--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/rnaseq/cutadapt/test-data/gtf2bedgraph_in.gtf	Sat Feb 21 16:33:42 2015 +0100
@@ -0,0 +1,100 @@
+chr1	Cufflinks	exon	36425950	36426026	1000	-	.	gene_id "uc007aqa.1"; transcript_id "uc007aqa.1"; exon_number "21"; FPKM "4.8386844109"; frac "0.515875"; conf_lo "0.000000"; conf_hi "9.779040"; cov "0.274837";
+chr1	Cufflinks	exon	46891972	46892996	1000	-	.	gene_id "uc007axc.1"; transcript_id "uc007axc.1"; exon_number "9"; FPKM "8.4688567539"; frac "1.000000"; conf_lo "6.667227"; conf_hi "10.270487"; cov "0.481031";
+chr1	Cufflinks	exon	71654478	71654594	1000	-	.	gene_id "uc007bkb.1"; transcript_id "uc007bkb.1"; exon_number "4"; FPKM "0.4686878995"; frac "0.186704"; conf_lo "0.300747"; conf_hi "0.636629"; cov "0.026621";
+chr1	Cufflinks	transcript	72629845	72679706	1000	+	.	gene_id "uc007bks.1"; transcript_id "uc007bks.1"; FPKM "4.0695297327"; frac "1.000000"; conf_lo "2.473329"; conf_hi "5.665731"; cov "0.231149";
+chr1	Cufflinks	exon	75531753	75532000	1000	+	.	gene_id "uc007bpt.1"; transcript_id "uc007bpt.1"; exon_number "24"; FPKM "3.6392661141"; frac "1.000000"; conf_lo "2.391008"; conf_hi "4.887524"; cov "0.206710";
+chr1	Cufflinks	exon	123389482	123389564	1000	+	.	gene_id "uc007cju.1"; transcript_id "uc007cju.1"; exon_number "20"; FPKM "0.9948773061"; frac "1.000000"; conf_lo "0.105032"; conf_hi "1.884723"; cov "0.056509";
+chr1	Cufflinks	exon	129625990	129626119	1000	+	.	gene_id "uc007ckv.1"; transcript_id "uc007ckv.1"; exon_number "1"; FPKM "0.0003267777"; frac "0.004692"; conf_lo "0.000000"; conf_hi "0.000915"; cov "0.000019";
+chr1	Cufflinks	exon	132059397	132059512	1000	+	.	gene_id "uc007clw.1"; transcript_id "uc007clw.1"; exon_number "7"; FPKM "0.2051423010"; frac "0.886787"; conf_lo "0.000000"; conf_hi "0.509199"; cov "0.011652";
+chr1	Cufflinks	exon	175865141	175865308	1000	-	.	gene_id "uc007dsf.1"; transcript_id "uc007dsf.1"; exon_number "5"; FPKM "0.6544444010"; frac "1.000000"; conf_lo "0.068952"; conf_hi "1.239936"; cov "0.037172";
+chr10	Cufflinks	transcript	7399380	7400956	1000	-	.	gene_id "uc007eie.1"; transcript_id "uc007eie.1"; FPKM "2.1099978681"; frac "1.000000"; conf_lo "0.514989"; conf_hi "3.705006"; cov "0.119848";
+chr10	Cufflinks	exon	79784826	79784954	1000	-	.	gene_id "uc007gcr.1"; transcript_id "uc007gcr.1"; exon_number "2"; FPKM "1.2054582676"; frac "1.000000"; conf_lo "0.000000"; conf_hi "2.597402"; cov "0.068470";
+chr10	Cufflinks	exon	79820729	79820836	1000	+	.	gene_id "uc007gcy.1"; transcript_id "uc007gcy.1"; exon_number "2"; FPKM "1.8177911161"; frac "1.000000"; conf_lo "0.532419"; conf_hi "3.103164"; cov "0.103250";
+chr10	Cufflinks	transcript	105907395	106369573	1000	+	.	gene_id "uc007gyr.1"; transcript_id "uc007gyr.1"; FPKM "4.2493607936"; frac "0.247216"; conf_lo "3.727223"; conf_hi "4.771499"; cov "0.241364";
+chr10	Cufflinks	exon	119487061	119487172	1000	+	.	gene_id "uc007hep.1"; transcript_id "uc007hep.1"; exon_number "10"; FPKM "4.3105966126"; frac "0.341843"; conf_lo "3.127417"; conf_hi "5.493776"; cov "0.244842";
+chr11	Cufflinks	exon	29097093	29097209	1000	+	.	gene_id "uc007igs.1"; transcript_id "uc007igs.1"; exon_number "7"; FPKM "4.2530782301"; frac "1.000000"; conf_lo "2.700074"; conf_hi "5.806083"; cov "0.241575";
+chr11	Cufflinks	exon	69404158	69404264	1000	+	.	gene_id "uc007jqm.1"; transcript_id "uc007jqm.1"; exon_number "10"; FPKM "18.7450971965"; frac "0.685277"; conf_lo "11.773851"; conf_hi "25.716343"; cov "1.064721";
+chr11	Cufflinks	transcript	98249986	98261804	1000	-	.	gene_id "uc007lgh.1"; transcript_id "uc007lgh.1"; FPKM "2.1571271227"; frac "1.000000"; conf_lo "0.856331"; conf_hi "3.457924"; cov "0.122525";
+chr11	Cufflinks	exon	102210141	102211681	1000	-	.	gene_id "uc007lrp.1"; transcript_id "uc007lrp.1"; exon_number "1"; FPKM "0.8688186006"; frac "1.000000"; conf_lo "0.254471"; conf_hi "1.483166"; cov "0.049349";
+chr11	Cufflinks	transcript	105926400	105927243	1000	-	.	gene_id "uc007lya.1"; transcript_id "uc007lya.1"; FPKM "3.6706747247"; frac "1.000000"; conf_lo "0.000000"; conf_hi "8.861793"; cov "0.208494";
+chr11	Cufflinks	exon	106633966	106634066	1000	-	.	gene_id "uc007lzm.1"; transcript_id "uc007lzm.1"; exon_number "2"; FPKM "2.4729108195"; frac "0.689555"; conf_lo "0.805433"; conf_hi "4.140389"; cov "0.140461";
+chr11	Cufflinks	exon	120472427	120472492	1000	-	.	gene_id "uc007mtq.1"; transcript_id "uc007mtq.1"; exon_number "3"; FPKM "10.2380258574"; frac "0.356865"; conf_lo "4.499395"; conf_hi "15.976656"; cov "0.581520";
+chr12	Cufflinks	exon	100112717	100112852	1000	-	.	gene_id "uc007orn.1"; transcript_id "uc007orn.1"; exon_number "39"; FPKM "1.8669402513"; frac "0.154118"; conf_lo "1.707295"; conf_hi "2.026586"; cov "0.106042";
+chr13	Cufflinks	exon	8889564	8891614	1000	+	.	gene_id "uc007pkn.1"; transcript_id "uc007pkn.1"; exon_number "5"; FPKM "9.4402522582"; frac "1.000000"; conf_lo "6.745038"; conf_hi "12.135466"; cov "0.536206";
+chr13	Cufflinks	exon	13756207	13756380	1000	+	.	gene_id "uc007pmj.1"; transcript_id "uc007pmj.1"; exon_number "18"; FPKM "0.0574771218"; frac "0.793101"; conf_lo "0.000000"; conf_hi "0.140705"; cov "0.003265";
+chr13	Cufflinks	exon	93243918	93244083	1000	-	.	gene_id "uc007rkp.1"; transcript_id "uc007rkp.1"; exon_number "4"; FPKM "6.9802111138"; frac "1.000000"; conf_lo "3.858566"; conf_hi "10.101856"; cov "0.396476";
+chr14	Cufflinks	exon	13130096	13130170	1000	+	.	gene_id "uc007sfq.1"; transcript_id "uc007sfq.1"; exon_number "4"; FPKM "4.0381928600"; frac "1.000000"; conf_lo "2.254366"; conf_hi "5.822020"; cov "0.229369";
+chr14	Cufflinks	exon	32036106	32036250	1000	+	.	gene_id "uc007sxe.1"; transcript_id "uc007sxe.1"; exon_number "10"; FPKM "0.1289615781"; frac "1.000000"; conf_lo "0.000000"; conf_hi "0.386885"; cov "0.007325";
+chr14	Cufflinks	exon	56517080	56517223	1000	-	.	gene_id "uc007ubd.1"; transcript_id "uc007ubd.1"; exon_number "2"; FPKM "15.7683764379"; frac "0.548796"; conf_lo "8.949920"; conf_hi "22.586833"; cov "0.895643";
+chr14	Cufflinks	exon	62950942	62951013	1000	+	.	gene_id "uc007ugl.1"; transcript_id "uc007ugl.1"; exon_number "1"; FPKM "10.1138803585"; frac "1.000000"; conf_lo "6.480867"; conf_hi "13.746893"; cov "0.574468";
+chr14	Cufflinks	exon	66479007	66479052	1000	+	.	gene_id "uc007ujq.1"; transcript_id "uc007ujq.1"; exon_number "8"; FPKM "14.3011267395"; frac "1.000000"; conf_lo "10.806805"; conf_hi "17.795448"; cov "0.812304";
+chr14	Cufflinks	exon	70961619	70961783	1000	+	.	gene_id "uc007uoj.1"; transcript_id "uc007uoj.1"; exon_number "7"; FPKM "2.0814553995"; frac "1.000000"; conf_lo "1.231705"; conf_hi "2.931206"; cov "0.118227";
+chr14	Cufflinks	exon	96679222	96679434	1000	-	.	gene_id "uc007uuq.1"; transcript_id "uc007uuq.1"; exon_number "7"; FPKM "1.7614342028"; frac "1.000000"; conf_lo "0.851833"; conf_hi "2.671035"; cov "0.100049";
+chr14	Cufflinks	exon	99504388	99504488	1000	+	.	gene_id "uc007uvc.1"; transcript_id "uc007uvc.1"; exon_number "3"; FPKM "3.1573312214"; frac "0.277705"; conf_lo "2.620155"; conf_hi "3.694508"; cov "0.179336";
+chr15	Cufflinks	exon	12777808	12777962	1000	+	.	gene_id "uc007vic.1"; transcript_id "uc007vic.1"; exon_number "6"; FPKM "12.7118803258"; frac "0.653301"; conf_lo "7.807708"; conf_hi "17.616053"; cov "0.722034";
+chr15	Cufflinks	exon	28200049	28200282	1000	+	.	gene_id "uc007vjy.1"; transcript_id "uc007vjy.1"; exon_number "19"; FPKM "0.0608801712"; frac "1.000000"; conf_lo "0.000000"; conf_hi "0.146978"; cov "0.003458";
+chr15	Cufflinks	exon	34434714	34434889	1000	+	.	gene_id "uc007vlv.1"; transcript_id "uc007vlv.1"; exon_number "4"; FPKM "2.1698982510"; frac "1.000000"; conf_lo "1.049368"; conf_hi "3.290429"; cov "0.123250";
+chr15	Cufflinks	transcript	51709056	51716160	1000	+	.	gene_id "uc007vrc.1"; transcript_id "uc007vrc.1"; FPKM "5.0213279245"; frac "1.000000"; conf_lo "3.187798"; conf_hi "6.854858"; cov "0.285211";
+chr15	Cufflinks	exon	54880182	54880296	1000	-	.	gene_id "uc007vrt.1"; transcript_id "uc007vrt.1"; exon_number "14"; FPKM "9.7267082384"; frac "1.000000"; conf_lo "7.809774"; conf_hi "11.643643"; cov "0.552477";
+chr15	Cufflinks	exon	59176893	59177072	1000	-	.	gene_id "uc007vxs.1"; transcript_id "uc007vxs.1"; exon_number "11"; FPKM "4.5392702144"; frac "1.000000"; conf_lo "2.723562"; conf_hi "6.354978"; cov "0.257830";
+chr15	Cufflinks	exon	76426650	76426779	1000	-	.	gene_id "uc007wla.1"; transcript_id "uc007wla.1"; exon_number "3"; FPKM "3.5730073595"; frac "0.230550"; conf_lo "2.576136"; conf_hi "4.569879"; cov "0.202947";
+chr15	Cufflinks	exon	76533504	76533613	1000	+	.	gene_id "uc007wlt.1"; transcript_id "uc007wlt.1"; exon_number "4"; FPKM "3.3395072810"; frac "0.491112"; conf_lo "2.499197"; conf_hi "4.179818"; cov "0.189684";
+chr15	Cufflinks	exon	88963183	88963261	1000	-	.	gene_id "uc007xfl.1"; transcript_id "uc007xfl.1"; exon_number "3"; FPKM "1.5871531781"; frac "1.000000"; conf_lo "0.291248"; conf_hi "2.883058"; cov "0.090150";
+chr15	Cufflinks	exon	102455470	102455519	1000	-	.	gene_id "uc007xwk.1"; transcript_id "uc007xwk.1"; exon_number "13"; FPKM "0.2873090379"; frac "0.161741"; conf_lo "0.099159"; conf_hi "0.475459"; cov "0.016319";
+chr16	Cufflinks	transcript	3979123	3982204	1000	-	.	gene_id "uc007xzf.1"; transcript_id "uc007xzf.1"; FPKM "4.1992546925"; frac "0.467884"; conf_lo "2.835257"; conf_hi "5.563252"; cov "0.238518";
+chr15	Cufflinks	exon	102313591	102313719	1000	+	.	gene_id "uc007xvy.2"; transcript_id "uc007xvy.2"; exon_number "7"; FPKM "37.5792165910"; frac "0.297738"; conf_lo "34.688492"; conf_hi "40.469941"; cov "2.134498";
+chr16	Cufflinks	exon	4608598	4608818	1000	+	.	gene_id "uc007xzw.1"; transcript_id "uc007xzw.1"; exon_number "2"; FPKM "5.7793602049"; frac "1.000000"; conf_lo "4.036818"; conf_hi "7.521903"; cov "0.328267";
+chr16	Cufflinks	exon	20541820	20541939	1000	+	.	gene_id "uc007ypy.1"; transcript_id "uc007ypy.1"; exon_number "7"; FPKM "68.0268643583"; frac "1.000000"; conf_lo "60.085498"; conf_hi "75.968231"; cov "3.863924";
+chr17	Cufflinks	transcript	24857054	24858867	1000	+	.	gene_id "uc008axy.1"; transcript_id "uc008axy.1"; FPKM "22.0141466642"; frac "1.000000"; conf_lo "15.369306"; conf_hi "28.658988"; cov "1.250403";
+chr17	Cufflinks	exon	25379604	25380686	1000	-	.	gene_id "uc008bah.1"; transcript_id "uc008bah.1"; exon_number "1"; FPKM "1.7458387165"; frac "0.226783"; conf_lo "1.488719"; conf_hi "2.002959"; cov "0.099164";
+chr17	Cufflinks	exon	27159196	27159462	1000	+	.	gene_id "uc008bfe.1"; transcript_id "uc008bfe.1"; exon_number "2"; FPKM "1.7334774900"; frac "0.118977"; conf_lo "1.272113"; conf_hi "2.194842"; cov "0.098461";
+chr18	Cufflinks	exon	34787707	34787836	1000	+	.	gene_id "uc008ela.1"; transcript_id "uc008ela.1"; exon_number "7"; FPKM "5.0638001964"; frac "0.237331"; conf_lo "4.342098"; conf_hi "5.785503"; cov "0.287624";
+chr18	Cufflinks	exon	61371052	61371250	1000	-	.	gene_id "uc008fbu.1"; transcript_id "uc008fbu.1"; exon_number "4"; FPKM "0.1230526474"; frac "1.000000"; conf_lo "0.000000"; conf_hi "0.369158"; cov "0.006989";
+chr18	Cufflinks	exon	61167370	61167501	1000	-	.	gene_id "uc008fbi.1"; transcript_id "uc008fbi.1"; exon_number "12"; FPKM "2.4172869897"; frac "1.000000"; conf_lo "1.244731"; conf_hi "3.589843"; cov "0.137302";
+chr18	Cufflinks	exon	86630592	86630719	1000	+	.	gene_id "uc008fuz.1"; transcript_id "uc008fuz.1"; exon_number "6"; FPKM "2.2892787327"; frac "1.000000"; conf_lo "1.065608"; conf_hi "3.512950"; cov "0.130031";
+chr19	Cufflinks	exon	5603634	5603715	1000	-	.	gene_id "uc008gea.1"; transcript_id "uc008gea.1"; exon_number "2"; FPKM "2.1837193523"; frac "0.163446"; conf_lo "1.715120"; conf_hi "2.652319"; cov "0.124035";
+chr2	Cufflinks	exon	28404475	28404676	1000	+	.	gene_id "uc008iyn.1"; transcript_id "uc008iyn.1"; exon_number "15"; FPKM "10.9087431164"; frac "0.368384"; conf_lo "4.356515"; conf_hi "17.460972"; cov "0.619616";
+chr2	Cufflinks	exon	29770254	29770439	1000	+	.	gene_id "uc008jal.1"; transcript_id "uc008jal.1"; exon_number "12"; FPKM "7.2973656902"; frac "0.685974"; conf_lo "5.778526"; conf_hi "8.816206"; cov "0.414490";
+chr2	Cufflinks	exon	30002172	30002382	1000	+	.	gene_id "uc008jbj.1"; transcript_id "uc008jbj.1"; exon_number "8"; FPKM "12.8769808138"; frac "1.000000"; conf_lo "10.220662"; conf_hi "15.533299"; cov "0.731412";
+chr2	Cufflinks	exon	32076600	32076704	1000	+	.	gene_id "uc008jeo.1"; transcript_id "uc008jeo.1"; exon_number "21"; FPKM "43.8860660433"; frac "0.911093"; conf_lo "40.407190"; conf_hi "47.364942"; cov "2.492727";
+chr2	Cufflinks	exon	32546710	32546774	1000	-	.	gene_id "uc008jgm.1"; transcript_id "uc008jgm.1"; exon_number "12"; FPKM "8.1366623064"; frac "1.000000"; conf_lo "5.496780"; conf_hi "10.776544"; cov "0.462162";
+chr2	Cufflinks	exon	35574280	35574458	1000	+	.	gene_id "uc008jkv.1"; transcript_id "uc008jkv.1"; exon_number "6"; FPKM "2.0012109810"; frac "0.141121"; conf_lo "1.688896"; conf_hi "2.313526"; cov "0.113669";
+chr2	Cufflinks	exon	117127697	117127757	1000	-	.	gene_id "uc008lrl.1"; transcript_id "uc008lrl.1"; exon_number "14"; FPKM "1.6760710643"; frac "0.685093"; conf_lo "1.109659"; conf_hi "2.242483"; cov "0.095201";
+chr2	Cufflinks	exon	122435405	122435623	1000	-	.	gene_id "uc008maw.1"; transcript_id "uc008maw.1"; exon_number "8"; FPKM "10.5679023498"; frac "1.000000"; conf_lo "7.636894"; conf_hi "13.498911"; cov "0.600257";
+chr2	Cufflinks	exon	130265172	130265261	1000	+	.	gene_id "uc008mja.1"; transcript_id "uc008mja.1"; exon_number "9"; FPKM "3.6318426438"; frac "0.287992"; conf_lo "2.815837"; conf_hi "4.447848"; cov "0.206289";
+chr2	Cufflinks	exon	152702303	152702428	1000	+	.	gene_id "uc008ngq.1"; transcript_id "uc008ngq.1"; exon_number "7"; FPKM "2.5312142816"; frac "0.526901"; conf_lo "1.108909"; conf_hi "3.953519"; cov "0.143773";
+chr2	Cufflinks	exon	158262739	158262887	1000	+	.	gene_id "uc008nqh.1"; transcript_id "uc008nqh.1"; exon_number "8"; FPKM "5.0001206267"; frac "1.000000"; conf_lo "3.934091"; conf_hi "6.066150"; cov "0.284007";
+chr2	Cufflinks	exon	178152211	178152296	1000	+	.	gene_id "uc008ohq.1"; transcript_id "uc008ohq.1"; exon_number "3"; FPKM "1.6796903776"; frac "1.000000"; conf_lo "0.491970"; conf_hi "2.867411"; cov "0.095406";
+chr3	Cufflinks	exon	97500913	97501137	1000	-	.	gene_id "uc008qpe.1"; transcript_id "uc008qpe.1"; exon_number "7"; FPKM "4.1738869883"; frac "0.398377"; conf_lo "3.671923"; conf_hi "4.675851"; cov "0.237077";
+chr3	Cufflinks	exon	101987874	101987902	1000	-	.	gene_id "uc008qrt.1"; transcript_id "uc008qrt.1"; exon_number "4"; FPKM "0.6428024028"; frac "1.000000"; conf_lo "0.000000"; conf_hi "1.551862"; cov "0.036511";
+chr3	Cufflinks	exon	127258214	127258303	1000	+	.	gene_id "uc008rhf.1"; transcript_id "uc008rhf.1"; exon_number "2"; FPKM "0.4060755145"; frac "0.353557"; conf_lo "0.120085"; conf_hi "0.692066"; cov "0.023065";
+chr3	Cufflinks	exon	144790795	144790854	1000	+	.	gene_id "uc008rqi.1"; transcript_id "uc008rqi.1"; exon_number "5"; FPKM "1.1258808773"; frac "0.289434"; conf_lo "0.699104"; conf_hi "1.552658"; cov "0.063950";
+chr4	Cufflinks	exon	17978869	17981846	1000	+	.	gene_id "uc008sbv.1"; transcript_id "uc008sbv.1"; exon_number "5"; FPKM "0.6623587694"; frac "0.585087"; conf_lo "0.270053"; conf_hi "1.054665"; cov "0.037622";
+chr4	Cufflinks	exon	21711840	21711940	1000	+	.	gene_id "uc008scz.1"; transcript_id "uc008scz.1"; exon_number "5"; FPKM "0.9584930367"; frac "0.150841"; conf_lo "0.742054"; conf_hi "1.174932"; cov "0.054442";
+chr4	Cufflinks	exon	108353507	108353731	1000	-	.	gene_id "uc008ubn.1"; transcript_id "uc008ubn.1"; exon_number "9"; FPKM "2.6286767383"; frac "1.000000"; conf_lo "1.111010"; conf_hi "4.146344"; cov "0.149309";
+chr4	Cufflinks	exon	131325668	131325803	1000	-	.	gene_id "uc008vab.1"; transcript_id "uc008vab.1"; exon_number "2"; FPKM "4.0813960015"; frac "1.000000"; conf_lo "2.890730"; conf_hi "5.272062"; cov "0.231823";
+chr4	Cufflinks	exon	153530641	153530927	1000	+	.	gene_id "uc008wbi.1"; transcript_id "uc008wbi.1"; exon_number "12"; FPKM "21.2412511761"; frac "1.000000"; conf_lo "16.217040"; conf_hi "26.265462"; cov "1.206502";
+chr5	Cufflinks	exon	3631589	3631765	1000	+	.	gene_id "uc008whf.1"; transcript_id "uc008whf.1"; exon_number "19"; FPKM "4.6386616700"; frac "0.517324"; conf_lo "3.723563"; conf_hi "5.553760"; cov "0.263476";
+chr5	Cufflinks	exon	3992046	3992138	1000	+	.	gene_id "uc008wid.1"; transcript_id "uc008wid.1"; exon_number "15"; FPKM "23.3742995121"; frac "0.874843"; conf_lo "21.278988"; conf_hi "25.469611"; cov "1.327659";
+chr5	Cufflinks	exon	34223636	34223836	1000	+	.	gene_id "uc008xbk.1"; transcript_id "uc008xbk.1"; exon_number "12"; FPKM "4.1101744570"; frac "0.642098"; conf_lo "2.270677"; conf_hi "5.949672"; cov "0.233458";
+chr5	Cufflinks	exon	115734400	115734621	1000	+	.	gene_id "uc008zdo.1"; transcript_id "uc008zdo.1"; exon_number "3"; FPKM "15.3221708908"; frac "1.000000"; conf_lo "11.506469"; conf_hi "19.137873"; cov "0.870299";
+chr5	Cufflinks	exon	137807769	137808016	1000	+	.	gene_id "uc009aci.1"; transcript_id "uc009aci.1"; exon_number "12"; FPKM "0.7189248975"; frac "0.533440"; conf_lo "0.000000"; conf_hi "1.543846"; cov "0.040835";
+chr6	Cufflinks	transcript	17015149	17055825	1000	+	.	gene_id "uc009azi.1"; transcript_id "uc009azi.1"; FPKM "12.3429992456"; frac "1.000000"; conf_lo "9.242902"; conf_hi "15.443097"; cov "0.701082";
+chr6	Cufflinks	exon	15361026	15361102	1000	+	.	gene_id "uc009ayz.1"; transcript_id "uc009ayz.1"; exon_number "14"; FPKM "4.1692596952"; frac "0.281345"; conf_lo "2.894471"; conf_hi "5.444049"; cov "0.236814";
+chr6	Cufflinks	exon	115576309	115576426	1000	-	.	gene_id "uc009dix.1"; transcript_id "uc009dix.1"; exon_number "8"; FPKM "34.7320589881"; frac "0.628311"; conf_lo "31.195284"; conf_hi "38.268834"; cov "1.972780";
+chr6	Cufflinks	exon	117820274	117822784	1000	+	.	gene_id "uc009dld.1"; transcript_id "uc009dld.1"; exon_number "3"; FPKM "8.2141924772"; frac "1.000000"; conf_lo "5.778655"; conf_hi "10.649730"; cov "0.466566";
+chr6	Cufflinks	exon	121331667	121331759	1000	-	.	gene_id "uc009don.1"; transcript_id "uc009don.1"; exon_number "4"; FPKM "0.9373248338"; frac "0.255959"; conf_lo "0.597786"; conf_hi "1.276864"; cov "0.053240";
+chr6	Cufflinks	exon	134837648	134837803	1000	-	.	gene_id "uc009ekw.1"; transcript_id "uc009ekw.1"; exon_number "2"; FPKM "3.4342255434"; frac "0.337007"; conf_lo "2.099159"; conf_hi "4.769292"; cov "0.195064";
+chr7	Cufflinks	exon	19628774	19628924	1000	+	.	gene_id "uc009fkg.1"; transcript_id "uc009fkg.1"; exon_number "14"; FPKM "3.4380795645"; frac "0.240903"; conf_lo "2.901335"; conf_hi "3.974824"; cov "0.195283";
+chr7	Cufflinks	transcript	51739887	51740783	1000	+	.	gene_id "uc009gpo.1"; transcript_id "uc009gpo.1"; FPKM "3.5875651083"; frac "1.000000"; conf_lo "0.658330"; conf_hi "6.516800"; cov "0.203774";
+chr7	Cufflinks	exon	53085965	53086159	1000	-	.	gene_id "uc009gxj.1"; transcript_id "uc009gxj.1"; exon_number "6"; FPKM "6.4200658663"; frac "0.543693"; conf_lo "4.666748"; conf_hi "8.173383"; cov "0.364660";
+chr7	Cufflinks	exon	77546982	77547077	1000	+	.	gene_id "uc009hnk.1"; transcript_id "uc009hnk.1"; exon_number "7"; FPKM "0.4622078998"; frac "0.405823"; conf_lo "0.077413"; conf_hi "0.847003"; cov "0.026253";
+chr7	Cufflinks	exon	82788205	82788350	1000	+	.	gene_id "uc009hwu.1"; transcript_id "uc009hwu.1"; exon_number "1"; FPKM "0.6859341657"; frac "0.576962"; conf_lo "0.055268"; conf_hi "1.316600"; cov "0.038961";
+chr7	Cufflinks	exon	85984891	85985078	1000	-	.	gene_id "uc009hxo.1"; transcript_id "uc009hxo.1"; exon_number "3"; FPKM "3.0017741434"; frac "1.000000"; conf_lo "1.397258"; conf_hi "4.606290"; cov "0.170501";
+chr7	Cufflinks	exon	148509981	148510078	1000	-	.	gene_id "uc009kkn.1"; transcript_id "uc009kkn.1"; exon_number "11"; FPKM "32.9197864125"; frac "1.000000"; conf_lo "27.375094"; conf_hi "38.464479"; cov "1.869843";
+chr9	Cufflinks	exon	15330072	15330148	1000	+	.	gene_id "uc009ogc.1"; transcript_id "uc009ogc.1"; exon_number "2"; FPKM "1.0060367764"; frac "1.000000"; conf_lo "0.000000"; conf_hi "2.428788"; cov "0.057143";
+chr9	Cufflinks	transcript	21069743	21078812	1000	+	.	gene_id "uc009okt.1"; transcript_id "uc009okt.1"; FPKM "7.9134805855"; frac "0.623402"; conf_lo "5.930640"; conf_hi "9.896321"; cov "0.449485";
+chr9	Cufflinks	exon	57867100	57867303	1000	+	.	gene_id "uc009pwa.1"; transcript_id "uc009pwa.1"; exon_number "4"; FPKM "0.5359102332"; frac "1.000000"; conf_lo "0.000000"; conf_hi "1.293802"; cov "0.030440";
+chr9	Cufflinks	exon	49314958	49315758	1000	-	.	gene_id "uc009pje.1"; transcript_id "uc009pje.1"; exon_number "2"; FPKM "156.0206032233"; frac "0.793945"; conf_lo "147.369898"; conf_hi "164.671308"; cov "8.861965";
+chr9	Cufflinks	exon	106815438	106815604	1000	-	.	gene_id "uc009rkv.1"; transcript_id "uc009rkv.1"; exon_number "12"; FPKM "5.4023275754"; frac "1.000000"; conf_lo "4.337713"; conf_hi "6.466942"; cov "0.306852";
+chr9	Cufflinks	exon	119703054	119703292	1000	-	.	gene_id "uc009sbk.1"; transcript_id "uc009sbk.1"; exon_number "15"; FPKM "0.0814657030"; frac "1.000000"; conf_lo "0.000000"; conf_hi "0.244397"; cov "0.004627";
\ No newline at end of file