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comparison zinbra.xml @ 1:8cbb06892b62

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Release version: https://github.com/JetBrains-Research/galaxy/commit/a138a0b8f1d471d464a09a95daf5791f41fa0ec5
author Oleg Shpynov <oleg.shpynov@gmail.com>
date Wed, 28 Oct 2015 11:28:49 +0300
parents 5f97f28e65ca
children 0eb50728861a
comparison
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0:5f97f28e65ca 1:8cbb06892b62
11 <command interpreter="python"> 11 <command interpreter="python">
12 zinbra.py "${genome}" "${bed}" "${bin}" "${fdr}" 12 zinbra.py "${genome}" "${bed}" "${bin}" "${fdr}"
13 </command> 13 </command>
14 <inputs> 14 <inputs>
15 <param name="bed" type="data" format="bed" label="Aligned reads" description="BED Aligned reads to process" /> 15 <param name="bed" type="data" format="bed" label="Aligned reads" description="BED Aligned reads to process" />
16 <param name="genome" type="genomebuild" label="Genome build" description="Genome build used for alignment" /> 16 <param name="genome" type="data" format="fasta" label="Genome build" description="Genome build reference" />
17 <param name="bin" size="5" type="integer" value="200" label="Bin size" /> 17 <param name="bin" size="5" type="integer" value="200" label="Bin size" />
18 <param name="fdr" size="5" type="float" value="0.0001" label="FDR" /> 18 <param name="fdr" size="5" type="float" value="0.0001" label="FDR" />
19 </inputs> 19 </inputs>
20 <outputs> 20 <outputs>
21 <data name="result" format="bed" label="result.bed" /> 21 <data name="result" format="bed" label="result.bed" />
22 </outputs> 22 </outputs>
23 <help> 23 <help>
24 Zinbra is a tool for analyzing and comparing ChIP-Seq data using Zero Inflated Negative Binomial Restricted Algorithm. 24 Zinbra is a tool for analyzing and comparing ChIP-Seq data using Zero Inflated Negative Binomial Restricted Algorithm.
25 https://github.com/JetBrains-Research/zinbra
25 </help> 26 </help>
26 </tool> 27 </tool>