comparison PDAUG_Peptide_Ngrams/test-data/test1.fasta @ 0:3f9bdcf83244 draft

"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit a9bd83f6a1afa6338cb6e4358b63ebff5bed155e"
author jay
date Wed, 28 Oct 2020 02:02:04 +0000
parents
children
comparison
equal deleted inserted replaced
-1:000000000000 0:3f9bdcf83244
1 >ACP0
2 GLWSKIKEVGKEAAKAAAKAAGKAALGAVSEAV
3 >ACP2
4 GLFDIIKKIAESI
5 >ACP4
6 GLLDIVKKVVGAFGSL
7 >ACP6
8 GLFDIVKKVVGALGSL
9 >ACP8
10 GLFDIVKKVVGTLAGL
11 >ACP10
12 GLFDIAKKVIGVIGSL
13 >ACP12
14 GLFDIVKKIAGHIAGSI
15 >ACP14
16 GLFDIVKKIAGHIVSSI
17 >ACP16
18 AACARFIDDFCDTLTPNIYRPRDNGQRCYAVNGHRCDFTVFNTNNGGNPIRASTPNCKTVLRTAANRCPTGGRGKINPNAPFLFAIDPNDGDCSTNF
19 >ACP18
20 HGVSGHGQHGVHG
21 >ACP20
22 FKCRRWQWRMKKLGAPSITCVRRAF
23 >ACP22
24 KWKLFKKIKFLHSAKKF
25 >ACP24
26 KSSAYSLQMGATAIKQVKKLFKKWGW
27 >ACP26
28 GIGTKILGGVKTALKGALKELASTYAN
29 >ACP28
30 GIGGKILSGLKTALKGAAKELASTYLH
31 >ACP30
32 GIGGVLLSAGKAALKGLAKVLAEKYAN
33 >ACP32
34 SIGAKILGGVKTFFKGALKELASTYLQ
35 >ACP34
36 FLPLLAGLAANFLPTIICKISYKC
37 >ACP36
38 FVQWFSKFLGRIL
39 >ACP38
40 KWKIFKKIEKVGRNIRNGIIKAGPAVAVLGEAKAL
41 >ACP40
42 GWLKKIGKKIERVGQHTRDATIQTIGVAQQAANVAATLK
43 >ACP42
44 KWKLFKKIEKVGQNIRDGIIKAGPAVAVVGQATQIAK
45 >ACP44
46 SQLGDLGSGAGQGGGGGGSIRAAGGAFGKLEAAREEEFFYKKQKEQLERLKNDQIHQAEFHHQQIKEHEEAIQRHKDFLNNLHK
47 >ACP46
48 GIGKFLHSAKKFGKAFVGEIMNS
49 >ACP48
50 GIGAVLKVLTTGLPALISWIKRKRQQ
51 >ACP50
52 ALWKNMLKGIGKLAGQAALGAVKTLVGAE
53 >ACP52
54 ACYCRIPACIAGERRYGTCIYQGRLWAFCC
55 >ACP54
56 ECRRLCYKQRCVTYCRGR
57 >ACP56
58 LKLKSIVSWAKKVL
59 >ACP58
60 KWCFRVCYRGICYRRCR
61 >ACP60
62 KSCCRNTWARNCYNVCRLPGTISREICAKKCDCKIISGTTCPSDYPK
63 >ACP62
64 GLLSVLGSVAKHVLPHVVPVIAEHL
65 >ACP64
66 GLLSVLGSVVKHVIPHVVPVIAEHL
67 >ACP66
68 GLFKVLGSVAKHLLPHVAPVIAEK
69 >ACP68
70 GLFGVLGSIAKHVLPHVVPVIAEK
71 >ACP70
72 GLFVGVLAKVAAHVVPAIAEHF
73 >ACP72
74 GLFVGLAKVAAHNNPAIAEHFQA
75 >ACP74
76 GFVDFLKKVAGTIANVVT
77 >ACP76
78 GLLQTIKEKLESLESLAKGIVSGIQA
79 >ACP78
80 TRSSRAGLQFPVGRVHRLLRK
81 >ACP80
82 FFGWLIKGAIHAGKAIHGLIHRRRH
83 >ACP82
84 GLFDVIKKVASVIGGL
85 >ACP84
86 GLFDIIKKVASVVGGL
87 >ACP86
88 GRFKRFRKKFKKLFKKLSPVIPLLHLG
89 >ACP88
90 GGLRSLGRKILRAWKKYGPIIVPIIRIG
91 >ACP90
92 RRRPRPPYLPRPRPPPFFPPRLPPRIPPGFPPRFPPRFP
93 >ACP92
94 GLLGPLLKIAAKVGSNLL
95 >ACP94
96 GLICESCRKIIQKLEDMVGPQPNEDTVTQAASQVCDKLKILRGLCKKIMRSFLRRISWDILTGKKPQAICVDIKICKEKTGLI
97 >ACP96
98 DHYNCVSSGGQCLYSACPIFTKIQGTCYRGKAKCCK
99 >ACP98
100 FFHHIFRGIVHVGKTIHRLVTG
101 >ACP100
102 KLAKLAKKLAKLAK
103 >ACP102
104 KTCENLADTFRGPCFATSNC
105 >ACP104
106 IDWKKLLDAAKQIL
107 >ACP106
108 FLIGMTQGLICLITRKC
109 >ACP108
110 ILPILSLIGGLLGK
111 >ACP110
112 GLLGLLGSVVSHVVPAIVGHF
113 >ACP112
114 GLLGLLGSVVSHVLPAITQHL
115 >ACP114
116 GIKCRFCCGCCTPGICGVCCRF
117 >ACP116
118 QSHLSLCRWCCNCCRSNKGC
119 >ACP118
120 ILGPVISTIGGVLGGLLKNL
121 >ACP120
122 FLPILASLAAKFGPKLFCLVTKKC
123 >ACP122
124 GLWSKIKEAAKAAGKAALNAVTGLVNQGDQPS
125 >ACP124
126 LLGMIPLAISAISALSKL
127 >ACP126
128 GLPVCGETCVGGTCNTPGCSCSWPVCTRN
129 >ACP128
130 GVPICGETCTLGTCYTAGCSCSWPVCTRN
131 >ACP130
132 GIPCGESCVWIPCISSAIGCSCKSKVCYRN
133 >ACP132
134 GIPCAESCVWIPCTVTALIGCGCSNKVCYN
135 >ACP134
136 GTFPCGESCVFIPCLTSAIGCSCKSKVCYKN
137 >ACP136
138 GLLPCAESCVYIPCLTTVIGCSCKSKVCYKN
139 >ACP138
140 GRDYRTCLTIVQKLKKMVDKPTQRSVSNAATRVCRTGRSRWRDVCRNFMRRYQSRVTQGLVAGETAQQICEDLRLCIPSTGPL
141 >ACP140
142 GETDPNTQLLNDLGNNMAWGAALGAPGGLGSAALGAAGGALQTVGQGLIDHGPVNVFIPVLIGPSWNGSGSGYNSATSSSGSGS
143 >ACP142
144 GFKDLLKGAAKALVKTVLF
145 >ACP144
146 KSCCPNTTGRNIYNACRLTGAPRPTCAKLSGCKIISGSTCPSDYPK
147 >ACP146
148 KSCCPNTTGRNIYNTCRFGGGSREVCARISGCKIISASTCPSDYPK
149 >ACP148
150 KSCCPNTTGRNIYNTCRLTGSSRETCAKLSGCKIISASTCPSNYPK
151 >ACP150
152 MRKEFHNVLSSGQLLADKRPARDYNRK
153 >ACP152
154 KSCCKNTTGRNIYNTCRFAGGSRERCAKLSGCKIISASTCPSDYPK
155 >ACP154
156 FIFHIIKGLFHAGKMIHGLVTRRRH
157 >ACP156
158 FLPAIVGAAAKFLPKIFCAISKKC
159 >ACP158
160 FLPIIAGVAAKVLPKIFCAISKKC
161 >ACP160
162 FLPIIAGIAAKFLPKIFCTISKKC
163 >ACP162
164 FLPVIAGVAANFLPKLFCAISKKC
165 >ACP164
166 FLPIIAGAAAKVVQKIFCAISKKC
167 >ACP166
168 GLMDTIKGVAKTVAASWLDKLKCKITGC
169 >ACP168
170 VNWKKVLGKIIKVAK
171 >ACP170
172 VNWKKILGKIIKVAK
173 >ACP172
174 FFSLLPSLIGGLVSAIK
175 >ACP174
176 RFRLPFRRPPIRIHPPPFYPPFRRFL
177 >ACP176
178 KWKLFKKIPKFLHLAKKF
179 >ACP178
180 YKQCHKKGGHCFPKEKICLPPSSDFGKMDCRWRWKCCKKGSG
181 >ACP180
182 GIPCGESCVFIPCITGAIGCSCKSKVCYRN
183 >ACP182
184 GEFLKCGESCVQGECYTPGCSCDWPICKKN
185 >ACP184
186 GLPTCGETCTLGTCYVPDCSCSWPICMKN
187 >ACP186
188 GLPVCGETCFGGTCNTPGCTCDPWPVCTRN
189 >ACP188
190 FVDLKKIANIINSIFGK
191 >ACP190
192 GSIPCGESCVFIPCISSVIGCACKSKVCYKN
193 >ACP192
194 GIPCGESCVFIPCISSVIGCSCSSKVCYRN
195 >ACP194
196 GSIPCGESCVFIPCISAVIGCSCSNKVCYKN
197 >ACP196
198 GSIPCEGSCVFIPCISAIIGCSCSNKVCYKN
199 >ACP198
200 GIPCGESCVFIPCLTSAIDCSCKSKVCYRN
201 >ACP200
202 GMWSKILGHLIR
203 >ACP202
204 GKWMSLLKHILK
205 >ACP204
206 GFGMALKLLKKVL
207 >ACP206
208 GTGLPMSERRKIMLMMR
209 >ACP208
210 GIACGESCVFLGCFIPGCSCKSKVCYFN
211 >ACP210
212 GVIPCGESCVFIPCISSVLGCSCKNKVCYRD
213 >ACP212
214 KLCGETCFKFKCYTPGCSCSYPFCK
215 >ACP214
216 GDACGETCFTGICFTAGCSCNPWPTCTRN
217 >ACP216
218 GIPCAESCVWIPPCTITALMGCSCKNNVCYNN
219 >ACP218
220 IPCGESCVWIPCITAIAGCSCKNKVCYT
221 >ACP220
222 AIPCGESCVWIPCISTVIGCSCSNKVCYR
223 >ACP222
224 GEYCGESCYLIPCFTPGCYCVSRQCVNKN
225 >ACP224
226 IPCGESCVWIPCISGMFGCSCKDKVCYS
227 >ACP226
228 FLGWLFKWASK
229 >ACP228
230 FLKWLFKWAKK
231 >ACP230
232 KWKSFLKTFKSAKKTVLHTALKAISS
233 >ACP232
234 KWKSFLKTFKSLKKTVLHTLLKAISS
235 >ACP234
236 MPFLFCNVNDVCNFASRNDYSCNYYSNSYSFWLASLNPER
237 >ACP236
238 KWKLFKKIGAVLKVL
239 >ACP238
240 GACFSIAHECGA
241 >ACP240
242 TCCATGACGTTCCTGACGTT
243 >ACP242
244 KRFKQDGGASHASPASS
245 >ACP244
246 KRAKAAGGWSHWSPWSSC
247 >ACP246
248 LLGDFFRKSKEKIGKEFKRIVQRIKDFLRNLVPRTES
249 >ACP248
250 FLGALFKVASKVLPSVKCAITKKC
251 >ACP250
252 GIGKFLKKAKKFGKAFVKILKK
253 >ACP252
254 GIGKFLKKAKKGIGAVLKVLTTGL
255 >ACP254
256 VECYGPNRPQF
257 >ACP256
258 KRFKQDGGWSHWSPWSSC
259 >ACP258
260 RQVFQVAYIIIKA
261 >ACP260
262 KAFDITYVRLKF
263 >ACP262
264 DFKLFAVTIKYR
265 >ACP264
266 DFKLFAVYIKYR
267 >ACP266
268 WHSDMEWWYLLG
269 >ACP268
270 HTMYYHHYQHHL
271 >ACP270
272 RLVSYNGIIFFLK
273 >ACP272
274 GRENYHGCTTHWGFTLC
275 >ACP274
276 ASSSYPLIHWRPWAR