Mercurial > repos > jjjjia > cpo_prediction
comparison scheme_species_map.tab @ 0:917a05a03ac9 draft
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| author | jjjjia |
|---|---|
| date | Tue, 14 Aug 2018 17:18:49 -0400 |
| parents | |
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| -1:000000000000 | 0:917a05a03ac9 |
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| 1 #SCHEME GENUS SPECIES | |
| 2 abaumannii Acinetobacter baumannii | |
| 3 abaumannii_2 Acinetobacter baumannii | |
| 4 achromobacter Achromobacter | |
| 5 aeromonas Aeromonas | |
| 6 afumigatus Aspergillus afumigatus | |
| 7 aphagocytophilum Anaplasma aphagocytophilum | |
| 8 arcobacter Arcobacter | |
| 9 bburgdorferi Borrelia burgdorferi | |
| 10 bcc Burkholderia cepacia | |
| 11 bcereus Bacillus cereus | |
| 12 bhampsonii Brachyspira hampsonii | |
| 13 bhenselae Bartonella henselae | |
| 14 bhyodysenteriae Brachyspira hyodysenteriae | |
| 15 bifidobacterium Bifidobacterium bifidobacterium | |
| 16 bintermedia Brachyspira intermedia | |
| 17 blicheniformis Bacillus licheniformis | |
| 18 bordetella Bordetella pertussis | |
| 19 borrelia Borrelia | |
| 20 bpilosicoli Brachyspira pilosicoli | |
| 21 bpseudomallei Burkholderia pseudomallei | |
| 22 brachyspira Brachyspira | |
| 23 bsubtilis Bacillus subtilis | |
| 24 calbicans Candida albicans | |
| 25 campylobacter Campylobacter coli | |
| 26 campylobacter Campylobacter jejuni | |
| 27 cbotulinum Clostridium botulinum | |
| 28 cconcisus Campylobacter concisus | |
| 29 cdifficile Clostridium difficile | |
| 30 cdifficile Peptoclostridium difficile | |
| 31 cdifficile_2 Clostridium difficile | |
| 32 cdiphtheriae Corynebacterium diphtheriae | |
| 33 cfetus Campylobacter fetus | |
| 34 cfreundii Citrobacter freundii | |
| 35 cglabrata Candida glabrata | |
| 36 chelveticus Campylobacter helveticus | |
| 37 chlamydiales Chlamydia | |
| 38 chyointestinalis Campylobacter hyointestinalis | |
| 39 cinsulaenigrae Campylobacter insulaenigrae | |
| 40 ckrusei Candida krusei | |
| 41 clanienae Campylobacter lanienae | |
| 42 clari Campylobacter lari | |
| 43 cmaltaromaticum Carnobacterium maltaromaticum | |
| 44 cneoformans Cryptococcus neoformans | |
| 45 cronobacter Cronobacter | |
| 46 csepticum Clostridium septicum | |
| 47 csinensis Clonorchis sinensis | |
| 48 csputorum Campylobacter sputorum | |
| 49 ctropicalis Candida tropicalis | |
| 50 cupsaliensis Campylobacter upsaliensis | |
| 51 ecloacae Enterobacter cloacae | |
| 52 ecoli Escherichia | |
| 53 ecoli Shigella | |
| 54 ecoli_2 Escherichia | |
| 55 edwardsiella Edwardsiella tarda | |
| 56 efaecalis Enterococcus faecalis | |
| 57 efaecium Enterococcus faecium | |
| 58 fpsychrophilum Flavobacterium psychrophilum | |
| 59 haemophilus Haemophilus | |
| 60 hcinaedi Helicobacter cinaedi | |
| 61 hinfluenzae Haemophilus influenzae | |
| 62 hparasuis Haemophilus parasuis | |
| 63 hpylori Helicobacter pylori | |
| 64 hsuis Haematopinus suis | |
| 65 kkingae Kingella kingae | |
| 66 koxytoca Klebsiella oxytoca | |
| 67 kpneumoniae Klebsiella pneumoniae | |
| 68 kseptempunctata Kudoa septempunctata | |
| 69 lcasei Lactobacillus casei | |
| 70 legionella Legionella | |
| 71 leptospira Leptospira | |
| 72 leptospira_2 Leptospira | |
| 73 leptospira_3 Leptospira | |
| 74 lmonocytogenes Listeria monocytogenes | |
| 75 lsalivarius Lactobacillus salivarius | |
| 76 mabscessus Mycobacterium abscessus | |
| 77 magalactiae Mycoplasma agalactiae | |
| 78 mbovis Mycoplasma bovis | |
| 79 mcatarrhalis Moraxells catarrhalis | |
| 80 mhaemolytica Mannheimia haemolytica | |
| 81 mhyorhinis Mycoplasma hyorhinis | |
| 82 mmassiliense Mycobacterium massiliense | |
| 83 mplutonius Melissococcus plutonius | |
| 84 neisseria Neisseria | |
| 85 orhinotracheale Ornithobacterium rhinotracheale | |
| 86 otsutsugamushi Orientia tsutsugamushi | |
| 87 pacnes Propionibacterium acnes | |
| 88 paeruginosa Pseudomonas aeruginosa | |
| 89 pagglomerans Pantoea agglomerans | |
| 90 pfluorescens Pseudomonas fluorescens | |
| 91 pfreudenreichii Propionibacterium freudenreichii | |
| 92 pgingivalis Porphyromonas gingivalis | |
| 93 plarvae Paenibacillus larvae | |
| 94 pmultocida_multihost Pasteurella multocida | |
| 95 pmultocida_rirdc Pasteurella multocida | |
| 96 ppentosaceus Pediococcus pentosaceus | |
| 97 pshigelloides Plesiomonas shigelloides | |
| 98 ranatipestifer Riemerella anatipestifer | |
| 99 sagalactiae Streptococcus agalactiae | |
| 100 saureus Staphylococcus aureus | |
| 101 scanis Streptococcus canis | |
| 102 sdysgalactiae Streptococcus dysgalactiae | |
| 103 senterica Salmonella enterica | |
| 104 sepidermidis Staphylococcus epidermidis | |
| 105 sgallolyticus Streptococcus gallolyticus | |
| 106 shaemolyticus Staphylococcus haemolyticus | |
| 107 shominis Stapylococcus hominis | |
| 108 sinorhizobium Sinorhizobium | |
| 109 slugdunensis Staphylococcus lugdunensis | |
| 110 smaltophilia Stenotrophomonas maltophilia | |
| 111 soralis Streptococcus oralis | |
| 112 spneumoniae Streptococcus pneumoniae | |
| 113 spseudintermedius Staphylococcus pseudintermedius | |
| 114 spyogenes Streptococcus pyogenes | |
| 115 ssuis Streptococcus suis | |
| 116 sthermophilus Streptococcus thermophilus | |
| 117 sthermophilus_2 Streptococcus thermophilus | |
| 118 streptomyces Streptomyces | |
| 119 suberis Streptococcus uberis | |
| 120 szooepidemicus Streptococcus equi | |
| 121 taylorella Taylorella | |
| 122 tenacibaculum Tenacibaculum | |
| 123 tvaginalis Trichomonas vaginalis | |
| 124 vcholerae Vibrio cholerae | |
| 125 vibrio Vibrio | |
| 126 vparahaemolyticus Vibrio parahaemolyticus | |
| 127 vtapetis Vibrio tapetis | |
| 128 vvulnificus Vibrio vulnificus | |
| 129 wolbachia Wolbachia | |
| 130 xfastidiosa Xylella fastidiosa | |
| 131 yersinia Yersinia | |
| 132 ypseudotuberculosis Yersinia pseudotuberculosis | |
| 133 yruckeri Yersinia ruckeri |