Mercurial > repos > jfb > kinatest_scoring_function

comparison scoring function/KinatestScoring.xml @ 9:9e6f02d7d820 draft

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author jfb
date Sat, 27 Apr 2019 17:02:02 -0400
parents ff1ff59af83c
children 1816bf5d1735
comparison
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8:ff1ff59af83c 9:9e6f02d7d820
21 <param name="Dz" type="text" value="Y" label="Amino Acid(s) in Central Position"/> 21 <param name="Dz" type="text" value="Y" label="Amino Acid(s) in Central Position"/>
22 <param name="Po" type="text" value="VTS" label="Amino Acid(s) in +1 Position"/> 22 <param name="Po" type="text" value="VTS" label="Amino Acid(s) in +1 Position"/>
23 <param name="Ptw" type="text" value="RQP" label="Amino Acid(s) in +2 Position"/> 23 <param name="Ptw" type="text" value="RQP" label="Amino Acid(s) in +2 Position"/>
24 <param name="Pth" type="text" value="NML" label="Amino Acid(s) in +3 Position"/> 24 <param name="Pth" type="text" value="NML" label="Amino Acid(s) in +3 Position"/>
25 <param name="Pfo" type="text" value="KIH" label="Amino Acid(s) in +4 Position"/> 25 <param name="Pfo" type="text" value="KIH" label="Amino Acid(s) in +4 Position"/>
26 <param name="Pf" type="text" value="GFE" label="Amino Acid(s) in +5 Position"/> 26 <param name="Pfi" type="text" value="GFE" label="Amino Acid(s) in +5 Position"/>
27 <param name="Ps" type="text" value="DCA" label="Amino Acid(s) in +6 Position"/> 27 <param name="Ps" type="text" value="DCA" label="Amino Acid(s) in +6 Position"/>
28 <param name="outGroup" type="text" value="kinase" label="Kinase Name"/> 28 <param name="outGroup" type="text" value="kinase" label="Kinase Name"/>
29 </inputs> 29 </inputs>
30 <outputs> 30 <outputs>
31 <data format="csv" name="PeptidesWithScores" from_work_dir="output.csv" label="${outGroup}_Substrates and Scores"/> 31 <data format="csv" name="PeptidesWithScores" from_work_dir="output.csv" label="${outGroup}_Substrates and Scores"/>