Mercurial > repos > jjkoehorst > sapp

comparison rnaseq/cutadapt/test-data/gtf_filter_by_attribute_values_list_in2.gtf @ 11:a712b378e090

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cutadapt added
author jjkoehorst <jasperkoehorst@gmail.com>
date Sat, 21 Feb 2015 16:33:42 +0100
parents
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comparison
equal deleted inserted replaced
10:3378d12591ea 11:a712b378e090
1 chr19 Cufflinks exon 22162 22646 . + . gene_id "XLOC_000001"; transcript_id "TCONS_00000001"; exon_number "1"; oId "uc010drl.1"; class_code "."; tss_id "TSS1";
2 chr19 Cufflinks exon 23171 23274 . + . gene_id "XLOC_000001"; transcript_id "TCONS_00000001"; exon_number "2"; oId "uc010drl.1"; class_code "."; tss_id "TSS1";
3 chr19 Cufflinks exon 23585 23703 . + . gene_id "XLOC_000001"; transcript_id "TCONS_00000001"; exon_number "3"; oId "uc010drl.1"; class_code "."; tss_id "TSS1";
4 chr19 Cufflinks exon 58146 58157 . + . gene_id "XLOC_000002"; transcript_id "TCONS_00000002"; exon_number "1"; oId "uc002lob.1"; class_code "."; tss_id "TSS2";
5 chr19 Cufflinks exon 58473 58555 . + . gene_id "XLOC_000002"; transcript_id "TCONS_00000002"; exon_number "2"; oId "uc002lob.1"; class_code "."; tss_id "TSS2";
6 chr19 Cufflinks exon 61625 62417 . + . gene_id "XLOC_000002"; transcript_id "TCONS_00000002"; exon_number "3"; oId "uc002lob.1"; class_code "."; tss_id "TSS2";
7 chr19 Cufflinks exon 61679 62596 . + . gene_id "XLOC_000002"; transcript_id "TCONS_00000003"; exon_number "1"; oId "uc002loc.1"; class_code ".";
8 chr19 Cufflinks exon 447490 447551 . + . gene_id "XLOC_000003"; transcript_id "TCONS_00000006"; exon_number "1"; oId "uc010drq.1"; class_code "."; tss_id "TSS3";
9 chr19 Cufflinks exon 449496 449825 . + . gene_id "XLOC_000003"; transcript_id "TCONS_00000006"; exon_number "2"; oId "uc010drq.1"; class_code "."; tss_id "TSS3";
10 chr19 Cufflinks exon 455745 456343 . + . gene_id "XLOC_000003"; transcript_id "TCONS_00000006"; exon_number "3"; oId "uc010drq.1"; class_code "."; tss_id "TSS3";
11 chr19 Cufflinks exon 447490 447551 . + . gene_id "XLOC_000003"; transcript_id "TCONS_00000005"; exon_number "1"; oId "uc002lot.1"; class_code "."; tss_id "TSS3";
12 chr19 Cufflinks exon 448833 449117 . + . gene_id "XLOC_000003"; transcript_id "TCONS_00000005"; exon_number "2"; oId "uc002lot.1"; class_code "."; tss_id "TSS3";
13 chr19 Cufflinks exon 449496 449825 . + . gene_id "XLOC_000003"; transcript_id "TCONS_00000005"; exon_number "3"; oId "uc002lot.1"; class_code "."; tss_id "TSS3";
14 chr19 Cufflinks exon 455745 456343 . + . gene_id "XLOC_000003"; transcript_id "TCONS_00000005"; exon_number "4"; oId "uc002lot.1"; class_code "."; tss_id "TSS3";
15 chr19 Cufflinks exon 447490 447551 . + . gene_id "XLOC_000003"; transcript_id "TCONS_00000004"; exon_number "1"; oId "uc002los.1"; class_code "."; tss_id "TSS3";
16 chr19 Cufflinks exon 448833 449117 . + . gene_id "XLOC_000003"; transcript_id "TCONS_00000004"; exon_number "2"; oId "uc002los.1"; class_code "."; tss_id "TSS3";
17 chr19 Cufflinks exon 449496 449825 . + . gene_id "XLOC_000003"; transcript_id "TCONS_00000004"; exon_number "3"; oId "uc002los.1"; class_code "."; tss_id "TSS3";
18 chr19 Cufflinks exon 452669 452929 . + . gene_id "XLOC_000003"; transcript_id "TCONS_00000004"; exon_number "4"; oId "uc002los.1"; class_code "."; tss_id "TSS3";
19 chr19 Cufflinks exon 455745 456343 . + . gene_id "XLOC_000003"; transcript_id "TCONS_00000004"; exon_number "5"; oId "uc002los.1"; class_code "."; tss_id "TSS3";
20 chr19 Cufflinks exon 458497 458844 . + . gene_id "XLOC_000004"; transcript_id "TCONS_00000007"; exon_number "1"; oId "uc002lou.1"; class_code "."; tss_id "TSS4";
21 chr19 Cufflinks exon 469889 470654 . + . gene_id "XLOC_000004"; transcript_id "TCONS_00000007"; exon_number "2"; oId "uc002lou.1"; class_code "."; tss_id "TSS4";
22 chr19 Cufflinks exon 482733 483108 . + . gene_id "XLOC_000005"; transcript_id "TCONS_00000008"; exon_number "1"; oId "uc002lov.1"; class_code "."; tss_id "TSS5";
23 chr19 Cufflinks exon 486837 486923 . + . gene_id "XLOC_000005"; transcript_id "TCONS_00000008"; exon_number "2"; oId "uc002lov.1"; class_code "."; tss_id "TSS5";
24 chr19 Cufflinks exon 487243 487340 . + . gene_id "XLOC_000005"; transcript_id "TCONS_00000008"; exon_number "3"; oId "uc002lov.1"; class_code "."; tss_id "TSS5";
25 chr19 Cufflinks exon 488013 488147 . + . gene_id "XLOC_000005"; transcript_id "TCONS_00000008"; exon_number "4"; oId "uc002lov.1"; class_code "."; tss_id "TSS5";
26 chr19 Cufflinks exon 492339 493087 . + . gene_id "XLOC_000005"; transcript_id "TCONS_00000008"; exon_number "5"; oId "uc002lov.1"; class_code "."; tss_id "TSS5";
27 chr19 Cufflinks exon 495027 495126 . + . gene_id "XLOC_000006"; transcript_id "TCONS_00000009"; exon_number "1"; oId "uc002low.1"; class_code "."; tss_id "TSS6";
28 chr19 Cufflinks exon 498280 498436 . + . gene_id "XLOC_000006"; transcript_id "TCONS_00000009"; exon_number "2"; oId "uc002low.1"; class_code "."; tss_id "TSS6";
29 chr19 Cufflinks exon 499542 499677 . + . gene_id "XLOC_000006"; transcript_id "TCONS_00000009"; exon_number "3"; oId "uc002low.1"; class_code "."; tss_id "TSS6";
30 chr19 Cufflinks exon 499922 500185 . + . gene_id "XLOC_000006"; transcript_id "TCONS_00000009"; exon_number "4"; oId "uc002low.1"; class_code "."; tss_id "TSS6";
31 chr19 Cufflinks exon 500630 500919 . + . gene_id "XLOC_000006"; transcript_id "TCONS_00000009"; exon_number "5"; oId "uc002low.1"; class_code "."; tss_id "TSS6";
32 chr19 Cufflinks exon 522325 522579 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000010"; exon_number "1"; oId "uc002loy.1"; class_code "."; tss_id "TSS7";
33 chr19 Cufflinks exon 531379 531461 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000010"; exon_number "2"; oId "uc002loy.1"; class_code "."; tss_id "TSS7";
34 chr19 Cufflinks exon 531646 531782 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000010"; exon_number "3"; oId "uc002loy.1"; class_code "."; tss_id "TSS7";
35 chr19 Cufflinks exon 532315 532591 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000010"; exon_number "4"; oId "uc002loy.1"; class_code "."; tss_id "TSS7";
36 chr19 Cufflinks exon 533306 533330 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000010"; exon_number "5"; oId "uc002loy.1"; class_code "."; tss_id "TSS7";
37 chr19 Cufflinks exon 533514 533582 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000010"; exon_number "6"; oId "uc002loy.1"; class_code "."; tss_id "TSS7";
38 chr19 Cufflinks exon 533750 534493 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000010"; exon_number "7"; oId "uc002loy.1"; class_code "."; tss_id "TSS7";
39 chr19 Cufflinks exon 523537 523701 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000014"; exon_number "1"; oId "uc010drr.1"; class_code "."; tss_id "TSS8";
40 chr19 Cufflinks exon 530500 530656 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000014"; exon_number "2"; oId "uc010drr.1"; class_code "."; tss_id "TSS8";
41 chr19 Cufflinks exon 531379 531461 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000014"; exon_number "3"; oId "uc010drr.1"; class_code "."; tss_id "TSS8";
42 chr19 Cufflinks exon 531646 531782 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000014"; exon_number "4"; oId "uc010drr.1"; class_code "."; tss_id "TSS8";
43 chr19 Cufflinks exon 532315 532581 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000014"; exon_number "5"; oId "uc010drr.1"; class_code "."; tss_id "TSS8";
44 chr19 Cufflinks exon 533750 534493 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000014"; exon_number "6"; oId "uc010drr.1"; class_code "."; tss_id "TSS8";
45 chr19 Cufflinks exon 523537 523701 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000013"; exon_number "1"; oId "uc002lpb.1"; class_code "."; tss_id "TSS8";
46 chr19 Cufflinks exon 530500 530656 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000013"; exon_number "2"; oId "uc002lpb.1"; class_code "."; tss_id "TSS8";
47 chr19 Cufflinks exon 531379 531461 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000013"; exon_number "3"; oId "uc002lpb.1"; class_code "."; tss_id "TSS8";
48 chr19 Cufflinks exon 531646 531782 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000013"; exon_number "4"; oId "uc002lpb.1"; class_code "."; tss_id "TSS8";
49 chr19 Cufflinks exon 532315 532581 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000013"; exon_number "5"; oId "uc002lpb.1"; class_code "."; tss_id "TSS8";
50 chr19 Cufflinks exon 533306 533330 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000013"; exon_number "6"; oId "uc002lpb.1"; class_code "."; tss_id "TSS8";
51 chr19 Cufflinks exon 533514 533582 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000013"; exon_number "7"; oId "uc002lpb.1"; class_code "."; tss_id "TSS8";
52 chr19 Cufflinks exon 533750 534493 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000013"; exon_number "8"; oId "uc002lpb.1"; class_code "."; tss_id "TSS8";
53 chr19 Cufflinks exon 523537 523701 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000012"; exon_number "1"; oId "uc002lpa.1"; class_code "."; tss_id "TSS8";
54 chr19 Cufflinks exon 530500 530656 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000012"; exon_number "2"; oId "uc002lpa.1"; class_code "."; tss_id "TSS8";
55 chr19 Cufflinks exon 531379 531461 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000012"; exon_number "3"; oId "uc002lpa.1"; class_code "."; tss_id "TSS8";
56 chr19 Cufflinks exon 531646 531782 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000012"; exon_number "4"; oId "uc002lpa.1"; class_code "."; tss_id "TSS8";
57 chr19 Cufflinks exon 532315 532591 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000012"; exon_number "5"; oId "uc002lpa.1"; class_code "."; tss_id "TSS8";
58 chr19 Cufflinks exon 533306 533330 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000012"; exon_number "6"; oId "uc002lpa.1"; class_code "."; tss_id "TSS8";
59 chr19 Cufflinks exon 533514 533582 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000012"; exon_number "7"; oId "uc002lpa.1"; class_code "."; tss_id "TSS8";
60 chr19 Cufflinks exon 533750 534493 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000012"; exon_number "8"; oId "uc002lpa.1"; class_code "."; tss_id "TSS8";
61 chr19 Cufflinks exon 523537 523701 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000011"; exon_number "1"; oId "uc002loz.1"; class_code "."; tss_id "TSS8";
62 chr19 Cufflinks exon 528774 529121 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000011"; exon_number "2"; oId "uc002loz.1"; class_code "."; tss_id "TSS8";
63 chr19 Cufflinks exon 530500 530656 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000011"; exon_number "3"; oId "uc002loz.1"; class_code "."; tss_id "TSS8";
64 chr19 Cufflinks exon 531379 531461 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000011"; exon_number "4"; oId "uc002loz.1"; class_code "."; tss_id "TSS8";
65 chr19 Cufflinks exon 531646 531782 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000011"; exon_number "5"; oId "uc002loz.1"; class_code "."; tss_id "TSS8";
66 chr19 Cufflinks exon 532315 532591 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000011"; exon_number "6"; oId "uc002loz.1"; class_code "."; tss_id "TSS8";
67 chr19 Cufflinks exon 533306 533330 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000011"; exon_number "7"; oId "uc002loz.1"; class_code "."; tss_id "TSS8";
68 chr19 Cufflinks exon 533514 533582 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000011"; exon_number "8"; oId "uc002loz.1"; class_code "."; tss_id "TSS8";
69 chr19 Cufflinks exon 533750 534493 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000011"; exon_number "9"; oId "uc002loz.1"; class_code "."; tss_id "TSS8";
70 chr19 Cufflinks exon 529850 530656 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000015"; exon_number "1"; oId "uc002lpc.1"; class_code "."; tss_id "TSS9";
71 chr19 Cufflinks exon 531379 531461 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000015"; exon_number "2"; oId "uc002lpc.1"; class_code "."; tss_id "TSS9";
72 chr19 Cufflinks exon 531646 531782 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000015"; exon_number "3"; oId "uc002lpc.1"; class_code "."; tss_id "TSS9";
73 chr19 Cufflinks exon 532315 532591 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000015"; exon_number "4"; oId "uc002lpc.1"; class_code "."; tss_id "TSS9";
74 chr19 Cufflinks exon 533306 533330 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000015"; exon_number "5"; oId "uc002lpc.1"; class_code "."; tss_id "TSS9";
75 chr19 Cufflinks exon 533514 533582 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000015"; exon_number "6"; oId "uc002lpc.1"; class_code "."; tss_id "TSS9";
76 chr19 Cufflinks exon 533750 534493 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000015"; exon_number "7"; oId "uc002lpc.1"; class_code "."; tss_id "TSS9";
77 chr19 Cufflinks exon 533496 533582 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000016"; exon_number "1"; oId "uc002lpd.1"; class_code "."; tss_id "TSS10";
78 chr19 Cufflinks exon 533750 534493 . + . gene_id "XLOC_000007"; transcript_id "TCONS_00000016"; exon_number "2"; oId "uc002lpd.1"; class_code "."; tss_id "TSS10";
79 chr19 Cufflinks exon 540893 541577 . + . gene_id "XLOC_000008"; transcript_id "TCONS_00000017"; exon_number "1"; oId "uc002lpe.1"; class_code "."; tss_id "TSS11";
80 chr19 Cufflinks exon 554544 554967 . + . gene_id "XLOC_000008"; transcript_id "TCONS_00000017"; exon_number "2"; oId "uc002lpe.1"; class_code "."; tss_id "TSS11";
81 chr19 Cufflinks exon 556061 556222 . + . gene_id "XLOC_000008"; transcript_id "TCONS_00000017"; exon_number "3"; oId "uc002lpe.1"; class_code "."; tss_id "TSS11";
82 chr19 Cufflinks exon 558964 559182 . + . gene_id "XLOC_000008"; transcript_id "TCONS_00000017"; exon_number "4"; oId "uc002lpe.1"; class_code "."; tss_id "TSS11";
83 chr19 Cufflinks exon 561259 561405 . + . gene_id "XLOC_000008"; transcript_id "TCONS_00000017"; exon_number "5"; oId "uc002lpe.1"; class_code "."; tss_id "TSS11";
84 chr19 Cufflinks exon 564248 564488 . + . gene_id "XLOC_000008"; transcript_id "TCONS_00000017"; exon_number "6"; oId "uc002lpe.1"; class_code "."; tss_id "TSS11";
85 chr19 Cufflinks exon 564852 565016 . + . gene_id "XLOC_000008"; transcript_id "TCONS_00000017"; exon_number "7"; oId "uc002lpe.1"; class_code "."; tss_id "TSS11";
86 chr19 Cufflinks exon 566795 568159 . + . gene_id "XLOC_000008"; transcript_id "TCONS_00000017"; exon_number "8"; oId "uc002lpe.1"; class_code "."; tss_id "TSS11";
87 chr19 Cufflinks exon 590926 591139 . + . gene_id "XLOC_000009"; transcript_id "TCONS_00000018"; exon_number "1"; oId "uc002lpg.1"; class_code "."; tss_id "TSS12";
88 chr19 Cufflinks exon 594235 594338 . + . gene_id "XLOC_000009"; transcript_id "TCONS_00000018"; exon_number "2"; oId "uc002lpg.1"; class_code "."; tss_id "TSS12";
89 chr19 Cufflinks exon 594410 594604 . + . gene_id "XLOC_000009"; transcript_id "TCONS_00000018"; exon_number "3"; oId "uc002lpg.1"; class_code "."; tss_id "TSS12";
90 chr19 Cufflinks exon 627389 627526 . + . gene_id "XLOC_000010"; transcript_id "TCONS_00000019"; exon_number "1"; oId "uc002lpk.1"; class_code "."; tss_id "TSS13";
91 chr19 Cufflinks exon 628792 628977 . + . gene_id "XLOC_000010"; transcript_id "TCONS_00000019"; exon_number "2"; oId "uc002lpk.1"; class_code "."; tss_id "TSS13";
92 chr19 Cufflinks exon 631274 631489 . + . gene_id "XLOC_000010"; transcript_id "TCONS_00000019"; exon_number "3"; oId "uc002lpk.1"; class_code "."; tss_id "TSS13";
93 chr19 Cufflinks exon 632333 632560 . + . gene_id "XLOC_000010"; transcript_id "TCONS_00000019"; exon_number "4"; oId "uc002lpk.1"; class_code "."; tss_id "TSS13";
94 chr19 Cufflinks exon 632650 634392 . + . gene_id "XLOC_000010"; transcript_id "TCONS_00000019"; exon_number "5"; oId "uc002lpk.1"; class_code "."; tss_id "TSS13";
95 chr19 Cufflinks exon 631715 631879 . + . gene_id "XLOC_000010"; transcript_id "TCONS_00000020"; exon_number "1"; oId "uc010drt.1"; class_code "."; tss_id "TSS14";
96 chr19 Cufflinks exon 632333 632560 . + . gene_id "XLOC_000010"; transcript_id "TCONS_00000020"; exon_number "2"; oId "uc010drt.1"; class_code "."; tss_id "TSS14";
97 chr19 Cufflinks exon 632650 634392 . + . gene_id "XLOC_000010"; transcript_id "TCONS_00000020"; exon_number "3"; oId "uc010drt.1"; class_code "."; tss_id "TSS14";
98 chr19 Cufflinks exon 659953 660151 . + . gene_id "XLOC_000011"; transcript_id "TCONS_00000022"; exon_number "1"; oId "uc002lpn.1"; class_code "."; tss_id "TSS15";
99 chr19 Cufflinks exon 677138 677189 . + . gene_id "XLOC_000011"; transcript_id "TCONS_00000022"; exon_number "2"; oId "uc002lpn.1"; class_code "."; tss_id "TSS15";
100 chr19 Cufflinks exon 678008 678088 . + . gene_id "XLOC_000011"; transcript_id "TCONS_00000022"; exon_number "3"; oId "uc002lpn.1"; class_code "."; tss_id "TSS15";