log

age author description
2014-07-07 Jan Kanis stream output
2014-07-01 Jan Kanis improve warning messages
2014-07-01 Jan Kanis fix error
2014-07-01 Jan Kanis better warning message
2014-07-01 Jan Kanis add --db-config-dir switch to wrapper; update version number
2014-07-01 Jan Kanis look at all blast*.loc files; python2.6 compat fix
2014-06-30 Jan Kanis test new command line parameters, fix small bug
2014-06-30 Jan Kanis update tests
2014-06-30 Jan Kanis fix bug; add comments
2014-06-30 Jan Kanis implement configurable gene bank links
2014-06-24 Jan Kanis Backed out broken changeset 15b289ffdf2b
2014-06-24 Jan Kanis try to install lxml within setup_virtualenv (probably fails)
2014-06-24 Jan Kanis update to latest zlib, remove workaround for missing zlib env variable
2014-06-24 Jan Kanis fix LD_LIBRARY_PATH
2014-06-24 Jan Kanis add LIBRARY_PATH variable
2014-06-24 Jan Kanis add zlib dependency
2014-06-24 Jan Kanis merge py2.6 branch
2014-06-24 Jan Kanis (attempt to) get lxml install working py2.6
2014-06-24 Jan Kanis add missing dependencies py2.6
2014-06-24 Jan Kanis re-include backed out revisions and update version numbers py2.6
2014-06-24 Jan Kanis Backed out changesets 0b5819dc1478 and 3338571b44cd to create new release version
2014-06-23 Jan Kanis fix lxml version
2014-06-23 Jan Kanis first attempt at running on python 2.6
2014-06-19 Jan Kanis merge py2.6 branch
2014-06-19 Jan Kanis Close branch py2.6
2014-06-19 Jan Kanis remove unneeded encoding parameter py2.6
2014-06-19 Jan Kanis comment py2.6
2014-06-19 Jan Kanis update test output py2.6
2014-06-19 Jan Kanis Format all numbers in a predictable way py2.6
2014-06-18 Jan Kanis Fix rounding errors py2.6
2014-06-18 Jan Kanis fix escaping of javascript literals py2.6
2014-06-18 Jan Kanis First go at 2.6 compatibility py2.6
2014-06-18 Jan Kanis doc changes
2014-06-18 Jan Kanis refactor
2014-06-18 Jan Kanis Modify test data to include a negative frame sequence that is split in multiple lines
2014-06-18 Jan Kanis handle reverse matches
2014-06-18 Jan Kanis fix bug in calculations of alignment end
2014-06-17 Jan Kanis wrap alignments if they are too long
2014-06-04 Jan Kanis fix input format
2014-06-04 Jan Kanis depend on modified libxml2 that exports LD_LIBRARY_PATH
2014-06-03 Jan Kanis work around missing ld library path for libxml
2014-05-28 Jan Kanis depend on fixed python3
2014-05-28 Jan Kanis Undo including $ENV[PYTHONPATH] in PYTHONPATH
2014-05-28 Jan Kanis bump version
2014-05-28 Jan Kanis depend on latest python3, add $ENV[PYTHONPATH] to PYTHONPATH
2014-05-27 Jan Kanis update tests
2014-05-27 Jan Kanis set other environment variables as well
2014-05-26 Jan Kanis depend on new python3; set LD_LIBRARY_PATH
2014-05-26 Jan Kanis fix interpreter setting
2014-05-26 Jan Kanis fix depended repository name
2014-05-26 Jan Kanis add changeset revision in xml
2014-05-26 Jan Kanis depend on python 3; fix internal links with multiple iterations
2014-05-21 Jan Kanis minor fix
2014-05-21 Jan Kanis fix python 2 compatibility
2014-05-21 Jan Kanis unicodify python sources
2014-05-20 Jan Kanis debug action
2014-05-20 Jan Kanis fix prior_installation_required flag
2014-05-20 Jan Kanis add prior_installation_required flag
2014-05-20 Jan Kanis change tool_dependencies.xml
2014-05-20 Jan Kanis move dependency on blast_datatypes back to repository_dependencies.xml
2014-05-20 Jan Kanis add dependency on cython
2014-05-20 Jan Kanis another attempt at getting dependencies right
2014-05-19 Jan Kanis update version
2014-05-19 Jan Kanis more dependency updates, now including the python package dependencies
2014-05-19 Jan Kanis further update dependency information, hope it works now
2014-05-19 Jan Kanis update dependency
2014-05-19 Jan Kanis add repository dependency; add <stdio> tag; update version
2014-05-15 Jan Kanis add argparse dependency for python <2.7 and update version
2014-05-15 Jan Kanis add argparse dependency for python <2.7
2014-05-15 Jan Kanis fix tool xml file name
2014-05-15 Jan Kanis update version
2014-05-15 Jan Kanis add test update script, add url to github page
2014-05-15 Jan Kanis fix tests
2014-05-15 Jan Kanis rename NCBI reference example
2014-05-15 Jan Kanis remove unneeded files
2014-05-15 Jan Kanis reorganise to match galaxy tool shed layout
2014-05-15 Jan Kanis add blast2html.xml config setting
2014-05-15 Jan Kanis improve the galaxy html stripping warning; make sure the tool can find the template from within galaxy
2014-05-15 Jan Kanis add a warning if galaxy strips the html header/stylesheet
2014-05-15 Jan Kanis add more example xmls, move them to a subdirectory
2014-05-15 Jan Kanis use Iteration_message tag; also work with unexpected Hit_id values
2014-05-15 Jan Kanis fix sectioning, add footer
2014-05-15 Jan Kanis rename blast2html
2014-05-15 Jan Kanis style changes
2014-05-14 Jan Kanis Add index for multiple results; fix layout of query ruler for edge case
2014-05-13 Jan Kanis make it work with multiple queries
2014-05-13 Jan Kanis add a parameter for the template
2014-05-13 Jan Kanis make html more semantic
2014-05-13 Jan Kanis fix validation, reindent
2014-05-12 Jan Kanis minor update
2014-05-12 Jan Kanis small bugfixes (one for python 3.4)
2014-05-12 Jan Kanis renamed files
2014-05-12 Jan Kanis add links, refactor, proper commandline arguments
2014-05-12 Jan Kanis proper layout for alignments, added some links
2014-05-09 Jan Kanis All data is displayed now, still some formatting to do
2014-05-08 Jan Kanis fix descriptiontable width
2014-05-08 Jan Kanis div-ified graphics
2014-05-08 Jan Kanis intermediate commit before converting some tables to divs
2014-05-07 Jan Kanis slight update
2014-05-07 Jan Kanis first features are working, partial match table
2014-05-06 Jan Kanis trim everything that can be without breaking the graphics summary
2014-05-06 Jan Kanis undo trimming that broke the graphics summary
2014-05-06 Jan Kanis more trimming down
2014-05-06 Jan Kanis add trimmed down html example
2014-05-06 Jan Kanis add example input blast xml and output html page