Mercurial > repos > jjkoehorst > sapp

diff sappDocker/genomeInformation.xml @ 31:957156367442 draft

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author jjkoehorst
date Wed, 29 Jun 2016 01:36:58 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/sappDocker/genomeInformation.xml	Wed Jun 29 01:36:58 2016 -0400
@@ -0,0 +1,16 @@
+<tool id="DInfo" name="Information overview" version="1.0.0">
+  <description>Information overview</description>
+  <requirements>
+    <container type="docker">jjkoehorst/sappdocker:GENOMEINFORMATION</container>
+  </requirements>
+  <command interpreter="docker">java -jar /genomeinformation/target/GenomeInformation-0.0.1-SNAPSHOT-jar-with-dependencies.jar -input $input -output '$output' -format 'TURTLE' 
+    </command>
+  <inputs>
+    <param format="ttl" label="Genome Database with Interpro" multiple="True" name="input" type="data"/>
+  </inputs>
+  <outputs>
+    <data format="text" label="information.text" name="output"/>
+  </outputs>
+  <help>Genome(s) information overview
+  </help>
+</tool>
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