--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/gbk2rdf.xml	Mon Jul 04 10:37:59 2016 -0400
@@ -0,0 +1,24 @@
+<tool id="DGBK2RDF" name="EMBL/GBK to RDF" version="0.1">
+	<description>Converts GenBank/EMBL files to RDF</description>
+	<requirements>
+		<container type="docker">jjkoehorst/sappdocker:GBK2RDF</container>
+  	</requirements>
+	<command>java -jar /genbank2rdf/GenBank2RDF-0.0.1-SNAPSHOT-jar-with-dependencies.jar '-input' '$input' -output '$output' -source "$source" -format "$format" -identifier "${input.name}" -codon "$codon" </command>
+	<inputs>
+		<param format="gbk,gb,genbank" label="Genbank file" name="input" type="data"/>
+		<param label="EMBL/GBK" name="format" type="select">
+			<option value="gbk">Genbank</option>
+			<option selected="true" value="embl">EMBL</option>
+		</param>
+		<param label="11/4" name="codon" type="select">
+			<option selected="true" value="11">11</option>
+			<option value="4">4</option>
+		</param>
+		<param label="Source of annotation eg. RAST/NCBI/EBI" name="source" optional="false" type="text"/>
+	</inputs>
+	<outputs>
+		<data format="ttl" label="GBKttl: ${input.name}" name="output"/>
+	</outputs>
+	<help>Java Genbank or EMBL to RDF conversion
+	</help>
+</tool>