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comparison rnaseq/cutadapt/test-data/s2fq_paired_R3_QV.qualsolid @ 11:a712b378e090

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cutadapt added
author jjkoehorst <jasperkoehorst@gmail.com>
date Sat, 21 Feb 2015 16:33:42 +0100
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10:3378d12591ea 11:a712b378e090
1 # Mon Jan 19 06:35:55 2009 /share/apps/corona/bin/filter_fasta.pl --output=/data/results/0176/0176_20090114_1/skmusc_cov_25/results.01/primary.20090119120505312 --name=0176_20090114_1_skmusc_cov_25_ --tag=R3 --minlength=25 --mask=1111111111111111111111111 --prefix=G /data/results/0176/0176_20090114_1/skmusc_cov_25/jobs/postPrimerSetPrimary.1512/rawseq
2 # Cwd: /home/pipeline
3 # Title: 0176_20090114_1_skmusc_cov_25_
4 >1378_11_329_R3
5 2 2 2 2 3 3 2 3 2 3 5 2 2 2 2 2 3 6 3 2 3 2 2 2 3
6 >1378_17_1788_R3
7 2 2 3 2 3 2 2 2 3 2 3 2 2 2 2 2 2 2 3 2 3 2 2 2 2
8 >1378_25_2035_R3
9 2 2 2 2 2 2 2 4 2 3 4 2 3 3 2 2 2 7 3 2 2 2 5 5 4
10 >1378_28_770_R3
11 2 2 2 2 3 2 2 4 4 3 2 2 2 2 4 2 4 3 2 4 4 2 7 3 3
12 >1378_33_1945_R3
13 26 13 21 26 30 26 20 20 21 24 22 29 23 22 22 24 19 20 22 24 23 21 17 21 19
14 >1378_34_789_R3
15 3 2 2 2 4 3 4 3 4 4 2 2 2 3 2 2 2 2 3 2 2 2 3 2 5
16 >1378_35_263_R3
17 7 3 4 4 5 11 8 18 14 8 4 3 12 21 6 3 5 20 5 2 3 6 6 20 13
18 >1378_43_186_R3
19 2 3 4 2 3 2 2 2 2 2 2 2 2 4 2 2 4 2 3 2 2 2 6 2 6
20 >1378_51_1671_R3
21 2 2 2 4 3 3 2 2 2 2 3 2 2 2 2 2 2 2 2 3 2 2 15 2 2
22 >1378_56_324_R3
23 2 2 3 2 2 2 2 2 3 3 3 2 3 3 3 3 2 2 4 2 2 2 9 7 2
24 >1378_56_773_R3
25 4 2 2 4 4 2 5 3 2 2 2 3 2 3 2 2 4 3 2 2 2 2 4 4 3
26 >1378_62_2027_R3
27 10 9 2 2 8 11 14 4 2 2 3 8 2 4 2 2 16 3 2 6 4 13 2 5 2
28 >1378_62_2029_R3
29 8 14 3 3 3 28 7 2 2 2 2 4 2 2 2 2 8 3 3 4 3 12 5 4 2
30 >1378_67_1795_R3
31 33 31 31 13 30 22 31 31 31 13 31 25 31 32 27 27 29 29 28 29 22 15 27 31 22
32 >1378_68_466_R3
33 12 14 2 2 3 15 24 2 3 2 13 28 3 2 3 22 21 10 3 4 16 6 2 2 2
34 >1378_68_1692_R3
35 4 2 2 2 4 4 3 4 4 2 2 4 3 2 3 2 2 3 2 2 2 3 3 2 3
36 >1378_80_664_R3
37 4 4 2 2 4 11 4 3 3 2 5 3 3 2 2 2 3 2 3 4 2 2 6 4 2
38 >1378_85_1786_R3
39 5 11 6 5 14 4 14 31 11 5 16 11 5 6 14 8 5 11 21 5 5 16 8 7 7
40 >1378_86_1011_R3
41 11 25 3 2 2 2 8 4 2 2 3 24 3 2 2 2 16 3 3 2 3 17 2 2 2
42 >1378_86_1789_R3
43 19 16 13 20 16 14 5 4 2 6 3 11 9 30 4 2 21 5 15 3 3 20 11 17 15
44 >1378_91_1596_R3
45 11 6 29 4 14 18 4 28 7 8 23 6 2 13 4 30 20 15 3 5 20 29 4 8 4
46 >1378_94_1595_R3
47 18 11 23 31 21 6 29 23 27 22 21 29 31 31 7 12 29 24 8 22 6 9 24 19 16
48 >1378_95_1039_R3
49 6 5 2 2 11 13 14 2 3 5 8 21 2 2 10 11 6 2 3 3 15 7 2 2 3
50 >1378_95_1767_R3
51 8 6 11 11 17 6 7 16 15 14 29 25 28 14 22 8 13 18 5 4 21 5 8 5 21
52 >1378_96_1037_R3
53 13 6 3 2 10 2 7 2 2 12 4 20 2 2 10 9 5 2 2 2 12 13 3 3 3
54 >1378_96_1764_R3
55 13 19 28 6 17 23 29 13 31 19 23 23 16 33 23 15 22 25 23 17 17 29 4 8 16
56 >1378_98_1574_R3
57 3 10 4 4 3 2 8 2 2 4 2 2 3 2 2 2 2 4 2 2 2 3 4 3 2
58 >1378_107_1647_R3
59 3 2 2 2 6 3 3 2 3 3 3 7 2 4 2 2 2 7 2 3 2 2 3 4 2
60 >1378_111_829_R3
61 3 3 2 2 6 5 2 2 2 3 2 2 8 2 4 7 3 2 3 4 2 3 6 4 2
62 >1378_111_1900_R3
63 6 8 3 8 6 2 4 3 2 2 2 2 2 2 2 2 3 6 2 5 4 3 2 7 2
64 >1378_112_1483_R3
65 2 2 3 2 8 2 2 2 2 2 2 2 2 2 2 2 2 2 3 2 4 2 4 6 4
66 >1378_125_1287_R3
67 2 2 2 3 4 4 2 3 2 2 2 3 2 2 3 3 2 5 4 2 2 3 7 4 4
68 >1378_126_468_R3
69 30 31 31 33 31 31 31 29 31 17 29 16 10 30 25 24 17 8 29 31 23 5 5 27 10
70 >1378_127_664_R3
71 2 2 4 3 4 2 5 2 2 3 4 2 4 4 2 2 2 3 3 2 2 2 8 12 6
72 >1378_129_463_R3
73 13 11 8 5 17 15 4 23 6 7 5 18 20 12 9 9 9 16 12 17 5 10 20 16 15
74 >1378_129_875_R3
75 4 2 2 2 8 2 2 2 10 2 2 2 3 2 2 3 2 5 4 2 2 3 11 2 3
76 >1378_140_1251_R3
77 2 2 4 2 4 3 2 2 3 3 3 2 2 2 2 2 2 13 3 3 3 4 2 4 7
78 >1378_141_809_R3
79 2 2 2 4 8 2 2 3 3 2 2 2 2 2 4 3 2 3 2 4 4 2 6 2 2
80 >1378_144_983_R3
81 4 2 7 2 4 2 2 2 2 2 7 3 2 4 2 2 3 3 2 4 2 2 4 2 8
82 >1378_153_270_R3
83 4 4 3 2 2 7 3 2 2 2 2 2 2 5 2 2 3 5 3 3 3 3 4 2 2
84 >1378_155_1689_R3
85 31 31 19 31 31 28 21 28 31 31 27 19 25 31 31 21 23 16 31 31 31 13 17 19 13
86 >1378_157_1580_R3
87 2 2 4 3 5 4 2 3 3 6 4 3 4 2 3 2 2 9 2 4 3 3 3 3 2
88 >1378_161_317_R3
89 8 13 5 4 6 11 6 7 31 6 6 30 22 14 14 10 5 8 10 17 13 10 8 15 8
90 >1378_177_735_R3
91 31 31 31 33 29 31 32 34 24 31 32 27 33 23 31 28 24 29 22 31 20 8 29 11 15
92 >1378_181_1684_R3
93 2 3 2 2 6 3 4 6 2 2 4 2 2 3 4 3 2 3 3 2 2 2 2 3 9
94 >1378_187_1407_R3
95 2 2 2 2 2 5 2 2 3 3 2 2 2 3 2 2 2 2 2 4 2 2 4 4 8
96 >1378_203_721_R3
97 24 24 27 5 13 14 16 5 31 26 16 17 6 8 30 27 16 6 11 30 14 8 5 14 13
98 >1378_206_2039_R3
99 31 30 28 29 29 30 28 25 26 27 29 29 19 25 25 27 28 20 21 16 24 24 7 15 20