Mercurial > repos > jasper > pathoscope_id

diff test-data/pathoid-sam-report.tsv @ 0:15f6593183bb draft default tip

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author jasper
date Thu, 13 Apr 2017 16:08:52 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/pathoid-sam-report.tsv	Thu Apr 13 16:08:52 2017 -0400
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+Total Number of Aligned Reads:	631	Total Number of Mapped Genomes:	94
+Genome	Final Guess	Final Best Hit	Final Best Hit Read Numbers	Final High Confidence Hits	Final Low Confidence Hits	Initial Guess	Initial Best Hit	Initial Best Hit Read Numbers	Initial High Confidence Hits	Initial Low Confidence Hits
+ti|1133852|org|Escherichia_coli_O104:H4_str._2011C-3493	0.9998799888429474	0.9556259904912837	603.0	0.9556259904912837	0.0	0.13146705619421736	0.10916779465895717	68.88487842980197	0.006339144215530904	0.786053882725832
+ti|585056|org|Escherichia_coli_UMN026	0.00012000928042630206	0.012678288431061807	8.0	0.012678288431061807	0.0	0.017716885753233456	0.016752812054503935	10.571024406391983	0.003169572107765452	0.13946117274167988
+ti|216592|org|Escherichia_coli_042	1.4345706608387892e-09	0.001584786053882726	1.0	0.001584786053882726	0.0	0.0126954007672592	0.015566844775345218	9.822679053242833	0.001584786053882726	0.14263074484944532
+ti|585397|org|Escherichia_coli_ED1a	3.781442024903631e-10	0.003169572107765452	2.0	0.003169572107765452	0.0	0.008974785606443474	0.00594063253470086	3.748539129396243	0.001584786053882726	0.09984152139461172
+ti|562|org|Escherichia_coli	6.391140536448202e-11	0.022187004754358162	14.0	0.022187004754358162	0.0	0.017043186993988397	0.050515270994102725	31.875135997278818	0.022187004754358162	0.30269413629160064