Mercurial > repos > jay > gaiac_data_averaging_tool
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planemo upload for repository https://github.com/jaidevjoshi83/gaiac.git commit a733fec1915a1f6cf5f07092dc33426f765b6cb3-dirty
| author | jay |
|---|---|
| date | Thu, 15 May 2025 22:48:51 +0000 |
| parents | 0a9833d70961 |
| children | b5c6975c6033 |
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<tool id="gaiac_data_averaging_tool" name="GAIAC data averaging tool" version="0.1.0"> <description>Returns average values for time series data as per the selected time interval</description> <requirements> <requirement type="package" version="3.10">Python</requirement> <requirement type="package" version="2.2.5">numpy</requirement> <requirement type="package" version="2.2.3">pandas</requirement> </requirements> <stdio> <exit_code range="1" level="fatal" /> </stdio> <command detect_errors="exit_code"><![CDATA[ python '$__tool_directory__/dataaveraging.py' -I '$input1' -C '$Column' -O '$output' -T '$TimeInt' ]]></command> <inputs> <param name="input1" type="data" label="Input file" format="tabular" argument= "--InFile" help="Input csv data file."/> <param name="Column" type='data_column' data_ref="input1" label="Time Stamp column" argument="--dt_column" multiple="False" use_header_names="true" help="Class Label ex. 0 or 1"> <validator type="no_options" message="Please select any one column."/> </param> <param name="TimeInt" label="Time TimeInterval in minutes" type='text' value="10" argument="--TimeInterval" help="Name of the Column."/> </inputs> <outputs> <data name='output' format='tabular' label="Out.tsv" from_work_dir="out.tsv"/> </outputs> <tests> <test> <param name="input1" value="test.tsv"/> <param name="Column" value="1"/> <output name="output" file="out.tsv" ftype="tabular"/> </test> </tests> <help><![CDATA[ .. class:: infomark **What it does** This tool returns the file with averaged data based on the selected time interval in a time series data. ----- **Inputs** Data averaging tool * **--Input file** Input data frame as a tabular file. * **--Time stamp column** select the time stamp column in the dataset from the given list. * **--Time interval in minutes** provide the time interval in minutes for which data averaging is to be performed ----- **Outputs** * Returns file with averaged data based on the selected time interval]]></help> <citations> <citation type="bibtex"> @article{dubey2022, title={AirPiuG-Galaxy software platform based open-source GUI tools for data collection and analysis from low cost air pollution sensors}, author={Dubey, R and Joshi, J and Patra, A and Blankenberg, D}, journal={GitHub repository}, url = {https://github.com/ravishdubey/OPCN3API}, year={2022}, publisher={GitHub} } </citation> </citations> </tool>
