Mercurial > repos > jeremie > package_pindel_0_2_5
comparison tool_dependencies.xml @ 13:b77ffd27beda draft
Uploaded
author | jeremie |
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date | Thu, 19 Jun 2014 10:26:02 -0400 |
parents | 4a11086ede4b |
children | 9d540c67d888 |
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12:4a11086ede4b | 13:b77ffd27beda |
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12 <action type="move_directory_files"> | 12 <action type="move_directory_files"> |
13 <source_directory>.</source_directory> | 13 <source_directory>.</source_directory> |
14 <destination_directory>$INSTALL_DIR</destination_directory> | 14 <destination_directory>$INSTALL_DIR</destination_directory> |
15 </action> | 15 </action> |
16 <action type="shell_command">unzip pindel-master.zip -d pindel</action> | 16 <action type="shell_command">unzip pindel-master.zip -d pindel</action> |
17 <action type="shell_command">cd master</action> | 17 <action type="shell_command">cd master</action> --> |
18 <action type="shell_command">make SAMTOOLS=~/samtools</action> --> | 18 <action type="shell_command">make SAMTOOLS=~/samtools</action> |
19 <action type="shell_command">./INSTALL ~/samtools</action> | 19 <!-- <action type="shell_command">./INSTALL ~/samtools</action> --> |
20 <action type="move_file"> | 20 <action type="move_file"> |
21 <source>pindel</source> | 21 <source>pindel</source> |
22 <destination>$INSTALL_DIR/</destination> | 22 <destination>$INSTALL_DIR/</destination> |
23 </action> | 23 </action> |
24 <action type="set_environment"> | 24 <action type="set_environment"> |