# HG changeset patch # User jankanis # Date 1401110914 14400 # Node ID 59b33d253163b525d2b5e7a96d03473a7465ec72 # Parent 9dbfc4fcef0ae8527105acd4642f4f9848c5bc97 re-export LD_LIBRARY_PATH so that the required libraries can also be found at runtime diff -r 9dbfc4fcef0a -r 59b33d253163 tool_dependencies.xml --- a/tool_dependencies.xml Mon May 26 05:26:11 2014 -0400 +++ b/tool_dependencies.xml Mon May 26 09:28:34 2014 -0400 @@ -59,6 +59,7 @@ $INSTALL_DIR/bin + $ENV[LD_LIBRARY_PATH] $INSTALL_DIR @@ -68,9 +69,11 @@ - Python 3.4.1. Configured with the default settings, using --prefix=$INSTALL_DIR. + Python 3.4.1 - Python as of version 3.3 includes a built-in virtual environment manager. To create a python 3 virtual env, include the following actions in your tool_dependencies.xml: + This build of python is configured with --enable-loadable-sqlite-extensions and a --prefix, any other settings are default. This build does not include modules for lzma, Tkinter and dbm, but does include ssl, gdbm and sqlite. Adding the missing modules should not be very difficult but requires wrapping the external sources that these modules require inside galaxy. + + Python as of version 3.3 includes a built-in virtual environment manager. To create a python 3 virtual env, include the following actions in your tool_dependencies.xml: <action type="set_environment_for_install"> <repository name="python3" owner="jankanis">