# HG changeset patch # User jay # Date 1641699703 0 # Node ID 1fafae68b9bbc3af262a04eed743a64393ce9bc1 # Parent 9012052b1dade284d2f3abf41721939d0bcdc80b "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 32b9c48c81639a81be24bb3e2f48dc0a81c0deca" diff -r 9012052b1dad -r 1fafae68b9bb PDAUG_Peptide_Core_Functions/PDAUG_Peptide_Core_Functions.py --- a/PDAUG_Peptide_Core_Functions/PDAUG_Peptide_Core_Functions.py Sun Jan 31 02:00:07 2021 +0000 +++ b/PDAUG_Peptide_Core_Functions/PDAUG_Peptide_Core_Functions.py Sun Jan 09 03:41:43 2022 +0000 @@ -16,12 +16,12 @@ filterduplicates = subparsers.add_parser('filterduplicates') filterduplicates.add_argument("-I","--InFile", required=True, default=None, help="Input file") filterduplicates.add_argument("-F","--FastOut", required=False, default='Out.fasta', help="Output file") - +filterduplicates.add_argument("-A","--FilterAA", required=True, default=None, help="Filter amino acide") keepnaturalaa = subparsers.add_parser('keepnaturalaa') keepnaturalaa.add_argument("-I","--InFile", required=True, default=None, help="Inputt file") keepnaturalaa.add_argument("-F","--FastOut", required=False, default='Out.fasta', help="Output file") - +keepnaturalaa.add_argument("-A","--FilterAA", required=True, default=None, help="Filter amino acide") filteraa = subparsers.add_parser('filteraa') filteraa.add_argument("-I","--InFile", required=True, default=None, help="Input file")