--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data_manager/data_manager_fetch_motifs.xml	Sat May 16 17:23:06 2015 -0400
@@ -0,0 +1,26 @@
+<tool id="data_manager_fetch_motifs" name="Install Motif Database" version="1.0.0" tool_type="manage_data">
+    <description>Downloads motif databases in tabix format for use with region_motif_enrichment</description>
+    <command interpreter="python">data_manager_fetch_motifs.py "${out_file}" --motif_db ${motif_db_selector}</command>
+    <inputs>
+        <param name="motif_db_selector" type="select" label="Choose the source for the motif db">
+            <option value="test" selected="True">Test Encode Motifs (hg19)</option>
+            <option value="encode">Encode Motifs (hg19)</option>
+            <option value="jaspar">Jaspar and Jolma Motifs (hg19)</option>
+            <option value="mouse">Mouse Motifs (mm9)</option>
+        </param>
+    </inputs>
+    <outputs>
+        <data name="out_file" format="data_manager_json"/>
+    </outputs>
+    <help>
+        **What it does**
+
+        Fetches a reference motif database (bgz and tbi files) from Harvard
+        CBMI source and populates the "motif_databases" data table.
+
+        **TO DO**
+        
+        Ability to add motif database from local file, as the last step in 
+        a MEME pipeline.
+    </help>
+</tool>