Mercurial > repos > jetbrains > zinbra
diff README.md @ 1:8cbb06892b62
Release version:
https://github.com/JetBrains-Research/galaxy/commit/a138a0b8f1d471d464a09a95daf5791f41fa0ec5
author | Oleg Shpynov <oleg.shpynov@gmail.com> |
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date | Wed, 28 Oct 2015 11:28:49 +0300 |
parents | 5f97f28e65ca |
children | d76a6b6398d4 |
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--- a/README.md Tue Oct 27 14:20:42 2015 +0300 +++ b/README.md Wed Oct 28 11:28:49 2015 +0300 @@ -1,41 +1,7 @@ -Galaxy Applications -================= - -Quick setup ------------- +Release version +=============== +https://github.com/JetBrains-Research/galaxy/commit/a138a0b8f1d471d464a09a95daf5791f41fa0ec5 -* Download local copy of [galaxy](https://wiki.galaxyproject.org/Admin/GetGalaxy) -* Checkout latest release: `git checkout release_15.01` -* Create `config/galaxy.ini` as a copy of `config/galaxy.ini.sample` -* Configure `tools_config_file`, `check_migrate_tools` properties -* Minimal `tool_conf.xml` -``` - <?xml version='1.0' encoding='utf-8'?> - <toolbox> - <section id="getext" name="Get Data"> - <tool file="data_source/upload.xml" /> - <tool file="data_source/ucsc_tablebrowser.xml" /> - <tool file="data_source/ebi_sra.xml" /> - <tool file="data_source/biomart.xml" /> - </section> - <section id="jetbrains" name="JetBrains tools"> - <tool file="<PATH_TO_TOOLS>tools.xml" /> - </section> - </toolbox> -``` - -Useful links ------------- -* Galaxy - * [Develop apps](https://wiki.galaxyproject.org/Develop) - * [Add tool tutorial](https://wiki.galaxyproject.org/Admin/Tools/AddToolTutorial) - * [Tool config format](https://wiki.galaxyproject.org/Admin/Tools/ToolConfigSyntax) - * [Quick reStructured text](http://docutils.sourceforge.net/docs/user/rst/quickref.html) - * [Main tools Shed resource](https://toolshed.g2.bx.psu.edu/repository) - * [Bed tools Shed example](https://github.com/galaxyproject/tools-iuc/blob/master/packages/package_bedtools_2_24/tool_dependencies.xml) - * [Biostar Galaxy](https://biostar.usegalaxy.org) -* Biolabs - * Our [homepage](http://beta-research.jetbrains.org/groups/biolabs) - * Our [wiki](http://biolabs.intellij.net) - * Our NIH powered [genome browser](http://genomebrowser.labs.intellij.net) - * [TeamCity](https://teamcity.jetbrains.com/project.html?projectId=Epigenome) +NOTE +---- +Release is just a snapshot of files from development repo application folder.