Mercurial > repos > jjkoehorst > sapp

annotate rnaseq/cutadapt/test-data/1.axt @ 14:41bfc53ee550

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removal of rnaseq
author jjkoehorst <jasperkoehorst@gmail.com>
date Sat, 21 Feb 2015 17:12:28 +0100
parents a712b378e090
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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11
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1 ##matrix=axtChain 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
2 ##matrix=axtChain 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
3 0 chrX 3022176 3023241 chrX 132722808 132723933 - 67671
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
4 tcttcatgtgacttgcttgtgccttttaggacctgctcaagcctgatcacatatgtacaacttccagttgataatggattgttgctgtgcacaagctactttttagcttcattggttagataatactcagctcatgagatgcaggtcagattacatggcaatttggtagctcattgtcaaatgtttagtttctactgagacctaatatcaggccaagaactgtcactcaaatagagaatcgctatctgcaaaaatcatttgtccaaagtacctagggtttc----atctgtaatacatgtgtaggggcctgctaaatgctccaagcagcatccccatctgccactgtcacctc---atgtgcc--------------------------tagtcatagaaaaacatgcacagcagcctggacctgttaaagaaacttctcctatttctgtacccacacaaagctagcttctcttcaagtcacttggtatatggTATGCTTACCTTAATCTGTTGTGTGAGCCATTTATTAttattttcccattttctgactgtataatttggatattatacttataagttggcagaTATATG---------CATCAGAACATGGAATATGTTGGAAGAATCAAAAGGAGAGTTAGAAGGGGGCAATAGGAAGATGAACATAAACAGGGTACGTACAGA---------------AAATTTTTCAAAGAATAAATAAAACCATTAAAAAAACAAACAAATATACAATGACCATAAAATATTGCTATACTAAATTATAAAA------CAGAAATATTTATATGTACAAAGAAACAAATTCCAAGCCAGAAATTCAACAGGGAATATACAGCATAATAAGATATATATCAATTAGAAAAA-TATCAAATTAAAATTATAAGCTAGAAAGTATTAAAGGGAAAAAATGGATGAATTTAATAGCTTA-------TGCTTAAGAATAATTGGCAAATCAGAAGCCTTGTAAGAAACAATAGAAATAAAGTTT-AAGAGGAATAGAAGAGAAAAATAATAATGCTGAAGGCAGAGGTCAGCATAACAGGAGTGTGAATTGGAATCTCAGACTCACAGGGAAGGTAGAAAGAAGCAGAAGATATTTAAACAAataaa
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
5 tcttcatgtgacttgcttgtgccttttaggacctgctcaggcctgatgacacacatataacttccagttgataatgcattactgctgtgcacaagctatcttttggcttcattggctagataatactcagctcattaggtgcagttcagatcacatggtaatttggtggctaattgtcaaatgtttattttctactgagccccaatatcagtccaagaactgtcactcaaatagaggattgttgtctgcaaaa-tcatttgtccaaagtccttcgtgtttctttcctctgtaatttatacataggggccttctaaatgctc-aagcagcatccctatctgccactgtcaccaccacaagtgccctccagtctgctggatcataaaatcctagtcatagaacaacatgcacagcagcctggacctgttgaagaactttctccaattcctgtactcacacgaagctagccactccctaagtcacttggtatatgCTATGCATATCTTAATCTGTGGTGTGAACTACCTATTATT----TCCCCGTTTCAGACTGTATAATTGTGATAATATATTTAGAAGTTAGtatatatataatatatatatatCAGAATATGGGATATGCTGAAAGAATCACAAGGAGAGTTAGAAGGAGGCAATAGGAAGATGAACATAAACAGtatatatatatatatacatgtatatataATTTTTTCAAAGAATAAATAAAAATATTGTAAAAG-AAACAAACACACAATG-TCATAAAATATTGCTCTACTATATTATGAAATAGCAACAGCAATATTTGTATGTACAAAGAAATAAATTCCAAGCCAGAAACTCAGCAGAGAATTTACAACATAA---GGCATTTATCAATTGGAAAAAATACTAAATTAAAATTATAAGATAGGAAGTATTCAAAAGAAGCA-TGGATAAATTTAATAGCTCACTAAGAATGCTTAAGAATAATTGGCAAATAAGAGGACCTGCAAGAAATAATAGAAATAAAGTTTTAAGAGGAATAGAAGATAAAAATAAAAATGCCTTAGGCAGAGGTTAGCATAACATGAGTGTGAATTGGAATCTCAGAGTCACAGGAAAAGTAGAAAGAAGCAGAAGATATTTAAAGGAATGAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
6
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
7 1 chrX 3025132 3025662 chrX 132731310 132731841 - 23012
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
8 ggagaaagggaatgggggatga-gagtgggactgggaggagaggagggaggagaggctgtaatcaggatgtaaagtgaataagcaaataaGTTAAGGAAAACAACAACAAAAAGAAACTGGATTAATTTCAATTTATTCAAGAACATTGGTTATTTCCATTAAGTACTGTAGTATTATGTATATGAATATAAAAATCCTTTCATCAAAGCAAGGAAGAGAGCACAAAGCTGCCCTTAAGTCATTGAAGACCTGGAGCACCTATGGGCCTCCCAAGAGGTTCTCACAAAACCTACAACCTCCATCCCAAGAGCCTGTGTCTGACAGAGCTGGTATGAGAAAAGGAGACAATTCTTCCC-----CAGG------------TTTTAGCCAGACTTTGAGTACACAATGGGATAGTGAGGAGCC----------------------CAGTGAAAGCAA------------TTAGTGATTTGGCCTGTGACCCTCTAGCACAATGTTTTGCAGGTCCAGTTGGACATGACATGTTTTCATTGGAAAGGCACATTTATAGTACCTAATGACAGCCCATGTCAA-GTGGCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
9 ggaggaggaggaggaggaataacaagaagaagaagaagaagaagaagaagaagaag--------aagaagaagaagaagaagaagaagaag--aagaagaagaagaagaagaagaaACAGGATTGATTCAAATTTATTCAGGAATACTAGTTATTTCGAATAAGCCCTATAGAATTATGTACATGAATCAAAAAATCCTTTCATCAAAGCTAGAAAGAGAGCACAAAACTGACCATAAGTCATTGAATACCTGGAG-----------------------------------------CTCCATCCCAAGAGCCTATGTCTGGCAGAGCTGGTGTGAGAAAAAGAGGCAATCCTTCCCTGCTGCAGGAATAATCAAGCATGTTGGCTGGACCTTGAGTACACATCAGGATAGTGAGGGGCCTGGCAAAAAGCACAGACTATGGCACTGAAAGAAATTAATAAGGGACTTAGTGATTTGGCTTATGACCCTCCAGCACAATGTTTTGCAGGTCCAGTTGGAGATGACATG-TTTCATTGGCAAGCCACGATTATGGGACTTAATGACAGCCCCTGTCAAGGTGGTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
10
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
11 2 chrX 3030008 3030565 chrX 132731842 132732393 - 30932
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
12 CATTGTTTTTGACAAATCAGTTTCCTTTAGACTACACCTTCAAGCCACTTAAGGTTGCATTTACAACAAAAATTTATAATCTAAATATCAACAGTAATGGCAATATTTATCTTGATAATCTCAGATCACAGTGTCTCCTGCTTTAACTA-TTTCTAATGTTCATTTATCCATTTGTTCACTGCTATGTGATCCAAACCCTGATGATCTCCTAGTGCCAGAGACTGCACAGATCT--AAAACAGATAGTGATAAATACAACAGAATATCTTGGGAATGGACTCAGAAGTATGCCATGTGATGTTACCTTAAAGTCAGAATAACTTGCATTTTATAGCTGGAATAAACTTCAAATTCCTATTCCTTTTTTTGATCTCATGTTTTTCATTTT--TTTCTTTTTATTTCCCTCCTTTCATTCACATGTTTATCTAAG-AGACTTAAATTCTTTCAGCTTTAGACAATAACTACTTTTAGAATCTGCAAAGTAGTTACAAGAAAACAGTTGCCCAAGATTCAGAATCTTTTTAAAAAACTGGAGCTTGTCCAGATACA-TATGTAGCCAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
13 CATTCTTTTTGACAATTCATTTTCTTACACACTACCCCTTCAAACCACCTATGAAA------ACAATAAAAATTTATCATCTAAATATCAACAGTAATGGCAGCATTTGTCTTGATATTCTCAGATCACAGTGTCTCTGGCTTTAACTAGTTTCTAAATTTCTTCTATCCATTTGTTCACTGCTATCTGATCCAAACCCAGATGACATCCTAGTGCGAGAGCCTGCATGGATCTCTGAAACAGACAGAGGTAAGTACAACAGAATATCTCAGGAATAGACTCAGAAGTATGCCATGTGACGCTGCCTTAAAGTCAGAATAATTTGCA--TTACAGCTGGAATGAACTTTAAACTGCTGCACC-TTTTTTGACCTCatttttttaattttaaattttGTTTATCTCCCCCCATTCATTCATGTGCTTACCTGAGAAGACTTAAGTTATTTAAGCCTTGGATAATAACTGATTTTACAAACTATAAAGTAGTTACAAGAGAACAATTGTCCAAGATTGAGA----TTTAAAAAAGAAAAAACTGGAGGAGGTAGATTATGTGGCCAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
14
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
15 3 chrX 3030576 3032510 chrX 132743487 132745311 - 109736
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
16 ttgtttgagacagtgtttctctgtgtagccacatctgttgtggaactcaatttgcaaatcaggctggcctcaaactcacagagatctacctgcctctgcctcttgagtgctagtattaaaggcatatgcaaccactgcctggctaaaataatatttttaaaataaCATGGTTACATGCCAAATTGACAAGGGGTGGATA------AGCCTATACtgatagataatttcacagaatctagaaacaccctggggaaaaatgtttgcacatgcctggg----gccagggagat--gttaatttctttggttatcgaaggagggagacctaatctaattgcctaa-tgaatgaaaagaagtaagtgaagtacctgagctcatctcctgttggttcctaaatgcaaaagcaatgagaccagctagcctcctgtttcttccatttctttcgccaatatcttctctgctatgatggattgtctttcttaaattgattgccaaaatcatctcttattttcttaaattgtttcttgttggttattttgacacatctatgagaaaaggaactaatataGAATGGACATGGTGGTGACTTGGAAAAGTTATGGAGTTACATATGA-TGACCGTGGTCTGACCAGGAAGAGACAGGGACAGATAGTCCAGGTGTCTAAGCACAAAAAAGTAAATAGATATGTCTCAGATAACTGAGAGCCCTATGTGGTTAACAAGCAATTGGGGCATACCAGGGCTTACAAATAAATGCTCTATATGATCCATGTTTCACCTTCTACTTTCCTTCATTGTTACATCCTACCCCATCACATAAAGAAAATATcacacacacacacacacacacatacacacagacagacagatagactgacacacacaaacacacacacacacacagagagagagagagagagagagagagagagagagagagagagagagagagagagTCAAACAGCATTTAATTCCTGTGTAGCAACAAGGACATCTTGCATGCAGTTCAGTCTGGTTAAGGAATGGGAGAAGCAAAATGAGGCTTTAGTCAATGATAGAGGAAGGAAGGGATTTAGATGGGTCTTGAGGCTTTGAAGATGAAGTATTAACCAGGTTGCTTGAAAGATCGCTGTGTCTTCCCTTTTGATGACCCCAAGCACAGAGTACATCACCGTTGTCTTCATATTCTTTTTCACTTTCTGAGGAGCTTTCACCAAAAGCACGTTGCTTTTCATAAACAAAACAACATTTGGATGAGCGACGGCCCAAGTGTTCATTGTCAATAGTGTCACTAGAACACCCAACCTTATTGCCTGACTTCCCCTTCTCTAACTTGTTGGACATATTGCTACTTTTTGGCTTATCACCCAGAACAACTGTGGGATCTGAGATGGATCTTCAGTCAGCTTAG------------------CAGAACTGGAAGCCTGGCAGAGGAGAGAAATCAATGTATCCAAAGAGTCTGAGGAAATAGGAATTTGAAATCAAGTCAGAGTCACAATTAAAATTTAATGTTGCAATTATTTTTATCTTAGAATTC----------GTACACAACTTACTCTTGTTTCTCAGTTGTTGTATGTTCAAATTCATATTTTGAGATCACAGAAAATAATTTGGTTATAAGGGAAATGGTAGAAAGAAAATTTGGGTCTGACTATTTCATTTTCCTCCTGTCAAATGAAAAGGCAAATGCTACCTCTAAATACATATCTTTGTGAAAATAAGATTAGAGAAAGCACCACATGGATTTTAACTTCTGATTTTACTTGAGTAATAACAACAGATACACATGA-TCATTATTTATTTCTGCC-ATATAAGTGATTCTCTGAGTAAGTCTATGGCCTCCTATGTGAACTGATGAGGGTTTGAAGATATGGCTAGAAAAGAACTCAAGTGCCAGGATATAATGGGAATCCAAATTTCATACTAGAATCCTTCAAGAATTATTAATTTA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
17 ttgtttgagacaggatttctctgtgtagtcgcatctgttctggaactcattctgtagaccaggttggcctcgaactcacagagatctggctgcctctgcctcccaagtgctaagattaaaggcttgtgccatcattgcctggctAAAATAATATTTTTAAAACAACATGTTTACATGTCAAGTTGACAAGAGGTGGACTtgtgatagcctatacttatagctaattttacagcatctagaaacaccctgaggacaaatgtttgggtgtgcaggggcagggcgagggagtgcagttaatagctttggttagcaaaggtgggagacctagtttaactgcctgactgaatgaaaataagcaagtgcggtatcagagctcatctcctgttgcttcctaaatgcagaagcattgggaccagctagcctcctatttcttccatttctgttgccc-catcttccctgctatgatggaataacttccttaaactgattgccaaaatcatctcttatttccttaaattgtttcttgtcagttattttgacacatctatgagaaaaggaactaatataGA-----CATGGTGGTGACTTGGAGAAATTATGGAGTTTGATGTGAGTGAACATGTGTTGACCAGATGGAGATAGATACACATAGTCCAGGTATCTAAAAATTTAAAAA-AAATGTGTATG-----GAGAACTGAGATCCCTATGTGATTAACAAGCAACTGTGGCATACCAGAACTTACAAATATATACTTTATATGATCCATGTTTCACCCTCTGCCTTCCTTCATTGTTACATTCCTCCCCATCACACAAAGAAGACACATCTcacacacacacacacacacacacaca----------------------cacacacacacacacacacaca-------------------------------------------------AGAATCAAACAGCATTTAATTCCTGTGTAGCAACATGGACATATTGCATACAGTTCAGTCTGGTTTAGGGATGGGAGAAACAAAGTGAGACTTTAGTCAGTGATGGAGAAAGGAAGGGATTCAGATGGATCTTGAGTCTTTGAAGATGAAGTACTAGCAAAGTTGCTTGAAAGATCATTTCTTTTTCCATTTTGATGAC-------ACAGAGTTCATCCCAATTGTCTTCATCTTCTTTTTCGCTTTCTAAGGAGCTCTCACCAAAGGCACATGGCTTCTCAGAAACACAACAACATTTGGATGAGAGACGGCCCAAGTCTTTGTTGTCAGTAGCGTCATTTGACCACCCAACCTG---GCCTGACTTTGCCTTCTATAATGGGTTGGACATATTGCAATTTTTAAGCTCAGGCTCCAGCACAACTGTGGGCTCTGAGAT--ATCTTCAGTCATCTTAGATGTTGAATCTTCCATAGCAGACCTGGAAGCTTGGCAGAGGAGAGAAATTCACGTATCCAAAGAGTCCAAGGAAATAGGAAATTGAACCCAAGTCAGGGTCACAATTAGAATTTAATGGTGCAATTGTTTTTGTCCTGGAGTTCTTACCCTGAGGTATCCAACACACTCTTGTTTCTCAGTCTTTGTTTGTTCAAAGCCCAATCTTGAGATCAAAGAAAATA-TTTGATTATGAGGAAAATGGCAGAAAGAAAATCTGGGCCTATCTACTTCAATCCCCTCCTGTCAGATGAAAAGGCAAAT-------------ACATGACTTTGTGAAAATTATCTTAGAGAAAGCACCACATGAATCTTAACTTCTGATTTTATTTGAGTAATAACAACCAACACACACAAATCAATATTCATTTCTATCTATATAAGTGAAACTCAGAGTAAGTCTATGGACTAATGTGTTAACTGAT---------------------------------------------CAAAAGGAATCCGAATTTCATACTAGAATCCTTCAAGAATTATTAATTTA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
18
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
19 4 chrX 3032511 3033698 chrX 132745428 132746659 - 78115
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
20 TTGTACAAAGAATGTAATTTACTGTGTATCTAAATTTTAATGACATACCAATATGACGGCAGGAAATGGATAGTTTAGAGACTTTGGAGGTTAGTTATTAATATAGATGAGTAAATAAGCATGAACCAATGTCAGTAGTGGTGATAAACAGAACGAAGACAATTGTAGATAATTTGGTCACTGAAA-GGGAAAATTACTTGTTATTAAGGGTGGACATAAATTAGAATGGGGGCAACATCAGACCTGATACAGAGGAGGACAAGACCAGGCCAGAAAAGTTAGCAAACTAATAACCATTGAAAATCAGAATCCTTGGGTTTTAAGTGGCCCACTTTATAACATACCCATTTAATTA---GAATCTCCAACAGGTCTTTCTGGTCTTATCTAGATATTTTGTCAGCAGAC-ATCCTTAGGAGACCAGTTTTGCTGTGGCTTTGTTGTGCTTGCTTCCATGACAACTAAAGACACAAATAGAATGTATTGTTTCTATCCCCCAAGAGACCTGCCTTTGAGTAGTCAACCTACTGATTGACTAGCAAAATAGTTTACCTTATACATTCTTGTGTCATGAGGGACTAGACCTTTACAAAATAAATAAATTGAATTTAAAAACCC---------------------------------------CACAACCTTAAGTCATTTTAATTCCTGTCAGTGCTTGGCAAGGCCTGAGAATTTCATCTACATTATGGAT-CTGTTAAAGCTCTGGTCCTCAAATTTAGGTGTCAGAACTTCTTGAGAAAATTTTCATCAGTGTATACTTATTGAATAAAGCAATGGGTTTCATAAGGCTGCCTTGTTTAAA------TATATCACTTACTTTGACTATATTCACTTTCCATTACTCTCTTCTATCTC----CCACAAGTGTCCTTTTCCATGTTTAATACA--TTTTTTAAAATAACATGTCCTCAGTTCCAACCCAGAAAGTCTAAAATCCAAACCTGCTATAAATCTTTTAATGTTTTACATTCTAAAAGTATGACTGAAAAGTGGTTTGGAAACATTTTTTGGGTCAACATGTTGTTGGCCAAACAAAATATATCAGCAGCCAAAGTCTAGCTCATGATCCCAAAGCATACAATACCAGTAGACTTTAAGTTTTTATTTAATTCTTTTAAAATGTATGTGGGTGACATCTTTGGTAAAATTTTAAATGATATCTGTATAGGTAACTTTAGAATAACACaaataaaaatattt
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
21 TTATACAAAGAATGCAATTTGCTGTGTATCTTAATTTTAATGAAGTAGCAATGTGAAGACAGTAAATGGATTGTT-AGAGATTTTGGAGTTTAGT----AATGTAGATGAGTAATTAAACATTAACTAGCATCAGTAGTAGTGACAAGCAGAAGGAAGACAACGGTCAGTAACTTGGTCATTGAAACGGTAAAATTACTTGTTATTAAAGGTGGGCATGAATTAGAATGGGGGCAACACCAGATCTGATA---AGGAGGACAAGACAAGGCCAGAAAAATTAGCAAACTAAAAACCATTGAAAATCAGAATCCCAGGGTTTTAAATGGCCCACTTTATAACATACCCATTTAATTATTAGAATCTCCAACAGGTCGTTCTGATCTTATCTAGGTACTCTGTCAGCAGACTACCCTAAGGAGATCAGTTTTGCTGCTGCTTAGTCGTGCCTGTTTCCATGACAACTAAAGACACAAATAGAACGTAC-ATTTCTATCTCCCAAAAGACCTGACTTTGAGTCATCAACCTACTGATTGACTTGCAAAGTAGTTTACTTTATACAAGCTTGTTTCATGAGGGACAAGATCATTATGAAATAAATAAATTTAATT-AAacacacacacacacacacacacacacacacacacacacacacacacacaGCCTTAAGTCATTTCAATTCCTGCCAGTGCTTGGCAAAGCCTGAGAATTCCATTTACATTATGGATTCTGTTAAAGCTCTAGTCCTCAAATTTATGTGTCAGAACTT---AAGAAATTTTTTATCAGTGTATACTTATTGAACAAAGTAATGGGTTTCATGATGCTGTTTTGTTAAAAAAATCATATACCATATATTTTGTCTATATTCACTTTCCATTACTTTCCTCTATCTCTCTCCCACAAATGCCCTTTTCCATGTTTAGTAAACTTTTTTTAAGATTACATGTCCTCAGTTTCAACCCAGAGAGTCTAATCTCCAAACACACCATAAATCTTTTAAATTTTCACATTCTGAATGTATGACAGAAAAGTGTTTTGGAAACATTGTATGGGTCAACATTTTGTTGGCCAAACAAAATATATCAGCAGCCAAAGTCTAGCCCATGATACAAAAGTGTGCAATCCCCGTAGATTTTAGGTTTTTATTTAATTCTTTGAAAATGCATGTGGGCGTCATCTTTGTTAAAATTTTAAACTATGTCTATTTAGGTGACTATAGAATGACACaattaaaaatattt
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
22
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
23 5 chrX 3033699 3034238 chrX 132747054 132747589 - 33753
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
24 aaaaataaCAGGTCCCCAATGACAACATTTTACGTTGTCACGAGTTTATTAAATCTCAATTATGGACATTGGCAAAGAATTATTAATTAAACAAGAAGCCTGCTTGAGAGCAAAGCACCTTTTTACTTGTATTCATCA--GGGTTTTT---TTTTTCTTTTTGTTATATAGTTCAGT---------TCATGTTTTGGTTCGTGCAGACATCATTGCAGTTAGCACCTAGAAATATTCCAACCTCTCAAACTATCTCTTCCTACCCACATTATTAAAAATCttcttgatccctggcaataatgatttgtgctccatctgtataaattcattatctatataatgtattgtaaaggaattatagacattttgaaattggatttttttcactctctgtaatgcccctgaaacttattcaattattgtttcttctttattattgctgactagtgttgcatttatgaattaacaaagttgttgaagatatttaggttgttttcatttttgaaactatcatgaataaagttatagtcaatactcatacaagacttgtcaga
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
25 AAAAATGGCAGTTCTTCAATGAGAACAGTTTATATCATCACAAGTTTATTGAAGCTCAATTATGGACATTAGCataatattattaattaaattaCAAGCCTGCTTAAGAGCAAAGCACCTTTTTACTTGTACTTATCACTGGGCTTTTTCGTTGTTGTTGTTGTTATATAGCTCTGTTCAATTGTATCATGTTTTGGTTCAGGCAGACATCATTGCAGTCAACACATAGATAG-----------TCAAACTATCTCTTACTACCCACATTATTAAAAATCttcttgatccctggcaataacaatttgtactcc-tctgtata----cgttatctagacaatgctatgtaaagaaattacagacattttgaaattggatttttttcactcagtgtaatactcctggaatttattcaactgttgtttcttctttgttattgctgactaatgttgcatttatgaattatcagagttgtt-aagatatttaggttgtattca-ttttgaagctatcatgaataaagttgtagtgaacacttatacaacatttgtcaga
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
26
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
27 6 chrX 3035181 3035230 chrX 132747590 132747639 - 3318
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
28 gtgcataagttttcctacttctagaataaatgcctaaAGGATATGGCAAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
29 gagcatacattttcctacttctagagtgaatgcGTGAAGGATGTGACAAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
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30
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
31 7 chrX 3035231 3035841 chr9 84391632 84392261 - 18947
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
32 ACTTGtttgttttgtttattagatattttctttagttacatttcaaatgttattccctttccaagtttcctctccaaaaacactctattccttctccctttcccctgctcaagaa------------cccacccactcccacttc-ctagaactgtctgtcccctgtaccggggcttagaacaac-acaggaccaagggcctcttttcccatcgatgaccaactaggtcatcctctgctgcatatgcatgagtaggccc---------tctctgtattttctttgattggttgtttagtcccagggagcttaggggtgg-tggttcattcatattgttgttcctcctaggggaatgcaaatcctttcagcttcttgggaaatttctttagctccttcaatggggatcctgtgctccttctaatggatgactgtgagcatccacttctgtattagtcaggcactggcagagcctctcaggagacagctatatcaggctcctgtcagcaagctcttgttggcatccacaatagtgtctagttttggtgtttgttttggggatggatccccaggtagggcagtctctggatgatcattccttcagtccctgcttcacactttgtctctgtaactgctt
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
33 ATTATTTttctttctttattcattattttatttatttacattttaaatgttgcccctcttcctggtcccccctcaaagagttctttaccccttct-ccttccccttgcttctgagagagtgatccccaccacccactcctacttcacccccactagcattccccttccctgggacatcaagtttctactggattaagtgcatcctttcctactgagattagaaaaagcagccctctgctacatatgtactgg--ggcccacagactagcccatgtttgctctttggttggtgggttagcctctgggagctccgggaggtccagttagttgctactgttgttcttcctatggggttgcaatccccgtcagctccttcagtccatcccctaactcttccataggagtctctgacctcagtccgaaggctggctgtaaataactgcatctgtctcagtcatctgctggtagagcctctcagaggacagcaatgctaggcttctgtctgcaagcacaacatggcattaataatagtgtc-aggtttggtacctctgcatgggatgaatctcaagttgcgctggtctctgtatggcctttctttcagtctctgccttatg-tttgtccctgcatttcctt
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
34
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
35 8 chrX 3036436 3036947 chrX 132751812 132752320 - 32759
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
36 tagaaatacctaaacgtctataggaattcactgACAGAAAGGAAAGGTGATGCTCAAAGTCTCAGGGCAGTGCTACAATGCATAGGCAAGCAATACCATTTAAATGGAGAGATTTAAAAAAAATCATTTCTTCACCCATAAACCAGAACCAATTATTCAATATGGTCAAGTACCATGTTTTATTAGAGTTATTTCTGAATTAGATCATTGAACAGGATTCTAACCTAAATAACAAATTT-TATCTAAAACATTTTCTAGACTAAAAAGCATGCTTTGAGCCCTCCTTAAATAAAAAGGCCCATAGTGTATGAAACTAATCAACCATAGATCCTATATTTACTCCACCAATCCTCAGGACAGTTTATACTCTTtgtcctagttgggattttatttatgtgaacagacatcatgaccatggcaagtattataaaggacaacatttaattggggccggcttacaggttcagaggttcaggccattatcatTG----TATTAGTCAGTGTTCTCTGGAGCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
37 TAAAAATGCCTAAATTTCTATAGGGATTCACTAACAGCAAGGAAAGGGGATGCTCAAAGGCTCAAAGCAGTGCTATGATGCATAGGCAAGCAATATCATTTAAATAGA-----TTTTAAAAAATCATTTCTTCAACCATAAACCAGAACCAATTATATAATATAGCCAAGAAAGATGGTTTA---GAATTATTTCTGAATTAGATCATTGAATTGGATTCTAACCTAGATAACAAAAAAATAGCTAAAACTCTTTCTAAACAAAAAAGCAAGCTGTGAGCCCTCCTTAATTAAAAAGGGTCATAGTGTATGAAACTGATCAACCAGAGACCCTGTATTAACTCCACCAATCCTCAGAACAGTTTATGGTCCTTCtcttagttatagttttattgctatgaatagacatcatgaccatggcaagtcttataaagcacaacatttaattggtgaaggcttatgggttcagaggtccagtccattatcatTGTATTtattagtcagggttctctaaagtc
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
38
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
39 9 chrX 3040802 3041403 chr5 51053187 51053738 - 12815
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
40 ttttggttaaatggtctggg-ctgtgtattccttgcatctttttgggtgtatttacacttcttttcatgcagaatttttctttctagtttcttgtgtagtactgaattgctggatagatattacttaaatataataatatttgttttttaaatcaggaaatggtcttatttctccactgattataattgatagttt-gctaggtgttgtggtcctggctggcatt---ttttggtctttcataatg----tgtagaccatttgcccaggccctttgagctttcaaagtctccattaaaatcaggtt------ttattataatgggcctgactttatatataacttggtctttttcccttgcagatttcatatcatttctttgttctgtacatttaagtgttttcattattatgtgtcataggaaagggtgtgtgtgaacttttctagtcctgtctggggtgtgttctatatgcctcttgctccttgatatttcactcttgcactatctatgtctaggatattttgtt--------------aaaatattttctgtgcctttgacctgagctttgtctcctttttgtaaacttatcagtcataaattttggtctgtacatagtgtcccagat
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
41 ttttagtaaactgttcagggattacttgtttcttgtgtcctcttgggtagagctaa--------ccagaatgaagttgtccttctagtgtcttctgtagagctgattc--------------atttaaat-tccttacatttgttttt---attatgaaatgttttcctttctccctcagttaagattgctggttttgctggccatggtagtccgggctggcattatgtcattgttgttcataacaaacttgtaaaatgtctgcc-aggccctctg-gcttttaaaatctcgattgcaagtccattggaaagctctgctaatgaccctgtctttatatgtgacttcatttttaccc-----------------atatccttgttctgtacatgtacgtgcc---------------------aaggagagttt-----cttttctggtcctgtctgtctggtgtcctgtatacctcatgtacttcgata----ggaattgctttctttagatttgggatattttattctatgattttgttaaaggtattttctatggcttttacctgagtttcttctccttcctttatatcaattattcacaggttt-ggtct---cttcttgtcccagat
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
42
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
43 10 chrX 3042537 3043219 chr5 51053739 51054217 - 9161
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
44 TCCAGATAGTCTGATGTTTTGTGTCTAGATTTTTTCCATTTACTTATTTATtttatttacttattcactttatatcccaatcacagctgcccctactcacagtctcttcctcacaatctttccctcaccccctccccttgtcctctaagaagggggaccccctgggttccaacccacactgTTGTTCCTAGATCtttaagatctaatatttccaatgtcagagatatccattccttccacgttgttccccagaccttaaatt----ctttcacttcattaaatcagttgattaggcttttctctgaggtctttgtttgacttcctgagtttttatt-ttcaagtcttatttcagtttgggtta-atttagtcattctacttctttgtcatattgtattttcatag-ttgaattgtttacatttcctcagtcaactatttttgtcttcagagttctcagtgaaacatttatt-catatcct-tttaaggtccttgaacatatgcataattgctattttgaagtccttaccacatacttcaatctaaattattctttcttagggaatattatagtaaggggttgtttctggtggaggcatattgtcatcactgtttatgtttgttgttttttgtttttttttttgtttttttgttttttgcttttttgCATTGGGATCTAAATATCTAGATTCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
45 tcc------ttgaatggtttttgcctagagttt--------------------------------aaatttatatt--------------------taacaagctctt--------------------------------------------------------------------------------tggatgattga---------------------------tccatttcttctactttgtcttcaggacctgatattttctcttccacttcattcaat-agttgacgaggctttcttctgagcctgttgtgtgacttcctgctttttttcaattcaggttttacttcaggttgacttgtctttagccagtctatccctttgttaacttctattttcttatcttgaattgtattcattatttcattcatttgtttatgttttcttgatcttcattcaggcatttttttcacagcttctttaaggtc-------atattcataattgctattttgaagtccttgtcttgtgcttcag-ctaagctgatctctc--agggactatgataataggtgctggtttccagaggagacgtagtgtctttgttgtttatgtttgtg-------------------------------------tttttGACATAGGATCCCAGTGTGGATATTGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
46
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
47 11 chrX 3043248 3043585 chrX 132759268 132759608 - 22408
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
48 TGTATCTATTTTTGCCTTTTGGGTAGGCATTTAGTTCTTTGGTTGCTATTACTCCTATCTGACAAGTTGTCAACCATCAGAATGATACTTGGTTCTCATTCTTTGAATCACTCGGGATTTTAATATTCGGATTCCAACTTGTACTGGATAGGATTTTCTGGTTGCAACTCTGTGTTCAAACCATAAGCTGTCCCAGATCAATTCAGTGGGTTGTATAGGTAATAGGCTAGCAGTTGAGGAGTGGAGACTGACTCTGGACGTCTTCTAGGTAGGGTTTAGGATCTGGCTCTTAGGGTCAGG---CAAGGCAGAATTATTGTACATTAGTGGCAGTTAGTGAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
49 TATAACTATTTTTGCCTTTTGGGTAGGCATTTGGTTCTTGGGTTGCTATTACTCTTACCTGACAAGTTGTGAACCATCAGAATGATACTTGGTTCTCAGTCTTTGAGTCACCCTGGATCTTAATATTCCAATTCTAACTTGTATTGGATCTAATTTTCTGATTGCAACTCTGGGTCCACACCATAAACTGTCCCAGATCAATGTAGTGGGTGGTTTAGGTGATAGGCTAGCAATTGGAGAATAGCAACTGACTCTGGAGGTCTATTAGCTAGGATATGATATCTGACTCCTGGGAAGAGGGGCAGAAGCAGAATTAGTGTACATTAGTGGTAGTTAGTGAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
50
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
51 12 chrX 3044072 3044955 chrX 132759936 132760824 - 57490
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
52 GTGATGAATCCCAAGGGAATGGATATGGGCTTCAAGGAGGGGTTGAGGTGGGCAGGCACGGAGTAGG----TTTAAGGGGAATTTAAAGAGACTAGAATCAAGAAGATGAAGTAAGGCACAACCAGCCTGTCAACATTCATTGTCCTATGCATATCTGTCTGTAAGACCTAGGATTTGAAGACTTTAAAGAATGAAGCAGAACACAATCTAATACTGTAGACAACTTTATTTCAGTTTCAGTGTTTTTATTCAAAAATTTAATAAAGTAAGCAATGATTCAAGGAAGGTTGTTTGAGTTCAGAAAAAC----ATAAAAGCCAGCAAGCACATGCTAAATATTAACCGAGCAGCTCTTTCAGAGAACTTTCTTAAGACAGACCAATTTAAACACAAATGCCTAGCACCTATTATA---GACTATATCTGAGAAAGCTTGAAAGCAAGGCAGAAGGCCATAACCAGATTCAGGGTACACTGAAAAAAACACTCAGCCTATCCTTCCACCAGACTGGGCTCTGTAGTTGTCTTCCAGCATTTAACATGAATGAATAAACATGCCTTATGAATTGAATGTAAATACTTGACACAGGAGTCATGAAATCACATCCAAGAAAAATACAGGGAACAAAATCCACCTAA-GGAGTGGGAGGAACAGCTTCTTCTTTTTCCTCTGGAACCTCTCTAGCTTCTCTCACAGTTCCCCAAGGCATTCCCT--ATCATGTACCTCAACAGTAGCAGCCTACGTATGTCTCAGCCATATTGGCCATGGATCAATAGAAGAGAATGGAGAGCACAAAGTAATGGAGATGGGCTGGGAGGAATGGCTTAGGTGAGTGCTAGAGCAAAATCTAGGAAGACTCTGGACCTAAGCCACATGTGACATTCCACCCCCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
53 GTGATGAATCCCAAGGGAATGGATATGGACTTCAAGGAGGGGTTGAGGTGGGCAGACACGGGGGGGGGGGATCTAAGGGGAATTTAGAGAGACGAGAATCAAAAAGAGAAAATAAGGCACAGGCAGCCTGTCAACTTTTGTTTTCCTATGCAGATCTGTCTATAAGACCTGGGATTTGAAGACATTAAAGGATAAGGCAGAATACAGTCTAATGCTGTAGACAACTTTATTTCAGTTTCAGTGCTTTTATACACAACTGTAA-AACGAAAGCAATGATCCAAGCAAGATTGTTTGAATTCAGAAAAGCATAAATAAAAGCCAGCAAGCACATGTTAAATATCAACAGAACAACTCTTTCCAAAAAC--TCTTAGGACAGACCAATTTAAACACAATTGCCTGGCACCTATTATACACTACTACATCTAGGAAAGTCTGAAAG-AAGGCCAAAGGCCATAACCATTTTCAGGGTACTCTGAAG-----ACTCTGTATATCCTTCTACCAGACTGGGCTCTGTAGCTATCTTCCAACATCTAACATGAATGAATAAACATGCCTTAGAAATTGAATGCAAATACTTGACACAGGAGGCATGAAATCATATCCAAGAAAAATCCAGGGAGCAAAATCTGCTTAATGGGGTGGGAGGAACAGCCTCTGTCTTTGTCCCTGGAACCTCTCTAGCTTCTTCCACAGTTCCCCAAGGCATTCTATTGACCATGTTCCTTGACAGCAGCAGCCTACCTGTGTGTCAGCCATATTGGCCATGGATCAGTAGAAGAGAATGAAGAGCACAAAGGAATGAACATGGGCTGGGAGGAATGTCTGAGGAGGATGATGAAGGAAAAACTAGAGGAACCCTGGGTGTACTCCACATGTGACAGTAAGTGCCAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
54
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
55 13 chrX 3044956 3044983 chrX 132767880 132767907 - 2133
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
56 TGACATACTTCCTCCATCTAGGCCACAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
57 tgacacacttcctccctcaaggccacac
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
58
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
59 14 chrX 3045356 3046390 chrX 132767908 132769035 - 54561
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
60 CTActccaacaaggccatatctcataaccctaccaaagattctactccctgatgactaagctttcaaatatatgagcctgtgagggacattcttatttaaaccactacaGCTAGAAAAAT-TACAAATGTTTTTATTTGCATTTCCCTGATGGATACAGATTGTTTTAAtaatttcctttttgctcctgtgataaaacactgaccaaaagcagcttggatgaggaaagggtt-----gtttagtttacagattgcagccta--------------------------------------------------------------------------------------------tctttgaggtaagctaaggcaaaaactaaagTTAATTTTT---AAAATATAGTAATTTCATGTAATGATTCATTGATTCAACAAAT----------TACTGGCTATGTTATAGGTcagtagttatcaacctttctaacactgcaactccttttgctataatgacctcaaccataaaattacttttgttgctacttcaaaactgtaattt-gtttctattatgaattataatgtaaatatatgatatgcagggtatctgatatatgaccgtcaaaagagttataacccacaagttgagaagcacAGTTCTCGATGCTTTTTAAGGTACTAGGATGTAACTGAATGAGACACAATGTTGTTGTGCTCAAGATGATTTTTTCTTTGAGTAAAACTGACA--AATGAGCTGGCACTATAgagatggttcagccagtaaagtagttacaggacaatgtaataacgtgagactgagtccccagcatccaaagaaaagtctgggcattgcaacttgcatctgtagtcacagtactggggaggtggagacatgagaaccactagagttttctgaacaaatttgtgaactcgagattcattgatagattctatctggaaaTTGAAGGAAACACCTTAATGACTTCAGGCC---------ATGTGCTTGTATACTCATGTGCTATACACATTTAAATacacgcacacatacatacacacacacacacatacacacacgcac-----------CACATTCTATTAAAAATAATTCACATGATGTCCTACAGTGAAAAATGGAGCAACAGGATCATGGGTTTAAAAAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
61 ctactccagcaagtcc-----tcataatcctatcaaagattctactccctggtgactatgcatttaaatatatgagtccatgagggacattcttatttaaaccaccccaGCTAGAAAAAAACATAAATATTTTTATTTGCATTTCTCTGATGGATGCAGATtgttttaataatttcctttctgctcctgtgaaaaaacactgaccaaaagcagcttggatgaagaaagtatttttttatttagtttacagattaaagcctatctttttttggggggggggactgaacccagggccttgcgcttcctaggcaagcgctctaccactgagctaaatccccaacccctaaagcctatctttgagataagccaaggcaaaaactcaagTTATTCTTTTTGAAAATACAGTAATTTCACATCATCattcattgattcaacacatatttatggaatattggctatgATATAGATcagtggttcttaaccttcctaatgctacaaccctttatgctgtggtaaccacaaccataaaattacttttgtttctacttcataactgtaattttgttactgttatgaattataatataaatatgtgatatgcaggatatctgatgtatgacccctgaaagagttatgacccacaggttgagaaGTAGTGCTCTAGATCCTTTTCAAGAGACTAAGATGTAACTGAATGGGACACAGTGTTGT---ATTCAAGATGATAATTTTTTGGAGTAAAACTGAAAGTAATAAACTgg-actaaagagatagctcagacagtaaagtgcttgcag-------------------------tctccagcatccacagaaaagactgggcattgcaacttgcacctgtagtcacaggactggggatgtgaagacaggaggaccactggagtgtgctgagcaaattggtgagctctagattcattgagcgatcctatctcaaaactgaaggagacaccctaatgacttctggcctctacaaccatgcacttgtatacacaTGTGCTACACACATTTAAATtctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctntAATAAAAA-AATTCA-ATAATATCCTACAGTAAAAAA-----AAACCCATTCATGGGTTTAAAAAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
62
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
63 15 chrX 3046548 3047589 chrX 132769039 132770071 - 59414
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
64 CTTTGAGCAAGTGATGTTTAAGTCAAGACAGGAAAGACATCAACTTGGAAAGGTTGTGAAAAGCATTATAAGTAAGAAATACTTTTACTGCAAAAGTTTTCAAATTCAAAACAAACTTGTTACCTTTGAGAATGTACAGGCAACATTAGTGTGGCTGTCATAAACACTCAAAAAAAAAAAGTAATAACCCAGAGCAGTACTTTA--------------------------------------------AACCTTGCATAGTGGTACATAATTAAAATCCTAGCTCTGGAGAGACTAGGGCAGGAGGGTCATGACTACATAATGGTACACTCTCAAAAAGAAGAAAAACAACCCTCAAAGTAAGAAGCTCTTATAATATG-TTCCCAATTGTTTCTTTGTGAAAATGTAATGCCATTAACATGTTCTGTATCATTTTAGTACATTGTATCTGTATATGTGTTT---GttaatttataaaatattaaattttatCTATGACTAAAAATGAGTGAAAACTGAAAGTTAAAAATTAAAGAGTTGTCATCCAACAAGTATACCTGACATACAGCtttactgcaaattatttatctatgtaaattataacagaaaattgtatgtataaattatcaatttataaaagtatacaatagaaaattagcaatttattattatataaattgtttaaaattcattatttgatattttaatacataaatgaaatatatttagggagaaatttaacttcctagatattatttaagtaagtataacatttaaattttgcttaatgtaagaaaatgcattgctagatactcatataatgtcaatacattttctattcatcacttataaatagtgacaagttataaagcttct-------------gCTTGGTTAAAAGGTAAAAAGCATAAGGCACAAATACATTAAAGATAATGCATGAGACAAGGTGAGGGCAGCCAGTAGACAAACATAAGCTACTTGTTAATGCATGACTTCATGAATGATCACTGAATTGTAAATACTCCAGATGGTATGAAGAGCTCATCAGAGATGACCACTCAGACACCGTGTATCGCTAATTAAATGTGTTTAGTCTAGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
65 TTTTGAACAAGTGATGTTTAATTCAAGACAGGAAAGACATCAACTTTGAAAAGTTATGAAAAGCTCT----GTAAGAAATAATTTTAGTGCAAAAGCTTTCAAACCCAAAACAAACTTGTTACCTTGAAGAATGCACAGAGACCATTAGTATGGCTGTCATACATACTCAAAAGAAAGAA--AATCTCCCAGAGCAGCACTTTACTACTTTTCATCATTGTGTTTTCCCGACTAAAAATACATTTTTTAAACTGGCATAGTGGTACACAATTGAAATCCTAGCTCCTGAGACTCTAGGGCAGGAGGGTCATGGCTACATAATGGTACACTCTCAAAAAGAAAGAA---AACTCTTAAAGTAAGAAGCTTCTAAAATATGTTTTCCAATTGTTTCTTCACGAAAATTTAATATCA-----GTGTTCTGTATCTTTTTAATACA-TGTATCTGCATATGTGTTTATAGTTAATTTATAAAATAGTAAACTTTATCTAGAACTAAGAATGAGTAAAATTTGTAAGTTAAAAATCAAAAAGTTGTTATCTAACAAGTACACTTGACATATGGTATTACTGAAAATTATT----TATGTACATTATAAC--AAAATTATATGTACAAATTATCAATTTATAAAATTATACAATAGAAA----------------------------------------TTTTGGTAACTTCATACATAAACGAAATGTACATAGGGAGACAATTAACTTCCTAGATA----TTTAGTAAATATAACATCTGAATTTTGCTTAATGTAAGAAAATACATTTctagatacacatataatatcaatatatt-----ttcatcacttataaacagtgacaagttataaagctacttaataagatgtaaactacatctaattttaaaaagcataagacacaaggatactaaagataatacatgagacgaggtgagggcagccagtagacatacacgggctacttGTTAATGAATGAATTCATGAATGATCTCTGAATTGTAAATTCTTCTGAtggtatggggagctcatcagagatgagcactcagacacagtgtatagccaataaaaagtctttattctagc
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
66
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
67 16 chrX 3047590 3047634 chrX 14222368 14222417 + 1675
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
68 CTGTTAGGG-----ACCTGGGTATAGCCCCAAGTGTTCAGAATGTGAGAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
69 CTGGAAGGAACTACACCCAAGTACAGCCTTGAGTGTCCAGAACATAGGAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
70
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
71 17 chrX 3047635 3047719 chrX 14222571 14222648 + 3429
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
72 TAGTTAAACCTGGATTGGTCTCAGCAAGACTATAAGATAAAGGAACCTTACACCTTAACACTGTTTTGCCCAGTTACAAAGGTac
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
73 TAGTTTAACCTGCAGTGGCCTCAGCAAGAATACAAGATGGAGGA-------ATTTCTGCATTGCCTTGCCTGCTGACAAAGGGAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
74
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
75 18 chrX 3049058 3049300 chrX 132770073 132770321 - 14281
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
76 ctcctgtaccatgcctgcctggatgctgccatgctcctgcctagatgatagtagactgaacttctgaacctctaagccagcccaaattaaatgttgtccttataaaagatgccttggtcatagtgt----tctcatcagtaaaaccctaa----GACAGAAGTTGGTACCAGATACGGGGGTTATTTGTTTCTTGAGGAATCATGAACTCTGAATACTGTG--------CCCAGGGGCATTCTGAAGATCTCATTAGAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
77 ctcctgcaccatgcctgcctggatactcccatactcccaacttgatgataatggactgaacctttgaacctgtaagccagccccaattaaatgttgtccttataagagttgccttggtcatggtgtctgttcacagcagtaaaatcctaactaagacaGGAC----------ATATGGGTTTTATCTGCTTCTTGGGGAATCATGAACTCTGAACATTGTGCTAATATACCTAGGGCCAttctgaagatcatattagaa
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
78
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
79 19 chrX 3049301 3049850 chr15 879492 880081 - 31160
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
80 GGTTTTGTTAGATATTCTTTCAGATTAAAACATTCCATCCTAGAAGGAGGAAGAGGGTTTATAAAACTCAAGGACTATCACAATTTAA--GACTAATGAAACTCTGGGAA-TTCACAAAAGTCACATGGCCATCCCCAATGTTCTACAAGTAGTGAACAATTGCAGGCAGGAGTG-AGGGGTTTCCTTCAGTGGGGATTCCTGAAAGTTGGTCAGAGAGCTCTAGGGACGTAGTTTTCATTAATCATTATCAACACTGAGTAAGGCTTTCTGGTAATGGAGCTGACATTGAAtcatctgtgttcctttcagtgacctcaataaactcattggttcactaagctaaaatcaggtgCAATGATGTTGGCTTTGTTTCACTC--------------------------------------------AACGTCCTACTTGGAGTAAACATATACTTGTTCATATATTTTCAGGAAAATTTACACAACAGAAGGTAGAAACTTCTAAACAAAAGAATATTTCTCTTTGTTAGTTTAGTCTACTCACTCTATATGGAAAATAAGGATGGAAAAGAACACCACCACCCCCTACAttaatttgggc
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
81 GTTTTTCTTAGGTGTTCCTTCAGATTAAAATATTCCATG-TGGAAGGAGGAAAAAGGTTTATAAATCTCAAGGACTATCTCAATTTAAAAGACTCATGAAACTCTGAAAACTTAACAAAAATCACATAGCCTCCCCCAATATTACATAAGTAGTGAACAATTGTGGGCAGGAGTGAAGGGGTTTCCTTCAGTGTGGGTTTTtgcaagttgggcagagagttctagggaatcaattttcataaatcagcatcagcattggggcaagctttctgttaatggagctgatg-tgagtcatccgtgttcctttcaatgacctcaacaaactcattggttctccaagctaaaatcaggtgctatggtgtagtctttgtttcactctgattaattaattaattaattaattaattaatcaagtaattgttaatgtcctacttg--gtaaacatacgtttatctaactattttcaggaaaattcacacaacaGAAGGTCGAAACTTCTAAACAAAAGAGTATTTCTCTTTGTTAGTTGAGTCTA--CACTCGATAGGGAAA--AATGAAGGAAAAGAAATCCCCCATTAAGTAAACTCACTTAGAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
82
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
83 20 chrX 3055000 3055956 chrX 27929767 27930764 + 46154
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
84 CATCTGTCTAAGATGt---aattatatattttattaataa---ttatattaGCCTAGTTGTTAAACAAG----TTAAGTGTTTCTAATgtgatcctatttaaatataataag-------------cttaactgcataaatgccaaaaatatctccttctctcactcaaggtaaaggcaaaattcacctgtagagtttgtaacctgcagagctttgagctttctgactccactatgacttctagaaaatcacct--cacagttctctgcctccctccatcagttccagccatgcctctatcccagctgcttctcctcatgcatgcaaggtcttctctgacaactgagcctcagcaactgtcatcactttagctggaatgcatatttctcTTGACTGCTGCTGGAGGCCACAGTCTACCTGCATGT-----------------------------------------TTTCATTCCACACCCAAAGGTTCCTTGATAACTTTCCTGGCTATTCTGACTCTCTGAAAAGAATGCTCACCCTGGAATTTCATTTCCTTGAAGCTAGGCCTTGTCATGCTCCCTCTTATCACTTACCAATATGAAAATATTTCATACTGACTTAATAGCTACATGGCTATATGGCTCAtttcccagactaggatgagaactccatgaggataagatctgttcatttgctgcctctggtccttgcagtgtccaaaacactgcactgCAGAGACCACTCACAGTGTTTATGGGACATAGGTAAAACAAATGAACTGAGTGATAATCCATGGGATTGAGCATGTAAAATTACACAGGCATGCCTGGGTCTAGCCATATAGCTACCTACTAATGCACTTCCCACCAGGATCTAGGCTTGCAGGGCACGGTGAAATAGGGCAACTGGAGGCATGGCCAAGAGAAATCTTTCCAAGGTTGAAAT------GACTTTTCCATATACCAGGGTGATTTTATCCTTTTTTTAGAATGTGAGGCCTATTCCAAAGCCATTACATGATATGAACt
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
85 CACCTACTTACAATGTGGAATTTATATATTTGATTTTCATGCTCCAAATT--CCAAGATTTTTGAGAAGATTTTCAGGAGTTGCTGcagtgtgcctgttaaaatatgacaaaaactatgagatgcttcaactttaaaagcactaa---catgtccccctctcactcaaggtaaaagcaaaattcctctgtagaagttttaacctgcagggctttgggctctctgacacccctgtgacttctgagaaatcacttttcacaattttctaccacccttcatcatatccagccatgccttcatcccagctgcttctcctcatgcatgccaggtcttctctggc---------ccagcaattgtcatcacataagctggaatgcacattccccTTGACTGCTGTTGGAtctctctctctctctctctctctctctctctctctctctctctctctctctctctctcCTTGTTCCATTCTAAACCTAGAGCTTCCTTGATACCTTTCCTGACCATTGTAACTCTCTGAAAAGAATGCTGGCCCTGAAATTTCATTTTCTTGAACCTAGACTTGGT-GTGTCCCCTCTTATCACTTACCAATATGAAAATGCTTCAGATAGGCTTATTAGCTACAGGAATATATTGCTCATTTCCCACACTAGGAGGAGAACTCCAAAGGGATACGATCTGTCCATTTGCTGCCTCTGCTGACTGCAGTATATAGAACACTGCATGGC----------CAGAGTGTTTATGTGACAAAGGTAAAACAAATCAATTGGGTGAGAATCTGTGGAATCAAGCATGTAAAGTGAGACAAGTATCCCTGGGTCTAGCCATAATGCTATA----AATGCACTTCCTAACAGGGTATGAGCTTGAAGGGCAGGGTAAAGCAGGGCAACTGGAGGCATGCTCAACAGAAACCTTTCCAAGGTTGAAATGTGATGGCCTCTTCCTTACACCATGGTGCTTGTATCC--TTGTTGGAATGTGGGTCCTGTTCAAATGCCTTTACATGATATGAACT