# HG changeset patch
# User jeremie
# Date 1403254368 14400
# Node ID 14facf79b652a607293450c2b402d2f0adc59c58
# Parent  c483e3d493f0bc0778aa53667957502bb05990e2
Uploaded

diff -r c483e3d493f0 -r 14facf79b652 tool_dependencies.xml
--- a/tool_dependencies.xml	Fri Jun 20 04:47:38 2014 -0400
+++ b/tool_dependencies.xml	Fri Jun 20 04:52:48 2014 -0400
@@ -19,8 +19,8 @@
 				<action type="shell_command">unzip pindel-master.zip -d pindel</action>
 				<action type="shell_command">cd master</action> -->
 				<action type="shell_command">sed '50d' Makefile</action>
-				<action type="shell_command">make Makefile.local</action>
-				<action type="shell_command">make all SAMTOOLS=~/samtools THREADS=2</action>
+				<!-- <action type="shell_command">make Makefile.local</action> -->
+				<action type="shell_command">make SAMTOOLS=~/samtools THREADS=2</action>
 				<!-- <action type="shell_command">./INSTALL ~/samtools</action>  -->
 				<action type="move_file">
 					<source>pindel</source>