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1 <?xml version="1.0" encoding="UTF-8"?>
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2
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3 <?import javafx.scene.text.*?>
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4 <?import javafx.geometry.*?>
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5 <?import java.lang.*?>
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6 <?import java.util.*?>
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7 <?import javafx.scene.*?>
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8 <?import javafx.scene.control.*?>
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9 <?import javafx.scene.layout.*?>
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10
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11 <VBox id="containerAll" maxHeight="-Infinity" maxWidth="-Infinity" minHeight="-Infinity" minWidth="-Infinity" prefHeight="400.0" prefWidth="600.0" xmlns="http://javafx.com/javafx/8" xmlns:fx="http://javafx.com/fxml/1" fx:controller="kinamine.KinaMineGUIController">
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12 <children>
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13 <MenuBar id="menuBar">
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14 <menus>
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15 <Menu mnemonicParsing="false" text="File">
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16 <items>
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17 <MenuItem mnemonicParsing="false" text="Close" />
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18 </items>
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19 </Menu>
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20 <Menu mnemonicParsing="false" text="Edit">
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21 <items>
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22 <MenuItem mnemonicParsing="false" text="Delete" />
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23 </items>
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24 </Menu>
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25 <Menu mnemonicParsing="false" text="Help">
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26 <items>
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27 <MenuItem mnemonicParsing="false" text="About" />
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28 </items>
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29 </Menu>
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30 </menus>
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31 </MenuBar>
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32 <HBox id="pepHBox" spacing="10.0">
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33 <children>
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34 <Label id="pepLabel" prefHeight="17.0" prefWidth="120.0" text="Peptide Report:" textAlignment="CENTER" underline="true">
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35 <HBox.margin>
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36 <Insets />
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37 </HBox.margin>
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38 <padding>
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39 <Insets left="10.0" right="10.0" />
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40 </padding>
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41 <font>
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42 <Font size="13.0" />
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43 </font>
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44 </Label>
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45 <TextField fx:id="pepPath" HBox.hgrow="ALWAYS" />
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46 <Button fx:id="pepSearchButton" mnemonicParsing="false" onAction="#pepSearchClicked" text="...">
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47 <opaqueInsets>
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48 <Insets />
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49 </opaqueInsets>
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50 </Button>
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51 </children>
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52 <opaqueInsets>
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53 <Insets bottom="10.0" left="10.0" right="10.0" top="10.0" />
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54 </opaqueInsets>
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55 <VBox.margin>
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56 <Insets bottom="5.0" left="10.0" right="10.0" top="10.0" />
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57 </VBox.margin>
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58 </HBox>
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59 <HBox id="fastaHBox" layoutX="10.0" layoutY="35.0" spacing="10.0">
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60 <children>
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61 <Label id="fastaLabel" prefWidth="120.0" text="FASTA Database:" textAlignment="CENTER" underline="true">
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62 <HBox.margin>
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63 <Insets />
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64 </HBox.margin>
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65 <padding>
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66 <Insets left="10.0" right="10.0" />
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67 </padding>
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68 <font>
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69 <Font size="13.0" />
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70 </font>
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71 </Label>
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72 <TextField fx:id="fastaPath" HBox.hgrow="ALWAYS" />
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73 <Button id="fastaSearchButton" mnemonicParsing="false" onAction="#fastaSearchClicked" text="..." />
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74 </children>
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75 <opaqueInsets>
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76 <Insets bottom="10.0" left="10.0" right="10.0" top="10.0" />
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77 </opaqueInsets>
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78 <VBox.margin>
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79 <Insets bottom="5.0" left="10.0" right="10.0" top="5.0" />
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80 </VBox.margin>
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81 </HBox>
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82 <HBox id="fdrHBox" layoutX="10.0" layoutY="35.0" spacing="10.0">
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83 <children>
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84 <Label id="fdrLabel" prefHeight="17.0" prefWidth="120.0" text="FDR Score:" textAlignment="CENTER" underline="true">
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85 <HBox.margin>
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86 <Insets />
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87 </HBox.margin>
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88 <padding>
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89 <Insets left="10.0" right="10.0" />
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90 </padding>
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91 <font>
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92 <Font size="13.0" />
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93 </font>
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94 </Label>
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95 <TextField fx:id="fdrScore" prefHeight="25.0" prefWidth="74.0"/>
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96 </children>
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97 <opaqueInsets>
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98 <Insets bottom="10.0" left="10.0" right="10.0" top="10.0" />
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99 </opaqueInsets>
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100 <VBox.margin>
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101 <Insets bottom="10.0" left="10.0" right="10.0" top="5.0" />
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102 </VBox.margin>
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103 </HBox>
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104 <HBox id="folderHBox" layoutX="20.0" layoutY="80.0" spacing="10.0">
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105 <children>
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106 <Label id="folderLabel" prefWidth="120.0" text="Output Folder:" textAlignment="CENTER" underline="true">
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107 <font>
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108 <Font size="13.0" />
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109 </font>
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110 <padding>
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111 <Insets left="10.0" right="10.0" />
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112 </padding>
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113 <HBox.margin>
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114 <Insets />
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115 </HBox.margin>
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116 </Label>
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117 <TextField fx:id="outPath" HBox.hgrow="ALWAYS" />
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118 <Button id="outSearchButton" mnemonicParsing="false" onAction="#browseFolderClicked" text="..." />
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119 </children>
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120 <opaqueInsets>
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121 <Insets bottom="10.0" left="10.0" right="10.0" top="10.0" />
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122 </opaqueInsets>
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123 <VBox.margin>
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124 <Insets bottom="5.0" left="10.0" right="10.0" top="30.0" />
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125 </VBox.margin>
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126 </HBox>
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127 <HBox id="groupHBox" layoutX="10.0" layoutY="180.0" spacing="10.0">
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128 <children>
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129 <Label id="groupLabel" prefWidth="120.0" text="Output Group:" textAlignment="CENTER" underline="true">
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130 <font>
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131 <Font size="13.0" />
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132 </font>
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133 <padding>
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134 <Insets left="10.0" right="10.0" />
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135 </padding>
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136 <HBox.margin>
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137 <Insets />
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138 </HBox.margin>
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139 </Label>
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140 <TextField fx:id="outGroup" />
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141 </children>
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142 <opaqueInsets>
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143 <Insets bottom="10.0" left="10.0" right="10.0" top="10.0" />
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144 </opaqueInsets>
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145 <VBox.margin>
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146 <Insets bottom="10.0" left="10.0" right="10.0" top="5.0" />
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147 </VBox.margin>
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148 </HBox>
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149 <Region id="region" prefHeight="200.0" prefWidth="200.0" VBox.vgrow="ALWAYS" />
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150 <ToolBar id="toolBar" nodeOrientation="RIGHT_TO_LEFT" prefHeight="40.0" prefWidth="200.0">
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151 <items>
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152 <Button id="submitButton" mnemonicParsing="false" text="Submit" onAction="#submitButtonClicked" >
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153 <font>
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154 <Font size="13.0" />
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155 </font>
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156 </Button>
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157 </items>
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158 </ToolBar>
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159 </children>
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160 </VBox>
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