diff MatrixEQTL/man/SNP.Rd @ 0:cd4c8e4a4b5b draft

Uploaded
author jasonxu
date Fri, 12 Mar 2021 08:12:46 +0000
parents
children
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/MatrixEQTL/man/SNP.Rd	Fri Mar 12 08:12:46 2021 +0000
@@ -0,0 +1,25 @@
+\name{SNP}
+\alias{SNP}
+\docType{data}
+\title{
+	Artificial data for Matrix eQTL sample code: Genotype.
+}
+\description{
+	Artificial data set with genotype information for 15 markers across 15 samples.
+	Columns of the file must match to those of the gene expression and covariates data sets.
+}
+\format{
+	\tabular{llll}{
+		snpnid  \tab Sam_01   \tab Sam_02 \tab \ldots \cr
+		Snp_01  \tab 2        \tab 0      \tab \ldots \cr
+		Snp_02  \tab 0        \tab 1      \tab \ldots \cr
+		\ldots  \tab \ldots   \tab \ldots \tab \ldots \cr
+	}
+}
+\references{
+	The package website: \url{http://www.bios.unc.edu/research/genomic_software/Matrix_eQTL/}
+}
+\seealso{
+	See \code{\link{Matrix_eQTL_engine}} for reference and sample code.
+}
+\keyword{datasets}