Mercurial > repos > jeremie > package_pindel_0_2_5

diff tool_dependencies.xml @ 20:14facf79b652 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author jeremie
date Fri, 20 Jun 2014 04:52:48 -0400
parents c483e3d493f0
children 7b71d14e0f78
line wrap: on
line diff
--- a/tool_dependencies.xml	Fri Jun 20 04:47:38 2014 -0400
+++ b/tool_dependencies.xml	Fri Jun 20 04:52:48 2014 -0400
@@ -19,8 +19,8 @@
 				<action type="shell_command">unzip pindel-master.zip -d pindel</action>
 				<action type="shell_command">cd master</action> -->
 				<action type="shell_command">sed '50d' Makefile</action>
-				<action type="shell_command">make Makefile.local</action>
-				<action type="shell_command">make all SAMTOOLS=~/samtools THREADS=2</action>
+				<!-- <action type="shell_command">make Makefile.local</action> -->
+				<action type="shell_command">make SAMTOOLS=~/samtools THREADS=2</action>
 				<!-- <action type="shell_command">./INSTALL ~/samtools</action>  -->
 				<action type="move_file">
 					<source>pindel</source>