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comparison plasmidfinder/sequences.nsd @ 1:fea89c4d5227 draft

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author jjjjia
date Thu, 16 Aug 2018 19:27:05 -0400
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0:917a05a03ac9 1:fea89c4d5227
1 lcl|plasmidfinder~~~col(bs512)_1__nc_010656_dupe~~~1
2 lcl|plasmidfinder~~~col(bs512)_1~~~nc_0106560
3 lcl|plasmidfinder~~~col(imgs31)_1~~~nc_0114062
4 lcl|plasmidfinder~~~col(irgk)_1~~~ay5430713
5 lcl|plasmidfinder~~~col(kphs6)_1~~~nc_0168414
6 lcl|plasmidfinder~~~col(mg828)_1~~~nc_0084865
7 lcl|plasmidfinder~~~col(mgd2)_1~~~nc_0037896
8 lcl|plasmidfinder~~~col(mp18)_1~~~nc_0136527
9 lcl|plasmidfinder~~~col(pwes)_1~~~dq26876413
10 lcl|plasmidfinder~~~col(sd853)_1~~~nc_0153928
11 lcl|plasmidfinder~~~col(vcm04)_1~~~hm2311659
12 lcl|plasmidfinder~~~col(yc)_1~~~nc_00214410
13 lcl|plasmidfinder~~~col(ye4449)_1~~~fj69640512
14 lcl|plasmidfinder~~~col(yf27601)_1~~~jf93765511
15 lcl|plasmidfinder~~~col156_1~~~nc_00978114
16 lcl|plasmidfinder~~~col3m_1~~~jx51406515
17 lcl|plasmidfinder~~~col8282_1~~~dq99535316
18 lcl|plasmidfinder~~~cole10_1~~~x0165417
19 lcl|plasmidfinder~~~colkp3_1~~~jn20580018
20 lcl|plasmidfinder~~~colpvc_1~~~jx13308820
21 lcl|plasmidfinder~~~colrnai_1~~~dq29801919
22 lcl|plasmidfinder~~~inca/c2_1~~~jn15780421
23 lcl|plasmidfinder~~~inca/c_1~~~fj70580722
24 lcl|plasmidfinder~~~incb/o/k/z_1~~~cu92814723
25 lcl|plasmidfinder~~~incb/o/k/z_2~~~gu25664124
26 lcl|plasmidfinder~~~incb/o/k/z_3~~~gq25988825
27 lcl|plasmidfinder~~~incb/o/k/z_4~~~fn86883226
28 lcl|plasmidfinder~~~incfia(hi1)_1_hi1~~~af25087827
29 lcl|plasmidfinder~~~incfia_1~~~ap00191828
30 lcl|plasmidfinder~~~incfib(ap001918)_1~~~ap00191829
31 lcl|plasmidfinder~~~incfib(k)_1_kpn3~~~jn23370430
32 lcl|plasmidfinder~~~incfib(mar)_1_pndm-mar~~~jn42033631
33 lcl|plasmidfinder~~~incfib(pb171)_1_pb171~~~ab02494633
34 lcl|plasmidfinder~~~incfib(pctu1)_1_pctu1~~~fn54309434
35 lcl|plasmidfinder~~~incfib(pctu3)_1_pctu3~~~fn54309635
36 lcl|plasmidfinder~~~incfib(pecla)_1_pecla~~~cp00191936
37 lcl|plasmidfinder~~~incfib(pentas01)_1_pentas01~~~cp00302737
38 lcl|plasmidfinder~~~incfib(pente01)_1_pente01~~~cp00065438
39 lcl|plasmidfinder~~~incfib(phcm2)_1_phcm2~~~al51338439
40 lcl|plasmidfinder~~~incfib(pkphs1)_1_pkphs1~~~cp00322340
41 lcl|plasmidfinder~~~incfib(plf82)_1_plf82~~~cu63887241
42 lcl|plasmidfinder~~~incfib(pqil)_1_pqil~~~jn23370542
43 lcl|plasmidfinder~~~incfib(s)_1~~~fn43203132
44 lcl|plasmidfinder~~~incfic(fii)_1~~~ap00191843
45 lcl|plasmidfinder~~~incfii(29)_1_puti89~~~cp00303544
46 lcl|plasmidfinder~~~incfii(k)_1~~~cp00064845
47 lcl|plasmidfinder~~~incfii(p14)_1_p14~~~jq41853851
48 lcl|plasmidfinder~~~incfii(p96a)_1_p96a~~~jq41852152
49 lcl|plasmidfinder~~~incfii(pcoo)_1_pcoo~~~cr94228555
50 lcl|plasmidfinder~~~incfii(pcry)_1_pcry~~~nc_00581453
51 lcl|plasmidfinder~~~incfii(pctu2)_1_pctu2~~~fn54309554
52 lcl|plasmidfinder~~~incfii(pecla)_1_pecla~~~cp00191956
53 lcl|plasmidfinder~~~incfii(penta)_1_penta~~~cp00302757
54 lcl|plasmidfinder~~~incfii(phn7a8)_1_phn7a8~~~jn23251758
55 lcl|plasmidfinder~~~incfii(pkpx1)~~~ap01205559
56 lcl|plasmidfinder~~~incfii(pmet)_1_pmet1~~~eu38301660
57 lcl|plasmidfinder~~~incfii(prsb107)_1_prsb107~~~aj85108961
58 lcl|plasmidfinder~~~incfii(pse11)_1_pse11~~~ap00924262
59 lcl|plasmidfinder~~~incfii(pseudo)_1_pseudo~~~nc_01175964
60 lcl|plasmidfinder~~~incfii(pyva12790)_1_pyva12790~~~ay15084363
61 lcl|plasmidfinder~~~incfii(s)_1~~~cp00085846
62 lcl|plasmidfinder~~~incfii(sarc14)_1_sarc14~~~jq41854047
63 lcl|plasmidfinder~~~incfii(serratia)_1_serratia~~~nc_00982948
64 lcl|plasmidfinder~~~incfii(y)_1_ps~~~cp00104949
65 lcl|plasmidfinder~~~incfii(yp)_1_yersenia~~~cp00067050
66 lcl|plasmidfinder~~~incfii_1_pkp91~~~cp00096666
67 lcl|plasmidfinder~~~incfii_1_psfo~~~af40129267
68 lcl|plasmidfinder~~~incfii_1~~~ay45801665
69 lcl|plasmidfinder~~~inchi1a(cit)_1_pndm-cit~~~jx18297568
70 lcl|plasmidfinder~~~inchi1a_1~~~af25087869
71 lcl|plasmidfinder~~~inchi1b(cit)_1_pndm-cit~~~jx18297570
72 lcl|plasmidfinder~~~inchi1b(r27)_1_r27~~~af25087871
73 lcl|plasmidfinder~~~inchi1b_1_pndm-mar~~~jn42033672
74 lcl|plasmidfinder~~~inchi2_1~~~bx66401574
75 lcl|plasmidfinder~~~inchi2a_1~~~bx66401573
76 lcl|plasmidfinder~~~inci1_1_alpha~~~ap00514775
77 lcl|plasmidfinder~~~inci2_1_delta~~~ap00252777
78 lcl|plasmidfinder~~~inci2_1~~~kp34712776
79 lcl|plasmidfinder~~~incl/m(pmu407)_1_pmu407~~~u2734578
80 lcl|plasmidfinder~~~incl/m(poxa-48)_1_poxa-48~~~jn62628679
81 lcl|plasmidfinder~~~incl/m_1~~~af55041580
82 lcl|plasmidfinder~~~incn2_1~~~jf78554981
83 lcl|plasmidfinder~~~incn3_1~~~ef21913482
84 lcl|plasmidfinder~~~incn_1~~~ay04627683
85 lcl|plasmidfinder~~~incp(6)_1~~~jf78555084
86 lcl|plasmidfinder~~~incp(beta)_1_beta~~~u6719485
87 lcl|plasmidfinder~~~incq1_1~~~he65472686
88 lcl|plasmidfinder~~~incq2_1~~~fj69640487
89 lcl|plasmidfinder~~~incr_1~~~dq44957888
90 lcl|plasmidfinder~~~inct_1~~~ap00423789
91 lcl|plasmidfinder~~~incu_1~~~dq40110390
92 lcl|plasmidfinder~~~incw_1~~~ef63350791
93 lcl|plasmidfinder~~~incx1_1~~~eu37091392
94 lcl|plasmidfinder~~~incx1_2~~~cp00341793
95 lcl|plasmidfinder~~~incx1_3~~~cp00112394
96 lcl|plasmidfinder~~~incx1_4~~~jn93589895
97 lcl|plasmidfinder~~~incx2_1~~~jq26933596
98 lcl|plasmidfinder~~~incx3(pec14)_1_pec14~~~jn93589997
99 lcl|plasmidfinder~~~incx3_1~~~jn24785298
100 lcl|plasmidfinder~~~incx4_1~~~cp00289599
101 lcl|plasmidfinder~~~incx4_2~~~fn543504100
102 lcl|plasmidfinder~~~incx5_1~~~nc_015054101
103 lcl|plasmidfinder~~~incx6_1~~~am942760102
104 lcl|plasmidfinder~~~incy_1~~~k02380103
105 lcl|plasmidfinder~~~p0111_1~~~ap010962107
106 lcl|plasmidfinder~~~p1_alpha~~~bn000925104
107 lcl|plasmidfinder~~~padap_1~~~af135182108
108 lcl|plasmidfinder~~~pec4115_1~~~nc_011351109
109 lcl|plasmidfinder~~~pentas02_1~~~cp003028110
110 lcl|plasmidfinder~~~pesa2_1~~~cp000784111
111 lcl|plasmidfinder~~~pip31758(p153)_1_p153~~~cp000719112
112 lcl|plasmidfinder~~~pip31758(p59)_1_p59~~~cp000718113
113 lcl|plasmidfinder~~~pip32953_1~~~bx936400114
114 lcl|plasmidfinder~~~pjars36_1~~~nc_015068115
115 lcl|plasmidfinder~~~psl483_1~~~cp001137116
116 lcl|plasmidfinder~~~psm22_1~~~nc_015972117
117 lcl|plasmidfinder~~~pxuzhou21_1~~~cp001927118
118 lcl|plasmidfinder~~~pye854_1~~~am905950119
119 lcl|plasmidfinder~~~rep10_1_repl(pe5)~~~m17990120
120 lcl|plasmidfinder~~~rep10_2_cds1(pim13)~~~m13761121
121 lcl|plasmidfinder~~~rep10_3_orf(pne131)~~~nc001390122
122 lcl|plasmidfinder~~~rep10_5_repl(pwbg738)~~~dq088624.1123
123 lcl|plasmidfinder~~~rep10_6_rep(sap093b)~~~gq900442.1124
124 lcl|plasmidfinder~~~rep10b_1_rep(psk3)~~~nc001994125
125 lcl|plasmidfinder~~~rep10b_2_rep(psk6)~~~sau96610126
126 lcl|plasmidfinder~~~rep11_1_repa(pb82)~~~ab178871127
127 lcl|plasmidfinder~~~rep11_2_repa(pef1071)~~~af164559128
128 lcl|plasmidfinder~~~rep11_3_rep(pefr)~~~af511037129
129 lcl|plasmidfinder~~~rep12_1_cds32(pbmb67)~~~dq363750130
130 lcl|plasmidfinder~~~rep12_2_cds1(plasmid)~~~ay278324131
131 lcl|plasmidfinder~~~rep13_1_orf(pc194)~~~nc002013132
132 lcl|plasmidfinder~~~rep13_2_cds39(pssp1)~~~ap008935133
133 lcl|plasmidfinder~~~rep13_3_rep(pwbg1773)~~~ef537646134
134 lcl|plasmidfinder~~~rep13_4_rep(pkh13)~~~nc010426.1135
135 lcl|plasmidfinder~~~rep13_5_rep(pmc524/mbm)~~~aj312056.2136
136 lcl|plasmidfinder~~~rep14_1_cds2(pefnp1)~~~ab038522137
137 lcl|plasmidfinder~~~rep14_2_orf(pkq10)~~~efu01917138
138 lcl|plasmidfinder~~~rep14_3_orf(pri1)~~~eu327398139
139 lcl|plasmidfinder~~~rep15_1_repa(plw043)~~~ae017171140
140 lcl|plasmidfinder~~~rep16_1_cds8(psas)~~~bx571858141
141 lcl|plasmidfinder~~~rep16_2_cds6(psjh101)~~~cp000737142
142 lcl|plasmidfinder~~~rep16_3_rep(saa6159)~~~cp002115.1143
143 lcl|plasmidfinder~~~rep16_4_unknown(sap056a)~~~gq900478.1144
144 lcl|plasmidfinder~~~rep16_5_unknown(pwbg759)~~~gq900401.1145
145 lcl|plasmidfinder~~~rep16_6_unknown(sap071a)~~~gq900485.1146
146 lcl|plasmidfinder~~~rep16_7_rep(pbora53)~~~ay917098.1147
147 lcl|plasmidfinder~~~rep17_1_cds29(prum)~~~af507977148
148 lcl|plasmidfinder~~~rep18_1_repa(p200b)~~~ab158402149
149 lcl|plasmidfinder~~~rep18_2_repa(pef418)~~~af408195150
150 lcl|plasmidfinder~~~rep19_10_rep(pwbg746)~~~gq900390.1151
151 lcl|plasmidfinder~~~rep19_1_cds45(plew6932)~~~nc009130152
152 lcl|plasmidfinder~~~rep19_2_rep(psa1379)~~~nc007931153
153 lcl|plasmidfinder~~~rep19_3_cds20(psjh901)~~~cp000704154
154 lcl|plasmidfinder~~~rep19_4_repa(pub101)~~~nc005127155
155 lcl|plasmidfinder~~~rep19_5_rep(pwbg747)~~~gq900399.1156
156 lcl|plasmidfinder~~~rep19_6_orf34(edina)~~~ap003089.1157
157 lcl|plasmidfinder~~~rep19_7_repa(sap019a)~~~gq900385.1158
158 lcl|plasmidfinder~~~rep19_8_repa(pwbg759)~~~gq900401.1159
159 lcl|plasmidfinder~~~rep19_9_repa(ap071a)~~~gq900485.1160
160 lcl|plasmidfinder~~~rep1_1_repe(pambeta1)~~~af007787161
161 lcl|plasmidfinder~~~rep1_2_reps(pbt233)~~~x64695162
162 lcl|plasmidfinder~~~rep1_3_repr(pgb354)~~~u83488163
163 lcl|plasmidfinder~~~rep1_4_repe(orf17)~~~nc011140164
164 lcl|plasmidfinder~~~rep1_5_cds6(pre25)~~~x92945165
165 lcl|plasmidfinder~~~rep1_6_repe(ptef1)~~~ae016833166
166 lcl|plasmidfinder~~~rep20_10_repa(sap057a)~~~nc_013334.1167
167 lcl|plasmidfinder~~~rep20_11_repa(vrsap)~~~ap003367168
168 lcl|plasmidfinder~~~rep20_1_orf1(edina)~~~ap003089169
169 lcl|plasmidfinder~~~rep20_2_repa(pwbg753)~~~gq900395.1170
170 lcl|plasmidfinder~~~rep20_3_rep(ptw20)~~~fn433597.1171
171 lcl|plasmidfinder~~~rep20_4_repa(sap102a)~~~gq900496.1172
172 lcl|plasmidfinder~~~rep20_5_repa(psk23)~~~gq900491.1173
173 lcl|plasmidfinder~~~rep20_6_repa(sap059a)~~~gq900480.1174
174 lcl|plasmidfinder~~~rep20_7_repa(sap074a)~~~gq900426.1175
175 lcl|plasmidfinder~~~rep20_8_repa(sap063a)~~~gq900418.1176
176 lcl|plasmidfinder~~~rep20_9_repa(sap055a)~~~gq900414.1177
177 lcl|plasmidfinder~~~rep21_10_rep(pkh14)~~~eu164802.1178
178 lcl|plasmidfinder~~~rep21_11_rep(psa1308)~~~ab254848.1179
179 lcl|plasmidfinder~~~rep21_12_rep(pkh3)~~~af151117.1180
180 lcl|plasmidfinder~~~rep21_13_rep(sap101a)~~~gq900495.1181
181 lcl|plasmidfinder~~~rep21_14_rep(pkh21)~~~eu350088.1182
182 lcl|plasmidfinder~~~rep21_1_rep(pwbg754)~~~gq900396.1183
183 lcl|plasmidfinder~~~rep21_2_rep(pnvh01)~~~aj512814.1184
184 lcl|plasmidfinder~~~rep21_3_ps0385-3~~~am990995.1185
185 lcl|plasmidfinder~~~rep21_4_reprc(psk41)~~~af051917.1186
186 lcl|plasmidfinder~~~rep21_5_reprc(pgo1)~~~fm207042.1187
187 lcl|plasmidfinder~~~rep21_6_rep(pbmsa1)~~~ay541446.1188
188 lcl|plasmidfinder~~~rep21_7_rep(pwbg760)~~~gq900473.1189
189 lcl|plasmidfinder~~~rep21_8_rep(sap071a)~~~gq900485.1190
190 lcl|plasmidfinder~~~rep21_9_rep(pkh12)~~~eu168704.2191
191 lcl|plasmidfinder~~~rep22_1_repb(pub110)~~~x03408.1192
192 lcl|plasmidfinder~~~rep22_2_repu(pkks825)~~~fn377602.2193
193 lcl|plasmidfinder~~~rep23_1_rep(ppr9)~~~gu237136.1194
194 lcl|plasmidfinder~~~rep23_2_rep(pv030-8)~~~eu366902.1195
195 lcl|plasmidfinder~~~rep24_1_rep(pwbg745)~~~gq900389.1196
196 lcl|plasmidfinder~~~rep24_2_rep(pwbg749)~~~gq900391.1197
197 lcl|plasmidfinder~~~rep2_1_orf(e.faeciumcontig1183)_jdoe~~~198
198 lcl|plasmidfinder~~~rep2_2_repr(pef1)~~~dq198088199
199 lcl|plasmidfinder~~~rep3_1_rep63a(paw63)~~~bth011655200
200 lcl|plasmidfinder~~~rep3_2_rep165(pbmb165)~~~dq242517201
201 lcl|plasmidfinder~~~rep3_3_rep(pbt9727)~~~cp000047202
202 lcl|plasmidfinder~~~rep3_4_cds38(pox2)~~~nc002146203
203 lcl|plasmidfinder~~~rep4_1_cds2(pcrl291.1)~~~nc002799204
204 lcl|plasmidfinder~~~rep4_2_cds3(pkc5b)~~~af378372205
205 lcl|plasmidfinder~~~rep4_3_orf(pmbb1)~~~efu26268206
206 lcl|plasmidfinder~~~rep5_1_rep(pmw2)~~~nc005011207
207 lcl|plasmidfinder~~~rep5_2_rep(pn315)~~~ap003139208
208 lcl|plasmidfinder~~~rep5_3_rep(pwbg752)~~~gq900394.1209
209 lcl|plasmidfinder~~~rep5_4_rep(sap047a)~~~gq900405.1210
210 lcl|plasmidfinder~~~rep5_5_rep(prj6)~~~af241888.2211
211 lcl|plasmidfinder~~~rep5_6_rep(prj9)~~~af447813.1212
212 lcl|plasmidfinder~~~rep5_7_rep(pje1)~~~af051916.1213
213 lcl|plasmidfinder~~~rep6_1_repa(p703/5)~~~af109375214
214 lcl|plasmidfinder~~~rep7_10_repc(pkh17)~~~nc_010284.1215
215 lcl|plasmidfinder~~~rep7_12_rep(sap060b)~~~gq900417.1216
216 lcl|plasmidfinder~~~rep7_13_rep(psbk203)~~~u35036.1217
217 lcl|plasmidfinder~~~rep7_14_rep(mssa476)~~~bx571857.1218
218 lcl|plasmidfinder~~~rep7_15_rep(ps0385-2)~~~am990994.1219
219 lcl|plasmidfinder~~~rep7_16_repd~~~ay939911220
220 lcl|plasmidfinder~~~rep7_17_repc(ps0385-1)~~~am990993.1221
221 lcl|plasmidfinder~~~rep7_1_repc(cassette)~~~ab037671222
222 lcl|plasmidfinder~~~rep7_2_cds2(pc221)~~~nc002129223
223 lcl|plasmidfinder~~~rep7_3_cds1(pcw7)~~~j03323224
224 lcl|plasmidfinder~~~rep7_4_repd(pk214)~~~nc009751225
225 lcl|plasmidfinder~~~rep7_5_cds1(pkc5b)~~~af378372226
226 lcl|plasmidfinder~~~rep7_6_orf(pkh1)~~~sau38656227
227 lcl|plasmidfinder~~~rep7_7_rep(pkh7)~~~nc002096228
228 lcl|plasmidfinder~~~rep7_8_cds4(ps194)~~~nc005564229
229 lcl|plasmidfinder~~~rep7_9_cds3(pusa02)~~~nc007791230
230 lcl|plasmidfinder~~~rep7b_1_repj(pc223)~~~nc_005243.1231
231 lcl|plasmidfinder~~~rep7b_2_pvga~~~nc_011605.1232
232 lcl|plasmidfinder~~~rep7b_3_sap089a~~~gq900440.1233
233 lcl|plasmidfinder~~~rep8_1_ep002*(pam373)~~~nc002630234
234 lcl|plasmidfinder~~~rep8_2_repa(pej97-1)~~~aj49170235
235 lcl|plasmidfinder~~~rep9_1_repa(pad1)~~~l01794236
236 lcl|plasmidfinder~~~rep9_2_prgw(pcf10)~~~ay855841237
237 lcl|plasmidfinder~~~rep9_3_repa(ppd1)~~~d78016238
238 lcl|plasmidfinder~~~rep9_4_repa2(ptef2)~~~ae016831239
239 lcl|plasmidfinder~~~rep_1_pkpc-2~~~cp011573105
240 lcl|plasmidfinder~~~repa_1_pkpc-2~~~cp013325240
241 lcl|plasmidfinder~~~repa_2_pkpc-2~~~jx397875241
242 lcl|plasmidfinder~~~repus10__cds25(pssp1)~~~ap008935242
243 lcl|plasmidfinder~~~repus11__cds16(ptef3)~~~ae016832243
244 lcl|plasmidfinder~~~repus12__rep(pub110)~~~af181950244
245 lcl|plasmidfinder~~~repus15__orf(e.faecium287)~~~nzaaak010000287245
246 lcl|plasmidfinder~~~repus16__repf(pe194)~~~m17811.1246
247 lcl|plasmidfinder~~~repus17__rep(pkks825)~~~fn377602.2247
248 lcl|plasmidfinder~~~repus18__rep(pkks825)~~~fn377602.2248
249 lcl|plasmidfinder~~~repus19__rep(pdlk3)~~~gu562626.1249
250 lcl|plasmidfinder~~~repus1__orf(e.faeciumcontig1258)_jdoe~~~250
251 lcl|plasmidfinder~~~repus20__rep(pavx)~~~cp001784.1251
252 lcl|plasmidfinder~~~repus21__rep(pwbg764)~~~gq900468.1252
253 lcl|plasmidfinder~~~repus22__rep(sap015b)~~~gq900502.1253
254 lcl|plasmidfinder~~~repus23__repa(sap099b)~~~gq900449.1254
255 lcl|plasmidfinder~~~repus2__repa(pbi143)~~~bfu30316255
256 lcl|plasmidfinder~~~repus3__repm200(pbm200)~~~dq437521256
257 lcl|plasmidfinder~~~repus4__repa(pci2000)~~~af178424257
258 lcl|plasmidfinder~~~repus5__cds20(petb)~~~nc003265258
259 lcl|plasmidfinder~~~repus6__rep(pfl1)~~~nc002132259
260 lcl|plasmidfinder~~~repus7__rep(phtbeta)~~~ab183714260
261 lcl|plasmidfinder~~~repus8__orf1(pog32)~~~loppog32261
262 lcl|plasmidfinder~~~repus9__rep(psk1)~~~af203376262
263 lcl|plasmidfinder~~~trfa_1~~~cp11611106
264 plasmidfinder~~~col(bs512)_1__nc_010656_dupe~~~1
265 plasmidfinder~~~col(bs512)_1~~~nc_0106560
266 plasmidfinder~~~col(imgs31)_1~~~nc_0114062
267 plasmidfinder~~~col(irgk)_1~~~ay5430713
268 plasmidfinder~~~col(kphs6)_1~~~nc_0168414
269 plasmidfinder~~~col(mg828)_1~~~nc_0084865
270 plasmidfinder~~~col(mgd2)_1~~~nc_0037896
271 plasmidfinder~~~col(mp18)_1~~~nc_0136527
272 plasmidfinder~~~col(pwes)_1~~~dq26876413
273 plasmidfinder~~~col(sd853)_1~~~nc_0153928
274 plasmidfinder~~~col(vcm04)_1~~~hm2311659
275 plasmidfinder~~~col(yc)_1~~~nc_00214410
276 plasmidfinder~~~col(ye4449)_1~~~fj69640512
277 plasmidfinder~~~col(yf27601)_1~~~jf93765511
278 plasmidfinder~~~col156_1~~~nc_00978114
279 plasmidfinder~~~col3m_1~~~jx51406515
280 plasmidfinder~~~col8282_1~~~dq99535316
281 plasmidfinder~~~cole10_1~~~x0165417
282 plasmidfinder~~~colkp3_1~~~jn20580018
283 plasmidfinder~~~colpvc_1~~~jx13308820
284 plasmidfinder~~~colrnai_1~~~dq29801919
285 plasmidfinder~~~inca/c2_1~~~jn15780421
286 plasmidfinder~~~inca/c_1~~~fj70580722
287 plasmidfinder~~~incb/o/k/z_1~~~cu92814723
288 plasmidfinder~~~incb/o/k/z_2~~~gu25664124
289 plasmidfinder~~~incb/o/k/z_3~~~gq25988825
290 plasmidfinder~~~incb/o/k/z_4~~~fn86883226
291 plasmidfinder~~~incfia(hi1)_1_hi1~~~af25087827
292 plasmidfinder~~~incfia_1~~~ap00191828
293 plasmidfinder~~~incfib(ap001918)_1~~~ap00191829
294 plasmidfinder~~~incfib(k)_1_kpn3~~~jn23370430
295 plasmidfinder~~~incfib(mar)_1_pndm-mar~~~jn42033631
296 plasmidfinder~~~incfib(pb171)_1_pb171~~~ab02494633
297 plasmidfinder~~~incfib(pctu1)_1_pctu1~~~fn54309434
298 plasmidfinder~~~incfib(pctu3)_1_pctu3~~~fn54309635
299 plasmidfinder~~~incfib(pecla)_1_pecla~~~cp00191936
300 plasmidfinder~~~incfib(pentas01)_1_pentas01~~~cp00302737
301 plasmidfinder~~~incfib(pente01)_1_pente01~~~cp00065438
302 plasmidfinder~~~incfib(phcm2)_1_phcm2~~~al51338439
303 plasmidfinder~~~incfib(pkphs1)_1_pkphs1~~~cp00322340
304 plasmidfinder~~~incfib(plf82)_1_plf82~~~cu63887241
305 plasmidfinder~~~incfib(pqil)_1_pqil~~~jn23370542
306 plasmidfinder~~~incfib(s)_1~~~fn43203132
307 plasmidfinder~~~incfic(fii)_1~~~ap00191843
308 plasmidfinder~~~incfii(29)_1_puti89~~~cp00303544
309 plasmidfinder~~~incfii(k)_1~~~cp00064845
310 plasmidfinder~~~incfii(p14)_1_p14~~~jq41853851
311 plasmidfinder~~~incfii(p96a)_1_p96a~~~jq41852152
312 plasmidfinder~~~incfii(pcoo)_1_pcoo~~~cr94228555
313 plasmidfinder~~~incfii(pcry)_1_pcry~~~nc_00581453
314 plasmidfinder~~~incfii(pctu2)_1_pctu2~~~fn54309554
315 plasmidfinder~~~incfii(pecla)_1_pecla~~~cp00191956
316 plasmidfinder~~~incfii(penta)_1_penta~~~cp00302757
317 plasmidfinder~~~incfii(phn7a8)_1_phn7a8~~~jn23251758
318 plasmidfinder~~~incfii(pkpx1)~~~ap01205559
319 plasmidfinder~~~incfii(pmet)_1_pmet1~~~eu38301660
320 plasmidfinder~~~incfii(prsb107)_1_prsb107~~~aj85108961
321 plasmidfinder~~~incfii(pse11)_1_pse11~~~ap00924262
322 plasmidfinder~~~incfii(pseudo)_1_pseudo~~~nc_01175964
323 plasmidfinder~~~incfii(pyva12790)_1_pyva12790~~~ay15084363
324 plasmidfinder~~~incfii(s)_1~~~cp00085846
325 plasmidfinder~~~incfii(sarc14)_1_sarc14~~~jq41854047
326 plasmidfinder~~~incfii(serratia)_1_serratia~~~nc_00982948
327 plasmidfinder~~~incfii(y)_1_ps~~~cp00104949
328 plasmidfinder~~~incfii(yp)_1_yersenia~~~cp00067050
329 plasmidfinder~~~incfii_1_pkp91~~~cp00096666
330 plasmidfinder~~~incfii_1_psfo~~~af40129267
331 plasmidfinder~~~incfii_1~~~ay45801665
332 plasmidfinder~~~inchi1a(cit)_1_pndm-cit~~~jx18297568
333 plasmidfinder~~~inchi1a_1~~~af25087869
334 plasmidfinder~~~inchi1b(cit)_1_pndm-cit~~~jx18297570
335 plasmidfinder~~~inchi1b(r27)_1_r27~~~af25087871
336 plasmidfinder~~~inchi1b_1_pndm-mar~~~jn42033672
337 plasmidfinder~~~inchi2_1~~~bx66401574
338 plasmidfinder~~~inchi2a_1~~~bx66401573
339 plasmidfinder~~~inci1_1_alpha~~~ap00514775
340 plasmidfinder~~~inci2_1_delta~~~ap00252777
341 plasmidfinder~~~inci2_1~~~kp34712776
342 plasmidfinder~~~incl/m(pmu407)_1_pmu407~~~u2734578
343 plasmidfinder~~~incl/m(poxa-48)_1_poxa-48~~~jn62628679
344 plasmidfinder~~~incl/m_1~~~af55041580
345 plasmidfinder~~~incn2_1~~~jf78554981
346 plasmidfinder~~~incn3_1~~~ef21913482
347 plasmidfinder~~~incn_1~~~ay04627683
348 plasmidfinder~~~incp(6)_1~~~jf78555084
349 plasmidfinder~~~incp(beta)_1_beta~~~u6719485
350 plasmidfinder~~~incq1_1~~~he65472686
351 plasmidfinder~~~incq2_1~~~fj69640487
352 plasmidfinder~~~incr_1~~~dq44957888
353 plasmidfinder~~~inct_1~~~ap00423789
354 plasmidfinder~~~incu_1~~~dq40110390
355 plasmidfinder~~~incw_1~~~ef63350791
356 plasmidfinder~~~incx1_1~~~eu37091392
357 plasmidfinder~~~incx1_2~~~cp00341793
358 plasmidfinder~~~incx1_3~~~cp00112394
359 plasmidfinder~~~incx1_4~~~jn93589895
360 plasmidfinder~~~incx2_1~~~jq26933596
361 plasmidfinder~~~incx3(pec14)_1_pec14~~~jn93589997
362 plasmidfinder~~~incx3_1~~~jn24785298
363 plasmidfinder~~~incx4_1~~~cp00289599
364 plasmidfinder~~~incx4_2~~~fn543504100
365 plasmidfinder~~~incx5_1~~~nc_015054101
366 plasmidfinder~~~incx6_1~~~am942760102
367 plasmidfinder~~~incy_1~~~k02380103
368 plasmidfinder~~~p0111_1~~~ap010962107
369 plasmidfinder~~~p1_alpha~~~bn000925104
370 plasmidfinder~~~padap_1~~~af135182108
371 plasmidfinder~~~pec4115_1~~~nc_011351109
372 plasmidfinder~~~pentas02_1~~~cp003028110
373 plasmidfinder~~~pesa2_1~~~cp000784111
374 plasmidfinder~~~pip31758(p153)_1_p153~~~cp000719112
375 plasmidfinder~~~pip31758(p59)_1_p59~~~cp000718113
376 plasmidfinder~~~pip32953_1~~~bx936400114
377 plasmidfinder~~~pjars36_1~~~nc_015068115
378 plasmidfinder~~~psl483_1~~~cp001137116
379 plasmidfinder~~~psm22_1~~~nc_015972117
380 plasmidfinder~~~pxuzhou21_1~~~cp001927118
381 plasmidfinder~~~pye854_1~~~am905950119
382 plasmidfinder~~~rep10_1_repl(pe5)~~~m17990120
383 plasmidfinder~~~rep10_2_cds1(pim13)~~~m13761121
384 plasmidfinder~~~rep10_3_orf(pne131)~~~nc001390122
385 plasmidfinder~~~rep10_5_repl(pwbg738)~~~dq088624.1123
386 plasmidfinder~~~rep10_6_rep(sap093b)~~~gq900442.1124
387 plasmidfinder~~~rep10b_1_rep(psk3)~~~nc001994125
388 plasmidfinder~~~rep10b_2_rep(psk6)~~~sau96610126
389 plasmidfinder~~~rep11_1_repa(pb82)~~~ab178871127
390 plasmidfinder~~~rep11_2_repa(pef1071)~~~af164559128
391 plasmidfinder~~~rep11_3_rep(pefr)~~~af511037129
392 plasmidfinder~~~rep12_1_cds32(pbmb67)~~~dq363750130
393 plasmidfinder~~~rep12_2_cds1(plasmid)~~~ay278324131
394 plasmidfinder~~~rep13_1_orf(pc194)~~~nc002013132
395 plasmidfinder~~~rep13_2_cds39(pssp1)~~~ap008935133
396 plasmidfinder~~~rep13_3_rep(pwbg1773)~~~ef537646134
397 plasmidfinder~~~rep13_4_rep(pkh13)~~~nc010426.1135
398 plasmidfinder~~~rep13_5_rep(pmc524/mbm)~~~aj312056.2136
399 plasmidfinder~~~rep14_1_cds2(pefnp1)~~~ab038522137
400 plasmidfinder~~~rep14_2_orf(pkq10)~~~efu01917138
401 plasmidfinder~~~rep14_3_orf(pri1)~~~eu327398139
402 plasmidfinder~~~rep15_1_repa(plw043)~~~ae017171140
403 plasmidfinder~~~rep16_1_cds8(psas)~~~bx571858141
404 plasmidfinder~~~rep16_2_cds6(psjh101)~~~cp000737142
405 plasmidfinder~~~rep16_3_rep(saa6159)~~~cp002115.1143
406 plasmidfinder~~~rep16_4_unknown(sap056a)~~~gq900478.1144
407 plasmidfinder~~~rep16_5_unknown(pwbg759)~~~gq900401.1145
408 plasmidfinder~~~rep16_6_unknown(sap071a)~~~gq900485.1146
409 plasmidfinder~~~rep16_7_rep(pbora53)~~~ay917098.1147
410 plasmidfinder~~~rep17_1_cds29(prum)~~~af507977148
411 plasmidfinder~~~rep18_1_repa(p200b)~~~ab158402149
412 plasmidfinder~~~rep18_2_repa(pef418)~~~af408195150
413 plasmidfinder~~~rep19_10_rep(pwbg746)~~~gq900390.1151
414 plasmidfinder~~~rep19_1_cds45(plew6932)~~~nc009130152
415 plasmidfinder~~~rep19_2_rep(psa1379)~~~nc007931153
416 plasmidfinder~~~rep19_3_cds20(psjh901)~~~cp000704154
417 plasmidfinder~~~rep19_4_repa(pub101)~~~nc005127155
418 plasmidfinder~~~rep19_5_rep(pwbg747)~~~gq900399.1156
419 plasmidfinder~~~rep19_6_orf34(edina)~~~ap003089.1157
420 plasmidfinder~~~rep19_7_repa(sap019a)~~~gq900385.1158
421 plasmidfinder~~~rep19_8_repa(pwbg759)~~~gq900401.1159
422 plasmidfinder~~~rep19_9_repa(ap071a)~~~gq900485.1160
423 plasmidfinder~~~rep1_1_repe(pambeta1)~~~af007787161
424 plasmidfinder~~~rep1_2_reps(pbt233)~~~x64695162
425 plasmidfinder~~~rep1_3_repr(pgb354)~~~u83488163
426 plasmidfinder~~~rep1_4_repe(orf17)~~~nc011140164
427 plasmidfinder~~~rep1_5_cds6(pre25)~~~x92945165
428 plasmidfinder~~~rep1_6_repe(ptef1)~~~ae016833166
429 plasmidfinder~~~rep20_10_repa(sap057a)~~~nc_013334.1167
430 plasmidfinder~~~rep20_11_repa(vrsap)~~~ap003367168
431 plasmidfinder~~~rep20_1_orf1(edina)~~~ap003089169
432 plasmidfinder~~~rep20_2_repa(pwbg753)~~~gq900395.1170
433 plasmidfinder~~~rep20_3_rep(ptw20)~~~fn433597.1171
434 plasmidfinder~~~rep20_4_repa(sap102a)~~~gq900496.1172
435 plasmidfinder~~~rep20_5_repa(psk23)~~~gq900491.1173
436 plasmidfinder~~~rep20_6_repa(sap059a)~~~gq900480.1174
437 plasmidfinder~~~rep20_7_repa(sap074a)~~~gq900426.1175
438 plasmidfinder~~~rep20_8_repa(sap063a)~~~gq900418.1176
439 plasmidfinder~~~rep20_9_repa(sap055a)~~~gq900414.1177
440 plasmidfinder~~~rep21_10_rep(pkh14)~~~eu164802.1178
441 plasmidfinder~~~rep21_11_rep(psa1308)~~~ab254848.1179
442 plasmidfinder~~~rep21_12_rep(pkh3)~~~af151117.1180
443 plasmidfinder~~~rep21_13_rep(sap101a)~~~gq900495.1181
444 plasmidfinder~~~rep21_14_rep(pkh21)~~~eu350088.1182
445 plasmidfinder~~~rep21_1_rep(pwbg754)~~~gq900396.1183
446 plasmidfinder~~~rep21_2_rep(pnvh01)~~~aj512814.1184
447 plasmidfinder~~~rep21_3_ps0385-3~~~am990995.1185
448 plasmidfinder~~~rep21_4_reprc(psk41)~~~af051917.1186
449 plasmidfinder~~~rep21_5_reprc(pgo1)~~~fm207042.1187
450 plasmidfinder~~~rep21_6_rep(pbmsa1)~~~ay541446.1188
451 plasmidfinder~~~rep21_7_rep(pwbg760)~~~gq900473.1189
452 plasmidfinder~~~rep21_8_rep(sap071a)~~~gq900485.1190
453 plasmidfinder~~~rep21_9_rep(pkh12)~~~eu168704.2191
454 plasmidfinder~~~rep22_1_repb(pub110)~~~x03408.1192
455 plasmidfinder~~~rep22_2_repu(pkks825)~~~fn377602.2193
456 plasmidfinder~~~rep23_1_rep(ppr9)~~~gu237136.1194
457 plasmidfinder~~~rep23_2_rep(pv030-8)~~~eu366902.1195
458 plasmidfinder~~~rep24_1_rep(pwbg745)~~~gq900389.1196
459 plasmidfinder~~~rep24_2_rep(pwbg749)~~~gq900391.1197
460 plasmidfinder~~~rep2_1_orf(e.faeciumcontig1183)_jdoe~~~198
461 plasmidfinder~~~rep2_2_repr(pef1)~~~dq198088199
462 plasmidfinder~~~rep3_1_rep63a(paw63)~~~bth011655200
463 plasmidfinder~~~rep3_2_rep165(pbmb165)~~~dq242517201
464 plasmidfinder~~~rep3_3_rep(pbt9727)~~~cp000047202
465 plasmidfinder~~~rep3_4_cds38(pox2)~~~nc002146203
466 plasmidfinder~~~rep4_1_cds2(pcrl291.1)~~~nc002799204
467 plasmidfinder~~~rep4_2_cds3(pkc5b)~~~af378372205
468 plasmidfinder~~~rep4_3_orf(pmbb1)~~~efu26268206
469 plasmidfinder~~~rep5_1_rep(pmw2)~~~nc005011207
470 plasmidfinder~~~rep5_2_rep(pn315)~~~ap003139208
471 plasmidfinder~~~rep5_3_rep(pwbg752)~~~gq900394.1209
472 plasmidfinder~~~rep5_4_rep(sap047a)~~~gq900405.1210
473 plasmidfinder~~~rep5_5_rep(prj6)~~~af241888.2211
474 plasmidfinder~~~rep5_6_rep(prj9)~~~af447813.1212
475 plasmidfinder~~~rep5_7_rep(pje1)~~~af051916.1213
476 plasmidfinder~~~rep6_1_repa(p703/5)~~~af109375214
477 plasmidfinder~~~rep7_10_repc(pkh17)~~~nc_010284.1215
478 plasmidfinder~~~rep7_12_rep(sap060b)~~~gq900417.1216
479 plasmidfinder~~~rep7_13_rep(psbk203)~~~u35036.1217
480 plasmidfinder~~~rep7_14_rep(mssa476)~~~bx571857.1218
481 plasmidfinder~~~rep7_15_rep(ps0385-2)~~~am990994.1219
482 plasmidfinder~~~rep7_16_repd~~~ay939911220
483 plasmidfinder~~~rep7_17_repc(ps0385-1)~~~am990993.1221
484 plasmidfinder~~~rep7_1_repc(cassette)~~~ab037671222
485 plasmidfinder~~~rep7_2_cds2(pc221)~~~nc002129223
486 plasmidfinder~~~rep7_3_cds1(pcw7)~~~j03323224
487 plasmidfinder~~~rep7_4_repd(pk214)~~~nc009751225
488 plasmidfinder~~~rep7_5_cds1(pkc5b)~~~af378372226
489 plasmidfinder~~~rep7_6_orf(pkh1)~~~sau38656227
490 plasmidfinder~~~rep7_7_rep(pkh7)~~~nc002096228
491 plasmidfinder~~~rep7_8_cds4(ps194)~~~nc005564229
492 plasmidfinder~~~rep7_9_cds3(pusa02)~~~nc007791230
493 plasmidfinder~~~rep7b_1_repj(pc223)~~~nc_005243.1231
494 plasmidfinder~~~rep7b_2_pvga~~~nc_011605.1232
495 plasmidfinder~~~rep7b_3_sap089a~~~gq900440.1233
496 plasmidfinder~~~rep8_1_ep002*(pam373)~~~nc002630234
497 plasmidfinder~~~rep8_2_repa(pej97-1)~~~aj49170235
498 plasmidfinder~~~rep9_1_repa(pad1)~~~l01794236
499 plasmidfinder~~~rep9_2_prgw(pcf10)~~~ay855841237
500 plasmidfinder~~~rep9_3_repa(ppd1)~~~d78016238
501 plasmidfinder~~~rep9_4_repa2(ptef2)~~~ae016831239
502 plasmidfinder~~~rep_1_pkpc-2~~~cp011573105
503 plasmidfinder~~~repa_1_pkpc-2~~~cp013325240
504 plasmidfinder~~~repa_2_pkpc-2~~~jx397875241
505 plasmidfinder~~~repus10__cds25(pssp1)~~~ap008935242
506 plasmidfinder~~~repus11__cds16(ptef3)~~~ae016832243
507 plasmidfinder~~~repus12__rep(pub110)~~~af181950244
508 plasmidfinder~~~repus15__orf(e.faecium287)~~~nzaaak010000287245
509 plasmidfinder~~~repus16__repf(pe194)~~~m17811.1246
510 plasmidfinder~~~repus17__rep(pkks825)~~~fn377602.2247
511 plasmidfinder~~~repus18__rep(pkks825)~~~fn377602.2248
512 plasmidfinder~~~repus19__rep(pdlk3)~~~gu562626.1249
513 plasmidfinder~~~repus1__orf(e.faeciumcontig1258)_jdoe~~~250
514 plasmidfinder~~~repus20__rep(pavx)~~~cp001784.1251
515 plasmidfinder~~~repus21__rep(pwbg764)~~~gq900468.1252
516 plasmidfinder~~~repus22__rep(sap015b)~~~gq900502.1253
517 plasmidfinder~~~repus23__repa(sap099b)~~~gq900449.1254
518 plasmidfinder~~~repus2__repa(pbi143)~~~bfu30316255
519 plasmidfinder~~~repus3__repm200(pbm200)~~~dq437521256
520 plasmidfinder~~~repus4__repa(pci2000)~~~af178424257
521 plasmidfinder~~~repus5__cds20(petb)~~~nc003265258
522 plasmidfinder~~~repus6__rep(pfl1)~~~nc002132259
523 plasmidfinder~~~repus7__rep(phtbeta)~~~ab183714260
524 plasmidfinder~~~repus8__orf1(pog32)~~~loppog32261
525 plasmidfinder~~~repus9__rep(psk1)~~~af203376262
526 plasmidfinder~~~trfa_1~~~cp11611106