Mercurial > repos > jjkoehorst > sapp
view conversion/gbk2rdf/tool_dependencies.xml @ 29:dd59731d50b5
Biopython and python3.4 inclusion test.
author | Jasper Koehorst <jasperkoehorst@gmail.com> |
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date | Wed, 25 Feb 2015 08:25:32 +0100 |
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<?xml version="1.0"?> <tool_dependency> <package name="zlib" version="1.2.8"> <repository name="package_zlib_1_2_8" owner="iuc" prior_installation_required="True" /> </package> <package name="readline" version="6.2"> <repository name="package_readline_6_2" owner="iuc" prior_installation_required="True" /> </package> <package name="bzlib" version="1.0.6"> <repository name="package_bzlib_1_0" owner="iuc" prior_installation_required="True" /> </package> <package name="xz" version="5.0.5"> <repository name="package_xz_5_0_5" owner="iuc" prior_installation_required="True" /> </package> <package name="openssl" version="1.0.1"> <repository name="package_openssl_1_0" owner="iuc" prior_installation_required="True" /> </package> <package name="sqlite" version="3.8.3"> <repository name="package_sqlite_3_8_3" owner="iuc" prior_installation_required="True" /> </package> <package name="gdbm" version="1.11"> <repository name="package_gdbm_1_11" owner="iuc" prior_installation_required="True" /> </package> <package name="ncurses" version="5.9"> <repository name="package_ncurses_5_9" owner="iuc" prior_installation_required="True" /> </package> <package name="python" version="3.4"> <install version="1.0"> <actions> <action type="download_by_url">https://www.python.org/ftp/python/3.4.1/Python-3.4.1.tgz</action> <action type="set_environment_for_install"> <repository name="package_zlib_1_2_8" owner="iuc"> <package name="zlib" version="1.2.8" /> </repository> <repository name="package_readline_6_2" owner="iuc"> <package name="readline" version="6.2" /> </repository> <repository name="package_bzlib_1_0" owner="iuc"> <package name="bzlib" version="1.0.6" /> </repository> <repository name="package_xz_5_0_5" owner="iuc"> <package name="xz" version="5.0.5" /> </repository> <repository name="package_openssl_1_0" owner="iuc"> <package name="openssl" version="1.0.1" /> </repository> <repository name="package_sqlite_3_8_3" owner="iuc"> <package name="sqlite" version="3.8.3" /> </repository> <repository name="package_gdbm_1_11" owner="iuc"> <package name="gdbm" version="1.11" /> </repository> <repository name="package_ncurses_5_9" owner="iuc"> <package name="ncurses" version="5.9" /> </repository> </action> <action type="autoconf" /> <action type="download_file">https://bitbucket.org/pypa/setuptools/get/5.2.tar.bz2</action> <action type="shell_command">tar -xjf 5.2.tar.bz2</action> <action type="change_directory">pypa-setuptools-f493e6c4ffd8</action> <action type="shell_command">export PATH=$PATH:$INSTALL_DIR/bin && export PYTHONHOME=$INSTALL_DIR && export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR && export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python3.4/site-packages/ && export PKG_CONFIG_PATH=$PKG_CONFIG_PATH:$INSTALL_DIR/lib/pkgconfig && $INSTALL_DIR/bin/python3 setup.py install --prefix=$INSTALL_DIR</action> <action type="set_environment"> <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable> <environment_variable action="set_to" name="PYTHONHOME">$INSTALL_DIR</environment_variable> <environment_variable action="prepend_to" name="PKG_CONFIG_PATH">$INSTALL_DIR/lib/pkgconfig</environment_variable> </action> </actions> </install> <package name="biopython" version="1.61"> <repository changeset_revision="ae9dda584395" name="package_biopython_1_61" owner="biopython" toolshed="https://toolshed.g2.bx.psu.edu" /> </package> <readme> The Python programming language version 3.4. hopefully incombination with python3.4 http://www.python.org </readme> </package> </tool_dependency>