Mercurial > repos > jaredgk > ppp_fourgamete
comparison four_gamete_wrapper.xml @ 8:885eb70b56ec draft default tip
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| author | jaredgk |
|---|---|
| date | Thu, 16 Jan 2020 17:17:32 -0500 |
| parents | 4a1d896591a2 |
| children |
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| 7:4a1d896591a2 | 8:885eb70b56ec |
|---|---|
| 7 <exit_code range="1:" level="fatal" /> | 7 <exit_code range="1:" level="fatal" /> |
| 8 </stdio> | 8 </stdio> |
| 9 <description>Tests a VCF file for a subregion that passes four gamete test</description> | 9 <description>Tests a VCF file for a subregion that passes four gamete test</description> |
| 10 <command> | 10 <command> |
| 11 <![CDATA[ | 11 <![CDATA[ |
| 12 $__tool_directory__/four_gamete.py | 12 four_gamete.py |
| 13 --vcfs $input | 13 --vcfs $input |
| 14 --out $output | 14 --out $output |
| 15 --4gcompat | 15 --4gcompat |
| 16 --reti | 16 --reti |
| 17 #if str($select_arg) == 'left': | 17 #if str($select_arg) == 'left': |