# HG changeset patch # User jay # Date 1641704173 0 # Node ID c8cb2baa4e6f09c0a7732ca2adb7134e15cfa9cf # Parent 8697dc4a7f45d083ae37c0c4b9b425c29609a6ac "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 32b9c48c81639a81be24bb3e2f48dc0a81c0deca" diff -r 8697dc4a7f45 -r c8cb2baa4e6f PDAUG_Peptide_Core_Functions/PDAUG_Peptide_Core_Functions.py --- a/PDAUG_Peptide_Core_Functions/PDAUG_Peptide_Core_Functions.py Sun Jan 31 02:43:58 2021 +0000 +++ b/PDAUG_Peptide_Core_Functions/PDAUG_Peptide_Core_Functions.py Sun Jan 09 04:56:13 2022 +0000 @@ -16,12 +16,12 @@ filterduplicates = subparsers.add_parser('filterduplicates') filterduplicates.add_argument("-I","--InFile", required=True, default=None, help="Input file") filterduplicates.add_argument("-F","--FastOut", required=False, default='Out.fasta', help="Output file") - +filterduplicates.add_argument("-A","--FilterAA", required=True, default=None, help="Filter amino acide") keepnaturalaa = subparsers.add_parser('keepnaturalaa') keepnaturalaa.add_argument("-I","--InFile", required=True, default=None, help="Inputt file") keepnaturalaa.add_argument("-F","--FastOut", required=False, default='Out.fasta', help="Output file") - +keepnaturalaa.add_argument("-A","--FilterAA", required=True, default=None, help="Filter amino acide") filteraa = subparsers.add_parser('filteraa') filteraa.add_argument("-I","--InFile", required=True, default=None, help="Input file")