# HG changeset patch
# User jeremie
# Date 1403183128 14400
# Node ID ecb9358199d11790f6c92dd2bd748a8e041fcea2
# Parent  754f6ec017f79fd1492a5093be9a15198fff1f16
Deleted selected files

diff -r 754f6ec017f7 -r ecb9358199d1 tool_dependencies.xml
--- a/tool_dependencies.xml	Thu Jun 19 08:56:14 2014 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,21 +0,0 @@
-<?xml version="1.0"?>
-<tool_dependency>
-	<package name="samtools" version="0.1.18">
-		<repository changeset_revision="171cd8bc208d" name="package_samtools_0_1_18" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" />
-	</package>
-	<package name="pindel" version="0.2.5">
-		<install version="1.0">
-			<actions>
-				<action type="download_by_url">https://github.com/genome/pindel/archive/master.zip</action>
-				<action type="shell_command">unzip pindel-master.zip -d pindel</action>
-				<action type="shell_command">cd pindel</action>
-				<action type="shell_command">make SAMTOOLS=~/samtools</action>
-				<action type="set_environment">
-					<environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
-				</action>
-			</actions>
-		</install>
-		<readme>
-		</readme>
-	</package>
-</tool_dependency>