annotate MatrixEQTL/DESCRIPTION @ 4:cf4e9238644c draft default tip

Uploaded
author jasonxu
date Fri, 12 Mar 2021 08:23:32 +0000
parents cd4c8e4a4b5b
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
cd4c8e4a4b5b Uploaded
jasonxu
parents:
diff changeset
1 Package: MatrixEQTL
cd4c8e4a4b5b Uploaded
jasonxu
parents:
diff changeset
2 Type: Package
cd4c8e4a4b5b Uploaded
jasonxu
parents:
diff changeset
3 Title: Matrix eQTL: Ultra fast eQTL analysis via large matrix
cd4c8e4a4b5b Uploaded
jasonxu
parents:
diff changeset
4 operations
cd4c8e4a4b5b Uploaded
jasonxu
parents:
diff changeset
5 Version: 2.1.1
cd4c8e4a4b5b Uploaded
jasonxu
parents:
diff changeset
6 Date: 2014-02-24
cd4c8e4a4b5b Uploaded
jasonxu
parents:
diff changeset
7 Author: Andrey Shabalin
cd4c8e4a4b5b Uploaded
jasonxu
parents:
diff changeset
8 Maintainer: Andrey Shabalin <ashabalin@vcu.edu>
cd4c8e4a4b5b Uploaded
jasonxu
parents:
diff changeset
9 Description: Matrix eQTL is designed for fast eQTL analysis on large datasets.
cd4c8e4a4b5b Uploaded
jasonxu
parents:
diff changeset
10 Matrix eQTL can test for association between genotype and gene expression using linear regression
cd4c8e4a4b5b Uploaded
jasonxu
parents:
diff changeset
11 with either additive or ANOVA genotype effects.
cd4c8e4a4b5b Uploaded
jasonxu
parents:
diff changeset
12 The models can include covariates to account for factors
cd4c8e4a4b5b Uploaded
jasonxu
parents:
diff changeset
13 as population stratification, gender, and clinical variables.
cd4c8e4a4b5b Uploaded
jasonxu
parents:
diff changeset
14 It also supports models with heteroscedastic and/or correlated errors,
cd4c8e4a4b5b Uploaded
jasonxu
parents:
diff changeset
15 false discovery rate estimation and separate treatment of local (cis) and distant (trans) eQTLs.
cd4c8e4a4b5b Uploaded
jasonxu
parents:
diff changeset
16 License: LGPL-3
cd4c8e4a4b5b Uploaded
jasonxu
parents:
diff changeset
17 LazyLoad: yes
cd4c8e4a4b5b Uploaded
jasonxu
parents:
diff changeset
18 URL: http://www.bios.unc.edu/research/genomic_software/Matrix_eQTL/
cd4c8e4a4b5b Uploaded
jasonxu
parents:
diff changeset
19 Depends: R (>= 2.12.0), methods
cd4c8e4a4b5b Uploaded
jasonxu
parents:
diff changeset
20 Packaged: 2014-03-01 10:58:21 UTC; Andrey