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1 #SCHEME GENUS SPECIES
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2 abaumannii Acinetobacter baumannii
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3 abaumannii_2 Acinetobacter baumannii
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4 achromobacter Achromobacter
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5 aeromonas Aeromonas
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6 afumigatus Aspergillus afumigatus
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7 aphagocytophilum Anaplasma aphagocytophilum
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8 arcobacter Arcobacter
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9 bburgdorferi Borrelia burgdorferi
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10 bcc Burkholderia cepacia
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11 bcereus Bacillus cereus
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12 bhampsonii Brachyspira hampsonii
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13 bhenselae Bartonella henselae
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14 bhyodysenteriae Brachyspira hyodysenteriae
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15 bifidobacterium Bifidobacterium bifidobacterium
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16 bintermedia Brachyspira intermedia
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17 blicheniformis Bacillus licheniformis
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18 bordetella Bordetella pertussis
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19 borrelia Borrelia
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20 bpilosicoli Brachyspira pilosicoli
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21 bpseudomallei Burkholderia pseudomallei
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22 brachyspira Brachyspira
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23 bsubtilis Bacillus subtilis
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24 calbicans Candida albicans
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25 campylobacter Campylobacter coli
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26 campylobacter Campylobacter jejuni
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27 cbotulinum Clostridium botulinum
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28 cconcisus Campylobacter concisus
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29 cdifficile Clostridium difficile
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30 cdifficile Peptoclostridium difficile
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31 cdifficile_2 Clostridium difficile
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32 cdiphtheriae Corynebacterium diphtheriae
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33 cfetus Campylobacter fetus
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34 cfreundii Citrobacter freundii
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35 cglabrata Candida glabrata
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36 chelveticus Campylobacter helveticus
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37 chlamydiales Chlamydia
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38 chyointestinalis Campylobacter hyointestinalis
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39 cinsulaenigrae Campylobacter insulaenigrae
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40 ckrusei Candida krusei
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41 clanienae Campylobacter lanienae
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42 clari Campylobacter lari
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43 cmaltaromaticum Carnobacterium maltaromaticum
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44 cneoformans Cryptococcus neoformans
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45 cronobacter Cronobacter
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46 csepticum Clostridium septicum
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47 csinensis Clonorchis sinensis
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48 csputorum Campylobacter sputorum
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49 ctropicalis Candida tropicalis
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50 cupsaliensis Campylobacter upsaliensis
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51 ecloacae Enterobacter cloacae
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52 ecoli Escherichia
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53 ecoli Shigella
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54 ecoli_2 Escherichia
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55 edwardsiella Edwardsiella tarda
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56 efaecalis Enterococcus faecalis
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57 efaecium Enterococcus faecium
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58 fpsychrophilum Flavobacterium psychrophilum
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59 haemophilus Haemophilus
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60 hcinaedi Helicobacter cinaedi
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61 hinfluenzae Haemophilus influenzae
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62 hparasuis Haemophilus parasuis
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63 hpylori Helicobacter pylori
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64 hsuis Haematopinus suis
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65 kkingae Kingella kingae
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66 koxytoca Klebsiella oxytoca
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67 kpneumoniae Klebsiella pneumoniae
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68 kseptempunctata Kudoa septempunctata
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69 lcasei Lactobacillus casei
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70 legionella Legionella
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71 leptospira Leptospira
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72 leptospira_2 Leptospira
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73 leptospira_3 Leptospira
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74 lmonocytogenes Listeria monocytogenes
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75 lsalivarius Lactobacillus salivarius
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76 mabscessus Mycobacterium abscessus
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77 magalactiae Mycoplasma agalactiae
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78 mbovis Mycoplasma bovis
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79 mcatarrhalis Moraxells catarrhalis
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80 mhaemolytica Mannheimia haemolytica
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81 mhyorhinis Mycoplasma hyorhinis
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82 mmassiliense Mycobacterium massiliense
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83 mplutonius Melissococcus plutonius
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84 neisseria Neisseria
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85 orhinotracheale Ornithobacterium rhinotracheale
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86 otsutsugamushi Orientia tsutsugamushi
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87 pacnes Propionibacterium acnes
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88 paeruginosa Pseudomonas aeruginosa
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89 pagglomerans Pantoea agglomerans
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90 pfluorescens Pseudomonas fluorescens
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91 pfreudenreichii Propionibacterium freudenreichii
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92 pgingivalis Porphyromonas gingivalis
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93 plarvae Paenibacillus larvae
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94 pmultocida_multihost Pasteurella multocida
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95 pmultocida_rirdc Pasteurella multocida
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96 ppentosaceus Pediococcus pentosaceus
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97 pshigelloides Plesiomonas shigelloides
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98 ranatipestifer Riemerella anatipestifer
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99 sagalactiae Streptococcus agalactiae
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100 saureus Staphylococcus aureus
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101 scanis Streptococcus canis
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102 sdysgalactiae Streptococcus dysgalactiae
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103 senterica Salmonella enterica
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104 sepidermidis Staphylococcus epidermidis
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105 sgallolyticus Streptococcus gallolyticus
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106 shaemolyticus Staphylococcus haemolyticus
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107 shominis Stapylococcus hominis
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108 sinorhizobium Sinorhizobium
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109 slugdunensis Staphylococcus lugdunensis
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110 smaltophilia Stenotrophomonas maltophilia
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111 soralis Streptococcus oralis
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112 spneumoniae Streptococcus pneumoniae
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113 spseudintermedius Staphylococcus pseudintermedius
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114 spyogenes Streptococcus pyogenes
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115 ssuis Streptococcus suis
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116 sthermophilus Streptococcus thermophilus
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117 sthermophilus_2 Streptococcus thermophilus
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118 streptomyces Streptomyces
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119 suberis Streptococcus uberis
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120 szooepidemicus Streptococcus equi
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121 taylorella Taylorella
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122 tenacibaculum Tenacibaculum
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123 tvaginalis Trichomonas vaginalis
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124 vcholerae Vibrio cholerae
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125 vibrio Vibrio
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126 vparahaemolyticus Vibrio parahaemolyticus
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127 vtapetis Vibrio tapetis
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128 vvulnificus Vibrio vulnificus
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129 wolbachia Wolbachia
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130 xfastidiosa Xylella fastidiosa
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131 yersinia Yersinia
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132 ypseudotuberculosis Yersinia pseudotuberculosis
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133 yruckeri Yersinia ruckeri
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