# HG changeset patch
# User jbarberoaparicio
# Date 1555494869 14400
# Node ID 0d73c38f61b3fac6ab16e6438e4269a9f3c3b0ca
# Parent  9c482532a3e0856d885b21b8f8d49ee74e5f6d87
Uploaded

diff -r 9c482532a3e0 -r 0d73c38f61b3 roary/myTools/roary_tool.xml
--- a/roary/myTools/roary_tool.xml	Wed Apr 17 05:51:25 2019 -0400
+++ b/roary/myTools/roary_tool.xml	Wed Apr 17 05:54:29 2019 -0400
@@ -7,7 +7,10 @@
     
     <command detect_errors="exit_code"><![CDATA[
         
-               
+        #for $counter, $gff in enumerate($gff_input.gffs)
+          cp $gff ${gff}.gff &&
+        #end for
+                
         roary
           -f out 
           -p \${GALAXY_SLOTS:-1}