Mercurial > repos > jetbrains > span
diff tool_dependencies.xml @ 0:1f0c4f0a9c3b draft
Initial version of SPAN for ToolShed
author | jetbrains |
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date | Thu, 15 Nov 2018 11:04:49 -0500 |
parents | |
children | dfb1e66235c5 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Thu Nov 15 11:04:49 2018 -0500 @@ -0,0 +1,25 @@ +<?xml version="1.0"?> +<tool_dependency> + <!-- + Package for downloading latest successful development tools. + https://galaxyproject.org/toolshed/tool-dependencies-tag-sets/ + --> + <package name="package_span_jar" version="0.7.1.4272" prior_installation_required="True"> + <install version="1.0"> + <actions> + <action type="download_by_url">https://download.jetbrains.com/biolabs/span/span-0.7.1.4272.jar</action> + <action type="move_directory_files"> + <source_directory>.</source_directory> + <destination_directory>$INSTALL_DIR/</destination_directory> + </action> + <!-- Set environment variable $INTEGRATION_JAR so Python script knows where to look --> + <action type="set_environment"> + <environment_variable name="$SPAN_JAR" action="set_to">$INSTALL_DIR/span-0.7.1.4272.jar</environment_variable> + </action> + </actions> + </install> + <readme> + Downloads SPAN Semi-supervised Peak Analyzer jar distribution file. + </readme> + </package> +</tool_dependency>