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+++ b/MatrixEQTL/man/MatrixEQTL-package.Rd	Fri Mar 12 08:20:57 2021 +0000
@@ -0,0 +1,40 @@
+\name{MatrixEQTL-package}
+\alias{MatrixEQTL-package}
+\alias{MatrixEQTL}
+\docType{package}
+\title{
+	Matrix eQTL: Ultra fast eQTL analysis via large matrix operations
+}
+\description{
+	Matrix eQTL is designed for fast eQTL analysis of large datasets.
+	Matrix eQTL can test for association between genotype and gene expression using linear regression 
+	with either additive or ANOVA (additive and dominant) genotype effects.
+	The models can include covariates to account for such factors as population stratification, gender, clinical variables, and surrogate variables.
+       Matrix eQTL also supports models with heteroscedastic and/or correlated errors,
+	false discovery rate estimation and separate treatment of local (cis) and distant (trans) eQTLs.
+}
+\details{
+	\tabular{ll}{
+		Package: \tab MatrixEQTL\cr
+		Type: \tab Package\cr
+		Version: \tab 2.1.1\cr
+		Date: \tab 2014-02-24\cr
+		License: \tab LGPL-3 \cr
+		LazyLoad: \tab yes\cr
+		Depends: \tab methods\cr
+	}
+}
+\author{
+	Andrey Shabalin \email{ashabalin@vcu.edu}
+	
+	Maintainer: Andrey Shabalin <ashabalin@vcu.edu>
+}
+\references{
+	The package website: \url{http://www.bios.unc.edu/research/genomic_software/Matrix_eQTL/}
+}
+\keyword{ package }
+\keyword{ MatrixEQTL }
+\keyword{ Matrix eQTL }
+\seealso{
+	See \code{\link{Matrix_eQTL_engine}} for reference and sample code.
+}