Mercurial > repos > jay > pdaug_basic_plots
annotate readme.md @ 9:15b6eec94c40 draft default tip
"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit d396d7ff89705cc0dd626ed32c45a9f4029b1b05"
| author | jay | 
|---|---|
| date | Wed, 12 Jan 2022 19:47:58 +0000 | 
| parents | 58a5249e47cb | 
| children | 
| rev | line source | 
|---|---|
| 
1
 
58a5249e47cb
"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
 
jay 
parents:  
diff
changeset
 | 
1 # PDAUG - a Galaxy based toolset for peptide library analysis, visualization, and machine learning modeling. | 
| 
 
58a5249e47cb
"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
 
jay 
parents:  
diff
changeset
 | 
2 | 
| 
 
58a5249e47cb
"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
 
jay 
parents:  
diff
changeset
 | 
3 ### Overview | 
| 
 
58a5249e47cb
"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
 
jay 
parents:  
diff
changeset
 | 
4 | 
| 
 
58a5249e47cb
"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
 
jay 
parents:  
diff
changeset
 | 
5 Peptide Design and Analysis Under Galaxy (PDAUG) package, a Galaxy based python powered collection of tools, workflows, and datasets for a rapid in-silico peptide library analysis. PDAUG offers tools for peptide library generation, data visualization, in-built and public database based peptide sequence retrieval, peptide feature calculation, and machine learning modeling. PDAUG tool suite can be downloaded and install through galaxy toolshed as a standard galaxy tool. | 
| 
 
58a5249e47cb
"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
 
jay 
parents:  
diff
changeset
 | 
6 | 
| 
 
58a5249e47cb
"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
 
jay 
parents:  
diff
changeset
 | 
7 | 
| 
 
58a5249e47cb
"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
 
jay 
parents:  
diff
changeset
 | 
8 # Prebuild Docker Image | 
| 
 
58a5249e47cb
"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
 
jay 
parents:  
diff
changeset
 | 
9 | 
| 
 
58a5249e47cb
"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
 
jay 
parents:  
diff
changeset
 | 
10 A prebuild build docker image based on the recent galaxy release can be obtained by the link below for a quick installation. | 
| 
 
58a5249e47cb
"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
 
jay 
parents:  
diff
changeset
 | 
11 | 
| 
 
58a5249e47cb
"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
 
jay 
parents:  
diff
changeset
 | 
12 - [Docker Image](https://github.com/jaidevjoshi83/docker_pdaug) | 
| 
 
58a5249e47cb
"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
 
jay 
parents:  
diff
changeset
 | 
13 | 
| 
 
58a5249e47cb
"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
 
jay 
parents:  
diff
changeset
 | 
14 # Contributors | 
| 
 
58a5249e47cb
"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
 
jay 
parents:  
diff
changeset
 | 
15 - Jayadev Joshi | 
| 
 
58a5249e47cb
"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
 
jay 
parents:  
diff
changeset
 | 
16 | 
| 
 
58a5249e47cb
"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
 
jay 
parents:  
diff
changeset
 | 
17 - Daniel Blankenberg | 
| 
 
58a5249e47cb
"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
 
jay 
parents:  
diff
changeset
 | 
18 | 
| 
 
58a5249e47cb
"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
 
jay 
parents:  
diff
changeset
 | 
19 # History | 
| 
 
58a5249e47cb
"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
 
jay 
parents:  
diff
changeset
 | 
20 | 
| 
 
58a5249e47cb
"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
 
jay 
parents:  
diff
changeset
 | 
21 - 0.1.0: First release! | 
| 
 
58a5249e47cb
"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
 
jay 
parents:  
diff
changeset
 | 
22 | 
| 
 
58a5249e47cb
"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
 
jay 
parents:  
diff
changeset
 | 
23 # Support & Bug Reports | 
| 
 
58a5249e47cb
"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
 
jay 
parents:  
diff
changeset
 | 
24 | 
| 
 
58a5249e47cb
"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
 
jay 
parents:  
diff
changeset
 | 
25 You can file an [github issue](https://github.com/jaidevjoshi83/docker_pdaug/issues). | 
