# HG changeset patch
# User jjkoehorst
# Date 1424521719 18000
# Node ID db04e12b8779ed83bc1c91351f47cb7b994156c9
# Parent 89be6bd55b4cef334cd901c418e32a76cdc29ccd
Uploaded
diff -r 89be6bd55b4c -r db04e12b8779 gbk2rdf.zip
Binary file gbk2rdf.zip has changed
diff -r 89be6bd55b4c -r db04e12b8779 gbk2rdf/gbktordf.py
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/gbk2rdf/gbktordf.py Sat Feb 21 07:28:39 2015 -0500
@@ -0,0 +1,371 @@
+#!/usr/bin/env python3.4
+# Author: Jasper Jan Koehorst
+# Date created: Feb 21 2015
+# Function: generation of a RDF file from Genbank/EMBL
+
+import warnings
+warnings.filterwarnings("ignore")
+
+def delete_galaxy():
+ import sys
+ for index, path in enumerate(sys.path):
+ if "galaxy-dist/" in path:
+ sys.path[index] = ''
+
+#Some modules that are required by RDFLIB are also in galaxy, this messes up the RDF import function. This is not an elegant solution but it works for now.
+delete_galaxy()
+
+from Bio import SeqIO
+# Import RDFLib's default Graph implementation.
+import os, sys
+from Bio.Seq import Seq
+
+from rdflib import Graph, URIRef, Literal,Namespace,RDF,RDFS,OWL, plugin
+from rdflib.store import Store
+import hashlib
+store = plugin.get('IOMemory', Store)()
+
+global URI
+URI = "http://csb.wur.nl/genome/"
+global seeAlso
+seeAlso = "rdfs:seeAlso"
+global coreURI
+coreURI = Namespace(URI)
+
+global SubClassOfDict
+SubClassOfDict = {}
+global SubClassOfDictRna
+SubClassOfDictRna = {}
+
+def createClass(uri, root=True):
+ genomeGraph.add((uri,RDF.type,OWL.Class))
+ if root:
+ genomeGraph.add((uri,RDFS.subClassOf,OWL.Thing))
+ return uri
+
+def tmp():
+ import time
+ global tmpFolder
+ tmpFolder = "/tmp/"+str(time.time())+"/"
+ os.mkdir(tmpFolder)
+
+def cleantmp():
+ os.system("ls "+tmpFolder)
+ os.system("rm -rf "+tmpFolder)
+
+def crawler():
+ #From input folder it looks for GBK file (gz files are in progress)
+ input_file = sys.argv[sys.argv.index("-input")+1]
+ gbk_parser(input_file)
+
+def gbk_parser():
+ prevObjStart = -1
+ prevObjStop = -1
+ store = plugin.get('IOMemory', Store)()
+ global genomeGraph
+ genomeGraph = Graph(store,URIRef(URI))
+ genomeGraph.bind("ssb",coreURI)
+ input_file = sys.argv[sys.argv.index("-input")+1]
+
+ #CLASS definitions
+ genomeClass = createClass(coreURI["Genome"], root=True)
+ typeClass = createClass(coreURI["DnaObject"], root=True)
+ createClass(coreURI["Protein"], root=True)
+ pubmedClass = createClass(coreURI["Pubmed"], root=True)
+ miscClass = createClass(coreURI["MiscFeature"], root=False)
+ createClass(coreURI["Feature"], root=True)
+ SubClassOfDict["MiscFeature"] = 1
+ SubClassOfDictRna["Trna"] = 1
+ SubClassOfDictRna["Rrna"] = 1
+ SubClassOfDictRna["Tmrna"] = 1
+ SubClassOfDictRna["Ncrna"] = 1
+
+# codon = "11" #Default initialization if no CDS are present
+ ##################
+ weird_chars = list(''',./?<>:;"'|\}]{[+=_-)(*&^%$#@!±§~` ''')
+ scaf_value = 0
+ #Which files are already done
+ ########
+ formatGBK = sys.argv[sys.argv.index("-format")+1]
+ for record in SeqIO.parse(input_file, formatGBK):
+ #Read first feature for genome name and information...
+ #Ignore the empty GBK file due to the lack of features?
+
+ for index, feature in enumerate(record.features):
+ if index == 0:
+ if "-identifier" in sys.argv:
+ genome = sys.argv[sys.argv.index("-identifier")+1]
+ else:
+ try:
+ genome = feature.qualifiers["organism"][0].replace(" ","_")
+ except:
+ #BUG: THIS IS A TEMP FIX, USE GALAXY -IDENTIFIER TO CAPTURE THIS
+ genome = "XNoneX"
+ for char in weird_chars:
+ genome = genome.replace(char,"_")
+
+ try:
+ gi = record.annotations["gi"]
+ typ = str(gi)
+ except:
+ scaf_value += 1
+ typ = "scaffold_"+str(scaf_value)
+ genomeURI = coreURI[genome]
+ gbkURI = coreURI[genome + "/" + typ]
+ #To contig connection to connect all data to it
+ genomeGraph.add((genomeURI, coreURI["dnaobject"] , gbkURI))
+
+ #General genome features also stored in the class...
+ if "genome" in feature.qualifiers:
+ genomeGraph.add((genomeURI, coreURI["organism"],Literal(feature.qualifiers["organism"][0])))
+ if "strain" in feature.qualifiers:
+ genomeGraph.add((genomeURI, coreURI["strain"],Literal(feature.qualifiers["strain"][0])))
+ if "taxonomy" in record.annotations:
+ for taxon in record.annotations["taxonomy"]:
+ genomeGraph.add((genomeURI, coreURI["taxonomy"],Literal(taxon)))
+ record.annotations["taxonomy"] = []
+ #Genome sequence#
+ sequence = str(record.seq)
+ #Verify if sequence was not empty and is now full of X or N
+ filtered_sequence = sequence.replace("X","").replace("N","")
+ if len(filtered_sequence) == 0:
+ sequence = ""
+ #Record parsing#
+ for annot in record.annotations:
+ if type(record.annotations[annot]) == list:
+ if annot == "references":
+ for references in record.annotations[annot]:
+ if references.pubmed_id != "":
+ pubmed = references.pubmed_id
+ genomeGraph.add((gbkURI, coreURI[annot.lower()] , coreURI["pubmed/"+pubmed]))
+ obj_dict = references.__dict__
+ for key in obj_dict:
+ genomeGraph.add((coreURI["pubmed/"+pubmed], coreURI[key.lower()], Literal(str(obj_dict[key]))))
+ genomeGraph.add((coreURI["pubmed/"+pubmed], RDF.type, pubmedClass))
+
+ else:
+ for a in record.annotations[annot]:
+ int_add(gbkURI,coreURI[annot.lower()],str(a))
+ else:
+ int_add(gbkURI,coreURI[annot.lower()],str(record.annotations[annot]))
+
+
+ #####END of RECORD####
+ if len(sequence) > 0:
+ genomeGraph.add((gbkURI, coreURI["sequence"] , Literal(sequence)))
+ genomeGraph.add((genomeURI, RDF.type,genomeClass))
+ genomeGraph.add((gbkURI, RDF.type,typeClass))
+ for key in feature.qualifiers:
+ genomeGraph.add((gbkURI, coreURI[key.lower()] , Literal(feature.qualifiers[key][0])))
+ #break
+ else: #The rest of the GBK file
+ feature_type = feature.type
+ end = str(feature.location.end).replace(">","").replace("<","")
+ start = str(feature.location.start).replace(">","").replace("<","")
+
+ strand = str(feature.location.strand)
+
+ if strand == 'None':
+ strand = 0
+
+# if feature_type == "gene":
+# gene = feature
+ #Store gene in next feature....
+# gene_location_start = end = str(gene.location.end).replace(">","").replace("<","")
+# gene_location_stop = str(gene.location.start).replace(">","").replace("<","")
+# gene_qualifiers = gene.qualifiers
+ else:
+ if feature.type == "misc_feature": #Store as part of previous cds or something...
+ if strand == "-1":
+ miscURI = coreURI[genome + "/" + typ + "/"+feature_type+"/gbk/"+str(end)+"_"+str(start)]
+ else:
+ miscURI = coreURI[genome + "/" + typ + "/"+feature_type+"/gbk/"+str(start)+"_"+str(end)]
+
+ # genomeGraph.add((generalURI,coreURI["subFeature"],miscURI))
+
+ # TODO: Check if biopython has an overlap function...
+ if int(prevObjStart) <= int(start):
+ if int(end) <= int(prevObjStop):
+ pass
+# genomeGraph.add((typeURI,coreURI["feature"],miscURI))
+# genomeGraph.add((miscURI,RDF.type,miscClass))
+ else:
+ genomeGraph.add((gbkURI, coreURI["feature"] , miscURI))
+ genomeGraph.add((miscURI,RDF.type,miscClass))
+ else:
+ genomeGraph.add((gbkURI, coreURI["feature"] , miscURI))
+ genomeGraph.add((miscURI,RDF.type,miscClass))
+
+ store_general_information(miscURI,feature,record)
+ else:
+ prevObjStart = start
+ prevObjStop = end
+
+
+ if strand == "-1":
+ typeURI = coreURI[genome + "/" + typ + "/" + feature_type+"/gbk/"+str(end)+"_"+str(start)]
+ else:
+ typeURI = coreURI[genome + "/" + typ + "/" + feature_type+"/gbk/"+str(start)+"_"+str(end)]
+
+# cds_sequence = str(feature.extract(sequence))
+ #Contig specific connection
+
+ genomeGraph.add((gbkURI, coreURI["feature"] , typeURI))
+ ############################
+
+ store_general_information(typeURI,feature,record)
+
+ for subfeature in feature.sub_features:
+ strand = str(subfeature.location.strand)
+ subfeature_type = subfeature.type
+ end = str(subfeature.location.end).replace(">","").replace("<","")
+ start = str(subfeature.location.start).replace(">","").replace("<","")
+
+ if strand == "-1":
+ subURI = coreURI[genome + "/" + typ + "/" + subfeature_type+"/gbk/"+str(end)+"_"+str(start)]
+ else:
+ subURI = coreURI[genome + "/" + typ + "/" + subfeature_type+"/gbk/"+str(start)+"_"+str(end)]
+ genomeGraph.add((typeURI, coreURI["feature"] , subURI))
+ store_general_information(subURI,subfeature,record,feature)
+
+def store_general_information(generalURI,feature,record,superfeature=""):
+ proteinClass = createClass(coreURI["Protein"], root=True)
+ sequence = str(record.seq)
+ cds_sequence = str(feature.extract(sequence))
+ #Fixes the 0 count instead of 1-count in biopython vs humans
+ feature_type = feature.type
+ end = str(feature.location.end).replace(">","").replace("<","")
+ start = str(feature.location.start).replace(">","").replace("<","")
+ strand = str(feature.location.strand)
+ if strand == "None":
+ strand = 0
+
+ genomeGraph.add((generalURI,coreURI["sourcedb"],Literal(sys.argv[sys.argv.index("-sourcedb")+1])))
+
+ if strand == "-1":
+ genomeGraph.add((generalURI,coreURI["end"],Literal(int(start)+1)))
+ genomeGraph.add((generalURI,coreURI["begin"],Literal(int(end))))
+ else:
+ genomeGraph.add((generalURI,coreURI["begin"],Literal(int(start)+1)))
+ genomeGraph.add((generalURI,coreURI["end"],Literal(int(end))))
+ genomeGraph.add((generalURI,coreURI["strand"],Literal(int(strand))))
+ if feature.type != "misc_feature":
+ try:
+ genomeGraph.add((generalURI,coreURI["sequence"],Literal(cds_sequence)))
+ except: #When protein sequence is not given for whatever reason
+ print ("wrong?")
+
+ if feature.type == "misc_feature":
+ pass
+ else:
+ genomeGraph.add((generalURI,RDF.type,createClass(coreURI[feature_type.lower().title()], root=False)))
+ if feature_type.lower() != "rrna" and feature_type.lower() != "trna" and feature_type.lower() != "tmrna" and feature_type.lower() != "ncrna":
+ SubClassOfDict[feature_type.lower().title()] = 1
+ for key in feature.qualifiers:
+ values = feature.qualifiers[key]
+ if key == "translation":
+ pass
+ elif type(values) == list:
+ for v in values:
+ int_add(generalURI,coreURI[key.lower()],v)
+ else:
+ int_add(generalURI,coreURI[key.lower()],values)
+ if feature.type == "CDS":
+ try:
+ #Feature is normally submitted to this function
+ #IF a subfeature is submitted it is submitted as a feature
+ #And subfeature variable will contain the superfeature
+ if superfeature:
+ codon = superfeature.qualifiers["transl_table"][0]
+# else:
+# codon = subfeature.qualifiers["transl_table"][0]
+ except:
+ #Default codon table 11
+ codon = "11"
+ #Protein linkage
+ translation = ""
+ try:
+ translation = feature.qualifiers["translation"][0].strip("*")
+ except KeyError:
+ #When protein sequence is not given...
+ if len(feature.location.parts) > 1:
+ #Exon boundaries?
+ seq = ''
+ for loc in feature.location:
+ seq += record.seq[loc]
+ if int(feature.location.strand) == -1:
+ seq = Seq(seq).complement()
+ else:
+ seq = Seq(seq)
+ translation = str(seq.translate(feature.qualifiers["transl_table"][0]))
+ elif int(feature.location.strand) == -1:
+ if str(record.seq[feature.location.nofuzzy_start:feature.location.nofuzzy_end].reverse_complement().translate(codon)).strip("*") != translation:
+ if len(str(record.seq[feature.location.nofuzzy_start:feature.location.nofuzzy_end])) % 3 == 0:
+ translation = str(record.seq[feature.location.nofuzzy_start:feature.location.nofuzzy_end].reverse_complement().translate(codon))
+ else:
+ translation = ''
+ elif int(feature.location.strand) == +1:
+ if len(str(record.seq[feature.location.nofuzzy_start:feature.location.nofuzzy_end])) % 3 == 0:
+ translation = str(record.seq[feature.location.nofuzzy_start:feature.location.nofuzzy_end].translate(codon))
+ else:
+ translation = ''
+
+ if translation:
+ translation = list(translation)
+ translation[0] = "M"
+ translation = ''.join(translation).strip("*")
+ if "*" in translation:
+ pass
+
+ translation = translation.encode('utf-8')
+ md5_protein = hashlib.md5(translation).hexdigest()
+ proteinURI = coreURI["protein/"+md5_protein]
+ genomeGraph.add((generalURI,coreURI["protein"],proteinURI))
+ for key in feature.qualifiers:
+ for v in feature.qualifiers[key]:
+ if key == "translation":
+ genomeGraph.add((proteinURI,coreURI["md5"],Literal(md5_protein)))
+ genomeGraph.add((proteinURI,coreURI["sequence"],Literal(translation)))
+ genomeGraph.add((proteinURI,RDF.type,proteinClass))
+ else:
+ for v in feature.qualifiers[key]:
+ int_add(generalURI,coreURI[key.lower()],v)
+
+def int_add(subject, predicate, obj):
+ try:
+ object_float = float(obj.replace('"',''))
+ object_int = int(obj.replace('"',''))
+ if object_int == object_float:
+ genomeGraph.add((subject,predicate,Literal(object_int)))
+ else:
+ genomeGraph.add((subject,predicate,Literal(object_float)))
+ except:
+ genomeGraph.add((subject,predicate,Literal(obj.replace('"',''))))
+
+def save():
+ data = genomeGraph.serialize(format='turtle')
+ open(sys.argv[sys.argv.index("-output")+1],"wb").write(data)
+
+def subClassOfBuilder():
+ for subclass in SubClassOfDict:
+ genomeGraph.add((coreURI["Feature"],RDFS.subClassOf,OWL.Thing))
+ genomeGraph.add((coreURI[subclass],RDFS.subClassOf,coreURI["Feature"]))
+
+def subClassOfBuilderRna():
+ for subclass in SubClassOfDictRna:
+ genomeGraph.add((coreURI["Feature"],RDFS.subClassOf,OWL.Thing))
+ genomeGraph.add((coreURI["Rna"],RDFS.subClassOf,coreURI["Feature"]))
+ genomeGraph.add((coreURI[subclass],RDFS.subClassOf,coreURI["Rna"]))
+ genomeGraph.add((coreURI[subclass],RDFS.subClassOf,coreURI["Rna"]))
+ genomeGraph.add((coreURI[subclass],RDF.type,OWL.Class))
+
+def main():
+ tmp()
+ gbk_parser()
+ subClassOfBuilder()
+ subClassOfBuilderRna()
+ save()
+ cleantmp()
+
+if __name__ == "__main__":
+ main()
\ No newline at end of file
diff -r 89be6bd55b4c -r db04e12b8779 gbk2rdf/gbktordf.xml
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/gbk2rdf/gbktordf.xml Sat Feb 21 07:28:39 2015 -0500
@@ -0,0 +1,32 @@
+<tool id="SAPP_genbank_to_ttl" name="EMBL/GBK to RDF" version="0.1">
+ <requirements>
+ <requirement type='package' version="3.4">python</requirement>
+ <requirement type='package' version="1.0">rdflib</requirement>
+ </requirements>
+ <description>Genbank to RDF conversion</description>
+ <command interpreter="python3.4">gbktordf.py '-input' '$input' -output '$output' -sourcedb "$format" -format "$format"</command>
+ <inputs>
+ <param name="input" type="data" format="gbk,gb,genbank" label="Genbank file"/>
+ <param name="format" type="select" label="EMBL/GBK">
+ <option value="genbank" selected="true"> Genbank</option>
+ <option value="embl"> EMBL </option>
+ </param>
+ </inputs>
+
+ <outputs>
+ <data format="rdf" name="output" label="GBKttl: ${input.name}" />
+ </outputs>
+
+ <tests>
+ <test>
+ <param name="input" value="test-data/NC_010067.gbk"/>
+ <output name="$output" file="NC_010067.rdf"/>
+ <output name="$format" value="genbank"/>
+ <output name="$sourcedb" value="genbank"/>
+ </test>
+ </tests>
+
+ <help>
+ Genbank or EMBL to RDF conversion
+ </help>
+</tool>
diff -r 89be6bd55b4c -r db04e12b8779 gbk2rdf/test-data/NC_010067.gbk
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/gbk2rdf/test-data/NC_010067.gbk Sat Feb 21 07:28:39 2015 -0500
@@ -0,0 +1,259779 @@
+LOCUS NC_010067 4600800 bp DNA circular CON 20-AUG-2013
+DEFINITION Salmonella enterica subsp. arizonae serovar 62:z4,z23:- str.
+ RSK2980 chromosome, complete genome.
+ACCESSION NC_010067
+VERSION NC_010067.1 GI:161501984
+DBLINK Project: 58191
+ BioProject: PRJNA58191
+KEYWORDS .
+SOURCE Salmonella enterica subsp. arizonae serovar 62:z4,z23:- str.
+ RSK2980
+ ORGANISM Salmonella enterica subsp. arizonae serovar 62:z4,z23:- str.
+ RSK2980
+ Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
+ Enterobacteriaceae; Salmonella.
+REFERENCE 1 (bases 1 to 4600800)
+ CONSRTM NCBI Genome Project
+ TITLE Direct Submission
+ JOURNAL Submitted (03-DEC-2007) National Center for Biotechnology
+ Information, NIH, Bethesda, MD 20894, USA
+REFERENCE 2 (bases 1 to 4600800)
+ AUTHORS McClelland,M., Sanderson,E.K., Porwollik,S., Spieth,J.,
+ Clifton,W.S., Fulton,R., Chunyan,W., Wollam,A., Shah,N., Pepin,K.,
+ Bhonagiri,V., Nash,W., Johnson,M., Thiruvilangam,P. and Wilson,R.
+ CONSRTM The Salmonella enterica serovar Arizonae Genome Sequencing Project
+ TITLE Direct Submission
+ JOURNAL Submitted (02-NOV-2007) Genetics, Genome Sequencing Center, 4444
+ Forest Park Parkway, St. Louis, MO 63108, USA
+COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
+ NCBI review. The reference sequence was derived from CP000880.
+ Salmonella enterica subspecies IIIa (Arizonae) serovar
+ 62:z4,z23:--Most bacteria in the species S. enterica belong to one
+ of seven subspecies; all but subspecies I normally grow only in
+ cold-blooded animals. Subspecies IIIa (S. Arizonae) is naturally
+ found in reptiles, but also causes outbreaks of salmonellosis in
+ turkeys and sheep and can occasionally produce both gastroenteritis
+ and serious disseminated disease in humans. Many human infections
+ can be traced to contact with reptiles or ingestion of various
+ reptile products, particularly from rattlesnakes. Fewer than ten
+ cases in humans are typically reported in the US each year.
+
+ The strain of S. Arizonae (62:z4,z23:-) being sequenced is
+ CDC346-86; it was named RSK2980 by R.K. Selander and is strain
+ SARC5 of the Salmonella Reference C set. This serovar is of
+ interest because of its taxonomic position. It appears to be the
+ most divergent subspecies among the S. enterica. It can be obtained
+ from the American Type Culture Collection as ATCC BAA-731, or the
+ Salmonella Genetic Stock Centre as SGSC4693. The genome was
+ sequenced to 8X coverage, using plasmid and fosmid libraries and
+ was finished to an error rate of less than 1 per 10,000 bases.
+ Automated annotation was performed and manual annotation will
+ continue in the labs of Michael McClelland and Kenneth Sanderson.
+ The National Institute of Allergy and Infectious Diseases (NIAID),
+ National Institutes of Health (NIH) has funded this project.
+
+ Coding sequences below are predicted using GeneMark v3.3 and
+ Glimmer2 v2.13.Intergenic regions not spanned by GeneMark and
+ Glimmer2 were blasted against NCBI's non-redundant (NR) database
+ and predictions generated based on protein alignments. RNA genes
+ were determined using tRNAscan-SE 1.23 or Rfam v8.0. This sequence
+ was finished as follows unless otherwise noted: all regions were
+ double stranded, sequenced with an alternate chemistries or covered
+ by high quality data(i.e., phred quality >=30);an attempt was made
+ to resolve all sequencing problems, such as compressions and
+ repeats; all regions were covered by sequence from more than one
+ m13 subclone.
+ COMPLETENESS: full length.
+FEATURES Location/Qualifiers
+ source 1..4600800
+ /organism="Salmonella enterica subsp. arizonae serovar
+ 62:z4,z23:- str. RSK2980"
+ /mol_type="genomic DNA"
+ /strain="RSK2980"
+ /serovar="62:z4,z23:--"
+ /sub_species="arizonae"
+ /culture_collection="ATCC:BAA-731"
+ /db_xref="taxon:882884"
+ unsure 3
+ /note="Sequence derived from one plasmid subclone"
+ gene 978..2318
+ /locus_tag="SARI_00001"
+ CDS 978..2318
+ /locus_tag="SARI_00001"
+ /inference="protein motif:HMMPanther:IPR001354"
+ /inference="protein motif:HMMPfam:IPR013341"
+ /inference="protein motif:HMMPfam:IPR013342"
+ /inference="protein motif:ScanRegExp:IPR001354"
+ /inference="similar to AA sequence:INSD:AAL21841.1"
+ /note="'KEGG: stm:STM2961 8.8e-243 ygcY; putative
+ D-glucarate dehydratase K01706;
+ COG: COG4948 L-alanine-DL-glutamate epimerase and related
+ enzymes of enolase superfamily;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569097.1"
+ /db_xref="GI:161501985"
+ /db_xref="InterPro:IPR001354"
+ /db_xref="InterPro:IPR013341"
+ /db_xref="InterPro:IPR013342"
+ /translation="MTRQSSPVITDMKVIPVAGHDSMLLNIGGAHNAYFTRNIVVLTD
+ NAGHTGVGEAPGGEVIYQTLVDAIPMVLGQEVARLNSVVQRVHKGNQAADFDTFGKGA
+ WTFELRVNAVAALEAALLDLLGQALNVPVCELLGPGKQRDAVTVLGYLFYIGDRTKTE
+ LPYLESTPGSHEWYRLRHQEALNSDTVVRLAEASQDRYGFKDFKLKGGVLPGEQEIDT
+ VRALKKRFPDARITVDPNGAWLLDEAIALCKGLNDVLAYAEDPCGAEQGFSGREVMAE
+ FRRATGLPVATNMIATNWREMGHAVMLNAVDIPLADPHFWTLSGAVRVAQLCDDWGLT
+ WGCHSNNHFDISLAMFTHVGAAAPGKPTAIDTHWIWQEGDCRLTKNPLEIKNGTIAVP
+ DAPGLGVELDWEQVRKAHDAYKKLPGGARNDAGPMQYLIPGWTFDRKRPVFGRH"
+ misc_feature 990..2312
+ /locus_tag="SARI_00001"
+ /note="glucarate dehydratase; Region: glucar-dehydr;
+ TIGR03247"
+ /db_xref="CDD:211799"
+ misc_feature 999..2225
+ /locus_tag="SARI_00001"
+ /note="D-Glucarate dehydratase (GlucD) catalyzes the
+ dehydration of both D-glucarate and L-idarate to form
+ 5-keto-4-deoxy-D-glucarate (5-KDG) , the initial reaction
+ of the catabolic pathway for (D)-glucarate. GlucD belongs
+ to the enolase superfamily of enzymes; Region:
+ D-glucarate_dehydratase; cd03323"
+ /db_xref="CDD:239439"
+ misc_feature order(1053..1055,1068..1070,1422..1424,1587..1589,
+ 1593..1595,1677..1679,1683..1685,1752..1754,1839..1841,
+ 1989..1997,2076..2078)
+ /locus_tag="SARI_00001"
+ /note="active site"
+ /db_xref="CDD:239439"
+ misc_feature order(1215..1220,1227..1229,1353..1358,1374..1385,
+ 1788..1793,1803..1805,1809..1814,1857..1862,1872..1874,
+ 1944..1946,1953..1955,1965..1976)
+ /locus_tag="SARI_00001"
+ /note="tetramer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:239439"
+ gene 2375..3679
+ /locus_tag="SARI_00002"
+ CDS 2375..3679
+ /locus_tag="SARI_00002"
+ /inference="protein motif:HMMPanther:IPR001354"
+ /inference="protein motif:HMMPfam:IPR013342"
+ /inference="similar to AA sequence:INSD:AAX66806.1"
+ /note="'KEGG: sec:SC2900 8.7e-236 gudD; D-glucarate
+ dehydratase K01706;
+ COG: COG4948 L-alanine-DL-glutamate epimerase and related
+ enzymes of enolase superfamily;
+ Psort location: vesicles of secretory system, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569098.1"
+ /db_xref="GI:161501986"
+ /db_xref="InterPro:IPR001354"
+ /db_xref="InterPro:IPR013342"
+ /translation="MQVIPVAGHDSMLMNLSGAHAPFFTRNIVIIKDNSGHTGVGEIP
+ GGEKIRKTLEDAIPLVMGKTLGEYKNVLTAVRNQFADRDAGGRGLQTFDLRTTIHVVT
+ GIEAAMLDLLGQHLGVNVASLLGDGQQRSEVEMLGYLFFVGNRKATPLPYQSQPDEQC
+ DWYRLRHEEAMTPETVVRLAEAAYEKYGFNDFKLKGGVLAGEEEAESIVALAKRFPNA
+ RVTLDPNGAWSLNEAINIGRYLKGSLAYAEDPCGAEQGFSGREVMAEFRRATGLPTAT
+ NMIATDWRQMGHTLSLQSVDIPLADPHFWTMQGSVRVAQMCHEFGLTWGSHSNNHFDI
+ SLAMFTHVAAAAPGKITAIDTHWIWQEGNQRLTKEPFEIKGGMVQVPAKPGLGVEIDM
+ DQVMKAHELYQKHGLGARDDAMGMQYLIPGWTFDNKRPCMVR"
+ misc_feature 2375..3676
+ /locus_tag="SARI_00002"
+ /note="glucarate dehydratase; Region: glucar-dehydr;
+ TIGR03247"
+ /db_xref="CDD:211799"
+ misc_feature 2375..3589
+ /locus_tag="SARI_00002"
+ /note="D-Glucarate dehydratase (GlucD) catalyzes the
+ dehydration of both D-glucarate and L-idarate to form
+ 5-keto-4-deoxy-D-glucarate (5-KDG) , the initial reaction
+ of the catabolic pathway for (D)-glucarate. GlucD belongs
+ to the enolase superfamily of enzymes; Region:
+ D-glucarate_dehydratase; cd03323"
+ /db_xref="CDD:239439"
+ misc_feature order(2417..2419,2432..2434,2786..2788,2951..2953,
+ 2957..2959,3041..3043,3047..3049,3116..3118,3203..3205,
+ 3353..3361,3440..3442)
+ /locus_tag="SARI_00002"
+ /note="active site"
+ /db_xref="CDD:239439"
+ misc_feature order(2579..2584,2591..2593,2717..2722,2738..2749,
+ 3152..3157,3167..3169,3173..3178,3221..3226,3236..3238,
+ 3308..3310,3317..3319,3329..3340)
+ /locus_tag="SARI_00002"
+ /note="tetramer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:239439"
+ gene 3757..4899
+ /locus_tag="SARI_00003"
+ CDS 3757..4899
+ /locus_tag="SARI_00003"
+ /inference="protein motif:HMMPanther:IPR004381"
+ /inference="protein motif:HMMPfam:IPR004381"
+ /inference="protein motif:HMMTigr:IPR004381"
+ /inference="similar to AA sequence:INSD:CAD06073.1"
+ /note="'KEGG: stt:t2868 3.3e-188 glycerate kinase K00865;
+ COG: COG1929 Glycerate kinase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569099.1"
+ /db_xref="GI:161501987"
+ /db_xref="InterPro:IPR004381"
+ /translation="MKIVIAPDSYKESLSALEVATAIEQGFREIWPDADYLKLPLADG
+ GEGTVEAMVEATAGRIVHVDVTGPLGRRVNAFYGLSGDARSAFIEMAAASGLEQVPPA
+ LRDPLKTTSWGTGELIRHALDAGVEHIIVGIGGSATNDGGAGMMQALGARLRDAQGND
+ IAQGGIGLETLASIDISGLDKRLSACRIDVACDVTNPLTGKEGASAVFGPQKGATPEM
+ IERLDTALIRYAHLIARELHVDVLDLAGGGAAGGMGAALYAFCGAQLRRGIEIVTDAL
+ HLEERLANADLVITGEGRIDSQTIHGKVPIGVANIAKRHNKPVIGIAGSLTADVGVVH
+ EHGLDAVFSVIYTICTLEEALDNAAENVRMTARNVAATLKIGSLLR"
+ misc_feature 3757..4884
+ /locus_tag="SARI_00003"
+ /note="Glycerate kinase [Carbohydrate transport and
+ metabolism]; Region: COG1929"
+ /db_xref="CDD:224840"
+ gene complement(5009..7765)
+ /locus_tag="SARI_00004"
+ CDS complement(5009..7765)
+ /locus_tag="SARI_00004"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:Gene3D:IPR003594"
+ /inference="protein motif:HMMPfam:IPR001789"
+ /inference="protein motif:HMMPfam:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003660"
+ /inference="protein motif:HMMPfam:IPR003661"
+ /inference="protein motif:HMMPfam:IPR008207"
+ /inference="protein motif:HMMPIR:IPR009184"
+ /inference="protein motif:HMMSmart:IPR001789"
+ /inference="protein motif:HMMSmart:IPR003594"
+ /inference="protein motif:HMMSmart:IPR003660"
+ /inference="protein motif:HMMSmart:IPR003661"
+ /inference="protein motif:HMMSmart:IPR008207"
+ /inference="protein motif:superfamily:IPR003594"
+ /inference="protein motif:superfamily:IPR008207"
+ /inference="protein motif:superfamily:IPR009082"
+ /inference="protein motif:superfamily:IPR011006"
+ /note="part of the two-component regulatory system with
+ UvrY; involved in the regulation of carbon metabolism via
+ the csrA/csrB regulatory system"
+ /codon_start=1
+ /transl_table=11
+ /product="hybrid sensory histidine kinase BarA"
+ /protein_id="YP_001569100.1"
+ /db_xref="GI:161501988"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR003594"
+ /db_xref="InterPro:IPR003660"
+ /db_xref="InterPro:IPR003661"
+ /db_xref="InterPro:IPR008207"
+ /db_xref="InterPro:IPR009082"
+ /db_xref="InterPro:IPR009184"
+ /db_xref="InterPro:IPR011006"
+ /translation="MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDA
+ GSSIIEPLAVSSEYGMNLQNRESIGQLISVLHRRHSDIVRAISVYDDHNRLFVTSNFH
+ LDPSQMQLPAGAPFPRHLSVDRHGDIMILRTPIISESYSPDESAIADAKNTKNMLGYV
+ ALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRR
+ GQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQN
+ VELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELNPTQRDHLNTI
+ ERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRNTLDEVVTLLAHSSHDKGLELTL
+ NIKNDVPDNVIGDPLRLQQVITNLVGNAIKFTESGNIDILVEKRALSNTKVQIEVQIR
+ DTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNR
+ GSTFWFHINLDLNPNVIIDGPSTACLAGKRLAYVEPNATAAQCTLDLLSDTPVEVVYS
+ PTFSALPLAHYDIMILSVPVTFREPLTMQHERLAKAASMTDFLLLALPCHAQINAEKL
+ KQGGAAACLLKPLTSTRLLPALTEYCQLNHHPEPLLMDASKIAMTVMAVDDNPANLKL
+ IGALLEDKVQHVELCDSGHQAVDRAKQMQFDLILMDIQMPDMDGIRACELIHQLPHQQ
+ QTPVIAVTAHAMAGQKEKLLSAGMNDYLAKPIEEEKLHNLLLRYKPGANVAARLMAPE
+ PAEFIFNPNATLDWQLALRQAAGKPDLARDMLQMLIDFLPEVRNKIEEQLVGENPNGL
+ VDLVHKLHGSCGYSGVPRMKNLCQLIEQQLRSGVHEEELEPEFLELLDEMDNVAREAK
+ KILG"
+ misc_feature complement(5012..7765)
+ /locus_tag="SARI_00004"
+ /note="hybrid sensory histidine kinase BarA; Provisional;
+ Region: PRK11107"
+ /db_xref="CDD:236848"
+ misc_feature complement(7232..7675)
+ /locus_tag="SARI_00004"
+ /note="Uncharacterized signal transduction histidine
+ kinase domain (DUF2222); Region: DUF2222; pfam09984"
+ /db_xref="CDD:220502"
+ misc_feature complement(7025..7162)
+ /locus_tag="SARI_00004"
+ /note="Histidine kinase, Adenylyl cyclase,
+ Methyl-accepting protein, and Phosphatase (HAMP) domain.
+ HAMP is a signaling domain which occurs in a wide variety
+ of signaling proteins, many of which are bacterial. The
+ HAMP domain consists of two alpha helices...; Region:
+ HAMP; cd06225"
+ /db_xref="CDD:100122"
+ misc_feature complement(order(7025..7030,7037..7042,7046..7051,
+ 7058..7063,7067..7072,7118..7120,7124..7129,7136..7141,
+ 7145..7150,7157..7162))
+ /locus_tag="SARI_00004"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:100122"
+ misc_feature complement(6707..6895)
+ /locus_tag="SARI_00004"
+ /note="Histidine Kinase A (dimerization/phosphoacceptor)
+ domain; Histidine Kinase A dimers are formed through
+ parallel association of 2 domains creating 4-helix
+ bundles; usually these domains contain a conserved His
+ residue and are activated via...; Region: HisKA; cd00082"
+ /db_xref="CDD:119399"
+ misc_feature complement(order(6722..6724,6734..6736,6743..6745,
+ 6755..6757,6764..6766,6776..6778,6824..6826,6833..6835,
+ 6845..6847,6854..6856,6866..6868,6878..6880))
+ /locus_tag="SARI_00004"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119399"
+ misc_feature complement(6860..6862)
+ /locus_tag="SARI_00004"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:119399"
+ misc_feature complement(6218..6541)
+ /locus_tag="SARI_00004"
+ /note="Histidine kinase-like ATPases; This family includes
+ several ATP-binding proteins for example: histidine
+ kinase, DNA gyrase B, topoisomerases, heat shock protein
+ HSP90, phytochrome-like ATPases and DNA mismatch repair
+ proteins; Region: HATPase_c; cd00075"
+ /db_xref="CDD:238030"
+ misc_feature complement(order(6230..6232,6236..6241,6254..6256,
+ 6260..6262,6308..6319,6398..6403,6407..6409,6413..6415,
+ 6419..6421,6500..6502,6509..6511,6521..6523))
+ /locus_tag="SARI_00004"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature complement(6509..6511)
+ /locus_tag="SARI_00004"
+ /note="Mg2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature complement(order(6311..6313,6317..6319,6401..6403,
+ 6407..6409))
+ /locus_tag="SARI_00004"
+ /note="G-X-G motif; other site"
+ /db_xref="CDD:238030"
+ misc_feature complement(5774..6190)
+ /locus_tag="SARI_00004"
+ /note="Uncharacterized domain of BarA-like signal
+ transduction histidine kinases [Signal transduction
+ mechanisms]; Region: COG4999"
+ /db_xref="CDD:227332"
+ misc_feature complement(5414..5749)
+ /locus_tag="SARI_00004"
+ /note="Signal receiver domain; originally thought to be
+ unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
+ recently identified in eukaroytes ETR1 Arabidopsis
+ thaliana; this domain receives the signal from the sensor
+ partner in a two-component systems; Region: REC; cd00156"
+ /db_xref="CDD:238088"
+ misc_feature complement(order(5453..5458,5465..5467,5522..5524,
+ 5588..5590,5612..5614,5741..5746))
+ /locus_tag="SARI_00004"
+ /note="active site"
+ /db_xref="CDD:238088"
+ misc_feature complement(5612..5614)
+ /locus_tag="SARI_00004"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238088"
+ misc_feature complement(order(5588..5596,5600..5605))
+ /locus_tag="SARI_00004"
+ /note="intermolecular recognition site; other site"
+ /db_xref="CDD:238088"
+ misc_feature complement(5450..5458)
+ /locus_tag="SARI_00004"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238088"
+ misc_feature complement(<5093..5302)
+ /locus_tag="SARI_00004"
+ /note="Histidine Phosphotransfer domain, involved in
+ signalling through a two part component systems in which
+ an autophosphorylating histidine protein kinase serves as
+ a phosphoryl donor to a response regulator protein; the
+ response regulator protein is...; Region: HPT; cd00088"
+ /db_xref="CDD:238041"
+ misc_feature complement(order(5117..5119,5126..5128,5171..5176,
+ 5183..5185))
+ /locus_tag="SARI_00004"
+ /note="putative binding surface; other site"
+ /db_xref="CDD:238041"
+ misc_feature complement(5183..5185)
+ /locus_tag="SARI_00004"
+ /note="active site"
+ /db_xref="CDD:238041"
+ gene 7823..9118
+ /gene="rumA"
+ /locus_tag="SARI_00005"
+ CDS 7823..9118
+ /gene="rumA"
+ /locus_tag="SARI_00005"
+ /inference="protein motif:HMMPfam:IPR002792"
+ /inference="protein motif:HMMPfam:IPR010280"
+ /inference="protein motif:HMMTigr:IPR001566"
+ /inference="protein motif:ScanRegExp:IPR010280"
+ /inference="similar to AA sequence:SwissProt:Q5PEJ4"
+ /note="in Escherichia coli this enzyme catalyzes the
+ SAM-dependent methylation of U1939 in the 23S ribomal RNA;
+ binds an iron-sulfur cluster [4Fe-4S]"
+ /codon_start=1
+ /transl_table=11
+ /product="23S rRNA 5-methyluridine methyltransferase"
+ /protein_id="YP_001569101.1"
+ /db_xref="GI:161501989"
+ /db_xref="InterPro:IPR001566"
+ /db_xref="InterPro:IPR002792"
+ /db_xref="InterPro:IPR010280"
+ /translation="MAQFYSAKRRVTTRQIITVKVNDLDPFGQGVARHNGKALFIPGL
+ LPEESAEVIITEDKKQFSRARVLRRLNDSPERETPRCPHFGVCGGCQQQHIGIALQQR
+ SKSAALARLMKHEVNDIIAGAPWGYRRRARLSLNCLSDKTLQMGFRKAGSNDIVNVEQ
+ CPILAPQLEALLPRIRACLTSLHGTRHLGHVELVQAGNGTLMILRHTAPLSAADKEKL
+ ERFSHSEGLSLFLAPFSEILESVTGETPWYDSHGLRLAFSPRDFIQVNEAVNQQMVAR
+ ALEWLDVRAEDRVLDLFCGMGNFTLPLATSAASVVGVEGVPALVEKGRENAIRNGLHN
+ VTFFHENLEEDVTKQPWAKNGFDKVLLDPARAGATGVMRHIIKLKPIRVVYVSCNPAT
+ LARDSEALVNAGYEATRLAMLDMFPHTGHLESMVLFVRM"
+ misc_feature 7826..9112
+ /gene="rumA"
+ /locus_tag="SARI_00005"
+ /note="23S rRNA m(5)U1939 methyltransferase; Reviewed;
+ Region: rumA; PRK13168"
+ /db_xref="CDD:237291"
+ misc_feature 7850..8023
+ /gene="rumA"
+ /locus_tag="SARI_00005"
+ /note="TRAM domain; Region: TRAM; pfam01938"
+ /db_xref="CDD:110897"
+ misc_feature 8684..8986
+ /gene="rumA"
+ /locus_tag="SARI_00005"
+ /note="S-adenosylmethionine-dependent methyltransferases
+ (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
+ that use S-adenosyl-L-methionine (SAM or AdoMet) as a
+ substrate for methyltransfer, creating the product
+ S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
+ cd02440"
+ /db_xref="CDD:100107"
+ misc_feature order(8696..8716,8762..8767,8840..8848,8906..8908)
+ /gene="rumA"
+ /locus_tag="SARI_00005"
+ /note="S-adenosylmethionine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:100107"
+ gene 9170..11404
+ /gene="relA"
+ /locus_tag="SARI_00006"
+ CDS 9170..11404
+ /gene="relA"
+ /locus_tag="SARI_00006"
+ /inference="protein motif:Gene3D:IPR012675"
+ /inference="protein motif:HMMPfam:IPR002912"
+ /inference="protein motif:HMMPfam:IPR004095"
+ /inference="protein motif:HMMPfam:IPR007685"
+ /inference="protein motif:HMMTigr:IPR004811"
+ /inference="protein motif:superfamily:IPR008921"
+ /inference="protein motif:superfamily:IPR012676"
+ /note="(p)ppGpp synthetase; catalyzes the formation of
+ pppGpp and ppGpp from ATP and GTP or GDP"
+ /codon_start=1
+ /transl_table=11
+ /product="GDP/GTP pyrophosphokinase"
+ /protein_id="YP_001569102.1"
+ /db_xref="GI:161501990"
+ /db_xref="InterPro:IPR002912"
+ /db_xref="InterPro:IPR004095"
+ /db_xref="InterPro:IPR004811"
+ /db_xref="InterPro:IPR007685"
+ /db_xref="InterPro:IPR008921"
+ /db_xref="InterPro:IPR012675"
+ /db_xref="InterPro:IPR012676"
+ /translation="MVAVRSAHINKAGEFDPKKWIASLGISSQQSCERLAETWAYCLQ
+ QTQGHPDADLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKS
+ IVTLIHGVRDMAAIRQLNATHNDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHL
+ REVKEAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLL
+ HERRIDREHYIEEFVGHLRAEMKNEGVLAEVYGRPKHIYSIWRKMQKKHLAFDELFDV
+ RAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTV
+ EIQIRTKQMHEDAELGVAAHWKYKEGAASGGVRSGHEDRIAWLRKLIAWQEEMADSGE
+ MLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVP
+ FTYQLQMGDQVEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAG
+ RQILDDELAHLGISLKEAEKHLLPRYNFNELEELLAAIGGGDIRLNQMVNFLQSQFNK
+ PSAEEQDAAALKQLQQKTYAPQNRRKDDGRVVVEGVGNLMHHIARCCQPIPGDEIVGF
+ ITQGRGISVHRADCEQLAELRSHAPERIVEAVWGESYSAGYSLVVRVTANDRSGLLRD
+ ITTILANEKVNVLGVASRSDIKQQIATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARR
+ LHGN"
+ misc_feature 9170..11398
+ /gene="relA"
+ /locus_tag="SARI_00006"
+ /note="(p)ppGpp synthetase I/GTP pyrophosphokinase;
+ Provisional; Region: relA; PRK10872"
+ /db_xref="CDD:182797"
+ misc_feature 9344..9745
+ /gene="relA"
+ /locus_tag="SARI_00006"
+ /note="HD domain; Region: HD_4; pfam13328"
+ /db_xref="CDD:222047"
+ misc_feature 9848..10216
+ /gene="relA"
+ /locus_tag="SARI_00006"
+ /note="Nucleotidyltransferase (NT) domain of RelA- and
+ SpoT-like ppGpp synthetases and hydrolases; Region:
+ NT_Rel-Spo_like; cd05399"
+ /db_xref="CDD:143389"
+ misc_feature order(9923..9925,9929..9931,9992..9997,10007..10009,
+ 10091..10093,10097..10099,10112..10114,10118..10120,
+ 10124..10126,10136..10138,10172..10174,10178..10180,
+ 10184..10186,10208..10213)
+ /gene="relA"
+ /locus_tag="SARI_00006"
+ /note="synthetase active site [active]"
+ /db_xref="CDD:143389"
+ misc_feature order(9923..9925,10091..10093,10097..10099,10112..10114,
+ 10118..10120,10124..10126,10136..10138,10172..10174,
+ 10178..10180,10208..10210)
+ /gene="relA"
+ /locus_tag="SARI_00006"
+ /note="NTP binding site [chemical binding]; other site"
+ /db_xref="CDD:143389"
+ misc_feature order(9992..9994,10172..10174)
+ /gene="relA"
+ /locus_tag="SARI_00006"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:143389"
+ misc_feature 10385..10564
+ /gene="relA"
+ /locus_tag="SARI_00006"
+ /note="TGS_RelA_SpoT: The RelA (SpoT) protein, also
+ referred to as ppGpp hydrolase/synthetase, is a
+ ribosome-associated protein that is activated during amino
+ acid starvation and thought to mediate the stringent
+ response. RelA contains a TGS domain, named after...;
+ Region: TGS_RelA_SpoT; cd01668"
+ /db_xref="CDD:133438"
+ misc_feature 11174..11389
+ /gene="relA"
+ /locus_tag="SARI_00006"
+ /note="ACT domain found C-terminal of the RelA/SpoT
+ domains; Region: ACT_RelA-SpoT; cd04876"
+ /db_xref="CDD:153148"
+ gene 11437..12270
+ /gene="mazG"
+ /locus_tag="SARI_00007"
+ CDS 11437..12270
+ /gene="mazG"
+ /locus_tag="SARI_00007"
+ /inference="protein motif:HMMPfam:IPR004518"
+ /inference="protein motif:HMMPIR:IPR012199"
+ /inference="protein motif:HMMPIR:IPR012231"
+ /inference="protein motif:HMMTigr:IPR011551"
+ /inference="protein motif:superfamily:IPR011029"
+ /inference="similar to AA sequence:REFSEQ:YP_151973.1"
+ /note="functions in degradation of stringent response
+ intracellular messenger ppGpp; in Escherichia coli this
+ gene is co-transcribed with the toxin/antitoxin genes
+ mazEF; activity of MazG is inhibited by MazEF in vitro;
+ ppGpp inhibits mazEF expression; MazG thus works in
+ limiting the toxic activity of the MazF toxin induced
+ during starvation; MazG also interacts with the GTPase
+ protein Era"
+ /codon_start=1
+ /transl_table=11
+ /product="nucleoside triphosphate pyrophosphohydrolase"
+ /protein_id="YP_001569103.1"
+ /db_xref="GI:161501991"
+ /db_xref="InterPro:IPR004518"
+ /db_xref="InterPro:IPR011029"
+ /db_xref="InterPro:IPR011551"
+ /db_xref="InterPro:IPR012199"
+ /db_xref="InterPro:IPR012231"
+ /translation="MALYSSGLRFQDILMNQIDRLLNIMQRLRDPEGGCPWDKEQTFA
+ SIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGLFDFNDICAAI
+ SDKLERRHPHVFGALSAENSEEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQ
+ KIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVIDQAKLEEEMGDLLFATVNM
+ ARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEID
+ L"
+ misc_feature 11479..12264
+ /gene="mazG"
+ /locus_tag="SARI_00007"
+ /note="nucleoside triphosphate pyrophosphohydrolase;
+ Reviewed; Region: mazG; PRK09562"
+ /db_xref="CDD:236569"
+ misc_feature 11491..11835
+ /gene="mazG"
+ /locus_tag="SARI_00007"
+ /note="Nucleoside Triphosphate Pyrophosphohydrolase (EC
+ 3.6.1.8) N-terminal tandem-domain of MazG proteins from
+ Escherichia coli and bacterial homologs; Region:
+ NTP-PPase_MazG_Nterm; cd11528"
+ /db_xref="CDD:212135"
+ misc_feature order(11494..11499,11506..11508,11563..11568,11575..11577,
+ 11584..11589,11596..11601,11608..11610,11617..11619,
+ 11632..11634,11641..11646,11653..11670,11674..11676,
+ 11683..11685,11710..11712,11719..11733,11737..11745,
+ 11749..11754)
+ /gene="mazG"
+ /locus_tag="SARI_00007"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:212135"
+ misc_feature order(11593..11595,11602..11604,11650..11652,11659..11661)
+ /gene="mazG"
+ /locus_tag="SARI_00007"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:212135"
+ misc_feature 11896..12249
+ /gene="mazG"
+ /locus_tag="SARI_00007"
+ /note="Nucleoside Triphosphate Pyrophosphohydrolase (EC
+ 3.6.1.8) C-terminal tandem-domain of MazG proteins from
+ Escherichia coli and bacterial homologs' Region:
+ NTP-PPase_MazG_Cterm; cd11529"
+ /db_xref="CDD:212136"
+ misc_feature order(11896..11904,11908..11913,11920..11922,11932..11934,
+ 11941..11949,11983..11988,12004..12009,12046..12054,
+ 12058..12066,12070..12075,12079..12081,12100..12108,
+ 12115..12117,12121..12150,12157..12162,12169..12171,
+ 12214..12216,12223..12225,12235..12237)
+ /gene="mazG"
+ /locus_tag="SARI_00007"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:212136"
+ misc_feature order(11947..11955,11980..11982,11992..11994,12001..12003,
+ 12043..12045,12052..12057,12064..12066)
+ /gene="mazG"
+ /locus_tag="SARI_00007"
+ /note="active site"
+ /db_xref="CDD:212136"
+ misc_feature order(11989..11994,12001..12003,12052..12057,12064..12066)
+ /gene="mazG"
+ /locus_tag="SARI_00007"
+ /note="putative chemical substrate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:212136"
+ misc_feature order(11992..11994,12001..12003,12055..12057,12064..12066)
+ /gene="mazG"
+ /locus_tag="SARI_00007"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:212136"
+ gene 12498..14135
+ /gene="pyrG"
+ /locus_tag="SARI_00008"
+ CDS 12498..14135
+ /gene="pyrG"
+ /locus_tag="SARI_00008"
+ /inference="protein motif:HMMPanther:IPR004468"
+ /inference="protein motif:HMMPfam:IPR000991"
+ /inference="protein motif:HMMPfam:IPR004468"
+ /inference="protein motif:HMMTigr:IPR004468"
+ /inference="protein motif:ScanRegExp:IPR012998"
+ /inference="similar to AA sequence:REFSEQ:YP_151972.1"
+ /note="CTP synthase; cytidine triphosphate synthetase;
+ catalyzes the ATP-dependent amination of UTP to CTP with
+ either L-glutamine or ammonia as the source of nitrogen;
+ in Escherichia coli this enzyme forms a homotetramer"
+ /codon_start=1
+ /transl_table=11
+ /product="CTP synthetase"
+ /protein_id="YP_001569104.1"
+ /db_xref="GI:161501992"
+ /db_xref="InterPro:IPR000991"
+ /db_xref="InterPro:IPR004468"
+ /db_xref="InterPro:IPR012998"
+ /translation="MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPY
+ INVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRK
+ ERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQM
+ AVEIGREHTLFMHLTLVPYMAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPA
+ NERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEW
+ EQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVE
+ TRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARN
+ VAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLND
+ DSLVRQLYGAPTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPW
+ FVACQFHPEFTSTPRDGHPLFAGFVKAASEHQKRQAK"
+ misc_feature 12504..14126
+ /gene="pyrG"
+ /locus_tag="SARI_00008"
+ /note="CTP synthetase; Validated; Region: pyrG; PRK05380"
+ /db_xref="CDD:235437"
+ misc_feature 12510..13265
+ /gene="pyrG"
+ /locus_tag="SARI_00008"
+ /note="CTP synthetase (CTPs) is a two-domain protein,
+ which consists of an N-terminal synthetase domain and
+ C-terminal glutaminase domain. The enzymes hydrolyze the
+ amide bond of glutamine to ammonia and glutamate at the
+ glutaminase domains and transfer nascent...; Region: CTGs;
+ cd03113"
+ /db_xref="CDD:239387"
+ misc_feature order(12537..12539,12546..12557,12615..12617,12621..12629,
+ 12705..12707,12711..12713,12720..12725,12915..12917,
+ 12921..12923)
+ /gene="pyrG"
+ /locus_tag="SARI_00008"
+ /note="Catalytic site [active]"
+ /db_xref="CDD:239387"
+ misc_feature order(12540..12554,12615..12617,12924..12926,13056..13064,
+ 13164..13166)
+ /gene="pyrG"
+ /locus_tag="SARI_00008"
+ /note="active site"
+ /db_xref="CDD:239387"
+ misc_feature order(12615..12629,12921..12926,12942..12944,13056..13064,
+ 13164..13166)
+ /gene="pyrG"
+ /locus_tag="SARI_00008"
+ /note="UTP binding site [chemical binding]; other site"
+ /db_xref="CDD:239387"
+ misc_feature 13365..14096
+ /gene="pyrG"
+ /locus_tag="SARI_00008"
+ /note="Type 1 glutamine amidotransferase (GATase1) domain
+ found in Cytidine Triphosphate Synthetase; Region:
+ GATase1_CTP_Synthase; cd01746"
+ /db_xref="CDD:153217"
+ misc_feature order(13545..13559,13632..13637,13644..13646,13704..13706,
+ 13899..13910,14040..14042,14046..14048)
+ /gene="pyrG"
+ /locus_tag="SARI_00008"
+ /note="active site"
+ /db_xref="CDD:153217"
+ misc_feature order(13551..13553,13635..13637)
+ /gene="pyrG"
+ /locus_tag="SARI_00008"
+ /note="putative oxyanion hole; other site"
+ /db_xref="CDD:153217"
+ misc_feature order(13632..13634,14040..14042,14046..14048)
+ /gene="pyrG"
+ /locus_tag="SARI_00008"
+ /note="catalytic triad [active]"
+ /db_xref="CDD:153217"
+ gene 14218..15516
+ /gene="eno"
+ /locus_tag="SARI_00009"
+ CDS 14218..15516
+ /gene="eno"
+ /locus_tag="SARI_00009"
+ /inference="protein motif:BlastProDom:IPR000941"
+ /inference="protein motif:FPrintScan:IPR000941"
+ /inference="protein motif:HMMPanther:IPR000941"
+ /inference="protein motif:HMMPfam:IPR000941"
+ /inference="protein motif:HMMTigr:IPR000941"
+ /inference="protein motif:ScanRegExp:IPR000941"
+ /inference="similar to AA sequence:INSD:AAX66792.1"
+ /note="enolase; catalyzes the formation of
+ phosphoenolpyruvate from 2-phospho-D-glycerate in
+ glycolysis"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphopyruvate hydratase"
+ /protein_id="YP_001569105.1"
+ /db_xref="GI:161501993"
+ /db_xref="InterPro:IPR000941"
+ /translation="MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTG
+ SREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTEN
+ KSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHA
+ DNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGS
+ NAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHF
+ LEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKG
+ IANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQI
+ KTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA"
+ misc_feature 14218..15513
+ /gene="eno"
+ /locus_tag="SARI_00009"
+ /note="enolase; Provisional; Region: eno; PRK00077"
+ /db_xref="CDD:234617"
+ misc_feature 14233..15459
+ /gene="eno"
+ /locus_tag="SARI_00009"
+ /note="Enolase: Enolases are homodimeric enzymes that
+ catalyse the reversible dehydration of
+ 2-phospho-D-glycerate to phosphoenolpyruvate as part of
+ the glycolytic and gluconeogenesis pathways. The reaction
+ is facilitated by the presence of metal ions; Region:
+ enolase; cd03313"
+ /db_xref="CDD:239429"
+ misc_feature order(14239..14241,14245..14271,14281..14283,14317..14319,
+ 14695..14703,14764..14769,14776..14781,14788..14793,
+ 14830..14835,14854..14856,14860..14862,15337..15345,
+ 15412..15420,15424..15429,15436..15438,15445..15450,
+ 15457..15459)
+ /gene="eno"
+ /locus_tag="SARI_00009"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:239429"
+ misc_feature order(14341..14343,14953..14955,15085..15087,15166..15168)
+ /gene="eno"
+ /locus_tag="SARI_00009"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:239429"
+ misc_feature order(14692..14694,14842..14844,15241..15243,15325..15333,
+ 15394..15396)
+ /gene="eno"
+ /locus_tag="SARI_00009"
+ /note="substrate binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:239429"
+ gene 15649..16842
+ /locus_tag="SARI_00010"
+ CDS 15649..16842
+ /locus_tag="SARI_00010"
+ /inference="protein motif:HMMPfam:IPR002559"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:REFSEQ:YP_540438.1"
+ /note="'COG: NOG04673 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569106.1"
+ /db_xref="GI:161501994"
+ /db_xref="InterPro:IPR002559"
+ /db_xref="InterPro:IPR012337"
+ /translation="MPARQVCQNFFRDALAPLHKYRQNALLDATIALINGASLTLTSI
+ GRYLPGTAQVKNKIKRVDRLRGNESLHRNIPLIFRNIIAMLTSQLSLCVIAVDWSGYP
+ SQEHHVLRASLICDGRSIPLLRWIVPSEKQQNAKVQQAFLNTLAEAVNPEARVIIVTD
+ AGFQNAWFRHIESLGWDFIGRIRGNIQMRLEAKGEYWFRRQELQASSKPEYLGPGTLA
+ RSEYARCDGHFYLHKKEPKGRKNKRSRCGIARPSQLKDASPAAKEPWLIFSSTDDFKP
+ RVIMKLYSRRMQIEQHFRDEKSERFGFGLRASYSRSAGRVLALRLLATLSTIVLWLVG
+ YHAENKGLHLRYQANSVRIWRVITYLTLAENVLRQSPLILKRTVLRTVLNHLARIYQN
+ MVLVY"
+ misc_feature <16069..16626
+ /locus_tag="SARI_00010"
+ /note="Transposase DDE domain; Region: DDE_Tnp_1;
+ pfam01609"
+ /db_xref="CDD:216602"
+ gene 16852..16989
+ /locus_tag="SARI_00011"
+ CDS 16852..16989
+ /locus_tag="SARI_00011"
+ /inference="similar to AA sequence:REFSEQ:YP_217872.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569107.1"
+ /db_xref="GI:161501995"
+ /translation="MGIPQRFGGVFCICSIAQPLHMTGQTKSAIINDYHLNRERYAVP
+ D"
+ gene 16973..17644
+ /locus_tag="SARI_00012"
+ CDS 16973..17644
+ /locus_tag="SARI_00012"
+ /inference="similar to AA sequence:REFSEQ:NP_457340.1"
+ /note="'KEGG: hpa:HPAG1_0914 8.5e-06 hypothetical protein
+ K04071;
+ COG: COG0602 Organic radical activating enzymes;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569108.1"
+ /db_xref="GI:161501996"
+ /translation="MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTW
+ DKLSDREVSLYSILAKTKESDKWGAASSEDLLTVINRQDYTARHVVITGGEPCIHDLM
+ PLTDLLEKSGFSSQIETSGTHEVLCTPNTWVTVSPKVNMRGGYDVLTQALERANEIKH
+ PVGRIRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHK
+ YLNIA"
+ misc_feature 16973..17641
+ /locus_tag="SARI_00012"
+ /note="Organic radical activating enzymes
+ [Posttranslational modification, protein turnover,
+ chaperones]; Region: NrdG; COG0602"
+ /db_xref="CDD:223675"
+ misc_feature 16997..17641
+ /locus_tag="SARI_00012"
+ /note="putative 7-cyano-7-deazaguanosine (preQ0)
+ biosynthesis protein QueE; Region: rSAM_QueE_Ecoli;
+ TIGR04322"
+ /db_xref="CDD:213935"
+ gene complement(17943..18305)
+ /locus_tag="SARI_00013"
+ CDS complement(17943..18305)
+ /locus_tag="SARI_00013"
+ /inference="protein motif:BlastProDom:IPR007115"
+ /inference="protein motif:HMMPanther:IPR007115"
+ /inference="protein motif:HMMPfam:IPR007115"
+ /inference="protein motif:HMMPIR:IPR007115"
+ /inference="protein motif:HMMTigr:IPR007116"
+ /inference="similar to AA sequence:REFSEQ:NP_457338.1"
+ /note="'KEGG: sty:STY3077 4.5e-65
+ 6-pyruvoyltetrahydropterin synthase K01737;
+ COG: COG0720 6-pyruvoyl-tetrahydropterin synthase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569109.1"
+ /db_xref="GI:161501997"
+ /db_xref="InterPro:IPR007115"
+ /db_xref="InterPro:IPR007116"
+ /translation="MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEV
+ DPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLL
+ SAVMVKETCTAGCVYRGE"
+ misc_feature complement(17946..18302)
+ /locus_tag="SARI_00013"
+ /note="Tunnelling fold (T-fold). The five known T-folds
+ are found in five different enzymes with different
+ functions: dihydroneopterin-triphosphate epimerase
+ (DHNTPE), dihydroneopterin aldolase (DHNA) , GTP
+ cyclohydrolase I (GTPCH-1), 6-pyrovoyl...; Region: TFold;
+ cl00263"
+ /db_xref="CDD:241736"
+ misc_feature complement(order(17961..17963,17979..17981,18210..18212,
+ 18216..18218))
+ /locus_tag="SARI_00013"
+ /note="active site"
+ /db_xref="CDD:238351"
+ gene 18795..20594
+ /gene="cysJ"
+ /locus_tag="SARI_00014"
+ CDS 18795..20594
+ /gene="cysJ"
+ /locus_tag="SARI_00014"
+ /inference="protein motif:FPrintScan:IPR001094"
+ /inference="protein motif:FPrintScan:IPR001709"
+ /inference="protein motif:HMMPfam:IPR001433"
+ /inference="protein motif:HMMPfam:IPR003097"
+ /inference="protein motif:HMMPfam:IPR008254"
+ /inference="protein motif:HMMTigr:IPR010199"
+ /inference="similar to AA sequence:SwissProt:Q57KH7"
+ /note="catalyzes the reduction of sulfite to sulfide in
+ the biosynthesis of L-cysteine from sulfate; a
+ flavoprotein with flavin reductase activity"
+ /codon_start=1
+ /transl_table=11
+ /product="sulfite reductase subunit alpha"
+ /protein_id="YP_001569110.1"
+ /db_xref="GI:161501998"
+ /db_xref="InterPro:IPR001094"
+ /db_xref="InterPro:IPR001433"
+ /db_xref="InterPro:IPR001709"
+ /db_xref="InterPro:IPR003097"
+ /db_xref="InterPro:IPR008254"
+ /db_xref="InterPro:IPR010199"
+ /translation="MTTQAPLTGLLPLNPQQLARLQAATTDFTPEQLAWVSGYFWGVL
+ NPRSGADAVARAPERGSLGITLISASQTGNARRVAEALRDDLLAVNLNVNLVNAGDYK
+ FKQIACEKLLVVVTSTQGEGEPPEEAVALHKFLFSKKAPRLNNTAFAVFSLGDTSYEF
+ FCQAGKDFDNKLAELGGERLLDRVDADVEYQTVAAQWRARIVDVLKSRTPVTTPVPSV
+ VSGAVNEIHTSPYTKEAPLRASLSVNQKITGRNSEKDVRHIEIDLGDSGLCYQPGDAL
+ GVWYQNDPALVKEIVELLWLKGDEPVAVDGKLLPLTEALQWHFELTVNTAGIVENYAT
+ LTRSEFLLPLVGDKAQLQHYAAATPIADMLRFSPSQLDADALVGLLRPLTPRLYSIAS
+ SQAEVENEVHLTVGVVRYDIEGRARAGGASSFLADRVDDEGEVRVFIEHNDNFRLPTN
+ PETPIIMIGSGTGIAPFRAFIQQRAADEASGKNWLFFGNPHFTEDFLYQVEWQRYVKE
+ GLLSRIDLAWSRDQKEKIYVQDKLRERGAELWRWINDGAHIYVCGDANRMAKDVEQAL
+ LEVIVEFGGMDLESADEYLSELRVARRYQRDVY"
+ misc_feature 18795..20591
+ /gene="cysJ"
+ /locus_tag="SARI_00014"
+ /note="sulfite reductase subunit alpha; Provisional;
+ Region: cysJ; PRK10953"
+ /db_xref="CDD:182862"
+ misc_feature 18990..19385
+ /gene="cysJ"
+ /locus_tag="SARI_00014"
+ /note="Flavodoxin; Region: Flavodoxin_1; pfam00258"
+ /db_xref="CDD:215823"
+ misc_feature 19515..20591
+ /gene="cysJ"
+ /locus_tag="SARI_00014"
+ /note="Cytochrome p450- like alpha subunits of E. coli
+ sulfite reductase (SiR) multimerize with beta subunits to
+ catalyze the NADPH dependent reduction of sulfite to
+ sulfide. Beta subunits have an Fe4S4 cluster and a
+ siroheme, while the alpha subunits (cysJ...; Region: SiR;
+ cd06199"
+ /db_xref="CDD:99796"
+ misc_feature order(19617..19619,19950..19961,20004..20006,20010..20012,
+ 20049..20060)
+ /gene="cysJ"
+ /locus_tag="SARI_00014"
+ /note="FAD binding pocket [chemical binding]; other site"
+ /db_xref="CDD:99796"
+ misc_feature order(19950..19952,19956..19961)
+ /gene="cysJ"
+ /locus_tag="SARI_00014"
+ /note="FAD binding motif [chemical binding]; other site"
+ /db_xref="CDD:99796"
+ misc_feature order(19959..19961,20448..20450,20583..20585,20589..20591)
+ /gene="cysJ"
+ /locus_tag="SARI_00014"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:99796"
+ misc_feature order(20010..20021,20172..20174,20178..20180,20259..20264,
+ 20349..20354,20373..20375,20379..20381,20466..20468)
+ /gene="cysJ"
+ /locus_tag="SARI_00014"
+ /note="NAD binding pocket [chemical binding]; other site"
+ /db_xref="CDD:99796"
+ misc_feature order(20049..20051,20058..20060,20067..20069)
+ /gene="cysJ"
+ /locus_tag="SARI_00014"
+ /note="phosphate binding motif [ion binding]; other site"
+ /db_xref="CDD:99796"
+ misc_feature order(20163..20165,20175..20186,20190..20192)
+ /gene="cysJ"
+ /locus_tag="SARI_00014"
+ /note="beta-alpha-beta structure motif; other site"
+ /db_xref="CDD:99796"
+ gene 20594..22306
+ /locus_tag="SARI_00015"
+ CDS 20594..22306
+ /locus_tag="SARI_00015"
+ /inference="protein motif:HMMPfam:IPR005117"
+ /inference="protein motif:HMMPfam:IPR006067"
+ /inference="protein motif:HMMPIR:IPR008287"
+ /inference="protein motif:HMMTigr:IPR011786"
+ /inference="protein motif:ScanRegExp:IPR006066"
+ /inference="protein motif:superfamily:IPR011255"
+ /inference="similar to AA sequence:SwissProt:P17845"
+ /note="hemoprotein; NADPH dependent; with the alpha
+ subunit (a flavoprotein) catalyzes the reduction of
+ sulfite to sulfide"
+ /codon_start=1
+ /transl_table=11
+ /product="sulfite reductase subunit beta"
+ /protein_id="YP_001569111.1"
+ /db_xref="GI:161501999"
+ /db_xref="InterPro:IPR005117"
+ /db_xref="InterPro:IPR006066"
+ /db_xref="InterPro:IPR006067"
+ /db_xref="InterPro:IPR008287"
+ /db_xref="InterPro:IPR011255"
+ /db_xref="InterPro:IPR011786"
+ /translation="MSEKHPGPLVVEGKLSDAERMKRESNYLRGTIAEDLNDGLTGGF
+ KGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQVIDKF
+ AADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSN
+ PYESQLHSEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKT
+ TVVIPPQNDIDLHANDMSFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGF
+ LPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGITFEPI
+ RPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPGRPLKSGLLEIAKIHQGEFRI
+ TANQNLIVASVPESQKMKVEKLALDYGLMNAVSPQRENSMACVSFPTCPLAMAEAERF
+ LPSFVDKVEAVMAKHGVGNEHIVLRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGN
+ RIGSRIPRMYKENITEPAILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPAR
+ DFWE"
+ misc_feature 20606..22300
+ /locus_tag="SARI_00015"
+ /note="sulfite reductase subunit beta; Provisional;
+ Region: PRK13504"
+ /db_xref="CDD:237402"
+ misc_feature 20837..21013
+ /locus_tag="SARI_00015"
+ /note="Nitrite/Sulfite reductase ferredoxin-like half
+ domain; Region: NIR_SIR_ferr; pfam03460"
+ /db_xref="CDD:217572"
+ misc_feature 21650..21847
+ /locus_tag="SARI_00015"
+ /note="Nitrite/Sulfite reductase ferredoxin-like half
+ domain; Region: NIR_SIR_ferr; pfam03460"
+ /db_xref="CDD:217572"
+ gene 22409..23143
+ /locus_tag="SARI_00016"
+ CDS 22409..23143
+ /locus_tag="SARI_00016"
+ /inference="protein motif:HMMPfam:IPR002500"
+ /inference="protein motif:HMMTigr:IPR004511"
+ /inference="protein motif:HMMTigr:IPR011800"
+ /inference="similar to AA sequence:INSD:"
+ /note="catalyzes the reduction of 3'-phosphoadenylyl
+ sulfate into sulfite"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphoadenosine phosphosulfate reductase"
+ /protein_id="YP_001569112.1"
+ /db_xref="GI:161502000"
+ /db_xref="InterPro:IPR002500"
+ /db_xref="InterPro:IPR004511"
+ /db_xref="InterPro:IPR011800"
+ /translation="MSVLDLNALNDLPKVDRVLALAETNAELEKLVAEERVAWSLENL
+ PGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDALTDKLKLNLK
+ VYRATESAAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALQDLNAQTWFAGLRREQ
+ SGSRTSLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWHQGYLSVGDTHTT
+ RKWEPGMAEEETRFFGLKRECGLHEG"
+ misc_feature 22430..23140
+ /locus_tag="SARI_00016"
+ /note="3'-phosphoadenosine 5'-phosphosulfate
+ sulfotransferase (PAPS reductase)/FAD synthetase and
+ related enzymes [Amino acid transport and metabolism /
+ Coenzyme metabolism]; Region: CysH; COG0175"
+ /db_xref="CDD:223253"
+ misc_feature 22553..23047
+ /locus_tag="SARI_00016"
+ /note="This domain is found in phosphoadenosine
+ phosphosulphate (PAPS) reductase enzymes or PAPS
+ sulphotransferase. PAPS reductase is part of the adenine
+ nucleotide alpha hydrolases superfamily also including N
+ type ATP PPases and ATP sulphurylases. A highly...;
+ Region: PAPS_reductase; cd01713"
+ /db_xref="CDD:238846"
+ misc_feature order(22814..22816,22898..22900,22940..22942)
+ /locus_tag="SARI_00016"
+ /note="Active Sites [active]"
+ /db_xref="CDD:238846"
+ gene complement(23241..24194)
+ /locus_tag="SARI_00017"
+ CDS complement(23241..24194)
+ /locus_tag="SARI_00017"
+ /inference="similar to AA sequence:INSD:AAO70403.1"
+ /note="'COG: NOG25864 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569113.1"
+ /db_xref="GI:161502001"
+ /translation="MPVTLNFGNYQNYTLNESRLAHLLSADKEKATHMGRWDKLQDHF
+ RSEKKDHALEVLHSIIHGQGRGEPGEMDVNVEDMAKIYAFKRLQNLACPAHQDLFKIK
+ MDASQTQFLFIVGDTVISQSKIQDILNISDTVAVESMSREERKLFLQICEMIGSTITC
+ HPELLQASSSTLRKEVTGNTKIKEAVYGMMRPAEAPDHQLVEWQDSLSENEKSTLACI
+ NAGNFDPITQFCKIGYQEIQGEVAFSMIHPCISYLLHTYSPLTEFKGTNAGFLNKLNQ
+ DYKDYHKNKMNIDPILEKIYLAHEHSLHIGKNECSRNILLA"
+ misc_feature complement(23244..24194)
+ /locus_tag="SARI_00017"
+ /note="pathogenicity island 1 effector protein SopD;
+ Provisional; Region: PRK15379"
+ /db_xref="CDD:185277"
+ gene 24531..24716
+ /locus_tag="SARI_00018"
+ CDS 24531..24716
+ /locus_tag="SARI_00018"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569114.1"
+ /db_xref="GI:161502002"
+ /translation="MFKYNFKMCNFFRYLKKALKRREVLSLSTCWSLRVDITIGESPG
+ GEKLTAAMIIIFFVGIV"
+ gene 24740..25495
+ /locus_tag="SARI_00019"
+ CDS 24740..25495
+ /locus_tag="SARI_00019"
+ /inference="similar to AA sequence:INSD:AAL21824.1"
+ /note="'COG: COG1203 Predicted helicases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569115.1"
+ /db_xref="GI:161502003"
+ /translation="MVIDNIYFIDHHLKKLGIKNKEQTAQFFAWILFWHDIGKFAHSF
+ QQLYRHEALNAFNEPTRYYKKIAHPTLGYGLWNSWLSECPELFPPSSLSVRKSKRVMA
+ LWMPVTTGHHGRPPDAIQELDQFRQQDKDAARDFLLRVKALFPSTANVSVFTGIETLF
+ PFIQHPTLLQQKVLELDINMDGAQLFILEDVTGAGKTEAALILVHRLMAAGKAQGLYF
+ GLPTMAVTPFKHNNLRLLGLSNKVLLCSPRQRG"
+ misc_feature 24779..>25174
+ /locus_tag="SARI_00019"
+ /note="CRISPR/Cas system-associated protein
+ Cas3'' Region: Cas3''_I; cd09641"
+ /db_xref="CDD:193608"
+ gene complement(25575..26621)
+ /locus_tag="SARI_00020"
+ CDS complement(25575..26621)
+ /locus_tag="SARI_00020"
+ /inference="protein motif:HMMPfam:IPR007484"
+ /inference="similar to AA sequence:REFSEQ:NP_461857.1"
+ /note="catalyzes the sequential removal of 2
+ amino-terminal arginines from alkaline phosphatase isozyme
+ 1 to form isozymes 2 and 3"
+ /codon_start=1
+ /transl_table=11
+ /product="alkaline phosphatase isozyme conversion
+ aminopeptidase"
+ /protein_id="YP_001569116.1"
+ /db_xref="GI:161502004"
+ /db_xref="InterPro:IPR007484"
+ /translation="MFSATRRFTVILALGVGFIFPAQAASPGPGEIANIQARHIATFF
+ PGRMTGSPAEMLTADYLRQQFARMGYQSDIRTFNSRFIYTTRDNRKNWHNVTGSMVIA
+ AHEGHVPQQIIIMAHLDTYAPQSDADIDANLGGLTLQGMDDNAAGLGVMLELAARLKD
+ IPTHYGIRFIATSGEEEGKLGAENLLKRMSDTEKKNTLLIINLDNLIVGDKLYFNSGK
+ NTPEAVRTLTRERALAIARHYGIAASTNPGLNPAYPKGTGCCNDAEVFDKAGLSVLSV
+ EATNWNLGKKDGYQQRAKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIM
+ LPLVKELAKAEKTP"
+ misc_feature complement(25584..26621)
+ /locus_tag="SARI_00020"
+ /note="alkaline phosphatase isozyme conversion
+ aminopeptidase; Provisional; Region: PRK10199"
+ /db_xref="CDD:182299"
+ misc_feature complement(25620..26513)
+ /locus_tag="SARI_00020"
+ /note="M28 Zn-peptidases include aminopeptidases and
+ carboxypeptidases; Region: M28; cd02690"
+ /db_xref="CDD:193493"
+ misc_feature complement(order(25707..25709,26010..26012,26094..26099,
+ 26193..26195,26271..26273))
+ /locus_tag="SARI_00020"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:193493"
+ gene 26873..27781
+ /locus_tag="SARI_00021"
+ CDS 26873..27781
+ /locus_tag="SARI_00021"
+ /inference="protein motif:HMMPfam:IPR002500"
+ /inference="protein motif:HMMTigr:IPR011784"
+ /inference="similar to AA sequence:SwissProt:P65672"
+ /note="with CysN catalyzes the formation of
+ adenylylsulfate from sulfate and ATP"
+ /codon_start=1
+ /transl_table=11
+ /product="sulfate adenylyltransferase subunit 2"
+ /protein_id="YP_001569117.1"
+ /db_xref="GI:161502005"
+ /db_xref="InterPro:IPR002500"
+ /db_xref="InterPro:IPR011784"
+ /translation="MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVML
+ HLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANTYGCELLVHKNPEGVAMDINP
+ FVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDP
+ KNQRPELWRNYNGQINTGESIRVFPLSNWTEQDIWQYIWLENIEIVPLYLAAERPVLE
+ RDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVST
+ TSERQGRVIDRDQAGSMELKKRQGYF"
+ misc_feature 26897..27778
+ /locus_tag="SARI_00021"
+ /note="sulfate adenylyltransferase, small subunit; Region:
+ CysD; TIGR02039"
+ /db_xref="CDD:131094"
+ misc_feature 26957..27499
+ /locus_tag="SARI_00021"
+ /note="This domain is found in phosphoadenosine
+ phosphosulphate (PAPS) reductase enzymes or PAPS
+ sulphotransferase. PAPS reductase is part of the adenine
+ nucleotide alpha hydrolases superfamily also including N
+ type ATP PPases and ATP sulphurylases. A highly...;
+ Region: PAPS_reductase; cd01713"
+ /db_xref="CDD:238846"
+ misc_feature order(27215..27217,27299..27301,27404..27406,27416..27418)
+ /locus_tag="SARI_00021"
+ /note="Active Sites [active]"
+ /db_xref="CDD:238846"
+ gene 27791..29230
+ /gene="cysN"
+ /locus_tag="SARI_00022"
+ CDS 27791..29230
+ /gene="cysN"
+ /locus_tag="SARI_00022"
+ /inference="protein motif:HMMPfam:IPR000795"
+ /inference="protein motif:HMMPfam:IPR004161"
+ /inference="protein motif:HMMTigr:IPR005225"
+ /inference="protein motif:HMMTigr:IPR011779"
+ /inference="protein motif:ScanRegExp:IPR000795"
+ /inference="protein motif:superfamily:IPR009001"
+ /inference="similar to AA sequence:REFSEQ:NP_461855.1"
+ /note="may be GTPase that regulates ATP sulfurylase
+ activity that is involved in converting ATP and sulfate to
+ diphosphate and adenylylsulfate; in Escherichia coli this
+ enzyme functions in cysteine biosynthesis in the first
+ step; forms a heterodimer with CysD; part of the
+ GTP-binding elongation factor family CysN/NodQ"
+ /codon_start=1
+ /transl_table=11
+ /product="sulfate adenylyltransferase subunit 1"
+ /protein_id="YP_001569118.1"
+ /db_xref="GI:161502006"
+ /db_xref="InterPro:IPR000795"
+ /db_xref="InterPro:IPR004161"
+ /db_xref="InterPro:IPR005225"
+ /db_xref="InterPro:IPR009001"
+ /db_xref="InterPro:IPR011779"
+ /translation="MNTILAQQIAKEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLI
+ GRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYF
+ STEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGI
+ KHLVVAINKMDLVDYREETFARIREDYLTFAERLPGDLDIRFVPLSALEGDNVAAQSA
+ NMRWYSGPTLLEVLETVDIQRVVDRQPMRFPVQYVNRPNLDFRGYVGTLASGSIKVGE
+ RIKVLPSGVESSVSRIVTFDGDREEAYAGEAITLVLNDEIDISRGDLLLAANEALAPA
+ QYAAIDVVWMAEQPLTPGQSYDVKLAGKKTRARVETIRYQIDINNLTQRDVESLPLNG
+ IGLVEMAFDEPLALDIYQQNPVTGGLIFIDRLSNITVGAGMVREPVERGVTPPMEYSA
+ FELELNALVRRHFPHWNARDLLGDKHGAA"
+ misc_feature 27791..29209
+ /gene="cysN"
+ /locus_tag="SARI_00022"
+ /note="sulfate adenylyltransferase subunit 1; Provisional;
+ Region: cysN; PRK05124"
+ /db_xref="CDD:235349"
+ misc_feature 27875..28507
+ /gene="cysN"
+ /locus_tag="SARI_00022"
+ /note="CysN, together with protein CysD, forms the ATP
+ sulfurylase (ATPS) complex; Region: CysN_ATPS; cd04166"
+ /db_xref="CDD:206729"
+ misc_feature order(27875..27877,28076..28081,28085..28087,28091..28093,
+ 28112..28114,28118..28120,28166..28168,28175..28177)
+ /gene="cysN"
+ /locus_tag="SARI_00022"
+ /note="CysD dimerization site [polypeptide binding]; other
+ site"
+ /db_xref="CDD:206729"
+ misc_feature 27890..27913
+ /gene="cysN"
+ /locus_tag="SARI_00022"
+ /note="G1 box; other site"
+ /db_xref="CDD:206729"
+ misc_feature order(27893..27895,27899..27901,27911..27916,27923..27925,
+ 27932..27937,28082..28087,28139..28144,28211..28216,
+ 28334..28336,28346..28348)
+ /gene="cysN"
+ /locus_tag="SARI_00022"
+ /note="putative GEF interaction site [polypeptide
+ binding]; other site"
+ /db_xref="CDD:206729"
+ misc_feature order(27899..27901,27905..27916,28046..28048,28292..28297,
+ 28301..28306,28406..28414)
+ /gene="cysN"
+ /locus_tag="SARI_00022"
+ /note="GTP/Mg2+ binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:206729"
+ misc_feature 28052..28084
+ /gene="cysN"
+ /locus_tag="SARI_00022"
+ /note="Switch I region; other site"
+ /db_xref="CDD:206729"
+ misc_feature 28070..28072
+ /gene="cysN"
+ /locus_tag="SARI_00022"
+ /note="G2 box; other site"
+ /db_xref="CDD:206729"
+ misc_feature 28127..28138
+ /gene="cysN"
+ /locus_tag="SARI_00022"
+ /note="G3 box; other site"
+ /db_xref="CDD:206729"
+ misc_feature 28133..28189
+ /gene="cysN"
+ /locus_tag="SARI_00022"
+ /note="Switch II region; other site"
+ /db_xref="CDD:206729"
+ misc_feature 28292..28303
+ /gene="cysN"
+ /locus_tag="SARI_00022"
+ /note="G4 box; other site"
+ /db_xref="CDD:206729"
+ misc_feature 28406..28414
+ /gene="cysN"
+ /locus_tag="SARI_00022"
+ /note="G5 box; other site"
+ /db_xref="CDD:206729"
+ misc_feature 28529..28756
+ /gene="cysN"
+ /locus_tag="SARI_00022"
+ /note="CysN_NodQ_II: This subfamily represents the domain
+ II of the large subunit of ATP sulfurylase (ATPS): CysN or
+ the N-terminal portion of NodQ, found mainly in
+ proteobacteria and homologous to the domain II of EF-Tu.
+ Escherichia coli ATPS consists of CysN...; Region:
+ CysN_NodQ_II; cd03695"
+ /db_xref="CDD:239666"
+ misc_feature 28808..29092
+ /gene="cysN"
+ /locus_tag="SARI_00022"
+ /note="TCysN_NoDQ_II: This subfamily represents the domain
+ II of the large subunit of ATP sulfurylase (ATPS): CysN or
+ the N-terminal portion of NodQ, found mainly in
+ proteobacteria and homologous to the domain II of EF-Tu.
+ Escherichia coli ATPS consists of CysN...; Region:
+ CysN_NoDQ_III; cd04095"
+ /db_xref="CDD:239762"
+ gene 29217..29822
+ /locus_tag="SARI_00023"
+ CDS 29217..29822
+ /locus_tag="SARI_00023"
+ /inference="protein motif:BlastProDom:IPR002891"
+ /inference="protein motif:HMMPfam:IPR002891"
+ /inference="protein motif:HMMTigr:IPR002891"
+ /inference="similar to AA sequence:REFSEQ:YP_217852.1"
+ /note="converts ATP and adenylyl sulfate to ADP and
+ 3'-phosphoadenylyl sulfate; in Escherichia coli this
+ enzyme functions in cysteine biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="adenylylsulfate kinase"
+ /protein_id="YP_001569119.1"
+ /db_xref="GI:161502007"
+ /db_xref="InterPro:IPR002891"
+ /translation="MALHDENVVWHPHPVTVTAREQLHGHRGVVLWFTGLSGSGKSTV
+ AGALEEALHHRSVSTYLLDGDNVRHGLCRNLGFSDADRKENIRRVGEVASLMADAGLI
+ VLTAFISPHRAERQLVQERVGHDRFIEIYVDTPLAVCEQRDPKGLYKKARAGELRNFT
+ GIDGIYEAPESPQIHLNGEQLVTNLVSQLLDLLRRRDIISS"
+ misc_feature 29304..29747
+ /locus_tag="SARI_00023"
+ /note="Adenosine 5'-phosphosulfate kinase (APSK)
+ catalyzes the phosphorylation of adenosine
+ 5'-phosphosulfate to form 3'-phosphoadenosine
+ 5'-phosphosulfate (PAPS). The end-product PAPS is a
+ biologically "activated" sulfate form...;
+ Region: APSK; cd02027"
+ /db_xref="CDD:238985"
+ misc_feature order(29325..29330,29334..29345,29418..29420,29445..29447,
+ 29460..29462,29469..29471,29538..29546,29640..29642,
+ 29691..29696)
+ /locus_tag="SARI_00023"
+ /note="ligand-binding site [chemical binding]; other site"
+ /db_xref="CDD:238985"
+ gene 29840..30196
+ /locus_tag="SARI_00024"
+ CDS 29840..30196
+ /locus_tag="SARI_00024"
+ /inference="similar to AA sequence:REFSEQ:NP_457321.1"
+ /note="'COG: NOG12170 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569120.1"
+ /db_xref="GI:161502008"
+ /translation="MPGMVKVTGFDMRNSHNITFTRSDAFIVDDDTTSSLPGAVVGFV
+ SWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKLLFSIMFTL
+ LAVGALFGALFIWLLG"
+ misc_feature 29873..30193
+ /locus_tag="SARI_00024"
+ /note="Protein of unknown function (DUF3561); Region:
+ DUF3561; pfam12084"
+ /db_xref="CDD:152519"
+ gene 30387..30698
+ /gene="ftsB"
+ /locus_tag="SARI_00025"
+ CDS 30387..30698
+ /gene="ftsB"
+ /locus_tag="SARI_00025"
+ /inference="protein motif:HMMPfam:IPR007060"
+ /inference="similar to AA sequence:REFSEQ:ZP_00696532.1"
+ /note="forms a complex with FtsL and FtsQ; colocalizes to
+ the septal region of the dividing cell; membrane protein"
+ /codon_start=1
+ /transl_table=11
+ /product="cell division protein FtsB"
+ /protein_id="YP_001569121.1"
+ /db_xref="GI:161502009"
+ /db_xref="InterPro:IPR007060"
+ /translation="MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNA
+ KLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAQTAGQNN
+ R"
+ misc_feature 30387..30695
+ /gene="ftsB"
+ /locus_tag="SARI_00025"
+ /note="cell division protein FtsB; Reviewed; Region: ftsB;
+ PRK00888"
+ /db_xref="CDD:179156"
+ misc_feature <30444..30668
+ /gene="ftsB"
+ /locus_tag="SARI_00025"
+ /note="Septum formation initiator [Cell division and
+ chromosome partitioning]; Region: COG2919"
+ /db_xref="CDD:225471"
+ gene 30717..31427
+ /gene="ispD"
+ /locus_tag="SARI_00026"
+ CDS 30717..31427
+ /gene="ispD"
+ /locus_tag="SARI_00026"
+ /inference="protein motif:HMMPfam:IPR001228"
+ /inference="protein motif:HMMPIR:IPR008233"
+ /inference="protein motif:HMMTigr:IPR001228"
+ /inference="protein motif:ScanRegExp:IPR001228"
+ /inference="similar to AA sequence:REFSEQ:NP_806528.1"
+ /note="4-diphosphocytidyl-2C-methyl-D-erythritol synthase;
+ MEP cytidylyltransferase; MCT; catalyzes the formation of
+ 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and
+ 2-C-methyl-D-erythritol 4-phosphate; involved in
+ isoprenoid and isopentenyl-PP biosynthesis; forms
+ homodimers"
+ /codon_start=1
+ /transl_table=11
+ /product="2-C-methyl-D-erythritol 4-phosphate
+ cytidylyltransferase"
+ /protein_id="YP_001569122.1"
+ /db_xref="GI:161502010"
+ /db_xref="InterPro:IPR001228"
+ /db_xref="InterPro:IPR008233"
+ /translation="MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHA
+ LLAHPRVTRVVIVISPGDHRFAQLPLANHPQITVVDGGNERADSVMAGLQAVAQAKWV
+ LVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKAAIAHTVERADL
+ WHALTPQFFPRELLHDCLTRALKEGATITDEASALEYCGFHPALVEGRADNIKVTRPE
+ DLALAEFYLTRTIHQEKA"
+ misc_feature 30738..31385
+ /gene="ispD"
+ /locus_tag="SARI_00026"
+ /note="CDP-ME synthetase is involved in
+ mevalonate-independent isoprenoid production; Region:
+ CDP-ME_synthetase; cd02516"
+ /db_xref="CDD:133009"
+ misc_feature order(30753..30755,30759..30776,30795..30797,30960..30971,
+ 30978..30980,31032..31040,31353..31355)
+ /gene="ispD"
+ /locus_tag="SARI_00026"
+ /note="substrate binding site; other site"
+ /db_xref="CDD:133009"
+ misc_feature order(31041..31043,31101..31103,31125..31127,31131..31133,
+ 31188..31205,31281..31286,31290..31295,31302..31304,
+ 31317..31328,31338..31343)
+ /gene="ispD"
+ /locus_tag="SARI_00026"
+ /note="dimer interface; other site"
+ /db_xref="CDD:133009"
+ gene 31427..31906
+ /gene="ispF"
+ /locus_tag="SARI_00027"
+ CDS 31427..31906
+ /gene="ispF"
+ /locus_tag="SARI_00027"
+ /inference="protein motif:HMMPfam:IPR003526"
+ /inference="protein motif:HMMPIR:IPR010925"
+ /inference="protein motif:HMMTigr:IPR003526"
+ /inference="protein motif:ScanRegExp:IPR003526"
+ /inference="protein motif:superfamily:IPR003526"
+ /inference="similar to AA sequence:INSD:AAV78640.1"
+ /note="'catalyzes the conversion of
+ 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate
+ into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate'"
+ /codon_start=1
+ /transl_table=11
+ /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
+ synthase"
+ /protein_id="YP_001569123.1"
+ /db_xref="GI:161502011"
+ /db_xref="InterPro:IPR003526"
+ /db_xref="InterPro:IPR010925"
+ /translation="MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHAL
+ TDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYILGNVDVTIIAQA
+ PKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGITCEAVALLMKAAK"
+ misc_feature 31430..31888
+ /gene="ispF"
+ /locus_tag="SARI_00027"
+ /note="MECDP_synthase
+ (2-C-methyl-D-erythritol-2,4-cyclodiphosphate synthase),
+ encoded by the ispF gene, catalyzes the formation of
+ 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (MEC) in the
+ non-mevalonate deoxyxylulose (DOXP) pathway for isoprenoid
+ biosynthesis; Region: MECDP_synthase; cd00554"
+ /db_xref="CDD:100025"
+ misc_feature order(31430..31435,31439..31441,31445..31447,31451..31459,
+ 31469..31471,31574..31576,31580..31585,31589..31594,
+ 31703..31705,31709..31711,31715..31717,31736..31738,
+ 31742..31744,31808..31810,31814..31819,31826..31834,
+ 31871..31873,31877..31879,31883..31885)
+ /gene="ispF"
+ /locus_tag="SARI_00027"
+ /note="homotrimer interaction site [polypeptide binding];
+ other site"
+ /db_xref="CDD:100025"
+ misc_feature order(31448..31450,31454..31456,31550..31552)
+ /gene="ispF"
+ /locus_tag="SARI_00027"
+ /note="zinc binding site [ion binding]; other site"
+ /db_xref="CDD:100025"
+ misc_feature order(31592..31594,31598..31600,31724..31729,31733..31744,
+ 31817..31825)
+ /gene="ispF"
+ /locus_tag="SARI_00027"
+ /note="CDP-binding sites; other site"
+ /db_xref="CDD:100025"
+ gene 31903..32952
+ /gene="truD"
+ /locus_tag="SARI_00028"
+ CDS 31903..32952
+ /gene="truD"
+ /locus_tag="SARI_00028"
+ /inference="protein motif:HMMPfam:IPR001656"
+ /inference="protein motif:HMMTigr:IPR001656"
+ /inference="protein motif:ScanRegExp:IPR001656"
+ /inference="similar to AA sequence:INSD:AAV78639.1"
+ /note="catalyzes the modification of U13 in tRNA(Glu)"
+ /codon_start=1
+ /transl_table=11
+ /product="tRNA pseudouridine synthase D"
+ /protein_id="YP_001569124.1"
+ /db_xref="GI:161502012"
+ /db_xref="InterPro:IPR001656"
+ /translation="MTEFENLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHI
+ LVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFS
+ AFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDSGVPNYF
+ GAQRFGIGGSNLQGALRWAQSDAPVRDRNKRSFWLSAARSALFNQIVSQRLKKTDFNQ
+ VVDGDTLQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGRGEWGTQRDALAFEQ
+ DAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVV
+ RELINTIGDYAHIAE"
+ misc_feature 31903..32922
+ /gene="truD"
+ /locus_tag="SARI_00028"
+ /note="tRNA pseudouridine synthase D; Reviewed; Region:
+ truD; PRK00984"
+ /db_xref="CDD:234884"
+ misc_feature 31954..32682
+ /gene="truD"
+ /locus_tag="SARI_00028"
+ /note="Pseudouridine synthase, similar to Escherichia coli
+ TruD; Region: PseudoU_synth_EcTruD; cd02575"
+ /db_xref="CDD:211340"
+ misc_feature 31981..32001
+ /gene="truD"
+ /locus_tag="SARI_00028"
+ /note="Permutation of conserved domain; other site"
+ /db_xref="CDD:211340"
+ misc_feature 32131..32142
+ /gene="truD"
+ /locus_tag="SARI_00028"
+ /note="active site"
+ /db_xref="CDD:211340"
+ misc_feature <32836..32916
+ /gene="truD"
+ /locus_tag="SARI_00028"
+ /note="Pseudouridine synthases catalyze the isomerization
+ of specific uridines in an RNA molecule to pseudouridines
+ (5-ribosyluracil, psi); Region: PseudoU_synth; cl00130"
+ /db_xref="CDD:241628"
+ gene 32933..33694
+ /gene="surE"
+ /locus_tag="SARI_00029"
+ CDS 32933..33694
+ /gene="surE"
+ /locus_tag="SARI_00029"
+ /inference="protein motif:BlastProDom:IPR002828"
+ /inference="protein motif:HMMPfam:IPR002828"
+ /inference="protein motif:HMMTigr:IPR002828"
+ /inference="similar to AA sequence:SwissProt:P66881"
+ /note="catalyzes the conversion of a phosphate monoester
+ to an alcohol and a phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="stationary phase survival protein SurE"
+ /protein_id="YP_001569125.1"
+ /db_xref="GI:161502013"
+ /db_xref="InterPro:IPR002828"
+ /translation="MRILLSNDDGIHAPGIQTLAKALREFADVQVVAPDRNRSGASNS
+ LTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVI
+ YSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNV
+ PDLPLAQIKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVD
+ EGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW"
+ misc_feature 32933..33667
+ /gene="surE"
+ /locus_tag="SARI_00029"
+ /note="5'(3')-nucleotidase/polyphosphatase;
+ Provisional; Region: surE; PRK00346"
+ /db_xref="CDD:234732"
+ gene 33688..34314
+ /gene="pcm"
+ /locus_tag="SARI_00030"
+ CDS 33688..34314
+ /gene="pcm"
+ /locus_tag="SARI_00030"
+ /inference="protein motif:HMMPanther:IPR000682"
+ /inference="protein motif:HMMPfam:IPR000682"
+ /inference="protein motif:HMMTigr:IPR000682"
+ /inference="protein motif:ScanRegExp:IPR000682"
+ /inference="similar to AA sequence:REFSEQ:NP_461847.1"
+ /note="catalyzes the methyl esterification of
+ L-isoaspartyl residues that are formed in damaged
+ proteins"
+ /codon_start=1
+ /transl_table=11
+ /product="protein-L-isoaspartate O-methyltransferase"
+ /protein_id="YP_001569126.1"
+ /db_xref="GI:161502014"
+ /db_xref="InterPro:IPR000682"
+ /translation="MVSRRVQALLEQLRAQGIRDEQVLDALAAVPREKFIDEAFEHKA
+ WENIALPIGQGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVHHVCS
+ VERIKGLQWQARRRLKQLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPTALMA
+ QLDEGGILVLPVGDEQQFLKRVRRRGGEFIIDTVEAVRFVPLVRGELA"
+ misc_feature 33688..34311
+ /gene="pcm"
+ /locus_tag="SARI_00030"
+ /note="protein-L-isoaspartate O-methyltransferase;
+ Reviewed; Region: pcm; PRK00312"
+ /db_xref="CDD:178974"
+ misc_feature 33919..34203
+ /gene="pcm"
+ /locus_tag="SARI_00030"
+ /note="S-adenosylmethionine-dependent methyltransferases
+ (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
+ that use S-adenosyl-L-methionine (SAM or AdoMet) as a
+ substrate for methyltransfer, creating the product
+ S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
+ cd02440"
+ /db_xref="CDD:100107"
+ misc_feature order(33931..33951,33997..34002,34075..34083,34129..34131)
+ /gene="pcm"
+ /locus_tag="SARI_00030"
+ /note="S-adenosylmethionine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:100107"
+ gene complement(34454..34651)
+ /locus_tag="SARI_00031"
+ CDS complement(34454..34651)
+ /locus_tag="SARI_00031"
+ /inference="similar to AA sequence:REFSEQ:YP_542096.1"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569127.1"
+ /db_xref="GI:161502015"
+ /translation="MINIPELVFDDKPPSTDETGAGGFDELEQPASHSETSDSAAMRL
+ TVNFGLPALIYPPGKNLVNSQ"
+ gene 34491..35612
+ /gene="nlpD"
+ /locus_tag="SARI_00032"
+ CDS 34491..35612
+ /gene="nlpD"
+ /locus_tag="SARI_00032"
+ /inference="protein motif:HMMPfam:IPR002482"
+ /inference="protein motif:HMMPfam:IPR002886"
+ /inference="protein motif:HMMSmart:IPR002482"
+ /inference="protein motif:superfamily:IPR011054"
+ /inference="similar to AA sequence:REFSEQ:YP_217844.1"
+ /note="outer membrane lipoprotein involved in
+ stationary-phase cell survival; similar to LppB virulence
+ determinant from Haemophilus somnus"
+ /codon_start=1
+ /transl_table=11
+ /product="lipoprotein NlpD"
+ /protein_id="YP_001569128.2"
+ /db_xref="GI:448236175"
+ /db_xref="InterPro:IPR002482"
+ /db_xref="InterPro:IPR002886"
+ /db_xref="InterPro:IPR011054"
+ /translation="MSAGSPKFTVSRIAALSLVSLWLAGCSSSSNPPAPVSSVDGGLS
+ SNTNSGMLITPPPKMGATTQQAPQIQPVQRPVTQPVQTQPVAEQPVQMENGRIVYNRQ
+ YGNIPKGSYAGGSTYTVKKGDTLFYIAWITGNDFRDLAQRNSIPAPYSLNVGQILQVG
+ NASGTPITGGNAITQADAAQQGVVTRSAQNSTVAVASQPTITYSEGSGEQSANKMLPN
+ NKPAGTVVTAPVTAPTVSTTEPNASSTSTSAPISAWRWPTDGKVIENFGASEGGNKGI
+ DIAGSKGQAIVATANGRVVYAGNALRGYGNLIIIKHNDDYLSAYAHNDTMLVREQQEV
+ KAGQKIATMGSTGTSSTRLHFEIRYKGKSVNPLRYLPQR"
+ misc_feature 34491..35609
+ /gene="nlpD"
+ /locus_tag="SARI_00032"
+ /note="lipoprotein NlpD; Provisional; Region: nlpD;
+ PRK10871"
+ /db_xref="CDD:236782"
+ misc_feature 34836..34967
+ /gene="nlpD"
+ /locus_tag="SARI_00032"
+ /note="Lysine Motif is a small domain involved in binding
+ peptidoglycan; Region: LysM; cd00118"
+ /db_xref="CDD:212030"
+ misc_feature 35301..35588
+ /gene="nlpD"
+ /locus_tag="SARI_00032"
+ /note="Peptidase family M23; Region: Peptidase_M23;
+ pfam01551"
+ /db_xref="CDD:216566"
+ gene 35676..36668
+ /locus_tag="SARI_00033"
+ CDS 35676..36668
+ /locus_tag="SARI_00033"
+ /inference="protein motif:FPrintScan:IPR000943"
+ /inference="protein motif:HMMPfam:IPR007624"
+ /inference="protein motif:HMMPfam:IPR007627"
+ /inference="protein motif:HMMPfam:IPR007630"
+ /inference="protein motif:HMMPfam:IPR009042"
+ /inference="protein motif:HMMTigr:IPR012761"
+ /inference="protein motif:ScanRegExp:IPR000943"
+ /inference="protein motif:superfamily:IPR013324"
+ /inference="protein motif:superfamily:IPR013325"
+ /inference="similar to AA sequence:INSD:CAD06030.1"
+ /note="sigma factors are initiation factors that promote
+ the attachment of RNA polymerase to specific initiation
+ sites and are then released; this sigma factor controls a
+ regulon of genes required for protection against external
+ stresses"
+ /codon_start=1
+ /transl_table=11
+ /product="RNA polymerase sigma factor RpoS"
+ /protein_id="YP_001569129.1"
+ /db_xref="GI:161502017"
+ /db_xref="InterPro:IPR000943"
+ /db_xref="InterPro:IPR007624"
+ /db_xref="InterPro:IPR007627"
+ /db_xref="InterPro:IPR007630"
+ /db_xref="InterPro:IPR009042"
+ /db_xref="InterPro:IPR012761"
+ /db_xref="InterPro:IPR013324"
+ /db_xref="InterPro:IPR013325"
+ /translation="MSQNTLKVHDLNEDAEFDENGVEAFDEKALSEEEPSDNDLAEEE
+ LLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLV
+ VKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFSFSTYATWWIRQTIERAIMN
+ QTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNER
+ ITSVDTPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLAR
+ RFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE"
+ misc_feature 35685..36659
+ /locus_tag="SARI_00033"
+ /note="RNA polymerase sigma factor RpoS; Validated;
+ Region: PRK05657"
+ /db_xref="CDD:235548"
+ misc_feature 35841..35948
+ /locus_tag="SARI_00033"
+ /note="Sigma-70 factor, region 1.2; Region: Sigma70_r1_2;
+ pfam00140"
+ /db_xref="CDD:201030"
+ misc_feature 35955..36167
+ /locus_tag="SARI_00033"
+ /note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542"
+ /db_xref="CDD:218138"
+ misc_feature 36192..36425
+ /locus_tag="SARI_00033"
+ /note="Sigma-70 region 3; Region: Sigma70_r3; pfam04539"
+ /db_xref="CDD:146934"
+ misc_feature 36441..36617
+ /locus_tag="SARI_00033"
+ /note="Sigma70, region (SR) 4 refers to the most
+ C-terminal of four conserved domains found in Escherichia
+ coli (Ec) sigma70, the main housekeeping sigma, and
+ related sigma-factors (SFs). A SF is a dissociable subunit
+ of RNA polymerase, it directs bacterial or...; Region:
+ Sigma70_r4; cd06171"
+ /db_xref="CDD:100119"
+ misc_feature order(36474..36476,36504..36506,36534..36539,36567..36569,
+ 36573..36578,36582..36590,36594..36599,36603..36605)
+ /locus_tag="SARI_00033"
+ /note="DNA binding residues [nucleotide binding]"
+ /db_xref="CDD:100119"
+ gene complement(36715..36951)
+ /locus_tag="SARI_00034"
+ CDS complement(36715..36951)
+ /locus_tag="SARI_00034"
+ /inference="similar to AA sequence:REFSEQ:NP_457312.1"
+ /note="'COG: NOG14130 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569130.1"
+ /db_xref="GI:161502018"
+ /translation="MICPRCADEHIELMATSPVKGVWTVYQCQHCLYTWRDTEPLRRT
+ SREHYPQAFRMTQKDIDNAPMVPSIPPLLAEDKR"
+ misc_feature complement(<36847..36945)
+ /locus_tag="SARI_00034"
+ /note="Protein of unknown function (DUF1062); Region:
+ DUF1062; cl01786"
+ /db_xref="CDD:242707"
+ gene complement(36962..38389)
+ /locus_tag="SARI_00035"
+ CDS complement(36962..38389)
+ /locus_tag="SARI_00035"
+ /inference="protein motif:HMMPfam:IPR002830"
+ /inference="protein motif:HMMTigr:IPR002830"
+ /inference="similar to AA sequence:REFSEQ:NP_461843.1"
+ /note="'KEGG: gvi:gll3010 3.8e-52
+ 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD K03182;
+ COG: COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase
+ and related decarboxylases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569131.1"
+ /db_xref="GI:161502019"
+ /db_xref="InterPro:IPR002830"
+ /translation="MAFDDLRSFLHALDQQGQLLKISEEVNAEPDLAAAANATGRIGD
+ GAPALWFDNIRGFTDARVAMNTIGSWQNHAISLGLPPNTPVKKQIDEFIRRWDNFPVA
+ PERRANPGWAENTVDGDAINLFDILPLFRLNDGDGGFYLDKACVVSRDPLDPDNFGKQ
+ NVGIYRMEVKGKRKLGLQPVPMHDIALHLHKAEERGEDLPIAITLGNDPIITLMGATP
+ LKYDQSEYEMAGALRESPYPIATAPLTGFDVPWGSEVILEGVIESRKREIEGPFGEFT
+ DHYSGGRNMTVVRIDKVSYRSKPIFESLYLGMPWTEIDYLMGPATCVPLYQQLKAEFP
+ EVQAVNAMYTHGLLAIISTKKRYGGFARAVGLRAMTTPHGLGYVKMVIMVDEDVDPFN
+ LPQVMWALSSKVNPAGDLVQLPNMSVLELDPGSSPAGITDKLIIDATTPVAPDNRGHY
+ SQPVSDLPETKAWAEKLTAMLANRK"
+ misc_feature complement(36980..38389)
+ /locus_tag="SARI_00035"
+ /note="3-polyprenyl-4-hydroxybenzoate decarboxylase and
+ related decarboxylases [Coenzyme metabolism]; Region:
+ UbiD; COG0043"
+ /db_xref="CDD:223121"
+ gene complement(38389..38982)
+ /locus_tag="SARI_00036"
+ CDS complement(38389..38982)
+ /locus_tag="SARI_00036"
+ /inference="protein motif:Gene3D:IPR003382"
+ /inference="protein motif:HMMPfam:IPR003382"
+ /inference="protein motif:HMMTigr:IPR004507"
+ /inference="protein motif:superfamily:IPR003382"
+ /inference="similar to AA sequence:REFSEQ:YP_217838.1"
+ /note="'KEGG: sec:SC2851 1.2e-96 pad; putative
+ flavoprotein K03186;
+ COG: COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569132.1"
+ /db_xref="GI:161502020"
+ /db_xref="InterPro:IPR003382"
+ /db_xref="InterPro:IPR004507"
+ /translation="MRLIVGMTGATGAPLGVALLQALRTIPNVETHLVMSKWAKTTIE
+ LETPYTSMEVAALADYCHSPADQAATISSGSFRTDGMIIIPCSMKTLAGIRSGYAEGL
+ VGRAADVVLKEGRKLVLVPREMPLSTIHLENMLTLSHMGVAIVPPMPAFYNLPQTVDD
+ IIQHIVARVLDQFGLEHTRARRWQGLRQAANFSQENG"
+ misc_feature complement(38419..38982)
+ /locus_tag="SARI_00036"
+ /note="3-polyprenyl-4-hydroxybenzoate decarboxylase
+ [Coenzyme metabolism]; Region: UbiX; COG0163"
+ /db_xref="CDD:223241"
+ misc_feature complement(38593..38982)
+ /locus_tag="SARI_00036"
+ /note="Flavoprotein; Region: Flavoprotein; pfam02441"
+ /db_xref="CDD:217035"
+ gene 39119..39556
+ /locus_tag="SARI_00037"
+ CDS 39119..39556
+ /locus_tag="SARI_00037"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000835"
+ /inference="protein motif:HMMSmart:IPR000835"
+ /inference="protein motif:ScanRegExp:IPR000835"
+ /inference="similar to AA sequence:INSD:AAX66756.1"
+ /note="'COG: COG1846 Transcriptional regulators;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569133.1"
+ /db_xref="GI:161502021"
+ /db_xref="InterPro:IPR000835"
+ /db_xref="InterPro:IPR011991"
+ /translation="MIEKVNLSGVIMELRNTAFHLLRQLFQQHTARWQHELPELTKPQ
+ YAVMRAIAEHSGIEQVDLTEAAVCTKATLAEMLSRMENRGLVKRENDPLDKRRRFVYL
+ TAQGRALLAAAIPLGDRVDDEFLGRLSDEEREQFAQLVRKMMA"
+ misc_feature 39161..39511
+ /locus_tag="SARI_00037"
+ /note="MarR family; Region: MarR_2; cl17246"
+ /db_xref="CDD:247800"
+ misc_feature 39179..39553
+ /locus_tag="SARI_00037"
+ /note="Transcriptional regulators [Transcription]; Region:
+ MarR; COG1846"
+ /db_xref="CDD:224759"
+ gene complement(39575..40297)
+ /locus_tag="SARI_00038"
+ /note="Pseudogene based on alignment with
+ gi|16766225|ref|NP_461840.1|"
+ /pseudogene="unknown"
+ gene complement(40680..41591)
+ /locus_tag="SARI_00039"
+ CDS complement(40680..41591)
+ /locus_tag="SARI_00039"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="protein motif:HMMPfam:IPR005119"
+ /inference="similar to AA sequence:INSD:CAD06018.1"
+ /note="'KEGG: shn:Shewana3_3435 1.1e-07 transcriptional
+ regulator, LysR family K06022;
+ COG: COG0583 Transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="LysR family transcriptional regulator"
+ /protein_id="YP_001569134.2"
+ /db_xref="GI:448236176"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR005119"
+ /db_xref="InterPro:IPR011991"
+ /translation="MLNLQRMSLFVAVVDSGSFTAAAAVSGQTKAVVSFNIRQLEKEL
+ GVTLLLRSTRRLTLTDAGVLFYQKGVNLLNAAKNLQDEVRASHSGLGGELRITTTSEF
+ GEQVVIPVLAQFSQRHPDLRIRHMSSSHHADLIAERFDVAIRLGSLADSRYRATLISR
+ FTILPVASPQWLARYPVSSLESLAQAEWIIHERLSTPLRWTLTDNDGQHSRLEISKAG
+ RISVDSARSLMAFALAGSGVALLPEWLVKTALEDGALVHVLPDYHFPRQGIYAVYPDT
+ RHVSTKVRAFIDFLRSQWNCGEHAPSS"
+ misc_feature complement(40713..41588)
+ /locus_tag="SARI_00039"
+ /note="Transcriptional regulator [Transcription]; Region:
+ LysR; COG0583"
+ /db_xref="CDD:223656"
+ misc_feature complement(41406..41582)
+ /locus_tag="SARI_00039"
+ /note="Bacterial regulatory helix-turn-helix protein, lysR
+ family; Region: HTH_1; pfam00126"
+ /db_xref="CDD:215735"
+ misc_feature complement(40722..41318)
+ /locus_tag="SARI_00039"
+ /note="The C-terminal substrate binding domain of
+ LysR-type transcriptional regulator CrgA and its related
+ homologs, contains the type 2 periplasmic binding domain;
+ Region: PBP2_CrgA_like; cd08422"
+ /db_xref="CDD:176114"
+ misc_feature complement(order(40785..40787,40866..40868,40917..40919,
+ 41109..41111,41115..41117,41157..41159,41274..41276,
+ 41286..41288))
+ /locus_tag="SARI_00039"
+ /note="putative effector binding pocket; other site"
+ /db_xref="CDD:176114"
+ misc_feature complement(order(40890..40892,40899..40904,40923..40937,
+ 41031..41033,41211..41231,41235..41237,41247..41249,
+ 41256..41261,41265..41270,41280..41285))
+ /locus_tag="SARI_00039"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:176114"
+ gene 41700..42908
+ /locus_tag="SARI_00040"
+ CDS 41700..42908
+ /locus_tag="SARI_00040"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="protein motif:ScanRegExp:IPR005829"
+ /inference="similar to AA sequence:REFSEQ:YP_151935.1"
+ /note="'KEGG: ani:AN1180.2 2.4e-05 hypothetical protein
+ K04428;
+ COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569135.2"
+ /db_xref="GI:448236177"
+ /db_xref="InterPro:IPR005829"
+ /db_xref="InterPro:IPR011701"
+ /translation="MTYRSKVAVVYLLGFFLDLINLFIASVAFPAMSVDLHTSISALA
+ WVSNGYIAGLTLSVPFSAFFSRYLGARRLIMFSLILFSVAAAAAGFADSLYGLVFWRI
+ VQGAGGGLLIPVGQALTWQQFKPHERAGVSSVVMMVALLAPACSPAIGGLLVETCGWR
+ WIFFATLPVAIITLLLAYLWLNADSTTVASARLLHLPLLADRLLRFAMIVYQCVPGMF
+ IGISVVGMFYLQNVAQLSPAAAGSLMLPWSIASFVAIMLTGRYFNWLGPRPLIIVGCL
+ LQAAGILLLTHVTPATSHRVLMVIFALMGAGGSLCSSTAQSSAFLTIARQEMPDASAL
+ WNLNRQLSFFIGATLLTMLLNALQRVLSLEAAYRWTFIAAAIITLLPLIDAVCLNNRK
+ VLLYLKKERP"
+ misc_feature 41724..42770
+ /locus_tag="SARI_00040"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature 41727..42740
+ /locus_tag="SARI_00040"
+ /note="Major Facilitator Superfamily; Region: MFS_1;
+ pfam07690"
+ /db_xref="CDD:219516"
+ misc_feature order(41763..41765,41772..41780,41784..41789,41838..41840,
+ 41847..41852,41859..41861,41871..41876,41880..41885,
+ 42021..42026,42033..42038,42045..42050,42057..42059,
+ 42093..42098,42105..42110,42126..42128,42342..42344,
+ 42351..42356,42363..42368,42375..42377,42417..42419,
+ 42429..42431,42441..42443,42450..42452,42462..42464,
+ 42612..42614,42621..42626,42633..42635,42645..42650,
+ 42657..42659,42690..42695,42702..42707,42714..42719,
+ 42726..42728)
+ /locus_tag="SARI_00040"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene 42905..43285
+ /locus_tag="SARI_00041"
+ CDS 42905..43285
+ /locus_tag="SARI_00041"
+ /inference="similar to AA sequence:INSD:AAL21790.1"
+ /note="'COG: COG4460 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569136.1"
+ /db_xref="GI:161502024"
+ /translation="MNSYKEEILHTHVAIENWLSRGAGSLEALLQRFAADFSMVTPGG
+ ACLDYPALGAFFQAQRACRPGLVIVVEHIDLVAEWPEGAALRYRERQQLPGQAETVRW
+ STVILKRERGRIVWRHLHETTVTA"
+ misc_feature 42905..43282
+ /locus_tag="SARI_00041"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG4460"
+ /db_xref="CDD:226867"
+ gene complement(43341..45923)
+ /locus_tag="SARI_00042"
+ CDS complement(43341..45923)
+ /locus_tag="SARI_00042"
+ /inference="protein motif:BlastProDom:IPR000432"
+ /inference="protein motif:HMMPfam:IPR000432"
+ /inference="protein motif:HMMPfam:IPR007695"
+ /inference="protein motif:HMMPfam:IPR007696"
+ /inference="protein motif:HMMPfam:IPR007860"
+ /inference="protein motif:HMMPfam:IPR007861"
+ /inference="protein motif:HMMSmart:IPR000432"
+ /inference="protein motif:HMMSmart:IPR007696"
+ /inference="protein motif:HMMTigr:IPR005748"
+ /inference="protein motif:ScanRegExp:IPR000432"
+ /note="This protein performs the mismatch recognition step
+ during the DNA repair process"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA mismatch repair protein MutS"
+ /protein_id="YP_001569137.1"
+ /db_xref="GI:161502025"
+ /db_xref="InterPro:IPR000432"
+ /db_xref="InterPro:IPR005748"
+ /db_xref="InterPro:IPR007695"
+ /db_xref="InterPro:IPR007696"
+ /db_xref="InterPro:IPR007860"
+ /db_xref="InterPro:IPR007861"
+ /translation="MSKINMNEDIDKDFSSHTPMMQQYLKLKAQHPEILLFYRMGDFY
+ ELFYDDAKRASQLLDISLTKRGASAGEPIPMAGIPHHAVENYLAKLVNQGESVAICEQ
+ IGDPATSKGPVERKVVRIVTPGTISDEALLQERQDNLLAAIWQDGKGYGYATLDISSG
+ RFRLSEPADRETMAAELQRTNPAELLYAEDFAEMALIEGRRGLRRRPLWEFEIDTARQ
+ QLNLQFGTRDLVGFGVENASRGLCAAGCLLQYVKDTQRTSLPHIRSITMERQQDSIIM
+ DAATRRNLEITQNLAGGIENTLAAVLDCTVTPMGSRMLKRWLHMPIRNTDILRERQQT
+ IGALQDTVSELQPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPELHAQLETV
+ DSAPVQALRKKMGDFAELRDLLERAIIDAPPVLVRDGGVIAPGYHQELDEWRALADGA
+ TDYLDRLEIRERERTGLDTLKVGYNAVHGYYIQISRGQSHLAPINYVRRQTLKNAERY
+ IIPELKEYEDKVLTSKGKALALEKQLYDELFDLLLPHLADLQQSASALAELDVLVNLA
+ ERAYTLNYTCPTFTDKPGIRIIEGRHPVVEQVLNEPFIANPLNLSPQRRMLIITGPNM
+ GGKSTYMRQTALIALLAWIGSYVPAQNVEIGPIDRIFTRVGAADDLASGRSTFMVEMT
+ ETANILHNATENSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFELT
+ QLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARQ
+ KLRELESISPNAAATQVDGTQMSLLAAPEETSPAVEALENLDPDSLTPRQALEWIYRL
+ KSLV"
+ misc_feature complement(43344..45890)
+ /locus_tag="SARI_00042"
+ /note="DNA mismatch repair protein MutS; Provisional;
+ Region: PRK05399"
+ /db_xref="CDD:235444"
+ misc_feature complement(45534..45872)
+ /locus_tag="SARI_00042"
+ /note="MutS domain I; Region: MutS_I; pfam01624"
+ /db_xref="CDD:216613"
+ misc_feature complement(45135..45512)
+ /locus_tag="SARI_00042"
+ /note="MutS domain II; Region: MutS_II; pfam05188"
+ /db_xref="CDD:218486"
+ misc_feature complement(44328..45092)
+ /locus_tag="SARI_00042"
+ /note="MutS domain III; Region: MutS_III; pfam05192"
+ /db_xref="CDD:218489"
+ misc_feature complement(43524..44168)
+ /locus_tag="SARI_00042"
+ /note="ATP-binding cassette domain of MutS1 homolog;
+ Region: ABC_MutS1; cd03284"
+ /db_xref="CDD:213251"
+ misc_feature complement(44040..44063)
+ /locus_tag="SARI_00042"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213251"
+ misc_feature complement(order(43719..43721,43821..43826,43929..43931,
+ 44037..44045,44049..44054))
+ /locus_tag="SARI_00042"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213251"
+ misc_feature complement(43929..43940)
+ /locus_tag="SARI_00042"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213251"
+ misc_feature complement(43875..43916)
+ /locus_tag="SARI_00042"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213251"
+ misc_feature complement(43821..43838)
+ /locus_tag="SARI_00042"
+ /note="Walker B; other site"
+ /db_xref="CDD:213251"
+ misc_feature complement(43803..43814)
+ /locus_tag="SARI_00042"
+ /note="D-loop; other site"
+ /db_xref="CDD:213251"
+ misc_feature complement(43713..43733)
+ /locus_tag="SARI_00042"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213251"
+ gene 46026..46379
+ /locus_tag="SARI_00043"
+ CDS 46026..46379
+ /locus_tag="SARI_00043"
+ /inference="similar to AA sequence:REFSEQ:YP_217827.1"
+ /note="'COG: NOG29516 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569138.1"
+ /db_xref="GI:161502026"
+ /translation="MVLLLLWATNSGDTLKTTLNQAFIINKLSIDVKPELSSSGKVVF
+ EANPDQKPYIVFDDHRDSPVGFGVKVSLTKKTYVIQRRVSSGDRSVSEGKKPSSVLKV
+ KVGNVSDFPSIDQAA"
+ gene complement(46535..47011)
+ /locus_tag="SARI_00044"
+ CDS complement(46535..47011)
+ /locus_tag="SARI_00044"
+ /inference="protein motif:HMMPfam:IPR000653"
+ /inference="protein motif:HMMPfam:IPR001584"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:REFSEQ:NP_943514.1"
+ /note="'KEGG: nwi:Nwi_1143 1.4e-08 helix-turn-helix,
+ fis-type K00986;
+ COG: COG2801 Transposase and inactivated derivatives;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569139.1"
+ /db_xref="GI:161502027"
+ /db_xref="InterPro:IPR000653"
+ /db_xref="InterPro:IPR001584"
+ /db_xref="InterPro:IPR012337"
+ /translation="MDFVSDNLFNGRRFRALPVVDNFSRECLAIHAGKSLKGEDVVRI
+ MEALRVLDKRLPVRIQTDNGSEFISKSLDKWAYEHGVTMDFSRPGKPTDNPFIESFNG
+ SLRDECLNIHWFLSLEDAQEKLDNWRREYNHERTHSSLNDMTPAEFIRSLRKDEDL"
+ misc_feature complement(46550..>47011)
+ /locus_tag="SARI_00044"
+ /note="Transposase and inactivated derivatives [DNA
+ replication, recombination, and repair]; Region: Tra5;
+ COG2801"
+ /db_xref="CDD:225361"
+ misc_feature complement(46688..47011)
+ /locus_tag="SARI_00044"
+ /note="Integrase core domain; Region: rve; pfam00665"
+ /db_xref="CDD:216050"
+ misc_feature complement(46577..46777)
+ /locus_tag="SARI_00044"
+ /note="Integrase core domain; Region: rve_3; pfam13683"
+ /db_xref="CDD:222316"
+ gene complement(47233..48171)
+ /locus_tag="SARI_00045"
+ CDS complement(47233..48171)
+ /locus_tag="SARI_00045"
+ /inference="protein motif:HMMPfam:IPR002513"
+ /inference="similar to AA sequence:REFSEQ:ZP_00829772.1"
+ /note="'COG: COG4644 Transposase and inactivated
+ derivatives, TnpA family;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569140.1"
+ /db_xref="GI:161502028"
+ /db_xref="InterPro:IPR002513"
+ /translation="MRFIAPVRTVHAGPNRKYFGSSRGITWYNFISDQYSGFHGVVVP
+ GTLRDSIFVLEGLLEQQTGLNPTEIMTDTAGSSDLIFGLFWLLGYQFSPRLADAGASV
+ FWRVDKDADYGVLNDLARNTANTRKIEQHWDDMMRMAGSLTLGKIRASVAIRSLLSSD
+ RPSGLTQAIIEAGKINKTLYLLNYIDDEDYRRRILTQLNRGESRHAVARAICHGQKGE
+ IRKRYQDGQEEQLGALGLVTNAVVLWNTIYIQAALDHLRNEGETINEEDEVRLSPLRH
+ AHINMLGHYTFTLAEQITKGQLRPLKQAEETDEWPL"
+ misc_feature complement(47317..>48171)
+ /locus_tag="SARI_00045"
+ /note="Tn3 transposase DDE domain; Region: DDE_Tnp_Tn3;
+ pfam01526"
+ /db_xref="CDD:216552"
+ gene complement(48295..49638)
+ /locus_tag="SARI_00046"
+ CDS complement(48295..49638)
+ /locus_tag="SARI_00046"
+ /inference="protein motif:HMMPfam:IPR002513"
+ /inference="similar to AA sequence:REFSEQ:ZP_00829772.1"
+ /note="'COG: COG4644 Transposase and inactivated
+ derivatives, TnpA family;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569141.1"
+ /db_xref="GI:161502029"
+ /db_xref="InterPro:IPR002513"
+ /translation="MPDGVRTSRFEQLRKGPVAISGPAFNQAVVRYLKLKAFGMQSLD
+ FTGIPPVRFNALARYADMISVYKIARMPPARRTAMLVAFVRSCEISALDNALDVLDGV
+ IADIGREAKKIGQKKRLRTLKDLDKSALELAHICSVLLDENIDSELLRTTIFEKCPPA
+ RLADTITFINAIARPPDASVHDEMVEQYGRVRRFLPCLLENIEFSAAPAGETTLEAIR
+ YLAAIRSTRRQHIDDAPMAIITGPWKRLCYGKDGHLSRQGYTLCVMNKLRDSLRRRDI
+ YVARSERWGDPRAKLLQGQDWHTSRVQVYRSLGHPLNAGEAVNALTRQLDTVYRQVAK
+ NFADNQAVSLDFTGKRTKLTIAHLNGLDEPPTLKLLSKHISDLLPVVDLTELLLEINA
+ HIGFADEFTHASEAGARMDDLTVSICAVLLAEACNIGMEPFIRPNIPALTRYRLS"
+ misc_feature complement(<48298..48471)
+ /locus_tag="SARI_00046"
+ /note="Tn3 transposase DDE domain; Region: DDE_Tnp_Tn3;
+ cl14901"
+ /db_xref="CDD:246756"
+ gene complement(49882..50337)
+ /locus_tag="SARI_00047"
+ CDS complement(49882..50337)
+ /locus_tag="SARI_00047"
+ /inference="protein motif:HMMPfam:IPR002513"
+ /inference="similar to AA sequence:INSD:CAC14717.1"
+ /note="'COG: COG4644 Transposase and inactivated
+ derivatives, TnpA family;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569142.1"
+ /db_xref="GI:161502030"
+ /db_xref="InterPro:IPR002513"
+ /translation="MLKILQSFRLAPKWEIRVKKTTVFFTHAREATLPADFLNADQRA
+ SYGQFSGEPNDVQLARFFLLDEADMAFINNRRGRANRLAVALLTGCVRFLGTWPHDLS
+ SIPANVQWFVARQLGISDTGVLSEYSRRETTLREHQALIRRQYGYRDFA"
+ misc_feature complement(<49885..50229)
+ /locus_tag="SARI_00047"
+ /note="Domain of unknown function (DUF4158); Region:
+ DUF4158; pfam13700"
+ /db_xref="CDD:222325"
+ gene 50412..50981
+ /locus_tag="SARI_00048"
+ CDS 50412..50981
+ /locus_tag="SARI_00048"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR006119"
+ /inference="protein motif:HMMPfam:IPR006120"
+ /inference="protein motif:ScanRegExp:IPR006118"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:INSD:AAF23988.1"
+ /note="'COG: COG1961 Site-specific recombinases, DNA
+ invertase Pin homologs;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569143.1"
+ /db_xref="GI:161502031"
+ /db_xref="InterPro:IPR006118"
+ /db_xref="InterPro:IPR006119"
+ /db_xref="InterPro:IPR006120"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /translation="MLVGYARVSTDDQNLNLQRDALKLAGCTKIFEDQISGAKAERPG
+ LHAVLQFIRPGDTLVVWRLDRLSRSLKDLIEMVRQLESNSIGLKSLQESIDTTSSSGM
+ LIFHLFGALAEFERNLTRERTQVGLQAARARGRKGGRPKVLNKDKQALAVQLYDERKH
+ TVAQICELMGVSRPTLYKYIDAARSVTNV"
+ misc_feature 50412..50951
+ /locus_tag="SARI_00048"
+ /note="multiple promoter invertase; Provisional; Region:
+ mpi; PRK13413"
+ /db_xref="CDD:184041"
+ misc_feature 50415..50789
+ /locus_tag="SARI_00048"
+ /note="Serine Recombinase (SR) family, Resolvase and
+ Invertase subfamily, catalytic domain; members contain a
+ C-terminal DNA binding domain. Serine recombinases
+ catalyze site-specific recombination of DNA molecules by a
+ concerted, four-strand cleavage and...; Region: SR_ResInv;
+ cd03768"
+ /db_xref="CDD:239737"
+ misc_feature order(50430..50432,50436..50438,50601..50606,50613..50615)
+ /locus_tag="SARI_00048"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:239737"
+ misc_feature 50436..50438
+ /locus_tag="SARI_00048"
+ /note="catalytic nucleophile [active]"
+ /db_xref="CDD:239737"
+ misc_feature order(50598..50600,50730..50735,50739..50744,50754..50756)
+ /locus_tag="SARI_00048"
+ /note="Presynaptic Site I dimer interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:239737"
+ misc_feature order(50616..50618,50631..50636,50718..50720,50727..50732,
+ 50739..50744,50751..50753,50760..50762)
+ /locus_tag="SARI_00048"
+ /note="Synaptic Antiparallel dimer interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:239737"
+ misc_feature order(50685..50693,50718..50723,50730..50735,50742..50744,
+ 50754..50756,50763..50765,50775..50777)
+ /locus_tag="SARI_00048"
+ /note="Synaptic Flat tetramer interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:239737"
+ misc_feature order(50685..50687,50733..50735,50742..50744,50754..50756,
+ 50763..50765,50775..50777)
+ /locus_tag="SARI_00048"
+ /note="Synaptic Site I dimer interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:239737"
+ misc_feature order(50757..50759,50775..50780)
+ /locus_tag="SARI_00048"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:239737"
+ misc_feature 50829..50951
+ /locus_tag="SARI_00048"
+ /note="Helix-turn-helix domain of Hin and related
+ proteins, a family of DNA-binding domains unique to
+ bacteria and represented by the Hin protein of Salmonella.
+ The basic HTH domain is a simple fold comprised of three
+ core helices that form a right-handed...; Region:
+ HTH_Hin_like; cd00569"
+ /db_xref="CDD:119388"
+ misc_feature order(50829..50834,50931..50936,50940..50948)
+ /locus_tag="SARI_00048"
+ /note="DNA-binding interface [nucleotide binding]; DNA
+ binding site"
+ /db_xref="CDD:119388"
+ gene 51090..52031
+ /locus_tag="SARI_00049"
+ CDS 51090..52031
+ /locus_tag="SARI_00049"
+ /inference="similar to AA sequence:INSD:ABP58869.1"
+ /note="'COG: COG3501 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569144.1"
+ /db_xref="GI:161502032"
+ /translation="MIDQDDTMLTDITAVTDNAYKLNINNSPVIPDVLRFRGTEELSK
+ PFSWRIEFTTPQSNIRPEDMLMKYASFILRDSKRVHGIITRLEWLSTSADQSHYAATL
+ ESRLALLSRSRRCALYQNLSVPEVVEQVLRSHGLEGPDFDFRLSRQYPVRELITQWRE
+ TDLEFIQRILSEVGIWFRQEMNDVTELDVTLFGDSQLHYLFNGVLPYHEPSGLYDGAE
+ LCCWGVRTWHNTVTGTISTRDYNPRTASEPMDSAVSVRSPAVTIGEHYRYAEPYREAG
+ DDTTSEPESESGAFYARLHHERELNKSARVHLFSNAY"
+ misc_feature 51204..52025
+ /locus_tag="SARI_00049"
+ /note="Phage late control gene D protein (GPD); Region:
+ Phage_GPD; pfam05954"
+ /db_xref="CDD:218824"
+ gene 52044..53630
+ /locus_tag="SARI_00050"
+ CDS 52044..53630
+ /locus_tag="SARI_00050"
+ /inference="protein motif:HMMPfam:IPR006533"
+ /inference="similar to AA sequence:INSD:ABP58869.1"
+ /note="'COG: COG3501 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569145.1"
+ /db_xref="GI:161502033"
+ /db_xref="InterPro:IPR006533"
+ /translation="MVFDPQGVNLKDLSDGVIITFTSFTGARDSRLHVSVWGMPYREE
+ YGFRPAEMARPEIHGTLPARVESREKNDTYAHIDEYGRFRVRLDFNLDDCEPGYAYPW
+ LRMAKPYTGDGYGWHTPLIDGTEVAIAYCNGDIDLPYISHAFHDSEHLDVVNRDNRSQ
+ NILRTAARNELRMEDKRGEEHIALSTEFAKSQLNQGNITDAQDKPRGTGFELRTDERG
+ VIRVAKGLFISADGQQKAAGGVLDMDTALREIDICLQQLRQLEMAAEQAQALKADVDS
+ QIRMFNERLKPLNETLVFSAPEGIALTSGEHMQLAATSNVAINAGGDISVGVMGNMTA
+ LAGDKIGMFSRTGQLSLKASEGTIEMQARNGNMRLFAEKKLTISSESDISFTGKKRIT
+ LIGGGSYLKLEAGKVEYGTTTTYMRKVKRTMAAAAQNMPMKMPRTGTAYIYSAIYQLQ
+ DKNGNILVNTPYHLTTPSGQTATGFSDNEGRSVPVYTRQQENVELHVLTKTSQPEESM
+ WFVGETDTQQLETELRESQP"
+ misc_feature 52293..52490
+ /locus_tag="SARI_00050"
+ /note="Phage-related baseplate assembly protein; Region:
+ Phage_base_V; pfam04717"
+ /db_xref="CDD:218225"
+ misc_feature 52518..52796
+ /locus_tag="SARI_00050"
+ /note="Putative type VI secretion system Rhs element Vgr;
+ Region: T6SS_Vgr; pfam13296"
+ /db_xref="CDD:205476"
+ misc_feature 52884..53276
+ /locus_tag="SARI_00050"
+ /note="Uncharacterized protein conserved in bacteria
+ (DUF2345); Region: DUF2345; pfam10106"
+ /db_xref="CDD:220574"
+ gene 53630..54919
+ /locus_tag="SARI_00051"
+ CDS 53630..54919
+ /locus_tag="SARI_00051"
+ /inference="similar to AA sequence:REFSEQ:YP_001110267.1"
+ /note="'COG: NOG18468 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569146.1"
+ /db_xref="GI:161502034"
+ /translation="MEMPDLPDTPTGAPNAPTGTNNQPWDCTTTGVEMVEKQSRLPNT
+ ENRQYLHIKVEYAMRFPQLSAQIRREGKTYRMSLKQTMMSGLIRVDEIARNYCWYYKA
+ EVAFDMRTTPPRPFLSSTLLKKDGAGRRHTTNPFPVPGKGIYRRPDVIIVKNKEDRWP
+ GLAGPDTEGNMHSDNLARLVEVKFPGDTLYEDQYDEYMKIVGKDRNRMTILEIHDCRP
+ EEHQWIDQAVNVTMKAWQTSGAKYWPLVLYPPIFMPRPPSTPAAARIEPWTYAGHVVA
+ DLSEGAVRGVAEGWDALSKETQQVLNSAASWLNDSGEWVYRKGSEAWVWASKTGKSVK
+ SWTNAQIKAAWTEIQHATDMTLDMLKQVDWVQVLTNVAKTVGVILVAVGIGVLVVTLG
+ ILEAIIGAFLLIVRLAISAWGTLAAILGTGTAALAVQ"
+ misc_feature 53921..54274
+ /locus_tag="SARI_00051"
+ /note="This model contains proteins with the VRR-NUC
+ domain; Region: VRR_NUC; smart00990"
+ /db_xref="CDD:214959"
+ gene 54932..56146
+ /locus_tag="SARI_00052"
+ CDS 54932..56146
+ /locus_tag="SARI_00052"
+ /inference="similar to AA sequence:REFSEQ:NP_794057.1"
+ /note="'COG: NOG18467 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569147.1"
+ /db_xref="GI:161502035"
+ /translation="MELQDFELSYIEKWLPEASVKYKDGSPAVNLGLIITVFFKDGHT
+ PEVRRRMVECVDRFYAEFKPHLKKTITKNWVGITEKNYAKKRQEILDSTPEEIFSWYL
+ GSAEQDFLAPDYSILIMGKRIFHNDNDRSVIKLTLPLSLLKEPDGKKRYEGWLMWLCD
+ TFSVESGYAGLSFALPYARERMFPYEFALAQRFSGVMVDSLGTLEGGEAVEGLKGACW
+ YTILGTPWLEKLGGAERLRHRLAKTPEISLLSYNNGILLKAGELPPPLGEMKIEGLSP
+ LLIKVNQIIRPVRYDGHNGLHFHSEYENFQFEKESSMAWFARFDEASALLDKEEMGKS
+ YDPVRIKCWTDETAPHAGQWAAMVNGTTEYIQTREGQKLPPFEDKYGKQHRACWKLLK
+ RDDNGSVYTLPE"
+ misc_feature 55265..55888
+ /locus_tag="SARI_00052"
+ /note="Protein of unknown function (DUF3396); Region:
+ DUF3396; pfam11876"
+ /db_xref="CDD:221284"
+ gene 56215..56487
+ /locus_tag="SARI_00053"
+ CDS 56215..56487
+ /locus_tag="SARI_00053"
+ /inference="similar to AA sequence:INSD:EDK49629.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569148.1"
+ /db_xref="GI:161502036"
+ /translation="MIELSAEQRQLAKIVHDYASQFPLTEDGDTQLLQGCYDYMEAFK
+ GVMDSASKVQMDYICLQYPGYFRFAKWMERLAQGIADGVIKVPKDH"
+ gene complement(56661..56891)
+ /locus_tag="SARI_00054"
+ CDS complement(56661..56891)
+ /locus_tag="SARI_00054"
+ /inference="similar to AA sequence:INSD:AAS58598.1"
+ /note="'COG: COG2801 Transposase and inactivated
+ derivatives;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569149.1"
+ /db_xref="GI:161502037"
+ /translation="MREAYRISVRRGCGLLMQSRTVYHWQSRRDDRAITLRIREIAET
+ RIRYGCPRIHIQLRREGWPVKGSEAQPYENVR"
+ gene complement(56924..57190)
+ /locus_tag="SARI_00055"
+ CDS complement(56924..57190)
+ /locus_tag="SARI_00055"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR002514"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:REFSEQ:YP_153352.1"
+ /note="'COG: COG2801 Transposase and inactivated
+ derivatives;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569150.1"
+ /db_xref="GI:161502038"
+ /db_xref="InterPro:IPR002514"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /translation="MKKTRYTEEQIAFALKQAETGTRVGEVCRKMGISEATFYNWKKK
+ FAGLGVTELRRLRQLEDENQRLKKLVAELSLDKEMLQEVLKQKF"
+ misc_feature complement(57068..57187)
+ /locus_tag="SARI_00055"
+ /note="Helix-turn-helix domain of Hin and related
+ proteins, a family of DNA-binding domains unique to
+ bacteria and represented by the Hin protein of Salmonella.
+ The basic HTH domain is a simple fold comprised of three
+ core helices that form a right-handed...; Region:
+ HTH_Hin_like; cd00569"
+ /db_xref="CDD:119388"
+ misc_feature complement(order(57068..57076,57080..57085,57179..57187))
+ /locus_tag="SARI_00055"
+ /note="DNA-binding interface [nucleotide binding]; DNA
+ binding site"
+ /db_xref="CDD:119388"
+ misc_feature complement(<56936..57157)
+ /locus_tag="SARI_00055"
+ /note="Winged helix-turn helix; Region: HTH_29; pfam13551"
+ /db_xref="CDD:222216"
+ gene complement(57942..58538)
+ /locus_tag="SARI_00056"
+ CDS complement(57942..58538)
+ /locus_tag="SARI_00056"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569151.1"
+ /db_xref="GI:161502039"
+ /translation="MPSALSEFNFSFDQKEKIKKVLYDEVFSDLYINLLRLDNLLRPY
+ LVLNHDLSYFDKFTAELTNNQIKRSLRDNQTEFNVRSPIIKDGYARPFYICSVFENYA
+ TCNSNNSLGLQIVDVLISNFNRALKGNFDNPIQIAKAIGKLTINSYIKGVYPIELIYL
+ SEKLTLSKDELSLISMVEDMPYKLFGFKKDPDNIYKGI"
+ gene complement(58813..59001)
+ /locus_tag="SARI_00057"
+ CDS complement(58813..59001)
+ /locus_tag="SARI_00057"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569152.1"
+ /db_xref="GI:161502040"
+ /translation="MNFYIDESGNFSLKNSTWNSVGILAIPHQKEEEIASFVKTLKNK
+ IGIKKDDELKDYFRRDFD"
+ gene complement(59668..60087)
+ /locus_tag="SARI_00058"
+ CDS complement(59668..60087)
+ /locus_tag="SARI_00058"
+ /note="'Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569153.1"
+ /db_xref="GI:161502041"
+ /translation="MTNMDSKKLKRCAQIILFFYGASFLLTFLIGISNLIPPYIYIIF
+ FTPFFVAYCGFSIYLGRKKVFKSLNDSILFSFAPIAMFKPVKILLFKAENINETISNS
+ DKILMCLYLLIAVCSIIKALISLNELYDNLKKPEKNS"
+ gene complement(60099..60446)
+ /locus_tag="SARI_00059"
+ CDS complement(60099..60446)
+ /locus_tag="SARI_00059"
+ /inference="protein motif:HMMPfam:IPR010862"
+ /inference="similar to AA sequence:INSD:AAL21782.1"
+ /note="'COG: NOG11501 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569154.1"
+ /db_xref="GI:161502042"
+ /db_xref="InterPro:IPR010862"
+ /translation="MDILLMDTIQQEVLALFREEIPGYLDSNWKEIPLELDSDLFEVP
+ GDDLHEALDKFERKFNVDLSQVKWSYYFPWENTPLFARWFKLKREDVERTRKPLTIKM
+ FAESAKAGKWLYD"
+ misc_feature complement(60102..60431)
+ /locus_tag="SARI_00059"
+ /note="Protein of unknown function (DUF1493); Region:
+ DUF1493; pfam07377"
+ /db_xref="CDD:219390"
+ gene complement(60431..60880)
+ /locus_tag="SARI_00060"
+ CDS complement(60431..60880)
+ /locus_tag="SARI_00060"
+ /inference="similar to AA sequence:INSD:AAL21781.1"
+ /note="'COG: NOG27628 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569155.1"
+ /db_xref="GI:161502043"
+ /translation="MDTTEELNETYFYHGQSNLSAGELFDVIFLEQFCDELGIGIESG
+ AAILAGQPWLKTRTKPGEAIKGTSVISKYGRMLLRNARTPFGIRVPTPVGVRMRKTNN
+ LAAVIARYVPWLGWVGLVNSIYQVSRKTQAKYNLIARPKDRIQWTSF"
+ gene complement(60890..61372)
+ /locus_tag="SARI_00061"
+ CDS complement(60890..61372)
+ /locus_tag="SARI_00061"
+ /inference="protein motif:HMMPfam:IPR008514"
+ /inference="similar to AA sequence:REFSEQ:ZP_00823859.1"
+ /note="'COG: COG3157 Hemolysin-coregulated protein
+ (uncharacterized);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569156.1"
+ /db_xref="GI:161502044"
+ /db_xref="InterPro:IPR008514"
+ /translation="MAIPGNMWLYDDGGALIKGGCDVADREFSIEFKGFHHNLSIPTD
+ NATGKPTGTRQHSPMIIVKEFDYSSPYLYKAVATGQNLKSAEIKWYKISDAGQEVEYF
+ NMLLEGVRIVSISPTMASPEDKNNNHLESVELRYEKITWKHCDGNIIFTDAWNERQTA
+ "
+ misc_feature complement(60902..61369)
+ /locus_tag="SARI_00061"
+ /note="type VI secretion system effector, Hcp1 family;
+ Region: VI_effect_Hcp1; TIGR03344"
+ /db_xref="CDD:213799"
+ gene complement(61793..62560)
+ /locus_tag="SARI_00062"
+ CDS complement(61793..62560)
+ /locus_tag="SARI_00062"
+ /inference="similar to AA sequence:REFSEQ:ZP_00823810.1"
+ /note="'Psort location: extracellular, including cell
+ wall, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569157.1"
+ /db_xref="GI:161502045"
+ /translation="MNFLSKTVVVVLAATLLSGCDNRPDKTLSPPVGAKWVDVTFRVP
+ EGITLQPAELLYRSAQCKSVRYNSSNEPHDIPGYNDVERPFGAPDGDNIRRLRVAVDG
+ GGSCQWQLNSLKVSFRIADYVPLMKGKEVIDTSYIFDFGDYGLSDGYGTGRAKVFSEK
+ ILDLNTDFFPMVANHIDNTVSLKLFGGETGTEKWRRRFSLSNTQHIAIEPVVHLMKVV
+ VLNPPDHPGNLTATYPDGSREDIPNISPDYDKLLSMK"
+ gene complement(62544..64607)
+ /locus_tag="SARI_00063"
+ CDS complement(62544..64607)
+ /locus_tag="SARI_00063"
+ /inference="protein motif:HMMPfam:IPR002921"
+ /inference="similar to AA sequence:REFSEQ:ZP_00823825.1"
+ /note="'KEGG: pen:PSEEN5483 4.6e-11 lipase K01066;
+ COG: COG3675 Predicted lipase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569158.1"
+ /db_xref="GI:161502046"
+ /db_xref="InterPro:IPR002921"
+ /translation="MEIIGNNTCVTSLRPKYKAVQCRGEQHKYWLELQFVDENNTPVS
+ GLNVRLEYHPLASAKDVEMWRKSGYDYNPTPPPNPPAGVTDSQGVVRFDDLYWIAVDV
+ NTDGQPLADEMEKRPLGLRRNPNSQPVSNNMFRPETRDPKWRSDVQEKAEVAGYIHHY
+ VTIGELCDQLPEIEGWAEPEPPKFHFPPGRSLKGTEIARDALDKRHVIEVCPFRAWVL
+ ALHDTKEYDLANALNLSIMADLVYAAEVKNPTIDYFFRQKCQDLSCLPQLVEYPNYFH
+ MLAVDVPFRERYQPPLYMNTGEGALGEGDTRLFTVECTSHVLVSWCGTDSLLNVQTDV
+ SFGPKRCPAELGGMGDVHGGFLEAYQLPKRKFGDKLDAVKDSLGKRKTLFVCGHSLGG
+ ALALLYAAEMKAFNPVLYTYGMPRTFSRLAAYLLRGIIHYRHANDNDTVTQIPPEVDL
+ DSELYEKLGWLGDKLGFDWVTTSAIGLLPRTFGGNAGVDMGITQERDPYWHHGKTVLF
+ LRAEQSVMRSGERNALWIGGGTVSYTEKAAVKLYLVPALNEECLTSTREHQAAFIQCL
+ APGELEKRFPKGENTASSGWFSKPSNHSMAHRYLPYIHNQVLELADPARDMDRKAMRA
+ MFREGVEQKANFSNPDEVERNREFLALQDMLPVALRLTQAEETGKNALLRFAAVTEEK
+ VELSQ"
+ misc_feature complement(63243..>63704)
+ /locus_tag="SARI_00063"
+ /note="Lipase (class 3). Lipases are esterases that can
+ hydrolyze long-chain acyl-triglycerides into di- and
+ monoglycerides, glycerol, and free fatty acids at a
+ water/lipid interface. A typical feature of lipases is
+ "interfacial activation," the...; Region:
+ Lipase_3; cd00519"
+ /db_xref="CDD:238287"
+ misc_feature complement(order(63603..63629,63633..63638))
+ /locus_tag="SARI_00063"
+ /note="active site flap/lid [active]"
+ /db_xref="CDD:238287"
+ misc_feature complement(63435..63449)
+ /locus_tag="SARI_00063"
+ /note="nucleophilic elbow; other site"
+ /db_xref="CDD:238287"
+ misc_feature complement(order(63291..63293,63441..63443))
+ /locus_tag="SARI_00063"
+ /note="catalytic triad [active]"
+ /db_xref="CDD:238287"
+ gene complement(64680..65543)
+ /locus_tag="SARI_00064"
+ CDS complement(64680..65543)
+ /locus_tag="SARI_00064"
+ /inference="protein motif:HMMPfam:IPR006922"
+ /inference="similar to AA sequence:INSD:"
+ /note="'KEGG: pol:Bpro_3660 5.2e-05 ribonuclease, Rne/Rng
+ family K08300;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569159.1"
+ /db_xref="GI:161502047"
+ /db_xref="InterPro:IPR006922"
+ /translation="MSSHLKMATDVRQKSSEQANATGQLLKQEFDRLGKCVSEALSLS
+ GQKISDDIAARNQELSDALRHHSNGMTEAMQSHRERRDAPGNAPVAVSAHDLAAAGRD
+ VRGRAVAPELENSGEPGRNRGAERHAGEAEREDVGRDVSGGQQRTFSGAAEGYESRSG
+ LDGGEREAERGEAGEGVRADDRAGNAVAERIRAATAGLLAKAGRVGERLRGIADDVWS
+ YARGQRAAERAGHALESAGGALERATESFEPVVQRHKYEVAAARAQVVHEQRQKELVK
+ EREYPGPSLEL"
+ misc_feature complement(65388..65543)
+ /locus_tag="SARI_00064"
+ /note="MbeB-like, N-term conserved region; Region: MbeB_N;
+ pfam04837"
+ /db_xref="CDD:113603"
+ gene complement(65676..66062)
+ /locus_tag="SARI_00065"
+ CDS complement(65676..66062)
+ /locus_tag="SARI_00065"
+ /note="'Psort location: extracellular, including cell
+ wall, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569160.1"
+ /db_xref="GI:161502048"
+ /translation="MFFVLSLFLLSACSLQAEFTPEGENLNDATVGVPYYNQINIFGG
+ IVLSYDIYGKQVIAGDIHPDNLGLHLQYCGDDEFNNCIQIRGIPTKAGIAKVRIHGGL
+ GGGMLSKSGEFDKTYTVTIKDSEGSS"
+ gene complement(66145..67089)
+ /locus_tag="SARI_00066"
+ CDS complement(66145..67089)
+ /locus_tag="SARI_00066"
+ /inference="similar to AA sequence:REFSEQ:ZP_01494838.1"
+ /note="'Psort location: cytoskeletal, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569161.1"
+ /db_xref="GI:161502049"
+ /translation="MTGNINEPLSTIYIMEMKLYRKTMLHTHCVTPVPFTKMYTLEEF
+ ASGKAWSPVKRENPCYFESKGTMKPESQGGETKHIKITVPERPFIAKEYPIGNPRDPF
+ DKNLIERQIDERFNGFDFPNQIAASVCGPAAFFYCLQKDRPDAYAQAARELWRYGKTK
+ IGDLIISPGEGCRHPTGIFYYDDGKPKIAGTDWMTLAGLRDSENTVLSFDALDSPVAG
+ ITMWQTLTEWFEKAGYERIFSNVGITQAGIQGIRDLNKYKEQGYKVVTLINDGLLVNS
+ TNKTTLPTHWVVWDGLVTQDSNGYISLELYSRGKQETG"
+ gene complement(67158..67472)
+ /locus_tag="SARI_00067"
+ CDS complement(67158..67472)
+ /locus_tag="SARI_00067"
+ /inference="similar to AA sequence:REFSEQ:ZP_01494839.1"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569162.1"
+ /db_xref="GI:161502050"
+ /translation="MLCRCPDHYVYGSATQSTSTGTGSLTSRNTSQSPVPAQQAQDSG
+ ARNCIRFQCAGDDGQLMAGCRYTLMFPDGRSEAGVTDEHGVTGWHYAESAKDISLHIL
+ TD"
+ gene 67567..68139
+ /locus_tag="SARI_00068"
+ CDS 67567..68139
+ /locus_tag="SARI_00068"
+ /inference="protein motif:HMMPfam:IPR001207"
+ /inference="similar to AA sequence:REFSEQ:NP_783715.1"
+ /note="'COG: COG3328 Transposase and inactivated
+ derivatives;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569163.1"
+ /db_xref="GI:161502051"
+ /db_xref="InterPro:IPR001207"
+ /translation="MSQPFDFDKALKALQSGQALTGKDGILTPLIKPLTEAALAAELD
+ SHLASDVEANRKNGSGKKTIKAATGSFELATPRDRNGTFEPQLVKKHQTTLSDEIVHK
+ IIRLFALGMSCQDISREIEDLYALSVSTATISAVTDKVIPELKQWQQRPLEKVYPFVR
+ LDAIHYKVREDGAIRCGSFYHDAMGKAVAG"
+ misc_feature 67591..>68091
+ /locus_tag="SARI_00068"
+ /note="Transposase, Mutator family; Region:
+ Transposase_mut; pfam00872"
+ /db_xref="CDD:216166"
+ gene complement(68304..68612)
+ /locus_tag="SARI_00070"
+ CDS complement(68304..68612)
+ /locus_tag="SARI_00070"
+ /note="'Psort location: extracellular, including cell
+ wall, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569164.1"
+ /db_xref="GI:161502053"
+ /translation="MKVASETLKSSDRRGVSIRWNGDNVEFSANINASSMRMDNRHSG
+ GFFHGNLLAHFSMNEGGDDGEITFLNGNKVTTVGSATVPEPCFFTGSYHQKADGCFLR
+ "
+ gene 68451..68774
+ /locus_tag="SARI_00069"
+ CDS 68451..68774
+ /locus_tag="SARI_00069"
+ /inference="similar to AA sequence:INSD:ABL64095.1"
+ /note="'COG: COG3547 Transposase and inactivated
+ derivatives;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569165.1"
+ /db_xref="GI:161502052"
+ /translation="MSKEISMKKSSRMSVIHPHAAGVDIGAEFHVVAVPPDADAAPVR
+ TFQRFTGDLHRMSGWLKTCHITTIAMESTGFYWLPAFEIPEAAGFNVILVNARDAKKC
+ SRSQD"
+ misc_feature 68511..>68753
+ /locus_tag="SARI_00069"
+ /note="Transposase; Region: DEDD_Tnp_IS110; pfam01548"
+ /db_xref="CDD:216564"
+ gene 68535..69810
+ /locus_tag="SARI_00071"
+ /pseudogene="unknown"
+ gene 69922..70074
+ /locus_tag="SARI_00072"
+ CDS 69922..70074
+ /locus_tag="SARI_00072"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569167.1"
+ /db_xref="GI:161502055"
+ /translation="MRGSSQQLQMLEKRFFIANKKAAARRCCIKKQFDKCNVRDKWLT
+ VKVTTL"
+ gene complement(70155..70598)
+ /locus_tag="SARI_00073"
+ CDS complement(70155..70598)
+ /locus_tag="SARI_00073"
+ /inference="protein motif:HMMPfam:IPR006830"
+ /inference="similar to AA sequence:INSD:AAC45074.1"
+ /note="'COG: NOG28130 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569168.1"
+ /db_xref="GI:161502056"
+ /db_xref="InterPro:IPR006830"
+ /translation="MKKFYSCLPVFLLIGCAQVPPPSSGSKPVQQPEVQKEQQANANS
+ IDKCMSLPYVPSDLTENKTLSNQKSENSTSKNNTISSSVFCEKYRQTKEQAFTFFQEY
+ PQYMRSKEDEEQLMTEFKKVLLESGSNNLSIYQTLLTAHKRLQTL"
+ misc_feature complement(70158..70598)
+ /locus_tag="SARI_00073"
+ /note="InvH outer membrane lipoprotein; Region: InvH;
+ pfam04741"
+ /db_xref="CDD:113509"
+ gene 70957..71706
+ /locus_tag="SARI_00074"
+ CDS 70957..71706
+ /locus_tag="SARI_00074"
+ /inference="protein motif:FPrintScan:IPR000005"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR000005"
+ /inference="protein motif:HMMSmart:IPR000005"
+ /inference="protein motif:ScanRegExp:IPR000005"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:REFSEQ:YP_217818.1"
+ /note="'COG: NOG14596 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569169.1"
+ /db_xref="GI:161502057"
+ /db_xref="InterPro:IPR000005"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /translation="MLNTQEVLKEGEKRRVRSPEAWFMQACSAQKLHMSFSEGRHNES
+ CLIQEGALLFIEQAVVAPVSGDLVFRPLKIEVLSKLLAFIDGAGLMNTTYAEPNKWVL
+ LSPEFRAIWQDRKRCEYWFLQQIITPSPDFNKVLTLLRKSESYWLVGYLLAQSTSGST
+ MRMLGEDYGVSYTHFRRLCSRALGGKAKSELRNWRMAQSLLNSVEGHANITQLAVNNG
+ YSSPSHFSNEIKELIGVSPRKLSNIIQLADK"
+ misc_feature 71056..71703
+ /locus_tag="SARI_00074"
+ /note="transcriptional regulator InvF; Provisional;
+ Region: PRK15340"
+ /db_xref="CDD:185240"
+ gene 71703..73394
+ /locus_tag="SARI_00075"
+ CDS 71703..73394
+ /locus_tag="SARI_00075"
+ /inference="protein motif:HMMPfam:IPR004846"
+ /inference="protein motif:HMMPfam:IPR005644"
+ /inference="protein motif:HMMTigr:IPR003522"
+ /inference="protein motif:ScanRegExp:IPR004845"
+ /inference="similar to AA sequence:REFSEQ:NP_461819.1"
+ /note="'COG: COG1450 Type II secretory pathway, component
+ PulD;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569170.1"
+ /db_xref="GI:161502058"
+ /db_xref="InterPro:IPR003522"
+ /db_xref="InterPro:IPR004845"
+ /db_xref="InterPro:IPR004846"
+ /db_xref="InterPro:IPR005644"
+ /translation="MKTHILLARVLACAALVLVAPGYSSEKIPVTGSGFVAKDDSLRT
+ FFDAMALQLKEPVIVSKMAARKKITGNFEFNDPNALLEKLSLQLGLIWYFDGQAIYIY
+ DASEMRNAVVSLRNVSLNEFNNFLKRSGLYNKNYPLRGDNRKGTFYVSGPPVYVDLVV
+ NAATMMDKQNDGIELGRQKIGVMRLNNTFVGDRTYNLRDQKMVIPGIATAIERLLQGE
+ EQPLGNITSSEPVPAMPAFSANGEKSKTANYAGGMSLQEALKQNAAAGDIKIVAYPDT
+ NSLLVKGTAEQVHFIEMLVKALDVAKRHVELSLWIVDLNKSDLERLGASWSGSITIGD
+ KLGVSLNQSSISTLDGSRFIAAVNALEEKKQATVVSRPVLLTQENVPAIFDNNRTFYT
+ KLIGERNVALEHVTYGTMIRVLPRFSADGQIEMSLDIEDGNDTTPQTEITASVDALPE
+ VGRTLISTIARVPHGKSLLVGGYTRDANTDTVQSIPFLGKIPFIGGLFRYSSKNKSNV
+ VRVFLIEPKEIVDPLTPDASESVNNILKQSGTWSGDDKLQKWVRVYLDRGQEAIK"
+ misc_feature 71706..73391
+ /locus_tag="SARI_00075"
+ /note="type III secretion system outer membrane pore InvG;
+ Provisional; Region: PRK15339"
+ /db_xref="CDD:237948"
+ misc_feature 72033..72209
+ /locus_tag="SARI_00075"
+ /note="Bacterial type II/III secretion system short
+ domain; Region: Secretin_N; pfam03958"
+ /db_xref="CDD:217815"
+ misc_feature 72444..72608
+ /locus_tag="SARI_00075"
+ /note="Bacterial type II/III secretion system short
+ domain; Region: Secretin_N; pfam03958"
+ /db_xref="CDD:217815"
+ misc_feature 72777..73265
+ /locus_tag="SARI_00075"
+ /note="Bacterial type II and III secretion system protein;
+ Region: Secretin; pfam00263"
+ /db_xref="CDD:215826"
+ gene 73391..74509
+ /locus_tag="SARI_00076"
+ CDS 73391..74509
+ /locus_tag="SARI_00076"
+ /inference="protein motif:HMMPfam:IPR003520"
+ /inference="protein motif:HMMTigr:IPR013401"
+ /inference="similar to AA sequence:INSD:AAC45044.1"
+ /note="'COG: NOG06182 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569171.1"
+ /db_xref="GI:161502059"
+ /db_xref="InterPro:IPR003520"
+ /db_xref="InterPro:IPR013401"
+ /translation="MIPGSTSGISFSRILSRQTSHQDATQHTDAQQAEIQQAAEDSSP
+ GAEVQKFVQSTDEMSAALAQFRNRRDYEKKSSNLSNSFERVLEDEALPKAKQILKLIS
+ VHGGALEDFLRQARSLFPDPSDLVLVLRELLRRKDLEEIVRKKLESLLKHVEEQTDPR
+ TLKAGINCALKARLFGKTLSLKPGLLRASYRQFIQSESHEVEIYADWIASYGYQRRLV
+ VLDFIEGSLLTDIDANDASCSRLEFGQLLRRLTQLKMLRSADLLFVSTLLSYSFTKAF
+ NAEESSWLLLMLSLLQQPHEVDSLLADIIGLNALLLSHKEHASFLQIFYQVCKAIPSS
+ LFYEEYWQEELLMALRSMTDIAYKHEMAEQRRTIEKPS"
+ misc_feature 73391..74506
+ /locus_tag="SARI_00076"
+ /note="type III secretion system regulator InvE;
+ Provisional; Region: PRK15338"
+ /db_xref="CDD:237947"
+ misc_feature 73511..74200
+ /locus_tag="SARI_00076"
+ /note="type III secretion regulator YopN/LcrE/InvE/MxiC;
+ Region: LcrE; TIGR02568"
+ /db_xref="CDD:233933"
+ gene 74594..76591
+ /locus_tag="SARI_00077"
+ CDS 74594..76591
+ /locus_tag="SARI_00077"
+ /inference="protein motif:HMMPfam:IPR001712"
+ /inference="protein motif:HMMTigr:IPR006302"
+ /inference="protein motif:ScanRegExp:IPR001712"
+ /note="'COG: COG4789 Type III secretory pathway, component
+ EscV;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569172.1"
+ /db_xref="GI:161502060"
+ /db_xref="InterPro:IPR001712"
+ /db_xref="InterPro:IPR006302"
+ /translation="MVMIISMFVIPLPTYLVDFLIALNIVLAILVFMGSFYIDRILSF
+ STFPAVLLITTLFRLALSISTSRLILIEADAGEIIATFGQFVIGDSLAVGFVVFSIVT
+ VVQFIVITKGSERVAEVAARFSLDGMPGKQMSIDADLKAGIIDADAARERRSVLERES
+ QLYGSFDGAMKFIKGDAIAGIIIIFVNFIGGISVGMTRHGMDLSSALSTYTMLTIGDG
+ LVAQIPALLIAISAGFIVTRVNGDSDNMGRNIMTQLLNNPFVLVVTAILTISMGTLPG
+ FPLPVFVILSVVLSVLFYFKFREAKRSAGTPKTSKGEQPLSIEEKEGTSLGLIGDLDK
+ VSTETVPLILLVPKSRREDLEKAQLADRLRSQFFIDYGVRLPEVLLRDGEGLDDNSIV
+ LLINEIRVEQFTVYFDLMRVVNYSDEVVSFGINPTTHQQGSSQYFWVTHEEGEKLREL
+ GYVLRNALDELYHCLAVTLARNVNEYFGIQETKHMLDQLEAKFPDLLKEVLRHATVQR
+ ISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVINLVEHIRGAMARYICHKFANGG
+ ELRAVMVSAEVEDVIRKGIRQTSGSTFLSLEPEASANLMDLITLKLDDLLIAHKDLVL
+ LTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKTI"
+ misc_feature 74594..76588
+ /locus_tag="SARI_00077"
+ /note="Type III secretory pathway, component EscV
+ [Intracellular trafficking and secretion]; Region: EscV;
+ COG4789"
+ /db_xref="CDD:227127"
+ misc_feature 74594..76588
+ /locus_tag="SARI_00077"
+ /note="type III secretion system protein InvA;
+ Provisional; Region: PRK15337"
+ /db_xref="CDD:237946"
+ gene 76615..77022
+ /locus_tag="SARI_00078"
+ CDS 76615..77022
+ /locus_tag="SARI_00078"
+ /inference="protein motif:BlastProDom:IPR003065"
+ /inference="protein motif:FPrintScan:IPR003065"
+ /inference="protein motif:HMMPfam:IPR003065"
+ /inference="similar to AA sequence:INSD:CAD06002.1"
+ /note="'COG: NOG14129 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569173.1"
+ /db_xref="GI:161502061"
+ /db_xref="InterPro:IPR003065"
+ /translation="MQHLDIAELVRSALEVSGCDPSLIGGIDSHSTIVLDLFALPSIC
+ ISVKDDDVWIWAQLGADSMVVLQQRAYEILMTIMEGCQFVRGGQLLLGEQNGELTLKA
+ LVHPDFLSDGEKFSNALNGFYNYLEVFSRSLMR"
+ misc_feature 76615..77019
+ /locus_tag="SARI_00078"
+ /note="type III secretion system chaperone SpaK;
+ Provisional; Region: PRK15336"
+ /db_xref="CDD:185236"
+ gene 77019..78314
+ /locus_tag="SARI_00079"
+ CDS 77019..78314
+ /locus_tag="SARI_00079"
+ /inference="protein motif:HMMPfam:IPR000194"
+ /inference="protein motif:HMMPfam:IPR004100"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR005714"
+ /inference="protein motif:ScanRegExp:IPR000194"
+ /inference="protein motif:superfamily:IPR004100"
+ /inference="similar to AA sequence:INSD:AAL21774.1"
+ /note="Invasion protein InvC; necessary for efficient
+ entry of S.typhimurium into cultured epithelial cells.
+ Probable catalytic subunit of a protein translocase"
+ /codon_start=1
+ /transl_table=11
+ /product="ATP synthase SpaL"
+ /protein_id="YP_001569174.1"
+ /db_xref="GI:161502062"
+ /db_xref="InterPro:IPR000194"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR004100"
+ /db_xref="InterPro:IPR005714"
+ /translation="MKTPRLLQYLAYPQKITGPIIEAELRDVAIGELCEIRRGWHQKQ
+ VVARAQVVGLQRERTVLSLIGNAQGLTRDVVLYPTGRALSAWVGYSVLGAVLDPTGKI
+ VERFTTEVAPISEERVIDVAPPPYASRVGVHEPLITGVRAIDGLLTCGVGQRMGIFAS
+ AGCGKTMLMHMLIEQTEADVFVIGLIGERGREVTEFVDMLRASHKKEKCVLVFATSDF
+ PSVDRCNAAQLATTVAEYFRDQGKRVVLFIDSMTRYARALRDVALASGERPARRGYPA
+ SVFDNLPRLLERPGATGDGSITAFYTVLLESEEEADPMADEIRSILDGHLYLSRKLAG
+ QGHYPAIDVLKSVSRVFGQVTTATHAKQASSVRKLMTRLEELQLFIDLGEYRPGENID
+ NDRAMQMRDSLKAWLCQPVTQYSSFDDTLSGMNAFADQD"
+ misc_feature 77028..78305
+ /locus_tag="SARI_00079"
+ /note="ATP synthase SpaL; Validated; Region: PRK08149"
+ /db_xref="CDD:236166"
+ misc_feature 77061..77258
+ /locus_tag="SARI_00079"
+ /note="ATP synthase alpha/beta family, beta-barrel domain;
+ Region: ATP-synt_ab_N; pfam02874"
+ /db_xref="CDD:217261"
+ misc_feature 77277..78245
+ /locus_tag="SARI_00079"
+ /note="RecA-like NTPases. This family includes the NTP
+ binding domain of F1 and V1 H+ATPases, DnaB and related
+ helicases as well as bacterial RecA and related eukaryotic
+ and archaeal recombinases. This group also includes
+ bacterial conjugation proteins and...; Region:
+ RecA-like_NTPases; cl17233"
+ /db_xref="CDD:247787"
+ misc_feature order(77493..77498,77508..77516)
+ /locus_tag="SARI_00079"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:238540"
+ misc_feature order(77496..77498,77508..77516,77565..77567,77571..77576,
+ 77763..77768)
+ /locus_tag="SARI_00079"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238540"
+ misc_feature 77751..77765
+ /locus_tag="SARI_00079"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:238540"
+ gene 78391..78735
+ /locus_tag="SARI_00080"
+ CDS 78391..78735
+ /locus_tag="SARI_00080"
+ /inference="protein motif:HMMPfam:IPR002954"
+ /inference="similar to AA sequence:INSD:AAC45013.1"
+ /note="'KEGG: bta:282041 0.0055 ROCK2; Rho-associated,
+ coiled-coil containing protein kinase 2 K04514;
+ COG: NOG18535 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569175.1"
+ /db_xref="GI:161502063"
+ /db_xref="InterPro:IPR002954"
+ /translation="MLHAEEEAIVEQIAGLKLLLDTLRAENRQLSREEIYSLLRRQSI
+ VRRQIRDLQLQITQIQEKRCELEKKTQEFQEKSKYWLRKEGNYQRWIVRQKRFYIQRE
+ IQQEEAESEEII"
+ misc_feature <78391..78684
+ /locus_tag="SARI_00080"
+ /note="type III secretion system protein SpaM;
+ Provisional; Region: PRK15335"
+ /db_xref="CDD:185235"
+ gene 78735..79742
+ /locus_tag="SARI_00081"
+ CDS 78735..79742
+ /locus_tag="SARI_00081"
+ /inference="protein motif:HMMPfam:IPR003066"
+ /inference="similar to AA sequence:INSD:AAC45014.1"
+ /note="'COG: NOG19627 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569176.1"
+ /db_xref="GI:161502064"
+ /db_xref="InterPro:IPR003066"
+ /translation="MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSDDKK
+ DREYGDTFMMHKETALPLLLAALRHGAPAKSEQHNGSVSGLHHNVKGELRIAEKLLKV
+ TAEKSVGLVSTEAVDKFAALQSSKNRQLEGVSGKKLSADLKAVESLSELADKAAERTD
+ DNIKVLPGDNKVIAGEGVRKEGALLARDVAPSRMAAANTSKFDDKEHKKIKEASQVPL
+ QPTTIADLSQLSGGDEKMPLAAQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVN
+ IQARQVGEFSLIPSNTQVEHRLHDQWQNGNPQRWHLTRDDQQNPQQQQHGQQSGEEDD
+ A"
+ misc_feature 78735..79739
+ /locus_tag="SARI_00081"
+ /note="antigen presentation protein SpaN; Provisional;
+ Region: PRK15334"
+ /db_xref="CDD:185234"
+ misc_feature 78735..79739
+ /locus_tag="SARI_00081"
+ /note="Surface presentation of antigens protein; Region:
+ SPAN; pfam02510"
+ /db_xref="CDD:145575"
+ gene 79742..80653
+ /locus_tag="SARI_00082"
+ CDS 79742..80653
+ /locus_tag="SARI_00082"
+ /inference="protein motif:BlastProDom:IPR001543"
+ /inference="protein motif:HMMPfam:IPR001543"
+ /inference="protein motif:HMMTigr:IPR013385"
+ /inference="similar to AA sequence:INSD:AAC43944.1"
+ /note="involved in a secretory pathway responsible for the
+ surface presentation of determinants needed for the entry
+ of Salmonella species into mammalian cells"
+ /codon_start=1
+ /transl_table=11
+ /product="surface presentation of antigens protein SpaO"
+ /protein_id="YP_001569177.1"
+ /db_xref="GI:161502065"
+ /db_xref="InterPro:IPR001543"
+ /db_xref="InterPro:IPR013385"
+ /translation="MSLRVRQIDRREWLLTQTAAECQRNGQEVTLEYPSRQGMWVRLS
+ DSEKRWSAWIKPGDWLEHVSPALAGAAVSAGAEHLIVPWLAATERPFELPVPHLSYRR
+ LCVENPVPGSALPEGKLLHIMSDRGGLWFEHLPELPAVGGGRPKTLCWPLRFVIGSSD
+ SPRALLGRIGIGDVLVIRTSSAEVYCYTKKLGHFKRVEGGIIVETLDIQHIEEEKNET
+ ETAEILPGLSQLPVKLEFVLYRKQVTLADLEAIGQQQLLSLPTNAECNVEIMANGVLL
+ GNGELVQMNDTLGVEIHKWLSESGNGE"
+ misc_feature 79742..80650
+ /locus_tag="SARI_00082"
+ /note="type III secretion system protein SpaO; Validated;
+ Region: PRK08158"
+ /db_xref="CDD:181259"
+ misc_feature 80126..80626
+ /locus_tag="SARI_00082"
+ /note="Flagellar motor switch/type III secretory pathway
+ protein [Cell motility and secretion / Intracellular
+ trafficking and secretion]; Region: FliN; COG1886"
+ /db_xref="CDD:224798"
+ gene 80643..81317
+ /gene="spaP"
+ /locus_tag="SARI_00083"
+ CDS 80643..81317
+ /gene="spaP"
+ /locus_tag="SARI_00083"
+ /inference="protein motif:BlastProDom:IPR005838"
+ /inference="protein motif:FPrintScan:IPR005838"
+ /inference="protein motif:HMMPfam:IPR005838"
+ /inference="protein motif:HMMTigr:IPR005773"
+ /inference="protein motif:ScanRegExp:IPR005838"
+ /inference="similar to AA sequence:INSD:AAC43945.1"
+ /note="part of a type III secretory system probably
+ involved in invasion into eukaryotic cells"
+ /codon_start=1
+ /transl_table=11
+ /product="surface presentation of antigens protein SpaP"
+ /protein_id="YP_001569178.1"
+ /db_xref="GI:161502066"
+ /db_xref="InterPro:IPR005773"
+ /db_xref="InterPro:IPR005838"
+ /translation="MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQ
+ QIPSNMTLNGIALLLSMFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDY
+ LIKYSDRELVQFFENAQLKRQYGEETEAVKRDKDEIEKPSIFALLPAYALSEIKSAFK
+ IGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQ
+ YMDIAT"
+ misc_feature 80643..81314
+ /gene="spaP"
+ /locus_tag="SARI_00083"
+ /note="type III secretion system protein SpaP;
+ Provisional; Region: spaP; PRK12796"
+ /db_xref="CDD:237209"
+ gene 81343..81603
+ /locus_tag="SARI_00084"
+ CDS 81343..81603
+ /locus_tag="SARI_00084"
+ /inference="protein motif:FPrintScan:IPR002191"
+ /inference="protein motif:HMMPfam:IPR002191"
+ /inference="protein motif:HMMTigr:IPR006306"
+ /inference="similar to AA sequence:INSD:AAO70352.1"
+ /note="'COG: COG4794 Type III secretory pathway, component
+ EscS;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569179.1"
+ /db_xref="GI:161502067"
+ /db_xref="InterPro:IPR002191"
+ /db_xref="InterPro:IPR006306"
+ /translation="MDDLVFAGNKALYLVLILSGWPTIVATIIGLLVGLFQTVTQLQE
+ QTLPFGIKLLGVCLCLFLLSGWYGEVLLSYGRQVIFLALAKG"
+ misc_feature 81343..81600
+ /locus_tag="SARI_00084"
+ /note="type III secretion system protein SpaQ;
+ Provisional; Region: PRK15333"
+ /db_xref="CDD:185233"
+ gene 81607..82398
+ /locus_tag="SARI_00085"
+ CDS 81607..82398
+ /locus_tag="SARI_00085"
+ /inference="protein motif:FPrintScan:IPR002010"
+ /inference="protein motif:HMMPfam:IPR002010"
+ /inference="protein motif:HMMTigr:IPR006304"
+ /inference="similar to AA sequence:INSD:CAA51926.1"
+ /note="'COG: COG4791 Type III secretory pathway, component
+ EscT;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569180.1"
+ /db_xref="GI:161502068"
+ /db_xref="InterPro:IPR002010"
+ /db_xref="InterPro:IPR006304"
+ /translation="MFYALYFEIHNLVASAAMGFARVAPIFFFLPFLNSGVLSGAPRN
+ AIIVLVAMGVWPHELSEAPPFLSVAMIPLVLQEAAVGVMLGCLLSWPFWVMHALGCII
+ DNQRGATLSSSIDPANGIDTSEMANFLNMFAAVVYLQNGGLVTMVDVLNKSYQLCDPM
+ NECTPSLPPLLTFINQVAQHALVMASPVVLVLLLSEVFLGLLSRFAPQMNAFAISLTV
+ KSGIAILIMLLYFSPVLPDNVLRLSFQATGLSSWFYERGATHVLE"
+ misc_feature 81607..82395
+ /locus_tag="SARI_00085"
+ /note="type III secretion system protein SpaR;
+ Provisional; Region: PRK15332"
+ /db_xref="CDD:185232"
+ gene 82385..83455
+ /locus_tag="SARI_00086"
+ CDS 82385..83455
+ /locus_tag="SARI_00086"
+ /inference="protein motif:FPrintScan:IPR006135"
+ /inference="protein motif:HMMPfam:IPR006135"
+ /inference="protein motif:HMMTigr:IPR006307"
+ /inference="similar to AA sequence:INSD:CAA51927.1"
+ /note="Required for surface presentation of invasion
+ plasmid antigens; required for invasion and for secretion
+ of the three ipa proteins"
+ /codon_start=1
+ /transl_table=11
+ /product="surface presentation of antigens protein SpaS"
+ /protein_id="YP_001569181.1"
+ /db_xref="GI:161502069"
+ /db_xref="InterPro:IPR006135"
+ /db_xref="InterPro:IPR006307"
+ /translation="MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVS
+ YGSFNEFMGIIKIIIAENFEQSMADYSLAVLGVGLKYLIPFMLLCLVCSALPTLLQTG
+ FVLATEALKLNLSALNPVEGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEI
+ FSQLNGNVMGIAVIWRELLLALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKR
+ EMKEQEGNPEVKSKRREVHMEILSEQVKSDIENSRLIVANPTHITIGIYFKPELMPFP
+ MISVYETNQRALAVRSYAEKVGVPVIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLV
+ WLEEVENAGKDVIQPQENEVRH"
+ misc_feature 82388..83452
+ /locus_tag="SARI_00086"
+ /note="type III secretion system protein SpaS; Validated;
+ Region: PRK08156"
+ /db_xref="CDD:236168"
+ gene 83593..84090
+ /locus_tag="SARI_00087"
+ CDS 83593..84090
+ /locus_tag="SARI_00087"
+ /inference="protein motif:Gene3D:IPR011990"
+ /inference="protein motif:HMMPfam:IPR011716"
+ /inference="protein motif:HMMTigr:IPR005415"
+ /inference="similar to AA sequence:INSD:"
+ /note="'COG: COG0457 FOG: TPR repeat;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569182.1"
+ /db_xref="GI:161502070"
+ /db_xref="InterPro:IPR005415"
+ /db_xref="InterPro:IPR011716"
+ /db_xref="InterPro:IPR011990"
+ /translation="MDYQNNVSEERVAEMIWDAVSEGATLKDVHGIPQDMMDGLYAHA
+ YEFYNQGRLDEAETFFRFLCIYDFYNPDYTMGLAAVCQLKKQFQKACDLYAVAFTLLK
+ NDYRPVFFTGQCQLLMRKAAKARQCFELVNERTEDESLRAKALVYLEALKTAETEQHN
+ EQEKE"
+ misc_feature 83593..84087
+ /locus_tag="SARI_00087"
+ /note="chaperone protein SicA; Provisional; Region:
+ PRK15331"
+ /db_xref="CDD:185231"
+ misc_feature 83701..83802
+ /locus_tag="SARI_00087"
+ /note="Tetratricopeptide repeat; Region: TPR_3; pfam07720"
+ /db_xref="CDD:219534"
+ misc_feature 83803..83904
+ /locus_tag="SARI_00087"
+ /note="Tetratricopeptide repeat; Region: TPR_3; pfam07720"
+ /db_xref="CDD:219534"
+ gene 84093..85877
+ /locus_tag="SARI_00088"
+ CDS 84093..85877
+ /locus_tag="SARI_00088"
+ /inference="protein motif:HMMPfam:IPR003895"
+ /inference="similar to AA sequence:INSD:AAO70348.1"
+ /note="'KEGG: pat:Patl_3134 0.0057 ATP-dependent protease
+ La K01338;
+ COG: NOG06175 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569183.1"
+ /db_xref="GI:161502071"
+ /db_xref="InterPro:IPR003895"
+ /translation="MVNDTSSVSRSGYTQNPRLAEAAFEGVRKNTDFLKAADKAFKDV
+ VATKAGDLKAGTKSGETTFNTVGLTPPTDAAREKLSSEGQLTLLLGKLMTLLGDVSLS
+ QLESRLAVWQAMIESQKAMGLQVSKEFQAALGEAEKATDIYEESIKKMDTAKSVYDTA
+ AKKLTQAQNKLQSMDPSDPGYAKAEAAEGQARKEAKDAKTAFDKAKKAADLAGTDAKT
+ KTEQADNILTKFQGTTNVVASQTEVAKGEKDNLSNVARLTMLMAMFIEIVGKNNEEGL
+ QNDLALFNALQEGRQAEMEKKSAEFQEETRKAEETNRIMGCIGKVLGALLTIVSVVAA
+ VFTGGASLALAAVGLAVMVADEIVKAATGVSFIQQALNPIMEHVLKPLMELIGKAITK
+ ALEGLGVDKKTAEMAGSIVGAIVAAIAMVAVIVVVAVVGKGAAAKLGNALSKMMGETI
+ KKLVPNVLKQLAQNGSKLFTQGMQRITSGLGNVGSKMGLQTNALSKELVGNTLNKVAL
+ GMEVTNTAAQSAGGVAEGVFIKNASEAIADFTLARFAMDQIQQWLKQSVEIFGENQKV
+ TAELQKVMSSAVQQNADASRFILRQSRA"
+ misc_feature 84093..85874
+ /locus_tag="SARI_00088"
+ /note="pathogenicity island 1 effector protein SipB;
+ Provisional; Region: PRK15374"
+ /db_xref="CDD:185272"
+ gene 85904..87133
+ /locus_tag="SARI_00089"
+ CDS 85904..87133
+ /locus_tag="SARI_00089"
+ /inference="protein motif:HMMTigr:IPR005427"
+ /inference="similar to AA sequence:SwissProt:Q56020"
+ /note="'COG: NOG10023 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569184.1"
+ /db_xref="GI:161502072"
+ /db_xref="InterPro:IPR005427"
+ /translation="MLINNAGINPATYLNNHSVENTPQPGSQSVSVKDILSSIGITVS
+ KVSDLGLSPTLTAPAPGVLTQTPGTVTSFLKTSIQNADMNQDLNALANNFSNKANELV
+ QTHLREQQAEVGKFFDISGMSSNAVALLAAANVLMLTLNQADTQLSSKLSLVSFDAAK
+ TTASSMMREGMNALSGSISQSALQMGITTVGAKLEYKGLQNERGALKHNAAKIDKLTT
+ ESHSIKNVLNGQNSVKLGSEGVDSLKSLNMKKTGADATKNLNDVTLKSNAGTSATESL
+ GIKDSNKQISPEHQAILSKRLESVESDIRLEQNTMDMTRIDARKMQMTGDLIMKNSVT
+ VGGIAGASGQYAAIQERSEQQISQVNNRVASTASEETRESSRKSTSLIQEMLKAMESI
+ NQSKASAFAAIAGNIRA"
+ misc_feature 85904..87130
+ /locus_tag="SARI_00089"
+ /note="pathogenicity island 1 effector protein SipC;
+ Provisional; Region: PRK15373"
+ /db_xref="CDD:185271"
+ gene 87204..88226
+ /locus_tag="SARI_00090"
+ CDS 87204..88226
+ /locus_tag="SARI_00090"
+ /inference="protein motif:HMMPfam:IPR009483"
+ /inference="protein motif:HMMTigr:IPR013386"
+ /inference="similar to AA sequence:INSD:CAD05990.1"
+ /note="'COG: NOG06173 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569185.1"
+ /db_xref="GI:161502073"
+ /db_xref="InterPro:IPR009483"
+ /db_xref="InterPro:IPR013386"
+ /translation="MLNIQNYSASPRPGLVAERPQTTSASEHVEITAAPATTEHRGAD
+ IITLSQAATKAQQAQQTLRSTLPVSEENNDERTLARQQLTSSLHALTKSGVSLSAEQN
+ EGLRSAFSAPAVALFSTAPMAQPRVTISDAEIWDMVSQNISAIGDNYLGVYENVVAVY
+ TDFYQAFSDILSKMGTWLAPGKDGNTVKLNVDALKSEIRSLVNKYNQVTKNTILFPSQ
+ TGSGVTTATKAEAEQWIKELNLPGSCLKASGSGYVVLVDTGPLNKMVSDLNGIGSGSA
+ LELDNAKYQAWQAGFKAQEENLKTTLQTLTQKYSNANSLYDNLVKVLSSTISSSLETA
+ KSFLQG"
+ misc_feature 87204..88223
+ /locus_tag="SARI_00090"
+ /note="cell invasion protein SipD; Provisional; Region:
+ PRK15330"
+ /db_xref="CDD:185230"
+ gene 88279..90261
+ /locus_tag="SARI_00091"
+ CDS 88279..90261
+ /locus_tag="SARI_00091"
+ /inference="similar to AA sequence:REFSEQ:YP_217801.1"
+ /note="'KEGG: ddi:DDB0184245 5.8e-05 hypothetical protein
+ K03654;
+ COG: NOG06172 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569186.1"
+ /db_xref="GI:161502074"
+ /translation="MMTGLQNEIKAQATNLAANISAVNGNAAKTLSGEIKGPQLEDFP
+ ALVKQSSLEALFKCGKDADALKEIFTSSSNVGAKRAVTEFAELFHSALKATSDSPAAK
+ ELLMKVGKEYTEQIMNDGLKEKSAFGPWTPKTDKAEAKLEILHNKLLDIIKNNIGGDL
+ GNLSTQFVMHEVMPYITNCIEHQFGCTLDPLTRSNIAQLVDKAAKKAVDALDMCHQKL
+ TQEQGTSVGREARHLEMKALIPMLLRNVFAQIPADKLPDPKIPEPAAGPVPDGGKKPE
+ SAGINININIDSSKHSVDNSKHINNSRSHVDNSQHHNDNSNHDNSQRHYESHYSNTSS
+ SVNHSHSRVDANTHQTETAHSASKGILDQGIMGKIDVTAHATAEAVTNASAESSGGKV
+ VTSEKGTTGETASFDEVDGGDNKVIIGKPMQATVHGVAGNKEQIQTADTVNVKTLASQ
+ LPDVEDVKIHTLQPETTVNTGNKAGTTDNDNSQADKAGQFSGLKFKQNGFLSAIPSVT
+ NMRSMHFDARETFLGVIRKALEPDTSTPFPVRRAFDGLRAEILSNDSIKSAALKAQCS
+ DINKHPELKVKIDTLKEAITLHPQREKLAEVALQFAREAGLTKLKGETDYLLSTMLDG
+ IIGDVSWRNGPSFESYLNKPGVDRVITTVDGLHMQS"
+ misc_feature 88291..90258
+ /locus_tag="SARI_00091"
+ /note="pathogenicity island 1 effector protein SipA;
+ Provisional; Region: PRK15376"
+ /db_xref="CDD:185274"
+ gene 90280..90528
+ /locus_tag="SARI_00092"
+ CDS 90280..90528
+ /locus_tag="SARI_00092"
+ /inference="protein motif:BlastProDom:IPR003231"
+ /inference="protein motif:Gene3D:IPR009081"
+ /inference="protein motif:HMMPfam:IPR006163"
+ /inference="protein motif:superfamily:IPR009081"
+ /inference="similar to AA sequence:INSD:AAO70344.1"
+ /note="carries the fatty acid chain in fatty acid
+ biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="acyl carrier protein"
+ /protein_id="YP_001569187.1"
+ /db_xref="GI:161502075"
+ /db_xref="InterPro:IPR003231"
+ /db_xref="InterPro:IPR006163"
+ /db_xref="InterPro:IPR009081"
+ /translation="MDMDIESRVKKVITSCIAVEINSINGQTNLVEDLYADSLDLIDI
+ VFGLSEEFDISCNENDLPDMTTITDICRVVEKSLQSRG"
+ misc_feature 90280..90525
+ /locus_tag="SARI_00092"
+ /note="putative acyl carrier protein IacP; Validated;
+ Region: PRK08172"
+ /db_xref="CDD:181266"
+ gene 90572..90823
+ /locus_tag="SARI_00093"
+ CDS 90572..90823
+ /locus_tag="SARI_00093"
+ /inference="similar to AA sequence:REFSEQ:NP_806483.1"
+ /note="'COG: NOG30285 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569188.1"
+ /db_xref="GI:161502076"
+ /translation="MKIITHVVPGSDMAEIYDDIADNSRLIIKSKLRHVENDPKELLI
+ CVPTRSEWLFYWIKGDKHCARRRAYKNIKHYVSKIKPKN"
+ gene 90858..91250
+ /locus_tag="SARI_00094"
+ CDS 90858..91250
+ /locus_tag="SARI_00094"
+ /inference="protein motif:HMMPfam:IPR010261"
+ /inference="similar to AA sequence:PDB:1JYO"
+ /note="'COG: NOG23656 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569189.1"
+ /db_xref="GI:161502077"
+ /db_xref="InterPro:IPR010261"
+ /translation="MRTHHDIIADIGEELGLPLTFDDNNQCLLLLDTDIFMAIEAKDD
+ IWLLNGMIIPLSPVCGDSVWRQIMMINGELATKNEGTLAYIDTAETLLFIKAITELAN
+ MYHIISQLESFVNQQEALKKRLQEYAKV"
+ misc_feature 90858..91247
+ /locus_tag="SARI_00094"
+ /note="chaperone protein SicP; Provisional; Region:
+ PRK15329"
+ /db_xref="CDD:237945"
+ gene 91300..92142
+ /locus_tag="SARI_00095"
+ CDS 91300..92142
+ /locus_tag="SARI_00095"
+ /inference="protein motif:HMMPfam:IPR003537"
+ /inference="protein motif:superfamily:IPR011070"
+ /inference="similar to AA sequence:INSD:CAD05985.1"
+ /note="'COG: NOG11499 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569190.1"
+ /db_xref="GI:161502078"
+ /db_xref="InterPro:IPR003537"
+ /db_xref="InterPro:IPR011070"
+ /translation="MTSNTRLYIAKENTNEAHVAPEKFASKVLTWLGRVPLFKNIDAV
+ QKHMENTRVQNQKTLQVFLKALTEKYDEKSVNAITLMAGLNDSIKPFTPVRLQQITQM
+ VKDAEESFSKDIRSKQNASLPKVFSLVAKGVETKVTEQNGDFGTGMTQLLLDIALNGV
+ KRAIPQLEKVDGNSLRKNFREMASGNGPLRTLMTNLQNLSLVPEVKQLNDYAINLKNI
+ QVGTAPFSQWGTCGGEVARWIDKASDQELTLAAKKIQVIVEKLKYVATELENIKAGAP
+ MSQR"
+ misc_feature 91357..91602
+ /locus_tag="SARI_00095"
+ /note="SicP binding; Region: SicP-binding; pfam09119"
+ /db_xref="CDD:117677"
+ misc_feature 91741..92085
+ /locus_tag="SARI_00095"
+ /note="GTPase-activating protein (GAP) domain found in
+ bacterial cytotoxins, ExoS, SptP, and YopE. Part of
+ protein secretion system; stimulates Rac1- dependent
+ cytoskeletal changes that promote bacterial
+ internalization; Region: ToxGAP; cd00219"
+ /db_xref="CDD:119405"
+ misc_feature order(91783..91785,91849..91857,91870..91872,91879..91881)
+ /locus_tag="SARI_00095"
+ /note="switch II binding region; other site"
+ /db_xref="CDD:119405"
+ misc_feature order(91852..91854,91867..91869)
+ /locus_tag="SARI_00095"
+ /note="Rac1 P-loop interaction site [polypeptide binding];
+ other site"
+ /db_xref="CDD:119405"
+ misc_feature order(91867..91869,91987..91995)
+ /locus_tag="SARI_00095"
+ /note="GTP binding residues [chemical binding]; other
+ site"
+ /db_xref="CDD:119405"
+ misc_feature order(91867..91869,91879..91881,91978..91980)
+ /locus_tag="SARI_00095"
+ /note="switch I binding region; other site"
+ /db_xref="CDD:119405"
+ gene complement(92471..92953)
+ /locus_tag="SARI_00096"
+ CDS complement(92471..92953)
+ /locus_tag="SARI_00096"
+ /inference="protein motif:HMMPfam:IPR008258"
+ /inference="similar to AA sequence:SwissProt:P43018"
+ /note="'KEGG: bba:Bd1285 1.8e-07 soluble lytic murein
+ transglycosylase K01238;
+ COG: COG0741 Soluble lytic murein transglycosylase and
+ related regulatory proteins (some contain LysM/invasin
+ domains);
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="cell invasion protein"
+ /protein_id="YP_001569191.1"
+ /db_xref="GI:161502079"
+ /db_xref="InterPro:IPR008258"
+ /translation="MRYFFSIVIWLISINTAWADCWLQAEKMFNIESELLYAIAQQES
+ AMKPGAIGHNRDGSTDIGLMQINSSHMKRLKKMGISEKQLLQDPCISVIVGASILSDM
+ MKIYGYSWEAVGAYNAGTSPQRADIRKRYAKKIWENYKKLKEMPAEEKNKKLSIALNK
+ "
+ misc_feature complement(92519..>92917)
+ /locus_tag="SARI_00096"
+ /note="Soluble lytic murein transglycosylase and related
+ regulatory proteins (some contain LysM/invasin domains)
+ [Cell envelope biogenesis, outer membrane]; Region: MltE;
+ COG0741"
+ /db_xref="CDD:223812"
+ misc_feature complement(92534..92854)
+ /locus_tag="SARI_00096"
+ /note="Lytic Transglycosylase (LT) and Goose Egg White
+ Lysozyme (GEWL) domain. Members include the soluble and
+ insoluble membrane-bound LTs in bacteria, the LTs in
+ bacteriophage lambda, as well as, the eukaryotic
+ "goose-type" lysozymes (GEWL). LTs...; Region:
+ LT_GEWL; cd00254"
+ /db_xref="CDD:238157"
+ misc_feature complement(order(92606..92608,92660..92662,92753..92755,
+ 92825..92827))
+ /locus_tag="SARI_00096"
+ /note="N-acetyl-D-glucosamine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:238157"
+ misc_feature complement(92825..92827)
+ /locus_tag="SARI_00096"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:238157"
+ gene complement(92971..94632)
+ /locus_tag="SARI_00097"
+ CDS complement(92971..94632)
+ /locus_tag="SARI_00097"
+ /inference="protein motif:BlastProDom:IPR001867"
+ /inference="protein motif:Gene3D:IPR011990"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR001867"
+ /inference="protein motif:HMMPfam:IPR013105"
+ /inference="similar to AA sequence:REFSEQ:NP_461797.1"
+ /note="Activates the expression of invasion genes and
+ activates the expression of prgHIJK which is part of the
+ pathogenicity island 1 type III secretion system"
+ /codon_start=1
+ /transl_table=11
+ /product="invasion protein regulator"
+ /protein_id="YP_001569192.1"
+ /db_xref="GI:161502080"
+ /db_xref="InterPro:IPR001867"
+ /db_xref="InterPro:IPR011990"
+ /db_xref="InterPro:IPR011991"
+ /db_xref="InterPro:IPR013105"
+ /translation="MLHFNSVPVSNKKFVFDDFILNMDGSLLRADKKVNIPPKEYAVL
+ VILLEAAGEIVSKNTLLDQVWGDAEVNEESLTRCIYALRRILSEDKEHRYIETLYGQG
+ YRFNRPVVVVSPPAPQPTTHTLAILPFQMQDQIQSESLHYSIVKGLSQYAPFGLSVLP
+ VTITKNCRSVKDILELMDQLRPDYYISGQMIPDGNDNVVQIEIVRVKGYNLLHQESIK
+ LVENQPASLLQNKIANLLLRCIPGLRWDTKQVSELNSIDSTMVYLRGKHELNQYTPYS
+ LQQALKLLTQCVNMSPNSIAPYCALAECYLSMAQMGIFDKQNAMIKAKEYAIKATELD
+ HSNPQALGFLGLINTIHSEYIVGSLLFKQANLLSPVSADIKYYYGWNLFMAGQLEEAL
+ QTINECLKLEPTRAAAGITKLWITYYHAGIDDAIRLGDELRSQHLQDNPILLSMQVMF
+ LSLKGKHELARKLAKEISKHEITGLIAVNLLYAEYCQNSERALPAIREFLESEQNTDN
+ NPGLLPLVLVAHGEVIAEKMWNKFKKEDNIWFKRWKQDPRLVKLR"
+ misc_feature complement(92974..94632)
+ /locus_tag="SARI_00097"
+ /note="invasion protein regulator; Provisional; Region:
+ PRK12370"
+ /db_xref="CDD:237080"
+ misc_feature complement(94318..94593)
+ /locus_tag="SARI_00097"
+ /note="Effector domain of response regulator. Bacteria and
+ certain eukaryotes like protozoa and higher plants use
+ two-component signal transduction systems to detect and
+ respond to changes in the environment. The system consists
+ of a sensor histidine kinase and...; Region: trans_reg_C;
+ cd00383"
+ /db_xref="CDD:238225"
+ misc_feature complement(order(94327..94329,94342..94344,94375..94380,
+ 94402..94404,94411..94413,94462..94467,94522..94524))
+ /locus_tag="SARI_00097"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:238225"
+ misc_feature complement(93421..93741)
+ /locus_tag="SARI_00097"
+ /note="Tetratricopeptide repeat domain; typically contains
+ 34 amino acids
+ [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
+ X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
+ a variety of organisms including bacteria, cyanobacteria,
+ yeast, fungi; Region: TPR; cd00189"
+ /db_xref="CDD:238112"
+ misc_feature complement(order(93478..93483,93490..93495,93502..93507,
+ 93583..93588,93595..93600,93604..93609,93721..93726,
+ 93733..93738))
+ /locus_tag="SARI_00097"
+ /note="binding surface"
+ /db_xref="CDD:238112"
+ misc_feature complement(order(93439..93441,93448..93450,93460..93462,
+ 93496..93498,93541..93543,93550..93552,93562..93564,
+ 93598..93600,93643..93645,93652..93654,93664..93666,
+ 93727..93729))
+ /locus_tag="SARI_00097"
+ /note="TPR motif; other site"
+ /db_xref="CDD:238112"
+ gene complement(95733..96662)
+ /locus_tag="SARI_00098"
+ CDS complement(95733..96662)
+ /locus_tag="SARI_00098"
+ /inference="protein motif:FPrintScan:IPR000005"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR000005"
+ /inference="protein motif:HMMSmart:IPR000005"
+ /inference="protein motif:ScanRegExp:IPR000005"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:INSD:AAX66713.1"
+ /note="'KEGG: bli:BL05281 0.0021 adaA;
+ methylphosphotriester-DNA alkyltransferase and
+ transcriptional regulator (AraC/XylS family) K00567;
+ COG: COG2207 AraC-type DNA-binding domain-containing
+ proteins;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569193.1"
+ /db_xref="GI:161502081"
+ /db_xref="InterPro:IPR000005"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /translation="MENVTFVSNSHQRPAADNLQKLKSLLTNTQQQIKSQTQQITIKN
+ LYVSSFTLVCFRSGKVTISNNHDTIYCEEPGMLVLKKEQVVNVTLEEVNGHMDFDILE
+ IPTQRLGDLYALIPNEQQTKMVKPVEKVQKIFYTPDFPARREVFEHLKTAFSCTMDTN
+ KSCNSCNNQSCIENEELIPYFLLFLLTAFLRLPESYEIILSSAQITLKERVYNIISSS
+ PGRQWKLPDIADNIFMSTSTLKRKLAEEGTSFSDIYLSARMNQAAKLLRIGNHNVNSV
+ ALKCGYDSTSYFIQCFKKYFKTTPSTFIKMANH"
+ misc_feature complement(95736..96662)
+ /locus_tag="SARI_00098"
+ /note="transcriptional regulator HilD; Provisional;
+ Region: PRK15185"
+ /db_xref="CDD:185107"
+ misc_feature complement(95748..95855)
+ /locus_tag="SARI_00098"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ gene 96978..98156
+ /locus_tag="SARI_00099"
+ CDS 96978..98156
+ /locus_tag="SARI_00099"
+ /inference="protein motif:HMMTigr:IPR013387"
+ /inference="similar to AA sequence:REFSEQ:YP_151901.1"
+ /note="'COG: NOG07990 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569194.1"
+ /db_xref="GI:161502082"
+ /db_xref="InterPro:IPR013387"
+ /translation="METSKEKTITSPGPYIVRLLNSSLNGCEFPLLTGRTLFVVGHSD
+ ALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDAAEIILHELKEGKAESRPVQLNTP
+ IQVGELLILIRPESEPWAPEQPKSLEASAKKIEPRFKNGIVAALAGLFILGLGTVGTL
+ WILNSPQRQAAELDSLLGQEKERFQVLPGRDKMLYVAAQNERDTLWARQVLARGDYDK
+ NARVINENEENKRISTWLDTYYPQLAYYRLHFDEPRKPVFWLSRQRNNMSKKEIEVLS
+ QKLRTLMPYADSVNITLMDDVTAAGQAEAGLKQQALPYSRRNHKGGVTFVIQGALDDV
+ EILRARQFVDSYYRTWGGRYVQFAIELKDDWLKGRSFQYGAEGYIKMSPGHWYFPSPL
+ "
+ misc_feature 96978..98150
+ /locus_tag="SARI_00099"
+ /note="type III secretion system needle complex protein
+ PrgH; Provisional; Region: PRK15327"
+ /db_xref="CDD:237944"
+ misc_feature 97020..98141
+ /locus_tag="SARI_00099"
+ /note="Type III secretion system protein PrgH-EprH (PrgH);
+ Region: PrgH; pfam09480"
+ /db_xref="CDD:220257"
+ gene 98180..98419
+ /locus_tag="SARI_00100"
+ CDS 98180..98419
+ /locus_tag="SARI_00100"
+ /inference="protein motif:HMMTigr:IPR011841"
+ /inference="protein motif:superfamily:IPR010978"
+ /inference="similar to AA sequence:REFSEQ:NP_457267.1"
+ /note="'COG: NOG13860 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569195.1"
+ /db_xref="GI:161502083"
+ /db_xref="InterPro:IPR010978"
+ /db_xref="InterPro:IPR011841"
+ /translation="MADWSGYLDEVSAKFDKGVDDLQEQVTKALDQLAAKPSDPALLA
+ AYQSKLSEYNLYRNAQSNTVKVFKDIDAAIIQNFR"
+ misc_feature 98189..98416
+ /locus_tag="SARI_00100"
+ /note="type III secretion system needle complex protein
+ PrgI; Provisional; Region: PRK15326"
+ /db_xref="CDD:185226"
+ gene 98438..98743
+ /locus_tag="SARI_00101"
+ CDS 98438..98743
+ /locus_tag="SARI_00101"
+ /inference="similar to AA sequence:REFSEQ:NP_457266.1"
+ /note="'COG: NOG19625 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569196.1"
+ /db_xref="GI:161502084"
+ /translation="MPIATIVPTNAVIGQAVNIRPMETDIVSLDDRLLQAFSGSAIAT
+ AVDKQTITNRIEDPNLVTDPKELAISQEMISDYNLYVSMVSTLTRKGVGAVETLLRS"
+ misc_feature 98501..98740
+ /locus_tag="SARI_00101"
+ /note="type III secretion system needle complex protein
+ PrgJ; Provisional; Region: PRK15325"
+ /db_xref="CDD:185225"
+ gene 98740..99498
+ /locus_tag="SARI_00102"
+ CDS 98740..99498
+ /locus_tag="SARI_00102"
+ /inference="protein motif:HMMPfam:IPR006182"
+ /inference="protein motif:HMMTigr:IPR003282"
+ /inference="similar to AA sequence:SwissProt:P41786"
+ /note="'COG: COG4669 Type III secretory pathway,
+ lipoprotein EscJ;
+ Psort location: golgi, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569197.1"
+ /db_xref="GI:161502085"
+ /db_xref="InterPro:IPR003282"
+ /db_xref="InterPro:IPR006182"
+ /translation="MIRRYLYTFLLVMTLAGCKDKDLLKGLDQEQANEVIAVLQMHNI
+ EANKIDSGKLGYSITVAEPDFTAAVYWIKTYQLPPRPRVEIAQMFPADSLVSSPRAEK
+ ARLYSAIEQRLEQSLQTMEGVLSARVHISYDIDAGENGRPPKPVHLSALAVYERGSPL
+ AHQISDIKRFLKNSFADVDYDNISVVLSERSDAQLQAPGTPVKRDSFATSWIVLIILL
+ SAMLAGFGIWYYKNHYARNKKGITADDKAKSSNE"
+ misc_feature 98740..99495
+ /locus_tag="SARI_00102"
+ /note="type III secretion system lipoprotein PrgK;
+ Provisional; Region: PRK15324"
+ /db_xref="CDD:185224"
+ gene 99491..100069
+ /locus_tag="SARI_00103"
+ CDS 99491..100069
+ /locus_tag="SARI_00103"
+ /inference="protein motif:HMMTigr:IPR013388"
+ /inference="similar to AA sequence:INSD:AAL21750.1"
+ /note="'COG: NOG14693 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569198.1"
+ /db_xref="GI:161502086"
+ /db_xref="InterPro:IPR013388"
+ /translation="MNRQPLSVIWQKVIFDPLSYIHPQRLQITSEMIDRPAARAAANE
+ LILAACQLKTGEKENIQNSLTQLWLRQWHRLPQIAYLLGCYKLRADLARQGALLGLPD
+ WAQAFLAMNQGTSLSVCDKAPNHRFLLSVGYAQLNALSEFLPESLAQRFPLLFPPFIE
+ EASKQDAVEMSILLLALQYAQKYPNSVPAFAC"
+ misc_feature 99518..100066
+ /locus_tag="SARI_00103"
+ /note="type III secretion apparatus protein OrgA/MxiK;
+ Region: OrgA_MxiK; TIGR02555"
+ /db_xref="CDD:131606"
+ misc_feature 99566..100066
+ /locus_tag="SARI_00103"
+ /note="invasion protein OrgA; Provisional; Region:
+ PRK15323"
+ /db_xref="CDD:185223"
+ gene 100026..100697
+ /locus_tag="SARI_00104"
+ CDS 100026..100697
+ /locus_tag="SARI_00104"
+ /inference="similar to AA sequence:REFSEQ:YP_217788.1"
+ /note="'COG: NOG14128 non supervised orthologous group;
+ Psort location: cytoskeletal, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569199.1"
+ /db_xref="GI:161502087"
+ /translation="MLKNIPIPSPLSPVEGILIKRKTLERYFSIERLEQQAHQRAKRI
+ LREAEEEARTLRMYAYQEGYEQGMVDALQQVAAYLTDSQTMAWKWMEKIQIYARELFS
+ AAVDHPETLLTVLDEWLRDFDKPEGQLFLTLPVNAKKDHQKLMVLLMENWPGTFNLKY
+ HQEQRFIMSCGDQIAEFSPEQFVETAVGVIKHHLDELPQDCRTISDNAINSLIDEWQT
+ KTQTS"
+ misc_feature 100074..100688
+ /locus_tag="SARI_00104"
+ /note="invasion protein OrgB; Provisional; Region:
+ PRK15322"
+ /db_xref="CDD:185222"
+ gene 100712..101170
+ /locus_tag="SARI_00105"
+ CDS 100712..101170
+ /locus_tag="SARI_00105"
+ /inference="similar to AA sequence:REFSEQ:YP_151895.1"
+ /note="'COG: NOG23015 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569200.1"
+ /db_xref="GI:161502088"
+ /translation="MIPGTISTSYLDPTVSTEATSNSVVSLNARAVTLNNANNAHLSN
+ GSNVDLYDAFYQTLLSLPELVSSEALKDTIYQEMNAFKDPKNGEPAFVSFEQQTAMLQ
+ NIIGKVEPDTHLYEALNGVLVGTMNAQSQMTSWMQEVILSGGENNESIDW"
+ misc_feature 100808..101167
+ /locus_tag="SARI_00105"
+ /note="putative type III secretion system effector protein
+ OrgC; Provisional; Region: PRK15321"
+ /db_xref="CDD:185221"
+ gene 101533..102405
+ /locus_tag="SARI_00106"
+ CDS 101533..102405
+ /locus_tag="SARI_00106"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR000005"
+ /inference="protein motif:HMMSmart:IPR000005"
+ /inference="protein motif:ScanRegExp:IPR000005"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:REFSEQ:YP_217786.1"
+ /note="'COG: COG2207 AraC-type DNA-binding
+ domain-containing proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569201.1"
+ /db_xref="GI:161502089"
+ /db_xref="InterPro:IPR000005"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /translation="MNKSVGAISNNYLQQSSKASLINGLADVRGYYVANCLLIKLNKG
+ SLRIENEFGEFIEQSAPCLFLLEKDQTITFSMSEIEGHIDFSSLEVSYDLMQKFYKVF
+ YSTINYNDRELSLKTKPKHFFHAELLPGMSDTFDSILNGVTCPRVCSNVSIDDHDYSY
+ YSLMYLISAFVRKPGGFDFLERAIKITTKEKVYNIIISDITRKWSQAEVAGKLFMSVS
+ SLKRKLAAEDVSFSKIYLDARMNQAIKLLRMGAGNISQVATMCGYDTPSYFIAIFKRH
+ FKITPLSFMRTINH"
+ misc_feature 101533..102402
+ /locus_tag="SARI_00106"
+ /note="transcriptional regulator SirC; Provisional;
+ Region: PRK15044"
+ /db_xref="CDD:185004"
+ misc_feature <102289..102390
+ /locus_tag="SARI_00106"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ gene 102786..103541
+ /locus_tag="SARI_00107"
+ CDS 102786..103541
+ /locus_tag="SARI_00107"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="similar to AA sequence:INSD:CAD05973.1"
+ /note="'COG: NOG25264 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569202.1"
+ /db_xref="GI:161502090"
+ /db_xref="InterPro:IPR011991"
+ /translation="MKNVIIYGINWTNCYALESIFKQKYPEKRVKTCNSLTALLHSIS
+ AMPDAGLILSLNPHEHVYLFHALQSRLQSRKVLVVADRLYYIDRCVLQYFGVMDYVLK
+ DELSCIIRPDREKPRLPEAWLRFCHRPHRKTVATTYAFNVNETPEEVLFNINQYAWWN
+ LPPGVTQAKYALLILLSSGHPAIELAKKFGLGTKTVSIYRKKMMHRLGMDSSPLSLFR
+ GLKLDAHLQRTTVAHNRSVQDDNCPLPVAVGMN"
+ misc_feature 102786..103538
+ /locus_tag="SARI_00107"
+ /note="transcriptional activator SprB; Provisional;
+ Region: PRK15320"
+ /db_xref="CDD:185220"
+ misc_feature 103269..103460
+ /locus_tag="SARI_00107"
+ /note="DNA-binding HTH domain-containing proteins
+ [Transcription]; Region: CsgD; COG2771"
+ /db_xref="CDD:225360"
+ gene complement(103823..104671)
+ /locus_tag="SARI_00108"
+ CDS complement(103823..104671)
+ /locus_tag="SARI_00108"
+ /inference="protein motif:HMMPfam:IPR001626"
+ /inference="similar to AA sequence:INSD:AAL21744.1"
+ /note="'COG: COG1108 ABC-type Mn2+/Zn2+ transport systems,
+ permease components;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569203.1"
+ /db_xref="GI:161502091"
+ /db_xref="InterPro:IPR001626"
+ /translation="MFLTTLLEPFQFDFMVNALMVSVIVSIPCALLSVFLVLKGWALM
+ GDAMSHAVFPGVVLAYIVGIPLAIGAFIAGLFCAIATGYLDENSRIKRDTVMGIVFSG
+ MFGAGLVLYVSIQSEVHLDHILFGDMLGVSLGDIMQTAIIALGIALIIGLKWKDLLLY
+ AFDPHQAKACGLNTTLLHYGLLCMIALTIVATLKSVGIILSISLLIAPGAIAILLTRR
+ FARALGLAVSLSVITAFAGVYLSFYFDSAPAPTIVVLFAIVFIAAFIYSTWRDRRNEV
+ VPEAHG"
+ misc_feature complement(103850..104656)
+ /locus_tag="SARI_00108"
+ /note="ABC-type Mn2+/Zn2+ transport systems, permease
+ components [Inorganic ion transport and metabolism];
+ Region: ZnuB; COG1108"
+ /db_xref="CDD:224033"
+ misc_feature complement(103880..104629)
+ /locus_tag="SARI_00108"
+ /note="Transmembrane subunit (TM), of Periplasmic Binding
+ Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters involved in the uptake of siderophores, heme,
+ vitamin B12, or the divalent cations Mg2+ and Zn2+.
+ PBP-dependent ABC transporters consist of...; Region:
+ TM_ABC_iron-siderophores_like; cd06550"
+ /db_xref="CDD:119348"
+ misc_feature complement(order(104015..104017,104036..104038,
+ 104162..104170,104174..104191,104195..104200,
+ 104204..104212,104216..104221,104555..104563,
+ 104573..104575))
+ /locus_tag="SARI_00108"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119348"
+ misc_feature complement(order(103880..103882,103889..103894,
+ 103901..103903,103910..103915,103922..103924,
+ 104066..104068,104297..104299,104306..104311,
+ 104342..104347,104354..104356,104363..104368,
+ 104375..104380,104387..104392,104396..104398,
+ 104537..104539,104552..104554,104558..104560))
+ /locus_tag="SARI_00108"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119348"
+ misc_feature complement(order(103931..103933,103946..103948,
+ 104078..104080,104093..104095,104267..104269))
+ /locus_tag="SARI_00108"
+ /note="putative PBP binding regions; other site"
+ /db_xref="CDD:119348"
+ gene complement(104662..105522)
+ /locus_tag="SARI_00109"
+ CDS complement(104662..105522)
+ /locus_tag="SARI_00109"
+ /inference="protein motif:HMMPfam:IPR001626"
+ /inference="similar to AA sequence:INSD:AAV78578.1"
+ /note="'COG: COG1108 ABC-type Mn2+/Zn2+ transport systems,
+ permease components;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569204.1"
+ /db_xref="GI:161502092"
+ /db_xref="InterPro:IPR001626"
+ /translation="MNWLVEPFGYQYMLNAMWVSAMVGGLCAFLSCYLMLKGWSLIGD
+ ALSHSIVPGVAGAWMLGLPFSLGAFLSGGLAAGSMLFLNQRSRLKEDAIIGLIFSSFF
+ GVGLFMVSLNPMSVNIQTIILGNVLAIAPADIVQLAIIGVVSLTILLLKWKDLMVVFF
+ DETHARSIGLNPGLLKLLFFTLLSVSTVAALQTVGAFLVICLVVTPGATAWLLTDRFP
+ RLLVIAVMIGSLTSFLGAWLSYWLDGATGGIIVVMQTLLFITAFIFAPKHGLLANRRR
+ ARLHKEPSCS"
+ misc_feature complement(104707..105522)
+ /locus_tag="SARI_00109"
+ /note="ABC-type Mn2+/Zn2+ transport systems, permease
+ components [Inorganic ion transport and metabolism];
+ Region: ZnuB; COG1108"
+ /db_xref="CDD:224033"
+ misc_feature complement(104746..105486)
+ /locus_tag="SARI_00109"
+ /note="Transmembrane subunit (TM), of Periplasmic Binding
+ Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters involved in the uptake of siderophores, heme,
+ vitamin B12, or the divalent cations Mg2+ and Zn2+.
+ PBP-dependent ABC transporters consist of...; Region:
+ TM_ABC_iron-siderophores_like; cd06550"
+ /db_xref="CDD:119348"
+ misc_feature complement(order(104872..104874,104893..104895,
+ 105019..105027,105031..105048,105052..105057,
+ 105061..105069,105073..105078,105412..105420,
+ 105430..105432))
+ /locus_tag="SARI_00109"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119348"
+ misc_feature complement(order(104746..104751,104758..104760,
+ 104767..104772,104779..104781,104926..104928,
+ 105154..105156,105163..105168,105193..105195,
+ 105199..105204,105211..105213,105220..105225,
+ 105232..105237,105244..105249,105253..105255,
+ 105394..105396,105409..105411,105415..105417))
+ /locus_tag="SARI_00109"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119348"
+ misc_feature complement(order(104788..104790,104803..104805,
+ 104938..104940,104950..104952,105124..105126,
+ 105193..105195))
+ /locus_tag="SARI_00109"
+ /note="putative PBP binding regions; other site"
+ /db_xref="CDD:119348"
+ gene complement(105519..106340)
+ /locus_tag="SARI_00110"
+ CDS complement(105519..106340)
+ /locus_tag="SARI_00110"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:INSD:AAL21742.1"
+ /note="'KEGG: rru:Rru_A2894 2.6e-85 ABC transporter
+ component K02074;
+ COG: COG1121 ABC-type Mn/Zn transport systems, ATPase
+ component;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569205.1"
+ /db_xref="GI:161502093"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MSQSAITVDQVTVTYRNGHTALRDATFQVPGGTIAALVGVNGSG
+ KSTLFKALMGFVHLAQGDITILQQSVNTALKKNLIAYVPQSEEVDWSFPVLVEDVVMM
+ GRYGHMGWLRRPTAHDHACVDAALARVDMQEYRHRQIGELSGGQKKRVFLARAIAQDG
+ QVILLDEPFTGVDVKTEARIIDLLRELRDEGRTMLVSTHNLGSVTEFCDYTVMIKGTV
+ LASGPTETTFTAANLEQAFSGVLRHIALSGGEEHIITDDERPFISRRVASGGKSS"
+ misc_feature complement(105528..106340)
+ /locus_tag="SARI_00110"
+ /note="manganese/iron transporter ATP-binding protein;
+ Provisional; Region: PRK15056"
+ /db_xref="CDD:185016"
+ misc_feature complement(105675..106319)
+ /locus_tag="SARI_00110"
+ /note="ATP-binding cassette domain of the metal-type
+ transporters; Region: ABC_Metallic_Cations; cd03235"
+ /db_xref="CDD:213202"
+ gene complement(106337..107254)
+ /locus_tag="SARI_00111"
+ CDS complement(106337..107254)
+ /locus_tag="SARI_00111"
+ /inference="protein motif:HMMPfam:IPR006127"
+ /inference="similar to AA sequence:INSD:AAL21741.1"
+ /note="'COG: COG0803 ABC-type metal ion transport system,
+ periplasmic component/surface adhesin;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569206.1"
+ /db_xref="GI:161502094"
+ /db_xref="InterPro:IPR006127"
+ /translation="MTNLRRLKTLLIVGIVAMLALSSAYAKEKFKVITTFTVIADMAK
+ NVAGDAAEVSSITKPGAEIHEYQPTPGDIKRAQGAQLILANGLNLERWFARFYQHLSG
+ VPEVVVSTGVKPMGITEGPYNGKPNPHAWMSAENALIYVDNIRDALVKYDPDNAEIYK
+ QNAERYKAKIRQLADPLRAELEKIPADQRWLVTSEGAFSYLARDNNMKELYLWPINAD
+ QQGTPKQVRKVIDTIKKHHIPAIFSESTVSDKPARQVAREAGAHYGGVLYVDSLSAAD
+ GPVPTYLDLLRVTTETIVKGINDGLRSQQ"
+ misc_feature complement(106361..107242)
+ /locus_tag="SARI_00111"
+ /note="ABC-type metal ion transport system, periplasmic
+ component/surface adhesin [Inorganic ion transport and
+ metabolism]; Region: LraI; COG0803"
+ /db_xref="CDD:223874"
+ misc_feature complement(106361..107206)
+ /locus_tag="SARI_00111"
+ /note="Metal binding protein PsaA. These proteins have
+ been shown to function as initial receptors in ABC
+ transport of Mn2+ and as surface adhesins in some
+ eubacterial species. They belong to the TroA superfamily
+ of periplasmic metal binding proteins that...; Region:
+ PsaA; cd01137"
+ /db_xref="CDD:238557"
+ misc_feature complement(order(106445..106447,106670..106672,
+ 106868..106870,107063..107065))
+ /locus_tag="SARI_00111"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:238557"
+ gene 107436..107780
+ /locus_tag="SARI_00112"
+ CDS 107436..107780
+ /locus_tag="SARI_00112"
+ /inference="similar to AA sequence:INSD:AAL21740.1"
+ /note="'COG: NOG16835 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569207.1"
+ /db_xref="GI:161502095"
+ /translation="MSGNRIAREKLTIKKMIALYASRCPQASNDEAHYDALFSYAQKR
+ LDKCVFGEDKPACKQCPVHCYQPTRREEMKQIMRWAGPRMLWRHPVLTVRHFIDDKRP
+ VPELPEKYQRKK"
+ misc_feature 107442..107771
+ /locus_tag="SARI_00112"
+ /note="Nitrous oxide-stimulated promoter; Region: YgbA_NO;
+ pfam11756"
+ /db_xref="CDD:221209"
+ gene complement(107856..109919)
+ /locus_tag="SARI_00113"
+ CDS complement(107856..109919)
+ /locus_tag="SARI_00113"
+ /inference="protein motif:FPrintScan:IPR002197"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR002078"
+ /inference="protein motif:HMMPfam:IPR002197"
+ /inference="protein motif:HMMPfam:IPR003018"
+ /inference="protein motif:HMMSmart:IPR003018"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR002078"
+ /note="'KEGG: eci:UTI89_C3094 0. fhlA; formate
+ hydrogenlyase transcriptional activator K01768;
+ COG: COG3604 Transcriptional regulator containing GAF,
+ AAA-type ATPase, and DNA binding domains;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569208.1"
+ /db_xref="GI:161502096"
+ /db_xref="InterPro:IPR002078"
+ /db_xref="InterPro:IPR002197"
+ /db_xref="InterPro:IPR003018"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR012287"
+ /translation="MSDLGQQGLFDITRTLLQQPDLASLSEALSQLVKRSALADSAGI
+ VLWQAQSQRAQYYATRENGRPVEYEDETVLAHGPVRRILSRPDALHCNFHEFTETWPQ
+ LATSGLYPEFGHYCLLPLAAEGRIFGGCEFIRQEDRPWSEKEYDRLHTFTQIVGVVAE
+ QIQNRVNNNVDYDLLCRERDNFRILVAITNAVLSRLDIDELVSEVAKEIHHYFNIDAI
+ SIVLRSHRKNKLNIYSTHYLDERHPAHEQSEVDEAGTLTERVFKSKEMLLINLNERDP
+ LAPYERMLFDTWGNQIQTLCLLPLMSGNTMLGVLKLAQCEEKVFTTANLKLLRQIAER
+ VAIAVDNALAYQEIHRLKERLVDENLALTEQLNNVDSEFGEIIGRSEAMYNVLKQVEM
+ VAQSDSTVLILGETGTGKELIARAIHNLSGRSGRRMVKMNCAAMPAGLLESDLFGHER
+ GAFTGASAQRIGRFELADKSSLFLDEVGDMPLELQPKLLRVLQEQEFERLGSNKLIQT
+ DVRLIAATNRDLKKMVADREFRNDLYYRLNVFPIQLPPLRERPEDIPLLVKAFTFKIA
+ RRMGRNIDSIPAETLRTLSGMEWPGNVRELENVVERAVLLTRGNVLQLSLPDIAAVTP
+ DTPPVATEIAKEGEDEYQLIVRVLKETNGVVAGPKGAAQRLGLKRTTLLSRMKRLGID
+ KDALA"
+ misc_feature complement(107868..109919)
+ /locus_tag="SARI_00113"
+ /note="formate hydrogenlyase transcriptional activator
+ FhlA; Provisional; Region: PRK15429"
+ /db_xref="CDD:237965"
+ misc_feature complement(109431..109859)
+ /locus_tag="SARI_00113"
+ /note="Domain present in phytochromes and cGMP-specific
+ phosphodiesterases; Region: GAF; smart00065"
+ /db_xref="CDD:214500"
+ misc_feature complement(108873..109331)
+ /locus_tag="SARI_00113"
+ /note="Domain present in phytochromes and cGMP-specific
+ phosphodiesterases; Region: GAF; smart00065"
+ /db_xref="CDD:214500"
+ misc_feature complement(108306..108779)
+ /locus_tag="SARI_00113"
+ /note="The AAA+ (ATPases Associated with a wide variety of
+ cellular Activities) superfamily represents an ancient
+ group of ATPases belonging to the ASCE (for additional
+ strand, catalytic E) division of the P-loop NTPase fold.
+ The ASCE division also includes ABC; Region: AAA; cd00009"
+ /db_xref="CDD:99707"
+ misc_feature complement(108687..108710)
+ /locus_tag="SARI_00113"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(order(108369..108371,108495..108497,
+ 108684..108707))
+ /locus_tag="SARI_00113"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(108492..108509)
+ /locus_tag="SARI_00113"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(108312..108314)
+ /locus_tag="SARI_00113"
+ /note="arginine finger; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(107883..108002)
+ /locus_tag="SARI_00113"
+ /note="Bacterial regulatory protein, Fis family; Region:
+ HTH_8; cl17420"
+ /db_xref="CDD:247974"
+ unsure 109580..109591
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(110081..111091)
+ /locus_tag="SARI_00114"
+ CDS complement(110081..111091)
+ /locus_tag="SARI_00114"
+ /inference="protein motif:HMMPfam:IPR000728"
+ /inference="protein motif:HMMPfam:IPR010918"
+ /inference="protein motif:HMMPIR:IPR011854"
+ /inference="protein motif:HMMTigr:IPR011854"
+ /inference="similar to AA sequence:INSD:AAX66697.1"
+ /note="'KEGG: cch:Cag_0556 1.7e-81 hypE; hydrogenase
+ expression/formation protein HypE K04655;
+ COG: COG0309 Hydrogenase maturation factor;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569209.1"
+ /db_xref="GI:161502097"
+ /db_xref="InterPro:IPR000728"
+ /db_xref="InterPro:IPR010918"
+ /db_xref="InterPro:IPR011854"
+ /translation="MNNIQLAHGSGGQAMQQLINSLFMEAFANPWLAEQEDQARLDLA
+ PLTAEGDRLAFSTDSYVIDPLFFPGGNIGKLAICGTANDVAVSGAIPRYLSCGFILEE
+ GLPMETLKNVVNSMAATAREAGIAIVTGDTKVVQRGAADKLFINTAGMGAIPADIRWG
+ AQTLSAGDVLLVSGTLGDHGATILNLREQLGLDGELASDCAVLTPLIQTLRHINGVKA
+ LRDATRGGVNAVAHEFAAACGFGIELSESALPLKPAVRGVCELLGLDALNFANEGKLV
+ IAVERQAAEQALAALRAHPLGSDAALIGEVVERKGVRLAGLYGVKRTLDLPHAEPLPR
+ IC"
+ misc_feature complement(110174..111064)
+ /locus_tag="SARI_00114"
+ /note="HypE (Hydrogenase expression/formation protein).
+ HypE is involved in Ni-Fe hydrogenase biosynthesis. HypE
+ dehydrates its own carbamoyl moiety in an ATP-dependent
+ process to yield the enzyme thiocyanate. The N-terminal
+ domain of HypE is related to the...; Region: HypE;
+ cd02197"
+ /db_xref="CDD:100033"
+ misc_feature complement(order(110420..110422,110429..110434,
+ 110654..110656,110660..110662,110678..110680,
+ 110684..110686,110693..110695,110699..110701,
+ 110807..110809,110843..110845,110915..110920,
+ 110924..110941,111044..111052))
+ /locus_tag="SARI_00114"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:100033"
+ misc_feature complement(110084..111049)
+ /locus_tag="SARI_00114"
+ /note="hydrogenase expression/formation protein HypE;
+ Region: hypE; TIGR02124"
+ /db_xref="CDD:233738"
+ misc_feature complement(order(110420..110425,110843..110845,
+ 110918..110920))
+ /locus_tag="SARI_00114"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:100033"
+ gene complement(111088..112209)
+ /locus_tag="SARI_00115"
+ CDS complement(111088..112209)
+ /locus_tag="SARI_00115"
+ /inference="protein motif:HMMPfam:IPR002780"
+ /inference="protein motif:HMMPIR:IPR002780"
+ /inference="protein motif:HMMTigr:IPR002780"
+ /inference="similar to AA sequence:INSD:AAX66696.1"
+ /note="'COG: COG0409 Hydrogenase maturation factor;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569210.1"
+ /db_xref="GI:161502098"
+ /db_xref="InterPro:IPR002780"
+ /translation="MRFVDEYRAPEQVMQLIERLRKRAAHLPYTAERPLRIMEVCGGH
+ THAIFKFGLDQLLPENVEFIHGPGCPVCVLPMGRIDSCVEIASHPEVIFCTFGDAMRV
+ PGKQGSLLQAKARGADVRIVYSPMDALKLAQDNPTRKVVFFGLGFETTMPTTAITLQQ
+ AKQRDVRNFYFFCQHITLIPTLRSLLEQPDNGIDAFLAPGHVSMVIGTEAYQFIAADF
+ NRPLVVAGFEPLDLLQGVMMLVEQKIAALSQVENQYRRVVPDAGNMLAQQAIADVFCV
+ NGDSEWRGLGVIESSGVHLTPEYQRFDAEAHFRPAPQQVYDDPRARCGEVLTGRCKPH
+ QCPLFGKTCNPETAFGALMVSSEGACAAWYQYRQQECEV"
+ misc_feature complement(111100..112209)
+ /locus_tag="SARI_00115"
+ /note="hydrogenase isoenzymes formation protein HypD;
+ Provisional; Region: PRK15062"
+ /db_xref="CDD:237892"
+ misc_feature complement(111103..112206)
+ /locus_tag="SARI_00115"
+ /note="hydrogenase expression/formation protein HypD;
+ Region: hypD; TIGR00075"
+ /db_xref="CDD:232812"
+ gene complement(112209..112481)
+ /locus_tag="SARI_00116"
+ CDS complement(112209..112481)
+ /locus_tag="SARI_00116"
+ /inference="protein motif:BlastProDom:IPR001109"
+ /inference="protein motif:FPrintScan:IPR001109"
+ /inference="protein motif:HMMPfam:IPR001109"
+ /inference="protein motif:HMMPIR:IPR001109"
+ /inference="protein motif:HMMTigr:IPR001109"
+ /inference="protein motif:ScanRegExp:IPR001109"
+ /inference="protein motif:superfamily:IPR008994"
+ /inference="similar to AA sequence:INSD:CAD05963.1"
+ /note="'HypC; accessory protein necessary for maturation
+ of the hydrogenase isoforms 1, 2 and 3; forms a complex
+ with HypD, HypE, and HypF proteins, which is the site of
+ ligand biosynthesis and attachment to the iron atom of the
+ NiFe site in the hydrogenase'"
+ /codon_start=1
+ /transl_table=11
+ /product="hydrogenase assembly chaperone"
+ /protein_id="YP_001569211.1"
+ /db_xref="GI:161502099"
+ /db_xref="InterPro:IPR001109"
+ /db_xref="InterPro:IPR008994"
+ /translation="MCIGVPGQIRAIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRL
+ GQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGALLYGEER"
+ misc_feature complement(112212..112481)
+ /locus_tag="SARI_00116"
+ /note="hydrogenase assembly chaperone; Provisional;
+ Region: PRK10409"
+ /db_xref="CDD:182435"
+ gene complement(112472..113344)
+ /locus_tag="SARI_00117"
+ CDS complement(112472..113344)
+ /locus_tag="SARI_00117"
+ /inference="protein motif:HMMPfam:IPR003495"
+ /inference="protein motif:HMMPIR:IPR012202"
+ /inference="protein motif:HMMTigr:IPR004392"
+ /inference="similar to AA sequence:INSD:AAL21735.1"
+ /note="GTP hydrolase involved in nickel liganding into
+ hydrogenases"
+ /codon_start=1
+ /transl_table=11
+ /product="hydrogenase nickel incorporation protein HypB"
+ /protein_id="YP_001569212.1"
+ /db_xref="GI:161502100"
+ /db_xref="InterPro:IPR003495"
+ /db_xref="InterPro:IPR004392"
+ /db_xref="InterPro:IPR012202"
+ /translation="MCTTCGCAEGNLYIEGDEHNPHSAFRSAPFAPAARPTLKITGIK
+ TPDFAPSQTTEGDLHYGHGEAGTHAPGMSQRRMLEVEIDVLDKNNRLAERNRARFAAH
+ QQLVLNLVSSPGSGKTTLLTETLMKLKDRVPCAVIEGDQQTVNDAARIRATGTPAIQV
+ NTGKGCHLDAQMIADAAPRLPLDDRGILFIENVGNLVCPASFDLGEKHKVAVLSVTEG
+ EDKPLKYPHMFAAASLMLLNKVDLLPYLNFDVEKCIASAREVNPEIEIILISATSGEG
+ MDQWLAWLEAQRCA"
+ misc_feature complement(112475..113344)
+ /locus_tag="SARI_00117"
+ /note="hydrogenase nickel incorporation protein HypB;
+ Provisional; Region: PRK10463"
+ /db_xref="CDD:182479"
+ gene complement(113451..113822)
+ /gene="hypA"
+ /locus_tag="SARI_00118"
+ CDS complement(113451..113822)
+ /gene="hypA"
+ /locus_tag="SARI_00118"
+ /inference="protein motif:BlastProDom:IPR000688"
+ /inference="protein motif:HMMPfam:IPR000688"
+ /inference="protein motif:HMMPIR:IPR000688"
+ /inference="protein motif:HMMTigr:IPR000688"
+ /inference="protein motif:ScanRegExp:IPR000688"
+ /inference="similar to AA sequence:INSD:CAD05961.1"
+ /note="plays a role in hydrogenase nickel cofactor
+ insertion"
+ /codon_start=1
+ /transl_table=11
+ /product="hydrogenase nickel incorporation protein"
+ /protein_id="YP_001569213.1"
+ /db_xref="GI:161502101"
+ /db_xref="InterPro:IPR000688"
+ /translation="MHEITLCQRALELIEQQASAYGAKHVTAIWLKIGAFSCVETSAL
+ SFCFDLVCRGTIAEGCKLHLEEQEAECWCEHCQQYVTLLTHRVRRCPQCHSDTLRIVA
+ DDGLQIRRIEIDETPAPDGNA"
+ misc_feature complement(113481..113822)
+ /gene="hypA"
+ /locus_tag="SARI_00118"
+ /note="Hydrogenase expression/synthesis hypA family;
+ Region: HypA; cl17671"
+ /db_xref="CDD:248225"
+ misc_feature complement(113481..113822)
+ /gene="hypA"
+ /locus_tag="SARI_00118"
+ /note="hydrogenase nickel incorporation protein;
+ Validated; Region: hypA; PRK03681"
+ /db_xref="CDD:179630"
+ gene 114033..114500
+ /locus_tag="SARI_00119"
+ CDS 114033..114500
+ /locus_tag="SARI_00119"
+ /inference="similar to AA sequence:REFSEQ:YP_151880.1"
+ /note="regulates several genes involved in the formate
+ hydrogenlyase system; seems to prevent binding of FhlA
+ transcriptional activator to the activator sequence of hyc
+ operon"
+ /codon_start=1
+ /transl_table=11
+ /product="formate hydrogenlyase regulatory protein HycA"
+ /protein_id="YP_001569214.1"
+ /db_xref="GI:161502102"
+ /translation="MTIWEISEKADYIAQRHRRLQDQWHIYCNSLVQGITLSKARLHH
+ AMSCAPEKDLCFVLFEHFRIYVALADGFNSHTIEYYVETKDGEDKQLIAQAQLDIDGK
+ VDERVNNRDREQVLEHYLEKIASVYDSLYAAVETNSPINLRQLVKGHSPAVQA"
+ misc_feature 114033..114488
+ /locus_tag="SARI_00119"
+ /note="formate hydrogenlyase regulatory protein HycA;
+ Provisional; Region: PRK10198"
+ /db_xref="CDD:182298"
+ gene 114640..115248
+ /locus_tag="SARI_00120"
+ CDS 114640..115248
+ /locus_tag="SARI_00120"
+ /inference="protein motif:HMMPfam:IPR001450"
+ /inference="protein motif:ScanRegExp:IPR001450"
+ /inference="similar to AA sequence:REFSEQ:NP_457246.1"
+ /note="'KEGG: eci:UTI89_C3087 5.8e-88 hycB; formate
+ hydrogenlyase subunit 2;
+ COG: COG1142 Fe-S-cluster-containing hydrogenase
+ components 2;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="formate hydrogenlyase subunit 2"
+ /protein_id="YP_001569215.2"
+ /db_xref="GI:448236178"
+ /db_xref="InterPro:IPR001450"
+ /translation="MNRFVIADSTLCIGCRTCEAACSETHRQHGLQSMPRLKVMLNEK
+ ESAPQLCHHCEDAPCATVCPVNAINRVDGAVQLNESLCVSCKLCGIACPFGAIEFSGS
+ RPLHIPANANTPKAPSAPPAPARVSTLLDWVPGIRAIAVKCDLCSFDEQGPACVRMCP
+ TKALHLVDNTDIARASKRKRELTFNTDFGDLTLFQQAQSGDA"
+ misc_feature 114640..115188
+ /locus_tag="SARI_00120"
+ /note="Fe-S-cluster-containing hydrogenase components 2
+ [Energy production and conversion]; Region: HycB; COG1142"
+ /db_xref="CDD:224065"
+ gene 115248..117074
+ /locus_tag="SARI_00121"
+ CDS 115248..117074
+ /locus_tag="SARI_00121"
+ /inference="protein motif:HMMPfam:IPR001750"
+ /note="'catalyzes the oxidation of formate to carbon
+ dioxide and molecular hydrogen; formate hydrogenlyase
+ comprises of a formate dehydrogenase, unidentified
+ electron carriers and a hydrogenase (subunit 3)'"
+ /codon_start=1
+ /transl_table=11
+ /product="formate hydrogenlyase subunit 3"
+ /protein_id="YP_001569216.1"
+ /db_xref="GI:161502104"
+ /db_xref="InterPro:IPR001750"
+ /translation="MSSLSLITSGVVWFVAAAVLAFLFSFHKALSGWVAGIGGAVGSL
+ CTAGAGFTALTSAVTVSGVMPFTGQMLQITPLNAIWLITLGLCGLFVSLFNIDWHRHP
+ QVKANGLLVNLLIAAAVCAVVASNLGTMVVMAEIMALCAVFLTGGSKEGKLWFALGRL
+ GTLLLAIACGLAWQRYGTLDMGLLDQRAQQLPLGSDIWLLGVIGFGLLAGIIPLHGWV
+ PQAHANASAPAAALFSTVVMKIGLLGILSLSLIGGNAPLWWGVALLVLGIITAFVGGL
+ YALMEHNIQRLLAYHTLENIGIILLGLGAGVTGIALNQPALIALGLTGGLYHLVNHSL
+ FKSVLFLGAGSIWFCTGHRDIEKLGGIGKRMPVISIAMLVGLMAMAALPPLNGFAGEW
+ VIYQSFFRLGNSGAFVGRLLGPLLAVGLAVTGALAVMCMAKVYGVTFLGAPRTKEAEN
+ ASCAPILMGVSVVALAICCVLGGVAAPWLLPMISTAVPLPLETAHTTVSQPMITLLLI
+ ACPLLPFIIMAMFKGNRLPSRSRGAAWVCGYDHERSMVITAHGFAMPVKEAFAPVLKL
+ RQWLNPVSLVPGWQSAAAAVLFRRLALIELAVLVVIVVSRGA"
+ misc_feature 115326..116990
+ /locus_tag="SARI_00121"
+ /note="formate hydrogenlyase subunit 3; Reviewed; Region:
+ PRK08042"
+ /db_xref="CDD:181206"
+ misc_feature 115632..116438
+ /locus_tag="SARI_00121"
+ /note="NADH-Ubiquinone/plastoquinone (complex I), various
+ chains; Region: Oxidored_q1; pfam00361"
+ /db_xref="CDD:201180"
+ gene 117077..118000
+ /locus_tag="SARI_00122"
+ CDS 117077..118000
+ /locus_tag="SARI_00122"
+ /inference="protein motif:HMMPanther:IPR001694"
+ /inference="protein motif:HMMPfam:IPR001694"
+ /inference="protein motif:ScanRegExp:IPR001694"
+ /inference="similar to AA sequence:REFSEQ:NP_457244.1"
+ /note="'KEGG: eci:UTI89_C3085 1.3e-145 hycD;
+ membrane-spanning protein of formate hydrogenase;
+ COG: COG0650 Formate hydrogenlyase subunit 4;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569217.1"
+ /db_xref="GI:161502105"
+ /db_xref="InterPro:IPR001694"
+ /translation="MSVFYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYR
+ DIIKLLGRQSIAPADSGWVFRLTPFVMVGVMLTIATALPVVTVGSPLPQLGDLITLIY
+ LFAIARFFFSIAGLDTGSPFTAIGASREAMLGVLVEPILLLGLWVAAQVAGSTHISNI
+ TDTIYHWPVARSIPLILALCACAFATFIEMGKLPFDLAEAEQELQEGPLTEYSGSGFA
+ VLKWGISLKQLVVLQMFVGVFLPWGQMETFTAGGLLLALVIAVVKLVVGVLVIALFEN
+ SMARLRFCATSRVTWAGFGFAFLAFVSLLAA"
+ misc_feature 117077..117949
+ /locus_tag="SARI_00122"
+ /note="Formate hydrogenlyase subunit 4 [Energy production
+ and conversion]; Region: HyfC; COG0650"
+ /db_xref="CDD:223723"
+ misc_feature 117083..>117730
+ /locus_tag="SARI_00122"
+ /note="NADH dehydrogenase; Region: NADHdh; cl00469"
+ /db_xref="CDD:241885"
+ gene 118018..119727
+ /locus_tag="SARI_00123"
+ CDS 118018..119727
+ /locus_tag="SARI_00123"
+ /inference="protein motif:BlastProDom:IPR001268"
+ /inference="protein motif:HMMPfam:IPR001135"
+ /inference="protein motif:HMMPfam:IPR001268"
+ /inference="protein motif:HMMPfam:IPR001501"
+ /inference="protein motif:ScanRegExp:IPR001135"
+ /inference="protein motif:superfamily:IPR008992"
+ /note="'KEGG: eci:UTI89_C3084 0. hycE; formate
+ hydrogenlyase subunit 5 precursor;
+ COG: COG3261 Ni,Fe-hydrogenase III large subunit;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569218.1"
+ /db_xref="GI:161502106"
+ /db_xref="InterPro:IPR001135"
+ /db_xref="InterPro:IPR001268"
+ /db_xref="InterPro:IPR001501"
+ /db_xref="InterPro:IPR008992"
+ /translation="MSEEKLGQQYLAALHQAFPGVVLDEAWQTKDQLTITVKVNYLPE
+ VVEFLYYQQGGWLSVLFGNDERQLCGHYAVYYVMSMEQGTRCWVTVRVEVDPNKPEYP
+ SVTPRVSAAVWGEREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKDSMDYRQRPA
+ PTTDAETYEFINELGDKKNNVVPIGPLHVTSDEPGHFRLFVDGENIIDADYRLFYVHR
+ GMEKLAETRMGYNEVTFLSDRVCGICGFAHSTAYTTSVENAMGIQVPERAQMIRAILL
+ EVERLHSHLLNLGLACHFTGFDSGFMQFFRVRETSMKMAEILTGARKTYGLNLIGGIR
+ RDLLKEDMIQTRQLAQQMRRDVQELVDMLLSTPNMEQRTVGIGRLDPEIARDFSNVGP
+ MVRASGHARDTRADHPFVGYGLLPMEVHSEQGCDVISRLKVRINEVYTSLNMIDFGLD
+ NLPGGPLMVEGFTYIPHRFALGFAEAPRGDDIHWSMTGDNQKLYRWRCRAATYANWPT
+ LRYMLRGNTVSDAPLIIGSLDPCYSCTDRMTVVDVRKKKSKVVPYKELERYSIERKNS
+ PLK"
+ misc_feature 118021..118515
+ /locus_tag="SARI_00123"
+ /note="Ni,Fe-hydrogenase III component G [Energy
+ production and conversion]; Region: HycE; COG3262"
+ /db_xref="CDD:225801"
+ misc_feature 118531..119634
+ /locus_tag="SARI_00123"
+ /note="Ni,Fe-hydrogenase III large subunit [Energy
+ production and conversion]; Region: HycE; COG3261"
+ /db_xref="CDD:225800"
+ misc_feature 118540..119628
+ /locus_tag="SARI_00123"
+ /note="NADH dehydrogenase subunit D; Validated; Region:
+ PRK06075; cl17338"
+ /db_xref="CDD:247892"
+ gene 119737..120279
+ /locus_tag="SARI_00124"
+ CDS 119737..120279
+ /locus_tag="SARI_00124"
+ /inference="protein motif:HMMPfam:IPR001450"
+ /inference="protein motif:ScanRegExp:IPR001450"
+ /inference="protein motif:superfamily:IPR009051"
+ /inference="similar to AA sequence:REFSEQ:NP_457242.1"
+ /note="'electron transfer protein for hydrogenase-3; the
+ formate hydrogenlyase complex comprises of a formate
+ dehydrogenase, unidentified electron carriers and
+ hydrogenase-3; in this non-energy conserving pathway,
+ molecular hydrogen and carbodioxide are released from
+ formate'"
+ /codon_start=1
+ /transl_table=11
+ /product="formate hydrogenlyase complex iron-sulfur
+ subunit"
+ /protein_id="YP_001569219.1"
+ /db_xref="GI:161502107"
+ /db_xref="InterPro:IPR001450"
+ /db_xref="InterPro:IPR009051"
+ /translation="MFTFIKKVIKTGTATSSYPLEPIAVDKNFRGKPEHNPQQCIGCA
+ ACVNACPSNALTVETDLATNELAWQFNLGRCIFCGRCEEVCPTAAIKLSQEYELAVWK
+ KEDFLQQSRFALCNCRVCNRPFAVQKEIDYAIALLKHNGDSRAEHHRESFETCPDCKR
+ QKCLVPSDRIELTRHMKEAS"
+ misc_feature 119737..120276
+ /locus_tag="SARI_00124"
+ /note="formate hydrogenlyase complex iron-sulfur subunit;
+ Provisional; Region: PRK12387"
+ /db_xref="CDD:183492"
+ misc_feature <119851..>119997
+ /locus_tag="SARI_00124"
+ /note="The HCP family of iron-sulfur proteins includes
+ hybrid cluster protein (HCP), acetyl-CoA synthase (ACS),
+ and carbon monoxide dehydrogenase (CODH), all of which
+ contain [Fe4-S4] metal clusters at their active sites.
+ These proteins have a conserved...; Region: HCP_like;
+ cl14655"
+ /db_xref="CDD:246686"
+ gene 120279..121046
+ /locus_tag="SARI_00125"
+ CDS 120279..121046
+ /locus_tag="SARI_00125"
+ /inference="protein motif:HMMPfam:IPR006137"
+ /inference="protein motif:ScanRegExp:IPR006138"
+ /inference="similar to AA sequence:REFSEQ:NP_461768.1"
+ /note="'KEGG: eci:UTI89_C3082 1.4e-132 hycG; formate
+ hydrogenlyase subunit 7;
+ COG: COG3260 Ni,Fe-hydrogenase III small subunit;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569220.1"
+ /db_xref="GI:161502108"
+ /db_xref="InterPro:IPR006137"
+ /db_xref="InterPro:IPR006138"
+ /translation="MSNLLGPRDANGIPVPMTVDESIASMKASLLKNIKRSAYVYRVD
+ CGGCNGCEIEIFATLSPLFDAERFGIKVVPSPRHADILLFTGAVTRAMRSPALRAWQS
+ APDPKICISYGACGNSGGIFHDLYCVWGGTDKIVPVDVYIPGCPPTPAATLYGFAMAL
+ GLLEQKIHARAPGELDDQPAEILHPDMVQPLRVKVDRAARRLAGYRYGRQIADDYLTQ
+ LGQGEQQVARWLEAENDPRLTEIVTHLNHVVEEARIR"
+ misc_feature 120366..120809
+ /locus_tag="SARI_00125"
+ /note="Ni,Fe-hydrogenase III small subunit [Energy
+ production and conversion]; Region: COG3260"
+ /db_xref="CDD:225799"
+ gene 121043..121453
+ /locus_tag="SARI_00126"
+ CDS 121043..121453
+ /locus_tag="SARI_00126"
+ /inference="protein motif:HMMPfam:IPR010005"
+ /inference="similar to AA sequence:REFSEQ:NP_457240.1"
+ /note="'KEGG: eci:UTI89_C3081 2.2e-63 hycH; formate
+ hydrogenlyase maturation protein HycH;
+ COG: NOG09848 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569221.1"
+ /db_xref="GI:161502109"
+ /db_xref="InterPro:IPR010005"
+ /translation="MSEQVVFSQLSRKFIDENDATPAEAQQVVYYSLAIGHHLGVIDC
+ LEAALTCPWDEYLAWIATLEAGSDARRKMEGVPKYGEIVIDFNHVSMLARAFDNARAA
+ QTPQQQEWSKLMLSMLHDIHQESAIYLMVRRLRD"
+ misc_feature 121043..121444
+ /locus_tag="SARI_00126"
+ /note="formate hydrogenlyase maturation protein HycH;
+ Provisional; Region: PRK15084"
+ /db_xref="CDD:185042"
+ gene 121479..121916
+ /gene="hycI"
+ /locus_tag="SARI_00127"
+ CDS 121479..121916
+ /gene="hycI"
+ /locus_tag="SARI_00127"
+ /inference="protein motif:Gene3D:IPR000671"
+ /inference="protein motif:HMMPfam:IPR000671"
+ /inference="protein motif:HMMPIR:IPR000671"
+ /inference="protein motif:HMMTigr:IPR000671"
+ /inference="protein motif:HMMTigr:IPR004420"
+ /inference="protein motif:HMMTigr:IPR006227"
+ /inference="similar to AA sequence:REFSEQ:YP_217765.1"
+ /note="involved in the C-terminal processing of the large
+ subunit of hydrogenase 3 HycE"
+ /codon_start=1
+ /transl_table=11
+ /product="hydrogenase 3 maturation protease"
+ /protein_id="YP_001569222.1"
+ /db_xref="GI:161502110"
+ /db_xref="InterPro:IPR000671"
+ /db_xref="InterPro:IPR004420"
+ /db_xref="InterPro:IPR006227"
+ /translation="MMGDDGAGPLLAEKCVAQPKGNWVVIDGGSAPENDIVAIRELRP
+ DRLLIVDATDMGLNPGEIRIIDPDDIAEMFMMTTHNMPLNYLVDQLKEDVGEVIFLGI
+ QPDIVGFYYPMTQPIKDAVDTVYQRLEGWLGHGGFAALEAPEA"
+ misc_feature 121479..121877
+ /gene="hycI"
+ /locus_tag="SARI_00127"
+ /note="coenzyme F420-reducing hydrogenase delta subunit
+ (putative coenzyme F420 hydrogenase processing subunit);
+ Region: frhD; TIGR00130"
+ /db_xref="CDD:161726"
+ misc_feature 121479..121862
+ /gene="hycI"
+ /locus_tag="SARI_00127"
+ /note="Endopeptidases belonging to membrane-bound hydrogen
+ evolving hydrogenase group. In hydrogenase 3 from E coli,
+ the maturation of the large subunit (HycE) requires the
+ cleavage of a C-terminal peptide by the endopeptidase
+ HycI, before the final formation...; Region:
+ H2MP_MemB-H2evol; cd06067"
+ /db_xref="CDD:99877"
+ misc_feature order(121491..121493,121629..121631,121713..121715)
+ /gene="hycI"
+ /locus_tag="SARI_00127"
+ /note="nickel binding site [ion binding]; other site"
+ /db_xref="CDD:99877"
+ gene 122108..122653
+ /locus_tag="SARI_00128"
+ CDS 122108..122653
+ /locus_tag="SARI_00128"
+ /inference="protein motif:HMMPfam:IPR001450"
+ /inference="protein motif:ScanRegExp:IPR001450"
+ /inference="similar to AA sequence:REFSEQ:NP_457237.1"
+ /note="involved in electron transport from formate to
+ hydrogen"
+ /codon_start=1
+ /transl_table=11
+ /product="electron transport protein HydN"
+ /protein_id="YP_001569223.1"
+ /db_xref="GI:161502111"
+ /db_xref="InterPro:IPR001450"
+ /translation="MNRFIIADASKCIGCRTCEVACVVSHQENQDCASLTPETFLPRI
+ HVIKGVNVSTATLCRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYG
+ AMEVVVRPVVRNSGAGLNVRAEKAEANKCDLCHHREAGPACMAACPTHALICVDRNKL
+ EQLSAEKRRRAALDSTASLLF"
+ misc_feature 122108..122650
+ /locus_tag="SARI_00128"
+ /note="formate dehydrogenase-H ferredoxin subunit;
+ Provisional; Region: PRK10330"
+ /db_xref="CDD:182382"
+ misc_feature <122225..122437
+ /locus_tag="SARI_00128"
+ /note="RPB11 and RPB3 subunits of RNA polymerase; Region:
+ RNAP_RPB11_RPB3; cl11409"
+ /db_xref="CDD:245605"
+ gene 122788..125028
+ /locus_tag="SARI_00129"
+ CDS 122788..125028
+ /locus_tag="SARI_00129"
+ /inference="protein motif:BlastProDom:IPR001792"
+ /inference="protein motif:BlastProDom:IPR006071"
+ /inference="protein motif:HMMPfam:IPR001792"
+ /inference="protein motif:HMMPfam:IPR006070"
+ /inference="protein motif:HMMPfam:IPR011125"
+ /inference="protein motif:HMMPIR:IPR004421"
+ /inference="protein motif:HMMTigr:IPR004421"
+ /inference="protein motif:ScanRegExp:IPR001792"
+ /inference="protein motif:superfamily:IPR011056"
+ /note="'KEGG: msu:MS0845 3.5e-06 acyP; acylphosphatases
+ K01512;
+ COG: COG0068 Hydrogenase maturation factor;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hydrogenase maturation protein"
+ /protein_id="YP_001569224.1"
+ /db_xref="GI:161502112"
+ /db_xref="InterPro:IPR001792"
+ /db_xref="InterPro:IPR004421"
+ /db_xref="InterPro:IPR006070"
+ /db_xref="InterPro:IPR006071"
+ /db_xref="InterPro:IPR011056"
+ /db_xref="InterPro:IPR011125"
+ /translation="MAIDTPSGVQLRIRGKVQGVGFRPFVWQLAQQLRLHGDVCNDGD
+ GVVVRLLEEPSQFIAALYQHCPPLARIDSVEHESLIWERTPTDFAIRQSAGGAMNTQI
+ VPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCP
+ ECDTEYRDPYDRRFHAQPVACPACGPHLEWLSQCERAEKEAALQAAVAQLNAGGIIAV
+ KGLGGFHLVCDARNNSAVAMLRARKHRPAKPLAVMLPTAQTLPTAARSLLTTPAAPIV
+ LVDKQSVPSLCEGIAPGLTEVGVMLPANPLQHLLLQALNYPLVMTSGNLSGRPPAITN
+ EQALDDLHDIADGFLLHNRDIVQRMDDSVVRDSGEMLRRSRGYVPDAIALPPGFRDVP
+ PILCLGADLKNTFCLVRGEQAVVSQHLGDLSDDGIQAQWREALRLIQSIYDFTPERIV
+ CDAHPGYVSSRWASEMRLPTGAVLHHHAHAAACLAEHGWPLDGGEVIALTVDGIGMGE
+ NGALWGGECLRVNYRQCERLGGLPAVALPGGDLAARQPWRNLLAQCLRFVPDWQNYPE
+ TAGVQQQSWNVLARAIERGVNAPLASSCGRLFDAVAAALRCAPALLSYEGEAACALEA
+ LASQCVHVKHPVTMPLNGAQLDLAVFWRQWLSWQATPAQRAWAFHDALACGFATLMRQ
+ QATARGITTLVFSGGVIHNRLLRARLSFYLSDFNLLFPQQFPAGDGGLSLGQGVVAAA
+ RWLSEA"
+ misc_feature 122803..123060
+ /locus_tag="SARI_00129"
+ /note="Acylphosphatase; Region: Acylphosphatase;
+ pfam00708"
+ /db_xref="CDD:216072"
+ misc_feature 122812..125010
+ /locus_tag="SARI_00129"
+ /note="Hydrogenase maturation factor [Posttranslational
+ modification, protein turnover, chaperones]; Region: HypF;
+ COG0068"
+ /db_xref="CDD:223146"
+ misc_feature 123109..123213
+ /locus_tag="SARI_00129"
+ /note="HypF finger; Region: zf-HYPF; pfam07503"
+ /db_xref="CDD:203656"
+ misc_feature 123259..123360
+ /locus_tag="SARI_00129"
+ /note="HypF finger; Region: zf-HYPF; pfam07503"
+ /db_xref="CDD:203656"
+ misc_feature 123424..123909
+ /locus_tag="SARI_00129"
+ /note="Telomere recombination; Region: Sua5_yciO_yrdC;
+ pfam01300"
+ /db_xref="CDD:216422"
+ gene complement(125125..126258)
+ /locus_tag="SARI_00130"
+ CDS complement(125125..126258)
+ /locus_tag="SARI_00130"
+ /inference="protein motif:BlastProDom:IPR001327"
+ /inference="protein motif:FPrintScan:IPR001100"
+ /inference="protein motif:FPrintScan:IPR013027"
+ /inference="protein motif:HMMPfam:IPR001327"
+ /inference="protein motif:HMMPfam:IPR013027"
+ /inference="similar to AA sequence:INSD:AAL21721.1"
+ /note="catalyzes the reduction of the rubredoxin moiety of
+ nitric oxide reductase"
+ /codon_start=1
+ /transl_table=11
+ /product="nitric oxide reductase"
+ /protein_id="YP_001569225.1"
+ /db_xref="GI:161502113"
+ /db_xref="InterPro:IPR001100"
+ /db_xref="InterPro:IPR001327"
+ /db_xref="InterPro:IPR013027"
+ /translation="MSRGIIIIGSGFAARQLVKNIRKQDAHVPLTLIAADSMDEYNKP
+ DLSHVISQSQRADDLTRQLAGEFAEQFNLRLFPHTWVADIDADAHVVKSQDKQWQYDK
+ LVLATGAAAFVPPVAGRELMLTLNSQQEYRACETQLRAAQRVLIVGGGLIGSELAMDF
+ CRAGKTVTLMDNAASLLASLMPPEVSSRLQHRLTDMGVHLQLKSQLQELEKSEAGIRA
+ TLASQRRIEVDAAIAATGLRPETALARRAGLVINHGVCVDSYLQTSHPDIYAIGDCAE
+ INGQVLPFLQPIQLSAMYLAKNLLGGKAPLKLPAMLVKVKTPELPLYLAGETQRRDLS
+ WHITAESDGMIAKGMSGEGQLRAFVASEDRMKEAFALLKMLPV"
+ misc_feature complement(125128..126258)
+ /locus_tag="SARI_00130"
+ /note="NADH:flavorubredoxin oxidoreductase; Provisional;
+ Region: PRK04965"
+ /db_xref="CDD:179902"
+ misc_feature complement(125728..>126156)
+ /locus_tag="SARI_00130"
+ /note="NAD(P)-binding Rossmann-like domain; Region:
+ NAD_binding_8; cl17500"
+ /db_xref="CDD:248054"
+ misc_feature complement(<125665..125832)
+ /locus_tag="SARI_00130"
+ /note="Pyridine nucleotide-disulphide oxidoreductase;
+ Region: Pyr_redox; pfam00070"
+ /db_xref="CDD:215691"
+ gene complement(126255..127694)
+ /locus_tag="SARI_00131"
+ CDS complement(126255..127694)
+ /locus_tag="SARI_00131"
+ /inference="protein motif:BlastProDom:IPR004039"
+ /inference="protein motif:HMMPfam:IPR001279"
+ /inference="protein motif:HMMPfam:IPR004039"
+ /inference="protein motif:HMMPfam:IPR008254"
+ /inference="similar to AA sequence:INSD:AAV78555.1"
+ /note="detoxifies nitric oxide using NADH"
+ /codon_start=1
+ /transl_table=11
+ /product="anaerobic nitric oxide reductase
+ flavorubredoxin"
+ /protein_id="YP_001569226.1"
+ /db_xref="GI:161502114"
+ /db_xref="InterPro:IPR001279"
+ /db_xref="InterPro:IPR004039"
+ /db_xref="InterPro:IPR008254"
+ /translation="MSILVKNNIHWVGQRDWEVRDFHGTEYKTLRGSSYNSYLIREEK
+ NVLIDTVDHKFSREFVQNLRSEIDLADIDYIIINHAEEDHAGALTELMAQIPDAPIYC
+ TANAIDSINGHHHHPEWNFKVVKTGDTLDIGNGKQLIFVETPMLHWPDSMMTYMTGDA
+ VLFSNDAFGQHYCDERLFNDEVDQTELFEQCQRYYANILTPFSRLVTPKITEILGFNL
+ PVDMIATSHGVVWRDNPTQIVELYLKWAADYQEDRITIFYDTMSNNTRIMADAIAQGI
+ NEVDPNVAVKIFNVARSDKNEILTNVFRSKGVLVGTSTMNNVMMPKIAGLVEEMTGLR
+ FRNKRASAFGSHGWSGGAVDRLSTRLQDAGFEMSLSLKAKWRPDLDALELCRQHGRDI
+ ARQWALAPLPETTQKTTPAEEITTCAAADLGPKMQCSVCQWIYDPALGEPLQDVAPGT
+ PWSDVPDNFLCPECSLGKDVFDVLATEAK"
+ misc_feature complement(126258..127694)
+ /locus_tag="SARI_00131"
+ /note="anaerobic nitric oxide reductase flavorubredoxin;
+ Provisional; Region: PRK05452"
+ /db_xref="CDD:235475"
+ misc_feature complement(127161..127589)
+ /locus_tag="SARI_00131"
+ /note="Metallo-beta-lactamase superfamily; Region:
+ Lactamase_B; smart00849"
+ /db_xref="CDD:214854"
+ misc_feature complement(126516..126935)
+ /locus_tag="SARI_00131"
+ /note="Flavodoxin-like fold; Region: Flavodoxin_2;
+ cl00438"
+ /db_xref="CDD:241863"
+ misc_feature complement(126273..126422)
+ /locus_tag="SARI_00131"
+ /note="Rubredoxin; nonheme iron binding domains containing
+ a [Fe(SCys)4] center. Rubredoxins are small nonheme iron
+ proteins. The iron atom is coordinated by four cysteine
+ residues (Fe(S-Cys)4), but iron can also be replaced by
+ cobalt, nickel or zinc. They are...; Region: rubredoxin;
+ cd00730"
+ /db_xref="CDD:238372"
+ misc_feature complement(order(126303..126305,126312..126314,
+ 126402..126404,126411..126413))
+ /locus_tag="SARI_00131"
+ /note="iron binding site [ion binding]; other site"
+ /db_xref="CDD:238372"
+ gene 127850..129400
+ /locus_tag="SARI_00132"
+ CDS 127850..129400
+ /locus_tag="SARI_00132"
+ /inference="protein motif:HMMPfam:IPR002078"
+ /inference="protein motif:HMMPfam:IPR003018"
+ /inference="protein motif:HMMSmart:IPR003018"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR002078"
+ /inference="protein motif:superfamily:IPR008931"
+ /inference="similar to AA sequence:REFSEQ:NP_461760.1"
+ /note="Required for the expression of anaerobic nitric
+ oxide (NO) reductase; acts as a transcriptional activator
+ for the norVW operon"
+ /codon_start=1
+ /transl_table=11
+ /product="anaerobic nitric oxide reductase transcription
+ regulator"
+ /protein_id="YP_001569227.1"
+ /db_xref="GI:161502115"
+ /db_xref="InterPro:IPR002078"
+ /db_xref="InterPro:IPR003018"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR008931"
+ /translation="MHCQNDNEVAMSFSVEVLAGIAIELQRGIGHQDRFQRLITTLRQ
+ VLACDASALLRYESGQFIPLAIDGLAQDVLGRRFTLEGHPRLEAIARAGDVVRFPADS
+ DLPDPYDGLIPGQESLKVHACVGLPLFAGQNLIGALTFDAMTPAQFEVFSDEELRLIA
+ ALAAGALSNALLIEQLESQNMLPRSSAAFEPIKETHMIGLSPAMTQLKKEIEIVASSD
+ LNVLIGGETGTGKELVAKAIHQGSPRAVNPLVYLNCAALPESVAESELFGHVKGAFTG
+ AISNRSGKFEMADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRSLRVDVRVL
+ AATNRDLREEVLAGRFRADLFHRLSVFPLFVPPLRERGNDVVLLAGYFCEQCRLRLGL
+ SRVVLSPGARRHLLNYGWPGNVRELEHAIHRAVVLARATRAGDEVILEAQHFALSEDV
+ LPAPPAESFLALPNCRNLRESTENFQRELIRQALAQNHHNWAASARALETDVANLHRL
+ AKRLGLKD"
+ misc_feature 127886..129397
+ /locus_tag="SARI_00132"
+ /note="anaerobic nitric oxide reductase transcription
+ regulator; Provisional; Region: PRK05022"
+ /db_xref="CDD:235331"
+ misc_feature 127943..128293
+ /locus_tag="SARI_00132"
+ /note="GAF domain; Region: GAF; pfam01590"
+ /db_xref="CDD:216590"
+ misc_feature 128453..128926
+ /locus_tag="SARI_00132"
+ /note="The AAA+ (ATPases Associated with a wide variety of
+ cellular Activities) superfamily represents an ancient
+ group of ATPases belonging to the ASCE (for additional
+ strand, catalytic E) division of the P-loop NTPase fold.
+ The ASCE division also includes ABC; Region: AAA; cd00009"
+ /db_xref="CDD:99707"
+ misc_feature 128522..128545
+ /locus_tag="SARI_00132"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature order(128525..128548,128735..128737,128861..128863)
+ /locus_tag="SARI_00132"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:99707"
+ misc_feature 128723..128740
+ /locus_tag="SARI_00132"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature 128918..128920
+ /locus_tag="SARI_00132"
+ /note="arginine finger; other site"
+ /db_xref="CDD:99707"
+ gene complement(129397..130362)
+ /gene="gutQ"
+ /locus_tag="SARI_00133"
+ CDS complement(129397..130362)
+ /gene="gutQ"
+ /locus_tag="SARI_00133"
+ /inference="protein motif:HMMPfam:IPR000644"
+ /inference="protein motif:HMMPfam:IPR001347"
+ /inference="protein motif:HMMTigr:IPR004800"
+ /inference="similar to AA sequence:INSD:AAO70301.1"
+ /note="catalyzes the conversion of D-arabinose 5-phosphate
+ to D-ribulose-5-phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="D-arabinose 5-phosphate isomerase"
+ /protein_id="YP_001569228.1"
+ /db_xref="GI:161502116"
+ /db_xref="InterPro:IPR000644"
+ /db_xref="InterPro:IPR001347"
+ /db_xref="InterPro:IPR004800"
+ /translation="MSDALLHAGRQTLMLELQEASRLPERLGDDFVRAANIIIHCEGK
+ VIVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGA
+ KELDLIIPRLEDKSVALLAMTGKPHSPLGRAAKAVLDISVEREACPMHLAPTSSTVNT
+ LMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNNVHHLMRQGDAIPQVMLATSV
+ MDAMLELSRTGLGLVAVCDEQHVVKGVFTDGDLRRWLVSGGALTTPVSEAMTPNGITL
+ QAQSRAIDAKELLMKRKITAAPVVDENGKLTGAINLQDFYQAGII"
+ misc_feature complement(129400..130362)
+ /gene="gutQ"
+ /locus_tag="SARI_00133"
+ /note="D-arabinose 5-phosphate isomerase; Provisional;
+ Region: gutQ; PRK11543"
+ /db_xref="CDD:183186"
+ misc_feature complement(129853..130182)
+ /gene="gutQ"
+ /locus_tag="SARI_00133"
+ /note="KpsF-like protein. KpsF is an arabinose-5-phosphate
+ isomerase which contains SIS (Sugar ISomerase) domains.
+ SIS domains are found in many phosphosugar isomerases and
+ phosphosugar binding proteins. KpsF catalyzes the
+ reversible reaction of ribulose...; Region: SIS_Kpsf;
+ cd05014"
+ /db_xref="CDD:240145"
+ misc_feature complement(130072..130074)
+ /gene="gutQ"
+ /locus_tag="SARI_00133"
+ /note="putative active site [active]"
+ /db_xref="CDD:240145"
+ misc_feature complement(129409..129747)
+ /gene="gutQ"
+ /locus_tag="SARI_00133"
+ /note="This cd contains two tandem repeats of the
+ cystathionine beta-synthase (CBS pair) domains associated
+ with KpsF/GutQ domains in the API [A5P (D-arabinose
+ 5-phosphate) isomerase] protein. These APIs catalyze the
+ conversion of the pentose pathway...; Region:
+ CBS_pair_KpsF_GutQ_assoc; cd04604"
+ /db_xref="CDD:239977"
+ gene complement(130355..131128)
+ /gene="srlR"
+ /locus_tag="SARI_00134"
+ CDS complement(130355..131128)
+ /gene="srlR"
+ /locus_tag="SARI_00134"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR001034"
+ /inference="protein motif:HMMSmart:IPR001034"
+ /inference="protein motif:ScanRegExp:IPR001034"
+ /inference="similar to AA sequence:REFSEQ:NP_806440.1"
+ /note="regulates genes involved in glucitol utilization"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional repressor SrlR"
+ /protein_id="YP_001569229.1"
+ /db_xref="GI:161502117"
+ /db_xref="InterPro:IPR001034"
+ /db_xref="InterPro:IPR011991"
+ /translation="MKPRQRQAAILEHLQKQGKCSVEELAQYFDTTGTTIRKDLVILE
+ NAGTVIRTYGGVVLNKEESDPPIDHKTLINTHKKALIAATAVKYIHDGDSIILDAGST
+ VLQMVPLLSRFSNITVMTNSLHIVNSLSELDNEQTILMPGGTFRKKSASFHGQLAENA
+ FEQFSFDKLFMGTDGIDLNAGVTTFNEVYTVSKAMCNAAREVILMADSSKFGRKSPNV
+ VCSLESVDKLITDAGIDPAFRQALEEKGITVIITGESNE"
+ misc_feature complement(130361..131128)
+ /gene="srlR"
+ /locus_tag="SARI_00134"
+ /note="DNA-bindng transcriptional repressor SrlR;
+ Provisional; Region: srlR; PRK10434"
+ /db_xref="CDD:182457"
+ misc_feature complement(130943..131113)
+ /gene="srlR"
+ /locus_tag="SARI_00134"
+ /note="DeoR-like helix-turn-helix domain; Region:
+ HTH_DeoR; pfam08220"
+ /db_xref="CDD:116806"
+ misc_feature complement(130430..130912)
+ /gene="srlR"
+ /locus_tag="SARI_00134"
+ /note="DeoR C terminal sensor domain; Region: DeoRC;
+ pfam00455"
+ /db_xref="CDD:201239"
+ gene 131149..131586
+ /locus_tag="SARI_00135"
+ CDS 131149..131586
+ /locus_tag="SARI_00135"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569230.1"
+ /db_xref="GI:161502118"
+ /translation="MYALRNDNFASYSHSQRNYPCFSLSANDSAFCASESWGKITSGC
+ NSCKCFPCIAAILTGLANTVRPFINKVSVTRCCSSSATATTTRGLKRPPERPTPTRPC
+ WLSLSNARLKREICQPPSASCAHQAITATVIRVETIMCSCCFA"
+ gene complement(131202..131561)
+ /locus_tag="SARI_00136"
+ CDS complement(131202..131561)
+ /locus_tag="SARI_00136"
+ /inference="protein motif:HMMPfam:IPR009693"
+ /inference="similar to AA sequence:INSD:AAX66675.1"
+ /note="regulator for glucitol utilization"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional activator GutM"
+ /protein_id="YP_001569231.1"
+ /db_xref="GI:161502119"
+ /db_xref="InterPro:IPR009693"
+ /translation="MVSTLITVAVIAWCAQLALGGWQISRFNRAFDKLSQQGRVGVGR
+ SGGRFKPRVVVAVALDEQQRVTDTLLMKGLTVFARPVKIAAMQGKHLHELQPDVIFPH
+ DSLAQNALSLALKLKHG"
+ misc_feature complement(131208..131561)
+ /locus_tag="SARI_00136"
+ /note="DNA-binding transcriptional activator GutM;
+ Provisional; Region: PRK10234"
+ /db_xref="CDD:182322"
+ gene complement(131638..132417)
+ /locus_tag="SARI_00137"
+ CDS complement(131638..132417)
+ /locus_tag="SARI_00137"
+ /inference="protein motif:HMMPanther:IPR002347"
+ /inference="protein motif:HMMPfam:IPR002198"
+ /inference="protein motif:ScanRegExp:IPR002198"
+ /inference="similar to AA sequence:REFSEQ:NP_461756.1"
+ /note="catalyzes the conversion of sorbitol 6-phosphate
+ into fructose 6-phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="sorbitol-6-phosphate dehydrogenase"
+ /protein_id="YP_001569232.1"
+ /db_xref="GI:161502120"
+ /db_xref="InterPro:IPR002198"
+ /db_xref="InterPro:IPR002347"
+ /translation="MNQVAVVIGGGQTLGAFLCRGLAEEGYRVAVVDIQSDKAANVAR
+ EINADFGEGMAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYSAGIAKAAFISDFQL
+ GDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFG
+ GVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDEVEQYYIDK
+ VPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQVMF"
+ misc_feature complement(131641..132417)
+ /locus_tag="SARI_00137"
+ /note="sorbitol-6-phosphate dehydrogenase; Provisional;
+ Region: PRK12384"
+ /db_xref="CDD:183489"
+ misc_feature complement(131644..132417)
+ /locus_tag="SARI_00137"
+ /note="Sorbitol 6-phosphate dehydrogenase (SDH), classical
+ (c) SDRs; Region: SDH_SDR_c_like; cd05322"
+ /db_xref="CDD:187583"
+ misc_feature complement(order(131848..131853,131857..131868,
+ 131944..131946,131956..131958,131995..132003,
+ 132085..132087,132148..132156,132232..132240,
+ 132313..132321,132376..132387,132391..132393))
+ /locus_tag="SARI_00137"
+ /note="putative NAD(P) binding site [chemical binding];
+ other site"
+ /db_xref="CDD:187583"
+ misc_feature complement(order(131944..131946,131956..131958,
+ 131995..131997,132082..132084))
+ /locus_tag="SARI_00137"
+ /note="active site"
+ /db_xref="CDD:187583"
+ gene complement(132428..132790)
+ /locus_tag="SARI_00138"
+ CDS complement(132428..132790)
+ /locus_tag="SARI_00138"
+ /inference="protein motif:BlastProDom:IPR004716"
+ /inference="protein motif:HMMPfam:IPR004716"
+ /inference="protein motif:HMMPIR:IPR004716"
+ /inference="similar to AA sequence:INSD:AAV78549.1"
+ /note="phosphoenolpyruvate-dependent sugar
+ phosphotransferase system; catalyzes the phosphorylation
+ of incoming sugar substrates concomitant with their
+ translocation across the cell membrane; IIB is
+ phosphorylated by IIA and then transfers the phosphoryl
+ group to the sugar; IIC forms the translocation channel"
+ /codon_start=1
+ /transl_table=11
+ /product="PTS system glucitol/sorbitol-specific
+ transporter subunit IIA"
+ /protein_id="YP_001569233.1"
+ /db_xref="GI:161502121"
+ /db_xref="InterPro:IPR004716"
+ /translation="MSVIYQTTITRIGQSAAEALGEQMLITFREGAPADIEEFCFIHC
+ HGELTGELQPGARFELGQHCYPVTAVGSVAGQNLRELGHITLRFDGLREAEFPGTVHV
+ AGLVPDDIAPGCILKFIA"
+ misc_feature complement(132431..132790)
+ /locus_tag="SARI_00138"
+ /note="PTS system glucitol/sorbitol-specific transporter
+ subunit IIA; Provisional; Region: PRK10377"
+ /db_xref="CDD:182419"
+ gene complement(132802..133773)
+ /locus_tag="SARI_00139"
+ CDS complement(132802..133773)
+ /locus_tag="SARI_00139"
+ /inference="protein motif:HMMPfam:IPR011618"
+ /inference="protein motif:HMMPfam:IPR011638"
+ /inference="protein motif:HMMTigr:IPR004702"
+ /inference="protein motif:ScanRegExp:IPR000719"
+ /inference="similar to AA sequence:INSD:"
+ /note="'KEGG: sty:STY2954 7.6e-166 srlE; PTS system,
+ glucitol/sorbitol-specific IIBC component K02782:K02783;
+ COG: COG3732 Phosphotransferase system sorbitol-specific
+ component IIBC;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569234.1"
+ /db_xref="GI:161502122"
+ /db_xref="InterPro:IPR000719"
+ /db_xref="InterPro:IPR004702"
+ /db_xref="InterPro:IPR011618"
+ /db_xref="InterPro:IPR011638"
+ /translation="MTRVRIEKGAGGWGGPLELNVTSGKKIVYITAGTRPAIVDKLAQ
+ LTGWQAVDGFKEGEPPEAEIGAAIIDCGGTLRCGIYPKRRIPTINIHSTGKSGPLAQY
+ IVEDIYVSGVKEENLTLVGETSASPQPAAATAGRDYDTSKKITEQSDGLLAKVGMGMG
+ SAVAVLFQSGRDTIDTVLKTILPFMAFVSALIGIIMASGLGDWIAHGLAPLASHPLGL
+ VTLALICSFPLLSPFLGPGAVIAQVIGVLIGVQIGLGNIPPHLALPALFAINAQAACD
+ FIPVGLSLAEAKQDTVRVGVPSVLVGRFLTGAPTVLIAWFVSGFIYQ"
+ misc_feature complement(132805..133770)
+ /locus_tag="SARI_00139"
+ /note="PTS system, glucitol/sorbitol-specific, IIBC
+ component; Region: EIIBC-GUT; TIGR00825"
+ /db_xref="CDD:129905"
+ misc_feature complement(133249..133764)
+ /locus_tag="SARI_00139"
+ /note="Sorbitol phosphotransferase enzyme II N-terminus;
+ Region: EIIBC-GUT_N; pfam03612"
+ /db_xref="CDD:217639"
+ misc_feature complement(132808..133086)
+ /locus_tag="SARI_00139"
+ /note="Sorbitol phosphotransferase enzyme II C-terminus;
+ Region: EIIBC-GUT_C; pfam07663"
+ /db_xref="CDD:148973"
+ gene complement(133770..134390)
+ /locus_tag="SARI_00140"
+ CDS complement(133770..134390)
+ /locus_tag="SARI_00140"
+ /inference="protein motif:HMMPfam:IPR004699"
+ /inference="protein motif:HMMTigr:IPR004699"
+ /inference="similar to AA sequence:REFSEQ:YP_217752.1"
+ /note="'KEGG: sec:SC2765 1.0e-97 srlA; PTS family,
+ glucitol/sorbitol-specific enzyme IIC component,one of two
+ IIC components K02782:K02783;
+ COG: COG3730 Phosphotransferase system sorbitol-specific
+ component IIC;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569235.1"
+ /db_xref="GI:161502123"
+ /db_xref="InterPro:IPR004699"
+ /translation="MIKMNRKLVRKLKTLQERTMIETITHGAEWFIGLFQKGGEVFTG
+ MVTGILPLLISLLVIMNALINFIGQQRIERFAQRCAGNPLSRYLLLPCIGTFVFCNPM
+ TLSLGRFMPEKYKPSYYAAASYSCHSMNGLFPHINPGELFVYLGIASGLTTLGLPLGP
+ LAVSYLLVGLVTNFFRGWVTDLTTAIFEKKMGIQLDQKVHLTGAAS"
+ misc_feature complement(133791..134333)
+ /locus_tag="SARI_00140"
+ /note="PTS system, glucitol/sorbitol-specific, IIC
+ component; Region: EII-GUT; TIGR00821"
+ /db_xref="CDD:129901"
+ gene 134586..135668
+ /locus_tag="SARI_00141"
+ CDS 134586..135668
+ /locus_tag="SARI_00141"
+ /inference="protein motif:HMMTigr:IPR011757"
+ /inference="similar to AA sequence:INSD:AAV78546.1"
+ /note="membrane-bound lytic murein transglycosylase B;
+ catalyzes the cleavage of the glycosidic bonds between
+ N-acetylmuramic acid and N-acetylglucosamine in
+ peptidoglycan"
+ /codon_start=1
+ /transl_table=11
+ /product="murein hydrolase B"
+ /protein_id="YP_001569236.2"
+ /db_xref="GI:448236179"
+ /db_xref="InterPro:IPR011757"
+ /translation="MFKRRYVALLPLCCVLLAACSGTPKSSRTQTAPGTPSGGFLLEP
+ QHNVMRMGGDFANNPNAQQFIDKMVSKHGFDRQQLQEILSQSKKLDYVLRLMDRQAPT
+ TQPPAGPNGAWLRYRKQFITPDNVQNGVAFWNQYEDALNRAWQVYGVPPEIIVGIIGV
+ ETRWGRIMGKTRILDALATLSFNYPRRAEYFSGELETFLLMARNEQDDPLNLKGSFAG
+ AMGYGQFMPSSYKEYAVDFNGDNHINLWDPVDAIGSVANYFKAHGWVKGDVVAIPANG
+ QAPGLANGFKTKYSVSQLAAAGLTPQQSLGNHQEASLLRLDVGTDYQYWYGLPNFYAI
+ TRYNHSTHYAMAVWQLGQAVALARVR"
+ misc_feature 134751..135641
+ /locus_tag="SARI_00141"
+ /note="Transglycosylase SLT domain; Region: SLT_2;
+ pfam13406"
+ /db_xref="CDD:222107"
+ misc_feature 135171..>135389
+ /locus_tag="SARI_00141"
+ /note="Lytic Transglycosylase (LT) and Goose Egg White
+ Lysozyme (GEWL) domain. Members include the soluble and
+ insoluble membrane-bound LTs in bacteria, the LTs in
+ bacteriophage lambda, as well as, the eukaryotic
+ "goose-type" lysozymes (GEWL). LTs...; Region:
+ LT_GEWL; cd00254"
+ /db_xref="CDD:238157"
+ misc_feature order(135198..135200,135261..135263,135357..135359)
+ /locus_tag="SARI_00141"
+ /note="N-acetyl-D-glucosamine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:238157"
+ misc_feature 135198..135200
+ /locus_tag="SARI_00141"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:238157"
+ gene 135851..136351
+ /locus_tag="SARI_00142"
+ CDS 135851..136351
+ /locus_tag="SARI_00142"
+ /inference="protein motif:HMMPfam:IPR008136"
+ /inference="protein motif:HMMPIR:IPR012244"
+ /inference="protein motif:HMMTigr:IPR008136"
+ /inference="similar to AA sequence:REFSEQ:NP_461751.1"
+ /note="'COG: COG1546 Uncharacterized protein (competence-
+ and mitomycin-induced);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="competence damage-inducible protein A"
+ /protein_id="YP_001569237.1"
+ /db_xref="GI:161502125"
+ /db_xref="InterPro:IPR008136"
+ /db_xref="InterPro:IPR012244"
+ /translation="MMTDSELMRLSEQVGLALKTRGAIVTTAESCTGGWLAKAITDVA
+ GSSAWFERGFVTYSNEAKAQMIGVREETLAQHGAVSEPVVVEMAIGALKAARADFAIA
+ ISGIAGPDGGSEEKPVGTVWFAFASVSGEGITRRECFSGNRESVRRQATTYALQNLWQ
+ QFLQNT"
+ misc_feature 135854..136345
+ /locus_tag="SARI_00142"
+ /note="hypothetical protein; Validated; Region: PRK03661"
+ /db_xref="CDD:179627"
+ gene 136421..137497
+ /gene="recA"
+ /locus_tag="SARI_00143"
+ CDS 136421..137497
+ /gene="recA"
+ /locus_tag="SARI_00143"
+ /inference="protein motif:BlastProDom:IPR001553"
+ /inference="protein motif:HMMPfam:IPR013765"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR001553"
+ /inference="protein motif:ScanRegExp:IPR001553"
+ /inference="similar to AA sequence:INSD:AAO70291.1"
+ /note="'catalyzes the hydrolysis of ATP in the presence of
+ single-stranded DNA, the ATP-dependent uptake of
+ single-stranded DNA by duplex DNA, and the ATP-dependent
+ hybridization of homologous single-stranded DNAs'"
+ /codon_start=1
+ /transl_table=11
+ /product="recombinase A"
+ /protein_id="YP_001569238.1"
+ /db_xref="GI:161502126"
+ /db_xref="InterPro:IPR001553"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR013765"
+ /translation="MTGVIMAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVE
+ TISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAE
+ HALDPVYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAE
+ IEGEIGDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGG
+ NALKFYASVRLDIRRIGAVKEGDNVVGSETRVKVVKNKIAAPFKQAEFQILYGEGINF
+ YGELVDLGVKEKLIEKAGAWYSYNGEKIGQGKANATTWLKENPATAKEIEKKVRELLL
+ SNQNSSPDFAVDDSEGVAETNEDF"
+ misc_feature 136436..137479
+ /gene="recA"
+ /locus_tag="SARI_00143"
+ /note="recombinase A; Provisional; Region: recA; PRK09354"
+ /db_xref="CDD:236476"
+ misc_feature 136451..137425
+ /gene="recA"
+ /locus_tag="SARI_00143"
+ /note="RecA is a bacterial enzyme which has roles in
+ homologous recombination, DNA repair, and the induction of
+ the SOS response. RecA couples ATP hydrolysis to DNA
+ strand exchange; Region: recA; cd00983"
+ /db_xref="CDD:238483"
+ misc_feature order(136475..136480,136484..136489,136496..136498,
+ 136508..136522,136727..136732,136736..136756,
+ 136769..136774,137075..137077,137087..137089,
+ 137231..137233,137369..137371)
+ /gene="recA"
+ /locus_tag="SARI_00143"
+ /note="hexamer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238483"
+ misc_feature 136634..136657
+ /gene="recA"
+ /locus_tag="SARI_00143"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:238483"
+ misc_feature order(136640..136660,136724..136726,136736..136738,
+ 136745..136747,136868..136870,137018..137020,
+ 137117..137119,137156..137158,137222..137233)
+ /gene="recA"
+ /locus_tag="SARI_00143"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238483"
+ misc_feature 136856..136870
+ /gene="recA"
+ /locus_tag="SARI_00143"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:238483"
+ gene 137614..138114
+ /gene="recX"
+ /locus_tag="SARI_00144"
+ CDS 137614..138114
+ /gene="recX"
+ /locus_tag="SARI_00144"
+ /inference="protein motif:HMMPfam:IPR003783"
+ /inference="similar to AA sequence:SwissProt:Q8Z4D4"
+ /note="binds RecA and inhibits RecA-mediated DNA strand
+ exchange and ATP hydrolysis and coprotease activities"
+ /codon_start=1
+ /transl_table=11
+ /product="recombination regulator RecX"
+ /protein_id="YP_001569239.1"
+ /db_xref="GI:161502127"
+ /db_xref="InterPro:IPR003783"
+ /translation="MSEPTPRRPAYARLLDRAVRILAVRDHSEQELRRKLSAPVMGKN
+ GPEEIDATPDDYERVISWCHEHHYLDDNRFVIRFIASRSRKGYGPARIRQELNQKGIA
+ RESTEKAMRECDIDWSEMAREQAVRKYGEPLPSTFSEKVKVQRFLLYRGYLMDDIQEI
+ WRNFAD"
+ misc_feature 137620..138111
+ /gene="recX"
+ /locus_tag="SARI_00144"
+ /note="recombination regulator RecX; Reviewed; Region:
+ recX; PRK00117"
+ /db_xref="CDD:234646"
+ gene complement(138240..138623)
+ /locus_tag="SARI_00145"
+ CDS complement(138240..138623)
+ /locus_tag="SARI_00145"
+ /inference="similar to AA sequence:INSD:AAG57802.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569240.1"
+ /db_xref="GI:161502128"
+ /translation="MVTCSVSDVFQIVVFPPRAYTALGSGCTGIITLIKPKENILELV
+ HPGIGKQQRGVIVGHQGTAGNYLMSFTMEKVEKRLTDLSGALAHNYPEIKLHVLLQAF
+ SALAANSPVANFDMFPRLTYRLDAA"
+ misc_feature complement(<138327..138506)
+ /locus_tag="SARI_00145"
+ /note="RecA-like NTPases. This family includes the NTP
+ binding domain of F1 and V1 H+ATPases, DnaB and related
+ helicases as well as bacterial RecA and related eukaryotic
+ and archaeal recombinases. This group also includes
+ bacterial conjugation proteins and...; Region:
+ RecA-like_NTPases; cl17233"
+ /db_xref="CDD:247787"
+ misc_feature complement(order(138426..138434,138444..138446,
+ 138450..138452))
+ /locus_tag="SARI_00145"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:238540"
+ misc_feature complement(order(138327..138329,138333..138335,
+ 138426..138434,138444..138446))
+ /locus_tag="SARI_00145"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238540"
+ gene 138360..140990
+ /locus_tag="SARI_00146"
+ CDS 138360..140990
+ /locus_tag="SARI_00146"
+ /inference="protein motif:FPrintScan:IPR002318"
+ /inference="protein motif:HMMPfam:IPR002318"
+ /inference="protein motif:HMMPfam:IPR003156"
+ /inference="protein motif:HMMPfam:IPR012947"
+ /inference="protein motif:HMMTigr:IPR002318"
+ /note="'KEGG: stm:STM2827 0. alaS; alanyl-tRNA synthetase
+ K01872;
+ COG: COG0013 Alanyl-tRNA synthetase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="alanyl-tRNA ligase"
+ /protein_id="YP_001569241.2"
+ /db_xref="GI:448236180"
+ /db_xref="InterPro:IPR002318"
+ /db_xref="InterPro:IPR003156"
+ /db_xref="InterPro:IPR012947"
+ /translation="MSKSTAEIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGM
+ NQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDY
+ FKHDAIQFAWELLTGENWFALPKERLWVTVYETDDEAYGIWEKEVGIPRERIIRIGDN
+ KGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQ
+ FNRQADGTMEPLPKPSVDTGMGLERIAAVLQHVNSNYEIDLFRTLIEAVAKVTGATDL
+ SNKSLRVIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKL
+ VGPLIEVMGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDG
+ ETAFRLYDTYGFPVDLTADVCRERDIKVDEAGFETAMEEQRRRAREASGFGADYNAMI
+ RVDSASEFKGYDHLELNGKVTALFVNGKAVEAINAGQEAVVVLDQTPFYAESGGQVGD
+ KGELKGVGFTFAVNDTQKYGQAIGHLGKLSAGALKVGDVVQADVDEARRARIRLNHSA
+ THLMHAALRQVLGAHVAQKGSLVSDKVLRFDFSHNEAMKPSEIREVEDLVNAQIRRNL
+ PIETHIMELEAAKAKGAMALFGEKYDERVRVLSMGDFSTELCGGTHARRTGDIGLFRI
+ ISESGTAAGVRRIEAVTGEGAMATVHAQSDRLNDIAHLLKGDSQNLGDKVRAVLERSR
+ QLEKELQQLKDQAAAQESASLSSKAVDLNGVKLLVSELAGVEPKMLRTMVDDLKNQLG
+ STVIVLATVVEGKVSLIAGVSKDVTGRVKAGELIGMVAQQVGGKGGGRPDMAQAGGTD
+ AAALPAALASVQDWVSAKLQ"
+ misc_feature 138363..140984
+ /locus_tag="SARI_00146"
+ /note="alanyl-tRNA synthetase; Reviewed; Region: alaS;
+ PRK00252"
+ /db_xref="CDD:234701"
+ misc_feature 138372..139112
+ /locus_tag="SARI_00146"
+ /note="Alanyl-tRNA synthetase (AlaRS) class II core
+ catalytic domain. AlaRS is a homodimer. It is responsible
+ for the attachment of alanine to the 3' OH group of
+ ribose of the appropriate tRNA. This domain is primarily
+ responsible for ATP-dependent...; Region: AlaRS_core;
+ cd00673"
+ /db_xref="CDD:238360"
+ misc_feature 138426..138440
+ /locus_tag="SARI_00146"
+ /note="motif 1; other site"
+ /db_xref="CDD:238360"
+ misc_feature order(138507..138509,138513..138515,138567..138569,
+ 138630..138632,138636..138638,138642..138650,
+ 138987..138992,139002..139004,139059..139064,
+ 139074..139079,139086..139088)
+ /locus_tag="SARI_00146"
+ /note="active site"
+ /db_xref="CDD:238360"
+ misc_feature 138564..138572
+ /locus_tag="SARI_00146"
+ /note="motif 2; other site"
+ /db_xref="CDD:238360"
+ misc_feature 139071..139088
+ /locus_tag="SARI_00146"
+ /note="motif 3; other site"
+ /db_xref="CDD:238360"
+ misc_feature 140316..140444
+ /locus_tag="SARI_00146"
+ /note="Threonyl and Alanyl tRNA synthetase second
+ additional domain; Region: tRNA_SAD; smart00863"
+ /db_xref="CDD:197931"
+ misc_feature 140754..>140906
+ /locus_tag="SARI_00146"
+ /note="DHHA1 domain; Region: DHHA1; pfam02272"
+ /db_xref="CDD:216955"
+ gene 141225..141410
+ /locus_tag="SARI_00147"
+ CDS 141225..141410
+ /locus_tag="SARI_00147"
+ /inference="protein motif:BlastProDom:IPR003751"
+ /inference="protein motif:HMMPfam:IPR003751"
+ /inference="protein motif:HMMTigr:IPR003751"
+ /inference="protein motif:superfamily:IPR008994"
+ /inference="similar to AA sequence:INSD:AAN44211.1"
+ /note="affects carbohydrate metabolism; has regulatory
+ role in many processes"
+ /codon_start=1
+ /transl_table=11
+ /product="carbon storage regulator"
+ /protein_id="YP_001569242.1"
+ /db_xref="GI:161502130"
+ /db_xref="InterPro:IPR003751"
+ /db_xref="InterPro:IPR008994"
+ /translation="MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHR
+ EEIYQRIQAEKSQQSSY"
+ misc_feature 141225..141404
+ /locus_tag="SARI_00147"
+ /note="carbon storage regulator; Provisional; Region:
+ PRK01712"
+ /db_xref="CDD:234973"
+ unsure 141579..141805
+ /note="Sequence derived from one plasmid subclone"
+ gene 141724..141813
+ /locus_tag="SARI_00148"
+ tRNA 141724..141813
+ /locus_tag="SARI_00148"
+ /product="tRNA-Ser"
+ gene 141821..141894
+ /locus_tag="SARI_00149"
+ tRNA 141821..141894
+ /locus_tag="SARI_00149"
+ /product="tRNA-Arg"
+ gene 141957..142030
+ /locus_tag="SARI_00150"
+ tRNA 141957..142030
+ /locus_tag="SARI_00150"
+ /product="tRNA-Arg"
+ gene 142096..142169
+ /locus_tag="SARI_00151"
+ tRNA 142096..142169
+ /locus_tag="SARI_00151"
+ /product="tRNA-Arg"
+ gene 142235..142308
+ /locus_tag="SARI_00152"
+ tRNA 142235..142308
+ /locus_tag="SARI_00152"
+ /product="tRNA-Arg"
+ gene 142560..143126
+ /locus_tag="SARI_00153"
+ CDS 142560..143126
+ /locus_tag="SARI_00153"
+ /inference="protein motif:FPrintScan:IPR005833"
+ /inference="protein motif:HMMPfam:IPR005834"
+ /inference="protein motif:HMMTigr:IPR006402"
+ /inference="protein motif:HMMTigr:IPR010976"
+ /inference="similar to AA sequence:INSD:AAL21705.1"
+ /note="'YqaB; catalyzes the dephosphorylation of fructose
+ 1-phosphate, 6-phosphogluconate and p-nitrophenyl
+ phosphate (pNPP); presents beta-phosphoglucomutase
+ activity at a lower extent'"
+ /codon_start=1
+ /transl_table=11
+ /product="fructose-1-phosphatase"
+ /protein_id="YP_001569243.1"
+ /db_xref="GI:161502131"
+ /db_xref="InterPro:IPR005833"
+ /db_xref="InterPro:IPR005834"
+ /db_xref="InterPro:IPR006402"
+ /db_xref="InterPro:IPR010976"
+ /translation="MYARYAGLIFDMDGTLLDTEPTHRKAWREVLGRYGLRFDKQAMV
+ ALNGSPTWRIAQSIIELNHADLDPRSLAREKTDTVKSILLDCVEPLPLVEVVKAWYGR
+ RPLSVGTGSESAIAEALLAHLGLRRYFDAVVAADHVQHHKPAPDTFLLCAQRMGVMPA
+ QCVVFEDADFGLQAARAAGMDAVDVRLL"
+ misc_feature 142560..143123
+ /locus_tag="SARI_00153"
+ /note="fructose-1-P/6-phosphogluconate phosphatase;
+ Provisional; Region: PRK10725"
+ /db_xref="CDD:182679"
+ misc_feature <142884..143108
+ /locus_tag="SARI_00153"
+ /note="Haloacid dehalogenase-like hydrolases. The haloacid
+ dehalogenase-like (HAD) superfamily includes L-2-haloacid
+ dehalogenase, epoxide hydrolase, phosphoserine
+ phosphatase, phosphomannomutase, phosphoglycolate
+ phosphatase, P-type ATPase, and many others; Region:
+ HAD_like; cd01427"
+ /db_xref="CDD:119389"
+ misc_feature 142884..142886
+ /locus_tag="SARI_00153"
+ /note="motif II; other site"
+ /db_xref="CDD:119389"
+ gene 143123..143548
+ /locus_tag="SARI_00154"
+ CDS 143123..143548
+ /locus_tag="SARI_00154"
+ /inference="similar to AA sequence:INSD:AAL21704.1"
+ /note="'COG: COG1238 Predicted membrane protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569244.1"
+ /db_xref="GI:161502132"
+ /translation="MSDGLSLLSLFASSFLSATLLPGNSEVVLVAMMVSGVSHPWILV
+ LTATMGNSLGGVTNVILGRFFPLRKTSRWQEKAAGWLKRYGAATLLLSWMPIIGDLLC
+ LLAGWMRIPWGRTIFFLCLGKALRYVALAAATIQGMMWW"
+ misc_feature <143186..143545
+ /locus_tag="SARI_00154"
+ /note="Predicted membrane protein [Function unknown];
+ Region: COG1238"
+ /db_xref="CDD:224159"
+ gene 143626..145182
+ /locus_tag="SARI_00155"
+ CDS 143626..145182
+ /locus_tag="SARI_00155"
+ /inference="protein motif:HMMPfam:IPR007370"
+ /inference="protein motif:HMMTigr:IPR006334"
+ /inference="similar to AA sequence:INSD:AAL21703.1"
+ /note="involved in the first step of glutathione
+ biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="glutamate--cysteine ligase"
+ /protein_id="YP_001569245.1"
+ /db_xref="GI:161502133"
+ /db_xref="InterPro:IPR006334"
+ /db_xref="InterPro:IPR007370"
+ /translation="MIPDVSQALAWLEKHPQALKGIQRGLERETLRVNADGTLATTGH
+ PEALGSALTHKWITTDFAEALLEFITPVDGDIQHMLTFMRDLHRYTARKLGDERMWPL
+ SMPCYIAEGQDIELAQYGTSNTGRFKTLYREGLKNRYGALMQTISGVHYNFSLPMAFW
+ QAKCGVTEGDAAKEKISAGYFRLIRNYYRFGWVIPYLFGASPAICSSFLQGKPTTLPF
+ EKTDCGMYYLPYATSLRLSDLGYTNKSQSNLGITFNDLHEYVAGLKRAIKTPSEEYVQ
+ IGLEKDGKRLQINSNVLQIENELYAPIRPKRVTRSGESPSDALLRGGIEYIEVRSLDI
+ NPFSPIGVDEQQVRFLDLFMVWCVLADAPEMSSSELLCTRANWNRVILEGRKPGLTLG
+ IGCETAQFPLPKVGKDLFRDLRRVAQTLDSIHGGEDYQKVCDELVACFDNPELTFSAR
+ ILRSMIDTGIGGTGKAFGEAYRNLLREEPLEILQEEEFIAERDASVRRQQEIEAADTE
+ PFAAWLAKHD"
+ misc_feature 143629..145176
+ /locus_tag="SARI_00155"
+ /note="glutamate--cysteine ligase; Provisional; Region:
+ PRK02107"
+ /db_xref="CDD:235001"
+ gene complement(145190..145265)
+ /locus_tag="SARI_00156"
+ misc_RNA complement(145190..145265)
+ /locus_tag="SARI_00156"
+ /product="SraD RNA"
+ /inference="nucleotide motif:Rfam:RF00078"
+ /note="Rfam score 80.82"
+ gene 145332..145847
+ /locus_tag="SARI_00157"
+ CDS 145332..145847
+ /locus_tag="SARI_00157"
+ /inference="protein motif:BlastProDom:IPR003815"
+ /inference="protein motif:HMMPfam:IPR003815"
+ /inference="protein motif:HMMPIR:IPR003815"
+ /inference="similar to AA sequence:INSD:AAR88507.1"
+ /note="catalyzes the hydrolysis of S-ribosylhomocysteine
+ to homocysteine and autoinducer-2"
+ /codon_start=1
+ /transl_table=11
+ /product="S-ribosylhomocysteinase"
+ /protein_id="YP_001569246.1"
+ /db_xref="GI:161502134"
+ /db_xref="InterPro:IPR003815"
+ /translation="MPLLDSFAVDHTRMQAPAVRVAKTMNTPHGDTITVFDLRFCVPN
+ KEVMPEKGIHTLEHLFAGFMRDHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVAD
+ AWKAAMADVLKVQDQNQIPELNVYQCGTWQMHSLNEAQEIARHILDCDIRVNNNTELA
+ LPKEKLQELHI"
+ misc_feature 145332..145814
+ /locus_tag="SARI_00157"
+ /note="S-ribosylhomocysteinase; Provisional; Region:
+ PRK02260"
+ /db_xref="CDD:179399"
+ gene complement(145977..147515)
+ /locus_tag="SARI_00158"
+ CDS complement(145977..147515)
+ /locus_tag="SARI_00158"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="protein motif:HMMTigr:IPR004638"
+ /inference="similar to AA sequence:REFSEQ:NP_461741.1"
+ /note="'KEGG: sgl:SG1466 5.5e-07 deTHIobiotin synthase
+ K01935;
+ COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569247.1"
+ /db_xref="GI:161502135"
+ /db_xref="InterPro:IPR004638"
+ /db_xref="InterPro:IPR011701"
+ /translation="MQQQKPLEGAQLVIMTIALSLATFMQVLDSTIANVAIPTIAGNL
+ GSSLSQGTWVITSFGVANAISIPLTGWLAKRFGEVKLFMWSTVAFAAASWACGVSSSL
+ NMLIFFRVVQGVVAGPLIPLSQSLLLNNYPPAKRSIALALWSMTVIVAPICGPILGGY
+ ISDNYHWGWIFFINVPIGVAVVLMTLQTLRGRETRTERRRIDAIGLALLVIGIGSLQI
+ MLDRGKELDWFSSQEIIILTVVAVIAISFLIVWELTDDHPIVDLSLFKSRNFTIGCLC
+ ISLAYMLYFGAIVLLPQLLQEVYGYTATWAGLASAPVGIIPVILSPIIGRFAHKLDMR
+ RLVTFSFIMYAVCFYWRAWTFEPGMDFGASAWPQFIQGFAVACFFMPLTTITLSGLPP
+ ERLAAASSLSNFTRTLAGSIGTSITTTMWTDRESLHHAQLTESVTAYNPNAQAMYDKL
+ EGLGMTRQQASGWIAQQITNQGLIISANEIFWMSAGIFLVLLGLVWFAKPPFGAGGGG
+ GGAH"
+ misc_feature complement(146022..147479)
+ /locus_tag="SARI_00158"
+ /note="drug resistance transporter, EmrB/QacA subfamily;
+ Region: efflux_EmrB; TIGR00711"
+ /db_xref="CDD:129794"
+ misc_feature complement(<146964..147470)
+ /locus_tag="SARI_00158"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature complement(order(147063..147065,147081..147086,
+ 147093..147098,147132..147134,147141..147146,
+ 147153..147158,147165..147170,147306..147311,
+ 147315..147320,147330..147332,147339..147344,
+ 147351..147353,147402..147407,147411..147419,
+ 147426..147428))
+ /locus_tag="SARI_00158"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ misc_feature complement(146250..>146732)
+ /locus_tag="SARI_00158"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ gene complement(147532..148731)
+ /locus_tag="SARI_00159"
+ CDS complement(147532..148731)
+ /locus_tag="SARI_00159"
+ /inference="protein motif:HMMPfam:IPR006143"
+ /inference="protein motif:HMMTigr:IPR005694"
+ /inference="protein motif:superfamily:IPR011053"
+ /inference="similar to AA sequence:REFSEQ:YP_217735.1"
+ /note="'COG: COG1566 Multidrug resistance efflux pump;
+ Psort location: golgi, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569248.1"
+ /db_xref="GI:161502136"
+ /db_xref="InterPro:IPR005694"
+ /db_xref="InterPro:IPR006143"
+ /db_xref="InterPro:IPR011053"
+ /translation="MNNKIVENNMSANAEIQTPQQSAKKKGKRKTALLLLTLLFIIIA
+ VAYGIYWFLVLRHIEETDDAYVAGNQVQIMAQVSGSVTKVWADNTDFVKEGDVLVTLD
+ QTDARQAFERAKTALASSVRQTHQLMINSKQLQANIDVQKTALAQAQSDFNRRVPLGN
+ ANLIGREELQHARDAVASAQAKLDAAIQQYNANQAMILNSKLEDQPAVQQAATEVRNA
+ WLALERTRIVSPMTGYVSRRAVQPGAQISPTTPLMAVVPATDLWVDANFKETQLANMR
+ IGQPVTIITDIYGDDVKYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVVQRLPVRVEL
+ DARQLEQHPLRIGLSTLVTVDTANRDGQVLASQVRTKPVAESNAREINLAPVNKLIDD
+ IVQANAG"
+ misc_feature complement(147535..148704)
+ /locus_tag="SARI_00159"
+ /note="multidrug efflux system protein EmrA; Provisional;
+ Region: PRK15136"
+ /db_xref="CDD:185090"
+ misc_feature complement(148378..148527)
+ /locus_tag="SARI_00159"
+ /note="Biotin-lipoyl like; Region: Biotin_lipoyl_2;
+ pfam13533"
+ /db_xref="CDD:205711"
+ misc_feature complement(<147826..148056)
+ /locus_tag="SARI_00159"
+ /note="HlyD family secretion protein; Region: HlyD_3;
+ pfam13437"
+ /db_xref="CDD:222128"
+ gene complement(148831..149361)
+ /locus_tag="SARI_00160"
+ CDS complement(148831..149361)
+ /locus_tag="SARI_00160"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000835"
+ /inference="protein motif:HMMSmart:IPR000835"
+ /inference="protein motif:ScanRegExp:IPR000835"
+ /inference="similar to AA sequence:INSD:AAX66653.1"
+ /note="DNA-binding transcriptional repressor of microcin
+ B17 synthesis and multidrug efflux; negative regulator of
+ the multidrug operon emrAB"
+ /codon_start=1
+ /transl_table=11
+ /product="transcriptional repressor MprA"
+ /protein_id="YP_001569249.1"
+ /db_xref="GI:161502137"
+ /db_xref="InterPro:IPR000835"
+ /db_xref="InterPro:IPR011991"
+ /translation="MDSSFTPIEQMLKFRASRHEDFPYQEILLTRLCMHMQGKLLENR
+ NKMLKAQGINETLFMALITLESQENHSIQPSELSCALGSSRTNATRIADELEKRGWIE
+ RRESDNDRRCLHLQLTEKGQAFLQEVLPPQHHCLHQLWSSLSTAEKDQLEHITRKLLT
+ RLDQMEQEGTVLEALR"
+ misc_feature complement(148834..149361)
+ /locus_tag="SARI_00160"
+ /note="transcriptional repressor MprA; Provisional;
+ Region: PRK10870"
+ /db_xref="CDD:182795"
+ misc_feature complement(148918..149226)
+ /locus_tag="SARI_00160"
+ /note="helix_turn_helix multiple antibiotic resistance
+ protein; Region: HTH_MARR; smart00347"
+ /db_xref="CDD:197670"
+ gene complement(149858..151042)
+ /locus_tag="SARI_00161"
+ CDS complement(149858..151042)
+ /locus_tag="SARI_00161"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="similar to AA sequence:REFSEQ:YP_151845.1"
+ /note="'KEGG: shn:Shewana3_1692 6.3e-17 Xaa-His
+ dipeptidase K01270;
+ COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569250.1"
+ /db_xref="GI:161502138"
+ /db_xref="InterPro:IPR011701"
+ /translation="MTKPTHGLSPALIVLMSVATGLAVASNYYAQPLLDTIAHHFSLS
+ ASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRTLIVSMTLLAAGGMLITASSQSLSMM
+ ILGTALTGLFSVVAQILVPLAATLATPATRGKVVGTIMSGLLLGILLARTVAGLLANL
+ GGWRTVFWLASALMALMAVALWRGLPKLKSDTHLNYPQLLGSVFSLFIHDKLLRTRAL
+ LGCLTFANFSILWTSMAFLLAAPPFNYSEGMIGLFGLAGAAGALGARPAGGFVDKGKS
+ HLTTTVGLLLLLLSWLAIWLGHTSVLALIIGILVLDLTVQGVHITNQTVIYRLHPDAR
+ NRLTAGYMTSYFIGGAAGSLISASAWQHAGWIGVCLAGVTVALFNLLIWWRGFHRQEA
+ VN"
+ misc_feature complement(<150362..151042)
+ /locus_tag="SARI_00161"
+ /note="Arabinose efflux permease [Carbohydrate transport
+ and metabolism]; Region: AraJ; COG2814"
+ /db_xref="CDD:225371"
+ misc_feature complement(<150539..151006)
+ /locus_tag="SARI_00161"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ gene complement(151207..152202)
+ /gene="proX"
+ /locus_tag="SARI_00162"
+ CDS complement(151207..152202)
+ /gene="proX"
+ /locus_tag="SARI_00162"
+ /inference="protein motif:HMMPfam:IPR007210"
+ /inference="similar to AA sequence:INSD:"
+ /note="'with ProVW, part of the high-affinity transport
+ system for the osmoprotectant glycine betaine'"
+ /codon_start=1
+ /transl_table=11
+ /product="glycine betaine transporter periplasmic subunit"
+ /protein_id="YP_001569251.1"
+ /db_xref="GI:161502139"
+ /db_xref="InterPro:IPR007210"
+ /translation="MRHTVIFASAFATLVTASAWASDLPGKGITVHPIQSTISEESFQ
+ TLLVSRALEKLGYTVNKPSEVDYNVGYTSIASGDATFTAVNWQPLHDDMYAAAGGDKK
+ FYREGVFVSGAAQGYLIDKKTADQYNITNIAQLKDPKIAKIFDTNGDGKADMMGCSPG
+ WGCEAVINHQNKAFELQKTVEVSHGNYAAMMADTITRFKEGKPVLYYTWTPYWVSDVM
+ KPGKDVVWLQVPFSSLPGEQKNINTKLPNGANYGFPVNTMHIVANKAWAEKNPAAAKL
+ FAIMKLPLADINAQNAMMHAGKSSEADVQGHVDGWINAHQQQFDGWVKEALAAQK"
+ misc_feature complement(151210..152202)
+ /gene="proX"
+ /locus_tag="SARI_00162"
+ /note="glycine betaine transporter periplasmic subunit;
+ Provisional; Region: proX; PRK11119"
+ /db_xref="CDD:236852"
+ misc_feature complement(151261..152088)
+ /gene="proX"
+ /locus_tag="SARI_00162"
+ /note="Substrate binding domain of ABC-type glycine
+ betaine transport system; Region: OpuAC; pfam04069"
+ /db_xref="CDD:217871"
+ gene complement(152272..153336)
+ /locus_tag="SARI_00163"
+ CDS complement(152272..153336)
+ /locus_tag="SARI_00163"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="similar to AA sequence:REFSEQ:NP_806413.1"
+ /note="with ProVX is involved in the high-affinity uptake
+ of glycine betaine"
+ /codon_start=1
+ /transl_table=11
+ /product="glycine betaine transporter membrane protein"
+ /protein_id="YP_001569252.1"
+ /db_xref="GI:161502140"
+ /db_xref="InterPro:IPR000515"
+ /translation="MADQTNPWDTAQVADTTAQTADAWGTPAGVATDGGSTDWLNNGP
+ APAPEHFSLLDPFHKTLIPLDSWVTEGIDWVVTHFRPLFQGIRVPVDYILNGFQQLLL
+ GMPAPVAIILFALIAWQVSGVGMGIAALISLIAIGAIGAWSQAMITLALVLTALLFCV
+ VIGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGIGNVPGVVVTIIFA
+ LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLAL
+ SMVVIASMIAVGGLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRLTQAVGRDSRSR
+ GNRRWYTTGPVGLITRPFVK"
+ misc_feature complement(152275..153336)
+ /locus_tag="SARI_00163"
+ /note="glycine betaine transporter membrane protein;
+ Provisional; Region: PRK10952"
+ /db_xref="CDD:236805"
+ misc_feature complement(152464..152904)
+ /locus_tag="SARI_00163"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(152485..152490,152497..152508,
+ 152527..152529,152536..152541,152581..152583,
+ 152632..152634,152641..152646,152656..152658,
+ 152662..152667,152674..152676,152680..152682,
+ 152686..152691,152737..152739,152743..152748,
+ 152755..152784,152788..152799,152824..152826,
+ 152839..152844,152851..152856))
+ /locus_tag="SARI_00163"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(152491..152508,152737..152781))
+ /locus_tag="SARI_00163"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(152488..152490,152704..152706,
+ 152737..152739))
+ /locus_tag="SARI_00163"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(152560..152562,152572..152577,
+ 152593..152631))
+ /locus_tag="SARI_00163"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene complement(153329..154531)
+ /locus_tag="SARI_00164"
+ CDS complement(153329..154531)
+ /locus_tag="SARI_00164"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR000644"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR005892"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:SwissProt:P17328"
+ /note="with ProWX is involved in the high-affinity uptake
+ of glycine betaine"
+ /codon_start=1
+ /transl_table=11
+ /product="glycine betaine transporter ATP-binding subunit"
+ /protein_id="YP_001569253.1"
+ /db_xref="GI:161502141"
+ /db_xref="InterPro:IPR000644"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR005892"
+ /translation="MAIKLEVKNLYKIFGEHPQRAFKYIEKGLSKEQILEKTGLSLGV
+ KDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELRE
+ VRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGIAAQERREKALDALRQVGLENYAHA
+ YPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTI
+ VFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYVRTFFRGVDISQVFSA
+ KDIARRSPVGLIRKTPGFGPRSALKLLQDEDREYGYVIERGNKFVGVVSIDSLKAALS
+ QAQGIEAALIDDPLVVDAQTPLSELLSHVGQAPCAVPVVDEEHQYVGIISKRMLLQAL
+ DREGGNNG"
+ misc_feature complement(153332..154531)
+ /locus_tag="SARI_00164"
+ /note="glycine betaine transporter ATP-binding subunit;
+ Provisional; Region: PRK10070"
+ /db_xref="CDD:182221"
+ misc_feature complement(153713..154519)
+ /locus_tag="SARI_00164"
+ /note="ATP-binding cassette domain of the osmoprotectant
+ proline/glycine betaine uptake system; Region:
+ ABC_Pro_Gly_Betaine; cd03294"
+ /db_xref="CDD:213261"
+ misc_feature complement(154328..154351)
+ /locus_tag="SARI_00164"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213261"
+ misc_feature complement(order(153863..153865,153962..153967,
+ 154193..154195,154325..154333,154337..154342))
+ /locus_tag="SARI_00164"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213261"
+ misc_feature complement(154193..154204)
+ /locus_tag="SARI_00164"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213261"
+ misc_feature complement(154010..154039)
+ /locus_tag="SARI_00164"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213261"
+ misc_feature complement(153962..153979)
+ /locus_tag="SARI_00164"
+ /note="Walker B; other site"
+ /db_xref="CDD:213261"
+ misc_feature complement(153944..153955)
+ /locus_tag="SARI_00164"
+ /note="D-loop; other site"
+ /db_xref="CDD:213261"
+ misc_feature complement(153857..153877)
+ /locus_tag="SARI_00164"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213261"
+ misc_feature complement(153359..153670)
+ /locus_tag="SARI_00164"
+ /note="This cd contains two tandem repeats of the
+ cystathionine beta-synthase (CBS pair) domains in
+ association with the ABC transporter OpuCA. OpuCA is the
+ ATP binding component of a bacterial solute transporter
+ that serves a protective role to cells growing...; Region:
+ CBS_pair_ABC_OpuCA_assoc2; cd04583"
+ /db_xref="CDD:239956"
+ gene complement(154886..155845)
+ /gene="nrdF"
+ /locus_tag="SARI_00165"
+ CDS complement(154886..155845)
+ /gene="nrdF"
+ /locus_tag="SARI_00165"
+ /inference="protein motif:Gene3D:IPR012348"
+ /inference="protein motif:HMMPfam:IPR000358"
+ /inference="protein motif:ScanRegExp:IPR000358"
+ /inference="protein motif:superfamily:IPR009078"
+ /inference="similar to AA sequence:PDB:2BQ1"
+ /note="B2 or R2 protein; type 1b enzyme; catalyzes the
+ rate-limiting step in dNTP synthesis; converts nucleotides
+ to deoxynucleotides; forms a homodimer and then a
+ multimeric complex with NrdE"
+ /codon_start=1
+ /transl_table=11
+ /product="ribonucleotide-diphosphate reductase subunit
+ beta"
+ /protein_id="YP_001569254.1"
+ /db_xref="GI:161502142"
+ /db_xref="InterPro:IPR000358"
+ /db_xref="InterPro:IPR009078"
+ /db_xref="InterPro:IPR012348"
+ /translation="MKLSRISAINWNKIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPA
+ WQTLNAAEQQLTIRVFTGLTLLDTIQNIAGAPSLMADAITPHEEAVLSNISFMEAVHA
+ RSYSSIFSTLCQSKDVDAAYAWSEENPQLQRKAQIMMTHYVSDEPLKKKIASVFLESF
+ LFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQIALQKQSAIEREEL
+ KLFALDLLMELYDNETRYTEALYAETDWVDDVKAFLCYNANKALMNLGYEALFPPEMA
+ DVNPAILAALSPNADENHDFFSGSGSSYVMGKAVETEDEDWNF"
+ misc_feature complement(154889..155839)
+ /gene="nrdF"
+ /locus_tag="SARI_00165"
+ /note="ribonucleotide-diphosphate reductase subunit beta;
+ Provisional; Region: nrdF2; PRK13966"
+ /db_xref="CDD:140022"
+ misc_feature complement(155006..155821)
+ /gene="nrdF"
+ /locus_tag="SARI_00165"
+ /note="Ribonucleotide Reductase, R2/beta subunit,
+ ferritin-like diiron-binding domain; Region: RNRR2;
+ cd01049"
+ /db_xref="CDD:153108"
+ misc_feature complement(order(155468..155470,155477..155482,
+ 155528..155530,155537..155539,155546..155551,
+ 155558..155560,155567..155572,155765..155767,
+ 155786..155788,155819..155821))
+ /gene="nrdF"
+ /locus_tag="SARI_00165"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:153108"
+ misc_feature complement(order(155261..155263,155273..155278,
+ 155531..155533,155543..155545,155552..155554,
+ 155645..155647,155753..155755))
+ /gene="nrdF"
+ /locus_tag="SARI_00165"
+ /note="putative radical transfer pathway; other site"
+ /db_xref="CDD:153108"
+ misc_feature complement(order(155261..155263,155270..155272,
+ 155372..155374,155543..155545,155552..155554,
+ 155645..155647))
+ /gene="nrdF"
+ /locus_tag="SARI_00165"
+ /note="diiron center [ion binding]; other site"
+ /db_xref="CDD:153108"
+ misc_feature complement(155531..155533)
+ /gene="nrdF"
+ /locus_tag="SARI_00165"
+ /note="tyrosyl radical; other site"
+ /db_xref="CDD:153108"
+ gene complement(155856..157973)
+ /locus_tag="SARI_00166"
+ CDS complement(155856..157973)
+ /locus_tag="SARI_00166"
+ /inference="protein motif:FPrintScan:IPR000788"
+ /inference="protein motif:HMMPanther:IPR000788"
+ /inference="protein motif:HMMPfam:IPR000788"
+ /inference="protein motif:HMMPfam:IPR013509"
+ /inference="protein motif:HMMPfam:IPR013554"
+ /inference="protein motif:HMMTigr:IPR013346"
+ /inference="protein motif:ScanRegExp:IPR000788"
+ /inference="protein motif:superfamily:IPR008926"
+ /note="Catalyzes the rate-limiting step in dNTP synthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="ribonucleotide-diphosphate reductase subunit
+ alpha"
+ /protein_id="YP_001569255.1"
+ /db_xref="GI:161502143"
+ /db_xref="InterPro:IPR000788"
+ /db_xref="InterPro:IPR008926"
+ /db_xref="InterPro:IPR013346"
+ /db_xref="InterPro:IPR013509"
+ /db_xref="InterPro:IPR013554"
+ /translation="MQETMDYHALNAMLNLYDKAGHIQFDKDQQAVDAFFAAHVRPHS
+ VTFASQDERLDTLVREGYYDDAILARYDRAFVLSLFGHAHASGFRFQTFLGAWKFYTS
+ YTLKTFDGKRYLEHFEDRVTMVALTLAQGDETLATQLTDEMLSGRFQPATPTFLNCGK
+ QQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIQNQ
+ SSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKT
+ LSLGVVIPDITFRLAKENAQMALFSPYDVQRRYGKPFGDIAISERYDELLADSHVRKT
+ YINARDFFQTLAEIQFESGYPYIMFEDTVNRANPIAGRINMSNLCSEILQVNSASRYD
+ DNLDYIHIGHDISCNLGSLNIAHVMDSPDIGRTVETAIRGLTAVSDMSHIRSVPSIAA
+ GNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNFYFYTITWHALHTSMRLARERG
+ KTFAGFAQSRYASGDYFTQYLQDDWQPKTAKVRALFARSGITLPTREMWLKLRDDVMR
+ YGIYNQNLQAVPPTGSISYINHATSSIHPIVAKIEIRKEGKTGRVYYPAPFMTNENLD
+ MYQDAYEIGPEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKSL
+ YYIRLRQLALEGTEIEGCVSCAL"
+ misc_feature complement(155859..157973)
+ /locus_tag="SARI_00166"
+ /note="ribonucleotide-diphosphate reductase subunit alpha;
+ Validated; Region: PRK08188"
+ /db_xref="CDD:236179"
+ misc_feature complement(157710..157955)
+ /locus_tag="SARI_00166"
+ /note="Ribonucleotide reductase N-terminal; Region: RNR_N;
+ pfam08343"
+ /db_xref="CDD:192008"
+ misc_feature complement(<156450..157625)
+ /locus_tag="SARI_00166"
+ /note="Class I ribonucleotide reductase; Region: RNR_I;
+ cd01679"
+ /db_xref="CDD:153088"
+ misc_feature complement(order(156750..156752,156831..156833,
+ 156837..156839,156843..156845,157383..157385,
+ 157467..157472,157515..157520))
+ /locus_tag="SARI_00166"
+ /note="active site"
+ /db_xref="CDD:153088"
+ misc_feature complement(order(157257..157271,157278..157283,
+ 157290..157295,157299..157304,157314..157316,
+ 157350..157352,157395..157397,157404..157409,
+ 157416..157421,157428..157430,157437..157442,
+ 157479..157481))
+ /locus_tag="SARI_00166"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:153088"
+ misc_feature complement(order(156756..156758,156831..156833,
+ 156837..156839,156843..156845,157467..157469))
+ /locus_tag="SARI_00166"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:153088"
+ misc_feature complement(order(157299..157301,157314..157316,
+ 157356..157358,157395..157397,157431..157433,
+ 157440..157448))
+ /locus_tag="SARI_00166"
+ /note="effector binding site; other site"
+ /db_xref="CDD:153088"
+ misc_feature complement(155916..>156272)
+ /locus_tag="SARI_00166"
+ /note="Ribonucleotide reductase and Pyruvate formate
+ lyase; Region: RNR_PFL; cl09939"
+ /db_xref="CDD:245211"
+ gene complement(157973..158383)
+ /gene="nrdI"
+ /locus_tag="SARI_00167"
+ CDS complement(157973..158383)
+ /gene="nrdI"
+ /locus_tag="SARI_00167"
+ /inference="protein motif:HMMPfam:IPR004465"
+ /inference="protein motif:HMMTigr:IPR004465"
+ /inference="similar to AA sequence:REFSEQ:NP_457205.1"
+ /note="in Salmonella NrdI has a stimulatory effect on the
+ ribonucleotide reductase activity of NrdH with NrdEF"
+ /codon_start=1
+ /transl_table=11
+ /product="ribonucleotide reductase stimulatory protein"
+ /protein_id="YP_001569256.1"
+ /db_xref="GI:161502144"
+ /db_xref="InterPro:IPR004465"
+ /translation="MSALVYFSSSSENTHRFMQRLGLPATRIPLNERERIRVDEPYIL
+ VVPSYGGGGMAGAVPRQVIRFLNDEHNRARIRGVIASGNRNFGDAWGCAGDVIAQKCG
+ VPWLYRFELMGTQRDIDHVRKGVNEFWRQQTRSA"
+ misc_feature complement(157982..158383)
+ /gene="nrdI"
+ /locus_tag="SARI_00167"
+ /note="ribonucleotide reductase stimulatory protein;
+ Reviewed; Region: nrdI; PRK03600"
+ /db_xref="CDD:179603"
+ gene complement(158380..158640)
+ /locus_tag="SARI_00168"
+ CDS complement(158380..158640)
+ /locus_tag="SARI_00168"
+ /inference="protein motif:Gene3D:IPR012335"
+ /inference="protein motif:HMMPfam:IPR002109"
+ /inference="protein motif:HMMTigr:IPR011909"
+ /inference="protein motif:superfamily:IPR012336"
+ /inference="similar to AA sequence:INSD:AAX66645.1"
+ /note="'KEGG: vfi:VFA1040 0.00024 glutaredoxin K00435;
+ COG: COG0695 Glutaredoxin and related proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="glutaredoxin-like protein"
+ /protein_id="YP_001569257.1"
+ /db_xref="GI:161502145"
+ /db_xref="InterPro:IPR002109"
+ /db_xref="InterPro:IPR011909"
+ /db_xref="InterPro:IPR012335"
+ /db_xref="InterPro:IPR012336"
+ /translation="MEIRIMSITIYTRNNCVQCHATKRAMESRGFEFEMVNVDLVPDA
+ ADTLRAQGFRQLPVVMAGDLSWSGFRPDMINRLHPAPHAASA"
+ misc_feature complement(158410..158619)
+ /locus_tag="SARI_00168"
+ /note="NrdH-redoxin (NrdH) family; NrdH is a small
+ monomeric protein with a conserved redox active CXXC motif
+ within a TRX fold, characterized by a glutaredoxin
+ (GRX)-like sequence and TRX-like activity profile. In
+ vitro, it displays protein disulfide reductase...; Region:
+ NrdH; cd02976"
+ /db_xref="CDD:239274"
+ misc_feature complement(order(158584..158586,158593..158595))
+ /locus_tag="SARI_00168"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:239274"
+ gene complement(158899..159237)
+ /locus_tag="SARI_00169"
+ CDS complement(158899..159237)
+ /locus_tag="SARI_00169"
+ /inference="protein motif:HMMPfam:IPR010279"
+ /inference="similar to AA sequence:INSD:AAL21687.1"
+ /note="'COG: COG4575 Uncharacterized conserved protein;
+ Psort location: vesicles of secretory system, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569258.1"
+ /db_xref="GI:161502146"
+ /db_xref="InterPro:IPR010279"
+ /translation="MEDHMLNKPNRNDVDDGVQDIQNDVNRLADSLEDVLKSWGSDAK
+ DEAETARRKAQALLKETRARMHGRTRVKQAACDAMGCADTFVREKPWCSVGTAAAVGI
+ FIGALLSLRR"
+ misc_feature complement(158902..159225)
+ /locus_tag="SARI_00169"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10132"
+ /db_xref="CDD:182259"
+ gene 159387..159737
+ /locus_tag="SARI_00170"
+ CDS 159387..159737
+ /locus_tag="SARI_00170"
+ /inference="similar to AA sequence:INSD:CAD05911.1"
+ /note="'COG: NOG09772 non supervised orthologous group;
+ Psort location: cytoskeletal, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569259.1"
+ /db_xref="GI:161502147"
+ /translation="MYLRPDEVARVLEKAGFVVDVVTNKTYGYRRGENYVYVNREARM
+ GRTALIIHPRLKDRSSSLAEPASDIKTCAHYQNFPLYLGGGTHEHYGIPHGFSSRIAL
+ ERYLNGLFGDVTPD"
+ misc_feature 159387..159719
+ /locus_tag="SARI_00170"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10556"
+ /db_xref="CDD:182545"
+ gene complement(159772..160221)
+ /locus_tag="SARI_00171"
+ CDS complement(159772..160221)
+ /locus_tag="SARI_00171"
+ /inference="protein motif:HMMPfam:IPR010574"
+ /inference="similar to AA sequence:INSD:AAL21685.1"
+ /note="'COG: NOG11269 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569260.2"
+ /db_xref="GI:448236181"
+ /db_xref="InterPro:IPR010574"
+ /translation="MFSPQSRLRHAVADTFAMVVYCSVVNMLIEIFLSGMSVEQSLSS
+ RLVAIPVNILIAWPYGVYRDLIMRVARKASPAGWAKNLADVLAYVTFQSPVYIIILLT
+ VGADWHQIMAAVSSNIVVSMLMGAVYGYFLDYCRRLFKVSNYHQAKA"
+ misc_feature complement(159796..160215)
+ /locus_tag="SARI_00171"
+ /note="Protein of unknown function (DUF1144); Region:
+ DUF1144; pfam06610"
+ /db_xref="CDD:148299"
+ gene complement(160436..160633)
+ /locus_tag="SARI_00172"
+ CDS complement(160436..160633)
+ /locus_tag="SARI_00172"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569261.1"
+ /db_xref="GI:161502149"
+ /translation="MIHHNNRLNIQRSLTDFYAKKDAEFALIMLKKRQERFSTRLYAV
+ TDDIQNIAENLQKTIYYNTLI"
+ gene 160909..161310
+ /locus_tag="SARI_00173"
+ CDS 160909..161310
+ /locus_tag="SARI_00173"
+ /inference="protein motif:BlastProDom:IPR001801"
+ /inference="protein motif:HMMPfam:IPR001801"
+ /inference="protein motif:HMMSmart:IPR001801"
+ /inference="similar to AA sequence:INSD:AAO70263.1"
+ /note="'COG: COG2916 DNA-binding protein H-NS;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA binding protein, nucleoid-associated"
+ /protein_id="YP_001569262.1"
+ /db_xref="GI:161502150"
+ /db_xref="InterPro:IPR001801"
+ /translation="MNLMLQKLNNIRTLRAMAREFSIDILEEMLEKFRVVTKERREEE
+ ELQQRQLAEKQEKINTFLELMKADGINPEELFAINSAMPRSAKKRQPRPAKYRFTDFN
+ GEEKTWTGQGRTPKPIAQALAAGKSLDDFLI"
+ misc_feature 160909..161307
+ /locus_tag="SARI_00173"
+ /note="DNA binding protein, nucleoid-associated;
+ Provisional; Region: PRK10328"
+ /db_xref="CDD:182380"
+ misc_feature 161164..161307
+ /locus_tag="SARI_00173"
+ /note="Domain in histone-like proteins of HNS family;
+ Region: HNS; smart00528"
+ /db_xref="CDD:128801"
+ gene complement(161414..161593)
+ /locus_tag="SARI_00174"
+ CDS complement(161414..161593)
+ /locus_tag="SARI_00174"
+ /inference="similar to AA sequence:REFSEQ:YP_217718.1"
+ /note="'COG: NOG35541 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569263.1"
+ /db_xref="GI:161502151"
+ /translation="MFTPGDFVQPRIGGPKLKVIEVNEDHIVAVRVDDEQGEKLTLKA
+ ADVTPYSEGGDFGLC"
+ gene complement(161672..162199)
+ /locus_tag="SARI_00175"
+ CDS complement(161672..162199)
+ /locus_tag="SARI_00175"
+ /inference="protein motif:HMMPfam:IPR001763"
+ /inference="protein motif:HMMSmart:IPR001763"
+ /inference="similar to AA sequence:INSD:CAD05907.1"
+ /note="'KEGG: reh:H16_A0333 7.1e-12 rhodanese-related
+ sulfurtransferase;
+ COG: COG0607 Rhodanese-related sulfurtransferase;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569264.1"
+ /db_xref="GI:161502152"
+ /db_xref="InterPro:IPR001763"
+ /translation="MSIGIVSPREAQALIAQGAKLIDVRDADEYLREHIPHAQLAPLS
+ QLEQGALPANLRAEQIIFHCQSGKRTSSNAAKLQAVAAPAQVSLLEGGIDGWKAAGLP
+ VTEDKSQPLPLMRQVQIAAGGLTLLGVILGYTIHGGFFLISGFVGAGLMLAGLTGFCG
+ MARLLEKMPWNTRTH"
+ misc_feature complement(161891..162184)
+ /locus_tag="SARI_00175"
+ /note="Rhodanese Homology Domain (RHOD); an alpha beta
+ fold domain found duplicated in the rhodanese protein. The
+ cysteine containing enzymatically active version of the
+ domain is also found in the Cdc25 class of protein
+ phosphatases and a variety of proteins...; Region: RHOD;
+ cl00125"
+ /db_xref="CDD:241626"
+ misc_feature complement(162008..162010)
+ /locus_tag="SARI_00175"
+ /note="active site residue [active]"
+ /db_xref="CDD:238089"
+ misc_feature complement(161705..161857)
+ /locus_tag="SARI_00175"
+ /note="Protein of unknown function (DUF2892); Region:
+ DUF2892; pfam11127"
+ /db_xref="CDD:220991"
+ gene complement(162209..162508)
+ /locus_tag="SARI_00176"
+ CDS complement(162209..162508)
+ /locus_tag="SARI_00176"
+ /inference="protein motif:FPrintScan:IPR001845"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR001845"
+ /inference="protein motif:HMMSmart:IPR001845"
+ /inference="similar to AA sequence:REFSEQ:YP_217716.1"
+ /note="'KEGG: reh:H16_A2208 2.8e-06 rhodanese-like:
+ transcriptional regulator, ArsR family;
+ COG: COG0640 Predicted transcriptional regulators;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569265.1"
+ /db_xref="GI:161502153"
+ /db_xref="InterPro:IPR001845"
+ /db_xref="InterPro:IPR011991"
+ /translation="MTALKQLQASAEQAAALLKAMSHPKRLLILCMLCGSPKTSAGEL
+ ARITGLSPSATSQHLARMREEGLIDSQRDAQRIHYFIKNEAVNMLIATLKNLYCP"
+ misc_feature complement(162263..162448)
+ /locus_tag="SARI_00176"
+ /note="Arsenical Resistance Operon Repressor and similar
+ prokaryotic, metal regulated homodimeric repressors. ARSR
+ subfamily of helix-turn-helix bacterial transcription
+ regulatory proteins (winged helix topology). Includes
+ several proteins that appear to...; Region: HTH_ARSR;
+ cd00090"
+ /db_xref="CDD:238042"
+ misc_feature complement(order(162272..162280,162293..162301,
+ 162317..162322,162326..162331,162338..162343,
+ 162347..162358,162383..162388,162392..162394,
+ 162431..162439))
+ /locus_tag="SARI_00176"
+ /note="putative DNA binding site [nucleotide binding];
+ other site"
+ /db_xref="CDD:238042"
+ misc_feature complement(order(162380..162382,162392..162394))
+ /locus_tag="SARI_00176"
+ /note="putative Zn2+ binding site [ion binding]; other
+ site"
+ /db_xref="CDD:238042"
+ gene 162697..162855
+ /locus_tag="SARI_00177"
+ CDS 162697..162855
+ /locus_tag="SARI_00177"
+ /inference="protein motif:HMMPanther:IPR000612"
+ /inference="protein motif:HMMPfam:IPR000612"
+ /inference="protein motif:ScanRegExp:IPR000612"
+ /inference="similar to AA sequence:REFSEQ:NP_457194.1"
+ /note="'COG: COG0401 Uncharacterized homolog of Blt101;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569266.1"
+ /db_xref="GI:161502154"
+ /db_xref="InterPro:IPR000612"
+ /translation="MGFWRIVFTIILPPLGVFLGKGFGWAFILNILLTLLGYIPGLIH
+ AFWVQMRH"
+ misc_feature 162697..162852
+ /locus_tag="SARI_00177"
+ /note="Uncharacterized homolog of Blt101 [Function
+ unknown]; Region: COG0401"
+ /db_xref="CDD:223478"
+ gene 162955..163404
+ /locus_tag="SARI_00178"
+ CDS 162955..163404
+ /locus_tag="SARI_00178"
+ /inference="protein motif:HMMPfam:IPR002482"
+ /inference="protein motif:HMMPfam:IPR007055"
+ /inference="protein motif:HMMSmart:IPR002482"
+ /inference="protein motif:HMMSmart:IPR014004"
+ /inference="similar to AA sequence:REFSEQ:YP_217714.1"
+ /note="'COG: COG1652 Uncharacterized protein containing
+ LysM domain;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="LysM domain/BON superfamily protein"
+ /protein_id="YP_001569267.1"
+ /db_xref="GI:161502155"
+ /db_xref="InterPro:IPR002482"
+ /db_xref="InterPro:IPR007055"
+ /db_xref="InterPro:IPR014004"
+ /translation="MGLFNFVKDAGEKLWDAVTANHDKDEQAKKVQEHLNKTGIPDAD
+ KVNVQIADGKATVTGDGLSQEAKEKILVAVGNIAGISSVDDQVKTTTPAAESQFYTVK
+ SGDTLSAISKQVYGNANLYNKIFEANKPMLKSPEKIYPGQVLRIPEE"
+ misc_feature 162955..163398
+ /locus_tag="SARI_00178"
+ /note="LysM domain/BON superfamily protein; Provisional;
+ Region: PRK11198"
+ /db_xref="CDD:236880"
+ misc_feature 163039..163221
+ /locus_tag="SARI_00178"
+ /note="bacterial OsmY and nodulation domain; Region: BON;
+ smart00749"
+ /db_xref="CDD:197856"
+ misc_feature 163243..163392
+ /locus_tag="SARI_00178"
+ /note="Lysine Motif is a small domain involved in binding
+ peptidoglycan; Region: LysM; cd00118"
+ /db_xref="CDD:212030"
+ gene complement(163411..164142)
+ /locus_tag="SARI_00179"
+ CDS complement(163411..164142)
+ /locus_tag="SARI_00179"
+ /inference="protein motif:Gene3D:IPR000524"
+ /inference="protein motif:HMMPfam:IPR000524"
+ /inference="protein motif:HMMPfam:IPR011711"
+ /inference="protein motif:HMMSmart:IPR000524"
+ /inference="similar to AA sequence:INSD:AAX66632.1"
+ /note="regulator of gab gene expression"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional regulator CsiR"
+ /protein_id="YP_001569268.1"
+ /db_xref="GI:161502156"
+ /db_xref="InterPro:IPR000524"
+ /db_xref="InterPro:IPR011711"
+ /translation="MPGASRDASQEKKMTALSQPTAIDGYRWLKNDIIRGTYQPDEKL
+ RMSLLTSRYALGVGPLREALSQLVAERLVTVVNQKGYRVASMSEMELLDIFDARANME
+ AMLVRLAIERGDDAWEAEILARAHMLSKLEASDASEHMLDEWDQRHQAFHSAIVAGCG
+ SHYLLQMRERLFDLAARYRFIWLRETVLSVEMLEDKHIQHHTLTEAILAREAARASEL
+ MRQHLLTPIPIIRQAMTGKMKPGAA"
+ misc_feature complement(163432..164103)
+ /locus_tag="SARI_00179"
+ /note="DNA-binding transcriptional regulator CsiR;
+ Provisional; Region: PRK11534"
+ /db_xref="CDD:183181"
+ misc_feature complement(163891..164067)
+ /locus_tag="SARI_00179"
+ /note="Winged helix-turn-helix (WHTH) DNA-binding domain
+ of the GntR family of transcriptional regulators; Region:
+ WHTH_GntR; cd07377"
+ /db_xref="CDD:153418"
+ misc_feature complement(order(163900..163911,163915..163920,
+ 163948..163950,163957..163962,163966..163980,
+ 164002..164007,164008..164010))
+ /locus_tag="SARI_00179"
+ /note="DNA-binding site [nucleotide binding]; DNA binding
+ site"
+ /db_xref="CDD:153418"
+ misc_feature complement(163474..163866)
+ /locus_tag="SARI_00179"
+ /note="This entry represents the C-terminal ligand binding
+ domain of many members of the GntR family; Region: FCD;
+ smart00895"
+ /db_xref="CDD:214892"
+ gene complement(164147..165547)
+ /locus_tag="SARI_00180"
+ CDS complement(164147..165547)
+ /locus_tag="SARI_00180"
+ /inference="protein motif:HMMPanther:IPR002293"
+ /inference="protein motif:HMMPfam:IPR004841"
+ /inference="protein motif:HMMTigr:IPR011265"
+ /inference="protein motif:ScanRegExp:IPR004840"
+ /inference="similar to AA sequence:INSD:AAX66631.1"
+ /note="'KEGG: eci:UTI89_C0120 1.3e-69 aroP; aromatic amino
+ acid transport protein AroP K03293;
+ COG: COG1113 Gamma-aminobutyrate permease and related
+ permeases;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="gamma-aminobutyrate transporter"
+ /protein_id="YP_001569269.2"
+ /db_xref="GI:448236182"
+ /db_xref="InterPro:IPR002293"
+ /db_xref="InterPro:IPR004840"
+ /db_xref="InterPro:IPR004841"
+ /db_xref="InterPro:IPR011265"
+ /translation="MGQLSESHALGGGLKSRHVTMLSIAGVIGASLFVGSSVAIAEAG
+ PAVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGPWAGYTIGWLYWWFW
+ VLVIPLEANIAAIILNSWISGIPVWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKV
+ IAILAFIALGAAAISGFYPYAEVSGISRLWAHGGFMPNGFGAVLSAMLITMFSFMGAE
+ IVTIAAAESDTPDKHIVRATNSVIWRISIFYLCSIFVVVALIPWNMPGLKSAGSYRSV
+ LELLHIPHAKFIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDAPAVMGKTNRSKTP
+ WVAVLLSTGAAFLTVIVNYYAPAKVFKFLIDSSGAIALLVYLVIAVSQLRMRKILLAQ
+ GGEIKLKMWLYPWLTWLVIGFICFVLVVMLFRPAQQLEVISTGLLGLGIICTVPIMSR
+ WKKRIRWPKAPLQNLR"
+ misc_feature complement(164150..165487)
+ /locus_tag="SARI_00180"
+ /note="gamma-aminobutyrate transporter; Provisional;
+ Region: PRK10197"
+ /db_xref="CDD:182297"
+ gene complement(165677..166960)
+ /locus_tag="SARI_00181"
+ CDS complement(165677..166960)
+ /locus_tag="SARI_00181"
+ /inference="protein motif:HMMPanther:IPR005814"
+ /inference="protein motif:HMMPfam:IPR005814"
+ /inference="protein motif:HMMTigr:IPR004632"
+ /inference="protein motif:ScanRegExp:IPR005814"
+ /inference="similar to AA sequence:INSD:AAL21677.1"
+ /note="catalyzes the formation of succinate semialdehyde
+ and glutamate from 4-aminobutanoate and 2-oxoglutarate"
+ /codon_start=1
+ /transl_table=11
+ /product="4-aminobutyrate aminotransferase"
+ /protein_id="YP_001569270.1"
+ /db_xref="GI:161502158"
+ /db_xref="InterPro:IPR004632"
+ /db_xref="InterPro:IPR005814"
+ /translation="MNTNKALMQRRHNAVPRGVGQIHPIFAERAENCRVWDVEGREYL
+ DFAGGIAVLNTGHLHPGIVSAVEAQLKKLSHTCFQVLAYEPYLALCERMNQKVPGDFA
+ KKTLLVTTGSEAVENAVKIARAATKRSGAIAFSGAYHGRTHYTLSLTGKVNPYSAGMG
+ LMPGHVYRALYPCPLHGISDDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAAS
+ PAFMQRLRALCDQHGIMLIADEVQSGAGRTGTLFAMEQMGVAADITTFAKSIAGGFPL
+ AGVTGRAEVMDAIAPGGLGGTYAGNPIACAAALAVLDIFEHENLLQKANTLGKTLRDG
+ LMEIAETHREIGDVRGLGAMIAIELFENGDPSKPNATLTADIVARARDKGLILLSCGP
+ YYNILRILVPLTIDASQIRQGLEIIAQCFDEAKQA"
+ misc_feature complement(165686..166960)
+ /locus_tag="SARI_00181"
+ /note="4-aminobutyrate aminotransferase; Validated;
+ Region: PRK08088"
+ /db_xref="CDD:236149"
+ misc_feature complement(165698..166942)
+ /locus_tag="SARI_00181"
+ /note="Acetyl ornithine aminotransferase family. This
+ family belongs to pyridoxal phosphate (PLP)-dependent
+ aspartate aminotransferase superfamily (fold I). The major
+ groups in this CD correspond to ornithine
+ aminotransferase, acetylornithine aminotransferase;
+ Region: OAT_like; cd00610"
+ /db_xref="CDD:99735"
+ misc_feature complement(order(166157..166159,166235..166240,
+ 166244..166246,166349..166351,166538..166540,
+ 166544..166549,166625..166633))
+ /locus_tag="SARI_00181"
+ /note="inhibitor-cofactor binding pocket; inhibition site"
+ /db_xref="CDD:99735"
+ misc_feature complement(order(166157..166159,166235..166237,
+ 166244..166246,166349..166351,166544..166549,
+ 166625..166630))
+ /locus_tag="SARI_00181"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:99735"
+ misc_feature complement(166157..166159)
+ /locus_tag="SARI_00181"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:99735"
+ gene complement(166975..168423)
+ /gene="gabD"
+ /locus_tag="SARI_00182"
+ CDS complement(166975..168423)
+ /gene="gabD"
+ /locus_tag="SARI_00182"
+ /inference="protein motif:HMMPfam:IPR002086"
+ /inference="protein motif:HMMPIR:IPR012303"
+ /inference="protein motif:HMMTigr:IPR010102"
+ /inference="protein motif:ScanRegExp:IPR002086"
+ /inference="similar to AA sequence:REFSEQ:NP_461717.1"
+ /note="catalyzes the formation of succinate from succinate
+ semialdehyde; NADP dependent"
+ /codon_start=1
+ /transl_table=11
+ /product="succinate-semialdehyde dehydrogenase I"
+ /protein_id="YP_001569271.1"
+ /db_xref="GI:161502159"
+ /db_xref="InterPro:IPR002086"
+ /db_xref="InterPro:IPR010102"
+ /db_xref="InterPro:IPR012303"
+ /translation="MQLNDSTLFRQQAFIDGDWRDARGGDVITVSNPANGKPLGNVPK
+ MGAQETRDAIDAASRALPAWRALTAKERATILRRWFNLMMEHQDDLARLMTLEQGKPL
+ AEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLLVIKQPIGVTAAITPWNFPS
+ AMITRKAGPALAAGCTMVLKPASQTPFSALALAELAQRAGIPAGVFNVVTGSAGDIGG
+ EMTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEG
+ ALASKFRNAGQTCVCANRLYVQDSVYDRFAEKLQQAVEKLRIGDGLQSDVAIGPLIDE
+ KAVAKVQEHIADALEKGARIITGGEAHKLGGNFFQPTILADVPDNAKVAKEETFGPLA
+ PLFRFSDETEVIRQANDTEFGLAAYFYARDLSRVFRIGEALEYGIVGINTGIISNEVA
+ PFGGIKASGLGREGSKYGIEDYLEIKYMCIGL"
+ misc_feature complement(166978..168423)
+ /gene="gabD"
+ /locus_tag="SARI_00182"
+ /note="succinate-semialdehyde dehydrogenase I;
+ Provisional; Region: gabD; PRK11241"
+ /db_xref="CDD:183050"
+ misc_feature complement(166984..168336)
+ /gene="gabD"
+ /locus_tag="SARI_00182"
+ /note="Mitochondrial succinate-semialdehyde dehydrogenase
+ and ALDH family members 5A1 and 5F1-like; Region:
+ ALDH_F5_SSADH_GabD; cd07103"
+ /db_xref="CDD:143421"
+ misc_feature complement(order(166984..167004,167038..167040,
+ 167053..167055,167071..167076,167083..167085,
+ 167101..167121,167125..167127,167134..167136,
+ 167140..167142,167152..167157,167161..167163,
+ 167365..167367,167503..167505,167515..167517,
+ 167686..167688,167695..167697,167707..167709,
+ 167743..167745,167989..167991,168004..168012,
+ 168028..168054,168058..168063,168070..168072,
+ 168193..168195,168220..168222))
+ /gene="gabD"
+ /locus_tag="SARI_00182"
+ /note="tetramerization interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:143421"
+ misc_feature complement(order(167068..167070,167182..167184,
+ 167260..167262,167266..167268,167557..167559,
+ 167653..167661,167701..167706,167713..167715,
+ 167722..167733,167875..167880,167884..167886,
+ 167929..167931,167953..167967))
+ /gene="gabD"
+ /locus_tag="SARI_00182"
+ /note="NAD(P) binding site [chemical binding]; other site"
+ /db_xref="CDD:143421"
+ misc_feature complement(order(167557..167559,167566..167568,
+ 167659..167661,167953..167955))
+ /gene="gabD"
+ /locus_tag="SARI_00182"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:143421"
+ gene complement(168445..169713)
+ /locus_tag="SARI_00183"
+ CDS complement(168445..169713)
+ /locus_tag="SARI_00183"
+ /inference="protein motif:HMMPfam:IPR006076"
+ /inference="similar to AA sequence:REFSEQ:NP_457189.1"
+ /note="catalyzed the formation of 2-ketoglutarate from
+ 2-hydroxyglutarate"
+ /codon_start=1
+ /transl_table=11
+ /product="hydroxyglutarate oxidase"
+ /protein_id="YP_001569272.1"
+ /db_xref="GI:161502160"
+ /db_xref="InterPro:IPR006076"
+ /translation="MYDFVIIGGGIIGMSTAMQLIDVYPDARIALLEKESAPACHQTG
+ HNSGVIHAGVYYTPGSLKARFCLAGNQATKTFCDQNNICYDTCGKMLVATSELEMTRM
+ RALWERTAANGLEREWLSAAELREREPNIIGLGGIFVPSSGIVRYRDIATAMANRFQA
+ KGGEIIYHADVSALTEHAAGVIIRTSRGQEIETATLIGCAGLMADRLVKMLGVDPGFI
+ ICPFRGEYFRLAPEHNRIVNHLIYPIPDPAMPFLGVHLTRMIDGSVTVGPNAVLALKR
+ EGYRKRDISFADTLEILRSPGIRRVLQNHLLSGLNEMKNSLCKSGYLRRVQKYCPSLT
+ ANDLQPWPAGVRAQAVSPDGKLIDDFLFVATPRSIHTCNAPSPAATSAIPIGAHIVSK
+ VQALRESQINPGRTLRAARSVDVLHAAFTR"
+ misc_feature complement(168448..169713)
+ /locus_tag="SARI_00183"
+ /note="Predicted dehydrogenase [General function
+ prediction only]; Region: COG0579"
+ /db_xref="CDD:223652"
+ misc_feature complement(168535..169713)
+ /locus_tag="SARI_00183"
+ /note="hydroxyglutarate oxidase; Provisional; Region:
+ PRK11728"
+ /db_xref="CDD:183292"
+ gene complement(169739..170725)
+ /locus_tag="SARI_00184"
+ CDS complement(169739..170725)
+ /locus_tag="SARI_00184"
+ /inference="similar to AA sequence:INSD:AAL21674.1"
+ /note="in Escherichia coli this gene is induced by carbon
+ starvation and depends on sigma S and cAMP-CRP; the
+ structure of the Gab protein shows it is a member of
+ non-heme iron (II)-dependent oxygenase superfamily which
+ includes clavamini acid synthases; forms homotetramers in
+ solution"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569273.1"
+ /db_xref="GI:161502161"
+ /translation="MILMNALTAVKANTDDLAQRHAGFTLAPSAQSPRLLALTFTADT
+ TTQFLHQVAQWPVQALEYKSFLRFKIGKILDDLCGNQLQPLLIKTLLNRAEGALLINA
+ EGIDDVAQAEEMVKLATAVAHLIGRSNYDAMSGQYYARFVVKNVDNSDSYLRQPHRVM
+ ELHNDGTYVEEATDYVLMMKIDEQHMEGGNSLLLHLDDWEHLESFFTHPLARRVMRWA
+ APPSKNVSHDAWHPVFDVDQQGRPVMRYIDQFVQPKDFEEGVWLSELSDALETSKNIL
+ SVPVPVGKFLLINNLFWLHGRDRFTPHPDLRRELMRQRGYFAYAASHYQTHQ"
+ misc_feature complement(169775..170539)
+ /locus_tag="SARI_00184"
+ /note="Clavaminic acid synthetase (CAS) -like; CAS is a
+ trifunctional Fe(II)/ 2-oxoglutarate (2OG) oxygenase
+ carrying out three reactions in the biosynthesis of
+ clavulanic acid, an inhibitor of class A serine
+ beta-lactamases. In general, Fe(II)-2OG oxygenases...;
+ Region: CAS_like; cd00250"
+ /db_xref="CDD:238154"
+ misc_feature complement(order(169784..169786,169790..169792,
+ 170066..170068,170207..170209,170222..170224,
+ 170228..170230,170327..170329))
+ /locus_tag="SARI_00184"
+ /note="substrate binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:238154"
+ misc_feature complement(order(169802..169804,169841..169843,
+ 170153..170155,170231..170233,170237..170239))
+ /locus_tag="SARI_00184"
+ /note="active site"
+ /db_xref="CDD:238154"
+ misc_feature complement(order(169841..169843,170231..170233,
+ 170237..170239))
+ /locus_tag="SARI_00184"
+ /note="iron coordination sites [ion binding]; other site"
+ /db_xref="CDD:238154"
+ gene complement(170742..170888)
+ /locus_tag="SARI_00185"
+ CDS complement(170742..170888)
+ /locus_tag="SARI_00185"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569274.1"
+ /db_xref="GI:161502162"
+ /translation="MLNHTFHNVKNLLFLITTIKQNRLFHTRSWKMSIFLIYGYEMSI
+ AMSP"
+ gene complement(170881..171066)
+ /locus_tag="SARI_00186"
+ CDS complement(170881..171066)
+ /locus_tag="SARI_00186"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569275.1"
+ /db_xref="GI:161502163"
+ /translation="MTPVNLRLKNVALVRPTRSYARPDKPRQHHLPLLSLSHQPYYHH
+ NQLILKFFIKMTGYFFA"
+ gene complement(171053..172567)
+ /locus_tag="SARI_00187"
+ CDS complement(171053..172567)
+ /locus_tag="SARI_00187"
+ /inference="protein motif:HMMPfam:IPR002823"
+ /inference="similar to AA sequence:INSD:AAL21673.1"
+ /note="'KEGG: psp:PSPPH_3121 0.0014 nuoN; NADH-quinone
+ oxidoreductase, N subunit K00343;
+ COG: COG3333 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569276.1"
+ /db_xref="GI:161502164"
+ /db_xref="InterPro:IPR002823"
+ /translation="MDTWIYLSQGFAVAMTPENLVIALIGCFVGTIVGLLPGLGPING
+ VAILLPLAFALHLPAESALILLATVYIGCEYGGRISSILLNVPGDAAAIMTALDGYPM
+ AQQGKGGVALSISAVSSFFGSLIAIGGIILFAPALAQWSLAFGPAEYFALMVFAIACL
+ GSMMAQNPLKSFLAALIGLGLATVGVDANTGVYRFTFDSVHLSDGVQFIVVVIGLFSV
+ SEILLMLEHTSSGQTLVRKTGRMLFNLKEGAQCIGTTLRSSVIGFFVGVLPGAGATIA
+ SAITYMTEKKLSGNSDSFGKGDIRGVAAPEAANNASACGSFIPMLTLGVPGSGTTAVM
+ MGALTLYNITPGPAMFTEQPDIVWGLIAALLIANVMLLIMNIPLIGLFTRMLTIPLWF
+ LVPAIAAVSAVGVYAVHSTTFDLVLMVALGVLGYILRKMHFPMSPLILGFVLGEMLEQ
+ NLRRALSISNGNMAILWQSGVAKALLIMAIMVVVVPPVLRLIRKHSRKPQVDAG"
+ misc_feature complement(171149..172567)
+ /locus_tag="SARI_00187"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG3333"
+ /db_xref="CDD:225870"
+ gene complement(172578..173012)
+ /locus_tag="SARI_00188"
+ CDS complement(172578..173012)
+ /locus_tag="SARI_00188"
+ /inference="similar to AA sequence:INSD:AAL21672.1"
+ /note="'COG: NOG11450 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569277.1"
+ /db_xref="GI:161502165"
+ /translation="MMSDRIFAGIWLLLCIAGLFIAWQIQSEYSYEPVGPRPFPLGIL
+ GLMALCALALLLRHPDTVSWPRRLVLQKLVTMVIILLMYAWGFEWLGFPIATALLTMV
+ IGMLFGATTPAAGISGAVLGILLWYAFDRLLDVTLPLGAWLS"
+ misc_feature complement(172599..173009)
+ /locus_tag="SARI_00188"
+ /note="Tripartite tricarboxylate transporter TctB family;
+ Region: TctB; pfam07331"
+ /db_xref="CDD:219375"
+ gene complement(173024..174001)
+ /locus_tag="SARI_00189"
+ CDS complement(173024..174001)
+ /locus_tag="SARI_00189"
+ /inference="protein motif:HMMPfam:IPR005064"
+ /inference="similar to AA sequence:INSD:AAL21671.1"
+ /note="'COG: COG3181 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569278.1"
+ /db_xref="GI:161502166"
+ /db_xref="InterPro:IPR005064"
+ /translation="MKKQLLRTLTASILLLSTSVLAQQAPSRTECIAPAKPGGGFDLT
+ CKLIQVSLLETGAIEKPMRVTYMPGGVGAVAYNAIVAQRPGEPGTVVAFSGGSLLNLS
+ QGKFGRYGVDDVRWLASVGTDYGMIAVRADSPWKTLKDLMTAMENDPNSVVIGAGASI
+ GSQDWMKSALLAQKANVDPRKMRYVAFEGGGEPVTALMGNHVQVVSGDLSEMVPYLDG
+ DKIRVLAVFSENRLPGQLADVPTAKEQGYDLVWPIIRGFYVGPKVSDADYQWWVDTFK
+ KLQQTDEFKKQRDLRGLFAFDMTGQQLDDYVKKQVTDYREQAKAFGLAK"
+ misc_feature complement(173027..173938)
+ /locus_tag="SARI_00189"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG3181"
+ /db_xref="CDD:225722"
+ gene 174156..174830
+ /locus_tag="SARI_00190"
+ CDS 174156..174830
+ /locus_tag="SARI_00190"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:BlastProDom:IPR001867"
+ /inference="protein motif:HMMPfam:IPR001789"
+ /inference="protein motif:HMMPfam:IPR001867"
+ /inference="protein motif:HMMSmart:IPR001789"
+ /inference="protein motif:ScanRegExp:IPR005829"
+ /inference="protein motif:superfamily:IPR011006"
+ /inference="similar to AA sequence:INSD:AAL21670.1"
+ /note="'KEGG: rha:RHA1_ro05622 6.2e-36 response regulator
+ (protein-glutamate methylesterase) K07669;
+ COG: COG0745 Response regulators consisting of a CheY-like
+ receiver domain and a winged-helix DNA-binding domain;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569279.1"
+ /db_xref="GI:161502167"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR001867"
+ /db_xref="InterPro:IPR005829"
+ /db_xref="InterPro:IPR011006"
+ /translation="MRLLLAEDNRELAHWLEKALVQNGFAVDCVFDGLAADHLLHSET
+ YALAVLDINMPGIDGLEVVQRLRKRGLTLPVLLLTARSAVADRVKGLNVGADDYLPKP
+ FELEELDARLRALLRRSAGQVHEVQRLGELIFHDEGYFLLQEQPLALTPREQALLTVL
+ MYRRTRPVSRQQLFEQVFSLNDEVSPESIELYIHRLRKKLQGSDVRITTLRGLGYVLE
+ RGDEVG"
+ misc_feature 174156..174818
+ /locus_tag="SARI_00190"
+ /note="transcriptional regulatory protein TctD;
+ Provisional; Region: PRK15479"
+ /db_xref="CDD:185376"
+ misc_feature 174165..174464
+ /locus_tag="SARI_00190"
+ /note="Signal receiver domain; originally thought to be
+ unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
+ recently identified in eukaroytes ETR1 Arabidopsis
+ thaliana; this domain receives the signal from the sensor
+ partner in a two-component systems; Region: REC; cd00156"
+ /db_xref="CDD:238088"
+ misc_feature order(174174..174179,174306..174308,174330..174332,
+ 174390..174392,174447..174449,174456..174461)
+ /locus_tag="SARI_00190"
+ /note="active site"
+ /db_xref="CDD:238088"
+ misc_feature 174306..174308
+ /locus_tag="SARI_00190"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238088"
+ misc_feature order(174315..174320,174324..174332)
+ /locus_tag="SARI_00190"
+ /note="intermolecular recognition site; other site"
+ /db_xref="CDD:238088"
+ misc_feature 174456..174464
+ /locus_tag="SARI_00190"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238088"
+ misc_feature 174537..174806
+ /locus_tag="SARI_00190"
+ /note="Effector domain of response regulator. Bacteria and
+ certain eukaryotes like protozoa and higher plants use
+ two-component signal transduction systems to detect and
+ respond to changes in the environment. The system consists
+ of a sensor histidine kinase and...; Region: trans_reg_C;
+ cd00383"
+ /db_xref="CDD:238225"
+ misc_feature order(174603..174605,174660..174665,174717..174719,
+ 174726..174728,174750..174755,174780..174782,
+ 174795..174797)
+ /locus_tag="SARI_00190"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:238225"
+ gene 174817..176232
+ /locus_tag="SARI_00191"
+ CDS 174817..176232
+ /locus_tag="SARI_00191"
+ /inference="protein motif:Gene3D:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003660"
+ /inference="protein motif:HMMPfam:IPR003661"
+ /inference="protein motif:HMMPfam:IPR013727"
+ /inference="protein motif:HMMSmart:IPR003594"
+ /inference="protein motif:HMMSmart:IPR003660"
+ /inference="protein motif:HMMSmart:IPR003661"
+ /inference="protein motif:superfamily:IPR003594"
+ /inference="protein motif:superfamily:IPR009082"
+ /inference="similar to AA sequence:INSD:AAL21669.1"
+ /note="'KEGG: stm:STM2784 1.7e-241 tctE; tricarboxylic
+ transport: regulatory protein K07649;
+ COG: COG0642 Signal transduction histidine kinase;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569280.1"
+ /db_xref="GI:161502168"
+ /db_xref="InterPro:IPR003594"
+ /db_xref="InterPro:IPR003660"
+ /db_xref="InterPro:IPR003661"
+ /db_xref="InterPro:IPR009082"
+ /db_xref="InterPro:IPR013727"
+ /translation="MKWVKPQSLYLQLLLFLGLPLILLWGLSTFNSYVNALQAATQAY
+ DRTLLSSARTVSERLVVRNSHLEVNVPWVVLDSFELNMNDRLYYKVVAPSGKVISGYA
+ DLPAMPPATPRTRLYPALAWFYHTEYRGEAIRVARLLQPVNEGGIIGMAEIYVAETLQ
+ SRRYLAGQLLFSSWISQGLLVLLTLVLVGWLLRRILRPMRQLSSLMVRREPGLLTPLP
+ ELLPWSETRLLIVAFNRYIDRLRGILSRQERFSADASHQLKTPLAVLKTQAAVALASQ
+ QPRHWYESLEAMSVTLDSTIQLTERLLQLSAVKHKEQGERRFSPVNLYDVVQNGCFTR
+ LAQARSKHTDLGYEGEQEAVWIDGDEVLLGELCGNLLDNALKYTPEQGIVTVRLERDG
+ DVITLVVEDSGPGIDDEHIHLALQPFHRLDNVGNVAGAGIGLALVNDIARLHRTHPHF
+ SRSETLGGLYVRIRFLSIVPQ"
+ misc_feature 174898..175326
+ /locus_tag="SARI_00191"
+ /note="Two-component sensor kinase N-terminal; Region:
+ 2CSK_N; pfam08521"
+ /db_xref="CDD:219880"
+ misc_feature 175393..176211
+ /locus_tag="SARI_00191"
+ /note="Signal transduction histidine kinase [Signal
+ transduction mechanisms]; Region: BaeS; COG0642"
+ /db_xref="CDD:223715"
+ misc_feature 175393..175551
+ /locus_tag="SARI_00191"
+ /note="Histidine kinase, Adenylyl cyclase,
+ Methyl-accepting protein, and Phosphatase (HAMP) domain.
+ HAMP is a signaling domain which occurs in a wide variety
+ of signaling proteins, many of which are bacterial. The
+ HAMP domain consists of two alpha helices...; Region:
+ HAMP; cl01054"
+ /db_xref="CDD:242275"
+ misc_feature 175546..175734
+ /locus_tag="SARI_00191"
+ /note="Histidine Kinase A (dimerization/phosphoacceptor)
+ domain; Histidine Kinase A dimers are formed through
+ parallel association of 2 domains creating 4-helix
+ bundles; usually these domains contain a conserved His
+ residue and are activated via...; Region: HisKA; cd00082"
+ /db_xref="CDD:119399"
+ misc_feature order(175564..175566,175576..175578,175588..175590,
+ 175597..175599,175609..175611,175618..175620,
+ 175666..175668,175678..175680,175687..175689,
+ 175699..175701,175708..175710,175720..175722)
+ /locus_tag="SARI_00191"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119399"
+ misc_feature 175582..175584
+ /locus_tag="SARI_00191"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:119399"
+ misc_feature 175921..176211
+ /locus_tag="SARI_00191"
+ /note="Histidine kinase-like ATPases; This family includes
+ several ATP-binding proteins for example: histidine
+ kinase, DNA gyrase B, topoisomerases, heat shock protein
+ HSP90, phytochrome-like ATPases and DNA mismatch repair
+ proteins; Region: HATPase_c; cd00075"
+ /db_xref="CDD:238030"
+ misc_feature order(175921..175923,175933..175935,175942..175944,
+ 176011..176013,176017..176019,176023..176025,
+ 176029..176034,176107..176118,176164..176166,
+ 176173..176175,176188..176193,176197..176199)
+ /locus_tag="SARI_00191"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature 175933..175935
+ /locus_tag="SARI_00191"
+ /note="Mg2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature order(176023..176025,176029..176031,176107..176109,
+ 176113..176115)
+ /locus_tag="SARI_00191"
+ /note="G-X-G motif; other site"
+ /db_xref="CDD:238030"
+ gene 176365..177378
+ /locus_tag="SARI_00192"
+ CDS 176365..177378
+ /locus_tag="SARI_00192"
+ /inference="protein motif:HMMPfam:IPR011541"
+ /inference="protein motif:HMMTigr:IPR004688"
+ /inference="similar to AA sequence:INSD:AAL21668.1"
+ /note="'COG: COG3376 High-affinity nickel permease;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569281.1"
+ /db_xref="GI:161502169"
+ /db_xref="InterPro:IPR004688"
+ /db_xref="InterPro:IPR011541"
+ /translation="MNNHTKRRGIALTAFLVSVNILAWIWAFFVFHHHAVMLSAALLA
+ YSFGLRHAVDADHIAAIDTVTRKLMQQGKTSLGVGAFFSLGHSTIVVVACLAIVVTSM
+ AFRDRIDILHQYGSLIGTAVSAFFLLAMALLNLFILFSVWRQFRSVTRGEPARAHDET
+ LPGGLMTRIFQRTFRLVTSSWHMYFVGFLFGLGFDTATEVGLLGISASAANQGLSLWS
+ MMIFPVLFTAGMALVDSLDNFVMVGAYGWAFSHPLRKLYYNMTITAASVFVALAIGGL
+ EALGLIDDALQLSGTFWQTVSTLNDHMGNVGFWVVAAFVLFWLLSLLNYRWRGYDKIT
+ LKT"
+ misc_feature 176365..177360
+ /locus_tag="SARI_00192"
+ /note="High-affinity nickel permease [Inorganic ion
+ transport and metabolism]; Region: HoxN; COG3376"
+ /db_xref="CDD:225911"
+ gene complement(178098..178994)
+ /locus_tag="SARI_00193"
+ CDS complement(178098..178994)
+ /locus_tag="SARI_00193"
+ /inference="protein motif:HMMPfam:IPR009977"
+ /inference="similar to AA sequence:INSD:AAO70247.1"
+ /note="'COG: NOG11449 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569282.1"
+ /db_xref="GI:161502170"
+ /db_xref="InterPro:IPR009977"
+ /translation="MKIQEVKRILTRWELSSFSLYREAFTQYGGSINMHPDIVDYFMR
+ RHNWHFKFFHYKEDNAIKGAYFICNDQNIGILTRRTFPLSSDEILIPMAPELRCFLPD
+ RTNRLSVLHQPQILNAIWKITRKKQNCLVKETFSSKFEKRRRNEYQKFLRNGGSVRTV
+ DELSTEELAHTFITLFQSRFGDTLSGYPIENLIDFFTQLRHLLFGNILYIEGTPCAFD
+ IVLKSESRLNIYFDVPNSGVKSEYMKLSPGSILMWLNINRARHYCQERQKRLIFSLGI
+ LKPEWEYKRLWSTPYFTGKSIC"
+ misc_feature complement(178101..178994)
+ /locus_tag="SARI_00193"
+ /note="antimicrobial resistance protein Mig-14;
+ Provisional; Region: PRK15312"
+ /db_xref="CDD:185212"
+ misc_feature complement(178140..178586)
+ /locus_tag="SARI_00193"
+ /note="Acetyltransferase (GNAT) domain; Region:
+ Acetyltransf_6; pfam13480"
+ /db_xref="CDD:222164"
+ gene complement(179299..180234)
+ /locus_tag="SARI_00194"
+ CDS complement(179299..180234)
+ /locus_tag="SARI_00194"
+ /inference="protein motif:HMMPfam:IPR007488"
+ /inference="similar to AA sequence:REFSEQ:YP_217699.1"
+ /note="'COG: COG2990 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569283.1"
+ /db_xref="GI:161502171"
+ /db_xref="InterPro:IPR007488"
+ /translation="MTMHQSDMDMERYNPLLMLKEVMAQTPYRHKRWGERKFRYKFVL
+ RCLINPVTTIKYFNELCNLNQPRTLITHRPLLPAKIQRPYLYTGLSIRCRARAILEHY
+ QFVQSFAENKIKKILLSEEPTLLAHLEGKNGALVDIYCGPCGYDREGELTLTLCFNDT
+ PLARLSFSFIHHEGKQIALVAGLQGPSKHVGPQVIRNATKDCYGLFPKRMLYEAFATF
+ IQACNVAEIFAVSENNHVYRQLRYLFQKKKTFVASYSEFWESLNGVKEGALYHLPSQV
+ MRKSPESIPSKKRAEYRNRYHILDKIVQQVKSLSH"
+ misc_feature complement(179311..180216)
+ /locus_tag="SARI_00194"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: VirK; COG2990"
+ /db_xref="CDD:225537"
+ gene 180310..180492
+ /locus_tag="SARI_00195"
+ CDS 180310..180492
+ /locus_tag="SARI_00195"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569284.1"
+ /db_xref="GI:161502172"
+ /translation="MPAETMLLNGLSMAAIKRIKHPFYRFSGKGGSHELSIKTNITFI
+ ILSNVISRYIYFVGIM"
+ gene 180671..181726
+ /locus_tag="SARI_00196"
+ CDS 180671..181726
+ /locus_tag="SARI_00196"
+ /inference="protein motif:HMMPfam:IPR001646"
+ /inference="similar to AA sequence:REFSEQ:YP_217697.1"
+ /note="'KEGG: ana:alr3268 4.1e-09 serine/threonine kinase
+ K08884;
+ COG: COG1357 Uncharacterized low-complexity proteins;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569285.1"
+ /db_xref="GI:161502173"
+ /db_xref="InterPro:IPR001646"
+ /translation="MERSPDSLAGMAASAFGTGTYAAMRQATSLQSFLEFIINFFTCG
+ GVQRRNKRQYQELIEAMAETLRNSMCDRRNAPLPENIILDSVGGFCVEFNLPGANNDT
+ GNVIVRVCKDGNTETREVPMETFEKVCRVLLFRCEYSLPQDSIILTAQGGMYLKDALL
+ TGANLTAENLCGADLSGANLEGAVLFMADCEGANFKGANLSGASLGDSNFKNACLEDS
+ IMCGATLDHANLTGANLQHASLLGCSMIDSNLCGANMERANVSGAILTGANMCDTILK
+ GTNMMATNMEGAILTRANLQKANLTSANLEGADLSQADLKNTNIKDCTLTHSRTEETR
+ MSASTQMLFNEFYSDDF"
+ misc_feature 180671..181723
+ /locus_tag="SARI_00196"
+ /note="secreted effector protein PipB2; Provisional;
+ Region: PRK15196"
+ /db_xref="CDD:185118"
+ misc_feature 181124..181225
+ /locus_tag="SARI_00196"
+ /note="Pentapeptide repeats (8 copies); Region:
+ Pentapeptide; pfam00805"
+ /db_xref="CDD:109845"
+ misc_feature 181187..181306
+ /locus_tag="SARI_00196"
+ /note="Pentapeptide repeats (8 copies); Region:
+ Pentapeptide; pfam00805"
+ /db_xref="CDD:109845"
+ misc_feature 181352..181480
+ /locus_tag="SARI_00196"
+ /note="Pentapeptide repeats (8 copies); Region:
+ Pentapeptide; pfam00805"
+ /db_xref="CDD:109845"
+ misc_feature 181502..181621
+ /locus_tag="SARI_00196"
+ /note="Pentapeptide repeats (8 copies); Region:
+ Pentapeptide; pfam00805"
+ /db_xref="CDD:109845"
+ gene complement(181698..181946)
+ /locus_tag="SARI_00197"
+ CDS complement(181698..181946)
+ /locus_tag="SARI_00197"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569286.1"
+ /db_xref="GI:161502174"
+ /translation="MKVLLKKIESHSDIWIVVYSCNNKRYCKLFTLSHYFSKESGLLL
+ IPLAHVFSDNTLFRYLFLRFLYVSLTLNRTKNHHYKIR"
+ gene 182301..182456
+ /locus_tag="SARI_00198"
+ CDS 182301..182456
+ /locus_tag="SARI_00198"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569287.1"
+ /db_xref="GI:161502175"
+ /translation="MQYKGMLRNSRAIIIAAGPDIDRQFSVCKAPDEYHQAFCISAPG
+ HSWSYIE"
+ gene complement(182341..182478)
+ /locus_tag="SARI_00199"
+ CDS complement(182341..182478)
+ /locus_tag="SARI_00199"
+ /note="'COG: COG2801 Transposase and inactivated
+ derivatives;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569288.1"
+ /db_xref="GI:161502176"
+ /translation="MISDAIVVIRYMTMNGLELKYKTPDDIHQALYRQKTVCLYQDQP
+ R"
+ gene 182900..185086
+ /locus_tag="SARI_00200"
+ CDS 182900..185086
+ /locus_tag="SARI_00200"
+ /inference="protein motif:HMMPfam:IPR000531"
+ /inference="protein motif:HMMPfam:IPR012910"
+ /inference="protein motif:HMMTigr:IPR010105"
+ /inference="protein motif:ScanRegExp:IPR000568"
+ /note="Fep; Cbt; Cbr; FeuB; FepA; PfeA; IroN; BfeA; outer
+ membrane receptor of ferric enterobactin and colicins B
+ and D; interacts with the TonB-ExbBD complex which
+ catalyzes the translocation of the siderophore to the
+ periplasmic space"
+ /codon_start=1
+ /transl_table=11
+ /product="outer membrane receptor FepA"
+ /protein_id="YP_001569289.1"
+ /db_xref="GI:161502177"
+ /db_xref="InterPro:IPR000531"
+ /db_xref="InterPro:IPR000568"
+ /db_xref="InterPro:IPR010105"
+ /db_xref="InterPro:IPR012910"
+ /translation="MGMRVNKILWLITVVFSGVNSPLSAAEYSEGNGETMVVESTAEQ
+ VLKQQPGVSIITRDDIQKNPPVNDLSDIIRKMPGVNLTGNSASGTRGNNRQIDIRGMG
+ PENTLVLIDGVPVTSRNSVRYSWRGERDTRGDTNWVPPELVERIEVIRGPAAARYGSG
+ AAGGVVNIITKRPTNDWHGSLSLYTNQPENSKEGDTRRGNFSLSGPLAGDALTMRLYG
+ NLNRTDADSWDINSSAGTKNAAGREGVTNKDINSVFSWKMTSQQILDFEAGYSRQGNI
+ YAGDTQNSTSNAVTKSLAQSGRETNRLYRQNYGITHHGIWDWGQSRLGFYYEKTNNTR
+ MNEGLSGGGEGRITNDQTFTTNRLTSYRTSGEVNVPVIWLFEQTLTVGAEWNRDALED
+ PSSTGLTVNDNNIAGISGSAAHRSSKNKSQISALYVEDNIEPMAGTNIIPGLRFDYLS
+ ESGSNFSPSLNLSQELGEYVKMKAGIARAFKAPNLYQTSEGYLLYSKGNGCPKDLPSG
+ RAGCYLVGNKNLDPEISINKEIGLEFTVEDYHASVTYFRNDYQNKIVAGDKIIGKSSS
+ GAYVLQWQNGGKALVEGIEASMVVPLMPDRLNWNTNATYMITSEQKDTGNPLSIIPKY
+ TVNTSLDWTITSALSAGVNWTLYGKQKPRTHAESRSEETKGLSGKALGAYSLVGTNVN
+ YDINKNLRLNVGISNIFDKQIYRSAEGANTYNEPGRAYYAGVTASF"
+ misc_feature 182900..185083
+ /locus_tag="SARI_00200"
+ /note="outer membrane receptor FepA; Provisional; Region:
+ PRK13528"
+ /db_xref="CDD:237413"
+ misc_feature 183050..185083
+ /locus_tag="SARI_00200"
+ /note="TonB dependent/Ligand-Gated channels are created by
+ a monomeric 22 strand (22,24) anti-parallel beta-barrel.
+ Ligands apparently bind to the large extracellular loops.
+ The N-terminal 150-200 residues form a plug from the
+ periplasmic end of barrel; Region: ligand_gated_channel;
+ cd01347"
+ /db_xref="CDD:238657"
+ misc_feature order(183050..183079,183110..183139,183185..183202,
+ 183221..183244,183317..183349,183383..183409)
+ /locus_tag="SARI_00200"
+ /note="N-terminal plug; other site"
+ /db_xref="CDD:238657"
+ misc_feature order(183893..183895,183965..183967)
+ /locus_tag="SARI_00200"
+ /note="ligand-binding site [chemical binding]; other site"
+ /db_xref="CDD:238657"
+ gene complement(185128..186075)
+ /locus_tag="SARI_00201"
+ CDS complement(185128..186075)
+ /locus_tag="SARI_00201"
+ /inference="protein motif:HMMPfam:IPR000801"
+ /inference="similar to AA sequence:REFSEQ:YP_217694.1"
+ /note="'KEGG: btk:BT9727_3479 6.3e-20 possible esterase;
+ COG: COG2819 Predicted hydrolase of the alpha/beta
+ superfamily;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569290.1"
+ /db_xref="GI:161502178"
+ /db_xref="InterPro:IPR000801"
+ /translation="MYGREYRHKRYRITLFLASFCFPLVYSKLSYTKPDMQPLGPNIA
+ DKGSEYYNFRVNDFQSADSARHYRVWTAIPYKPAPPLGYPVLYMLDGNAVMDRLSEAL
+ LKQLADHSPPVIVAIGYQTNLPFDLNGRAYDYTPVLGTGSEDNENNPRFHRKTGGGPA
+ FRQLLETHIAPQVEQGIAINPERRGVWGHSYGGLFVLDSWLSSSFFYMYYSASPSLNR
+ DNFALLKRIMAVTPPPFCHKKLIIMEGSASSGDSRQSQMAGLLQKVQKTVITLENNGV
+ NAALQDYPGQGHGPMFNVSFRNALLDISREQAGQKSRCN"
+ misc_feature complement(185158..185943)
+ /locus_tag="SARI_00201"
+ /note="Predicted hydrolase of the alpha/beta superfamily
+ [General function prediction only]; Region: COG2819"
+ /db_xref="CDD:225375"
+ gene complement(186109..187353)
+ /locus_tag="SARI_00203"
+ CDS complement(186109..187353)
+ /locus_tag="SARI_00203"
+ /inference="protein motif:HMMPfam:IPR000801"
+ /inference="similar to AA sequence:INSD:AAK33131.1"
+ /note="'KEGG: btk:BT9727_2470 2.0e-07 probable esterase
+ K07214;
+ COG: COG2382 Enterochelin esterase and related enzymes;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569291.1"
+ /db_xref="GI:161502180"
+ /db_xref="InterPro:IPR000801"
+ /translation="MRLSPPGDPVAMQTAARLRRQLAAGSQVDVFHFWQEANSLALPL
+ VTAIDGTDDEREVTFLWRAAYPLQGVYVRLNRVTDKDNVTKGMMTQLPTTDIWHLTLR
+ LPASYYGSYTMTEIPQETPDETVLQLGSRFATLVGQADPLNRTPGINVRGNAQESILA
+ LDNAPAQEEWSGRRAYAGQLFTAEHRLAGQPRCVRLYLPEVPVIQPLGLLVLTDGETW
+ FDHLGVSAAIDAAINSGRIAPVAVLGIDNVDEHERVAILGGRRELVLDIAERLLPTIR
+ AEHPERRWADRRQTVLAGQSLGGVTALMAARHVPESFGLVLSHSPSMWWTPDNRSRPD
+ HFSGEDRSWISEHVLSAPSPAVRTHLCVGSLEGSTVPQVKQLHEKLRASGVESHCDVY
+ TGGHDYAWWRGALIDGLSLLPR"
+ misc_feature complement(186841..187188)
+ /locus_tag="SARI_00203"
+ /note="Domain of unknown function (DUF3327); Region:
+ DUF3327; pfam11806"
+ /db_xref="CDD:221235"
+ misc_feature complement(186112..186999)
+ /locus_tag="SARI_00203"
+ /note="Enterochelin esterase and related enzymes
+ [Inorganic ion transport and metabolism]; Region: Fes;
+ COG2382"
+ /db_xref="CDD:225256"
+ gene 187249..187458
+ /locus_tag="SARI_00202"
+ CDS 187249..187458
+ /locus_tag="SARI_00202"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569292.1"
+ /db_xref="GI:161502179"
+ /translation="MPEVENVNLASGGELAAKARGSLHRDGISGWAQSHYRYSISLIF
+ WSVSIAKRLLQEQPLAGFLLRKSCR"
+ gene complement(187462..191094)
+ /locus_tag="SARI_00204"
+ CDS complement(187462..191094)
+ /locus_tag="SARI_00204"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR001140"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /note="'KEGG: fal:FRAAL1741 1.9e-201 putative ABC
+ transporter ATP-binding protein;
+ COG: COG1132 ABC-type multidrug transport system, ATPase
+ and permease components;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569293.1"
+ /db_xref="GI:161502181"
+ /db_xref="InterPro:IPR001140"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MPARAWIVRLARVCWERKTLSTIVIVASVSTILLAALTPLITRQ
+ AVNDAIAGDATRLPLLTCGLLLIALFDFIGNYVRRGYAGELSLWVQHTLRSRAFDSIQ
+ KLDGAAQDALRTGQVISRTNSDLQQVHTLLQMCPVPLAVLTYYIAGIAVMLWMSPSMT
+ LIVVGVLAALAITALHARRRVFAQTGLASDRLAQITEHMREVLEQILVVKSCVAELRE
+ TRWLDSQSRQMVRVRIGAAISQAMPGATMLALPVLGQIILLCYGGWSVMNGHIDLGTF
+ VAFASFLAMLTGPTRVLASFLVIAQRTQASVERVFALIDTRSLMEDGTESVGGQIIGL
+ DVEKMSFHYGNDNRILNETSFSIHAGETVAVVGASGSGKSTLLMLLARFYDPTSGGVW
+ LNTTRGQQNIRDLKLTALRRHVGVVFEDAFLFAGTVAENIAYGHPQATQDDIRRAADA
+ AGASGFINALPQGFNTRLTERGANLSGGQRQRIALARALITAPELLILDDTTSAVDAG
+ TEAEINTALGRYADSEHMLLVIARRRSTLQLADRIVVLDKGRVVDIGTQAELDARCPT
+ FRSLMRGDGDFLALSPTEQHELWPTTQSAKSDDAHQCQTPAGKGFVDRMTRVPERAVQ
+ MALAGHGRQVSSLLTPVAWMFVIAALLIALDSAAGVGVLVLLQRGIDSGVAVGNMSTI
+ GISALLALCLVAISWCCYALQTIFAARAAESVQHTVRLRSFGHLLRLSLPWHEKNIDS
+ RLTRMTVDVDSLARFLQNGLASAATSIVTMVAIAAAMFWLDPILALTALSAVPVVMLA
+ TWIYRRLSSPAYAQARLEIGKVNSTLQEKVSGLRVVQSHGQQEQEAARLRALSNNFRT
+ TRVRAQKYLAVYFPFLTFCTEAAYAAVLLIGASQVAGGEMTPGVLAAFFLLQGQFYGP
+ VQQLSGIVDSWQQATASGKHINALLATEETENIAPSSITPSTGALRLEALTFRYPEET
+ QPALDNISLTIPQGTIVAVVGRSGAGKSTLIKLLAGLYSPTSGRIRIGERVIDTASLT
+ DYRRQTGLVSQDVALFSGDIAENIRYSRPASSNTEVEIAARRAGLLETVQHLPQGFRT
+ PVNNGGSDLSAGQRQLIALARAQLAQAHILLLDEATARIDRSAEERLMTSLTRVTHTE
+ KRIALIVAHRLTTARRCDVIVVIDKGCIAEYGSHEQLIATHGLYARLWRDSVCQTRDT
+ QEEVMG"
+ misc_feature complement(190228..>190830)
+ /locus_tag="SARI_00204"
+ /note="ABC transporter transmembrane region; Region:
+ ABC_membrane; pfam00664"
+ /db_xref="CDD:216049"
+ misc_feature complement(189406..190095)
+ /locus_tag="SARI_00204"
+ /note="ATP-binding cassette transporter nucleotide-binding
+ domain; Region: ABC_ATPase; cl17201"
+ /db_xref="CDD:247755"
+ misc_feature complement(189415..190089)
+ /locus_tag="SARI_00204"
+ /note="ABC-type cobalt transport system, ATPase component
+ [Inorganic ion transport and metabolism]; Region: CbiO;
+ COG1122"
+ /db_xref="CDD:224047"
+ misc_feature complement(189973..189996)
+ /locus_tag="SARI_00204"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(order(189499..189501,189595..189600,
+ 189838..189840,189970..189978,189982..189987))
+ /locus_tag="SARI_00204"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(189838..189849)
+ /locus_tag="SARI_00204"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(189643..189672)
+ /locus_tag="SARI_00204"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(189595..189612)
+ /locus_tag="SARI_00204"
+ /note="Walker B; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(189577..189588)
+ /locus_tag="SARI_00204"
+ /note="D-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(189493..189513)
+ /locus_tag="SARI_00204"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(187510..189168)
+ /locus_tag="SARI_00204"
+ /note="ABC-type multidrug transport system, ATPase and
+ permease components [Defense mechanisms]; Region: MdlB;
+ COG1132"
+ /db_xref="CDD:224055"
+ misc_feature complement(188350..189093)
+ /locus_tag="SARI_00204"
+ /note="ABC transporter transmembrane region; Region:
+ ABC_membrane; pfam00664"
+ /db_xref="CDD:216049"
+ misc_feature complement(187513..188220)
+ /locus_tag="SARI_00204"
+ /note="ATP-binding cassette transporter nucleotide-binding
+ domain; Region: ABC_ATPase; cl17201"
+ /db_xref="CDD:247755"
+ misc_feature complement(188095..188118)
+ /locus_tag="SARI_00204"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(order(187630..187632,187729..187734,
+ 187972..187974,188092..188100,188104..188109))
+ /locus_tag="SARI_00204"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(187972..187983)
+ /locus_tag="SARI_00204"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(187777..187806)
+ /locus_tag="SARI_00204"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(187729..187746)
+ /locus_tag="SARI_00204"
+ /note="Walker B; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(187711..187722)
+ /locus_tag="SARI_00204"
+ /note="D-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(187624..187644)
+ /locus_tag="SARI_00204"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213179"
+ gene complement(191190..192296)
+ /locus_tag="SARI_00205"
+ CDS complement(191190..192296)
+ /locus_tag="SARI_00205"
+ /inference="protein motif:HMMPanther:IPR002213"
+ /inference="protein motif:HMMPfam:IPR010610"
+ /inference="similar to AA sequence:INSD:AAK33129.1"
+ /note="'KEGG: eci:UTI89_C1122 2.5e-174 iroB; putative
+ glucosyltransferase K00754;
+ COG: COG1819 Glycosyl transferases, related to
+ UDP-glucuronosyltransferase;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569294.1"
+ /db_xref="GI:161502182"
+ /db_xref="InterPro:IPR002213"
+ /db_xref="InterPro:IPR010610"
+ /translation="MRILFVGPPLYGLLYPVLSLAQAFRVNGHEVLIASGGKFAQKAA
+ EAGLVVFDAAPGFDSEAGYRRQEALRKENNIGTKMGNFSFFSEEMTDPLVAFAGQWRP
+ DLIVYPPLGVVGPLIAAKYGIPVVMQTVGFGHTPWHIKGVTKSLSNAYRRHGVSAPPR
+ DLAWIDVTPPSMSILQNDGEPVISMQYVPYNGGAVWEEWWERTPDRKRLLVSLGTVKP
+ MVDGLDLISWVMDSAGEVDAEIILHLPANARSDLRSLPPNVRLVDWLPMGVFLNGADG
+ FIHHGGAGNTLTALHAGIPQIVFGQGADRPVNARAVVERGCGIIPGKSGLTSSMINTF
+ LGNSALREASLEVAAEMAAQPCPTEVAKKLIAML"
+ misc_feature complement(191193..192296)
+ /locus_tag="SARI_00205"
+ /note="Glycosyl transferases, related to
+ UDP-glucuronosyltransferase [Carbohydrate transport and
+ metabolism / Signal transduction mechanisms]; Region:
+ COG1819"
+ /db_xref="CDD:224732"
+ misc_feature complement(191205..192296)
+ /locus_tag="SARI_00205"
+ /note="This family includes the Gtfs, a group of
+ homologous glycosyltransferases involved in the final
+ stages of the biosynthesis of antibiotics vancomycin and
+ related chloroeremomycin. Gtfs transfer sugar moieties
+ from an activated NDP-sugar donor to the...; Region:
+ GT1_Gtf_like; cd03784"
+ /db_xref="CDD:99960"
+ misc_feature complement(order(191211..191213,191220..191225,
+ 191988..191990,192216..192218,192294..192296))
+ /locus_tag="SARI_00205"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99960"
+ misc_feature complement(order(191433..191435,191442..191447,
+ 191451..191453,191457..191459,191652..191654,
+ 192252..192254,192258..192263))
+ /locus_tag="SARI_00205"
+ /note="active site"
+ /db_xref="CDD:99960"
+ misc_feature complement(order(191442..191447,191451..191453,
+ 191457..191459,191652..191654,192261..192263))
+ /locus_tag="SARI_00205"
+ /note="TDP-binding site; other site"
+ /db_xref="CDD:99960"
+ misc_feature complement(192258..192260)
+ /locus_tag="SARI_00205"
+ /note="acceptor substrate-binding pocket; other site"
+ /db_xref="CDD:99960"
+ gene complement(192790..192954)
+ /locus_tag="SARI_00206"
+ CDS complement(192790..192954)
+ /locus_tag="SARI_00206"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569295.1"
+ /db_xref="GI:161502183"
+ /translation="MMPVTRYFCIFIKLGFQETINLVADTLQKSQNSDNIPDKALFVR
+ NIRIMMSKRV"
+ gene 192982..193251
+ /locus_tag="SARI_00207"
+ CDS 192982..193251
+ /locus_tag="SARI_00207"
+ /inference="protein motif:HMMPfam:IPR006119"
+ /inference="similar to AA sequence:REFSEQ:YP_407274.1"
+ /note="'COG: COG1961 Site-specific recombinases, DNA
+ invertase Pin homologs;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569296.1"
+ /db_xref="GI:161502184"
+ /db_xref="InterPro:IPR006119"
+ /translation="MLIGYVSVSTNDQNTDLQRNTLNCAECELIFEDKISGTKPDRLG
+ LKKLFRTLSAGDTLVVWTLENWGAACGILSYWLKNCVSVVLIFAA"
+ misc_feature 192982..>193182
+ /locus_tag="SARI_00207"
+ /note="Site-specific recombinases, DNA invertase Pin
+ homologs [DNA replication, recombination, and repair];
+ Region: PinR; COG1961"
+ /db_xref="CDD:224872"
+ misc_feature 192985..>193170
+ /locus_tag="SARI_00207"
+ /note="Serine Recombinase (SR) family, Resolvase and
+ Invertase subfamily, catalytic domain; members contain a
+ C-terminal DNA binding domain. Serine recombinases
+ catalyze site-specific recombination of DNA molecules by a
+ concerted, four-strand cleavage and...; Region: SR_ResInv;
+ cd03768"
+ /db_xref="CDD:239737"
+ misc_feature 193006..193008
+ /locus_tag="SARI_00207"
+ /note="catalytic nucleophile [active]"
+ /db_xref="CDD:239737"
+ gene 193383..193526
+ /locus_tag="SARI_00208"
+ CDS 193383..193526
+ /locus_tag="SARI_00208"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569297.1"
+ /db_xref="GI:161502185"
+ /translation="MKVIPKFLLFSAEKTASFLIQFTFFHIIKAKSVIFLFFFINIAK
+ TKK"
+ gene complement(193516..194115)
+ /locus_tag="SARI_00209"
+ CDS complement(193516..194115)
+ /locus_tag="SARI_00209"
+ /inference="protein motif:HMMPfam:IPR010351"
+ /inference="similar to AA sequence:REFSEQ:ZP_01495963.1"
+ /note="'COG: NOG26268 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569298.1"
+ /db_xref="GI:161502186"
+ /db_xref="InterPro:IPR010351"
+ /translation="MDDYSASDMRCSDRSESQLKAQFHLTDVSTRANPYTLTKVTSFN
+ QPQPIFHGSRGEGEIIRQQCAAILFDELRALSGLFAMSGPYKPLIKQMIPHIQKANGA
+ PFRYMLLDRALKDHILSDSTPNSSRLRLAGLLKNILTRNISITRQRIKMNCENRFFEG
+ NSPLTDKGKINWRLKNIDVLKEKYDIPKPSSSGYFTVIF"
+ misc_feature complement(<193636..194115)
+ /locus_tag="SARI_00209"
+ /note="Protein of unknown function (DUF3289); Region:
+ DUF3289; cl11840"
+ /db_xref="CDD:159636"
+ misc_feature complement(<193519..>193635)
+ /locus_tag="SARI_00209"
+ /note="Enterobacterial putative membrane protein (DUF943);
+ Region: DUF943; pfam06092"
+ /db_xref="CDD:218892"
+ gene 194213..194431
+ /locus_tag="SARI_00210"
+ CDS 194213..194431
+ /locus_tag="SARI_00210"
+ /inference="similar to AA sequence:REFSEQ:YP_540438.1"
+ /note="'COG: NOG04673 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569299.1"
+ /db_xref="GI:161502187"
+ /translation="MCNQFNEITSMPARHVCQNFFRDALAPLHKYRQNALLDATIALI
+ NGASLTLTSIGRYLPGTAQVKNKIKRVD"
+ gene 194492..195436
+ /locus_tag="SARI_00211"
+ CDS 194492..195436
+ /locus_tag="SARI_00211"
+ /inference="protein motif:HMMPfam:IPR002559"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:REFSEQ:YP_540438.1"
+ /note="'COG: NOG04673 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569300.1"
+ /db_xref="GI:161502188"
+ /db_xref="InterPro:IPR002559"
+ /db_xref="InterPro:IPR012337"
+ /translation="MLTSQLSLCVIAVDWSGYPSQEHHVLRASLICDGRSIPLLRWIV
+ PSEKQQNAKVQQAFLNTLAEAVNPEARVIIVTDAGFQNAWFRHIESLGWDFIGRIRGN
+ IQMRLEAKGEYWFRRQELQASSKPEYLGPGTLARSEYARCDGHFYLHKKEPKGRKNKR
+ SRCGIARPSQLKDASPAAKEPWLIFSSTDDFKPRVIMKLYSRRMQIEQHFRDEKSERF
+ GFGLRASYSRSAGRVLALSLLATLSTIVLWLVGYHAENKGLHLRYQANSVRTRRVITY
+ LTLAENVLRQSPLILKRTVLRTVLNHLARTYQNMVLVY"
+ misc_feature <194663..195190
+ /locus_tag="SARI_00211"
+ /note="Transposase DDE domain; Region: DDE_Tnp_1;
+ pfam01609"
+ /db_xref="CDD:216602"
+ gene 195575..197701
+ /locus_tag="SARI_00212"
+ CDS 195575..197701
+ /locus_tag="SARI_00212"
+ /inference="similar to AA sequence:INSD:AAD40326.1"
+ /note="'KEGG: ehi:68.t00029 3.5e-07 protein phosphatase
+ with leucine-rich repeats K01768;
+ COG: COG4886 Leucine-rich repeat (LRR) protein;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="E3 ubiquitin-protein ligase SspH2"
+ /protein_id="YP_001569301.2"
+ /db_xref="GI:448236183"
+ /translation="MPFYVGSGCRPATISNRRIYRIAWSDTPPEMSSWEKCKEFFCST
+ HQTEALECIRTICHPPAGTTREDVVSRFEQLRTLAYAGCEENIHSGLHGENHFCIMDE
+ DNQEILSVTLDDAGNYTVNCQGYSETHHFTMATEPGVERTEHAEGASGTSCLPATTAP
+ QTAAEYDAVWSAWQRAAPKGEARGRAAVVQEMRDCLKNGNPVLNVGGAGLTTLPDHLP
+ PHITKLIIPRNNYLTRLSRLPPGLRELSVDGNLLASLPALPPGLQSLSVPGNQLPSLP
+ DLPSGLRKLWASGNRLTSLSALPSGLRELIISSNRLTSLPALPSELRELSVSHNLLPS
+ LPELPSGLQELSVSHNRLTRLPESIISLPSYARVNLDGNPLSERTLRTLRNLTSAPGY
+ SGPRIRFDMAGPSVPREARALHLAVADWLMPAREGEPDPADRWHASGQEDNAAAFSLF
+ LDRLSETENFEKDAGFKAQISSWLALLAEDDVLRAKTFAMATEATSSCEDRVTFALHQ
+ MKNVQLVHNAEKGVYDNNLPGLVSTGREMFRMEMLERIALEKVRTLAFVDEIEVCLAY
+ QNKLKESLELTSVTAEMRFFGASGVTTSDLRSAERQVKAAENSEFSEWLLQWGPLHSV
+ LERKEPERFNALREKQISDYEHTYQMLSDTELKPSGLVGNTDAERTIGVRAMESAKKE
+ FLNGLRPLVEEMLGSYLKVKARRRLN"
+ misc_feature 195575..197689
+ /locus_tag="SARI_00212"
+ /note="E3 ubiquitin-protein ligase SspH2; Provisional;
+ Region: PRK15387"
+ /db_xref="CDD:185285"
+ misc_feature 195665..>196003
+ /locus_tag="SARI_00212"
+ /note="pathogenicity island 2 effector protein SseI;
+ Provisional; Region: PRK15372"
+ /db_xref="CDD:185270"
+ misc_feature 196007..196138
+ /locus_tag="SARI_00212"
+ /note="Type III secretion system leucine rich repeat
+ protein; Region: TTSSLRR; pfam12468"
+ /db_xref="CDD:204932"
+ gene 198452..199297
+ /locus_tag="SARI_00213"
+ CDS 198452..199297
+ /locus_tag="SARI_00213"
+ /inference="similar to AA sequence:REFSEQ:NP_311541.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569302.1"
+ /db_xref="GI:161502190"
+ /translation="MNNWSPEHTKDIKSWFKIDTYRKFEDLSLIQFYHEIWARNLFFK
+ EYREEFESRTLMGYFSKIFSGNPFLIEEGQLGYMTPANKLFQPPHFFLTTLDRLAETS
+ IIAMQRGGFLWHEGDNYSINAELREESLSDIMPDQFTRTVMFEIDLASGTDEEIAESL
+ KAALPQWRKVKGIDENPLESVRFGYGTIKKLISYRVIPMLDILVWAAVKKIRVSDDRL
+ SRLLYTDDDEESEMRQSSQIKDTDRPLALKSCTTDFIRQFHYFMNKNSHLKQMKVSDV
+ MKLSD"
+ gene 199577..199783
+ /locus_tag="SARI_00214"
+ CDS 199577..199783
+ /locus_tag="SARI_00214"
+ /inference="protein motif:HMMPfam:IPR010260"
+ /inference="similar to AA sequence:REFSEQ:YP_001177620.1"
+ /note="'COG: COG3311 Predicted transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569303.1"
+ /db_xref="GI:161502191"
+ /db_xref="InterPro:IPR010260"
+ /translation="MNNQATRLIRLPEVLERTGYGKAWIYRLISEGRFPAPVKIGVRA
+ VAFVESEVDEWIQSVIETSRIKVA"
+ misc_feature 199577..199768
+ /locus_tag="SARI_00214"
+ /note="Predicted transcriptional regulator
+ [Transcription]; Region: AlpA; COG3311"
+ /db_xref="CDD:225848"
+ gene 199805..200119
+ /locus_tag="SARI_00215"
+ CDS 199805..200119
+ /locus_tag="SARI_00215"
+ /inference="similar to AA sequence:REFSEQ:YP_001005310.1"
+ /note="'Psort location: cytoskeletal, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569304.1"
+ /db_xref="GI:161502192"
+ /translation="MNIEEFMSEENHMCNLGEDLFGKIFEPGAIYDLPDNEFNRKIVY
+ WLSQYLVGNLRDPLDAIFELNIFDQFYVYETWFSLIKCPVEMKSLSKRIIQYHIGLKT
+ LL"
+ gene 200549..201604
+ /locus_tag="SARI_00216"
+ CDS 200549..201604
+ /locus_tag="SARI_00216"
+ /inference="protein motif:Gene3D:IPR013762"
+ /inference="protein motif:HMMPfam:IPR002104"
+ /inference="protein motif:superfamily:IPR011010"
+ /inference="similar to AA sequence:INSD:ABP61567.1"
+ /note="'COG: COG0582 Integrase;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569305.1"
+ /db_xref="GI:161502193"
+ /db_xref="InterPro:IPR002104"
+ /db_xref="InterPro:IPR011010"
+ /db_xref="InterPro:IPR013762"
+ /translation="MKVIAGSISLLYRFFMRKEINIDERIQKRIFLANHEIDDLIEFT
+ SFNFKNGGENDFGVSNVKKPTKYFRITTIANYLEWLCKILLSHTGQKDTIKEILVFIN
+ NIKRKKPRNNDKYIMDIEKSLNKAQLDSLFSILSPGSNLNPFTETVQKRNNLIFLLLH
+ CFGMRAGELLNLRIGDIDFAESTIAIRRRANDKTDPRVYQPLVKTCERKLIADANLIY
+ EISDYILNDRRKVKNANKHDFLFITYKEGKTQGQPLSFSSYHKIVSVVRQSSSLLSGL
+ TGHKLRHTWNYEFSKAIDNSKNISDEKEQQIRSYLMGWVPGSDTSIIYNRRHIFELSK
+ KTALEQQEQLFKGGFDE"
+ misc_feature 200984..201514
+ /locus_tag="SARI_00216"
+ /note="DNA breaking-rejoining enzymes,
+ intergrase/recombinases, C-terminal catalytic domain. The
+ tyrosine recombinase/integrase family share the same
+ catalytic domain containing six conserved active site
+ residues. The best-studied members of this diverse
+ family...; Region: INT_REC_C; cd01182"
+ /db_xref="CDD:238587"
+ misc_feature order(201041..201043,201383..201385,201392..201394,
+ 201488..201490)
+ /locus_tag="SARI_00216"
+ /note="active site"
+ /db_xref="CDD:238587"
+ misc_feature order(201041..201043,201125..201127,201383..201385,
+ 201392..201394,201488..201490)
+ /locus_tag="SARI_00216"
+ /note="Int/Topo IB signature motif; other site"
+ /db_xref="CDD:238587"
+ misc_feature order(201041..201043,201392..201394)
+ /locus_tag="SARI_00216"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:238587"
+ misc_feature order(201041..201046,201125..201127,201380..201385)
+ /locus_tag="SARI_00216"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:238587"
+ gene 201597..202907
+ /locus_tag="SARI_00217"
+ CDS 201597..202907
+ /locus_tag="SARI_00217"
+ /inference="protein motif:Gene3D:IPR013762"
+ /inference="protein motif:HMMPfam:IPR002104"
+ /inference="protein motif:superfamily:IPR011010"
+ /inference="similar to AA sequence:INSD:ABP61566.1"
+ /note="'COG: COG0582 Integrase;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569306.1"
+ /db_xref="GI:161502194"
+ /db_xref="InterPro:IPR002104"
+ /db_xref="InterPro:IPR011010"
+ /db_xref="InterPro:IPR013762"
+ /translation="MNNLIKHSSDKMSIHEHKIVTSIESHGINIRDLICVMNKSLVCG
+ FVNTLQYYFCSKSHLYVKTIVKNMKNFINNVSPNYIDDKVIIQYQNMQSANKPSYFRG
+ LRPFFTKWFESGYPGIDASAIEIAKHFDLKIKKAGQPILQDDPTVGPLTKEEHTSLIK
+ AMSHAYSIGELSLSDYAISLLISLTGRRPQQLVMLEYKDLLQKNLDTGKVEYLISVPR
+ VKQRGKQLQYRELPIISEVASIVQLQANHSVRLVEQTLGKTLDDHDKGKVPVFLNEDK
+ LLDLAIIDFNFLESNKIYAKPTIANRALKNIVNTVNLISNRTGSLLNATPRRLRYTIA
+ TMLAREGHNANTIAELLDHSSTSSTGIYIKNLAESVERIDSAVSEQLSFVADAFMNGI
+ KSKEKIHLKFCSSRKCQSQNLNVSFPCNECAFFMPVDIGEVNPR"
+ misc_feature 202119..202688
+ /locus_tag="SARI_00217"
+ /note="DNA breaking-rejoining enzymes,
+ intergrase/recombinases, C-terminal catalytic domain. The
+ tyrosine recombinase/integrase family share the same
+ catalytic domain containing six conserved active site
+ residues. The best-studied members of this diverse
+ family...; Region: INT_REC_C; cd01182"
+ /db_xref="CDD:238587"
+ misc_feature order(202158..202160,202575..202577,202584..202586,
+ 202653..202655,202680..202682)
+ /locus_tag="SARI_00217"
+ /note="active site"
+ /db_xref="CDD:238587"
+ misc_feature order(202158..202160,202584..202586,202680..202682)
+ /locus_tag="SARI_00217"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:238587"
+ misc_feature order(202158..202163,202254..202256,202572..202577,
+ 202680..202682)
+ /locus_tag="SARI_00217"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:238587"
+ misc_feature order(202158..202160,202254..202256,202575..202577,
+ 202584..202586,202653..202655,202680..202682)
+ /locus_tag="SARI_00217"
+ /note="Int/Topo IB signature motif; other site"
+ /db_xref="CDD:238587"
+ gene 202904..204778
+ /locus_tag="SARI_00218"
+ CDS 202904..204778
+ /locus_tag="SARI_00218"
+ /inference="protein motif:Gene3D:IPR013762"
+ /inference="protein motif:superfamily:IPR011010"
+ /note="'COG: COG4688 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569307.1"
+ /db_xref="GI:161502195"
+ /db_xref="InterPro:IPR011010"
+ /db_xref="InterPro:IPR013762"
+ /translation="MNNIILFKSKKKLTVENNYNEFISFCRYKLSGLTQTQDWEQYVW
+ KGYVTFRKIGVRYKAFNSKDAMHEDFLDFAKAYIRYQHSLKPLKNYGATMMALRCLEQ
+ ALLQVLNSGLIYNVTAVVFDEAIQIGSKYFEGNVLAKCGIQLEKLSKFLCEHNLVKSG
+ YISWKNHVKQKVKKNYLPEIEDYDRNDKLPDEVALLAIADIFSKNDELLSPRDKFTSS
+ VFALLLCCPSRISEILALPADCEITQKDEKGIERYGLRFYSVKGYGPNIKWIPQVMIP
+ VAKKAIKRLLSLSQNARAFAQWCEKYPDKFYQHELCPKVDEKSKLTVIEVCHALGYPL
+ HDHKSCVLKIKKTSLDGGKSFLNPNDYNYSLSELWEMIISGFSRDFPWYDEEKSIRFS
+ NALCLLNPRQFTLSQIIDIYSFHKPTKGFFFNDIQNKKRHEHGFKNIFARHGYYDIEG
+ QPLLIRSHQPRHLLNTIAHYGEMSELDIAKWSGRVNVNQNRVYNHVSEEDMLDKIKAI
+ KLNRSNYCQRESIPTNELAIDFDSLNQGAIHLTEFGYCVHNYLVRPCTKINQFVECNN
+ ETLNMKSVDRIRLQSVREKVIQLINITQIAFENGDYGADKWLQHHEKNLERINKLLNN
+ "
+ misc_feature 202904..204769
+ /locus_tag="SARI_00218"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG4688"
+ /db_xref="CDD:227032"
+ gene 204775..205179
+ /locus_tag="SARI_00219"
+ CDS 204775..205179
+ /locus_tag="SARI_00219"
+ /inference="similar to AA sequence:INSD:ABP61564.1"
+ /note="'COG: NOG17703 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569308.1"
+ /db_xref="GI:161502196"
+ /translation="MKQEMHMAKHLNRSEIKAITHMILTWDGKITWSDLCESVYKNLN
+ RTITRQSLSAHDEVVEAYRTKKNLSNLKKSGLKKPANLTIAAQQILNLKAENEMLKKQ
+ NNRYKEQFSYWQYNAYRHGLTMEQLNRPFNKK"
+ gene 205267..205701
+ /locus_tag="SARI_00220"
+ CDS 205267..205701
+ /locus_tag="SARI_00220"
+ /inference="similar to AA sequence:INSD:ABP61563.1"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569309.1"
+ /db_xref="GI:161502197"
+ /translation="MHFMDKNIINSEFTLEEQLIIIIDKYISKRYQPGDKSFSYQLYL
+ IFVGYHLKYFYPKRIYSKSNRNIDNIMAMFSSVYKSLTSNLLQRLNNKEGVLRELNSL
+ VNYIDNNQEKAEEIYATVRAQYEMKVIEGELTHEVRVRTVRL"
+ gene complement(205755..206069)
+ /locus_tag="SARI_00221"
+ CDS complement(205755..206069)
+ /locus_tag="SARI_00221"
+ /inference="similar to AA sequence:REFSEQ:YP_049171.1"
+ /note="'Psort location: extracellular, including cell
+ wall, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569310.1"
+ /db_xref="GI:161502198"
+ /translation="MKIYSILTVILTTCLLTACNSEPSQDDIYNAFKIVVDRSNASMK
+ ALNSSIPEKDLLRIDYVKKVSCTEEANNVYNCIVDASISNMKQTKPVKLVKADGVWKE
+ VQ"
+ gene complement(206088..206474)
+ /locus_tag="SARI_00222"
+ CDS complement(206088..206474)
+ /locus_tag="SARI_00222"
+ /inference="protein motif:superfamily:IPR012338"
+ /inference="similar to AA sequence:REFSEQ:NP_311533.1"
+ /note="'COG: NOG23803 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569311.1"
+ /db_xref="GI:161502199"
+ /db_xref="InterPro:IPR012338"
+ /translation="MNRFITSSFFIIVFLLSGCSTSGNQNLKNETPQSLQSKIIKNKT
+ TKSELLTKLGEPDTRTTLDDGNEQWKYFMSNNQFSATTFIPVVGLFTGGSQTQSKTLE
+ IDFKGETVSKWTFSSDNNNTKTGILN"
+ misc_feature complement(<206355..206474)
+ /locus_tag="SARI_00222"
+ /note="lipoprotein NlpI; Provisional; Region: PRK11189"
+ /db_xref="CDD:236875"
+ gene 206504..206602
+ /locus_tag="SARI_00223"
+ CDS 206504..206602
+ /locus_tag="SARI_00223"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569312.1"
+ /db_xref="GI:161502200"
+ /translation="MKLISPYKNNSVCIRSFDFIDKNNDAYEKRKD"
+ gene complement(206516..206788)
+ /locus_tag="SARI_00224"
+ CDS complement(206516..206788)
+ /locus_tag="SARI_00224"
+ /note="'Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569313.1"
+ /db_xref="GI:161502201"
+ /translation="MKNETIKCPFCFTQSPHGVRICIGCHAKVAYGESPLSVAFLFQF
+ VAFGLAWLAFLWTGSTLVSVLTFFISIIILIYKIKRTYADRVVFIR"
+ gene complement(207012..208169)
+ /locus_tag="SARI_00225"
+ CDS complement(207012..208169)
+ /locus_tag="SARI_00225"
+ /inference="protein motif:HMMPfam:IPR005094"
+ /inference="similar to AA sequence:REFSEQ:YP_001177613.1"
+ /note="'COG: NOG10802 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569314.1"
+ /db_xref="GI:161502202"
+ /db_xref="InterPro:IPR005094"
+ /translation="MQKIKRGKSFAGVVQYALKPGSHHKSNPIVIGGNMLGDSASEVI
+ AEFDGTKQLRPDVQKAVWHNSLRLPSGESLTAEQWSSIADDYMKRMGFSDTHLRCYVL
+ HDDQAGQHVHIIASRIDLNGGKLYLGKNENLISTRIISELETRYGLIETAQHKKPRQV
+ KRRKISRNEEMLSRRTGIPSPKEALQQILDKSLADTPDLLTFIKRLQEAEVSWKANIA
+ STGKMNGFSFEYTGIAFKASQLGKGYSWANLQKQLNYNPDHLEALQTGIQTKEALPAH
+ IPMPVPVPVPVPVEQVARDTVRSESIGEKIAEIEMRLREDKRNEIVGKILQKNAVQRQ
+ KHLRFVEWLASIKHYIELLRSFGKTILHKTHTTFSNIYAMKPSKKARKIRL"
+ misc_feature complement(207411..208154)
+ /locus_tag="SARI_00225"
+ /note="Relaxase/Mobilisation nuclease domain; Region:
+ Relaxase; pfam03432"
+ /db_xref="CDD:217554"
+ gene complement(208147..208398)
+ /locus_tag="SARI_00226"
+ CDS complement(208147..208398)
+ /locus_tag="SARI_00226"
+ /inference="similar to AA sequence:REFSEQ:YP_049173.1"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569315.1"
+ /db_xref="GI:161502203"
+ /translation="MASLHKLPTIVPPVNIDTWKTLGEINQKLNRIALHIDSKSKDSQ
+ LTHTELFVVKRQLEELRQQLLNADIWSKSYEGYAEDQKG"
+ gene complement(208585..208752)
+ /locus_tag="SARI_00227"
+ CDS complement(208585..208752)
+ /locus_tag="SARI_00227"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569316.1"
+ /db_xref="GI:161502204"
+ /translation="MTQLIKNSNINKNSLIRILIKFQFNYFVFFKASQPPLNTIMTLT
+ LKLNMLIKTII"
+ gene 208828..211734
+ /locus_tag="SARI_00228"
+ CDS 208828..211734
+ /locus_tag="SARI_00228"
+ /inference="protein motif:HMMPfam:IPR001650"
+ /inference="protein motif:HMMPfam:IPR011545"
+ /inference="protein motif:HMMSmart:IPR001650"
+ /inference="protein motif:HMMSmart:IPR014001"
+ /inference="similar to AA sequence:REFSEQ:ZP_01462331.1"
+ /note="'KEGG: nph:NP0492A 8.9e-35 mer3_1; ATP-dependent
+ DNA helicase 1 K03726;
+ COG: COG1204 Superfamily II helicase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569317.1"
+ /db_xref="GI:161502205"
+ /db_xref="InterPro:IPR001650"
+ /db_xref="InterPro:IPR011545"
+ /db_xref="InterPro:IPR014001"
+ /translation="MKYGLPVNCGIDEDVSSPLFYKENDEFCLTDVQYESLDRGVGKG
+ KSVLVVSPTSTGKTLVGTVALTQGIQEGKNAVFLVTHRALARQKFEDFKKQLLKDFLD
+ NDPSALVLATGDIIEDAFGNTVPSPLNAKLMVATYEKYLGILSASGVPKSMKSTVFVC
+ DEIQLIGDENRGQQVEILLTLIKRAGWAQLVGLSAVLEHRDALKLSQWLEIELIYTST
+ REKHLTYQCHAHNGEVYSCSTKSPEEITSIKSKQPTSSIARTIKNYLEKNKELTPIIV
+ FCMTKKETYTLAQSLVSEYKSPFNTQMDFDFDGVPETLANNMLKEFVQYRVACHSADL
+ IDEEREIIERKILDKEIDVVFATSTLAAGVNFPLGTAFFASWQRWNSDLRKNIPIGSS
+ EFHNMAGRVGRMGSDHSEGNIIYFSNNNADLTSALKYLKFSDMPPLKSRIEPKGFNRL
+ ILQLVASGLSNNIIDLKDIVFNTLSGIVEQDTNLKSFNTWDGCLDTSLDMLTAEGLLI
+ KTAAGDLHATSFGKAVSLAGFNPESGVNLLKYFAKYSNWFSQCIFDIESNGNYKKLII
+ SIFYACFSCPEFISYQGKRPTRYLPYMFTRAVLLDPSKLDIPLYENIWQANLPSINAA
+ KLAFEWIEGEQLRKLEDTFEALTAGMLNDLYRNLAWLLKGVSTIVMACADTRIASDLR
+ PSFLNDEVVNDLRLLPRFINRLAFRVNTGLTDKALWLTTLNKIYPERGFKLTRIEMLN
+ ISSSEYYKPEYLSQGEQEAEEFRLELFKNIKPTPHKKSNWLRDAAKVWKINQRSLAAE
+ RHVLKSKKIGFEKQFKTYYDARGIEYEQAFEVLLSLAEINYIKLDDGKRTGAPDYLLS
+ FTNSPDIVVELKTKLGENLVDFNGATDVLRASELYGYGDNFCVTLCHPGVDPSVLPII
+ EKCGRLSIVEGHDLGEALLRLLSGNLTQEQLWQWLSIPGAASAEDLPMKEYSFN"
+ misc_feature 208912..209490
+ /locus_tag="SARI_00228"
+ /note="DEAD-like helicases superfamily; Region: DEXDc;
+ smart00487"
+ /db_xref="CDD:214692"
+ misc_feature 208981..209412
+ /locus_tag="SARI_00228"
+ /note="DEAD-like helicases superfamily. A diverse family
+ of proteins involved in ATP-dependent RNA or DNA
+ unwinding. This domain contains the ATP-binding region;
+ Region: DEXDc; cd00046"
+ /db_xref="CDD:238005"
+ misc_feature 208987..209001
+ /locus_tag="SARI_00228"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238005"
+ misc_feature 209308..209319
+ /locus_tag="SARI_00228"
+ /note="putative Mg++ binding site [ion binding]; other
+ site"
+ /db_xref="CDD:238005"
+ misc_feature 209761..210042
+ /locus_tag="SARI_00228"
+ /note="Helicase superfamily c-terminal domain; associated
+ with DEXDc-, DEAD-, and DEAH-box proteins, yeast
+ initiation factor 4A, Ski2p, and Hepatitis C virus NS3
+ helicases; this domain is found in a wide variety of
+ helicases and helicase related proteins; may...; Region:
+ HELICc; cl17351"
+ /db_xref="CDD:247905"
+ gene 211866..212681
+ /locus_tag="SARI_00229"
+ CDS 211866..212681
+ /locus_tag="SARI_00229"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569318.1"
+ /db_xref="GI:161502206"
+ /translation="MLNITDRRIIYCLPSIFCQETIKLGNLLIRPLSEAVKDNDNCAK
+ LLMDFPFNRASSVIETLTFKSGDFFTQLNDLEIRDSLEILKFSYFFEFPSSLLDINGF
+ VGNETFECYPVIELNSELTCFGVEHKMPFTNGMSNYLLSLKSYFQYRTVFLENFSLRL
+ TQKDFSYYSVFYGLNKKIDTLDLFKMYNKCWGVYSAYDFSDKALYSKITLELLSSRHV
+ ANGNKVGKTFTLFFEKLRRIIGSIADDELFHVYKEKIDSKIDIVTKRIEDYFF"
+ gene 212683..213030
+ /locus_tag="SARI_00230"
+ CDS 212683..213030
+ /locus_tag="SARI_00230"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569319.1"
+ /db_xref="GI:161502207"
+ /translation="MNIERKNIAHEGKSSHQFINVAPYLVFFPVFLMVLECSDDIQRK
+ DIYRFIFLLSLFMYEVDSWQMIDFETFPSKRTHLQSYINFSRCYHKYVKDNKESAKYM
+ LIGFENWLKEIDG"
+ gene 213073..214737
+ /locus_tag="SARI_00231"
+ CDS 213073..214737
+ /locus_tag="SARI_00231"
+ /inference="protein motif:HMMPfam:IPR002641"
+ /inference="similar to AA sequence:INSD:EDK33637.1"
+ /note="'KEGG: fnu:FN1704 1.3e-07 serine protease;
+ COG: COG1752 Predicted esterase of the alpha-beta
+ hydrolase superfamily;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569320.1"
+ /db_xref="GI:161502208"
+ /db_xref="InterPro:IPR002641"
+ /translation="MKNEKPTIECLAVFEGGGAKGIAFAGALEAAEEQGIKFSGYGGA
+ SSGAIIALLSCFGYKGSEIKSKLKRDKIINLLDKKFLILFYWVRFMSRINYFLSLTFL
+ RKKIPYANCCIGLLFFIPRVFSFVICYLNPISIFTCFFTLITIGVQKGIFKTDKLVET
+ LREYAFDKVYLEVSNSEDRKEKIRSLTFLELEKITGVKLKVIATDILTGTAVELSSIT
+ TPDELVFESVAASSSYPIFFRPSIIKNQILTDGGISCNLPSFLFNPHEFNRLPVYAFD
+ LRTRFFMREDAGKIKISIFLKKLTMSMIDASNNIISDVTGGIIVPVIVSPRFGTFSFN
+ LSDEQLDKIFNQGKVSAKRFMKRDFFTSSMLPAKEYHMYASLIYGNVDYLLKLIQNEI
+ EILIEGVKLQINLYTDITTNQSRIVAFSHSNNFNCKAEYNSYDLVDSDAVCVNAWNNK
+ QIFYSYDESNNRTKIFYPIERSNRFDANYNGLNNKMLALLELEFQAHYLDISFFEDNT
+ IGGAKSIKEVDFSEDSATIIDGYCFVIRNSMLGHQAIFHESKNTHH"
+ misc_feature 213106..>213390
+ /locus_tag="SARI_00231"
+ /note="Patatins and Phospholipases; Region:
+ Patatin_and_cPLA2; cl11396"
+ /db_xref="CDD:245598"
+ misc_feature order(213121..213126,213130..213132,213205..213207)
+ /locus_tag="SARI_00231"
+ /note="active site"
+ /db_xref="CDD:132836"
+ misc_feature 213199..213213
+ /locus_tag="SARI_00231"
+ /note="nucleophile elbow; other site"
+ /db_xref="CDD:132836"
+ misc_feature <213472..213879
+ /locus_tag="SARI_00231"
+ /note="ExoU and VipD-like proteins; homologus to patatin,
+ cPLA2, and iPLA2; Region: Pat_ExoU_VipD_like; cd07207"
+ /db_xref="CDD:132846"
+ gene 214753..214938
+ /locus_tag="SARI_00232"
+ CDS 214753..214938
+ /locus_tag="SARI_00232"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569321.1"
+ /db_xref="GI:161502209"
+ /translation="MKNNDKIVSGSQARDPSKMQFKSNYQNMYTDEGIIVLDAAKERI
+ KRRQKEINRSRQLADLD"
+ gene complement(215199..216470)
+ /locus_tag="SARI_00233"
+ CDS complement(215199..216470)
+ /locus_tag="SARI_00233"
+ /inference="protein motif:Gene3D:IPR013762"
+ /inference="protein motif:HMMPfam:IPR002104"
+ /inference="protein motif:superfamily:IPR010998"
+ /inference="protein motif:superfamily:IPR011010"
+ /inference="similar to AA sequence:REFSEQ:YP_001005326.1"
+ /note="'COG: COG0582 Integrase;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569322.1"
+ /db_xref="GI:161502210"
+ /db_xref="InterPro:IPR002104"
+ /db_xref="InterPro:IPR010998"
+ /db_xref="InterPro:IPR011010"
+ /db_xref="InterPro:IPR013762"
+ /translation="MGPTKKGPKTEGPKMAKIAKKLTDTEIKSTKPADKEINLFDGDG
+ LILRIAPLSKGGKKNWYFRYAVPVSKKRTKMSLGTYPHLTLARARALRDEYLSLLANG
+ IDPQVHNNDKANALKNATEHTLQTVARKWLDEKVKTSGISQDHAEDIWRSLERNIFPG
+ LGNVPVNEIRPKLLKQHLDPIEQRGVLETLRRIISRLNEIFRYAATEELIEFNPADNL
+ GQRFSKPKKQNMPALPPSELPRFLVALNNASIRLETRLLIEWQLLTWVRPGEAVCTRW
+ TDIDTDNSMWNIPAEFMKMKKPHKVPLSKEALRVLNSMKAISGHREWVFPSIKAPLNH
+ MHEQTANAAIIRMGFGGELVAHGMRSIARTAAEESGKFRTEVLEAALAHSKKDEIIAA
+ YNRAEYLTERVALMQWWSDYVQTQKVKAIAA"
+ misc_feature complement(215229..216428)
+ /locus_tag="SARI_00233"
+ /note="integrase; Provisional; Region: PRK09692"
+ /db_xref="CDD:170049"
+ misc_feature complement(215238..216314)
+ /locus_tag="SARI_00233"
+ /note="Bacteriophage P4 integrase. P4-like integrases are
+ found in temperate bacteriophages, integrative plasmids,
+ pathogenicity and symbiosis islands, and other mobile
+ genetic elements. They share the same fold in their
+ catalytic domain and the overall...; Region: INT_P4;
+ cd00801"
+ /db_xref="CDD:238416"
+ misc_feature complement(order(215292..215294,215322..215324,
+ 215394..215396,215403..215405,215589..215591,
+ 215670..215672))
+ /locus_tag="SARI_00233"
+ /note="active site"
+ /db_xref="CDD:238416"
+ misc_feature complement(order(215292..215294,215322..215324,
+ 215394..215396,215403..215405,215589..215591,
+ 215670..215672))
+ /locus_tag="SARI_00233"
+ /note="Int/Topo IB signature motif; other site"
+ /db_xref="CDD:238416"
+ gene complement(216595..216957)
+ /locus_tag="SARI_00234"
+ tmRNA complement(216595..216957)
+ /locus_tag="SARI_00234"
+ /inference="nucleotide motif:Rfam:RF00023"
+ /note="Rfam score 245.08"
+ gene complement(217029..218219)
+ /locus_tag="SARI_00235"
+ CDS complement(217029..218219)
+ /locus_tag="SARI_00235"
+ /inference="protein motif:HMMPfam:IPR006143"
+ /inference="protein motif:HMMTigr:IPR010129"
+ /inference="protein motif:ScanRegExp:IPR006144"
+ /inference="protein motif:superfamily:IPR011053"
+ /inference="similar to AA sequence:REFSEQ:YP_217682.1"
+ /note="'COG: COG0845 Membrane-fusion protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569323.1"
+ /db_xref="GI:161502211"
+ /db_xref="InterPro:IPR006143"
+ /db_xref="InterPro:IPR006144"
+ /db_xref="InterPro:IPR010129"
+ /db_xref="InterPro:IPR011053"
+ /translation="MKTSQHDAAMDDPDIHREREFSGAGRIVLICSLLFLILGVWAWF
+ GRLDEVSTGNGKVIPSSREQVLQSLDGGILAQLTVREGDRVQANQIVARLDPTRLASN
+ VGESAAKYRASLASSARLTAEVSDLPLAFPDELNDWPDLIDAETRLYKSRRAQLADTE
+ VELRDALASVNKELAITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQYYVQARE
+ ALSKANAEVDMLSAILKGREDSVTRLTVRSPVRGIVKNIQVTTIGGVIPPNGEMMEIV
+ PVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLEGVVETISPDTIQDKVK
+ PEIFYYRVFIRTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKIIVDYLIKPFNRAKEA
+ LRER"
+ misc_feature complement(217032..218141)
+ /locus_tag="SARI_00235"
+ /note="type I secretion membrane fusion protein, HlyD
+ family; Region: type_I_hlyD; TIGR01843"
+ /db_xref="CDD:130902"
+ misc_feature complement(217224..217487)
+ /locus_tag="SARI_00235"
+ /note="HlyD family secretion protein; Region: HlyD_3;
+ pfam13437"
+ /db_xref="CDD:222128"
+ gene complement(218200..220380)
+ /locus_tag="SARI_00236"
+ CDS complement(218200..220380)
+ /locus_tag="SARI_00236"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR001140"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /note="'KEGG: pen:PSEEN0144 1.1e-95 type I toxin efflux
+ ATP-binding protein;
+ COG: COG2274 ABC-type bacteriocin/lantibiotic exporters,
+ contain an N-terminal double-glycine peptidase domain;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569324.1"
+ /db_xref="GI:161502212"
+ /db_xref="InterPro:IPR001140"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MTRAAPDVEEILSERDLSQWAQAISHVAGHYRVACSPGSIQANA
+ PWFRGKSRTTALTHLSRQAGLSFHAPGIDKAAFSQWRLPLVVELRDGQLLVIEHANGE
+ DAVDVFMIEEEGQRNRLTFSELLPQIIYVAALRPLSALKDSRVDRYISRFKPDWMREL
+ VLQDIRPYLPVMVAAFLINVLSLAGIVFSMQVYDRVIPAQSYPTLYVLSFGVLVAVLF
+ GFLLREARTHIMDVLGKRADMRISDRVFGHALRLRNSAIPRSTGSFISQLRELEQIRE
+ MITSSTLATIVDLPFFFLFMIVLAVIAPPLAWIAPVSALLMILPGVALQKKLAVLANQ
+ AAHEATLRNAVLVESVQGLEDIKLMQAENRFLQQWNSYIRITGESGLRTRKLTQGLIS
+ WGMSVQSLVYAAVIMFGAPMVIEGSMTTGAVVAASMLGSRMIAPMANLCGVLARWQQV
+ KAAKMGLDNIMQLPTETQHDDSLVRRDILHGHYLFENAQFRYHNDDQRIPLRLVRLEI
+ MPGERIAILGRNGAGKSTLLQAMAGGLEMIQGDARLDNLSLSHIDMADLRRNIGFLSQ
+ NARLFFGTLRENLTLGAPHASDEQIFDALEVSGGAVFVRRLAKGLDHPIMEGGNGLSG
+ GQRQSLLLARMLLRSPNIVLLDEPSASLDEHTEREFIQRLHQWLGNRTLVVATHRVPV
+ LELVERVVVLKEGQLVMDAPKAQALNADRIQSHRREWKNENQSA"
+ misc_feature complement(218254..220323)
+ /locus_tag="SARI_00236"
+ /note="type I secretion system ATPase, LssB family;
+ Region: type_I_sec_LssB; TIGR03375"
+ /db_xref="CDD:234189"
+ misc_feature complement(219070..>219708)
+ /locus_tag="SARI_00236"
+ /note="ABC transporter transmembrane region; Region:
+ ABC_membrane; pfam00664"
+ /db_xref="CDD:216049"
+ misc_feature complement(218281..218940)
+ /locus_tag="SARI_00236"
+ /note="ATP-binding cassette transporter nucleotide-binding
+ domain; Region: ABC_ATPase; cl17201"
+ /db_xref="CDD:247755"
+ misc_feature complement(218806..218829)
+ /locus_tag="SARI_00236"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(order(218347..218349,218440..218445,
+ 218683..218685,218803..218811,218815..218820))
+ /locus_tag="SARI_00236"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(218683..218694)
+ /locus_tag="SARI_00236"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(218488..218517)
+ /locus_tag="SARI_00236"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(218440..218457)
+ /locus_tag="SARI_00236"
+ /note="Walker B; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(218422..218433)
+ /locus_tag="SARI_00236"
+ /note="D-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(218341..218361)
+ /locus_tag="SARI_00236"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213179"
+ gene complement(220377..221786)
+ /locus_tag="SARI_00237"
+ CDS complement(220377..221786)
+ /locus_tag="SARI_00237"
+ /inference="protein motif:HMMPfam:IPR003423"
+ /inference="protein motif:HMMTigr:IPR010130"
+ /inference="similar to AA sequence:REFSEQ:NP_461619.1"
+ /note="'COG: COG1538 Outer membrane protein;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569325.1"
+ /db_xref="GI:161502213"
+ /db_xref="InterPro:IPR003423"
+ /db_xref="InterPro:IPR010130"
+ /translation="MGRVTPAAIVLAFALFHHQTRGAEAPPIITSEGLATDQMLPSLD
+ GSAAELPLSAAAPGNLTLNDAVNRAVNWHPSIREAVGKLLAQNEQIEVARSKYYPQVS
+ AGVNNGYSNTYTDHGYSPSLVLSVSQMLYDFGKVASQVRAETAGAAQQQANVLLSIDT
+ VAHETANAIVQTQSWQQMVEAAEEQLVALDGIGKLTRQRSDEGATSLSDVVQTEARIE
+ SARSQLAQYQANLDSARASLMSWLGWKSLNSISNDFPAKLARSCEIVTPDDRLVPAVL
+ AAWAQANVARANLEYANAQMTPTISLEPSVQHYLNDKYPSHEVLDKTQYSTWVKVEMP
+ IYQGGGLTARRNAASHAVDAAQSTIQRTRLDVRRRLMEARSQAMSLASALQILRRQQQ
+ LSERTRELYQQQYLDLGSRPLLDVLNAEQEVYQARFAELQTESQLHQLQLNCLYNTGA
+ LRQAFALNHRSIQSVEIQP"
+ misc_feature complement(220392..221612)
+ /locus_tag="SARI_00237"
+ /note="type I secretion outer membrane protein, TolC
+ family; Region: type_I_sec_TolC; TIGR01844"
+ /db_xref="CDD:233594"
+ gene complement(221852..233353)
+ /locus_tag="SARI_00238"
+ CDS complement(221852..233353)
+ /locus_tag="SARI_00238"
+ /inference="protein motif:superfamily:IPR008957"
+ /inference="protein motif:superfamily:IPR008964"
+ /inference="protein motif:superfamily:IPR008979"
+ /inference="protein motif:superfamily:IPR011048"
+ /inference="protein motif:superfamily:IPR011049"
+ /note="'KEGG: chu:CHU_1906 3.9e-51 CHU large protein,
+ possible SAP or adhesin AidA-related K01238;
+ COG: COG5295 Autotransporter adhesin;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569326.1"
+ /db_xref="GI:161502214"
+ /db_xref="InterPro:IPR008957"
+ /db_xref="InterPro:IPR008964"
+ /db_xref="InterPro:IPR008979"
+ /db_xref="InterPro:IPR011048"
+ /db_xref="InterPro:IPR011049"
+ /translation="MRLLAVVSKLTGVSTTVESSAVTLNAPSIVKLSVARDEISQLTR
+ INQDLMVTLHSGETITIKNFYVTNDLGASQLVLAESDGTLWWVENPQAGLHFEQIADI
+ NELLVTSGASHETGGAVWPWVLAGAVAAGGIAAIASSGGGDSHHSDSDNPLPDNTNPG
+ GNPPDNTNPDGNPPDNDNPGGTNPDGNNPDSSNPVDTTPPLAPSELLISADGKTVSGQ
+ AEAGSTITIKDPSGNVVGEGKTDSNGKFSIDLTTPHLSGEQLTVTATDDAGNTGPSAT
+ IDAPNIPFPDTPIITAAIDNADPLTGTLSNNQFTNDSTPTLEGTGSAGAVIHIYANGQ
+ EIGTTTVDASGNWRFSITNALTDGENRFTAIATNVKGESSESASFTLTIDTLSPDAPI
+ VELITDNTGLLTGPLQNNDRTDEAKPLFSGQGEPGNTITIKEGSTIIGSATVDENGRW
+ TFMPTTPLSNGEHTFTVEQSDQAGNVSRVTTTPTIIVDTTPPDAAAIDNVAKDGSTVS
+ GTAEAGSTVSIYDPAGNYLGSAITGDNNQFNITLNPAQTHGERLEARIQDAVGNIGPV
+ TEFTASDSQYPAQPIILTVTDDAGAVTGLLKNGDATDDNRPTLSGTAEPGSTISISDN
+ GFPVPTFPLVVADADGKWSFTPSLALPDGDHVFTATATNDRGTSGQSVSFTIDIDTQP
+ PVLENLAVSDIGDKLTGATEAGSTVVIKDSQGNMLGSGTAGDDGTFSISISPAKINGE
+ TLSISVIDKAANSGPVETLNAPDKTAPAAPNGLIVATDGLSVSGQAEAGSTVTIRDSS
+ NTVLGSAVANGNGQFIVPLNTAQTNGQALIATATDVAKNESAAATVIAPDSTAPEMPK
+ DVVISEDGASISGTAEPGSAITITTSDGTPLGSGKVDGEGHFTLPLVPAQTNGEQVTV
+ TATDGANNVSPPATAQAPDITAPDKPIISQVLDDVESFTGPLANGQTTNDSRPTLSGT
+ AEAGARVEVFDNGVSLGLATLQSNGSWTFTPLQNLSEGAHRLTVIATDAKGNASPAAS
+ FDLVVDTQSPQQPVITFITDDAPGMLGSIAHLGLTNDNTPTINGTGEPGSTVHLYQNG
+ ARIADIIVGSSGVWSYAYTTASPLVDDTYTFTVTASDSNGNTTPFSTDFTITIDTLVP
+ AAPGIISVADGDGNTIDTNQLTQESQPRLSGSGTAGDTIILYDNGNIIGQALVGADGR
+ WQFTPPAALGDGTHLLTARANDPAGNESPESISFTLRVDTQAPDAPQIVSAAIAGGEG
+ EVLLANGSITNQRMPTLSGTGEPGAIITLYNNGAVLDTVQVNPQGSWTYPLTSNLSEG
+ LNVLTAIAMDAAGNSSPTSGVFSVTLDTLPPAQPDAPLISDNVAPVIGNIGNNGATND
+ TTPTFSGTGEIGSTIILYNNGSEIGRTTVGDNGSWNFTPAALTPGTYIITVTETDVAG
+ NISPPSASVTFAIDITAPANPVITFAEDNVGDVQDNVASGATTDDNTPVIHGTGDIGS
+ VITLYNGGNVLGVATVDETGTWTLPVTSALPDGTYTLTAIAADAAGNSSGVSNSFTLT
+ VDTVPLQPPVVSEILDDVAPVTGPLTDGAFTNDRTLTINGSGENGSTVTIYDNGIEIG
+ TALVSDGTWTFNTPVLSEASHALTFSATDGAGNTTAQTQPIIITIDVTAPPAPSIQTV
+ ADDGTRVAGLADPYATVEIRNADDILVGSAVANATGEFAVTLSPAQTDGGTLTAIALD
+ RAGNNGPATDFLASDSGLPAVPVITAIEDNVGSVQGNIAAGGATDDATPTLRGTTDIG
+ STVEVFIDGDSAGFATVDASGNWIFEIATPLSESAHSVTVQATNAKGQGGLSEPVRIT
+ IDLSAPAQPIITSATDDVPGVTGTLDNGALTNDSRPTLNGTGEAGATIRILDNGVEIG
+ SATVDQSGNWRFTPNAPLESNTHLFTAVATDPAGNSGQPSDGFTLTIDALAPDVPVII
+ SVIDDNNQPSIPVSPGQSTDDRQPILNGTGEPGATITIFDNGTPLGTTQVNESGSWSF
+ PVTSNLSEGSHDLTVSATDPAGNTSAVSTPWTIVVDITPPAIPVLTSVVDDRPGITGD
+ LVSGQLTNDATPTLNGRGEAGATITVYLDGNPTPIGTTTVNSDGTWSFTPQTPIANGN
+ HTLTLSATDPAGNSSAVSSGFVLTIDATPPAAPVIASVADNTAPVTGIVPNGGSTNET
+ RPTLAGTGEAGSTISIYNGSALVGTAQVQANGSWSFTPPTSLSAGVWNLTATATDAAG
+ NTSVASETRTFTIDTTAPAAPVISTVYDGTGPITGNLSPGQMTDEVRPVISGTREANT
+ TIRLYDNGTLLAEIPADNSSSWRYTPDASLATGNHVITVIAVDAAGNASPVSDSVNFV
+ VDTTPPLAPVITSVSDDQAPGLGTIANGQSTNDPTPTFSGTAEAGATITLYENGTVIG
+ TTTAQPDGAWSVSTSTLASGTHVITAVATDAAGNGSPNSTAFTLTVDTTAPQTPILTS
+ VVDDVAGGATGNLANGQITNDNRPTLNGTAEAGSVVSIYDGGTLLGVTTADAGGAWSF
+ APTTGLSDGTRTLTVTATDPAGNVSPVTDSFTIVVDTLAPTVPLITSIVDDVPNNTGA
+ IGNGQSTNDTLPTLNGTAEANSTVSIFDNGALVATVTANANGNWSWTPTTALGQGSHA
+ YSVSAADAAGNVSAASQPTTIIVDTIAPGAPGNLTINATGNRVTGTAEAGSTVTITTD
+ TGVVLGTATADGTGSFSAALTPAQTNGQPLLAFAQDKAGNTGITAGFTAPDTRVPEAP
+ IITTVVDDVGIYTGAIANGQVTNDAQPTLNGTAQAGATVSIYNNGALLGTTTANASGN
+ WSFTPAGNLTEGSHAFTATATNANGTGSVSTAATVIVDTQAPGTPSGTLSADGGSLSG
+ LAEANSTVTVTLAGGITLTTTAGSNGAWSLTLPTKQIEGQLINVTATDAAGNASGTLG
+ ITAPILPLAARDNITSLDLTSTADTSTQNYSDYGLLLVGALGNVASVLGNDIAQVEFT
+ IAEGGTGDVTIDAAATGIVLSLLSTQEIVVQRYDTSLGAWTTIVNTAVGDFANLLTLT
+ GSGVTLNLSGLGEGQYRVLTYNTSLLATGSYTSLDVDVHQTSAGIISGPTMSTGNVMA
+ DDTAPTGTTVTAITNANGVSTPVGAGGVDIQGQYGTLHINQDGSYTYTLTNPTAGYGH
+ KESFTYTITQNGVGSSSAQLVINLGPAPVPGSVVATDNNASLVFDTHVSYVNNGPSTQ
+ SGVTVLSVGLGNVLNANLLDDMTNPIIFNVEEGATRTMTLQGTVGGVSLASSFDLYVY
+ RFNDAIQQYEQFRVQKGWINTLLLAGQSQPLTLTLPGGEYLFVLNTASGISVLTGYTL
+ TISQDHTYAVDSITTSTTGNVLTNDVAPADALLTEVNGVAISATGTTNVNGLYGTLTI
+ DAKGNYTYTLKNGVGADSIKTPDSFIYTVKAPNGDTDTASLNITPTARALDAINDVSD
+ TLSVATLQDTAAWLDSSVGSASWGLLGKSGSGSGTFDVATGTVLKGASLVFDVSTLIT
+ LGNLNISWAILENGTVIRNGTVPVANITLGGATVTVNLSGLELDAGTYTLNFTGTNTL
+ AGAATITPRVIGTTVDLDNFETSGTHTVLGNIFDGSDAAGAMDQLNTVNTRLNISGYN
+ GSASTLDASTNTTSATIQGHYGTLQINLDGAYTYTLNNGIAISSITSKEVFTYQLDDK
+ MGHTDSATLTIDMVPQIVSTNQNDVLIGSAYGDTLIYHLLNGADATGGNGTDRWQNFS
+ TAQGDKIDIHELLTGWDHQAATLGNFVQVHTSGANTVISVDRDGAGSAFKSTDLVTLE
+ NVQLTLNDLLQNNHLVIGG"
+ misc_feature complement(232190..232342)
+ /locus_tag="SARI_00238"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(231305..231454)
+ /locus_tag="SARI_00238"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(230234..230383)
+ /locus_tag="SARI_00238"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(229613..229759)
+ /locus_tag="SARI_00238"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(228992..229141)
+ /locus_tag="SARI_00238"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(228683..228835)
+ /locus_tag="SARI_00238"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(<228425..228538)
+ /locus_tag="SARI_00238"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(227186..227341)
+ /locus_tag="SARI_00238"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(226868..227023)
+ /locus_tag="SARI_00238"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(226556..226711)
+ /locus_tag="SARI_00238"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(226244..226390)
+ /locus_tag="SARI_00238"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(225440..226330)
+ /locus_tag="SARI_00238"
+ /note="Putative flagellar system-associated repeat;
+ Region: SWM_repeat; pfam13753"
+ /db_xref="CDD:222362"
+ misc_feature complement(225935..226087)
+ /locus_tag="SARI_00238"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(225620..225775)
+ /locus_tag="SARI_00238"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(221864..222106)
+ /locus_tag="SARI_00238"
+ /note="type I secretion C-terminal target domain (VC_A0849
+ subclass); Region: T1SS_VCA0849; TIGR03661"
+ /db_xref="CDD:234299"
+ gene 233648..233782
+ /locus_tag="SARI_00239"
+ CDS 233648..233782
+ /locus_tag="SARI_00239"
+ /note="'Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569327.1"
+ /db_xref="GI:161502215"
+ /translation="MGWQTIKDGFLFIFMFYRIFLIFIFCFFNIITPPFVKVFSNIKF
+ "
+ gene complement(233968..234495)
+ /gene="smpB"
+ /locus_tag="SARI_00240"
+ CDS complement(233968..234495)
+ /gene="smpB"
+ /locus_tag="SARI_00240"
+ /inference="protein motif:BlastProDom:IPR000037"
+ /inference="protein motif:HMMPfam:IPR000037"
+ /inference="protein motif:HMMTigr:IPR000037"
+ /inference="protein motif:ScanRegExp:IPR000037"
+ /inference="similar to AA sequence:REFSEQ:YP_217675.1"
+ /note="binds to ssrA RNA (tmRNA) and is required for its
+ successful binding to ribosomes; also appears to function
+ in the trans-translation step by promoting accommodation
+ of tmRNA into the ribosomal A site; SmpB protects the
+ tmRNA from RNase R degradation in Caulobacter crescentus;
+ both the tmRNA and SmpB are regulated in cell
+ cycle-dependent manner; functions in release of stalled
+ ribosomes from damaged mRNAs and targeting proteins for
+ degradation"
+ /codon_start=1
+ /transl_table=11
+ /product="SsrA-binding protein"
+ /protein_id="YP_001569328.1"
+ /db_xref="GI:161502216"
+ /db_xref="InterPro:IPR000037"
+ /translation="MGCFRYQITYEFTTLMTKKKAHKPGSATIALNKRARHEYFIEEE
+ FEAGLALQGWEVKSLRAGKANIGDSYVILKDGEAWLFGANFTPMAVASTHVVCDPTRT
+ RKLLLNQRELDSLYGRINREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDLKER
+ EWQLDKARIMKHAGR"
+ misc_feature complement(234052..234402)
+ /gene="smpB"
+ /locus_tag="SARI_00240"
+ /note="Small protein B (SmpB) is a component of the
+ trans-translation system in prokaryotes for releasing
+ stalled ribosome from damaged messenger RNAs; Region:
+ SmpB; cd09294"
+ /db_xref="CDD:187755"
+ misc_feature complement(order(234079..234081,234163..234180,
+ 234265..234267,234316..234318,234325..234330,
+ 234334..234339,234343..234360))
+ /gene="smpB"
+ /locus_tag="SARI_00240"
+ /note="SmpB-tmRNA interface; other site"
+ /db_xref="CDD:187755"
+ gene 234620..235075
+ /locus_tag="SARI_00241"
+ CDS 234620..235075
+ /locus_tag="SARI_00241"
+ /inference="protein motif:HMMPfam:IPR005031"
+ /inference="protein motif:ScanRegExp:IPR004827"
+ /inference="similar to AA sequence:REFSEQ:NP_457156.1"
+ /note="'KEGG: tfu:Tfu_1222 0.00068 actinorhodin polyketide
+ synthase bifunctional cyclase/dehydratase K05554;
+ COG: COG2867 Oligoketide cyclase/lipid transport protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569329.1"
+ /db_xref="GI:161502217"
+ /db_xref="InterPro:IPR004827"
+ /db_xref="InterPro:IPR005031"
+ /translation="MLMGIAMPQISRTALVPYSAEQMYQLVNDVQSYPQFLPGCVGSR
+ VLESSPAQMTAAVDVSKAGISKTFTTRNQLTRNQSILMHLVDGPFKKLIGGWKFTPLS
+ PEACRIEFQLDFEFTNKLIELAFGRVFKELASNMVQAFTVRAKEVYRAG"
+ misc_feature 234647..235060
+ /locus_tag="SARI_00241"
+ /note="Coenzyme Q-binding protein COQ10p and similar
+ proteins; Region: COQ10p_like; cd07813"
+ /db_xref="CDD:176855"
+ misc_feature order(234647..234649,234653..234655,234659..234661,
+ 234686..234694,234698..234703,234746..234748,
+ 234776..234778,234782..234784,234788..234790,
+ 234794..234796,234827..234829,234833..234835,
+ 234839..234841,234857..234859,234863..234865,
+ 234896..234901,234905..234907,234911..234913,
+ 234941..234943,234947..234949,234953..234955,
+ 234959..234961,234992..235006,235010..235018,
+ 235022..235030,235037..235039)
+ /locus_tag="SARI_00241"
+ /note="putative coenzyme Q binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:176855"
+ gene 235080..235355
+ /locus_tag="SARI_00242"
+ CDS 235080..235355
+ /locus_tag="SARI_00242"
+ /inference="protein motif:HMMPfam:IPR005346"
+ /inference="similar to AA sequence:INSD:CAD05864.1"
+ /note="'COG: COG2914 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569330.1"
+ /db_xref="GI:161502218"
+ /db_xref="InterPro:IPR005346"
+ /translation="MVEVAYALPKKQYLLRVTLEQGATVEEAIRASGLLELRTDIDLA
+ KNKVGVYSRPVKLTDTVQDGDRVEIYRPLIADPKALRRQRAEKSAGR"
+ misc_feature 235083..235352
+ /locus_tag="SARI_00242"
+ /note="hypothetical protein; Validated; Region: PRK01777"
+ /db_xref="CDD:234982"
+ gene complement(235515..235853)
+ /locus_tag="SARI_00243"
+ CDS complement(235515..235853)
+ /locus_tag="SARI_00243"
+ /inference="protein motif:HMMPfam:IPR007450"
+ /inference="protein motif:ScanRegExp:IPR002048"
+ /inference="similar to AA sequence:REFSEQ:YP_217672.1"
+ /note="'COG: COG2913 Small protein A (tmRNA-binding);
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569331.1"
+ /db_xref="GI:161502219"
+ /db_xref="InterPro:IPR002048"
+ /db_xref="InterPro:IPR007450"
+ /translation="MRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLTPTDVA
+ KVRVGMTQQQVAYALGTPMMTDPFGTNTWFYVFRQQPGHENVTQQTLTLTFNSSGVLT
+ HIDNKPALTK"
+ misc_feature complement(235518..235853)
+ /locus_tag="SARI_00243"
+ /note="outer membrane biogenesis protein BamE;
+ Provisional; Region: PRK11548"
+ /db_xref="CDD:183190"
+ misc_feature complement(235539..235751)
+ /locus_tag="SARI_00243"
+ /note="SmpA / OmlA family; Region: SmpA_OmlA; pfam04355"
+ /db_xref="CDD:202983"
+ gene complement(236003..237664)
+ /locus_tag="SARI_00244"
+ CDS complement(236003..237664)
+ /locus_tag="SARI_00244"
+ /inference="protein motif:HMMPfam:IPR003395"
+ /inference="protein motif:HMMTigr:IPR004604"
+ /inference="similar to AA sequence:INSD:AAO70209.1"
+ /note="'KEGG: yps:YPTB0915 3.2e-06 sbcC; putative
+ ATP-dependent dsDNA exonuclease K03546;
+ COG: COG0497 ATPase involved in DNA repair;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="recombination and repair protein"
+ /protein_id="YP_001569332.1"
+ /db_xref="GI:161502220"
+ /db_xref="InterPro:IPR003395"
+ /db_xref="InterPro:IPR004604"
+ /translation="MLAQLTISNFAIVRELEIDFQSGMTVITGETGAGKSIAIDALGL
+ CLGGRAEADMVRTGATRADLCARFSLKDTPAALRWLEENQLEEGRECLLRRVISSDGR
+ SRGFINGTAVPLSQLRELGQLLIQIHGQHAHQQLTKPEQQKSLLDSYANESALAQLMA
+ AHYQLWHQSCRDLAHHQQQSQERAARAELLQYQLKELNDFNPQAGEFEQIDEEYKRLA
+ NSGQLLTTSQNALALLADGEDVNLQSQLYSAKQLVSELVGMDSKLSGILDMLEEATIQ
+ LTEASDELRHYCERLDLDPNRLFELEQRIAKQISLARKHHVSPEALPQLHQSLLEEQQ
+ QLDDQADSLETLTLAVNKHRQQALETAQALHQQRLFYAQELGQLITESMHQLSMPHGL
+ FTIDVKFDEHHLSSDGADRVEFKVTTNPGQPLQPIVKVASGGELSRIALAIQVITARK
+ METPALIFDEVDVGISGPTAAVVGKLLRQLGESTQVMCVTHLPQVAGCGHQHFFVSKE
+ TDGAMTETHMQPLDKRARLQELARLLGGSEVTRNTLANAKELLAA"
+ misc_feature complement(236006..237664)
+ /locus_tag="SARI_00244"
+ /note="recombination and repair protein; Provisional;
+ Region: PRK10869"
+ /db_xref="CDD:236781"
+ misc_feature complement(<237221..237661)
+ /locus_tag="SARI_00244"
+ /note="ATP-binding cassette domain of RecN; Region:
+ ABC_RecN; cd03241"
+ /db_xref="CDD:213208"
+ misc_feature complement(237557..237580)
+ /locus_tag="SARI_00244"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213208"
+ misc_feature complement(order(237248..237250,237554..237562,
+ 237566..237571))
+ /locus_tag="SARI_00244"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213208"
+ misc_feature complement(237248..237259)
+ /locus_tag="SARI_00244"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213208"
+ misc_feature complement(236057..>236467)
+ /locus_tag="SARI_00244"
+ /note="ATP-binding cassette domain of RecN; Region:
+ ABC_RecN; cd03241"
+ /db_xref="CDD:213208"
+ misc_feature complement(236345..236374)
+ /locus_tag="SARI_00244"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213208"
+ misc_feature complement(236285..236302)
+ /locus_tag="SARI_00244"
+ /note="Walker B; other site"
+ /db_xref="CDD:213208"
+ misc_feature complement(236267..236278)
+ /locus_tag="SARI_00244"
+ /note="D-loop; other site"
+ /db_xref="CDD:213208"
+ misc_feature complement(236186..236206)
+ /locus_tag="SARI_00244"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213208"
+ unsure 236847..236995
+ /note="Sequence derived from one plasmid subclone"
+ unsure 237156..237258
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(237750..238628)
+ /locus_tag="SARI_00245"
+ CDS complement(237750..238628)
+ /locus_tag="SARI_00245"
+ /inference="protein motif:HMMPfam:IPR002504"
+ /inference="similar to AA sequence:PDB:2AN1"
+ /note="'KEGG: spt:SPA2542 1.9e-137 yfjB; Probable
+ inorganic polyphosphate/ATP-NAD kinase K00858;
+ COG: COG0061 Predicted sugar kinase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="inorganic polyphosphate/ATP-NAD kinase"
+ /protein_id="YP_001569333.2"
+ /db_xref="GI:448236184"
+ /db_xref="InterPro:IPR002504"
+ /translation="MNNHFKCIGIVGHPRHPTALTTHEMLYRWLCAQGYEVIVEQQIA
+ HELQLKNVPTGTLAEIGQQADLAVVVGGDGNMLGAARTLARYDINVIGINRGNLGFLT
+ DLDPDNALQQLSDVLEGRYISEQRFLLEAQVCQQDCQKRISTAINEVVLHPGKVAHMI
+ EFEVYIDEIFAFSQRSDGLIISTPTGSTAYSLSAGGPILTPSLDAITLVPMFPHTLSA
+ RPLVINSNSTIRLRFSHRRSDLEISCDSQIALPIQEGEDVLIRRCDYHLNLIHPKDYS
+ YFNTLSTKLGWSKKLF"
+ misc_feature complement(237753..238628)
+ /locus_tag="SARI_00245"
+ /note="inorganic polyphosphate/ATP-NAD kinase;
+ Provisional; Region: ppnK; PRK03378"
+ /db_xref="CDD:235122"
+ misc_feature complement(237756..238565)
+ /locus_tag="SARI_00245"
+ /note="inorganic polyphosphate/ATP-NAD kinase;
+ Provisional; Region: ppnK; PRK02231"
+ /db_xref="CDD:167337"
+ gene 238581..239345
+ /locus_tag="SARI_00246"
+ CDS 238581..239345
+ /locus_tag="SARI_00246"
+ /inference="protein motif:FPrintScan:IPR000740"
+ /inference="protein motif:Gene3D:IPR009012"
+ /inference="protein motif:Gene3D:IPR013805"
+ /inference="protein motif:HMMPfam:IPR000740"
+ /inference="protein motif:ScanRegExp:IPR000740"
+ /inference="protein motif:superfamily:IPR009012"
+ /inference="similar to AA sequence:REFSEQ:YP_217670.1"
+ /note="with DnaK and DnaJ acts in response to hyperosmotic
+ and heat shock by preventing the aggregation of
+ stress-denatured proteins; may act as a thermosensor"
+ /codon_start=1
+ /transl_table=11
+ /product="heat shock protein GrpE"
+ /protein_id="YP_001569334.1"
+ /db_xref="GI:161502222"
+ /db_xref="InterPro:IPR000740"
+ /db_xref="InterPro:IPR009012"
+ /db_xref="InterPro:IPR013805"
+ /translation="MTRMSHNADTLEMIIHFSEVLVAKIDDNVSASLETLNLIPIISE
+ VSEMNAKKNAEKFMSSKEQKTPEGQAPEEIIMDQHEEVEAVEPNDSAEQVDPRDEKIA
+ NLEVQLAEAQTRERDTVLRIKAEMENLRRRTEQDIEKAHKFALEKFVNELLPVIDSLD
+ RALEVADKANPDMAAMVEGIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMVE
+ SEEIPAGNVLGIMQKGYTLNGRTIRAAMVTVAKAKG"
+ misc_feature 238752..239339
+ /locus_tag="SARI_00246"
+ /note="Molecular chaperone GrpE (heat shock protein)
+ [Posttranslational modification, protein turnover,
+ chaperones]; Region: GrpE; COG0576"
+ /db_xref="CDD:223649"
+ misc_feature 238923..239327
+ /locus_tag="SARI_00246"
+ /note="GrpE is the adenine nucleotide exchange factor of
+ DnaK (Hsp70)-type ATPases. The GrpE dimer binds to the
+ ATPase domain of Hsp70 catalyzing the dissociation of ADP,
+ which enables rebinding of ATP, one step in the Hsp70
+ reaction cycle in protein folding; Region: GrpE; cd00446"
+ /db_xref="CDD:238252"
+ misc_feature order(238923..238925,238932..238937,238944..238946,
+ 238956..238958,238965..238970,239010..239012,
+ 239022..239024,239031..239033,239052..239054,
+ 239064..239066,239118..239120,239127..239129,
+ 239160..239162)
+ /locus_tag="SARI_00246"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238252"
+ misc_feature order(238971..238973,239202..239204,239211..239225,
+ 239271..239273,239298..239300,239310..239312)
+ /locus_tag="SARI_00246"
+ /note="hsp70 (ATPase domain) interactions [polypeptide
+ binding]; other site"
+ /db_xref="CDD:238252"
+ unsure 239206..239342
+ /locus_tag="SARI_00246"
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(239406..240647)
+ /locus_tag="SARI_00247"
+ CDS complement(239406..240647)
+ /locus_tag="SARI_00247"
+ /inference="protein motif:HMMPfam:IPR000644"
+ /inference="protein motif:HMMPfam:IPR002550"
+ /inference="protein motif:HMMPfam:IPR005170"
+ /inference="similar to AA sequence:INSD:AAL21568.1"
+ /note="'KEGG: ece:Z3906m 3.8e-203 yfjD; uncharacterized
+ CBS domain-containing protein K00638;
+ COG: COG4536 Putative Mg2+ and Co2+ transporter CorB;
+ Psort location: endoplasmic reticulum, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569335.1"
+ /db_xref="GI:161502223"
+ /db_xref="InterPro:IPR000644"
+ /db_xref="InterPro:IPR002550"
+ /db_xref="InterPro:IPR005170"
+ /translation="MVVISAYFSGSETGMMTLNRYRLRHMAKQGNRSAKRVEKLLRKP
+ DRLISLVLIGNNLVNILASALGTIVGMRLYGDAGVAIATGVLTFVVLVFAEVLPKTIA
+ ALYPEKVAYPSSFLLAPLQILMMPLVWLLNTITRLLMRLMGIKADIVVSGSLSKEELR
+ TIVHESRSQISRRNQDMLLSVLDLEKVSVDDIMVPRNEIIGIDINDDWKSIERQLTHS
+ PHGRIVLYRDSLDDAISMLRVREAWRLMAEKKEFTKEMMLRAADEIYYVPEGTPLSTQ
+ LIKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGSV
+ IIDGTANVREINKAFNWHLPEDDARTVNGVILEALEEIPVAGTRVRIEQYDIDILDVQ
+ ENMIKQVKVVPVKPLRESVAE"
+ misc_feature complement(239409..240647)
+ /locus_tag="SARI_00247"
+ /note="hypothetical protein; Provisional; Region:
+ PRK11573"
+ /db_xref="CDD:236933"
+ misc_feature complement(240141..240647)
+ /locus_tag="SARI_00247"
+ /note="Domain of unknown function DUF21; Region: DUF21;
+ pfam01595"
+ /db_xref="CDD:216595"
+ misc_feature complement(239721..240059)
+ /locus_tag="SARI_00247"
+ /note="This cd contains two tandem repeats of the
+ cystathionine beta-synthase (CBS pair) domains associated
+ with the CorC_HlyC domain. CorC_HlyC is a transporter
+ associated domain. This small domain is found in Na+/H+
+ antiporters, in proteins involved in...; Region:
+ CBS_pair_CorC_HlyC_assoc; cd04590"
+ /db_xref="CDD:239963"
+ misc_feature complement(239436..239669)
+ /locus_tag="SARI_00247"
+ /note="Transporter associated domain; Region: CorC_HlyC;
+ smart01091"
+ /db_xref="CDD:215020"
+ gene complement(240712..241503)
+ /locus_tag="SARI_00248"
+ CDS complement(240712..241503)
+ /locus_tag="SARI_00248"
+ /inference="protein motif:HMMPfam:IPR002541"
+ /inference="similar to AA sequence:INSD:AAO70204.1"
+ /note="'KEGG: sat:SYN_00150 3.3e-05 heme export protein
+ apocytochrome heme-lyase;
+ COG: COG4137 ABC-type uncharacterized transport system,
+ permease component;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569336.1"
+ /db_xref="GI:161502224"
+ /db_xref="InterPro:IPR002541"
+ /translation="MPVFALLALVAYSFSLALIVPGLLQKNSGWRRMAILSAVIALVC
+ HAVALESRILPGGDSGQNLSLLNVGSLVSLMICTVMTVVASRNRGWLLLPIVYAFALI
+ NLAFATFMPNEYITHLEATPGMMVHIGLSLFSYATLIIAALYALQLAWIDYQLKNKKL
+ AFSNEMPPLMSIERKMFHITQIGVVLLTLTLCTGLFYMHNLFSIENIDKAVLSIVAWF
+ VYIVLLWGHYHEGWRGRRVVWFNVAGAGLLTLAYFGSRILQQFVS"
+ misc_feature complement(240715..241503)
+ /locus_tag="SARI_00248"
+ /note="ABC-type uncharacterized transport system, permease
+ component [General function prediction only]; Region:
+ COG4137"
+ /db_xref="CDD:226621"
+ gene 241669..243030
+ /locus_tag="SARI_00249"
+ CDS 241669..243030
+ /locus_tag="SARI_00249"
+ /inference="protein motif:BlastProDom:IPR000897"
+ /inference="protein motif:Gene3D:IPR004125"
+ /inference="protein motif:Gene3D:IPR013822"
+ /inference="protein motif:HMMPfam:IPR000897"
+ /inference="protein motif:HMMPfam:IPR004125"
+ /inference="protein motif:HMMPfam:IPR013822"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR004780"
+ /inference="protein motif:ScanRegExp:IPR000897"
+ /inference="protein motif:superfamily:IPR013822"
+ /inference="similar to AA sequence:INSD:CAD05856.1"
+ /note="with 4.5S RNA forms a signal recognition particle
+ involved in targeting and integration of inner membrane
+ proteins"
+ /codon_start=1
+ /transl_table=11
+ /product="signal recognition particle protein"
+ /protein_id="YP_001569337.1"
+ /db_xref="GI:161502225"
+ /db_xref="InterPro:IPR000897"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR004125"
+ /db_xref="InterPro:IPR004780"
+ /db_xref="InterPro:IPR013822"
+ /translation="MFDNLTDRLSRTLRNISGRGRLTEDNVKETLREVRMALLEADVA
+ LPVVREFINRVKEKAVGHEVNKSLTPGQEFVKIVRSELVAAMGEENQTLNLAAQPPAV
+ VLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFF
+ SSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETL
+ FVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVG
+ EKTDALEPFHPDRIASRILGMGDVLSLIEDIESKVDRAQAEKLATKLKKGDGFDLNDF
+ LEQLKQMKNMGGMASLMGKLPGMGQIPDNVKSQMDDKVLVRMEAIINSMTLKERAKPE
+ IIKGSRKRRIAQGCGMQVQDVNRLLKQFDDMQRMMKKMKKGGMAKMMRSMKGMMPPGF
+ PGR"
+ misc_feature 241669..242943
+ /locus_tag="SARI_00249"
+ /note="signal recognition particle protein; Provisional;
+ Region: PRK10867"
+ /db_xref="CDD:236780"
+ misc_feature 241693..241926
+ /locus_tag="SARI_00249"
+ /note="SRP54-type protein, helical bundle domain; Region:
+ SRP54_N; smart00963"
+ /db_xref="CDD:214941"
+ misc_feature 241969..242490
+ /locus_tag="SARI_00249"
+ /note="The signal recognition particle (SRP) mediates the
+ transport to or across the plasma membrane in bacteria and
+ the endoplasmic reticulum in eukaryotes. SRP recognizes
+ N-terminal sighnal sequences of newly synthesized
+ polypeptides at the ribosome. The...; Region: SRP;
+ cd03115"
+ /db_xref="CDD:239389"
+ misc_feature 241987..242010
+ /locus_tag="SARI_00249"
+ /note="P loop; other site"
+ /db_xref="CDD:239389"
+ misc_feature order(242080..242082,242245..242247,242410..242412,
+ 242419..242424)
+ /locus_tag="SARI_00249"
+ /note="GTP binding site [chemical binding]; other site"
+ /db_xref="CDD:239389"
+ misc_feature 242653..242943
+ /locus_tag="SARI_00249"
+ /note="Signal peptide binding domain; Region: SRP_SPB;
+ pfam02978"
+ /db_xref="CDD:202493"
+ gene 243246..243530
+ /gene="rpsP"
+ /locus_tag="SARI_00250"
+ CDS 243246..243530
+ /gene="rpsP"
+ /locus_tag="SARI_00250"
+ /inference="protein motif:BlastProDom:IPR000307"
+ /inference="protein motif:Gene3D:IPR000307"
+ /inference="protein motif:HMMPanther:IPR000307"
+ /inference="protein motif:HMMPfam:IPR000307"
+ /inference="protein motif:HMMTigr:IPR000307"
+ /inference="protein motif:ScanRegExp:IPR000307"
+ /inference="protein motif:superfamily:IPR000307"
+ /inference="similar to AA sequence:REFSEQ:YP_217664.1"
+ /note="binds to lower part of 30S body where it stabilizes
+ two domains; required for efficient assembly of 30S; in
+ Escherichia coli this protein has nuclease activity"
+ /codon_start=1
+ /transl_table=11
+ /product="30S ribosomal protein S16"
+ /protein_id="YP_001569338.1"
+ /db_xref="GI:161502226"
+ /db_xref="InterPro:IPR000307"
+ /translation="MGPGVLFTQEDVMVTIRLARHGAKKRPFYQVVVTDSRNARNGRF
+ IERVGFFNPIASEKEEGTRLDLDRIAHWVGQGATISDRVAALIKEVKKAA"
+ misc_feature 243282..243506
+ /gene="rpsP"
+ /locus_tag="SARI_00250"
+ /note="30S ribosomal protein S16; Reviewed; Region: rpsP;
+ PRK00040"
+ /db_xref="CDD:234588"
+ gene 243546..244097
+ /gene="rimM"
+ /locus_tag="SARI_00251"
+ CDS 243546..244097
+ /gene="rimM"
+ /locus_tag="SARI_00251"
+ /inference="protein motif:HMMPfam:IPR002676"
+ /inference="protein motif:HMMPfam:IPR007903"
+ /inference="protein motif:HMMTigr:IPR011961"
+ /inference="protein motif:superfamily:IPR011033"
+ /inference="similar to AA sequence:INSD:AAO70201.1"
+ /note="Essential for efficient processing of 16S rRNA"
+ /codon_start=1
+ /transl_table=11
+ /product="16S rRNA-processing protein RimM"
+ /protein_id="YP_001569339.1"
+ /db_xref="GI:161502227"
+ /db_xref="InterPro:IPR002676"
+ /db_xref="InterPro:IPR007903"
+ /db_xref="InterPro:IPR011033"
+ /db_xref="InterPro:IPR011961"
+ /translation="MMGKQLTAQVPAEPVVLGKMGSSYGIRGWLRVFSSTEDAESIFD
+ YQPWFIQKADQWQQVQLESWKHHNQDLIIKLKGVDDRDAANLLTNCEIVVDSSQLPAL
+ EEGDYYWKDLMGCQVVTAEGYDLGKVIDMMETGSNDVLVIKANLKDAFGIKERLVPFL
+ DGQVIKKVDLATRTIEVDWDPGF"
+ misc_feature 243576..244094
+ /gene="rimM"
+ /locus_tag="SARI_00251"
+ /note="16S rRNA-processing protein RimM; Provisional;
+ Region: rimM; PRK00122"
+ /db_xref="CDD:234650"
+ misc_feature 243591..243839
+ /gene="rimM"
+ /locus_tag="SARI_00251"
+ /note="RimM N-terminal domain; Region: RimM; pfam01782"
+ /db_xref="CDD:216696"
+ misc_feature 243855..244079
+ /gene="rimM"
+ /locus_tag="SARI_00251"
+ /note="PRC-barrel domain; Region: PRC; pfam05239"
+ /db_xref="CDD:218519"
+ gene 244175..244957
+ /locus_tag="SARI_00252"
+ CDS 244175..244957
+ /locus_tag="SARI_00252"
+ /inference="protein motif:BlastProDom:IPR002649"
+ /inference="protein motif:HMMPfam:IPR002649"
+ /inference="protein motif:HMMTigr:IPR002649"
+ /inference="similar to AA sequence:INSD:AAL21563.1"
+ /note="'KEGG: stm:STM2674 6.1e-125 trmD; tRNA
+ (guanine-7-)-methyltransferase K00554;
+ COG: COG0336 tRNA-(guanine-N1)-methyltransferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569340.1"
+ /db_xref="GI:161502228"
+ /db_xref="InterPro:IPR002649"
+ /translation="MFRAITDYGVTGRAVKKGLLNVQSWSPRDFAYDRHRTVDDRPYG
+ GGPGMLMMVQPLRDAIHAAKAAAGEGAKVIYLSPQGRKLDQAGVSELATNQKLILVCG
+ RYEGVDERVIQTEIDEEWSIGDYVLSGGELPAMTLIDSVARFIPGVLGHEASAIEDSF
+ ADGLLDCPHYTRPEVLEGMEVPPVLLSGNHAEIRRWRLKQSLGRTWLRRPELLENLAL
+ TEEQARLLAEFKMEHAQQQQIHESIQDASRRLTLRQHERRSV"
+ misc_feature 244175..244873
+ /locus_tag="SARI_00252"
+ /note="tRNA (guanine-N(1)-)-methyltransferase; Reviewed;
+ Region: trmD; PRK00026"
+ /db_xref="CDD:234581"
+ gene 245017..245364
+ /gene="rplS"
+ /locus_tag="SARI_00253"
+ CDS 245017..245364
+ /gene="rplS"
+ /locus_tag="SARI_00253"
+ /inference="protein motif:BlastProDom:IPR001857"
+ /inference="protein motif:HMMPfam:IPR001857"
+ /inference="protein motif:HMMTigr:IPR001857"
+ /inference="protein motif:ScanRegExp:IPR001857"
+ /inference="similar to AA sequence:INSD:AAX66580.1"
+ /note="this protein is located at the 30S-50S ribosomal
+ subunit interface and may play a role in the structure and
+ function of the aminoacyl-tRNA binding site"
+ /codon_start=1
+ /transl_table=11
+ /product="50S ribosomal protein L19"
+ /protein_id="YP_001569341.1"
+ /db_xref="GI:161502229"
+ /db_xref="InterPro:IPR001857"
+ /translation="MSNIIKQLEQEQMKQNVPSFRPGDTVEVKVWVVEGTKKRLQAFE
+ GVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSIAVKRRGAVRKAKLYYLRE
+ RTGKAARIKERLN"
+ misc_feature 245020..245361
+ /gene="rplS"
+ /locus_tag="SARI_00253"
+ /note="50S ribosomal protein L19; Provisional; Region:
+ rplS; PRK05338"
+ /db_xref="CDD:235418"
+ gene complement(245534..246609)
+ /locus_tag="SARI_00254"
+ /note="Pseudogene compared to gi|16765987|ref|NP_461602.1|
+ putative diguanylate cyclase/phosphodiesterase [Salmonella
+ typhimurium LT2]"
+ /pseudogene="unknown"
+ gene complement(246569..246751)
+ /locus_tag="SARI_00255"
+ CDS complement(246569..246751)
+ /locus_tag="SARI_00255"
+ /inference="similar to AA sequence:INSD:AAV78400.1"
+ /note="'COG: COG2199 FOG: GGDEF domain;
+ Psort location: nuclear, score: 23;
+ ORF located using Blastx'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569342.1"
+ /db_xref="GI:161502230"
+ /translation="MNKEFSLSRPTFKRTLRRISIISVLITMTLIWLLICVASVLTLK
+ QYAQKKSRLNRRHDSP"
+ misc_feature complement(<246605..246751)
+ /locus_tag="SARI_00255"
+ /note="putative inner membrane diguanylate cyclase;
+ Provisional; Region: PRK09966"
+ /db_xref="CDD:182171"
+ gene complement(246744..247268)
+ /locus_tag="SARI_00256"
+ CDS complement(246744..247268)
+ /locus_tag="SARI_00256"
+ /inference="similar to AA sequence:INSD:AAX66579.1"
+ /note="'COG: NOG17158 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569343.1"
+ /db_xref="GI:161502231"
+ /translation="MLMRFSHRFILLFSLLLASLPLYTQRATEEEKSVRAIVSGIISY
+ IPWPTLSGPPGLCIFSSSHVARVFSEEAGGDFPYQPLIIRTTQEALSARCDGFYFGNE
+ SPSYQVELTRHYPVNALLLIAEQNTECIIGRVFCLIINNNEVNFSVNPDSLSHSGMRV
+ NPEVLMLARNQKHE"
+ misc_feature complement(246759..247184)
+ /locus_tag="SARI_00256"
+ /note="Domain of unknown function (DUF4154); Region:
+ DUF4154; pfam13689"
+ /db_xref="CDD:205865"
+ gene 247703..248773
+ /locus_tag="SARI_00257"
+ CDS 247703..248773
+ /locus_tag="SARI_00257"
+ /inference="protein motif:Gene3D:IPR006218"
+ /inference="protein motif:HMMPfam:IPR006218"
+ /inference="protein motif:HMMPIR:IPR006219"
+ /inference="protein motif:HMMTigr:IPR006219"
+ /inference="similar to AA sequence:REFSEQ:NP_755004.1"
+ /note="'catalyzes the formation of
+ 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from
+ phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine
+ sensitive'"
+ /codon_start=1
+ /transl_table=11
+ /product="phospho-2-dehydro-3-deoxyheptonate aldolase"
+ /protein_id="YP_001569344.2"
+ /db_xref="GI:228879507"
+ /db_xref="InterPro:IPR006218"
+ /db_xref="InterPro:IPR006219"
+ /translation="MQKDALNNVRITDEQVLMTPEQLKAAFPLSLAQEAQIAQSRRTI
+ SDIIAGRDPRLLVVCGPCSIHDPETALEYARRFKALAAEVSDSLYLVMRVYFEKPRTT
+ VGWKGLINDPHMDGSFDVEAGLKIARQLLVELVNMGLPLATEALDPNSPQYLGDLFSW
+ SAIGARTTESQTHREMASGLSMPVGFKNGTDGSLATAINAMRAAAQSHRFVGINQAGQ
+ VALLQTQGNPHGHVILRGGKAPNYSPADVAQCEKEMEQAGLRPSLMVDCSHGNSNKDY
+ RRQPAVAESVVAQIKDGNRSIIGLMIESNIHEGNQSSEQPRSEIKYGVSVTDACISWE
+ MTDALLREIHKDLSGQLAVRVA"
+ misc_feature 247703..248758
+ /locus_tag="SARI_00257"
+ /note="phospho-2-dehydro-3-deoxyheptonate aldolase;
+ Provisional; Region: PRK12755"
+ /db_xref="CDD:237190"
+ misc_feature 247835..248725
+ /locus_tag="SARI_00257"
+ /note="DAHP synthetase I family; Region: DAHP_synth_1;
+ pfam00793"
+ /db_xref="CDD:216123"
+ gene 248783..249904
+ /gene="tyrA"
+ /locus_tag="SARI_00258"
+ CDS 248783..249904
+ /gene="tyrA"
+ /locus_tag="SARI_00258"
+ /inference="protein motif:HMMPfam:IPR002701"
+ /inference="protein motif:HMMPfam:IPR003099"
+ /inference="protein motif:HMMPIR:IPR008244"
+ /inference="protein motif:HMMTigr:IPR011277"
+ /inference="protein motif:superfamily:IPR002701"
+ /inference="similar to AA sequence:INSD:CAD05848.1"
+ /note="catalyzes the formation of prephenate from
+ chorismate and the formation of 4-hydroxyphenylpyruvate
+ from prephenate in tyrosine biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="bifunctional chorismate mutase/prephenate
+ dehydrogenase"
+ /protein_id="YP_001569345.1"
+ /db_xref="GI:161502233"
+ /db_xref="InterPro:IPR002701"
+ /db_xref="InterPro:IPR003099"
+ /db_xref="InterPro:IPR008244"
+ /db_xref="InterPro:IPR011277"
+ /translation="MVAELTALRDQIDDVDKALLNLLAKRLELVAEVGEVKSRFGLPI
+ YVPEREASMLASRRAEAEAIGVPPDLIEDVLRRVMRESYSSENDKGFKTLCPSLRPVV
+ IVGGGGQMGRLFEKMLTLSGYQVRILEQQDWPRAGGIVADAGMVIVSVPIHVTEQVIA
+ KLPRLPPDCILVDLASVKSGPLQAMLAVHDGPVLGLHPMFGPDSGSLAKQVVVWCDGR
+ QPEAYQWFLEQIQVWGARLHRISAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQ
+ LLALSSPIYRLELAMVGRLFAQDPQLYADIIMSSKRNLALIKRYYKRFGDAIALLEQG
+ DKQAFIDSFRKVEHWFGDYARRFHNESRVLLRQANDSRQ"
+ misc_feature 248783..249901
+ /gene="tyrA"
+ /locus_tag="SARI_00258"
+ /note="bifunctional chorismate mutase/prephenate
+ dehydrogenase; Provisional; Region: tyrA; PRK11199"
+ /db_xref="CDD:183035"
+ misc_feature 248795..249043
+ /gene="tyrA"
+ /locus_tag="SARI_00258"
+ /note="Chorismate mutase type II; Region: CM_2; cl00693"
+ /db_xref="CDD:242033"
+ misc_feature 249200..249787
+ /gene="tyrA"
+ /locus_tag="SARI_00258"
+ /note="prephenate dehydrogenase; Validated; Region:
+ PRK08507"
+ /db_xref="CDD:181452"
+ gene 249962..250870
+ /locus_tag="SARI_00259"
+ CDS 249962..250870
+ /locus_tag="SARI_00259"
+ /inference="protein motif:HMMPfam:IPR013658"
+ /inference="similar to AA sequence:REFSEQ:YP_217657.1"
+ /note="'KEGG: bme:BMEI1997 2.0e-23 gluconolactonase
+ K01053;
+ COG: COG3386 Gluconolactonase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569346.1"
+ /db_xref="GI:161502234"
+ /db_xref="InterPro:IPR013658"
+ /translation="MTTPHVLFDYVGHLPECPTWSEDEGALYWTDILEKEIHRYHPAS
+ GAHSVLAFPEKVGCFALREQGGFIVAMRNAIWLADKNGLLQCKVCDNPSNPKLARFND
+ GGTDGDGRFYAGTFWAPGDYNGAMLMRIDHDLTAKVIQCDIQGHNGLAFSPDNQWMYT
+ SDTPNGVIYRTSLDKHGEPGKREPFRHFGEGEGLPDGAAMDSEGCYWSAMFDGWRVAR
+ FSPQGEQLEEYRLPVRCPTMVCFGGADMKTLFITTTRENMSAQEVTDYPLSGAIFTLQ
+ VTVAGMKKSRFIERQAGSTGTTFSLG"
+ misc_feature 250001..250726
+ /locus_tag="SARI_00259"
+ /note="SMP-30/Gluconolaconase/LRE-like region; Region:
+ SGL; pfam08450"
+ /db_xref="CDD:219847"
+ gene complement(250831..251991)
+ /gene="pheA"
+ /locus_tag="SARI_00260"
+ CDS complement(250831..251991)
+ /gene="pheA"
+ /locus_tag="SARI_00260"
+ /inference="protein motif:HMMPfam:IPR001086"
+ /inference="protein motif:HMMPfam:IPR002701"
+ /inference="protein motif:HMMPIR:IPR008242"
+ /inference="protein motif:HMMTigr:IPR010952"
+ /inference="protein motif:ScanRegExp:IPR001086"
+ /inference="protein motif:superfamily:IPR002701"
+ /inference="similar to AA sequence:INSD:AAX66575.1"
+ /note="catalyzing the formation of prephenate from
+ chorismate and the formation of phenylpyruvate from
+ prephenate in phenylalanine biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="bifunctional chorismate mutase/prephenate
+ dehydratase"
+ /protein_id="YP_001569347.1"
+ /db_xref="GI:161502235"
+ /db_xref="InterPro:IPR001086"
+ /db_xref="InterPro:IPR002701"
+ /db_xref="InterPro:IPR008242"
+ /db_xref="InterPro:IPR010952"
+ /translation="MTSENPLLALRDKISALDEELLVLLAKRRALAIEVGQAKLLSHR
+ PVRDIDRERALLDRLIHLGKAHHLDAHYITRLFQLIIEDSVLTQQALLQQHLNNTHPH
+ SARIAFLGPKGSYSHLAARQYAARHFEQFIESGCAKFADIFHQVETGQADYAVVPIEN
+ TSSGAINDVYDLLQHTSLSIVGEMTVTIDHCILVSGATDLNTIETVYSHPQPFQQCSK
+ FLSRYPHWKIDYTESTSAAMEKVAQANSPRVAALGSEAGGTLHGLQVLERIAANQTQN
+ ITRFLVLARKAINVSDQVPAKTTLLIATGQQAGALVEALLVLRNHNLIMTKLESRPIH
+ GNPWEEMFYLDIQANLESQVMQNSLKELGEITRSMKVLGCYPSENVVPVEPA"
+ misc_feature complement(250834..251991)
+ /gene="pheA"
+ /locus_tag="SARI_00260"
+ /note="bifunctional chorismate mutase/prephenate
+ dehydratase; Provisional; Region: pheA; PRK10622"
+ /db_xref="CDD:182594"
+ misc_feature complement(251725..251973)
+ /gene="pheA"
+ /locus_tag="SARI_00260"
+ /note="chorismate mutase domain of proteobacterial
+ P-protein, clade 1; Region: CM_P_1; TIGR01797"
+ /db_xref="CDD:130856"
+ misc_feature complement(251128..251676)
+ /gene="pheA"
+ /locus_tag="SARI_00260"
+ /note="Prephenate dehydratase; Region: PDT; pfam00800"
+ /db_xref="CDD:216127"
+ misc_feature complement(250864..251103)
+ /gene="pheA"
+ /locus_tag="SARI_00260"
+ /note="C-terminal ACT domain of the bifunctional
+ chorismate mutase-prephenate dehydratase (CM-PDT) enzyme
+ and the prephenate dehydratase (PDT) enzyme; Region:
+ ACT_CM-PDT; cd04905"
+ /db_xref="CDD:153177"
+ misc_feature complement(order(250996..251007,251056..251067))
+ /gene="pheA"
+ /locus_tag="SARI_00260"
+ /note="putative L-Phe binding site [chemical binding];
+ other site"
+ /db_xref="CDD:153177"
+ gene 252714..253367
+ /locus_tag="SARI_00261"
+ CDS 252714..253367
+ /locus_tag="SARI_00261"
+ /inference="similar to AA sequence:REFSEQ:NP_288436.1"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569348.1"
+ /db_xref="GI:161502236"
+ /translation="MNIIKNCFSFLNSMLGMSGRSYAVSEGHIASKLGSKIVNVKNGS
+ AELLTYRSADLSKERVITQEILSRLDIRENFVAVRIQEDKFTDLKNKTIQGHKETVAK
+ VRDWYNPYQNYLGISMGRVELSSDIAKKECRNAMNVMLMERNDFNNKILNSDNLQKQY
+ GGNGDKSWVVAPLKELLDKGAKVYPDETCSLRLGQPFIITLPETTKVNVDIYPVNKK"
+ gene complement(253855..254193)
+ /locus_tag="SARI_00262"
+ CDS complement(253855..254193)
+ /locus_tag="SARI_00262"
+ /inference="protein motif:HMMPfam:IPR003489"
+ /inference="protein motif:HMMTigr:IPR003489"
+ /inference="similar to AA sequence:INSD:AAX66574.1"
+ /note="associated with 30S ribosomal subunit; interferes
+ with translation elongation"
+ /codon_start=1
+ /transl_table=11
+ /product="translation inhibitor protein RaiA"
+ /protein_id="YP_001569349.2"
+ /db_xref="GI:448236185"
+ /db_xref="InterPro:IPR003489"
+ /translation="MTMNITSKQMEITPAIRQHVADRLAKLEKWQTHLINPHIILSKE
+ PQGFIADATINTPNGHLVASAKHEDMYTAINELINKLERQLNKVQHKGEARRATASVK
+ DASFVEAEEE"
+ misc_feature complement(253921..254184)
+ /locus_tag="SARI_00262"
+ /note="RaiA ("ribosome-associated inhibitor A",
+ also known as Protein Y (PY), YfiA, and SpotY, is a
+ stress-response protein that binds the ribosomal subunit
+ interface and arrests translation by interfering with
+ aminoacyl-tRNA binding to the ribosomal...; Region: RaiA;
+ cd00552"
+ /db_xref="CDD:238308"
+ misc_feature complement(order(253921..253923,253933..253938,
+ 253978..253980,253987..253989,253993..253995,
+ 254002..254004,254008..254010,254017..254028,
+ 254035..254037,254062..254064,254074..254076,
+ 254086..254091,254107..254109,254116..254118,
+ 254170..254172,254176..254178,254182..254184))
+ /locus_tag="SARI_00262"
+ /note="30S subunit binding site; other site"
+ /db_xref="CDD:238308"
+ gene complement(254465..255202)
+ /locus_tag="SARI_00263"
+ CDS complement(254465..255202)
+ /locus_tag="SARI_00263"
+ /inference="protein motif:Gene3D:IPR011990"
+ /inference="similar to AA sequence:REFSEQ:YP_151705.1"
+ /note="'with YaeT, NlpB and YfgL forms a complex involved
+ in the proper assembly and/or targeting of OMPs to the
+ outer membrane; involved in resistance to ampicillin and
+ tetracycline'"
+ /codon_start=1
+ /transl_table=11
+ /product="outer membrane protein assembly complex subunit
+ YfiO"
+ /protein_id="YP_001569350.1"
+ /db_xref="GI:161502238"
+ /db_xref="InterPro:IPR011990"
+ /translation="MTRMKYLVAAATLSLFLAGCSGSKEEVPDNPPNEIYATAQQKLQ
+ DGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTH
+ PNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPNSQYT
+ TDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRDALPLM
+ ENAYRQMQLNAQADKVAKIIAANSKNT"
+ misc_feature complement(254474..255202)
+ /locus_tag="SARI_00263"
+ /note="outer membrane biogenesis protein BamD;
+ Provisional; Region: PRK10866"
+ /db_xref="CDD:182792"
+ misc_feature complement(<255098..255202)
+ /locus_tag="SARI_00263"
+ /note="Protein of unknown function (DUF3897); Region:
+ DUF3897; cl17494"
+ /db_xref="CDD:248048"
+ gene 255334..256290
+ /locus_tag="SARI_00264"
+ CDS 255334..256290
+ /locus_tag="SARI_00264"
+ /inference="protein motif:BlastProDom:IPR006145"
+ /inference="protein motif:HMMPfam:IPR002942"
+ /inference="protein motif:HMMPfam:IPR006145"
+ /inference="protein motif:HMMSmart:IPR002942"
+ /inference="protein motif:HMMTigr:IPR006225"
+ /inference="protein motif:ScanRegExp:IPR006224"
+ /inference="similar to AA sequence:SwissProt:P65837"
+ /note="'KEGG: sty:STY2851 3.8e-139 sfhB, rluD; ftsH
+ suppressor protein SfhB K06180;
+ COG: COG0564 Pseudouridylate synthases, 23S RNA-specific;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569351.1"
+ /db_xref="GI:161502239"
+ /db_xref="InterPro:IPR002942"
+ /db_xref="InterPro:IPR006145"
+ /db_xref="InterPro:IPR006224"
+ /db_xref="InterPro:IPR006225"
+ /translation="MAQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILNQR
+ VLVNGQLCDKPKEKVLGGERVAIDAEIDEEIRFEAQDIPLDIVYEDDDILVINKPRDL
+ VVHPGAGNPDGTVLNALLHYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVE
+ SLQLREITREYEAVAIGHMTAGGTVNEPISRHPTKRTHMSVHPMGKPAVTHYRIMEHF
+ RVHTRLRLRLETGRTHQIRVHMAHITHPLVGDQVYGGRPRPPKAHRKRLFPRCVSSTA
+ SASCNDAASLPSCIGYRNGVARADSTGYGGPYRCDARRFRRT"
+ misc_feature 255349..256137
+ /locus_tag="SARI_00264"
+ /note="Pseudouridylate synthases, 23S RNA-specific
+ [Translation, ribosomal structure and biogenesis]; Region:
+ RluA; COG0564"
+ /db_xref="CDD:223638"
+ misc_feature 255385..255624
+ /locus_tag="SARI_00264"
+ /note="S4/Hsp/ tRNA synthetase RNA-binding domain; The
+ domain surface is populated by conserved, charged residues
+ that define a likely RNA-binding site; Found in stress
+ proteins, ribosomal proteins and tRNA synthetases; This
+ may imply a hitherto unrecognized...; Region: S4; cd00165"
+ /db_xref="CDD:238095"
+ misc_feature order(255388..255390,255424..255429,255433..255438,
+ 255442..255447,255454..255459,255463..255465,
+ 255484..255507,255511..255513)
+ /locus_tag="SARI_00264"
+ /note="RNA binding surface [nucleotide binding]; other
+ site"
+ /db_xref="CDD:238095"
+ misc_feature 255610..256137
+ /locus_tag="SARI_00264"
+ /note="Pseudouridine synthase, RsuA/RluD family; Region:
+ PseudoU_synth_RluCD_like; cd02869"
+ /db_xref="CDD:211346"
+ misc_feature order(255739..255750,256042..256044)
+ /locus_tag="SARI_00264"
+ /note="active site"
+ /db_xref="CDD:211346"
+ gene 256309..257040
+ /locus_tag="SARI_00265"
+ CDS 256309..257040
+ /locus_tag="SARI_00265"
+ /inference="protein motif:HMMPfam:IPR003730"
+ /inference="protein motif:HMMTigr:IPR003730"
+ /inference="protein motif:superfamily:IPR009030"
+ /inference="similar to AA sequence:REFSEQ:YP_151703.1"
+ /note="'COG: COG1496 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569352.1"
+ /db_xref="GI:161502240"
+ /db_xref="InterPro:IPR003730"
+ /db_xref="InterPro:IPR009030"
+ /translation="MNVLIVPQWPLPKGVAACSSTRIGGMSLPPYDSLNLGAHCGDNP
+ AHVEENRKRLFAEGNLPSKPVWLEQVHGKNVLRLTGEPYASKRADASYSNTPGTVCAV
+ MTADCLPVLFCNREGTEVAAAHAGWRGLCEGVLEETVACFADKPENIIAWLGPAIGPA
+ AFEVGPEVRDAFLVKDAQADSAFLAHGEKFLANIYQLARQRLANTGVAHVYGGDRCTF
+ SESETFFSYRRDKTTGRMASFIWLI"
+ misc_feature 256309..257037
+ /locus_tag="SARI_00265"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10723"
+ /db_xref="CDD:182677"
+ misc_feature 256318..257037
+ /locus_tag="SARI_00265"
+ /note="Multicopper polyphenol oxidase (laccase) [Secondary
+ metabolites biosynthesis, transport and catabolism];
+ Region: yfiH; COG1496"
+ /db_xref="CDD:224413"
+ gene 257158..259743
+ /locus_tag="SARI_00266"
+ CDS 257158..259743
+ /locus_tag="SARI_00266"
+ /inference="protein motif:HMMPfam:IPR003959"
+ /inference="protein motif:HMMPfam:IPR004176"
+ /inference="protein motif:HMMPfam:IPR013093"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR001270"
+ /note="'KEGG: eci:UTI89_C2925 0. clpB; heat shock protein
+ K03695;
+ COG: COG0542 ATPases with chaperone activity, ATP-binding
+ subunit;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="protein disaggregation chaperone"
+ /protein_id="YP_001569353.1"
+ /db_xref="GI:161502241"
+ /db_xref="InterPro:IPR001270"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR003959"
+ /db_xref="InterPro:IPR004176"
+ /db_xref="InterPro:IPR013093"
+ /translation="MGGVMRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLN
+ QEGGSVRPLLTSAGINAGQLRTAIDQALSRLPQVEGTGGDVQPSSELVRVLNLCDKLA
+ QKRGDNFISSELFVLAALESRGTLTDLLKSAGATTANITQAIEQMRGGESVNDQGAED
+ QRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA
+ IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGN
+ VILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALE
+ RRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPD
+ KAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNE
+ ELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG
+ KIPELEKQLEAATQSEGKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRM
+ EQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALAN
+ FMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE
+ VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGR
+ MKEMVLGVVGHNFRPEFINRIDEVVVFHPLGEQHIAAIAQIQLQRLYKRLEERGYEIH
+ ISDEALKLLSANGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEASDDR
+ IVAVQ"
+ misc_feature 257170..259740
+ /locus_tag="SARI_00266"
+ /note="protein disaggregation chaperone; Provisional;
+ Region: PRK10865"
+ /db_xref="CDD:182791"
+ misc_feature 257239..257376
+ /locus_tag="SARI_00266"
+ /note="Clp amino terminal domain; Region: Clp_N;
+ pfam02861"
+ /db_xref="CDD:217254"
+ misc_feature 257449..257604
+ /locus_tag="SARI_00266"
+ /note="Clp amino terminal domain; Region: Clp_N;
+ pfam02861"
+ /db_xref="CDD:217254"
+ misc_feature 257710..258192
+ /locus_tag="SARI_00266"
+ /note="The AAA+ (ATPases Associated with a wide variety of
+ cellular Activities) superfamily represents an ancient
+ group of ATPases belonging to the ASCE (for additional
+ strand, catalytic E) division of the P-loop NTPase fold.
+ The ASCE division also includes ABC; Region: AAA; cd00009"
+ /db_xref="CDD:99707"
+ misc_feature 257785..257808
+ /locus_tag="SARI_00266"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature order(257788..257811,258001..258003,258112..258114)
+ /locus_tag="SARI_00266"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:99707"
+ misc_feature 257989..258006
+ /locus_tag="SARI_00266"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature 258163..258165
+ /locus_tag="SARI_00266"
+ /note="arginine finger; other site"
+ /db_xref="CDD:99707"
+ misc_feature 258880..259464
+ /locus_tag="SARI_00266"
+ /note="The AAA+ (ATPases Associated with a wide variety of
+ cellular Activities) superfamily represents an ancient
+ group of ATPases belonging to the ASCE (for additional
+ strand, catalytic E) division of the P-loop NTPase fold.
+ The ASCE division also includes ABC; Region: AAA; cd00009"
+ /db_xref="CDD:99707"
+ misc_feature 258982..259005
+ /locus_tag="SARI_00266"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature order(258985..259008,259198..259200,259324..259326)
+ /locus_tag="SARI_00266"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:99707"
+ misc_feature 259186..259203
+ /locus_tag="SARI_00266"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature 259435..259437
+ /locus_tag="SARI_00266"
+ /note="arginine finger; other site"
+ /db_xref="CDD:99707"
+ misc_feature 259504..259707
+ /locus_tag="SARI_00266"
+ /note="C-terminal, D2-small domain, of ClpB protein;
+ Region: ClpB_D2-small; pfam10431"
+ /db_xref="CDD:204486"
+ unsure 257356..257399
+ /locus_tag="SARI_00266"
+ /note="Sequence derived from one plasmid subclone"
+ unsure 259165..259622
+ /locus_tag="SARI_00266"
+ /note="Sequence derived from one plasmid subclone"
+ gene 260199..261745
+ /locus_tag="SARI_00267"
+ rRNA 260199..261745
+ /locus_tag="SARI_00267"
+ /product="16S ribosomal RNA"
+ /inference="nucleotide motif:Rfam:RF00177"
+ /note="Rfam score 351.93;
+ 5 domain"
+ unsure 260591..260610
+ /locus_tag="SARI_00267"
+ /note="Sequence derived from one plasmid subclone"
+ gene 261826..261898
+ /locus_tag="SARI_00268"
+ tRNA 261826..261898
+ /locus_tag="SARI_00268"
+ /product="tRNA-Glu"
+ gene 262085..265191
+ /locus_tag="SARI_04703"
+ rRNA 262085..265191
+ /locus_tag="SARI_04703"
+ /product="23S ribosomal RNA"
+ gene 265377..265492
+ /locus_tag="SARI_00269"
+ rRNA 265377..265492
+ /locus_tag="SARI_00269"
+ /product="5S ribosomal RNA"
+ /inference="nucleotide motif:Rfam:RF00001"
+ /note="Rfam score 84.4"
+ gene 265780..266235
+ /locus_tag="SARI_00270"
+ CDS 265780..266235
+ /locus_tag="SARI_00270"
+ /inference="protein motif:superfamily:IPR008979"
+ /inference="similar to AA sequence:INSD:AAV76285.1"
+ /note="'COG: NOG09993 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569354.1"
+ /db_xref="GI:161502242"
+ /db_xref="InterPro:IPR008979"
+ /translation="MAIKSFNYQQDFSSIDFRQQPDLYQVGRGEQGVLLVEPYKSEIL
+ PFWRYKDEASAIKSAEQIYQLFEAYRQQDDFVGMDMARKFIQMGYTRARRYANYKGGR
+ KYAEDGSLNTRGNDPTKAAAATVFKGWWDKIRQDEDYLKRKRQHQARWG"
+ misc_feature 265795..266229
+ /locus_tag="SARI_00270"
+ /note="Domain of unknown function (DUF4385); Region:
+ DUF4385; pfam14328"
+ /db_xref="CDD:222684"
+ gene 266339..267640
+ /locus_tag="SARI_00271"
+ CDS 266339..267640
+ /locus_tag="SARI_00271"
+ /inference="protein motif:HMMPfam:IPR005828"
+ /inference="protein motif:HMMTigr:IPR004736"
+ /inference="protein motif:ScanRegExp:IPR005829"
+ /inference="similar to AA sequence:REFSEQ:YP_149598.1"
+ /note="'COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="alpha-ketoglutarate transporter"
+ /protein_id="YP_001569355.1"
+ /db_xref="GI:161502243"
+ /db_xref="InterPro:IPR004736"
+ /db_xref="InterPro:IPR005828"
+ /db_xref="InterPro:IPR005829"
+ /translation="MAEIIQRIDKNNAEAPEIRRRVWAIVGASSGNLVEWFDFYAYSF
+ CSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADRRGRKASMLISVC
+ MMCLGSLVIACLPGYDTIGIWAPALLLIARLFQGLSVGGEYGTSATYMSEVALDGLKG
+ FFASFQYVTLIGGQLLALLVVVLLQQVLEDAELRAWGWRIPFALGAVLAVVALWLRRQ
+ LDETSKHETRALKEAGSLKGLWRNRKAFLMVLGFTAAGSLCFYTFTTYMQKYLVNTAG
+ MHANVASGIMTVALCVFMLVQPLFGALSDKIGRRTSMLCFGALATLFTVPILSALQNV
+ TSPYVAFALVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEY
+ VALSLKSFGMENSFFWYVTAMAVLAFLVSLMLHRKGKGLRL"
+ misc_feature 266339..267637
+ /locus_tag="SARI_00271"
+ /note="alpha-ketoglutarate transporter; Provisional;
+ Region: PRK10406"
+ /db_xref="CDD:182433"
+ misc_feature 266411..267610
+ /locus_tag="SARI_00271"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature order(266453..266455,266462..266470,266474..266479,
+ 266546..266548,266555..266560,266567..266569,
+ 266579..266584,266588..266593,266753..266758,
+ 266765..266770,266777..266782,266789..266791,
+ 266825..266830,266837..266842,266858..266860,
+ 267107..267109,267116..267121,267128..267133,
+ 267140..267142,267182..267184,267194..267196,
+ 267206..267208,267215..267217,267227..267229,
+ 267380..267382,267389..267394,267401..267403,
+ 267413..267418,267425..267427,267458..267463,
+ 267470..267475,267485..267490,267497..267499)
+ /locus_tag="SARI_00271"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene complement(267637..267960)
+ /locus_tag="SARI_00272"
+ CDS complement(267637..267960)
+ /locus_tag="SARI_00272"
+ /inference="similar to AA sequence:REFSEQ:NP_457128.1"
+ /note="'COG: COG5544 Predicted periplasmic lipoprotein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569356.2"
+ /db_xref="GI:448236186"
+ /translation="MRILIPFTVLFLSGCSHLANDSWSGQDKAQHFMASAMLSAAGNE
+ YARHQGVNPDRSAAIGLMFSLSLGASKELWDSRPEGSGWSWKDFAWDVAGATTGYAIW
+ QMAQH"
+ misc_feature complement(267646..267960)
+ /locus_tag="SARI_00272"
+ /note="lipoprotein; Provisional; Region: PRK10759"
+ /db_xref="CDD:182705"
+ gene complement(268005..269360)
+ /gene="pssA"
+ /locus_tag="SARI_00273"
+ CDS complement(268005..269360)
+ /gene="pssA"
+ /locus_tag="SARI_00273"
+ /inference="protein motif:HMMPfam:IPR001736"
+ /inference="protein motif:HMMSmart:IPR001736"
+ /inference="similar to AA sequence:INSD:AAL21546.1"
+ /note="catalyzes de novo synthesis of phosphatidylserine
+ from CDP-diacylglycerol and L-serine which leads
+ eventually to the production of phosphatidylethanolamine;
+ bounds to the ribosome"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphatidylserine synthase"
+ /protein_id="YP_001569357.1"
+ /db_xref="GI:161502245"
+ /db_xref="InterPro:IPR001736"
+ /translation="MLSKFKRNKHQQHLAQLPKISQSVDDVDFFYTPATFRETLLEKI
+ ASATQRICIVALYLEQDDGGKGILDALYAAKRQRPELDVRVLVDWHRAQRGRIGAAAS
+ NTNADWYCRLAQENPDIEVPVYGVPINTREALGVLHFKGFIIDDSVLYSGASLNDVYL
+ HQHDKYRYDRYQLIRNRQMADIMFDWVTRNLMNGRGVNRLDNTLRPKSPEIKNDIRLY
+ RQELREASYHFQGDANDEQLSVTPLVGLGKSSLLNKTIFHLMPCAEHKLTICTPYFNL
+ PAVLVRNIIQLLRDGKKVEIIVGDKTANDFYIPEDEPFKIIGALPYLYEINLRRFLSR
+ LQYYVNTDQLVVRLWKDDDNTYHLKGMWVDDKWMLLTGNNLNPRAWRLDLENAILIHD
+ PKQELAPQREKELELIRTHTTIVKHYRDLQSIADYPVKVRKLIRRLRRIRIDRLISRI
+ L"
+ misc_feature complement(268068..269360)
+ /gene="pssA"
+ /locus_tag="SARI_00273"
+ /note="phosphatidylserine synthase; Provisional; Region:
+ pssA; PRK09428"
+ /db_xref="CDD:236510"
+ misc_feature complement(268791..269312)
+ /gene="pssA"
+ /locus_tag="SARI_00273"
+ /note="Catalytic domain, repeat 1, of phosphatidylserine
+ synthases from gram-negative bacteria; Region:
+ PLDc_PSS_G_neg_1; cd09134"
+ /db_xref="CDD:197232"
+ misc_feature complement(order(268791..268793,268803..268805,
+ 268812..268817,268827..268829,268839..268841,
+ 268845..268847,268851..268865,268905..268907,
+ 268911..268913,268941..268961,268971..268985,
+ 269274..269276,269280..269282))
+ /gene="pssA"
+ /locus_tag="SARI_00273"
+ /note="domain interface [polypeptide binding]; other site"
+ /db_xref="CDD:197232"
+ misc_feature complement(order(268854..268856,268899..268901,
+ 268905..268907,268941..268943,268947..268949))
+ /gene="pssA"
+ /locus_tag="SARI_00273"
+ /note="putative active site [active]"
+ /db_xref="CDD:197232"
+ misc_feature complement(268947..268949)
+ /gene="pssA"
+ /locus_tag="SARI_00273"
+ /note="catalytic site [active]"
+ /db_xref="CDD:197232"
+ misc_feature complement(268068..268649)
+ /gene="pssA"
+ /locus_tag="SARI_00273"
+ /note="Catalytic domain, repeat 2, of phosphatidylserine
+ synthases from gram-negative bacteria; Region:
+ PLDc_PSS_G_neg_2; cd09136"
+ /db_xref="CDD:197234"
+ misc_feature complement(order(268137..268142,268149..268151,
+ 268161..268163,268170..268172,268188..268190,
+ 268194..268217,268227..268229,268245..268256,
+ 268287..268301,268623..268625,268629..268649))
+ /gene="pssA"
+ /locus_tag="SARI_00273"
+ /note="domain interface [polypeptide binding]; other site"
+ /db_xref="CDD:197234"
+ misc_feature complement(order(268206..268208,268239..268241,
+ 268245..268247,268284..268286,268290..268292))
+ /gene="pssA"
+ /locus_tag="SARI_00273"
+ /note="putative active site [active]"
+ /db_xref="CDD:197234"
+ misc_feature complement(268290..268292)
+ /gene="pssA"
+ /locus_tag="SARI_00273"
+ /note="catalytic site [active]"
+ /db_xref="CDD:197234"
+ gene complement(269475..272135)
+ /locus_tag="SARI_00274"
+ CDS complement(269475..272135)
+ /locus_tag="SARI_00274"
+ /inference="protein motif:Gene3D:IPR013816"
+ /inference="protein motif:HMMPfam:IPR000182"
+ /inference="protein motif:HMMPfam:IPR003781"
+ /note="'KEGG: eci:UTI89_C2907 0. yfiQ; hypothetical
+ protein YfiQ K09181;
+ COG: COG1042 Acyl-CoA synthetase (NDP forming);
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569358.1"
+ /db_xref="GI:161502246"
+ /db_xref="InterPro:IPR000182"
+ /db_xref="InterPro:IPR003781"
+ /db_xref="InterPro:IPR013816"
+ /translation="MSQQGLEALLRPKSIAVIGASMKPHRAGYLMMRNLLAGGFNGPV
+ LPVTPAWKAVLGVMAWPDIASLPFTPDLAILCTNASRNLALLDALGANGCKTCIILSA
+ PTSQHEELLACARRHKMRLLGPNSLGLLAPWLGLNASFSPVPIKQGKLAFISQSAAVS
+ NTILDWAQQREMGFSYFIALGDSLDIDVDELLDYLARDSKTSAILLYLEQLSDARRFV
+ SAARSASRNKPILVIKSGRSPAAQRLLNTSAGMDPAWDAAIQRAGLLRVQDTHELFSA
+ VETLSHMRPLRGDRLMIISNGAAPAALALDELWSRNGKLATLSEETCLQLRQALPAHI
+ DIANPLDLCDDASSEHYVKTLDILLASQDFDALMVIHSPSAAAPGTESAHALIETIKR
+ HPRGRFVTLLTNWCGEFSSQEARRLFSEAGLPTYRTPEGTITAFMHMVEYRRNQKQLR
+ ETPALPSNLTSNTAEAHNLLQQAIAEGATSLDTHEVQPILHAYGLHTLPTWIAGDSAE
+ AVHIAEQIGYPVALKLRSPDIPHKSDVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA
+ RIHGLLVQSMANRAGAQELRVVVEHDPVFGPLIMLGEGGVEWRPEEQAVVALPPLNMN
+ LARYLVIQGIKQRKIRARSALHPLDIVGLSQLLVQVSNLIVDCPEIQRLDIHPLLASA
+ SEFTALDVTLDIAPFDGDSESRLAVRPYPHQLEEWVEMKNGDRCLFRPILPEDEPQLR
+ QFIAQVTKEDLYYRYFSEINEFTHEDLANMTQIDYDREMAFVAVRRLDNTEEILGVTR
+ AISDPDNIDAEFAVLVRSDLKGLGLGRRLMEKLIAYTRDHGLRRLNGITMPNNRSMVA
+ LARKLGFQVDIQLEEGIVGLTLNLAQCDES"
+ misc_feature complement(270261..272129)
+ /locus_tag="SARI_00274"
+ /note="Acyl-CoA synthetase (NDP forming) [Energy
+ production and conversion]; Region: COG1042"
+ /db_xref="CDD:223972"
+ misc_feature complement(271746..272099)
+ /locus_tag="SARI_00274"
+ /note="CoA binding domain; Region: CoA_binding_2;
+ pfam13380"
+ /db_xref="CDD:222088"
+ misc_feature complement(271296..271694)
+ /locus_tag="SARI_00274"
+ /note="Succinyl-CoA ligase like flavodoxin domain; Region:
+ Succ_CoA_lig; pfam13607"
+ /db_xref="CDD:205785"
+ misc_feature complement(270054..270722)
+ /locus_tag="SARI_00274"
+ /note="ATP-grasp domain; Region: ATP-grasp_5; pfam13549"
+ /db_xref="CDD:222215"
+ misc_feature complement(269544..269963)
+ /locus_tag="SARI_00274"
+ /note="Acetyltransferase (GNAT) domain; Region:
+ Acetyltransf_3; pfam13302"
+ /db_xref="CDD:222034"
+ misc_feature complement(269607..269777)
+ /locus_tag="SARI_00274"
+ /note="N-Acyltransferase superfamily: Various enzymes that
+ characteristically catalyze the transfer of an acyl group
+ to a substrate; Region: NAT_SF; cd04301"
+ /db_xref="CDD:173926"
+ misc_feature complement(order(269661..269666,269694..269702))
+ /locus_tag="SARI_00274"
+ /note="Coenzyme A binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:173926"
+ gene complement(272171..272869)
+ /locus_tag="SARI_00275"
+ CDS complement(272171..272869)
+ /locus_tag="SARI_00275"
+ /inference="protein motif:HMMPfam:IPR005636"
+ /inference="similar to AA sequence:REFSEQ:YP_149602.1"
+ /note="'COG: COG3148 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569359.2"
+ /db_xref="GI:448236187"
+ /db_xref="InterPro:IPR005636"
+ /translation="MNKNAVLQLRAERLARATRPFLARGNRVHRCQRCLLPLKLCLCD
+ TLTPAQAKSRFCLIMFDTEPLKPSNTGRLIADILPDTAAFQWSRTEPPQALLELVQHP
+ DYQPIVVFPASYAGEAREVIFTPPAGKPPLFIMLDGTWPEARKMFRKSPYLDHLPIIS
+ VDLSRLSAYRLREIHAEGQYCTAEVAIALLDMAGDTEAAVGLGEHFTRFKTRYLAGKT
+ QHPGNITAENSESV"
+ misc_feature complement(272174..272860)
+ /locus_tag="SARI_00275"
+ /note="Uncharacterized conserved protein [Function
+ unknown]; Region: COG3148"
+ /db_xref="CDD:225690"
+ gene complement(272940..273359)
+ /locus_tag="SARI_00276"
+ CDS complement(272940..273359)
+ /locus_tag="SARI_00276"
+ /inference="protein motif:FPrintScan:IPR006662"
+ /inference="protein motif:Gene3D:IPR012335"
+ /inference="protein motif:HMMPfam:IPR013766"
+ /inference="protein motif:HMMTigr:IPR005746"
+ /inference="protein motif:ScanRegExp:IPR006662"
+ /inference="protein motif:superfamily:IPR012336"
+ /inference="similar to AA sequence:REFSEQ:NP_461584.1"
+ /note="'KEGG: stm:STM2649 1.4e-72 trxC; THIoredoxin 2,
+ redox factor K03672;
+ COG: COG0526 Thiol-disulfide isomerase and THIoredoxins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="thioredoxin 2"
+ /protein_id="YP_001569360.1"
+ /db_xref="GI:161502248"
+ /db_xref="InterPro:IPR005746"
+ /db_xref="InterPro:IPR006662"
+ /db_xref="InterPro:IPR012335"
+ /db_xref="InterPro:IPR012336"
+ /db_xref="InterPro:IPR013766"
+ /translation="MNTVCTHCQAINRIPDDRLQDAAKCGRCGHELFDGEVINATSET
+ LDKLLKDDLPVVIDFWAPWCGPCRNFAPIFKDVAEERSGKVRFVKVDTEAERELSARF
+ GIRSIPTIMIFKHGQVVDMLNGAVPKAPFDNWLNEAL"
+ misc_feature complement(272943..273359)
+ /locus_tag="SARI_00276"
+ /note="thioredoxin 2; Provisional; Region: PRK10996"
+ /db_xref="CDD:182889"
+ misc_feature complement(273270..273359)
+ /locus_tag="SARI_00276"
+ /note="zinc-ribbon domain; Region: zinc_ribbon_5; cl11777"
+ /db_xref="CDD:209383"
+ misc_feature complement(272952..273200)
+ /locus_tag="SARI_00276"
+ /note="TRX family; composed of two groups: Group I, which
+ includes proteins that exclusively encode a TRX domain;
+ and Group II, which are composed of fusion proteins of TRX
+ and additional domains. Group I TRX is a small ancient
+ protein that alter the redox...; Region: TRX_family;
+ cd02947"
+ /db_xref="CDD:239245"
+ misc_feature complement(order(273159..273161,273168..273170))
+ /locus_tag="SARI_00276"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:239245"
+ gene 273563..274600
+ /locus_tag="SARI_00277"
+ CDS 273563..274600
+ /locus_tag="SARI_00277"
+ /inference="protein motif:BlastProDom:IPR001537"
+ /inference="protein motif:HMMPfam:IPR001537"
+ /inference="protein motif:HMMPfam:IPR013123"
+ /inference="similar to AA sequence:INSD:CAD05832.1"
+ /note="'KEGG: stt:t0262 1.1e-182 yfiF; putative RNA
+ methyltransferase K03214;
+ COG: COG0566 rRNA methylases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative methyltransferase"
+ /protein_id="YP_001569361.1"
+ /db_xref="GI:161502249"
+ /db_xref="InterPro:IPR001537"
+ /db_xref="InterPro:IPR013123"
+ /translation="MNDELKNKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPTKSRT
+ DGGRRPARDERNNQSRDRKHETSPWRTVSRAPGDETAEKVDHGGISGKSFIDPEILRR
+ QRAEETRVYGENACQALFQSRPDAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEA
+ ELAKVSGTEHHGGVCFLIKKRNGMTVKQWVKQAADQDCVLALEDIANPHNLGGMMRSC
+ AHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITGESIVDVLDDFRQAGYTVVTTS
+ SDRGQALFGATLPEKMVLVLGREYDFLPEAAREPDDLCVKINGTGNVESLNVSVATGV
+ LLAEWWRQNKA"
+ misc_feature 273563..274597
+ /locus_tag="SARI_00277"
+ /note="putative methyltransferase; Provisional; Region:
+ PRK10864"
+ /db_xref="CDD:236779"
+ misc_feature 273890..274102
+ /locus_tag="SARI_00277"
+ /note="RNA 2'-O ribose methyltransferase substrate
+ binding; Region: SpoU_sub_bind; pfam08032"
+ /db_xref="CDD:203842"
+ misc_feature 274157..274570
+ /locus_tag="SARI_00277"
+ /note="SpoU rRNA Methylase family; Region: SpoU_methylase;
+ pfam00588"
+ /db_xref="CDD:216010"
+ gene complement(274719..275408)
+ /locus_tag="SARI_00278"
+ CDS complement(274719..275408)
+ /locus_tag="SARI_00278"
+ /inference="protein motif:BlastProDom:IPR003249"
+ /inference="protein motif:HMMPfam:IPR005122"
+ /inference="protein motif:HMMTigr:IPR002043"
+ /inference="protein motif:ScanRegExp:IPR002043"
+ /inference="similar to AA sequence:INSD:AAV76293.1"
+ /note="Excises uracil residues from the DNA which can
+ arise as a result of misincorporation of dUMP residues by
+ DNA polymerase or due to deamination of cytosine"
+ /codon_start=1
+ /transl_table=11
+ /product="uracil-DNA glycosylase"
+ /protein_id="YP_001569362.1"
+ /db_xref="GI:161502250"
+ /db_xref="InterPro:IPR002043"
+ /db_xref="InterPro:IPR003249"
+ /db_xref="InterPro:IPR005122"
+ /translation="MATELTWHDVLADEKQQPYFINTLHTVAGERQSGITVYPPQKDV
+ FNAFRFTELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIAPPPSLVNMYKELEASIPG
+ FVRPPHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLINQYREGVV
+ FLLWGSHAQKKGAIIDPLRHHILKAPHPSPLSAHRGFFGCNHFALTNQWLEQHGEKPI
+ DWTPVLPAESE"
+ misc_feature complement(274749..275357)
+ /locus_tag="SARI_00278"
+ /note="Family 1 of Uracil-DNA glycosylase (UDG) enzymes;
+ Region: UDG_F1; cd10027"
+ /db_xref="CDD:198425"
+ misc_feature complement(order(274848..274850,275040..275042,
+ 275145..275147,275178..275183,275211..275225))
+ /locus_tag="SARI_00278"
+ /note="ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:198425"
+ misc_feature complement(order(274833..274844,274848..274853,
+ 274911..274916,275145..275153,275208..275213,
+ 275217..275222))
+ /locus_tag="SARI_00278"
+ /note="active site"
+ /db_xref="CDD:198425"
+ misc_feature complement(order(274836..274844,274848..274850,
+ 274911..274916,275010..275015,275145..275153,
+ 275205..275213,275220..275222))
+ /locus_tag="SARI_00278"
+ /note="UGI interface [polypeptide binding]; other site"
+ /db_xref="CDD:198425"
+ misc_feature complement(order(274848..274850,275217..275219))
+ /locus_tag="SARI_00278"
+ /note="catalytic site [active]"
+ /db_xref="CDD:198425"
+ gene 275727..276110
+ /locus_tag="SARI_00279"
+ CDS 275727..276110
+ /locus_tag="SARI_00279"
+ /inference="protein motif:HMMPfam:IPR001150"
+ /inference="protein motif:HMMPIR:IPR011140"
+ /inference="protein motif:ScanRegExp:IPR001150"
+ /inference="similar to AA sequence:INSD:AAL21540.1"
+ /note="stress-induced glycyl radical protein that can
+ replace an oxidatively damaged pyruvate formate-lyase
+ subunit"
+ /codon_start=1
+ /transl_table=11
+ /product="autonomous glycyl radical cofactor GrcA"
+ /protein_id="YP_001569363.1"
+ /db_xref="GI:161502251"
+ /db_xref="InterPro:IPR001150"
+ /db_xref="InterPro:IPR011140"
+ /translation="MITGIQITKAANDDLLNSFWLLDSEKGEARCIVAKSGFAEDEVV
+ AVSKLGEIEYREIPMEVKPEVRVEGGQHLNVNVLRRETLEDAVKHPEKYPQLTIRVSG
+ YAVRFNSLTPEQQRDVIARTFTESL"
+ misc_feature 275727..276107
+ /locus_tag="SARI_00279"
+ /note="autonomous glycyl radical cofactor GrcA;
+ Provisional; Region: PRK11127"
+ /db_xref="CDD:182983"
+ gene complement(276224..277558)
+ /locus_tag="SARI_00280"
+ CDS complement(276224..277558)
+ /locus_tag="SARI_00280"
+ /inference="protein motif:HMMPfam:IPR001650"
+ /inference="protein motif:HMMPfam:IPR011545"
+ /inference="protein motif:HMMSmart:IPR001650"
+ /inference="protein motif:HMMSmart:IPR014001"
+ /inference="protein motif:ScanRegExp:IPR000629"
+ /inference="similar to AA sequence:INSD:AAX66554.1"
+ /note="facilitates an early step in the assembly of the
+ 50S subunit of the ribosome"
+ /codon_start=1
+ /transl_table=11
+ /product="ATP-dependent RNA helicase SrmB"
+ /protein_id="YP_001569364.1"
+ /db_xref="GI:161502252"
+ /db_xref="InterPro:IPR000629"
+ /db_xref="InterPro:IPR001650"
+ /db_xref="InterPro:IPR011545"
+ /db_xref="InterPro:IPR014001"
+ /translation="MTVTTFSELELDESLLDALQDKGFTRPTAIQAAAIPPALDGRDV
+ LGSAPTGTGKTAAYLLPALQHLLDFPRKKSGPPRILILTPTRELAIQVADHARELAKH
+ THLDIATITGGVAYMNHAEVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEAD
+ RMLDMGFAQDIEHIAGETRWRKQTMLFSATLEGDAIKDFAERLLEDPVEVSATPSTRE
+ RKKIHQWYYRADNFEHKVALLKHLLKQDDATRSIVFVRKRERVHELAETLRLAGINNC
+ YLEGEMAQIKRNEGIKRLTDGRVNVLVATDVAARGIDIPDVSHVINFDMPRSGDTYLH
+ RIGRTGRAGRKGTAISLVEAHDHLLLLKIGRYIEEPLKARVIDELRPTTRAPSEKLTG
+ KPSKKVLAKRAEKKKEKEKEKPRVKKRHRDTKNIGKRRKPSGTKMQEQSSEE"
+ misc_feature complement(276254..277549)
+ /locus_tag="SARI_00280"
+ /note="ATP-dependent RNA helicase SrmB; Provisional;
+ Region: PRK11192"
+ /db_xref="CDD:236877"
+ misc_feature complement(276926..277507)
+ /locus_tag="SARI_00280"
+ /note="DEAD-box helicases. A diverse family of proteins
+ involved in ATP-dependent RNA unwinding, needed in a
+ variety of cellular processes including splicing, ribosome
+ biogenesis and RNA degradation. The name derives from the
+ sequence of the Walker B motif; Region: DEADc; cd00268"
+ /db_xref="CDD:238167"
+ misc_feature complement(277394..277408)
+ /locus_tag="SARI_00280"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238167"
+ misc_feature complement(277079..277090)
+ /locus_tag="SARI_00280"
+ /note="Mg++ binding site [ion binding]; other site"
+ /db_xref="CDD:238167"
+ misc_feature complement(276989..276997)
+ /locus_tag="SARI_00280"
+ /note="motif III; other site"
+ /db_xref="CDD:238167"
+ misc_feature complement(276557..276898)
+ /locus_tag="SARI_00280"
+ /note="Helicase superfamily c-terminal domain; associated
+ with DEXDc-, DEAD-, and DEAH-box proteins, yeast
+ initiation factor 4A, Ski2p, and Hepatitis C virus NS3
+ helicases; this domain is found in a wide variety of
+ helicases and helicase related proteins; may...; Region:
+ HELICc; cd00079"
+ /db_xref="CDD:238034"
+ misc_feature complement(order(276638..276646,276719..276724,
+ 276782..276793))
+ /locus_tag="SARI_00280"
+ /note="nucleotide binding region [chemical binding]; other
+ site"
+ /db_xref="CDD:238034"
+ misc_feature complement(order(276557..276559,276620..276622))
+ /locus_tag="SARI_00280"
+ /note="ATP-binding site [chemical binding]; other site"
+ /db_xref="CDD:238034"
+ gene 277688..278425
+ /locus_tag="SARI_00281"
+ CDS 277688..278425
+ /locus_tag="SARI_00281"
+ /inference="protein motif:HMMPfam:IPR007848"
+ /inference="protein motif:ScanRegExp:IPR002052"
+ /inference="similar to AA sequence:INSD:AAL21536.1"
+ /note="'KEGG: eci:UTI89_C2897 1.3e-97 yfiC; hypothetical
+ protein YfiC K00599;
+ COG: COG4123 Predicted O-methyltransferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="tRNA (adenine-N(6)-)-methyltransferase"
+ /protein_id="YP_001569365.2"
+ /db_xref="GI:448236188"
+ /db_xref="InterPro:IPR002052"
+ /db_xref="InterPro:IPR007848"
+ /translation="MSHSGSVLRRNGFTFKQFFVAHDRCAMKVGTDGILLGAWAPVAD
+ VKRILDIGTGSGLLALMLAQRTDDNVPVDAVELDAEAAMQAQENVAHSPWAHRITVHT
+ DDIQRWAPRQTVRFDLIISNPPYYEPGVECATPQREQARYTATLDHQTLLAIAADCIT
+ EDGFLCVVLPEQIGNAFTQQALSMGWHLRLRTDVAENEARLPHRVLLAFSPQAGECFS
+ DRLVIRGPDQHYSESYTALTQAFYLFM"
+ misc_feature 277688..278422
+ /locus_tag="SARI_00281"
+ /note="Predicted O-methyltransferase [General function
+ prediction only]; Region: COG4123"
+ /db_xref="CDD:226608"
+ misc_feature 277826..>278062
+ /locus_tag="SARI_00281"
+ /note="S-adenosylmethionine-dependent methyltransferases
+ (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
+ that use S-adenosyl-L-methionine (SAM or AdoMet) as a
+ substrate for methyltransfer, creating the product
+ S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
+ cd02440"
+ /db_xref="CDD:100107"
+ misc_feature order(277838..277858,277913..277918,277994..278002,
+ 278051..278053)
+ /locus_tag="SARI_00281"
+ /note="S-adenosylmethionine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:100107"
+ gene complement(278410..280032)
+ /locus_tag="SARI_00282"
+ CDS complement(278410..280032)
+ /locus_tag="SARI_00282"
+ /inference="protein motif:FPrintScan:IPR001100"
+ /inference="protein motif:FPrintScan:IPR013027"
+ /inference="protein motif:HMMPfam:IPR003953"
+ /inference="protein motif:HMMPfam:IPR004112"
+ /inference="protein motif:HMMTigr:IPR005288"
+ /inference="protein motif:superfamily:IPR004112"
+ /inference="similar to AA sequence:INSD:CAD02790.1"
+ /note="catalyzes the formation of oxaloacetate from
+ L-aspartate"
+ /codon_start=1
+ /transl_table=11
+ /product="L-aspartate oxidase"
+ /protein_id="YP_001569366.1"
+ /db_xref="GI:161502254"
+ /db_xref="InterPro:IPR001100"
+ /db_xref="InterPro:IPR003953"
+ /db_xref="InterPro:IPR004112"
+ /db_xref="InterPro:IPR005288"
+ /db_xref="InterPro:IPR013027"
+ /translation="MMITPELSCDVLIIGSGAAGLSLALRLAEKHKVIVLSKGPVSEG
+ STFYAQGGIAAVFDETDSIESHVEDTLIAGAGICDRHAVEFVASNARACVQWLIDQGV
+ LFDTHIQPNGEESYHLTREGGHSHRRILHAADATGKEVETTLVSRALKHPNIRVLERS
+ NAVDLIISDKIGLPGPRRVVGAWIWNRNKEWVETCHAKSVVLATGGASKVYQYTTNPD
+ ISSGDGIAMAWRAGCRVANLEFNQFHPTALYHPQARNFLLTEALRGEGAYLKRPDGSR
+ FMPDVDERGELAPRDIVARAIDHEMKRLGADCMFLDISHKPDDFVRQHFPMIYAKLLD
+ LGMDLTKEPIPVVPAAHYTCGGVVVDDYGRTDVDGLYAIGEVSYTGLHGANRMASNSL
+ LECLVYGWSAAKDIDRRMPYAHGVDVLPAWDESRVENADEQVVIQHNWHELRLLMWDY
+ VGIVRTTKRLERALRRITMLQQEIDEYYANFRVSNNLLELRNLAQVAELIVRCAIMRK
+ ESRGLHFTLDYPQQLAESGPSILSPLTSHINR"
+ misc_feature complement(278428..280032)
+ /locus_tag="SARI_00282"
+ /note="L-aspartate oxidase; Provisional; Region: PRK09077"
+ /db_xref="CDD:236374"
+ misc_feature complement(278812..279939)
+ /locus_tag="SARI_00282"
+ /note="L-aspartate oxidase; Provisional; Region: PRK06175"
+ /db_xref="CDD:180442"
+ misc_feature complement(<278470..278715)
+ /locus_tag="SARI_00282"
+ /note="Fumarate reductase flavoprotein C-term; Region:
+ Succ_DH_flav_C; pfam02910"
+ /db_xref="CDD:217281"
+ gene 280457..281032
+ /locus_tag="SARI_00283"
+ CDS 280457..281032
+ /locus_tag="SARI_00283"
+ /inference="protein motif:HMMPfam:IPR007627"
+ /inference="protein motif:HMMPfam:IPR013249"
+ /inference="protein motif:ScanRegExp:IPR000838"
+ /inference="protein motif:superfamily:IPR013324"
+ /inference="protein motif:superfamily:IPR013325"
+ /inference="similar to AA sequence:INSD:CAD02789.1"
+ /note="Member of the extracytoplasmic function sigma
+ factors which are active under specific conditions; binds
+ with the catalytic core of RNA polymerase to produce the
+ holoenzyme and directs bacterial core RNA polymerase to
+ specific promoter elements to initiate transcription; this
+ sigma factor is involved in heat shock and oxidative
+ stress response"
+ /codon_start=1
+ /transl_table=11
+ /product="RNA polymerase sigma factor RpoE"
+ /protein_id="YP_001569367.1"
+ /db_xref="GI:161502255"
+ /db_xref="InterPro:IPR000838"
+ /db_xref="InterPro:IPR007627"
+ /db_xref="InterPro:IPR013249"
+ /db_xref="InterPro:IPR013324"
+ /db_xref="InterPro:IPR013325"
+ /translation="MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSG
+ DVPDVVQESFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNHLVAQGRRPPSSDVDVIE
+ AENFESGGALKEISNPENLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIA
+ AIMDCPVGTVRSRIFRAREAIDNKVQPLIRR"
+ misc_feature 280457..281023
+ /locus_tag="SARI_00283"
+ /note="RNA polymerase sigma factor RpoE; Region:
+ RpoE_Sigma70; TIGR02939"
+ /db_xref="CDD:131985"
+ misc_feature 280529..280732
+ /locus_tag="SARI_00283"
+ /note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542"
+ /db_xref="CDD:218138"
+ misc_feature 280838..280999
+ /locus_tag="SARI_00283"
+ /note="Sigma70, region (SR) 4 refers to the most
+ C-terminal of four conserved domains found in Escherichia
+ coli (Ec) sigma70, the main housekeeping sigma, and
+ related sigma-factors (SFs). A SF is a dissociable subunit
+ of RNA polymerase, it directs bacterial or...; Region:
+ Sigma70_r4; cd06171"
+ /db_xref="CDD:100119"
+ misc_feature order(280871..280873,280901..280903,280919..280924,
+ 280952..280954,280958..280963,280967..280975,
+ 280979..280984,280988..280990)
+ /locus_tag="SARI_00283"
+ /note="DNA binding residues [nucleotide binding]"
+ /db_xref="CDD:100119"
+ gene 281064..281714
+ /locus_tag="SARI_00284"
+ CDS 281064..281714
+ /locus_tag="SARI_00284"
+ /inference="protein motif:HMMPfam:IPR005572"
+ /inference="protein motif:HMMPfam:IPR005573"
+ /inference="similar to AA sequence:INSD:AAL21533.1"
+ /note="'COG: COG3073 Negative regulator of sigma E
+ activity;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="anti-RNA polymerase sigma factor SigE"
+ /protein_id="YP_001569368.1"
+ /db_xref="GI:161502256"
+ /db_xref="InterPro:IPR005572"
+ /db_xref="InterPro:IPR005573"
+ /translation="MQKEKLSALMDGETLDSELLNALTHDPEMQKTWESYHLIRDSMR
+ GDTPDVLHFDISARVMAAIENDPVRQVSPLIPEAQPAPQQWQKMPFWKKVRPWAAQLT
+ QVGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEAAPVG
+ SQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ"
+ misc_feature 281064..281711
+ /locus_tag="SARI_00284"
+ /note="anti-RNA polymerase sigma factor SigE; Provisional;
+ Region: PRK10863"
+ /db_xref="CDD:182789"
+ misc_feature 281064..281330
+ /locus_tag="SARI_00284"
+ /note="Anti sigma-E protein RseA, N-terminal domain;
+ Region: RseA_N; pfam03872"
+ /db_xref="CDD:217773"
+ misc_feature 281454..281621
+ /locus_tag="SARI_00284"
+ /note="Anti sigma-E protein RseA, C-terminal domain;
+ Region: RseA_C; pfam03873"
+ /db_xref="CDD:217774"
+ gene 281714..282670
+ /gene="rseB"
+ /locus_tag="SARI_00285"
+ CDS 281714..282670
+ /gene="rseB"
+ /locus_tag="SARI_00285"
+ /inference="protein motif:HMMPfam:IPR005588"
+ /inference="similar to AA sequence:INSD:CAD02787.1"
+ /note="periplasmic protein; interacts with the C-terminal
+ domain of RseA and stimulates RseA binding to sigmaE via
+ the cytoplasmic RseA N-terminal domain which then
+ sequesters sigmaE in the membrane thereby preventing
+ sigmaE associated with core RNAP"
+ /codon_start=1
+ /transl_table=11
+ /product="periplasmic negative regulator of sigmaE"
+ /protein_id="YP_001569369.1"
+ /db_xref="GI:161502257"
+ /db_xref="InterPro:IPR005588"
+ /translation="MKQLWFAMSLVAGSLFFSVNASADPASGALLQQMNIASQSLNYE
+ LSFVSITKQGVESLRYRHARLDSRPLAQLLQLDGPRREVVQRGNEISYFEPGLEPFTL
+ NGDYIVDSLPSLIYTDFKRLAPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWM
+ DMDTKLPMRVDLLDRDGETLEQFRVIAFTVSKDIGSTMQALAKANLPPLLSVPGGEKT
+ KFNWSPSWVPQGFSEVSSSRRPLPTMDNLPIESRLYSDGLFSFSVNVNRATPNSSDQM
+ LRTGRRTVYSSVRDNAEITIVGELPPQTAKRIADSIKFRAVQ"
+ misc_feature 281714..282667
+ /gene="rseB"
+ /locus_tag="SARI_00285"
+ /note="Negative regulator of sigma E activity [Signal
+ transduction mechanisms]; Region: RseB; COG3026"
+ /db_xref="CDD:225570"
+ misc_feature 281714..282667
+ /gene="rseB"
+ /locus_tag="SARI_00285"
+ /note="anti-sigma E factor; Provisional; Region: rseB;
+ PRK09455"
+ /db_xref="CDD:236525"
+ gene 282667..283146
+ /locus_tag="SARI_00286"
+ CDS 282667..283146
+ /locus_tag="SARI_00286"
+ /inference="protein motif:HMMPfam:IPR007359"
+ /inference="similar to AA sequence:REFSEQ:YP_149615.1"
+ /note="involved in the reduction of the SoxR iron-sulfur
+ cluster"
+ /codon_start=1
+ /transl_table=11
+ /product="SoxR reducing system protein RseC"
+ /protein_id="YP_001569370.1"
+ /db_xref="GI:161502258"
+ /db_xref="InterPro:IPR007359"
+ /translation="MIKEWATVVSWQNGQAVVSCDVKASCSSCASRAGCGSRVLNKLG
+ PQTSHTIVVPSAEPLAPGQKVELGIAEKSLLGSALLVYMSPLAGLFFCAALFQVLFGS
+ DLAALSGAVLGGMGGFLVARGYSRKLSERDAWQPVILNVALPPGLVRVETTSIEMRQ"
+ misc_feature 282667..283128
+ /locus_tag="SARI_00286"
+ /note="SoxR reducing system protein RseC; Provisional;
+ Region: PRK10862"
+ /db_xref="CDD:182788"
+ gene 283575..284054
+ /locus_tag="SARI_00287"
+ CDS 283575..284054
+ /locus_tag="SARI_00287"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569371.1"
+ /db_xref="GI:161502259"
+ /translation="MLSGNTGAPDSTTATTTTAVNYVLNQALAAYSLVASRYTADGAT
+ TANAGLVKLVNSMGAGSLVMTQAAVTNAIQTYPSLGKGQKIQDLRASRSAEVTYTSST
+ GFPIAVYVRISGGYSAVLYTHVNGIEFGDGGSTASNTSIAMAFFIVPNGATYLVEAT"
+ gene 284096..284221
+ /locus_tag="SARI_00288"
+ CDS 284096..284221
+ /locus_tag="SARI_00288"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569372.1"
+ /db_xref="GI:161502260"
+ /translation="MIMMAYYKDKNNAVYTYDAYITQDLYIKEGLVLIIRSHGNY"
+ gene 284208..284441
+ /locus_tag="SARI_00289"
+ CDS 284208..284441
+ /locus_tag="SARI_00289"
+ /inference="protein motif:HMMPfam:IPR003458"
+ /note="'COG: NOG18524 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569373.1"
+ /db_xref="GI:161502261"
+ /db_xref="InterPro:IPR003458"
+ /translation="MEIINPPPMHEDLIQAAENKRQRLLFRADWRTELMLGETSDANR
+ NKLSAWLANKNEVKLVDITTTPDNIIWPAPPEG"
+ misc_feature <284211..284435
+ /locus_tag="SARI_00289"
+ /note="Caudovirales tail fibre assembly protein; Region:
+ Caudo_TAP; pfam02413"
+ /db_xref="CDD:217022"
+ gene 284648..284866
+ /locus_tag="SARI_00290"
+ CDS 284648..284866
+ /locus_tag="SARI_00290"
+ /note="'Psort location: extracellular, including cell
+ wall, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569374.1"
+ /db_xref="GI:161502262"
+ /translation="MKYIKNIFLVLTFALSAAAFSTSAMAASDTKAPPKANDIPHDPL
+ PDMSKFCQDLLEGGGPIPPAMYQYCWQN"
+ gene complement(285259..285668)
+ /locus_tag="SARI_00291"
+ /note="Pseudogene compared to gi|16765208|ref|NP_460823.1|
+ phage-tail assembly-like protein [Salmonella typhimurium
+ LT2]"
+ gene 286235..288358
+ /locus_tag="SARI_00292"
+ CDS 286235..288358
+ /locus_tag="SARI_00292"
+ /inference="similar to AA sequence:INSD:AAD40326.1"
+ /note="'KEGG: gga:427844 4.7e-07 LOC427844; similar to
+ leucine-rich repeat kinase 1 K08843;
+ COG: COG4886 Leucine-rich repeat (LRR) protein;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="E3 ubiquitin-protein ligase SspH2"
+ /protein_id="YP_001569375.2"
+ /db_xref="GI:448236189"
+ /translation="MPFYVGSGCRPATISNHRIYLIARFDTPPEMSSWEKSKAFFCST
+ HQTEALECIRTICHPPAGTTREDVVSRFEQLRMLAYAGCEENIHSGLHGENHYCIMDE
+ DNQEILSVTLDDAGNYTVNCQEYSETYRLTMETEPGEEYTEHAEGASGTSRLPATTAP
+ QTAAEYYAVWSAWQRAAPEGEARGRAAAVKKMRDCLKNGNPVLCLERAGLTTLPDHLP
+ PHITILFIPGNNLTSLPALPSGLRELSVSYNQLTSLPPLPSGLWKLSVFNNQLASLPP
+ LPSGLQTLWAYHNQLPSLPALPPGLRDLSVSNNQLASLPALPSGLRKLWVSHNQLPSL
+ PELPSGLRALWVSHNQLASLPESITGLSSEATVDLEGNPLSERTLQTLRDITSAPDYS
+ GPRIRFDMAGPSVPREARALHLAVADWLMPAREGEPDPADRWHASGQEDNAAAFSLFL
+ DRLRETENFEKDAGFKAQISSWLALLAEDDVLRAKTFAMATEATSSCQDRITLALHHM
+ KNVQLVHNAEKGVYDNNLPGLVSTGREMFRMEMLERIAREKARTLAFVDEIEVYLAYQ
+ NKLKKPLGLTSVTAKMRFFGVSGVTASDLRSAERQVKAAEKREFSEWILQWGPLHSVL
+ ERKEPERFNALREKQISDYEHTYQMLSDTELKPSGLVGNTDAECTIGVRAMESAKKEF
+ LNGLRPLVEEMLGSYLKVKARWRLN"
+ misc_feature 286235..288355
+ /locus_tag="SARI_00292"
+ /note="E3 ubiquitin-protein ligase SspH2; Provisional;
+ Region: PRK15387"
+ /db_xref="CDD:185285"
+ misc_feature 286325..>286663
+ /locus_tag="SARI_00292"
+ /note="pathogenicity island 2 effector protein SseI;
+ Provisional; Region: PRK15372"
+ /db_xref="CDD:185270"
+ misc_feature 286667..>286756
+ /locus_tag="SARI_00292"
+ /note="Type III secretion system leucine rich repeat
+ protein; Region: TTSSLRR; pfam12468"
+ /db_xref="CDD:204932"
+ gene complement(288351..288503)
+ /locus_tag="SARI_00293"
+ CDS complement(288351..288503)
+ /locus_tag="SARI_00293"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569376.1"
+ /db_xref="GI:161502264"
+ /translation="MIYQHLWGTENQGLSRYSPVHYQCCLVLFVRDSLCFTTPHSPGA
+ VNIVLS"
+ gene 288563..288724
+ /locus_tag="SARI_00294"
+ CDS 288563..288724
+ /locus_tag="SARI_00294"
+ /note="'KEGG: sty:STY2205 3.2e-10 umuC; UmuC protein
+ K03502;
+ COG: COG0389 Nucleotidyltransferase/DNA polymerase
+ involved in DNA repair;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569377.1"
+ /db_xref="GI:161502265"
+ /translation="MEVLDQLNAKDGKGRLYFAGPGIQQQWEMKREKLSPDIPPAMKT
+ CFRLSARFN"
+ misc_feature <288563..288670
+ /locus_tag="SARI_00294"
+ /note="Domain of unknown function (DUF4113); Region:
+ DUF4113; pfam13438"
+ /db_xref="CDD:222129"
+ gene 289037..290836
+ /locus_tag="SARI_00295"
+ CDS 289037..290836
+ /locus_tag="SARI_00295"
+ /inference="protein motif:FPrintScan:IPR000795"
+ /inference="protein motif:Gene3D:IPR000640"
+ /inference="protein motif:HMMPfam:IPR000640"
+ /inference="protein motif:HMMPfam:IPR000795"
+ /inference="protein motif:HMMPfam:IPR004161"
+ /inference="protein motif:HMMPfam:IPR013842"
+ /inference="protein motif:HMMTigr:IPR005225"
+ /inference="protein motif:HMMTigr:IPR006297"
+ /inference="protein motif:ScanRegExp:IPR000795"
+ /inference="protein motif:superfamily:IPR009022"
+ /inference="protein motif:superfamily:IPR011051"
+ /note="binds to the ribosome on the universally-conserved
+ alpha-sarcin loop"
+ /codon_start=1
+ /transl_table=11
+ /product="GTP-binding protein LepA"
+ /protein_id="YP_001569378.1"
+ /db_xref="GI:161502266"
+ /db_xref="InterPro:IPR000640"
+ /db_xref="InterPro:IPR000795"
+ /db_xref="InterPro:IPR004161"
+ /db_xref="InterPro:IPR005225"
+ /db_xref="InterPro:IPR006297"
+ /db_xref="InterPro:IPR009022"
+ /db_xref="InterPro:IPR011051"
+ /db_xref="InterPro:IPR013842"
+ /translation="MKNIRNFSIIAHIDHGKSTLSDRIIQICGGLSDREMEAQVLDSM
+ DLERERGITIKAQSVTLDFKASDGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVV
+ DAGQGVEAQTLANCYTAMEMDLEVVPVLNKIDLPAADPERVAEEIEDIVGIDATDAVR
+ CSAKTGVGVTDVLERLVRDIPPPQGDPDGPLQALIIDSWFDNYLGVVSLVRIKNGTMR
+ KGDKIKVMSTGQTYNADRLGIFTPKQVDRTELKCGEVGWLVCAIKDILGAPVGDTLTS
+ ARNPAEKALPGFKKVKPQVYAGLFPVSSDDYESFRDALGKLSLNDASLFYEPENSSAL
+ GFGFRCGFLGLLHMEIIQERLEREYDLDLITTAPTVVYEVETTAKEIIYVDSPSKLPP
+ LNNIYELREPIAECHMLLPQAYLGNVITLCIEKRGVQTNMVYHGNQVALTYEIPMAEV
+ VLDFFDRLKSTSRGYASLDYNFKRFQASDMVRVDVLINNERVDALALITHRDNAQNRG
+ RELVDKMKDLIPRQQFDIAIQAAIGTHIIARSTVKQLRKNVLAKCYGGDISRKKKLLQ
+ KQKEGKKRMKQIGNVELPQEAFLAILHVGKDNK"
+ misc_feature 289037..290827
+ /locus_tag="SARI_00295"
+ /note="GTP-binding protein LepA; Provisional; Region:
+ PRK05433"
+ /db_xref="CDD:235462"
+ misc_feature 289049..289576
+ /locus_tag="SARI_00295"
+ /note="LepA also known as Elongation Factor 4 (EF4);
+ Region: LepA; cd01890"
+ /db_xref="CDD:206677"
+ misc_feature 289067..289090
+ /locus_tag="SARI_00295"
+ /note="G1 box; other site"
+ /db_xref="CDD:206677"
+ misc_feature order(289070..289072,289076..289078,289088..289093,
+ 289100..289102,289109..289114,289205..289210,
+ 289277..289282,289349..289354,289460..289462,
+ 289472..289474)
+ /locus_tag="SARI_00295"
+ /note="putative GEF interaction site [polypeptide
+ binding]; other site"
+ /db_xref="CDD:206677"
+ misc_feature order(289076..289093,289427..289432,289436..289438,
+ 289520..289528)
+ /locus_tag="SARI_00295"
+ /note="GTP/Mg2+ binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:206677"
+ misc_feature 289172..289207
+ /locus_tag="SARI_00295"
+ /note="Switch I region; other site"
+ /db_xref="CDD:206677"
+ misc_feature 289193..289195
+ /locus_tag="SARI_00295"
+ /note="G2 box; other site"
+ /db_xref="CDD:206677"
+ misc_feature 289265..289276
+ /locus_tag="SARI_00295"
+ /note="G3 box; other site"
+ /db_xref="CDD:206677"
+ misc_feature 289271..289327
+ /locus_tag="SARI_00295"
+ /note="Switch II region; other site"
+ /db_xref="CDD:206677"
+ misc_feature 289427..289438
+ /locus_tag="SARI_00295"
+ /note="G4 box; other site"
+ /db_xref="CDD:206677"
+ misc_feature 289520..289528
+ /locus_tag="SARI_00295"
+ /note="G5 box; other site"
+ /db_xref="CDD:206677"
+ misc_feature 289613..289864
+ /locus_tag="SARI_00295"
+ /note="lepA_II: This subfamily represents the domain II of
+ LepA, a GTP-binding protein localized in the cytoplasmic
+ membrane. The N-terminal domain of LepA shares regions of
+ homology to translation factors. In terms of interaction
+ with the ribosome, EF-G, EF-Tu...; Region: lepA_II;
+ cd03699"
+ /db_xref="CDD:239670"
+ misc_feature 290237..290473
+ /locus_tag="SARI_00295"
+ /note="lepA_C: This family represents the C-terminal
+ region of LepA, a GTP-binding protein localized in the
+ cytoplasmic membrane. LepA is ubiquitous in Bacteria and
+ Eukaryota (e.g. Saccharomyces cerevisiae GUF1p), but is
+ missing from Archaea. LepA exhibits...; Region: lepA_C;
+ cd03709"
+ /db_xref="CDD:239680"
+ misc_feature 290495..290818
+ /locus_tag="SARI_00295"
+ /note="GTP-binding protein LepA C-terminus; Region:
+ LepA_C; pfam06421"
+ /db_xref="CDD:203441"
+ unsure 290183..290270
+ /locus_tag="SARI_00295"
+ /note="Sequence derived from one plasmid subclone"
+ gene 290853..291827
+ /locus_tag="SARI_00296"
+ CDS 290853..291827
+ /locus_tag="SARI_00296"
+ /inference="protein motif:HMMPanther:IPR000223"
+ /inference="protein motif:HMMPfam:IPR006198"
+ /inference="protein motif:HMMTigr:IPR000223"
+ /inference="protein motif:ScanRegExp:IPR000223"
+ /inference="protein motif:superfamily:IPR011056"
+ /inference="similar to AA sequence:REFSEQ:YP_217564.1"
+ /note="catalyzes the cleavage of the amino-terminal leader
+ peptide from secretory proteins"
+ /codon_start=1
+ /transl_table=11
+ /product="signal peptidase I"
+ /protein_id="YP_001569379.1"
+ /db_xref="GI:161502267"
+ /db_xref="InterPro:IPR000223"
+ /db_xref="InterPro:IPR006198"
+ /db_xref="InterPro:IPR011056"
+ /translation="MANMFALILVIATLVTGILWCVDKFVFAPKRRARQAAAQTATGD
+ ALDNATLNKVAPKPGWLETGASVFPVLAIVLIVRSFLYEPFQIPSGSMMPTLLIGDFI
+ LVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKITYDP
+ IAKEVTIQPGCSSGQACENALPVTYSNVEPSDFVQTFARRNGGEATSGFFEVPLNETK
+ ENGIRLTERKETLGDVTHRILMVPIAQDQLGMYYQQPGQPLATWVVPPGQYFMMGDNR
+ DNSADSRYWGFVPEANLVGKAVAIWMSFDKQEGEWPTGVRLSRIGGIH"
+ misc_feature 290853..291824
+ /locus_tag="SARI_00296"
+ /note="signal peptidase I; Provisional; Region: PRK10861"
+ /db_xref="CDD:182787"
+ misc_feature 291099..>291305
+ /locus_tag="SARI_00296"
+ /note="The S26 Type I signal peptidase (SPase; LepB;
+ leader peptidase B; leader peptidase I; EC 3.4.21.89)
+ family members are essential membrane-bound serine
+ proteases that function to cleave the amino-terminal
+ signal peptide extension from proteins that are...;
+ Region: S26_SPase_I; cd06530"
+ /db_xref="CDD:119398"
+ misc_feature order(291123..291125,291288..291290)
+ /locus_tag="SARI_00296"
+ /note="Catalytic site [active]"
+ /db_xref="CDD:119398"
+ misc_feature <291657..291743
+ /locus_tag="SARI_00296"
+ /note="The S26 Type I signal peptidase (SPase; LepB;
+ leader peptidase B; leader peptidase I; EC 3.4.21.89)
+ family members are essential membrane-bound serine
+ proteases that function to cleave the amino-terminal
+ signal peptide extension from proteins that are...;
+ Region: S26_SPase_I; cd06530"
+ /db_xref="CDD:119398"
+ misc_feature 291944..292155
+ /inference="nucleotide motif:Rfam:RF00552"
+ /note="rncO; Rfam score 223.8; SARI_00297"
+ gene 292778..293683
+ /gene="era"
+ /locus_tag="SARI_00298"
+ CDS 292778..293683
+ /gene="era"
+ /locus_tag="SARI_00298"
+ /inference="protein motif:HMMPfam:IPR002917"
+ /inference="protein motif:HMMPfam:IPR004044"
+ /inference="protein motif:HMMTigr:IPR005225"
+ /inference="protein motif:HMMTigr:IPR005289"
+ /inference="protein motif:HMMTigr:IPR005662"
+ /inference="similar to AA sequence:INSD:AAO68002.1"
+ /note="Era; Escherichia coli Ras-like protein; Bex;
+ Bacillus Era-complementing segment; essential protein in
+ Escherichia coli that is involved in many cellular
+ processes; GTPase; binds the cell membrane through
+ apparent C-terminal domain; mutants are arrested during
+ the cell cycle; Streptococcus pneumoniae Era binds to RNA
+ and Escherichia coli Era binds 16S rRNA and 30S ribosome"
+ /codon_start=1
+ /transl_table=11
+ /product="GTP-binding protein Era"
+ /protein_id="YP_001569380.1"
+ /db_xref="GI:161502268"
+ /db_xref="InterPro:IPR002917"
+ /db_xref="InterPro:IPR004044"
+ /db_xref="InterPro:IPR005225"
+ /db_xref="InterPro:IPR005289"
+ /db_xref="InterPro:IPR005662"
+ /translation="MSIEKTYCGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTR
+ HRIVGIHTEGPYQAIYVDTPGLHIEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWT
+ PDDEMVLNKLRDGKAPVILAVNKVDNVQEKADLLPHLQFLASQMSFLDIVPISAETGM
+ NVDTIASIVRKHLPEATHHFPEDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEI
+ ERFVTNERGGYDINGLILVEREGQKKMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLE
+ LWVKVKSGWADDERALRSLGYVDDL"
+ misc_feature 292787..293668
+ /gene="era"
+ /locus_tag="SARI_00298"
+ /note="GTPase Era; Reviewed; Region: era; PRK00089"
+ /db_xref="CDD:234624"
+ misc_feature 292793..293296
+ /gene="era"
+ /locus_tag="SARI_00298"
+ /note="E. coli Ras-like protein (Era) is a multifunctional
+ GTPase; Region: Era; cd04163"
+ /db_xref="CDD:206726"
+ misc_feature 292820..292843
+ /gene="era"
+ /locus_tag="SARI_00298"
+ /note="G1 box; other site"
+ /db_xref="CDD:206726"
+ misc_feature order(292826..292846,292886..292888,292898..292906,
+ 292970..292972,293147..293152,293156..293158,
+ 293240..293245)
+ /gene="era"
+ /locus_tag="SARI_00298"
+ /note="GTP/Mg2+ binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:206726"
+ misc_feature order(292865..292867,292871..292915)
+ /gene="era"
+ /locus_tag="SARI_00298"
+ /note="Switch I region; other site"
+ /db_xref="CDD:206726"
+ misc_feature 292904..292906
+ /gene="era"
+ /locus_tag="SARI_00298"
+ /note="G2 box; other site"
+ /db_xref="CDD:206726"
+ misc_feature order(292958..292975,293036..293041)
+ /gene="era"
+ /locus_tag="SARI_00298"
+ /note="Switch II region; other site"
+ /db_xref="CDD:206726"
+ misc_feature 292961..292972
+ /gene="era"
+ /locus_tag="SARI_00298"
+ /note="G3 box; other site"
+ /db_xref="CDD:206726"
+ misc_feature 293147..293158
+ /gene="era"
+ /locus_tag="SARI_00298"
+ /note="G4 box; other site"
+ /db_xref="CDD:206726"
+ misc_feature 293240..293248
+ /gene="era"
+ /locus_tag="SARI_00298"
+ /note="G5 box; other site"
+ /db_xref="CDD:206726"
+ misc_feature 293402..293635
+ /gene="era"
+ /locus_tag="SARI_00298"
+ /note="KH domain; Region: KH_2; pfam07650"
+ /db_xref="CDD:203707"
+ gene 293755..294423
+ /locus_tag="SARI_00299"
+ CDS 293755..294423
+ /locus_tag="SARI_00299"
+ /inference="protein motif:HMMPfam:IPR003717"
+ /inference="protein motif:HMMTigr:IPR003717"
+ /inference="similar to AA sequence:INSD:AAO68003.1"
+ /note="'COG: COG1381 Recombinational DNA repair protein
+ (RecF pathway);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569381.1"
+ /db_xref="GI:161502269"
+ /db_xref="InterPro:IPR003717"
+ /translation="MLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLLRYSGRG
+ EVKTLRSAEAVSLALPLNGITLYSGLYINELLSRVLEYETRFSELFFDYLNCIQALAG
+ TTGSPEPVLRRFELALLGHLGYGVNFTHCAGSGEQVDDTMTYRYREEKGFIASVVIDN
+ NTFTGRHLKALEAREFPDVDTLRAAKRFTRMALKPYLGGKPLKSRELFRRFMPKRTVK
+ MKKD"
+ misc_feature 293755..294402
+ /locus_tag="SARI_00299"
+ /note="DNA repair protein RecO; Reviewed; Region: recO;
+ PRK00085"
+ /db_xref="CDD:234622"
+ misc_feature <293755..293922
+ /locus_tag="SARI_00299"
+ /note="Recombination protein O N terminal; Region: RecO_N;
+ pfam11967"
+ /db_xref="CDD:221346"
+ misc_feature 293932..294372
+ /locus_tag="SARI_00299"
+ /note="Recombination protein O C terminal; Region: RecO_C;
+ pfam02565"
+ /db_xref="CDD:217107"
+ gene 294435..295166
+ /locus_tag="SARI_00300"
+ CDS 294435..295166
+ /locus_tag="SARI_00300"
+ /inference="protein motif:BlastProDom:IPR004569"
+ /inference="protein motif:HMMPfam:IPR004569"
+ /inference="protein motif:HMMTigr:IPR004569"
+ /inference="similar to AA sequence:REFSEQ:YP_217560.1"
+ /note="involved in the de novo synthesis of pyridoxine
+ (Vitamin B6)"
+ /codon_start=1
+ /transl_table=11
+ /product="pyridoxine 5'-phosphate synthase"
+ /protein_id="YP_001569382.1"
+ /db_xref="GI:161502270"
+ /db_xref="InterPro:IPR004569"
+ /translation="MAELLLGVNIDHIATLRNARGTDYPDPVQAAFIAEQAGADGITV
+ HLREDRRHISDRDVRILRQTLHTRMNLEMAVTEEMLAIAVETRPHFCCLVPEKRQEVT
+ TEGGLDVAGQRDKMRDACSRLAAAGIQVSLFIDADEAQINAAAEVGAPFIEIHTGCYA
+ NAKTDAEQSKELARIASAATLAVRLGLKVNAGHGLTYHNVKAIAALPEMHELNIGHAI
+ IGRAVMSGLKEAVAEMKRLMLEARG"
+ misc_feature 294447..295148
+ /locus_tag="SARI_00300"
+ /note="Pyridoxine 5'-phosphate (PNP) synthase domain;
+ pyridoxal 5'-phosphate is the active form of vitamin
+ B6 that acts as an essential, ubiquitous coenzyme in amino
+ acid metabolism. In bacteria, formation of pyridoxine
+ 5'-phosphate is a step in...; Region: PNPsynthase;
+ cd00003"
+ /db_xref="CDD:237977"
+ misc_feature order(294459..294461,294465..294470,294492..294494,
+ 294567..294569,294573..294575,294585..294590,
+ 294648..294650,294738..294743,294750..294752,
+ 294831..294833,294891..294893,295011..295016,
+ 295077..295082)
+ /locus_tag="SARI_00300"
+ /note="active site"
+ /db_xref="CDD:237977"
+ misc_feature order(294459..294461,294561..294563,294636..294638,
+ 294642..294644,294648..294650,294702..294704,
+ 294708..294710,294825..294827,294831..294833,
+ 294885..294887,294891..294893,295002..295004,
+ 295011..295013,295062..295067,295071..295073)
+ /locus_tag="SARI_00300"
+ /note="hydrophilic channel; other site"
+ /db_xref="CDD:237977"
+ misc_feature order(294492..294494,294912..294917)
+ /locus_tag="SARI_00300"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:237977"
+ misc_feature order(294567..294569,294648..294650,294891..294893,
+ 295011..295013)
+ /locus_tag="SARI_00300"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:237977"
+ misc_feature 294720..294752
+ /locus_tag="SARI_00300"
+ /note="active site lid [active]"
+ /db_xref="CDD:237977"
+ gene 295166..295561
+ /gene="acpS"
+ /locus_tag="SARI_00301"
+ CDS 295166..295561
+ /gene="acpS"
+ /locus_tag="SARI_00301"
+ /inference="protein motif:BlastProDom:IPR004568"
+ /inference="protein motif:HMMPfam:IPR008278"
+ /inference="protein motif:HMMTigr:IPR002582"
+ /inference="protein motif:HMMTigr:IPR004568"
+ /inference="protein motif:superfamily:IPR008278"
+ /inference="similar to AA sequence:INSD:AAV76310.1"
+ /note="'Catalyzes the formation of holo-ACP, which
+ mediates the essential transfer of acyl fatty acid
+ intermediates during the biosynthesis of fatty acids and
+ lipids'"
+ /codon_start=1
+ /transl_table=11
+ /product="4'-phosphopantetheinyl transferase"
+ /protein_id="YP_001569383.1"
+ /db_xref="GI:161502271"
+ /db_xref="InterPro:IPR002582"
+ /db_xref="InterPro:IPR004568"
+ /db_xref="InterPro:IPR008278"
+ /translation="MAILGLGTDIVEISRIEAVISRSGERLARRVLSANEWAIWETHQ
+ QPVRFLAKRFAVKEAAAKAFGTGIRNGLAFNQFEVFNDELGKPRLRLWGEALTLAEKL
+ GVTHMHVTLADERHYACATVILESQISAG"
+ misc_feature 295169..295546
+ /gene="acpS"
+ /locus_tag="SARI_00301"
+ /note="4'-phosphopantetheinyl transferase;
+ Provisional; Region: acpS; PRK00070"
+ /db_xref="CDD:234610"
+ gene complement(295642..295911)
+ /locus_tag="SARI_00302"
+ CDS complement(295642..295911)
+ /locus_tag="SARI_00302"
+ /inference="protein motif:HMMPfam:IPR001450"
+ /inference="protein motif:ScanRegExp:IPR001450"
+ /inference="similar to AA sequence:INSD:CAD02778.1"
+ /note="'KEGG: bte:BTH_II0708 2.0e-06 fdxH; formate
+ dehydrogenase, beta subunit K00124;
+ COG: COG1145 Ferredoxin;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569384.1"
+ /db_xref="GI:161502272"
+ /db_xref="InterPro:IPR001450"
+ /translation="MALLITKKCINCDMCEPECPNEAISMGDSIYEINSDKCTECVGH
+ YETPTCQKVCPIPNTILQDPTHVETEEQLWDKFVLMHHADKLQAS"
+ misc_feature complement(295747..295887)
+ /locus_tag="SARI_00302"
+ /note="4Fe-4S dicluster domain; Region: Fer4_7; pfam12838"
+ /db_xref="CDD:221801"
+ gene complement(295967..296815)
+ /locus_tag="SARI_00303"
+ CDS complement(295967..296815)
+ /locus_tag="SARI_00303"
+ /inference="protein motif:HMMPfam:IPR000281"
+ /inference="protein motif:HMMPfam:IPR001347"
+ /inference="similar to AA sequence:INSD:AAX66473.1"
+ /note="'KEGG: bte:BTH_I1550 1.0e-22
+ glucokinase/transcriptional regulator, RpiR family, fusion
+ K00845;
+ COG: COG1737 Transcriptional regulators;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative DNA-binding transcriptional regulator"
+ /protein_id="YP_001569385.1"
+ /db_xref="GI:161502273"
+ /db_xref="InterPro:IPR000281"
+ /db_xref="InterPro:IPR001347"
+ /translation="MNCLIRIRQHYPDLAQSDKKLADYLLAQPDTARHLSSQQLAAEA
+ GISQSSVVKFAQKLGFKGFPALKLAISEALASNPNPHSIPVHNQIRGDDPMRLVGEKL
+ IKENVAAMHATLDVNSEEKLLESVAMLRHARRIVITGMGASGLVAQNFAWKLLKIGVN
+ AGVERDMHALLSTVQALAPGDLLLAISYSGERRELKLAADETLRTGAKILAITGFSPN
+ ALQQRATRCLYTIAEEQATRSAAISSTHAQMMLTDLLFMALVQQDLERAPERIRHSEA
+ LVKKLI"
+ misc_feature complement(296588..296815)
+ /locus_tag="SARI_00303"
+ /note="Helix-turn-helix domain, rpiR family; Region:
+ HTH_6; pfam01418"
+ /db_xref="CDD:201784"
+ misc_feature complement(295970..296803)
+ /locus_tag="SARI_00303"
+ /note="putative DNA-binding transcriptional regulator;
+ Provisional; Region: PRK11557"
+ /db_xref="CDD:183195"
+ misc_feature complement(296042..296458)
+ /locus_tag="SARI_00303"
+ /note="RpiR-like protein. RpiR contains a SIS (Sugar
+ ISomerase) domain, which is found in many phosphosugar
+ isomerases and phosphosugar binding proteins. In E. coli,
+ rpiR negatively regulates the expression of rpiB gene.
+ Both rpiB and rpiA are ribose phosphate...; Region:
+ SIS_RpiR; cd05013"
+ /db_xref="CDD:240144"
+ misc_feature complement(order(296255..296257,296387..296389))
+ /locus_tag="SARI_00303"
+ /note="putative active site [active]"
+ /db_xref="CDD:240144"
+ gene 296931..297824
+ /gene="murQ"
+ /locus_tag="SARI_00304"
+ CDS 296931..297824
+ /gene="murQ"
+ /locus_tag="SARI_00304"
+ /inference="protein motif:HMMPfam:IPR001347"
+ /inference="protein motif:HMMTigr:IPR005488"
+ /inference="protein motif:ScanRegExp:IPR005486"
+ /inference="similar to AA sequence:SwissProt:Q8ZN25"
+ /note="catalyzes the cleavage of the lactyl ether moiety
+ of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form
+ N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate;
+ involved in MurNAc dissimilation pathway"
+ /codon_start=1
+ /transl_table=11
+ /product="N-acetylmuramic acid-6-phosphate etherase"
+ /protein_id="YP_001569386.1"
+ /db_xref="GI:161502274"
+ /db_xref="InterPro:IPR001347"
+ /db_xref="InterPro:IPR005486"
+ /db_xref="InterPro:IPR005488"
+ /translation="MNLGALVSETRNPQTMDLDALPTPELVKRFNEQDTLVAEAVKAT
+ LTEVARAVDAAAAALQSGGRIIYMGAGTSGRLGVLDASECPPTFGVPHGLVVGLIAGG
+ PGALLKAVEGAEDSQQAGEDDLVALNLQEEDLVVGLAASGRTPYVIGGLRYARQSGCT
+ TVAVSCNPDSPIAREANIAISPVVGPEALTGSTRLKSGTAQKMVLNMISTGAMVKFGK
+ VYQNLMVDMKATNVKLVDRACRMVVEATGISREEAETLLKQTDFEVKPAILMALTGLD
+ AAAAREKLAAHQGFLRAALEH"
+ misc_feature 296931..297821
+ /gene="murQ"
+ /locus_tag="SARI_00304"
+ /note="N-acetylmuramic acid-6-phosphate etherase;
+ Reviewed; Region: murQ; PRK05441"
+ /db_xref="CDD:235467"
+ misc_feature 296970..297740
+ /gene="murQ"
+ /locus_tag="SARI_00304"
+ /note="N-acetylmuramic acid 6-phosphate etherase. Members
+ of this family contain the SIS (Sugar ISomerase) domain.
+ The SIS domain is found in many phosphosugar isomerases
+ and phosphosugar binding proteins. The bacterial cell wall
+ sugar N-acetylmuramic acid...; Region: SIS_Etherase;
+ cd05007"
+ /db_xref="CDD:240140"
+ misc_feature order(297147..297149,297345..297347)
+ /gene="murQ"
+ /locus_tag="SARI_00304"
+ /note="putative active site [active]"
+ /db_xref="CDD:240140"
+ gene 297914..298314
+ /locus_tag="SARI_00305"
+ /pseudogene="unknown"
+ gene 298318..298953
+ /locus_tag="SARI_00306"
+ CDS 298318..298953
+ /locus_tag="SARI_00306"
+ /inference="protein motif:HMMTigr:IPR006435"
+ /inference="similar to AA sequence:REFSEQ:NP_461504.1"
+ /note="'COG: COG0560 Phosphoserine phosphatase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569388.1"
+ /db_xref="GI:161502276"
+ /db_xref="InterPro:IPR006435"
+ /translation="MVSQERRVVFFDLDGTLHQQDMFGSFLRYLLRRQPLNALLVLPL
+ LPVIGLGLLAKGRAARWPMSLLLWGCTFGHSETRLQAHQADFVRWFRANVTAFPVVQE
+ RLTTYLLSSDADIWLITGSPQSLVEQVYFDTPWLPRVNLIASQMARRYGGWVLTVRCL
+ GHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTPHGELQQLE"
+ misc_feature 298318..298950
+ /locus_tag="SARI_00306"
+ /note="hypothetical protein; Provisional; Region:
+ PRK11590"
+ /db_xref="CDD:183218"
+ misc_feature 298330..298950
+ /locus_tag="SARI_00306"
+ /note="Phosphoserine phosphatase [Amino acid transport and
+ metabolism]; Region: SerB; COG0560"
+ /db_xref="CDD:223634"
+ gene 298978..299508
+ /locus_tag="SARI_00307"
+ CDS 298978..299508
+ /locus_tag="SARI_00307"
+ /inference="protein motif:HMMPfam:IPR002125"
+ /inference="protein motif:ScanRegExp:IPR002125"
+ /inference="similar to AA sequence:INSD:CAD02770.1"
+ /note="'KEGG: stt:t0289 3.5e-90 yfhC; hypothetical protein
+ K01500;
+ COG: COG0590 Cytosine/adenosine deaminases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="tRNA-specific adenosine deaminase"
+ /protein_id="YP_001569389.1"
+ /db_xref="GI:161502277"
+ /db_xref="InterPro:IPR002125"
+ /translation="MPPAFITGVTSLSDVELDHEYWMRHALTLAKRAWDEREVPVGAV
+ LVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVLQNYRLLDTTLYVTLEPCVMCA
+ GAMVHSRIRRVVFGARDAKTGAAGSLIDVLHHPGMNHRVEIIEGVLHDECAMLLSDFF
+ RMRRQEIKALKKAARA"
+ misc_feature 299044..299367
+ /locus_tag="SARI_00307"
+ /note="Nucleoside deaminases include adenosine, guanine
+ and cytosine deaminases. These enzymes are Zn dependent
+ and catalyze the deamination of nucleosides. The zinc ion
+ in the active site plays a central role in the proposed
+ catalytic mechanism, activating a...; Region:
+ nucleoside_deaminase; cd01285"
+ /db_xref="CDD:238612"
+ misc_feature order(299098..299100,299146..299148,299179..299187,
+ 299269..299271,299278..299280)
+ /locus_tag="SARI_00307"
+ /note="nucleoside/Zn binding site; other site"
+ /db_xref="CDD:238612"
+ misc_feature order(299173..299175,299188..299190,299200..299202,
+ 299272..299277,299284..299289,299296..299301)
+ /locus_tag="SARI_00307"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238612"
+ misc_feature order(299179..299187,299266..299271,299278..299280)
+ /locus_tag="SARI_00307"
+ /note="catalytic motif [active]"
+ /db_xref="CDD:238612"
+ gene complement(299544..301088)
+ /locus_tag="SARI_00308"
+ CDS complement(299544..301088)
+ /locus_tag="SARI_00308"
+ /inference="protein motif:HMMPfam:IPR008258"
+ /inference="protein motif:HMMSmart:IPR001638"
+ /inference="protein motif:ScanRegExp:IPR000189"
+ /inference="similar to AA sequence:REFSEQ:NP_461502.1"
+ /note="'YfhD; uncharacterized member of the
+ transglycosylase slt family; part of the rob operon, which
+ plays a role in cellular resistance to antibiotics,
+ bactericidal agents, and organic solvents; unknown
+ function'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative transglycosylase"
+ /protein_id="YP_001569390.1"
+ /db_xref="GI:161502278"
+ /db_xref="InterPro:IPR000189"
+ /db_xref="InterPro:IPR001638"
+ /db_xref="InterPro:IPR008258"
+ /translation="MKKLKINYLFIGILTLLLAAALWPSIPWFGKTENHVAAIQARGV
+ LRVSTIDSPLTYAVVNGKKYGLDYELAQQFANYLGVKLKITVRQNISQLFDDLDNGNA
+ DLLAAGLVYDSARVKKYQPGPMYYSVSQQLVYRVGQYRPRSLATVTENQLTIAPGHVV
+ VNDLQRLKETKFPDLSWKVDDKKGSTTLLEDVINGKLDYTIADSVAISLFQRVHPELA
+ VALDVTDEQPVTWFSRLDDDNTLSAALLDFFNSINEDGSLARIEEKYLGHGDDFDYVD
+ TRSFLRAVDNVLPELEALFKKYAKEIDWRLLAAISYQESHWDPQATSPTGVRGLMMLT
+ KNTAQSLGLTDRTDAEQSISGGARYLEDMMAKVPETVPEDERIWFALAAYNMGYAHML
+ DARALTVKTKGNPDSWTDVKQRLPLLSQKPYYSKLTYGYARGHEAYAYVENIRKYQIS
+ LVGYLQEKEKQEAEAMKLAQDYPAASPEELNKAPFPFISFLSQSSGYLTHSPSLLFTP
+ QKKEEK"
+ misc_feature complement(299643..301088)
+ /locus_tag="SARI_00308"
+ /note="membrane-bound lytic transglycosylase F;
+ Provisional; Region: PRK10859"
+ /db_xref="CDD:236778"
+ misc_feature complement(300291..300950)
+ /locus_tag="SARI_00308"
+ /note="Bacterial periplasmic transport systems use
+ membrane-bound complexes and substrate-bound,
+ membrane-associated, periplasmic binding proteins (PBPs)
+ to transport a wide variety of substrates, such as, amino
+ acids, peptides, sugars, vitamins and inorganic...;
+ Region: PBPb; cd00134"
+ /db_xref="CDD:238078"
+ misc_feature complement(order(300480..300482,300588..300590,
+ 300744..300746,300819..300821,300936..300938))
+ /locus_tag="SARI_00308"
+ /note="substrate binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:238078"
+ misc_feature complement(order(300501..300503,300519..300521,
+ 300531..300533))
+ /locus_tag="SARI_00308"
+ /note="membrane-bound complex binding site; other site"
+ /db_xref="CDD:238078"
+ misc_feature complement(300396..300413)
+ /locus_tag="SARI_00308"
+ /note="hinge residues; other site"
+ /db_xref="CDD:238078"
+ misc_feature complement(299901..300179)
+ /locus_tag="SARI_00308"
+ /note="Lytic Transglycosylase (LT) and Goose Egg White
+ Lysozyme (GEWL) domain. Members include the soluble and
+ insoluble membrane-bound LTs in bacteria, the LTs in
+ bacteriophage lambda, as well as, the eukaryotic
+ "goose-type" lysozymes (GEWL). LTs...; Region:
+ LT_GEWL; cd00254"
+ /db_xref="CDD:238157"
+ misc_feature complement(order(299937..299939,300012..300014,
+ 300087..300089,300147..300149))
+ /locus_tag="SARI_00308"
+ /note="N-acetyl-D-glucosamine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:238157"
+ misc_feature complement(300147..300149)
+ /locus_tag="SARI_00308"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:238157"
+ gene complement(301093..301230)
+ /locus_tag="SARI_00309"
+ CDS complement(301093..301230)
+ /locus_tag="SARI_00309"
+ /inference="similar to AA sequence:REFSEQ:YP_217548.1"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569391.1"
+ /db_xref="GI:161502279"
+ /translation="MSYGAAIDANKLPTGALLRKMPLIDDLSIAAQHLFQPEATHDPE
+ N"
+ gene 301344..305231
+ /locus_tag="SARI_00310"
+ CDS 301344..305231
+ /locus_tag="SARI_00310"
+ /inference="protein motif:HMMPfam:IPR000728"
+ /inference="protein motif:HMMPfam:IPR010918"
+ /inference="protein motif:HMMTigr:IPR010073"
+ /note="catalyzes the formation of
+ 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from
+ N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and
+ L-glutamine in purine biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphoribosylformylglycinamidine synthase"
+ /protein_id="YP_001569392.1"
+ /db_xref="GI:161502280"
+ /db_xref="InterPro:IPR000728"
+ /db_xref="InterPro:IPR010073"
+ /db_xref="InterPro:IPR010918"
+ /translation="MMEILRGSPALSAFRINKLLARFQAARLQVHNIYAEYVHFADLN
+ APLNDNEQAQLTRLLQYGPALSSHTPTGKLLLVTPRPGTISPWSSKATDIAHNCGLQQ
+ VDRLERGVAYYIEASTLTAEQWRQVAAELHDRMMETVFSSLTDAEKLFIHHQPAPVSS
+ VDLLAEGRQALIAANLRLGLALAEDEIDYLQAAFTKLGRNPNDIELYMFAQANSEHCR
+ HKIFNADWIIDGKPQPKSLFKMIKNTFETTPDHVLSAYKDNAAVMEGSAVGRYFADHN
+ TGRYDFHQEPAHILMKVETHNHPTAISPWPGAATGSGGEIRDEGATGRGAKPKAGLVG
+ FSVSNLRIPGFEQPWEEDFGKPERIVTALDIMTEGPLGGAAFNNEFGRPALTGYFRTY
+ EEKVNSHNGEELRGYHKPIMLAGGIGNIRADHVQKGEIVVGAKLIVLGGPAMNIGLGG
+ GAASSMASGQSDADLDFASVQRDNPEMERRCQEVIDRCWQLGDANPILFIHDVGAGGL
+ SNAMPELVSDGGRGGKFELRDILSDEPGMSPLEIWCNESQERYVLAVAADQLPLFDKL
+ CKRERAPYAVIGEATEEQHLSLHDNHFDNQPIDLPLDVLLGKTPKMTRDVQTLKAKGD
+ ALNRADITIADAVNRVLHLPTVAEKTFLVTIGDRTVTGMVARDQMVGPWQVPVADCAV
+ TTASLDSYYGEAMSIGERAPVALLDFAASARLAVGEALTNIAATQIGDIKRIKLSANW
+ MAAAGHPGEDAGLYDAVKAIGEEMCPQLGLTIPVGKDSMSMKTRWQEGNEQREMTSPL
+ SLVISAFARVEDVRHTITPQLSTEDNVLLLIDLGKGHSALGATALAQVYRQLGDTPAD
+ VRDVAQLKGFYEAIQALVAARKLLAYHDRSDGGLLVTLAEMAFAGHCGVQVDIAALGD
+ DHLAALFNEELGGVIQVRAEDRDAVEALLAQYGLADCVHYLGQALAGDRFVITAHDQT
+ VFSESRTTLRVWWAETTWQMQRLRDNPQCADQEHEEKANDADPGLNVKLSFDINEDIA
+ APYIATGARPKVAVLREQGVNSHVEMAAAFHRAGFDAIDVHMSDLLGGRIGLGNFQAL
+ VACGGFSYGDVLGAGEGWAKSILFNHRVRDEFETFFHRPQTLALGVCNGCQMMSNLRE
+ LIPGSELWPRFMRNHSDRFEARFSLVEVTQSPSLLLQGMVGSQMPIAVSHGEGRVEVR
+ DDAHLAALESKGLVALRYVDNFGKVTETYPANPNGSPNGITAVTNENGRVTIMMPHPE
+ RVFRTVANSWHPENWGEDSPWMRIFRNARKQLG"
+ misc_feature 301347..305228
+ /locus_tag="SARI_00310"
+ /note="phosphoribosylformylglycinamidine synthase;
+ Provisional; Region: PRK05297"
+ /db_xref="CDD:235394"
+ misc_feature 301956..303143
+ /locus_tag="SARI_00310"
+ /note="PurL subunit of the formylglycinamide
+ ribonucleotide amidotransferase (FGAR-AT), first repeat.
+ FGAR-AT catalyzes the ATP-dependent conversion of
+ formylglycinamide ribonucleotide (FGAR) and glutamine to
+ formylglycinamidine ribonucleotide (FGAM), ADP; Region:
+ PurL_repeat1; cd02203"
+ /db_xref="CDD:100034"
+ misc_feature order(302205..302216,302220..302222,302295..302297,
+ 302331..302333,302340..302342,302349..302351,
+ 302505..302507,302571..302576,302586..302588)
+ /locus_tag="SARI_00310"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:100034"
+ misc_feature order(302283..302285,302295..302297,302499..302507)
+ /locus_tag="SARI_00310"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:100034"
+ misc_feature 303414..304217
+ /locus_tag="SARI_00310"
+ /note="Formylglycinamide ribonucleotide amidotransferase
+ (FGAR-AT) catalyzes the ATP-dependent conversion of
+ formylglycinamide ribonucleotide (FGAR) and glutamine to
+ formylglycinamidine ribonucleotide (FGAM), ADP, phosphate,
+ and glutamate in the fourth step of...; Region: PurL;
+ cd02193"
+ /db_xref="CDD:100029"
+ misc_feature order(303417..303428,303432..303434,303507..303509,
+ 303546..303548,303555..303557,303564..303566,
+ 303669..303671,303735..303740,303750..303752)
+ /locus_tag="SARI_00310"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:100029"
+ misc_feature order(303495..303497,303507..303509,303663..303671)
+ /locus_tag="SARI_00310"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:100029"
+ misc_feature 304467..305216
+ /locus_tag="SARI_00310"
+ /note="Type 1 glutamine amidotransferase (GATase1)-like
+ domain found in Formylglycinamide ribonucleotide
+ amidotransferase; Region: GATase1_FGAR_AT; cd01740"
+ /db_xref="CDD:153211"
+ misc_feature order(304620..304625,304635..304637,304746..304748,
+ 304758..304760,304926..304931,305115..305117,
+ 305121..305132)
+ /locus_tag="SARI_00310"
+ /note="putative active site [active]"
+ /db_xref="CDD:153211"
+ misc_feature order(304746..304748,305121..305123,305127..305129)
+ /locus_tag="SARI_00310"
+ /note="catalytic triad [active]"
+ /db_xref="CDD:153211"
+ gene complement(305504..305652)
+ /locus_tag="SARI_00311"
+ misc_RNA complement(305504..305652)
+ /locus_tag="SARI_00311"
+ /product="tke1 RNA"
+ /inference="nucleotide motif:Rfam:RF00128"
+ /note="Rfam score 177.53"
+ gene 305792..307177
+ /locus_tag="SARI_00312"
+ CDS 305792..307177
+ /locus_tag="SARI_00312"
+ /inference="protein motif:FPrintScan:IPR004358"
+ /inference="protein motif:Gene3D:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003660"
+ /inference="protein motif:HMMPfam:IPR003661"
+ /inference="protein motif:HMMSmart:IPR003594"
+ /inference="protein motif:HMMSmart:IPR003661"
+ /inference="protein motif:superfamily:IPR003594"
+ /inference="protein motif:superfamily:IPR009082"
+ /inference="similar to AA sequence:REFSEQ:YP_217546.1"
+ /note="'KEGG: sec:SC2559 8.7e-236 yfhK; putative sensory
+ kinase in regulatory system K07711;
+ COG: COG0642 Signal transduction histidine kinase;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569393.1"
+ /db_xref="GI:161502281"
+ /db_xref="InterPro:IPR003594"
+ /db_xref="InterPro:IPR003660"
+ /db_xref="InterPro:IPR003661"
+ /db_xref="InterPro:IPR004358"
+ /db_xref="InterPro:IPR009082"
+ /translation="MLAFLLILLPLLVLAWQAWQSLNALSDQAAVTNRSTLIDARRSE
+ AMTNVALEMERSYRQYCVLDDPTLAKVYQSQRKRYSDMLDAHAGVLPDDKLYQALRQD
+ LNALAQLQCKDSGPEAAAAARLEAFANANTEMVQATRTVVYSRGQQLQQEIAERGQFF
+ GWQALVLFLVSLAMVLLFTRMIIGPVKGIERMINRLGEGHSLGNTVTFTGPRELRSVG
+ QRIIWLSERLAWLESQRHQFLRHLSHELKTPLASMREGTELLADRVVGPLTPEQKEVV
+ DILDVSSRNLQKLIEQLLDYNRKLVDSATELETVDIAPLVDMVVSAHSLPARAKMMHT
+ DVDLEVERCIAEPMLLMSVLDNLYSNAVHYGAESGNICIRSRSQGSMVYIDVINSGEP
+ IPQTESEMIFEPFFQGSHQRKGAVKGSGLGLSIARDCIRRMQGEIRLVDANAQEVCFR
+ ISLPLPASDKH"
+ misc_feature 306188..307174
+ /locus_tag="SARI_00312"
+ /note="Signal transduction histidine kinase [Signal
+ transduction mechanisms]; Region: BaeS; COG0642"
+ /db_xref="CDD:223715"
+ misc_feature 306269..306475
+ /locus_tag="SARI_00312"
+ /note="HAMP domain; Region: HAMP; pfam00672"
+ /db_xref="CDD:216054"
+ misc_feature 306485..306685
+ /locus_tag="SARI_00312"
+ /note="Histidine Kinase A (dimerization/phosphoacceptor)
+ domain; Histidine Kinase A dimers are formed through
+ parallel association of 2 domains creating 4-helix
+ bundles; usually these domains contain a conserved His
+ residue and are activated via...; Region: HisKA; cd00082"
+ /db_xref="CDD:119399"
+ misc_feature order(306503..306505,306515..306517,306527..306529,
+ 306536..306538,306548..306550,306557..306559,
+ 306614..306616,306626..306628,306635..306637,
+ 306647..306649,306656..306658,306668..306670)
+ /locus_tag="SARI_00312"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119399"
+ misc_feature 306521..306523
+ /locus_tag="SARI_00312"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:119399"
+ misc_feature 306839..307150
+ /locus_tag="SARI_00312"
+ /note="Histidine kinase-like ATPases; This family includes
+ several ATP-binding proteins for example: histidine
+ kinase, DNA gyrase B, topoisomerases, heat shock protein
+ HSP90, phytochrome-like ATPases and DNA mismatch repair
+ proteins; Region: HATPase_c; cd00075"
+ /db_xref="CDD:238030"
+ misc_feature order(306857..306859,306869..306871,306878..306880,
+ 306947..306949,306953..306955,306959..306961,
+ 306965..306970,307049..307060,307106..307108,
+ 307112..307114,307127..307132,307136..307138)
+ /locus_tag="SARI_00312"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature 306869..306871
+ /locus_tag="SARI_00312"
+ /note="Mg2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature order(306959..306961,306965..306967,307049..307051,
+ 307055..307057)
+ /locus_tag="SARI_00312"
+ /note="G-X-G motif; other site"
+ /db_xref="CDD:238030"
+ unsure 306884..307026
+ /locus_tag="SARI_00312"
+ /note="Sequence derived from one plasmid subclone"
+ gene 307179..307937
+ /locus_tag="SARI_00313"
+ CDS 307179..307937
+ /locus_tag="SARI_00313"
+ /inference="similar to AA sequence:REFSEQ:NP_804169.1"
+ /note="'COG: NOG06210 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569394.1"
+ /db_xref="GI:161502282"
+ /translation="MNLSLVSMPHVLVQTIKRCLFRGVIPASISCLALAACVPYTVQQ
+ RPGSAAQDKLPHYQLADYLPTACADIWSLRGQSVDTNPLYWLRAIDCAERLMPVQSRA
+ EARALTDDNWQTAFRRGILLADAKITPPERRAIVSRLEALSAQIPAQVRPVYQIWHDG
+ QALQLALSAERQRYSKLQQTSDSELDALRQQQQALQTQLELTTRKLESLTDIERQLST
+ RKPAENYNADTSHTNDKPATSEDGAAPSQDEVTP"
+ misc_feature 307200..307934
+ /locus_tag="SARI_00313"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10722"
+ /db_xref="CDD:236745"
+ gene 307934..309271
+ /locus_tag="SARI_00314"
+ CDS 307934..309271
+ /locus_tag="SARI_00314"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:HMMPfam:IPR001789"
+ /inference="protein motif:HMMPfam:IPR002078"
+ /inference="protein motif:HMMSmart:IPR001789"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR002078"
+ /inference="protein motif:superfamily:IPR011006"
+ /inference="similar to AA sequence:REFSEQ:NP_461497.1"
+ /note="'KEGG: eci:UTI89_C2502 1.2e-82 atoC; acetoacetate
+ metabolism regulatory protein AtoC K07714;
+ COG: COG2204 Response regulator containing CheY-like
+ receiver, AAA-type ATPase, and DNA-binding domains;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569395.1"
+ /db_xref="GI:161502283"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR002078"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR011006"
+ /translation="MISRKPAHLLLVDDDPGLLKLLGMRLASEGYSVVTAESGQEGLR
+ ILNREKVDLVISDLRMDEMDGMQLFTEIQKVQPGMPVIILTAHGSIPDAVAATQKGVF
+ SFLTKPIDKDALYKAIDEALEQTAPATDDSWRKPIVTRSPLMLRLLEQAHMVAQSDVS
+ VLINGQSGTGKEIFAQAIHNASPRSNKPFVAINCGALPEQLLESELFGHARGAFTGAV
+ SNREGLFQAAEGGTLFLDEIGDMPTPLQVKLLRVLQERKVRPLGSNRDIDIDVRIISA
+ THRDLPKAMARGEFREDLYYRLNVVSLKIPALAERTEDIPLLANHLLRQSAQRHKPFV
+ RAFSTDAMKRLMTASWPGNVRQLVNVIEQCVALTSSPVISDALVEQALEGENTALPTF
+ AEARNQFELNYLRKLLQITKGNVTHAARMAGRNRTEFYKLLSRHELDANDFKE"
+ misc_feature 307940..309268
+ /locus_tag="SARI_00314"
+ /note="response regulator GlrR; Provisional; Region:
+ PRK15115"
+ /db_xref="CDD:185070"
+ misc_feature 307961..308299
+ /locus_tag="SARI_00314"
+ /note="Signal receiver domain; originally thought to be
+ unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
+ recently identified in eukaroytes ETR1 Arabidopsis
+ thaliana; this domain receives the signal from the sensor
+ partner in a two-component systems; Region: REC; cd00156"
+ /db_xref="CDD:238088"
+ misc_feature order(307970..307975,308102..308104,308126..308128,
+ 308186..308188,308243..308245,308252..308257)
+ /locus_tag="SARI_00314"
+ /note="active site"
+ /db_xref="CDD:238088"
+ misc_feature 308102..308104
+ /locus_tag="SARI_00314"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238088"
+ misc_feature order(308111..308116,308120..308128)
+ /locus_tag="SARI_00314"
+ /note="intermolecular recognition site; other site"
+ /db_xref="CDD:238088"
+ misc_feature 308252..308260
+ /locus_tag="SARI_00314"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238088"
+ misc_feature 308357..308836
+ /locus_tag="SARI_00314"
+ /note="The AAA+ (ATPases Associated with a wide variety of
+ cellular Activities) superfamily represents an ancient
+ group of ATPases belonging to the ASCE (for additional
+ strand, catalytic E) division of the P-loop NTPase fold.
+ The ASCE division also includes ABC; Region: AAA; cd00009"
+ /db_xref="CDD:99707"
+ misc_feature 308426..308449
+ /locus_tag="SARI_00314"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature order(308429..308452,308639..308641,308765..308767)
+ /locus_tag="SARI_00314"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:99707"
+ misc_feature 308627..308644
+ /locus_tag="SARI_00314"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature 308822..308824
+ /locus_tag="SARI_00314"
+ /note="arginine finger; other site"
+ /db_xref="CDD:99707"
+ gene 309348..309686
+ /locus_tag="SARI_00315"
+ CDS 309348..309686
+ /locus_tag="SARI_00315"
+ /inference="protein motif:BlastProDom:IPR002187"
+ /inference="protein motif:FPrintScan:IPR002187"
+ /inference="protein motif:Gene3D:IPR002187"
+ /inference="protein motif:HMMPfam:IPR002187"
+ /inference="protein motif:ScanRegExp:IPR002187"
+ /inference="protein motif:ScanRegExp:IPR002332"
+ /inference="similar to AA sequence:INSD:ABB67124.1"
+ /note="'indirectly regulates nitrogen metabolism; at high
+ nitrogen levels P-II prevents the phosphorylation of NR-I,
+ the transcriptional activator of the glutamine synthetase
+ gene (glnA); at low nitrogen levels P-II is uridylylated
+ to form PII-UMP and interacts with an adenylyltransferase
+ (GlnE) that activates GlnA'"
+ /codon_start=1
+ /transl_table=11
+ /product="nitrogen regulatory protein P-II 1"
+ /protein_id="YP_001569396.1"
+ /db_xref="GI:161502284"
+ /db_xref="InterPro:IPR002187"
+ /db_xref="InterPro:IPR002332"
+ /translation="MKKIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTE
+ LYRGAEYMVDFLPKVKIEIVVPDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRI
+ RTGEEDDAAI"
+ misc_feature 309348..309683
+ /locus_tag="SARI_00315"
+ /note="nitrogen regulatory protein P-II 1; Provisional;
+ Region: PRK10858"
+ /db_xref="CDD:182784"
+ misc_feature 309357..309662
+ /locus_tag="SARI_00315"
+ /note="Nitrogen regulatory protein P-II; Region: P-II;
+ smart00938"
+ /db_xref="CDD:198006"
+ unsure 309586..309763
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(309735..311195)
+ /locus_tag="SARI_00316"
+ CDS complement(309735..311195)
+ /locus_tag="SARI_00316"
+ /inference="protein motif:HMMPanther:IPR000109"
+ /inference="protein motif:HMMPanther:IPR005279"
+ /inference="protein motif:HMMPfam:IPR000109"
+ /inference="protein motif:HMMTigr:IPR005279"
+ /inference="protein motif:ScanRegExp:IPR000109"
+ /inference="similar to AA sequence:REFSEQ:NP_461495.1"
+ /note="'COG: COG3104 Dipeptide/tripeptide permease;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569397.1"
+ /db_xref="GI:161502285"
+ /db_xref="InterPro:IPR000109"
+ /db_xref="InterPro:IPR005279"
+ /translation="MKTPSQPRAIFYIVAIQIWEYFSFYGMRALLILYLTHQLGFNDS
+ HAINLFSAYASLVYVTPILGGWLADRLLGNRVAVITGALLMTLGHVVLGLESDSTLSL
+ YAALAIIICGYGLFKSNISCLLGELYAPDDSRRDGGFSLLYAAGNIGSIAAPIACGLA
+ AQWYGWHVGFALAGVGMFIGLLIFLSGHRHFQQTRGVNRPALRAVKFALPTWSWLVLM
+ LCVAPVFFTLLLENNWSGYVLAIVCAFAAQLIARIMVKFPEHRRALWQIVLLMITGTL
+ FWVLAQQGGSSISLFIDRFVNRQWLHMTVPTALFQSVNAIAVMAAGVMLAWLSSPKES
+ ARSVLRVWLKFAVGLALMGGGFMLLALNAHQARLDGQASMGMMIAGLAMMGFAELFID
+ PVAMAQITRLNLPGVTGVLTGIYMLATGAVANWLAGVVAQQTTESQISDTAVAAYGHF
+ FSQMGEWTLSCVALIVAIVGLRWLCNRTTSALPQGD"
+ misc_feature complement(309789..311195)
+ /locus_tag="SARI_00316"
+ /note="Dipeptide/tripeptide permease [Amino acid transport
+ and metabolism]; Region: PTR2; COG3104"
+ /db_xref="CDD:225646"
+ misc_feature complement(<310641..311168)
+ /locus_tag="SARI_00316"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature complement(order(310746..310748,310764..310769,
+ 310776..310781,310821..310823,310830..310835,
+ 310842..310847,310854..310859,311001..311006,
+ 311010..311015,311025..311027,311034..311039,
+ 311046..311048,311100..311105,311109..311117,
+ 311124..311126))
+ /locus_tag="SARI_00316"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ misc_feature complement(309927..310973)
+ /locus_tag="SARI_00316"
+ /note="POT family; Region: PTR2; pfam00854"
+ /db_xref="CDD:216153"
+ gene complement(311251..313395)
+ /locus_tag="SARI_00317"
+ CDS complement(311251..313395)
+ /locus_tag="SARI_00317"
+ /inference="protein motif:HMMPfam:IPR000310"
+ /inference="protein motif:HMMPfam:IPR005308"
+ /inference="protein motif:HMMPfam:IPR008286"
+ /inference="protein motif:HMMPIR:IPR011193"
+ /inference="protein motif:ScanRegExp:IPR000310"
+ /inference="protein motif:superfamily:IPR008286"
+ /note="'KEGG: stt:t0297 0. cadA; lysine decarboxylase
+ K01582;
+ COG: COG1982 Arginine/lysine/orniTHIne decarboxylases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569398.1"
+ /db_xref="GI:161502286"
+ /db_xref="InterPro:IPR000310"
+ /db_xref="InterPro:IPR005308"
+ /db_xref="InterPro:IPR008286"
+ /db_xref="InterPro:IPR011193"
+ /translation="MNVIAIMNHMGVYFKEEPIRELHRALEGLNFRIVYPNDREDLLK
+ LIENNARLCGVIFDWDKYNLELCEEISKLNEYMPLYAFANSYSTLDVSLNDLRMQVRF
+ FEYALGAAADIAAKIRQNTDEYIDNILPPLTKALFKYVREGKYTFCTPGHMGGTAFQK
+ SPVGSIFYDFFGPNTMKSDISISVSELGSLLDHSGPHKEAEEYIARVFNAERSYMVTN
+ GTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDITPIYFRPTRNAYGILGGIP
+ QSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDYIKKTLDVKSIHFDSAWV
+ PYTNFSPIYEGKCGMSGDRVEGKIIYETQSTHKLLAAFSQASMIHVKGDINEETFNEA
+ YMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLKSESDGWF
+ FDVWQPEHIDGAECWPLRSDSAWHGFKNIDNEHMYLDPIKVTILTPGMKKDGTMDEFG
+ IPASLVAKYLDERGIIVEKTGPYNLLFLFSIGIDKTKALSLLRALTEFKRAFDLNLRV
+ KNILPALYREAPEFYENMRIQELAQNIHKLVEHHNLPDLMYRAFEVLPKMVMTPYTAF
+ QKELHGETEEVYLEEMVGRVNANMILPYPPGVPLVMPGEMITEESRPVLEFLQMLCEI
+ GAHYPGFETDIHGAYRQADGRYTVKVLKENTK"
+ misc_feature complement(311254..313395)
+ /locus_tag="SARI_00317"
+ /note="lysine decarboxylase CadA; Provisional; Region:
+ PRK15400"
+ /db_xref="CDD:185298"
+ misc_feature complement(313024..313356)
+ /locus_tag="SARI_00317"
+ /note="Orn/Lys/Arg decarboxylase, N-terminal domain;
+ Region: OKR_DC_1_N; pfam03709"
+ /db_xref="CDD:217683"
+ misc_feature complement(312073..313005)
+ /locus_tag="SARI_00317"
+ /note="Ornithine decarboxylase family. This family belongs
+ to pyridoxal phosphate (PLP)-dependent aspartate
+ aminotransferase superfamily (fold I). The major groups in
+ this CD corresponds to ornithine decarboxylase (ODC),
+ arginine decarboxylase (ADC) and lysine...; Region:
+ Orn_deC_like; cd00615"
+ /db_xref="CDD:99739"
+ misc_feature complement(order(312121..312126,312163..312165,
+ 312172..312174,312181..312183,312202..312204,
+ 312208..312216,312220..312225,312274..312288,
+ 312295..312300,312658..312663,312694..312699,
+ 312703..312711,312721..312723,312730..312735,
+ 312739..312747,312820..312822,312844..312846,
+ 312859..312861))
+ /locus_tag="SARI_00317"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99739"
+ misc_feature complement(order(312295..312300,312304..312306,
+ 312397..312402,312406..312408,312484..312486,
+ 312655..312657,312661..312663,312733..312741))
+ /locus_tag="SARI_00317"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:99739"
+ misc_feature complement(312295..312297)
+ /locus_tag="SARI_00317"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:99739"
+ misc_feature complement(311284..311688)
+ /locus_tag="SARI_00317"
+ /note="Orn/Lys/Arg decarboxylase, C-terminal domain;
+ Region: OKR_DC_1_C; pfam03711"
+ /db_xref="CDD:112521"
+ gene complement(313478..314815)
+ /gene="cadB"
+ /locus_tag="SARI_00318"
+ CDS complement(313478..314815)
+ /gene="cadB"
+ /locus_tag="SARI_00318"
+ /inference="protein motif:HMMPanther:IPR002293"
+ /inference="protein motif:HMMPfam:IPR004841"
+ /inference="similar to AA sequence:REFSEQ:NP_461493.1"
+ /note="antiporter protein responsible for lysine import
+ and cadaverine export; member of the lysine-dependent acid
+ resistance system 4 (AR4); inner membrane protein"
+ /codon_start=1
+ /transl_table=11
+ /product="lysine/cadaverine antiporter"
+ /protein_id="YP_001569399.1"
+ /db_xref="GI:161502287"
+ /db_xref="InterPro:IPR002293"
+ /db_xref="InterPro:IPR004841"
+ /translation="MNMSSVKKIGLFACTGVVAGNMMGSGIALLPANLASIGGIAIWG
+ WVISIIGAMSLAYVYARLATKNPQQGGPIAYAGEISPAFGFQTGVLYYHANWIGNLAI
+ GITAVSYLSTFFPALNNPIPAGIACIAIVWLFTFINMLGGAWVSRLTTIGLFLVLIPV
+ VLTAVAGWHWFDIATYHANWNTSTTTDSHAIVKSILLCLWAFVGVESAAVSTGMVKNP
+ KRTVPLATMLGTALAGIIYIAATQVIAGMFPASVMASSGAPFAISTSTILGGWAAPLV
+ SAFTAFACLTSLGSWMMLVGQAGVRAANDGNFPKIYGEIDKNGIPKKGLLLAAVKMTA
+ LMILITIMNSSGGKASDLFGELTGIAVLLTMLPYFYSCVDLIRFEGFNIRNSVSLICS
+ VLGCAFCFIALMGASSFELSGTFIVSLIILMFYGRKMHQRQNNDSENNTVEAL"
+ misc_feature complement(313505..314809)
+ /gene="cadB"
+ /locus_tag="SARI_00318"
+ /note="lysine/cadaverine antiporter; Provisional; Region:
+ cadB; PRK10435"
+ /db_xref="CDD:182458"
+ gene complement(315168..316706)
+ /locus_tag="SARI_00319"
+ CDS complement(315168..316706)
+ /locus_tag="SARI_00319"
+ /inference="protein motif:BlastProDom:IPR001867"
+ /inference="protein motif:Gene3D:IPR011990"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR001867"
+ /inference="similar to AA sequence:INSD:CAD02760.1"
+ /note="regulates the cadBA operon"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional activator CadC"
+ /protein_id="YP_001569400.1"
+ /db_xref="GI:161502288"
+ /db_xref="InterPro:IPR001867"
+ /db_xref="InterPro:IPR011990"
+ /db_xref="InterPro:IPR011991"
+ /translation="MQQPVVRIGEWLVTPSVNQISRQGRQITLEPRLIDLLMYFAHHP
+ DEVLSRDNIIDHVWMRTIVTNHVVTQSISELRKSLRDGGDSNAEYIVTVPKRGYKLTA
+ PVIWCEENSDEIDNASTSPSIASTLTEPTDVIPAAPPAAPPPLQASTKKARRPRIAAF
+ WTWFMFLLSLATLVVFIVMSVVDHNAAVTKTRLLLNPRDIDVRFEGGNSCNNWLSQES
+ YAIGLGGLITDLLNTYSTFMVHDKTNYRVNEPSSSGKTLTIQFVNQRHYRAQQCFMSV
+ VLIDNADGSTMLDKRYFVTNTNQLSIQDDLFNSLSFVLTQPWPDRMREQLALFRTPQN
+ TALMHFYEARQLILSGDAQALSKASDILNGIIKETPDFKYAYEYKVLVDVLRQSQQPF
+ DKKRMAALNEEFKEIDQIPGVKKTSVYYKIKTVDLLGKGDIDAAYEEINKSIELEMSW
+ FNYVLLGKVYEMKGENRLAADAYLTAFNLRPGENTLYWIENGVFQTSVQKIVPYLNSF
+ LAED"
+ misc_feature complement(315171..316706)
+ /locus_tag="SARI_00319"
+ /note="DNA-binding transcriptional activator CadC;
+ Provisional; Region: PRK10153"
+ /db_xref="CDD:236658"
+ misc_feature complement(316407..316691)
+ /locus_tag="SARI_00319"
+ /note="Effector domain of response regulator. Bacteria and
+ certain eukaryotes like protozoa and higher plants use
+ two-component signal transduction systems to detect and
+ respond to changes in the environment. The system consists
+ of a sensor histidine kinase and...; Region: trans_reg_C;
+ cd00383"
+ /db_xref="CDD:238225"
+ misc_feature complement(order(316416..316418,316431..316433,
+ 316470..316475,316497..316499,316506..316508,
+ 316557..316562,316617..316619))
+ /locus_tag="SARI_00319"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:238225"
+ gene complement(316887..318077)
+ /locus_tag="SARI_00320"
+ CDS complement(316887..318077)
+ /locus_tag="SARI_00320"
+ /inference="protein motif:Gene3D:IPR012292"
+ /inference="protein motif:HMMPfam:IPR000971"
+ /inference="protein motif:HMMPfam:IPR001433"
+ /inference="protein motif:HMMPfam:IPR008333"
+ /inference="protein motif:superfamily:IPR009050"
+ /inference="similar to AA sequence:INSD:AAV76329.1"
+ /note="flavohemoprotein; catalyzes the formation of
+ nitrate from nitric oxide; can also catalyze the reduction
+ of dihydropteridine"
+ /codon_start=1
+ /transl_table=11
+ /product="nitric oxide dioxygenase"
+ /protein_id="YP_001569401.1"
+ /db_xref="GI:161502289"
+ /db_xref="InterPro:IPR000971"
+ /db_xref="InterPro:IPR001433"
+ /db_xref="InterPro:IPR008333"
+ /db_xref="InterPro:IPR009050"
+ /db_xref="InterPro:IPR012292"
+ /translation="MLDAQTIATVKATIPLLVETGPKLTAHFYDRMFTHNPELKEIFN
+ MSNQRNGDQREALFNAIAAYASNIENLPALLPAVEKIAQKHTSFQIKPEQYNIVGTHL
+ LATLDEMFSPGQAVLDAWGKAYGVLANVFINREAEIYHENASKNGGWEGTRPFRIVAK
+ TPCSALITSFEFEPVDGGTVAEYRPGQYLGVWLKPEGFTHQEIRQYSLTRKPDGKGYR
+ IAVKREDGGQVSNWLHNHASVGDVVHLAAPAGDFFMNVAADTPVSLISAGVGQTPMLA
+ MLDTLAKAQHTAQVNWFHAAENGEVHAFADEVRELGRTLPRFTAHTWYREPTETDHAQ
+ SVFDSEGLMDLRQLEAAIRAPAMQFYLCGPVGFMQFAAKQLISLGVNNENIHYECFGP
+ HKVL"
+ misc_feature complement(316890..318077)
+ /locus_tag="SARI_00320"
+ /note="bifunctional nitric oxide
+ dioxygenase/dihydropteridine reductase 2; Provisional;
+ Region: PRK13289"
+ /db_xref="CDD:237337"
+ misc_feature complement(317685..318068)
+ /locus_tag="SARI_00320"
+ /note="Globins are heme proteins, which bind and transport
+ oxygen. This family summarizes a diverse set of homologous
+ protein domains, including: (1) tetrameric vertebrate
+ hemoglobins, which are the major protein component of
+ erythrocytes and transport oxygen...; Region: globin;
+ cd01040"
+ /db_xref="CDD:238510"
+ misc_feature complement(order(317697..317699,317784..317786,
+ 317793..317795,317823..317828,317910..317912,
+ 317919..317921,317949..317954,317961..317963,
+ 317991..317993))
+ /locus_tag="SARI_00320"
+ /note="heme-binding site [chemical binding]; other site"
+ /db_xref="CDD:238510"
+ misc_feature complement(316899..317639)
+ /locus_tag="SARI_00320"
+ /note="FAD_NAD(P)H binding domain of flavohemoglobin.
+ Flavohemoglobins have a globin domain containing a B-type
+ heme fused with a ferredoxin reductase-like
+ FAD/NAD-binding domain. Flavohemoglobins detoxify nitric
+ oxide (NO) via an NO dioxygenase reaction. The...; Region:
+ flavohem_like_fad_nad_binding; cd06184"
+ /db_xref="CDD:99781"
+ misc_feature complement(order(316908..316910,317262..317264,
+ 317388..317399,317412..317414,317418..317420,
+ 317457..317468,317514..317516))
+ /locus_tag="SARI_00320"
+ /note="FAD binding pocket [chemical binding]; other site"
+ /db_xref="CDD:99781"
+ misc_feature complement(order(317457..317462,317466..317468))
+ /locus_tag="SARI_00320"
+ /note="FAD binding motif [chemical binding]; other site"
+ /db_xref="CDD:99781"
+ misc_feature complement(order(317328..317330,317334..317336,
+ 317358..317360,317379..317381,317388..317390,
+ 317397..317399))
+ /locus_tag="SARI_00320"
+ /note="phosphate binding motif [ion binding]; other site"
+ /db_xref="CDD:99781"
+ misc_feature complement(order(317259..317261,317265..317276,
+ 317286..317288))
+ /locus_tag="SARI_00320"
+ /note="beta-alpha-beta structure motif; other site"
+ /db_xref="CDD:99781"
+ misc_feature complement(order(316986..316991,317187..317195,
+ 317268..317273))
+ /locus_tag="SARI_00320"
+ /note="NAD binding pocket [chemical binding]; other site"
+ /db_xref="CDD:99781"
+ misc_feature complement(316899..316901)
+ /locus_tag="SARI_00320"
+ /note="Heme binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:99781"
+ gene 318133..318264
+ /locus_tag="SARI_00321"
+ CDS 318133..318264
+ /locus_tag="SARI_00321"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569402.1"
+ /db_xref="GI:161502290"
+ /translation="MPLNCKWFFAALSCERNNVKNLHHKAEKKSVEIRNAPVQENLI"
+ unsure 318252..318400
+ /note="Sequence derived from one plasmid subclone"
+ gene 318396..319655
+ /gene="glyA"
+ /locus_tag="SARI_00322"
+ CDS 318396..319655
+ /gene="glyA"
+ /locus_tag="SARI_00322"
+ /inference="protein motif:HMMPanther:IPR001085"
+ /inference="protein motif:HMMPfam:IPR001085"
+ /inference="protein motif:HMMPIR:IPR001085"
+ /inference="protein motif:ScanRegExp:IPR001085"
+ /inference="similar to AA sequence:INSD:AAX66455.1"
+ /note="'catalyzes the reaction of glycine with
+ 5,10-methylenetetrahydrofolate to form L-serine and
+ tetrahydrofolate'"
+ /codon_start=1
+ /transl_table=11
+ /product="serine hydroxymethyltransferase"
+ /protein_id="YP_001569403.1"
+ /db_xref="GI:161502291"
+ /db_xref="InterPro:IPR001085"
+ /translation="MRMLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPR
+ VMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQ
+ ANFAVYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIIPYGIDASGKIDYDDM
+ AKQAQEHKPKMIIGGFSAYSGVVDWARMREIADSIGAYLFVDMAHVAGLIAAGVYPNP
+ VPHAHVVTTTTHKTLAGPRGGLILAKGGDEDLYKKLNSAVFPSAQGGPLMHVIAAKAV
+ ALKEAMEPEFKVYQQQVAKNAKAMVEVFLNRGYKVVSGGTENHLFLLDLVDKNLTGKE
+ ADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVL
+ DNINDEATIERVKTKVLDICARFPVYA"
+ misc_feature 318417..319652
+ /gene="glyA"
+ /locus_tag="SARI_00322"
+ /note="serine hydroxymethyltransferase; Reviewed; Region:
+ glyA; PRK00011"
+ /db_xref="CDD:234571"
+ misc_feature 318426..319628
+ /gene="glyA"
+ /locus_tag="SARI_00322"
+ /note="Serine-glycine hydroxymethyltransferase (SHMT).
+ This family belongs to pyridoxal phosphate (PLP)-dependent
+ aspartate aminotransferase superfamily (fold I). SHMT
+ carries out interconversion of serine and glycine; it
+ catalyzes the transfer of hydroxymethyl...; Region: SHMT;
+ cd00378"
+ /db_xref="CDD:99733"
+ misc_feature order(318435..318437,318441..318443,318462..318467,
+ 318492..318494,318507..318509,318561..318563,
+ 318615..318620,318642..318644,318687..318689,
+ 318708..318710,318813..318818,319194..319196,
+ 319248..319250)
+ /gene="glyA"
+ /locus_tag="SARI_00322"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:99733"
+ misc_feature order(318504..318506,318777..318779,319086..319088,
+ 319488..319490)
+ /gene="glyA"
+ /locus_tag="SARI_00322"
+ /note="active site"
+ /db_xref="CDD:99733"
+ misc_feature order(318504..318506,318564..318566,318594..318596,
+ 318693..318698,318777..318779,318924..318926,
+ 318999..319001,319008..319010,319083..319088,
+ 319104..319106,319488..319490)
+ /gene="glyA"
+ /locus_tag="SARI_00322"
+ /note="glycine-pyridoxal phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:99733"
+ misc_feature order(318570..318572,318591..318593,318762..318764,
+ 318774..318776,318780..318782,319170..319172,
+ 319440..319442)
+ /gene="glyA"
+ /locus_tag="SARI_00322"
+ /note="folate binding site [chemical binding]; other site"
+ /db_xref="CDD:99733"
+ gene 319850..320989
+ /locus_tag="SARI_00323"
+ CDS 319850..320989
+ /locus_tag="SARI_00323"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="protein motif:ScanRegExp:IPR001623"
+ /inference="similar to AA sequence:INSD:AAX66454.1"
+ /note="putative transporter of 3-phenylpropionate across
+ the inner membrane; member of the major facilitator
+ superfamily of transporters"
+ /codon_start=1
+ /transl_table=11
+ /product="putative 3-phenylpropionic acid transporter"
+ /protein_id="YP_001569404.1"
+ /db_xref="GI:161502292"
+ /db_xref="InterPro:IPR001623"
+ /db_xref="InterPro:IPR011701"
+ /translation="MALHSTRWLALSYFTYFFSYGIFLPFWSVWLKGLGLTPETIGLL
+ LGVGLVARFLGSLLIAPRVSNPSRLISALRVLALLTLVFALAFWAGTHVAWLMVVMVG
+ FNLFFSPLVPLTDALANTWQKQIILDYGRVRLWGSIAFVIGSALTGKLVSLYDYQAIL
+ ALLTLGVASMLLGMLLRPSVPPQGESRQQEGAGWSAWCILVTQSWRFLACVCLLQGAH
+ AAYYGFSAIYWQGAGYSASAVGYLWSLGVVAEVIIFALSKKLFRRFSARDLLLLSAVC
+ GVVRWGLMGWSTTLPWLIVIQILHCGTFTVCHLAAMRYIAARQGSEVIRLQAVYSAVA
+ MGGSIAIMTVFAGFLYQHLGCGVFWIMALVALPAIFLRPKVVAAS"
+ misc_feature 319850..320986
+ /locus_tag="SARI_00323"
+ /note="putative 3-phenylpropionic acid transporter;
+ Provisional; Region: PRK11128"
+ /db_xref="CDD:236856"
+ misc_feature 319868..>320029
+ /locus_tag="SARI_00323"
+ /note="MFS_1 like family; Region: MFS_1_like; pfam12832"
+ /db_xref="CDD:193307"
+ gene complement(320984..322261)
+ /locus_tag="SARI_00324"
+ CDS complement(320984..322261)
+ /locus_tag="SARI_00324"
+ /inference="protein motif:HMMPfam:IPR011608"
+ /inference="similar to AA sequence:REFSEQ:NP_461488.1"
+ /note="'KEGG: spz:M5005_Spy_1664 0.0080 PTS system,
+ mannitol (cryptic)-specific IIA component K00890;
+ COG: COG3711 Transcriptional antiterminator;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="stationary phase inducible protein CsiE"
+ /protein_id="YP_001569405.1"
+ /db_xref="GI:161502293"
+ /db_xref="InterPro:IPR011608"
+ /translation="MMPTIAPPSVLSAPQRRCQILLTLFQPGQIATMEIFSALNGVDD
+ DIAREDLTETGLEIQRYHRLAITTCQNGCYRIEGTALDQRLCLLHWLRRGLRLCPTFV
+ TQQFTPALKNALKQRGIARPLYDDINLHALINLCARRLQKPFENRDVQFLRLFLQYCL
+ LQHHAGITPAFNPVQQIWALSCAEYSLAQEIGRHWQRHVMQAAPLNEALFMALLFSMI
+ RLPDPIRDTHPRAQKLRLEVARLVLRFREKGNARFSDEQGLNDQLYVHLAQALNRSLF
+ TIGIDNTLPEEFNRLYPRLVRTTREALAGFEAEYGIRFSDEEKGLVAVIFGAWLMQDN
+ DLHEKQIVLLTDKNDALETHIEQQLRELTLLPLNIKRVSTLAFQKEGCPRGVALIVTP
+ YATPLPLFSPPLIHADRALTAHQQQQIRKILES"
+ misc_feature complement(320987..322261)
+ /locus_tag="SARI_00324"
+ /note="stationary phase inducible protein CsiE;
+ Provisional; Region: PRK11564"
+ /db_xref="CDD:236932"
+ misc_feature complement(321611..321874)
+ /locus_tag="SARI_00324"
+ /note="PRD domain; Region: PRD; pfam00874"
+ /db_xref="CDD:201484"
+ misc_feature complement(321275..321544)
+ /locus_tag="SARI_00324"
+ /note="PRD domain; Region: PRD; pfam00874"
+ /db_xref="CDD:201484"
+ gene 322387..323025
+ /locus_tag="SARI_00325"
+ CDS 322387..323025
+ /locus_tag="SARI_00325"
+ /inference="protein motif:HMMPfam:IPR010412"
+ /inference="similar to AA sequence:REFSEQ:YP_149645.1"
+ /note="'COG: COG3683 ABC-type uncharacterized transport
+ system, periplasmic component;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569406.1"
+ /db_xref="GI:161502294"
+ /db_xref="InterPro:IPR010412"
+ /translation="MKPVKRSALTLFLAVLSFVAAAHPHSFIRLQTQVVSENQQFVAL
+ KMRWTMDELTSADLLYDAGSAAPGSEIWKKLAAEVMANVLGQHYFTEAWRNGAKVKFK
+ NRPTEYGMTRDAHQAVLTFTLPLAEPQPLSGQTYTFSTFDPSYYVDMHYDQDSDVTMP
+ EPLREKCRIQVHTPAPGEEILRFAQSLDKEDAPPEDMDLGKQFAQTVTLQCQ"
+ misc_feature 322387..323019
+ /locus_tag="SARI_00325"
+ /note="ABC-type uncharacterized transport system,
+ periplasmic component [General function prediction only];
+ Region: COG3683"
+ /db_xref="CDD:226208"
+ gene 323016..324002
+ /locus_tag="SARI_00326"
+ CDS 323016..324002
+ /locus_tag="SARI_00326"
+ /inference="protein motif:HMMPfam:IPR011541"
+ /inference="similar to AA sequence:REFSEQ:YP_217532.1"
+ /note="'COG: COG2215 ABC-type uncharacterized transport
+ system, permease component;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="high-affinity nickel transporter"
+ /protein_id="YP_001569407.2"
+ /db_xref="GI:448236190"
+ /db_xref="InterPro:IPR011541"
+ /translation="MSVIFSPHTPVRRWLSLWPLALLLLLMLAGGLWIWQAWPQVMLK
+ SALWQREVNQQLSALLKAVATHPERAGGSLLVLSFMYGVLHALGPGHGKVVIATWLAT
+ HPSRLKSSIALTLAAALLQGLLAIGLVVGVLTVLQLPARKLHLSGFWLEKVSYALVGG
+ LGILLCWRAMKRLRALLRKPGFIAFTPRHVHHEKCGCGHQHLPTREHLHSGDDWRARL
+ MIVLSMGMRPCSGAIMVLLFSKVIGVFSWGMASVLAMAAGTSLTITSLALLVHTFRAL
+ AVKLSGNKTPALWRLVGWSTLALAGGIILLIAALVMWFSVPQPVGGLRPWRG"
+ misc_feature 323121..323876
+ /locus_tag="SARI_00326"
+ /note="ABC-type uncharacterized transport system, permease
+ component [General function prediction only]; Region:
+ COG2215"
+ /db_xref="CDD:225125"
+ gene complement(324003..325037)
+ /locus_tag="SARI_00327"
+ CDS complement(324003..325037)
+ /locus_tag="SARI_00327"
+ /inference="protein motif:FPrintScan:IPR006066"
+ /inference="protein motif:HMMPfam:IPR001450"
+ /inference="protein motif:HMMPfam:IPR005117"
+ /inference="protein motif:HMMPfam:IPR006067"
+ /inference="protein motif:ScanRegExp:IPR001450"
+ /inference="protein motif:ScanRegExp:IPR006066"
+ /inference="protein motif:superfamily:IPR011255"
+ /inference="similar to AA sequence:INSD:AAX66450.1"
+ /note="'KEGG: stt:t0306 4.8e-180 asrC; anaerobic sulfite
+ reductase subunit C K00385;
+ COG: COG2221 Dissimilatory sulfite reductase
+ (desulfoviridin), alpha and beta subunits;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569408.1"
+ /db_xref="GI:161502296"
+ /db_xref="InterPro:IPR001450"
+ /db_xref="InterPro:IPR005117"
+ /db_xref="InterPro:IPR006066"
+ /db_xref="InterPro:IPR006067"
+ /db_xref="InterPro:IPR011255"
+ /translation="MPIKENIMSIDIDIIKARAKNEYRLSKVRGEAMISVRIPGGILP
+ AHLLTVARDIAETWGNGQIHLTTRQKLAMPGIRYEDIDKVNAALEPFLREIEMELCDV
+ QVEDTKAGYLAIGGRNIVACQGNRICQKANTDTTGLSRRLEKLVYPSPYHLKTVIVGC
+ PNDCAKASMADLGIIGVAKMRFTAERCIGCGACMKACSHHAVGCLALKNGKAVKEESA
+ CIGCGECVLACPTLAWQRKPEQLWQVRLGGRTSKKTPRVGKLFLNWVTEEVIKQVIVN
+ LYEFEKEMLGGKPIYLHMGHLIDKGGYMRFKERVLRGVQLNPEAMVAERIYWAEDESV
+ ARMHLKSAGH"
+ misc_feature complement(324054..325007)
+ /locus_tag="SARI_00327"
+ /note="sulfite reductase, subunit C; Region:
+ sulfite_red_C; TIGR02912"
+ /db_xref="CDD:131958"
+ misc_feature complement(324771..324950)
+ /locus_tag="SARI_00327"
+ /note="Nitrite/Sulfite reductase ferredoxin-like half
+ domain; Region: NIR_SIR_ferr; pfam03460"
+ /db_xref="CDD:217572"
+ misc_feature complement(<324345..>324491)
+ /locus_tag="SARI_00327"
+ /note="The HCP family of iron-sulfur proteins includes
+ hybrid cluster protein (HCP), acetyl-CoA synthase (ACS),
+ and carbon monoxide dehydrogenase (CODH), all of which
+ contain [Fe4-S4] metal clusters at their active sites.
+ These proteins have a conserved...; Region: HCP_like;
+ cl14655"
+ /db_xref="CDD:246686"
+ gene complement(325027..325845)
+ /locus_tag="SARI_00328"
+ CDS complement(325027..325845)
+ /locus_tag="SARI_00328"
+ /inference="protein motif:FPrintScan:IPR001221"
+ /inference="protein motif:HMMPfam:IPR001433"
+ /inference="protein motif:HMMPfam:IPR008333"
+ /inference="protein motif:HMMPIR:IPR012165"
+ /inference="similar to AA sequence:INSD:AAL21443.1"
+ /note="with AsrAC catalyzes the reduction of sulfite to
+ hydrogen sulfide"
+ /codon_start=1
+ /transl_table=11
+ /product="anaerobic sulfite reductase subunit B"
+ /protein_id="YP_001569409.2"
+ /db_xref="GI:448236191"
+ /db_xref="InterPro:IPR001221"
+ /db_xref="InterPro:IPR001433"
+ /db_xref="InterPro:IPR008333"
+ /db_xref="InterPro:IPR012165"
+ /translation="MSHCSCHDKPQHSLLPAAYRILSITRHTPLEWNFRVEVDFPAHW
+ GQFVEVSLPRVGEAPISVSDCGNGWIDLLIRNVGKVTSALFTLKEGDNVWLRGCYGNG
+ YPVNTLRHKPLLVVAGGTGVAPVKGLMRYFVENPQEIGQLDMILGYKNRDCVLYREEM
+ ATWRGKHNLVLTLDEGEADDRYQIGRVTDRLAELALSDIDTMQAIVVGPPIMITFTVK
+ MLLQKGLKPEQIWVDYERRMACSVGKCGHCRMGEVYVCTDGPIFNYAVAQRFAD"
+ misc_feature complement(325030..325818)
+ /locus_tag="SARI_00328"
+ /note="anaerobic sulfite reductase subunit B; Provisional;
+ Region: PRK08221"
+ /db_xref="CDD:181300"
+ misc_feature complement(325054..325785)
+ /locus_tag="SARI_00328"
+ /note="Anaerobic sulfite reductase contains an FAD and
+ NADPH binding module with structural similarity to
+ ferredoxin reductase and sequence similarity to
+ dihydroorotate dehydrogenases. Clostridium pasteurianum
+ inducible dissimilatory type sulfite reductase is...;
+ Region: sulfite_reductase_like; cd06221"
+ /db_xref="CDD:99817"
+ misc_feature complement(order(325135..325140,325486..325488,
+ 325603..325611,325621..325629,325663..325674,
+ 325678..325680))
+ /locus_tag="SARI_00328"
+ /note="FAD binding pocket [chemical binding]; other site"
+ /db_xref="CDD:99817"
+ misc_feature complement(order(325663..325668,325672..325674))
+ /locus_tag="SARI_00328"
+ /note="FAD binding motif [chemical binding]; other site"
+ /db_xref="CDD:99817"
+ misc_feature complement(order(325546..325548,325552..325554,
+ 325576..325578,325594..325596,325603..325605,
+ 325612..325614))
+ /locus_tag="SARI_00328"
+ /note="phosphate binding motif [ion binding]; other site"
+ /db_xref="CDD:99817"
+ misc_feature complement(order(325474..325476,325480..325491,
+ 325501..325503))
+ /locus_tag="SARI_00328"
+ /note="beta-alpha-beta structure motif; other site"
+ /db_xref="CDD:99817"
+ misc_feature complement(order(325219..325224,325399..325407,
+ 325483..325488))
+ /locus_tag="SARI_00328"
+ /note="NAD binding pocket [chemical binding]; other site"
+ /db_xref="CDD:99817"
+ misc_feature complement(order(325078..325080,325102..325104,
+ 325111..325113,325126..325128))
+ /locus_tag="SARI_00328"
+ /note="Iron coordination center [ion binding]; other site"
+ /db_xref="CDD:99817"
+ gene complement(325849..326895)
+ /locus_tag="SARI_00329"
+ CDS complement(325849..326895)
+ /locus_tag="SARI_00329"
+ /inference="protein motif:HMMPfam:IPR001450"
+ /inference="protein motif:ScanRegExp:IPR001450"
+ /inference="protein motif:superfamily:IPR009051"
+ /inference="similar to AA sequence:SwissProt:P26474"
+ /note="'KEGG: cno:NT01CX_0257 5.9e-79 anaerobic sulfite
+ reductase subunit A K00437;
+ COG: COG1145 Ferredoxin;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569410.1"
+ /db_xref="GI:161502298"
+ /db_xref="InterPro:IPR001450"
+ /db_xref="InterPro:IPR009051"
+ /translation="MMAIKITPDEFSLLIQRLSKQWRVFAPSAEFRGGRFSDTDNIIY
+ QQISGWRDLIWHEKSHMSPNTIITPITETLFYFDKDTIQIAGTDTSPIVIFARACDIN
+ AMSRLDYMFLSNGNNSDYSYQLLREHIHFVLIECEESFENCFCVSMGTNKTDRYSAAM
+ RFSDEGALVSIRDPFIEAAIQGLGQEVDYTPSFVSENRETVVKPDSVCHDPQKIRDIL
+ TRHPLWDAYDSRCISCGRCTTGCPTCTCYSVFDVAYDENPQRGERRRQWASCMVPGFS
+ DMAGGHGFREKPGERLRYRALHKVNDYKARNGIEHMCVGCGRCDDRCPQYIKFSLIIN
+ KMTAAVQQALAEEA"
+ misc_feature complement(325852..326892)
+ /locus_tag="SARI_00329"
+ /note="anaerobic sulfite reductase subunit A; Provisional;
+ Region: PRK15055"
+ /db_xref="CDD:237890"
+ misc_feature complement(326692..326880)
+ /locus_tag="SARI_00329"
+ /note="The Death Domain Superfamily of protein-protein
+ interaction domains; Region: DD_superfamily; cl14633"
+ /db_xref="CDD:246680"
+ misc_feature complement(<325855..>325959)
+ /locus_tag="SARI_00329"
+ /note="The HCP family of iron-sulfur proteins includes
+ hybrid cluster protein (HCP), acetyl-CoA synthase (ACS),
+ and carbon monoxide dehydrogenase (CODH), all of which
+ contain [Fe4-S4] metal clusters at their active sites.
+ These proteins have a conserved...; Region: HCP_like;
+ cl14655"
+ /db_xref="CDD:246686"
+ gene complement(327116..327910)
+ /locus_tag="SARI_00330"
+ CDS complement(327116..327910)
+ /locus_tag="SARI_00330"
+ /inference="protein motif:BlastProDom:IPR000760"
+ /inference="protein motif:FPrintScan:IPR000760"
+ /inference="protein motif:HMMPfam:IPR000760"
+ /inference="protein motif:ScanRegExp:IPR000760"
+ /inference="similar to AA sequence:SwissProt:P58537"
+ /note="'KEGG: spt:SPA0320 1.5e-137 suhB; extragenic
+ suppressor protein SuhB K01092;
+ COG: COG0483 Archaeal fructose-1,6-bisphosphatase and
+ related enzymes of inositol monophosphatase family;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="inositol monophosphatase"
+ /protein_id="YP_001569411.1"
+ /db_xref="GI:161502299"
+ /db_xref="InterPro:IPR000760"
+ /translation="MLTIAVRAARKAGNVIAKNYETPDAVEASQKGSNDFVTNVDKAA
+ EAVIIDTIRKSYPQHTIITEESGEHVGTDQDVQWVIDPLDGTTNFIKRLPHFAVSIAV
+ RIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFKAKQ
+ YATTYINIIGKLFTECADFRRTGSAALDLAYVAAGRVDGFFEIGLRPWDFAAGELLVR
+ EAGGIVSDFTGGHNYLMTGNIVAGNPRVVKAMLANMRDELSDALKR"
+ misc_feature complement(327146..327910)
+ /locus_tag="SARI_00330"
+ /note="Archaeal fructose-1,6-bisphosphatase and related
+ enzymes of inositol monophosphatase family [Carbohydrate
+ transport and metabolism]; Region: SuhB; COG0483"
+ /db_xref="CDD:223559"
+ misc_feature complement(327182..327910)
+ /locus_tag="SARI_00330"
+ /note="IMPase, inositol monophosphatase and related
+ domains. A family of Mg++ dependent phosphatases,
+ inhibited by lithium, many of which may act on inositol
+ monophosphate substrate. They dephosphorylate inositol
+ phosphate to generate inositol, which may be...; Region:
+ IMPase; cd01639"
+ /db_xref="CDD:238817"
+ misc_feature complement(order(327284..327289,327653..327670,
+ 327716..327721,327788..327790,327806..327808,
+ 327821..327823))
+ /locus_tag="SARI_00330"
+ /note="active site"
+ /db_xref="CDD:238817"
+ misc_feature complement(order(327317..327328,327338..327340,
+ 327362..327382,327392..327394,327401..327406,
+ 327413..327415,327422..327427,327449..327454,
+ 327458..327460,327464..327472,327626..327643,
+ 327647..327652,327803..327805,327809..327811))
+ /locus_tag="SARI_00330"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238817"
+ gene 328038..328766
+ /locus_tag="SARI_00331"
+ CDS 328038..328766
+ /locus_tag="SARI_00331"
+ /inference="protein motif:BlastProDom:IPR001537"
+ /inference="protein motif:HMMPfam:IPR001537"
+ /inference="protein motif:HMMTigr:IPR004384"
+ /inference="similar to AA sequence:REFSEQ:NP_457076.1"
+ /note="'KEGG: stm:STM2545 5.6e-122 putative rRNA methylase
+ K02533;
+ COG: COG0565 rRNA methylase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569412.1"
+ /db_xref="GI:161502300"
+ /db_xref="InterPro:IPR001537"
+ /db_xref="InterPro:IPR004384"
+ /translation="MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS
+ QAIALAAGASDVIGNAQIVDTLDEALTGCSLVVGTSARSRTLPWPMLDPRECGLKSVA
+ EATNTPVALVFGRERVGLTNDELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW
+ LATQENGDAEHEETPYPLVDDLERFYSHLEQTLLSTGFIRENHPGQVMNKLRRLFTRA
+ RPESLELNILRGMLASIEQQNKGK"
+ misc_feature 328038..328763
+ /locus_tag="SARI_00331"
+ /note="tRNA
+ (cytidine/uridine-2'-O-)-methyltransferase TrmJ;
+ Provisional; Region: PRK15114"
+ /db_xref="CDD:185069"
+ misc_feature 328050..>328508
+ /locus_tag="SARI_00331"
+ /note="SpoU rRNA Methylase family; Region: SpoU_methylase;
+ cl17307"
+ /db_xref="CDD:247861"
+ gene 328982..329476
+ /locus_tag="SARI_00332"
+ CDS 328982..329476
+ /locus_tag="SARI_00332"
+ /inference="protein motif:BlastProDom:IPR000944"
+ /inference="protein motif:HMMPfam:IPR000944"
+ /inference="protein motif:HMMTigr:IPR000944"
+ /inference="protein motif:HMMTigr:IPR010242"
+ /inference="protein motif:ScanRegExp:IPR000944"
+ /inference="similar to AA sequence:INSD:AAV76341.1"
+ /note="regulates the expression of the iscRSUA operon"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional regulator IscR"
+ /protein_id="YP_001569413.1"
+ /db_xref="GI:161502301"
+ /db_xref="InterPro:IPR000944"
+ /db_xref="InterPro:IPR010242"
+ /translation="MRLTSKGRYAVTAMLDVALNSEAGPVPLADISERQGISLSYLEQ
+ LFSRLRKNGLVSSVRGPGGGYLLGKDAGSIAVGEVISAVDESVDATRCQGKGGCQGGD
+ KCLTHALWRDLSDRLTGFLNNITLGELVNNQEVLDVSGRQHTHDAPRANGRVQDAIDV
+ KLRA"
+ misc_feature 328982..329473
+ /locus_tag="SARI_00332"
+ /note="DNA-binding transcriptional regulator IscR;
+ Provisional; Region: PRK10857"
+ /db_xref="CDD:236777"
+ misc_feature 328982..329374
+ /locus_tag="SARI_00332"
+ /note="Rrf2 family protein; Region: rrf2_super; TIGR00738"
+ /db_xref="CDD:129821"
+ gene 329657..330871
+ /locus_tag="SARI_00333"
+ CDS 329657..330871
+ /locus_tag="SARI_00333"
+ /inference="protein motif:HMMPfam:IPR000192"
+ /inference="protein motif:HMMTigr:IPR010240"
+ /inference="protein motif:ScanRegExp:IPR000192"
+ /inference="similar to AA sequence:REFSEQ:YP_149654.1"
+ /note="catalyzes the removal of elemental sulfur from
+ cysteine to produce alanine; involved in NAD biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="cysteine desulfurase"
+ /protein_id="YP_001569414.1"
+ /db_xref="GI:161502302"
+ /db_xref="InterPro:IPR000192"
+ /db_xref="InterPro:IPR010240"
+ /translation="MKLPIYLDYSATTPVDPRVAEKMMQFLTLDGTFGNPASRSHRFG
+ WQAEEAVDIARNQIAELVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKT
+ EHKAVLDTCRQLEREGFEVTYLAPQSNGIIDLKALEAAMRDDTILVSIMHVNNEIGVV
+ QDIATIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYV
+ RRKPRIRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMETEMARLRGLRNR
+ LWNGIKDIEEVYLNGDLEQGAPNILNVSFNYVEGESLIMALKDLAVSSGSACTSASLE
+ PSYVLRALGMNDELAHSSIRFSLGRFTTEEEIDYTIDLVRKSIGRLRDLSPLWEMYKQ
+ GVDLNSIEWAHH"
+ misc_feature 329657..330868
+ /locus_tag="SARI_00333"
+ /note="cysteine desulfurase; Provisional; Region:
+ PRK14012"
+ /db_xref="CDD:184450"
+ misc_feature 329669..330814
+ /locus_tag="SARI_00333"
+ /note="cysteine desulfurase NifS; Region: FeS_nifS;
+ TIGR03402"
+ /db_xref="CDD:132443"
+ misc_feature order(329879..329884,329891..329893,330110..330112,
+ 330194..330196,330203..330205,330263..330265,
+ 330272..330274)
+ /locus_tag="SARI_00333"
+ /note="pyridoxal 5'-phosphate binding pocket [chemical
+ binding]; other site"
+ /db_xref="CDD:99742"
+ misc_feature 330272..330274
+ /locus_tag="SARI_00333"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:99742"
+ gene 330899..331285
+ /locus_tag="SARI_00334"
+ CDS 330899..331285
+ /locus_tag="SARI_00334"
+ /inference="protein motif:HMMPfam:IPR002871"
+ /inference="protein motif:HMMTigr:IPR011339"
+ /inference="similar to AA sequence:REFSEQ:YP_149655.1"
+ /note="'KEGG: rxy:Rxyl_1354 9.8e-16 tRNA
+ (5-methylaminomethyl-2-THIouridylate)-methyltransferase
+ K00566;
+ COG: COG0822 NifU homolog involved in Fe-S cluster
+ formation;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="scaffold protein"
+ /protein_id="YP_001569415.1"
+ /db_xref="GI:161502303"
+ /db_xref="InterPro:IPR002871"
+ /db_xref="InterPro:IPR011339"
+ /translation="MAYSEKVIDHYENPRNVGSFDNNDDNVGSGMVGAPACGDVMKLQ
+ IKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIADELELPPV
+ KIHCSILAEDAIKAAIADYKSKREAK"
+ misc_feature 330899..331276
+ /locus_tag="SARI_00334"
+ /note="NifU homolog involved in Fe-S cluster formation
+ [Energy production and conversion]; Region: IscU; COG0822"
+ /db_xref="CDD:223892"
+ misc_feature 330905..331249
+ /locus_tag="SARI_00334"
+ /note="Iron-sulfur cluster scaffold-like proteins; Region:
+ IscU_like; cd06664"
+ /db_xref="CDD:143480"
+ misc_feature order(330905..330913,330920..330925,331007..331012,
+ 331085..331087,331091..331093,331202..331207,
+ 331211..331216)
+ /locus_tag="SARI_00334"
+ /note="trimerization site [polypeptide binding]; other
+ site"
+ /db_xref="CDD:143480"
+ misc_feature order(331007..331009,331085..331087,331214..331216)
+ /locus_tag="SARI_00334"
+ /note="active site"
+ /db_xref="CDD:143480"
+ gene 331314..331637
+ /gene="iscA"
+ /locus_tag="SARI_00335"
+ CDS 331314..331637
+ /gene="iscA"
+ /locus_tag="SARI_00335"
+ /inference="protein motif:BlastProDom:IPR000361"
+ /inference="protein motif:HMMPanther:IPR000361"
+ /inference="protein motif:HMMPfam:IPR000361"
+ /inference="protein motif:HMMTigr:IPR000361"
+ /inference="protein motif:HMMTigr:IPR011302"
+ /inference="protein motif:ScanRegExp:IPR000361"
+ /inference="similar to AA sequence:SwissProt:Q8XFZ8"
+ /note="forms iron-sulfur clusters of ferredoxin [2FE-2S];
+ binds iron in the presence of the thioredoxin reductase
+ system; forms homodimers and tetramers; similar to SufA
+ protein"
+ /codon_start=1
+ /transl_table=11
+ /product="iron-sulfur cluster assembly protein"
+ /protein_id="YP_001569416.1"
+ /db_xref="GI:161502304"
+ /db_xref="InterPro:IPR000361"
+ /db_xref="InterPro:IPR011302"
+ /translation="MSITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEF
+ VDEPTAEDTVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFSNPNVKDECGCG
+ ESFHV"
+ misc_feature 331314..331634
+ /gene="iscA"
+ /locus_tag="SARI_00335"
+ /note="iron-sulfur cluster assembly protein; Provisional;
+ Region: iscA; PRK09502"
+ /db_xref="CDD:181914"
+ gene 331904..332419
+ /gene="hscB"
+ /locus_tag="SARI_00336"
+ CDS 331904..332419
+ /gene="hscB"
+ /locus_tag="SARI_00336"
+ /inference="protein motif:HMMPfam:IPR001623"
+ /inference="protein motif:HMMPfam:IPR012895"
+ /inference="protein motif:HMMSmart:IPR001623"
+ /inference="protein motif:HMMTigr:IPR004640"
+ /inference="protein motif:superfamily:IPR001623"
+ /inference="protein motif:superfamily:IPR009073"
+ /inference="similar to AA sequence:INSD:AAL21434.1"
+ /note="J-type co-chaperone that regulates the ATPase and
+ peptide-binding activity of Hsc66 chaperone; may function
+ in biogenesis of iron-sulfur proteins"
+ /codon_start=1
+ /transl_table=11
+ /product="co-chaperone HscB"
+ /protein_id="YP_001569417.1"
+ /db_xref="GI:161502305"
+ /db_xref="InterPro:IPR001623"
+ /db_xref="InterPro:IPR004640"
+ /db_xref="InterPro:IPR009073"
+ /db_xref="InterPro:IPR012895"
+ /translation="MDYFTLFGLPASYHIDTQALSLRFQDLQRQYHPDKFANGTQAQH
+ LAAVQQSATINQAWQTLRHPLTRAEYLLSLHGFDLASEQHTVRDTAFLMEQLTLREEL
+ DDIEQTKDDARLESFIKRVQKMFDTRLQQMVTQLDNAAWGEAADTVRKLRFLDKLRSS
+ ADQLEEKLLDF"
+ misc_feature 331904..332413
+ /gene="hscB"
+ /locus_tag="SARI_00336"
+ /note="co-chaperone HscB; Provisional; Region: hscB;
+ PRK05014"
+ /db_xref="CDD:179914"
+ misc_feature 331907..332086
+ /gene="hscB"
+ /locus_tag="SARI_00336"
+ /note="DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock
+ protein 40) proteins are highly conserved and play crucial
+ roles in protein translation, folding, unfolding,
+ translocation, and degradation. They act primarily by
+ stimulating the ATPase activity of Hsp70s; Region: DnaJ;
+ cd06257"
+ /db_xref="CDD:99751"
+ misc_feature order(331997..332005,332030..332032,332054..332059,
+ 332066..332071)
+ /gene="hscB"
+ /locus_tag="SARI_00336"
+ /note="HSP70 interaction site [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99751"
+ misc_feature 332159..332392
+ /gene="hscB"
+ /locus_tag="SARI_00336"
+ /note="HSCB C-terminal oligomerisation domain; Region:
+ HSCB_C; pfam07743"
+ /db_xref="CDD:219548"
+ gene 332432..334282
+ /gene="hscA"
+ /locus_tag="SARI_00337"
+ CDS 332432..334282
+ /gene="hscA"
+ /locus_tag="SARI_00337"
+ /inference="protein motif:BlastProDom:IPR013126"
+ /inference="protein motif:FPrintScan:IPR001023"
+ /inference="protein motif:HMMPanther:IPR001023"
+ /inference="protein motif:HMMPfam:IPR013126"
+ /inference="protein motif:HMMTigr:IPR010236"
+ /inference="protein motif:ScanRegExp:IPR013126"
+ /note="involved in the maturation of iron-sulfur
+ cluster-containing proteins"
+ /codon_start=1
+ /transl_table=11
+ /product="chaperone protein HscA"
+ /protein_id="YP_001569418.1"
+ /db_xref="GI:161502306"
+ /db_xref="InterPro:IPR001023"
+ /db_xref="InterPro:IPR010236"
+ /db_xref="InterPro:IPR013126"
+ /translation="MALLQISEPGLSAAPHQRRLAAGIDLGTTNSLVATVRSGQAETL
+ PDHEGRHLLPSVVHYQQQGHTVGYAARDNAAQDTANTISSVKRMMGRSLADIQSRYPH
+ LPYRFQASENGLPMIETAAGLLNPVRVSADILKALAARASESLSGELDGVVITVPAYF
+ DDAQRQGTKDAARLAGLHVLRLLNEPTAAAIAYGLDSGKEGVIAVYDLGGGTFDISIL
+ RLSCGVFEVLATGGDSALGGDDFDHLLADYIREQAGIADRSDNRVQRELLDAAIAAKI
+ ALSDADTVRVNVAGWQGEITREQFNDLIAALVKRTLLACRRALKDADVDPQEVLEVVM
+ VGGSTRVPLVRERVGEFFGRTPLTAIDPDKVVAIGAAIQADILVGNKPDSEMLLLDVI
+ PLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELAQDCRS
+ LARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGIEASIQVKPSYGLTDSE
+ IASMIKDSMSFAEQDVKARMLAEQKVEAARVLESLTGALTADAALLSAAERQCIDDAA
+ AHLNAVAQGDDVDAIEQAIKNVDKQTQEFAARRMDQSVRRALKGHSVDEV"
+ misc_feature 332432..334279
+ /gene="hscA"
+ /locus_tag="SARI_00337"
+ /note="chaperone protein HscA; Provisional; Region: hscA;
+ PRK05183"
+ /db_xref="CDD:235360"
+ misc_feature 332489..333556
+ /gene="hscA"
+ /locus_tag="SARI_00337"
+ /note="Nucleotide-binding domain of HscA and similar
+ proteins; Region: HscA_like_NBD; cd10236"
+ /db_xref="CDD:212678"
+ misc_feature order(332504..332506,332510..332521,332687..332689,
+ 332900..332902,332984..332986,333050..333067,
+ 333071..333073,333143..333148,333245..333247,
+ 333254..333259,333437..333445,333449..333454,
+ 333518..333520)
+ /gene="hscA"
+ /locus_tag="SARI_00337"
+ /note="nucleotide binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:212678"
+ misc_feature order(332573..332575,332621..332623,332633..332635,
+ 332642..332647,332858..332863,333215..333217,
+ 333224..333229,333236..333238,333248..333250,
+ 333284..333286,333290..333295)
+ /gene="hscA"
+ /locus_tag="SARI_00337"
+ /note="putative NEF/HSP70 interaction site [polypeptide
+ binding]; other site"
+ /db_xref="CDD:212678"
+ misc_feature order(332915..332920,332924..332929,332972..332977,
+ 332981..332983,333104..333115)
+ /gene="hscA"
+ /locus_tag="SARI_00337"
+ /note="SBD interface [polypeptide binding]; other site"
+ /db_xref="CDD:212678"
+ gene 334284..334619
+ /locus_tag="SARI_00338"
+ CDS 334284..334619
+ /locus_tag="SARI_00338"
+ /inference="protein motif:Gene3D:IPR012675"
+ /inference="protein motif:HMMPfam:IPR001041"
+ /inference="protein motif:HMMTigr:IPR011536"
+ /inference="protein motif:ScanRegExp:IPR001055"
+ /inference="protein motif:superfamily:IPR001041"
+ /inference="similar to AA sequence:INSD:AAO68042.1"
+ /note="'KEGG: eci:UTI89_C2847 2.2e-56 fdx; ferredoxin,
+ 2Fe-2S K04755;
+ COG: COG0633 Ferredoxin;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569419.1"
+ /db_xref="GI:161502307"
+ /db_xref="InterPro:IPR001041"
+ /db_xref="InterPro:IPR001055"
+ /db_xref="InterPro:IPR011536"
+ /db_xref="InterPro:IPR012675"
+ /translation="MPKIVILPHQDLCPDGAVLEAQTGETILDVALRNGIEIEHACEK
+ SCACTTCHCIVREGFDSLPESSEEEDDMLDKAWGLEPESRLSCQARVTDDDLVIEIPR
+ YTINHAREH"
+ misc_feature 334284..334595
+ /locus_tag="SARI_00338"
+ /note="Ferredoxin [Energy production and conversion];
+ Region: Fdx; COG0633"
+ /db_xref="CDD:223706"
+ misc_feature 334323..334580
+ /locus_tag="SARI_00338"
+ /note="2Fe-2S iron-sulfur cluster binding domain.
+ Iron-sulfur proteins play an important role in electron
+ transfer processes and in various enzymatic reactions. The
+ family includes plant and algal ferredoxins, which act as
+ electron carriers in photosynthesis...; Region: fer2;
+ cd00207"
+ /db_xref="CDD:238126"
+ misc_feature order(334395..334400,334407..334409,334416..334418,
+ 334425..334436,334539..334544)
+ /locus_tag="SARI_00338"
+ /note="catalytic loop [active]"
+ /db_xref="CDD:238126"
+ misc_feature order(334407..334409,334425..334427,334434..334436,
+ 334542..334544)
+ /locus_tag="SARI_00338"
+ /note="iron binding site [ion binding]; other site"
+ /db_xref="CDD:238126"
+ gene 334631..334831
+ /locus_tag="SARI_00339"
+ CDS 334631..334831
+ /locus_tag="SARI_00339"
+ /inference="protein motif:HMMPfam:IPR007479"
+ /inference="similar to AA sequence:REFSEQ:NP_457068.1"
+ /note="'COG: COG2975 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569420.1"
+ /db_xref="GI:161502308"
+ /db_xref="InterPro:IPR007479"
+ /translation="MGLKWTDSREIGEALYDAYPDVDPKTVRFTDLHQWICELDDFDD
+ DPNASNEKILEAILLVWLDEAE"
+ misc_feature 334631..334828
+ /locus_tag="SARI_00339"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10721"
+ /db_xref="CDD:170660"
+ gene 335080..336363
+ /locus_tag="SARI_00340"
+ CDS 335080..336363
+ /locus_tag="SARI_00340"
+ /inference="protein motif:HMMPfam:IPR000819"
+ /inference="protein motif:HMMPIR:IPR008330"
+ /inference="protein motif:ScanRegExp:IPR000819"
+ /inference="similar to AA sequence:INSD:AAL21430.1"
+ /note="catalyzes the removal of an N-terminal amino acid
+ from a peptide or arylamide"
+ /codon_start=1
+ /transl_table=11
+ /product="aminopeptidase B"
+ /protein_id="YP_001569421.1"
+ /db_xref="GI:161502309"
+ /db_xref="InterPro:IPR000819"
+ /db_xref="InterPro:IPR008330"
+ /translation="MTEAMNITLSTQPADARWGDKATYSINNDGITLHLNGNDDLGLI
+ QRAARKIDGLGIKQVALTGEGWDIERCWAFWAGYKGPKGVRTVMWPDLDDAQRQELDN
+ RLTIIDWVRDTINAPAEELGPEQLAQRAVDLLCSVACDHVTYRITKGEDLREQNYMGL
+ HTVGRGSERSPVLLALDYNPTGDKDAPVYACLVGKGITFDSGGYSIKQSAFMDSMKSD
+ MGGAATVTGALAFAITRGLNKRVKLFLCCADNLISGNAFKLGDIIRYRNGKNVEVMNT
+ DAEGRLVLADGLIDASAQHPQLIIDMATLTGAAKTALGNDYHALFSFDDTLAGRLLSS
+ AAQENEPFWRLPLAEFHRNQLPSNFAELNNTGSAAYPAGASTAAGFLSHFVENYREGW
+ LHIDCSATYRKAPVEQWAAGATGLGVRTIANLLTA"
+ misc_feature 335092..336360
+ /locus_tag="SARI_00340"
+ /note="aminopeptidase B; Provisional; Region: PRK05015"
+ /db_xref="CDD:235330"
+ misc_feature 335092..335322
+ /locus_tag="SARI_00340"
+ /note="Peptidase; Region: DUF3663; pfam12404"
+ /db_xref="CDD:152839"
+ misc_feature 335218..336354
+ /locus_tag="SARI_00340"
+ /note="Cytosol aminopeptidase family, N-terminal and
+ catalytic domains. Family M17 contains zinc- and
+ manganese-dependent exopeptidases ( EC 3.4.11.1),
+ including leucine aminopeptidase. They catalyze removal of
+ amino acids from the N-terminus of a protein and...;
+ Region: Peptidase_M17; cd00433"
+ /db_xref="CDD:238247"
+ misc_feature order(335422..335424,335428..335436,335575..335577,
+ 335581..335583,335674..335676,335692..335694,
+ 335707..335709,335716..335718,335725..335730,
+ 335824..335826,335830..335841,335845..335847,
+ 335851..335865,335881..335883,335887..335889,
+ 335899..335901,336007..336021,336028..336030,
+ 336106..336111,336115..336117,336130..336132,
+ 336136..336141,336154..336156,336160..336162,
+ 336193..336198,336202..336204,336310..336312)
+ /locus_tag="SARI_00340"
+ /note="interface (dimer of trimers) [polypeptide binding];
+ other site"
+ /db_xref="CDD:238247"
+ misc_feature order(335662..335664,335677..335679,335698..335700,
+ 335731..335733,335908..335910,335914..335916,
+ 335920..335922,335992..335994)
+ /locus_tag="SARI_00340"
+ /note="Substrate-binding/catalytic site; other site"
+ /db_xref="CDD:238247"
+ misc_feature order(335662..335664,335677..335679,335731..335733,
+ 335908..335910,335914..335916)
+ /locus_tag="SARI_00340"
+ /note="Zn-binding sites [ion binding]; other site"
+ /db_xref="CDD:238247"
+ gene 336470..337246
+ /locus_tag="SARI_00341"
+ CDS 336470..337246
+ /locus_tag="SARI_00341"
+ /inference="protein motif:HMMPfam:IPR009839"
+ /inference="similar to AA sequence:REFSEQ:YP_217517.1"
+ /note="enhances serine sensitivity caused by inhibition of
+ homoserine dehydrogenase I"
+ /codon_start=1
+ /transl_table=11
+ /product="enhanced serine sensitivity protein SseB"
+ /protein_id="YP_001569422.1"
+ /db_xref="GI:161502310"
+ /db_xref="InterPro:IPR009839"
+ /translation="MSEIKNELEILLEKAATEPAHRPAFFRTLLESTVWVPGSAAEGE
+ AIVEDSALDLQHWEKEDGTTVIPFFTSLEALQQAVEDEQAFVVMPVRTLFEMTLGETL
+ FLNAKLPTGKEFMPREISLLLGEEGSPLSTQEVLEGGESLILSEVAEPPSQMIDSLTT
+ LFKTIKPVKRAFLCAIKEHADAQPNLLIGIEADGDIEEIIHAAGNVATDTLPGDEPID
+ ICQVRKGEQGISHFITEHIAPFYERRWGGFLRDFKQNRII"
+ misc_feature 336512..337237
+ /locus_tag="SARI_00341"
+ /note="enhanced serine sensitivity protein SseB;
+ Provisional; Region: PRK11611"
+ /db_xref="CDD:183229"
+ gene complement(337250..337545)
+ /locus_tag="SARI_00342"
+ misc_RNA complement(337250..337545)
+ /locus_tag="SARI_00342"
+ /product="RyfA RNA"
+ /inference="nucleotide motif:Rfam:RF00126"
+ /note="Rfam score 323.14"
+ gene 337629..337835
+ /locus_tag="SARI_00343"
+ CDS 337629..337835
+ /locus_tag="SARI_00343"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569423.1"
+ /db_xref="GI:161502311"
+ /translation="MVCLRCYGNKACWKGREPDQHKKTAQLSGFFVACLNRIYVDSFQ
+ ISLNCRPDKRERHPAWQILSGFNR"
+ gene complement(337815..338669)
+ /gene="sseA"
+ /locus_tag="SARI_00344"
+ CDS complement(337815..338669)
+ /gene="sseA"
+ /locus_tag="SARI_00344"
+ /inference="protein motif:HMMPfam:IPR001763"
+ /inference="protein motif:HMMSmart:IPR001763"
+ /inference="protein motif:ScanRegExp:IPR001307"
+ /inference="similar to AA sequence:REFSEQ:NP_457064.1"
+ /note="catalyzes the transfer of a sulfur ion to cyanide
+ or to other thiol compounds"
+ /codon_start=1
+ /transl_table=11
+ /product="3-mercaptopyruvate sulfurtransferase"
+ /protein_id="YP_001569424.1"
+ /db_xref="GI:161502312"
+ /db_xref="InterPro:IPR001307"
+ /db_xref="InterPro:IPR001763"
+ /translation="MEMPMTTAYFVAADWLAEHIDDPEIQILDARMAPPGQEHRDMAG
+ EYRAGHIPGALFFDIEALSDHASPLPHMMPRPEAFAVAMRELGVRQDKHLVIYDEGNL
+ FSAPRAWWMLRTFGAEKVSILAGGLAGWQRDEWLLREGDEAHEEGEFEAKFTPQAVVR
+ LTDVLLASHEKTAQIVDARPAARFNAQADEPRPGLRRGHIPGALNVPWTELVFEGELK
+ TTDELNEVFFSHGVSFDRPIIASCGSGVTAAVVVLALATLDVPDVTLYDGAWSEWGAR
+ TDLPVEPA"
+ misc_feature complement(337818..338657)
+ /gene="sseA"
+ /locus_tag="SARI_00344"
+ /note="3-mercaptopyruvate sulfurtransferase; Provisional;
+ Region: sseA; PRK11493"
+ /db_xref="CDD:236917"
+ misc_feature complement(338274..338642)
+ /gene="sseA"
+ /locus_tag="SARI_00344"
+ /note="Thiosulfate sulfurtransferase (TST), N-terminal,
+ inactive domain. TST contains 2 copies of the Rhodanese
+ Homology Domain; this is the 1st repeat, which does not
+ contain the catalytically active Cys residue. The role of
+ the 1st repeat is uncertain, but it...; Region:
+ TST_Repeat_1; cd01448"
+ /db_xref="CDD:238725"
+ misc_feature complement(338376..338378)
+ /gene="sseA"
+ /locus_tag="SARI_00344"
+ /note="active site residue [active]"
+ /db_xref="CDD:238725"
+ misc_feature complement(337845..338183)
+ /gene="sseA"
+ /locus_tag="SARI_00344"
+ /note="Thiosulfate sulfurtransferase (TST), C-terminal,
+ catalytic domain. TST contains 2 copies of the Rhodanese
+ Homology Domain; this is the second repeat. Only the
+ second repeat contains the catalytically active Cys
+ residue; Region: TST_Repeat_2; cd01449"
+ /db_xref="CDD:238726"
+ misc_feature complement(337944..337946)
+ /gene="sseA"
+ /locus_tag="SARI_00344"
+ /note="active site residue [active]"
+ /db_xref="CDD:238726"
+ gene 338866..343800
+ /locus_tag="SARI_00345"
+ CDS 338866..343800
+ /locus_tag="SARI_00345"
+ /inference="protein motif:HMMPfam:IPR002890"
+ /inference="protein motif:HMMPfam:IPR011625"
+ /inference="protein motif:superfamily:IPR008930"
+ /note="'COG: COG2373 Large extracellular alpha-helical
+ protein;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569425.1"
+ /db_xref="GI:161502313"
+ /db_xref="InterPro:IPR002890"
+ /db_xref="InterPro:IPR008930"
+ /db_xref="InterPro:IPR011625"
+ /translation="MKHLRVVACIIMLALAGCDNNDKIAPTTKNETSAAAQSSPAKDP
+ AQLQKLAQQSQGKALTLLDASEAQLDGAATLVLTFSIPLDPEQDFSRVIHIVDKKSGS
+ VDGAWELAPNLKELRLRHLEPKRVLVVTVDPAVKALNNATFGTPYEKTITTRDVQPSV
+ GFASRGSLLPGKIAEGLPVMALNVNHVDVNFFRVKPESLAAFVSQWEYRSSLSNWESD
+ NLLKMADLVYTGRFDLNPARNTREKLLLPLSDIKPLQQAGVYVAVMNQAGHYNYSNAA
+ TLFTLSDIGVSAHRYHNRLDIFTQSLENGAAQSGIEIVLLNDKGQTLAQSTSDAQGHV
+ QLESDKAAALLLARKAGQTTLLDLKLPALDLSEFNVAGAPGYSKQFFMFGPRDLYRPG
+ ETVILNGLLRDSDGKTLPDQPVKLEVVKPDGQVMRTVVSQPENGLYRLNYPLDSRAPT
+ GLWHVRANTGDNVLRTWDFHVEDFMPERMALNLTAQKTPLAPADAVKFSVVGYYLYGA
+ PASGNALQGQLFLRPQRDAVAALPGFQFGNIAEENLSRSLDEVQLSLDKSGRGDVIAA
+ SQWQETHSPLQVILQASLLESGGRPVTRRVEQAIWPADTLPGIRPQFTAKAVYDYRTD
+ ATVNQPIVDEDSNAAFDIVYANAQGEKKAVSGLQVRLIRERRDYYWNWSESEGWQSQF
+ DQKDLVEGEQTLDLNADETGKVSFPVEWGAYRLEVKAPNETVSSVRFWAGYSWQDNSD
+ GSGAARPDRVTLKLDKANYRPGDTMKLHIAAPVAGKGYAMVESSDGPLWWQAIDVPAQ
+ GLDLTIPVDKTWNRHDLYLSTLVVRPGDKSRSATPKRAVGLLHLPLGDENRRLDLALE
+ SPAKMRPNQPLTVRVKASVKHGEMPKQINVLVSAVDSGVLNITDYATPDPWQAFFGQK
+ RYGADIYDIYGQVIEGQGRLAALRFGGDGDALKRGGKPPVNHVNIIAQQAQPITLNEQ
+ GEGVVTLPIGDFNGELRVMAQAWTADDFGRGESKVVVAAPVIAELNMPRFLAGGDVSR
+ LVLDVTNLTDRPQTLNIALAASGLLELLSQQPQPVNLAPGVRTTLFVPVRALEGFGEG
+ ELQATMSGLNLPGETLDAQHKQWKISVRPAWPGQTVNSGIALAPGESWHVPAQHLANV
+ SPATLQGQLLLSGKPPLNLARYIRELKAYPYGCLEQTASGLFPALYTNAAQLQALGIV
+ GDSDEKRRAAVDIGISRVLQMQRDNGGFALWDKNGAEEYWLTAYAMDFLVRAGEQGYS
+ VPPEAINQGNERLLRYLQDPGMMLIRYSDNTQASTFAAQAYAALVLARQQKAPLGALR
+ EIWERRSQAASGLPLMQLGIALKTMGDARRGEEAITLALNTPRQDERQWIADYGSSLR
+ DNALMLSLLEENNLKPDAQNALLSSLSEQAFGQRWLSTQENNALFLAAHSRQASAGAW
+ QAQTSLEAQPLSGDKALTRNLDADQLSALEVTNAGSQPLWLRLDSSGYPSSAPEPASN
+ VLQIERQILGTDGQRKSLSSLRSGELVLVWLTVVADRNVPDALVVDLLPAGLELENQN
+ LADSSASLPESGSEVQNLLNQMQQADIQHMEFRDDRFVAAVAVNEGQPVTLVYLARAV
+ TPGTYQLPQPQVESMYVPQWRATGASEGLLIVTP"
+ misc_feature 338866..343797
+ /locus_tag="SARI_00345"
+ /note="Large extracellular alpha-helical protein [General
+ function prediction only]; Region: COG2373"
+ /db_xref="CDD:225248"
+ misc_feature 340003..340278
+ /locus_tag="SARI_00345"
+ /note="MG2 domain; Region: A2M_N; pfam01835"
+ /db_xref="CDD:216731"
+ misc_feature 342358..343143
+ /locus_tag="SARI_00345"
+ /note="Proteins similar to alpha2-macroglobulin (alpha
+ (2)-M). Alpha (2)-M is a major carrier protein in serum.
+ It is a broadly specific proteinase inhibitor. The
+ structural thioester of alpha (2)-M, is involved in the
+ immobilization and entrapment of...; Region: A2M_like;
+ cd02891"
+ /db_xref="CDD:239221"
+ misc_feature order(342400..342402,342406..342411,342418..342420,
+ 342538..342540,342568..342570,342577..342579,
+ 343102..343104)
+ /locus_tag="SARI_00345"
+ /note="surface patch; other site"
+ /db_xref="CDD:239221"
+ misc_feature 342400..342411
+ /locus_tag="SARI_00345"
+ /note="thioester region; other site"
+ /db_xref="CDD:239221"
+ misc_feature order(342700..342702,342712..342714)
+ /locus_tag="SARI_00345"
+ /note="specificity defining residues; other site"
+ /db_xref="CDD:239221"
+ gene 343801..346116
+ /locus_tag="SARI_00346"
+ CDS 343801..346116
+ /locus_tag="SARI_00346"
+ /inference="protein motif:BlastProDom:IPR001264"
+ /inference="protein motif:HMMPfam:IPR001264"
+ /inference="protein motif:HMMPfam:IPR001460"
+ /inference="protein motif:HMMPfam:IPR009647"
+ /inference="protein motif:HMMTigr:IPR011815"
+ /inference="protein motif:superfamily:IPR012338"
+ /note="penicillin-insensitive
+ transglycosylase/transpeptidase"
+ /codon_start=1
+ /transl_table=11
+ /product="penicillin-binding protein 1C"
+ /protein_id="YP_001569426.1"
+ /db_xref="GI:161502314"
+ /db_xref="InterPro:IPR001264"
+ /db_xref="InterPro:IPR001460"
+ /db_xref="InterPro:IPR009647"
+ /db_xref="InterPro:IPR011815"
+ /db_xref="InterPro:IPR012338"
+ /translation="MNGWRGKRGRWLWLAGAPLFILLALWAADNLWPLPLNEVHPARV
+ VVAHDGTPLWRFADAGGIWRYPVTIEEVSPRYLEALINYEDRWFWRHPGVNPFSVARA
+ AWQDLTAGRVISGGSTLTMQVARLLDPHPRTFGGKIRQLWRALQLEWHLSKRDILTLY
+ LNRAPFGGTLQGIGAASWAYFGKSPARLSYADAALLAVLPQAPSRLRPDRWPARAEAA
+ RNKVLDRMAAQGVWPAETVRESREEPVWLAPRQMPQLAPLFARMMLSKSQSDKIVTTL
+ DAGLQRQLEDLARVWKGRLPARSSLAMIVVDHTDMSVRGWVGSVDLNDDSRFGHVDMV
+ TAIRSPGSVLKPFVYGLALDDALIHPASLLQDVPRRTGDYRPGNFDSGFHGPVSMSDA
+ LVRSLNLPAVQVLEAYGPKRFAAKLRNVGLPLYLPAGAAPNLSLILGGAGARLDEMAA
+ AYSAFARHGKAAKLRLQPDDPLWERSLMSPGAAWIIRRIMADEAQPLPDNALPRIVPL
+ AWKTGTSYGYRDAWAIGVNARYIIGIWTGRPDGTPVVGQIGFASAVPLLNQVNNLLLA
+ HAGRLPEDPRPQSVSRGVICWPGGQSLPAGDSNCRRRLATWLLDDSQPPTLLLPEQEG
+ INGIRFPVWLDDTGLRVAADCPQAREHTFIVWPRPLELWLPSTERRSARLPAESALCP
+ PLQGRNTAPLMLSGVREGAVIRQLPGQENITLPVFTTGGKGRRWWFLNGEPVNSANNS
+ LSLLLNIAGRYQLVVMDESGQVAAVNFELMR"
+ misc_feature 343810..346107
+ /locus_tag="SARI_00346"
+ /note="penicillin-binding protein 1C; Provisional; Region:
+ PRK11240"
+ /db_xref="CDD:183049"
+ misc_feature 343945..344481
+ /locus_tag="SARI_00346"
+ /note="Transglycosylase; Region: Transgly; pfam00912"
+ /db_xref="CDD:201501"
+ misc_feature 344710..345405
+ /locus_tag="SARI_00346"
+ /note="Penicillin binding protein transpeptidase domain;
+ Region: Transpeptidase; cl17760"
+ /db_xref="CDD:248314"
+ misc_feature 345841..346101
+ /locus_tag="SARI_00346"
+ /note="Penicillin-Binding Protein C-terminus Family;
+ Region: BiPBP_C; pfam06832"
+ /db_xref="CDD:219195"
+ gene 346279..348657
+ /locus_tag="SARI_00347"
+ CDS 346279..348657
+ /locus_tag="SARI_00347"
+ /inference="protein motif:HMMPfam:IPR006656"
+ /inference="protein motif:HMMPfam:IPR006657"
+ /inference="protein motif:HMMPfam:IPR006963"
+ /inference="protein motif:HMMTigr:IPR011888"
+ /inference="protein motif:ScanRegExp:IPR006655"
+ /inference="protein motif:superfamily:IPR009010"
+ /note="'KEGG: dsy:DSY0357 3.7e-237 dmsA; putative
+ anaerobic DMSO reductase chain A precursor K00369;
+ COG: COG0243 Anaerobic dehydrogenases, typically
+ selenocysteine-containing;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569427.1"
+ /db_xref="GI:161502315"
+ /db_xref="InterPro:IPR006655"
+ /db_xref="InterPro:IPR006656"
+ /db_xref="InterPro:IPR006657"
+ /db_xref="InterPro:IPR006963"
+ /db_xref="InterPro:IPR009010"
+ /db_xref="InterPro:IPR011888"
+ /translation="MKKITCQGNSEQPAISRRNFIQASSALIALPFVSSTATAQARAV
+ TATENRPAEKVVQTCSTFDCGGKCDIRVHVNEGIVTRISTRPDNALDAQMPVMRACVR
+ GRAYRKFVYHPDRLKYPMKRVGKRGEGKFERISWDEATTLIAANLKSITAKYGPASRY
+ VHVGTAVSGGTFSGDKMVRRLLNLTGGYLESYHSVSMGNTAAATPYTYGTAASGSSLD
+ TLLETKLVILWGHNPTETIFGHTNYFFQKMKQNGTRFIVVDPRYSDTVASLADQWIPL
+ LPTTDNALMDAMMYVIISENLHDRAFIERYAIGFDEGSMPEGVPANESLVAYLTGAKD
+ GVVKSPEWAEKITHVPAQTIRQLARDYANTKPAALIQGWGPQRHNCGERTARGSTLLA
+ TITGNVGIKGGWAAGYGGCANRKFAAGPEMPDNPVKAKISVMNWVQAADDASKVTPDV
+ GLKDADKLESNIRILFSLAGNYLANQNPDLHQAVRVLEDESRIQFIVASDLFMTPSAK
+ YADLLLPETSFMERWNIGETWGTASYLILSEKLIEPEFERRSDYDWLREVAAKLDIEN
+ EFSQGRDEKAWIEHIWEQTRLAMPDENLPDFATLRKTRQHLFKSAPSVAFEDNIRDPD
+ NHPFPTPSGKIEIFSKRLFDMQHPEIPALSHYVPAHEGPEDALAKDFPLQLITWKGKN
+ RANSTQYANPWLIEVQHQKLWINPQDAQKRGIKHGDMVRIHNQRGICEIPAEVTPRII
+ PGVVAMQAGAWWQPDENGIDKGGCANVLSSARITALAKGNSHQTMLVEVAKA"
+ misc_feature 346321..348654
+ /locus_tag="SARI_00347"
+ /note="anaerobic dimethyl sulfoxide reductase, A subunit,
+ DmsA/YnfE family; Region: dmsA_ynfE; TIGR02166"
+ /db_xref="CDD:233756"
+ misc_feature 346447..348267
+ /locus_tag="SARI_00347"
+ /note="This CD (MopB_DmsA-EC) includes the DmsA enzyme of
+ the dmsABC operon encoding the anaerobic dimethylsulfoxide
+ reductase (DMSOR) of Escherichia coli and other related
+ DMSOR-like enzymes. Unlike other DMSOR-like enzymes, this
+ group has a predicted...; Region: MopB_DmsA-EC; cd02770"
+ /db_xref="CDD:239171"
+ misc_feature order(346456..346458,346468..346470,346480..346482,
+ 346576..346578)
+ /locus_tag="SARI_00347"
+ /note="putative [Fe4-S4] binding site [ion binding]; other
+ site"
+ /db_xref="CDD:239171"
+ misc_feature order(346864..346866,346966..346968,346981..346986,
+ 347050..347058,347110..347115,347119..347121,
+ 347395..347400,347407..347409,347683..347685,
+ 347689..347691,347701..347703,347707..347709,
+ 347773..347778,347788..347790,347842..347844,
+ 347929..347931)
+ /locus_tag="SARI_00347"
+ /note="putative molybdopterin cofactor binding site
+ [chemical binding]; other site"
+ /db_xref="CDD:239171"
+ misc_feature 348289..348651
+ /locus_tag="SARI_00347"
+ /note="The MopB_CT_DmsA-EC CD includes the DmsA enzyme of
+ the dmsABC operon encoding the anaerobic dimethylsulfoxide
+ reductase (DMSOR) of Escherichia coli and other related
+ DMSOR-like enzymes. Unlike other DMSOR-like enzymes, this
+ group has a predicted...; Region: MopB_CT_DmsA-EC;
+ cd02794"
+ /db_xref="CDD:239195"
+ misc_feature order(348307..348309,348313..348318,348325..348327,
+ 348331..348339,348520..348522,348574..348576,
+ 348622..348627)
+ /locus_tag="SARI_00347"
+ /note="putative molybdopterin cofactor binding site; other
+ site"
+ /db_xref="CDD:239195"
+ gene 348654..349283
+ /locus_tag="SARI_00348"
+ CDS 348654..349283
+ /locus_tag="SARI_00348"
+ /inference="protein motif:HMMPfam:IPR001450"
+ /inference="protein motif:ScanRegExp:IPR001450"
+ /inference="similar to AA sequence:REFSEQ:NP_461464.1"
+ /note="'KEGG: dsy:DSY0356 6.8e-62 dmsB; putative anaerobic
+ DMSO reductase chain B iron-sulfur subunit K00369;
+ COG: COG0437 Fe-S-cluster-containing hydrogenase
+ components 1;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569428.1"
+ /db_xref="GI:161502316"
+ /db_xref="InterPro:IPR001450"
+ /translation="MSQFTHYPPVSDKQLGFFIDSSRCSGCKACQVACKDKNNLEVGR
+ RFRRVYEVNGGNFIPTGQGGVSNNVFAYTLSISCNHCADPICTKNCPTTAMHKRPGDG
+ IVRVDTDKCVGCGYCAWSCPYGAPQLNDQTGQMSKCDMCVDLQAKGEQPVCVATCPLE
+ AIKFGPIDELRAKYGSVCDVNGLPDSSITKPNLVVKAHHGAEKEGKRHA"
+ misc_feature 348693..349178
+ /locus_tag="SARI_00348"
+ /note="DMSO reductase, iron-sulfur subunit; Region:
+ DMSO_dmsB; TIGR02951"
+ /db_xref="CDD:131996"
+ misc_feature 348963..349028
+ /locus_tag="SARI_00348"
+ /note="4Fe-4S binding domain; Region: Fer4; pfam00037"
+ /db_xref="CDD:215671"
+ gene 349276..350085
+ /locus_tag="SARI_00349"
+ CDS 349276..350085
+ /locus_tag="SARI_00349"
+ /inference="protein motif:HMMPfam:IPR007059"
+ /inference="similar to AA sequence:REFSEQ:NP_457060.1"
+ /note="'KEGG: dsy:DSY4822 9.4e-33 dmsC; putative anaerobic
+ DMSO reductase chain C anchor subunit K00369;
+ COG: COG3302 DMSO reductase anchor subunit;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569429.1"
+ /db_xref="GI:161502317"
+ /db_xref="InterPro:IPR007059"
+ /translation="MHELPLLIFTLCLQGSVGVTLWLALGRQYAVEGREPVRGALPAM
+ AGAFVLACVGLLASALHMGYPLNALNALRHVASSWLSREIVFASLYLAALGLGVVLLF
+ FRKPGWQPLLALAAALGLVDVFCMAQIYIHASVATWQHSNTLALFFGTSGIIGSLVIA
+ LVYLRNAGAAMRCAVVVVALMVLIRLIMQPLWLADINALDTTVVTLPHHPLQALAQLR
+ DVYLLGWCVSAAGMACFAAGGLRNARGALAAGSVLLLIGEIVLRYVFFSIG"
+ misc_feature 349276..350082
+ /locus_tag="SARI_00349"
+ /note="DMSO reductase anchor subunit [General function
+ prediction only]; Region: DmsC; COG3302"
+ /db_xref="CDD:225839"
+ gene 350085..350948
+ /locus_tag="SARI_00350"
+ CDS 350085..350948
+ /locus_tag="SARI_00350"
+ /inference="protein motif:HMMPfam:IPR001450"
+ /inference="protein motif:ScanRegExp:IPR001450"
+ /inference="similar to AA sequence:INSD:CAD02730.1"
+ /note="'KEGG: mth:MTH926 1.5e-08 tungsten
+ formylmethanofuran dehydrogenase, subunit F homolog
+ K00205;
+ COG: COG1145 Ferredoxin;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative polyferredoxin"
+ /protein_id="YP_001569430.1"
+ /db_xref="GI:161502318"
+ /db_xref="InterPro:IPR001450"
+ /translation="MVNLASDPAIDVTQACVRRRFRFSSCRACADVCPAQAFLLTQGQ
+ ASIDMARCIACGDCLFVCPVDAITGIKPVKRFVQGDTLVGPFSLQAPTVDELLLWHSQ
+ YGIRFIDIAVERSAQWLMALAGLNLALRRYGEPCWSFKHVVGTEINVSRRTLFHVPRD
+ TITPCAVEPGKRRLRQAFSAFSECVPEISLEACRMCGACWRSCPENVIQFADDTLTIT
+ AARCTGCGGCAAVCPHQALRLRFDMEPAQTRHIAAHTLTCESCKRTFQALTPEHTRCV
+ LCQHHDFAMRL"
+ misc_feature 350223..350288
+ /locus_tag="SARI_00350"
+ /note="4Fe-4S binding domain; Region: Fer4; pfam00037"
+ /db_xref="CDD:215671"
+ gene complement(350975..351106)
+ /locus_tag="SARI_00352"
+ CDS complement(350975..351106)
+ /locus_tag="SARI_00352"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569431.1"
+ /db_xref="GI:161502320"
+ /translation="MGLMMEKVRSIAMFTSEKCSVVMSGADYKEHPSNCLWMQVTFF"
+ gene 351069..351500
+ /gene="ndk"
+ /locus_tag="SARI_00351"
+ CDS 351069..351500
+ /gene="ndk"
+ /locus_tag="SARI_00351"
+ /inference="protein motif:BlastProDom:IPR001564"
+ /inference="protein motif:FPrintScan:IPR001564"
+ /inference="protein motif:Gene3D:IPR001564"
+ /inference="protein motif:HMMPfam:IPR001564"
+ /inference="protein motif:HMMPIR:IPR012005"
+ /inference="protein motif:HMMSmart:IPR001564"
+ /inference="protein motif:ScanRegExp:IPR001564"
+ /inference="protein motif:superfamily:IPR001564"
+ /inference="similar to AA sequence:INSD:AAV76358.1"
+ /note="catalyzes the formation of nucleoside triphosphate
+ from ATP and nucleoside diphosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="nucleoside diphosphate kinase"
+ /protein_id="YP_001569432.1"
+ /db_xref="GI:161502319"
+ /db_xref="InterPro:IPR001564"
+ /db_xref="InterPro:IPR012005"
+ /translation="MAIERTFSIIKPNAVAKNVIGSIFARFEAAGFRIVGTRMLHLTV
+ EQARGFYAEHDGKPFFDGLVEFMTSGPIVVSVLESENAVQRHRDLLGATNPANALAGT
+ LRADYADSFTENGTHGSDSLESAQREIAFFFGEGEVCPRTR"
+ misc_feature 351078..351467
+ /gene="ndk"
+ /locus_tag="SARI_00351"
+ /note="Nucleoside diphosphate kinase Group I
+ (NDPk_I)-like: NDP kinase domains are present in a large
+ family of structurally and functionally conserved proteins
+ from bacteria to humans that generally catalyze the
+ transfer of gamma-phosphates of a nucleoside...; Region:
+ NDPk_I; cd04413"
+ /db_xref="CDD:239876"
+ misc_feature order(351099..351101,351219..351221,351243..351245,
+ 351327..351329,351345..351347,351378..351380,
+ 351408..351410,351417..351419,351423..351428,
+ 351450..351452)
+ /gene="ndk"
+ /locus_tag="SARI_00351"
+ /note="active site"
+ /db_xref="CDD:239876"
+ misc_feature order(351111..351113,351126..351134,351141..351143,
+ 351150..351152,351177..351185)
+ /gene="ndk"
+ /locus_tag="SARI_00351"
+ /note="multimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:239876"
+ gene 351669..352835
+ /locus_tag="SARI_00353"
+ CDS 351669..352835
+ /locus_tag="SARI_00353"
+ /inference="protein motif:HMMPfam:IPR007197"
+ /inference="protein motif:HMMTigr:IPR004383"
+ /inference="protein motif:superfamily:IPR009063"
+ /inference="similar to AA sequence:INSD:CAD02728.1"
+ /note="23S rRNA m2A2503 methyltransferase; methylates the
+ C2 position of the A2530 nucleotide in 23S rRNA; may be
+ involved in antibiotic resistance"
+ /codon_start=1
+ /transl_table=11
+ /product="ribosomal RNA large subunit methyltransferase N"
+ /protein_id="YP_001569433.1"
+ /db_xref="GI:161502321"
+ /db_xref="InterPro:IPR004383"
+ /db_xref="InterPro:IPR007197"
+ /db_xref="InterPro:IPR009063"
+ /translation="MSEQIVTPESSTPVVSNNEAKINLLDLNRQQMREFFKNLGEKPF
+ RADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIA
+ VGDQRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAA
+ KIVGAAKVTGQRPITNVVMMGMGEPLLNLTNVVPAMEIMLDDFGFGLSKRRVTLSTSG
+ VVPALDKLGDMIDVALAISLHAPNDAIRDEIVPINKKYNIETFLGAVRRYLEKSNANQ
+ GRVTIEYVMLDHVNDGTEHAHQLAELLKETPCKINLIPWNPFPGAPYGRSSNSRIDRF
+ SKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRMQGEAIDIKAI"
+ misc_feature 351720..352832
+ /locus_tag="SARI_00353"
+ /note="ribosomal RNA large subunit methyltransferase N;
+ Provisional; Region: PRK11194"
+ /db_xref="CDD:183031"
+ misc_feature 352050..352652
+ /locus_tag="SARI_00353"
+ /note="Radical SAM superfamily. Enzymes of this family
+ generate radicals by combining a 4Fe-4S cluster and
+ S-adenosylmethionine (SAM) in close proximity. They are
+ characterized by a conserved CxxxCxxC motif, which
+ coordinates the conserved iron-sulfur cluster; Region:
+ Radical_SAM; cd01335"
+ /db_xref="CDD:100105"
+ misc_feature order(352053..352055,352059..352061,352065..352067,
+ 352071..352079,352209..352211,352215..352220,
+ 352311..352319,352377..352379,352509..352511,
+ 352608..352613)
+ /locus_tag="SARI_00353"
+ /note="FeS/SAM binding site; other site"
+ /db_xref="CDD:100105"
+ gene 353128..354093
+ /locus_tag="SARI_00354"
+ CDS 353128..354093
+ /locus_tag="SARI_00354"
+ /inference="protein motif:HMMPfam:IPR001387"
+ /inference="protein motif:HMMSmart:IPR001387"
+ /inference="protein motif:superfamily:IPR010982"
+ /inference="similar to AA sequence:REFSEQ:NP_457056.1"
+ /note="'KEGG: bca:BCE_1379 0.0056 odhB; dihydrolipoamide
+ acetyltransferase K00658;
+ COG: COG1426 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="cytoskeletal protein RodZ"
+ /protein_id="YP_001569434.1"
+ /db_xref="GI:161502322"
+ /db_xref="InterPro:IPR001387"
+ /db_xref="InterPro:IPR010982"
+ /translation="MNTEATHDQNEAQTTGVRLRNAREQLGLSQQAVAERLCLKVSTV
+ RDIEEDKAPSDLASTFLRGYIRSYARLVHVPEEELLPGLEKQAPLRAAKVAPMQNFSL
+ GKRRKKRDGWLMSFTWLVLFVVVGLTGAWWWQNHKAQQEEITTMADQSTAELNADKDS
+ GQGVQLDTRAAASQDTTPAETAPAAPVDSTAAATQNTVVAPSQANVDTAATSATATET
+ SSALPTDQAGVAAPAADSNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQA
+ PYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTINAEPTSAQ"
+ misc_feature 353128..354075
+ /locus_tag="SARI_00354"
+ /note="cytoskeletal protein RodZ; Provisional; Region:
+ PRK10856"
+ /db_xref="CDD:236776"
+ misc_feature 353173..353364
+ /locus_tag="SARI_00354"
+ /note="Helix-turn-helix XRE-family like proteins.
+ Prokaryotic DNA binding proteins belonging to the
+ xenobiotic response element family of transcriptional
+ regulators; Region: HTH_XRE; cd00093"
+ /db_xref="CDD:238045"
+ misc_feature order(353185..353187,353197..353199,353272..353274)
+ /locus_tag="SARI_00354"
+ /note="non-specific DNA binding site [nucleotide binding];
+ other site"
+ /db_xref="CDD:238045"
+ misc_feature order(353194..353196,353269..353271)
+ /locus_tag="SARI_00354"
+ /note="salt bridge; other site"
+ /db_xref="CDD:238045"
+ misc_feature order(353215..353220,353251..353253,353260..353262,
+ 353272..353277)
+ /locus_tag="SARI_00354"
+ /note="sequence-specific DNA binding site [nucleotide
+ binding]; other site"
+ /db_xref="CDD:238045"
+ misc_feature 353842..354069
+ /locus_tag="SARI_00354"
+ /note="Domain of unknown function (DUF4115); Region:
+ DUF4115; pfam13464"
+ /db_xref="CDD:222149"
+ gene 354120..355238
+ /gene="ispG"
+ /locus_tag="SARI_00355"
+ CDS 354120..355238
+ /gene="ispG"
+ /locus_tag="SARI_00355"
+ /inference="protein motif:HMMPfam:IPR004588"
+ /inference="protein motif:HMMTigr:IPR004588"
+ /inference="similar to AA sequence:INSD:AAV76361.1"
+ /note="'catalyzes the conversion of 2C-methyl-D-erythritol
+ 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl
+ diphosphate; involved in isoprenoid synthesis'"
+ /codon_start=1
+ /transl_table=11
+ /product="4-hydroxy-3-methylbut-2-en-1-yl diphosphate
+ synthase"
+ /protein_id="YP_001569435.1"
+ /db_xref="GI:161502323"
+ /db_xref="InterPro:IPR004588"
+ /translation="MHNQAPIQRRKSTRIYVGNVPIGDGAPITVQSMTNTRTTDVEAT
+ VNQIKALERVGADIVRVSVPTMDAAEAFKLIKQQVSVPLVADIHFDYRIALKVAEYGV
+ DCLRINPGNIGNEERIRMVVDCARDKNIPIRIGVNAGSLEKDLQEKYGEPTPQALLES
+ AMRHVDHLDRLNFEQFKVSVKASDVFLAVESYRLLAKQIDQPLHLGITEAGGARSGAV
+ KSAIGLGLLLSEGIGDTLRVSLAADPVEEIKVGFDILKSLRIRARGINFIACPTCSRQ
+ EFDVIGTVNALEQRLEDIITPMDVSIIGCVVNGPGEALVSTLGVTGGNKKSGLYEDGV
+ RKDRLDNDDMIAQLESRIRAKASQLDEARRIDVLQVEK"
+ misc_feature 354120..355196
+ /gene="ispG"
+ /locus_tag="SARI_00355"
+ /note="4-hydroxy-3-methylbut-2-en-1-yl diphosphate
+ synthase; Reviewed; Region: ispG; PRK00366"
+ /db_xref="CDD:234737"
+ misc_feature 354144..>354887
+ /gene="ispG"
+ /locus_tag="SARI_00355"
+ /note="4-hydroxy-3-methylbut-2-en-1-yl diphosphate
+ synthase; Validated; Region: PRK00694"
+ /db_xref="CDD:234812"
+ misc_feature <354864..355106
+ /gene="ispG"
+ /locus_tag="SARI_00355"
+ /note="4-hydroxy-3-methylbut-2-en-1-yl diphosphate
+ synthase; Validated; Region: PRK00694"
+ /db_xref="CDD:234812"
+ gene 355238..355329
+ /locus_tag="SARI_00356"
+ misc_RNA 355238..355329
+ /locus_tag="SARI_00356"
+ /product="SroE RNA"
+ /inference="nucleotide motif:Rfam:RF00371"
+ /note="Rfam score 104.62"
+ gene 355349..356623
+ /gene="hisS"
+ /locus_tag="SARI_00357"
+ CDS 355349..356623
+ /gene="hisS"
+ /locus_tag="SARI_00357"
+ /inference="protein motif:Gene3D:IPR004154"
+ /inference="protein motif:HMMPfam:IPR002314"
+ /inference="protein motif:HMMPfam:IPR004154"
+ /inference="protein motif:HMMPIR:IPR004516"
+ /inference="protein motif:HMMTigr:IPR004516"
+ /inference="protein motif:superfamily:IPR004154"
+ /inference="similar to AA sequence:SwissProt:O52765"
+ /note="'catalyzes a two-step reaction, first charging a
+ histidine molecule by linking its carboxyl group to the
+ alpha-phosphate of ATP, followed by transfer of the
+ aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA
+ synthetase; forms homodimers; some organisms have a
+ paralogous gene, hisZ, that is similar to hisS and
+ produces a protein that performs the first step in
+ histidine biosynthesis along with HisG'"
+ /codon_start=1
+ /transl_table=11
+ /product="histidyl-tRNA synthetase"
+ /protein_id="YP_001569436.1"
+ /db_xref="GI:161502324"
+ /db_xref="InterPro:IPR002314"
+ /db_xref="InterPro:IPR004154"
+ /db_xref="InterPro:IPR004516"
+ /translation="MAKNIQAIRGMNDYLPGETAIWQRIESTLKNVLGSYGYSEIRLP
+ IVEQTPLFKRAIGEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQE
+ QRLWYIGPMFRHERPQKGRYRQFHQLGAEVFGLQGPDIDAELIMLTARWWRALGIAEH
+ VSLELNSIGSLEARANYRDALVAFLEQHQETLDEDCKRRMYTNPLRVLDSKNPDVQAL
+ LNDAPALGDYLDDDSREHFAGLCKLLDAAGIAYTVNQRLVRGLDYYNRTVFEWVTNSL
+ GSQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLERLVLLVQAVNPEFIASPVVDIYLV
+ AAGTETQSAAMTLAERLRDEMPDVKLITNHGGGNFKKQFARADKWGARIALVLGESEV
+ ANGTVVVKDLRSGEQTAVAQDSVAAHLRTLLG"
+ misc_feature 355358..356620
+ /gene="hisS"
+ /locus_tag="SARI_00357"
+ /note="histidyl-tRNA synthetase; Reviewed; Region: hisS;
+ PRK00037"
+ /db_xref="CDD:234586"
+ misc_feature 355400..356299
+ /gene="hisS"
+ /locus_tag="SARI_00357"
+ /note="Class II Histidinyl-tRNA synthetase (HisRS)-like
+ catalytic core domain. HisRS is a homodimer. It is
+ responsible for the attachment of histidine to the 3'
+ OH group of ribose of the appropriate tRNA. This domain is
+ primarily responsible for...; Region: HisRS-like_core;
+ cd00773"
+ /db_xref="CDD:238396"
+ misc_feature order(355415..355417,355451..355453,355466..355486,
+ 355556..355561,355595..355597,355601..355603,
+ 355616..355621,355628..355633,355715..355720,
+ 355739..355741,355763..355765,355775..355777,
+ 355784..355786,356204..356206,356258..356263)
+ /gene="hisS"
+ /locus_tag="SARI_00357"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238396"
+ misc_feature 355460..355486
+ /gene="hisS"
+ /locus_tag="SARI_00357"
+ /note="motif 1; other site"
+ /db_xref="CDD:238396"
+ misc_feature order(355595..355597,355601..355603,355685..355687,
+ 355691..355693,355712..355714,355721..355723,
+ 355727..355729,355739..355741,356123..356125,
+ 356129..356131,356135..356140,356189..356191,
+ 356204..356206,356261..356263,356270..356272,
+ 356279..356281)
+ /gene="hisS"
+ /locus_tag="SARI_00357"
+ /note="active site"
+ /db_xref="CDD:238396"
+ misc_feature 355682..355696
+ /gene="hisS"
+ /locus_tag="SARI_00357"
+ /note="motif 2; other site"
+ /db_xref="CDD:238396"
+ misc_feature order(356258..356272,356279..356281)
+ /gene="hisS"
+ /locus_tag="SARI_00357"
+ /note="motif 3; other site"
+ /db_xref="CDD:238396"
+ misc_feature 356330..356608
+ /gene="hisS"
+ /locus_tag="SARI_00357"
+ /note="HisRS Histidyl-anticodon binding domain. HisRS
+ belongs to class II aminoacyl-tRNA synthetases (aaRS).
+ This alignment contains the anticodon binding domain,
+ which is responsible for specificity in tRNA-binding, so
+ that the activated amino acid is...; Region:
+ HisRS_anticodon; cd00859"
+ /db_xref="CDD:238436"
+ misc_feature order(356354..356359,356468..356470,356486..356488,
+ 356510..356512,356540..356542,356546..356548)
+ /gene="hisS"
+ /locus_tag="SARI_00357"
+ /note="anticodon binding site; other site"
+ /db_xref="CDD:238436"
+ gene 356637..357257
+ /locus_tag="SARI_00358"
+ CDS 356637..357257
+ /locus_tag="SARI_00358"
+ /inference="protein motif:Gene3D:IPR011990"
+ /inference="similar to AA sequence:INSD:AAL21415.1"
+ /note="'COG: COG2976 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569437.1"
+ /db_xref="GI:161502325"
+ /db_xref="InterPro:IPR011990"
+ /translation="MEIYENEHDQVDAIKRFFAENGKALAVGVILGVGALVGWRYWNS
+ HQTESARAASLAYQNAVTAISADKPDSIPAAEKFAAENKNTYGALASMELAQQFVDKN
+ ELKKAETQLQQGLAATSDENLKAVINLRLARVQVQLKQADAALKTLDAIKGEGWTAIV
+ ADLRGEALLSKGDIKGARSAWEAGVNSDASPALSEMMQMKINNLSI"
+ misc_feature 356637..357254
+ /locus_tag="SARI_00358"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG2976"
+ /db_xref="CDD:225523"
+ misc_feature 356664..356786
+ /locus_tag="SARI_00358"
+ /note="Uncharacterized protein conserved in bacteria
+ (DUF2133); Region: DUF2133; pfam09976"
+ /db_xref="CDD:204361"
+ gene 357268..358446
+ /locus_tag="SARI_00359"
+ CDS 357268..358446
+ /locus_tag="SARI_00359"
+ /inference="protein motif:HMMPfam:IPR002372"
+ /inference="protein motif:HMMSmart:IPR002372"
+ /inference="protein motif:superfamily:IPR011047"
+ /inference="similar to AA sequence:INSD:AAO68059.1"
+ /note="'with YaeT, YfiO, and NlpB forms a complex involved
+ in outer membrane protein biogenesis'"
+ /codon_start=1
+ /transl_table=11
+ /product="outer membrane protein assembly complex subunit
+ YfgL"
+ /protein_id="YP_001569438.1"
+ /db_xref="GI:161502326"
+ /db_xref="InterPro:IPR002372"
+ /db_xref="InterPro:IPR011047"
+ /translation="MQLRKLLLPGLLSVTLLSGCSLFSGEEDVVKMSPLPQVENQFTP
+ TTAWSTSVGNGIGDFYSNLHPVMADNVVYAASRAGVVKALNADDGKEIWSVNLGEKDG
+ WFSRSSALLSGGVTVAGGHVYIGSEKALVYALNTSDGTTEWQTKVAGEALSRPVVSDG
+ LVLIHTSNGQLQALNQADGAIKWTVSLDMPSLSLRGESAPATAFGAAIVGGDNGRVSA
+ VLMQQGQMIWQQRISQATGPTEIDRLSDVDTTPVVVNGVVYALAYNGNLTALDLRSGQ
+ IMWKRELGSVNDFIVDGDRIYLVDQNDRVLALTTDGGVTLWTQSDLLHRLLTSPVLYN
+ GDLVVGDSEGYLHWINVDDGRFVAQQKVDSSGFLTEPTVADGKLLIQAKDGTVYAITR
+ "
+ misc_feature 357268..358443
+ /locus_tag="SARI_00359"
+ /note="outer membrane biogenesis protein BamB;
+ Provisional; Region: PRK11138"
+ /db_xref="CDD:236857"
+ misc_feature 357358..358443
+ /locus_tag="SARI_00359"
+ /note="Beta-barrel assembly machinery (Bam) complex
+ component B and related proteins; Region: BamB_YfgL;
+ cd10276"
+ /db_xref="CDD:199834"
+ misc_feature order(357394..357402,357409..357411,357514..357516,
+ 357520..357522,357529..357537,357544..357546,
+ 357664..357666,357670..357672,357679..357687,
+ 357694..357696,357784..357786,357790..357792,
+ 357799..357807,357814..357816,357919..357921,
+ 357925..357927,357934..357942,357949..357951,
+ 358072..358074,358078..358080,358087..358095,
+ 358102..358104,358186..358188,358192..358194,
+ 358201..358209,358216..358218,358309..358311,
+ 358315..358317,358324..358332,358339..358341,
+ 358432..358434,358438..358440)
+ /locus_tag="SARI_00359"
+ /note="Trp docking motif [polypeptide binding]; other
+ site"
+ /db_xref="CDD:199834"
+ gene 358521..360035
+ /gene="engA"
+ /locus_tag="SARI_00360"
+ CDS 358521..360035
+ /gene="engA"
+ /locus_tag="SARI_00360"
+ /inference="protein motif:HMMPfam:IPR002917"
+ /inference="protein motif:HMMTigr:IPR005225"
+ /inference="protein motif:HMMTigr:IPR005289"
+ /inference="similar to AA sequence:INSD:AAV76365.1"
+ /note="EngA; essential Neisserial GTPase; synchronizes
+ cellular events by interacting with multiple targets with
+ tandem G-domains; overexpression in Escherichia coli
+ suppresses rrmJ mutation; structural analysis of the
+ Thermotoga maritima ortholog shows different nucleotide
+ binding affinities in the two binding domains"
+ /codon_start=1
+ /transl_table=11
+ /product="GTP-binding protein EngA"
+ /protein_id="YP_001569439.1"
+ /db_xref="GI:161502327"
+ /db_xref="InterPro:IPR002917"
+ /db_xref="InterPro:IPR005225"
+ /db_xref="InterPro:IPR005289"
+ /translation="MRALSDDFLNEALNMVPVVALVGRPNVGKSTLFNRLTRTRDALV
+ ADFPGLTRDRKYGRAEVEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFM
+ VDARAGLMPADEAIAKHLRSREKPTFLVANKTDGLDPDQAVVDFYSLGLGDIYPIAAS
+ HGRGVLSLLEHVLLPWMDDIAPQEEVDEDAEYWAQFEAEENSEEAPEDDFNPQDLPIK
+ LAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDEREYVLIDTAGVRK
+ RGKITDAVEKFSVIKTLQAIEDANVVLLVIDAREGISDQDLSLLGFILNSGRSLVIVV
+ NKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRR
+ VSTALLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKR
+ YLMNYFRKSLEVMGTPIRIQFKEGENPYANKRNTLTPTQMRKRKRLMKHIKKSK"
+ misc_feature 358569..359948
+ /gene="engA"
+ /locus_tag="SARI_00360"
+ /note="GTP-binding protein Der; Reviewed; Region:
+ PRK00093"
+ /db_xref="CDD:234628"
+ misc_feature 358578..359039
+ /gene="engA"
+ /locus_tag="SARI_00360"
+ /note="EngA1 GTPase contains the first domain of EngA;
+ Region: EngA1; cd01894"
+ /db_xref="CDD:206681"
+ misc_feature 358587..358610
+ /gene="engA"
+ /locus_tag="SARI_00360"
+ /note="G1 box; other site"
+ /db_xref="CDD:206681"
+ misc_feature order(358596..358598,358602..358613,358914..358919,
+ 358923..358925,358992..359000)
+ /gene="engA"
+ /locus_tag="SARI_00360"
+ /note="GTP/Mg2+ binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:206681"
+ misc_feature order(358641..358661,358671..358682)
+ /gene="engA"
+ /locus_tag="SARI_00360"
+ /note="Switch I region; other site"
+ /db_xref="CDD:206681"
+ misc_feature 358671..358673
+ /gene="engA"
+ /locus_tag="SARI_00360"
+ /note="G2 box; other site"
+ /db_xref="CDD:206681"
+ misc_feature order(358725..358742,358803..358808)
+ /gene="engA"
+ /locus_tag="SARI_00360"
+ /note="Switch II region; other site"
+ /db_xref="CDD:206681"
+ misc_feature 358728..358739
+ /gene="engA"
+ /locus_tag="SARI_00360"
+ /note="G3 box; other site"
+ /db_xref="CDD:206681"
+ misc_feature 358914..358925
+ /gene="engA"
+ /locus_tag="SARI_00360"
+ /note="G4 box; other site"
+ /db_xref="CDD:206681"
+ misc_feature 358992..359000
+ /gene="engA"
+ /locus_tag="SARI_00360"
+ /note="G5 box; other site"
+ /db_xref="CDD:206681"
+ misc_feature 359166..359678
+ /gene="engA"
+ /locus_tag="SARI_00360"
+ /note="EngA2 GTPase contains the second domain of EngA;
+ Region: EngA2; cd01895"
+ /db_xref="CDD:206682"
+ misc_feature 359187..359210
+ /gene="engA"
+ /locus_tag="SARI_00360"
+ /note="G1 box; other site"
+ /db_xref="CDD:206682"
+ misc_feature order(359196..359198,359202..359213,359523..359528,
+ 359532..359534,359622..359630)
+ /gene="engA"
+ /locus_tag="SARI_00360"
+ /note="GTP/Mg2+ binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:206682"
+ misc_feature order(359232..359234,359241..359282)
+ /gene="engA"
+ /locus_tag="SARI_00360"
+ /note="Switch I region; other site"
+ /db_xref="CDD:206682"
+ misc_feature 359271..359273
+ /gene="engA"
+ /locus_tag="SARI_00360"
+ /note="G2 box; other site"
+ /db_xref="CDD:206682"
+ misc_feature 359328..359339
+ /gene="engA"
+ /locus_tag="SARI_00360"
+ /note="G3 box; other site"
+ /db_xref="CDD:206682"
+ misc_feature order(359337..359342,359412..359417)
+ /gene="engA"
+ /locus_tag="SARI_00360"
+ /note="Switch II region; other site"
+ /db_xref="CDD:206682"
+ misc_feature 359523..359534
+ /gene="engA"
+ /locus_tag="SARI_00360"
+ /note="G4 box; other site"
+ /db_xref="CDD:206682"
+ misc_feature 359622..359630
+ /gene="engA"
+ /locus_tag="SARI_00360"
+ /note="G5 box; other site"
+ /db_xref="CDD:206682"
+ gene 360097..360345
+ /locus_tag="SARI_00361"
+ CDS 360097..360345
+ /locus_tag="SARI_00361"
+ /inference="protein motif:HMMPfam:IPR010807"
+ /inference="similar to AA sequence:INSD:AAP83330.1"
+ /note="'KEGG: aha:AHA_1764 6.9e-14 ubiquitin ligase sinat5
+ K01932;
+ COG: NOG17950 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569440.1"
+ /db_xref="GI:161502328"
+ /db_xref="InterPro:IPR010807"
+ /translation="MDYALEENVVEITCPVCHRALERNGNAAHCATCVKDFVLQAICP
+ DCRQPLQVLKACGAVDYFCQNGHGLVSKKRVNFVISEQ"
+ misc_feature 360127..360336
+ /locus_tag="SARI_00361"
+ /note="Protein of unknown function (DUF1407); Region:
+ DUF1407; pfam07191"
+ /db_xref="CDD:148664"
+ gene complement(360622..360972)
+ /locus_tag="SARI_00362"
+ CDS complement(360622..360972)
+ /locus_tag="SARI_00362"
+ /inference="similar to AA sequence:REFSEQ:ZP_01536042.1"
+ /note="'COG: NOG18711 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569441.1"
+ /db_xref="GI:161502329"
+ /translation="MDIPELTDDAIVELAREGGVAFIPKLNKQRKIALAPLTASQRQR
+ VSDILKQTLPVGSPPGQVNSPGKGDQRYFRIHIIWTQHQQAQYTDIVILVPENDAPSS
+ LVELWQKGEACICD"
+ gene complement(360973..362058)
+ /locus_tag="SARI_00363"
+ CDS complement(360973..362058)
+ /locus_tag="SARI_00363"
+ /inference="protein motif:Gene3D:IPR013832"
+ /inference="protein motif:Gene3D:IPR013856"
+ /inference="protein motif:HMMPfam:IPR001570"
+ /inference="protein motif:HMMPfam:IPR013856"
+ /inference="protein motif:ScanRegExp:IPR006025"
+ /inference="similar to AA sequence:INSD:ABK56826.1"
+ /note="'KEGG: eca:ECA3211 1.1e-123 prt1; extracellular
+ metalloprotease;
+ COG: COG3227 Zinc metalloprotease (elastase);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569442.1"
+ /db_xref="GI:161502330"
+ /db_xref="InterPro:IPR001570"
+ /db_xref="InterPro:IPR006025"
+ /db_xref="InterPro:IPR013832"
+ /db_xref="InterPro:IPR013856"
+ /translation="MLTIYTTDVLFSVVRNKEIGMNTISCHTVIPPYILRRIIANGSA
+ PQQRCARLTLTHVQTLMAHKPVKSPVAHPAHPGRLERDIYDAKQGQELPGLQVRHEGQ
+ PSNGDIAVDEAYNYLGITHDFFWKIYHRDSLDNKGLALTGTVHYGRDYQNAFWNGQQM
+ VFGDGDGEIFNRFTSSIDVVAHELTHGVTETEAGLIYFGQSGALNESLSDVLGSLVKQ
+ FHLQQTAGQADWIIGEGLLAKGINGKGLRSMAAPGTAYDDPLLGQDPQPAHMQNFIKT
+ REDNGGVHLNSGIPNRAFYLAACQIGGYAWEKAGYAWYDTLCDRNLAQNASFADFAGL
+ TIAHGEKRSGQTVASAIEQAWKTVGVL"
+ misc_feature complement(360976..>361833)
+ /locus_tag="SARI_00363"
+ /note="Zinc metalloprotease (elastase) [Amino acid
+ transport and metabolism]; Region: LasB; COG3227"
+ /db_xref="CDD:225768"
+ misc_feature complement(360979..361818)
+ /locus_tag="SARI_00363"
+ /note="Peptidase M4 family includes thermolysin,
+ protealysin, aureolysin and neutral protease; Region:
+ M4_neutral_protease; cd09597"
+ /db_xref="CDD:189004"
+ misc_feature complement(order(361207..361209,361318..361323,
+ 361441..361443,361468..361470,361501..361503,
+ 361510..361515,361522..361524,361600..361605))
+ /locus_tag="SARI_00363"
+ /note="active site"
+ /db_xref="CDD:189004"
+ misc_feature complement(order(361441..361443,361501..361503,
+ 361513..361515))
+ /locus_tag="SARI_00363"
+ /note="Zn binding site [ion binding]; other site"
+ /db_xref="CDD:189004"
+ gene complement(362076..363440)
+ /gene="xseA"
+ /locus_tag="SARI_00364"
+ CDS complement(362076..363440)
+ /gene="xseA"
+ /locus_tag="SARI_00364"
+ /inference="protein motif:HMMPfam:IPR003753"
+ /inference="protein motif:HMMPfam:IPR004365"
+ /inference="protein motif:HMMTigr:IPR003753"
+ /inference="protein motif:superfamily:IPR008994"
+ /inference="similar to AA sequence:SwissProt:Q5PI54"
+ /note="bidirectionally degrades single-stranded DNA into
+ large acid-insoluble oligonucleotides"
+ /codon_start=1
+ /transl_table=11
+ /product="exodeoxyribonuclease VII large subunit"
+ /protein_id="YP_001569443.1"
+ /db_xref="GI:161502331"
+ /db_xref="InterPro:IPR003753"
+ /db_xref="InterPro:IPR004365"
+ /db_xref="InterPro:IPR008994"
+ /translation="MLSSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFTQPAS
+ GHWYFTLKDDTAQVRCAMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESM
+ QPAGEGLLQQKYEQLKAKLQAEGLFDQQYKHPLPSPAYCVGVITSKTGAALHDILHVL
+ KRRDPSLPVIIYPAAVQGEDAPGQIVRAITLANARKECDVLIVGRGGGSLEDLWSFND
+ ERVARAIFASTIPVVSAVGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQMQT
+ ACQRLEMAMDYYLANRQRRFSQLYHRLQQQHPQLRLARQQTTLERLRQRMHLALENQL
+ KQANQRQQRASQRLRQQNPQPRIHRAQSRIQQLEYRLAENFRARLSEQRERFGNTVTH
+ LEAVSPLATLARGYSVSTATDGNVLKKVKQLKVGDMMTTRLKDGWVTSEVTAIKPVKK
+ IRLG"
+ misc_feature complement(362115..363410)
+ /gene="xseA"
+ /locus_tag="SARI_00364"
+ /note="exodeoxyribonuclease VII, large subunit; Region:
+ xseA; TIGR00237"
+ /db_xref="CDD:161783"
+ misc_feature complement(363123..363356)
+ /gene="xseA"
+ /locus_tag="SARI_00364"
+ /note="ExoVII_LU_OBF: A subfamily of OB folds
+ corresponding to the N-terminal OB-fold domain of
+ Escherichia coli exodeoxyribonuclease VII (ExoVII) large
+ subunit. E. coli ExoVII is composed of two non-identical
+ subunits. E. coli ExoVII is a...; Region: ExoVII_LU_OBF;
+ cd04489"
+ /db_xref="CDD:239935"
+ misc_feature complement(order(363132..363134,363192..363194,
+ 363198..363200,363204..363206,363348..363350))
+ /gene="xseA"
+ /locus_tag="SARI_00364"
+ /note="generic binding surface II; other site"
+ /db_xref="CDD:239935"
+ misc_feature complement(order(363147..363155,363180..363188,
+ 363207..363209,363252..363254,363258..363266,
+ 363282..363284,363288..363299,363327..363335))
+ /gene="xseA"
+ /locus_tag="SARI_00364"
+ /note="generic binding surface I; other site"
+ /db_xref="CDD:239935"
+ gene 363517..365067
+ /locus_tag="SARI_00365"
+ CDS 363517..365067
+ /locus_tag="SARI_00365"
+ /inference="protein motif:HMMPanther:IPR001093"
+ /inference="protein motif:HMMPfam:IPR000644"
+ /inference="protein motif:HMMPfam:IPR001093"
+ /inference="protein motif:HMMSmart:IPR000644"
+ /inference="protein motif:HMMTigr:IPR005990"
+ /inference="protein motif:ScanRegExp:IPR001093"
+ /inference="similar to AA sequence:REFSEQ:YP_217496.1"
+ /note="catalyzes the synthesis of xanthosine monophosphate
+ by the NAD+ dependent oxidation of inosine monophosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="inosine 5'-monophosphate dehydrogenase"
+ /protein_id="YP_001569444.1"
+ /db_xref="GI:161502332"
+ /db_xref="InterPro:IPR000644"
+ /db_xref="InterPro:IPR001093"
+ /db_xref="InterPro:IPR005990"
+ /translation="MQKSVDATDYVLYNAAAIFINLPGEILPMLRIAKEALTFDDVLL
+ VPAHSTVLPNTADLSTQLTKTIRLNIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNM
+ SIERQAEEVRRVKKHESGVVTDPQTVLPTTTLHEVKALTERNGFAGYPVVTEDNELVG
+ IITGRDVRFVTDLNQPVSVYMTPKERLVTVREGEAREVVLAKMHEKRVEKALVVDDNF
+ HLLGMITVKDFQKAERKPNSCKDEQGRLRVGAAVGAGAGNEERVDALVAAGVDVLLID
+ SSHGHSEGVLQRIRETRAKYPDLQIIGGNVATGAGARALAEAGCSAVKVGIGPGSICT
+ TRIVTGVGVPQITAVSDAVEALEGTGIPVIADGGIRFSGDIAKAIAAGASAVMVGSML
+ AGTEESPGEIELYQGRSYKSYRGMGSLGAMSKGSSDRYFQSDNAADKLVPEGIEGRVA
+ YKGRLKEIIHQQMGGLRSCMGLTGCATIDELRTKAEFVRISGAGIQESHVHDVTITKE
+ SPNYRLGS"
+ misc_feature 363601..365061
+ /locus_tag="SARI_00365"
+ /note="inosine 5'-monophosphate dehydrogenase;
+ Reviewed; Region: PRK05567"
+ /db_xref="CDD:235507"
+ misc_feature 363622..>363864
+ /locus_tag="SARI_00365"
+ /note="TIM barrel proteins share a structurally conserved
+ phosphate binding motif and in general share an eight
+ beta/alpha closed barrel structure. Specific for this
+ family is the conserved phosphate binding site at the
+ edges of strands 7 and 8. The phosphate...; Region:
+ TIM_phosphate_binding; cl17186"
+ /db_xref="CDD:247740"
+ misc_feature 363880..364212
+ /locus_tag="SARI_00365"
+ /note="This cd contains two tandem repeats of the
+ cystathionine beta-synthase (CBS pair) domains in the
+ inosine 5' monophosphate dehydrogenase (IMPDH)
+ protein. IMPDH is an essential enzyme that catalyzes the
+ first step unique to GTP synthesis, playing a...; Region:
+ CBS_pair_IMPDH; cd04601"
+ /db_xref="CDD:239974"
+ misc_feature <364243..364986
+ /locus_tag="SARI_00365"
+ /note="IMPDH: The catalytic domain of the inosine
+ monophosphate dehydrogenase. IMPDH catalyzes the
+ NAD-dependent oxidation of inosine 5'-monophosphate
+ (IMP) to xanthosine 5' monophosphate (XMP). It is a
+ rate-limiting step in the de novo synthesis of...; Region:
+ IMPDH; cd00381"
+ /db_xref="CDD:238223"
+ misc_feature order(364507..364515,364612..364614,364618..364620,
+ 364681..364686,364753..364755,364759..364767,
+ 364843..364848)
+ /locus_tag="SARI_00365"
+ /note="active site"
+ /db_xref="CDD:238223"
+ gene 365137..366714
+ /gene="guaA"
+ /locus_tag="SARI_00366"
+ CDS 365137..366714
+ /gene="guaA"
+ /locus_tag="SARI_00366"
+ /inference="protein motif:HMMPfam:IPR000991"
+ /inference="protein motif:HMMPfam:IPR001674"
+ /inference="protein motif:HMMPfam:IPR004506"
+ /inference="protein motif:HMMTigr:IPR001674"
+ /inference="protein motif:HMMTigr:IPR004739"
+ /inference="protein motif:ScanRegExp:IPR012998"
+ /inference="similar to AA sequence:REFSEQ:NP_804218.1"
+ /note="contains glutamine-hydrolyzing domain and glutamine
+ amidotransferase; GMP-binding domain; functions to produce
+ GMP from XMP in the IMP pathway"
+ /codon_start=1
+ /transl_table=11
+ /product="GMP synthase"
+ /protein_id="YP_001569445.1"
+ /db_xref="GI:161502333"
+ /db_xref="InterPro:IPR000991"
+ /db_xref="InterPro:IPR001674"
+ /db_xref="InterPro:IPR004506"
+ /db_xref="InterPro:IPR004739"
+ /db_xref="InterPro:IPR012998"
+ /translation="MTDNIHKHRILILDFGSQYTQLVARRVRELGVYCELWAWDVTEA
+ QIREFNPSGIILSGGPESTTEENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEG
+ SNEREFGYAQVEVLTDSALIRGIEDSLTADGKPLLDVWMSHGDKVTAIPSDFVTVAST
+ ESCPFAIMANEEKRFYGVQFHPEVTHTRQGMRMLERFVRDICQCEALWTPAKIIDDAV
+ ARIREQVGDDKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLNEAEQVMDM
+ FGDHFGLNIVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQ
+ GTIYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLELG
+ LPYDMLYRHPFPGPGLGVRVLGEVKKEYCDLLRRADAIFIEELRKADLYDKVSQAFTV
+ FLPVRSVGVMGDGRKYDWVVSLRAVETIDFMTAHWAHLPYGFLGRVSNRIINEVNGIS
+ RVVYDISGKPPATIEWE"
+ misc_feature 365149..366711
+ /gene="guaA"
+ /locus_tag="SARI_00366"
+ /note="GMP synthase; Reviewed; Region: guaA; PRK00074"
+ /db_xref="CDD:234614"
+ misc_feature 365164..365730
+ /gene="guaA"
+ /locus_tag="SARI_00366"
+ /note="Type 1 glutamine amidotransferase (GATase1) domain
+ found in GMP synthetase; Region: GATase1_GMP_Synthase;
+ cd01742"
+ /db_xref="CDD:153213"
+ misc_feature order(365185..365190,365308..365316,365392..365397,
+ 365560..365562,365677..365679)
+ /gene="guaA"
+ /locus_tag="SARI_00366"
+ /note="AMP/PPi binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:153213"
+ misc_feature order(365311..365313,365395..365397)
+ /gene="guaA"
+ /locus_tag="SARI_00366"
+ /note="candidate oxyanion hole; other site"
+ /db_xref="CDD:153213"
+ misc_feature order(365392..365394,365677..365679,365683..365685)
+ /gene="guaA"
+ /locus_tag="SARI_00366"
+ /note="catalytic triad [active]"
+ /db_xref="CDD:153213"
+ misc_feature order(365404..365406,365563..365565,365671..365673)
+ /gene="guaA"
+ /locus_tag="SARI_00366"
+ /note="potential glutamine specificity residues [chemical
+ binding]; other site"
+ /db_xref="CDD:153213"
+ misc_feature 365821..366708
+ /gene="guaA"
+ /locus_tag="SARI_00366"
+ /note="The C-terminal domain of GMP synthetase. It
+ contains two subdomains; the ATP pyrophosphatase domain
+ which closes to the N-termial and the dimerization domain
+ at C-terminal end. The ATP-PPase is a twisted,
+ five-stranded parallel beta-sheet sandwiched...; Region:
+ GMP_synthase_C; cd01997"
+ /db_xref="CDD:238955"
+ misc_feature order(365821..365895,365899..365931,365935..365967,
+ 365998..366111,366127..366171,366175..366177,
+ 366202..366231,366244..366318,366334..366378)
+ /gene="guaA"
+ /locus_tag="SARI_00366"
+ /note="ATP Binding subdomain [chemical binding]; other
+ site"
+ /db_xref="CDD:238955"
+ misc_feature order(365833..365841,365845..365856,365908..365910,
+ 365914..365916,366277..366279)
+ /gene="guaA"
+ /locus_tag="SARI_00366"
+ /note="Ligand Binding sites [chemical binding]; other
+ site"
+ /db_xref="CDD:238955"
+ misc_feature order(366403..366441,366466..366495,366502..366534,
+ 366544..366591,366610..366636,366640..366708)
+ /gene="guaA"
+ /locus_tag="SARI_00366"
+ /note="Dimerization subdomain; other site"
+ /db_xref="CDD:238955"
+ gene complement(366839..367612)
+ /locus_tag="SARI_00367"
+ CDS complement(366839..367612)
+ /locus_tag="SARI_00367"
+ /inference="similar to AA sequence:REFSEQ:NP_931775.1"
+ /note="'COG: NOG22997 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569446.1"
+ /db_xref="GI:161502334"
+ /translation="MKLDFRIEHEFGSSESIKPVELATLFQGVTKQLDELLGTKRSWY
+ EQGYSRKQALQYKIFTEEGISEDVLDRWEMEYKKDYPNWTTGIWDGGSDEDSAGVDCY
+ PSYSSTHRRKNPLNLVVSFSIDLSQTRLNVEKMINFLSFLLHSTNNCTYSCVESGGYS
+ FSEIIPKENGYDEVYKKLFPDRISCGWMLFIPAIILPDLIPDAARIVPVLNGNKQIGT
+ IVVSTEEIFDGNNKEHQGKANDIEIKLLDLGLLPLMTEL"
+ gene complement(367756..368838)
+ /locus_tag="SARI_00368"
+ CDS complement(367756..368838)
+ /locus_tag="SARI_00368"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:REFSEQ:ZP_00725515.1"
+ /note="'COG: COG3335 Transposase and inactivated
+ derivatives;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569447.1"
+ /db_xref="GI:161502335"
+ /db_xref="InterPro:IPR009057"
+ /translation="MLPAMKIFITAQQKTELERLHDSSRDGRVRDRIKAILLASEGWS
+ SAMIAQALRLHQTTVDHHISEFLNKGKLKPENGGSDSKLSAEQRAFLISQLSNNLFHH
+ TSDIIAFFSRTWDIVFSVPGMNKWLHRNGFTYKKPSGVPHKFSEEKQRQFIEYYEELK
+ ATAGDEPVLFIDAVHPTQATKISYGWIRKGHKKAVKTTGSRTRLNIMGTLNLKTLATP
+ LICEYKTINEYNVSTCAVGNANLKICIRGNVINVNGKLSIHVDALGFYLKDTYDFLDD
+ NKLGIDIPECLGIWGKNRILNKIDTASYMTSYASGSFGILVQLYSGFVPVFNSDFREW
+ QKKTTLVEITSFFLMYYGLLHLIKIG"
+ misc_feature complement(368629..368757)
+ /locus_tag="SARI_00368"
+ /note="Homeodomain-like domain; Region: HTH_23; pfam13384"
+ /db_xref="CDD:222091"
+ misc_feature complement(368446..368745)
+ /locus_tag="SARI_00368"
+ /note="Winged helix-turn helix; Region: HTH_29; pfam13551"
+ /db_xref="CDD:222216"
+ misc_feature complement(368371..368547)
+ /locus_tag="SARI_00368"
+ /note="Winged helix-turn helix; Region: HTH_33; pfam13592"
+ /db_xref="CDD:222248"
+ misc_feature complement(<368137..368340)
+ /locus_tag="SARI_00368"
+ /note="DDE superfamily endonuclease; Region: DDE_3;
+ pfam13358"
+ /db_xref="CDD:222070"
+ gene complement(368896..369456)
+ /locus_tag="SARI_00369"
+ CDS complement(368896..369456)
+ /locus_tag="SARI_00369"
+ /inference="similar to AA sequence:INSD:ABG70793.1"
+ /note="'COG: NOG23066 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569448.1"
+ /db_xref="GI:161502336"
+ /translation="MKINLFNLFRKKNKLQDDFPVTQFSALPKKGEGYPSFFSLEKNN
+ IYAHSACFMIKPDDISFIEHLVELFFHAKVKVSEIKEKFADHDKVLICYKFKEFEQEV
+ VRLITNDNEFINCLCEKGLEPPDPECVFPDKDFGTYGSLQGDMEFWWHVYWKPFWESL
+ KEEERKQYLERSNLSIGTIEFLEHHH"
+ gene complement(369446..370330)
+ /locus_tag="SARI_00370"
+ CDS complement(369446..370330)
+ /locus_tag="SARI_00370"
+ /inference="similar to AA sequence:INSD:ABG70792.1"
+ /note="'COG: NOG31152 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569449.1"
+ /db_xref="GI:161502337"
+ /translation="MTEHSTLTNETPHSTYDITGMLMPARAFFFVVVDEPGKDGFLVR
+ KIYASNSDPYLSKMDLSEAKMLSETNPERYGLIPKDFSASYSVAEHVMGNNASAYIST
+ SSAFPQGSPRFEGKTIIVDIDKAVRSGAKLISTAEILKSLDEYKNQNPHLGKRIDKIS
+ KYVNDIDKEVLLHGEKIPAAAIFTPETLKYTKYFTRAARVVQVTGIVFTAYDLEQASE
+ KSLKNGSVKPITAEAIRQAGGWGMAVAGAKIGTVAGAAVGIETGPGAALTGLIGGIIF
+ GTAGYFGADWVADHIDEN"
+ gene complement(370331..372802)
+ /locus_tag="SARI_00371"
+ CDS complement(370331..372802)
+ /locus_tag="SARI_00371"
+ /inference="protein motif:HMMPfam:IPR006533"
+ /inference="protein motif:HMMTigr:IPR006533"
+ /inference="similar to AA sequence:INSD:ABP58869.1"
+ /note="'COG: COG3501 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569450.1"
+ /db_xref="GI:161502338"
+ /db_xref="InterPro:IPR006533"
+ /translation="MDNWSALFDGQTRYGLDINDSTMKADVLRFRGREALSEPFNWDI
+ EFTTLQANIPPEQVLMKYASFRMRNGKNVHGMVTRLEWLSTSRDQSHYRLTLSSRLTL
+ LGYTRQCAVYQNQSVPEVVEQVLRKHGLEGPDFEFRLERTYPARELITQWQETDLQFI
+ QRILSEVGIYWRTMMDDVRGLDTYILADSQLNYQFDVQLPYSEPSGLFDGAAESVWDV
+ RTWHNIATGTVATRNYNYRTATTPMDATVSVRNDAVTTGEHYRYAAPYRVAGDDASPE
+ PETESGAFYARIHHERELNRSARIHLFSNAAHLTPGQVLEPQGDAITALKEGVILTQV
+ TYRGARDSRLHVSVWGLPYTERYCFRPVEVPRPVIPGTLPARIESREKNDIYAHLDEQ
+ GRYRVKLDFDREGTESGYGYLWLRMAKPYAGETLGWHTPLIDGTEVAIAYSNGDIDLP
+ YIAYALHDSEHPDHVTRDNHTRNVLRTPANNKLRMEDRRGEEHVRLATEYGKTQLNSG
+ HLVDAQGQRRGTGAELRTDEWGTIRAGKGLFVSADAQAKAQGEVLDMDAALKEIDRLN
+ QQLQQLEMAAEKAQALKADVDSQIQMFEQRLKPLSEVVLFSAPEGMALTSGEHLQMTA
+ TKNVAMNAGGNFSAGVMGNLTALAGEKLGLFARTGQLSLKVSEGPVEVQAQNASMRLF
+ AEKKLTLSSASDISFAGKKRITLVGGGSYLRLEAGKVEYGTTATYLRRVKRTMFAGAH
+ STPTSSVLMPLVEDLIKDGFFDEQFRILNDSGKPMANVPYFISTESGETFKGVTDNQG
+ LCKRVFSKEASKLTVWLGVQALERW"
+ misc_feature complement(371300..372730)
+ /locus_tag="SARI_00371"
+ /note="Rhs element Vgr protein; Region: vgr_GE; TIGR01646"
+ /db_xref="CDD:233505"
+ misc_feature complement(371780..372706)
+ /locus_tag="SARI_00371"
+ /note="Phage late control gene D protein (GPD); Region:
+ Phage_GPD; pfam05954"
+ /db_xref="CDD:218824"
+ misc_feature complement(371402..371650)
+ /locus_tag="SARI_00371"
+ /note="Phage-related baseplate assembly protein; Region:
+ Phage_base_V; pfam04717"
+ /db_xref="CDD:218225"
+ misc_feature complement(371075..371392)
+ /locus_tag="SARI_00371"
+ /note="Putative type VI secretion system Rhs element Vgr;
+ Region: T6SS_Vgr; pfam13296"
+ /db_xref="CDD:205476"
+ misc_feature complement(370394..371146)
+ /locus_tag="SARI_00371"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG4253"
+ /db_xref="CDD:226704"
+ gene 373548..373781
+ /locus_tag="SARI_00372"
+ CDS 373548..373781
+ /locus_tag="SARI_00372"
+ /inference="protein motif:HMMPfam:IPR003756"
+ /inference="similar to AA sequence:REFSEQ:YP_050337.1"
+ /note="'COG: NOG23217 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569451.1"
+ /db_xref="GI:161502339"
+ /db_xref="InterPro:IPR003756"
+ /translation="MKVETISYVKKNAATLDLSEPILVTQNGVPAYVIESYDQQQERE
+ NTIALLKLLTLSEKDKAEGRVFSKDQLLDGFAD"
+ misc_feature 373548..373754
+ /locus_tag="SARI_00372"
+ /note="Antitoxin Phd_YefM, type II toxin-antitoxin system;
+ Region: PhdYeFM_antitox; pfam02604"
+ /db_xref="CDD:217137"
+ gene 373812..374144
+ /locus_tag="SARI_00373"
+ CDS 373812..374144
+ /locus_tag="SARI_00373"
+ /inference="similar to AA sequence:REFSEQ:YP_050336.1"
+ /note="'COG: NOG36091 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569452.1"
+ /db_xref="GI:161502340"
+ /translation="MKQQVTFEYTLTVKHCIDTIAGFLRRVDVEPRPVIADILTQFES
+ AVAQFPLGCQIYPELLKIGCAKYREFNHAEGYRVLHSVDGALVTAHAILAHRQDVQQL
+ LFKRLIMA"
+ gene 374683..374838
+ /locus_tag="SARI_00374"
+ CDS 374683..374838
+ /locus_tag="SARI_00374"
+ /inference="protein motif:Gene3D:IPR011990"
+ /inference="similar to AA sequence:INSD:CAD08375.1"
+ /note="'COG: COG0790 FOG: TPR repeat, SEL1 subfamily;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569453.1"
+ /db_xref="GI:161502341"
+ /db_xref="InterPro:IPR011990"
+ /translation="MYAASDYVIPDYKLAIKWLEKSVKQGAYFSYFVIGYHYNYGKNF
+ PLNKKTR"
+ misc_feature <374683..>374808
+ /locus_tag="SARI_00374"
+ /note="FOG: TPR repeat, SEL1 subfamily [General function
+ prediction only]; Region: COG0790"
+ /db_xref="CDD:223861"
+ gene 374835..375095
+ /locus_tag="SARI_00375"
+ CDS 374835..375095
+ /locus_tag="SARI_00375"
+ /inference="protein motif:Gene3D:IPR011990"
+ /inference="protein motif:HMMPfam:IPR006597"
+ /inference="protein motif:HMMSmart:IPR006597"
+ /note="'KEGG: noc:Noc_2705 0.00024 Sel1-like repeat
+ protein K01467;
+ COG: COG0790 FOG: TPR repeat, SEL1 subfamily;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569454.1"
+ /db_xref="GI:161502342"
+ /db_xref="InterPro:IPR006597"
+ /db_xref="InterPro:IPR011990"
+ /translation="MKWYRKAAVLGGFTQEILGDACMYGNGIPQNTQMGLAWYRKAAE
+ RGWLKRKKLLLVCICEAKGYRRITNKCFAGIPESRKPSCRND"
+ misc_feature <374835..>374972
+ /locus_tag="SARI_00375"
+ /note="FOG: TPR repeat, SEL1 subfamily [General function
+ prediction only]; Region: COG0790"
+ /db_xref="CDD:223861"
+ misc_feature 374886..374972
+ /locus_tag="SARI_00375"
+ /note="Sel1 repeat; Region: Sel1; cl02723"
+ /db_xref="CDD:243158"
+ gene complement(375359..375550)
+ /locus_tag="SARI_00376"
+ CDS complement(375359..375550)
+ /locus_tag="SARI_00376"
+ /inference="similar to AA sequence:INSD:AAL21400.1"
+ /note="'COG: NOG13900 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569455.1"
+ /db_xref="GI:161502343"
+ /translation="MSQANSMRKRHRFNTRMTRIVLLISFLFFFGRFVYSSIGAWQHH
+ QDKKEAQQSTLSVNTPGQR"
+ misc_feature complement(375380..375526)
+ /locus_tag="SARI_00376"
+ /note="Protein of unknown function (DUF2633); Region:
+ DUF2633; pfam11119"
+ /db_xref="CDD:220988"
+ gene 375964..378177
+ /locus_tag="SARI_00377"
+ CDS 375964..378177
+ /locus_tag="SARI_00377"
+ /inference="protein motif:HMMPfam:IPR001633"
+ /inference="protein motif:HMMPfam:IPR007895"
+ /inference="protein motif:HMMSmart:IPR000160"
+ /inference="protein motif:HMMSmart:IPR001633"
+ /note="'KEGG: shn:Shewana3_3829 5.3e-23 diguanylate
+ cyclase/phosphodiesterase with PAS/PAC sensor(s) K01745;
+ COG: COG2199 FOG: GGDEF domain;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569456.1"
+ /db_xref="GI:161502344"
+ /db_xref="InterPro:IPR000160"
+ /db_xref="InterPro:IPR001633"
+ /db_xref="InterPro:IPR007895"
+ /translation="MKLNKTYINIRDKWWGLPLLLPSILLPVLSSANTYAHTSTGNVV
+ LFYLPLAFMFSLMLFFGWAALPGIVIAIFWRTYPQMGLYETLSVTMHFIITIVLSWGG
+ YRVFAPRRNNVSHGDARLIFQRMFWQVFCSATLFLVIYQCAAFVGMYESKSSLMGIMP
+ FNINTLINYQALLVGNLIGVPLCYFIIRTIRNPLHLRGYYQQLKLQVDSKTTKKEIVI
+ WLAVLITLMFILCMPLTDNSSIFSTNYTLSLLLPVMLWGAMHYGYKFISIIWAFVLIT
+ SIHYYQRYMPWYSGYDTQLAITSSSYLVFSFIVNYMAVLATRQRVVSSRARRLAYLDP
+ VVHLPNLRALNRALKNAPCSTLCFLHVPGLELLGKNYGVMLRIQYKQKLSHWITQMLA
+ SNECVYQMSGHDLVLRLNTESYQQRIEALDKHIKQFRFIWDGLPLQPPVGVSYCCVRS
+ PVSHLYLLLGELGTSSDLSLTTNAPEDLQRRGAVHLQRDLKGRVAMMNRLQQALEHDH
+ FFLMAQPISGVRGDVYHEILLRLRDENGDVINPDNFLPVAHEFGLSSAIDLWVIENTL
+ RFIATSREYMPAHRFAVNLSPTSVCRAPFPSEVNQLLTQYQVEPWQLVFEVTESNSLT
+ NADQAQLTLGQLQQFGCQIAIDDFGTGYASYARLKNVNADILKIDGSFIRNIVSNSLD
+ YQIVSSICHLARMKKMQVVAEYVESEEIRSAVLSLGIDYLQGYLIGEPQPLSEIQ"
+ misc_feature 376057..376923
+ /locus_tag="SARI_00377"
+ /note="MASE1; Region: MASE1; pfam05231"
+ /db_xref="CDD:218514"
+ misc_feature 376945..377355
+ /locus_tag="SARI_00377"
+ /note="diguanylate cyclase; Region: GGDEF; smart00267"
+ /db_xref="CDD:128563"
+ misc_feature 377455..378168
+ /locus_tag="SARI_00377"
+ /note="EAL domain. This domain is found in diverse
+ bacterial signaling proteins. It is called EAL after its
+ conserved residues and is also known as domain of unknown
+ function 2 (DUF2). The EAL domain has been shown to
+ stimulate degradation of a second...; Region: EAL;
+ cd01948"
+ /db_xref="CDD:238923"
+ gene complement(378213..379754)
+ /locus_tag="SARI_00378"
+ CDS complement(378213..379754)
+ /locus_tag="SARI_00378"
+ /inference="protein motif:HMMPfam:IPR003695"
+ /inference="similar to AA sequence:SwissProt:P0A269"
+ /note="'KEGG: sty:STY2743 1.0e-273 ppx; exopolyphosphatase
+ K01514;
+ COG: COG0248 Exopolyphosphatase;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="exopolyphosphatase"
+ /protein_id="YP_001569457.1"
+ /db_xref="GI:161502345"
+ /db_xref="InterPro:IPR003695"
+ /translation="MPIYDKSPRPQEFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQR
+ VHLADGLGADNKLSEEAMERGLSCLSLFAERLQGFSPSSVCIVGTHTLRQAQNAADFL
+ KRAEKVIPYPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPR
+ LVESRRMGCVSFAQLYFPGGVINKENFQRARMAAAQKLETLTWQYRIQGWNVAMGASG
+ TIKAAHEVLLALGEKDGFITPERLDELKSEVLKHRSFNALSLPGLSEERKAVFVPGLA
+ ILCGVFDALAIRELRLSDGALREGVLYEMEGRFRHQDVRSRTAKSLANQYNIDREQAR
+ RVLETTMQMYEQWQAQQPKLAHPQLEALLRWAAMLHEVGLNINHSGLHRHSAYILQHS
+ DLPGFNQEQQMMMATLVRYHRKAVKLDDMPRFTLFKKKQYLPLIQLLRLGVLLNNQRQ
+ ATTTPPTLRLTTNDNHWTLCFPHDWFSQNALVLLDLEKEQQYWEAVTGWRLNIEEENS
+ PEIAA"
+ misc_feature complement(378216..379754)
+ /locus_tag="SARI_00378"
+ /note="exopolyphosphatase; Provisional; Region: PRK10854"
+ /db_xref="CDD:182781"
+ misc_feature complement(379242..379715)
+ /locus_tag="SARI_00378"
+ /note="Nucleotide-Binding Domain of the sugar
+ kinase/HSP70/actin superfamily; Region:
+ NBD_sugar-kinase_HSP70_actin; cd00012"
+ /db_xref="CDD:212657"
+ misc_feature complement(order(379317..379328,379392..379394,
+ 379683..379685,379689..379691,379695..379706))
+ /locus_tag="SARI_00378"
+ /note="nucleotide binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:212657"
+ gene complement(379759..381825)
+ /locus_tag="SARI_00379"
+ CDS complement(379759..381825)
+ /locus_tag="SARI_00379"
+ /inference="protein motif:HMMPfam:IPR003414"
+ /note="catalyzes the reversible transfer of the terminal
+ phosphate of ATP to form a long chain polyphosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="polyphosphate kinase"
+ /protein_id="YP_001569458.1"
+ /db_xref="GI:161502346"
+ /db_xref="InterPro:IPR003414"
+ /translation="MGQEKLYIEKELSWLAFNERVLQEAADKSNPLIERMRFLGIYSN
+ NLDEFYKVRFAELKRRIIISEEQGSNSHSRHLLGKIQSRVLKADQEFDGLYNELLLEM
+ ARNQIFLINERQLSVNQQSWLRHYFKHYLRQHITPILINRETDLVQFLKDDYTYLAVE
+ IIRGDTINYALLEIPSDKVPRFVNLPPETPRRRKPMILLDNILRYCLDDIFKGFFDYD
+ ALNAYSMKMTRDAEYDLVHEMESSLMELMSSSLKQRLTAEPVRFVYQRDMPAALVDVL
+ REKLTISRYDSIVPGGRYHNFKDFINFPNVGKANLVNKPLPRLRHLWFDKEKFRNGFD
+ AIRERDVLLYYPYHTFEHVLELLRQASFDPSVLAIKINIYRVAKDSRIIDSMIHAAHN
+ GKKVTVVVELQARFDEEANIHWAKRLTEAGVHVIFSAPGLKIHAKLFLISRREGYDVV
+ RYAHIGTGNFNEKTARLYTDYSLLTADARITNEVRRVFNFIENPYRPVTFDYLMVSPQ
+ NSRRLLYEMIDREIANAQQGLPSGITLKLNNLVDKGLVDRLYAASGSGVQVNLLVRGM
+ CSLIPQLEGISDNIRAISIVDRYLEHDRVYIFVNGGDKQVWLSSADWMTRNIDYRIEV
+ ATPILDPRLKQQVLDIIDILFSDTVKARFIDKELSNRYVPRGNRRKVQAQLAIYDYIK
+ SLEQPD"
+ misc_feature complement(379762..381822)
+ /locus_tag="SARI_00379"
+ /note="Polyphosphate kinase [Inorganic ion transport and
+ metabolism]; Region: Ppk; COG0855"
+ /db_xref="CDD:223924"
+ misc_feature complement(381493..381810)
+ /locus_tag="SARI_00379"
+ /note="Polyphosphate kinase N-terminal domain; Region:
+ PP_kinase_N; pfam13089"
+ /db_xref="CDD:205270"
+ misc_feature complement(380854..381471)
+ /locus_tag="SARI_00379"
+ /note="Polyphosphate kinase middle domain; Region:
+ PP_kinase; pfam02503"
+ /db_xref="CDD:217072"
+ misc_feature complement(380350..380835)
+ /locus_tag="SARI_00379"
+ /note="Catalytic domain of phospholipase D superfamily
+ proteins; Region: PLDc_SF; cl15239"
+ /db_xref="CDD:246902"
+ misc_feature complement(order(380416..380418,380449..380451,
+ 380455..380457,380515..380517,380521..380523))
+ /locus_tag="SARI_00379"
+ /note="putative active site [active]"
+ /db_xref="CDD:197200"
+ misc_feature complement(380521..380523)
+ /locus_tag="SARI_00379"
+ /note="catalytic site [active]"
+ /db_xref="CDD:197200"
+ misc_feature complement(379834..380328)
+ /locus_tag="SARI_00379"
+ /note="Catalytic C-terminal domain, second repeat, of
+ Escherichia coli polyphosphate kinase 1 and similar
+ proteins; Region: PLDc_EcPPK1_C2_like; cd09167"
+ /db_xref="CDD:197264"
+ misc_feature complement(order(379906..379908,379915..379920,
+ 379927..379932,379939..379941,379948..379950,
+ 379954..379968,379996..380004,380041..380061,
+ 380302..380304,380317..380328))
+ /locus_tag="SARI_00379"
+ /note="domain interface [polypeptide binding]; other site"
+ /db_xref="CDD:197264"
+ misc_feature complement(order(379957..379959,379963..379965,
+ 379990..379992,379996..379998,380044..380046,
+ 380050..380052,380056..380058,380134..380136))
+ /locus_tag="SARI_00379"
+ /note="active site"
+ /db_xref="CDD:197264"
+ misc_feature complement(380050..380052)
+ /locus_tag="SARI_00379"
+ /note="catalytic site [active]"
+ /db_xref="CDD:197264"
+ gene complement(382014..382652)
+ /gene="purN"
+ /locus_tag="SARI_00380"
+ CDS complement(382014..382652)
+ /gene="purN"
+ /locus_tag="SARI_00380"
+ /inference="protein motif:Gene3D:IPR002376"
+ /inference="protein motif:HMMPfam:IPR002376"
+ /inference="protein motif:HMMPIR:IPR004607"
+ /inference="protein motif:HMMTigr:IPR004607"
+ /inference="protein motif:ScanRegExp:IPR001555"
+ /inference="protein motif:superfamily:IPR002376"
+ /inference="similar to AA sequence:INSD:CAD02702.1"
+ /note="glycinamide ribonucleotide transformylase; GAR
+ Tfase; catalyzes the synthesis of
+ 5'-phosphoribosylformylglycinamide from
+ 5'-phosphoribosylglycinamide and
+ 10-formyltetrahydrofolate; PurN requires formyl folate for
+ the reaction unlike PurT which uses formate"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphoribosylglycinamide formyltransferase"
+ /protein_id="YP_001569459.1"
+ /db_xref="GI:161502347"
+ /db_xref="InterPro:IPR001555"
+ /db_xref="InterPro:IPR002376"
+ /db_xref="InterPro:IPR004607"
+ /translation="MNIVVLISGNGSNLQAIIDACEAKKLKGTLRAVFSNKADAFGLE
+ RAREAGIPAQALTADRFDSRDAFDRALIREIDAYAPDVVVLAGFMRILSPAFVAHYHG
+ RLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFADD
+ SEEDITARVQTQEHAIYPLVIGWFAEGRLKMRDNAAWLDGRRLPPQGYASDE"
+ misc_feature complement(382056..382652)
+ /gene="purN"
+ /locus_tag="SARI_00380"
+ /note="phosphoribosylglycinamide formyltransferase;
+ Reviewed; Region: purN; PRK05647"
+ /db_xref="CDD:235544"
+ misc_feature complement(382101..382649)
+ /gene="purN"
+ /locus_tag="SARI_00380"
+ /note="Phosphoribosylglycinamide formyltransferase (GAR
+ transformylase, GART); Region: FMT_core_GART; cd08645"
+ /db_xref="CDD:187714"
+ misc_feature complement(order(382134..382136,382221..382226,
+ 382233..382238,382242..382244,382302..382304,
+ 382326..382337,382362..382364,382377..382400,
+ 382611..382619,382632..382634))
+ /gene="purN"
+ /locus_tag="SARI_00380"
+ /note="active site"
+ /db_xref="CDD:187714"
+ misc_feature complement(order(382134..382136,382326..382328,
+ 382332..382334,382392..382397,382614..382619))
+ /gene="purN"
+ /locus_tag="SARI_00380"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:187714"
+ misc_feature complement(order(382221..382226,382233..382238,
+ 382335..382337,382362..382364,382377..382385,
+ 382389..382391,382398..382400))
+ /gene="purN"
+ /locus_tag="SARI_00380"
+ /note="cosubstrate binding site; other site"
+ /db_xref="CDD:187714"
+ misc_feature complement(order(382221..382223,382329..382331,
+ 382335..382337))
+ /gene="purN"
+ /locus_tag="SARI_00380"
+ /note="catalytic site [active]"
+ /db_xref="CDD:187714"
+ gene complement(382652..383704)
+ /locus_tag="SARI_00381"
+ CDS complement(382652..383704)
+ /locus_tag="SARI_00381"
+ /inference="protein motif:HMMPfam:IPR000728"
+ /inference="protein motif:HMMPfam:IPR010918"
+ /inference="protein motif:HMMTigr:IPR004733"
+ /inference="similar to AA sequence:REFSEQ:NP_461434.2"
+ /note="catalyzes the formation of
+ 1-(5-phosphoribosyl)-5-aminoimidazole from
+ 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in
+ purine biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphoribosylaminoimidazole synthetase"
+ /protein_id="YP_001569460.1"
+ /db_xref="GI:161502348"
+ /db_xref="InterPro:IPR000728"
+ /db_xref="InterPro:IPR004733"
+ /db_xref="InterPro:IPR010918"
+ /translation="MGNQAVTDKTSLSYKDAGVDIDAGNALVDRIKGVVKKTRRPEVM
+ GGLGGFGALCALPQKYREPVLVSGTDGVGTKLRLAMDLKRHDAIGIDLVAMCVNDLVV
+ QGAEPLFFLDYYATGKLDVDTAASVINGIAEGCLQSGCALVGGETAEMPGMYHGEDYD
+ VAGFCVGVVEKSEIIDGSRVAEGDVLIALGSSGPHSNGYSLVRKIIDVSGCDPQTTQL
+ EGKPLADHLLEPTRIYVKSVLELIENIDVHAIAHLTGGGFWENIPRVLPENTQAIINE
+ SSWQWPAIFTWLQTAGNVSRHEMYRTFNCGVGMVIALSAPEADKALALLNEKGENAWQ
+ IGIIKASDSEQRVVIK"
+ misc_feature complement(382691..383671)
+ /locus_tag="SARI_00381"
+ /note="phosphoribosylaminoimidazole synthetase;
+ Provisional; Region: PRK05385"
+ /db_xref="CDD:235439"
+ misc_feature complement(382688..383530)
+ /locus_tag="SARI_00381"
+ /note="PurM (Aminoimidazole Ribonucleotide [AIR]
+ synthetase), one of eleven enzymes required for purine
+ biosynthesis, catalyzes the conversion of
+ formylglycinamide ribonucleotide (FGAM) and ATP to AIR,
+ ADP, and Pi, the fifth step in de novo purine
+ biosynthesis; Region: PurM; cd02196"
+ /db_xref="CDD:100032"
+ misc_feature complement(order(382913..382915,383213..383215,
+ 383225..383230,383249..383251,383255..383257,
+ 383267..383269,383360..383362,383369..383371,
+ 383378..383380,383396..383398,383408..383410,
+ 383474..383476,383492..383494,383498..383500,
+ 383504..383515))
+ /locus_tag="SARI_00381"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:100032"
+ misc_feature complement(order(383267..383275,383408..383410))
+ /locus_tag="SARI_00381"
+ /note="putative ATP binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:100032"
+ gene 384099..384725
+ /gene="upp"
+ /locus_tag="SARI_00382"
+ CDS 384099..384725
+ /gene="upp"
+ /locus_tag="SARI_00382"
+ /inference="protein motif:HMMPfam:IPR000836"
+ /inference="protein motif:HMMTigr:IPR005765"
+ /inference="similar to AA sequence:INSD:CAD02700.1"
+ /note="Catalyzes the formation of uracil and
+ 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and
+ diphosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="uracil phosphoribosyltransferase"
+ /protein_id="YP_001569461.1"
+ /db_xref="GI:161502349"
+ /db_xref="InterPro:IPR000836"
+ /db_xref="InterPro:IPR005765"
+ /translation="MKIVEVKHPLVKHKLGLMRENDISTKRFRELASEVGSLLTYEAT
+ ADLETEKVTIEGWNGPVEIDQIKGKKITVVPILRAGLGMMEGVLENVPSARISVVGMY
+ RNEETLEPVPYFQKLVSNIDERMALIVDPMLATGGSVIATIDLLKKAGCSSIKVLVLV
+ AAPEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGTK"
+ misc_feature 384282..384647
+ /gene="upp"
+ /locus_tag="SARI_00382"
+ /note="Phosphoribosyl transferase (PRT)-type I domain;
+ Region: PRTases_typeI; cd06223"
+ /db_xref="CDD:206754"
+ misc_feature order(384327..384329,384333..384335,384486..384494,
+ 384498..384512,384582..384584)
+ /gene="upp"
+ /locus_tag="SARI_00382"
+ /note="active site"
+ /db_xref="CDD:206754"
+ gene 384813..386102
+ /locus_tag="SARI_00383"
+ CDS 384813..386102
+ /locus_tag="SARI_00383"
+ /inference="protein motif:HMMPfam:IPR006043"
+ /inference="protein motif:HMMTigr:IPR006042"
+ /inference="protein motif:ScanRegExp:IPR006042"
+ /inference="similar to AA sequence:REFSEQ:YP_149695.1"
+ /note="'KEGG: bcz:BCZK0244 1.3e-07 guanine-hypoxanTHIne
+ permease; xanTHIne/uracil permease family protein K06901;
+ COG: COG2233 XanTHIne/uracil permeases;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="uracil transporter"
+ /protein_id="YP_001569462.1"
+ /db_xref="GI:161502350"
+ /db_xref="InterPro:IPR006042"
+ /db_xref="InterPro:IPR006043"
+ /translation="MTRRAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLFHINPA
+ TVLLFNGIGTLLYLFICKGKIPAYLGSSFAFISPVLLLLPLGYEVALGGFIMCGVLFC
+ LVSFIVKKAGTGWLDVMFPPAAMGAIVAVIGLELAGVAAGMAGLLTAQGQSPDTKTII
+ ISMATLAVTVFGSVLFRGFLAIIPILIGVLAGYALSFALGVVDTTPIAQAHWFALPTF
+ YTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLVRDPGLHRSMFANGLSTIV
+ SGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQIIPLPVM
+ GGVSLLLYGVIGASGIRVLIESKVDYNKAQNLILTSVILIIGVSGAKVHIGAAELKGM
+ ALATIVGIGLSLIFKLISLLRPEEVVLEANDTQPPHQ"
+ misc_feature 384816..386099
+ /locus_tag="SARI_00383"
+ /note="uracil transporter; Provisional; Region: PRK10720"
+ /db_xref="CDD:236744"
+ gene 386173..386898
+ /locus_tag="SARI_00384"
+ CDS 386173..386898
+ /locus_tag="SARI_00384"
+ /inference="protein motif:HMMPfam:IPR013317"
+ /inference="similar to AA sequence:INSD:AAL21390.1"
+ /note="'controls initiation of DNA replication by
+ inhibiting re-initiation of replication, promotes
+ hydrolysis of DnaA-bound ATP'"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA replication initiation factor"
+ /protein_id="YP_001569463.1"
+ /db_xref="GI:161502351"
+ /db_xref="InterPro:IPR013317"
+ /translation="MQSWVEVSLNTPAQLSLPLYLPDDETFASFWPGDNASLLAALQN
+ VLRQEHSGYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGME
+ HLSLVCIDNIECVAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLAS
+ RLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQ
+ LDHASITAQRKLTIPFVKEILKL"
+ misc_feature 386185..>386892
+ /locus_tag="SARI_00384"
+ /note="ATPase involved in DNA replication initiation [DNA
+ replication, recombination, and repair]; Region: DnaA;
+ COG0593"
+ /db_xref="CDD:223666"
+ misc_feature 386191..386895
+ /locus_tag="SARI_00384"
+ /note="DNA replication initiation factor; Provisional;
+ Region: PRK08084"
+ /db_xref="CDD:181224"
+ gene complement(386925..387305)
+ /locus_tag="SARI_00385"
+ CDS complement(386925..387305)
+ /locus_tag="SARI_00385"
+ /inference="protein motif:Gene3D:IPR012335"
+ /inference="protein motif:HMMPfam:IPR006660"
+ /inference="protein motif:HMMTigr:IPR006659"
+ /inference="protein motif:superfamily:IPR012336"
+ /inference="similar to AA sequence:INSD:AAV76385.1"
+ /note="'KEGG: mca:MCA2520 1.2e-32 arsC; arsenate
+ reductase;
+ COG: COG1393 Arsenate reductase and related proteins,
+ glutaredoxin family;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569464.1"
+ /db_xref="GI:161502352"
+ /db_xref="InterPro:IPR006659"
+ /db_xref="InterPro:IPR006660"
+ /db_xref="InterPro:IPR012335"
+ /db_xref="InterPro:IPR012336"
+ /translation="MASQGELMTDTIKIYHNPRCSKSRDTLNLLKSNGVEPEVVLYLD
+ TPADGATVRELLRMLGMSSARELMRQKEDLYKTLHLADSQLSEEALIQALVEHPKLME
+ RPIVVANGQARIGRPPEQVLEILG"
+ misc_feature complement(386934..387272)
+ /locus_tag="SARI_00385"
+ /note="Arsenate Reductase (ArsC) family, ArsC subfamily;
+ arsenic reductases similar to that encoded by arsC on the
+ R733 plasmid of Escherichia coli. E. coli ArsC catalyzes
+ the reduction of arsenate [As(V)] to arsenite [As(III)],
+ the first step in the...; Region: ArsC_ArsC; cd03034"
+ /db_xref="CDD:239332"
+ misc_feature complement(386934..387263)
+ /locus_tag="SARI_00385"
+ /note="ArsC family; Region: ArsC; pfam03960"
+ /db_xref="CDD:202832"
+ misc_feature complement(order(386958..386960,386997..386999,
+ 387099..387101,387246..387248))
+ /locus_tag="SARI_00385"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:239332"
+ gene complement(387324..388787)
+ /locus_tag="SARI_00386"
+ CDS complement(387324..388787)
+ /locus_tag="SARI_00386"
+ /inference="protein motif:Gene3D:IPR011990"
+ /inference="protein motif:HMMPfam:IPR001915"
+ /inference="protein motif:HMMPfam:IPR011717"
+ /inference="protein motif:HMMPfam:IPR013105"
+ /inference="similar to AA sequence:INSD:AAL21388.1"
+ /note="'KEGG: eci:UTI89_C2810 6.6e-238 yfgC; hypothetical
+ protein YfgC precursor;
+ COG: COG4783 Putative Zn-dependent protease, contains TPR
+ repeats;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569465.2"
+ /db_xref="GI:448236192"
+ /db_xref="InterPro:IPR001915"
+ /db_xref="InterPro:IPR011717"
+ /db_xref="InterPro:IPR011990"
+ /db_xref="InterPro:IPR013105"
+ /translation="MFRQLKKNLVATLIAAVALGQVAPAFADPADTLPDMGTSAGSTL
+ SIGQEMQMGDFYVRQLRGSAPLINDPLLVQYINALGMRLVSHADSVKTPFHFFLINND
+ EINAFAFFGGNVVLHSALFRYADNESQLASVMAHEISHVTQRHLARAMEDQKRSAPLT
+ WVGALGSILLAMASPQAGMAALTGTLAGTRQGMISFTQQNEQEADRIGIQVLQRAGFD
+ PQAMPSFLEKLLDQARYSTRPPEILLTHPLPESRLADARNRANQMHPVVVQSSSDFYL
+ AKARTLGMYNSGRNQLTSDLLEQWSKGNVRQQHAAQYGRALQAMEAGKYDEARKTLQP
+ LLSAEPNNAWYLDLATDIDLGQKRANDAINRLKNARDLRVNPVLQLNLANAYLQGGQP
+ KAAETILNRYTFSHKDDGNGWDLLAQAEAALNNRDQELAARAEGYALAGRLDQAISLL
+ SSASSLAKLGSQQQARYDARIDQLRQLQERFKPYTKM"
+ misc_feature complement(387330..388787)
+ /locus_tag="SARI_00386"
+ /note="Putative Zn-dependent protease, contains TPR
+ repeats [General function prediction only]; Region:
+ COG4783"
+ /db_xref="CDD:227122"
+ misc_feature complement(388026..388670)
+ /locus_tag="SARI_00386"
+ /note="Peptidase family M48; Region: Peptidase_M48;
+ cl12018"
+ /db_xref="CDD:245838"
+ gene 388995..390062
+ /locus_tag="SARI_00387"
+ CDS 388995..390062
+ /locus_tag="SARI_00387"
+ /inference="protein motif:HMMPfam:IPR002549"
+ /inference="similar to AA sequence:INSD:AAL21387.1"
+ /note="'KEGG: tbd:Tbd_2668 2.0e-28
+ phosphoribosylaminoimidazole-succinocarboxamide (SAICAR)
+ synthetase K01923;
+ COG: COG0628 Predicted permease;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569466.1"
+ /db_xref="GI:161502354"
+ /db_xref="InterPro:IPR002549"
+ /translation="MLEMLMQWYRRRFSDPEAIALLVILVAGFSILFFFSGLLAPLLV
+ AIVLAYLLEWPTARLQAIGCSRRWATSIVLILFVGILLLMAFVVMPIAWQQGIYLIRD
+ MPGMLNKLSDFAATLPRRYPALMDAGIIDAMAENMRTRMLNMGDSVVKYSLASLVGLL
+ TLAVYLVLVPLMVFFLVKDKEQMLNAVRRVLPRNRGLAGQVWNEMNQQITNYIRGKVL
+ EMVVVGVATWLVFLLFGLNYSLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGT
+ EFWSCFAVYLIIQALDGNLLVPVLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPL
+ ATLIKAVVHAWPDGQVTDTSS"
+ misc_feature 389004..390041
+ /locus_tag="SARI_00387"
+ /note="Predicted permease, member of the PurR regulon
+ [General function prediction only]; Region: yhhT; COG0628"
+ /db_xref="CDD:223701"
+ misc_feature 389151..390032
+ /locus_tag="SARI_00387"
+ /note="Domain of unknown function DUF20; Region: UPF0118;
+ pfam01594"
+ /db_xref="CDD:216594"
+ gene 390340..391527
+ /locus_tag="SARI_00388"
+ CDS 390340..391527
+ /locus_tag="SARI_00388"
+ /inference="protein motif:HMMPfam:IPR008599"
+ /inference="similar to AA sequence:REFSEQ:YP_217476.1"
+ /note="'KEGG: shn:Shewana3_2682 2.6e-60 transcriptional
+ regulator, CdaR K01694;
+ COG: COG3835 Sugar diacid utilization regulator;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569467.1"
+ /db_xref="GI:161502355"
+ /db_xref="InterPro:IPR008599"
+ /translation="MRVLRKHYLKGYTARQIVQRAMKIIPYSVNVMDEHGVIIASGEP
+ SRLHQRHEGAILALKENRIVEIDSATANQLKGVRSGINLPISFHEQLIGVVGITGEPE
+ QVRAYAELVKMAAELVIEHMVLIEQRQWDKRYREELINQLILRENSTESLRSMAAYLG
+ IDLAVPRVVLIIELSQPDREALRNVMDYFENHARNHLVTFTEFNELIIIKPITLKEGK
+ WNTRQEMGELQMFKSWAASSGFSRILVGGYFAGETGLHRSLLTARATQAMAKRQKLRS
+ QYIFYHDHALPALLSGLSERWQVQELSRLWLQLAQHDAKGVLQQTLRTWFEHNCDLTQ
+ TAKALHIHVNTLRYRLQRCEDITHIKINELKSTLWLYIGMELQAESVPTDKLPLPGWN
+ EIC"
+ misc_feature 390361..391467
+ /locus_tag="SARI_00388"
+ /note="Sugar diacid utilization regulator [Transcription /
+ Signal transduction mechanisms]; Region: CdaR; COG3835"
+ /db_xref="CDD:226355"
+ misc_feature 390364..390768
+ /locus_tag="SARI_00388"
+ /note="Putative sugar diacid recognition; Region:
+ Diacid_rec; pfam05651"
+ /db_xref="CDD:147680"
+ misc_feature 391300..391467
+ /locus_tag="SARI_00388"
+ /note="PucR C-terminal helix-turn-helix domain; Region:
+ HTH_30; pfam13556"
+ /db_xref="CDD:205734"
+ gene 391574..392863
+ /locus_tag="SARI_00389"
+ CDS 391574..392863
+ /locus_tag="SARI_00389"
+ /inference="protein motif:HMMPfam:IPR004680"
+ /inference="similar to AA sequence:REFSEQ:YP_149700.1"
+ /note="'KEGG: eci:UTI89_C3106 6.5e-19 ygbN; hypothetical
+ permease YgbN K03299;
+ COG: COG2610 H+/gluconate symporter and related permeases;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative permease"
+ /protein_id="YP_001569468.1"
+ /db_xref="GI:161502356"
+ /db_xref="InterPro:IPR004680"
+ /translation="MLKEALYMTSISTLGAIAALVVAIVLILRRVSPAYGMMAGALVG
+ GLIGGADLLQTVSLMVSGAQGIVNAVLRILAAGVLAGVLIESGAANTIAETVVRKVGE
+ TRALLALAIATLCLTAVGVFIDVAVITVAPIALSIARNADLSKSAILLAMIGGGKAGN
+ VMSPNPNAIAASDAFHVPLTSIMLAGVVPGIVGLIIAYLLAKRLNNKGVGVADHEVTH
+ HDDTVARPGFLVAISAPLVAIFLLSLRPFAGISIDPLIALPVGGLVGLLLMGRARHCN
+ QYMVAGLMRMAPVAIMLLGTGTLAGIIANSELKDVLIHGLTASGLPSWLLAPVSGAMM
+ SMATASTTAGTAVASGVFSPTLLELGVSALAGAAMIHAGATVLDHLPHGSFFHATGGS
+ VNMQIHERLKLMPYETLVGLTITFISTLMFGFFGFAG"
+ misc_feature 391733..392848
+ /locus_tag="SARI_00389"
+ /note="H+/gluconate symporter and related permeases
+ [Carbohydrate transport and metabolism / Amino acid
+ transport and metabolism]; Region: GntT; COG2610"
+ /db_xref="CDD:225330"
+ misc_feature 391739..>392194
+ /locus_tag="SARI_00389"
+ /note="fructuronate transporter; Provisional; Region:
+ PRK10034; cl15264"
+ /db_xref="CDD:246912"
+ gene 392869..394008
+ /locus_tag="SARI_00390"
+ CDS 392869..394008
+ /locus_tag="SARI_00390"
+ /inference="protein motif:HMMPanther:IPR004381"
+ /inference="protein motif:HMMPfam:IPR004381"
+ /inference="protein motif:HMMTigr:IPR004381"
+ /inference="similar to AA sequence:REFSEQ:YP_149701.1"
+ /note="'KEGG: spt:SPA0377 4.9e-194 putative glycerate
+ kinase K00865;
+ COG: COG1929 Glycerate kinase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569469.1"
+ /db_xref="GI:161502357"
+ /db_xref="InterPro:IPR004381"
+ /translation="MKIVIAPDSFKESLSAMAVAEAIEKGFREIYPDADYVKVPMADG
+ GEGTVQSMVEASGGRYVDQWVQGPLGQPVTARWGMLGDSDTAVIEMAAASGLHHVSPE
+ LRNPLNTTSYGTGELIVAALERGVKRIILGIGGSATNDGGAGMMQALGVILRDKQGRS
+ LPPGGEALAALASIDLSGCHPLLRQVSITVACDVNNPLCGPQGASAVFGPQKGATAEM
+ MDTLDAALENWGRHIYLATGREVVNAPGAGAAGGMGAALLGLLNAELRAGVEIVVETL
+ QLEQAVEDADLVITGEGRLDSQSICGKTPIGVARVAKRYNKPVIALAGGLQHDHHVVY
+ QQGIDAALSILSHIVTLPEALHEAEYNLSLSARNVAAIWRLARQA"
+ misc_feature 392869..394002
+ /locus_tag="SARI_00390"
+ /note="Glycerate kinase [Carbohydrate transport and
+ metabolism]; Region: COG1929"
+ /db_xref="CDD:224840"
+ gene complement(394053..394523)
+ /gene="bcp"
+ /locus_tag="SARI_00391"
+ CDS complement(394053..394523)
+ /gene="bcp"
+ /locus_tag="SARI_00391"
+ /inference="protein motif:Gene3D:IPR012335"
+ /inference="protein motif:HMMPfam:IPR013740"
+ /inference="protein motif:superfamily:IPR012336"
+ /inference="similar to AA sequence:INSD:AAO68086.1"
+ /note="bacterioferritin comigratory protein; thiol
+ peroxidase; thioredoxin-dependent; hydroperoxide
+ peroxidase; in Escherichia coli this enzyme preferentially
+ reduces linoleic acid hydroperoxide; contains an active
+ site cysteine"
+ /codon_start=1
+ /transl_table=11
+ /product="thioredoxin-dependent thiol peroxidase"
+ /protein_id="YP_001569470.1"
+ /db_xref="GI:161502358"
+ /db_xref="InterPro:IPR012335"
+ /db_xref="InterPro:IPR012336"
+ /db_xref="InterPro:IPR013740"
+ /translation="MNPLKAGDIAPKFSLPDQDGEQVNLTDFQGQRVLVYFYPKAMTP
+ GCTVQACGLRDNMDELKKAGVDVLGISTDKPEKLSRFAEKELLNFTLLSDENHQVCEQ
+ FGVWGEKSFMGKTYDGIHRISFLIDADGKIEHVFNDFKTSNHHDVVLNWLKENA"
+ misc_feature complement(<394119..394505)
+ /gene="bcp"
+ /locus_tag="SARI_00391"
+ /note="Peroxiredoxin [Posttranslational modification,
+ protein turnover, chaperones]; Region: AhpC; COG0450"
+ /db_xref="CDD:223527"
+ misc_feature complement(394074..394502)
+ /gene="bcp"
+ /locus_tag="SARI_00391"
+ /note="Peroxiredoxin (PRX) family, Bacterioferritin
+ comigratory protein (BCP) subfamily; composed of
+ thioredoxin-dependent thiol peroxidases, widely expressed
+ in pathogenic bacteria, that protect cells against
+ toxicity from reactive oxygen species by reducing...;
+ Region: PRX_BCP; cd03017"
+ /db_xref="CDD:239315"
+ misc_feature complement(order(394161..394163,394386..394388,
+ 394395..394397))
+ /gene="bcp"
+ /locus_tag="SARI_00391"
+ /note="catalytic triad [active]"
+ /db_xref="CDD:239315"
+ gene complement(394523..395095)
+ /locus_tag="SARI_00392"
+ CDS complement(394523..395095)
+ /locus_tag="SARI_00392"
+ /inference="protein motif:HMMPfam:IPR002912"
+ /inference="similar to AA sequence:REFSEQ:NP_461425.1"
+ /note="'KEGG: eci:UTI89_C2806 1.2e-66 gcvR; glycine
+ cleavage system transcriptional repressor K03567;
+ COG: COG2716 Glycine cleavage system regulatory protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569471.2"
+ /db_xref="GI:448236193"
+ /db_xref="InterPro:IPR002912"
+ /translation="MTPSSQHYLVITALGADRPGIVNTITRHVSSCGCNIEDSRLAML
+ GDEFTFIMLLSGTWNAITLIESTLPLKGAELDLLIVMKRTSDRPRPAMPATVWVQVEV
+ ADSPHLIERFTALFDSHEMNIAELVSRTQPAEGDKAAQLFIQITAHSPASQNSANIEQ
+ AFKALCTELNAQGSINVVNYSQHDEQDGVK"
+ misc_feature complement(394526..395095)
+ /locus_tag="SARI_00392"
+ /note="glycine cleavage system transcriptional repressor;
+ Provisional; Region: gcvR; PRK11589"
+ /db_xref="CDD:236935"
+ misc_feature complement(394844..395074)
+ /locus_tag="SARI_00392"
+ /note="ACT domains that comprise the Glycine Cleavage
+ System Transcriptional Repressor (GcvR) protein, and other
+ related domains; Region: ACT_GcvR_1; cd04893"
+ /db_xref="CDD:153165"
+ misc_feature complement(394568..394804)
+ /locus_tag="SARI_00392"
+ /note="ACT domains are commonly involved in specifically
+ binding an amino acid or other small ligand leading to
+ regulation of the enzyme; Region: ACT; cl09141"
+ /db_xref="CDD:245020"
+ gene 395241..396119
+ /locus_tag="SARI_00393"
+ CDS 395241..396119
+ /locus_tag="SARI_00393"
+ /inference="protein motif:BlastProDom:IPR002220"
+ /inference="protein motif:FPrintScan:IPR002220"
+ /inference="protein motif:Gene3D:IPR013785"
+ /inference="protein motif:HMMPfam:IPR002220"
+ /inference="protein motif:HMMPIR:IPR002220"
+ /inference="protein motif:HMMTigr:IPR005263"
+ /inference="protein motif:ScanRegExp:IPR002220"
+ /inference="similar to AA sequence:INSD:AAX66390.1"
+ /note="catalyzes the formation of dihydrodipicolinate from
+ L-aspartate 4-semialdehyde and pyruvate in lysine and
+ diaminopimelate biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="dihydrodipicolinate synthase"
+ /protein_id="YP_001569472.1"
+ /db_xref="GI:161502360"
+ /db_xref="InterPro:IPR002220"
+ /db_xref="InterPro:IPR005263"
+ /db_xref="InterPro:IPR013785"
+ /translation="MFTGSIVALVTPMDEKGNVSRSCLKKLIDYHVANGTSAIVSVGT
+ TGESATLSHDEHGDVVMMTLELADGRIPVIAGTGANATAEAISLTQRFNDSGVVGCLT
+ VTPYYNRPTQEGLFQHFKAIAEHTDLPQILYNVPSRTGCDMLPETVGRLAEIKNIIAI
+ KEATGNLTRVHQIKELVSDDFILLSGDDASALDFMQLGGHGVISVTANVAARDMADMC
+ KLAAEGQFTEARVINQRLMPLHNKLFVEPNPIPVKWACKALGLVATDTLRLPMTPITD
+ NGRDIVKAALQHAGLL"
+ misc_feature 395244..396098
+ /locus_tag="SARI_00393"
+ /note="Dihydrodipicolinate synthase (DHDPS); Region:
+ DHDPS; cd00950"
+ /db_xref="CDD:188637"
+ misc_feature 395250..396107
+ /locus_tag="SARI_00393"
+ /note="dihydrodipicolinate synthase; Region: dapA;
+ TIGR00674"
+ /db_xref="CDD:129757"
+ misc_feature order(395367..395381,395478..395480,395484..395486,
+ 395553..395561,395646..395648,395652..395654,
+ 395982..395987,396042..396044,396048..396050)
+ /locus_tag="SARI_00393"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:188637"
+ misc_feature order(395370..395375,395637..395639,395652..395654,
+ 395721..395723,395796..395798,395802..395804)
+ /locus_tag="SARI_00393"
+ /note="active site"
+ /db_xref="CDD:188637"
+ misc_feature 395721..395723
+ /locus_tag="SARI_00393"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:188637"
+ gene 396136..397170
+ /locus_tag="SARI_00394"
+ CDS 396136..397170
+ /locus_tag="SARI_00394"
+ /inference="protein motif:HMMPfam:IPR010653"
+ /inference="protein motif:ScanRegExp:IPR001360"
+ /inference="similar to AA sequence:REFSEQ:NP_461423.1"
+ /note="'COG: COG3317 Uncharacterized lipoprotein;
+ Psort location: golgi, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="lipoprotein"
+ /protein_id="YP_001569473.1"
+ /db_xref="GI:161502361"
+ /db_xref="InterPro:IPR001360"
+ /db_xref="InterPro:IPR010653"
+ /translation="MAYSVQKSRLAKVAGVSLVLLLAACSSDSRYKRQVSGDESYLDA
+ APLAELHAPAGMILPITTGDYVIPVTKGSGAVGKALDIRPPAQPLALVSGARTQFSGD
+ TATLLVENGRSSTLWPQVVSVIQAKNYPIEKRDDASQTLMTDWVNWNRLDEDEQYRGR
+ YQISVKPQGYQQAVTVKLVNLEQAGKPVADAASLQRYSTEMMNVISAGLDKTATDAAN
+ AAQSRSAATMDVQSAADDTGLPMLVVRGPFNVVWQRLPAALEKAGMKVTDSTRSQGSM
+ AVTYKPLSDSDWRELGASDPGLPSGDYKLQVGDLDNRSSLQFIDPKGHTLTQSQNDAL
+ VAVFQAAFNK"
+ misc_feature 396136..397167
+ /locus_tag="SARI_00394"
+ /note="lipoprotein; Provisional; Region: PRK11679"
+ /db_xref="CDD:236955"
+ misc_feature 396253..397161
+ /locus_tag="SARI_00394"
+ /note="NlpB/DapX lipoprotein; Region: Lipoprotein_18;
+ pfam06804"
+ /db_xref="CDD:219182"
+ gene 397356..398069
+ /locus_tag="SARI_00395"
+ CDS 397356..398069
+ /locus_tag="SARI_00395"
+ /inference="protein motif:BlastProDom:IPR001636"
+ /inference="protein motif:Gene3D:IPR013816"
+ /inference="protein motif:HMMPanther:IPR001636"
+ /inference="protein motif:HMMPfam:IPR001636"
+ /inference="protein motif:HMMTigr:IPR001636"
+ /inference="protein motif:ScanRegExp:IPR001636"
+ /inference="similar to AA sequence:INSD:AAV76394.1"
+ /note="catalyzes the formation of
+ (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-
+ carboxamido)succinate from
+ 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and
+ L-aspartate in purine biosynthesis; SAICAR synthase"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphoribosylaminoimidazole-succinocarboxamide
+ synthase"
+ /protein_id="YP_001569474.1"
+ /db_xref="GI:161502362"
+ /db_xref="InterPro:IPR001636"
+ /db_xref="InterPro:IPR013816"
+ /translation="MQKQAELYRGKAKTVYSTENPDLLVLEFRNDTSAGDGARIEKFD
+ RKGMVNNKFNHFIMTKLAEAGIPTQMERLLSDTECLVKKLEMVPVECVVRNRAAGSLV
+ KRLGVEEGMELNPPIFDLFLKNDALHDPMVNSSYCETFGWVSQENLARMKALTYKAND
+ VLKKLFDDAGLILVDFKLEFGLYKGEVVLGDEFSPDGSRLWDKETLDKMDKDRFRQSL
+ GGLIEAYEAVARRLGVKLD"
+ misc_feature 397356..398066
+ /locus_tag="SARI_00395"
+ /note="phosphoribosylaminoimidazole-succinocarboxamide
+ synthase; Reviewed; Region: PRK09362"
+ /db_xref="CDD:181800"
+ misc_feature 397374..398054
+ /locus_tag="SARI_00395"
+ /note="bacterial and archaeal
+ 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide
+ (SAICAR) synthase; Region: SAICAR_synt_PurC; cd01415"
+ /db_xref="CDD:133470"
+ misc_feature order(397374..397379,397383..397388,397392..397394,
+ 397398..397403,397425..397427,397431..397433,
+ 397560..397562,397599..397601,397605..397607,
+ 397611..397613,397722..397724,397890..397892,
+ 397923..397928)
+ /locus_tag="SARI_00395"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:133470"
+ misc_feature order(397377..397379,397383..397394,397398..397400,
+ 397425..397427,397461..397463,397563..397565,
+ 397596..397607,397611..397613,397623..397625,
+ 397629..397631,397635..397637,397647..397655,
+ 397716..397718,397722..397724,397740..397742,
+ 397878..397886,397890..397892,397926..397928,
+ 397941..397952)
+ /locus_tag="SARI_00395"
+ /note="active site"
+ /db_xref="CDD:133470"
+ misc_feature order(397461..397463,397623..397625,397629..397631,
+ 397635..397637,397647..397655,397716..397718,
+ 397740..397742,397878..397886,397941..397952)
+ /locus_tag="SARI_00395"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:133470"
+ gene 398269..399063
+ /locus_tag="SARI_00396"
+ CDS 398269..399063
+ /locus_tag="SARI_00396"
+ /inference="protein motif:HMMPfam:IPR007343"
+ /inference="protein motif:ScanRegExp:IPR006025"
+ /inference="similar to AA sequence:INSD:AAV76395.1"
+ /note="'KEGG: eci:UTI89_C2802 1.4e-134 ypfJ; hypothetical
+ protein;
+ COG: COG2321 Predicted metalloprotease;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569475.1"
+ /db_xref="GI:161502363"
+ /db_xref="InterPro:IPR006025"
+ /db_xref="InterPro:IPR007343"
+ /translation="MGGPGFRLPRGKGGIILLVVVLVAGYYGVDLTSLLTGQPVSQQQ
+ STRSISPNDDEAAKFTSVILATTEDTWGQLFQKMGRGYQQPKLVMYRGMTRTGCGAGQ
+ SVMGPFYCPADGTVYIDLSFYDDMKNKLGADGDFAQGYVIAHEVGHHVQKLLGIEPKV
+ RQLQQNASQTEVNRLSVRMELQADCFAGVWGHSMQQQGVLEAGDLEEALNAAQAIGDD
+ RLQQQGQGRVVPDSFTHGTSEQRYSWFKRGFDSGDPAQCNTFGKNF"
+ misc_feature 398269..399060
+ /locus_tag="SARI_00396"
+ /note="Predicted metalloprotease [General function
+ prediction only]; Region: COG2321"
+ /db_xref="CDD:225203"
+ misc_feature 398272..399048
+ /locus_tag="SARI_00396"
+ /note="Putative neutral zinc metallopeptidase; Region:
+ Zn_peptidase; pfam04228"
+ /db_xref="CDD:217975"
+ gene 399079..401097
+ /locus_tag="SARI_00397"
+ CDS 399079..401097
+ /locus_tag="SARI_00397"
+ /inference="protein motif:HMMPfam:IPR000182"
+ /inference="protein motif:HMMPfam:IPR007807"
+ /note="'COG: COG1444 Predicted P-loop ATPase fused to an
+ acetyltransferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569476.1"
+ /db_xref="GI:161502364"
+ /db_xref="InterPro:IPR000182"
+ /db_xref="InterPro:IPR007807"
+ /translation="MSDIDALQALTSQMIQEGIRRLLVISGDAAWCRERAEAMRAALP
+ GDWLWVAPDAPAEPRCTPQALQMLLGREFRHAIFDAWQGFDAAAFAALSGTLQAGSWL
+ LLLMPPYEAWECRPDTDSLRWSDCAQPIPTPQFAQHLKRTLSRDPQTLLWRQNLPFCW
+ PSYPARERWRPATGEPQPDQAAILSRLLEMPPGVATVIAARGRGKSALAGQFISQMTG
+ TAIVTAPAKSATDILATFAGGRFCFIAPDALLASEARADWLVVDEAAAIPAPLLLQLV
+ SRFPRTLLTTTVQGYEGTGRGFLLKFCARFPQLHRFTLRQPVRWAPECPLENIVSEAL
+ IFDDEAFAQAPHGAIAISAFYQQAWGETPALPRAVYQLLSGAHYRTSPLDLRRMMDAP
+ GQHFLQATANNRVAGALWLVEEGGLSAELSQAVWCGFRRPRGNLVAQSLAAHGSDPLA
+ ATLVGRRVSRIAVHPARQREGIGQQLIACACVQAAQCDYLSVSFGYTPELWRFWQRCG
+ FVLVRMGNHREASSGCYTAMALLPLSDAGKRLAQQEHRRLRRDADILTQWNGEAIPLA
+ ALREQALDDEDWRELVGFAFAHRPLLTSLGCLHRLLQYSALPLPALRGRLEEKASDAE
+ LCARLHVSGRKALLALQRAQAAQAVIALDAGRTQRLRDVMPGGENHAG"
+ misc_feature 399079..400983
+ /locus_tag="SARI_00397"
+ /note="Predicted P-loop ATPase fused to an
+ acetyltransferase [General function prediction only];
+ Region: COG1444"
+ /db_xref="CDD:224361"
+ misc_feature 399700..400086
+ /locus_tag="SARI_00397"
+ /note="Helicase; Region: Helicase_RecD; pfam05127"
+ /db_xref="CDD:218449"
+ misc_feature 400183..400680
+ /locus_tag="SARI_00397"
+ /note="GNAT acetyltransferase 2; Region: GNAT_acetyltr_2;
+ pfam13718"
+ /db_xref="CDD:222340"
+ misc_feature 400720..400983
+ /locus_tag="SARI_00397"
+ /note="Possible tRNA binding domain; Region: tRNA_bind_2;
+ pfam13725"
+ /db_xref="CDD:222344"
+ gene complement(401124..401324)
+ /locus_tag="SARI_00398"
+ CDS complement(401124..401324)
+ /locus_tag="SARI_00398"
+ /inference="similar to AA sequence:SwissProt:Q8XF02"
+ /note="'COG: NOG13899 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569477.1"
+ /db_xref="GI:161502365"
+ /translation="MDWLAKYWWILVLVFLVGVLLNVIKDLKRIDHKKFLANKPELPP
+ HRDFNDKWDDEDDWPKKDQSKK"
+ misc_feature complement(<401178..401324)
+ /locus_tag="SARI_00398"
+ /note="hypothetical protein; Provisional; Region:
+ PRK13664"
+ /db_xref="CDD:184221"
+ gene complement(401352..402479)
+ /locus_tag="SARI_00399"
+ CDS complement(401352..402479)
+ /locus_tag="SARI_00399"
+ /inference="protein motif:HMMPfam:IPR002933"
+ /inference="protein motif:HMMPfam:IPR011650"
+ /inference="protein motif:HMMTigr:IPR005941"
+ /inference="protein motif:ScanRegExp:IPR001261"
+ /inference="similar to AA sequence:REFSEQ:NP_461418.1"
+ /note="'dapE-encoded N-succinyl-L,L-diaminopimelic acid
+ desuccinylase (DapE), catalyzes the hydrolysis of
+ N-succinyl-L,Ldiaminopimelate L,L-SDAP to
+ L,L-diaminopimelate and succinate. It is a metalloprotease
+ containing dinuclear active sites. Its structure is
+ similar to the carboxypeptidase G2 from Pseudomonas sp.
+ strain RS-16 and the aminopeptidase from Aeromonas
+ proteolytica.'"
+ /codon_start=1
+ /transl_table=11
+ /product="succinyl-diaminopimelate desuccinylase"
+ /protein_id="YP_001569478.1"
+ /db_xref="GI:161502366"
+ /db_xref="InterPro:IPR001261"
+ /db_xref="InterPro:IPR002933"
+ /db_xref="InterPro:IPR005941"
+ /db_xref="InterPro:IPR011650"
+ /translation="MSCPVIELTQQLIRRPSLSPDDAGCQALMIERLRKIGFTIEHMD
+ FGDTQNFWAWRGRGETLAFAGHTDVVPAGDVDRWINPPFEPTIRDGMLFGRGAADMKG
+ SLAAMVVAAERFVAQHPHHRGRLAFLITSDEEASAKNGTVKVVEALMARNERLDYCLV
+ GEPSSTEIVGDVVKNGRRGSLTCNLTIHGVQGHVAYPHLADNPVHRAAPFLNELVAIE
+ WDRGNDFFPATSMQVANIQAGTGSNNVIPGELFVQFNFRFSTELTDEMIKERVHALLE
+ KHQLRYTVDWWLSGQPFLTARGKLVDAVVNAIEHYNEIKPQLLTTGGTSDGRFIARMG
+ AQVVELGPVNATIHKINECVNAADLQLLARMYQRIMEQLVA"
+ misc_feature complement(401355..402476)
+ /locus_tag="SARI_00399"
+ /note="succinyl-diaminopimelate desuccinylase; Reviewed;
+ Region: PRK13009"
+ /db_xref="CDD:237265"
+ misc_feature complement(401370..402464)
+ /locus_tag="SARI_00399"
+ /note="M20 Peptidase proteobacterial DapE encoded
+ N-succinyl-L,L-diaminopimelic acid desuccinylase; Region:
+ M20_DapE_proteobac; cd03891"
+ /db_xref="CDD:193511"
+ misc_feature complement(order(401436..401438,401994..401996,
+ 402078..402083,402183..402185,402282..402284))
+ /locus_tag="SARI_00399"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:193511"
+ misc_feature complement(order(401514..401516,401709..401711,
+ 401715..401717,401739..401744,401763..401786,
+ 401790..401792,401835..401837,401844..401849,
+ 401853..401858,401865..401870,401874..401876,
+ 401892..401903,401934..401936))
+ /locus_tag="SARI_00399"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:193511"
+ gene complement(402483..402839)
+ /locus_tag="SARI_00400"
+ CDS complement(402483..402839)
+ /locus_tag="SARI_00400"
+ /inference="protein motif:Gene3D:IPR012335"
+ /inference="protein motif:HMMPfam:IPR006660"
+ /inference="protein motif:HMMTigr:IPR006504"
+ /inference="protein motif:superfamily:IPR012336"
+ /inference="similar to AA sequence:INSD:CAD02682.1"
+ /note="'KEGG: eci:UTI89_C2797 7.4e-49 yffB; conserved
+ THIoredoxin-like protein;
+ COG: COG1393 Arsenate reductase and related proteins,
+ glutaredoxin family;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569479.1"
+ /db_xref="GI:161502367"
+ /db_xref="InterPro:IPR006504"
+ /db_xref="InterPro:IPR006660"
+ /db_xref="InterPro:IPR012335"
+ /db_xref="InterPro:IPR012336"
+ /translation="MITLYGIKNCDTIKKARRWLEEHGIDYRFHDYRVDGIDLSLINT
+ FIAELGWQPLLNTRGTTWRKLDEGDRSGITDADSAAALMVEQPAIIKRPLLCAPGKPM
+ LLGFSESRYQQFFDEV"
+ misc_feature complement(402516..402836)
+ /locus_tag="SARI_00400"
+ /note="Arsenate Reductase (ArsC) family, Yffb subfamily;
+ Yffb is an uncharacterized bacterial protein encoded by
+ the yffb gene, related to the thioredoxin-fold arsenic
+ reductases, ArsC. The structure of Yffb and the
+ conservation of the catalytic cysteine...; Region:
+ ArsC_Yffb; cd03035"
+ /db_xref="CDD:239333"
+ misc_feature complement(402498..402827)
+ /locus_tag="SARI_00400"
+ /note="ArsC family; Region: ArsC; pfam03960"
+ /db_xref="CDD:202832"
+ misc_feature complement(order(402522..402524,402564..402566,
+ 402672..402674,402810..402812))
+ /locus_tag="SARI_00400"
+ /note="putative catalytic residues [active]"
+ /db_xref="CDD:239333"
+ gene complement(403413..406526)
+ /locus_tag="SARI_00401"
+ CDS complement(403413..406526)
+ /locus_tag="SARI_00401"
+ /inference="protein motif:FPrintScan:IPR001036"
+ /inference="protein motif:HMMPfam:IPR001036"
+ /inference="protein motif:HMMTigr:IPR004764"
+ /note="'KEGG: eci:UTI89_C2351 3.6e-111 yegO; hypothetical
+ protein YegO K07789;
+ COG: COG0841 Cation/multidrug efflux pump;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="aminoglycoside/multidrug efflux system"
+ /protein_id="YP_001569480.1"
+ /db_xref="GI:161502368"
+ /db_xref="InterPro:IPR001036"
+ /db_xref="InterPro:IPR004764"
+ /translation="MANFFIDRPIFAWVLAILLCLTGALAIFSLPVEQYPDLAPPNVR
+ ITANYPGASAQTLENTVTQVIEQNMTGLDNLMYMSSQSSGTGQATITLSFIAGTDPDE
+ AVQQVQNQLQSAMRKLPQAVQDQGVTVRKTGDTNILTIAFVSTDGSMDKQDIADYVAS
+ NIQDPLSRVNGVGDIDAYGSQYSMRIWLDPAKLNSFQMTAKDVTDAIASQNAQIAVGQ
+ LGGTPSVDKQALNATINAQSLLQTPQQFRDITLRVNQDGSEVQLGDVATVEMGAEKYD
+ HLSRFNGNPASGLGVKLASGANEMATAKLVLDRLNELAQYFPHGLEYKIAYETTSFVK
+ ASIIDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMGTFSVLYAFGYSINT
+ LTMFAMVLAIGLLVDDAIVVVENVERIMSEEGLTPREATRKSMGQIQGALVGIAMVLS
+ AVFVPMAFFGGTTGAIYRQFSITIVSAMVLSVLVAMILTPALCATLLKPLRKGEQHGQ
+ TGFFGWFNRTFNRNAERYEKSVAKILHRSLRWILIYVLLLGGMVFLFLRLPTSFLPQE
+ DRGMFTTSIQLPSGSTQQQTLKVVEKVENYYFTHEKDNIMSVFSTVGSGPGGNGQNVA
+ RMFVRLKDWDARDPTTGTSFAIIERATKAFSQIKEARIFASSPPAISGLGSSAGFDME
+ LQDHAGAGHDALMAARDQLIELAGKNSSLTRVRHNGLDDSPQLQIDIDQRKAQALGVS
+ IDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQAAAKYRMLPDDINLWYVRNKDGGMVP
+ FSAFATSRWETGSPRLERYNGYSAVEIVGEAAPGVSTGTAMDTMESLVHQLPGGFGLE
+ WTAMSYQERLSGAQAPALYAISLLVVFLCLAALYESWSVPFSVMLVVPLGVIGALLAT
+ WMRGLENDVYFQVGLLTVIGLSAKNAILIVEFANEMNQKGHSLLDATLHASRQRLRPI
+ LMTSLAFIFGVLPMATSNGAGSGSQHAVGTGVMGGMISATILAIFFVPLFFVLIRRRF
+ PLKPRPE"
+ misc_feature complement(403416..406526)
+ /locus_tag="SARI_00401"
+ /note="aminoglycoside/multidrug efflux system;
+ Provisional; Region: PRK10555"
+ /db_xref="CDD:182544"
+ misc_feature complement(405072..>405536)
+ /locus_tag="SARI_00401"
+ /note="Protein export membrane protein; Region: SecD_SecF;
+ cl14618"
+ /db_xref="CDD:246677"
+ gene complement(406716..408413)
+ /locus_tag="SARI_00402"
+ CDS complement(406716..408413)
+ /locus_tag="SARI_00402"
+ /inference="protein motif:Gene3D:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003660"
+ /inference="protein motif:HMMPfam:IPR011712"
+ /inference="protein motif:HMMSmart:IPR003594"
+ /inference="protein motif:HMMSmart:IPR003660"
+ /inference="protein motif:superfamily:IPR003594"
+ /inference="similar to AA sequence:INSD:AAL21374.1"
+ /note="'KEGG: stm:STM2480 2.8e-285 narQ; sensory histidine
+ kinase in two-component regulatory system with NarP (
+ NarL) K07674;
+ COG: COG3850 Signal transduction histidine kinase,
+ nitrate/nitrite-specific;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="nitrate/nitrite sensor protein NarQ"
+ /protein_id="YP_001569481.1"
+ /db_xref="GI:161502369"
+ /db_xref="InterPro:IPR003594"
+ /db_xref="InterPro:IPR003660"
+ /db_xref="InterPro:IPR011712"
+ /translation="MTVKRPVSASLAKAFFYIVLLSILSTGSALLTLTSSLRDAEAIN
+ IAGSLRMQSYRLGYDLQSRSPQINAHRQLFQHALNSPVLRNLNAWYVPQAVKNRYARL
+ HANWLEMNSRLQGGDIAWYQTNINNYVDQIDLFVLALQHYAERKVMLVVAISLAGGIG
+ IFTLVFFTLRRIRQQVVRPLNQLVTASQRIEHGQFAPLPLDTSLSNELGLLAKTFSQM
+ SSELHKLYRSLEASVEEKTRDLHEAHRRLEVLYQCSQALNTSQIDVHCFRHILRIVRE
+ HDAAWYLKLTVGDNWRISEGTQRPNLPVQILPVTMQDTVYGELHWQSPNVDASTPLLN
+ SVSTMLGRGLYFNQAQKHFQQLLLMEERATIARELHDSLAQVLSYLRIQLTLLKRAIP
+ EDNACAQSIMTDFSRALNDAYRQLRELLTTFRLTLQQADLPSALHEMLEDLQSQTPAK
+ LTLDCRLPTLALDAQMQVHLLQIVREAVLNAIKHANATEIAVSCVTAPDGDHTVYIHD
+ NGIGIGEPHEPVGHYGLNIMRERAERLGGTLNFSQPSGGGTLVSISFRSSSGEDIAS"
+ misc_feature complement(406725..408413)
+ /locus_tag="SARI_00402"
+ /note="nitrate/nitrite sensor protein NarQ; Provisional;
+ Region: PRK10935"
+ /db_xref="CDD:236800"
+ misc_feature complement(408015..408302)
+ /locus_tag="SARI_00402"
+ /note="Type IV pili methyl-accepting chemotaxis transducer
+ N-term; Region: PilJ; pfam13675"
+ /db_xref="CDD:222310"
+ misc_feature complement(407742..407888)
+ /locus_tag="SARI_00402"
+ /note="Histidine kinase, Adenylyl cyclase,
+ Methyl-accepting protein, and Phosphatase (HAMP) domain.
+ HAMP is a signaling domain which occurs in a wide variety
+ of signaling proteins, many of which are bacterial. The
+ HAMP domain consists of two alpha helices...; Region:
+ HAMP; cd06225"
+ /db_xref="CDD:100122"
+ misc_feature complement(order(407748..407753,407760..407765,
+ 407769..407774,407781..407786,407790..407795,
+ 407844..407846,407850..407855,407862..407867,
+ 407871..407876,407883..407888))
+ /locus_tag="SARI_00402"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:100122"
+ misc_feature complement(407175..407333)
+ /locus_tag="SARI_00402"
+ /note="Histidine kinase; Region: HisKA_3; pfam07730"
+ /db_xref="CDD:219540"
+ misc_feature complement(406749..407006)
+ /locus_tag="SARI_00402"
+ /note="Histidine kinase-like ATPases; This family includes
+ several ATP-binding proteins for example: histidine
+ kinase, DNA gyrase B, topoisomerases, heat shock protein
+ HSP90, phytochrome-like ATPases and DNA mismatch repair
+ proteins; Region: HATPase_c; cd00075"
+ /db_xref="CDD:238030"
+ misc_feature complement(order(406761..406763,406767..406772,
+ 406785..406787,406791..406793,406839..406847,
+ 406875..406880,406884..406886,406890..406892,
+ 406896..406898,406965..406967,406974..406976,
+ 406986..406988))
+ /locus_tag="SARI_00402"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature complement(406974..406976)
+ /locus_tag="SARI_00402"
+ /note="Mg2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature complement(order(406842..406844,406878..406880,
+ 406884..406886))
+ /locus_tag="SARI_00402"
+ /note="G-X-G motif; other site"
+ /db_xref="CDD:238030"
+ gene complement(408574..408822)
+ /locus_tag="SARI_00403"
+ CDS complement(408574..408822)
+ /locus_tag="SARI_00403"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569482.1"
+ /db_xref="GI:161502370"
+ /translation="MSDRAVRTATGAGRILAMMTCYRAALMLMFDDSNSGLIALWRQY
+ MSLIIVSHYTGDLAGMAPQALLAIGHNKTIHGVLLFWL"
+ gene 408598..410559
+ /locus_tag="SARI_00404"
+ CDS 408598..410559
+ /locus_tag="SARI_00404"
+ /inference="protein motif:BlastProDom:IPR001327"
+ /inference="protein motif:FPrintScan:IPR000759"
+ /inference="protein motif:FPrintScan:IPR001100"
+ /inference="protein motif:FPrintScan:IPR013027"
+ /inference="protein motif:HMMPfam:IPR001327"
+ /inference="protein motif:HMMPfam:IPR013027"
+ /inference="protein motif:HMMTigr:IPR006006"
+ /inference="protein motif:superfamily:IPR009051"
+ /inference="similar to AA sequence:INSD:AAL21373.1"
+ /note="'unknown function; in E. coli the aegA gene is
+ regulated by Fnr, NarXL, and NarQ (but not ArcA), induced
+ under anaerobic conditions and repressed in the presence
+ of nitrate (anaerobic)'"
+ /codon_start=1
+ /transl_table=11
+ /product="oxidoreductase Fe-S binding subunit"
+ /protein_id="YP_001569483.2"
+ /db_xref="GI:448236194"
+ /db_xref="InterPro:IPR000759"
+ /db_xref="InterPro:IPR001100"
+ /db_xref="InterPro:IPR001327"
+ /db_xref="InterPro:IPR006006"
+ /db_xref="InterPro:IPR009051"
+ /db_xref="InterPro:IPR013027"
+ /translation="MNRFIMANSQQCLGCHACEVACVMAHNDERHVLTPQRYQPRITV
+ IKHQHQRSAVTCHHCEDAPCARSCPNGAIAHINDSVQVNAQKCIGCKSCVVACPFGTM
+ QMILTPVASNQFKASAHKCDLCQGRENGPACVENCPADALQLITEASLTRLAKTRRLR
+ TARQEIRPWHTVDTERSGATRSKVERMQATPPRGEPDKLAIEARKTTFEEIYLPFRTV
+ QAEREAARCLTCGEHSICEWTCPLHNHIPQWIELVKAGDIDAAVALSHQTNCLPEITG
+ RVCPQDRLCEGACTLRDEYGAVTIGNIERYISDRALSKGWRPDLSDVQKIDKRVAIIG
+ AGPAGLACADVLARNGVSATVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGI
+ RFELNCEVGKDISLATLLETYDAVFVGVGTYRSMKAGLPNEDAPGVYDALPFLIANTK
+ QVMGLSESPDAPFIDTADLNVVVLGGGDTAMDCVRTALRHGAAKVTCAYRRDEANMPG
+ SKKEVKNAREEGANFEFNVQPVELVLDTQGRVSGIRFLRTQLGEPDGQGRRRPVPVPG
+ SEFVMPADAVIMAFGFHPHGMPWLESHGVKVDDWGRIAASVESAFRYQTSNPKIFAGG
+ DAVRGADLVATAMAEGRHAAQGMLDWFGK"
+ misc_feature 408598..410556
+ /locus_tag="SARI_00404"
+ /note="putative oxidoreductase Fe-S binding subunit;
+ Reviewed; Region: PRK12769"
+ /db_xref="CDD:183733"
+ misc_feature 408835..408897
+ /locus_tag="SARI_00404"
+ /note="4Fe-4S binding domain; Region: Fer4; pfam00037"
+ /db_xref="CDD:215671"
+ misc_feature 409591..>409725
+ /locus_tag="SARI_00404"
+ /note="NAD(P)-binding Rossmann-like domain; Region:
+ NAD_binding_8; pfam13450"
+ /db_xref="CDD:205628"
+ misc_feature 410005..410217
+ /locus_tag="SARI_00404"
+ /note="Pyridine nucleotide-disulphide oxidoreductase;
+ Region: Pyr_redox; pfam00070"
+ /db_xref="CDD:215691"
+ gene complement(410933..411357)
+ /locus_tag="SARI_00405"
+ /note="Pseudogene compared to gi|16765798|ref|NP_461413.1|
+ hypothetical protein STM2478 [Salmonella typhimurium LT2]"
+ gene 411411..412013
+ /locus_tag="SARI_00406"
+ CDS 411411..412013
+ /locus_tag="SARI_00406"
+ /inference="protein motif:Gene3D:IPR000086"
+ /inference="protein motif:HMMPfam:IPR000086"
+ /inference="protein motif:HMMTigr:IPR004385"
+ /inference="protein motif:superfamily:IPR000086"
+ /inference="similar to AA sequence:REFSEQ:NP_457011.1"
+ /note="'KEGG: eci:UTI89_C2793 7.2e-90 yffH; hypothetical
+ protein YffH K01515;
+ COG: COG0494 NTP pyrophosphohydrolases including oxidative
+ damage repair enzymes;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569484.1"
+ /db_xref="GI:161502372"
+ /db_xref="InterPro:IPR000086"
+ /db_xref="InterPro:IPR004385"
+ /translation="MFLLHPGASMSQNITLIKDKILSDNYFTLRNITYDLTRRNGKVI
+ RHKREVYDRGNGATILLYNSTKKTVVLVRQFRVATWVNGNEDGMLIETCAGLLDNDEP
+ EVCIRKEAIEETGYDVGEVRKIFELYMSPGGVTELIHFFIAEYRDSERASTGGGVEDE
+ DIEVLELPFSRALEMARSGEIRDGKTVLLLNYLHMSHLMG"
+ misc_feature 411438..412007
+ /locus_tag="SARI_00406"
+ /note="GDP-mannose pyrophosphatase NudK; Provisional;
+ Region: PRK15009"
+ /db_xref="CDD:184971"
+ misc_feature 411567..412001
+ /locus_tag="SARI_00406"
+ /note="ADP-ribose pyrophosphatase (ADPRase) catalyzes the
+ hydrolysis of ADP-ribose and a variety of additional
+ ADP-sugar conjugates to AMP and ribose-5-phosphate. Like
+ other members of the Nudix hydrolase superfamily, it
+ requires a divalent cation, such as Mg2+; Region:
+ ADPRase_NUDT5; cd03424"
+ /db_xref="CDD:239516"
+ misc_feature order(411567..411569,411573..411575,411627..411629,
+ 411633..411635,411639..411641,411672..411674,
+ 411786..411797,411801..411803,411807..411821,
+ 411888..411893,411897..411899,411936..411941,
+ 411963..411965,411975..411977,411984..411986,
+ 411996..412001)
+ /locus_tag="SARI_00406"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:239516"
+ misc_feature order(411576..411578,411636..411638,411696..411698,
+ 411735..411737,411747..411749,411816..411818)
+ /locus_tag="SARI_00406"
+ /note="ADP-ribose binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:239516"
+ misc_feature order(411636..411638,411690..411698,411735..411737,
+ 411747..411749,411816..411818,411888..411890)
+ /locus_tag="SARI_00406"
+ /note="active site"
+ /db_xref="CDD:239516"
+ misc_feature order(411693..411704,411708..411713,411714..411758)
+ /locus_tag="SARI_00406"
+ /note="nudix motif; other site"
+ /db_xref="CDD:239516"
+ misc_feature order(411735..411737,411747..411749,411888..411890)
+ /locus_tag="SARI_00406"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:239516"
+ gene 412138..413181
+ /locus_tag="SARI_00407"
+ CDS 412138..413181
+ /locus_tag="SARI_00407"
+ /inference="protein motif:HMMPfam:IPR009560"
+ /inference="similar to AA sequence:INSD:AAL21370.1"
+ /note="'COG: NOG06758 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569485.1"
+ /db_xref="GI:161502373"
+ /db_xref="InterPro:IPR009560"
+ /translation="MRYRVILFCLLGLLPVQLLWAAPAQRTFSDWQVTCNNQHFCVAR
+ NTGEHHGLVMTLSRSAGARTDAVLRIDRGGLAPPDAKEAAIAPRLLLDGKPLSFNTPH
+ WRVSPWHLMTDDPATIIAFLQTIQDAQAITLKNGVQTLSLAGLKAALLFIDAQQKRVG
+ SETAWVEKGNEPPLSVPPAPALKGIAIINPTPVPLSEEERNDLLDYAAWRVNGIRCSL
+ DPLRREVQVSALTDNKALLIVNCEAGAYNTIDLAWIVSRKKTLVSRAVRLRLPFNRGV
+ ESKDMELMNAFFDEKTHELVTLAKGRGLTDCGIQTRWRYDGDRFRLVRYAEEPSCDNW
+ HGPDAWPTLWITR"
+ misc_feature 412177..413178
+ /locus_tag="SARI_00407"
+ /note="Protein of unknown function (DUF1176); Region:
+ DUF1176; pfam06674"
+ /db_xref="CDD:219130"
+ gene 413310..413540
+ /locus_tag="SARI_00408"
+ CDS 413310..413540
+ /locus_tag="SARI_00408"
+ /inference="similar to AA sequence:INSD:AAL21369.1"
+ /note="'COG: NOG31287 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569486.1"
+ /db_xref="GI:161502374"
+ /translation="MKINNGPVLCPHCGCLSAYYEIDRLAAIREKVNKEGGSKAWDST
+ LQAHKKKAFCLMCHKSIDEAVIGQSDAPESAR"
+ gene complement(413603..415603)
+ /locus_tag="SARI_00409"
+ CDS complement(413603..415603)
+ /locus_tag="SARI_00409"
+ /inference="protein motif:Gene3D:IPR009014"
+ /inference="protein motif:HMMPanther:IPR005478"
+ /inference="protein motif:HMMPfam:IPR005474"
+ /inference="protein motif:HMMPfam:IPR005475"
+ /inference="protein motif:HMMPfam:IPR005476"
+ /inference="protein motif:HMMPIR:IPR005478"
+ /inference="protein motif:HMMTigr:IPR005478"
+ /inference="protein motif:ScanRegExp:IPR005474"
+ /inference="protein motif:ScanRegExp:IPR005475"
+ /inference="protein motif:superfamily:IPR009014"
+ /note="'catalyzes the formation of ribose 5-phosphate and
+ xylulose 5-phosphate from sedoheptulose 7-phosphate and
+ glyceraldehyde 3-phosphate; can transfer ketol groups
+ between several groups; in Escherichia coli there are two
+ tkt genes, tktA expressed during exponential growth and
+ the tktB during stationary phase'"
+ /codon_start=1
+ /transl_table=11
+ /product="transketolase"
+ /protein_id="YP_001569487.1"
+ /db_xref="GI:161502375"
+ /db_xref="InterPro:IPR005474"
+ /db_xref="InterPro:IPR005475"
+ /db_xref="InterPro:IPR005476"
+ /db_xref="InterPro:IPR005478"
+ /db_xref="InterPro:IPR009014"
+ /translation="MSRKDLANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFL
+ KHNPTDPAWYDRDRFILSNGHASMLLYSLLHLTGYDLPLEELKNFRQLHSKTPGHPEI
+ GYTPGVETTTGPLGQGLANAVGLAIAERTLGAQFNQPDHEIVDHYTYVFMGDGCLMEG
+ ISHEVCSLAGTLGLGKLIGFYDHNGISIDGETEGWFTDDTAKRFEAYHWHVVHDIDGH
+ DPEAVKKAILEARSVKDKPSLIICRTVIGFGSPNKAGKEESHGAALGEEEVALTRQKL
+ GWHHPAFEIPKEIYRAWDGREKGEKAQQRWQEKFAAYEKAYPELAAEFTRRMSGGLPE
+ AWESATQKFINDLQANPAKIATRKASQNTLNAYGPLLPELLGGSADLAPSNLTIWKGS
+ TSLKEDPAGNYIHYGVREFGMTAIANGIAHHGGFVPYTATFLMFVEYARNAARMAALM
+ KARQIMVYTHDSIGLGEDGPTHQAVEQLASLRLTPNFSTWRPCDQVEAAVGWKLAIER
+ HHGPTALILSRQNLAQVERTPEQVKAIARGGYILKDSGGKPDIILIATGSEMEITLQA
+ AEKLTGEGHNVRVVSLPSTDIFDAQEEAYRESVLPSHVTARVAVEAGIADYWYKYVGL
+ KGAIIGMTGYGESAPADKLFPYFGFTVENIVEKARRVLSMKG"
+ misc_feature complement(413618..415603)
+ /locus_tag="SARI_00409"
+ /note="transketolase; Reviewed; Region: PRK12753"
+ /db_xref="CDD:183723"
+ misc_feature complement(414785..415582)
+ /locus_tag="SARI_00409"
+ /note="Thiamine pyrophosphate (TPP) family, Transketolase
+ (TK) subfamily, TPP-binding module; TK catalyzes the
+ transfer of a two-carbon unit from ketose phosphates to
+ aldose phosphates. In heterotrophic organisms, TK provides
+ a link between glycolysis and the...; Region: TPP_TK;
+ cd02012"
+ /db_xref="CDD:238970"
+ misc_feature complement(order(414824..414826,415040..415042,
+ 415046..415048,415052..415054,415127..415129,
+ 415139..415144,415259..415261,415265..415267,
+ 415409..415411))
+ /locus_tag="SARI_00409"
+ /note="TPP-binding site [chemical binding]; other site"
+ /db_xref="CDD:238970"
+ misc_feature complement(order(414995..414997,415040..415045,
+ 415091..415093,415103..415105,415112..415117,
+ 415124..415135,415253..415255,415259..415264,
+ 415301..415303,415307..415312,415334..415336))
+ /locus_tag="SARI_00409"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238970"
+ misc_feature complement(414047..414532)
+ /locus_tag="SARI_00409"
+ /note="Pyrimidine (PYR) binding domain of
+ 1-deoxy-D-xylulose-5-phosphate synthase (DXS),
+ transketolase (TK), and related proteins; Region:
+ TPP_PYR_DXS_TK_like; cd07033"
+ /db_xref="CDD:132916"
+ misc_feature complement(order(414074..414076,414140..414145,
+ 414191..414193,414200..414202,414275..414280,
+ 414287..414289,414344..414352,414356..414361,
+ 414368..414385,414389..414391,414398..414400,
+ 414464..414466,414482..414484,414488..414490))
+ /locus_tag="SARI_00409"
+ /note="PYR/PP interface [polypeptide binding]; other site"
+ /db_xref="CDD:132916"
+ misc_feature complement(order(414149..414151,414155..414160,
+ 414164..414169,414194..414196,414200..414202,
+ 414281..414283,414287..414292,414374..414382,
+ 414389..414391,414464..414466))
+ /locus_tag="SARI_00409"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:132916"
+ misc_feature complement(order(414287..414289,414296..414298,
+ 414374..414376,414380..414382))
+ /locus_tag="SARI_00409"
+ /note="TPP binding site [chemical binding]; other site"
+ /db_xref="CDD:132916"
+ misc_feature complement(413642..413989)
+ /locus_tag="SARI_00409"
+ /note="Transketolase, C-terminal domain; Region:
+ Transketolase_C; pfam02780"
+ /db_xref="CDD:217227"
+ gene complement(415624..416574)
+ /locus_tag="SARI_00410"
+ CDS complement(415624..416574)
+ /locus_tag="SARI_00410"
+ /inference="protein motif:Gene3D:IPR013785"
+ /inference="protein motif:HMMPanther:IPR001585"
+ /inference="protein motif:HMMPfam:IPR001585"
+ /inference="protein motif:HMMTigr:IPR004730"
+ /inference="protein motif:ScanRegExp:IPR001585"
+ /inference="similar to AA sequence:SwissProt:Q8ZN83"
+ /note="'KEGG: stm:STM2473 9.0e-163 talA; transaldolase A
+ K00616;
+ COG: COG0176 Transaldolase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="transaldolase A"
+ /protein_id="YP_001569488.1"
+ /db_xref="GI:161502376"
+ /db_xref="InterPro:IPR001585"
+ /db_xref="InterPro:IPR004730"
+ /db_xref="InterPro:IPR013785"
+ /translation="MNQLDGIKQFTTVVADSGDIESIRHYQPQDATTNPSLLLKAAGL
+ EQYSHLIEDAIAWGKKHGGTQEQQVTAASDKLAVNFGAEILKSIPGRVSTEIDARLSF
+ DKEKSIEKARHLVALYQQQNIDKSRILIKLAATWEGIRAAGQLEKEGINCNLTLLFSF
+ AQARACAEAGVYLISPFVGRIYDWYQARSPMDPYIVEEDPGVKSVRNIYDYFKQHRYE
+ TIVMGASFRRTEQILALTGCDRLTISPNLLKELKEKEEPVIRKLVPSSQMFHRPTPMT
+ EAEFRWEHNQDAMAVEKLSEGIRLFAVDQRKLEDLLAAKL"
+ misc_feature complement(415627..416574)
+ /locus_tag="SARI_00410"
+ /note="transaldolase-like protein; Provisional; Region:
+ PTZ00411"
+ /db_xref="CDD:240406"
+ misc_feature complement(415639..416571)
+ /locus_tag="SARI_00410"
+ /note="Transaldolases including both TalA and TalB;
+ Region: Transaldolase_TalAB; cd00957"
+ /db_xref="CDD:188644"
+ misc_feature complement(order(416035..416037,416050..416052,
+ 416110..416112,416116..416118,416182..416184,
+ 416290..416292,416296..416298,416470..416475,
+ 416479..416481,416527..416529))
+ /locus_tag="SARI_00410"
+ /note="active site"
+ /db_xref="CDD:188644"
+ misc_feature complement(order(415678..415680,415690..415692,
+ 415699..415701,415717..415722,415732..415734,
+ 415741..415743,416266..416268))
+ /locus_tag="SARI_00410"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:188644"
+ misc_feature complement(416182..416184)
+ /locus_tag="SARI_00410"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:188644"
+ gene 416846..419125
+ /locus_tag="SARI_00411"
+ CDS 416846..419125
+ /locus_tag="SARI_00411"
+ /inference="protein motif:HMMPfam:IPR002505"
+ /inference="protein motif:HMMPfam:IPR012301"
+ /inference="protein motif:HMMPfam:IPR012302"
+ /inference="protein motif:HMMPIR:IPR012188"
+ /inference="protein motif:ScanRegExp:IPR001891"
+ /note="NADP-dependent; catalyzes the oxidative
+ decarboxylation of malate to form pyruvate; decarboxylates
+ oxaloacetate"
+ /codon_start=1
+ /transl_table=11
+ /product="malic enzyme"
+ /protein_id="YP_001569489.1"
+ /db_xref="GI:161502377"
+ /db_xref="InterPro:IPR001891"
+ /db_xref="InterPro:IPR002505"
+ /db_xref="InterPro:IPR012188"
+ /db_xref="InterPro:IPR012301"
+ /db_xref="InterPro:IPR012302"
+ /translation="MDEQLKQSALDFHEFPVPGKIQVSPTKPLATQRDLALAYSPGVA
+ APCLEIEKDPLAAYKYTARGNLVAVISNGTAVLGLGNIGALAGKPVMEGKGVLFKKFA
+ GIDVFDIEVDELDPDKFINVVAALEPTFGGVNLEDIKAPECFYIEQKLRERMNIPVFH
+ DDQHGTAIISTAAILNGLRVVEKNISDVRMVVSGAGAAAIACMNLLVALGMQKHNIVV
+ CDSKGVIYKGREPNMAETKAAYAVDDSGKRTLDDVIDGADIFLGCSGPKVLTQEMVKK
+ MARAPMILALANPEPEILPPLAKEVRPDAIICTGRSDYPNQVNNVLCFPFIFRGALDV
+ GATAINEEMKLAAVHAIAELAHAEQSEVVASAYGDQDLSFGPEYIIPKPFDPRLIVKI
+ APAVAKAAMDSGVATRPIADFDAYIDKLTEFVYKTNLFMKPIFSQARKDPQRVVLPEG
+ EEARVLHATQELITLGLAKPILIGRPSVIEMRIQKLGLQIKAGVDFEIVNNESDPRFK
+ EYWSEYYQIMKRRGVTQEQAQRAMIGNHTAIGAIMVQRGEADAMICGTIGDYHEHFGV
+ VKAVFDYRDGVHTAGAMNALLLPSGNTFIADTYVNEDPTPEQLAEITVMAAETVRRFG
+ IEPKVALLSHSNFGSSNSLSASKMRETLERVRERAPDLMIDGEMHGDAALVESIRNDR
+ MPDSSLKGAANILVMPNMEAARISYNLLRVSSSEGVTVGPVLMGVSKPVHVLTPIASV
+ RRIVNMVALAVVEAQTTPL"
+ misc_feature 416852..419113
+ /locus_tag="SARI_00411"
+ /note="bifunctional malic enzyme
+ oxidoreductase/phosphotransacetylase; Reviewed; Region:
+ PRK07232"
+ /db_xref="CDD:235976"
+ misc_feature 416897..417298
+ /locus_tag="SARI_00411"
+ /note="Malic enzyme, N-terminal domain; Region: malic;
+ pfam00390"
+ /db_xref="CDD:215894"
+ misc_feature 417332..418009
+ /locus_tag="SARI_00411"
+ /note="NAD(P) binding domain of malic enzyme (ME),
+ subgroup 2; Region: NAD_bind_2_malic_enz; cd05311"
+ /db_xref="CDD:133453"
+ misc_feature order(417428..417439,417503..417508,417632..417637,
+ 417647..417649,417701..417709,417773..417775,
+ 417797..417799,417803..417805)
+ /locus_tag="SARI_00411"
+ /note="putative NAD(P) binding site [chemical binding];
+ other site"
+ /db_xref="CDD:133453"
+ misc_feature 418133..419116
+ /locus_tag="SARI_00411"
+ /note="Phosphotransacetylase [Energy production and
+ conversion]; Region: Pta; COG0280"
+ /db_xref="CDD:223357"
+ gene 419583..421235
+ /locus_tag="SARI_00412"
+ CDS 419583..421235
+ /locus_tag="SARI_00412"
+ /inference="protein motif:HMMPfam:IPR000917"
+ /inference="protein motif:ScanRegExp:IPR000917"
+ /inference="similar to AA sequence:INSD:ABJ03257.1"
+ /note="'KEGG: ecc:c4719 1.3e-264 aslA; arylsulfatase
+ K01130;
+ COG: COG3119 Arylsulfatase A and related enzymes;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569490.1"
+ /db_xref="GI:161502378"
+ /db_xref="InterPro:IPR000917"
+ /translation="MDFTFSPRQLAIAIAAAIPLAVSAAETPMVATSQNGFAGYDHPN
+ QYIGVSTTKLADNMMPVISHPTQERETRQKLADIEKKTGKKPNIVVFILDDVGWMDVG
+ FNGGGVAVGNPTPDIDAVASQGLILTSAYSQPSSSPTRATIMTGQYSVHHGILMPPMY
+ GMPGGLEGLTTLPQLLHEQGYVTQAIGKWHMGENTGSQPQNVGFDDFRGFNSVSDMYT
+ EWRDPNMNPEVALSPSRYQYIKNLPFDKNDVHAVRGGKQEAVAEITPKYMEDLDQRWM
+ KYGVDFINKMAKNDKPFFLYYGTRGCHFDNYPNAHYAGRSPARTSYSDCIVEMNDVFA
+ NLYRALETSGQLDNTLIVFTSDNGPEAEVPPHGRTPFRGAKGSTWEGGVRVPTFVYWK
+ GMIQPRKSDGIVDLADLFPTSLSLAGHPGAELAKLVPSKTFIDGVDQSSFFLGTNGQS
+ NRKAEHYFLNGELSAVRIDEFKYHLLIQQPFAFTQTGYQGGFTGAITKTAGTTIFNLY
+ TNPQEDDSVGVRHIPMGVPLQTEVHNYMEILKKYPPKVQIKL"
+ misc_feature 419832..421022
+ /locus_tag="SARI_00412"
+ /note="Arylsulfatase A and related enzymes [Inorganic ion
+ transport and metabolism]; Region: AslA; COG3119"
+ /db_xref="CDD:225661"
+ misc_feature 419838..420944
+ /locus_tag="SARI_00412"
+ /note="Sulfatase; Region: Sulfatase; pfam00884"
+ /db_xref="CDD:216172"
+ gene complement(421279..422520)
+ /locus_tag="SARI_00413"
+ CDS complement(421279..422520)
+ /locus_tag="SARI_00413"
+ /inference="protein motif:HMMPfam:IPR007197"
+ /inference="similar to AA sequence:REFSEQ:YP_026259.1"
+ /note="'KEGG: syg:sync_2368 3.1e-25 arylsulfatase
+ regulator;
+ COG: COG0641 Arylsulfatase regulator (Fe-S
+ oxidoreductase);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569491.1"
+ /db_xref="GI:161502379"
+ /db_xref="InterPro:IPR007197"
+ /translation="MLQNIPTQAFHAMAKPSGSDCNLNCAYCFYLEKHALYNHTPQPR
+ MTDAMLERYVRDYIASVAPEAEVAFTWQGGEPTLLGLEFYRHAVALQAKYGAGRQISN
+ SFQTNGVLLDDAWCEFFVRHHFLIGLSLDGPEEIHNEYRLTKGGRPTHKLVMRALALL
+ QQHGVEYNVLACVNRRSARSAEKIYDFFVASGVEFIQFIPVVERLADESAQQSGLTLH
+ APGDAYGTLTDWSVIPEDYGRFLCAVFDRWITRDVGKVFVMNIEWAFANFVGAPGTVC
+ HHQPTCGRSVVVEHNGDVYACDHYVYPQFHLGNLNEQTFAAMLDSPQQEAFGKDKYAT
+ LPEQCRQCPVLRACWGGCPKHRFALTKEGKPGLNYLCAGFRAYFQHLPPYLKAMADLM
+ AMGRPASDIMHAHLHYARSDK"
+ misc_feature complement(421348..422490)
+ /locus_tag="SARI_00413"
+ /note="anaerobic sulfatase-maturating enzyme; Region:
+ sulfatase_rSAM; TIGR03942"
+ /db_xref="CDD:188457"
+ misc_feature complement(<422014..422460)
+ /locus_tag="SARI_00413"
+ /note="Radical SAM superfamily. Enzymes of this family
+ generate radicals by combining a 4Fe-4S cluster and
+ S-adenosylmethionine (SAM) in close proximity. They are
+ characterized by a conserved CxxxCxxC motif, which
+ coordinates the conserved iron-sulfur cluster; Region:
+ Radical_SAM; cd01335"
+ /db_xref="CDD:100105"
+ misc_feature complement(order(422134..422136,422200..422208,
+ 422296..422301,422305..422307,422434..422442,
+ 422446..422448,422452..422454,422458..422460))
+ /locus_tag="SARI_00413"
+ /note="FeS/SAM binding site; other site"
+ /db_xref="CDD:100105"
+ misc_feature complement(421408..421677)
+ /locus_tag="SARI_00413"
+ /note="radical SAM additional 4Fe4S-binding SPASM domain;
+ Region: rSAM_more_4Fe4S; TIGR04085"
+ /db_xref="CDD:234461"
+ gene 422834..423169
+ /locus_tag="SARI_00414"
+ CDS 422834..423169
+ /locus_tag="SARI_00414"
+ /inference="protein motif:HMMPfam:IPR000249"
+ /inference="protein motif:HMMPIR:IPR009307"
+ /inference="similar to AA sequence:INSD:AAV76409.1"
+ /note="'KEGG: sat:SYN_00303 0.0048 hydroxyethylTHIazole
+ kinase K00878;
+ COG: COG4810 Ethanolamine utilization protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569492.1"
+ /db_xref="GI:161502380"
+ /db_xref="InterPro:IPR000249"
+ /db_xref="InterPro:IPR009307"
+ /translation="MNKERIIQEFVPGKQVTLAHLIAHPGEELAKKIGVPDAGAIGIM
+ TLTPGETAMIAGDLAMKAADVHIGFLDRFSGALVIYGTVGAVEEALLQTVSGLGRLLN
+ FTLCELTKS"
+ misc_feature 422843..423166
+ /locus_tag="SARI_00414"
+ /note="1,2-propanediol utilization protein U
+ (PduU)/ethanolamine utilization protein S (EutS),
+ Bacterial Micro-Compartment (BMC) domain; Region:
+ BMC_PduU-EutS; cd07046"
+ /db_xref="CDD:132886"
+ misc_feature order(422966..422968,422975..422977,423002..423004,
+ 423011..423016,423032..423034,423047..423049,
+ 423053..423055)
+ /locus_tag="SARI_00414"
+ /note="putative hexamer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:132886"
+ misc_feature 423047..423049
+ /locus_tag="SARI_00414"
+ /note="putative hexagonal pore; other site"
+ /db_xref="CDD:132886"
+ gene 423182..423661
+ /locus_tag="SARI_00415"
+ CDS 423182..423661
+ /locus_tag="SARI_00415"
+ /inference="protein motif:HMMPIR:IPR012381"
+ /inference="protein motif:HMMTigr:IPR012381"
+ /inference="similar to AA sequence:INSD:AAL21363.1"
+ /note="'KEGG: eci:UTI89_C2785 4.7e-70 eutP; ethanolamine
+ utilization protein EutP K04029;
+ COG: COG4917 Ethanolamine utilization protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569493.1"
+ /db_xref="GI:161502381"
+ /db_xref="InterPro:IPR012381"
+ /translation="MKRIAFVGAVGAGKTTLFNALRGNYSLARKTQAVEFNDHGDIDT
+ PGEYFSHPRWYHALITTLQDVDTLIYVHAANDKESRLPAGLLDVGTRKRHIAVISKTD
+ MPDADIAATRQLLCEIGFREPIFELNGHDPQSVRQLVDYLAALSEQEEEAGEKTYHS"
+ misc_feature 423194..423610
+ /locus_tag="SARI_00415"
+ /note="Rat sarcoma (Ras)-like superfamily of small
+ guanosine triphosphatases (GTPases); Region:
+ Ras_like_GTPase; cd00882"
+ /db_xref="CDD:206648"
+ misc_feature 423203..423226
+ /locus_tag="SARI_00415"
+ /note="G1 box; other site"
+ /db_xref="CDD:206648"
+ misc_feature order(423209..423229,423317..423319,423476..423481,
+ 423485..423487,423563..423571)
+ /locus_tag="SARI_00415"
+ /note="GTP/Mg2+ binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:206648"
+ misc_feature 423272..423274
+ /locus_tag="SARI_00415"
+ /note="G2 box; other site"
+ /db_xref="CDD:206648"
+ misc_feature 423284..423292
+ /locus_tag="SARI_00415"
+ /note="Switch I region; other site"
+ /db_xref="CDD:206648"
+ misc_feature 423308..423319
+ /locus_tag="SARI_00415"
+ /note="G3 box; other site"
+ /db_xref="CDD:206648"
+ misc_feature order(423314..423319,423377..423382)
+ /locus_tag="SARI_00415"
+ /note="Switch II region; other site"
+ /db_xref="CDD:206648"
+ misc_feature 423476..423487
+ /locus_tag="SARI_00415"
+ /note="G4 box; other site"
+ /db_xref="CDD:206648"
+ misc_feature 423563..423571
+ /locus_tag="SARI_00415"
+ /note="G5 box; other site"
+ /db_xref="CDD:206648"
+ gene 423639..424328
+ /locus_tag="SARI_00416"
+ CDS 423639..424328
+ /locus_tag="SARI_00416"
+ /inference="protein motif:HMMPfam:IPR010424"
+ /inference="protein motif:superfamily:IPR011051"
+ /inference="similar to AA sequence:REFSEQ:NP_461403.1"
+ /note="'COG: COG4766 Ethanolamine utilization protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569494.1"
+ /db_xref="GI:161502382"
+ /db_xref="InterPro:IPR010424"
+ /db_xref="InterPro:IPR011051"
+ /translation="MKKLITANDIRAAHARGEQAMSVVLRASIITPEAREVAELLGFT
+ ITECDESVPASTSTQACKSESQRIREAIIAQLPEGQFTESLVAQLMEKVLKEKQSLEL
+ GTMQPSFTSVTGKGGVKVIDGSSVKFGRFDGAEPHCVGLTDLVTEQDGSSMAAGFMQW
+ DNAFFPWTLNYDEIDMVLEGELHVRHEGETLIAKAGDVMFIPKGSSIEFGTPTSVRFL
+ YVAWPANWQSV"
+ misc_feature 423639..424325
+ /locus_tag="SARI_00416"
+ /note="ethanolamine utilization protein EutQ; Provisional;
+ Region: PRK15457"
+ /db_xref="CDD:185354"
+ misc_feature 423804..424325
+ /locus_tag="SARI_00416"
+ /note="Ethanolamine utilization protein [Amino acid
+ transport and metabolism]; Region: EutQ; COG4766"
+ /db_xref="CDD:227107"
+ gene 424325..425128
+ /locus_tag="SARI_00417"
+ CDS 424325..425128
+ /locus_tag="SARI_00417"
+ /inference="protein motif:HMMPfam:IPR002779"
+ /inference="protein motif:HMMPIR:IPR009194"
+ /inference="similar to AA sequence:REFSEQ:NP_461402.1"
+ /note="'KEGG: stm:STM2467 2.6e-133 eutT; putative
+ cobalamin adenosyltransferase, ethanolamine utilization
+ K04032;
+ COG: COG4812 Ethanolamine utilization cobalamin
+ adenosyltransferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569495.1"
+ /db_xref="GI:161502383"
+ /db_xref="InterPro:IPR002779"
+ /db_xref="InterPro:IPR009194"
+ /translation="MNDFITETWLRANHTLSEGSEIHLPADARLTPSARELLESRRLR
+ IKFLDQQGRLFVDDDEQQPQSVHGLTSSDTYPQACCELCRQPVVKKPDTLTHLTADKM
+ VAKSDPRLGFRAALDGAIALTVWLQIELAELWQPWLLDIRSRLGNIMRADALDEPLAA
+ QSIVGLSEDELHRLSHQPLRYLDHDHLVPEASHGRDAALLNLLRTKVRETETLAAQVF
+ ITRSFDVLRPDILQALNRLSSTVYVMMILSVAKHPLTVAQIQQRLGGDQ"
+ misc_feature 424325..425125
+ /locus_tag="SARI_00417"
+ /note="ethanolamine utilization cobalamin
+ adenosyltransferase; Provisional; Region: PRK15020"
+ /db_xref="CDD:237884"
+ gene 425125..426141
+ /gene="eutD"
+ /locus_tag="SARI_00418"
+ CDS 425125..426141
+ /gene="eutD"
+ /locus_tag="SARI_00418"
+ /inference="protein motif:HMMPfam:IPR002505"
+ /inference="protein motif:HMMPIR:IPR012147"
+ /inference="protein motif:HMMTigr:IPR004614"
+ /inference="similar to AA sequence:REFSEQ:YP_217449.1"
+ /note="in Salmonella this enzyme is required for
+ ethanolamine catabolism; has higher affinity for CoA than
+ Pta"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphotransacetylase"
+ /protein_id="YP_001569496.1"
+ /db_xref="GI:161502384"
+ /db_xref="InterPro:IPR002505"
+ /db_xref="InterPro:IPR004614"
+ /db_xref="InterPro:IPR012147"
+ /translation="MIIERARELALRAPARVVFPDALDERVLKAAHYLQQHGLARPIL
+ VASPFVLRQFALSHRMALDGIQVIAPPGNLPMRESFAQRWLARAGEKTPSDAVEKLND
+ PLMFAAAMVSAGDADVCIAGNLSSTANVLRAGLRVIGLQPGCQTLSSIFLMLPQYAGQ
+ ALGFADCSVVPQPTAAQLADIAIASADTWRAITGEEPRVAMLSFSSNGSARHPNVANV
+ QQATEIVRERAPQLLVDGELQFDAAFVPEVAAQKAPDSPLQGRANVMIFPSLEAGNIG
+ YKIAQRLGGYRAVGPLIQGLAAPLHDLSRGCSVQEIIELALVAAVPRQADVSSESRLQ
+ TLVE"
+ misc_feature 425173..426102
+ /gene="eutD"
+ /locus_tag="SARI_00418"
+ /note="phosphotransacetylase; Reviewed; Region: eutD;
+ PRK09653"
+ /db_xref="CDD:236609"
+ gene 426182..426472
+ /locus_tag="SARI_00419"
+ CDS 426182..426472
+ /locus_tag="SARI_00419"
+ /inference="protein motif:BlastProDom:IPR000249"
+ /inference="protein motif:HMMPfam:IPR000249"
+ /inference="protein motif:ScanRegExp:IPR000249"
+ /inference="similar to AA sequence:INSD:AAV76414.1"
+ /note="'COG: COG4577 Carbon dioxide concentrating
+ mechanism/carboxysome shell protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569497.1"
+ /db_xref="GI:161502385"
+ /db_xref="InterPro:IPR000249"
+ /translation="MEALGMIETRGLVALIEASDAMVKAARVKLVGVKQIGGGLVTAM
+ VRGDVAACKAATDAGAAAAQRIGELVSVHVIPRPHGDLEEVFPISFKGDSNI"
+ misc_feature 426182..>426460
+ /locus_tag="SARI_00419"
+ /note="Carbon dioxide concentrating mechanism/carboxysome
+ shell protein [Secondary metabolites biosynthesis,
+ transport, and catabolism / Energy production and
+ conversion]; Region: CcmK; COG4577"
+ /db_xref="CDD:226943"
+ misc_feature 426188..426439
+ /locus_tag="SARI_00419"
+ /note="Carbon dioxide concentrating mechanism K
+ (CcmK)-like proteins, Bacterial Micro-Compartment (BMC)
+ domain; Region: BMC_CcmK_like; cd07045"
+ /db_xref="CDD:132885"
+ misc_feature order(426203..426205,426212..426214,426239..426241,
+ 426248..426253,426269..426271,426284..426286,
+ 426293..426301,426392..426400,426404..426406,
+ 426410..426415,426422..426424)
+ /locus_tag="SARI_00419"
+ /note="Hexamer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:132885"
+ misc_feature 426284..426286
+ /locus_tag="SARI_00419"
+ /note="Hexagonal pore residue; other site"
+ /db_xref="CDD:132885"
+ gene 426585..426872
+ /locus_tag="SARI_00420"
+ CDS 426585..426872
+ /locus_tag="SARI_00420"
+ /inference="protein motif:BlastProDom:IPR004992"
+ /inference="protein motif:HMMPfam:IPR004992"
+ /inference="similar to AA sequence:INSD:AAV76415.1"
+ /note="'COG: COG4576 Carbon dioxide concentrating
+ mechanism/carboxysome shell protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="ethanolamine catabolic microcompartment shell
+ protein EutN"
+ /protein_id="YP_001569498.2"
+ /db_xref="GI:448236195"
+ /db_xref="InterPro:IPR004992"
+ /translation="MKLAVVTGQIVCTVRHQGLAHDKLLMVEMIDAKGNPDGQCAVAI
+ DSIGAGTGEWVLLVSGSSARQAHRSELSPVDLCVIGIVDEVVAGGKVVFHK"
+ misc_feature 426585..426833
+ /locus_tag="SARI_00420"
+ /note="Ethanolamine utilisation protein and carboxysome
+ structural protein domain family; Region: EutN_CcmL;
+ cd01614"
+ /db_xref="CDD:133473"
+ misc_feature order(426585..426587,426591..426593,426603..426611,
+ 426615..426626,426708..426710,426723..426725,
+ 426756..426758,426774..426776,426804..426812,
+ 426819..426821,426825..426827,426831..426833)
+ /locus_tag="SARI_00420"
+ /note="Hexamer/Pentamer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:133473"
+ misc_feature order(426588..426590,426666..426668,426675..426677,
+ 426702..426704,426774..426776,426792..426794,
+ 426807..426809)
+ /locus_tag="SARI_00420"
+ /note="central pore; other site"
+ /db_xref="CDD:133473"
+ gene 426884..428287
+ /locus_tag="SARI_00421"
+ CDS 426884..428287
+ /locus_tag="SARI_00421"
+ /inference="protein motif:HMMPfam:IPR002086"
+ /inference="protein motif:HMMPIR:IPR012408"
+ /inference="similar to AA sequence:INSD:AAL21357.1"
+ /note="'KEGG: rru:Rru_A0914 5.4e-101 aldehyde
+ dehydrogenase K04021;
+ COG: COG1012 NAD-dependent aldehyde dehydrogenases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569499.1"
+ /db_xref="GI:161502387"
+ /db_xref="InterPro:IPR002086"
+ /db_xref="InterPro:IPR012408"
+ /translation="MNQQDIEQVVKAVLLKMQDSSKPTSTVHEMGVFASLDDAVAAAK
+ LAQQGLKSVAMRQLAIHAIREAGEKHARELAELAVSETGMGRVDDKFAKNVAQARGTP
+ GVECLSPQVLTGDNGLTLIENAPWGVVASVTPSTNPAATVINNAISLIAAGNSVVFAP
+ HPAAKKVSQRAITLLNQAVVAAGGPENLLVTVANPDIETAQRLFKYPGIGLLVVTGGE
+ AVVDAARKHTNKRLIAAGAGNPPVVVDETADLSRAAQSIVKGASFDNNIICADEKVLI
+ VVDSVADELMRLMEGQHAVKLTAAQAEQLQPVLLKNIDERGKGTVSRDWVGRDAGKIA
+ AAIGLNVPQQTRLLFVETPASHPFAVTEMMMPVLPVVRVANVEEAIALAVQLEGGCHH
+ TAAMHSRNIDNMNQMANAIDTSIFVKNGPCIAGLGLGGEGWTTMTITTPTGEGVTSAR
+ TFVRLRRCVLVDAFRIV"
+ misc_feature 426974..428266
+ /locus_tag="SARI_00421"
+ /note="Ethanolamine utilization protein EutE-like; Region:
+ ALDH_EutE; cd07121"
+ /db_xref="CDD:143439"
+ misc_feature 427688..427690
+ /locus_tag="SARI_00421"
+ /note="putative catalytic cysteine [active]"
+ /db_xref="CDD:143439"
+ gene 428298..429137
+ /locus_tag="SARI_00422"
+ CDS 428298..429137
+ /locus_tag="SARI_00422"
+ /inference="protein motif:HMMTigr:IPR013366"
+ /inference="similar to AA sequence:REFSEQ:YP_217445.1"
+ /note="'COG: COG4820 Ethanolamine utilization protein,
+ possible chaperonin;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569500.1"
+ /db_xref="GI:161502388"
+ /db_xref="InterPro:IPR013366"
+ /translation="MAHDEQLWLTPRLQKAAALCHQTPAASDTPLWLGVDLGTCDVVS
+ IVVDSDAQPVAVCLDWADVVRDGIVWDFFGAVTIVRRHLDTLEQQLGCRFTHAATSFP
+ PGTDPRISINVLESAGLEVSHALDEPTAVADLLQLDNAGVVDIGGGTTGIAIVKQGKV
+ TWSADEATGGHHISLTLAGNRRIPLEEAEQYKRSNAQEIWPIVKPVYEKMAEIVARHI
+ AGQGVTDLWLAGGSCMQPGVEALFRQRFPELQVHLPQHSLFMTPLAIANSGRAKAEGL
+ YAS"
+ misc_feature 428304..429119
+ /locus_tag="SARI_00422"
+ /note="Ethanolamine utilization protein, possible
+ chaperonin [Amino acid transport and metabolism]; Region:
+ EutJ; COG4820"
+ /db_xref="CDD:227157"
+ misc_feature 428394..>428693
+ /locus_tag="SARI_00422"
+ /note="Nucleotide-Binding Domain of the sugar
+ kinase/HSP70/actin superfamily; Region:
+ NBD_sugar-kinase_HSP70_actin; cd00012"
+ /db_xref="CDD:212657"
+ misc_feature order(428403..428414,428418..428420,428424..428426,
+ 428676..428678)
+ /locus_tag="SARI_00422"
+ /note="nucleotide binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:212657"
+ gene 429127..430314
+ /locus_tag="SARI_00423"
+ CDS 429127..430314
+ /locus_tag="SARI_00423"
+ /inference="protein motif:HMMPfam:IPR001670"
+ /inference="protein motif:ScanRegExp:IPR001670"
+ /inference="similar to AA sequence:REFSEQ:YP_217444.1"
+ /note="'KEGG: eci:UTI89_C2777 2.3e-180 eutG, yffV;
+ ethanolamine utilization protein EutG iron-containing
+ alcohol dehydrogenase K04022;
+ COG: COG1454 Alcohol dehydrogenase, class IV;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569501.1"
+ /db_xref="GI:161502389"
+ /db_xref="InterPro:IPR001670"
+ /translation="MQAELQTALFQAFDTLNLQRVKTFSVPPVTLCGLGALSACGQEA
+ QSRGLSHLFVMVDSFLHQAGMTAPLARSLAMKGVAMTVWPCPPGEPCITDVCAAVAQL
+ REAACDGVVAFGGGSVLDAAKAVALLVTNPDQTLSAMTERSTLRPRLPLIAVPTTAGT
+ GSETTNVTVIIDAASGRKQVLAHASLMPDVAILDAAVTEGVPPNVTAMTGIDALTHAI
+ EAYSALNATPFTDSLAIGAIAMIGKSLPKAVGYGHDLTARENMLLASCMAGMAFSSAG
+ LGLCHAMAHQPGAALHIPHGLANAMLLPTVMGFNRMVCRERFSQIGRALTNKKSDDRD
+ AIAAVSELIAEVGQSKRLADAGARPEHYSAWAQAAQDDICMRTNPRTASQVQIIELYV
+ AAQ"
+ misc_feature 429127..430311
+ /locus_tag="SARI_00423"
+ /note="ethanol dehydrogenase EutG; Provisional; Region:
+ PRK15454"
+ /db_xref="CDD:185351"
+ misc_feature 429205..430299
+ /locus_tag="SARI_00423"
+ /note="iron-containing alcohol dehydrogenases
+ (Fe-ADH)-like; Region: Fe-ADH; cd08551"
+ /db_xref="CDD:173961"
+ misc_feature order(429295..429297,429469..429477,429484..429486,
+ 429493..429495,429592..429597,429601..429603,
+ 429658..429663,429715..429717,429739..429741,
+ 429760..429762,429772..429774,429967..429969,
+ 429979..429981,430009..430011)
+ /locus_tag="SARI_00423"
+ /note="active site"
+ /db_xref="CDD:173961"
+ misc_feature order(429760..429762,429772..429774,429967..429969,
+ 430009..430011)
+ /locus_tag="SARI_00423"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:173961"
+ gene 430360..431586
+ /locus_tag="SARI_00424"
+ CDS 430360..431586
+ /locus_tag="SARI_00424"
+ /inference="protein motif:HMMPfam:IPR007441"
+ /inference="similar to AA sequence:REFSEQ:YP_217443.1"
+ /note="'COG: COG3192 Ethanolamine utilization protein;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569502.1"
+ /db_xref="GI:161502390"
+ /db_xref="InterPro:IPR007441"
+ /translation="MGINEIIMYIMMFFMLIAAVDRVLSQFGGSARFLGKFGKSIEGA
+ GGQFEEGFMAMGALGLAMVGMTALAPVLAHVLGPVIIPVYEMLGANPSMFAGTLLACD
+ MGGFFLAKELAGGDVAAWLYSGLILGSMMGPTIVFSIPVALGIIEPSDRRYLALGVLA
+ GIVTIPIGCIAGGLIAMYSGVQINGQPVEFTFTLILMNMIPVLIVAVLVALGLKFIPE
+ KMINGFQIFAKFLVALITIGLAAAVVKFLLGWELIPGLDPIFMAPGDKPGEVMRAIEV
+ IGSISCVLLGAYPMVLLLTRWFEKPLMNVGKLLNVNNIAAAGMVATLANNIPMFGMMK
+ QMDTRGKVINCAFAVSAAFALGDHLGFAAANMNAMIFPMIVGKLIGGVTAIGVAMMLV
+ PKDDAAQVKTEAEAQS"
+ misc_feature 430360..431583
+ /locus_tag="SARI_00424"
+ /note="Ethanolamine utilization protein [Amino acid
+ transport and metabolism]; Region: EutH; COG3192"
+ /db_xref="CDD:225733"
+ unsure 430527..430561
+ /locus_tag="SARI_00424"
+ /note="Sequence derived from one plasmid subclone"
+ gene 431583..432986
+ /gene="eutA"
+ /locus_tag="SARI_00425"
+ CDS 431583..432986
+ /gene="eutA"
+ /locus_tag="SARI_00425"
+ /inference="protein motif:HMMPfam:IPR009377"
+ /inference="similar to AA sequence:INSD:AAL21353.1"
+ /note="ethanolamine utilization protein EutA"
+ /codon_start=1
+ /transl_table=11
+ /product="reactivating factor for ethanolamine ammonia
+ lyase"
+ /protein_id="YP_001569503.1"
+ /db_xref="GI:161502391"
+ /db_xref="InterPro:IPR009377"
+ /translation="MNTRQLLSVGIDIGTTTTQVIFSRLELVNRAAVSQVPRYEFIKR
+ DISWQSPVFFTPVDKQGGLKEAELKTLILAQYQAAGIAPESVDSGAIIITGESAKTRN
+ ARPAVMALSQSLGDFVVASAGPHLESVIAGHGAGAQSLSELRMCRVLNIDIGGGTSNY
+ ALFDAGKVSGTACLNVGGRLLETDGQGRVVHAHQPGQRIIDEVFGAGTDARALTVAQL
+ GQAARRMAALIVEVIAGTLTPLAQSLMQTGLLPADITPEVITLSGGVGECYRHQPADP
+ FCFSDIGPLLATALHEHPRLREMNVQFPAQTVRATVIGAGAHTLSLSGSTIWLENVQL
+ PLRNLPVAIPQDDADLVNAWRQALLQLDLDPQTDAYVLALPATLPVRYAALLTVIDAL
+ TAFVARYPNPHPLLVVAEQDLGKALGMLLRPQLPQLPLAVIDEVVVRAGDYIDIGTPL
+ FGGSVVPVTVKSLAFPS"
+ misc_feature 431583..432983
+ /gene="eutA"
+ /locus_tag="SARI_00425"
+ /note="reactivating factor for ethanolamine ammonia lyase;
+ Provisional; Region: eutA; PRK10719"
+ /db_xref="CDD:236743"
+ gene 432998..434359
+ /locus_tag="SARI_00426"
+ CDS 432998..434359
+ /locus_tag="SARI_00426"
+ /inference="protein motif:HMMPfam:IPR010628"
+ /inference="similar to AA sequence:INSD:AAL21352.1"
+ /note="'KEGG: spt:SPA0410 1.3e-241 eutB; ethanolamine
+ ammonia-lyase heavy chain K03735;
+ COG: COG4303 Ethanolamine ammonia-lyase, large subunit;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569504.1"
+ /db_xref="GI:161502392"
+ /db_xref="InterPro:IPR010628"
+ /translation="MKLKTTLFGNVYQFKDVKEVLAKANELRSGDVLAGVAAASSQER
+ VAAKQVLSEMTVADIRNNPVIAYEEDCVTRLIQDDVNETAYNRIKNWSISELREYVLS
+ DETSVDDIAFTRKGLSSEVVAAVAKICSNADLIYGGKKMPVIKKANTTIGIPGTFSCR
+ LQPNDTRDDVQSIAAQIYEGLSFGSGDAVIGVNPVTDDVENLTRVLDTVYGVIDKFNI
+ PTQGCVLAHVTTQIEAIRRGAPGGLIFQSICGSEKGLKEFGVELAMLDEARAVGAEFN
+ RIAGENCLYFETGQGSALSAGANFGADQVTMEARNYGLARHYDPFLVNTVVGFIGPEY
+ LYNDRQIIRAGLEDHFMGKLSGISMGCDCCYTNHADADQNLNENLMILLATAGCNYIM
+ GMPLGDDIMLNYQTTAFHDTATVRQLLNLRPSPEFERWLETMGIMANGRLTKRAGDPS
+ LFF"
+ misc_feature 432998..434356
+ /locus_tag="SARI_00426"
+ /note="Ethanolamine ammonia-lyase, large subunit [Amino
+ acid transport and metabolism]; Region: EutB; COG4303"
+ /db_xref="CDD:226753"
+ misc_feature 433028..434353
+ /locus_tag="SARI_00426"
+ /note="Ethanolamine ammonia lyase large subunit (EutB);
+ Region: EutB; pfam06751"
+ /db_xref="CDD:203514"
+ gene 434378..435274
+ /locus_tag="SARI_00427"
+ CDS 434378..435274
+ /locus_tag="SARI_00427"
+ /inference="protein motif:HMMPfam:IPR009246"
+ /inference="similar to AA sequence:INSD:AAC78124.1"
+ /note="catalyzes the formation of acetaldehyde from
+ ethanolamine"
+ /codon_start=1
+ /transl_table=11
+ /product="ethanolamine ammonia-lyase small subunit"
+ /protein_id="YP_001569505.1"
+ /db_xref="GI:161502393"
+ /db_xref="InterPro:IPR009246"
+ /translation="MDQKQIEEIVRSVMASMGQDVPQPVAPSTQEGAKPQRAAPTATE
+ SCALDLGSAEAKAWIGVENPHRADVLTELRRSTAARVCTGRAGPRPRTQALLRFLADH
+ SRSKDTVLKEVPEEWVKAQGLLEVRSEISDKNRYLTRPDMGRRLSQEAIDALKSQCVM
+ NPDVQVVISDGLSTDAITANYEEILPPLLAGLKQAGLKVGTPFFVRYGRVKIEDQIGE
+ LLGAKVVILLVGERPGLGQSESLSCYAVYSPRVTTTVEADRTCISNIHQGGTPPVEAA
+ AVIVDLAKRMLEQKASGINMTR"
+ misc_feature 434378..435271
+ /locus_tag="SARI_00427"
+ /note="Ethanolamine ammonia-lyase, small subunit [Amino
+ acid transport and metabolism]; Region: EutC; COG4302"
+ /db_xref="CDD:226752"
+ gene 435284..435943
+ /locus_tag="SARI_00428"
+ CDS 435284..435943
+ /locus_tag="SARI_00428"
+ /inference="protein motif:HMMPfam:IPR000249"
+ /inference="protein motif:HMMPIR:IPR009193"
+ /inference="similar to AA sequence:INSD:AAX66360.1"
+ /note="'COG: COG4816 Ethanolamine utilization protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569506.1"
+ /db_xref="GI:161502394"
+ /db_xref="InterPro:IPR000249"
+ /db_xref="InterPro:IPR009193"
+ /translation="MPALDLIRPSVTAMRVIASVNDGFARELKLPPHIRSLGLITADS
+ DDVTYIAADEATKQAMVEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDA
+ MVASIENGAAFQWANDAENTAFLAHVVSRTGSYLSSTAGIALGDPMAYLVAPPLEATF
+ GIDAAMKSADVQLVTYVPPPSETNYSAAFLTGSQAACKAACNAFADAVLDIARNPVQR
+ A"
+ misc_feature 435287..435937
+ /locus_tag="SARI_00428"
+ /note="ethanolamine utilization protein EutL; Provisional;
+ Region: PRK15405"
+ /db_xref="CDD:185303"
+ misc_feature 435314..435622
+ /locus_tag="SARI_00428"
+ /note="ethanolamine utilization protein S (EutS),
+ Bacterial Micro-Compartment (BMC) domain repeat 1; Region:
+ BMC_EutL_repeat1; cd07049"
+ /db_xref="CDD:132889"
+ misc_feature order(435404..435406,435413..435415,435440..435442,
+ 435449..435454,435470..435472,435485..435487,
+ 435530..435532)
+ /locus_tag="SARI_00428"
+ /note="putative hexamer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:132889"
+ misc_feature 435485..435487
+ /locus_tag="SARI_00428"
+ /note="putative hexagonal pore; other site"
+ /db_xref="CDD:132889"
+ misc_feature 435674..435934
+ /locus_tag="SARI_00428"
+ /note="ethanolamine utilization protein S (EutS),
+ Bacterial Micro-Compartment (BMC) domain repeat 2; Region:
+ BMC_EutL_repeat2; cd07050"
+ /db_xref="CDD:132890"
+ misc_feature order(435737..435739,435746..435748,435770..435772,
+ 435779..435784,435800..435802,435815..435817,
+ 435836..435838)
+ /locus_tag="SARI_00428"
+ /note="putative hexamer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:132890"
+ misc_feature 435815..435817
+ /locus_tag="SARI_00428"
+ /note="putative hexagonal pore; other site"
+ /db_xref="CDD:132890"
+ gene 435956..436450
+ /locus_tag="SARI_00429"
+ CDS 435956..436450
+ /locus_tag="SARI_00429"
+ /inference="protein motif:BlastProDom:IPR000249"
+ /inference="protein motif:HMMPfam:IPR000249"
+ /inference="protein motif:ScanRegExp:IPR000249"
+ /inference="similar to AA sequence:REFSEQ:NP_461390.1"
+ /note="'COG: COG4577 Carbon dioxide concentrating
+ mechanism/carboxysome shell protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569507.1"
+ /db_xref="GI:161502395"
+ /db_xref="InterPro:IPR000249"
+ /translation="MNNALGLLEVDGMVAAVDAADAMLKAANVRLLSHQVLDPGRLTL
+ VVEGDLAACRAALDAGSAAAQRAGRVISRKEIGRPEEDTQWLIGGFTRAPTSPEKTSD
+ VPATPEFAEALLALLASVRQGMTAGEVAAHFGWPLEQARNVLESLFSDGVLRKRSSRY
+ RIKN"
+ misc_feature 435956..436447
+ /locus_tag="SARI_00429"
+ /note="carboxysome structural protein EutK; Provisional;
+ Region: PRK15466"
+ /db_xref="CDD:185363"
+ misc_feature 435965..436216
+ /locus_tag="SARI_00429"
+ /note="Carbon dioxide concentrating mechanism K
+ (CcmK)-like proteins, Bacterial Micro-Compartment (BMC)
+ domain; Region: BMC_CcmK_like; cd07045"
+ /db_xref="CDD:132885"
+ misc_feature order(435980..435982,435989..435991,436016..436018,
+ 436025..436030,436046..436048,436061..436063,
+ 436070..436078,436169..436177,436181..436183,
+ 436187..436192,436199..436201)
+ /locus_tag="SARI_00429"
+ /note="Hexamer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:132885"
+ misc_feature 436061..436063
+ /locus_tag="SARI_00429"
+ /note="Hexagonal pore residue; other site"
+ /db_xref="CDD:132885"
+ gene 436498..437550
+ /locus_tag="SARI_00430"
+ CDS 436498..437550
+ /locus_tag="SARI_00430"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR000005"
+ /inference="protein motif:HMMSmart:IPR000005"
+ /inference="protein motif:ScanRegExp:IPR000005"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:INSD:AAL21348.1"
+ /note="activates the transcription of the ethanolamine
+ utilization operon"
+ /codon_start=1
+ /transl_table=11
+ /product="transcriptional regulator EutR"
+ /protein_id="YP_001569508.1"
+ /db_xref="GI:161502396"
+ /db_xref="InterPro:IPR000005"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /translation="MKKTRTANLHHLYHEALPEDVKLTPRVEVDNVHQRRTTDVYEHA
+ LTITAWQQIYDQLHPGKFHGEFTEILLDDLQVFREYTGLALRQSCVVWPNSFWFGIPA
+ TRGEQGFIGAQGLGSAEIATRPGGTEFELSTPDDYTILGVVISEDVISRQATFLHNPE
+ RVLHMLRNQLALEVKEQHKAALWGFVQQALATFSESPETLHQPAVRKVLSDNLLLAMG
+ TMLEEAKPIHSAESISHQGYRRLLSRAREYVLENMSEPLTVLDLCNQLHVSRRTMQNA
+ FHAILGIGPNAWLKRIRLNAVRRELISPWSQSTTVKDAAMQWGFWHLGQFATDYQQLF
+ AEKPSLTLHQRMRQWA"
+ misc_feature 436498..437544
+ /locus_tag="SARI_00430"
+ /note="transcriptional regulator EutR; Provisional;
+ Region: PRK10130"
+ /db_xref="CDD:182258"
+ misc_feature 437242..437367
+ /locus_tag="SARI_00430"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ misc_feature 437398..437526
+ /locus_tag="SARI_00430"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ gene complement(437664..438563)
+ /locus_tag="SARI_00431"
+ CDS complement(437664..438563)
+ /locus_tag="SARI_00431"
+ /inference="protein motif:HMMPanther:IPR001260"
+ /inference="protein motif:HMMPfam:IPR001260"
+ /inference="protein motif:HMMPIR:IPR001260"
+ /inference="protein motif:ScanRegExp:IPR001260"
+ /inference="similar to AA sequence:REFSEQ:NP_456986.1"
+ /note="catalyzes the conversion of the propionic acid
+ groups of rings I and III to vinyl groups during heme
+ synthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="coproporphyrinogen III oxidase"
+ /protein_id="YP_001569509.1"
+ /db_xref="GI:161502397"
+ /db_xref="InterPro:IPR001260"
+ /translation="MKPDAQHVKQFLLRLQDDICQTLSAVDGANFIEDSWRREAGGGG
+ RSRVLRNGGIFEQAGVNFSHVNGDAMPASATAHRPELVGRSFEAMGVSLVVHPRNPYI
+ PTSHANVRFFIAEKPGADPVWWFGGGFDLTPYYGFEEDAVHWHRTARDLCQPFGEDVY
+ PRYKKWCDDYFFIKHRNEQRGIGGLFFDDLNTPDFASCFAFMQAVGKGYTEAYLPIVE
+ RRKTMAWGERERSFQLYRRGRYVEFNLVWDRGTLFGLQTGGRTESILMSMPPLVRWEY
+ DYQPKEGSPEAALSEFIQVRDWV"
+ misc_feature complement(437667..438563)
+ /locus_tag="SARI_00431"
+ /note="coproporphyrinogen III oxidase; Provisional;
+ Region: PRK05330"
+ /db_xref="CDD:235413"
+ misc_feature complement(437667..438548)
+ /locus_tag="SARI_00431"
+ /note="Coproporphyrinogen III oxidase; Region:
+ Coprogen_oxidas; pfam01218"
+ /db_xref="CDD:216370"
+ gene complement(438566..439435)
+ /locus_tag="SARI_00432"
+ CDS complement(438566..439435)
+ /locus_tag="SARI_00432"
+ /inference="protein motif:HMMPfam:IPR002508"
+ /inference="protein motif:HMMSmart:IPR002508"
+ /inference="similar to AA sequence:INSD:CAD07681.1"
+ /note="'KEGG: sty:STY2687 1.0e-147 amiA; probable
+ N-acetylmuramoyl-L-alanine amidase K01448;
+ COG: COG0860 N-acetylmuramoyl-L-alanine amidase;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="N-acetylmuramoyl-l-alanine amidase I"
+ /protein_id="YP_001569510.1"
+ /db_xref="GI:161502398"
+ /db_xref="InterPro:IPR002508"
+ /translation="MSNFKLLKTLTSRRQVLKTGLAALTLSGMSHALAKEDTLKTSNG
+ HSKPKTKKTGNKRLVMLDPGHGGIDTGAIGRNGSQEKHVVLAIAKNVRAILRNHGIDA
+ RLTRTGDTFIPLYDRVEIAHKHGADLFMSIHADGFTNPKAAGASVFALSNRGASSAMA
+ KYLSERENRADEVAGKKATDRDHLLQQVLFDLVQTDTIKNSLTLGSHIIKKIKPIHKL
+ HSRTTEQAAFVVLKSPSIPSVLVETSFITNPEEERLLGTTAFRQKIATAIANGIISYF
+ HWFDNQKAHTKKR"
+ misc_feature complement(438575..439435)
+ /locus_tag="SARI_00432"
+ /note="N-acetylmuramoyl-l-alanine amidase I; Provisional;
+ Region: PRK10319"
+ /db_xref="CDD:182376"
+ misc_feature complement(438617..439261)
+ /locus_tag="SARI_00432"
+ /note="N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA
+ (also known as peptidoglycan aminohydrolase, NAMLA
+ amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC
+ 3.5.1.28) is an autolysin that hydrolyzes the amide bond
+ between N-acetylmuramoyl and L-amino...; Region:
+ MurNAc-LAA; cd02696"
+ /db_xref="CDD:119407"
+ misc_feature complement(order(438710..438712,439037..439039,
+ 439196..439198,439241..439243))
+ /locus_tag="SARI_00432"
+ /note="active site"
+ /db_xref="CDD:119407"
+ misc_feature complement(order(439037..439039,439196..439198,
+ 439241..439243))
+ /locus_tag="SARI_00432"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:119407"
+ gene 439648..440073
+ /locus_tag="SARI_00433"
+ CDS 439648..440073
+ /locus_tag="SARI_00433"
+ /inference="protein motif:HMMPfam:IPR000182"
+ /inference="similar to AA sequence:SwissProt:P63423"
+ /note="'KEGG: eci:UTI89_C2767 4.7e-70 ypeA; hypothetical
+ protein YpeA K00680;
+ COG: COG0456 Acetyltransferases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative acetyltransferase"
+ /protein_id="YP_001569511.1"
+ /db_xref="GI:161502399"
+ /db_xref="InterPro:IPR000182"
+ /translation="MEIRVFRQEDFEEVITLWERCDLLRPWNDPEMDIERKVNHDVSL
+ FLVAEVSGEVVGTVMGGYDGHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPK
+ IQIMVRDDNDVVLGMYERLGYEHSDALSLGKRLIEDEEY"
+ misc_feature 439648..440061
+ /locus_tag="SARI_00433"
+ /note="putative acetyltransferase; Provisional; Region:
+ PRK03624"
+ /db_xref="CDD:235142"
+ misc_feature 439780..439962
+ /locus_tag="SARI_00433"
+ /note="N-Acyltransferase superfamily: Various enzymes that
+ characteristically catalyze the transfer of an acyl group
+ to a substrate; Region: NAT_SF; cd04301"
+ /db_xref="CDD:173926"
+ misc_feature order(439861..439869,439897..439902)
+ /locus_tag="SARI_00433"
+ /note="Coenzyme A binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:173926"
+ gene 440060..440509
+ /locus_tag="SARI_00434"
+ CDS 440060..440509
+ /locus_tag="SARI_00434"
+ /inference="similar to AA sequence:REFSEQ:YP_217434.1"
+ /note="'COG: NOG08687 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569512.1"
+ /db_xref="GI:161502400"
+ /translation="MKSTEFHPADYDVHGRLRLPFLFWCVLLLQARAWILFVIAGSSR
+ EQGNTLLNFFYPDHDNFWLGLLPGVPAVVAFLLSGRREAFPGMWRMLRGWLILAQLVL
+ LCWQPALWLSGESVNGAGMALFVVDIVALIWLVTHRRCRACFVSGKE"
+ misc_feature 440075..440491
+ /locus_tag="SARI_00434"
+ /note="Protein of unknown function (DUF2919); Region:
+ DUF2919; pfam11143"
+ /db_xref="CDD:151587"
+ gene 440570..441145
+ /locus_tag="SARI_00435"
+ CDS 440570..441145
+ /locus_tag="SARI_00435"
+ /inference="protein motif:HMMPfam:IPR010938"
+ /inference="similar to AA sequence:REFSEQ:YP_149742.1"
+ /note="'COG: NOG06776 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569513.1"
+ /db_xref="GI:161502401"
+ /db_xref="InterPro:IPR010938"
+ /translation="MKSLRLTLLALPLALTGCSTLSSVNWSAANPWNWFGSSTKVTEQ
+ GVGDLTAATPLEKQAIAEALDGDYRLRSGMKTDNGNVVRFFEAMKGDNVAMVINGEQG
+ TVSRIDVLDSDIPSAAGVKIGTPFSDLYSKAFGHCESASSDSHTNVECKAEGSQHISY
+ VFSGEWSGPEGLMPSDDALKNWVVRKIIWRR"
+ misc_feature 440570..441142
+ /locus_tag="SARI_00435"
+ /note="RpoE-regulated lipoprotein; Provisional; Region:
+ PRK10718"
+ /db_xref="CDD:236742"
+ misc_feature 440633..441142
+ /locus_tag="SARI_00435"
+ /note="Protein of unknown function (DUF1131); Region:
+ DUF1131; pfam06572"
+ /db_xref="CDD:191558"
+ gene 441240..442136
+ /locus_tag="SARI_00436"
+ CDS 441240..442136
+ /locus_tag="SARI_00436"
+ /inference="protein motif:HMMPfam:IPR006314"
+ /inference="protein motif:HMMTigr:IPR006314"
+ /inference="similar to AA sequence:REFSEQ:NP_804281.1"
+ /note="'KEGG: reh:H16_B0946 1.3e-42 predicted
+ iron-dependent peroxidase K00430;
+ COG: COG2837 Predicted iron-dependent peroxidase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569514.1"
+ /db_xref="GI:161502402"
+ /db_xref="InterPro:IPR006314"
+ /translation="MSQVQSGILPEHCRAAIWIEANVKGDVDALRAASRTFADKLATF
+ EVKFPDANLGAVVAFGNNTWRALSGVGAEELKDFIPYGKGLAPATQYDVLIHILSLRH
+ DVNFSVAQAAMEAFGDCIDVKEEVHGFRWVEERDLSGFVDGTENPAGEETRREVAVIK
+ DGVDAGGSYVFVQRWEHNLKQLNRMSIHDQEMMIGRTKEANEEIDGDSRPATSHLSRV
+ DLKEEGKGLKIVRQSLPYGTASGTHGLYFCAYCARLHNIEQQLLSMFGDTDGKRDAML
+ RFTKPVTGGYYFAPSLDRLLAL"
+ misc_feature 441252..442124
+ /locus_tag="SARI_00436"
+ /note="Dyp-type peroxidase family; Region: Dyp_perox;
+ pfam04261"
+ /db_xref="CDD:217993"
+ gene complement(442193..443491)
+ /locus_tag="SARI_00437"
+ CDS complement(442193..443491)
+ /locus_tag="SARI_00437"
+ /inference="protein motif:HMMPfam:IPR001466"
+ /inference="protein motif:superfamily:IPR012338"
+ /inference="similar to AA sequence:REFSEQ:ZP_00700450.1"
+ /note="'KEGG: oih:OB0667 1.5e-50 beta-lactamase K01467;
+ COG: COG1680 Beta-lactamase class C and other penicillin
+ binding proteins;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569515.1"
+ /db_xref="GI:161502403"
+ /db_xref="InterPro:IPR001466"
+ /db_xref="InterPro:IPR012338"
+ /translation="MNIKLLFASLLAFSCAASATSYPVLTESTPEKVGLNIERLNRLE
+ SWIAQQVDAGYPSVNLLIIKDNHIVYRKAWGDAKKYDGNTLMRQPIKATTETLYDLAS
+ NSKMYATNFALQKLMSEGKLKPDDLISKYIPGFVDRPGEAIKGKSMLRVADLLHHSGG
+ FPADPQYPNKTVAGELYSQDKSTTLEMIKRTPLEYRPGTQHIYSDVDYMLLGFIVEAV
+ TGQPLDRYVEEAIYRPLGLTHTVFNPLKKGFQPQQIAATELNGNTRDGIIHFPNIRTT
+ TVWGQVHDEKAFYSMGGVSGHAGLFSNTADIAVLMQTMLNGGSYGNVTLFSPETVKMF
+ TRRSPEDATFGLGWRVNGNASMTSTFGTLASAEAYGHTGWTGTLTVIDPVNHMAIVML
+ SNKPHSPVADPQKNPNMFKSGLMPVATYGWVVDQIYAALK"
+ misc_feature complement(442196..443428)
+ /locus_tag="SARI_00437"
+ /note="putative periplasmic esterase; Provisional; Region:
+ PRK03642"
+ /db_xref="CDD:179620"
+ misc_feature complement(442217..443410)
+ /locus_tag="SARI_00437"
+ /note="Beta-lactamase class C and other penicillin binding
+ proteins [Defense mechanisms]; Region: AmpC; COG1680"
+ /db_xref="CDD:224594"
+ gene complement(443496..444926)
+ /gene="murP"
+ /locus_tag="SARI_00438"
+ CDS complement(443496..444926)
+ /gene="murP"
+ /locus_tag="SARI_00438"
+ /inference="protein motif:HMMPfam:IPR001996"
+ /inference="protein motif:HMMPfam:IPR003352"
+ /inference="protein motif:ScanRegExp:IPR001996"
+ /inference="similar to AA sequence:REFSEQ:YP_670341.1"
+ /note="belongs to PEP-dependent PTS system; contains the
+ PTS EIIBC domains; involved in uptake of exogenous
+ N-acetylmuramic acid (MurNAc); requires crr-encoded enzyme
+ IIA-glucose component"
+ /codon_start=1
+ /transl_table=11
+ /product="PTS system N-acetylmuramic acid transporter
+ subunits EIIBC"
+ /protein_id="YP_001569516.1"
+ /db_xref="GI:161502404"
+ /db_xref="InterPro:IPR001996"
+ /db_xref="InterPro:IPR003352"
+ /translation="MAKEISNDLLKAILARVGGPANIATCGNCMTRLRLSVHDSTQVD
+ PAIRTLEGVKGVVLSDNQVQVIFGPGKAQRAADAMNALLANSGETLMQAADIAAKTKS
+ QLKAKQTSGVQQFLSKFATIFTPLIPGFIAAGLLLGIATLIGTVMHLPADAQGMLADA
+ LNLMKVFSKGLFTFLVILIGYNAAQAFGGTGVNGAIIASLFLLGYNPAATTGYFSGIQ
+ DFFGLPIDPRGNIIGVLIAAWASARIECIIRRFMPDDLDMLLTSMLTLLVTAALAYLI
+ IMPLGGWLFEGMSWLFIHLNSNPLGCAVLAGLFLVSVVFGVHQGFIPVYLALMSSQGF
+ NSLFPILSMAGAGQVGAALALYWRAERHSALRSQVRGAIIPGLLGVGEPLIYGVTLPR
+ MKPFITACLGGAAGGLFIGLVAWSGLPMGLNSAFGPSGLVALPLMTSAQGILPAMAVY
+ AAGMAISYLGGFIFTVLFGCRNVNLD"
+ misc_feature complement(443499..444923)
+ /gene="murP"
+ /locus_tag="SARI_00438"
+ /note="PTS system N-acetylmuramic acid transporter
+ subunits EIIBC; Reviewed; Region: murP; PRK09586"
+ /db_xref="CDD:181971"
+ misc_feature complement(444678..444908)
+ /gene="murP"
+ /locus_tag="SARI_00438"
+ /note="PTS_IIB, PTS system, glucose/sucrose specific IIB
+ subunit. The bacterial phosphoenolpyruvate: sugar
+ phosphotransferase system (PTS) is a multi-protein system
+ involved in the regulation of a variety of metabolic and
+ transcriptional processes. This family...; Region:
+ PTS_IIB_glc; cd00212"
+ /db_xref="CDD:238130"
+ misc_feature complement(444825..444845)
+ /gene="murP"
+ /locus_tag="SARI_00438"
+ /note="active site turn [active]"
+ /db_xref="CDD:238130"
+ misc_feature complement(444840..444842)
+ /gene="murP"
+ /locus_tag="SARI_00438"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238130"
+ misc_feature complement(443499..444614)
+ /gene="murP"
+ /locus_tag="SARI_00438"
+ /note="Phosphotransferase system IIC components,
+ glucose/maltose/N-acetylglucosamine-specific [Carbohydrate
+ transport and metabolism]; Region: PtsG; COG1263"
+ /db_xref="CDD:224183"
+ gene complement(444932..445828)
+ /gene="murQ"
+ /locus_tag="SARI_00439"
+ CDS complement(444932..445828)
+ /gene="murQ"
+ /locus_tag="SARI_00439"
+ /inference="protein motif:HMMPfam:IPR001347"
+ /inference="protein motif:HMMTigr:IPR005488"
+ /inference="protein motif:ScanRegExp:IPR005486"
+ /inference="similar to AA sequence:REFSEQ:NP_311326.1"
+ /note="catalyzes the cleavage of the lactyl ether moiety
+ of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form
+ N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate;
+ involved in MurNAc dissimilation pathway"
+ /codon_start=1
+ /transl_table=11
+ /product="N-acetylmuramic acid-6-phosphate etherase"
+ /protein_id="YP_001569517.1"
+ /db_xref="GI:161502405"
+ /db_xref="InterPro:IPR001347"
+ /db_xref="InterPro:IPR005486"
+ /db_xref="InterPro:IPR005488"
+ /translation="MQLENLMTESVNRASLEIDRVSTLDMCRIINNEDKTVPLAVEKV
+ LPAIATAIDVIYAQVSAGGRMIYIGAGTSGRLGILDASECPPTYGVSPGLVIGLIAGG
+ EQAIQHAIEGAEDDGEGGETDLQHIALSENDVVIGIAASGRTPYVIAGLEYARSLGCR
+ TVGISCNPGSAVANAAEIAITPVVGPEVVSGSSRMKAGTAQKLILNMLSTGLMIKSGK
+ VFGNLMVDVVATNEKLHLRQITIVKNATGCTRQEAEAALSACGRHCKTAIVMLLKNLN
+ AAEASLRLEQHGGFIRQVLEKE"
+ misc_feature complement(444938..445828)
+ /gene="murQ"
+ /locus_tag="SARI_00439"
+ /note="N-acetylmuramic acid-6-phosphate etherase;
+ Reviewed; Region: murQ; PRK05441"
+ /db_xref="CDD:235467"
+ misc_feature complement(445019..445789)
+ /gene="murQ"
+ /locus_tag="SARI_00439"
+ /note="N-acetylmuramic acid 6-phosphate etherase. Members
+ of this family contain the SIS (Sugar ISomerase) domain.
+ The SIS domain is found in many phosphosugar isomerases
+ and phosphosugar binding proteins. The bacterial cell wall
+ sugar N-acetylmuramic acid...; Region: SIS_Etherase;
+ cd05007"
+ /db_xref="CDD:240140"
+ misc_feature complement(order(445412..445414,445610..445612))
+ /gene="murQ"
+ /locus_tag="SARI_00439"
+ /note="putative active site [active]"
+ /db_xref="CDD:240140"
+ gene complement(445842..446432)
+ /locus_tag="SARI_00440"
+ CDS complement(445842..446432)
+ /locus_tag="SARI_00440"
+ /inference="similar to AA sequence:REFSEQ:YP_854939.1"
+ /note="'Psort location: extracellular, including cell
+ wall, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569518.1"
+ /db_xref="GI:161502406"
+ /translation="MNNSFIPAAALLFCSQALAAPHLFIGDNVNVLAARSAKVSIFSK
+ DVVLPDGVQKMVVKFDSPVNPESVNNNRGRVTSNPYILSFNASGNVDIQLSAGKPLDE
+ KEASQMAQKPAFTLIAGGKPVPFDIKMLDRDSITVFTDLSAIVNEDSVMIPSPARSTA
+ PATAPLAHNELSKLQQLYLKADDTQKKAFLKWALNL"
+ misc_feature complement(445857..446369)
+ /locus_tag="SARI_00440"
+ /note="Uncharacterized protein conserved in bacteria
+ (DUF2057); Region: DUF2057; pfam09829"
+ /db_xref="CDD:220430"
+ gene complement(446458..447543)
+ /locus_tag="SARI_00441"
+ CDS complement(446458..447543)
+ /locus_tag="SARI_00441"
+ /inference="protein motif:HMMPfam:IPR001702"
+ /inference="similar to AA sequence:REFSEQ:YP_854940.1"
+ /note="'COG: COG3203 Outer membrane protein (porin);
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569519.1"
+ /db_xref="GI:161502407"
+ /db_xref="InterPro:IPR001702"
+ /translation="MKLTLKSLATLTLLATSASHAAVIYQANDGSNIDLYGRLGFNIS
+ DKKTGDTSGDFDARIGFSARQAINDKLAVIGFTQYQVNAAEYANNISAEDPDDFTARY
+ VWAGIDFSEYGKLTGGRVSSGLIMFTDIGDVFASSDVAMARQANFVDPTAVQVFRQDG
+ TIQYQNTFGNLDFSTAYILGNNTSDLDYGYNAALRYTLDMGEFGRLQPVIAGQTEKAS
+ HDKTSAQSDDNADKYTFYGIGTRYYLGDVMLGLLVAQDKVSYLDGSPDSTDTDYEATL
+ VWNVSPDWALRTGYRHLKNEDGDGLKLRDTTFEAQYKLTVRSSVFASYSWRNGEKGTK
+ RTNGSDVSFGGSNPADDYFHLGLRYEF"
+ misc_feature complement(446461..447486)
+ /locus_tag="SARI_00441"
+ /note="Outer membrane protein (porin) [Cell envelope
+ biogenesis, outer membrane]; Region: OmpC; COG3203"
+ /db_xref="CDD:225744"
+ misc_feature complement(446461..447453)
+ /locus_tag="SARI_00441"
+ /note="Porins form aqueous channels for the diffusion of
+ small hydrophillic molecules across the outer membrane.
+ Individual 16-strand anti-parallel beta-barrels form a
+ central pore, and trimerizes thru mainly hydrophobic
+ interactions at the interface. Trimers...; Region:
+ gram_neg_porins; cd00342"
+ /db_xref="CDD:238208"
+ misc_feature complement(order(446461..446463,446467..446469,
+ 446473..446475,446590..446592,446599..446604,
+ 447064..447069,447073..447075,447187..447195,
+ 447223..447237,447241..447246,447280..447282,
+ 447295..447303,447307..447309,447313..447321,
+ 447325..447327,447343..447357,447415..447423,
+ 447427..447429,447445..447447,447451..447453))
+ /locus_tag="SARI_00441"
+ /note="trimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238208"
+ misc_feature complement(order(447073..447075,447148..447150,
+ 447241..447243,447370..447372,447430..447432))
+ /locus_tag="SARI_00441"
+ /note="eyelet of channel; other site"
+ /db_xref="CDD:238208"
+ gene 447746..448609
+ /locus_tag="SARI_00442"
+ CDS 447746..448609
+ /locus_tag="SARI_00442"
+ /inference="protein motif:HMMPfam:IPR000281"
+ /inference="protein motif:HMMPfam:IPR001347"
+ /inference="similar to AA sequence:REFSEQ:ZP_00737907.1"
+ /note="'KEGG: bam:Bamb_0825 3.2e-22 glucokinase K00845;
+ COG: COG1737 Transcriptional regulators;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569520.1"
+ /db_xref="GI:161502408"
+ /db_xref="InterPro:IPR000281"
+ /db_xref="InterPro:IPR001347"
+ /translation="MLYLAKMRNAEGEFTENEQKIATFLLAHVGELKTVSSRNMAKQL
+ EISQSSIVKFAQKLGANGFTELRMALIEEHSVSREKKRDKAVHLHSSITSEDSLEMMA
+ RKLNREKIVALEETYNLMDYERLEQVINLISKAPLIQITGVGGSALVGRDLSFKLMKI
+ GFRVACEVDTHVQATIAQALRQGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSL
+ ADSPLRRLADYTLDTVSGETEWRSSSMSTRTAQNSVTDLLFVGMVQLNDVESLRMIER
+ SSELITLLDRS"
+ misc_feature 447746..448600
+ /locus_tag="SARI_00442"
+ /note="transcriptional regulator MurR; Provisional;
+ Region: PRK15482"
+ /db_xref="CDD:185379"
+ misc_feature 447746..447970
+ /locus_tag="SARI_00442"
+ /note="Helix-turn-helix domain, rpiR family; Region:
+ HTH_6; pfam01418"
+ /db_xref="CDD:201784"
+ misc_feature 448112..448528
+ /locus_tag="SARI_00442"
+ /note="RpiR-like protein. RpiR contains a SIS (Sugar
+ ISomerase) domain, which is found in many phosphosugar
+ isomerases and phosphosugar binding proteins. In E. coli,
+ rpiR negatively regulates the expression of rpiB gene.
+ Both rpiB and rpiA are ribose phosphate...; Region:
+ SIS_RpiR; cd05013"
+ /db_xref="CDD:240144"
+ misc_feature order(448181..448183,448313..448315)
+ /locus_tag="SARI_00442"
+ /note="putative active site [active]"
+ /db_xref="CDD:240144"
+ gene 448727..449518
+ /locus_tag="SARI_00443"
+ CDS 448727..449518
+ /locus_tag="SARI_00443"
+ /inference="protein motif:HMMPanther:IPR002347"
+ /inference="protein motif:HMMPfam:IPR002198"
+ /inference="similar to AA sequence:INSD:AAO68131.1"
+ /note="'KEGG: stm:STM2445 6.1e-132 ucpA; putative
+ oxidoreductase;
+ COG: COG1028 Dehydrogenases with different specificities
+ (related to short-chain alcohol dehydrogenases);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="short chain dehydrogenase"
+ /protein_id="YP_001569521.1"
+ /db_xref="GI:161502409"
+ /db_xref="InterPro:IPR002198"
+ /db_xref="InterPro:IPR002347"
+ /translation="MGKLTGKTALVTGASQGIGEGIVRVFARHGANLILLDISDEIEK
+ LADELGGRGHRCTAVKADVRDFASVQAAVARAKEIEGRIDILVNNAGVCRLGNFLDMS
+ EEDRDFHIDINIKGVWNVTKAVLPEMIKRKDGRIVMMSSVTGDIVADPGETAYALSKA
+ AIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPL
+ RRLADPLEVGELAAFLASDESSYLTGTQNVIDGGSTLPESVSVGV"
+ misc_feature 448727..449515
+ /locus_tag="SARI_00443"
+ /note="short chain dehydrogenase; Provisional; Region:
+ PRK08226"
+ /db_xref="CDD:181305"
+ misc_feature 448739..449491
+ /locus_tag="SARI_00443"
+ /note="human DHRS6-like, classical (c) SDRs; Region:
+ DHRS6_like_SDR_c; cd05368"
+ /db_xref="CDD:187626"
+ misc_feature order(448763..448765,448769..448780,448835..448843,
+ 448907..448915,448991..448999,449060..449062,
+ 449141..449146,449189..449191,449201..449203,
+ 449279..449290,449294..449302,449312..449314)
+ /locus_tag="SARI_00443"
+ /note="NAD binding site [chemical binding]; other site"
+ /db_xref="CDD:187626"
+ misc_feature order(448922..448924,449015..449023,449027..449035,
+ 449042..449047,449054..449056,449066..449071,
+ 449078..449080,449087..449092,449099..449104,
+ 449111..449113,449156..449158,449162..449170,
+ 449174..449179,449183..449185,449192..449197,
+ 449204..449209,449213..449221,449225..449230,
+ 449234..449248,449285..449287,449375..449380,
+ 449384..449392,449402..449404,449414..449416,
+ 449423..449425,449447..449455,449459..449461,
+ 449468..449482,449489..449491)
+ /locus_tag="SARI_00443"
+ /note="homotetramer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:187626"
+ misc_feature order(448922..448924,449015..449023,449027..449035,
+ 449042..449047,449054..449056,449066..449071,
+ 449078..449080,449087..449092,449099..449104,
+ 449111..449113,449156..449158,449162..449164,
+ 449168..449170,449174..449179,449183..449185,
+ 449192..449197,449204..449209,449213..449221,
+ 449225..449230,449237..449245)
+ /locus_tag="SARI_00443"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:187626"
+ misc_feature order(449063..449065,449147..449149,449189..449191,
+ 449201..449203)
+ /locus_tag="SARI_00443"
+ /note="active site"
+ /db_xref="CDD:187626"
+ gene 449675..450691
+ /locus_tag="SARI_00444"
+ CDS 449675..450691
+ /locus_tag="SARI_00444"
+ /inference="protein motif:HMMPfam:IPR006059"
+ /inference="protein motif:HMMTigr:IPR005669"
+ /inference="protein motif:ScanRegExp:IPR000957"
+ /inference="protein motif:ScanRegExp:IPR002052"
+ /inference="similar to AA sequence:REFSEQ:YP_217430.1"
+ /note="'COG: COG4150 ABC-type sulfate transport system,
+ periplasmic component;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="thiosulfate transporter subunit"
+ /protein_id="YP_001569522.1"
+ /db_xref="GI:161502410"
+ /db_xref="InterPro:IPR000957"
+ /db_xref="InterPro:IPR002052"
+ /db_xref="InterPro:IPR005669"
+ /db_xref="InterPro:IPR006059"
+ /translation="MAVNFLKKSYLMLAASLLMVGQAQALALLNSSYDVSRELFAALN
+ PPFEQQWEKDNGGDKLTIKQSHAGSSKQALAILQGLKADVVTYNQVTDVQILHDKGKL
+ LPAGWQRRLPNNSSPFYSTMGFLVRKGNPKNIHDWNDLVRPDVKLIFPNPKTSGNARY
+ TYLAAWGAADNADGGDKAKTEQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFE
+ SEVNNIRKQYEAQGFEVVIPKTNILAEFPVAWVDKNVKANGTEKAAKAYLNYLYTPQA
+ QTIITDYYYRVNNPEVMSKQTDKFPQTELFRVEEKFGSWPEVMKTHFASGGELDKLLA
+ AGRK"
+ misc_feature 449675..450688
+ /locus_tag="SARI_00444"
+ /note="thiosulfate transporter subunit; Provisional;
+ Region: PRK10852"
+ /db_xref="CDD:236775"
+ misc_feature 449783..450532
+ /locus_tag="SARI_00444"
+ /note="Bacterial extracellular solute-binding protein;
+ Region: SBP_bac_11; pfam13531"
+ /db_xref="CDD:222203"
+ gene 450691..451524
+ /locus_tag="SARI_00445"
+ CDS 450691..451524
+ /locus_tag="SARI_00445"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="protein motif:HMMTigr:IPR005667"
+ /inference="protein motif:HMMTigr:IPR011865"
+ /inference="similar to AA sequence:SwissProt:P41032"
+ /note="'KEGG: syn:sll0739 1.3e-29 modBC; ABC-type
+ molybdate transport system permease/ATP-binding protein
+ K02018;
+ COG: COG0555 ABC-type sulfate transport system, permease
+ component;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="sulfate/thiosulfate transporter subunit"
+ /protein_id="YP_001569523.1"
+ /db_xref="GI:161502411"
+ /db_xref="InterPro:IPR000515"
+ /db_xref="InterPro:IPR005667"
+ /db_xref="InterPro:IPR011865"
+ /translation="MLAMSSRRVLPGFTLSLGTSLLFVCLILLLPLSALVMQLSQMSW
+ AQYWDVVTNPQVVAAYKVTLLAAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDL
+ PFALPTAVAGLTLASLFSVNGFYGQFLAQFDIKVTYTWLGIAVAMAFTSIPFVVRTVQ
+ PVLEELGPEYEEAAQTLGATRLQSFRKVVLPELSPALVAGIALSFTRSLGEFGAVIFI
+ AGNIAWKTEVTSLMIFVRLQEFDYPAASAIASVILAASLLLLFSINTLQSRFGRRVVG
+ H"
+ misc_feature 450697..451509
+ /locus_tag="SARI_00445"
+ /note="ABC-type sulfate transport system, permease
+ component [Posttranslational modification, protein
+ turnover, chaperones]; Region: CysU; COG0555"
+ /db_xref="CDD:223629"
+ misc_feature 450874..451416
+ /locus_tag="SARI_00445"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature order(450916..450921,450928..450933,450946..450948,
+ 450976..450987,450991..451020,451027..451032,
+ 451036..451038,451132..451137,451144..451146,
+ 451150..451152,451159..451164,451168..451170,
+ 451180..451185,451192..451194,451243..451245,
+ 451285..451290,451297..451299,451318..451329,
+ 451336..451341,451378..451383,451411..451416)
+ /locus_tag="SARI_00445"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(450994..451038,451318..451335)
+ /locus_tag="SARI_00445"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(451036..451038,451117..451119,451336..451338,
+ 451372..451374,451381..451383,451411..451413)
+ /locus_tag="SARI_00445"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(451195..451233,451249..451254,451264..451266)
+ /locus_tag="SARI_00445"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene 451524..452399
+ /gene="cysW"
+ /locus_tag="SARI_00446"
+ CDS 451524..452399
+ /gene="cysW"
+ /locus_tag="SARI_00446"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="protein motif:HMMTigr:IPR005667"
+ /inference="protein motif:HMMTigr:IPR011866"
+ /inference="similar to AA sequence:REFSEQ:YP_149747.1"
+ /note="Part of the ABC transporter complex cysAWTP
+ involved in sulfate/thiosulfate import"
+ /codon_start=1
+ /transl_table=11
+ /product="sulfate/thiosulfate transporter permease
+ subunit"
+ /protein_id="YP_001569524.1"
+ /db_xref="GI:161502412"
+ /db_xref="InterPro:IPR000515"
+ /db_xref="InterPro:IPR005667"
+ /db_xref="InterPro:IPR011866"
+ /translation="MAEVTQLTRYDAPRINWGKWFLIIIGMLVSAFILLVPMIYIFVQ
+ AFSKGLMPVLQNLADPDMLRAIWLTVLIALIAVPVNLVFGILLAWLVTRFNFPGRQLL
+ LTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHNLQIMFSWPGMVLVTIFVTCPF
+ VVRELVPVMLSQGSQEDEGAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEF
+ GAVSVVSGSIRGETLSLPLQIELLEQDYNTVGSFTAAALLTLMAIITLFLKSMLQWRL
+ EHQEKRAQQEENHEH"
+ misc_feature 451563..452258
+ /gene="cysW"
+ /locus_tag="SARI_00446"
+ /note="sulfate transport protein; Provisional; Region:
+ cysT; CHL00187"
+ /db_xref="CDD:214388"
+ misc_feature 451719..452264
+ /gene="cysW"
+ /locus_tag="SARI_00446"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature order(451767..451772,451779..451784,451797..451799,
+ 451827..451838,451842..451871,451878..451883,
+ 451887..451889,451983..451988,451992..451994,
+ 452001..452003,452010..452015,452019..452021,
+ 452031..452036,452043..452045,452094..452096,
+ 452136..452141,452148..452150,452169..452180,
+ 452187..452192,452229..452234,452262..452264)
+ /gene="cysW"
+ /locus_tag="SARI_00446"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(451845..451889,452169..452186)
+ /gene="cysW"
+ /locus_tag="SARI_00446"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(451887..451889,451968..451970,452187..452189,
+ 452223..452225,452232..452234,452262..452264)
+ /gene="cysW"
+ /locus_tag="SARI_00446"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(452046..452084,452100..452105,452115..452117)
+ /gene="cysW"
+ /locus_tag="SARI_00446"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene 452389..453483
+ /locus_tag="SARI_00447"
+ CDS 452389..453483
+ /locus_tag="SARI_00447"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR005666"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="protein motif:superfamily:IPR008995"
+ /inference="similar to AA sequence:REFSEQ:NP_456976.1"
+ /note="'KEGG: stt:t0417 2.0e-188 cysA; sulphate transport
+ ATP-binding protein CysA K02045;
+ COG: COG1118 ABC-type sulfate/molybdate transport systems,
+ ATPase component;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="sulfate/thiosulfate transporter subunit"
+ /protein_id="YP_001569525.1"
+ /db_xref="GI:161502413"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR005666"
+ /db_xref="InterPro:IPR008995"
+ /translation="MSIEIARIKKSFGRTLVLNDISLDIPSGQMVALLGPSGSGKTTL
+ LRIIAGLEHQSSGHIRFHGTDVSRLHARERKVGFVFQHYALFRHMTVFDNIAFGLTVL
+ PRRERPNAAAIKTKVTQLLEMVQLAHLADRFPAQLSGGQKQRVALARALAVEPQILLL
+ DEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEATEVADRVVVMSQGNIEQA
+ DAPDRVWREPATRFVLEFMGEVNRLQGTIRGGQFHVGAHRWPLGYTPAYQGPVDLFLR
+ PWEVDISRRTSLDSPLPVQVIEASPKGHYTQLVVQPQGWYHDPLTVVMAGDDAPQRGE
+ RLFVGLQHARLYHGDERIEPYEALALAQSA"
+ misc_feature 452389..453444
+ /locus_tag="SARI_00447"
+ /note="sulfate/thiosulfate transporter subunit;
+ Provisional; Region: PRK10851"
+ /db_xref="CDD:182778"
+ misc_feature 452389..453105
+ /locus_tag="SARI_00447"
+ /note="ATP-binding cassette domain of the sulfate
+ transporter; Region: ABC_CysA_sulfate_importer; cd03296"
+ /db_xref="CDD:213263"
+ misc_feature 452491..452514
+ /locus_tag="SARI_00447"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213263"
+ misc_feature order(452500..452505,452509..452517,452629..452631,
+ 452869..452874,452971..452973)
+ /locus_tag="SARI_00447"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213263"
+ misc_feature 452620..452631
+ /locus_tag="SARI_00447"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213263"
+ misc_feature 452797..452826
+ /locus_tag="SARI_00447"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213263"
+ misc_feature 452857..452874
+ /locus_tag="SARI_00447"
+ /note="Walker B; other site"
+ /db_xref="CDD:213263"
+ misc_feature 452881..452892
+ /locus_tag="SARI_00447"
+ /note="D-loop; other site"
+ /db_xref="CDD:213263"
+ misc_feature 452959..452979
+ /locus_tag="SARI_00447"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213263"
+ misc_feature 453244..453411
+ /locus_tag="SARI_00447"
+ /note="TOBE-like domain; Region: TOBE_3; pfam12857"
+ /db_xref="CDD:221811"
+ gene 453605..454462
+ /gene="cysM"
+ /locus_tag="SARI_00448"
+ CDS 453605..454462
+ /gene="cysM"
+ /locus_tag="SARI_00448"
+ /inference="protein motif:HMMPfam:IPR001926"
+ /inference="protein motif:HMMTigr:IPR005856"
+ /inference="protein motif:HMMTigr:IPR005858"
+ /inference="protein motif:ScanRegExp:IPR001216"
+ /inference="similar to AA sequence:INSD:AAL21334.1"
+ /note="catalyzes the formation of cysteine from
+ 3-O-acetyl-L-serine and hydrogen sulfide"
+ /codon_start=1
+ /transl_table=11
+ /product="cysteine synthase B"
+ /protein_id="YP_001569526.1"
+ /db_xref="GI:161502414"
+ /db_xref="InterPro:IPR001216"
+ /db_xref="InterPro:IPR001926"
+ /db_xref="InterPro:IPR005856"
+ /db_xref="InterPro:IPR005858"
+ /translation="MTPDNGSEIWVKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPGD
+ VLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRSAMRAYGAELVLVTKEQGME
+ GARDLALSMAERGEGKLLDQFNNPDNPYAHYATTGPEIWRQTAGRITHFVSSMGTTGT
+ ITGVSRFLREQDKAVTIVGLQPEEGSCIPGIRRWPADYMPGIFSAPLVDEVLDIHQQE
+ AENTMRELAVREGIFCGVSSGGAVAGAIRIAKANPGALVVAIICDRGDRYLSTGVFGE
+ EHFSQGAGI"
+ misc_feature 453605..454426
+ /gene="cysM"
+ /locus_tag="SARI_00448"
+ /note="cysteine synthase B; Region: cysM; TIGR01138"
+ /db_xref="CDD:130208"
+ misc_feature 453608..454414
+ /gene="cysM"
+ /locus_tag="SARI_00448"
+ /note="CBS_like: This subgroup includes Cystathionine
+ beta-synthase (CBS) and Cysteine synthase. CBS is a unique
+ heme-containing enzyme that catalyzes a pyridoxal
+ 5'-phosphate (PLP)-dependent condensation of serine
+ and homocysteine to give cystathionine; Region: CBS_like;
+ cd01561"
+ /db_xref="CDD:107204"
+ misc_feature order(453632..453634,453650..453652,453656..453658,
+ 453782..453784,453791..453793,453839..453844,
+ 453851..453856,453863..453868,454028..454033,
+ 454283..454291,454295..454303,454370..454372,
+ 454400..454402,454409..454411)
+ /gene="cysM"
+ /locus_tag="SARI_00448"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:107204"
+ misc_feature order(453671..453673,453761..453763,454067..454084,
+ 454172..454174,454313..454315,454388..454393)
+ /gene="cysM"
+ /locus_tag="SARI_00448"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:107204"
+ misc_feature 453671..453673
+ /gene="cysM"
+ /locus_tag="SARI_00448"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:107204"
+ gene complement(454546..455262)
+ /locus_tag="SARI_00449"
+ CDS complement(454546..455262)
+ /locus_tag="SARI_00449"
+ /inference="protein motif:HMMPfam:IPR000991"
+ /inference="similar to AA sequence:SwissProt:P40194"
+ /note="Catalyzes the transfer of the ammonia group from
+ glutamine to a new carbon-nitrogen group"
+ /codon_start=1
+ /transl_table=11
+ /product="glutamine amidotransferase"
+ /protein_id="YP_001569527.1"
+ /db_xref="GI:161502415"
+ /db_xref="InterPro:IPR000991"
+ /translation="MRIHFVVHESFESTGAYLQWAEDRGYAISWSRVNAGEALPLNAD
+ GFDMLVIFGGPQSPRTTREECPYFDSRAEQHLINQAITARRMVIGICLGSQLIGEALG
+ AAVCQSPEKEIGHYPITLTEAGLRHPFIDHFGSPLTVGHWHNDMPGLTDQATVLAESE
+ GCPRQIVQYGNFIYGFQCHMEFTVEAVEGLIQHSQQELADAQGKRFIRSVAEMRTWNY
+ QEMNRKLWQFLDRLVENHQQ"
+ misc_feature complement(454654..455262)
+ /locus_tag="SARI_00449"
+ /note="GMP synthase - Glutamine amidotransferase domain
+ [Nucleotide transport and metabolism]; Region: GuaA;
+ COG0518"
+ /db_xref="CDD:223592"
+ misc_feature complement(454720..455259)
+ /locus_tag="SARI_00449"
+ /note="Subgroup of proteins having the Type 1 glutamine
+ amidotransferase (GATase1) domain; Region: GATase1_1;
+ cd01741"
+ /db_xref="CDD:153212"
+ misc_feature complement(order(454720..454722,454726..454728,
+ 454990..454992))
+ /locus_tag="SARI_00449"
+ /note="catalytic triad [active]"
+ /db_xref="CDD:153212"
+ gene complement(455277..456569)
+ /locus_tag="SARI_00450"
+ CDS complement(455277..456569)
+ /locus_tag="SARI_00450"
+ /inference="protein motif:Gene3D:IPR000524"
+ /inference="protein motif:HMMPfam:IPR000524"
+ /inference="protein motif:HMMPfam:IPR004839"
+ /inference="protein motif:HMMSmart:IPR000524"
+ /inference="similar to AA sequence:SwissProt:P40193"
+ /note="'KEGG: nwi:Nwi_0881 2.0e-25 transcriptional
+ regulatory protein GntR family K00825;
+ COG: COG1167 Transcriptional regulators containing a
+ DNA-binding HTH domain and an aminotransferase domain
+ (MocR family) and their eukaryotic orthologs;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569528.1"
+ /db_xref="GI:161502416"
+ /db_xref="InterPro:IPR000524"
+ /db_xref="InterPro:IPR004839"
+ /translation="MINGKTASEIFNSIRQHITAGTLRAEDSLPPVRELASELKVNRN
+ TVAAAYKRLITAGLAQSLGRNGTVIKGSPSPVALEGGDPHTPLRDLSGGNPDPQRLPD
+ LSRYFARLSRTPHLYGDAPVSPELHAWAVRWLQDAMPVAGEIDITSGAIDAIERLLCA
+ HLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDSEGMQPEKLEQALSQGARAVILT
+ PRAHNPTGCSLSALRAAALQNILARYPQILVIIDDHFALLSSSPWQPVIAQATQHWAV
+ IRSVSKTLGPDLRLAIIASDSATSAKLRLRLNAGSQWVSHLLQDLVCACLTDPEYQHR
+ LTQTRLFYAAQQQKLACALQQHGIAISPGDGLNAWLPLETHSQATAFALAKSGWLVRE
+ GEAFGVSTSSHGLRITLSTLNDSEINMLAADIHQALNR"
+ misc_feature complement(455280..456569)
+ /locus_tag="SARI_00450"
+ /note="transcriptional regulatory protein PtsJ;
+ Provisional; Region: PRK15481"
+ /db_xref="CDD:185378"
+ misc_feature complement(456360..456545)
+ /locus_tag="SARI_00450"
+ /note="Winged helix-turn-helix (WHTH) DNA-binding domain
+ of the GntR family of transcriptional regulators; Region:
+ WHTH_GntR; cd07377"
+ /db_xref="CDD:153418"
+ misc_feature complement(order(456369..456380,456384..456389,
+ 456417..456419,456426..456431,456435..456449,
+ 456471..456476,456480..456482))
+ /locus_tag="SARI_00450"
+ /note="DNA-binding site [nucleotide binding]; DNA binding
+ site"
+ /db_xref="CDD:153418"
+ misc_feature complement(455292..456305)
+ /locus_tag="SARI_00450"
+ /note="Aspartate aminotransferase family. This family
+ belongs to pyridoxal phosphate (PLP)-dependent aspartate
+ aminotransferase superfamily (fold I). Pyridoxal phosphate
+ combines with an alpha-amino acid to form a compound
+ called a Schiff base or aldimine...; Region: AAT_like;
+ cd00609"
+ /db_xref="CDD:99734"
+ misc_feature complement(order(455703..455705,455724..455729,
+ 455733..455735,455805..455807,455901..455903,
+ 456045..456047,456117..456125))
+ /locus_tag="SARI_00450"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:99734"
+ misc_feature complement(order(455607..455609,455616..455618,
+ 455703..455711,455826..455828,456015..456017,
+ 456114..456116))
+ /locus_tag="SARI_00450"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99734"
+ misc_feature complement(455724..455726)
+ /locus_tag="SARI_00450"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:99734"
+ gene 456652..457518
+ /gene="pdxK"
+ /locus_tag="SARI_00451"
+ CDS 456652..457518
+ /gene="pdxK"
+ /locus_tag="SARI_00451"
+ /inference="protein motif:HMMPfam:IPR011611"
+ /inference="protein motif:HMMTigr:IPR004625"
+ /inference="similar to AA sequence:INSD:AAO68140.1"
+ /note="catalyzes the formation of pyridoxal 5'-phosphate
+ from pyridoxal"
+ /codon_start=1
+ /transl_table=11
+ /product="pyridoxal kinase"
+ /protein_id="YP_001569529.1"
+ /db_xref="GI:161502417"
+ /db_xref="InterPro:IPR004625"
+ /db_xref="InterPro:IPR011611"
+ /translation="MGQESDIQSVLFDDNHRALQTDIVAVQSQVVYGSVGNSIAVPAI
+ KAQGLRVTAVPTVLFSNTPHYKTFYGGILPAEWFAGYLTALNERDALRELKAITTGYM
+ GSADQIVLLSEWLMAVRASHPEVCILVDPVIGDTDSGMYVQAEIPQAYRTHLLPQAQG
+ LTPNVFELEILSGKPCRTQEEAVAAAQSLLSDTLKWVVITSAPGESLETITVAVVTAQ
+ AVEVFDHPRVATELKGTGDLFCAELVCGIVQGKNLTNAARDAAQRVLEVMTWTQRCGC
+ DELILPPAGEAR"
+ misc_feature 456715..457470
+ /gene="pdxK"
+ /locus_tag="SARI_00451"
+ /note="Pyridoxal kinase plays a key role in the synthesis
+ of the active coenzyme pyridoxal-5'-phosphate (PLP),
+ by catalyzing the phosphorylation of the precursor vitamin
+ B6 in the presence of Zn2+ and ATP. Mammals are unable to
+ synthesize PLP de novo and...; Region:
+ pyridoxal_pyridoxamine_kinase; cd01173"
+ /db_xref="CDD:238578"
+ misc_feature order(456715..456717,456736..456738,456742..456747,
+ 456751..456753,456763..456765,456775..456777,
+ 456784..456786,456799..456816,456823..456825,
+ 456832..456834,456859..456864,456868..456870,
+ 456889..456894,456913..456915)
+ /gene="pdxK"
+ /locus_tag="SARI_00451"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238578"
+ misc_feature 456718..457494
+ /gene="pdxK"
+ /locus_tag="SARI_00451"
+ /note="pyridoxamine kinase; Validated; Region: PRK05756"
+ /db_xref="CDD:235592"
+ misc_feature order(456733..456735,456754..456759,456826..456828,
+ 456835..456840,456853..456855,456952..456954,
+ 456958..456960,457348..457353,457360..457362)
+ /gene="pdxK"
+ /locus_tag="SARI_00451"
+ /note="pyridoxal binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:238578"
+ misc_feature order(457039..457041,457054..457056,457135..457137,
+ 457141..457143,457150..457152,457249..457254,
+ 457279..457281,457324..457326,457330..457335,
+ 457354..457362,457366..457368,457441..457443,
+ 457453..457455)
+ /gene="pdxK"
+ /locus_tag="SARI_00451"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238578"
+ gene 457515..457754
+ /locus_tag="SARI_00452"
+ CDS 457515..457754
+ /locus_tag="SARI_00452"
+ /inference="similar to AA sequence:INSD:CAD07666.1"
+ /note="'COG: NOG31214 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569530.1"
+ /db_xref="GI:161502418"
+ /translation="MKSYRLVVRQQGRMVGHFETSGTEALEDICVARAMFGIAGGYDC
+ ELLVADSERRLLESGPEGMKILMREACYRPVTSPL"
+ gene complement(457727..457870)
+ /locus_tag="SARI_00453"
+ CDS complement(457727..457870)
+ /locus_tag="SARI_00453"
+ /note="'Psort location: extracellular, including cell
+ wall, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569531.1"
+ /db_xref="GI:161502419"
+ /translation="MAPIGAIFLSVGLISVAHQAIAGWRRKRLTRPTIFDPTVYNGEV
+ TGR"
+ unsure 457786..457800
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(457889..458398)
+ /locus_tag="SARI_00454"
+ CDS complement(457889..458398)
+ /locus_tag="SARI_00454"
+ /inference="protein motif:BlastProDom:IPR001127"
+ /inference="protein motif:HMMPfam:IPR001127"
+ /inference="protein motif:HMMTigr:IPR001127"
+ /inference="protein motif:ScanRegExp:IPR001127"
+ /inference="protein motif:superfamily:IPR011055"
+ /inference="similar to AA sequence:INSD:AAV76443.1"
+ /note="functions in phosphoenolpyruvate-(PEP)-dependent
+ phosphotransferase (PTS) system; functions in the
+ transport and phosphorylation of glucose"
+ /codon_start=1
+ /transl_table=11
+ /product="PTS system glucose-specific transporter subunit"
+ /protein_id="YP_001569532.1"
+ /db_xref="GI:161502420"
+ /db_xref="InterPro:IPR001127"
+ /db_xref="InterPro:IPR011055"
+ /translation="MGLFDKLKSLVSDDKKDTGTIEIVAPLSGEIVNIEDVPDVVFAE
+ KIVGDGIAIKPTGNKMVAPVDGTIGKIFETNHAFSIESDSGIELFVHFGIDTVELKGE
+ GFKRIAEEGQRVKVGDPVIEFDLPLLEEKAKSTLTPVVISNMDEIKELIKLSGSVTVG
+ ETPVIRIKK"
+ misc_feature complement(457961..458332)
+ /locus_tag="SARI_00454"
+ /note="PTS_IIA, PTS system, glucose/sucrose specific IIA
+ subunit. The bacterial phosphoenolpyruvate: sugar
+ phosphotransferase system (PTS) is a multi-protein system
+ involved in the regulation of a variety of metabolic and
+ transcriptional processes. This family...; Region:
+ PTS_IIA_glc; cd00210"
+ /db_xref="CDD:238128"
+ misc_feature complement(order(457964..457966,457973..457975,
+ 458069..458071,458105..458110,458114..458116,
+ 458126..458128,458132..458140,458156..458164,
+ 458180..458185,458189..458194,458258..458263,
+ 458273..458284))
+ /locus_tag="SARI_00454"
+ /note="HPr interaction site; other site"
+ /db_xref="CDD:238128"
+ misc_feature complement(order(457973..457975,458099..458101,
+ 458105..458110,458114..458116,458126..458128,
+ 458132..458134,458171..458173,458183..458185,
+ 458189..458191,458258..458263,458267..458269,
+ 458273..458278,458282..458284))
+ /locus_tag="SARI_00454"
+ /note="glycerol kinase (GK) interaction site [polypeptide
+ binding]; other site"
+ /db_xref="CDD:238128"
+ misc_feature complement(order(458120..458122,458126..458128,
+ 458171..458173,458177..458179))
+ /locus_tag="SARI_00454"
+ /note="active site"
+ /db_xref="CDD:238128"
+ misc_feature complement(458126..458128)
+ /locus_tag="SARI_00454"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238128"
+ unsure 457914..458167
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(458439..460166)
+ /locus_tag="SARI_00455"
+ CDS complement(458439..460166)
+ /locus_tag="SARI_00455"
+ /inference="protein motif:BlastProDom:IPR000121"
+ /inference="protein motif:HMMPfam:IPR000121"
+ /inference="protein motif:HMMPfam:IPR008279"
+ /inference="protein motif:HMMPfam:IPR008731"
+ /inference="protein motif:HMMTigr:IPR006318"
+ /inference="protein motif:ScanRegExp:IPR000121"
+ /inference="protein motif:ScanRegExp:IPR008279"
+ /inference="protein motif:superfamily:IPR008279"
+ /inference="protein motif:superfamily:IPR008731"
+ /inference="similar to AA sequence:INSD:AAO68143.1"
+ /note="'Phosphotransferase system, enzyme I; transfers the
+ phosphoryl group from phosphoenolpyruvate (PEP) to the
+ phosphoryl carrier protein; part of the
+ phosphoenolpyruvate-dependent sugar phosphotransferase
+ system (PTS), a major carbohydrate active-transport
+ system'"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphoenolpyruvate-protein phosphotransferase"
+ /protein_id="YP_001569533.1"
+ /db_xref="GI:161502421"
+ /db_xref="InterPro:IPR000121"
+ /db_xref="InterPro:IPR006318"
+ /db_xref="InterPro:IPR008279"
+ /db_xref="InterPro:IPR008731"
+ /translation="MISGILASPGIAFGKALLLKEDEIVIDRKKISADKVDQEVERFL
+ SGRAKASAQLEAIKTKAGETFGEEKEAIFEGHIMLLEDEELEQEIIALIKDKHMTADA
+ AAHEVIEGQATALEELDDEYLKERAADVRDIGKRLLRNILGLAIIDLSAIQEEVILVA
+ ADLTPSETAQLNLQKVLGFITDAGGRTSHTSIMARSLELPAIVGTGSVTSQVKNGDFI
+ ILDAVNNQVYVNPTNDVIEQLRAVQEQVASEKAELAKLKDLPAITLDGHQVEVCANIG
+ TVRDVEGAERNGAEGVGLYRTEFLFMDRDALPTEEEQFAAYKAVAEACGSQAVIVRTM
+ DIGGDKELPYMNFPKEENPFLGWRAVRIAMDRKEILRDQVRAILRASAFGKLRIMFPM
+ IISVEEVRALRKEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIARHLAKEVDFFS
+ IGTNDLTQYTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAEGKWTGMCGELAGD
+ ERATLLLLGMGLDEFSMSAISIPRIKKIIRNTNFEDAKVLAEQALAQPTTDELMTLVN
+ KFIEEKTIC"
+ misc_feature complement(458442..460166)
+ /locus_tag="SARI_00455"
+ /note="phosphoenolpyruvate-protein phosphotransferase;
+ Provisional; Region: PRK11177"
+ /db_xref="CDD:183017"
+ misc_feature complement(459786..460163)
+ /locus_tag="SARI_00455"
+ /note="PEP-utilising enzyme, N-terminal; Region:
+ PEP-utilisers_N; pfam05524"
+ /db_xref="CDD:218623"
+ misc_feature complement(459495..459713)
+ /locus_tag="SARI_00455"
+ /note="PEP-utilising enzyme, mobile domain; Region:
+ PEP-utilizers; pfam00391"
+ /db_xref="CDD:201201"
+ misc_feature complement(458541..459419)
+ /locus_tag="SARI_00455"
+ /note="PEP-utilising enzyme, TIM barrel domain; Region:
+ PEP-utilizers_C; pfam02896"
+ /db_xref="CDD:217274"
+ gene complement(460215..460472)
+ /locus_tag="SARI_00456"
+ CDS complement(460215..460472)
+ /locus_tag="SARI_00456"
+ /inference="protein motif:BlastProDom:IPR000032"
+ /inference="protein motif:Gene3D:IPR000032"
+ /inference="protein motif:HMMPfam:IPR000032"
+ /inference="protein motif:HMMTigr:IPR005698"
+ /inference="protein motif:ScanRegExp:IPR001020"
+ /inference="protein motif:ScanRegExp:IPR002114"
+ /inference="protein motif:superfamily:IPR000032"
+ /inference="similar to AA sequence:INSD:ABG70428.1"
+ /note="'KEGG: bci:BCI_0069 1.5e-32 ptsH; phosphocarrier
+ protein HPr K00890;
+ COG: COG1925 Phosphotransferase system, HPr-related
+ proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="PTS system phosphohistidinoprotein-hexose
+ phosphotransferase subunit Hpr"
+ /protein_id="YP_001569534.1"
+ /db_xref="GI:161502422"
+ /db_xref="InterPro:IPR000032"
+ /db_xref="InterPro:IPR001020"
+ /db_xref="InterPro:IPR002114"
+ /db_xref="InterPro:IPR005698"
+ /translation="MFQQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASA
+ KSLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKLMAELE"
+ misc_feature complement(460230..460460)
+ /locus_tag="SARI_00456"
+ /note="Histidine-containing phosphocarrier protein
+ (HPr)-like proteins. HPr is a central component of the
+ bacterial phosphoenolpyruvate sugar phosphotransferase
+ system (PTS). The PTS catalyses the phosphorylation of
+ sugar substrates during their translocation...; Region:
+ PTS-HPr_like; cd00367"
+ /db_xref="CDD:238217"
+ misc_feature complement(460449..460460)
+ /locus_tag="SARI_00456"
+ /note="dimerization domain swap beta strand [polypeptide
+ binding]; other site"
+ /db_xref="CDD:238217"
+ misc_feature complement(order(460317..460322,460329..460340,
+ 460392..460394,460401..460403,460413..460418,
+ 460422..460427,460431..460433))
+ /locus_tag="SARI_00456"
+ /note="regulatory protein interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:238217"
+ misc_feature complement(460428..460430)
+ /locus_tag="SARI_00456"
+ /note="active site"
+ /db_xref="CDD:238217"
+ misc_feature complement(460335..460337)
+ /locus_tag="SARI_00456"
+ /note="regulatory phosphorylation site [posttranslational
+ modification]; other site"
+ /db_xref="CDD:238217"
+ unsure 460548..461017
+ /note="Sequence derived from one plasmid subclone"
+ gene 460581..460736
+ /locus_tag="SARI_00457"
+ CDS 460581..460736
+ /locus_tag="SARI_00457"
+ /inference="similar to AA sequence:INSD:EAY45857.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569535.1"
+ /db_xref="GI:161502423"
+ /translation="MFYAIRCWQLMAADVSLVIKHYAAKGRFEPNHKIDSANALPVTI
+ NFAHQNN"
+ gene complement(460855..461826)
+ /locus_tag="SARI_00458"
+ CDS complement(460855..461826)
+ /locus_tag="SARI_00458"
+ /inference="protein motif:HMMPfam:IPR001926"
+ /inference="protein motif:HMMTigr:IPR005856"
+ /inference="protein motif:HMMTigr:IPR005859"
+ /inference="protein motif:ScanRegExp:IPR001216"
+ /inference="similar to AA sequence:INSD:"
+ /note="CysK; forms a complex with serine acetyltransferase
+ CysE; functions in cysteine biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="cysteine synthase A"
+ /protein_id="YP_001569536.1"
+ /db_xref="GI:161502424"
+ /db_xref="InterPro:IPR001216"
+ /db_xref="InterPro:IPR001926"
+ /db_xref="InterPro:IPR005856"
+ /db_xref="InterPro:IPR005859"
+ /translation="MSKIYEDNSLTIGHTPLVRLNRIGNGRILAKVESRNPSFSVKCR
+ IGANMIWDAEKRGVLKPGVELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRK
+ LLKALGANLVLTEGAKGMKGAIQKAEEIVASNPQKYLLLQQFSNPANPEIHEKTTGPE
+ IWEDTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQALAGE
+ ELKPGPHKIQGIGAGFIPGNLDLKLIDKVVGITNEEAISTARRLMEEEGILAGISSGA
+ AVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKELQQ"
+ misc_feature complement(460900..461817)
+ /locus_tag="SARI_00458"
+ /note="Cysteine synthase [Amino acid transport and
+ metabolism]; Region: CysK; COG0031"
+ /db_xref="CDD:223110"
+ misc_feature complement(460903..461790)
+ /locus_tag="SARI_00458"
+ /note="CBS_like: This subgroup includes Cystathionine
+ beta-synthase (CBS) and Cysteine synthase. CBS is a unique
+ heme-containing enzyme that catalyzes a pyridoxal
+ 5'-phosphate (PLP)-dependent condensation of serine
+ and homocysteine to give cystathionine; Region: CBS_like;
+ cd01561"
+ /db_xref="CDD:107204"
+ misc_feature complement(order(460906..460908,460915..460917,
+ 460945..460947,461020..461028,461032..461040,
+ 461335..461340,461506..461511,461518..461523,
+ 461530..461535,461581..461583,461590..461592,
+ 461716..461718,461722..461724,461740..461742,
+ 461770..461778))
+ /locus_tag="SARI_00458"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:107204"
+ misc_feature complement(order(460924..460929,461008..461010,
+ 461140..461142,461284..461301,461611..461613,
+ 461701..461703))
+ /locus_tag="SARI_00458"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:107204"
+ misc_feature complement(461701..461703)
+ /locus_tag="SARI_00458"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:107204"
+ gene complement(461990..462754)
+ /locus_tag="SARI_00459"
+ CDS complement(461990..462754)
+ /locus_tag="SARI_00459"
+ /inference="protein motif:HMMPfam:IPR007496"
+ /inference="similar to AA sequence:SwissProt:Q5PND3"
+ /note="'KEGG: ret:RHE_CH03674 3.1e-06 hypothetical protein
+ K01954;
+ COG: COG2981 Uncharacterized protein involved in cysteine
+ biosynthesis;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="sulfate transport protein CysZ"
+ /protein_id="YP_001569537.2"
+ /db_xref="GI:448236196"
+ /db_xref="InterPro:IPR007496"
+ /translation="MVSSSTTTVPRSGVYYFSQGWKLVTLPGIRRFVILPLLVNIVLM
+ GGAFWWLFTQLDAWIPSLMSHVPDWLQWLSYLLWPIAVISVLLVFGYFFSTLANWIAA
+ PFNGLLAEQLEARLTGATPPDTGVLGIMKDVPRIMKREWQKLAWYLPRAIVLLVLYFI
+ PGIGQTIAPVLWFLFSAWMLAIQYCDYPFDNHKVPFKTMRAALRTQKVANMQFGALTS
+ LFTMIPVLNLFIMPVAVCGATAMWVDCWRAKHALWK"
+ misc_feature complement(461993..462745)
+ /locus_tag="SARI_00459"
+ /note="putative sulfate transport protein CysZ; Validated;
+ Region: PRK04949"
+ /db_xref="CDD:179898"
+ unsure 462035..462367
+ /note="Sequence derived from one plasmid subclone"
+ gene 462985..463965
+ /locus_tag="SARI_00460"
+ CDS 462985..463965
+ /locus_tag="SARI_00460"
+ /inference="protein motif:HMMPfam:IPR007449"
+ /inference="protein motif:HMMSmart:IPR007449"
+ /inference="protein motif:HMMTigr:IPR011919"
+ /inference="similar to AA sequence:INSD:AAV76448.1"
+ /note="interacts with cell division protein FitsZ and may
+ be required to anchor septal ring structure"
+ /codon_start=1
+ /transl_table=11
+ /product="cell division protein ZipA"
+ /protein_id="YP_001569538.1"
+ /db_xref="GI:161502426"
+ /db_xref="InterPro:IPR007449"
+ /db_xref="InterPro:IPR011919"
+ /translation="MMQDLRLILIIVGAIAIIALLVHGFWTSRKERSSMFRDRPLKRM
+ KSKRDDDSYDDDVDADEGVGEVRVHRVNHAPGQPQEHDAPRQSPQHQYQPPYASAQPR
+ PATPPQPQAPQQQPVQQPPQPVPPPQQVQPSAPPVQPQQPAQPSQAPQPVAQPAPPLA
+ EQTFQPADPAVEAEPVVEEAPVVEKPQRKEVVIIMNVAAHHGSELNGEVLLNSIQQSG
+ FKFGDMNIFHRHLSPDGSGPALFSLANMVNPGTFDPEMTDFTTPGVTIFMQVPSYGDA
+ LQNFKLMLQSAQHIADEVGGVVLDDQRRMMTPQKLREYQDRIREVMDANA"
+ misc_feature 463048..>463272
+ /locus_tag="SARI_00460"
+ /note="ZipA C-terminal domain. ZipA, a membrane-anchored
+ protein, is one of at least nine essential gene products
+ necessary for assembly of the septal ring which mediates
+ cell division in E.coli. ZipA and FtsA directly bind FtsZ,
+ a homolog of eukaryotic...; Region: ZipA; cl12038"
+ /db_xref="CDD:245845"
+ misc_feature <463537..463962
+ /locus_tag="SARI_00460"
+ /note="cell division protein ZipA; Provisional; Region:
+ PRK03427"
+ /db_xref="CDD:235124"
+ misc_feature 463552..463938
+ /locus_tag="SARI_00460"
+ /note="ZipA C-terminal domain. ZipA, a membrane-anchored
+ protein, is one of at least nine essential gene products
+ necessary for assembly of the septal ring which mediates
+ cell division in E.coli. ZipA and FtsA directly bind FtsZ,
+ a homolog of eukaryotic...; Region: ZipA; cd00231"
+ /db_xref="CDD:238142"
+ misc_feature order(463558..463560,463564..463566,463654..463656,
+ 463660..463662,463714..463716,463720..463728,
+ 463777..463779,463783..463785,463891..463893)
+ /locus_tag="SARI_00460"
+ /note="FtsZ protein binding site [polypeptide binding];
+ other site"
+ /db_xref="CDD:238142"
+ gene 464037..466052
+ /gene="ligA"
+ /locus_tag="SARI_00461"
+ CDS 464037..466052
+ /gene="ligA"
+ /locus_tag="SARI_00461"
+ /inference="protein motif:BlastProDom:IPR004150"
+ /inference="protein motif:Gene3D:IPR004150"
+ /inference="protein motif:HMMPfam:IPR000445"
+ /inference="protein motif:HMMPfam:IPR001357"
+ /inference="protein motif:HMMPfam:IPR004149"
+ /inference="protein motif:HMMPfam:IPR004150"
+ /inference="protein motif:HMMPfam:IPR013839"
+ /inference="protein motif:HMMSmart:IPR001357"
+ /inference="protein motif:HMMSmart:IPR013840"
+ /inference="protein motif:HMMTigr:IPR001679"
+ /inference="protein motif:ScanRegExp:IPR001679"
+ /inference="protein motif:superfamily:IPR008994"
+ /inference="protein motif:superfamily:IPR010994"
+ /note="this protein catalyzes the formation of
+ phosphodiester linkages between 5'-phosphoryl and
+ 3'-hydroxyl groups in double-stranded DNA using NAD as a
+ coenzyme and as the energy source for the reaction;
+ essential for DNA replication and repair of damaged DNA;
+ similar to ligase LigB"
+ /codon_start=1
+ /transl_table=11
+ /product="NAD-dependent DNA ligase LigA"
+ /protein_id="YP_001569539.1"
+ /db_xref="GI:161502427"
+ /db_xref="InterPro:IPR000445"
+ /db_xref="InterPro:IPR001357"
+ /db_xref="InterPro:IPR001679"
+ /db_xref="InterPro:IPR004149"
+ /db_xref="InterPro:IPR004150"
+ /db_xref="InterPro:IPR008994"
+ /db_xref="InterPro:IPR010994"
+ /db_xref="InterPro:IPR013839"
+ /db_xref="InterPro:IPR013840"
+ /translation="MEPIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRA
+ LEAQRPDLITPDSPTQRVGAAPLTAFNQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL
+ KSTENVTWCCELKLDGLAVSILYENGVLVRAATRGDGTTGEDITSNVRTIRAIPLKLR
+ GDNIPARLEVRGEVFLPQAGFEKINEEARRSGGKVFANPRNAAAGSLRQLDPRITAKR
+ PLTFFCYGVGILEGGELPDTHLGRLLQFKAWGLPVSDRVTLCDSPQAVLAFYHNVEED
+ RPTLGFDIDGVVIKVNSLALQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRT
+ GAITPVARLEPVQVAGVLVSNATLHNADEIDRLGLRIGDKVVIRRAGDVIPQVVNVVL
+ SERPEETRPIVFPTHCPVCGSDVERVEGEAVTRCTGGLICGAQRKESLKHFVSRRAMD
+ VDGMGDKIIDQLVEREYVHTPADLFRLTAGKLTGLDRMGPKSAQNVVNALEKAKATIF
+ ARFLYALGIREVGEATAAGLAAYFGTLEALQAASIDELQKVPDVGIVVATHVFNFFAE
+ ESNREVIGQLLAEGVHWPAPVVINAQEIDSPFAGKTVVLTGSLSQMSRDDAKARLVEL
+ GAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIDVIDEAEMLRLLGV"
+ misc_feature 464037..466046
+ /gene="ligA"
+ /locus_tag="SARI_00461"
+ /note="NAD-dependent DNA ligase LigA; Validated; Region:
+ ligA; PRK07956"
+ /db_xref="CDD:236137"
+ misc_feature 464052..464987
+ /gene="ligA"
+ /locus_tag="SARI_00461"
+ /note="NAD+ dependent DNA ligase adenylation domain. DNA
+ ligases catalyze the crucial step of joining the breaks in
+ duplex DNA during DNA replication, repair and
+ recombination, utilizing either ATP or NAD(+) as a
+ cofactor, but using the same basic reaction...; Region:
+ LIGANc; cd00114"
+ /db_xref="CDD:238062"
+ misc_feature order(464280..464282,464373..464375,464379..464381,
+ 464442..464444,464553..464555,464709..464711,
+ 464898..464900,464904..464906)
+ /gene="ligA"
+ /locus_tag="SARI_00461"
+ /note="nucleotide binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:238062"
+ misc_feature order(464379..464381,464385..464390)
+ /gene="ligA"
+ /locus_tag="SARI_00461"
+ /note="K-X-D-G motif; other site"
+ /db_xref="CDD:238062"
+ misc_feature 464379..464381
+ /gene="ligA"
+ /locus_tag="SARI_00461"
+ /note="catalytic site [active]"
+ /db_xref="CDD:238062"
+ misc_feature 464994..465239
+ /gene="ligA"
+ /locus_tag="SARI_00461"
+ /note="NAD-dependent DNA ligase OB-fold domain; Region:
+ DNA_ligase_OB; pfam03120"
+ /db_xref="CDD:145978"
+ misc_feature 465255..465338
+ /gene="ligA"
+ /locus_tag="SARI_00461"
+ /note="NAD-dependent DNA ligase C4 zinc finger domain;
+ Region: DNA_ligase_ZBD; pfam03119"
+ /db_xref="CDD:202542"
+ misc_feature 465834..466043
+ /gene="ligA"
+ /locus_tag="SARI_00461"
+ /note="Breast Cancer Suppressor Protein (BRCA1),
+ carboxy-terminal domain. The BRCT domain is found within
+ many DNA damage repair and cell cycle checkpoint proteins.
+ The unique diversity of this domain superfamily allows
+ BRCT modules to interact forming homo...; Region: BRCT;
+ cd00027"
+ /db_xref="CDD:237994"
+ misc_feature order(465879..465881,465891..465893,465900..465902,
+ 465909..465911,465915..465917)
+ /gene="ligA"
+ /locus_tag="SARI_00461"
+ /note="Dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:237994"
+ misc_feature order(466026..466028,466038..466040)
+ /gene="ligA"
+ /locus_tag="SARI_00461"
+ /note="BRCT sequence motif; other site"
+ /db_xref="CDD:237994"
+ unsure 464296..464415
+ /gene="ligA"
+ /locus_tag="SARI_00461"
+ /note="Sequence derived from one plasmid subclone"
+ unsure 465174..465320
+ /gene="ligA"
+ /locus_tag="SARI_00461"
+ /note="Sequence derived from one plasmid subclone"
+ gene 466054..466272
+ /locus_tag="SARI_00462"
+ CDS 466054..466272
+ /locus_tag="SARI_00462"
+ /inference="similar to AA sequence:INSD:AAL21320.1"
+ /note="'KEGG: cmu:TC0823 0.00043 DNA polymerase III,
+ epsilon subunit, putative K02342;
+ COG: COG3530 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569540.1"
+ /db_xref="GI:161502428"
+ /translation="MEKAQLIAIANTLMPFGKYQGRRLIDLPEEYLLWFARKEQFPAG
+ KLGELMQITLLIKTEGLTQLVQPLKRPL"
+ misc_feature 466054..466269
+ /locus_tag="SARI_00462"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG3530"
+ /db_xref="CDD:226061"
+ unsure 466210..466327
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(466269..467267)
+ /locus_tag="SARI_00463"
+ CDS complement(466269..467267)
+ /locus_tag="SARI_00463"
+ /inference="protein motif:HMMPfam:IPR002657"
+ /inference="similar to AA sequence:REFSEQ:YP_217410.1"
+ /note="'COG: COG0385 Predicted Na+-dependent transporter;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569541.1"
+ /db_xref="GI:161502429"
+ /db_xref="InterPro:IPR002657"
+ /translation="MKLFRILDPFTLTLITVVLLASFFPAEGGFVPVVEGITTAAIAL
+ LFFMHGAKLSRDAIIAGGSHWRLHLWVMCSTFVLFPVLGVLFAWWAPVNVDPMLYSGF
+ LYLCILPATVQSAIAFTSLAGGNVAAAVCSASASSLLGIFLSPLLVGLVMNIHGAQGS
+ LEEVGRIMLQLLLPFVLGHLSRPWIGNWVARNKKWIAKTDQTSILLVVYSAFSEAVVN
+ GIWHKVGWGSLLFIVVVSLVLLAIVIAINVFVARKCGFNKADEITIVFCGSKKSLANG
+ IPMANILFPTSVLGMMVLPLMIFHQIQLMVCAELARRYKRQTEKLQAQQESCAAKA"
+ misc_feature complement(466287..467267)
+ /locus_tag="SARI_00463"
+ /note="Predicted Na+-dependent transporter [General
+ function prediction only]; Region: COG0385"
+ /db_xref="CDD:223462"
+ misc_feature complement(466320..467246)
+ /locus_tag="SARI_00463"
+ /note="SBF-like CPA transporter family (DUF4137); Region:
+ DUF4137; pfam13593"
+ /db_xref="CDD:222249"
+ gene 467357..467949
+ /locus_tag="SARI_00464"
+ /note="Pseudogene compared to gi|16765744|ref|NP_461359.1|
+ putative transcriptional regulator [Salmonella typhimurium
+ LT2]"
+ unsure 467503..467521
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(468126..468198)
+ /locus_tag="SARI_00465"
+ tRNA complement(468126..468198)
+ /locus_tag="SARI_00465"
+ /product="tRNA-Lys"
+ gene complement(468206..468278)
+ /locus_tag="SARI_00466"
+ tRNA complement(468206..468278)
+ /locus_tag="SARI_00466"
+ /product="tRNA-Val"
+ gene complement(468323..468395)
+ /locus_tag="SARI_00467"
+ tRNA complement(468323..468395)
+ /locus_tag="SARI_00467"
+ /product="tRNA-Val"
+ gene complement(468444..468516)
+ /locus_tag="SARI_00468"
+ tRNA complement(468444..468516)
+ /locus_tag="SARI_00468"
+ /product="tRNA-Val"
+ gene 468775..470190
+ /gene="gltX"
+ /locus_tag="SARI_00469"
+ CDS 468775..470190
+ /gene="gltX"
+ /locus_tag="SARI_00469"
+ /inference="protein motif:FPrintScan:IPR000924"
+ /inference="protein motif:Gene3D:IPR008925"
+ /inference="protein motif:HMMPanther:IPR000924"
+ /inference="protein motif:HMMPfam:IPR000924"
+ /inference="protein motif:HMMTigr:IPR004527"
+ /inference="protein motif:ScanRegExp:IPR001412"
+ /inference="protein motif:superfamily:IPR008925"
+ /inference="similar to AA sequence:SwissProt:P0A2K4"
+ /note="Charges one glutamine molecule and pairs it to its
+ corresponding RNA trinucleotide during protein
+ translation"
+ /codon_start=1
+ /transl_table=11
+ /product="glutamyl-tRNA synthetase"
+ /protein_id="YP_001569542.1"
+ /db_xref="GI:161502430"
+ /db_xref="InterPro:IPR000924"
+ /db_xref="InterPro:IPR001412"
+ /db_xref="InterPro:IPR004527"
+ /db_xref="InterPro:IPR008925"
+ /translation="MKIKTRFAPSPTGYLHVGGARTALYSWLFARHHGGEFVLRIEDT
+ DLERSTPEAIEAIMDGMNWLNLEWDEGPYFQTKRFDRYNAVIDEMLEAGTAYKCYCSK
+ ERLDQLREEQMAKGEKPRYDGRCRHSHEHHADDEPCVVRFANPQDGSVIFDDQIRGPI
+ EFSNQELDDLIIRRTDGSPTYNFCVVVDDWDMEITHVIRGEDHINNTPRQINILKALN
+ APVPMYAHVSMINGDDGKKLSKRHGAVSVMQYRDDGYLPEALLNYLVRLGWSNGDQEI
+ FTREEMINLFSLGAVSKSSSAFNTDKLLWLNHHYINTLAPEYVATHLQWHIEQENIDT
+ RNGPQLAELVKLLGERCKTLKEMAQSCRYFYEDFSEFDADAAKKHLRPVARQPLEVVR
+ DKLSAITDWSAENVHHAIQSTAEELEVGMGKVGMPLRVAVTGAGQSPALDVTVHAIGK
+ TRSIERINKALGFIAERESQQ"
+ misc_feature 468775..470157
+ /gene="gltX"
+ /locus_tag="SARI_00469"
+ /note="glutamyl-tRNA synthetase; Reviewed; Region: gltX;
+ PRK01406"
+ /db_xref="CDD:234953"
+ misc_feature 468778..>469071
+ /gene="gltX"
+ /locus_tag="SARI_00469"
+ /note="catalytic core domain of discriminating
+ glutamyl-tRNA synthetase; Region: GluRS_core; cd00808"
+ /db_xref="CDD:173905"
+ misc_feature order(468790..468792,468796..468804,468826..468831,
+ 468835..468840,468898..468900,469069..469071)
+ /gene="gltX"
+ /locus_tag="SARI_00469"
+ /note="active site"
+ /db_xref="CDD:173905"
+ misc_feature 468820..468831
+ /gene="gltX"
+ /locus_tag="SARI_00469"
+ /note="HIGH motif; other site"
+ /db_xref="CDD:173905"
+ misc_feature <469300..469713
+ /gene="gltX"
+ /locus_tag="SARI_00469"
+ /note="catalytic core domain of discriminating
+ glutamyl-tRNA synthetase; Region: GluRS_core; cd00808"
+ /db_xref="CDD:173905"
+ misc_feature order(469315..469317,469327..469329,469369..469374,
+ 469378..469383,469456..469461,469483..469488)
+ /gene="gltX"
+ /locus_tag="SARI_00469"
+ /note="active site"
+ /db_xref="CDD:173905"
+ misc_feature 469483..469497
+ /gene="gltX"
+ /locus_tag="SARI_00469"
+ /note="KMSKS motif; other site"
+ /db_xref="CDD:173905"
+ gene complement(470244..470636)
+ /locus_tag="SARI_00470"
+ CDS complement(470244..470636)
+ /locus_tag="SARI_00470"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR010749"
+ /inference="protein motif:superfamily:IPR009061"
+ /inference="similar to AA sequence:INSD:AAV76454.1"
+ /note="'COG: NOG09785 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569543.1"
+ /db_xref="GI:161502431"
+ /db_xref="InterPro:IPR009061"
+ /db_xref="InterPro:IPR010749"
+ /db_xref="InterPro:IPR011991"
+ /translation="MKRLRSKMTTEELAECLGVARQTVNRWIREQSWKTEKFPGVKGG
+ RARLIHIDAGVREFILNIPAFRKLPAFYQAEEPFAEYANAAHSHAYRQIIDAVENMSA
+ QEQEKLALFLSREGIRGFLTRLGINASD"
+ misc_feature complement(470262..470636)
+ /locus_tag="SARI_00470"
+ /note="Winged helix-turn helix; Region: HTH_29; pfam13551"
+ /db_xref="CDD:222216"
+ misc_feature complement(470259..470615)
+ /locus_tag="SARI_00470"
+ /note="Putative transcription regulator (DUF1323); Region:
+ DUF1323; pfam07037"
+ /db_xref="CDD:148573"
+ gene complement(470638..471000)
+ /locus_tag="SARI_00471"
+ CDS complement(470638..471000)
+ /locus_tag="SARI_00471"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR010749"
+ /inference="protein motif:superfamily:IPR009061"
+ /inference="similar to AA sequence:INSD:AAL21311.1"
+ /note="'KEGG: xfa:XF1823 0.0055 tail-specific protease
+ K03797;
+ COG: NOG09771 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569544.1"
+ /db_xref="GI:161502432"
+ /db_xref="InterPro:IPR009061"
+ /db_xref="InterPro:IPR010749"
+ /db_xref="InterPro:IPR011991"
+ /translation="MFKERMTPEELANLTGYSRQTINKWVRKEGWATSPKPGVQGGKA
+ RLVHVNEQVREYIRSAERSVDHHTDTFMPASDASLEALLMTLAKEMTSSEQKQFTSLL
+ VREGITGLLQRLGIRDSK"
+ misc_feature complement(470644..470985)
+ /locus_tag="SARI_00471"
+ /note="Putative transcription regulator (DUF1323); Region:
+ DUF1323; pfam07037"
+ /db_xref="CDD:148573"
+ unsure 470733..471253
+ /note="Sequence derived from one plasmid subclone"
+ gene 471222..471294
+ /locus_tag="SARI_00472"
+ tRNA 471222..471294
+ /locus_tag="SARI_00472"
+ /product="tRNA-Ala"
+ gene 471340..471412
+ /locus_tag="SARI_00473"
+ tRNA 471340..471412
+ /locus_tag="SARI_00473"
+ /product="tRNA-Ala"
+ unsure 471393..471585
+ /note="Sequence derived from one plasmid subclone"
+ gene 471605..473794
+ /locus_tag="SARI_00474"
+ CDS 471605..473794
+ /locus_tag="SARI_00474"
+ /inference="protein motif:HMMPfam:IPR001633"
+ /inference="protein motif:HMMPfam:IPR007895"
+ /inference="protein motif:HMMSmart:IPR000160"
+ /inference="protein motif:HMMSmart:IPR001633"
+ /note="'KEGG: shn:Shewana3_3829 6.7e-23 diguanylate
+ cyclase/phosphodiesterase with PAS/PAC sensor(s) K01745;
+ COG: COG2199 FOG: GGDEF domain;
+ Psort location: endoplasmic reticulum, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569545.1"
+ /db_xref="GI:161502433"
+ /db_xref="InterPro:IPR000160"
+ /db_xref="InterPro:IPR001633"
+ /db_xref="InterPro:IPR007895"
+ /translation="MPDKCNLLENIKIFLLALSLTVPAILVSRVISPRATIDSSYIFL
+ AWLPLCVMFAVLFLFGRRGVAPMAGGMMLTNEWNFHLPLPQAMVLLFCQTFPVLLACA
+ IVRWQLGARWRYGIPNKDIWLRVFWLGLMTPLGIKISMHLAGHYLAFPVTISTFFGGG
+ TAIFLIVDLLSLISAVLIFTLFFYYPMRMIVSPHYIRIFWRRNVAPYLAKEKRLFTLI
+ WFATLATLLTVLCTPFETKYIAGYLVPVLFIGFTLGVGKISYPLLNFSWAITTLFLLI
+ YNRNFLQGVGSEYSLAFILSVLISFSICLLYMARINQRSEWLNRQWHSRALTEPLTQL
+ PNLRALEQFLLQGAGQSVCYLRMENLEFLSRHYGMLMRVHCEREVFRALQPLLQEKEK
+ VFHLPGSELLLVLAGPETEARLQYMINVLNNRKIYWNNTGLEMEYGASWGTFDGRQET
+ LQPLLGQLSWLAEQSCSHRRVLSLTHSIEAASGQTTERVLRLQKIRQALERGALVLYA
+ QPIRDAQGKGYDEILTRLRCDEGIMMPNQFIPLIAQFNLSVRFDMQVVEALLQWLSVH
+ PSAEQGARFSVNLMPLTLLQKETASRIIQLFKRYGVPPASVIIEITEEQAFSHSEISM
+ YNINQLRKFGLKIAIDDFGTGYANYERLKRLKADIIKIDGCFVKDILTDSLDAMIVKS
+ ITDLAKAKSLSVVAEFVETPEQRDLLLQLGVHSLQGYLIGRPRPLGE"
+ misc_feature 471647..472552
+ /locus_tag="SARI_00474"
+ /note="MASE1; Region: MASE1; pfam05231"
+ /db_xref="CDD:218514"
+ misc_feature 472523..>472924
+ /locus_tag="SARI_00474"
+ /note="c-di-GMP synthetase (diguanylate cyclase, GGDEF
+ domain) [Signal transduction mechanisms]; Region:
+ COG2199"
+ /db_xref="CDD:225109"
+ misc_feature 472577..473020
+ /locus_tag="SARI_00474"
+ /note="diguanylate cyclase; Region: GGDEF; smart00267"
+ /db_xref="CDD:128563"
+ misc_feature 473087..473791
+ /locus_tag="SARI_00474"
+ /note="EAL domain. This domain is found in diverse
+ bacterial signaling proteins. It is called EAL after its
+ conserved residues and is also known as domain of unknown
+ function 2 (DUF2). The EAL domain has been shown to
+ stimulate degradation of a second...; Region: EAL;
+ cd01948"
+ /db_xref="CDD:238923"
+ unsure 471923..471969
+ /locus_tag="SARI_00474"
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(473857..475059)
+ /locus_tag="SARI_00475"
+ CDS complement(473857..475059)
+ /locus_tag="SARI_00475"
+ /inference="protein motif:BlastProDom:IPR008276"
+ /inference="protein motif:HMMPanther:IPR008276"
+ /inference="protein motif:HMMPfam:IPR002668"
+ /inference="protein motif:HMMPfam:IPR011642"
+ /inference="protein motif:HMMPfam:IPR011657"
+ /inference="protein motif:HMMTigr:IPR008276"
+ /inference="similar to AA sequence:INSD:ABB66979.1"
+ /note="'COG: COG1972 Nucleoside permease;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569546.1"
+ /db_xref="GI:161502434"
+ /db_xref="InterPro:IPR002668"
+ /db_xref="InterPro:IPR008276"
+ /db_xref="InterPro:IPR011642"
+ /db_xref="InterPro:IPR011657"
+ /translation="MDRVLHFVLALAVVAVLALLVSSDRKKIRIRYVIQLLIIEVLLA
+ WFFLNSDVGLGFVKGFSEMFEKLLGFANEGTNFVFGSMNDQGLAFFFLKVLCPIVFIS
+ ALIGILQHIRVLPMVIRAIGFLLSKVNGMGKLESFNAVSSLILGQSENFIAYKDILGK
+ MSRNRMYTMAATAMSTVSMSIVGAYMTMLEPKYVVAALVLNMFSTFIVLSLINPYRVD
+ ASEENIQMSNLHEGQSFFEMLGEYILAGFKVAVIVAAMLIGFIALIAALNALFATVTG
+ WFGHSISFQGILGYIFYPVAWVMGVPSSEALQVGSIMATKLVSNEFVAMMDLQKIAAT
+ LSPRAVGIISVFLVSFANFSSIGIIAGAIKGLNEEQGNVVSRFGLKLVYGSTLVSVLS
+ ASIAALVL"
+ misc_feature complement(473860..474996)
+ /locus_tag="SARI_00475"
+ /note="Nucleoside permease [Nucleotide transport and
+ metabolism]; Region: NupC; COG1972"
+ /db_xref="CDD:224883"
+ misc_feature complement(474814..474996)
+ /locus_tag="SARI_00475"
+ /note="Na+ dependent nucleoside transporter N-terminus;
+ Region: Nucleos_tra2_N; pfam01773"
+ /db_xref="CDD:201962"
+ misc_feature complement(474484..474789)
+ /locus_tag="SARI_00475"
+ /note="Nucleoside recognition; Region: Gate; pfam07670"
+ /db_xref="CDD:219507"
+ misc_feature complement(473860..474483)
+ /locus_tag="SARI_00475"
+ /note="Na+ dependent nucleoside transporter C-terminus;
+ Region: Nucleos_tra2_C; pfam07662"
+ /db_xref="CDD:219502"
+ gene 475384..476643
+ /locus_tag="SARI_00476"
+ CDS 475384..476643
+ /locus_tag="SARI_00476"
+ /inference="protein motif:BlastProDom:IPR001046"
+ /inference="protein motif:HMMPanther:IPR001046"
+ /inference="protein motif:HMMPfam:IPR001046"
+ /inference="protein motif:HMMTigr:IPR001046"
+ /inference="protein motif:superfamily:IPR008928"
+ /inference="similar to AA sequence:REFSEQ:NP_461349.1"
+ /note="'COG: COG1914 Mn2+ and Fe2+ transporters of the
+ NRAMP family;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="manganese transport protein MntH"
+ /protein_id="YP_001569547.1"
+ /db_xref="GI:161502435"
+ /db_xref="InterPro:IPR001046"
+ /db_xref="InterPro:IPR008928"
+ /translation="MFLRQKMTDNRVENSSGRAGRKLRLALMGPAFIAAIGYIDPGNF
+ ATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWF
+ YWVQAEIIAMATDLAEFIGAAIGFRLILGVSLLQGAVLTGIATFLILMLQRRGQKPLE
+ KVIGGLLLFVAAAYIVELFFSQPDMAQLGKGMVIPALPNSEAVFLAAGVLGATIMPHV
+ IYLHSSLTQHLHGGTRQQRYSATKWDVAIAMTIAGFVNLAMMATAAAAFHFSGHTGIA
+ DLDQAYLTLEPLLSHAAATVFGLSLVAAGLSSTVVGTLAGQVVMQGFVRFHIPLWVRR
+ TITMLPSFIVIFMGLDPTRILVMSQVLLSFGIALALVPLLIFTSNSTLMGELVNTRRV
+ KQVGWIIVVLVVALNIWLLVGTVMGLS"
+ misc_feature 475402..476637
+ /locus_tag="SARI_00476"
+ /note="manganese transport protein MntH; Reviewed; Region:
+ PRK00701"
+ /db_xref="CDD:234815"
+ misc_feature 475513..476553
+ /locus_tag="SARI_00476"
+ /note="Natural resistance-associated macrophage protein;
+ Region: Nramp; pfam01566"
+ /db_xref="CDD:216575"
+ gene complement(476705..477031)
+ /locus_tag="SARI_00477"
+ CDS complement(476705..477031)
+ /locus_tag="SARI_00477"
+ /inference="similar to AA sequence:INSD:AAL21307.1"
+ /note="'KEGG: vpa:VP2751 0.00021 penicillin-binding
+ protein 1A K05366;
+ COG: NOG09770 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569548.1"
+ /db_xref="GI:161502436"
+ /translation="MFRSLILAAALLAFTPLAANAGEITLLPSIKLQIGDRDDYGNYW
+ DGGRWRDRDYWHNHYQWRKNRWWRHDNGYHRGWDKRNAYERGYREGWRDRDDHHRRGH
+ GHKHHH"
+ misc_feature complement(476765..476965)
+ /locus_tag="SARI_00477"
+ /note="Protein of unknown function (DUF2502); Region:
+ DUF2502; pfam10697"
+ /db_xref="CDD:220851"
+ gene complement(477145..478143)
+ /locus_tag="SARI_00478"
+ CDS complement(477145..478143)
+ /locus_tag="SARI_00478"
+ /inference="protein motif:BlastProDom:IPR001395"
+ /inference="protein motif:Gene3D:IPR001395"
+ /inference="protein motif:HMMPanther:IPR001395"
+ /inference="protein motif:HMMPanther:IPR005399"
+ /inference="protein motif:HMMPfam:IPR001395"
+ /inference="similar to AA sequence:REFSEQ:YP_149771.1"
+ /note="'KEGG: ret:RHE_CH02454 5.5e-108 probable
+ oxidoreductase protein K05882;
+ COG: COG0667 Predicted oxidoreductases (related to
+ aryl-alcohol dehydrogenases);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569549.1"
+ /db_xref="GI:161502437"
+ /db_xref="InterPro:IPR001395"
+ /db_xref="InterPro:IPR005399"
+ /translation="MVYQPDENRYHTMEYRRCGRSGVKLPAISLGLWHNFGDATRVEN
+ SRALLQRAFDLGITHFDLANNYGPPPGSAECNFGRILQEDFLPWRDELVISTKAGYTM
+ WDGPYGDWGSRKYLIASLDQSLKRMGLEYVDIFYHHRPDPETPLKETMKALDHLVRQG
+ KALYVGISNYPADLARQAIDILEDLGTPCLIHQPKYSLFERWVEDGLLALLQEKGVGS
+ IAFSPLAGGQLTDRYLNGIPEDSRAASGSRFLKPEHITADKLEKVRQLNELAARRGQK
+ LSQMALAWVLRNDNVTSVLIGASKPSQIEDAVGMLANRRFSATECAEIDAILDGRF"
+ misc_feature complement(477163..478101)
+ /locus_tag="SARI_00478"
+ /note="Aldo-keto reductases (AKRs) are a superfamily of
+ soluble NAD(P)(H) oxidoreductases whose chief purpose is
+ to reduce aldehydes and ketones to primary and secondary
+ alcohols. AKRs are present in all phyla and are of
+ importance to both health and industrial...; Region:
+ Aldo_ket_red; cd06660"
+ /db_xref="CDD:119408"
+ misc_feature complement(477157..478065)
+ /locus_tag="SARI_00478"
+ /note="Aldo/keto reductase family; Region: Aldo_ket_red;
+ pfam00248"
+ /db_xref="CDD:215817"
+ misc_feature complement(order(477223..477228,477235..477237,
+ 477250..477261,477310..477312,477466..477483,
+ 477565..477567,477637..477642,477727..477732,
+ 477853..477855,477946..477948,477961..477963,
+ 478045..478053))
+ /locus_tag="SARI_00478"
+ /note="active site"
+ /db_xref="CDD:119408"
+ misc_feature complement(order(477730..477732,477853..477855,
+ 477946..477948,477961..477963))
+ /locus_tag="SARI_00478"
+ /note="catalytic tetrad [active]"
+ /db_xref="CDD:119408"
+ gene 478323..479975
+ /locus_tag="SARI_00479"
+ CDS 478323..479975
+ /locus_tag="SARI_00479"
+ /inference="protein motif:HMMPfam:IPR011766"
+ /inference="protein motif:HMMPfam:IPR012000"
+ /inference="protein motif:HMMPfam:IPR012001"
+ /inference="protein motif:HMMPIR:IPR012110"
+ /inference="protein motif:ScanRegExp:IPR000399"
+ /inference="protein motif:ScanRegExp:IPR000408"
+ /inference="similar to AA sequence:INSD:CAC48239.1"
+ /note="'KEGG: stm:STM2405 2.6e-284 indolepyruvate
+ decarboxylase K01568;
+ COG: COG3961 Pyruvate decarboxylase and related THIamine
+ pyrophosphate-requiring enzymes;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569550.1"
+ /db_xref="GI:161502438"
+ /db_xref="InterPro:IPR000399"
+ /db_xref="InterPro:IPR000408"
+ /db_xref="InterPro:IPR011766"
+ /db_xref="InterPro:IPR012000"
+ /db_xref="InterPro:IPR012001"
+ /db_xref="InterPro:IPR012110"
+ /translation="MQTPYTVADYLLDRLAGCGIGHLFGVPGDYNLQFLDHVIDHPTL
+ RWVGCANELNAAYAADGYARMSGAGALLTTFGVGELSAINGIAGSYAEYVPVLHIVGA
+ PCSAAQQRGELMHHTLGDGDFHHFYRMSQAISAGSAILNEQNACFEIDRVLGEMVAAR
+ RPGYIMLPADVAKKTAIPPIEALTLPAHETQNGVETAFRYRARQCLMNSRRIALLADF
+ LARRFGLRPLLQRWMAETSIAHATLLMGKGLFDEQHPNFVGTYSAGASSKAVRQAIED
+ ADMVICVGTRFVDTLTAGFTQQLPAERTLEIQPYASRIGETWFNLPMAQAVSTLRELC
+ LECAFAPPPTRPVCQPVQIEKGELTQENFWQTLQQYLKPGDIILVDQGTAAFGAAALS
+ LPDGAEVVVQPLWGSIGYSLPAAFGAQTACPDRRVILIIGDGAAQLTIQEMGSMLRDG
+ QAPIILLLNNDGYTVERAIHGAAQRYNDIASWNWTQIPQALNAAQQAECWRVTQAIQL
+ AEVLERLARPQRLSFIEVMLPKADLPELLRTVTRALEARNGG"
+ misc_feature 478335..479945
+ /locus_tag="SARI_00479"
+ /note="indolepyruvate decarboxylase, Erwinia family;
+ Region: indolpyr_decarb; TIGR03393"
+ /db_xref="CDD:132434"
+ misc_feature 478347..478829
+ /locus_tag="SARI_00479"
+ /note="Pyrimidine (PYR) binding domain of pyruvate
+ decarboxylase (PDC), indolepyruvate decarboxylase (IPDC)
+ and related proteins; Region: TPP_PYR_PDC_IPDC_like;
+ cd07038"
+ /db_xref="CDD:132921"
+ misc_feature order(478401..478406,478428..478430,478437..478439,
+ 478470..478475,478551..478553,478572..478574,
+ 478665..478670,478674..478676,478707..478709,
+ 478716..478718)
+ /locus_tag="SARI_00479"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:132921"
+ misc_feature order(478401..478406,478428..478430,478437..478439,
+ 478455..478457,478464..478475,478482..478484,
+ 478491..478496,478500..478502,478506..478508,
+ 478512..478520,478551..478553,478572..478574,
+ 478584..478586,478596..478598,478665..478670)
+ /locus_tag="SARI_00479"
+ /note="PYR/PP interface [polypeptide binding]; other site"
+ /db_xref="CDD:132921"
+ misc_feature order(478401..478403,478476..478478,478551..478553,
+ 478668..478670)
+ /locus_tag="SARI_00479"
+ /note="TPP binding site [chemical binding]; other site"
+ /db_xref="CDD:132921"
+ misc_feature 478923..479267
+ /locus_tag="SARI_00479"
+ /note="Thiamine pyrophosphate enzyme, central domain;
+ Region: TPP_enzyme_M; pfam00205"
+ /db_xref="CDD:215786"
+ misc_feature 479394..479936
+ /locus_tag="SARI_00479"
+ /note="Thiamine pyrophosphate (TPP) family, PDC_IPDC
+ subfamily, TPP-binding module; composed of proteins
+ similar to pyruvate decarboxylase (PDC) and indolepyruvate
+ decarboxylase (IPDC). PDC, a key enzyme in alcoholic
+ fermentation, catalyzes the conversion of...; Region:
+ TPP_PDC_IPDC; cd02005"
+ /db_xref="CDD:238963"
+ misc_feature order(479469..479471,479538..479540,479544..479546,
+ 479616..479627,479700..479702,479706..479720)
+ /locus_tag="SARI_00479"
+ /note="TPP-binding site [chemical binding]; other site"
+ /db_xref="CDD:238963"
+ misc_feature order(479532..479540,479631..479636,479643..479645,
+ 479652..479654,479664..479666,479718..479720,
+ 479730..479732,479745..479750,479760..479762,
+ 479766..479771,479790..479795)
+ /locus_tag="SARI_00479"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238963"
+ gene complement(479995..481287)
+ /locus_tag="SARI_00480"
+ CDS complement(479995..481287)
+ /locus_tag="SARI_00480"
+ /inference="protein motif:HMMPanther:IPR001807"
+ /inference="protein motif:HMMPfam:IPR001807"
+ /inference="similar to AA sequence:REFSEQ:YP_149773.1"
+ /note="'KEGG: cpr:CPR_1400 1.4e-09 chloride channel
+ protein K01529;
+ COG: COG0038 Chloride channel protein EriC;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569551.1"
+ /db_xref="GI:161502439"
+ /db_xref="InterPro:IPR001807"
+ /translation="MPLGRLCKNRYTTPCKEEIMFHPRARAMLLLSIPALIIGVASSL
+ VLIAAMKVASIFQQFLWQRLPASIGIAYDSPFWIVGMLTLTGVVVGLIIRYSPGHAGP
+ DPAIEPLISMPVSPSALPGLLLALIIGLAGGVSLGPEHPIMTINIALAVAFGSRLFPR
+ ITTLDWMILASAGTIGALFGTPVAAALIFSQTLSGSNDVPMWDRLFAPLMAAAAGSLT
+ TSLFFHPHFSLPIAHYTQMRLMDIASGAIVAAIAIAAGMVAVWCLPRLHELLHRLKNP
+ VLILGFGGFILGILGVIGGPLTLFKGLDEMQQMAFSQTLDAGDYFTLAIVKLTALVIA
+ AASGFRGGRIFPAVFIGAALGLMLHAHVETVPAAITVSCAILGLVLVVTRDGWLSLFM
+ ATVVVPDTNLLPLLCIVMLPAWLLLAGKPLLAANRHEP"
+ misc_feature complement(480004..481230)
+ /locus_tag="SARI_00480"
+ /note="Chloride channel protein EriC [Inorganic ion
+ transport and metabolism]; Region: EriC; COG0038"
+ /db_xref="CDD:223116"
+ misc_feature complement(480046..481173)
+ /locus_tag="SARI_00480"
+ /note="CLC voltage-gated chloride channel. The ClC
+ chloride channels catalyse the selective flow of Cl- ions
+ across cell membranes, thereby regulating electrical
+ excitation in skeletal muscle and the flow of salt and
+ water across epithelial barriers. This...; Region:
+ Voltage_gated_ClC; cd00400"
+ /db_xref="CDD:238233"
+ misc_feature complement(order(480250..480264,480865..480876,
+ 480964..480978))
+ /locus_tag="SARI_00480"
+ /note="Cl- selectivity filter; other site"
+ /db_xref="CDD:238233"
+ misc_feature complement(order(480256..480264,480868..480873,
+ 480967..480969,480973..480975))
+ /locus_tag="SARI_00480"
+ /note="Cl- binding residues [ion binding]; other site"
+ /db_xref="CDD:238233"
+ misc_feature complement(480871..480873)
+ /locus_tag="SARI_00480"
+ /note="pore gating glutamate residue; other site"
+ /db_xref="CDD:238233"
+ misc_feature complement(order(480055..480060,480079..480081,
+ 480103..480105,480127..480129,480136..480138,
+ 480637..480639,480658..480660,480712..480714,
+ 480739..480741))
+ /locus_tag="SARI_00480"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238233"
+ gene 481435..482400
+ /gene="glk"
+ /locus_tag="SARI_00481"
+ CDS 481435..482400
+ /gene="glk"
+ /locus_tag="SARI_00481"
+ /inference="protein motif:HMMPfam:IPR003836"
+ /inference="protein motif:HMMTigr:IPR003836"
+ /inference="similar to AA sequence:SwissProt:Q5PNF2"
+ /note="catalyzes the conversion of ATP and D-glucose to
+ ADP and D-glucose 6-phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="glucokinase"
+ /protein_id="YP_001569552.1"
+ /db_xref="GI:161502440"
+ /db_xref="InterPro:IPR003836"
+ /translation="MTKYALVGDVGGTNARLALCDIASGEISQAKTYSGLDYPSLEAV
+ VRVYLDEHSVSVEDGCIAIACPITGDWVAMTNHTWAFSIAEMKKNLGFSHLEIINDFT
+ AVSMAIPMLKKEHLIQFGGGEPVDGKPIAVYGAGTGLGVAHLVHVDKRWISLPGEGGH
+ VDFAPNSEEEAMILEILRAEIGHVSAERVLSGPGLVNLYRAIVKSDNRLPENLRPKDI
+ TARALADSCIDCRRALSLFCVIMGRFGGDLALTLGTFGGVYIAGGIVPRFLEFFKASG
+ FRGGFEDKGRFKDYVHSIPVYLIVHDNPGLLGSGAHLRQTLGHIL"
+ misc_feature 481438..482382
+ /gene="glk"
+ /locus_tag="SARI_00481"
+ /note="glucokinase; Provisional; Region: glk; PRK00292"
+ /db_xref="CDD:234716"
+ misc_feature 481450..482364
+ /gene="glk"
+ /locus_tag="SARI_00481"
+ /note="glucokinase, proteobacterial type; Region: glk;
+ TIGR00749"
+ /db_xref="CDD:129832"
+ gene 482661..482987
+ /locus_tag="SARI_00482"
+ CDS 482661..482987
+ /locus_tag="SARI_00482"
+ /inference="protein motif:HMMPfam:IPR003353"
+ /inference="protein motif:HMMTigr:IPR003353"
+ /inference="similar to AA sequence:INSD:BAA16257.2"
+ /note="'KEGG: sbo:SBO_2413 5.8e-49 putative PTS system
+ enzyme IIB component K02769;
+ COG: COG1445 Phosphotransferase system fructose-specific
+ component IIB;
+ Psort location: extracellular, including cell wall, score:
+ 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569553.1"
+ /db_xref="GI:161502441"
+ /db_xref="InterPro:IPR003353"
+ /translation="MTKKLIAVCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGAD
+ GIQNRLTAQDIAEATLIIHSVAVTPEDNERFESRDVYEITLQDAIKNAAGIIKEIEEM
+ TAAEQP"
+ misc_feature 482673..482963
+ /locus_tag="SARI_00482"
+ /note="PTS_IIB_fructose: subunit IIB of enzyme II (EII) of
+ the fructose-specific phosphoenolpyruvate:carbohydrate
+ phosphotransferase system (PTS). In this system, EII (also
+ referred to as FruAB) is a fructose-specific permease made
+ up of two proteins (FruA and...; Region: PTS_IIB_fructose;
+ cd05569"
+ /db_xref="CDD:99911"
+ misc_feature order(482691..482693,482697..482702,482709..482714)
+ /locus_tag="SARI_00482"
+ /note="active site"
+ /db_xref="CDD:99911"
+ misc_feature order(482691..482702,482706..482714)
+ /locus_tag="SARI_00482"
+ /note="P-loop; other site"
+ /db_xref="CDD:99911"
+ misc_feature 482691..482693
+ /locus_tag="SARI_00482"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:99911"
+ gene 483008..484255
+ /locus_tag="SARI_00483"
+ CDS 483008..484255
+ /locus_tag="SARI_00483"
+ /inference="protein motif:HMMPfam:IPR003352"
+ /inference="protein motif:HMMTigr:IPR006327"
+ /inference="similar to AA sequence:INSD:AAN81375.1"
+ /note="'KEGG: ecc:c2925 3.1e-201 putative PTS system IIC
+ component ypdG K02770;
+ COG: COG1299 Phosphotransferase system, fructose-specific
+ IIC component;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569554.1"
+ /db_xref="GI:161502442"
+ /db_xref="InterPro:IPR003352"
+ /db_xref="InterPro:IPR006327"
+ /translation="MAIKKRSATIVSGVSGAATTIKKTEASRNSFWGELPQHVMSGIS
+ RMVPTLIMGGVILAFSQLIAYSWLDIPADTGIMDALNSGKFAGFNLSLLKFAWLSQSF
+ GGVLFGFAIPMFAAFVANSIGGKLAFPAGFIGGLMSTQPTQVLNFDSASLYWVTSAPV
+ PSTFIGALIISIVAGYLVKWMNQKIQLPDFLLAFKTTFLLPILSAIFVMLAMYYVITP
+ FGGWINGGIRTLLTAAGEKGALMYAMGIAAATAIDLGGPINKAAGFVAFSFTTDHVLP
+ VTARSIAIVIPPIGLGLATLLDRRLTGKRLFNAQLYPQGKTAMFLAFMGISEGAIPFA
+ LESPVTAIPSYMVGAIVGSTFAVWLGAVQWFPESAIWAWPLVSHLSVYIAGILLGAVI
+ TALMVVFLRHMMYRRGKLLIESL"
+ misc_feature 483107..484210
+ /locus_tag="SARI_00483"
+ /note="Phosphotransferase system, fructose-specific IIC
+ component [Carbohydrate transport and metabolism]; Region:
+ FruA; COG1299"
+ /db_xref="CDD:224218"
+ gene 484252..485355
+ /locus_tag="SARI_00484"
+ CDS 484252..485355
+ /locus_tag="SARI_00484"
+ /inference="protein motif:Gene3D:IPR000994"
+ /inference="protein motif:HMMPanther:IPR000994"
+ /inference="protein motif:HMMPfam:IPR000994"
+ /inference="similar to AA sequence:INSD:EAY49463.1"
+ /note="Xaa-Pro aminopeptidase; limited methionine
+ aminopeptidase"
+ /codon_start=1
+ /transl_table=11
+ /product="aminopeptidase"
+ /protein_id="YP_001569555.1"
+ /db_xref="GI:161502443"
+ /db_xref="InterPro:IPR000994"
+ /translation="MKIRTDTMTRLTSLRQWLNERQLDAVLISSRPNKQPHLGISSGS
+ GFVLISRQHAHILVDARYYADVKARANGYCIHLLGGQQRLTSLVNQIISAENLQTVGF
+ EGAQVSWETARRWQTELRATMVSVSIDALRRIKTAAEIDRIREACRIADASAEHIRRF
+ IAPGQSEREIAAELEWFMRQRGAEKAAFDTIVASGWRGALPHGKASDKIVAAGEWITL
+ DFGALYQGYCSDMTRTFLISGAGAPQEHPLFPIYHIVLEAQLAAIAAIRPGVRCLAVD
+ AAARDVIERAGYGEFFAHNTGHSIGIEVHEEPRFSPDDNTVLAPGMLLTVEPGIYLPE
+ QGGVRIEDVVLVTPEGAEVLYSMPKTVLLTGVA"
+ misc_feature 484273..485352
+ /locus_tag="SARI_00484"
+ /note="aminopeptidase; Provisional; Region: PRK09795"
+ /db_xref="CDD:182080"
+ misc_feature 484279..484653
+ /locus_tag="SARI_00484"
+ /note="Creatinase/Prolidase N-terminal domain; Region:
+ Creatinase_N; pfam01321"
+ /db_xref="CDD:216431"
+ misc_feature 484669..485304
+ /locus_tag="SARI_00484"
+ /note="Similar to Prolidase and Aminopeptidase P. The
+ members of this subfamily presumably catalyse hydrolysis
+ of Xaa-Pro dipeptides and/or release of any N-terminal
+ amino acid, including proline, that is linked with
+ proline; Region: APP-like; cd01092"
+ /db_xref="CDD:238525"
+ misc_feature order(484855..484857,484906..484908,484939..484941,
+ 485143..485145,485230..485232,485272..485274)
+ /locus_tag="SARI_00484"
+ /note="active site"
+ /db_xref="CDD:238525"
+ gene 485352..486395
+ /locus_tag="SARI_00485"
+ CDS 485352..486395
+ /locus_tag="SARI_00485"
+ /inference="protein motif:HMMPfam:IPR008007"
+ /inference="similar to AA sequence:INSD:EAY49462.1"
+ /note="metalloprotein"
+ /codon_start=1
+ /transl_table=11
+ /product="exoaminopeptidase"
+ /protein_id="YP_001569556.1"
+ /db_xref="GI:161502444"
+ /db_xref="InterPro:IPR008007"
+ /translation="MMDLSLLKALCEADAIAASEQEVRQILLDEADRLHKEVRFDGLG
+ SVLIRLNASDGPKVMICAHMDEVGFMVRSISGEGAIDVLPVGNVRMAARQLQPVRITT
+ REECKIPGLLEGERSGNEVSGLRVDIGARSHDEVIQAGIRPGDRVTFDSAFQVLPHQR
+ VMGKAFDDRLGCYLLIALLREWHDAELPAEIWLAASSSEEVGLRGGQTAARAIAPDLA
+ IVLDTACWAKNFDYGAANHRQIGQGPMLVLSDKSLIAPPKLTAWIESIAAQAGIPLQL
+ DMFSNGGTDGGVVHLSGTGIPTVVLGPATRHGHCAASIADCRDILQTQQLLSALITGF
+ TRDTVARLTDFRC"
+ misc_feature 485355..486386
+ /locus_tag="SARI_00485"
+ /note="exoaminopeptidase; Provisional; Region: PRK09961"
+ /db_xref="CDD:182170"
+ misc_feature 485364..486341
+ /locus_tag="SARI_00485"
+ /note="M42 Peptidases, also known as glutamyl
+ aminopeptidase family; Region: M42; cd05638"
+ /db_xref="CDD:193517"
+ misc_feature order(485400..485408,485421..485423,485433..485435,
+ 485469..485474,485481..485483,485559..485567,
+ 485598..485600,485634..485642,485673..485678,
+ 485682..485684,485724..485726,485730..485738,
+ 485778..485783,485811..485813,485817..485819,
+ 485829..485831,485835..485837,485961..485963,
+ 485970..485975,486069..486077,486093..486095,
+ 486141..486143,486183..486185,486219..486221,
+ 486267..486272,486279..486281,486291..486293)
+ /locus_tag="SARI_00485"
+ /note="oligomer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:193517"
+ misc_feature order(485538..485540,485850..485852,485946..485951,
+ 485958..485960,486015..486026,486186..486188,
+ 486195..486200,486273..486278)
+ /locus_tag="SARI_00485"
+ /note="active site"
+ /db_xref="CDD:193517"
+ misc_feature order(485538..485540,485850..485852,485946..485951,
+ 486015..486017,486276..486278)
+ /locus_tag="SARI_00485"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:193517"
+ gene 486417..488912
+ /locus_tag="SARI_00486"
+ CDS 486417..488912
+ /locus_tag="SARI_00486"
+ /inference="protein motif:BlastProDom:IPR000032"
+ /inference="protein motif:BlastProDom:IPR000121"
+ /inference="protein motif:BlastProDom:IPR002178"
+ /inference="protein motif:Gene3D:IPR000032"
+ /inference="protein motif:Gene3D:IPR002178"
+ /inference="protein motif:HMMPfam:IPR000032"
+ /inference="protein motif:HMMPfam:IPR000121"
+ /inference="protein motif:HMMPfam:IPR002178"
+ /inference="protein motif:HMMPfam:IPR008279"
+ /inference="protein motif:HMMPfam:IPR008731"
+ /inference="protein motif:HMMTigr:IPR004715"
+ /inference="protein motif:HMMTigr:IPR006318"
+ /inference="protein motif:ScanRegExp:IPR000121"
+ /inference="protein motif:superfamily:IPR000032"
+ /inference="protein motif:superfamily:IPR008279"
+ /inference="protein motif:superfamily:IPR008731"
+ /note="'KEGG: sfx:S2588 0. putative PTS system enzyme IIA
+ component, enzyme I K02766:K02768;
+ COG: COG1762 Phosphotransferase system
+ mannitol/fructose-specific IIA domain (Ntr-type);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569557.1"
+ /db_xref="GI:161502445"
+ /db_xref="InterPro:IPR000032"
+ /db_xref="InterPro:IPR000121"
+ /db_xref="InterPro:IPR002178"
+ /db_xref="InterPro:IPR004715"
+ /db_xref="InterPro:IPR006318"
+ /db_xref="InterPro:IPR008279"
+ /db_xref="InterPro:IPR008731"
+ /translation="MLTIEFLCPLPNGIHARPAWELKEQCSQWQSDITFINRRQNVRA
+ DAKSSLALIGTGTLFNDSCMLNISGRDEEQAKRSLEVWLAHHFIDSDSVQPGPAELAA
+ RPLPRSLLRLNPDLLYGDVLASGVGEGMLTLWQSDNLEGYRTIPASAEDLTRLENSLA
+ TLAEQLNQQLRERDGESKTILSAHLSLIQDDEFAGNIRRLMVERHLALGAAIIANMEQ
+ VCSQLSASASDYLRERVSDIRDISEQLLHITWPEKQPRNALVLTRPTILVAEDLTPSQ
+ FLSLDLQYLSGMILEKTGRTSHTLILARASAIPVLSGLSAEAIGRYATRPAVLDAQCG
+ VLAINPNSSVRGYYAVAEKLADKRQQRQACDAALLACTQDNQRIDIAANIGTALEAPG
+ AFSNGAEGIGLFRTEMLFMDRDSAPDEQEQFEAYQQVLLAAGEKPVIFRTMDIGGDKN
+ IRYLNIPQEDNPFLGYRAVRIYPEFSGLFRTQLRAILRAAVFGHAQLMIPMVHSLDQI
+ LWVKSELKKAIAELKEERLRHAQDIPLGIMVEVPSVCYIIDHFCDEVDFFSIGSNDMT
+ QYLYAVDRNNPRVSPLYNPITPSFLRMLRQIIHVAHERGKWVGICGELGGESRYLPLL
+ LGLGLDELSMSSPRIPAVKSQLRHLDSQACRTLARQACECRSAQEIEALLNQFAPEKE
+ VRPLLALENIFVGEPLNNKEQVIQFLCGNLGVNGRTEHPFELEEDVWQREEIVTTAVG
+ FGVAIPHTKSQWIRHSSISIARLAQPVDWQSEMGDVELVIMLTLGADEGINHVKVFSQ
+ LARKLVNKNFRQSLFAASDTDSILALLEAELTF"
+ misc_feature 486429..486656
+ /locus_tag="SARI_00486"
+ /note="Histidine-containing phosphocarrier protein
+ (HPr)-like proteins. HPr is a central component of the
+ bacterial phosphoenolpyruvate sugar phosphotransferase
+ system (PTS). The PTS catalyses the phosphorylation of
+ sugar substrates during their translocation...; Region:
+ PTS-HPr_like; cd00367"
+ /db_xref="CDD:238217"
+ misc_feature 486429..486440
+ /locus_tag="SARI_00486"
+ /note="dimerization domain swap beta strand [polypeptide
+ binding]; other site"
+ /db_xref="CDD:238217"
+ misc_feature order(486456..486458,486462..486467,486471..486476,
+ 486486..486488,486495..486497,486555..486566,
+ 486573..486578)
+ /locus_tag="SARI_00486"
+ /note="regulatory protein interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:238217"
+ misc_feature 486459..486461
+ /locus_tag="SARI_00486"
+ /note="active site"
+ /db_xref="CDD:238217"
+ misc_feature 486558..486560
+ /locus_tag="SARI_00486"
+ /note="regulatory phosphorylation site [posttranslational
+ modification]; other site"
+ /db_xref="CDD:238217"
+ misc_feature 486783..488459
+ /locus_tag="SARI_00486"
+ /note="Phosphoenolpyruvate-protein kinase (PTS system EI
+ component in bacteria) [Carbohydrate transport and
+ metabolism]; Region: PtsA; COG1080"
+ /db_xref="CDD:224006"
+ misc_feature 486783..487121
+ /locus_tag="SARI_00486"
+ /note="PEP-utilising enzyme, N-terminal; Region:
+ PEP-utilisers_N; pfam05524"
+ /db_xref="CDD:218623"
+ misc_feature 487197..>487361
+ /locus_tag="SARI_00486"
+ /note="PEP-utilising enzyme, mobile domain; Region:
+ PEP-utilizers; pfam00391"
+ /db_xref="CDD:201201"
+ misc_feature 487491..488366
+ /locus_tag="SARI_00486"
+ /note="PEP-utilising enzyme, TIM barrel domain; Region:
+ PEP-utilizers_C; pfam02896"
+ /db_xref="CDD:217274"
+ misc_feature 488484..488891
+ /locus_tag="SARI_00486"
+ /note="PTS_IIA, PTS system, fructose/mannitol specific IIA
+ subunit. The bacterial phosphoenolpyruvate: sugar
+ phosphotransferase system (PTS) is a multi-protein system
+ involved in the regulation of a variety of metabolic and
+ transcriptional processes. This...; Region: PTS_IIA_fru;
+ cd00211"
+ /db_xref="CDD:238129"
+ misc_feature order(488607..488609,488655..488657)
+ /locus_tag="SARI_00486"
+ /note="active site"
+ /db_xref="CDD:238129"
+ misc_feature 488655..488657
+ /locus_tag="SARI_00486"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238129"
+ gene complement(489017..489871)
+ /locus_tag="SARI_00487"
+ CDS complement(489017..489871)
+ /locus_tag="SARI_00487"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR000005"
+ /inference="protein motif:HMMSmart:IPR000005"
+ /inference="protein motif:ScanRegExp:IPR000005"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="protein motif:superfamily:IPR011051"
+ /inference="similar to AA sequence:INSD:CAJ31227.1"
+ /note="'KEGG: bat:BAS3585 3.1e-08 Ada regulatory
+ protein/6-O-methylguanine-DNA methyltransferase K00567;
+ COG: COG2207 AraC-type DNA-binding domain-containing
+ proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569558.1"
+ /db_xref="GI:161502446"
+ /db_xref="InterPro:IPR000005"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR011051"
+ /db_xref="InterPro:IPR012287"
+ /translation="MNKSDLPADQQFFADLFSGLVLNPHQLGRVWFASHPSTLPSGSL
+ CIDLPRLDIVLRGEYGNQLEKTQRRLTEGEMLFIPARAANLPVSDKPVMLLSLVFAPS
+ WLGLSFYENRTASLLRPVRRIELPHLQRGEGEAMLTALTHLSRSPQEQNIIQPLVLSL
+ LHLCRNVVNTRPDIYRPRTEFLYQSICNWVQDNYAQPLSRESVAQFFNITANHLSRLF
+ TQHGTMSFVEYVRWVRMAKARIVLQKYHLPINEVALRCGYQDSDYFCRLFRRQFGLTP
+ GDYGARFQ"
+ misc_feature complement(489035..489283)
+ /locus_tag="SARI_00487"
+ /note="helix_turn_helix, arabinose operon control protein;
+ Region: HTH_ARAC; smart00342"
+ /db_xref="CDD:197666"
+ misc_feature complement(489035..489133)
+ /locus_tag="SARI_00487"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ gene 490457..491695
+ /locus_tag="SARI_00488"
+ CDS 490457..491695
+ /locus_tag="SARI_00488"
+ /inference="protein motif:HMMPfam:IPR004839"
+ /inference="similar to AA sequence:INSD:AAX66311.1"
+ /note="'KEGG: stm:STM2402 4.1e-222 yfdZ; putative
+ aminotransferase;
+ COG: COG0436 Aspartate/tyrosine/aromatic aminotransferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="aminotransferase"
+ /protein_id="YP_001569559.1"
+ /db_xref="GI:161502447"
+ /db_xref="InterPro:IPR004839"
+ /translation="MADFRPDRRFTRIDRLPPYVFNITAELKMAARRRGEDIIDFSMG
+ NPDGATPPHIVEKLCTVAQRPDTHGYSTSRGIPRLRRAISHWYQERYDVDIDPETEAI
+ VTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNE
+ LERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVY
+ DGWKAPSIMQVPGARDVAVEFFTLSKSYNMAGWRIGFMVGNKTLVSALARIKSYHDYG
+ TFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLYEAGWMVEMPKASMYVWAKI
+ PEQYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAVRGIKA
+ MFRADGVLPSHPKPVEASTE"
+ misc_feature 490478..491659
+ /locus_tag="SARI_00488"
+ /note="aminotransferase; Validated; Region: PRK08175"
+ /db_xref="CDD:181268"
+ misc_feature 490571..491632
+ /locus_tag="SARI_00488"
+ /note="Aspartate aminotransferase family. This family
+ belongs to pyridoxal phosphate (PLP)-dependent aspartate
+ aminotransferase superfamily (fold I). Pyridoxal phosphate
+ combines with an alpha-amino acid to form a compound
+ called a Schiff base or aldimine...; Region: AAT_like;
+ cd00609"
+ /db_xref="CDD:99734"
+ misc_feature order(490772..490780,490850..490852,491000..491002,
+ 491093..491095,491177..491179,491183..491188,
+ 491210..491212)
+ /locus_tag="SARI_00488"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:99734"
+ misc_feature order(490781..490783,490880..490882,491072..491074,
+ 491204..491212,491297..491299,491306..491308)
+ /locus_tag="SARI_00488"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99734"
+ misc_feature 491186..491188
+ /locus_tag="SARI_00488"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:99734"
+ gene complement(492218..493138)
+ /locus_tag="SARI_00489"
+ CDS complement(492218..493138)
+ /locus_tag="SARI_00489"
+ /inference="protein motif:HMMPfam:IPR004960"
+ /inference="protein motif:HMMTigr:IPR011920"
+ /inference="similar to AA sequence:REFSEQ:NP_456943.1"
+ /note="Acylates the intermediate (KDO)2-lipid IVA to form
+ (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold
+ shock"
+ /codon_start=1
+ /transl_table=11
+ /product="lipid A biosynthesis palmitoleoyl
+ acyltransferase"
+ /protein_id="YP_001569560.1"
+ /db_xref="GI:161502448"
+ /db_xref="InterPro:IPR004960"
+ /db_xref="InterPro:IPR011920"
+ /translation="MFPQSKFSRAFLHPRYWLTWFGVGVLWLLVQLPYPVLRFLGTRT
+ GKLARPFLKRRESIAQKNIELCFPALSWEEREKLLAENFHSLGMALLETGMAWFWPDS
+ RVRKWFDVDGLDNLTRAQAQNRGVMVVGVHFMSLELGGRVMGLCQPMMATYRPHNNPL
+ MEWVQTRGRMRSNKAMIGRNNLRGIVGALKKGEAVWFAPDQDYGPKGSSFAPFFAVEN
+ VATTNGTYVLSRLSGAAMLTVTMVRKTDNSGYRLYITPEMEGYPADENQAAAYMNKII
+ EKEIMRAPEQYLWIHRRFKTRPLGEASLYI"
+ misc_feature complement(492251..493123)
+ /locus_tag="SARI_00489"
+ /note="Bacterial lipid A biosynthesis acyltransferase;
+ Region: Lip_A_acyltrans; pfam03279"
+ /db_xref="CDD:112109"
+ misc_feature complement(492254..492826)
+ /locus_tag="SARI_00489"
+ /note="Lysophospholipid Acyltransferases (LPLATs) of
+ Glycerophospholipid Biosynthesis: LABLAT-like; Region:
+ LPLAT_LABLAT-like; cd07984"
+ /db_xref="CDD:153246"
+ misc_feature complement(order(492530..492538,492671..492682,
+ 492728..492730,492734..492736,492743..492745))
+ /locus_tag="SARI_00489"
+ /note="putative acyl-acceptor binding pocket; other site"
+ /db_xref="CDD:153246"
+ gene 493719..493961
+ /locus_tag="SARI_00490"
+ CDS 493719..493961
+ /locus_tag="SARI_00490"
+ /inference="similar to AA sequence:INSD:AAL21300.1"
+ /note="'COG: NOG13898 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569561.1"
+ /db_xref="GI:161502449"
+ /translation="MIYLWTFLVISILAVSCYIGQVMGAFSAVSSFTGMVILVALIYL
+ LNVWLQDGDEIGSGLLLFLSPACGLIIRFMVGYGKR"
+ misc_feature 493719..493958
+ /locus_tag="SARI_00490"
+ /note="Protein of unknown function (DUF2545); Region:
+ DUF2545; pfam10810"
+ /db_xref="CDD:151260"
+ gene complement(493923..494048)
+ /locus_tag="SARI_00491"
+ CDS complement(493923..494048)
+ /locus_tag="SARI_00491"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569562.1"
+ /db_xref="GI:161502450"
+ /translation="MPMRNNRLAFPGKISADVIGAIYLLTLCMLTLAVPYHKAND"
+ gene complement(494032..495339)
+ /locus_tag="SARI_00492"
+ CDS complement(494032..495339)
+ /locus_tag="SARI_00492"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="protein motif:HMMTigr:IPR000849"
+ /inference="protein motif:ScanRegExp:IPR000849"
+ /inference="similar to AA sequence:REFSEQ:YP_217387.1"
+ /note="'KEGG: dre:30298 1.7e-05 jak2b; Janus kinase 2b
+ K04447;
+ COG: COG2271 Sugar phosphate permease;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569563.1"
+ /db_xref="GI:161502451"
+ /db_xref="InterPro:IPR000849"
+ /db_xref="InterPro:IPR011701"
+ /translation="MQALLSVFLGYLAYYIVRNNFTLSTPYLKEQLDLSATQIGLLSS
+ CMLIAYGISKGVMSSLADKASPKVFMACGLVLCAIVNVGLGFSGAFLIFAALVVFNGL
+ FQGMGVGPSFIIIANWFPRRERGRVGAFWNISHNVGGGIVAPIVGTAFAILGSEHWQS
+ ASYIVPACVAVIFALVVLLLGKGSPREEGLPSLEQMIPEEKIILKTKNTAKAPENMSA
+ FQIFCTYVLRNKNAWYISLVDVFVYMVRFGMISWLPIYLLTVKHFSKEQMSVAFLSFE
+ WVAVLSTLLAGWLSDKLFKGRRMPLAMICMALIFVCLIGYWKSESLVMVTIFAAIVGC
+ LIYVPQFQASVQKMEIVPGFAVGSAVGLRGFMSYIFGASLGTSLFGVMVDKLGWYGGF
+ YLLMGGIVCCILFCYLFHRGALELERQRHALHNQDSLQLADAQ"
+ misc_feature complement(494077..495339)
+ /locus_tag="SARI_00492"
+ /note="Sugar phosphate permease [Carbohydrate transport
+ and metabolism]; Region: UhpC; COG2271"
+ /db_xref="CDD:225180"
+ misc_feature complement(<494866..495330)
+ /locus_tag="SARI_00492"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature complement(order(494920..494922,494941..494946,
+ 494953..494958,494992..494994,495001..495006,
+ 495013..495018,495025..495030,495166..495171,
+ 495175..495180,495190..495192,495199..495204,
+ 495211..495213,495262..495267,495271..495279,
+ 495286..495288))
+ /locus_tag="SARI_00492"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ misc_feature complement(494113..>494643)
+ /locus_tag="SARI_00492"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ gene 495761..496165
+ /locus_tag="SARI_00493"
+ CDS 495761..496165
+ /locus_tag="SARI_00493"
+ /inference="similar to AA sequence:REFSEQ:YP_217386.1"
+ /note="'COG: COG1840 ABC-type Fe3+ transport system,
+ periplasmic component;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569564.1"
+ /db_xref="GI:161502452"
+ /translation="MSIFMNGITNRFFPCCSRFARVSGFTLWLAAMLVSCQAYSCELV
+ MATTFSPGATAWIIQRWQTEPGSVMIRTLNRTSGSLEQLLDTANAEDVDLILTSSPML
+ LQHLQEHQKLALFDSAPAASQKLVPRSIRSTY"
+ gene 496150..497068
+ /locus_tag="SARI_00494"
+ /note="Pseudogene compared to gi|16765722|ref|NP_461337.1|
+ activator [Salmonella typhimurium LT2]"
+ gene 497337..498275
+ /locus_tag="SARI_00495"
+ CDS 497337..498275
+ /locus_tag="SARI_00495"
+ /inference="protein motif:BlastProDom:IPR000036"
+ /inference="protein motif:FPrintScan:IPR000036"
+ /inference="protein motif:HMMPfam:IPR000036"
+ /inference="protein motif:ScanRegExp:IPR000036"
+ /inference="protein motif:ScanRegExp:IPR002048"
+ /inference="similar to AA sequence:REFSEQ:YP_217383.1"
+ /note="outer membrane protease; involved in virulence in
+ many organisms; OmpT; IcsP; SopA; Pla; PgtE; omptin; in
+ Escherichia coli OmpT can degrade antimicrobial peptides;
+ in Yersinia Pla activates plasminogen during infection; in
+ Shigella flexneria SopA cleaves the autotransporter IcsA"
+ /codon_start=1
+ /transl_table=11
+ /product="outer membrane protease"
+ /protein_id="YP_001569565.2"
+ /db_xref="GI:228879508"
+ /db_xref="InterPro:IPR000036"
+ /db_xref="InterPro:IPR002048"
+ /translation="MKTHVIAVMIIAVFSESVYAESTLFIPDFSPDSVTTSLSAGVLN
+ GKSRELVYDIDTGRKLSQLDWKIKNVAILQGDLSWDPYSFVTLNARGWTSLASGSGHL
+ VDRDWMNSEQSGWTDRSIHPDTSVNHANEYDLNVKGWLLQGDNFKAGVTAGYQETRFS
+ WTARGGSYSYDNGQYIGNFPPGKRVIGYSQRFEMPYIGLAGHYRINDFEGNVMFKYSD
+ WVHAHDNDEHYMRKLTFREKTGSSRYYGASVNAGYYITNNAKIFAEFAYSKYEEGKGG
+ TQIIDKTSGDSEYFGGDVAGIANNNYTVTAGLQYRF"
+ misc_feature 497337..498272
+ /locus_tag="SARI_00495"
+ /note="outer membrane protease; Reviewed; Region:
+ PRK10993"
+ /db_xref="CDD:236813"
+ gene complement(498455..499575)
+ /locus_tag="SARI_00496"
+ /note="Pseudogene compared to gi|16764594|ref|NP_460209.1|
+ putative cytoplasmic protein [Salmonella typhimurium LT2]"
+ gene complement(499674..499892)
+ /locus_tag="SARI_00497"
+ CDS complement(499674..499892)
+ /locus_tag="SARI_00497"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569566.1"
+ /db_xref="GI:161502454"
+ /translation="MKKFDCNSFLYDVQFGDFLKVSRGVYCYDNVLIKSYDLLTSNTG
+ QLKYFYENISIFYLYFYKAVIERKNAKM"
+ gene 500499..500741
+ /locus_tag="SARI_00498"
+ CDS 500499..500741
+ /locus_tag="SARI_00498"
+ /inference="protein motif:HMMPfam:IPR001584"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:REFSEQ:NP_085444.1"
+ /note="'COG: COG2801 Transposase and inactivated
+ derivatives;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569567.1"
+ /db_xref="GI:161502455"
+ /db_xref="InterPro:IPR001584"
+ /db_xref="InterPro:IPR012337"
+ /translation="MSRRGNCWDNSLMDRFFRSLKNEWMPVTGYINFSEAAHAITNII
+ VGYYSSLRPHEYNGGLPPNESEYRYWKNSKAVASFR"
+ misc_feature 500499..500684
+ /locus_tag="SARI_00498"
+ /note="Integrase core domain; Region: rve_3; cl15866"
+ /db_xref="CDD:247111"
+ gene 501213..501725
+ /locus_tag="SARI_00499"
+ CDS 501213..501725
+ /locus_tag="SARI_00499"
+ /inference="protein motif:HMMPfam:IPR005119"
+ /inference="similar to AA sequence:REFSEQ:YP_049192.1"
+ /note="'COG: COG0583 Transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569568.1"
+ /db_xref="GI:161502456"
+ /db_xref="InterPro:IPR005119"
+ /translation="MLSYDIVAAVKNQMANLGIVADSTQLNGLASLPFSYDELVVFAP
+ AKGRWHDTESTTFEEIVAAEFIGLSEGSALQEHIEDHAKKLGRRLNYRVRMTTFDAMM
+ QIVSSGVGIAIIPKHAAERYYHHHNYKIIRLSERWADRKLIFCARDFADLPDYIKEVV
+ DFLAQPPVDS"
+ misc_feature <501213..501707
+ /locus_tag="SARI_00499"
+ /note="Transcriptional regulator [Transcription]; Region:
+ LysR; COG0583"
+ /db_xref="CDD:223656"
+ misc_feature 501216..501701
+ /locus_tag="SARI_00499"
+ /note="The substrate binding domain of LysR-type
+ transcriptional regulators (LTTRs), a member of the type 2
+ periplasmic binding fold protein superfamily; Region:
+ PBP2_LTTR_substrate; cl11398"
+ /db_xref="CDD:245600"
+ gene complement(501729..502434)
+ /locus_tag="SARI_00500"
+ /pseudogene="unknown"
+ gene 502717..503895
+ /locus_tag="SARI_00502"
+ CDS 502717..503895
+ /locus_tag="SARI_00502"
+ /inference="protein motif:Gene3D:IPR006091"
+ /inference="protein motif:Gene3D:IPR013764"
+ /inference="protein motif:Gene3D:IPR013786"
+ /inference="protein motif:HMMPfam:IPR006091"
+ /inference="protein motif:HMMPfam:IPR013107"
+ /inference="protein motif:superfamily:IPR009075"
+ /inference="protein motif:superfamily:IPR009100"
+ /inference="similar to AA sequence:INSD:CAG67369.1"
+ /note="'KEGG: bur:Bcep18194_C7499 2.4e-91 acyl-CoA
+ dehydrogenase K00253;
+ COG: COG1960 Acyl-CoA dehydrogenases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569571.1"
+ /db_xref="GI:161502459"
+ /db_xref="InterPro:IPR006091"
+ /db_xref="InterPro:IPR009075"
+ /db_xref="InterPro:IPR009100"
+ /db_xref="InterPro:IPR013107"
+ /db_xref="InterPro:IPR013764"
+ /db_xref="InterPro:IPR013786"
+ /translation="MKSMISPQLSKLLSDANDIAQWLRHSASERDQTRHISTEQVDAY
+ ASSGLWAVTVPKEYGGPDLGYKVLSQITRLIAAADPSIAQIPRGHFHIIDLLKAVALP
+ SQKMFFFREILAGKKFAQAASEIGGKNVADIQTMLTQERGGWRLNGKKYYATGCIHAD
+ WIGIVAKDDIGVFMHAFVPKDAPGMDIKADWSGFGQKVTASGTVLLNDVVVNEEHIIP
+ FTEAFLDVHPIGAVSQLIHASIDIGIARESIDETIKYIRQTARPWIDSGVEQASDDPY
+ LISGVGDLEIRYAAAVAMLDQVAGELDETVISTDADLARLSVRVGIAKVLANDIALLA
+ SNKLFEFAGTSSTRESLNLHRHWRNARTHTLHDPVRWKVNAIGQYYLNGVYPKRHNYI
+ "
+ misc_feature 502756..503874
+ /locus_tag="SARI_00502"
+ /note="Acyl-CoA dehydrogenase; Region: ACAD; cl09933"
+ /db_xref="CDD:245208"
+ misc_feature 502762..503892
+ /locus_tag="SARI_00502"
+ /note="sulfur acquisition oxidoreductase, SfnB family;
+ Region: sulfur_SfnB; TIGR04022"
+ /db_xref="CDD:188537"
+ misc_feature order(502987..502989,503074..503076,503080..503082,
+ 503170..503172,503176..503178,503821..503829,
+ 503833..503835,503839..503841)
+ /locus_tag="SARI_00502"
+ /note="active site"
+ /db_xref="CDD:173838"
+ gene complement(503906..504076)
+ /locus_tag="SARI_00503"
+ CDS complement(503906..504076)
+ /locus_tag="SARI_00503"
+ /note="'COG: COG2963 Transposase and inactivated
+ derivatives;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569572.1"
+ /db_xref="GI:161502460"
+ /translation="MWFFLIYWLMWSCELPRSGKPHTPELRQEALKLAEHIGVTAAAG
+ DLCLYESQPYAG"
+ gene 504246..504656
+ /locus_tag="SARI_00504"
+ CDS 504246..504656
+ /locus_tag="SARI_00504"
+ /inference="similar to AA sequence:REFSEQ:ZP_01649190.1"
+ /note="'KEGG: fra:Francci3_3275 7.1e-16 L-lysine
+ 6-monooxygenase (NADPH) K03897;
+ COG: COG3486 Lysine/orniTHIne N-monooxygenase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569573.1"
+ /db_xref="GI:161502461"
+ /translation="MACYSEYFSKLLLHLCQKNNRENILTSDGISGAMLRAIYQKLYC
+ LQFITPGELEFDLMTSRSVSNVVQTPSGRCRVYYKHPDVERAEHIEADIIILATDYVA
+ AEKNLLNGLKERIHYENDVFVIDDDFAIVWVGPR"
+ misc_feature <504246..504602
+ /locus_tag="SARI_00504"
+ /note="Lysine/ornithine N-monooxygenase [Secondary
+ metabolites biosynthesis, transport, and catabolism];
+ Region: IucD; COG3486"
+ /db_xref="CDD:226017"
+ gene complement(505191..505262)
+ /locus_tag="SARI_00505"
+ tRNA complement(505191..505262)
+ /locus_tag="SARI_00505"
+ /product="tRNA-Arg"
+ gene complement(505338..506279)
+ /locus_tag="SARI_00506"
+ CDS complement(505338..506279)
+ /locus_tag="SARI_00506"
+ /inference="similar to AA sequence:INSD:CAD07625.1"
+ /note="'KEGG: psp:PSPPH_4690 8.2e-10 formate transporter
+ K00122;
+ COG: COG2116 Formate/nitrite family of transporters;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569574.1"
+ /db_xref="GI:161502462"
+ /translation="MDSLNNDKIKQHSSDLEVESEEKQSGKEIEVDEDRLPSRAMAIH
+ EHIRQDGEKEMERDAMALLWSAIAAGLSMGASLLAKGVFHVQLAGVPGGFLLENLGYT
+ FGFIIVIMARQQLFTENTVTAVLPVMQNLTLSNVGLLMRLWGVVLLGNLIGTGVAAWA
+ FEYMPIFDEETRDAFVKIGMEVMKNSPTEMFANAIISGWIIATMVWMFPAAGGAKIVV
+ IILMTWLIALGDTTHIVVGSVEILYLVFNGALPWHDFIWPFALPTLAGNICGGTFIFA
+ LMSHAQIRNDMSNKRKEEARLRGERIEKARKKEEKQC"
+ misc_feature complement(505407..506192)
+ /locus_tag="SARI_00506"
+ /note="Formate/nitrite family of transporters [Inorganic
+ ion transport and metabolism]; Region: FocA; COG2116"
+ /db_xref="CDD:225027"
+ gene 506472..507323
+ /locus_tag="SARI_00507"
+ CDS 506472..507323
+ /locus_tag="SARI_00507"
+ /inference="protein motif:FPrintScan:IPR007428"
+ /inference="protein motif:HMMPfam:IPR007428"
+ /inference="similar to AA sequence:INSD:AAV76474.1"
+ /note="'COG: COG2853 Surface lipoprotein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569575.1"
+ /db_xref="GI:161502463"
+ /db_xref="InterPro:IPR007428"
+ /translation="MLLKSLTPKQADTVAFRHGWQSAIAIIYRETFMKLRLSALALGT
+ TLLVGCASSGTEQQGRSDPFEGFNRTMYNFNFNVLDPYVVRPVAVAWRDYVPQPARNG
+ LSNFTGNLEEPAIMVNYFLQGDPYQGMVHFTRFFLNTLLGMGGFVDVAGMANPKLQRV
+ EPHRFGSTLGHYGVGYGPYVQLPFYGSFTLREDGGDMADTLYPVLSWLTWPMSVGKWA
+ IEGIETRAQLLDSDGLLRQSSDPYIMVREAYFQRHDFIANGGKLKPQENPNAQEIQDE
+ LKEIDSE"
+ misc_feature 506568..507320
+ /locus_tag="SARI_00507"
+ /note="ABC transporter outer membrane lipoprotein;
+ Provisional; Region: PRK15091"
+ /db_xref="CDD:185047"
+ gene complement(507384..508697)
+ /locus_tag="SARI_00508"
+ CDS complement(507384..508697)
+ /locus_tag="SARI_00508"
+ /inference="protein motif:HMMPfam:IPR005017"
+ /inference="similar to AA sequence:INSD:AAV76475.1"
+ /note="'COG: COG2067 Long-chain fatty acid transport
+ protein;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="long-chain fatty acid outer membrane
+ transporter"
+ /protein_id="YP_001569576.1"
+ /db_xref="GI:161502464"
+ /db_xref="InterPro:IPR005017"
+ /translation="MVMSQKTLFTKSALAVAVAIISTQAWSAGFQLNEFSSSGLGRAY
+ SGEGAIADDAGNVSRNPALITMFDRPTFSAGAVYIDPDVNISGTSPSGRTLDADNIAP
+ TAWVPNVHFVAPINDQFGWGASITSNYGLATEFNDTYAGGSVGGTTDLETMNLNLSGA
+ YRLNDAWSFGLGFDAVYARAKIERYAGDLGQLIAAQSPALAPIASRIPSDTKIAHLNG
+ NQWGFGWNAGILYELDKNNRYALTYRSEVKIDFKGNYSSDLPLVVNNYNLPIPTATAG
+ ATQSGYLTLNLPEMWEVSGYNRVAPQWAIHYSLAYTSWSQFQQLKAKSTAGDTLFEKH
+ EGFKDAYRIALGTTYYYDDNWTFRTGIAFDDSPVPAQNRSISIPDQDRFWLSAGTTYA
+ FNKDASVDVGVSYMHGQSVKINEGPYQFESEGKAWLFGTNFNYAF"
+ misc_feature complement(507387..508691)
+ /locus_tag="SARI_00508"
+ /note="long-chain fatty acid outer membrane transporter;
+ Provisional; Region: PRK10716"
+ /db_xref="CDD:236741"
+ gene 509062..509346
+ /locus_tag="SARI_00509"
+ CDS 509062..509346
+ /locus_tag="SARI_00509"
+ /inference="protein motif:HMMPfam:IPR005272"
+ /inference="protein motif:HMMTigr:IPR005272"
+ /inference="similar to AA sequence:REFSEQ:NP_456931.1"
+ /note="'COG: COG3691 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569577.2"
+ /db_xref="GI:448236197"
+ /db_xref="InterPro:IPR005272"
+ /translation="MSKCSADETPVCCCMDVGTIMDNSDCTASYSRVFATRAEAEETL
+ AALTEKARSVESEPCQITPTFTEESDGVRLDIDFVFACEAETLIFQLGLR"
+ misc_feature 509062..509343
+ /locus_tag="SARI_00509"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG3691"
+ /db_xref="CDD:226215"
+ gene 509522..510832
+ /gene="fadI"
+ /locus_tag="SARI_00510"
+ CDS 509522..510832
+ /gene="fadI"
+ /locus_tag="SARI_00510"
+ /inference="protein motif:HMMPanther:IPR002155"
+ /inference="protein motif:HMMPfam:IPR002155"
+ /inference="protein motif:HMMTigr:IPR002155"
+ /inference="protein motif:HMMTigr:IPR012806"
+ /inference="protein motif:ScanRegExp:IPR002155"
+ /inference="similar to AA sequence:REFSEQ:YP_217378.1"
+ /note="FadI; fatty acid oxidation complex component beta;
+ functions in a heterotetramer with FadJ; similar to
+ FadA2B2 complex; functions in beta-oxidation of fatty
+ acids during anaerobic growth"
+ /codon_start=1
+ /transl_table=11
+ /product="3-ketoacyl-CoA thiolase"
+ /protein_id="YP_001569578.1"
+ /db_xref="GI:161502466"
+ /db_xref="InterPro:IPR002155"
+ /db_xref="InterPro:IPR012806"
+ /translation="MRQALPLVTRQGDRIAIVSGLRTPFARQATAFHGIPAVDLGKMV
+ VSELLARSEIPADAIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATS
+ FQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKALARVLVDVNKARTTRQRLTLF
+ SRLRLRDLLPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAYRSHQRAAQAWA
+ EGKLAEEVMTTYAPPYKNPFSEDNNIRGNSTLADYAKLRPAFDRKHGSVTAANSTPLT
+ DGAAAVILMTESRAKELGLRPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTM
+ ADLTLFDMHEAFAAQTLANLQLLGSERFARDVLGRAQATGEVDDTKFNVLGGSIAYGH
+ PFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLEAE"
+ misc_feature 509546..510829
+ /gene="fadI"
+ /locus_tag="SARI_00510"
+ /note="3-ketoacyl-CoA thiolase; Reviewed; Region: fadI;
+ PRK08963"
+ /db_xref="CDD:181597"
+ misc_feature 509567..510826
+ /gene="fadI"
+ /locus_tag="SARI_00510"
+ /note="Thiolase are ubiquitous enzymes that catalyze the
+ reversible thiolytic cleavage of 3-ketoacyl-CoA into
+ acyl-CoA and acetyl-CoA, a 2-step reaction involving a
+ covalent intermediate formed with a catalytic cysteine.
+ They are found in prokaryotes and...; Region: thiolase;
+ cd00751"
+ /db_xref="CDD:238383"
+ misc_feature order(509621..509623,509702..509704,509744..509746,
+ 509753..509755,509765..509767,509798..509809,
+ 509831..509833,509852..509857,509864..509866,
+ 509909..509911,510431..510433,510437..510439,
+ 510443..510445,510506..510508,510794..510799)
+ /gene="fadI"
+ /locus_tag="SARI_00510"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238383"
+ misc_feature order(509816..509818,510695..510697,510785..510787)
+ /gene="fadI"
+ /locus_tag="SARI_00510"
+ /note="active site"
+ /db_xref="CDD:238383"
+ gene 510832..512976
+ /gene="fadJ"
+ /locus_tag="SARI_00511"
+ CDS 510832..512976
+ /gene="fadJ"
+ /locus_tag="SARI_00511"
+ /inference="protein motif:Gene3D:IPR006108"
+ /inference="protein motif:HMMPfam:IPR001753"
+ /inference="protein motif:HMMPfam:IPR006108"
+ /inference="protein motif:HMMPfam:IPR006176"
+ /inference="protein motif:HMMTigr:IPR012802"
+ /inference="protein motif:ScanRegExp:IPR006180"
+ /inference="protein motif:superfamily:IPR008927"
+ /note="multifunctional enoyl-CoA
+ hydratase/3-hydroxyacyl-CoA
+ dehydrogenase/3-hydroxybutyryl-CoA epimerase; catalyzes
+ the formation of an hydroxyacyl-CoA by addition of water
+ on enoyl-CoA; exhibits 3-hydroxyacyl-CoA epimerase and
+ 3-hydroxyacyl-CoA dehydrogenase activities: forms a
+ heterotetramer with FadI; similar to FadA2B2 complex;
+ involved in the anaerobic degradation of long and
+ medium-chain fatty acids in the presence of nitrate"
+ /codon_start=1
+ /transl_table=11
+ /product="multifunctional fatty acid oxidation complex
+ subunit alpha"
+ /protein_id="YP_001569579.1"
+ /db_xref="GI:161502467"
+ /db_xref="InterPro:IPR001753"
+ /db_xref="InterPro:IPR006108"
+ /db_xref="InterPro:IPR006176"
+ /db_xref="InterPro:IPR006180"
+ /db_xref="InterPro:IPR008927"
+ /db_xref="InterPro:IPR012802"
+ /translation="MTTSAFTLNVRLDNVAVVSIDVPGEKVNTLKAEFAAQARAILKQ
+ IRENKVLQGVVFISAKADNFIAGADINMIGRCQSAQEAETLARQGQQLMAEIQALPVP
+ VIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGV
+ STALDMILTGKQLRARQALKTGLVDDVVPQTILLEAAVELAKKDRLAQRTLPVRERIL
+ AGALGRTLLFRLVRKKTAQKTQGNYPATERIIDVIETGLAQGSGNGYDAEACAFGELA
+ MTPQSQALRNLFFASTQVKKDPGSDAPSGPLNSVGILGGGLMGGGIALVTACKGGLPV
+ RIKDINAKGINHALKYSWDQLETKVRRRHIKASERDKQLALISGSTDYRGFSHRDLII
+ EAVFEDLSLKQQMVAEVEQNCASHTIFASNTSSLPIGDIAAYAGRPEQVIGLHFFSPV
+ EKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRM
+ LTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVVA
+ SILNDGRKGRKNGRGFYLYGEKGRESKKKVDNAIYKVIGVQGQSRLSAHQVAERCVML
+ MLNEAARCFDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEVVATLQRLAA
+ LYGPRYAPCEQLMRMAERGEHFWMNEETDQGN"
+ misc_feature 510832..512946
+ /gene="fadJ"
+ /locus_tag="SARI_00511"
+ /note="multifunctional fatty acid oxidation complex
+ subunit alpha; Reviewed; Region: fadJ; PRK11154"
+ /db_xref="CDD:236864"
+ misc_feature 510862..511440
+ /gene="fadJ"
+ /locus_tag="SARI_00511"
+ /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
+ superfamily. This superfamily contains a diverse set of
+ enzymes including enoyl-CoA hydratase, napthoate synthase,
+ methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
+ dehydratase, and dienoyl-CoA isomerase; Region:
+ crotonase-like; cd06558"
+ /db_xref="CDD:119339"
+ misc_feature order(510910..510912,510916..510918,511015..511017,
+ 511027..511041,511159..511161,511165..511173,
+ 511243..511248,511255..511257)
+ /gene="fadJ"
+ /locus_tag="SARI_00511"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:119339"
+ misc_feature order(511033..511035,511171..511173)
+ /gene="fadJ"
+ /locus_tag="SARI_00511"
+ /note="oxyanion hole (OAH) forming residues; other site"
+ /db_xref="CDD:119339"
+ misc_feature order(511111..511113,511135..511137,511198..511209,
+ 511249..511260,511276..511278,511282..511290,
+ 511294..511299,511312..511317,511321..511326,
+ 511330..511335,511342..511344,511375..511377,
+ 511384..511386,511429..511431,511438..511440)
+ /gene="fadJ"
+ /locus_tag="SARI_00511"
+ /note="trimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119339"
+ misc_feature 511798..512295
+ /gene="fadJ"
+ /locus_tag="SARI_00511"
+ /note="3-hydroxyacyl-CoA dehydrogenase, NAD binding
+ domain; Region: 3HCDH_N; pfam02737"
+ /db_xref="CDD:202367"
+ misc_feature 512302..512586
+ /gene="fadJ"
+ /locus_tag="SARI_00511"
+ /note="3-hydroxyacyl-CoA dehydrogenase, C-terminal domain;
+ Region: 3HCDH; pfam00725"
+ /db_xref="CDD:216084"
+ gene 513185..513670
+ /locus_tag="SARI_00512"
+ CDS 513185..513670
+ /locus_tag="SARI_00512"
+ /inference="protein motif:HMMPfam:IPR013078"
+ /inference="protein motif:HMMTigr:IPR004449"
+ /inference="similar to AA sequence:REFSEQ:NP_456928.1"
+ /note="'KEGG: sty:STY2619 1.7e-81 phosphohistidine
+ phosphatase K08296;
+ COG: COG2062 Phosphohistidine phosphatase SixA;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphohistidine phosphatase"
+ /protein_id="YP_001569580.1"
+ /db_xref="GI:161502468"
+ /db_xref="InterPro:IPR004449"
+ /db_xref="InterPro:IPR013078"
+ /translation="MQVFIMRHGDAALDAASDSVRPLTSCGCDESRLMANWLKGQKVD
+ IERVLVSPFLRAEQTLDVVGDCMNLPAQVDVLPELTPCGDVGLVSAYLHALANEEIES
+ VLVISHLPLVGYLVSELCPGETPPMFTTSAIANVTLDESGKGTFNWQMSPCNLKMAKA
+ I"
+ misc_feature 513188..513628
+ /locus_tag="SARI_00512"
+ /note="Histidine phosphatase domain found in
+ phosphoglycerate mutases and related proteins, mostly
+ phosphatases; contains a His residue which is
+ phosphorylated during the reaction; Region: HP_PGM_like;
+ cd07067"
+ /db_xref="CDD:132718"
+ misc_feature order(513203..513208,513347..513349,513506..513511)
+ /locus_tag="SARI_00512"
+ /note="catalytic core [active]"
+ /db_xref="CDD:132718"
+ gene complement(513718..514269)
+ /locus_tag="SARI_00513"
+ CDS complement(513718..514269)
+ /locus_tag="SARI_00513"
+ /inference="protein motif:HMMPfam:IPR002625"
+ /inference="protein motif:HMMSmart:IPR002625"
+ /inference="similar to AA sequence:REFSEQ:YP_149792.1"
+ /note="'COG: COG2840 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569581.1"
+ /db_xref="GI:161502469"
+ /db_xref="InterPro:IPR002625"
+ /translation="MKKKASLSEEDQTLFRQLMVGTRQIKQDTIVHRPQRKKITEVPT
+ RRLIQEQADASHYFSDEFQPLLNTEGPVKYVREDVSHFELKKMRRGDYSPELFLDLHG
+ LTQLQAKQELGALITACRREHIFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPK
+ EYGGDAALLVLIEVEEWQPPELP"
+ misc_feature complement(513727..514269)
+ /locus_tag="SARI_00513"
+ /note="hypothetical protein; Provisional; Region:
+ PRK04946"
+ /db_xref="CDD:235321"
+ misc_feature complement(513754..513978)
+ /locus_tag="SARI_00513"
+ /note="Smr domain; Region: Smr; pfam01713"
+ /db_xref="CDD:216658"
+ gene complement(514372..515346)
+ /locus_tag="SARI_00515"
+ CDS complement(514372..515346)
+ /locus_tag="SARI_00515"
+ /inference="similar to AA sequence:INSD:CAE55836.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569582.1"
+ /db_xref="GI:161502471"
+ /translation="MFTGREQLRFGQHKDAIAAVVKLQPGERHIRVLLHQMYHAVSDF
+ TNQNARIGQIIRRIPQDTAGQFKAVSAGRQPQLRFVAIFVWQIGHIFRIDIGRVSDNQ
+ IVLNFRQIAEQIGADWRHVMDKTVLFNVMLGDSQRIRRNIDRINLSVRKSISTGDGDT
+ AAAGTHIQNIFRLLANKTCKVVINQLANGRTRHQHALIDIKFVAAEPGLIGQVGYRNT
+ LVDTTNHSLNNAMFFAGRQPRGTHIFRNIQRQIKRRQHQLHRLIPRVIGAVSIPDIRR
+ AKTAYRPAQHVLNGMQFIHCFIDENFIHVFLQGMLALNSAASLPRRQG"
+ gene 514435..515367
+ /locus_tag="SARI_00514"
+ CDS 514435..515367
+ /locus_tag="SARI_00514"
+ /inference="protein motif:HMMPfam:IPR013217"
+ /inference="protein motif:HMMTigr:IPR004556"
+ /inference="protein motif:ScanRegExp:IPR002052"
+ /inference="similar to AA sequence:REFSEQ:NP_456926.1"
+ /note="involved in methylation of ribosomal protein L3"
+ /codon_start=1
+ /transl_table=11
+ /product="N5-glutamine S-adenosyl-L-methionine-dependent
+ methyltransferase"
+ /protein_id="YP_001569583.1"
+ /db_xref="GI:161502470"
+ /db_xref="InterPro:IPR002052"
+ /db_xref="InterPro:IPR004556"
+ /db_xref="InterPro:IPR013217"
+ /translation="MDKIFVDEAVNELHTIQDMLRWAVSRFSAANIWYGHGTDNPWDE
+ AVQLVLPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGH
+ EFYVDERVLVPRSPIGELINNHFAGLISQQPKYILDMCTGSGCIAIACAYAFPDAEVD
+ AVDISPDALAVAEHNIEEHGLIHHVTPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSD
+ LPNEYRHEPELGLASGTDGLKLTRRILGNAPDYLSDAGVLICEVGNSMVHLMEQYPDV
+ PFTWLEFDNGGDGVFMLTKAQLLAAREHFNIYKD"
+ misc_feature 514477..515343
+ /locus_tag="SARI_00514"
+ /note="HemK family putative methylases; Region: hemK_fam;
+ TIGR00536"
+ /db_xref="CDD:129627"
+ misc_feature 514840..>515064
+ /locus_tag="SARI_00514"
+ /note="S-adenosylmethionine-dependent methyltransferases
+ (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
+ that use S-adenosyl-L-methionine (SAM or AdoMet) as a
+ substrate for methyltransfer, creating the product
+ S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
+ cd02440"
+ /db_xref="CDD:100107"
+ misc_feature order(514849..514869,514921..514926,515002..515010,
+ 515053..515055)
+ /locus_tag="SARI_00514"
+ /note="S-adenosylmethionine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:100107"
+ gene 515403..516488
+ /locus_tag="SARI_00516"
+ CDS 515403..516488
+ /locus_tag="SARI_00516"
+ /inference="protein motif:BlastProDom:IPR000453"
+ /inference="protein motif:HMMPfam:IPR000453"
+ /inference="protein motif:HMMTigr:IPR000453"
+ /inference="protein motif:ScanRegExp:IPR000453"
+ /inference="similar to AA sequence:REFSEQ:YP_149794.1"
+ /note="catalyzes the formation of chorismate from
+ 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino
+ acid biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="chorismate synthase"
+ /protein_id="YP_001569584.1"
+ /db_xref="GI:161502472"
+ /db_xref="InterPro:IPR000453"
+ /translation="MAGNTIGQLFRVTTFGESHGLALGCIVDGVPPGIPLTEADLQHD
+ LDRRRPGTSRYTTQRREPDQVKILSGVFDGVTTGTSIGLLIENTDQRSQDYSAIKDVF
+ RPGHADYTYEQKYGLRDYRGGGRSSARETAMRVAAGAIAKKYLAEKFGIEIRGCLTQM
+ GDIPLEIKDWQQVERNPFFCPDADKLDALDELMRALKKEGDSIGAKVTVIASGVPAGL
+ GEPVFDRLDADIAHALMSINAVKGVEIGEGFKVVALRGSQNRDEITAQGFQSNHAGGI
+ LGGISSGQHIVAHMALKPTSSITVPGRTINRMGEEVEMITKGRHDPCVGIRAVPIAEA
+ MLAIVLMDHLLRHRAQNADVKTEIPRW"
+ misc_feature 515406..516485
+ /locus_tag="SARI_00516"
+ /note="Chorismate synthase [Amino acid transport and
+ metabolism]; Region: AroC; COG0082"
+ /db_xref="CDD:223160"
+ misc_feature 515430..516431
+ /locus_tag="SARI_00516"
+ /note="Chorismase synthase, the enzyme catalyzing the
+ final step of the shikimate pathway; Region:
+ Chorismate_synthase; cd07304"
+ /db_xref="CDD:143612"
+ misc_feature order(515433..515453,515472..515474,515478..515480,
+ 515484..515486,515496..515501,515598..515603,
+ 515607..515612,515631..515636,515640..515642,
+ 515646..515648,515652..515654,515733..515747,
+ 515775..515780,515802..515804,515988..515990,
+ 516003..516020,516051..516053,516057..516065,
+ 516075..516077,516081..516086,516093..516101,
+ 516105..516110,516114..516116,516123..516137,
+ 516144..516149,516153..516158,516168..516173,
+ 516219..516221,516228..516236,516240..516248,
+ 516267..516269,516273..516284,516291..516293,
+ 516405..516407)
+ /locus_tag="SARI_00516"
+ /note="Tetramer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:143612"
+ misc_feature order(515457..515459,515544..515546,515715..515720,
+ 515778..515789,515796..515798,516114..516119,
+ 516276..516281,516285..516293,516372..516374,
+ 516384..516386)
+ /locus_tag="SARI_00516"
+ /note="active site"
+ /db_xref="CDD:143612"
+ misc_feature order(515715..515723,515775..515777,515781..515783,
+ 516111..516119,516279..516281,516285..516293,
+ 516363..516365,516372..516374,516381..516383)
+ /locus_tag="SARI_00516"
+ /note="FMN-binding site [chemical binding]; other site"
+ /db_xref="CDD:143612"
+ gene 516492..517316
+ /gene="mepA"
+ /locus_tag="SARI_00517"
+ CDS 516492..517316
+ /gene="mepA"
+ /locus_tag="SARI_00517"
+ /inference="protein motif:BlastProDom:IPR005073"
+ /inference="protein motif:HMMPfam:IPR005073"
+ /inference="protein motif:HMMPIR:IPR005073"
+ /inference="similar to AA sequence:REFSEQ:NP_456924.1"
+ /note="D-alanyl-D-alanine endopeptidase; functions in
+ hydrolyzing cell wall peptidoglycan; similar to LAS
+ metallopeptidases; forms a dimer in periplasm"
+ /codon_start=1
+ /transl_table=11
+ /product="penicillin-insensitive murein endopeptidase"
+ /protein_id="YP_001569585.1"
+ /db_xref="GI:161502473"
+ /db_xref="InterPro:IPR005073"
+ /translation="MKKTAIALLAWFVSSASLAATPWQKITHPVPGAAQSVGSFANGC
+ IIGADTLPVQSDNYQVMRTDQRRYFGHPDLVMFIQRLSHQAHQRGLGTVLIGDMGMPA
+ GGRFNGGHASHQTGLDVDIFLQLPKTRWSQAQLLRPQALDLVSRDGKHVVPSRWSSDI
+ ASLIKLAAEDNDVTRIFVNPAIKQQLCLDAGSDRDWLRKVRPWFQHRAHMHVRLRCPA
+ DSLECEDQPLPPPGDGCGAELQSWFEPPKPGTTKPEKKTPPPLPPSCQALLDEHVL"
+ misc_feature 516492..517310
+ /gene="mepA"
+ /locus_tag="SARI_00517"
+ /note="Murein endopeptidase [Cell envelope biogenesis,
+ outer membrane]; Region: MepA; COG3770"
+ /db_xref="CDD:226293"
+ misc_feature 516492..517307
+ /gene="mepA"
+ /locus_tag="SARI_00517"
+ /note="penicillin-insensitive murein endopeptidase;
+ Reviewed; Region: mepA; PRK09429"
+ /db_xref="CDD:236511"
+ gene 517316..518125
+ /locus_tag="SARI_00518"
+ CDS 517316..518125
+ /locus_tag="SARI_00518"
+ /inference="protein motif:HMMPfam:IPR002781"
+ /inference="similar to AA sequence:INSD:AAV76484.1"
+ /note="'COG: COG0730 Predicted permeases;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569586.1"
+ /db_xref="GI:161502474"
+ /db_xref="InterPro:IPR002781"
+ /translation="MDNFYELFMVSPLLLVVLFFVAVLAGFIDSIAGGGGLLTIPALM
+ AAGMSPANALATNKLQACGGSLSSSLYFIRRKVVNLAEQKLNILMTFIGSMSGALLVQ
+ HVQADILRQILPILVIFIGLYFLLMPKLGEEDRQRRLYGLPFALIAGGCVGFYDGFFG
+ PAAGSFYALAFVTLCGYNLAKSTAHAKVLNATSNVGGLLLFIIGGKVIWATGFVMLVG
+ QFLGARMGSRLVLSKGQKLIRPMIVIVSAVMSAKLLYDSHGQEILHWLGMN"
+ misc_feature 517325..518122
+ /locus_tag="SARI_00518"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10621"
+ /db_xref="CDD:182593"
+ misc_feature 517391..518074
+ /locus_tag="SARI_00518"
+ /note="Sulfite exporter TauE/SafE; Region: TauE;
+ pfam01925"
+ /db_xref="CDD:216790"
+ gene 518125..518673
+ /locus_tag="SARI_00519"
+ CDS 518125..518673
+ /locus_tag="SARI_00519"
+ /inference="protein motif:HMMPfam:IPR007411"
+ /inference="similar to AA sequence:REFSEQ:YP_149797.1"
+ /note="'COG: COG3101 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569587.1"
+ /db_xref="GI:161502475"
+ /db_xref="InterPro:IPR007411"
+ /translation="MNSTHHYEQLIEIFNGCFAAEFNTRLIKGDDEPIYLPANAQVPY
+ HRIVFAHGFYASALHEISHWCIAGKARRELVDFGYWYCPDGRDAQTQSQFEDVEVKPQ
+ AFDWLFCVAAGYPFNVSCDNLEGDIEPDRVAFQRRVHAQVMAYLEQGIPERPARFIKA
+ LQNYYHTPELKAEQFPWPEELN"
+ misc_feature 518137..518670
+ /locus_tag="SARI_00519"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG3101"
+ /db_xref="CDD:225643"
+ gene 518706..518978
+ /locus_tag="SARI_00520"
+ CDS 518706..518978
+ /locus_tag="SARI_00520"
+ /inference="similar to AA sequence:REFSEQ:NP_456922.1"
+ /note="'COG: NOG13546 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569588.1"
+ /db_xref="GI:161502476"
+ /translation="MIAEFESRILALIDDMVEHASDDELFASGYLRGHLTLAIAELES
+ GVDHSVEAVYANVSQSLEKAIGAGELSPRDQALVKAMWDNLFDKAK"
+ misc_feature 518709..518969
+ /locus_tag="SARI_00520"
+ /note="YfcL protein; Region: YfcL; pfam08891"
+ /db_xref="CDD:117458"
+ gene complement(519029..521029)
+ /gene="mnmC"
+ /locus_tag="SARI_00521"
+ CDS complement(519029..521029)
+ /gene="mnmC"
+ /locus_tag="SARI_00521"
+ /inference="protein motif:HMMPfam:IPR006076"
+ /inference="protein motif:HMMPfam:IPR008471"
+ /note="catalyzes the formation of
+ 5-methylaminomethyl-2-thiouridine in position 34 of the
+ anticodon of tRNA molecules"
+ /codon_start=1
+ /transl_table=11
+ /product="5-methylaminomethyl-2-thiouridine
+ methyltransferase"
+ /protein_id="YP_001569589.1"
+ /db_xref="GI:161502477"
+ /db_xref="InterPro:IPR006076"
+ /db_xref="InterPro:IPR008471"
+ /translation="MKQYAIQPATLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLG
+ GNRLAERFPVHSHPLFIVAESGFGTGLNFLTLWQAFNNFRSEHPQATLQRLHFVSFEK
+ FPLTRDDLALTHQHWPELAPWAEQLQAQWPLPLAGCHRLLLDQGRVTLDLWFGDINEL
+ TDQLDATLNQKVDAWFLDGFAPAKNPDMWTPNLFNTMARLARPGATLATFTSAGFVRR
+ GLQEAGFTMQKRKGFGRKREMLCGVMERCLTPTISAPWFYRSGSEKRETAIIGGGIAS
+ ALLSLALLRRGWQVTLYCADDKPARGASGNQQGALYPLLSKHDAAINRFFPTAFTFAR
+ RLYDALPVSFDHDWCGVTQLGWDEKSQQKIARMLSLALPAGLASALNAEETTQAVGVT
+ TRCGGITYPAGGWLCPEQLTRAVIALATEQGLQTRFRHTLTSLAAQKSQWQLRFASGE
+ AASHDTVVLANGHQINRFDQTQPLPVYAVGGQVSHIPTTPALSALRQVLCYDGYLTPQ
+ NPNNRQHCIGASYHRGNESTVWREEDQRQNRQRLLDCFPDADWAKEVDVSDNSARCGV
+ RCATRDHLPMVGNVPDYHATLTHYADLADNKASAVPAPVYPGLFMLGALGSRGLCSAP
+ LCAEILAAQMSNEPIPLDASTLAALNPNRLWVRKLLKGKAVK"
+ misc_feature complement(520265..521029)
+ /gene="mnmC"
+ /locus_tag="SARI_00521"
+ /note="Uncharacterized conserved protein [Function
+ unknown]; Region: COG4121"
+ /db_xref="CDD:226606"
+ misc_feature complement(519032..521026)
+ /gene="mnmC"
+ /locus_tag="SARI_00521"
+ /note="bifunctional tRNA
+ (mnm(5)s(2)U34)-methyltransferase/FAD-dependent
+ cmnm(5)s(2)U34 oxidoreductase; Reviewed; Region: mnmC;
+ PRK01747"
+ /db_xref="CDD:234978"
+ gene 521189..522409
+ /locus_tag="SARI_00522"
+ CDS 521189..522409
+ /locus_tag="SARI_00522"
+ /inference="protein motif:HMMPanther:IPR000794"
+ /inference="protein motif:HMMPfam:IPR000794"
+ /inference="protein motif:ScanRegExp:IPR000794"
+ /inference="similar to AA sequence:REFSEQ:YP_149800.1"
+ /note="'FabB, beta-Ketoacyl-ACP synthase I, KASI;
+ catalyzes a condensation reaction in fatty acid
+ biosynthesis: addition of an acyl acceptor of two carbons
+ from malonyl-ACP; required for the elongation of
+ short-chain unsaturated acyl-ACP'"
+ /codon_start=1
+ /transl_table=11
+ /product="3-oxoacyl-(acyl carrier protein) synthase I"
+ /protein_id="YP_001569590.1"
+ /db_xref="GI:161502478"
+ /db_xref="InterPro:IPR000794"
+ /translation="MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDAGM
+ RSQVWGNVKLDTTGLIDRKVVRFMSDASIYAYLSMEQAVADAGLAPEVYQNNPRVGLI
+ AGSGGGSPKFQVFGADAMRSPRGLKAVGPYVVTKAMASGVSACLATPFKIFGVNYSIS
+ SACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKA
+ SRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEG
+ AVRCMQMAMHGVDTPIDYLNSHGTSTPVGDVKELGAIREVFGDKSPAISATKAMTGHS
+ LGAAGVQEAIYSLLMLEHGFIAPSINIEQMDEQAAGLNIVTETTERGLTTVMSNSFGF
+ GGTNATLVMRKLKG"
+ misc_feature 521189..522406
+ /locus_tag="SARI_00522"
+ /note="3-oxoacyl-(acyl carrier protein) synthase I;
+ Reviewed; Region: PRK07967"
+ /db_xref="CDD:181184"
+ misc_feature 521192..522391
+ /locus_tag="SARI_00522"
+ /note="Beta-ketoacyl-acyl carrier protein (ACP) synthase
+ (KAS), type I and II. KASs are responsible for the
+ elongation steps in fatty acid biosynthesis. KASIII
+ catalyses the initial condensation and KAS I and II
+ catalyze further elongation steps by Claisen...; Region:
+ KAS_I_II; cd00834"
+ /db_xref="CDD:238430"
+ misc_feature order(521504..521506,521525..521530,521540..521542,
+ 521546..521551,521588..521590,521606..521608,
+ 521618..521620,521630..521632,521648..521650,
+ 521654..521656,521660..521668,521702..521704,
+ 521711..521716,521723..521725,521786..521788,
+ 521795..521800,521975..521989,522023..522025,
+ 522365..522367,522371..522373)
+ /locus_tag="SARI_00522"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238430"
+ misc_feature order(521675..521677,522080..522082,522185..522187)
+ /locus_tag="SARI_00522"
+ /note="active site"
+ /db_xref="CDD:238430"
+ gene complement(522576..523094)
+ /locus_tag="SARI_00523"
+ CDS complement(522576..523094)
+ /locus_tag="SARI_00523"
+ /inference="similar to AA sequence:INSD:AAV76490.1"
+ /note="'COG: NOG26784 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569591.1"
+ /db_xref="GI:161502479"
+ /translation="MKTFSLVALILLLCSCSAPHHDSTQAVKQFYTSWMTTFTNDVNT
+ PDDTTALMQRYVAKEVIHRLALIQSLYEQAIVGADYFMYAQDYAPEWIPQLRVGKAHP
+ FLGGEKVDVLLGTESTPIHLEVYTRWEEGRWKIYRVRDADKGYEQPIYDAGAITQAEA
+ WSAKIATEYEKY"
+ misc_feature complement(522675..523028)
+ /locus_tag="SARI_00523"
+ /note="Protein of unknown function (DUF3828); Region:
+ DUF3828; pfam12883"
+ /db_xref="CDD:221829"
+ gene complement(523094..523462)
+ /locus_tag="SARI_00524"
+ CDS complement(523094..523462)
+ /locus_tag="SARI_00524"
+ /inference="similar to AA sequence:REFSEQ:YP_217364.1"
+ /note="'COG: NOG18512 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569592.1"
+ /db_xref="GI:161502480"
+ /translation="MSWDKRMAVNYAKTHAGSHSQGRCAEFTRKAIQAGGITLGHTYH
+ AKDYGPMLRSAGFTAIGTYEMPREGDVIIIQPYAGGNPSGHMAIYDGAEWYSDFKQRD
+ MWAGPGYRAARPSYTIYRKN"
+ gene complement(523631..523879)
+ /locus_tag="SARI_00525"
+ CDS complement(523631..523879)
+ /locus_tag="SARI_00525"
+ /inference="protein motif:HMMPfam:IPR001387"
+ /inference="protein motif:HMMSmart:IPR001387"
+ /inference="protein motif:superfamily:IPR010982"
+ /inference="similar to AA sequence:REFSEQ:NP_456916.1"
+ /note="'COG: COG3423 Predicted transcriptional regulator;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569593.1"
+ /db_xref="GI:161502481"
+ /db_xref="InterPro:IPR001387"
+ /db_xref="InterPro:IPR010982"
+ /translation="MEPKSQDWHRADIKSALEKRGITLRDLSRQAGLSPDSLRNVFTR
+ SWPRAERIIADALGITPQEIWPSRYGDMQIKNDADTAE"
+ misc_feature complement(523688..523843)
+ /locus_tag="SARI_00525"
+ /note="Helix-turn-helix XRE-family like proteins.
+ Prokaryotic DNA binding proteins belonging to the
+ xenobiotic response element family of transcriptional
+ regulators; Region: HTH_XRE; cd00093"
+ /db_xref="CDD:238045"
+ misc_feature complement(order(523751..523753,523826..523828,
+ 523838..523840))
+ /locus_tag="SARI_00525"
+ /note="non-specific DNA binding site [nucleotide binding];
+ other site"
+ /db_xref="CDD:238045"
+ misc_feature complement(order(523754..523756,523829..523831))
+ /locus_tag="SARI_00525"
+ /note="salt bridge; other site"
+ /db_xref="CDD:238045"
+ misc_feature complement(order(523751..523753,523763..523765,
+ 523772..523774,523805..523810))
+ /locus_tag="SARI_00525"
+ /note="sequence-specific DNA binding site [nucleotide
+ binding]; other site"
+ /db_xref="CDD:238045"
+ gene 524052..524426
+ /locus_tag="SARI_00526"
+ CDS 524052..524426
+ /locus_tag="SARI_00526"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:superfamily:IPR009061"
+ /inference="similar to AA sequence:INSD:AAV76493.1"
+ /note="'COG: NOG28278 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569594.1"
+ /db_xref="GI:161502482"
+ /db_xref="InterPro:IPR009061"
+ /db_xref="InterPro:IPR011991"
+ /translation="MAKEWFTVKECLGLPGFPGSEPAVRERLYKYSEGKEGVRRKRLK
+ SKAEEFHISVFPLYVHRYLDEGGEEPVSDHISVQEAEPKDIWEMMFRLLTPEQRKQVT
+ GLFRVKGMKAVFPFLFDGKPPR"
+ gene 524604..525782
+ /locus_tag="SARI_00527"
+ CDS 524604..525782
+ /locus_tag="SARI_00527"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="similar to AA sequence:REFSEQ:YP_149806.1"
+ /note="'KEGG: bja:bll2324 0.00030
+ long-chain-fatty-acid--[acyl-carrier-protein] ligase /
+ acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase
+ K05939:K01909;
+ COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569595.1"
+ /db_xref="GI:161502483"
+ /db_xref="InterPro:IPR011701"
+ /translation="MTAVSQKTHTPPANFLLFRIAFAVFLTYMTVGLPLPVIPLFVRH
+ ELGYSNTMVGIAVGIQFFATVLTRGYAGRLADQYGAKRSALQGMLACGLAGAAWLLAA
+ LLPVSASVKFALLIVGRLILGFGESQLLTGTLTWGMGLVGPARSGKVMSWNGMAIYGA
+ LAAGAPLGLLIHSHFGFAALAVTTMALPLLAWAFNGTVRKVPAHAGERPSLWSVVGLI
+ WKPGLGLALQGVGFAVIGTFISLYFASNGWAMAGFTLTAFGGAFVLMRMLFGWMPDRF
+ GGVKVAIVSLLVETAGLLLLWLAPMAWIALVGAALTGAGCSLIFPALGVEVVKRVPSQ
+ VRGTALGGYAAFQDISYGVTGPLAGVLATSCGYSSVFLAGALSAVVGILVTILSFRRG
+ "
+ misc_feature 524604..525779
+ /locus_tag="SARI_00527"
+ /note="putative transporter; Provisional; Region:
+ PRK12382"
+ /db_xref="CDD:183487"
+ misc_feature 524652..525764
+ /locus_tag="SARI_00527"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature order(524694..524696,524703..524711,524715..524720,
+ 524772..524774,524781..524786,524793..524795,
+ 524805..524810,524814..524819,524979..524984,
+ 524991..524996,525003..525008,525015..525017,
+ 525051..525056,525063..525068,525084..525086,
+ 525288..525290,525297..525302,525309..525314,
+ 525321..525323,525354..525356,525366..525368,
+ 525378..525380,525387..525389,525399..525401,
+ 525540..525542,525549..525554,525561..525563,
+ 525573..525578,525585..525587,525618..525623,
+ 525630..525635,525642..525647,525654..525656)
+ /locus_tag="SARI_00527"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene complement(525779..526780)
+ /gene="flk"
+ /locus_tag="SARI_00528"
+ CDS complement(525779..526780)
+ /gene="flk"
+ /locus_tag="SARI_00528"
+ /inference="similar to AA sequence:INSD:AAV76495.1"
+ /note="in Salmonella typhimurium Flk regulates flagellar
+ biosynthesis by inhibition of the flagellar-associated
+ type III secretion system; lowers secretion levels of the
+ anti-sigma28 factor FlgM to the periplasm; inner
+ membrane-anchored protein"
+ /codon_start=1
+ /transl_table=11
+ /product="flagella biosynthesis regulator"
+ /protein_id="YP_001569596.1"
+ /db_xref="GI:161502484"
+ /translation="MHPISGAPAQPPGEGQNPLSAAGEQPLSMQQRTVLERLITRLIS
+ LSQQQSAEVWAGMKHDLGIKNDAPLLSRHFPAAEQNLTQRLGVAQQNHANRQVLSQLT
+ ELLGVGNNRQAVSDFIRQQYGQTALSQLTPDQLKNVLTLLQQGQLSIPQPQQRPATDR
+ PLLPAEHNTLNQLVTKLAAATGESSKLIWQSMLELSGVKSGELIPAKQFTHLVTWLQA
+ RQTLSLQHAPTLHTLQAALKQPLEPDELTAIKEYAQHMYQIQPQTVLTTAQVQDLLNH
+ IFLRRVEREADELEPLSIQPVYRPFAPMIETVKNLSARPGLLFIALMIVLALFWLVS"
+ misc_feature complement(525785..526780)
+ /gene="flk"
+ /locus_tag="SARI_00528"
+ /note="flagella biosynthesis regulator; Provisional;
+ Region: flk; PRK10715"
+ /db_xref="CDD:182670"
+ gene 526884..528020
+ /locus_tag="SARI_00529"
+ CDS 526884..528020
+ /locus_tag="SARI_00529"
+ /inference="protein motif:HMMPfam:IPR006139"
+ /inference="protein motif:HMMPfam:IPR006140"
+ /inference="protein motif:ScanRegExp:IPR006140"
+ /inference="similar to AA sequence:REFSEQ:YP_217359.1"
+ /note="'KEGG: sec:SC2372 3.5e-193 pdxB;
+ erythronate-4-phosphate dehyrogenase K03473;
+ COG: COG0111 Phosphoglycerate dehydrogenase and related
+ dehydrogenases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="erythronate-4-phosphate dehydrogenase"
+ /protein_id="YP_001569597.1"
+ /db_xref="GI:161502485"
+ /db_xref="InterPro:IPR006139"
+ /db_xref="InterPro:IPR006140"
+ /translation="MKILVDENMPYARELFSRLGEVKTVPGRPIPVEELNHADALMVR
+ SVTKVNESLLSGTPIKFVGTATAGTDHVDEAWLKQEGIGFSAAPGCNAIAVVEYVFSA
+ LLMLAERDGFSLRDRTVGIVGVGNVGSRLQTRLEALGIRTLLCDPPRAARGDEGDFRT
+ MDEVVEEADVLTFHTPLYKDGPYKTLHLVDETLIRRLKPGAILINACRGPVVDNAALL
+ ARLTAGQPISVVLDVWEGEPDLNVALLDAVDIGTSHIAGYTLEGKARGTTQVFEAYSA
+ FIGREQHVALETLLPAPEFGRITLHGPLDQPTLKRLAHLVYDVRRDDAPLRKVAGIPG
+ EFDKLRKNYLERREWSSLYVMCDDASAAALLQKLGFNAVHHPAR"
+ misc_feature 526884..528017
+ /locus_tag="SARI_00529"
+ /note="erythronate-4-phosphate dehydrogenase PdxB;
+ Provisional; Region: PRK15438"
+ /db_xref="CDD:185335"
+ misc_feature 526887..527912
+ /locus_tag="SARI_00529"
+ /note="D-Erythronate-4-Phosphate Dehydrogenase NAD-binding
+ and catalytic domains; Region: ErythrP_dh; cd12158"
+ /db_xref="CDD:240635"
+ misc_feature order(527154..527156,527505..527507,527643..527645,
+ 527655..527657,527901..527903)
+ /locus_tag="SARI_00529"
+ /note="ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:240635"
+ misc_feature order(527154..527156,527166..527168,527247..527264,
+ 527316..527327,527403..527411,527430..527432,
+ 527436..527438,527499..527507,527577..527582,
+ 527643..527645,527649..527654)
+ /locus_tag="SARI_00529"
+ /note="NAD binding site [chemical binding]; other site"
+ /db_xref="CDD:240635"
+ misc_feature order(527505..527507,527592..527594,527643..527645)
+ /locus_tag="SARI_00529"
+ /note="catalytic site [active]"
+ /db_xref="CDD:240635"
+ misc_feature order(527760..527786,527790..527798,527805..527807,
+ 527814..527816,527826..527828,527835..527837,
+ 527841..527846,527853..527855,527865..527867)
+ /locus_tag="SARI_00529"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:240635"
+ gene 528080..529093
+ /locus_tag="SARI_00530"
+ CDS 528080..529093
+ /locus_tag="SARI_00530"
+ /inference="protein motif:HMMPfam:IPR000534"
+ /inference="protein motif:HMMPfam:IPR012280"
+ /inference="protein motif:HMMPIR:IPR012080"
+ /inference="similar to AA sequence:REFSEQ:NP_456911.1"
+ /note="'KEGG: eci:UTI89_C2604 1.6e-158 usg; USG-1 protein
+ K00133;
+ COG: COG0136 Aspartate-semialdehyde dehydrogenase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative semialdehyde dehydrogenase"
+ /protein_id="YP_001569598.1"
+ /db_xref="GI:161502486"
+ /db_xref="InterPro:IPR000534"
+ /db_xref="InterPro:IPR012080"
+ /db_xref="InterPro:IPR012280"
+ /translation="MSEGWNIAVLGATGAVGEALLETLAERQFPVGEIYALARHESAG
+ EHLRFGGKSVIVQDAADFDWTQAQLAFFVAGAEASAAWVEDATNAGCLVIDSSGLFAL
+ EPDVPLVVPEVNPYVLADYRNRNLIAVADSLTSQLLAALKPLIDQGGLSRIAVTSMLS
+ ASAQGKKAVDALAGQSAKLLNGIPIDEDDFFGRQLAFNMLPLLPDREGSVRQERRIVD
+ EVRKILQDDGVMISASVVQSPVFYGHAQMVSFEALRPLAAEEAREALSRGEDIVLSEE
+ TDYPTQVGDASGNPQLSIGCVHNDYGMPEQIQFWSVADNIRFGGALMAVKTAEKLVQE
+ YLY"
+ misc_feature 528080..529090
+ /locus_tag="SARI_00530"
+ /note="putative semialdehyde dehydrogenase; Provisional;
+ Region: PRK08040"
+ /db_xref="CDD:181205"
+ misc_feature 528095..528379
+ /locus_tag="SARI_00530"
+ /note="Semialdehyde dehydrogenase, NAD binding domain;
+ Region: Semialdhyde_dh; smart00859"
+ /db_xref="CDD:214863"
+ gene 529093..529905
+ /gene="truA"
+ /locus_tag="SARI_00531"
+ CDS 529093..529905
+ /gene="truA"
+ /locus_tag="SARI_00531"
+ /inference="protein motif:Gene3D:IPR001406"
+ /inference="protein motif:HMMPanther:IPR001406"
+ /inference="protein motif:HMMPfam:IPR001406"
+ /inference="protein motif:HMMTigr:IPR001406"
+ /inference="similar to AA sequence:INSD:AAV76498.1"
+ /note="'mediates pseudouridylation (positions 38, 39, 40)
+ at the tRNA anticodon region which contributes to the
+ structural stability'"
+ /codon_start=1
+ /transl_table=11
+ /product="tRNA pseudouridine synthase A"
+ /protein_id="YP_001569599.1"
+ /db_xref="GI:161502487"
+ /db_xref="InterPro:IPR001406"
+ /translation="MSGQQSSPVYKIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALS
+ QVANEPINVFCAGRTDAGVHGTGQVVHFETTALRKDVAWTLGVNANLPGDIAVRWVKA
+ VADDFHARFSATARRYRYIIYNHRLRPAVLAKGVTHYYKPLDAERMHRAAQCLIGEND
+ FTSFRAVQCQSRTPWRNVMHISVTRHGPYVVVDIKANAFVHHMVRNIVGSLLEVGAHN
+ QPESWIAELLAAKDRTLAAATAKAEGLYLVAVDYPDRFDLPKPPMGPLFLAD"
+ misc_feature 529123..529848
+ /gene="truA"
+ /locus_tag="SARI_00531"
+ /note="tRNA pseudouridine synthase A; Validated; Region:
+ truA; PRK00021"
+ /db_xref="CDD:234577"
+ misc_feature 529132..529848
+ /gene="truA"
+ /locus_tag="SARI_00531"
+ /note="Eukaryotic and bacterial pseudouridine synthases
+ similar to E. coli TruA; Region: PseudoU_synth_EcTruA;
+ cd02570"
+ /db_xref="CDD:211337"
+ misc_feature order(529141..529143,529354..529356,529363..529386)
+ /gene="truA"
+ /locus_tag="SARI_00531"
+ /note="dimerization interface 3.5A [polypeptide binding];
+ other site"
+ /db_xref="CDD:211337"
+ misc_feature order(529261..529272,529705..529707)
+ /gene="truA"
+ /locus_tag="SARI_00531"
+ /note="active site"
+ /db_xref="CDD:211337"
+ gene 529954..530613
+ /locus_tag="SARI_00532"
+ CDS 529954..530613
+ /locus_tag="SARI_00532"
+ /inference="similar to AA sequence:INSD:AAO68203.1"
+ /note="'KEGG: lsl:LSL_1322 1.6e-14 alkaline phosphatase
+ K01077;
+ COG: COG0586 Uncharacterized membrane-associated protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569600.1"
+ /db_xref="GI:161502488"
+ /translation="MDLIYFIIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLV
+ VTPFLPGDSLLFVAGALASLETNDLNVHIMVALMLIAAIVGDAVNYTIGRLFGEKLFS
+ NPDSKIFRRSYLDKTHQFYEKHGGKTIILARFVPIIRTFAPFVAGMGHMSYRHFAAYN
+ VIGALLWVLLFTYAGYFFGTIPFIQDNLKLLIVGIIVVSILPGVIEIIRHKRAASRAA
+ K"
+ misc_feature 529954..530610
+ /locus_tag="SARI_00532"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10847"
+ /db_xref="CDD:182775"
+ misc_feature 529993..530514
+ /locus_tag="SARI_00532"
+ /note="Uncharacterized membrane-associated protein
+ [Function unknown]; Region: DedA; COG0586"
+ /db_xref="CDD:223659"
+ gene 530763..531677
+ /locus_tag="SARI_00533"
+ CDS 530763..531677
+ /locus_tag="SARI_00533"
+ /inference="protein motif:HMMPfam:IPR000022"
+ /inference="protein motif:HMMTigr:IPR000438"
+ /inference="similar to AA sequence:REFSEQ:YP_217355.1"
+ /note="catalyzes the carboxylation of acetyl-CoA to
+ malonyl-CoA; forms a tetramer of AccA2D2 subunits"
+ /codon_start=1
+ /transl_table=11
+ /product="acetyl-CoA carboxylase subunit beta"
+ /protein_id="YP_001569601.2"
+ /db_xref="GI:448236198"
+ /db_xref="InterPro:IPR000022"
+ /db_xref="InterPro:IPR000438"
+ /translation="MSWIERIKSNITPTRKASIPEGVWTKCDSCGQVLYRAELERNLE
+ VCPKCDHHMRMSARNRLHSLLDEGSLVELGSELEPKDVLKFRDSKKYKDRLASAQKET
+ GEKDALVVMKGTLHGMPVVAAAFEFAFMGGSMGSVVGARFVRAVEQALEDNCPLICFS
+ ASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNI
+ AEPKALIGFAGPRVIEQTVREKLPPGFQRSEFLIEKGAIDMIVRRPEMRLKLASILAK
+ LMNLPAPNPDAPREGVVVPPAPGQESEA"
+ misc_feature 530763..531611
+ /locus_tag="SARI_00533"
+ /note="acetyl-CoA carboxylase subunit beta; Validated;
+ Region: PRK05654"
+ /db_xref="CDD:235547"
+ misc_feature 531078..>531467
+ /locus_tag="SARI_00533"
+ /note="malonate decarboxylase subunit beta; Reviewed;
+ Region: PRK07189; cl17682"
+ /db_xref="CDD:248236"
+ unsure 530976..531110
+ /locus_tag="SARI_00533"
+ /note="Sequence derived from one plasmid subclone"
+ gene 531745..533013
+ /locus_tag="SARI_00534"
+ CDS 531745..533013
+ /locus_tag="SARI_00534"
+ /inference="protein motif:HMMPanther:IPR001645"
+ /inference="protein motif:HMMPfam:IPR004101"
+ /inference="protein motif:HMMPfam:IPR013221"
+ /inference="protein motif:HMMTigr:IPR001645"
+ /inference="protein motif:ScanRegExp:IPR001645"
+ /inference="similar to AA sequence:REFSEQ:NP_456907.1"
+ /note="'KEGG: sty:STY2596 6.2e-219 folC;
+ folylpolyglutamate synthase K01927:K01930;
+ COG: COG0285 Folylpolyglutamate synthase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="bifunctional folylpolyglutamate synthase/
+ dihydrofolate synthase"
+ /protein_id="YP_001569602.1"
+ /db_xref="GI:161502490"
+ /db_xref="InterPro:IPR001645"
+ /db_xref="InterPro:IPR004101"
+ /db_xref="InterPro:IPR013221"
+ /translation="MKNKSIPQAASPLASWLSYLENLHSKSIDLGLERVSQVAERLGI
+ LKPAPFVFTVAGTNGKGTTCQTLESVLIAAGYRVGVYSSPHLVRYTERVRVQGEELAE
+ SAHTTSFAEIEAARGDISLTYFEYGTLSALWLFKQANLDVVILEVGLGGRLDATNIVD
+ ADVSVITSIALDHTDWLGPDRESIGREKAGIFRAEKPAVVGEPEMPATIADVAQETGA
+ LLRRRGVDWRYEATATHWAFTDGDGTLAGLPLPQVPQPNAATALAALRASGLNIDEQA
+ IRDGIAQATLPGRFQIVSESPRVIFDVAHNPHAAEYLTGRLKTLPKRGRMLAVIGMLH
+ DKDIAGTLAWLKSVVDDWYCAPLEGPRGATAEQLLEHLGKGNVYDSVAQAWQAAIDAA
+ QPEDTVLVCGSFHTVAHVMEVIDAGRIGGE"
+ misc_feature 531745..532992
+ /locus_tag="SARI_00534"
+ /note="bifunctional folylpolyglutamate synthase/
+ dihydrofolate synthase; Provisional; Region: PRK10846"
+ /db_xref="CDD:182774"
+ misc_feature 531910..>532344
+ /locus_tag="SARI_00534"
+ /note="Mur ligase middle domain; Region: Mur_ligase_M;
+ pfam08245"
+ /db_xref="CDD:219763"
+ misc_feature 532603..>532761
+ /locus_tag="SARI_00534"
+ /note="Mur ligase family, glutamate ligase domain; Region:
+ Mur_ligase_C; pfam02875"
+ /db_xref="CDD:217262"
+ gene 533003..533653
+ /locus_tag="SARI_00535"
+ CDS 533003..533653
+ /locus_tag="SARI_00535"
+ /inference="protein motif:HMMPfam:IPR007730"
+ /inference="similar to AA sequence:INSD:AAL21265.1"
+ /note="'KEGG: pfo:Pfl_1900 4.3e-12 argininosuccinate
+ synthase K03749;
+ COG: COG3147 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569603.1"
+ /db_xref="GI:161502491"
+ /db_xref="InterPro:IPR007730"
+ /translation="MASKFQNRLVGTIVLVALGVIVLPGLLDGQKKHYQDEFAAIPLV
+ PKPGDRDEPDMMPAATQALPTQPPEGAAEEVQAGDAAAPSLDPSRMASNNIELDPIPV
+ ETPKPKSQPKPQQSVAAVSTPAQKPLADDKPAPTGKAYVVQLGALKNADKVNEIVGKL
+ RSAGFRVYTSPSTPVQGKITRILVGPDASKDKMKGSLGELKQISGLSGVVMGYSPN"
+ misc_feature 533003..533650
+ /locus_tag="SARI_00535"
+ /note="cell division protein DedD; Provisional; Region:
+ PRK11633"
+ /db_xref="CDD:236940"
+ misc_feature 533411..533632
+ /locus_tag="SARI_00535"
+ /note="Sporulation related domain; Region: SPOR;
+ pfam05036"
+ /db_xref="CDD:113793"
+ gene 533862..534350
+ /locus_tag="SARI_00536"
+ CDS 533862..534350
+ /locus_tag="SARI_00536"
+ /inference="protein motif:HMMPfam:IPR003825"
+ /inference="similar to AA sequence:INSD:ABI37070.1"
+ /note="membrane protein required for colicin V production"
+ /codon_start=1
+ /transl_table=11
+ /product="colicin V production protein"
+ /protein_id="YP_001569604.1"
+ /db_xref="GI:161502492"
+ /db_xref="InterPro:IPR003825"
+ /translation="MVWIDYAIIAVIAFSCLVSLIRGFVREALSLVTWGCAFFVASHY
+ YTYLSVWFTGFEDELVRNGIAIAVLFIATLIVGAIVNFVIGQLVEKTGLSGTDRVLGI
+ CFGALRGALIVAAILFFLDTFTGLSKSEDWSKSQLIPQFSFIIRWFFDYLQSSSSFLP
+ RT"
+ misc_feature 533862..534347
+ /locus_tag="SARI_00536"
+ /note="colicin V production protein; Provisional; Region:
+ PRK10845"
+ /db_xref="CDD:182773"
+ misc_feature 533862..534338
+ /locus_tag="SARI_00536"
+ /note="Uncharacterized membrane protein, required for
+ colicin V production [General function prediction only];
+ Region: CvpA; COG1286"
+ /db_xref="CDD:224205"
+ gene 534388..535905
+ /locus_tag="SARI_00537"
+ CDS 534388..535905
+ /locus_tag="SARI_00537"
+ /inference="protein motif:HMMPanther:IPR005854"
+ /inference="protein motif:HMMPfam:IPR000583"
+ /inference="protein motif:HMMPfam:IPR000836"
+ /inference="protein motif:HMMTigr:IPR005854"
+ /inference="protein motif:ScanRegExp:IPR000583"
+ /inference="protein motif:ScanRegExp:IPR002375"
+ /inference="similar to AA sequence:REFSEQ:YP_149816.1"
+ /note="Catalyzes first step of the de novo purine
+ nucleotide biosynthetic pathway"
+ /codon_start=1
+ /transl_table=11
+ /product="amidophosphoribosyltransferase"
+ /protein_id="YP_001569605.1"
+ /db_xref="GI:161502493"
+ /db_xref="InterPro:IPR000583"
+ /db_xref="InterPro:IPR000836"
+ /db_xref="InterPro:IPR002375"
+ /db_xref="InterPro:IPR005854"
+ /translation="MCGIVGIAGVMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFR
+ LRKANGLVNDIFEARHMQRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPYGITLAHN
+ GNLTNAHELRKKLFEEKRRHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAAT
+ NRQIRGAYACVAMIIGHGMVAFRDPHGIRPLVLGKRDVGDGRTEYMVASESVALDTLG
+ FEFLRDVAPGEAIYITEKGQLFTRQCADNPVSNPCLFEYVYFARPDSFIDKISVYSAR
+ VNMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRT
+ FIMPGQQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVY
+ LASAAPEIRFPNVYGIDMPTANELIAHGREVDEIRQIIGADGLIFQDLDDLIEAVRAE
+ NPDIQQFECSVFNGVYVTKDVDQQYLDFLDSLRNDDAKAVLFQNEMENLEMHNEG"
+ misc_feature 534388..535902
+ /locus_tag="SARI_00537"
+ /note="amidophosphoribosyltransferase; Provisional;
+ Region: PRK09246"
+ /db_xref="CDD:236427"
+ misc_feature 534391..535191
+ /locus_tag="SARI_00537"
+ /note="Glutamine amidotransferases class-II (GN-AT)_GPAT-
+ type. This domain is found at the N-terminus of glutamine
+ phosphoribosylpyrophosphate (Prpp) amidotransferase
+ (GPATase) . The glutaminase domain catalyzes amide
+ nitrogen transfer from glutamine to the...; Region:
+ GPATase_N; cd00715"
+ /db_xref="CDD:238367"
+ misc_feature order(534391..534393,534466..534471,534607..534609,
+ 534691..534696,534769..534771)
+ /locus_tag="SARI_00537"
+ /note="active site"
+ /db_xref="CDD:238367"
+ misc_feature order(534439..534444,534451..534453,534472..534474,
+ 534658..534660,534775..534777,534784..534789,
+ 534796..534801)
+ /locus_tag="SARI_00537"
+ /note="tetramer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238367"
+ misc_feature 535234..535581
+ /locus_tag="SARI_00537"
+ /note="Phosphoribosyl transferase (PRT)-type I domain;
+ Region: PRTases_typeI; cd06223"
+ /db_xref="CDD:206754"
+ misc_feature order(535294..535296,535300..535302,535486..535494,
+ 535498..535512)
+ /locus_tag="SARI_00537"
+ /note="active site"
+ /db_xref="CDD:206754"
+ gene complement(535942..537384)
+ /locus_tag="SARI_00538"
+ CDS complement(535942..537384)
+ /locus_tag="SARI_00538"
+ /inference="protein motif:HMMPfam:IPR002078"
+ /inference="protein motif:HMMPfam:IPR002197"
+ /inference="protein motif:HMMPfam:IPR013656"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR000014"
+ /inference="protein motif:ScanRegExp:IPR002078"
+ /inference="protein motif:superfamily:IPR008931"
+ /inference="similar to AA sequence:INSD:AAL21262.1"
+ /note="'KEGG: eci:UTI89_C2502 3.4e-60 atoC; acetoacetate
+ metabolism regulatory protein AtoC K07714;
+ COG: COG3829 Transcriptional regulator containing PAS,
+ AAA-type ATPase, and DNA-binding domains;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569606.1"
+ /db_xref="GI:161502494"
+ /db_xref="InterPro:IPR000014"
+ /db_xref="InterPro:IPR002078"
+ /db_xref="InterPro:IPR002197"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR008931"
+ /db_xref="InterPro:IPR013656"
+ /translation="MRNARMASTNQELASALRMFSRFFDLIHQPLAVINERGEYVYYN
+ QESADLDGYSIERAMGKHMLDVYPGMKEAQSTMLSSLKKGVEYIGHYQIYYNARGQAV
+ DYQHTTAPLYARDGGMVGVIEIGRNMSGVRRLQEQVVELNQLLYADHHEKHHAIITEN
+ PEMLSNIAKAKRLAASNIPVTIVGETGTGKELFSRLIHQCSKRANKPFIALNCGALPP
+ TLIESTLFGTVRGAYTGAENSQGYLELANGGTLFLDELNAMPIEMQSKLLRFLQDKTF
+ WRLGGQQQLHSDVRIVAAMNEAPVKLIQQERLRTDLFYRLSVGMLTLPPLRARPEDIP
+ LLANYFIDKYRNDVPQDIHGLSETARADLLNHAWPGNVRMLENAIVRSMIMQEKDGLL
+ KHIIFEQDELNLGVPETAPENPLPSSPDPQYEGSLEARVANYERHLIETALDTHQGNI
+ AAAARSLNVSRTTLQYKVQKYGIRFGVVRN"
+ misc_feature complement(536986..537315)
+ /locus_tag="SARI_00538"
+ /note="PAS fold; Region: PAS_4; pfam08448"
+ /db_xref="CDD:219845"
+ misc_feature complement(537001..537306)
+ /locus_tag="SARI_00538"
+ /note="PAS domain; PAS motifs appear in archaea,
+ eubacteria and eukarya. Probably the most surprising
+ identification of a PAS domain was that in EAG-like
+ K+-channels. PAS domains have been found to bind ligands,
+ and to act as sensors for light and oxygen in...; Region:
+ PAS; cl02459"
+ /db_xref="CDD:243045"
+ misc_feature complement(order(537088..537090,537178..537189,
+ 537226..537228,537244..537246,537256..537258))
+ /locus_tag="SARI_00538"
+ /note="putative active site [active]"
+ /db_xref="CDD:238075"
+ misc_feature complement(order(537061..537063,537067..537069,
+ 537142..537147,537154..537156,537184..537186,
+ 537196..537198))
+ /locus_tag="SARI_00538"
+ /note="heme pocket [chemical binding]; other site"
+ /db_xref="CDD:238075"
+ misc_feature complement(535972..536919)
+ /locus_tag="SARI_00538"
+ /note="psp operon transcriptional activator PspF; Region:
+ phageshock_pspF; TIGR02974"
+ /db_xref="CDD:234077"
+ misc_feature complement(536434..536904)
+ /locus_tag="SARI_00538"
+ /note="The AAA+ (ATPases Associated with a wide variety of
+ cellular Activities) superfamily represents an ancient
+ group of ATPases belonging to the ASCE (for additional
+ strand, catalytic E) division of the P-loop NTPase fold.
+ The ASCE division also includes ABC; Region: AAA; cd00009"
+ /db_xref="CDD:99707"
+ misc_feature complement(536812..536835)
+ /locus_tag="SARI_00538"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(order(536497..536499,536623..536625,
+ 536809..536832))
+ /locus_tag="SARI_00538"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(536620..536637)
+ /locus_tag="SARI_00538"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(536440..536442)
+ /locus_tag="SARI_00538"
+ /note="arginine finger; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(535972..536082)
+ /locus_tag="SARI_00538"
+ /note="Bacterial regulatory protein, Fis family; Region:
+ HTH_8; pfam02954"
+ /db_xref="CDD:202485"
+ gene 537580..538977
+ /locus_tag="SARI_00539"
+ CDS 537580..538977
+ /locus_tag="SARI_00539"
+ /inference="protein motif:HMMPfam:IPR000183"
+ /inference="protein motif:superfamily:IPR009006"
+ /inference="similar to AA sequence:REFSEQ:NP_456902.1"
+ /note="'KEGG: stt:t0504 7.3e-255 putative amino acid
+ decarboxylase K01586;
+ COG: COG0019 Diaminopimelate decarboxylase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569607.1"
+ /db_xref="GI:161502495"
+ /db_xref="InterPro:IPR000183"
+ /db_xref="InterPro:IPR009006"
+ /translation="MTDSIMQNYNQLREQVINGDRRFQHKDGHLCFEGVDLDALARQY
+ PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANS
+ QYEVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKL
+ KKVANVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMH
+ VGDQVPESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKD
+ NMYAGITAQDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDL
+ NGNVECHVEWKFVDAGYSVLSDSQHFDWFFYVYNASRITAAHDAWIKLAGPLCDGGDY
+ FHMGVKGEEFLLPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMIDKNGETRLI
+ RREDSYEDMVKYDIY"
+ misc_feature 537637..538902
+ /locus_tag="SARI_00539"
+ /note="Diaminopimelate decarboxylase [Amino acid transport
+ and metabolism]; Region: LysA; COG0019"
+ /db_xref="CDD:223098"
+ misc_feature 537709..538902
+ /locus_tag="SARI_00539"
+ /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
+ Enzymes; Region: PLPDE_III; cl00261"
+ /db_xref="CDD:241734"
+ misc_feature order(537811..537813,537817..537819,537943..537945,
+ 538084..538086,538225..538227,538231..538233,
+ 538498..538509)
+ /locus_tag="SARI_00539"
+ /note="pyridoxal 5'-phosphate (PLP) binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:143484"
+ misc_feature 537817..537819
+ /locus_tag="SARI_00539"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:143484"
+ gene 539062..540489
+ /locus_tag="SARI_00540"
+ CDS 539062..540489
+ /locus_tag="SARI_00540"
+ /inference="protein motif:HMMPanther:IPR002293"
+ /inference="protein motif:HMMPfam:IPR004841"
+ /inference="similar to AA sequence:INSD:AAL21260.1"
+ /note="'KEGG: eci:UTI89_C0120 1.3e-05 aroP; aromatic amino
+ acid transport protein AroP K03293;
+ COG: COG0531 Amino acid transporters;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative amino acid transporter"
+ /protein_id="YP_001569608.1"
+ /db_xref="GI:161502496"
+ /db_xref="InterPro:IPR002293"
+ /db_xref="InterPro:IPR004841"
+ /translation="MAMSNTNSGLLGIKDIVFMNVIAILSLRQIPNVAPYGASAMLLW
+ VIAAFCLFFPLAMVCGELSTGWPKDGGIFVWIKEAFGKRIAWIVVVCFLFSCVLFFPL
+ MLQFGFTALGYMIGGGLAENKAFIGIGSAVIFWLLTLMNIRGMEWTKIINSISAWCGV
+ FIPSAILILLAVVWLCTGHQMQTDYATAKNWIPDLGHWDTIVFLSSMMFAFAGLEVAP
+ MIAGRTRNPQRDFPRAMAVSAAVIVGIYMVGTWAINTLLPAGKTDIVAGVMQAMHAAA
+ DTLHMPWLIPVMAICMFFGALGQINSWLVGPIYMLQEASREDNLLGDRIGKLHPVWKT
+ PAFALTVQAIIVTVLCFSTFISPSVAAAYWMLTALTTITYFIPYLVMFPAFWRLRKTQ
+ PDTPRSFKIPGKVLPAILPALGFLSIAFAVALLFIPPSQIDMGGYFQYAGKIIGGAVL
+ AVVVAEFIYHRAQKRNARLGMAGGK"
+ misc_feature 539092..540381
+ /locus_tag="SARI_00540"
+ /note="putative glutamate/gamma-aminobutyrate antiporter;
+ Region: put_Glu_GABA_T; TIGR03813"
+ /db_xref="CDD:163525"
+ gene 540491..541594
+ /locus_tag="SARI_00541"
+ CDS 540491..541594
+ /locus_tag="SARI_00541"
+ /inference="protein motif:HMMPfam:IPR001608"
+ /inference="similar to AA sequence:INSD:AAV76508.1"
+ /note="'KEGG: bce:BC2063 4.0e-05 alanine racemase K01775;
+ COG: COG3457 Predicted amino acid racemase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569609.1"
+ /db_xref="GI:161502497"
+ /db_xref="InterPro:IPR001608"
+ /translation="MYMPVLEINLRKLEENARTEKALLASSGIEVMAVNKVFDGCVET
+ AQAVFNGGITVIAESRTYNLKKIRETGCTTCLLRSPCLSEIEDVVRYADISLNSEPVV
+ LRALSHEAQRQGKTHQVLLMVDMGDLREGIWFSEYQRILETITLIADLPALELYGLGT
+ NFNCYGTVLPTVKNGEDFLALAARLEADSGIPVRRLSAGNCTSYHLLDKGIWPHGLNH
+ LRIGGLHEFGIEYVDMKYLNEFHHSAKPVDKACSDMYILEAEIIELNSKPTVPVGELG
+ VDAFLQSKTFVDRGIRRRALLAFGRQDVPSDNCVPCDDAITILGQTSDHTLVDIEDCR
+ QPLKVGDVVRFELDYTGLLMACQTKGIAWRFTR"
+ misc_feature 540491..541591
+ /locus_tag="SARI_00541"
+ /note="Predicted amino acid racemase [Amino acid transport
+ and metabolism]; Region: COG3457"
+ /db_xref="CDD:225988"
+ misc_feature 540497..541585
+ /locus_tag="SARI_00541"
+ /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
+ Enzyme Alanine Racemase-like 1; Region:
+ PLPDE_III_AR_like_1; cd06815"
+ /db_xref="CDD:143490"
+ misc_feature order(540497..540499,540596..540598,540602..540604,
+ 540665..540670,540674..540679,540695..540697,
+ 540740..540742,540785..540787,540791..540793,
+ 540803..540805,540872..540883,541274..541285,
+ 541370..541372,541376..541378,541382..541384,
+ 541391..541396,541571..541573)
+ /locus_tag="SARI_00541"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:143490"
+ misc_feature order(540590..540592,540596..540598,540659..540661,
+ 540722..540724,540854..540856,540875..540877,
+ 540971..540973,541088..541093,541148..541159,
+ 541391..541393)
+ /locus_tag="SARI_00541"
+ /note="active site"
+ /db_xref="CDD:143490"
+ misc_feature order(540590..540592,540596..540598,540659..540661,
+ 540722..540724,540854..540856,540971..540973,
+ 541088..541093,541148..541159)
+ /locus_tag="SARI_00541"
+ /note="pyridoxal 5'-phosphate (PLP) binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:143490"
+ misc_feature order(540596..540598,540875..540877,540971..540973,
+ 541157..541159)
+ /locus_tag="SARI_00541"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:143490"
+ misc_feature 540596..540598
+ /locus_tag="SARI_00541"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:143490"
+ gene 541633..542961
+ /locus_tag="SARI_00542"
+ CDS 541633..542961
+ /locus_tag="SARI_00542"
+ /inference="protein motif:HMMPanther:IPR002293"
+ /inference="protein motif:HMMPfam:IPR004841"
+ /inference="similar to AA sequence:REFSEQ:YP_149821.1"
+ /note="'KEGG: eci:UTI89_C0120 2.6e-53 aroP; aromatic amino
+ acid transport protein AroP K03293;
+ COG: COG0833 Amino acid transporters;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569610.1"
+ /db_xref="GI:161502498"
+ /db_xref="InterPro:IPR002293"
+ /db_xref="InterPro:IPR004841"
+ /translation="MMSLGGTIGTGLFIGIAEPLSSVGPARALLAYLFAGAIMLATMM
+ CLGELSCAFPHSGSFQHYALMFMPSPVWSYTIGWLYWFSWGFSLAADLTAAGFIAHQF
+ FPAVPVYIFCLAILLILTVINFTSAKSFGECEYWLSAIKVFAIVLFICAGGVMIYSLM
+ GHSDWHPTLKTNGMWFPHGWEQIVVCMTIVIYSFQGGELVGNAAGETESPHAILPKVI
+ LGIGLRIILFYGLAIAVLALVYPHKLAPNGQSPFVWVFSHAGIPGADTLMTLVIFSAA
+ VSAANSAIYASSRMLWSMAGDRFAPACFGKTNGGGVPVYAILITVLLALVSLLTRYIP
+ AQQFYLYLIASTGQVGCLAWITIGWCQYRFRQSVCNGTYASDLLRYRSPLFPWTARFV
+ IITNFAIMVGTWFSEQGGVIMLVELAFMTGILLSWYLFRPTLSRLRNTVG"
+ misc_feature 541690..542925
+ /locus_tag="SARI_00542"
+ /note="gamma-aminobutyrate permease; Region: GABAperm;
+ TIGR01773"
+ /db_xref="CDD:233567"
+ gene 542988..543557
+ /locus_tag="SARI_00543"
+ CDS 542988..543557
+ /locus_tag="SARI_00543"
+ /inference="protein motif:Gene3D:IPR003382"
+ /inference="protein motif:HMMPfam:IPR003382"
+ /inference="protein motif:HMMTigr:IPR004507"
+ /inference="protein motif:superfamily:IPR003382"
+ /inference="similar to AA sequence:INSD:AAX66264.1"
+ /note="catalyzes the formation of 2-octaprenylphenol from
+ 3-octaprenyl-4-hydroxybenzoate"
+ /codon_start=1
+ /transl_table=11
+ /product="3-octaprenyl-4-hydroxybenzoate carboxy-lyase"
+ /protein_id="YP_001569611.1"
+ /db_xref="GI:161502499"
+ /db_xref="InterPro:IPR003382"
+ /db_xref="InterPro:IPR004507"
+ /translation="MKRLIVGISGASGAIYGVRLLQILRDVESVETHLVMSQAARQTL
+ ALETHFSLREVQALADVTHDARDIAASISSGSYPTAGMVILPCSIKTLSGIVHSYTDG
+ LLTRAADVILKERRPLVLCVRETPLHIGHLRLMTQAAEIGAVIMPPVPAFYHLPKTLD
+ DVINQTVNRVLDQFDIPLPHDLFVRWQGA"
+ misc_feature 542988..543548
+ /locus_tag="SARI_00543"
+ /note="3-octaprenyl-4-hydroxybenzoate carboxy-lyase;
+ Provisional; Region: PRK06029"
+ /db_xref="CDD:235677"
+ misc_feature 542991..543380
+ /locus_tag="SARI_00543"
+ /note="Flavoprotein; Region: Flavoprotein; pfam02441"
+ /db_xref="CDD:217035"
+ gene 543844..544626
+ /locus_tag="SARI_00544"
+ CDS 543844..544626
+ /locus_tag="SARI_00544"
+ /inference="protein motif:HMMPfam:IPR001638"
+ /inference="protein motif:HMMSmart:IPR001638"
+ /inference="protein motif:HMMTigr:IPR005768"
+ /inference="protein motif:ScanRegExp:IPR001638"
+ /inference="similar to AA sequence:INSD:AAV76511.1"
+ /note="'KEGG: bur:Bcep18194_A4695 3.4e-28 ABC polar amino
+ acid transporter, periplasmic ligand binding protein
+ K01713;
+ COG: COG0834 ABC-type amino acid transport/signal
+ transduction systems, periplasmic component/domain;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569612.1"
+ /db_xref="GI:161502500"
+ /db_xref="InterPro:IPR001638"
+ /db_xref="InterPro:IPR005768"
+ /translation="MKKTVLALSLLIGLGATAASYAALPQTVRIGTDTTYAPFSSKDA
+ KGDFVGFDIDVGNEMCQRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQE
+ IAFSDKLYAADSRLIAAKGSPIQPTLESLKGKHVGVLQGSTQEAYANDNWRTKGVNVV
+ AYANQDLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTG
+ VGLRKDDTELKAAFDKALAELREDGTYDKMAKKYFDFNVYGD"
+ misc_feature 543844..544623
+ /locus_tag="SARI_00544"
+ /note="ABC transporter lysine/arginine/ornithine binding
+ periplasmic protein; Provisional; Region: PRK15010"
+ /db_xref="CDD:184972"
+ misc_feature 543925..544602
+ /locus_tag="SARI_00544"
+ /note="Bacterial periplasmic transport systems use
+ membrane-bound complexes and substrate-bound,
+ membrane-associated, periplasmic binding proteins (PBPs)
+ to transport a wide variety of substrates, such as, amino
+ acids, peptides, sugars, vitamins and inorganic...;
+ Region: PBPb; cd00134"
+ /db_xref="CDD:238078"
+ misc_feature order(543949..543951,544063..544065,544138..544140,
+ 544270..544272,544390..544392)
+ /locus_tag="SARI_00544"
+ /note="substrate binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:238078"
+ misc_feature order(544339..544341,544351..544353,544369..544371)
+ /locus_tag="SARI_00544"
+ /note="membrane-bound complex binding site; other site"
+ /db_xref="CDD:238078"
+ misc_feature 544480..544497
+ /locus_tag="SARI_00544"
+ /note="hinge residues; other site"
+ /db_xref="CDD:238078"
+ gene 544864..545646
+ /locus_tag="SARI_00545"
+ CDS 544864..545646
+ /locus_tag="SARI_00545"
+ /inference="protein motif:HMMPfam:IPR001638"
+ /inference="protein motif:HMMSmart:IPR001638"
+ /inference="protein motif:HMMTigr:IPR005768"
+ /inference="protein motif:ScanRegExp:IPR001638"
+ /inference="similar to AA sequence:INSD:"
+ /note="'KEGG: bur:Bcep18194_A4695 6.8e-30 ABC polar amino
+ acid transporter, periplasmic ligand binding protein
+ K01713;
+ COG: COG0834 ABC-type amino acid transport/signal
+ transduction systems, periplasmic component/domain;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569613.1"
+ /db_xref="GI:161502501"
+ /db_xref="InterPro:IPR001638"
+ /db_xref="InterPro:IPR005768"
+ /translation="MKKLALSLSLVLAFSSATAAFAAIPQKIRIGTDPTYAPFESKNA
+ QGELVGFDIDLAKELCKRINTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKRQQE
+ IAFTDKLYAADSRLVVAKNSDIQPTVASLKGKRVGVLQGTTQETFGNEHWAPKGIEIV
+ SYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKTYKFGGPSVKDEKLFGVGTG
+ MGLRKEDNELRETLNKAFAEMRADGTYEKLAKKYFDFDVYGG"
+ misc_feature 544933..545640
+ /locus_tag="SARI_00545"
+ /note="histidine ABC transporter substrate-binding protein
+ HisJ; Provisional; Region: PRK15437"
+ /db_xref="CDD:185334"
+ misc_feature 544945..545622
+ /locus_tag="SARI_00545"
+ /note="Bacterial periplasmic transport systems use
+ membrane-bound complexes and substrate-bound,
+ membrane-associated, periplasmic binding proteins (PBPs)
+ to transport a wide variety of substrates, such as, amino
+ acids, peptides, sugars, vitamins and inorganic...;
+ Region: PBPb; cd00134"
+ /db_xref="CDD:238078"
+ misc_feature order(544969..544971,545083..545085,545158..545160,
+ 545290..545292,545410..545412)
+ /locus_tag="SARI_00545"
+ /note="substrate binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:238078"
+ misc_feature order(545359..545361,545371..545373,545389..545391)
+ /locus_tag="SARI_00545"
+ /note="membrane-bound complex binding site; other site"
+ /db_xref="CDD:238078"
+ misc_feature order(545491..545493,545503..545517)
+ /locus_tag="SARI_00545"
+ /note="hinge residues; other site"
+ /db_xref="CDD:238078"
+ gene 545829..546515
+ /locus_tag="SARI_00546"
+ CDS 545829..546515
+ /locus_tag="SARI_00546"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="protein motif:HMMTigr:IPR010065"
+ /inference="similar to AA sequence:INSD:AAL21254.1"
+ /note="'KEGG: sma:SAV6546 1.6e-23 putative ABC transporter
+ permease K02028;
+ COG: COG4215 ABC-type arginine transport system, permease
+ component;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569614.1"
+ /db_xref="GI:161502502"
+ /db_xref="InterPro:IPR000515"
+ /db_xref="InterPro:IPR010065"
+ /translation="MLYGFSGVILQGAIVTLELALSSVVLAVLIGLVGAGAKLSQNRV
+ TGLIFEGYTTLIRGVPDLVLMLLIFYGLQIALNVVTDSLGIEQIDIDPMVAGIITLGF
+ IYGAYFTETFRGAFMAVPKGHIEAATAFGFTRWQTFRRIMFPAMMRYALPGIGNNWQV
+ ILKATALVSLLGLEDVVKATQLAGKSTWEPFYFAVVCGLIYLVFTTVSNGVLLLLERR
+ YSVGVKRADL"
+ misc_feature 545829..546506
+ /locus_tag="SARI_00546"
+ /note="ABC-type arginine transport system, permease
+ component [Amino acid transport and metabolism]; Region:
+ ArtQ; COG4215"
+ /db_xref="CDD:226670"
+ misc_feature 545952..546452
+ /locus_tag="SARI_00546"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature order(545973..545984,545988..546017,546024..546029,
+ 546033..546035,546132..546137,546141..546143,
+ 546147..546149,546156..546161,546165..546167,
+ 546177..546182,546189..546191,546240..546242,
+ 546282..546287,546294..546296,546315..546326,
+ 546333..546338,546375..546380,546408..546413,
+ 546420..546425,546429..546434,546441..546446)
+ /locus_tag="SARI_00546"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(545991..546035,546315..546332)
+ /locus_tag="SARI_00546"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(546033..546035,546117..546119,546333..546335,
+ 546369..546371,546378..546380,546408..546410)
+ /locus_tag="SARI_00546"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(546192..546230,546246..546251,546261..546263)
+ /locus_tag="SARI_00546"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene 546512..547219
+ /locus_tag="SARI_00547"
+ CDS 546512..547219
+ /locus_tag="SARI_00547"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="protein motif:HMMTigr:IPR010065"
+ /inference="similar to AA sequence:INSD:AAO68218.1"
+ /note="'KEGG: sma:SAV6546 6.5e-25 putative ABC transporter
+ permease K02028;
+ COG: COG4160 ABC-type arginine/histidine transport system,
+ permease component;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569615.1"
+ /db_xref="GI:161502503"
+ /db_xref="InterPro:IPR000515"
+ /db_xref="InterPro:IPR010065"
+ /translation="MIEIIQEYWKSLLWTDGYRFTGVAITLWLLISSVVMGGLLAVIL
+ AVGRVSSNKFIRFPIWLFTYIFRGTPLYVQLLVFYSGMYTLEIVKGTDFLNAFFRSGL
+ NCTVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSSFKMYRCIILPSALRIAL
+ PAYSNEVILMLHSTALAFTATVPDLLKIARDINSATYQPFTAFGIAAVLYLLISYVLI
+ SLFRRAERRWLQHVSSK"
+ misc_feature 546569..547192
+ /locus_tag="SARI_00547"
+ /note="ABC-type arginine transport system, permease
+ component [Amino acid transport and metabolism]; Region:
+ ArtQ; COG4215"
+ /db_xref="CDD:226670"
+ misc_feature 546584..547075
+ /locus_tag="SARI_00547"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature order(546626..546631,546638..546643,546656..546658,
+ 546686..546697,546701..546730,546737..546742,
+ 546746..546748,546842..546847,546851..546853,
+ 546857..546859,546866..546871,546875..546877,
+ 546887..546892,546899..546901,546950..546952,
+ 546992..546997,547004..547006,547025..547036,
+ 547043..547048)
+ /locus_tag="SARI_00547"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(546704..546748,547025..547042)
+ /locus_tag="SARI_00547"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(546746..546748,546827..546829,547043..547045)
+ /locus_tag="SARI_00547"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(546902..546940,546956..546961,546971..546973)
+ /locus_tag="SARI_00547"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene 547230..548006
+ /locus_tag="SARI_00548"
+ CDS 547230..548006
+ /locus_tag="SARI_00548"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:INSD:AAL21252.1"
+ /note="'KEGG: stm:STM2351 1.0e-131 hisP; ABC superfamily
+ (atp_bind), histidine and lysine/arginine/orniTHIne
+ transport protein K02028;
+ COG: COG4598 ABC-type histidine transport system, ATPase
+ component;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="histidine/lysine/arginine/ornithine transporter
+ subunit"
+ /protein_id="YP_001569616.1"
+ /db_xref="GI:161502504"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MMSENKLNVIDLHKRYGGHEVLKGVSLQASAGDVISIIGSSGSG
+ KSTFLRCINFLEKPSEGAIIVNGQNINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHF
+ NLWSHMTVLENVMEAPVQVLGLSKHDARERALKYLAKVGIDERAQGKYPVHLSGGQQQ
+ RVSIARALAMEPDVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARH
+ VSSHVIFLHQGKIEEEGEPEQVFGNPQSPRLQQFLKGSLK"
+ misc_feature 547233..548003
+ /locus_tag="SARI_00548"
+ /note="histidine/lysine/arginine/ornithine transporter
+ subunit; Provisional; Region: PRK10619"
+ /db_xref="CDD:182592"
+ misc_feature 547248..547922
+ /locus_tag="SARI_00548"
+ /note="ATP-binding cassette domain of the histidine and
+ glutamine transporters; Region: ABC_HisP_GlnQ; cd03262"
+ /db_xref="CDD:213229"
+ misc_feature 547344..547367
+ /locus_tag="SARI_00548"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213229"
+ misc_feature order(547353..547358,547362..547370,547527..547529,
+ 547761..547766,547860..547862)
+ /locus_tag="SARI_00548"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213229"
+ misc_feature 547518..547529
+ /locus_tag="SARI_00548"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213229"
+ misc_feature 547689..547718
+ /locus_tag="SARI_00548"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213229"
+ misc_feature 547749..547766
+ /locus_tag="SARI_00548"
+ /note="Walker B; other site"
+ /db_xref="CDD:213229"
+ misc_feature 547773..547784
+ /locus_tag="SARI_00548"
+ /note="D-loop; other site"
+ /db_xref="CDD:213229"
+ misc_feature 547848..547868
+ /locus_tag="SARI_00548"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213229"
+ gene complement(548047..548940)
+ /locus_tag="SARI_00549"
+ CDS complement(548047..548940)
+ /locus_tag="SARI_00549"
+ /inference="protein motif:HMMPanther:IPR010099"
+ /inference="protein motif:HMMPfam:IPR001509"
+ /inference="protein motif:HMMPfam:IPR013549"
+ /inference="protein motif:HMMTigr:IPR010099"
+ /inference="similar to AA sequence:REFSEQ:NP_461292.1"
+ /note="'KEGG: ava:Ava_0206 9.2e-58 hypothetical protein;
+ COG: COG1090 Predicted nucleoside-diphosphate sugar
+ epimerase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569617.1"
+ /db_xref="GI:161502505"
+ /db_xref="InterPro:IPR001509"
+ /db_xref="InterPro:IPR010099"
+ /db_xref="InterPro:IPR013549"
+ /translation="MQILITGGTGLIGRHLIPRLLTLGHQVTVVTRNPYNARQIFDSR
+ VALWKGLAEREHLNEIDAIVNLAGEPIADKRWTPQQKERLCQSRWAITQKLVDLIHAS
+ ATPPAVLISGSATGYYGDLGDVVVTEDEPPHNEFTHKLCALWEQIACRAQSDQTRVCL
+ LRTGVVLAPQGGILGKMVPPFRLGLGGPVGNGRQYLPWIHIDDMVNGILWLLDNDLRG
+ PFNMVSPYPVHNEQFAHALGRALRRPAIIRIPATAIRLLMGESSVLVLGGQRALPKRL
+ EAAGFAFRWYDLEEALADVIR"
+ misc_feature complement(548050..548901)
+ /locus_tag="SARI_00549"
+ /note="Predicted nucleoside-diphosphate sugar epimerase
+ [General function prediction only]; Region: COG1090"
+ /db_xref="CDD:224015"
+ misc_feature complement(548053..548901)
+ /locus_tag="SARI_00549"
+ /note="atypical (a) SDRs, subgroup 8; Region: SDR_a8;
+ cd05242"
+ /db_xref="CDD:187553"
+ misc_feature complement(order(548443..548454,548518..548520,
+ 548530..548532,548599..548607,548680..548682,
+ 548737..548745,548842..548850))
+ /locus_tag="SARI_00549"
+ /note="putative NAD(P) binding site [chemical binding];
+ other site"
+ /db_xref="CDD:187553"
+ misc_feature complement(order(548518..548520,548530..548532,
+ 548602..548604,548677..548679))
+ /locus_tag="SARI_00549"
+ /note="putative active site [active]"
+ /db_xref="CDD:187553"
+ gene complement(549070..549717)
+ /locus_tag="SARI_00550"
+ CDS complement(549070..549717)
+ /locus_tag="SARI_00550"
+ /inference="protein motif:HMMPfam:IPR004045"
+ /inference="protein motif:HMMPfam:IPR004046"
+ /inference="protein motif:superfamily:IPR010987"
+ /inference="protein motif:superfamily:IPR012336"
+ /inference="similar to AA sequence:REFSEQ:NP_461291.1"
+ /note="'KEGG: eci:UTI89_C2586 4.3e-92 yfcG; putative
+ S-transferase K00799;
+ COG: COG0625 GlutaTHIone S-transferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569618.1"
+ /db_xref="GI:161502506"
+ /db_xref="InterPro:IPR004045"
+ /db_xref="InterPro:IPR004046"
+ /db_xref="InterPro:IPR010987"
+ /db_xref="InterPro:IPR012336"
+ /translation="MIDLYYAPTPNGHKITLFLEEAELAYRLLKVDISRGNQFRPDFL
+ AISPNNKIPAIVDHAPADGGQPLSLFESGEILLYLAEKSGKLLSGELRERHITLQWLF
+ WQVGGLGPMLGQNHHFNHFAPQTIPYAIERYQVETQRLYNVLNKRLEASPWLGGDHYS
+ IADIASWPWVNAHQRQRIDLDTYPAVYNWFERIRTRPATARAMLKAQLHCNSTEE"
+ misc_feature complement(549097..549717)
+ /locus_tag="SARI_00550"
+ /note="GSH-dependent disulfide bond oxidoreductase;
+ Provisional; Region: PRK13972"
+ /db_xref="CDD:172475"
+ misc_feature complement(549463..549717)
+ /locus_tag="SARI_00550"
+ /note="GST_N family, Ure2p-like subfamily; composed of the
+ Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is
+ a regulator for nitrogen catabolism in yeast. It represses
+ the expression of several gene products involved in the
+ use of poor nitrogen sources...; Region: GST_N_Ure2p_like;
+ cd03048"
+ /db_xref="CDD:239346"
+ misc_feature complement(order(549487..549489,549655..549660,
+ 549667..549669,549676..549678,549685..549690))
+ /locus_tag="SARI_00550"
+ /note="C-terminal domain interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:239346"
+ misc_feature complement(order(549502..549507,549559..549567,
+ 549685..549687))
+ /locus_tag="SARI_00550"
+ /note="GSH binding site (G-site) [chemical binding]; other
+ site"
+ /db_xref="CDD:239346"
+ misc_feature complement(order(549496..549498,549505..549510,
+ 549514..549516,549565..549567,549571..549576))
+ /locus_tag="SARI_00550"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:239346"
+ misc_feature complement(549112..549441)
+ /locus_tag="SARI_00550"
+ /note="C-terminal, alpha helical domain of Escherichia
+ coli YfcG Glutathione S-transferases and related
+ uncharacterized proteins; Region: GST_C_YfcG_like;
+ cd10291"
+ /db_xref="CDD:198324"
+ misc_feature complement(order(549112..549117,549121..549126,
+ 549130..549132,549211..549219,549223..549228,
+ 549235..549243,549406..549408,549415..549417,
+ 549424..549429,549436..549438))
+ /locus_tag="SARI_00550"
+ /note="N-terminal domain interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:198324"
+ misc_feature complement(order(549289..549291,549301..549303,
+ 549319..549324,549334..549336,549340..549342,
+ 549364..549369,549376..549378,549400..549405,
+ 549409..549414,549418..549423,549430..549435))
+ /locus_tag="SARI_00550"
+ /note="putative dimer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:198324"
+ misc_feature complement(order(549211..549213,549367..549369,
+ 549379..549381,549388..549393))
+ /locus_tag="SARI_00550"
+ /note="active site"
+ /db_xref="CDD:198324"
+ gene 549860..550504
+ /locus_tag="SARI_00551"
+ CDS 549860..550504
+ /locus_tag="SARI_00551"
+ /inference="protein motif:Gene3D:IPR012335"
+ /inference="protein motif:HMMPfam:IPR004045"
+ /inference="protein motif:superfamily:IPR010987"
+ /inference="protein motif:superfamily:IPR012336"
+ /inference="similar to AA sequence:REFSEQ:NP_461290.1"
+ /note="'KEGG: eci:UTI89_C2585 6.3e-91 yfcF; hypothetical
+ protein K00799;
+ COG: COG0625 GlutaTHIone S-transferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569619.1"
+ /db_xref="GI:161502507"
+ /db_xref="InterPro:IPR004045"
+ /db_xref="InterPro:IPR010987"
+ /db_xref="InterPro:IPR012335"
+ /db_xref="InterPro:IPR012336"
+ /translation="MSKPVIVLWSDASFFSPYVLSAWVALQEKGLSFMLKTRDLGKGE
+ HLQPSWRGYALTQRVPVLETDDFELSESSAIAEYLEERFAPPQWERIYPHDLQKRARA
+ RQIQAWLRSDLLPLREERPTDVVFSGAKKAPLSEAGKASAAKLFATAEALLGQGTQNL
+ FGEWCIADTDLALMINRLALHGDDVPASLAEYATFQWQRASVQRFIALSAKRSG"
+ misc_feature 549860..550501
+ /locus_tag="SARI_00551"
+ /note="glutathione S-transferase; Provisional; Region:
+ PRK15113"
+ /db_xref="CDD:185068"
+ misc_feature 549875..550099
+ /locus_tag="SARI_00551"
+ /note="Glutathione S-transferase (GST) family, N-terminal
+ domain; a large, diverse group of cytosolic dimeric
+ proteins involved in cellular detoxification by catalyzing
+ the conjugation of glutathione (GSH) with a wide range of
+ endogenous and xenobiotic...; Region: GST_N_family;
+ cd00570"
+ /db_xref="CDD:238319"
+ misc_feature order(549911..549913,549917..549922,549926..549931,
+ 549938..549943,550076..550078,550085..550090)
+ /locus_tag="SARI_00551"
+ /note="C-terminal domain interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:238319"
+ misc_feature order(549911..549913,550031..550039,550070..550075)
+ /locus_tag="SARI_00551"
+ /note="GSH binding site (G-site) [chemical binding]; other
+ site"
+ /db_xref="CDD:238319"
+ misc_feature order(550031..550033,550067..550072,550076..550081,
+ 550088..550090)
+ /locus_tag="SARI_00551"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238319"
+ misc_feature 550145..550486
+ /locus_tag="SARI_00551"
+ /note="C-terminal, alpha helical domain of an unknown
+ subfamily 4 of Glutathione S-transferases; Region:
+ GST_C_4; cd03195"
+ /db_xref="CDD:198304"
+ misc_feature order(550166..550168,550175..550177,550187..550189,
+ 550208..550210,550223..550228,550235..550240,
+ 550349..550351,550355..550357,550364..550369,
+ 550376..550378,550388..550390,550448..550450,
+ 550454..550456,550460..550465,550469..550474,
+ 550481..550486)
+ /locus_tag="SARI_00551"
+ /note="N-terminal domain interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:198304"
+ misc_feature order(550166..550171,550178..550183,550190..550192,
+ 550301..550303)
+ /locus_tag="SARI_00551"
+ /note="putative dimer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:198304"
+ misc_feature order(550187..550189,550199..550204,550211..550216,
+ 550379..550381,550388..550390)
+ /locus_tag="SARI_00551"
+ /note="putative substrate binding pocket (H-site)
+ [chemical binding]; other site"
+ /db_xref="CDD:198304"
+ gene 550560..551111
+ /locus_tag="SARI_00552"
+ CDS 550560..551111
+ /locus_tag="SARI_00552"
+ /inference="protein motif:HMMPfam:IPR004843"
+ /inference="protein motif:HMMPIR:IPR000979"
+ /inference="protein motif:HMMTigr:IPR000979"
+ /inference="protein motif:ScanRegExp:IPR000979"
+ /inference="similar to AA sequence:INSD:AAV76519.1"
+ /note="'KEGG: eci:UTI89_C2584 9.4e-81 yfcE; hypothetical
+ protein;
+ COG: COG0622 Predicted phosphoesterase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphodiesterase"
+ /protein_id="YP_001569620.1"
+ /db_xref="GI:161502508"
+ /db_xref="InterPro:IPR000979"
+ /db_xref="InterPro:IPR004843"
+ /translation="MKLMFASDIHGSLPATERVLERFAQSGARWLVILGDVLNHGPRN
+ ALPEGYAPIQVAERLNAVATQIIAVRGNCDSEVDQMLLHFPITAPWQQILTQERRLFL
+ THGHLFGPTNLPALNAGDVVVYGHTHLPVAQQQEGLYHFNPGSVSIPKGGYTASYGIL
+ DDNVLSVIALNDQSIIAQVAINS"
+ misc_feature 550563..551042
+ /locus_tag="SARI_00552"
+ /note="Escherichia coli YfcE and related proteins,
+ metallophosphatase domain; Region: MPP_YfcE; cd00841"
+ /db_xref="CDD:163617"
+ misc_feature 550563..550949
+ /locus_tag="SARI_00552"
+ /note="Calcineurin-like phosphoesterase; Region:
+ Metallophos; pfam00149"
+ /db_xref="CDD:215750"
+ misc_feature order(550581..550583,550587..550589,550665..550667,
+ 550773..550778,550869..550871,550935..550937,
+ 550941..550943)
+ /locus_tag="SARI_00552"
+ /note="active site"
+ /db_xref="CDD:163617"
+ misc_feature order(550581..550583,550587..550589,550665..550667,
+ 550773..550775,550869..550871,550935..550937,
+ 550941..550943)
+ /locus_tag="SARI_00552"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:163617"
+ misc_feature order(550644..550649,550758..550760,550767..550781,
+ 550824..550844,550845..550856,550875..550877)
+ /locus_tag="SARI_00552"
+ /note="homotetramer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:163617"
+ gene 551169..551723
+ /locus_tag="SARI_00553"
+ CDS 551169..551723
+ /locus_tag="SARI_00553"
+ /inference="protein motif:BlastProDom:IPR002667"
+ /inference="protein motif:Gene3D:IPR000086"
+ /inference="protein motif:HMMPfam:IPR000086"
+ /inference="protein motif:superfamily:IPR000086"
+ /inference="similar to AA sequence:INSD:AAL21247.1"
+ /note="'KEGG: ssn:SSO_2356 4.7e-86 putative regulator;
+ COG: COG0494 NTP pyrophosphohydrolases including oxidative
+ damage repair enzymes;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569621.1"
+ /db_xref="GI:161502509"
+ /db_xref="InterPro:IPR000086"
+ /db_xref="InterPro:IPR002667"
+ /translation="MVEQRRLAGTEWVDIVNEDNEVIAQSSREQMRAQRLRHRATYIV
+ VHDGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFA
+ EHGLFYFEDQYCRVWGALFSCVSHGPFALQEDEVSEVCWLTPEEITARCDEFTPDSLK
+ ALALWMTRNAKNEAALQEKPEETE"
+ misc_feature 551172..551711
+ /locus_tag="SARI_00553"
+ /note="NUDIX hydrolase YfcD; Provisional; Region:
+ PRK15393"
+ /db_xref="CDD:185291"
+ misc_feature 551283..551654
+ /locus_tag="SARI_00553"
+ /note="Members of the Nudix hydrolase superfamily catalyze
+ the hydrolysis of NUcleoside DIphosphates linked to other
+ moieties, X. Enzymes belonging to this superfamily require
+ a divalent cation, such as Mg2+ or Mn2+, for their
+ activity and contain a highly...; Region:
+ Nudix_Hydrolase_38; cd04697"
+ /db_xref="CDD:240053"
+ misc_feature 551388..551456
+ /locus_tag="SARI_00553"
+ /note="nudix motif; other site"
+ /db_xref="CDD:240053"
+ gene complement(551729..552748)
+ /locus_tag="SARI_00554"
+ CDS complement(551729..552748)
+ /locus_tag="SARI_00554"
+ /inference="protein motif:HMMPfam:IPR000843"
+ /inference="protein motif:HMMPfam:IPR001761"
+ /inference="protein motif:HMMSmart:IPR000843"
+ /inference="protein motif:ScanRegExp:IPR000843"
+ /inference="protein motif:superfamily:IPR010982"
+ /inference="similar to AA sequence:INSD:AAL21246.1"
+ /note="'KEGG: efa:EF1922 1.4e-06 transcriptional
+ regulator, LacI family/carbohydrate kinase, PfkB family
+ protein K00852;
+ COG: COG1609 Transcriptional regulators;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative transcriptional regulator"
+ /protein_id="YP_001569622.1"
+ /db_xref="GI:161502510"
+ /db_xref="InterPro:IPR000843"
+ /db_xref="InterPro:IPR001761"
+ /db_xref="InterPro:IPR010982"
+ /translation="MSIPRKRRSTGKVTIADVAQLAGVGTMTVSRALRTPDQVSAKLR
+ EKIEAAVHELGYMPNLAASALASASSHTIAMVVPNLAEAGCSEMFAGLQQILQPAGYQ
+ IMLAESQHRVEQEEKLLETLLASNIAAAILLSVEHSDTVRQWLKNASIPVMEMGAIRS
+ DPIDMNIGIDNVAAMYELTEMLIQRGYQNIGLLCANQEQWIFQQHLHGWYKAMLRYHM
+ SPSRVINAALPPNFSTGASQLPEFLLAWPELDALVCVSDELACGVLYECQRRRIKVPD
+ DLAVVGFGDSDVSRVCQPPLTTMTVPHRKIGSEAGRALLERLNQGNWSDRKSIASSLC
+ MRESC"
+ misc_feature complement(551732..552712)
+ /locus_tag="SARI_00554"
+ /note="Transcriptional regulators [Transcription]; Region:
+ PurR; COG1609"
+ /db_xref="CDD:224525"
+ misc_feature complement(552572..552703)
+ /locus_tag="SARI_00554"
+ /note="Helix-turn-helix (HTH) DNA binding domain of the
+ LacI family of transcriptional regulators; Region:
+ HTH_LacI; cd01392"
+ /db_xref="CDD:143331"
+ misc_feature complement(order(552572..552574,552581..552583,
+ 552620..552622,552629..552634,552647..552649,
+ 552656..552661,552665..552679,552701..552703))
+ /locus_tag="SARI_00554"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:143331"
+ misc_feature complement(551735..552535)
+ /locus_tag="SARI_00554"
+ /note="Ligand-binding domain of DNA transcription
+ repressor GntR specific for gluconate, a member of the
+ LacI-GalR family of bacterial transcription regulators;
+ Region: PBP1_GntR; cd01575"
+ /db_xref="CDD:107260"
+ misc_feature complement(order(551942..551947,551954..551956,
+ 551966..551968,552050..552052,552371..552379,
+ 552386..552388,552395..552397,552428..552430,
+ 552434..552448,552467..552472,552476..552481,
+ 552488..552496,552533..552535))
+ /locus_tag="SARI_00554"
+ /note="putative dimerization interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:107260"
+ misc_feature complement(order(551846..551848,551897..551899,
+ 552059..552061,552134..552136,552242..552244,
+ 552281..552283,552350..552352,552485..552487,
+ 552494..552499))
+ /locus_tag="SARI_00554"
+ /note="putative ligand binding site [chemical binding];
+ other site"
+ /db_xref="CDD:107260"
+ gene complement(552829..553002)
+ /locus_tag="SARI_00556"
+ CDS complement(552829..553002)
+ /locus_tag="SARI_00556"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569623.1"
+ /db_xref="GI:161502512"
+ /translation="MLFAPTVYQIMNKLYSSHSILAAIVITKIALPETITQNCDSAIK
+ LKSSCEITAKKRI"
+ gene 553001..553444
+ /locus_tag="SARI_00555"
+ CDS 553001..553444
+ /locus_tag="SARI_00555"
+ /inference="protein motif:BlastProDom:IPR002178"
+ /inference="protein motif:Gene3D:IPR002178"
+ /inference="protein motif:HMMPfam:IPR002178"
+ /inference="similar to AA sequence:INSD:AAV76522.1"
+ /note="'KEGG: spt:SPA0520 1.9e-73 putative sugar
+ phosphotransferase component II A K02821;
+ COG: COG1762 Phosphotransferase system
+ mannitol/fructose-specific IIA domain (Ntr-type);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569624.1"
+ /db_xref="GI:161502511"
+ /db_xref="InterPro:IPR002178"
+ /translation="MLGTWLSDATITLQESVETWQQALEICGKPLLDAGVITPEYITA
+ IVQQHQKLGPYYVLAPGLAMPHARPEEGAKGLGLSLLKLQRGVSFGADEFDPVDIIIM
+ LAAPDKHSHIEMISALAELFSSDVDMEKLHQAKNLEDIKKIIDRF"
+ misc_feature 553016..553432
+ /locus_tag="SARI_00555"
+ /note="PTS_IIA, PTS system, fructose/mannitol specific IIA
+ subunit. The bacterial phosphoenolpyruvate: sugar
+ phosphotransferase system (PTS) is a multi-protein system
+ involved in the regulation of a variety of metabolic and
+ transcriptional processes. This...; Region: PTS_IIA_fru;
+ cd00211"
+ /db_xref="CDD:238129"
+ misc_feature order(553142..553144,553196..553198)
+ /locus_tag="SARI_00555"
+ /note="active site"
+ /db_xref="CDD:238129"
+ misc_feature 553196..553198
+ /locus_tag="SARI_00555"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238129"
+ gene 553526..553798
+ /locus_tag="SARI_00557"
+ CDS 553526..553798
+ /locus_tag="SARI_00557"
+ /inference="protein motif:HMMPfam:IPR003501"
+ /inference="similar to AA sequence:INSD:"
+ /note="'KEGG: spt:SPA0521 1.9e-41 putative sugar
+ phosphotransferase component II B K02822;
+ COG: COG3414 Phosphotransferase system,
+ galactitol-specific IIB component;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569625.1"
+ /db_xref="GI:161502513"
+ /db_xref="InterPro:IPR003501"
+ /translation="MKIMAICGSGLGSSFMVEMNIKKILKKLNIDAEVEHSDLSSATP
+ GAADLFVMAKDIAASASVPESQLVVINNIIDINELETQLRAWFAKQ"
+ misc_feature 553529..553786
+ /locus_tag="SARI_00557"
+ /note="PTS_IIB_ascorbate: subunit IIB of enzyme II (EII)
+ of the L-ascorbate-specific
+ phosphoenolpyruvate:carbohydrate phosphotransferase system
+ (PTS). In this system, EII is an L-ascorbate-specific
+ permease with two cytoplasmic subunits (IIA and IIB) and
+ a...; Region: PTS_IIB_ascorbate; cd05563"
+ /db_xref="CDD:99905"
+ misc_feature order(553544..553546,553550..553555,553562..553567)
+ /locus_tag="SARI_00557"
+ /note="active site"
+ /db_xref="CDD:99905"
+ misc_feature order(553544..553555,553559..553567)
+ /locus_tag="SARI_00557"
+ /note="P-loop; other site"
+ /db_xref="CDD:99905"
+ misc_feature 553544..553546
+ /locus_tag="SARI_00557"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:99905"
+ gene 553819..555210
+ /gene="ulaA"
+ /locus_tag="SARI_00558"
+ CDS 553819..555210
+ /gene="ulaA"
+ /locus_tag="SARI_00558"
+ /inference="protein motif:HMMPfam:IPR007333"
+ /inference="similar to AA sequence:REFSEQ:NP_461284.1"
+ /note="membrane component; functions with enzymes IIB
+ (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for
+ anaerobic utilization and uptake of L-ascorbate; sgaTBA
+ are regulated by yifQ as well as Crp and Fnr"
+ /codon_start=1
+ /transl_table=11
+ /product="PTS system ascorbate-specific transporter
+ subunit IIC"
+ /protein_id="YP_001569626.1"
+ /db_xref="GI:161502514"
+ /db_xref="InterPro:IPR007333"
+ /translation="MFILETLNFVVDILKVPSVLVGLIALIGLVAQKKAFSDVVKGTI
+ KTILGFIVLGGGATVLVGSLNPLGGMFEHAFNIQGIIPNNEAIVSIALEKYGASTALI
+ MAFGMVANIVVARFTRLKYIFLTGHHTFYMACMIGVILTVAGFEGVGLVFTGSLILGL
+ VMAFFPALAQRYMRQITGTDDIAFGHFGTLGYVLSGWIGSLCGKGSRSTEEMNLPKNL
+ SFLRDSSISISLTMMIIYLIMAVSAGRDYVEATFSGGQNYLVYAIIMAITFAAGVFII
+ LQGVRLILAEIVPAFTGFSEKLVPNARPALDCPVVYPYAPNAVLIGFLFSFLGGLVGL
+ FLLGQMKLVLILPGVVPHFFTGATAGVFGNATGGRRGAMIGAFANGLLITFLPVLLLP
+ VLGAIGFANTTFSDADFGAIGILLGNLARYLSPMAITGLVVALFALLVAYNVLAKNKK
+ ANAEVQENSGAKE"
+ misc_feature 553819..555207
+ /gene="ulaA"
+ /locus_tag="SARI_00558"
+ /note="PTS system ascorbate-specific transporter subunit
+ IIC; Reviewed; Region: ulaA; PRK12996"
+ /db_xref="CDD:171824"
+ gene 555207..556037
+ /locus_tag="SARI_00559"
+ CDS 555207..556037
+ /locus_tag="SARI_00559"
+ /inference="protein motif:HMMPfam:IPR005474"
+ /inference="protein motif:HMMPIR:IPR012058"
+ /inference="similar to AA sequence:INSD:AAL21242.1"
+ /note="'KEGG: stm:STM2341 3.0e-146 putative transketolase
+ K00615;
+ COG: COG3959 Transketolase, N-terminal subunit;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569627.1"
+ /db_xref="GI:161502515"
+ /db_xref="InterPro:IPR005474"
+ /db_xref="InterPro:IPR012058"
+ /translation="MNVTEITQLAREIRVATLKSLTHLGFGHYGGSMSVVETLAVLYG
+ AVMKIDPADPDWPERDYFVLSKGHAGPALYSTLAIKGYFPREELNTLNQNGTRLPSHP
+ DRLKTRGVDATTGSLGQGISIAGGMALSHKLARRPNRVFCIVGDGELNEGQCWEAFQF
+ IAHHRLNNLTVFIDWNKQQLDGELEEIINPFDLEGKFRAFGFDVVTVKGDDIAGLLAV
+ VQPVPPADAQPRVVILDSIKGQGVPCLEQLTNSHHLRLTDDMKQTLNEAIHQLEVTHD
+ "
+ misc_feature 555237..555986
+ /locus_tag="SARI_00559"
+ /note="Thiamine pyrophosphate (TPP) family, Transketolase
+ (TK) subfamily, TPP-binding module; TK catalyzes the
+ transfer of a two-carbon unit from ketose phosphates to
+ aldose phosphates. In heterotrophic organisms, TK provides
+ a link between glycolysis and the...; Region: TPP_TK;
+ cd02012"
+ /db_xref="CDD:238970"
+ misc_feature order(555408..555410,555549..555551,555555..555557,
+ 555642..555647,555657..555659,555732..555734,
+ 555738..555740,555744..555746,555960..555962)
+ /locus_tag="SARI_00559"
+ /note="TPP-binding site [chemical binding]; other site"
+ /db_xref="CDD:238970"
+ misc_feature order(555480..555482,555504..555509,555513..555515,
+ 555552..555557,555561..555563,555651..555662,
+ 555669..555674,555681..555683,555693..555695,
+ 555741..555746,555792..555794)
+ /locus_tag="SARI_00559"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238970"
+ gene 556030..556983
+ /locus_tag="SARI_00560"
+ CDS 556030..556983
+ /locus_tag="SARI_00560"
+ /inference="protein motif:Gene3D:IPR009014"
+ /inference="protein motif:HMMPfam:IPR005475"
+ /inference="protein motif:HMMPfam:IPR005476"
+ /inference="protein motif:HMMPIR:IPR012068"
+ /inference="protein motif:superfamily:IPR009014"
+ /inference="similar to AA sequence:INSD:AAL21241.1"
+ /note="'KEGG: stm:STM2340 2.7e-161 putative transketolase
+ K00615;
+ COG: COG3958 Transketolase, C-terminal subunit;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569628.1"
+ /db_xref="GI:161502516"
+ /db_xref="InterPro:IPR005475"
+ /db_xref="InterPro:IPR005476"
+ /db_xref="InterPro:IPR009014"
+ /db_xref="InterPro:IPR012068"
+ /translation="MIKLAPAGLKDNIEMRKVYAGFVARQIEAGSPIIALEADLMSSM
+ AMDSVARDYPQHVINCGIMEANVIGTAAGLALTGRKPFVHTFTAFASRRCFDQLFMAL
+ DYQRNNVKVIASDAGVTACHNGGTHMSFEDMGIVRGLAHSVVLEVTDTVMFADILRQL
+ MDLDGFYWLRTIRKQAPSIYAPGSTFTIGKGNVLREGDDITLIANGIMVAEALEAARQ
+ LEQEGVSAAVIDMFTLKPIDRMLVKNYAEKTRRIVTCENHSIHNGLGSAVAEVLVENC
+ PVPMRRVGVKERYGQVGTQDFLQKEYGLTAAAIVEAAKSML"
+ misc_feature 556048..556980
+ /locus_tag="SARI_00560"
+ /note="Transketolase, C-terminal subunit [Carbohydrate
+ transport and metabolism]; Region: COG3958"
+ /db_xref="CDD:226467"
+ misc_feature 556078..556548
+ /locus_tag="SARI_00560"
+ /note="Pyrimidine (PYR) binding domain of
+ 1-deoxy-D-xylulose-5-phosphate synthase (DXS),
+ transketolase (TK), and related proteins; Region:
+ TPP_PYR_DXS_TK_like; cd07033"
+ /db_xref="CDD:132916"
+ misc_feature order(556120..556122,556126..556128,556144..556146,
+ 556195..556197,556204..556206,556210..556227,
+ 556234..556239,556243..556251,556306..556308,
+ 556315..556320,556396..556398,556405..556407,
+ 556453..556458,556519..556521)
+ /locus_tag="SARI_00560"
+ /note="PYR/PP interface [polypeptide binding]; other site"
+ /db_xref="CDD:132916"
+ misc_feature order(556144..556146,556204..556206,556213..556221,
+ 556303..556308,556312..556314,556396..556398,
+ 556402..556404,556429..556434,556438..556443,
+ 556447..556449)
+ /locus_tag="SARI_00560"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:132916"
+ misc_feature order(556213..556215,556219..556221,556297..556299,
+ 556306..556308)
+ /locus_tag="SARI_00560"
+ /note="TPP binding site [chemical binding]; other site"
+ /db_xref="CDD:132916"
+ misc_feature 556594..556956
+ /locus_tag="SARI_00560"
+ /note="Transketolase, C-terminal domain; Region:
+ Transketolase_C; pfam02780"
+ /db_xref="CDD:217227"
+ gene complement(557032..558552)
+ /locus_tag="SARI_00561"
+ CDS complement(557032..558552)
+ /locus_tag="SARI_00561"
+ /inference="protein motif:HMMPfam:IPR004669"
+ /inference="similar to AA sequence:REFSEQ:NP_804382.1"
+ /note="'COG: COG1288 Predicted membrane protein;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569629.1"
+ /db_xref="GI:161502517"
+ /db_xref="InterPro:IPR004669"
+ /translation="MSVVTESKPARKWAMPDTLVIIFFVAILTSIATWVVPVGMFDSQ
+ EVQYQVDGQTKTRKVVDPHSFRIVTNEAGEAQYHRVQFFTTGDERPGLMNFPFEGLTS
+ GSKFGTAVGIIMFMLVIGGAFGIVMRTGTVDNGILALIRHTRGNEVLFIPVLFVLFSL
+ GGAVFGMGEEAVAFAIIIAPLMVRLGYDSITTVLVTYIATQIGFASSWMNPFCVVVAQ
+ GIAGVPVLSGSGLRIVVWIVATLIGLVFTLVYASRVKKNPQLSRVHESDRYFREQQDE
+ VVQRPFTFGDWLVLLVLTGVMIWVVWGVIVHAWFIPEIASQFFTMGVVIGLIGVIFRL
+ NGMTVNVMASSFTEGARMMIAPALLVGFAKGILLLVGNGEAGEPSVLNTLLNSIAHGI
+ SGLNNAIAAWFMLLFQAVFNFFVTSGSGQAALTMPLLAPLGDLVGVNRQVTVLAFQFG
+ DGFSHIIYPTSASLMATLGVCRVDFRNWLKVGASLLGLLFIMSSVVVIGAQMMGYH"
+ misc_feature complement(557035..558552)
+ /locus_tag="SARI_00561"
+ /note="hypothetical protein; Provisional; Region:
+ PRK11588"
+ /db_xref="CDD:236934"
+ misc_feature complement(557050..558510)
+ /locus_tag="SARI_00561"
+ /note="C4-dicarboxylate anaerobic carrier; Region: DcuC;
+ pfam03606"
+ /db_xref="CDD:217636"
+ gene complement(558776..560905)
+ /locus_tag="SARI_00562"
+ CDS complement(558776..560905)
+ /locus_tag="SARI_00562"
+ /inference="protein motif:HMMPfam:IPR002505"
+ /inference="protein motif:HMMPfam:IPR010766"
+ /inference="protein motif:HMMTigr:IPR004614"
+ /note="catalyzes the synthesis of acetylphosphate or
+ propionylphosphate from acetyl-CoA or propionyl-CoA and
+ inorganic phosphate; when using propionyl-CoA the enzyme
+ is functioning in the anaerobic pathway catabolizing
+ threonine to propionate"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphate acetyltransferase"
+ /protein_id="YP_001569630.1"
+ /db_xref="GI:161502518"
+ /db_xref="InterPro:IPR002505"
+ /db_xref="InterPro:IPR004614"
+ /db_xref="InterPro:IPR010766"
+ /translation="MLIPTGTSVGLTSVSLGVIRAMERKGVRLSVFKPIAQPRAGGDA
+ PDQTTTIVRANSTLPAAEPLKMSHVESLLSSNQKDVLMEEIIANYHANTKDAEVVLVE
+ GLVPTRKHQFAQSLNYEIAKTLNAEIVFVMSQGTDTPEQLNERIELTRSSFGGAKNTN
+ ITGVIVNKLNAPVDEQGRTRPDLSEIFDDSSKAQVIKIDPAKLQESSPLPVLGAVPWS
+ FDLIATRAIDMARHLNATIINEGDIKTRRVKSVTFCARSIPHMLEHFRAGSLLVTSAD
+ RPDVLVAACLAAMNGVEIGALLLTGGYEMDARISKLCERAFATGLPVFMVNTNTWQTS
+ LSLQSFNLEVPVDDHERIEKVQEYVANYINADWVESLTATSERSRRLSPPAFRYQLTE
+ LARKAGKRVVLPEGDEPRTVKAAAICAERGIATCVLLGNPDEINRVAASQGVELGAGI
+ EIVDPEVVRESYVARLVELRKSKGMTEPVAREQLEDNVVLGTLMLEQDEVDGLVSGAV
+ HTTANTIRPPLQLIKTAPGSSLVSSVFFMLLPEQVYVYGDCAINPDPTAEQLAEIAIQ
+ SADSAIAFGIEPRVAMLSYSTGTSGAGSDVEKVREATRLAQEKRPDLMIDGPLQYDAA
+ VMADVAKSKAPNSPVAGRATVFIFPDLNTGNTTYKAVQRSADLISIGPMLQGMRKPVN
+ DLSRGALVDDIVYTIALTAIQASQQQQ"
+ misc_feature complement(558791..560905)
+ /locus_tag="SARI_00562"
+ /note="phosphate acetyltransferase; Reviewed; Region:
+ PRK05632"
+ /db_xref="CDD:235537"
+ misc_feature complement(560186..560893)
+ /locus_tag="SARI_00562"
+ /note="The Fer4_NifH superfamily contains a variety of
+ proteins which share a common ATP-binding domain.
+ Functionally, proteins in this superfamily use the energy
+ from hydrolysis of NTP to transfer electron or ion;
+ Region: Fer4_NifH; cl17203"
+ /db_xref="CDD:247757"
+ misc_feature complement(559886..560224)
+ /locus_tag="SARI_00562"
+ /note="DRTGG domain; Region: DRTGG; pfam07085"
+ /db_xref="CDD:219291"
+ misc_feature complement(558803..559705)
+ /locus_tag="SARI_00562"
+ /note="phosphate acetyltransferase; Region: pta;
+ TIGR00651"
+ /db_xref="CDD:233072"
+ gene complement(560997..562199)
+ /locus_tag="SARI_00563"
+ CDS complement(560997..562199)
+ /locus_tag="SARI_00563"
+ /inference="protein motif:HMMPanther:IPR000890"
+ /inference="protein motif:HMMPfam:IPR000890"
+ /inference="protein motif:HMMPIR:IPR004372"
+ /inference="protein motif:HMMTigr:IPR004372"
+ /inference="protein motif:ScanRegExp:IPR000890"
+ /inference="similar to AA sequence:INSD:CAD07569.1"
+ /note="AckA utilizes acetate and can acetylate CheY which
+ increases signal strength during flagellar rotation;
+ utilizes magnesium and ATP; also involved in conversion of
+ acetate to aceyl-CoA"
+ /codon_start=1
+ /transl_table=11
+ /product="acetate kinase"
+ /protein_id="YP_001569631.1"
+ /db_xref="GI:161502519"
+ /db_xref="InterPro:IPR000890"
+ /db_xref="InterPro:IPR004372"
+ /translation="MSSKLVLVLNCGSSSLKFAIIDAVNGDEYLSGLAECFHLPEARI
+ KWKMDGSKQEAALGAGAAHSEALNFIVNTILAQKPELSAQLTAIGHRIVHGGEKYTSS
+ VVIDESVIQGIKDSASFAPLHNPAHLIGIAEALKSFPQLKDKNVAVFDTAFHQTMPEE
+ SYLYALPYSLYKEHGVRRYGAHGTSHFYVTQEAAKMLNKPVEELNIITCHLGNGGSVS
+ AIRNGKCVDTSMGLTPLEGLVMGTRSGDIDPAIIFHLHDTLGMSVDQINKMLTKESGL
+ LGLTEVTSDCRYVEDNYATKEDAKRAMDVYCHRLAKYIGSYTALMDGRLDAVVFTGGI
+ GENAAMVRELSLGKLGVLGFEVDHERNLAARFGKSGFINKEGTRPAVVIPTNEELVIA
+ QDASRLTA"
+ misc_feature complement(561006..562199)
+ /locus_tag="SARI_00563"
+ /note="propionate/acetate kinase; Provisional; Region:
+ PRK12379"
+ /db_xref="CDD:183484"
+ misc_feature complement(561003..562190)
+ /locus_tag="SARI_00563"
+ /note="acetate kinase A/propionate kinase 2; Reviewed;
+ Region: PRK00180"
+ /db_xref="CDD:234680"
+ gene 562617..562994
+ /locus_tag="SARI_00564"
+ CDS 562617..562994
+ /locus_tag="SARI_00564"
+ /inference="protein motif:HMMPfam:IPR007334"
+ /inference="similar to AA sequence:INSD:AAV76530.1"
+ /note="'COG: COG3092 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569632.1"
+ /db_xref="GI:161502520"
+ /db_xref="InterPro:IPR007334"
+ /translation="MEKRLAPVFVENRVIRMTRYAIRFMPPVAVFTLCWQIALGGQLG
+ PAVATALFALSLPMQGLWWLGKRSVTPLPPSILNWFYEVRGKLQEAGQALAPVEGKPD
+ YQALADTLKRAFKQLDKTFLDDL"
+ misc_feature 562617..562991
+ /locus_tag="SARI_00564"
+ /note="hypothetical protein; Provisional; Region:
+ PRK01816"
+ /db_xref="CDD:179338"
+ gene 563060..563572
+ /locus_tag="SARI_00565"
+ CDS 563060..563572
+ /locus_tag="SARI_00565"
+ /inference="protein motif:BlastProDom:IPR005587"
+ /inference="protein motif:HMMPfam:IPR005587"
+ /inference="protein motif:HMMPIR:IPR005587"
+ /inference="similar to AA sequence:INSD:CAD07567.1"
+ /note="'COG: COG3013 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569633.1"
+ /db_xref="GI:161502521"
+ /db_xref="InterPro:IPR005587"
+ /translation="MIQEFKMEMTNAQRLILSNQYKMMTMLDPANAERYRRLQTIIER
+ GYGLQMRELDREFGELTEETCRTIIDIMEMYHALHVSWTNLKDTQAIDERRVTFLGFD
+ AATEARYLGYVRFMVNVEGRYTHFDAGTHGFNAQTPMWEKYQRMLNVWHACPRQYHLS
+ ANEINQIINA"
+ misc_feature 563078..563569
+ /locus_tag="SARI_00565"
+ /note="hypothetical protein; Validated; Region: PRK05445"
+ /db_xref="CDD:180087"
+ gene 563565..564242
+ /locus_tag="SARI_00566"
+ CDS 563565..564242
+ /locus_tag="SARI_00566"
+ /inference="protein motif:HMMPfam:IPR005834"
+ /inference="protein motif:HMMTigr:IPR006402"
+ /inference="protein motif:HMMTigr:IPR006439"
+ /inference="similar to AA sequence:INSD:AAL21235.1"
+ /note="'KEGG: eci:UTI89_C2575 8.4e-96 yfbT; protein YfbT
+ K01112;
+ COG: COG0637 Predicted phosphatase/phosphohexomutase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative phosphatase"
+ /protein_id="YP_001569634.1"
+ /db_xref="GI:161502522"
+ /db_xref="InterPro:IPR005834"
+ /db_xref="InterPro:IPR006402"
+ /db_xref="InterPro:IPR006439"
+ /translation="MPEGVSVQCKGFLFDLDGTLVDSLPAVERAWCNWADRFNLDHDE
+ VLGFIHGKQAITSLRHFMPGKSEAEIAAEFTRLEQIEATETAGITALPGAMDLLNHLN
+ NVGIPWAIVTSGSMPVARARHQVAGLPAPEVFVTAERVKRGKPEPDAYLLGAQLLGLA
+ PQECAVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLKDVDFVLDSLTQLSVAKQPNGN
+ VVVVRKT"
+ misc_feature 563583..564236
+ /locus_tag="SARI_00566"
+ /note="putative phosphatase; Provisional; Region:
+ PRK11587"
+ /db_xref="CDD:183215"
+ misc_feature 563811..564125
+ /locus_tag="SARI_00566"
+ /note="Haloacid dehalogenase-like hydrolases. The haloacid
+ dehalogenase-like (HAD) superfamily includes L-2-haloacid
+ dehalogenase, epoxide hydrolase, phosphoserine
+ phosphatase, phosphomannomutase, phosphoglycolate
+ phosphatase, P-type ATPase, and many others; Region:
+ HAD_like; cd01427"
+ /db_xref="CDD:119389"
+ misc_feature 563898..563900
+ /locus_tag="SARI_00566"
+ /note="motif II; other site"
+ /db_xref="CDD:119389"
+ gene 564319..566145
+ /locus_tag="SARI_00567"
+ CDS 564319..566145
+ /locus_tag="SARI_00567"
+ /inference="protein motif:HMMPfam:IPR004680"
+ /inference="protein motif:HMMPfam:IPR006037"
+ /inference="protein motif:ScanRegExp:IPR001898"
+ /note="'COG: COG0471 Di- and tricarboxylate transporters;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569635.1"
+ /db_xref="GI:161502523"
+ /db_xref="InterPro:IPR001898"
+ /db_xref="InterPro:IPR004680"
+ /db_xref="InterPro:IPR006037"
+ /translation="MNGELIWVLSLLVIAVVLFATGKVRMDAVALFVIVAFVLSGTLT
+ LPEAFSGFSDPNVILIAALFIIGDGLVRTGVATVVGTWLVKMAGSSEIKMLVLLMITV
+ AGLGAFMSSTGVVAIFIPVVLSVSMHMQTSPSRLMMPLSFAGLISGMMTLVATPPNLV
+ VNSELLREGLHGFSFFSVTPLGLVVLALGIVYMLVMRFMLKGDAPGQQGGKRRTFRDL
+ IREYRLTGRARRLAIRPGSPMVGQRLDDLKLRERYGANVIGVERWRRFRRVIVNVNGV
+ SEFRARDVLLIDMSAVEVDLREFCAEQLLEPMVLRGEYFSDQALDVGMAEISLIPESE
+ LIGKSVREIAFRTRYGLNVVGLKRDGIALEGSLADEPLLMGDIILVVGNWKLISQLGQ
+ KGRDFVVLNMPVEVSEASPAHSQAPHAIFCLVLMVALMLTDEIPNPIAAIIACLLMGK
+ FRCIDAESAYKAIHWPSIILIVGMMPFALALQKTGGVSLVVKGLMDIGGGYGPYMMLG
+ CLFVLCAAIGLFISNTATAVLMAPIALAAAKSMGVSPYPFAMAVAMAASAAFMTPVSS
+ PVNTLVLGPGSYSFSDFVKLGVPFTLIVMAVCIVMIPMLFPF"
+ misc_feature 564343..>564909
+ /locus_tag="SARI_00567"
+ /note="Permease SLC13 (solute carrier 13). The
+ sodium/dicarboxylate cotransporter NaDC-1 has been shown
+ to translocate Krebs cycle intermediates such as
+ succinate, citrate, and alpha-ketoglutarate across plasma
+ membranes rabbit, human, and rat kidney. It is...; Region:
+ SLC13_permease; cd01115"
+ /db_xref="CDD:238535"
+ misc_feature order(564364..564375,564394..564435,564478..564531,
+ 564601..564651,564655..564708,564718..564789,
+ 564853..564897)
+ /locus_tag="SARI_00567"
+ /note="transmembrane helices; other site"
+ /db_xref="CDD:238535"
+ misc_feature 564442..566142
+ /locus_tag="SARI_00567"
+ /note="Di- and tricarboxylate transporters [Inorganic ion
+ transport and metabolism]; Region: CitT; COG0471"
+ /db_xref="CDD:223547"
+ misc_feature 565003..>565179
+ /locus_tag="SARI_00567"
+ /note="TrkA-C domain; Region: TrkA_C; pfam02080"
+ /db_xref="CDD:216867"
+ misc_feature 565288..565488
+ /locus_tag="SARI_00567"
+ /note="TrkA-C domain; Region: TrkA_C; pfam02080"
+ /db_xref="CDD:216867"
+ misc_feature <565564..566136
+ /locus_tag="SARI_00567"
+ /note="Permease SLC13 (solute carrier 13). The
+ sodium/dicarboxylate cotransporter NaDC-1 has been shown
+ to translocate Krebs cycle intermediates such as
+ succinate, citrate, and alpha-ketoglutarate across plasma
+ membranes rabbit, human, and rat kidney. It is...; Region:
+ SLC13_permease; cd01115"
+ /db_xref="CDD:238535"
+ gene complement(566234..566833)
+ /locus_tag="SARI_00568"
+ CDS complement(566234..566833)
+ /locus_tag="SARI_00568"
+ /inference="protein motif:HMMPfam:IPR006674"
+ /inference="protein motif:HMMSmart:IPR003607"
+ /inference="similar to AA sequence:INSD:AAV76534.1"
+ /note="'KEGG: stm:STM2332 3.4e-99 putative hydrolase of HD
+ superfamily K08722;
+ COG: COG1896 Predicted hydrolases of HD superfamily;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569636.1"
+ /db_xref="GI:161502524"
+ /db_xref="InterPro:IPR003607"
+ /db_xref="InterPro:IPR006674"
+ /translation="MKQSHFFAHLSRLKLINRWPLMRNVRTENVSEHSLQVAMVAHAL
+ AAIKNRKFGGQLNAEHIALLAMYHDTSEVLTGDLPTPVKYFNSQIAQEYKAIEKIAQQ
+ KLVDMAPDELRDIFAPLIDENAWSEEEQAIVKQADALCAYLKCLEELSAGNNEFKLAK
+ TRLEKTLALRRSQEMDYFMAVFVPSFHLSLDEISQDSPL"
+ misc_feature complement(566246..566830)
+ /locus_tag="SARI_00568"
+ /note="5'-nucleotidase; Provisional; Region:
+ PRK03826"
+ /db_xref="CDD:235165"
+ gene complement(566927..568141)
+ /locus_tag="SARI_00569"
+ CDS complement(566927..568141)
+ /locus_tag="SARI_00569"
+ /inference="protein motif:HMMPfam:IPR004839"
+ /inference="similar to AA sequence:INSD:AAL21232.1"
+ /note="'broad specificity; family IV; in Corynebacterium
+ glutamicum this protein can use glutamate,
+ 2-aminobutyrate, and aspartate as amino donors and
+ pyruvate as the acceptor'"
+ /codon_start=1
+ /transl_table=11
+ /product="aminotransferase AlaT"
+ /protein_id="YP_001569637.1"
+ /db_xref="GI:161502525"
+ /db_xref="InterPro:IPR004839"
+ /translation="MSPIEKSSKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPA
+ PFGFEAPDEILVDVIRNLPTAQGYCDSKGLYSARKAIMQHYQARGMRDVTVEDIYIGN
+ GVSELIVQAMQALLNSGDEMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDD
+ IRAKITPRTRGIVIINPNNPTGAVYSKELLMEIVNIAREHNLIIFADEIYDKILYEDA
+ EHHSIAALAPDLLTITFNGLSKTYRVAGFRQGWMVLNGPKKHAKGYIEGLDMLASMRL
+ CANVPAQHAIQTALGGYQSISEFILPGGRLYEQRNRAWELINDIPGVSCVKPRGALYM
+ FPKIDAKRFNIHDDQKMVLDFLLQEKVLLVQGTAFNWPWPDHFRIVTLPREDDLEMAI
+ NRFGRFLSGYHQ"
+ misc_feature complement(566930..568141)
+ /locus_tag="SARI_00569"
+ /note="aminotransferase AlaT; Validated; Region: PRK09265"
+ /db_xref="CDD:181738"
+ misc_feature complement(566951..568036)
+ /locus_tag="SARI_00569"
+ /note="Aspartate aminotransferase family. This family
+ belongs to pyridoxal phosphate (PLP)-dependent aspartate
+ aminotransferase superfamily (fold I). Pyridoxal phosphate
+ combines with an alpha-amino acid to form a compound
+ called a Schiff base or aldimine...; Region: AAT_like;
+ cd00609"
+ /db_xref="CDD:99734"
+ misc_feature complement(order(567398..567400,567422..567427,
+ 567431..567433,567512..567514,567605..567607,
+ 567755..567757,567827..567835))
+ /locus_tag="SARI_00569"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:99734"
+ misc_feature complement(order(567287..567289,567296..567298,
+ 567398..567406,567533..567535,567725..567727,
+ 567824..567826))
+ /locus_tag="SARI_00569"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99734"
+ misc_feature complement(567422..567424)
+ /locus_tag="SARI_00569"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:99734"
+ gene 569068..570006
+ /locus_tag="SARI_00570"
+ CDS 569068..570006
+ /locus_tag="SARI_00570"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="protein motif:HMMPfam:IPR005119"
+ /inference="similar to AA sequence:REFSEQ:NP_461272.1"
+ /note="'KEGG: shn:Shewana3_3435 5.5e-05 transcriptional
+ regulator, LysR family K06022;
+ COG: COG0583 Transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569638.1"
+ /db_xref="GI:161502526"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR005119"
+ /translation="MINANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQ
+ QMQRLEQLVGKELFARHGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLT
+ IGASDESADTILPFLLSRISSVYPKLALDVRVKRNAYMVDMVKLQEVDLVVTTNQPHS
+ LDCLNLRTSPTHWYCAAEYVLQRGEPVPLVLLDDPSPFRDMVLDTLNAAGIPWRLAYV
+ ASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLGAADGLPPLPDTEYLLCRDPDSQNEL
+ AMVIFHAMESYQNPWHYNQFSAEDGDDSLMVEGGFE"
+ misc_feature 569068..569994
+ /locus_tag="SARI_00570"
+ /note="DNA-binding transcriptional repressor LrhA;
+ Provisional; Region: PRK15092"
+ /db_xref="CDD:237907"
+ misc_feature 569104..569280
+ /locus_tag="SARI_00570"
+ /note="Bacterial regulatory helix-turn-helix protein, lysR
+ family; Region: HTH_1; pfam00126"
+ /db_xref="CDD:215735"
+ misc_feature 569365..569919
+ /locus_tag="SARI_00570"
+ /note="The C-terminal substrate domain of LysR-like
+ regulator LrhA (LysR homologue A) and that of closely
+ related homologs, contains the type 2 periplasmic binding
+ fold; Region: PBP2_LrhA_like; cd08439"
+ /db_xref="CDD:176130"
+ misc_feature order(569410..569415,569419..569424,569431..569433,
+ 569443..569445,569449..569469,569713..569730,
+ 569746..569751,569755..569760)
+ /locus_tag="SARI_00570"
+ /note="putative dimerization interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:176130"
+ unsure 569962..570320
+ /note="Sequence derived from one plasmid subclone"
+ gene 570631..571074
+ /locus_tag="SARI_00571"
+ CDS 570631..571074
+ /locus_tag="SARI_00571"
+ /inference="protein motif:HMMPanther:IPR000440"
+ /inference="protein motif:HMMPfam:IPR000440"
+ /inference="similar to AA sequence:INSD:AAV76538.1"
+ /note="Catalyzes the transfer of electrons from NADH to
+ quinone"
+ /codon_start=1
+ /transl_table=11
+ /product="NADH dehydrogenase subunit A"
+ /protein_id="YP_001569639.1"
+ /db_xref="GI:161502527"
+ /db_xref="InterPro:IPR000440"
+ /translation="MSMSTSTEVIAHHWAFAIFLIVAIGLCCLMLVGGWFLGGRARAR
+ HKNVPFESGIDSVGTARLRLSAKFYLVAMFFVIFDVEALYLFAWSTSIRESGWVGFVE
+ AAIFIFVLLAGLVYLARIGALDWTPARSRRERMNPETNSIANRQR"
+ misc_feature 570646..571008
+ /locus_tag="SARI_00571"
+ /note="NADH:ubiquinone oxidoreductase subunit A;
+ Validated; Region: PRK06602"
+ /db_xref="CDD:180638"
+ gene 571090..571752
+ /locus_tag="SARI_00572"
+ CDS 571090..571752
+ /locus_tag="SARI_00572"
+ /inference="protein motif:HMMPfam:IPR006137"
+ /inference="protein motif:HMMTigr:IPR006138"
+ /inference="protein motif:ScanRegExp:IPR006138"
+ /inference="similar to AA sequence:INSD:AAV76539.1"
+ /note="The point of entry for the majority of electrons
+ that traverse the respiratory chain eventually resulting
+ in the reduction of oxygen"
+ /codon_start=1
+ /transl_table=11
+ /product="NADH dehydrogenase subunit B"
+ /protein_id="YP_001569640.1"
+ /db_xref="GI:161502528"
+ /db_xref="InterPro:IPR006137"
+ /db_xref="InterPro:IPR006138"
+ /translation="MDYTLTRIDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLHD
+ MVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTC
+ FTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPP
+ RPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQPERERKRGERIAVTNLRTPD
+ EI"
+ misc_feature 571138..571719
+ /locus_tag="SARI_00572"
+ /note="NADH:ubiquinone oxidoreductase 20 kD subunit and
+ related Fe-S oxidoreductases [Energy production and
+ conversion]; Region: NuoB; COG0377"
+ /db_xref="CDD:223454"
+ gene 571843..573645
+ /locus_tag="SARI_00573"
+ CDS 571843..573645
+ /locus_tag="SARI_00573"
+ /inference="protein motif:BlastProDom:IPR001268"
+ /inference="protein motif:HMMPfam:IPR001135"
+ /inference="protein motif:HMMPfam:IPR001268"
+ /inference="protein motif:HMMTigr:IPR010218"
+ /inference="protein motif:HMMTigr:IPR010219"
+ /inference="protein motif:ScanRegExp:IPR001135"
+ /inference="protein motif:superfamily:IPR008992"
+ /note="'NuoCD; NDH-1 shuttles electrons from NADH, via FMN
+ and iron-sulfur (Fe-S) centers, to quinones in the
+ respiratory chain; subunits NuoCD, E, F, and G constitute
+ the peripheral sector of the complex; in Escherichia coli
+ this gene encodes a fusion protein of NuoC and NuoD that
+ are found separate in other organisms'"
+ /codon_start=1
+ /transl_table=11
+ /product="bifunctional NADH:ubiquinone oxidoreductase
+ subunit C/D"
+ /protein_id="YP_001569641.1"
+ /db_xref="GI:161502529"
+ /db_xref="InterPro:IPR001135"
+ /db_xref="InterPro:IPR001268"
+ /db_xref="InterPro:IPR008992"
+ /db_xref="InterPro:IPR010218"
+ /db_xref="InterPro:IPR010219"
+ /translation="MVNNMTDLTAQDAAWSTRDHLDDPVIGELRNRFGPDAFTVQATR
+ TGVPVVWVKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHRDGLPAADFSVFYHL
+ ISIERNRDIMLKVALSENDLRVPTFTKLFPNANWYERETWEMFGIDIEGHPHLTRIMM
+ PQTWEGHPLRKDYPARATEFDPFELTKAKQDLEMEALTFKPEDWGMKRGTDNEDFMFL
+ NLGPNHPSAHGAFRIILQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIE
+ YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMT
+ PVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWERLLREFLEWMPKRLD
+ SYEKAALRNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKWRPYSGYENF
+ DFEVPVGGGVSDCYTRVMLKVEELRQSLRILQQCLDNMPEGPFKADHPLTTPPPKERT
+ LQHIETLITHFLQVSWGPVMPAQESFQMVEATKGINSYYLTSDGSTMSYRTRVRTPSF
+ AHLQQIPSAIRGSLVSDLIVYLGSIDFVMSDVDR"
+ misc_feature 571915..573642
+ /locus_tag="SARI_00573"
+ /note="bifunctional NADH:ubiquinone oxidoreductase subunit
+ C/D; Provisional; Region: PRK11742"
+ /db_xref="CDD:236965"
+ misc_feature 571984..572373
+ /locus_tag="SARI_00573"
+ /note="NADH (or F420H2) dehydrogenase, subunit C; Region:
+ NuoC_fam; TIGR01961"
+ /db_xref="CDD:233657"
+ misc_feature 572494..573642
+ /locus_tag="SARI_00573"
+ /note="NADH dehydrogenase subunit D; Validated; Region:
+ PRK06075"
+ /db_xref="CDD:180385"
+ gene 573648..574148
+ /locus_tag="SARI_00574"
+ CDS 573648..574148
+ /locus_tag="SARI_00574"
+ /inference="protein motif:BlastProDom:IPR002023"
+ /inference="protein motif:Gene3D:IPR012335"
+ /inference="protein motif:HMMPanther:IPR002023"
+ /inference="protein motif:HMMPfam:IPR002023"
+ /inference="protein motif:HMMTigr:IPR002023"
+ /inference="protein motif:ScanRegExp:IPR002023"
+ /inference="protein motif:superfamily:IPR012336"
+ /inference="similar to AA sequence:INSD:AAL21226.1"
+ /note="Catalyzes the transfer of electrons from NADH to
+ quinone"
+ /codon_start=1
+ /transl_table=11
+ /product="NADH dehydrogenase subunit E"
+ /protein_id="YP_001569642.1"
+ /db_xref="GI:161502530"
+ /db_xref="InterPro:IPR002023"
+ /db_xref="InterPro:IPR012335"
+ /db_xref="InterPro:IPR012336"
+ /translation="MHENQQPQTEAFELSAAEREAIEHEKHHYEDPRAASIEALKIVQ
+ KQRGWVPDGAIYAIADVLGIPASDVEGVATFYSQIFRQPVGRHVIRYCDSVVCHITGY
+ QGIQAALEKNLNIKPGQTTFDGRFTLLPTCCLGNCDKGPNMMIDEDTHSHLTPEAIPE
+ LLERYK"
+ misc_feature 573687..574145
+ /locus_tag="SARI_00574"
+ /note="NADH dehydrogenase subunit E; Validated; Region:
+ PRK07539"
+ /db_xref="CDD:181024"
+ misc_feature 573903..574142
+ /locus_tag="SARI_00574"
+ /note="TRX-like [2Fe-2S] Ferredoxin (Fd) family,
+ NADH:ubiquinone oxidoreductase (Nuo) subunit E subfamily;
+ Nuo, also called respiratory chain Complex 1, is the entry
+ point for electrons into the respiratory chains of
+ bacteria and the mitochondria of eukaryotes; Region:
+ TRX_Fd_NuoE; cd03064"
+ /db_xref="CDD:239362"
+ misc_feature order(573909..573911,573915..573917,574035..574043)
+ /locus_tag="SARI_00574"
+ /note="putative dimer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:239362"
+ misc_feature order(573921..573923,573936..573938,574044..574046,
+ 574056..574058)
+ /locus_tag="SARI_00574"
+ /note="[2Fe-2S] cluster binding site [ion binding]; other
+ site"
+ /db_xref="CDD:239362"
+ gene 574145..575482
+ /locus_tag="SARI_00575"
+ CDS 574145..575482
+ /locus_tag="SARI_00575"
+ /inference="protein motif:HMMPfam:IPR011538"
+ /inference="protein motif:HMMTigr:IPR011537"
+ /inference="protein motif:ScanRegExp:IPR001949"
+ /inference="similar to AA sequence:INSD:AAV76542.1"
+ /note="'shuttles electrons from NADH, via FMN and
+ iron-sulfur (Fe-S) centers, to quinones in the respiratory
+ chain; NuoF is part of the soluble NADH dehydrogenase
+ fragment, which represents the electron input part of NADH
+ dehydrogenase'"
+ /codon_start=1
+ /transl_table=11
+ /product="NADH dehydrogenase I subunit F"
+ /protein_id="YP_001569643.1"
+ /db_xref="GI:161502531"
+ /db_xref="InterPro:IPR001949"
+ /db_xref="InterPro:IPR011537"
+ /db_xref="InterPro:IPR011538"
+ /translation="MKNVIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTG
+ LSPDEIVSQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDR
+ LLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVHLRRAIAEATEAGLLGKNI
+ MGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGVWGKPTCVNN
+ VETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILED
+ YAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEIG
+ MVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLG
+ PGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLINGIQPNLLKERW"
+ misc_feature 574145..575479
+ /locus_tag="SARI_00575"
+ /note="NADH dehydrogenase I subunit F; Provisional;
+ Region: PRK11278"
+ /db_xref="CDD:236891"
+ misc_feature 574901..575044
+ /locus_tag="SARI_00575"
+ /note="SLBB domain; Region: SLBB; pfam10531"
+ /db_xref="CDD:220798"
+ misc_feature 575150..575287
+ /locus_tag="SARI_00575"
+ /note="NADH-ubiquinone oxidoreductase-F iron-sulfur
+ binding region; Region: NADH_4Fe-4S; pfam10589"
+ /db_xref="CDD:204521"
+ gene 575507..578239
+ /locus_tag="SARI_00576"
+ CDS 575507..578239
+ /locus_tag="SARI_00576"
+ /inference="protein motif:Gene3D:IPR012675"
+ /inference="protein motif:HMMPfam:IPR001041"
+ /inference="protein motif:HMMPfam:IPR006656"
+ /inference="protein motif:HMMPfam:IPR006657"
+ /inference="protein motif:HMMPfam:IPR006963"
+ /inference="protein motif:HMMTigr:IPR010228"
+ /inference="protein motif:ScanRegExp:IPR000283"
+ /inference="protein motif:superfamily:IPR001041"
+ /inference="protein motif:superfamily:IPR009010"
+ /note="Catalyzes the transfer of electrons from NADH to
+ quinone"
+ /codon_start=1
+ /transl_table=11
+ /product="NADH dehydrogenase subunit G"
+ /protein_id="YP_001569644.1"
+ /db_xref="GI:161502532"
+ /db_xref="InterPro:IPR000283"
+ /db_xref="InterPro:IPR001041"
+ /db_xref="InterPro:IPR006656"
+ /db_xref="InterPro:IPR006657"
+ /db_xref="InterPro:IPR006963"
+ /db_xref="InterPro:IPR009010"
+ /db_xref="InterPro:IPR010228"
+ /db_xref="InterPro:IPR012675"
+ /translation="MLMATIHVDGKEYEVNGADNLLQACLSLGLDIPYFCWHPALGSV
+ GACRQCAVKQYQNAEDTRGRLVMSCMTPATDGTFISIDDEEAKQFRESVVEWLMTNHP
+ HDCPVCEEGGNCHLQDMTVMTGHSFRRYRFTKRTHRNQDLGPFISHEMNRCIACYRCV
+ RYYKDYADGTDLGVYGAHDNVYFGRPEDGVLESEFSGNLVEICPTGVFTDKTHSERYN
+ RKWDMQFAPSICQQCSIGCNISPGERYGELRRIENRYNGTVNHYFLCDRGRFGYGYVN
+ LKDRPRQPVQRRGDDFITLNAEQAMQGAADILRQSKKVIGIGSPRASIESNFALRELV
+ GAENFYTGIAQGEQERLQLALKVLREGGIYTPALREIESYDAVLVLGEDVTQTGARVA
+ LAVRQAVKGKAREMAAAQKVADWQIAAILNIGQRAKHPLFVSNVDSTRLDDIAAWTYR
+ APVEDQARLGFAIAHALDNTAPAVDGISGDLQNKIDVIVQALLGAKKPLIISGTNAGS
+ SEVIQAAANVAKALKSRGADVGITMIARSVNSMGLGMMGGGSLDDALSELETGRADAV
+ VVLENDLHRHASATRVNAALAKAPLVMVVDHQRTAIMENAHLVLSAASFAESDGTVIN
+ NEGRAQRFFQVYDPAYYDNKTIMLESWRWLHSLHSTVENREVDWTQLDHVIDAVIAAM
+ PQFAGIKDAAPDASFRIRGQKLAREPHRYSGRTAMRANISVHEPRQPQDKDTMFAFSM
+ EGNNQPTAPRSEIPFAWAPGWNSPQAWNKFQDEVGGKLRHGDPGVRLIEATEGGLDYF
+ TTVPASFQAQDGHWRVAPYYHLFGSDELSQRSPVFQSRMPQPYIKLNPVDAAKLGVNA
+ GTRVSFSYDGNTVTLPVEISEGLAAGQVGLPMGMPGIAPVLAGARLEDLREAQQ"
+ misc_feature 575513..577861
+ /locus_tag="SARI_00576"
+ /note="NADH dehydrogenase/NADH:ubiquinone oxidoreductase
+ 75 kD subunit (chain G) [Energy production and
+ conversion]; Region: NuoG; COG1034"
+ /db_xref="CDD:223965"
+ misc_feature 575519..575743
+ /locus_tag="SARI_00576"
+ /note="2Fe-2S iron-sulfur cluster binding domain.
+ Iron-sulfur proteins play an important role in electron
+ transfer processes and in various enzymatic reactions. The
+ family includes plant and algal ferredoxins, which act as
+ electron carriers in photosynthesis...; Region: fer2;
+ cd00207"
+ /db_xref="CDD:238126"
+ misc_feature order(575600..575605,575612..575614,575639..575641,
+ 575645..575656,575708..575713)
+ /locus_tag="SARI_00576"
+ /note="catalytic loop [active]"
+ /db_xref="CDD:238126"
+ misc_feature order(575612..575614,575645..575647,575654..575656,
+ 575711..575713)
+ /locus_tag="SARI_00576"
+ /note="iron binding site [ion binding]; other site"
+ /db_xref="CDD:238126"
+ misc_feature 575774..575896
+ /locus_tag="SARI_00576"
+ /note="NADH-ubiquinone oxidoreductase-G iron-sulfur
+ binding region; Region: NADH-G_4Fe-4S_3; pfam10588"
+ /db_xref="CDD:204520"
+ misc_feature 576185..577555
+ /locus_tag="SARI_00576"
+ /note="MopB_NDH-1_NuoG2-N7: The second domain of the NuoG
+ subunit (with a [4Fe-4S] cluster, N7) of the NADH-quinone
+ oxidoreductase/NADH dehydrogenase-1 (NDH-1) found in
+ various bacteria. The NDH-1 is the first
+ energy-transducting complex in the respiratory...; Region:
+ MopB_NDH-1_NuoG2-N7; cd02771"
+ /db_xref="CDD:239172"
+ misc_feature order(576194..576196,576203..576205,576215..576217,
+ 576299..576301)
+ /locus_tag="SARI_00576"
+ /note="[4Fe-4S] binding site [ion binding]; other site"
+ /db_xref="CDD:239172"
+ misc_feature 577940..578191
+ /locus_tag="SARI_00576"
+ /note="MopB_CT_NDH-1_NuoG2-N7: C-terminal region of the
+ NuoG-like subunit (of the variant with a [4Fe-4S] cluster,
+ N7) of the NADH-quinone oxidoreductase/NADH
+ dehydrogenase-1 (NDH-1) found in various bacteria. The
+ NDH-1 is the first energy-transducting complex...; Region:
+ MopB_CT_NDH-1_NuoG2-N7; cd02788"
+ /db_xref="CDD:239189"
+ gene 578236..579213
+ /locus_tag="SARI_00577"
+ CDS 578236..579213
+ /locus_tag="SARI_00577"
+ /inference="protein motif:HMMPanther:IPR001694"
+ /inference="protein motif:HMMPfam:IPR001694"
+ /inference="protein motif:ScanRegExp:IPR001694"
+ /inference="similar to AA sequence:SwissProt:Q60010"
+ /note="Catalyzes the transfer of electrons from NADH to
+ quinone"
+ /codon_start=1
+ /transl_table=11
+ /product="NADH dehydrogenase subunit H"
+ /protein_id="YP_001569645.1"
+ /db_xref="GI:161502533"
+ /db_xref="InterPro:IPR001694"
+ /translation="MSWITPDLIEILLSILKAVVILLVVVTCGAFMSFGERRLLGLFQ
+ NRYGPNRVGWGGSLQLVADMIKMFFKEDWVPKFSDRVIFTLAPMIAFTSLLLSFAIVP
+ VSPNWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTVSYEVFL
+ GLSLMGVVAQAGSFNMTDIVNNQAHLWNVIPQFFGFVTFAIAGVAVCHRHPFDQPEAE
+ QELADGYHIEYSGMKFGLFFVGEYIGIVTVSALMVTLFFGGWHGPFLPPFVWFALKTA
+ FFMMMFILIRASLPRPRYDQVMSFGWKVCLPLTLINLLVTAAVILWQAQ"
+ misc_feature 578317..579192
+ /locus_tag="SARI_00577"
+ /note="NADH:ubiquinone oxidoreductase subunit H;
+ Provisional; Region: PRK06076"
+ /db_xref="CDD:235692"
+ gene 579198..579770
+ /locus_tag="SARI_00578"
+ CDS 579198..579770
+ /locus_tag="SARI_00578"
+ /inference="protein motif:HMMPfam:IPR001450"
+ /inference="protein motif:HMMTigr:IPR010226"
+ /inference="protein motif:ScanRegExp:IPR001450"
+ /inference="protein motif:superfamily:IPR009051"
+ /inference="similar to AA sequence:INSD:AAV76545.1"
+ /note="Catalyzes the transfer of electrons from NADH to
+ quinone"
+ /codon_start=1
+ /transl_table=11
+ /product="NADH dehydrogenase subunit I"
+ /protein_id="YP_001569646.1"
+ /db_xref="GI:161502534"
+ /db_xref="InterPro:IPR001450"
+ /db_xref="InterPro:IPR009051"
+ /db_xref="InterPro:IPR010226"
+ /translation="MAGAIRDTKTMTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYP
+ EEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFF
+ RINFSRCIFCGLCEEACPTTAIQLTPDFELGEYKRQDLVYEKEDLLISGPGKYPEYNF
+ YRMAGMAIDGKDKGEAENEAKPIDVKSLLP"
+ misc_feature 579222..579680
+ /locus_tag="SARI_00578"
+ /note="NADH dehydrogenase subunit I; Provisional; Region:
+ PRK05888"
+ /db_xref="CDD:235637"
+ misc_feature 579396..579455
+ /locus_tag="SARI_00578"
+ /note="4Fe-4S binding domain; Region: Fer4; pfam00037"
+ /db_xref="CDD:215671"
+ misc_feature 579507..579572
+ /locus_tag="SARI_00578"
+ /note="4Fe-4S binding domain; Region: Fer4; pfam00037"
+ /db_xref="CDD:215671"
+ gene 579781..580335
+ /locus_tag="SARI_00579"
+ CDS 579781..580335
+ /locus_tag="SARI_00579"
+ /inference="protein motif:HMMPfam:IPR001457"
+ /inference="similar to AA sequence:INSD:AAV76546.1"
+ /note="Catalyzes the transfer of electrons from NADH to
+ quinone"
+ /codon_start=1
+ /transl_table=11
+ /product="NADH dehydrogenase subunit J"
+ /protein_id="YP_001569647.1"
+ /db_xref="GI:161502535"
+ /db_xref="InterPro:IPR001457"
+ /translation="MEFAFYICGLIAILATLRVITHTNPVHALLYLVISLLAISGVFF
+ SLGAYFAGALEIIVYAGAIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAVLSAI
+ MLAVIVYAILGVNDQGIDGTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGR
+ EERAGEVLSNRADDRAKRKTEERA"
+ misc_feature 579781..580329
+ /locus_tag="SARI_00579"
+ /note="NADH:ubiquinone oxidoreductase subunit J;
+ Provisional; Region: PRK06638"
+ /db_xref="CDD:235844"
+ misc_feature 579790..>579969
+ /locus_tag="SARI_00579"
+ /note="NADH dehydrogenase subunit J; Provisional; Region:
+ PRK06433"
+ /db_xref="CDD:180562"
+ gene 580332..580634
+ /locus_tag="SARI_00580"
+ CDS 580332..580634
+ /locus_tag="SARI_00580"
+ /inference="protein motif:BlastProDom:IPR003214"
+ /inference="protein motif:HMMPfam:IPR001133"
+ /inference="similar to AA sequence:INSD:ABJ01667.1"
+ /note="Catalyzes the transfer of electrons from NADH to
+ quinone"
+ /codon_start=1
+ /transl_table=11
+ /product="NADH dehydrogenase subunit K"
+ /protein_id="YP_001569648.1"
+ /db_xref="GI:161502536"
+ /db_xref="InterPro:IPR001133"
+ /db_xref="InterPro:IPR003214"
+ /translation="MIPLQHGLILAAILFVLGLTGLVIRRNLLFMLIGLEIMINASAL
+ AFVVAGSYWGQTDGQVMYILAISLAAAEASIGLALLLQLHRRRQNLNIDSVSEMRG"
+ misc_feature 580332..>580517
+ /locus_tag="SARI_00580"
+ /note="NADH:ubiquinone oxidoreductase subunit K;
+ Validated; Region: PRK05715"
+ /db_xref="CDD:180218"
+ gene 580631..582472
+ /locus_tag="SARI_00581"
+ CDS 580631..582472
+ /locus_tag="SARI_00581"
+ /inference="protein motif:FPrintScan:IPR003916"
+ /inference="protein motif:FPrintScan:IPR003945"
+ /inference="protein motif:HMMPfam:IPR001516"
+ /inference="protein motif:HMMPfam:IPR001750"
+ /inference="protein motif:HMMTigr:IPR003945"
+ /note="Catalyzes the transfer of electrons from NADH to
+ ubiquinone"
+ /codon_start=1
+ /transl_table=11
+ /product="NADH dehydrogenase subunit L"
+ /protein_id="YP_001569649.1"
+ /db_xref="GI:161502537"
+ /db_xref="InterPro:IPR001516"
+ /db_xref="InterPro:IPR001750"
+ /db_xref="InterPro:IPR003916"
+ /db_xref="InterPro:IPR003945"
+ /translation="MNMLALTIILPLIGFVLLAFSRGRWSENLSATIGVGSVGLAALV
+ TAFVGMDFFANGKQAFSQPLWTWMSVGNFNIGFNLVLDGLSLTMLSVVTGVGFLIHMF
+ ASWYMRGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWEGVGLCSYLLIGFYYSD
+ PKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFADGNNMLMWA
+ TLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMT
+ PQILHLVGIIGAITLVMAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFH
+ LMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYACFLVGGAALSALPLV
+ TAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAGKG
+ ITHHLPLIVLMILSTFIGALIVPPLQGVLPQTTELAHGRVLTLEITSGVVAIAGILIA
+ AWLWLGKRTLVTSIANSAPGRLLGTWWYNAWGFDWLYDKVFVKPFLGIAWLLKRDPLN
+ ALMNIPAILSRFAGKGLVLSENGYLRWYVASMSIGAVVVLALLMVLR"
+ misc_feature 580631..582433
+ /locus_tag="SARI_00581"
+ /note="NADH:ubiquinone oxidoreductase subunit L; Reviewed;
+ Region: PRK06590"
+ /db_xref="CDD:235836"
+ misc_feature 580811..580996
+ /locus_tag="SARI_00581"
+ /note="NADH-Ubiquinone oxidoreductase (complex I), chain 5
+ N-terminus; Region: Oxidored_q1_N; pfam00662"
+ /db_xref="CDD:109709"
+ misc_feature 581027..581848
+ /locus_tag="SARI_00581"
+ /note="NADH-Ubiquinone/plastoquinone (complex I), various
+ chains; Region: Oxidored_q1; pfam00361"
+ /db_xref="CDD:201180"
+ gene 582703..584232
+ /locus_tag="SARI_00582"
+ CDS 582703..584232
+ /locus_tag="SARI_00582"
+ /inference="protein motif:HMMPfam:IPR001750"
+ /inference="protein motif:HMMTigr:IPR010227"
+ /inference="protein motif:superfamily:IPR008948"
+ /inference="similar to AA sequence:INSD:AAL21218.1"
+ /note="Catalyzes the transfer of electrons from NADH to
+ quinone"
+ /codon_start=1
+ /transl_table=11
+ /product="NADH dehydrogenase subunit M"
+ /protein_id="YP_001569650.1"
+ /db_xref="GI:161502538"
+ /db_xref="InterPro:IPR001750"
+ /db_xref="InterPro:IPR008948"
+ /db_xref="InterPro:IPR010227"
+ /translation="MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALGL
+ QLWLQGGYSLTQSAGIPQWQSEFVLPWIPRFGISIHLALDGLSLLMVVLTGLLGVLAV
+ LCSWREIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHK
+ ASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSHG
+ VEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSL
+ PLFPNASAEFAPIAMWLGVIGIFYGAWMAFTQYDIKRLIAYTSVSHMGFVLIAIYTGS
+ QLAYQGAVIQMIAHGLSAAGLFILCGQLYERLHTRDMRMMGGLWGKMKWLPALSMFFA
+ VATLGMPGTGNFVGEFMILFGSYQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKS
+ QIANQELPGMSLRELFIILLLVVLLVLLGFYPQPILDTSHSAMSNIQQWFVNSVTTTR
+ P"
+ misc_feature 582703..584229
+ /locus_tag="SARI_00582"
+ /note="NADH:ubiquinone oxidoreductase subunit M; Reviewed;
+ Region: PRK05846"
+ /db_xref="CDD:235622"
+ misc_feature 583129..583944
+ /locus_tag="SARI_00582"
+ /note="NADH-Ubiquinone/plastoquinone (complex I), various
+ chains; Region: Oxidored_q1; pfam00361"
+ /db_xref="CDD:201180"
+ gene 584239..585696
+ /locus_tag="SARI_00583"
+ CDS 584239..585696
+ /locus_tag="SARI_00583"
+ /inference="protein motif:HMMPfam:IPR001750"
+ /inference="protein motif:HMMTigr:IPR010096"
+ /inference="similar to AA sequence:SwissProt:Q8Z530"
+ /note="Catalyzes the transfer of electrons from NADH to
+ quinone"
+ /codon_start=1
+ /transl_table=11
+ /product="NADH dehydrogenase subunit N"
+ /protein_id="YP_001569651.1"
+ /db_xref="GI:161502539"
+ /db_xref="InterPro:IPR001750"
+ /db_xref="InterPro:IPR010096"
+ /translation="MTITPQHLIALLPLLIVGLTVVVVMLSIAWRRNHFLNATLSVIG
+ LNAALVSLWFVGQAGAMDVTPLMRVDGFAMLYTGLVLLASLATCTFAYPWLEGYNDNQ
+ EEFYLLVLIASLGGILLANANHLAALFLGIELISLPLFGLIGYAFRQKRSLEASIKYT
+ ILSAAASSFLLFGMALVYAQSGNLSFEALGKSLGDGMLREPLLLAGFGLMIVGLGFKL
+ SLVPFHLWTPDVYQGAPAPVSTFLATASKIAIFGVVMRLFLYAPVGDSEAVRVVLGII
+ AFASIIFGNLMALSQTNIKRLLGYSSISHLGYLLVALIALQSGEMSMEAVGVYLAGYL
+ FSSLGAFGVVSLMSSPFRGPDADSLFSYRGLFWHRPVLAAVMTVMMLSLAGIPMTLGF
+ IGKFYVLAVGVQASLWWLVAAVVVGSAIGLYYYLRVAVSLYLHAPQQPGRDAPINWQY
+ SAGGIVVLISALLVLVLGVWPQPLISLVQLATPLM"
+ misc_feature 584323..585687
+ /locus_tag="SARI_00583"
+ /note="NADH:ubiquinone oxidoreductase subunit N;
+ Provisional; Region: PRK05777"
+ /db_xref="CDD:235603"
+ misc_feature 584632..585438
+ /locus_tag="SARI_00583"
+ /note="NADH-Ubiquinone/plastoquinone (complex I), various
+ chains; Region: Oxidored_q1; pfam00361"
+ /db_xref="CDD:201180"
+ gene complement(585836..586840)
+ /locus_tag="SARI_00584"
+ CDS complement(585836..586840)
+ /locus_tag="SARI_00584"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:HMMPfam:IPR001789"
+ /inference="protein motif:HMMPfam:IPR002545"
+ /inference="protein motif:HMMSmart:IPR001789"
+ /inference="protein motif:HMMSmart:IPR002545"
+ /inference="protein motif:superfamily:IPR002545"
+ /inference="protein motif:superfamily:IPR011006"
+ /inference="similar to AA sequence:REFSEQ:YP_149863.1"
+ /note="'KEGG: stm:STM2314 3.8e-164 putative chemotaxis
+ signal transduction protein K03415;
+ COG: COG0784 FOG: CheY-like receiver;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569652.1"
+ /db_xref="GI:161502540"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR002545"
+ /db_xref="InterPro:IPR011006"
+ /translation="MDNFQKDIDDRANLTLSNRFELLLFRLGTSLHEQKSELFGINVF
+ KLREIVPMPAFTRPAGMKAPLLGMVNIRDQVIPVIDLPAVAGCKPETGLNILLITEYA
+ RSVQAFAVESVENIMRLDWKQVHTAEKAVNGRYITSIACLDEDKETNNLALVLDVEQI
+ LYDIVPSSHDLRATNLKTNKFNITPGAVAIVAEDSKVARAMLEKGLNAMEIPHQMHVT
+ GKDAWVKIQQLAQEAEAEGKPISEKIALVLTDLEMPEMDGFTLTRKIKTDERLKKIPV
+ VIHSSLSGSANEDHVRKVKADGYVAKFEINELSSVIQEVMERAAQNISGPLVSRQLLS
+ "
+ misc_feature complement(586331..586828)
+ /locus_tag="SARI_00584"
+ /note="Chemotaxis signal transduction protein [Cell
+ motility and secretion / Signal transduction mechanisms];
+ Region: CheW; COG0835"
+ /db_xref="CDD:223905"
+ misc_feature complement(585875..586288)
+ /locus_tag="SARI_00584"
+ /note="FOG: CheY-like receiver [Signal transduction
+ mechanisms]; Region: CheY; COG0784"
+ /db_xref="CDD:223855"
+ misc_feature complement(585893..586273)
+ /locus_tag="SARI_00584"
+ /note="Signal receiver domain; originally thought to be
+ unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
+ recently identified in eukaroytes ETR1 Arabidopsis
+ thaliana; this domain receives the signal from the sensor
+ partner in a two-component systems; Region: REC; cd00156"
+ /db_xref="CDD:238088"
+ misc_feature complement(order(585935..585937,585944..585946,
+ 585992..585994,586067..586069,586091..586093,
+ 586259..586264))
+ /locus_tag="SARI_00584"
+ /note="active site"
+ /db_xref="CDD:238088"
+ misc_feature complement(586091..586093)
+ /locus_tag="SARI_00584"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238088"
+ misc_feature complement(order(586067..586075,586079..586084))
+ /locus_tag="SARI_00584"
+ /note="intermolecular recognition site; other site"
+ /db_xref="CDD:238088"
+ misc_feature complement(order(585932..585934,585935..585937))
+ /locus_tag="SARI_00584"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238088"
+ gene complement(586906..587823)
+ /locus_tag="SARI_00585"
+ CDS complement(586906..587823)
+ /locus_tag="SARI_00585"
+ /inference="similar to AA sequence:SwissProt:Q57M43"
+ /note="'KEGG: stt:t0550 1.8e-116 ribonuclease Z K00784;
+ COG: COG1234 Metal-dependent hydrolases of the
+ beta-lactamase superfamily III;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569653.2"
+ /db_xref="GI:448236199"
+ /translation="MELIFLGTSAGVPTRSRNVTAILLHLQHPTQPGVWLFDCGEGTQ
+ HQMLNTAFHPGKLERIFISHLHGDHLFGLPGLLCSRSMAGNPHPLTVYGPQGVREFIA
+ TTLRLSGSWTDFPLQIEEISAGDILDDGLRKVTAFRLEHPLECYGYRVVEHDKPGALN
+ ARALKAAGVTPGPLFQALKAGKTVTLADGRQINGADYLAPAVAGKSVAIFGDTAPCEA
+ ALALAQGVDVMVHETTLDVSMEEKANARGHSSTRQTATLAREAAVGRLIMTHISSRYD
+ DKGCQRLLAECRAIFPATELAYDFSVFPV"
+ misc_feature complement(586909..587817)
+ /locus_tag="SARI_00585"
+ /note="ribonuclease BN; Region: true_RNase_BN; TIGR02649"
+ /db_xref="CDD:131697"
+ gene 587884..588345
+ /locus_tag="SARI_00587"
+ CDS 587884..588345
+ /locus_tag="SARI_00587"
+ /inference="protein motif:HMMPfam:IPR000182"
+ /inference="similar to AA sequence:INSD:AAL21213.1"
+ /note="'KEGG: vfi:VF0317 4.3e-28 acetyltransferase
+ K02348;
+ COG: COG2153 Predicted acyltransferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569655.1"
+ /db_xref="GI:161502543"
+ /db_xref="InterPro:IPR000182"
+ /translation="MIDWQDLHHSELTVPQLYALLKLRCAVFVVEQRCPYLDVDGDDL
+ VGDNRHILGWHHDELVAYARILKSDNESDPVVIGRVIVSDAWRGAKLGQQLMAKTLES
+ CGRHWPDKPLYLGAQAHLQPFYARFGFIPVTDVYDEDGIPHRGMAREVHQA"
+ misc_feature 588031..>588186
+ /locus_tag="SARI_00587"
+ /note="N-Acyltransferase superfamily: Various enzymes that
+ characteristically catalyze the transfer of an acyl group
+ to a substrate; Region: NAT_SF; cd04301"
+ /db_xref="CDD:173926"
+ misc_feature order(588121..588129,588157..588162)
+ /locus_tag="SARI_00587"
+ /note="Coenzyme A binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:173926"
+ gene 588394..588705
+ /locus_tag="SARI_00588"
+ CDS 588394..588705
+ /locus_tag="SARI_00588"
+ /inference="protein motif:HMMPfam:IPR010279"
+ /inference="similar to AA sequence:REFSEQ:NP_456854.1"
+ /note="'KEGG: pca:Pcar_1199 0.00073 MCP methyltransferase,
+ CheR-type K00575;
+ COG: COG4575 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569656.1"
+ /db_xref="GI:161502544"
+ /db_xref="InterPro:IPR010279"
+ /translation="MRMSYQFGESRVDDDLTLLSETLEEVLRSSGDPADQKYIELKAR
+ AEQALEEVKNRVSQASDSYYYRAKQAVYKADDYVHEKPWQGIGVGAAVGLVLGLLLAR
+ R"
+ misc_feature 588400..588651
+ /locus_tag="SARI_00588"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10404"
+ /db_xref="CDD:182432"
+ gene 588808..590103
+ /locus_tag="SARI_00589"
+ CDS 588808..590103
+ /locus_tag="SARI_00589"
+ /inference="protein motif:BlastProDom:IPR005801"
+ /inference="protein motif:HMMPfam:IPR005801"
+ /inference="protein motif:HMMPIR:IPR004561"
+ /inference="protein motif:HMMTigr:IPR004561"
+ /inference="similar to AA sequence:INSD:AAX66216.1"
+ /note="'KEGG: sec:SC2310 5.9e-230 menF; isochorismate
+ synthase (isochorismate hydroxymutase 2), menaquinone
+ biosynthesis K02552;
+ COG: COG1169 Isochorismate synthase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="menaquinone-specific isochorismate synthase"
+ /protein_id="YP_001569657.1"
+ /db_xref="GI:161502545"
+ /db_xref="InterPro:IPR004561"
+ /db_xref="InterPro:IPR005801"
+ /translation="MHSITTALENLTRQLSQEIPATPGLCVFEAPFPLNDAFDALSWL
+ ASQSSFPQFYWQQRNGDEEAAVLGAVTVFSSLDLAQRFLRQHQQPDLRIWGLNAFEPK
+ ESYLLLPRLEWRRSGGTATLRLHLHSDVSLRDDARQARAFLASLVGIKPVPALRLSLT
+ GEQHWPDKDGWVKLIQQATHAIAQEAFDKVVLARATDLQFSRPVNAAAMMASSRRLNL
+ NCYHFFMAFSADSAFLGSSPERLWRRRETALRTEALAGTVANHPDNHKAWQLGEWLMK
+ DDKNQRENILVVEDICQRLQHCTHSLDVLPPQVLRLRKVQHLRRCIWTALNQADDTLC
+ LHQLQPTAAVAGIPREPARCFIEQHEPFEREWYAGSAGYLSTRQSEFCVTLRSAKVTA
+ NVVRLYAGAGIVRGSDPEQEWQEIDNKAAGLRTLLQMDA"
+ misc_feature 588808..590097
+ /locus_tag="SARI_00589"
+ /note="menaquinone-specific isochorismate synthase;
+ Provisional; Region: PRK15012"
+ /db_xref="CDD:184974"
+ misc_feature 589078..590088
+ /locus_tag="SARI_00589"
+ /note="isochorismate synthases; Region: isochor_syn;
+ TIGR00543"
+ /db_xref="CDD:233014"
+ gene 590189..591859
+ /locus_tag="SARI_00590"
+ CDS 590189..591859
+ /locus_tag="SARI_00590"
+ /inference="protein motif:HMMPIR:IPR004433"
+ /inference="protein motif:HMMTigr:IPR004433"
+ /inference="similar to AA sequence:INSD:AAL21210.1"
+ /note="SEPHCHC synthase; forms
+ 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-
+ carboxylate from 2-oxoglutarate and isochorismate in
+ menaquinone biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="2-succinyl-5-enolpyruvyl-6-hydroxy-3-
+ cyclohexene-1-carboxylate synthase"
+ /protein_id="YP_001569658.1"
+ /db_xref="GI:161502546"
+ /db_xref="InterPro:IPR004433"
+ /translation="MSVSAFNRRWAAVILEALTRHGVRHVCIAPGSRSTPLTLAAAEN
+ PAFIHHTHFDERGLGHLALGLAKASKQPVAVIVTSGTAVANLYPALIEAGLTGEKLIL
+ LTADRPPELIDCGANQAIRQAGIFASHPSQTLSLPRPTQDIPARWLVSTIDNALAMLH
+ AGALHINCPFAEPLYGDMNDTGLVWQQRLGDWWQDEKPWLREARRRESDKQRDWFFWR
+ QKRGVVVAGRMSAEEGKKVAQWAQTLGWPLIGDVLSQTGQPLPCADLWLGNAKAVTEL
+ QQAQIVVQLGSSLTGKRLLQWQATCEPEEYWVIDNIEGRLDPAHHRGRRLVAKIADWL
+ ELHPAEKRKPWCVEIPRLAELAWQRVVAQRDTFGEAQLAHRIRDYLPEQGQLFVGNSL
+ VVRLIDALSQLPAGYPVYSNRGASGIDGLLSTAAGVQRASAKSTLAIVGDLSALYDLN
+ ALALLRQVSAPFVLIVVNNNGGQIFSLLPTPQSKRERFYLMPQNVHFDHAAAMFNLRY
+ HRPENWEELELALASAWRTPATTLIELVVNETDGAQTLQQLLAQVSHL"
+ misc_feature 590189..591856
+ /locus_tag="SARI_00590"
+ /note="2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-
+ carboxylate synthase; Validated; Region: PRK07449"
+ /db_xref="CDD:236020"
+ misc_feature 590222..590698
+ /locus_tag="SARI_00590"
+ /note="Pyrimidine (PYR) binding domain of
+ 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-
+ carboxylate synthase (MenD) and related proteins; Region:
+ TPP_PYR_MenD; cd07037"
+ /db_xref="CDD:132920"
+ misc_feature order(590270..590272,590276..590281,590291..590293,
+ 590333..590335,590339..590356,590429..590431,
+ 590438..590443,590447..590452,590459..590461,
+ 590516..590518,590537..590542,590549..590551,
+ 590561..590563,590570..590575)
+ /locus_tag="SARI_00590"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:132920"
+ misc_feature order(590270..590272,590276..590281,590291..590293,
+ 590333..590335,590339..590356,590429..590431,
+ 590438..590443,590447..590452,590459..590461,
+ 590516..590518,590537..590542,590549..590551,
+ 590561..590563,590570..590575)
+ /locus_tag="SARI_00590"
+ /note="tetramer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:132920"
+ misc_feature order(590270..590272,590276..590281,590291..590293,
+ 590333..590359,590366..590371,590375..590383,
+ 590387..590392,590429..590431,590441..590443,
+ 590450..590452,590462..590464,590471..590473,
+ 590537..590542)
+ /locus_tag="SARI_00590"
+ /note="PYR/PP interface [polypeptide binding]; other site"
+ /db_xref="CDD:132920"
+ misc_feature 590351..590353
+ /locus_tag="SARI_00590"
+ /note="TPP binding site [chemical binding]; other site"
+ /db_xref="CDD:132920"
+ misc_feature 591287..591802
+ /locus_tag="SARI_00590"
+ /note="Thiamine pyrophosphate (TPP) family, SHCHC synthase
+ subfamily, TPP-binding module; composed of proteins
+ similar to Escherichia coli
+ 2-succinyl-6-hydroxyl-2,4-cyclohexadiene-1-carboxylic acid
+ (SHCHC) synthase (also called MenD). SHCHC synthase plays
+ a key...; Region: TPP_SHCHC_synthase; cd02009"
+ /db_xref="CDD:238967"
+ misc_feature order(591440..591442,591509..591520,591593..591595,
+ 591599..591601)
+ /locus_tag="SARI_00590"
+ /note="TPP-binding site; other site"
+ /db_xref="CDD:238967"
+ gene 591856..592614
+ /locus_tag="SARI_00591"
+ CDS 591856..592614
+ /locus_tag="SARI_00591"
+ /inference="protein motif:HMMPfam:IPR000073"
+ /inference="similar to AA sequence:REFSEQ:YP_217295.1"
+ /note="catalyzes the hydrolysis of the thioester bond in
+ palmitoyl-CoA"
+ /codon_start=1
+ /transl_table=11
+ /product="acyl-CoA thioester hydrolase YfbB"
+ /protein_id="YP_001569659.1"
+ /db_xref="GI:161502547"
+ /db_xref="InterPro:IPR000073"
+ /translation="MMLHAQNMPGQSGMPWLVFLHGFSGDCREWQPVGEQFHTCSRLY
+ IDLPGHGGSAAIPVGGFADVFQLLRATLISYNILKFWLVGYSLGGRVAMMAACQGIPG
+ LCGLVVEGGHPGLQNEQARAERRLSDGRWAERFRREPLSTVFHDWYQQSVFTSLTAQQ
+ RQALTALRSQNNGETLAAMLEATSLAAQPDLREALNALTFPFYYLCGERDSKFRALAQ
+ EVAATCHVIRNAGHNAHRENPAGVVDSLAQILRL"
+ misc_feature 591892..592611
+ /locus_tag="SARI_00591"
+ /note="2-succinyl-6-hydroxy-2,
+ 4-cyclohexadiene-1-carboxylate synthase; Provisional;
+ Region: PRK11126"
+ /db_xref="CDD:236855"
+ gene 592629..593486
+ /locus_tag="SARI_00592"
+ CDS 592629..593486
+ /locus_tag="SARI_00592"
+ /inference="protein motif:HMMPfam:IPR001753"
+ /inference="protein motif:HMMTigr:IPR010198"
+ /inference="protein motif:ScanRegExp:IPR001753"
+ /inference="similar to AA sequence:INSD:AAV76558.1"
+ /note="'catalyzes the formation of
+ 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA'"
+ /codon_start=1
+ /transl_table=11
+ /product="naphthoate synthase"
+ /protein_id="YP_001569660.1"
+ /db_xref="GI:161502548"
+ /db_xref="InterPro:IPR001753"
+ /db_xref="InterPro:IPR010198"
+ /translation="MIYPDETMLYAPVEWHDCSEGYTDIRYEKSTDGIAKITINRPQV
+ RNAFRPLTVKEMIQALADARYDDNVGVIILTGEGDKAFCAGGDQKVRGDYGGYQDDSG
+ VHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAAENAIFGQTGPKVG
+ SFDGGWGASYMARIVGQKKAREIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWC
+ REMLQNSPMALRCLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQP
+ DFSKFKRNP"
+ misc_feature 592701..593291
+ /locus_tag="SARI_00592"
+ /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
+ superfamily. This superfamily contains a diverse set of
+ enzymes including enoyl-CoA hydratase, napthoate synthase,
+ methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
+ dehydratase, and dienoyl-CoA isomerase; Region:
+ crotonase-like; cd06558"
+ /db_xref="CDD:119339"
+ misc_feature 592722..593447
+ /locus_tag="SARI_00592"
+ /note="Enoyl-CoA hydratase/isomerase family; Region: ECH;
+ pfam00378"
+ /db_xref="CDD:201191"
+ misc_feature order(592761..592763,592767..592769,592866..592868,
+ 592878..592892,593013..593015,593019..593027,
+ 593091..593096,593103..593105)
+ /locus_tag="SARI_00592"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:119339"
+ misc_feature order(592884..592886,593025..593027)
+ /locus_tag="SARI_00592"
+ /note="oxyanion hole (OAH) forming residues; other site"
+ /db_xref="CDD:119339"
+ misc_feature order(592965..592967,592989..592991,593052..593063,
+ 593097..593108,593124..593126,593130..593138,
+ 593142..593147,593160..593165,593169..593174,
+ 593178..593183,593190..593192,593223..593225,
+ 593232..593234,593277..593279,593286..593291)
+ /locus_tag="SARI_00592"
+ /note="trimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119339"
+ gene 593486..594448
+ /locus_tag="SARI_00593"
+ CDS 593486..594448
+ /locus_tag="SARI_00593"
+ /inference="protein motif:HMMTigr:IPR010196"
+ /inference="similar to AA sequence:REFSEQ:NP_456849.1"
+ /note="'catalyzes the dehydration of
+ 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid
+ to form O-succinylbenzoate'"
+ /codon_start=1
+ /transl_table=11
+ /product="O-succinylbenzoate synthase"
+ /protein_id="YP_001569661.1"
+ /db_xref="GI:161502549"
+ /db_xref="InterPro:IPR010196"
+ /translation="MRSAQVYRWQIPMDAGVVLRDRRLKTRDGLYVCLRDGEREGWGE
+ ISPLPGFSSETWEEAQTALLTWVNDWLQRSDALPEMPSVAFGASCALAELTGVLPAAA
+ DYRAAPLCTGDPDDLVLRLADMPGEKIAKVKVGLYEAVRDGMVVNLLLEAIPDLHLRL
+ DANRAWTPLKAQQFAKYVNPDYRPRIAFLEEPCKTRDDSCAFARETGIAIAWDESLRE
+ PDFVFEAQEGVSAVVIKPMLTGALDKVRAQVAAAHALGLTAVISSSIESSLGLTQLAR
+ IAAWLTPGTLPGLDTLHLMQTQQVRPWPGSALPCLNRDELERLL"
+ misc_feature 593486..594445
+ /locus_tag="SARI_00593"
+ /note="O-succinylbenzoate synthase; Provisional; Region:
+ PRK05105"
+ /db_xref="CDD:235345"
+ misc_feature 593495..594325
+ /locus_tag="SARI_00593"
+ /note="o-Succinylbenzoate synthase (OSBS) catalyzes the
+ conversion of
+ 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate
+ (SHCHC) to 4-(2'-carboxyphenyl)-4-oxobutyrate
+ (o-succinylbenzoate or OSB), a reaction in the menaquinone
+ biosynthetic pathway; Region: OSBS; cd03320"
+ /db_xref="CDD:239436"
+ misc_feature order(593876..593878,593966..593968,593972..593974,
+ 594053..594055,594122..594124,594188..594190,
+ 594269..594274)
+ /locus_tag="SARI_00593"
+ /note="active site"
+ /db_xref="CDD:239436"
+ gene 594445..595812
+ /locus_tag="SARI_00594"
+ CDS 594445..595812
+ /locus_tag="SARI_00594"
+ /inference="protein motif:HMMPfam:IPR000873"
+ /inference="protein motif:HMMTigr:IPR010192"
+ /inference="protein motif:ScanRegExp:IPR000873"
+ /inference="similar to AA sequence:REFSEQ:NP_461247.1"
+ /note="'KEGG: stm:STM2305 1.0e-234 menE; O-succinylbenzoic
+ acid--CoA ligase K01911;
+ COG: COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid
+ ligases II;
+ Psort location: endoplasmic reticulum, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="O-succinylbenzoic acid--CoA ligase"
+ /protein_id="YP_001569662.1"
+ /db_xref="GI:161502550"
+ /db_xref="InterPro:IPR000873"
+ /db_xref="InterPro:IPR010192"
+ /translation="MTLTDWPWRHWRQLRGSAPALRLNDEVLSWRALCERIDVLAGGF
+ AAQGVRESDGVLLRAWNHPHTLLAWLALMQCGARVLPVNPQLPQTLLEALVPELTLRF
+ ALTLEGENAFSGLTALQMRKSTEAYAVAWQPQRLVSMTLTSGSTGLPKAAIHTYRAHL
+ ASAQGVLSLMPFGPQDDWLLSLPLFHVSGQGIMWRWLFAGARMTVRDKQPLEQMLAGC
+ THASLVPTQLWRLLANQAAVTLKAVLLGGAVIPVELTNQASRQGIRCWCGYGLTEFAS
+ TVCAKEADGSDDVGAPLPGREVRIVDNEVWLRAASMAEGYWRDGKLIPLVNDEGWFAT
+ RDRGALNHGRLTIAGRLDNLFFSGGEGIQPEEVERIINAHPLVQQAFVVPVEDKEFGH
+ RPVAVVEYVSQAGEVNLAEWVSDKLARFQQPVRWLTLPPELKNGGIKISRRALQQWVC
+ KSGKN"
+ misc_feature 594445..595797
+ /locus_tag="SARI_00594"
+ /note="O-succinylbenzoic acid--CoA ligase; Provisional;
+ Region: PRK09029"
+ /db_xref="CDD:236363"
+ misc_feature 594526..595785
+ /locus_tag="SARI_00594"
+ /note="O-succinylbenzoate-CoA ligase (also known as
+ O-succinylbenzoate-CoA synthase, OSB-CoA synthetase, or
+ MenE); Region: OSB_CoA_lg; cd05912"
+ /db_xref="CDD:213280"
+ misc_feature order(594859..594861,594868..594885,594889..594894)
+ /locus_tag="SARI_00594"
+ /note="acyl-activating enzyme (AAE) consensus motif; other
+ site"
+ /db_xref="CDD:213280"
+ misc_feature order(594868..594870,595180..595185,595243..595260,
+ 595450..595452,595483..595485,595492..595494,
+ 595525..595527,595759..595761)
+ /locus_tag="SARI_00594"
+ /note="putative AMP binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:213280"
+ misc_feature order(594868..594870,594988..594993,595114..595116,
+ 595120..595125,595132..595134,595180..595185,
+ 595243..595260,595450..595452,595483..595485,
+ 595492..595494,595516..595527,595702..595704)
+ /locus_tag="SARI_00594"
+ /note="putative active site [active]"
+ /db_xref="CDD:213280"
+ misc_feature order(594988..594990,595120..595125,595132..595134,
+ 595180..595182,595516..595524,595684..595686,
+ 595702..595704)
+ /locus_tag="SARI_00594"
+ /note="putative CoA binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:213280"
+ gene 595910..596167
+ /locus_tag="SARI_00595"
+ CDS 595910..596167
+ /locus_tag="SARI_00595"
+ /inference="similar to AA sequence:INSD:AAV92869.1"
+ /note="'COG: NOG11335 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569663.1"
+ /db_xref="GI:161502551"
+ /translation="MEWLVKKSHYVKKMARHVLVLCDSGGSLKMIAEANSMILLSPGD
+ ILSPLKDAQYCINREKHQILKIINARCYSCDEWQRLTRKPS"
+ misc_feature 595910..596164
+ /locus_tag="SARI_00595"
+ /note="signal transduction protein PmrD; Provisional;
+ Region: PRK15450"
+ /db_xref="CDD:185347"
+ gene complement(596109..596528)
+ /locus_tag="SARI_00596"
+ CDS complement(596109..596528)
+ /locus_tag="SARI_00596"
+ /inference="similar to AA sequence:INSD:AAX66210.1"
+ /note="'COG: COG0697 Permeases of the drug/metabolite
+ transporter (DMT) superfamily;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569664.1"
+ /db_xref="GI:161502552"
+ /translation="MGVMWGLISVAIASLAQLSLGFSMMRLPSIAHPLAFIAGLGAFT
+ TATLALFAGLAGYLIPVSCWQKTLHSLALSKTYALLSLSYVLVRVVTRSVRRFLSKSD
+ ARRIVHCGGDNADFPARQLMMACASTAAIRRRNNIEH"
+ misc_feature complement(<596295..596528)
+ /locus_tag="SARI_00596"
+ /note="4-amino-4-deoxy-L-arabinose-phosphoundecaprenol
+ flippase subunit ArnF; Provisional; Region: PRK02971"
+ /db_xref="CDD:235094"
+ gene complement(596595..596735)
+ /locus_tag="SARI_00598"
+ CDS complement(596595..596735)
+ /locus_tag="SARI_00598"
+ /inference="similar to AA sequence:SwissProt:O52328"
+ /note="'COG: COG0697 Permeases of the drug/metabolite
+ transporter (DMT) superfamily;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569665.1"
+ /db_xref="GI:161502554"
+ /translation="MLARLFSVGSQLCQKHATRPLTASGRRHLMLWLGLVLICMGAAI
+ VL"
+ misc_feature complement(<596598..596735)
+ /locus_tag="SARI_00598"
+ /note="4-amino-4-deoxy-L-arabinose-phosphoundecaprenol
+ flippase subunit ArnE; Provisional; Region: PRK15051"
+ /db_xref="CDD:185011"
+ gene 596652..596762
+ /locus_tag="SARI_00597"
+ CDS 596652..596762
+ /locus_tag="SARI_00597"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569666.1"
+ /db_xref="GI:161502553"
+ /translation="MAASARRQWPCRVLLTELTADAEQPGEHQSYADQLG"
+ gene complement(596750..598396)
+ /gene="arnT"
+ /locus_tag="SARI_00599"
+ CDS complement(596750..598396)
+ /gene="arnT"
+ /locus_tag="SARI_00599"
+ /inference="protein motif:HMMPfam:IPR003342"
+ /inference="similar to AA sequence:INSD:AAL21202.1"
+ /note="catalyzes the addition of
+ 4-amino-4-deoxy-L-arabinose to lipid A"
+ /codon_start=1
+ /transl_table=11
+ /product="4-amino-4-deoxy-L-arabinose transferase"
+ /protein_id="YP_001569667.1"
+ /db_xref="GI:161502555"
+ /db_xref="InterPro:IPR003342"
+ /translation="MMKPMRYYLAFAAFIALYYIIPVNFRLLWQPDETRYAEISREML
+ ASGDWIVPHFLGLRYFEKPIAGYWLNSLGQWLFGATNFGVRAGAILTTLLAAALVAWL
+ TLRLWRDKRTALLASVIFLSLFAVYSIGTYAALAPMIALWLTAGMCCFWQGMQATTRM
+ GRIGMFLLLGAICGLGVLTKGFLALAVPVISVLPWVIVQKRWKEFLLYGWLAVLSCLM
+ VVVPWAIAIARREADFWHYFFWVEHIQRFAMSDARHKAPFWYYLPVLLVGSLPWLGLL
+ PGALKLGWRERNGAFYLLGWTIMPLLFFSIAKGKLPTYILSCFAPIAILMARFVLHNV
+ KEGVFALRVNGGINLAFGLIGIVAAFVVSSWGPLTSPVWTHIETYKVFCVWGVFTVWA
+ FVGWYSLCNSQKYMLPAFCPLGLALLFGFSVPDRVMESKQPQFFVDMTRVPLASSRYI
+ LTDSVGVAAGLAWSLKRDDIMLYGYTGELRYGLSYPDVHDKFVKANDFNAWLNQHRQR
+ GIITLVLSIAKDEDISALAIPPASNIDYQGRLVLIQYQPN"
+ misc_feature complement(596756..598396)
+ /gene="arnT"
+ /locus_tag="SARI_00599"
+ /note="4-amino-4-deoxy-L-arabinose transferase;
+ Provisional; Region: arnT; PRK13279"
+ /db_xref="CDD:237330"
+ misc_feature complement(596834..598330)
+ /gene="arnT"
+ /locus_tag="SARI_00599"
+ /note="4-amino-4-deoxy-L-arabinose transferase and related
+ glycosyltransferases of PMT family [Cell envelope
+ biogenesis, outer membrane]; Region: ArnT; COG1807"
+ /db_xref="CDD:224720"
+ gene complement(598393..599613)
+ /locus_tag="SARI_00600"
+ CDS complement(598393..599613)
+ /locus_tag="SARI_00600"
+ /inference="protein motif:HMMPfam:IPR000653"
+ /inference="similar to AA sequence:INSD:AAC04770.1"
+ /note="'KEGG: eci:UTI89_C2535 2.5e-87 yfbE; putative
+ glutamine-scyllo-inositol transaminase K07806;
+ COG: COG0399 Predicted pyridoxal phosphate-dependent
+ enzyme apparently involved in regulation of cell wall
+ biogenesis;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569668.1"
+ /db_xref="GI:161502556"
+ /db_xref="InterPro:IPR000653"
+ /translation="MSDFLPFSRPAMGTEELAAVKTELDPGWITTGPENQGLEAEFCR
+ LTGNQYAVAVSSATSGMHIALMPLNIGEGDEIITPSMTWVSTLNMIVLLSANAVMVDV
+ DRDTLMVTPEHIEAVITPRTKAIIPLHYAGAPADLDAIHALGDYSITVIEDAAHTTGT
+ GYKGHHIGARGTAIFSFHAIKNITCAEGGIVVTVNPQFADKLHSIKFHGLGVDAWYHH
+ VWQTHCGHRSIRQLEEDIARGITALQAIIGKPVTCSASAKWRGDRRIVRAKEPFNLRY
+ NSDCRRSALFRPGLIPGQAGTPQIPVTLPTWDKIIGPAVQAQAFNAWIISHMLQDKGT
+ PVYTIHAEVEDIVHQPLFENLLARARDTGITFCPLGELLPTSPGILPLGQIVRRHIPG
+ RDGWLEGQQTVSAS"
+ misc_feature complement(<598900..599613)
+ /locus_tag="SARI_00600"
+ /note="Predicted pyridoxal phosphate-dependent enzyme
+ apparently involved in regulation of cell wall biogenesis
+ [Cell envelope biogenesis, outer membrane]; Region: WecE;
+ COG0399"
+ /db_xref="CDD:223476"
+ misc_feature complement(<598870..599568)
+ /locus_tag="SARI_00600"
+ /note="3-amino-5-hydroxybenzoic acid synthase family
+ (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate
+ (PLP)-dependent aspartate aminotransferase superfamily
+ (fold I). The members of this CD are involved in various
+ biosynthetic pathways for secondary...; Region: AHBA_syn;
+ cd00616"
+ /db_xref="CDD:99740"
+ misc_feature complement(order(599071..599076,599086..599088,
+ 599146..599148,599155..599157,599440..599445))
+ /locus_tag="SARI_00600"
+ /note="inhibitor-cofactor binding pocket; inhibition site"
+ /db_xref="CDD:99740"
+ misc_feature complement(order(599071..599073,599086..599088,
+ 599146..599148,599155..599157,599368..599370,
+ 599440..599445))
+ /locus_tag="SARI_00600"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:99740"
+ misc_feature complement(599071..599073)
+ /locus_tag="SARI_00600"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:99740"
+ misc_feature complement(598423..>598992)
+ /locus_tag="SARI_00600"
+ /note="Catalytic NodB homology domain of the carbohydrate
+ esterase 4 superfamily; Region: CE4_SF; cl15692"
+ /db_xref="CDD:247041"
+ gene 599911..600516
+ /locus_tag="SARI_00601"
+ CDS 599911..600516
+ /locus_tag="SARI_00601"
+ /inference="protein motif:HMMPfam:IPR013078"
+ /inference="protein motif:HMMPIR:IPR011310"
+ /inference="similar to AA sequence:INSD:AAL21197.1"
+ /note="'COG: NOG08101 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569669.1"
+ /db_xref="GI:161502557"
+ /db_xref="InterPro:IPR011310"
+ /db_xref="InterPro:IPR013078"
+ /translation="MLAFILRFIKNKSYFALLAGAWVIIAGLTSQHAWSGNGLPQING
+ NTLAALAKQYPVVVLFRHAERCDRSDNTCLSDSSGITVNGAQNARSLGKDFNADIQNY
+ NLYSSNTVRTIQSATWFSAGRSLTVDKKMMDCGSGIYASINTLLKKSQNKNVVIFTHN
+ HCLTYIAKNKRGVKFEPDYLDALVMHAANGKLFLDGEFVPG"
+ misc_feature 600076..>600414
+ /locus_tag="SARI_00601"
+ /note="Histidine phosphatase domain found in a
+ functionally diverse set of proteins, mostly phosphatases;
+ contains a His residue which is phosphorylated during the
+ reaction; Region: HP; cd07040"
+ /db_xref="CDD:132716"
+ misc_feature order(600091..600096,600241..600243,600385..600390)
+ /locus_tag="SARI_00601"
+ /note="catalytic core [active]"
+ /db_xref="CDD:132716"
+ gene complement(600562..600987)
+ /locus_tag="SARI_00602"
+ CDS complement(600562..600987)
+ /locus_tag="SARI_00602"
+ /inference="protein motif:FPrintScan:IPR000086"
+ /inference="protein motif:Gene3D:IPR000086"
+ /inference="protein motif:HMMPfam:IPR000086"
+ /inference="protein motif:ScanRegExp:IPR000086"
+ /inference="protein motif:superfamily:IPR000086"
+ /inference="similar to AA sequence:INSD:CAD07528.1"
+ /note="'KEGG: ecc:c2793 3.7e-54 yfaO; putative NUDIX
+ hydrolase YfaO;
+ COG: COG0494 NTP pyrophosphohydrolases including oxidative
+ damage repair enzymes;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="nucleoside triphosphatase NudI"
+ /protein_id="YP_001569670.2"
+ /db_xref="GI:448236200"
+ /db_xref="InterPro:IPR000086"
+ /translation="MRQRTIVCPLIQNDGCYLLCKMADNRGVFPGQWALSGGGVEPGE
+ RIEEALRREIREELGEQLILSDITPWTFRDDIRVKTYADGRQEEIYMIYLIFDCVSAN
+ RDICINDEFQDYAWVRPEEFALYDLNVATRHTLRLKGLL"
+ misc_feature complement(600565..600987)
+ /locus_tag="SARI_00602"
+ /note="nucleoside triphosphatase NudI; Provisional;
+ Region: PRK15472"
+ /db_xref="CDD:185369"
+ gene 601134..601808
+ /locus_tag="SARI_00603"
+ CDS 601134..601808
+ /locus_tag="SARI_00603"
+ /inference="protein motif:HMMPfam:IPR009998"
+ /inference="similar to AA sequence:INSD:CAD07527.1"
+ /note="'COG: NOG08732 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569671.1"
+ /db_xref="GI:161502559"
+ /db_xref="InterPro:IPR009998"
+ /translation="MVKVVFRYNMFLEWFFSALIPQRLAVQFCRFGEFFFMCLLERVK
+ MKKSILLGFAGMLFVSASAQAISISGQAGKDYTNIGVGFGTESTGLALSGNWMHNDDD
+ GDAAGVGLGLNIPVGPLLATVGGKGIYTNPKDSDEGYAAAVGGGLQWKIGDSFRLFGE
+ YYYSPDSLSSGIESYEEANAGARFTLMRPLSIEAGYRYLNLAGKDGNRDNAIADGPYI
+ GVNASF"
+ misc_feature 601266..601805
+ /locus_tag="SARI_00603"
+ /note="YfaZ precursor; Region: YfaZ; pfam07437"
+ /db_xref="CDD:116058"
+ gene 601923..603119
+ /locus_tag="SARI_00604"
+ CDS 601923..603119
+ /locus_tag="SARI_00604"
+ /inference="protein motif:BlastProDom:IPR001453"
+ /inference="protein motif:HMMPfam:IPR001453"
+ /inference="protein motif:HMMPIR:IPR008135"
+ /inference="protein motif:HMMTigr:IPR001453"
+ /inference="protein motif:HMMTigr:IPR008135"
+ /inference="protein motif:superfamily:IPR001453"
+ /inference="similar to AA sequence:INSD:AAO68276.1"
+ /note="'KEGG: mmu:319945 2.9e-05 Flad1; RFad1, flavin
+ adenine dinucleotide synthetase, homolog (yeast) K00953;
+ COG: COG1058 Predicted nucleotide-utilizing enzyme related
+ to molybdopterin-biosynthesis enzyme MoeA;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="competence damage-inducible protein A"
+ /protein_id="YP_001569672.1"
+ /db_xref="GI:161502560"
+ /db_xref="InterPro:IPR001453"
+ /db_xref="InterPro:IPR008135"
+ /translation="MLNVEMLSTGDEVLHGQIVDTNAAWLADFFFNQGVPLSRRNTVG
+ DNLDSLVAILRERSQHTDVLIVNGGLGPTSDDLSALAAATAKGEGLVLHEEWLAEMER
+ YFQQRGRVMAPSNRKQAELPASAEFIPNPVGTACGFALQLNRCLMFFTPGVPSEFKVM
+ VEQEILPRLRARFSLPEPPLCLRLTTFGRSESDLAQSLDSLSLPPGVTMGYRSSMPII
+ ELKLTGPATQREAMLALWSEVRRVAGQNLIFEGTEDLPAQIARCLQERQLSLTLSEQY
+ TSGLLALQLSRAGAPVLASEVVPSQEETLAQTAHWTTERRSNHYAGLALAVSGLENEH
+ LNFALATPDGTYALRVRFSANCYSLAIRQEVCAMMALIMLRRWLNGEDMTSEHGWINV
+ VESLTA"
+ misc_feature 601923..603110
+ /locus_tag="SARI_00604"
+ /note="hypothetical protein; Provisional; Region:
+ PRK03673"
+ /db_xref="CDD:179629"
+ misc_feature 601929..602438
+ /locus_tag="SARI_00604"
+ /note="Competence-damaged protein. CinA is the first gene
+ in the competence- inducible (cin) operon and is thought
+ to be specifically required at some stage in the process
+ of transformation. This domain is closely related to a
+ domain, found in a variety of...; Region: cinA; cd00885"
+ /db_xref="CDD:238450"
+ misc_feature order(602127..602135,602373..602378,602388..602390,
+ 602397..602399)
+ /locus_tag="SARI_00604"
+ /note="putative MPT binding site; other site"
+ /db_xref="CDD:238450"
+ misc_feature 602679..603056
+ /locus_tag="SARI_00604"
+ /note="Competence-damaged protein; Region: CinA; cl00666"
+ /db_xref="CDD:242014"
+ gene complement(603219..604241)
+ /locus_tag="SARI_00605"
+ CDS complement(603219..604241)
+ /locus_tag="SARI_00605"
+ /inference="similar to AA sequence:REFSEQ:YP_217277.1"
+ /note="'similar to ElaD; specific cysteine protease which
+ targets ubiquitin and ubiquitin-like proteins covalently
+ bound to target proteins; SseL in Salmonella is required
+ for macrophage killing and virulence, and it is secreted
+ by the salmonella pathogenicity island 2 type III
+ secretion system'"
+ /codon_start=1
+ /transl_table=11
+ /product="deubiquitinase"
+ /protein_id="YP_001569673.1"
+ /db_xref="GI:161502561"
+ /translation="MNICVNSLYRLSTPQFQNLYSEEVSDEGLALLIREVENGDQNCI
+ DLLCNLALRNDDLGHKVEKILFDLFSGKKHGSPDIDKKINQACLMLYQTANNDIAKNN
+ TDFKKLHIPSRLLYMAGSATPDFSKKLEIAHKILGDQIAQTEEEQVGVENLWCPARMV
+ SSDELSRATQGMTQGLSLSVNYPIGLIHPTTGENVLSAQLHEKVAQSGLSDNEVFLIN
+ TESHWIFCLFYKIAEKIKCLIFNTHHDLNQNTKQEIRAAAKIAGASEEGDVNFIEIDL
+ QNNVPNGCGLFCFQALQLLSATGQNDPVAVLREYSENFLRLSVEEQTLFNTETRRKIH
+ EYSLTS"
+ misc_feature complement(603225..604172)
+ /locus_tag="SARI_00605"
+ /note="deubiquitinase SseL; Provisional; Region: PRK14848"
+ /db_xref="CDD:184850"
+ gene complement(604608..605798)
+ /gene="glpC"
+ /locus_tag="SARI_00606"
+ CDS complement(604608..605798)
+ /gene="glpC"
+ /locus_tag="SARI_00606"
+ /inference="protein motif:Gene3D:IPR012285"
+ /inference="protein motif:HMMPfam:IPR001450"
+ /inference="protein motif:HMMPfam:IPR004017"
+ /inference="protein motif:HMMPIR:IPR011349"
+ /inference="protein motif:ScanRegExp:IPR001450"
+ /inference="protein motif:superfamily:IPR009051"
+ /inference="similar to AA sequence:INSD:AAX66195.1"
+ /note="anaerobic; with GlpAB catalyzes the conversion of
+ glycerol-3-phosphate to dihydroxyacetone phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="sn-glycerol-3-phosphate dehydrogenase subunit C"
+ /protein_id="YP_001569674.1"
+ /db_xref="GI:161502562"
+ /db_xref="InterPro:IPR001450"
+ /db_xref="InterPro:IPR004017"
+ /db_xref="InterPro:IPR009051"
+ /db_xref="InterPro:IPR011349"
+ /db_xref="InterPro:IPR012285"
+ /translation="MSDTRFESCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLK
+ DGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFILSHTDLMG
+ SVSTPFAPVVNTATALKPVRQLLDYALKIDHRRALPKYSFGTFRRWYRSVAAAQAKYT
+ DQVAFFHGCFVNYNHPQLGKDLINVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQ
+ AISNVESLREAIAVKGIPVIATSSTCTFALRDEYPEVLDVDNAGLREHIELATRWLWR
+ KLDAGQTLPLNPLPLKVVYHTPCHMEKMGWTLYTLELLRQIPGLELTVLDSQCCGIAG
+ TYGFKKENYPTSQSIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSKRCEHPITLLA
+ QALG"
+ misc_feature complement(604614..605792)
+ /gene="glpC"
+ /locus_tag="SARI_00606"
+ /note="glycerol-3-phosphate dehydrogenase, anaerobic, C
+ subunit; Region: glycerol3P_GlpC; TIGR03379"
+ /db_xref="CDD:132422"
+ misc_feature complement(<605550..>605774)
+ /gene="glpC"
+ /locus_tag="SARI_00606"
+ /note="The HCP family of iron-sulfur proteins includes
+ hybrid cluster protein (HCP), acetyl-CoA synthase (ACS),
+ and carbon monoxide dehydrogenase (CODH), all of which
+ contain [Fe4-S4] metal clusters at their active sites.
+ These proteins have a conserved...; Region: HCP_like;
+ cl14655"
+ /db_xref="CDD:246686"
+ misc_feature complement(605052..605312)
+ /gene="glpC"
+ /locus_tag="SARI_00606"
+ /note="Cysteine-rich domain; Region: CCG; pfam02754"
+ /db_xref="CDD:202376"
+ misc_feature complement(604668..604922)
+ /gene="glpC"
+ /locus_tag="SARI_00606"
+ /note="Cysteine-rich domain; Region: CCG; pfam02754"
+ /db_xref="CDD:202376"
+ gene complement(605795..607054)
+ /locus_tag="SARI_00607"
+ CDS complement(605795..607054)
+ /locus_tag="SARI_00607"
+ /inference="protein motif:HMMPfam:IPR003953"
+ /inference="protein motif:HMMPIR:IPR009158"
+ /inference="similar to AA sequence:REFSEQ:YP_217275.1"
+ /note="sn-glycerol-3-phosphate dehydrogenase (anaerobic);
+ catalyzes the formation of dihydroxyacetone from glycerol
+ 3-phosphate; part of GlpABC complex; presumably this
+ subunit is responsible for membrane interactions and
+ contains iron-sulfur clusters"
+ /codon_start=1
+ /transl_table=11
+ /product="anaerobic glycerol-3-phosphate dehydrogenase
+ subunit B"
+ /protein_id="YP_001569675.1"
+ /db_xref="GI:161502563"
+ /db_xref="InterPro:IPR003953"
+ /db_xref="InterPro:IPR009158"
+ /translation="MKFDTVIMGGGLAGLLCGLQLQQHGLRCAIVTRGQSALHFSSGS
+ LDMLSALPDGQPVTEITAGLDTLCRQAPEHPYSRLGAQKVLTLAQQAQTLLNASGAQL
+ YGDVQQAHQRVTPLGTLRSTWLSSPEVPVWPLFAQRICVVGVSGLLDFQAHLAAASLR
+ QRDLNVETAEIDLPELDILRDNPTEFRAVNIARLLDNEEKWPLLYDALSPMATNCDMI
+ IMPACFGLANDTLWRWLNERLSCALTLLPTLPPSVLGIRLHNQLQRQFVRQGGIWMPG
+ DEVKKVTCRHGIVSEIWTRNHADIPLRPRFAVLASGSFFSSGLVAEREGIREPILGLD
+ VQQTATRAEWYQQNFFDPQPWQQFGVVTDDAFRPSLAGNTVENLYAIGSVLAGFDPIA
+ QGCGGGVCAVSALQAAHHIAERAGEQQ"
+ misc_feature complement(605798..607054)
+ /locus_tag="SARI_00607"
+ /note="Anaerobic glycerol-3-phosphate dehydrogenase [Amino
+ acid transport and metabolism]; Region: GlpB; COG3075"
+ /db_xref="CDD:225617"
+ misc_feature complement(605807..607054)
+ /locus_tag="SARI_00607"
+ /note="anaerobic glycerol-3-phosphate dehydrogenase
+ subunit B; Validated; Region: PRK05329"
+ /db_xref="CDD:235412"
+ gene complement(607044..608672)
+ /gene="glpA"
+ /locus_tag="SARI_00608"
+ CDS complement(607044..608672)
+ /gene="glpA"
+ /locus_tag="SARI_00608"
+ /inference="protein motif:HMMPfam:IPR006076"
+ /inference="protein motif:HMMPfam:IPR007419"
+ /inference="protein motif:ScanRegExp:IPR000447"
+ /inference="similar to AA sequence:REFSEQ:NP_461226.1"
+ /note="'anaerobic, catalyzes the conversion of glycerol
+ 3-phosphate to dihydroxyacetone using fumarate or nitrate
+ as electron acceptor'"
+ /codon_start=1
+ /transl_table=11
+ /product="sn-glycerol-3-phosphate dehydrogenase subunit A"
+ /protein_id="YP_001569676.1"
+ /db_xref="GI:161502564"
+ /db_xref="InterPro:IPR000447"
+ /db_xref="InterPro:IPR006076"
+ /db_xref="InterPro:IPR007419"
+ /translation="MKTRDSQASDVIIIGGGATGAGIARDCALRGLRVILVERHDIAT
+ GATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTDGLFITLPEDDLA
+ FQATFIRACEAAGIRAEAIDPQQARIIEPSVNPALIGAVKVPDGTVDPFRLTAANMLD
+ AREHSAIVLTAHEVTGLIREGATVCGVHVRNHLTGETQTLHAPVVVNAAGIWGQRIAE
+ YADLSIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSTRIDYN
+ EIDSNRVTADEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIV
+ LFDHAERDGLEGFITITGGKLMTYRLMAEWATDAVCRKLGNARPCITADTALPGSEKS
+ TEHTLKRIISLPAPLRGSAVYRHGDRTPGWLSEDRQHRSLVCECEAVTAGEVQYAVEN
+ LTVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTATQSITQLSEFLNERWKG
+ VQPVAWGDALRESEFTRWVYQGLCGLEKEHQNEI"
+ misc_feature complement(607047..608666)
+ /gene="glpA"
+ /locus_tag="SARI_00608"
+ /note="sn-glycerol-3-phosphate dehydrogenase subunit A;
+ Provisional; Region: glpA; PRK11101"
+ /db_xref="CDD:236847"
+ misc_feature complement(<607995..608582)
+ /gene="glpA"
+ /locus_tag="SARI_00608"
+ /note="hydroxyglutarate oxidase; Provisional; Region:
+ PRK11728"
+ /db_xref="CDD:183292"
+ misc_feature complement(607218..607379)
+ /gene="glpA"
+ /locus_tag="SARI_00608"
+ /note="BFD-like [2Fe-2S] binding domain; Region: Fer2_BFD;
+ pfam04324"
+ /db_xref="CDD:218027"
+ gene 608924..610303
+ /gene="glpT"
+ /locus_tag="SARI_00609"
+ CDS 608924..610303
+ /gene="glpT"
+ /locus_tag="SARI_00609"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="protein motif:HMMTigr:IPR000849"
+ /inference="protein motif:HMMTigr:IPR005267"
+ /inference="protein motif:ScanRegExp:IPR000849"
+ /inference="similar to AA sequence:REFSEQ:NP_461225.1"
+ /note="catalyzes the uptake of glycerol-3-phosphate into
+ the cell with the simultaneous export of inorganic
+ phosphate from the cell"
+ /codon_start=1
+ /transl_table=11
+ /product="sn-glycerol-3-phosphate transporter"
+ /protein_id="YP_001569677.1"
+ /db_xref="GI:161502565"
+ /db_xref="InterPro:IPR000849"
+ /db_xref="InterPro:IPR005267"
+ /db_xref="InterPro:IPR011701"
+ /translation="MGHGGYNMLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFG
+ YAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVF
+ LPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKE
+ RGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWKAALYMPAFGAIVVALFAFAMMRDT
+ PQSCGLPPIEEYKNDYPDDYNEKAEEELTAKQIFMQYVLPNKLLWYIAIANVFVYLLR
+ YGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVF
+ FMTLVTIATIIYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAA
+ GFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLVVVMIGEKRHHD
+ ELQLKRNGG"
+ misc_feature 608945..610300
+ /gene="glpT"
+ /locus_tag="SARI_00609"
+ /note="sn-glycerol-3-phosphate transporter; Provisional;
+ Region: glpT; PRK11273"
+ /db_xref="CDD:236889"
+ misc_feature 609035..610204
+ /gene="glpT"
+ /locus_tag="SARI_00609"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature order(609077..609079,609086..609094,609098..609103,
+ 609149..609151,609158..609163,609170..609172,
+ 609182..609187,609191..609196,609344..609349,
+ 609356..609361,609368..609373,609380..609382,
+ 609416..609421,609428..609433,609449..609451,
+ 609740..609742,609749..609754,609761..609766,
+ 609773..609775,609815..609817,609827..609829,
+ 609839..609841,609848..609850,609860..609862,
+ 610016..610018,610025..610030,610037..610039,
+ 610049..610054,610061..610063,610094..610099,
+ 610106..610111,610118..610123,610130..610132)
+ /gene="glpT"
+ /locus_tag="SARI_00609"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene 610308..611378
+ /gene="glpQ"
+ /locus_tag="SARI_00610"
+ CDS 610308..611378
+ /gene="glpQ"
+ /locus_tag="SARI_00610"
+ /inference="protein motif:HMMPanther:IPR004129"
+ /inference="protein motif:HMMPfam:IPR004129"
+ /inference="similar to AA sequence:INSD:AAL21183.1"
+ /note="hydrolyzes deacylated phospholipids to glycerol
+ 3-phosphate and the corresponding alcohols; periplasmic"
+ /codon_start=1
+ /transl_table=11
+ /product="glycerophosphodiester phosphodiesterase"
+ /protein_id="YP_001569678.1"
+ /db_xref="GI:161502566"
+ /db_xref="InterPro:IPR004129"
+ /translation="MKTTLKNLSVALMLAGMAIGSGAVAAEKVVIAHRGASGYLPEHT
+ LPAKAMAYAQGADYLEQDLVMTKDDHLVVLHDHYLDRVTDVADRFPDRARKDGRYYAI
+ DFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRIHTFEEEIEFVQGLNHSTG
+ KNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKQDNVYLQCFDVAELKRIKHE
+ LEPKMGMDLNLVQLIAYTDWNETQQKQPDGRWVNYNYDWMFKPGAMKQVAEYADGIGP
+ DYHMLVAEGSTKGNIKLTGMAQDAHQNKMVVHPYTVRADQLPDYATDVNQLYDILYNK
+ AGVDGLFTDFPDKAVMFLQKND"
+ misc_feature 610320..611372
+ /gene="glpQ"
+ /locus_tag="SARI_00610"
+ /note="glycerophosphodiester phosphodiesterase;
+ Provisional; Region: glpQ; PRK11143"
+ /db_xref="CDD:236859"
+ misc_feature 610389..611345
+ /gene="glpQ"
+ /locus_tag="SARI_00610"
+ /note="Glycerophosphodiester phosphodiesterase domain of
+ Escherichia coli (GlpQ) and similar proteins; Region:
+ GDPD_EcGlpQ_like; cd08600"
+ /db_xref="CDD:176542"
+ misc_feature order(610404..610406,610485..610487,610491..610493,
+ 610530..610532,610809..610811,610920..610922,
+ 611235..611237)
+ /gene="glpQ"
+ /locus_tag="SARI_00610"
+ /note="active site"
+ /db_xref="CDD:176542"
+ misc_feature order(610404..610406,610530..610532)
+ /gene="glpQ"
+ /locus_tag="SARI_00610"
+ /note="catalytic site [active]"
+ /db_xref="CDD:176542"
+ misc_feature order(610485..610487,610491..610493,610809..610811)
+ /gene="glpQ"
+ /locus_tag="SARI_00610"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:176542"
+ gene complement(611494..612372)
+ /locus_tag="SARI_00611"
+ CDS complement(611494..612372)
+ /locus_tag="SARI_00611"
+ /inference="protein motif:FPrintScan:IPR000847"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="protein motif:HMMPfam:IPR005119"
+ /inference="similar to AA sequence:REFSEQ:NP_461223.1"
+ /note="'KEGG: shn:Shewana3_3435 3.0e-20 transcriptional
+ regulator, LysR family K06022;
+ COG: COG0583 Transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569679.1"
+ /db_xref="GI:161502567"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR005119"
+ /db_xref="InterPro:IPR011991"
+ /translation="MTLTQIHALLAVLEYGGFTEASKRLYMTQSAVSQAISALEDELG
+ VDILIRERRKEIEITAAGSRIVRHLRAIQRDVNAVKEIAEQEKTNPTRTLRIGCFPSA
+ CACILPGVIRYFESHHPNVKIIPYEENSTAIIDSLQDGSIDAGFVPFPVNGMYCVPIY
+ RDKFTVVVPDNHPLATNSTVTVEELMDEPLIVSKGRYELSIMALFKEKGIEPIFKYEF
+ NHPDTALSFIRQGLGIALLPELTLKATAGKLCSVALEPTFYRQISLLAKEPPVEGSPL
+ FLLQKCMATLTDEGLL"
+ misc_feature complement(611578..612372)
+ /locus_tag="SARI_00611"
+ /note="Transcriptional regulator [Transcription]; Region:
+ LysR; COG0583"
+ /db_xref="CDD:223656"
+ misc_feature complement(612187..612366)
+ /locus_tag="SARI_00611"
+ /note="Bacterial regulatory helix-turn-helix protein, lysR
+ family; Region: HTH_1; pfam00126"
+ /db_xref="CDD:215735"
+ misc_feature complement(611581..612096)
+ /locus_tag="SARI_00611"
+ /note="The substrate binding domain of LysR-type
+ transcriptional regulators (LTTRs), a member of the type 2
+ periplasmic binding fold protein superfamily; Region:
+ PBP2_LTTR_substrate; cd05466"
+ /db_xref="CDD:176102"
+ misc_feature complement(order(611683..611688,611692..611697,
+ 611713..611730,611992..612012,612016..612018,
+ 612028..612030,612037..612042,612046..612051))
+ /locus_tag="SARI_00611"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:176102"
+ gene 612534..613724
+ /locus_tag="SARI_00612"
+ CDS 612534..613724
+ /locus_tag="SARI_00612"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="similar to AA sequence:REFSEQ:YP_149898.1"
+ /note="'KEGG: shn:Shewana3_1692 2.4e-07 Xaa-His
+ dipeptidase K01270;
+ COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569680.1"
+ /db_xref="GI:161502568"
+ /db_xref="InterPro:IPR011701"
+ /translation="MKEKLWTKDFWAITVVSFIIFFVFYVLLTLLPIYIADRLHASAD
+ KAGLLVTCFLAAAIVIRPFAGQWVGKYSNKKILVLSSLAFLVITALYPVCHSIESLLF
+ IRVLHGITFGVITTVKGTISARLIPASRRGEGISFFSLAMGLAMVVGPWIGLNMARWN
+ AFTAAFWLCTAVAVLGIVLSLIVTVPPVIRHADGSRPSLGVAAMFDRAALPFALVTFF
+ MTFSYAGVSAFLALYARELDLMAAASNFLLCYAIFLMICRTFTGNVCDRKGPKYVVYP
+ CLLAFTIGLVALGYTNGSIMMIISGGLIGIGYGSVTPVFQTQIISSVEPHKIGVANSL
+ FFNAMDGGMAIGAFIMGMMVEPVGYRMIYVAGAVLVVLAGVLYAAQMKKRGAMPLVSA
+ SELH"
+ misc_feature 612627..613541
+ /locus_tag="SARI_00612"
+ /note="Major Facilitator Superfamily; Region: MFS_1;
+ pfam07690"
+ /db_xref="CDD:219516"
+ misc_feature 612633..613541
+ /locus_tag="SARI_00612"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature order(612681..612683,612690..612695,612702..612704,
+ 612714..612719,612723..612728,612864..612869,
+ 612876..612881,612888..612893,612900..612902,
+ 612936..612941,612948..612953,612969..612971,
+ 613191..613193,613200..613205,613212..613217,
+ 613224..613226,613266..613268,613272..613274,
+ 613284..613286,613293..613295,613305..613307,
+ 613446..613448,613455..613460,613467..613469,
+ 613479..613484,613491..613493,613524..613529,
+ 613536..613541)
+ /locus_tag="SARI_00612"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene complement(613726..613980)
+ /locus_tag="SARI_00613"
+ CDS complement(613726..613980)
+ /locus_tag="SARI_00613"
+ /inference="protein motif:Gene3D:IPR012675"
+ /inference="protein motif:HMMPfam:IPR001041"
+ /inference="protein motif:ScanRegExp:IPR006058"
+ /inference="protein motif:superfamily:IPR001041"
+ /inference="similar to AA sequence:INSD:AAV76587.1"
+ /note="'plays a role in maintenance and possibly the
+ biosynthesis of diferric-tyrosyl radical cofactor,
+ essential for nucleotide reduction catalyzed by
+ ribonucleotide reductases'"
+ /codon_start=1
+ /transl_table=11
+ /product="2Fe-2S ferredoxin YfaE"
+ /protein_id="YP_001569681.1"
+ /db_xref="GI:161502569"
+ /db_xref="InterPro:IPR001041"
+ /db_xref="InterPro:IPR006058"
+ /db_xref="InterPro:IPR012675"
+ /translation="MGRVTLRITGTQLLCQDEHPSLLAALESHDVEVEYQCREGYCGS
+ CRTRLVAGQVDWITEPLAFIQPGEILPCCCRAKGDIEIEM"
+ misc_feature complement(613732..613971)
+ /locus_tag="SARI_00613"
+ /note="Ferredoxin [Energy production and conversion];
+ Region: Fdx; COG0633"
+ /db_xref="CDD:223706"
+ misc_feature complement(613732..613932)
+ /locus_tag="SARI_00613"
+ /note="2Fe-2S iron-sulfur cluster binding domain.
+ Iron-sulfur proteins play an important role in electron
+ transfer processes and in various enzymatic reactions. The
+ family includes plant and algal ferredoxins, which act as
+ electron carriers in photosynthesis...; Region: fer2;
+ cd00207"
+ /db_xref="CDD:238126"
+ misc_feature complement(order(613765..613770,613846..613857,
+ 613861..613863,613870..613872,613879..613884))
+ /locus_tag="SARI_00613"
+ /note="catalytic loop [active]"
+ /db_xref="CDD:238126"
+ misc_feature complement(order(613765..613767,613846..613848,
+ 613855..613857,613870..613872))
+ /locus_tag="SARI_00613"
+ /note="iron binding site [ion binding]; other site"
+ /db_xref="CDD:238126"
+ gene complement(613980..615110)
+ /gene="nrdB"
+ /locus_tag="SARI_00614"
+ CDS complement(613980..615110)
+ /gene="nrdB"
+ /locus_tag="SARI_00614"
+ /inference="protein motif:Gene3D:IPR012348"
+ /inference="protein motif:HMMPfam:IPR000358"
+ /inference="protein motif:ScanRegExp:IPR000358"
+ /inference="protein motif:superfamily:IPR009078"
+ /inference="similar to AA sequence:INSD:AAX66187.1"
+ /note="B2 or R2 protein; type 1a enzyme; catalyzes the
+ rate-limiting step in dNTP synthesis; converts nucleotides
+ to deoxynucleotides; forms a homodimer and then a
+ multimeric complex with NrdA"
+ /codon_start=1
+ /transl_table=11
+ /product="ribonucleotide-diphosphate reductase subunit
+ beta"
+ /protein_id="YP_001569682.1"
+ /db_xref="GI:161502570"
+ /db_xref="InterPro:IPR000358"
+ /db_xref="InterPro:IPR009078"
+ /db_xref="InterPro:IPR012348"
+ /translation="MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQ
+ LSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISI
+ PELETWVETWAFSETIHSRSYTHIIRNIVNDPAVVFDDIVTNEQIQKRAEGISAYYDE
+ LIEMTSYWHLLGVGRHTVNGKTITVNLRELKKKLYLCLMSVNALEAIRFYVSFACSFA
+ FAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGVDDPEMADIAEECKQECYDL
+ FVQAAQQEKEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIP
+ WINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSNFQL"
+ misc_feature complement(614088..615026)
+ /gene="nrdB"
+ /locus_tag="SARI_00614"
+ /note="Ribonucleotide Reductase, R2/beta subunit,
+ ferritin-like diiron-binding domain; Region: RNRR2;
+ cd01049"
+ /db_xref="CDD:153108"
+ misc_feature complement(order(614685..614687,614694..614699,
+ 614739..614741,614748..614750,614757..614762,
+ 614769..614771,614778..614783,614976..614978,
+ 614997..614999))
+ /gene="nrdB"
+ /locus_tag="SARI_00614"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:153108"
+ misc_feature complement(order(614385..614387,614397..614402,
+ 614742..614744,614754..614756,614763..614765,
+ 614856..614858,614964..614966))
+ /gene="nrdB"
+ /locus_tag="SARI_00614"
+ /note="putative radical transfer pathway; other site"
+ /db_xref="CDD:153108"
+ misc_feature complement(order(614385..614387,614394..614396,
+ 614496..614498,614754..614756,614763..614765,
+ 614856..614858))
+ /gene="nrdB"
+ /locus_tag="SARI_00614"
+ /note="diiron center [ion binding]; other site"
+ /db_xref="CDD:153108"
+ misc_feature complement(614742..614744)
+ /gene="nrdB"
+ /locus_tag="SARI_00614"
+ /note="tyrosyl radical; other site"
+ /db_xref="CDD:153108"
+ gene complement(615223..617508)
+ /locus_tag="SARI_00615"
+ CDS complement(615223..617508)
+ /locus_tag="SARI_00615"
+ /inference="protein motif:HMMPanther:IPR000788"
+ /inference="protein motif:HMMPfam:IPR000788"
+ /inference="protein motif:HMMPfam:IPR005144"
+ /inference="protein motif:HMMPfam:IPR013509"
+ /inference="protein motif:HMMTigr:IPR013346"
+ /inference="protein motif:ScanRegExp:IPR000788"
+ /inference="protein motif:superfamily:IPR008926"
+ /note="Catalyzes the rate-limiting step in dNTP synthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="ribonucleotide-diphosphate reductase subunit
+ alpha"
+ /protein_id="YP_001569683.1"
+ /db_xref="GI:161502571"
+ /db_xref="InterPro:IPR000788"
+ /db_xref="InterPro:IPR005144"
+ /db_xref="InterPro:IPR008926"
+ /db_xref="InterPro:IPR013346"
+ /db_xref="InterPro:IPR013509"
+ /translation="MNQSLLVTKRDGRTERINLDKIHRVLDWAAEGLNNVSVSQVELR
+ SHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAFGQFEPPAL
+ YRHVVKMVELGKYDNHLLEDYTEEEFKQMDSFIVHDRDMTFSYAAVKQLEGKYLVQNR
+ VTGEIYESAQFLYILVAACLFSNYPRETRLDYVKRFYDAVSTFKISLPTPIMSGVRTP
+ TRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHT
+ GCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMD
+ YGVQINKLMYTRLLKGGDITLFSPSDVPGLYDAFFADQDEFERLYVKYENDDSIRKQR
+ VKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPVVAPVRQSNLCLEIALPTKPLH
+ DVNDENGEIALCTLSAFNLGAIKTLDELEELAILAVRALDALLDYQDYPIPAAKRGAM
+ GRRTLGIGVINFAYWLAKNGKRYSDGSANNLTHKTFEAIQYYLLKASNGLAKEQGACP
+ WFNETTYAKGVLPIDTYKKDLDAIANEPLHYDWEQLRESIKTHGLRNSTLSALMPSET
+ SSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLKDAYELLWEMPNNDGYLQLV
+ GIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAED
+ AQDDLVPSIQDDGCESGACKI"
+ misc_feature complement(615226..617499)
+ /locus_tag="SARI_00615"
+ /note="ribonucleotide-diphosphate reductase subunit alpha;
+ Validated; Region: PRK09103"
+ /db_xref="CDD:181649"
+ misc_feature complement(617233..617496)
+ /locus_tag="SARI_00615"
+ /note="ATP cone domain; Region: ATP-cone; pfam03477"
+ /db_xref="CDD:217585"
+ misc_feature complement(615307..617004)
+ /locus_tag="SARI_00615"
+ /note="Class I ribonucleotide reductase; Region: RNR_I;
+ cd01679"
+ /db_xref="CDD:153088"
+ misc_feature complement(order(615634..615651,616117..616119,
+ 616186..616188,616192..616194,616198..616200,
+ 616750..616752,616834..616839,616879..616884))
+ /locus_tag="SARI_00615"
+ /note="active site"
+ /db_xref="CDD:153088"
+ misc_feature complement(order(616624..616638,616645..616650,
+ 616657..616662,616666..616671,616681..616683,
+ 616717..616719,616762..616764,616771..616776,
+ 616783..616788,616795..616797,616804..616809,
+ 616846..616848))
+ /locus_tag="SARI_00615"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:153088"
+ misc_feature complement(order(615316..615321,616123..616125,
+ 616186..616188,616192..616194,616198..616200,
+ 616834..616836))
+ /locus_tag="SARI_00615"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:153088"
+ misc_feature complement(order(616666..616668,616681..616683,
+ 616723..616725,616762..616764,616798..616800,
+ 616807..616815))
+ /locus_tag="SARI_00615"
+ /note="effector binding site; other site"
+ /db_xref="CDD:153088"
+ misc_feature complement(order(615340..615345,615349..615354,
+ 615364..615369,615373..615381,616288..616290,
+ 616309..616311,616462..616470,616474..616479,
+ 616486..616488))
+ /locus_tag="SARI_00615"
+ /note="R2 peptide binding site; other site"
+ /db_xref="CDD:153088"
+ gene complement(617866..618594)
+ /locus_tag="SARI_00616"
+ CDS complement(617866..618594)
+ /locus_tag="SARI_00616"
+ /inference="protein motif:HMMPfam:IPR013216"
+ /inference="protein motif:HMMTigr:IPR010233"
+ /inference="similar to AA sequence:REFSEQ:NP_461218.1"
+ /note="Involved in ubiquinone biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="3-demethylubiquinone-9 3-methyltransferase"
+ /protein_id="YP_001569684.1"
+ /db_xref="GI:161502572"
+ /db_xref="InterPro:IPR010233"
+ /db_xref="InterPro:IPR013216"
+ /translation="MNAEKAPERHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLR
+ LGYIAERSGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVARLHALESG
+ IEVEYVQETVEEHAAKHAQQYDVVTCMEMLEHVPDPQSVVHACAQLVKPGGEVFFSTL
+ NRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLSWVDETILKEQHITGLHYNP
+ ITNTFKLGPGVDVNYMLHTRAKKA"
+ misc_feature complement(617872..618570)
+ /locus_tag="SARI_00616"
+ /note="bifunctional 3-demethylubiquinone-9
+ 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol
+ methylase; Provisional; Region: PRK05134"
+ /db_xref="CDD:235350"
+ misc_feature complement(618121..618420)
+ /locus_tag="SARI_00616"
+ /note="S-adenosylmethionine-dependent methyltransferases
+ (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
+ that use S-adenosyl-L-methionine (SAM or AdoMet) as a
+ substrate for methyltransfer, creating the product
+ S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
+ cd02440"
+ /db_xref="CDD:100107"
+ misc_feature complement(order(618208..618210,618259..618267,
+ 618337..618342,618388..618408))
+ /locus_tag="SARI_00616"
+ /note="S-adenosylmethionine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:100107"
+ gene 618741..621377
+ /locus_tag="SARI_00617"
+ CDS 618741..621377
+ /locus_tag="SARI_00617"
+ /inference="protein motif:BlastProDom:IPR002205"
+ /inference="protein motif:Gene3D:IPR013758"
+ /inference="protein motif:HMMPfam:IPR002205"
+ /inference="protein motif:HMMPfam:IPR006691"
+ /inference="protein motif:HMMSmart:IPR002205"
+ /inference="protein motif:HMMTigr:IPR005743"
+ /inference="protein motif:superfamily:IPR013760"
+ /note="negatively supercoils closed circular
+ double-stranded DNA"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA gyrase subunit A"
+ /protein_id="YP_001569685.1"
+ /db_xref="GI:161502573"
+ /db_xref="InterPro:IPR002205"
+ /db_xref="InterPro:IPR005743"
+ /db_xref="InterPro:IPR006691"
+ /db_xref="InterPro:IPR013758"
+ /db_xref="InterPro:IPR013760"
+ /translation="MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPV
+ HRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYML
+ VDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMP
+ TKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDNEDISIEGLMEHIPGPDFP
+ TAAIINGRRGIEEAYRTGRGKVYIRARAEVETDAKTGRETIIVHEIPYQVNKARLIEK
+ IAELVKDKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINM
+ VALHHGQPKIMNLKDIISAFVRHRREVVTRRTIFELRKARDRAHILEALAIALANIDP
+ IIEMIRRAPTPAEAKAALISRPWDLGNVAAMLERAGDDAARPEWLEPEFGVRDGQYYL
+ TEQQAQAILDLRLQKLTGLEHEKLLDEYKELLEQIAELLHILGSADRLMEVIREEMEL
+ IRDQFGDERRTEITANSADINIEDLISQEDVVVTLSHQGYVKYQPLTDYEAQRRGGKG
+ KSAARIKEEDFIDRLLVANTHDTILCFSSRGRLYWMKVYQLPEASRGARGRPIVNLLP
+ LEANERITAILPVREYEEGVNVFMATASGTVKKTALTEFSRPRSAGIIAVNLNEGDEL
+ IGVDLTSGSDEVMLFSAAGKVVRFKEDAVRAMGRTATGVRGIKLAGDDKVVSLIIPRG
+ EGAILTVTQNGYGKRTAADEYPTKSRATQGVISIKVTERNGSVVGAVQVDDCDQIMMI
+ TDAGTLVRTRVSEISVVGRNTQGVILIRTAEDENVVGLQRVAEPVDDEELDAIDGSVA
+ EGDEDIAPEAESDDDVADDADE"
+ misc_feature 618759..621266
+ /locus_tag="SARI_00617"
+ /note="DNA gyrase subunit A; Validated; Region: PRK05560"
+ /db_xref="CDD:235502"
+ misc_feature 618828..620261
+ /locus_tag="SARI_00617"
+ /note="DNA Topoisomerase, subtype IIA; domain A';
+ bacterial DNA topoisomerase IV (C subunit, ParC),
+ bacterial DNA gyrases (A subunit, GyrA),mammalian DNA
+ toposiomerases II. DNA topoisomerases are essential
+ enzymes that regulate the conformational changes...;
+ Region: TOP4c; cd00187"
+ /db_xref="CDD:238111"
+ misc_feature order(618828..618911,618924..619073,619077..619133,
+ 619137..619208,619215..619217)
+ /locus_tag="SARI_00617"
+ /note="CAP-like domain; other site"
+ /db_xref="CDD:238111"
+ misc_feature 619104..619106
+ /locus_tag="SARI_00617"
+ /note="active site"
+ /db_xref="CDD:238111"
+ misc_feature order(619902..619910,619917..619928,619959..619964,
+ 620106..620156)
+ /locus_tag="SARI_00617"
+ /note="primary dimer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:238111"
+ misc_feature 620352..620495
+ /locus_tag="SARI_00617"
+ /note="DNA gyrase C-terminal domain, beta-propeller;
+ Region: DNA_gyraseA_C; pfam03989"
+ /db_xref="CDD:217832"
+ misc_feature 620502..620654
+ /locus_tag="SARI_00617"
+ /note="DNA gyrase C-terminal domain, beta-propeller;
+ Region: DNA_gyraseA_C; pfam03989"
+ /db_xref="CDD:217832"
+ misc_feature 620673..620807
+ /locus_tag="SARI_00617"
+ /note="DNA gyrase C-terminal domain, beta-propeller;
+ Region: DNA_gyraseA_C; pfam03989"
+ /db_xref="CDD:217832"
+ misc_feature 620814..620951
+ /locus_tag="SARI_00617"
+ /note="DNA gyrase C-terminal domain, beta-propeller;
+ Region: DNA_gyraseA_C; pfam03989"
+ /db_xref="CDD:217832"
+ misc_feature 620970..621110
+ /locus_tag="SARI_00617"
+ /note="DNA gyrase C-terminal domain, beta-propeller;
+ Region: DNA_gyraseA_C; pfam03989"
+ /db_xref="CDD:217832"
+ misc_feature 621117..621257
+ /locus_tag="SARI_00617"
+ /note="DNA gyrase C-terminal domain, beta-propeller;
+ Region: DNA_gyraseA_C; pfam03989"
+ /db_xref="CDD:217832"
+ gene 621556..624342
+ /locus_tag="SARI_00618"
+ CDS 621556..624342
+ /locus_tag="SARI_00618"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:Gene3D:IPR003594"
+ /inference="protein motif:HMMPfam:IPR001789"
+ /inference="protein motif:HMMPfam:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003661"
+ /inference="protein motif:HMMSmart:IPR001789"
+ /inference="protein motif:HMMSmart:IPR003594"
+ /inference="protein motif:HMMSmart:IPR003661"
+ /inference="protein motif:superfamily:IPR003594"
+ /inference="protein motif:superfamily:IPR009082"
+ /inference="protein motif:superfamily:IPR011006"
+ /note="'KEGG: sec:SC2274 0. rcsC; sensory histidine kinase
+ in two-component regulatory system with RcsB, regulates
+ colanic capsule biosynthesis K07677;
+ COG: COG0784 FOG: CheY-like receiver;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hybrid sensory kinase in two-component
+ regulatory system with RcsB and YojN"
+ /protein_id="YP_001569686.1"
+ /db_xref="GI:161502574"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR003594"
+ /db_xref="InterPro:IPR003661"
+ /db_xref="InterPro:IPR009082"
+ /db_xref="InterPro:IPR011006"
+ /translation="MALLIWLLIAFASVFYIVNALHQRESEIRQEFNLSSDQAQRFIQ
+ RTSDVMKELKYIAENRLTAENGVMSSRARDDKVVVPDFEPLFADSDCAAMGADWRGSL
+ ESLAWFMRYWRDNFSAAYDLNRVFLIGSDNLCMANFGLREMPVERDDALKALHERIMK
+ YRNASQEESGNNLFWISQGARQGVGYFYALTPVYLANRLQALLGVEQSIRMENFFTPG
+ SLPMGVTIIDENGHSLISLTGPDGNIKAEPRWMQERSWFGYTPGFRELVLKKSLPPSS
+ LSIVYSVPVDLVLERIRILILNAILLNVLVGAGLFTLARMYERRIFIPAESDAQRLEE
+ HEQFNRKIVASAPVGICILRTIDGVNILSNELAHTYLNMLTHEDRQRLAQIICGQQVN
+ FVDVLTSNNTNLQISFVHSRYRNENVAICVLVDVSTRVKMEESLQEMAQAAEQASQSK
+ SMFLATVSHELRTPLYGIIGNLDLLQTKELPKGVDRLVTAMNNSSSLLLKIISDILDF
+ SKIESEQLKIEPREFSPREVMNHITANYLPLVVRKQLGLYCFIEPDVPVSLNGDPMRL
+ QQVISNLLSNAIKFTDIGCIVLHVRCDGDYLSISVRDTGVGIPAKEVVRLFDPFFQVG
+ TGVQRNFQGTGLGLAICEKLISMMDGDISVDSEPGMGSQFTLRIPLYGAQYPVKKGME
+ GLAGTCCWLAVRNTSLCQFIETTLARSGVHTQRYEGQKPAADDILIVDDVLEHTWQGR
+ AAVIFCRRHIGISLERAPGEWVHSVALVHELPALLARIYSIELDSEALSTALPPADKT
+ ADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNPVDIVLSDV
+ NMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTLDVLKQ
+ TLAVYAERVRKTRT"
+ misc_feature 621565..624336
+ /locus_tag="SARI_00618"
+ /note="hybrid sensory kinase in two-component regulatory
+ system with RcsB and YojN; Provisional; Region: PRK10841"
+ /db_xref="CDD:182772"
+ misc_feature 622912..>623013
+ /locus_tag="SARI_00618"
+ /note="Histidine Kinase A (dimerization/phosphoacceptor)
+ domain; Histidine Kinase A dimers are formed through
+ parallel association of 2 domains creating 4-helix
+ bundles; usually these domains contain a conserved His
+ residue and are activated via...; Region: HisKA; cd00082"
+ /db_xref="CDD:119399"
+ misc_feature order(622912..622914,622924..622926,622936..622938,
+ 622945..622947,622957..622959,622966..622968)
+ /locus_tag="SARI_00618"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119399"
+ misc_feature 622930..622932
+ /locus_tag="SARI_00618"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:119399"
+ misc_feature 623251..623559
+ /locus_tag="SARI_00618"
+ /note="Histidine kinase-like ATPases; This family includes
+ several ATP-binding proteins for example: histidine
+ kinase, DNA gyrase B, topoisomerases, heat shock protein
+ HSP90, phytochrome-like ATPases and DNA mismatch repair
+ proteins; Region: HATPase_c; cd00075"
+ /db_xref="CDD:238030"
+ misc_feature order(623269..623271,623281..623283,623290..623292,
+ 623356..623358,623362..623364,623368..623370,
+ 623374..623379,623458..623469,623515..623517,
+ 623521..623523,623536..623541,623545..623547)
+ /locus_tag="SARI_00618"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature 623281..623283
+ /locus_tag="SARI_00618"
+ /note="Mg2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature order(623368..623370,623374..623376,623458..623460,
+ 623464..623466)
+ /locus_tag="SARI_00618"
+ /note="G-X-G motif; other site"
+ /db_xref="CDD:238030"
+ misc_feature 623617..623892
+ /locus_tag="SARI_00618"
+ /note="RcsC Alpha-Beta-Loop (ABL); Region: RcsC;
+ pfam09456"
+ /db_xref="CDD:150207"
+ misc_feature 623977..624315
+ /locus_tag="SARI_00618"
+ /note="Signal receiver domain; originally thought to be
+ unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
+ recently identified in eukaroytes ETR1 Arabidopsis
+ thaliana; this domain receives the signal from the sensor
+ partner in a two-component systems; Region: REC; cd00156"
+ /db_xref="CDD:238088"
+ misc_feature order(623986..623991,624118..624120,624142..624144,
+ 624202..624204,624259..624261,624268..624273)
+ /locus_tag="SARI_00618"
+ /note="active site"
+ /db_xref="CDD:238088"
+ misc_feature 624118..624120
+ /locus_tag="SARI_00618"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238088"
+ misc_feature order(624127..624132,624136..624144)
+ /locus_tag="SARI_00618"
+ /note="intermolecular recognition site; other site"
+ /db_xref="CDD:238088"
+ misc_feature 624268..624276
+ /locus_tag="SARI_00618"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238088"
+ gene complement(624444..625094)
+ /locus_tag="SARI_00619"
+ CDS complement(624444..625094)
+ /locus_tag="SARI_00619"
+ /inference="protein motif:BlastProDom:IPR000792"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:FPrintScan:IPR000792"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000792"
+ /inference="protein motif:HMMPfam:IPR001789"
+ /inference="protein motif:HMMSmart:IPR000792"
+ /inference="protein motif:HMMSmart:IPR001789"
+ /inference="protein motif:ScanRegExp:IPR000792"
+ /inference="protein motif:superfamily:IPR011006"
+ /inference="similar to AA sequence:REFSEQ:YP_149908.1"
+ /note="two-component response regulator RscB regulates the
+ genes involved in capsule biosynthesis and cell division;
+ probably phosphorylated by RcsC or RcsF"
+ /codon_start=1
+ /transl_table=11
+ /product="transcriptional regulator RcsB"
+ /protein_id="YP_001569687.1"
+ /db_xref="GI:161502575"
+ /db_xref="InterPro:IPR000792"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR011006"
+ /db_xref="InterPro:IPR011991"
+ /translation="MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINN
+ LPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLD
+ IEGIVLKQGAPTDLPKALAALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLR
+ LFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPTDKE"
+ misc_feature complement(624447..625094)
+ /locus_tag="SARI_00619"
+ /note="transcriptional regulator RcsB; Provisional;
+ Region: PRK10840"
+ /db_xref="CDD:182771"
+ misc_feature complement(624726..625076)
+ /locus_tag="SARI_00619"
+ /note="Signal receiver domain; originally thought to be
+ unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
+ recently identified in eukaroytes ETR1 Arabidopsis
+ thaliana; this domain receives the signal from the sensor
+ partner in a two-component systems; Region: REC; cd00156"
+ /db_xref="CDD:238088"
+ misc_feature complement(order(624765..624770,624777..624779,
+ 624834..624836,624894..624896,624927..624929,
+ 625062..625067))
+ /locus_tag="SARI_00619"
+ /note="active site"
+ /db_xref="CDD:238088"
+ misc_feature complement(624927..624929)
+ /locus_tag="SARI_00619"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238088"
+ misc_feature complement(order(624894..624902,624915..624920))
+ /locus_tag="SARI_00619"
+ /note="intermolecular recognition site; other site"
+ /db_xref="CDD:238088"
+ misc_feature complement(624762..624770)
+ /locus_tag="SARI_00619"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238088"
+ misc_feature complement(624483..624644)
+ /locus_tag="SARI_00619"
+ /note="C-terminal DNA-binding domain of LuxR-like
+ proteins. This domain contains a helix-turn-helix motif
+ and binds DNA. Proteins belonging to this group are
+ response regulators; some act as transcriptional
+ activators, others as transcriptional repressors. Many...;
+ Region: LuxR_C_like; cd06170"
+ /db_xref="CDD:99777"
+ misc_feature complement(order(624501..624503,624534..624548,
+ 624552..624557,624561..624566,624588..624596,
+ 624633..624641))
+ /locus_tag="SARI_00619"
+ /note="DNA binding residues [nucleotide binding]"
+ /db_xref="CDD:99777"
+ misc_feature complement(order(624486..624488,624495..624503,
+ 624594..624596,624600..624602,624606..624608))
+ /locus_tag="SARI_00619"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99777"
+ gene complement(625114..627779)
+ /locus_tag="SARI_00620"
+ /note="Pseudogene compared to gi|16765596|ref|NP_461211.1|
+ putative sensor kinase [Salmonella typhimurium LT2]"
+ gene complement(628081..628174)
+ /locus_tag="SARI_00621"
+ ncRNA complement(628081..628174)
+ /locus_tag="SARI_00621"
+ /ncRNA_class="antisense_RNA"
+ /product="MicF RNA"
+ /inference="nucleotide motif:Rfam:RF00033"
+ /note="Rfam score 100.18"
+ gene 628507..629643
+ /locus_tag="SARI_00622"
+ CDS 628507..629643
+ /locus_tag="SARI_00622"
+ /inference="protein motif:FPrintScan:IPR001702"
+ /inference="protein motif:FPrintScan:IPR001897"
+ /inference="protein motif:HMMPfam:IPR001702"
+ /inference="protein motif:ScanRegExp:IPR013793"
+ /inference="protein motif:superfamily:IPR011050"
+ /inference="similar to AA sequence:INSD:AAV76598.1"
+ /note="allows for ions and hydrophilic solutes to cross
+ the outer membrane"
+ /codon_start=1
+ /transl_table=11
+ /product="outer membrane porin protein C"
+ /protein_id="YP_001569688.1"
+ /db_xref="GI:161502576"
+ /db_xref="InterPro:IPR001702"
+ /db_xref="InterPro:IPR001897"
+ /db_xref="InterPro:IPR011050"
+ /db_xref="InterPro:IPR013793"
+ /translation="MKVKVLSLLVPALLVAGAANAAEIYNKDGNKLDLFGKVDGLHYF
+ SDDKGSDGDQTYMRIGFKGETQVNDQLTGYGQWEYQIQGNQTEGSNDAWTRVAFAGLK
+ FADAGSFDYGRNYGVTYDVTSWTDVLPEFGGDTYGADNFMQQRGNGYATYRNTDFFGL
+ VDGLDFALQYQGKNGSVSGENTSGRSLLNQNGDGYGGSLTYAIGEGFSVGGAITTSKR
+ TADQNNTANAHLYGNGDRATVYTGGLKYDANNIYLAAQYSQTYNATRFGTSNGSNPST
+ SYGFANKAQNFEVVAQYQFDFGLRPSVAYLQSKGKDISNGYGASYGDQDIVKYVDVGA
+ TYYFNKNMSTYVDYKINLLDKNDFTRDAGINTDDIVALGLVYQF"
+ misc_feature 628573..629640
+ /locus_tag="SARI_00622"
+ /note="Outer membrane protein (porin) [Cell envelope
+ biogenesis, outer membrane]; Region: OmpC; COG3203"
+ /db_xref="CDD:225744"
+ misc_feature 628594..629640
+ /locus_tag="SARI_00622"
+ /note="Porins form aqueous channels for the diffusion of
+ small hydrophillic molecules across the outer membrane.
+ Individual 16-strand anti-parallel beta-barrels form a
+ central pore, and trimerizes thru mainly hydrophobic
+ interactions at the interface. Trimers...; Region:
+ gram_neg_porins; cd00342"
+ /db_xref="CDD:238208"
+ misc_feature order(628594..628596,628600..628602,628618..628620,
+ 628624..628632,628693..628707,628723..628725,
+ 628729..628737,628741..628743,628747..628758,
+ 628786..628791,628795..628809,628837..628845,
+ 628939..628941,628945..628950,629518..629523,
+ 629530..629532,629626..629628,629632..629634,
+ 629638..629640)
+ /locus_tag="SARI_00622"
+ /note="trimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238208"
+ misc_feature order(628615..628617,628678..628680,628789..628791,
+ 628882..628884,628939..628941)
+ /locus_tag="SARI_00622"
+ /note="eyelet of channel; other site"
+ /db_xref="CDD:238208"
+ gene 629760..630812
+ /locus_tag="SARI_00623"
+ CDS 629760..630812
+ /locus_tag="SARI_00623"
+ /inference="protein motif:HMMPfam:IPR003374"
+ /inference="similar to AA sequence:SwissProt:P41780"
+ /note="catalyzes the conversion of aminoimidazole ribotide
+ to the 4-amino-5-hydroxymethyl-2-methyl pyrimidine moiety
+ of thiamine; involved in the maintenance and/or assembly
+ of sulfur clusters; periplasmic lipoporotein anchored to
+ the inner membrane; part of the thiamine pyrophosphate
+ biosynthesis pathway"
+ /codon_start=1
+ /transl_table=11
+ /product="thiamine biosynthesis lipoprotein ApbE"
+ /protein_id="YP_001569689.1"
+ /db_xref="GI:161502577"
+ /db_xref="InterPro:IPR003374"
+ /translation="MKMTFCRAVLMATAFLFMGCDDASQTTTTSPDAQVLEGKTMGTF
+ WRVSVVGIDAKRAVELRTKIQTQLDADDRLLSTYKKDSALMRFNHSRSLALWPVSEAM
+ ADIVTSALRIGAKTNGAMDITVGPLVNLWGFGPERQPLHIPTQVQIDAAKAKTGLQHL
+ QVIDRAGHQFLQKDLPDLYVDLSTVGEGYAADHLARLMEQEGIARYLVSVGGALSSRG
+ MNAQGQPWRVAIQKPTDRENAVQAIVDINGHGISTSGSYRNYYELDGKRVSHVIDPQT
+ GRPIEHNLVSVTVIAPTALEADGWDTGLMVLGTKKAKEVVRREGLAVFMIMKEGEGFT
+ TWMSPQFKTFLVSDKN"
+ misc_feature 629760..630806
+ /locus_tag="SARI_00623"
+ /note="thiamine biosynthesis lipoprotein ApbE;
+ Provisional; Region: PRK10461"
+ /db_xref="CDD:182478"
+ misc_feature 629961..630737
+ /locus_tag="SARI_00623"
+ /note="ApbE family; Region: ApbE; pfam02424"
+ /db_xref="CDD:217027"
+ gene 630881..631954
+ /locus_tag="SARI_00624"
+ CDS 630881..631954
+ /locus_tag="SARI_00624"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000005"
+ /inference="protein motif:HMMPfam:IPR001497"
+ /inference="protein motif:HMMPfam:IPR004026"
+ /inference="protein motif:HMMPfam:IPR008332"
+ /inference="protein motif:HMMSmart:IPR000005"
+ /inference="protein motif:HMMTigr:IPR001497"
+ /inference="protein motif:ScanRegExp:IPR000005"
+ /inference="protein motif:ScanRegExp:IPR001497"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:REFSEQ:YP_149912.1"
+ /note="'KEGG: spt:SPA0599 1.1e-180 ada; ADA regulatory
+ protein K00567;
+ COG: COG0350 Methylated DNA-protein cysteine
+ methyltransferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569690.1"
+ /db_xref="GI:161502578"
+ /db_xref="InterPro:IPR000005"
+ /db_xref="InterPro:IPR001497"
+ /db_xref="InterPro:IPR004026"
+ /db_xref="InterPro:IPR008332"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR011991"
+ /translation="MKESMMKKALLTDDECWQRVQARDASADGCFVFAVRTTGIFCRP
+ SCRSKRALRKNVRFFANAQQALDAGFRPCKRCQPDDARAQRRQLDKIACACRLLEQET
+ PVTLASLAQAVAMSPFHLHRLFKASTGMTPKGWQQAWRARRLREALAKGERVTAAIYR
+ AGFPDSSSYYRHADQTLGMTAKQFRKGGDNVSVRYALTDWIYGRCLVAESERGICAIL
+ PGDSDDALLAELHTLFPAARHEPADVRFQQRVQQVVAAINTRDVLLSLPLDIQGTAFQ
+ QQVWQALRAIPCGETVSYQQLAARIGKPTAVRAVASACGANKLAMVIPCHRVVGRDGA
+ LSGYRWGVSRKAQLLKREAQKEE"
+ misc_feature 630893..631951
+ /locus_tag="SARI_00624"
+ /note="bifunctional DNA-binding transcriptional dual
+ regulator/O6-methylguanine-DNA methyltransferase;
+ Provisional; Region: PRK15435"
+ /db_xref="CDD:185333"
+ misc_feature 630920..631117
+ /locus_tag="SARI_00624"
+ /note="Metal binding domain of Ada; Region:
+ Ada_Zn_binding; pfam02805"
+ /db_xref="CDD:145780"
+ misc_feature 631181..631279
+ /locus_tag="SARI_00624"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ misc_feature 631454..631690
+ /locus_tag="SARI_00624"
+ /note="6-O-methylguanine DNA methyltransferase,
+ ribonuclease-like domain; Region: Methyltransf_1N;
+ pfam02870"
+ /db_xref="CDD:217259"
+ misc_feature 631703..631936
+ /locus_tag="SARI_00624"
+ /note="The DNA repair protein O6-alkylguanine-DNA
+ alkyltransferase (ATase; also known as AGT, AGAT and MGMT)
+ reverses O6-alkylation DNA damage by transferring O6-alkyl
+ adducts to an active site cysteine irreversibly, without
+ inducing DNA strand breaks. ATases...; Region: ATase;
+ cd06445"
+ /db_xref="CDD:119438"
+ misc_feature order(631703..631708,631760..631765,631787..631789,
+ 631796..631798,631802..631807,631811..631813,
+ 631820..631825,631829..631831,631853..631855,
+ 631868..631870,631889..631891)
+ /locus_tag="SARI_00624"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:119438"
+ misc_feature order(631760..631762,631853..631858,631862..631864,
+ 631934..631936)
+ /locus_tag="SARI_00624"
+ /note="active site"
+ /db_xref="CDD:119438"
+ gene 631957..632607
+ /locus_tag="SARI_00625"
+ CDS 631957..632607
+ /locus_tag="SARI_00625"
+ /inference="protein motif:HMMPfam:IPR005123"
+ /inference="similar to AA sequence:REFSEQ:YP_149913.1"
+ /note="'COG: COG3145 Alkylated DNA repair protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569691.1"
+ /db_xref="GI:161502579"
+ /db_xref="InterPro:IPR005123"
+ /translation="MLDLFADEEPWQESLAPGAVVLRRFAFRAAQSLLDEIRFVASQS
+ PFRQMVTPGGYTMSVAMTNCGELGWTTNRHGYCYSERDPLTDKPWPALPLSFASVCRQ
+ AALAAGYENFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGVPAVFQFGGLH
+ RSDPLQRILLEHGDIVVWGSESRLFYHGIQTLKAGFHPMTGEFRYNLTFRQAAEKE"
+ misc_feature 631957..632592
+ /locus_tag="SARI_00625"
+ /note="alpha-ketoglutarate-dependent dioxygenase AlkB;
+ Provisional; Region: PRK15401"
+ /db_xref="CDD:237957"
+ gene 632683..634377
+ /locus_tag="SARI_00626"
+ CDS 632683..634377
+ /locus_tag="SARI_00626"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR005898"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:REFSEQ:NP_461206.1"
+ /note="efflux pump for the antibacterial peptide microcin
+ J25"
+ /codon_start=1
+ /transl_table=11
+ /product="multidrug transporter membrane
+ component/ATP-binding component"
+ /protein_id="YP_001569692.1"
+ /db_xref="GI:161502580"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR005898"
+ /translation="MELLILVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIETV
+ DTTVMVLPEFLGLLLLLMAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQL
+ GSASLLAGLTSDIRNITIAFVRLPELVQGIILTVGSAVYLAMLSTKMLLVTTVWMTIT
+ IWGGFVLVARVYRHMATLRETEDKLYNDYQTVLEGRKELTLNRERAEQIFKQCYTPDA
+ KEYRHHIIRADTFHLSAVNWSNIMMLGAIGLVFWMANSLGWADTNVAATYSLTLLFLR
+ TPLLSAVGALPTLLAAQVAFNKLNKFALAPYKPDFPQPKAFPGWQTLELRNVVFHYQD
+ NAFSVGPINLTIHCGELLFLIGGNGSGKSTLAMLLTGLYQPQSGAILLDGQPIAAGQP
+ EDYRKLFSAVFTDVWLFDRLLGPQGKPANPALVDKWLEHLKMTHKLELNDGRILNLNL
+ SKGQKKRIALLLALAEERDIILLDEWAADQDPHFRREFYQVLLPLMQKMGKTIFAISH
+ DDHYFIHADRLLEMRNGQLTELTGEERDAASRDAVARTATMAPDERPDKQSAIRHG"
+ misc_feature 632683..634323
+ /locus_tag="SARI_00626"
+ /note="multidrug transporter membrane
+ component/ATP-binding component; Provisional; Region:
+ PRK10522"
+ /db_xref="CDD:236707"
+ misc_feature 633649..634260
+ /locus_tag="SARI_00626"
+ /note="ATP-binding cassette domain of multidrug resistance
+ protein-like transporters; Region: ABCC_MRP_Like; cd03228"
+ /db_xref="CDD:213195"
+ misc_feature 633748..633771
+ /locus_tag="SARI_00626"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213195"
+ misc_feature order(633757..633762,633766..633774,633892..633894,
+ 634102..634107,634204..634206)
+ /locus_tag="SARI_00626"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213195"
+ misc_feature 633883..633894
+ /locus_tag="SARI_00626"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213195"
+ misc_feature 634030..634059
+ /locus_tag="SARI_00626"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213195"
+ misc_feature 634090..634107
+ /locus_tag="SARI_00626"
+ /note="Walker B; other site"
+ /db_xref="CDD:213195"
+ misc_feature 634114..634125
+ /locus_tag="SARI_00626"
+ /note="D-loop; other site"
+ /db_xref="CDD:213195"
+ misc_feature 634192..634212
+ /locus_tag="SARI_00626"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213195"
+ gene complement(634394..635641)
+ /locus_tag="SARI_00627"
+ CDS complement(634394..635641)
+ /locus_tag="SARI_00627"
+ /inference="protein motif:HMMPfam:IPR011547"
+ /inference="similar to AA sequence:INSD:ABP61454.1"
+ /note="'KEGG: hpa:HPAG1_0231 8.7e-62 putative sulfate
+ permease K01672;
+ COG: COG0659 Sulfate permease and related transporters
+ (MFS superfamily);
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569693.1"
+ /db_xref="GI:161502581"
+ /db_xref="InterPro:IPR011547"
+ /translation="MSATSFPSTTATEYAVSRVIRSPRLLVRETLAGVLTALALIPEV
+ ISFSVIAGVDPKVSLIASVVLCLAMSVLGGRPAMVTAAAGSVALVIGPMVSQHGVQYI
+ LPAVVLAGVIQILFGVLGMARLMRFIPAAVMTGFVNALGILIFFAQVPHFWSKSPLIW
+ GLFVLTLLIVLWAPRVIKSIPAPLIAIVLLTVFTATTGQLLPTVGDEGPMSRGLPGLT
+ LLSVPLNWQTLAIIWPCALSIAFVGLMESLLTAKLVDDLTATPSNKKRESAGLGIANI
+ LAGFYGGIAGCAMIGQTIVNVEMGKGRSRVSTLAAGVVLLLLVTALSEVMAKIPMAVL
+ AGIMAIVAVKTFSWHSIQPATLTRLPIAETLVMLVTVAATVYTANLAIGVVAGVIAML
+ LLPRIVRQKNAVTAEIPSPAPEK"
+ misc_feature complement(<634580..635578)
+ /locus_tag="SARI_00627"
+ /note="Sulfate permease and related transporters (MFS
+ superfamily) [Inorganic ion transport and metabolism];
+ Region: SUL1; COG0659"
+ /db_xref="CDD:223732"
+ misc_feature complement(635360..635578)
+ /locus_tag="SARI_00627"
+ /note="Sulfate transporter N-terminal domain with GLY
+ motif; Region: Sulfate_tra_GLY; pfam13792"
+ /db_xref="CDD:205965"
+ misc_feature complement(634580..635296)
+ /locus_tag="SARI_00627"
+ /note="Sulfate transporter family; Region: Sulfate_transp;
+ pfam00916"
+ /db_xref="CDD:216188"
+ gene complement(635839..636327)
+ /locus_tag="SARI_00628"
+ CDS complement(635839..636327)
+ /locus_tag="SARI_00628"
+ /inference="protein motif:Gene3D:IPR005658"
+ /inference="protein motif:HMMPfam:IPR005658"
+ /inference="similar to AA sequence:SwissProt:Q8ZNH4"
+ /note="'serine protease inhibitor, inhibits trypsin and
+ other proteases'"
+ /codon_start=1
+ /transl_table=11
+ /product="ecotin"
+ /protein_id="YP_001569694.1"
+ /db_xref="GI:161502582"
+ /db_xref="InterPro:IPR005658"
+ /translation="MKMFVPAVVFAASASAWAVNGDNAQPLEKIAPYPQAEKGMKRQV
+ ITLTPQQDESTLKVELLIGQTLNVDCNQHRLGGKLKTKTLEGWGYDYYVFDNVTSQVS
+ TMMACPEGKKEPKFVTAWLGQDGMLRYNSKLPIVVYTPANVDVKYRIWKADANVQNAV
+ AR"
+ misc_feature complement(635845..636255)
+ /locus_tag="SARI_00628"
+ /note="Protease Inhibitor Ecotin; homodimeric protease
+ inhibitor; Region: Ecotin; cd00242"
+ /db_xref="CDD:153074"
+ misc_feature complement(order(635929..635946,636058..636072))
+ /locus_tag="SARI_00628"
+ /note="secondary substrate binding site; other site"
+ /db_xref="CDD:153074"
+ misc_feature complement(636013..636024)
+ /locus_tag="SARI_00628"
+ /note="primary substrate binding site; other site"
+ /db_xref="CDD:153074"
+ misc_feature complement(636013..636018)
+ /locus_tag="SARI_00628"
+ /note="inhibition loop; other site"
+ /db_xref="CDD:153074"
+ misc_feature complement(635848..635880)
+ /locus_tag="SARI_00628"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:153074"
+ gene 636715..637230
+ /locus_tag="SARI_00629"
+ CDS 636715..637230
+ /locus_tag="SARI_00629"
+ /inference="protein motif:HMMPfam:IPR001450"
+ /inference="protein motif:HMMTigr:IPR004496"
+ /inference="protein motif:ScanRegExp:IPR001450"
+ /inference="similar to AA sequence:INSD:AAL21163.1"
+ /note="Predicted role in electron transfer to the
+ periplasmic nitrate reductase protein NapA."
+ /codon_start=1
+ /transl_table=11
+ /product="ferredoxin-type protein"
+ /protein_id="YP_001569695.1"
+ /db_xref="GI:161502583"
+ /db_xref="InterPro:IPR001450"
+ /db_xref="InterPro:IPR004496"
+ /translation="MSLRKGDIMVDLSRRSMLTGSWRNASNGILPPWAREASYFLAQC
+ LRCDACIQACESNILQRGTGGYPGVDFKQGECSFCYACAQACSESLFLPRHTRAWDLI
+ FTLGENCLARQSVECHRCQDSCEPMAITFRPTLSGIYQPQLDPQACNGCGACVAICPV
+ SAIKAENNHAH"
+ misc_feature 636739..637227
+ /locus_tag="SARI_00629"
+ /note="ferredoxin-type protein; Provisional; Region:
+ PRK10194"
+ /db_xref="CDD:182296"
+ misc_feature 637135..637206
+ /locus_tag="SARI_00629"
+ /note="4Fe-4S binding domain; Region: Fer4; pfam00037"
+ /db_xref="CDD:215671"
+ gene 637220..637483
+ /locus_tag="SARI_00630"
+ CDS 637220..637483
+ /locus_tag="SARI_00630"
+ /inference="protein motif:HMMPfam:IPR005623"
+ /inference="similar to AA sequence:REFSEQ:YP_149917.1"
+ /note="'KEGG: eci:UTI89_C2485 5.2e-32 napD; NapD protein,
+ subunit of nitrate reductase, periplasmic K02570;
+ COG: COG3062 Uncharacterized protein involved in formation
+ of periplasmic nitrate reductase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="assembly protein for periplasmic nitrate
+ reductase"
+ /protein_id="YP_001569696.1"
+ /db_xref="GI:161502584"
+ /db_xref="InterPro:IPR005623"
+ /translation="MHTNWQVCSLVVQAKSQNIAAVRTQLQTLPGCEVALSDVESGQL
+ IVVVEAEQSESLMQAIESVRNVEGVLAVSLVYHQQDEQGEETP"
+ misc_feature 637220..637480
+ /locus_tag="SARI_00630"
+ /note="assembly protein for periplasmic nitrate reductase;
+ Provisional; Region: PRK10553"
+ /db_xref="CDD:182542"
+ gene 637480..639966
+ /locus_tag="SARI_00631"
+ CDS 637480..639966
+ /locus_tag="SARI_00631"
+ /inference="protein motif:HMMPfam:IPR006656"
+ /inference="protein motif:HMMPfam:IPR006657"
+ /inference="protein motif:HMMPfam:IPR006963"
+ /inference="protein motif:HMMTigr:IPR006311"
+ /inference="protein motif:HMMTigr:IPR010051"
+ /inference="protein motif:ScanRegExp:IPR006655"
+ /inference="protein motif:superfamily:IPR009010"
+ /note="periplasmic; catalytic subunit; with NapBC
+ catalyzes the reduction of nitrate to nitrite; NapAB
+ receives electrons from NapC"
+ /codon_start=1
+ /transl_table=11
+ /product="nitrate reductase catalytic subunit"
+ /protein_id="YP_001569697.1"
+ /db_xref="GI:161502585"
+ /db_xref="InterPro:IPR006311"
+ /db_xref="InterPro:IPR006655"
+ /db_xref="InterPro:IPR006656"
+ /db_xref="InterPro:IPR006657"
+ /db_xref="InterPro:IPR006963"
+ /db_xref="InterPro:IPR009010"
+ /db_xref="InterPro:IPR010051"
+ /translation="MKLSRRSFMKANAVAAAAAAAGLSVPGVARAVVGQQEAIKWDKA
+ PCRFCGTGCGVLVGTQQGRVVACQGDPDAPVNRGLNCIKGYFLPKIMYGKDRLTQPML
+ RMKDGKYHKDGEFTPVSWDQAFDVMEEKFKTSLKEKGPEAIGMFGSGQWTIWEGYAAA
+ KLFKAGFRSNNIDPNARHCMASAVVGFMRTFGMDEPMGCYDDIEQADAFVLWGSNMAE
+ MHPILWSRITNRRLSDPNVKVAVLSTFQHRSFELADNGIVFTPQSDLMILNYIANYII
+ QHDAVNQDFFTKHVNLRKGATDIGYGLRPTHPLEKAAKNPGSDASGPMSFDEYKAFVA
+ EYTLDKTAAMTGVPKDQLEQLAQLYADPNKRVISYWTMGFNQHTRGVWANNLVYNLHL
+ LTGKISQPGCGPFSLTGQPSACGTAREVGTFSHRLPADMVVTNEKHRDICEKHWQIPA
+ GTIPAKVGLHAVAQDRALKDGKLNVYWVMCNNNMQAGPNINEDRMPGWRDPRNFIIVS
+ DPYPTVSALSADLILPTAMWVEKEGAYGNAERRTQFWRQQIKAPGEAKSDLWQLVQFS
+ RRFKTEEVWPEALLAQKPELRGKTLYDVLFATPAVSKFPLSELKEDQLNDESRELGFY
+ LQKGLFEEYAWFGRGHGHDLAPFDDYHNARGLRWPVVDGKETQWRYSEGNDPYVKAGE
+ GYKFYGKPDGKAVIFALPFEPAAESPDNEYDLWLSTGRVLEHWHTGSMTRRVPELHRA
+ FPEAVVFIHPLDAKARDLRRGDKVKVSSRRGEVISFVETRGRNRPPQGLVYMPFFDAA
+ QLVNNLTLDATDPLSKETDFKKCAVKLAKV"
+ misc_feature 637480..639963
+ /locus_tag="SARI_00631"
+ /note="nitrate reductase catalytic subunit; Provisional;
+ Region: PRK13532"
+ /db_xref="CDD:237416"
+ misc_feature 637606..639591
+ /locus_tag="SARI_00631"
+ /note="Nitrate reductases, NapA (Nitrate-R-NapA), NasA,
+ and NarB catalyze the reduction of nitrate to nitrite.
+ Monomeric Nas is located in the cytoplasm and participates
+ in nitrogen assimilation. Dimeric Nap is located in the
+ periplasm and is coupled to quinol...; Region:
+ MopB_Nitrate-R-NapA-like; cd02754"
+ /db_xref="CDD:239155"
+ misc_feature order(637615..637617,637621..637626,637636..637638,
+ 637720..637722,638143..638145)
+ /locus_tag="SARI_00631"
+ /note="[4Fe-4S] binding site [ion binding]; other site"
+ /db_xref="CDD:239155"
+ misc_feature order(637726..637728,637927..637929,638002..638004,
+ 638014..638016,638113..638124,638131..638136,
+ 638206..638214,638263..638265,638269..638271,
+ 638590..638598,638605..638607,638704..638709,
+ 638920..638925,638935..638937,639001..639012,
+ 639052..639060,639070..639072,639151..639153)
+ /locus_tag="SARI_00631"
+ /note="molybdopterin cofactor binding site; other site"
+ /db_xref="CDD:239155"
+ misc_feature 639610..639963
+ /locus_tag="SARI_00631"
+ /note="Nitrate reductases, NapA (Nitrate-R-NapA), NasA,
+ and NarB catalyze the reduction of nitrate to nitrite.
+ Monomeric Nas is located in the cytoplasm and participates
+ in nitrogen assimilation. Dimeric Nap is located in the
+ periplasm and is coupled to quinol...; Region:
+ MopB_CT_Nitrate-R-NapA-like; cd02791"
+ /db_xref="CDD:239192"
+ misc_feature order(639631..639645,639649..639660,639859..639861,
+ 639883..639885,639931..639936)
+ /locus_tag="SARI_00631"
+ /note="molybdopterin cofactor binding site; other site"
+ /db_xref="CDD:239192"
+ gene 639973..640668
+ /gene="napG"
+ /locus_tag="SARI_00632"
+ CDS 639973..640668
+ /gene="napG"
+ /locus_tag="SARI_00632"
+ /inference="protein motif:HMMPfam:IPR001450"
+ /inference="protein motif:HMMTigr:IPR004494"
+ /inference="protein motif:ScanRegExp:IPR001450"
+ /inference="similar to AA sequence:INSD:AAV76607.1"
+ /note="part of NapHG quinol dehydrogenase; couples
+ electron transfer from ubiquinone-ubiquinol couple via
+ NapC/B to NapA; secreted by twin arginine translocation
+ pathway"
+ /codon_start=1
+ /transl_table=11
+ /product="quinol dehydrogenase periplasmic component"
+ /protein_id="YP_001569698.1"
+ /db_xref="GI:161502586"
+ /db_xref="InterPro:IPR001450"
+ /db_xref="InterPro:IPR004494"
+ /translation="MSRTAKLQNGRRRFLRDVVRTAGGLAAVGVALGLQQQTARATGV
+ RLRPPGALNENAFASACVRCGQCVQACPYDTLKLATLASGLSAGTPYFVARDIPCEMC
+ EDIPCAKVCPSGALDKDIVSIDDSRMGLAVLLDQENCLNFQGLRCDVCYRECPKIDEA
+ ITLELDRNMRTGKHARFLPTVHSDACTGCGKCEKVCVLEQPAIKVLPLSLAKGELGHH
+ YRFGWLEGKDGKS"
+ misc_feature 639973..640662
+ /gene="napG"
+ /locus_tag="SARI_00632"
+ /note="quinol dehydrogenase periplasmic component;
+ Provisional; Region: napG; PRK09476"
+ /db_xref="CDD:236534"
+ gene 640655..641518
+ /gene="napH"
+ /locus_tag="SARI_00633"
+ CDS 640655..641518
+ /gene="napH"
+ /locus_tag="SARI_00633"
+ /inference="protein motif:HMMPfam:IPR001450"
+ /inference="protein motif:HMMTigr:IPR011886"
+ /inference="protein motif:ScanRegExp:IPR001450"
+ /inference="similar to AA sequence:REFSEQ:NP_461200.1"
+ /note="part of NapHG quinol dehydrogenase; couples
+ electron transfer from ubiquinone-ubiquinol couple via
+ NapC/B to NapA"
+ /codon_start=1
+ /transl_table=11
+ /product="quinol dehydrogenase membrane component"
+ /protein_id="YP_001569699.1"
+ /db_xref="GI:161502587"
+ /db_xref="InterPro:IPR001450"
+ /db_xref="InterPro:IPR011886"
+ /translation="MANRKRDAGREALAKKGWWRSHRWLVLRRMSQFMVLGMFLSGPW
+ LGFWVLHGNYSGSLLFDTLPLTDPLITLESLASGHLPAAVALTGAVIITVLYALAGKR
+ VFCSWVCPLNPVTDLANWMRRKLDLNQSATIPRHIRYVLLVVVLIGSALTGTLLWEWI
+ NPVSLLGRSLIMGFSSGALLIIALFLFDLLVVEHGWCGHICPMGALYGVLGSKGVVTV
+ TAKKREKCNRCMDCFHVCPEPHVLRVPVLDEQSPAQVTHRDCMTCGRCVDVCSEDVFT
+ ITTRWSSGAKS"
+ misc_feature 640703..641515
+ /gene="napH"
+ /locus_tag="SARI_00633"
+ /note="quinol dehydrogenase membrane component;
+ Provisional; Region: napH; PRK09477"
+ /db_xref="CDD:236535"
+ misc_feature 640895..641029
+ /gene="napH"
+ /locus_tag="SARI_00633"
+ /note="4Fe-4S binding domain; Region: Fer4_5; pfam12801"
+ /db_xref="CDD:221777"
+ misc_feature <641327..>641464
+ /gene="napH"
+ /locus_tag="SARI_00633"
+ /note="The HCP family of iron-sulfur proteins includes
+ hybrid cluster protein (HCP), acetyl-CoA synthase (ACS),
+ and carbon monoxide dehydrogenase (CODH), all of which
+ contain [Fe4-S4] metal clusters at their active sites.
+ These proteins have a conserved...; Region: HCP_like;
+ cl14655"
+ /db_xref="CDD:246686"
+ gene 641494..641964
+ /gene="napB"
+ /locus_tag="SARI_00634"
+ CDS 641494..641964
+ /gene="napB"
+ /locus_tag="SARI_00634"
+ /inference="protein motif:HMMPfam:IPR005591"
+ /inference="similar to AA sequence:INSD:AAL21158.1"
+ /note="small subunit of periplasmic nitrate reductase;
+ receives electrons from the membrane-bound NapC and passes
+ them to NapA"
+ /codon_start=1
+ /transl_table=11
+ /product="citrate reductase cytochrome c-type subunit"
+ /protein_id="YP_001569700.1"
+ /db_xref="GI:161502588"
+ /db_xref="InterPro:IPR005591"
+ /translation="MEFGSEIMKSHDLMKALCQWMATLALVVSGAVWAANGVDLSQSP
+ EVSGTQEGAIRMPKEQERMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTT
+ GAPRISPTHFMDSDGKVSGNVAPRRYFCLQCHVPQSDTAPIVDNTFTPSKGYGK"
+ misc_feature 641515..641961
+ /gene="napB"
+ /locus_tag="SARI_00634"
+ /note="nitrate reductase cytochrome C550 subunit;
+ Provisional; Region: napB; PRK11586"
+ /db_xref="CDD:183214"
+ gene 641974..642576
+ /locus_tag="SARI_00635"
+ CDS 641974..642576
+ /locus_tag="SARI_00635"
+ /inference="protein motif:BlastProDom:IPR005126"
+ /inference="protein motif:HMMPfam:IPR005126"
+ /inference="protein motif:HMMPIR:IPR011885"
+ /inference="protein motif:HMMTigr:IPR011885"
+ /inference="similar to AA sequence:REFSEQ:YP_217247.1"
+ /note="with NapABDFGH functions as a nitrate reductase;
+ NapC functions as an electron shuttle between NapAB and
+ NapGH or quinone"
+ /codon_start=1
+ /transl_table=11
+ /product="cytochrome c-type protein NapC"
+ /protein_id="YP_001569701.1"
+ /db_xref="GI:161502589"
+ /db_xref="InterPro:IPR005126"
+ /db_xref="InterPro:IPR011885"
+ /translation="MENSNRKPGWIKRVWRWWRSPSRLALGTLLLIGFIGGIIFWGGF
+ NTGMEKANTEEFCISCHEMRNTVYQEYMETVHYNNRSGVRATCPDCHVPHEWGPKMIR
+ KIKASKELYAKVFGLIDTPQKFEAHRLTMAQNEWRRMKDNNSQECRNCHNFDFMDLTA
+ QKGVAAKMHDQAVKDGQTCIDCHKGIAHKLPDMRDVKPGF"
+ misc_feature 641974..642573
+ /locus_tag="SARI_00635"
+ /note="cytochrome c-type protein NapC; Provisional;
+ Region: PRK10617"
+ /db_xref="CDD:182590"
+ misc_feature 642001..642573
+ /locus_tag="SARI_00635"
+ /note="Nitrate/TMAO reductases, membrane-bound tetraheme
+ cytochrome c subunit [Energy production and conversion];
+ Region: TorC; COG3005"
+ /db_xref="CDD:225550"
+ gene 642597..643217
+ /locus_tag="SARI_00636"
+ CDS 642597..643217
+ /locus_tag="SARI_00636"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR005895"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:INSD:AAC75261.2"
+ /note="ATP-binding protein; required for proper cytochrome
+ c maturation"
+ /codon_start=1
+ /transl_table=11
+ /product="cytochrome c biogenesis protein CcmA"
+ /protein_id="YP_001569702.1"
+ /db_xref="GI:161502590"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR005895"
+ /translation="MLEARELHCERDERTLFRGLSFTVDAGEWVQITGGNGAGKTTLL
+ RLLTGLARPDGGEVYWRGEPLRRVRDSYHQDLLWTGHQPGIKTRLTAQENLRFFHQDS
+ DTAQCLEALALAGLAGYEDIPVNQLSAGQQRRVALARLWLTRAPLWILDEPFTAIDVN
+ GVARLTQRMARHTEQGGIVILTTHQPVNVAPDKIRRIALTGGRAGQ"
+ misc_feature 642597..643199
+ /locus_tag="SARI_00636"
+ /note="cytochrome c biogenesis protein CcmA; Provisional;
+ Region: PRK13538"
+ /db_xref="CDD:184125"
+ misc_feature 642600..643196
+ /locus_tag="SARI_00636"
+ /note="Cytochrome c biogenesis ATP-binding export protein;
+ Region: ABC_CcmA_heme_exporter; cd03231"
+ /db_xref="CDD:213198"
+ misc_feature 642696..642719
+ /locus_tag="SARI_00636"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213198"
+ misc_feature order(642705..642710,642714..642722,642837..642839,
+ 643047..643052,643146..643148)
+ /locus_tag="SARI_00636"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213198"
+ misc_feature 642828..642839
+ /locus_tag="SARI_00636"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213198"
+ misc_feature 642975..643004
+ /locus_tag="SARI_00636"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213198"
+ misc_feature 643035..643052
+ /locus_tag="SARI_00636"
+ /note="Walker B; other site"
+ /db_xref="CDD:213198"
+ misc_feature 643059..643070
+ /locus_tag="SARI_00636"
+ /note="D-loop; other site"
+ /db_xref="CDD:213198"
+ misc_feature 643134..643154
+ /locus_tag="SARI_00636"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213198"
+ gene 643214..643873
+ /locus_tag="SARI_00637"
+ CDS 643214..643873
+ /locus_tag="SARI_00637"
+ /inference="protein motif:HMMPfam:IPR003544"
+ /inference="protein motif:HMMTigr:IPR003544"
+ /inference="similar to AA sequence:INSD:ABF04391.1"
+ /note="'COG: COG2386 ABC-type transport system involved in
+ cytochrome c biogenesis, permease component;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569703.1"
+ /db_xref="GI:161502591"
+ /db_xref="InterPro:IPR003544"
+ /translation="MMWRIFRLELRVAFRHSAEIANPLWFFLIVITLFPLSIGPEPQL
+ LARIAPGIILVAALLSSLLALERLFRDDLQDGSLEQLMLLPLPLPAVVLAKVLAHWVV
+ TGLPLIILSPLVALLLGMDVYGWKMMALTLLLGTPTLGFLGAPGVGLTVGLKRGGVLL
+ SVLVLPLTIPLLIFATAAMEAASMHLPVGGYMAILGALLAGSATLSPFATAAALRISL
+ Q"
+ misc_feature 643226..643858
+ /locus_tag="SARI_00637"
+ /note="heme exporter protein CcmB; Region: ccmB;
+ TIGR01190"
+ /db_xref="CDD:200083"
+ gene 643916..644653
+ /locus_tag="SARI_00638"
+ CDS 643916..644653
+ /locus_tag="SARI_00638"
+ /inference="protein motif:HMMPfam:IPR002541"
+ /inference="protein motif:HMMTigr:IPR003557"
+ /inference="similar to AA sequence:INSD:AAG57334.1"
+ /note="'KEGG: vfi:VF1822 1.3e-81 heme chaperone heme-lyase
+ K02195;
+ COG: COG0755 ABC-type transport system involved in
+ cytochrome c biogenesis, permease component;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569704.1"
+ /db_xref="GI:161502592"
+ /db_xref="InterPro:IPR002541"
+ /db_xref="InterPro:IPR003557"
+ /translation="MWKTLHQLAIPPRLYQICGGLIPWSAIASAVVLAAGWIWGFGFA
+ PADYQQGESYRIMYLHVPAAVWSMGIYASMAVAAFIGLVWQMKMANLALAAMAPVGAV
+ YTFIALVTGSAWGKPMWGTWWVWDARLTSELVLLFLYVGAIALWHAFDDRKMAGRAAG
+ ILVLTGVVNLPVIHYSVEWWNTLHQGSTRMQQSIDPAMRTPLRLAITGYLLLFITLSL
+ MRMRNLILIMEKRRPWVSELILKRGRQ"
+ misc_feature 644048..644590
+ /locus_tag="SARI_00638"
+ /note="heme exporter protein CcmC; Region: ccmC;
+ TIGR01191"
+ /db_xref="CDD:233306"
+ gene 644650..644862
+ /locus_tag="SARI_00639"
+ CDS 644650..644862
+ /locus_tag="SARI_00639"
+ /inference="protein motif:HMMPfam:IPR007078"
+ /inference="similar to AA sequence:INSD:AAO71197.1"
+ /note="'COG: COG3114 Heme exporter protein D;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569705.1"
+ /db_xref="GI:161502593"
+ /db_xref="InterPro:IPR007078"
+ /translation="MSTAFASWSDFFAMGGYAFYVWLAVAMTVVPVAILVVQSAMQHR
+ AILRHVAQQRAREARMRAAQAQQEAV"
+ misc_feature 644659..>644799
+ /locus_tag="SARI_00639"
+ /note="Heme exporter protein D [Intracellular trafficking
+ and secretion]; Region: CcmD; COG3114"
+ /db_xref="CDD:225656"
+ gene 644859..645338
+ /locus_tag="SARI_00640"
+ CDS 644859..645338
+ /locus_tag="SARI_00640"
+ /inference="protein motif:BlastProDom:IPR004329"
+ /inference="protein motif:HMMPfam:IPR004329"
+ /inference="similar to AA sequence:INSD:CAD03179.1"
+ /note="CycJ; periplasmic heme chaperone that binds heme
+ transiently via a histidine residue and delivers it to
+ newly synthesized and exported c-type cytochromes;
+ requires the ATP hydrolysis activity of the CcmA protein
+ in order to transfer the heme to the apocytochrome; part
+ of the cytochrome c maturation system; periplasmic protein
+ anchored to the inner membrane"
+ /codon_start=1
+ /transl_table=11
+ /product="cytochrome c-type biogenesis protein CcmE"
+ /protein_id="YP_001569706.1"
+ /db_xref="GI:161502594"
+ /db_xref="InterPro:IPR004329"
+ /translation="MNLRRKNRLWVVCAVLAGLALTTALVLYALRANIDLFYTPGEIL
+ YGRRETQQMPEVGQRLRVGGMVMPGSVKRAPDSLKVNFSLYDAEGVVEVTYDGILPDL
+ FREGQGVVVQGELDRRNHVQAKEVLAKHDENYTPPEVEKAMQENHRRPQSGYKDKSS"
+ misc_feature 644859..645335
+ /locus_tag="SARI_00640"
+ /note="cytochrome c-type biogenesis protein CcmE;
+ Reviewed; Region: PRK13150"
+ /db_xref="CDD:139376"
+ gene 645335..647266
+ /locus_tag="SARI_00641"
+ CDS 645335..647266
+ /locus_tag="SARI_00641"
+ /inference="protein motif:HMMPfam:IPR002541"
+ /inference="protein motif:HMMTigr:IPR003568"
+ /note="'KEGG: vfi:VF1819 7.1e-218 heme
+ chaperone--apocytochrome heme-lyase K02198;
+ COG: COG1138 Cytochrome c biogenesis factor;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569707.1"
+ /db_xref="GI:161502595"
+ /db_xref="InterPro:IPR002541"
+ /db_xref="InterPro:IPR003568"
+ /translation="MMPEIGNALLCLALGVALLLSVYPLWGAARGDARMMASSGVFAW
+ LLFLCVAGAFFVLAHAFVVNDFTVAYVAGNSNTQLPVWYRVAATWGAHEGSLLLWVLL
+ MSGWTLAVAVFSRPVPVDIVARVLAVMGMVSAGFLVFILFTSNPFARTLPDFPVEGRD
+ LNPLLQDPGLIFHPPLLYMGYVGFSVAFAFAIAALLCGRLDSAFARFSRPWTLAAWVF
+ LTLGIVLGSAWAYYELGWGGWWFWDPVENASFMPWLAGTALLHSLAVTEQRASFKAWT
+ LLLSICAFSLCLLGTFLVRSGVLVSVHAFASDPARGMFILAFMVLVTGGSLLLFAVRG
+ HRVRSRVNNALWSRESLLLGNNVLLMAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFN
+ TMFTWLMAPFALLLGVGPLVRWGRDRPRKIRNLLLVAFITTLLLSVLLPWLLQDRIAA
+ MTVAGMAMACWIAVLAVAEAVQRVSRGTRTSFSYWGMVAAHLGLAVTITGIAFSQNYS
+ IERDVRMRAGDSVTIHDYRFTFREVRDITGPNYRGGVAIIGVTRDGAPEAVLHAEKRL
+ YNTSRMVMTEAAIDGGLTRDLYAALGEELDNGAWAVRLYYKPFVRWIWAGGLLMALGG
+ LLCLADPRYRRRKPLPEAG"
+ misc_feature 645491..647236
+ /locus_tag="SARI_00641"
+ /note="c-type cytochrome biogenesis protein CcmF; Region:
+ nrfE; TIGR00353"
+ /db_xref="CDD:129451"
+ gene 647263..647820
+ /locus_tag="SARI_00642"
+ CDS 647263..647820
+ /locus_tag="SARI_00642"
+ /inference="protein motif:BlastProDom:IPR011594"
+ /inference="protein motif:Gene3D:IPR012335"
+ /inference="protein motif:HMMPfam:IPR013740"
+ /inference="protein motif:HMMTigr:IPR004799"
+ /inference="protein motif:ScanRegExp:IPR006662"
+ /inference="protein motif:superfamily:IPR012336"
+ /inference="similar to AA sequence:INSD:AAO71200.1"
+ /note="'KEGG: azo:azo3929 9.7e-31 ccmG; protein
+ disulfide-isomerase K01829;
+ COG: COG0526 Thiol-disulfide isomerase and THIoredoxins;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569708.1"
+ /db_xref="GI:161502596"
+ /db_xref="InterPro:IPR004799"
+ /db_xref="InterPro:IPR006662"
+ /db_xref="InterPro:IPR011594"
+ /db_xref="InterPro:IPR012335"
+ /db_xref="InterPro:IPR012336"
+ /db_xref="InterPro:IPR013740"
+ /translation="MKRNVLLLPLLIFLLIAAALLWQLARNAEGDDPTNLESALTGKP
+ VPAFRLESLETPGQYYQAEVLTQGKPVLLNVWATWCPTCRAEHQYLNRLAAQGIRVVG
+ LNYKDDREKAVAWLKELGNPYALSLSDSDGMLGLDLGVYGAPETFLIDGKGIIRYRHA
+ GDLNDRVWESEIRPLWDKYSKEAGQ"
+ misc_feature 647263..647817
+ /locus_tag="SARI_00642"
+ /note="thiol:disulfide interchange protein DsbE;
+ Provisional; Region: PRK15412"
+ /db_xref="CDD:185310"
+ misc_feature 647389..647769
+ /locus_tag="SARI_00642"
+ /note="TlpA-like family, DsbE (also known as CcmG and
+ CycY) subfamily; DsbE is a membrane-anchored, periplasmic
+ TRX-like reductase containing a CXXC motif that
+ specifically donates reducing equivalents to apocytochrome
+ c via CcmH, another cytochrome c...; Region:
+ TlpA_like_DsbE; cd03010"
+ /db_xref="CDD:239308"
+ misc_feature order(647500..647502,647509..647511)
+ /locus_tag="SARI_00642"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:239308"
+ misc_feature 647581..647649
+ /locus_tag="SARI_00642"
+ /note="central insert; other site"
+ /db_xref="CDD:239308"
+ gene 647817..648854
+ /locus_tag="SARI_00643"
+ CDS 647817..648854
+ /locus_tag="SARI_00643"
+ /inference="protein motif:BlastProDom:IPR005616"
+ /inference="protein motif:Gene3D:IPR011990"
+ /inference="protein motif:HMMPfam:IPR005616"
+ /inference="similar to AA sequence:INSD:AAL21149.1"
+ /note="'KEGG: stm:STM4281 1.1e-17 nrfE; putative methylase
+ K04016;
+ COG: COG3088 Uncharacterized protein involved in
+ biosynthesis of c-type cytochromes;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569709.1"
+ /db_xref="GI:161502597"
+ /db_xref="InterPro:IPR005616"
+ /db_xref="InterPro:IPR011990"
+ /translation="MRFLLGALMLLVSGSALATIDVMPFKDEAQEQQFRQLTEQLRCP
+ KCQNNSIADSGSMIATDLRQKVYELIQEGKSNKEIVDYMVARYGNFVTYDPPLTPLTI
+ LLWVLPAAAVGAGGWIIFARSRRRVRLKQEEFSDAVPADGKRAGSGAYVPGIVIALIV
+ AAISYYQTGSYGQVKIWRQATALTPVLLERALDPKAQPLNEEEMARLALGLRTRLQND
+ AGNVEGWLMLGRIGMVLGNAGTATGAYANAYRLDPKNSDAALGYAEALTRSSDPEDNR
+ RGGELLRRLVRSDHTDIRVLSLYAFNAFEQQRFGEAVAAWEMMLKLLPAGDARRAVIE
+ RSIRQALAQEK"
+ misc_feature 647823..648263
+ /locus_tag="SARI_00643"
+ /note="Uncharacterized protein involved in biosynthesis of
+ c-type cytochromes [Posttranslational modification,
+ protein turnover, chaperones]; Region: CcmH; COG3088"
+ /db_xref="CDD:225630"
+ misc_feature <648219..648851
+ /locus_tag="SARI_00643"
+ /note="Cytochrome c biogenesis factor [Posttranslational
+ modification, protein turnover, chaperones]; Region:
+ COG4235"
+ /db_xref="CDD:226687"
+ gene complement(648920..649564)
+ /locus_tag="SARI_00645"
+ CDS complement(648920..649564)
+ /locus_tag="SARI_00645"
+ /inference="protein motif:BlastProDom:IPR000792"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000792"
+ /inference="protein motif:HMMPfam:IPR001789"
+ /inference="protein motif:HMMSmart:IPR000792"
+ /inference="protein motif:HMMSmart:IPR001789"
+ /inference="protein motif:ScanRegExp:IPR000792"
+ /inference="protein motif:superfamily:IPR011006"
+ /inference="similar to AA sequence:REFSEQ:YP_217238.1"
+ /note="nitrate/nitrite response regulator NarP; NarP is
+ phosphorylated by NarX and NarQ and can activate fdnG and
+ nitrite or nitrate reductase systems; represses expression
+ of other anaerobic genes"
+ /codon_start=1
+ /transl_table=11
+ /product="transcriptional regulator NarP"
+ /protein_id="YP_001569710.1"
+ /db_xref="GI:161502599"
+ /db_xref="InterPro:IPR000792"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR011006"
+ /db_xref="InterPro:IPR011991"
+ /translation="MPEVTPVQVLIVDDHPLMRRGIRQLLELDPAFHVVAEAGDGASA
+ IDLANRIEPDLILLDLNMKGLSGLDTLNALRRDGVTAQIIILTVSDSASDIYALIDAG
+ ADGYLLKDSDPEVLLEAIRKGANGGKVFSERVNEYLRERERFGAQEDPFSILTERELD
+ VLHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQTRGM"
+ misc_feature complement(648923..649564)
+ /locus_tag="SARI_00645"
+ /note="transcriptional regulator NarP; Provisional;
+ Region: PRK10403"
+ /db_xref="CDD:182431"
+ misc_feature complement(649199..649537)
+ /locus_tag="SARI_00645"
+ /note="Signal receiver domain; originally thought to be
+ unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
+ recently identified in eukaroytes ETR1 Arabidopsis
+ thaliana; this domain receives the signal from the sensor
+ partner in a two-component systems; Region: REC; cd00156"
+ /db_xref="CDD:238088"
+ misc_feature complement(order(649235..649240,649247..649249,
+ 649304..649306,649364..649366,649388..649390,
+ 649523..649528))
+ /locus_tag="SARI_00645"
+ /note="active site"
+ /db_xref="CDD:238088"
+ misc_feature complement(649388..649390)
+ /locus_tag="SARI_00645"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238088"
+ misc_feature complement(order(649364..649372,649376..649381))
+ /locus_tag="SARI_00645"
+ /note="intermolecular recognition site; other site"
+ /db_xref="CDD:238088"
+ misc_feature complement(649232..649240)
+ /locus_tag="SARI_00645"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238088"
+ misc_feature complement(648935..649105)
+ /locus_tag="SARI_00645"
+ /note="C-terminal DNA-binding domain of LuxR-like
+ proteins. This domain contains a helix-turn-helix motif
+ and binds DNA. Proteins belonging to this group are
+ response regulators; some act as transcriptional
+ activators, others as transcriptional repressors. Many...;
+ Region: LuxR_C_like; cd06170"
+ /db_xref="CDD:99777"
+ misc_feature complement(order(648962..648964,648995..649009,
+ 649013..649018,649022..649027,649049..649057,
+ 649094..649102))
+ /locus_tag="SARI_00645"
+ /note="DNA binding residues [nucleotide binding]"
+ /db_xref="CDD:99777"
+ misc_feature complement(order(648935..648940,648947..648949,
+ 648956..648964,649055..649057,649061..649063,
+ 649067..649069))
+ /locus_tag="SARI_00645"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99777"
+ gene 649563..649700
+ /locus_tag="SARI_00644"
+ CDS 649563..649700
+ /locus_tag="SARI_00644"
+ /note="'Psort location: golgi, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569711.1"
+ /db_xref="GI:161502598"
+ /translation="MLYLLSFIRMIIVFSAEIVQIHHIAKSVNFTLIRVWVSSKTCER
+ I"
+ gene 650102..650587
+ /locus_tag="SARI_00646"
+ CDS 650102..650587
+ /locus_tag="SARI_00646"
+ /inference="protein motif:HMMPfam:IPR002196"
+ /inference="similar to AA sequence:INSD:AAW67534.1"
+ /note="'KEGG: cbu:CBU_1031 3.2e-09 lysozyme, putative
+ K01185;
+ COG: NOG21649 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569712.1"
+ /db_xref="GI:161502600"
+ /db_xref="InterPro:IPR002196"
+ /translation="MNKNSDIFSLLKVEEGVSHKPYIDALGYPTVGVGFKLGPQGANL
+ KNYTFCLTDNVIEAWLQENINRVYKSMQQNEKINQALLCSNSVRTDILISMAYQMGVN
+ GLAGFNSMLMAITELEWNNAADEMRRSIWAKQTPKRAERHAAVIESGQWAPVYNFAIN
+ Q"
+ misc_feature 650120..650560
+ /locus_tag="SARI_00646"
+ /note="lysozyme_like domain. This contains several
+ members including Soluble Lytic Transglycosylases (SLT),
+ Goose Egg-White Lysozymes (GEWL), Hen Egg-White Lysozymes
+ (HEWL), chitinases, bacteriophage lambda lysozymes,
+ endolysins, autolysins, and chitosanases; Region:
+ lysozyme_like; cl00222"
+ /db_xref="CDD:241700"
+ misc_feature 650144..650146
+ /locus_tag="SARI_00646"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:238249"
+ gene 650667..650987
+ /locus_tag="SARI_00647"
+ CDS 650667..650987
+ /locus_tag="SARI_00647"
+ /note="'Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569713.1"
+ /db_xref="GI:161502601"
+ /translation="MFQLLGQGTVWIILGAIAGGTVFVVSASEYILSVRIILFAVSVI
+ IGIIFADLVALALTHLINKHFSVMLVIPSSVGAVVASTLSIRVLTFLGKRIVDLQAGK
+ NNHI"
+ misc_feature 650757..>650957
+ /locus_tag="SARI_00647"
+ /note="ABC-type transport system involved in cytochrome bd
+ biosynthesis, ATPase and permease components [Energy
+ production and conversion / Posttranslational
+ modification, protein turnover, chaperones]; Region: CydD;
+ COG4988"
+ /db_xref="CDD:227321"
+ gene complement(651158..651295)
+ /locus_tag="SARI_00649"
+ CDS complement(651158..651295)
+ /locus_tag="SARI_00649"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569714.1"
+ /db_xref="GI:161502603"
+ /translation="MGISLSVSFAIAKDALQRLKLKYSGCFVLSKLSFFEKLRFILIQ
+ E"
+ gene 651245..651577
+ /locus_tag="SARI_00648"
+ CDS 651245..651577
+ /locus_tag="SARI_00648"
+ /note="'COG: COG5295 Autotransporter adhesin;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569715.1"
+ /db_xref="GI:161502602"
+ /translation="MQGIFGDGEADRQRNPHAIALGLNYPPVPLVTIGVNQRMGQNCL
+ QFNPLLILSVTRLIVLHSPSQQIAQQRKWLLLTVKISDANGKAAIKLSGGDVKVATVI
+ EAINGSME"
+ misc_feature <651251..651370
+ /locus_tag="SARI_00648"
+ /note="Protein of unknown function (DUF3442); Region:
+ DUF3442; pfam11924"
+ /db_xref="CDD:221317"
+ gene 651605..651760
+ /locus_tag="SARI_00650"
+ CDS 651605..651760
+ /locus_tag="SARI_00650"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569716.1"
+ /db_xref="GI:161502604"
+ /translation="MPTGKMQGPTPLVFKRNYHNKKTKLVVPMKDDAGNSLSCNDIVF
+ FSENVSN"
+ gene complement(651915..654830)
+ /locus_tag="SARI_00651"
+ CDS complement(651915..654830)
+ /locus_tag="SARI_00651"
+ /inference="similar to AA sequence:REFSEQ:YP_335321.1"
+ /note="'COG: COG3209 Rhs family protein;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569717.1"
+ /db_xref="GI:161502605"
+ /translation="MCTVTVASGTPVISVNDNRGFIVRILNWNREKASVPRRLLVNHS
+ YHADDSPVEEKRDPRLFSAWLKDRSVVANLRNMSSLAGQVIKRESTDSGWLVTLFDAA
+ ARLVWLTDGRGATQEQTYDELGRLVQTREQQKDGEKRVSRITEYGDKGLEGDNLKGLP
+ VRQYDDSGLQIIHSVALSGATLQISQQFLMSGDIAPNWPADDTNRKRLLDSEIYVTSL
+ QADAFANTLTRTDAMGHQQSWRYDISGKVTSQAIKLDGETKQTLLEHISWSAASQVLE
+ EKTSNGITTTYGYEPETQWLSTLAAQRSDNTVLQSLAYRYDNTGNVTSITDNQVATRY
+ YRNQVTDGLKEFSYDALYQLLEATGRENAGNNIMPYSSLPAALTPVPTDNSQYVNYTR
+ TWMWDDSGNLQSQTHTGAGNYTRTMITETTSNRSVQMNDGGAQASDEINQWFDSNGNL
+ KQLQISASSSSHNMIWDGNNNLQAVVLLCRSATDMAQNDREIYQYSGNRRVRKQTRTL
+ TNASQQLWTVDEVRYLPGLELRQSWQESVGGNNVISVLHTLTGQIGRAGIRILHWESG
+ KPNSIDNNQLRWSLCDNIGSASLELDADGQQISREEYYPFGGTAVWAARNELEASYKV
+ IRYSGKERDGTGLYYYGYRYYAPWLCRWTAADPGREIDGLNLYRMVRNNPLTLSDAEG
+ LAPTASGGAEKPKLSDKQSQKVDAVYKKMGTGKLWCAKNPQFSCLYAPSSAARVRQIS
+ SDNIRALKKRLGKMSPEEKTFVERFMQLEFQMIHHTNAHITNPKTLEETFLSRDELIN
+ RRIVFDTTHTTDADVVQLANTGFAFFALSVKGIKLQKSNSRFGKNVHVVSMDTAKQKS
+ PYMTEAHMVINNTLKFKERKLSERLVTLLGGDDIARRDARVFSHQVVADDAKDTLFHI
+ DDIHMGLALSILWSIRSAPISERSRQILLGVKGEAQFEQLITTLFRPQILVPVELTV"
+ misc_feature complement(652770..654626)
+ /locus_tag="SARI_00651"
+ /note="Rhs family protein [Cell envelope biogenesis, outer
+ membrane]; Region: RhsA; COG3209"
+ /db_xref="CDD:225750"
+ misc_feature complement(652782..653024)
+ /locus_tag="SARI_00651"
+ /note="RHS repeat-associated core domain; Region:
+ Rhs_assc_core; TIGR03696"
+ /db_xref="CDD:234316"
+ gene complement(655109..657997)
+ /locus_tag="SARI_00652"
+ CDS complement(655109..657997)
+ /locus_tag="SARI_00652"
+ /inference="similar to AA sequence:INSD:AAY39062.1"
+ /note="'COG: COG3209 Rhs family protein;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569718.1"
+ /db_xref="GI:161502606"
+ /translation="MTLSTATPVVTICDNRGMTVRTLNWNRESDQDPLRLLLSHSQLE
+ TSSRTALYRDPRRFIAWQQDSTAVPNLHNRLSLAGQILKRDSTDSGWHVMLFNAEGAA
+ AWGIDARGTIQTHAWDVLGRPVSGIEQAAGDAPRTAWRKEYGDAVVSPEDAYRNNLRG
+ VCVHQYDDGGLLSINAIALSGAVLQQTKRFLNDAEGKPDWPENDTACDALLEDSGFIS
+ TIVANAAGAPFSWTDSQNNRVATFYDVSGATCRQTLQLAGQTTPLTLLENIAFNPVGL
+ IAEEISGNGVTTTYSYEPETLRLHNLHAVRSDSSVLQDLTYDYDPVGNRTVITDSTVN
+ IRYYRNQSTSGDRIFTYDALYQLISACGRENASNTQAPYAELPTLIPTDSNQTLGYTR
+ SYQYDDSGNLSSFSHLGAASFTRTMVISAQSNRSLLQDDNGSLTPDDTDAGFDPCGNL
+ RRLQTSATTTDNMRWDNSNHLQAVILLDRKGDIQQSDREIYQYSAGTRVRKQTRRLTK
+ AEDNLWTVDEVRYLPGLELRRHWQETVSGDTITPHAATEALHVITTQAGRASIRVLHW
+ ELGKPASINNDQVRWSVDDSSGAASLELDAQGQIISHEEYYPFGGTAVWAARSELEAS
+ YRVIRYSGKERDGTGLYYYGYRYYAPWLCRWTAADPGQEIDGLNLYRMVRNNPVTLTD
+ VDGLMPKLMLTKEEIAEFEHLYESALKSGKYEKHSLAMKRFILTNHSRASTYPLKTET
+ SINILFHVIYEQSKYMSPPDFSQDALRAHKEAKAKAAQATAENAKKAILYVWAAQSHL
+ IQNASPTERLKASKLVKHIRGLNRDPNATRDRHDFFEQKEHKGVANGIYELDGKTGEE
+ LANLLDDYINNNATLINKTLYRGTTTLPSVRPGRFTATSESKEIAGCFGKYIETFKGG
+ YGVRVPNIYFNKDEKEYLFSRSAPPKLAHSTNPRQRALDPGAGSSKAA"
+ misc_feature complement(655940..>657406)
+ /locus_tag="SARI_00652"
+ /note="Rhs family protein [Cell envelope biogenesis, outer
+ membrane]; Region: RhsA; COG3209"
+ /db_xref="CDD:225750"
+ misc_feature complement(655940..656182)
+ /locus_tag="SARI_00652"
+ /note="RHS repeat-associated core domain; Region:
+ Rhs_assc_core; TIGR03696"
+ /db_xref="CDD:234316"
+ gene complement(658017..660662)
+ /locus_tag="SARI_00653"
+ CDS complement(658017..660662)
+ /locus_tag="SARI_00653"
+ /inference="protein motif:ScanRegExp:IPR006025"
+ /inference="similar to AA sequence:INSD:AAP57765.1"
+ /note="'COG: COG3209 Rhs family protein;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569719.1"
+ /db_xref="GI:161502607"
+ /db_xref="InterPro:IPR006025"
+ /translation="MTLAIATPVIAVCDNHGITIRTLNWNREDKDSPRRLLVTHTRLD
+ TASRATVQRDPRRFAARQQDDTALSNLYCMSSLTGQVLKRASTDSGWQVTRFDAASRT
+ AWSIDGRGTVHTQAYDMLGRPQSGSKRLKGEALRVSWRHAYTDTCSADANAQKNNLRG
+ LCVQRWDDSGLQTVESVALSGAILRQTQQFLLSAQAQPDWPEDDAGKQALLEDKIYVS
+ TISADARGISLNQTDAMGNQQSWRYDVSSHVKSQYATLSDGKKQTLLEDTMWSAAGQV
+ LEEKTGNGVTTSYRYEPETQRLSAMSALRADSTLLQDLDYGYDNTGNLISITDNTIAT
+ RYFQNQQTDGRREFTYDALYQLLEATGRENAGNTTVPYAVLPASIPTDSTQTIGYTRS
+ FRYDDSGNLLSLSHQGAACFTRTMVVSDASNRSRLQNDTGTLTPDDVDAAFDPNGNLL
+ NLQVSATASEQLILDASDHLQTVILLDRNGDFQQSDREIYQYRAGMRMRKQTRILTKA
+ DSNLWTVDEVRYLPGLELRRHWQETITGDTVTPQDPTEELHVITTQAGRAGIRLLHWK
+ TGKPDSIDNDQARWQMSDNFYALELDAQGQTISREEYYPFGGTAVWAARSELEANARV
+ VPENSWWTYLQHLWERWNPLADNPSNSTNKPNEINNETRAIIKDYMGNDSKETIKTLK
+ DALEKMHQAAAALNENSFRNIKEEPYAPKNATACVGTNEHNLYDTSKDIKILINYEDT
+ GKRHLYDIATIIIHEMTHLVLKTKDYCNSQTVPFSGKFDGKSTKKLRQYASQTNSTPL
+ TGADNIANLISLLYYSQACDEQTKSLYTRYKQSLSKSGWREALLDFGGTMPEVSWPRV
+ SSAEIQRRVLPVNSRSSRIKPASAH"
+ misc_feature complement(658248..>658682)
+ /locus_tag="SARI_00653"
+ /note="Peptidase M35 family; Region: M35_like; cl03449"
+ /db_xref="CDD:243426"
+ misc_feature complement(order(658365..658367,658368..658370,
+ 658389..658391,658398..658403))
+ /locus_tag="SARI_00653"
+ /note="active site"
+ /db_xref="CDD:199911"
+ misc_feature complement(order(658368..658370,658389..658391,
+ 658398..658403))
+ /locus_tag="SARI_00653"
+ /note="Zn binding site [ion binding]; other site"
+ /db_xref="CDD:199911"
+ gene complement(660659..664993)
+ /locus_tag="SARI_00654"
+ CDS complement(660659..664993)
+ /locus_tag="SARI_00654"
+ /inference="protein motif:HMMPfam:IPR003284"
+ /note="'COG: NOG06259 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569720.1"
+ /db_xref="GI:161502608"
+ /db_xref="InterPro:IPR003284"
+ /translation="MGEALGQAGPGGTASMTLPLPVSAGRGFAPSLSLTYSSSAGNSI
+ FGIGWACATLRISRRTSHGVPQYNDNDEFLGPDGEVLVKTISTSQTPNPTTCQQYGST
+ TLTQTWTVTRYQPRTEGAFHRLEHWQSEATDGDFWLLHESTGNLHMLGKTASARISDP
+ HNAAHIAEWLVEESVNPVGDHIYYCWKAENSSNIREIDKTNQRDCSTQRYLASVQYGC
+ QTPASDLYLWKSDKPDARWLFTLIFDYGERSLDPGTAPAFSTTTSWPARQDAFSRYEY
+ GFEIRTHRLCHQVLMFHHFPDELKQDNALVSRLLLEYNETPVLSQLTSAQTLAYDADG
+ SVLSCPPLELCYSQPDISGAQWQQMSSLSGLDSPPYQLVDLYGEGVPGILWLNGKDWR
+ YRAPCRGETGTDEVVYADWVNLPQIPALQNASARLIDIDGDGQLDWVIAAPGMAGFFT
+ QQSDKNWSRFTPFSALPEEFFHPQAQFTQLMGSGLIDLAMIGPKSVRLYANEGSAFST
+ GLNINQDENIELPGPGRDARELVLFADILGSGQSHLCRIRYNSVTCWPNLGGGRFGSP
+ VQLSLPSPLDSEEQFNPENLLLADTDGSGAPDLIYVQHNQAKVWLNQGGNGFVFGSNI
+ AFPDGVVYDRLCQLTVADIQGNGMAELVLTVPWPTPTHWHFAFCAQKPWLLTGTNNNI
+ GANTTLFYRSSAQEWLDEKQQNPQATPALPFAMHLLVKTTTEDEVTGNQLSQSIRYRR
+ GVYDGKEREFRGFGYVETEDTNDDALPVGDDTPVAATLLTKTWFHCGREEDETTLFGT
+ PWRGDTEEITLNATLLTTWQAGEDQVLNNPDKATRWWMFRALKGTALRSETYGLDTSS
+ VASSPYTTTQQRMQVRLVQGGTMPVVLPVALEQITHHYERLAGDPQVSQQVTLQADGY
+ GYVTRQVSIAYPRRAYHALQPYPANLPDDAWENTYDDQQQKLRLVESLASFIHLENSQ
+ TWRLGLPSQQRVNQLEFDSVPAGGISYETLRADNGLLSAEQTRYLTQQNEIIYTSTPL
+ DLRALVHYQRTAVLDETALKAYEGITIPAEYSFDKLGYVNTPALFSFTTEADLWAVEH
+ SFTLYNDVSQFSTVASQQSTRLVGAITCQYDSHYLVPISQQDVLGNTVTMEYDYRFLS
+ PWRTTDINNNYQECQLDALGRLLATSVYGTENGGQAVGFAKIADYPVSSSLTVEQAIA
+ MATTVGYLQQLATINVTDMFSWMGCVSSDQANSVTADGWSTLLKNRFITFTGHIRSSG
+ HLWARKNPQHPLANLLTEATRNPIHSVTLTADNYPATFDPDDSTKRLQQTGISLSYSD
+ GFGRALQQCVLFPDGKAWHRESNGEISTTEVDASPRWAVSGRTEYDNKGQAVRNYQPF
+ FLDDWHYVVDAAMRTNGYSDTHYYDATGRNIRTVTAKGYLRRNTYYAWFTVAEDENDT
+ VGLEDIPV"
+ misc_feature complement(664109..664981)
+ /locus_tag="SARI_00654"
+ /note="Salmonella virulence plasmid 65kDa B protein;
+ Region: SpvB; pfam03534"
+ /db_xref="CDD:217601"
+ misc_feature complement(663035..663226)
+ /locus_tag="SARI_00654"
+ /note="Family description; Region: VCBS; pfam13517"
+ /db_xref="CDD:222190"
+ misc_feature complement(662633..663160)
+ /locus_tag="SARI_00654"
+ /note="Insecticide toxin TcdB middle/N-terminal region;
+ Region: TcdB_toxin_midN; pfam12256"
+ /db_xref="CDD:221493"
+ misc_feature complement(662057..662491)
+ /locus_tag="SARI_00654"
+ /note="Insecticide toxin TcdB middle/C-terminal region;
+ Region: TcdB_toxin_midC; pfam12255"
+ /db_xref="CDD:221492"
+ gene complement(665133..669659)
+ /locus_tag="SARI_00655"
+ CDS complement(665133..669659)
+ /locus_tag="SARI_00655"
+ /inference="similar to AA sequence:REFSEQ:NP_931351.1"
+ /note="'COG: NOG25827 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569721.1"
+ /db_xref="GI:161502609"
+ /translation="MSTTISSELNQGYRSALLAYYIGQYAPNSGDATLSNMIKTSDDV
+ YEYLLIDPLVTNDVQTSRVAQAMSSIQQYINGIALNMEPGYDTQALDTMQLKRWNNGA
+ DQYAVWGGYVELDSYPENYIDPTLRQDKTSCFNDLITELNQKTVSNDTAQQAVMGYLN
+ QFEQVANLTIVSGYTDNKDQTKGTYYLLGKSTSSPVQYYWRSFDMSLNVDNVVASNAW
+ SEWYPVNTSINDDLIQGTPRLAYFNNRLYLFWFERAEGNGPNESDTITAYSSQCDFSR
+ NWSSPSAMMSIDSDTANHHGEQTYCDKLFTSKYLCTACGYNETDNYLLVSLYDGTDVT
+ AYTDNGYNDFTITIDYWFNTEKRESKVSVGMTNTISKFLYNYIESQTITNNQSKIQSC
+ FLVDKFYVADVKCDSTKFYDGLHSYITLPALDTRNFSVNTADDGSITLEGSIITACST
+ NSTGTFYHENWNLNENDGVLDCYYSFTDSIFTGMQLVDLPVTLSATINTVAIEVPYNT
+ GMKTFPLSRSYTIDKGILTDAANFAAEMIVTKAAMTSQGNMQYFHFELRNNNTKVLSI
+ VNNRHIENYYNDTSWTLNVFESKSSGCWQSTNANTCISKTAATINNNTKFNYSVADFT
+ DDEITTGAITRYISVGYINNCGGATTHTEYRVSLQKLTNIPATPLIATRRDEELGTVV
+ FLSFNGTFDDGAAISPVRLNTLFAKELINKANVSIDDLLAWDTQLTLEPAMTSGASPT
+ PMDFYGANGLYFWELFFYMPWLVASRLSQEGNYADAQKWFNYIFDPSACGRINSNADY
+ PEPDYWSVRPLVEANAQESLAALILNPDDPDIIAKADPVHYQKAIAMAYLANLIAAGD
+ AEYRLLTNDGLAQAKLRYVQVKTLLGPRPDTSTLQQWQPDTLKNIASQRNTDLTALED
+ SASISLYAFSGSNTLAQEVTINEAFSLPLNAQLLNYWDVIDSRLYNLRHNLSITGQPI
+ NTPLYATPVNPAMLVQMNATGGSLAGQASKLSMAIPPYRFTAMLQHARGAVGTLSQMG
+ QTLLSYYERKESTGLQELQQQQALDLSSFTISLQKQAIDALKADQKALEASKDIAKQR
+ YDYYYDLYTTGISASEQEVMNMQSSASALLTSAEPFLTTGATLNMAPNIFGVATGGAV
+ WGAALTASGMVLQFSANSIQATAQRIQVSEEYRRRSEEWKQQYQQANAEMTSIDRQLD
+ ALAVRQQAAQTSLQQAQTEQANLQATMQYISSRFTQSSLYSWLIGQLAALYYQAYDAV
+ LSLCLSAEACWQYEMGDLTSRFIQTNAWNDSYHGLLAGETLELNLQQMESAWLSRNQR
+ RLELTKTVSLKTLLGDSDFANLIATGSVNFRLDERLFDNDYPGHYLRQIKFVTLSLPT
+ LLGPWQDVRATLTQTSSSTLLKADIDGVNYLNDNTTGNAANVVTNLRASQQIAISSGM
+ NDSGLFELSFGDERYLPFEGTGAVSSWQLSFPRPKSSEQKAILDNLSDVIVQVHYTAV
+ SGGSDFANTVEKTL"
+ gene complement(669754..674673)
+ /locus_tag="SARI_00656"
+ CDS complement(669754..674673)
+ /locus_tag="SARI_00656"
+ /inference="protein motif:BlastProDom:IPR003518"
+ /inference="protein motif:FPrintScan:IPR003518"
+ /inference="protein motif:Gene3D:IPR013320"
+ /inference="protein motif:HMMPfam:IPR003518"
+ /inference="protein motif:superfamily:IPR008985"
+ /inference="similar to AA sequence:REFSEQ:NP_931352.1"
+ /note="'COG: NOG27507 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569722.1"
+ /db_xref="GI:161502610"
+ /db_xref="InterPro:IPR003518"
+ /db_xref="InterPro:IPR008985"
+ /db_xref="InterPro:IPR013320"
+ /translation="MSITATLSLKKLEEHFGIQNQLSNRGYYSIFDILKLSKSEFTCK
+ HQGLFGAKASKIYDTASGYATQIMLLFRKTYLAQAVQTSVYSTQLQDSNSVVLTKGGP
+ TWQTLFADDWREYCQNGTPEAIDSPVAYLSWLYNQATNFESQMGVDNIIPLAVRRPDL
+ AELMLDNDAINQVVPSLQLVNEVLEQSVTPYVNNVAQNTSVSEMLATTRYPTLLPYHY
+ PHQQALLSLEASDESLQNIIKKTDIAWPYFVKQNLRAGKAETAWQLESNLAPEQRNII
+ IETFADSTTELTNFYHQSLGMNSSSFEQFVNSNIFCQQLSITKEEMENLIASTCNESK
+ VSISDNYQPAYRVSGSDLYGASYINNYLNDSALLQDRSVVKDECTNPIPMYISSQGVS
+ FVTGKFGSALKIDATENAEVYFKSNIATDGSQLIPFTLSFWCNIPADIQSGSLVVTNK
+ TDHYASSAKGITVKAFPDTNGNCSLELSASDGITAPLTVSRIFPTNTWLFVCIEYLPD
+ TNFYFITNVNGSGPTYYDTIKIDAPESIALEEEYWGFNGNYGNKYYKEHSSCRSVILY
+ DDIAVWNKDINDREINSYLSKGTTALALNTPIHYYSCDAAGVSIINETPSKIELSQSQ
+ NDFYPERLFDRYGEYYKLCATKNNYIRLNEAICNQFDGNQNFSFGFWFKYSKLPTDSI
+ PVAMNIYPQSGEHGFSIQLFSSGKLHLVAQNDRNYKYIESDALTTETWYYVALVWCTS
+ TGVATLYLVKEGSSDINVYETDALIAASFTKNGEYYWTLNESGNVNRTWYTTDKNSSV
+ KLCFSEPAFWSGLINQNDVTLIASLQSSLNDKDSGLSLYPACYFNNSTTLMHLSDVRM
+ QRINRMIRLQRWLGLSFEEVDLLLNACIRGQGSQNSDNSLNAQTLRMLGVYRHWQQAY
+ QVTAFQFAAILYQITPYAISPAVPFLDQIFNTTSAFDEPFKITDWAFNYTALTGEDGQ
+ IVKQICAGLNITRAQFLVLAKQVSSAQNCDTNTLICSLDVISALYRLVMAPRWLGLSF
+ EDGVALLMLVEEGNALTRLASIPIYTTVENSASDLLDTLMALADAAQWLADNNLTATW
+ ALAMLQGGEMVLPATTAELNFISGINQQLPSTLLNENYFSSLPQDIISESVYFPNGTD
+ APSSYNNTLSYALNSTKGQYACLSDTANNILDPDSSIASSLGMWCYIKNGASVGAPLI
+ ASATIGSDGNIGTGIAITLGESYKFNICMKDSNGNSAGVSASLARWEKNEAWFYVSIR
+ MPYNNMLYLDIYLDNGTKTYSSVLDYNNMGSCKAEGNCWSINEDGSQAFYSTHQQAKS
+ DIIISDVTVWQKNITPDEFKNIVKSNRPANETVPGGLSFTETTWMESLNNIIDSSGLV
+ LPVATDYQTISNIVHNDLRYGTNETQLDAVSNIIYQAKLAQQNIADSALAKAFDIDHS
+ YPPYLLAWTASSEYDLLSQSLALNGITTPDAIPDEYQQYLYQIARRAGLCSTFNLTPA
+ MLSTLLSHTDWFGVADTTIDFNLLYLFSRYSDWMKLADKEDAMLAYLRRANGAPSLTP
+ DQAASCLALLTDWESDEVLQAAAYANPATGIAATLAHIDVVMRLKTLCTRTGTSVETI
+ LNTGGLTTTSTYQEWQSVGESLVAAQSNN"
+ misc_feature complement(673720..674649)
+ /locus_tag="SARI_00656"
+ /note="Salmonella virulence plasmid 28.1kDa A protein;
+ Region: VRP1; pfam03538"
+ /db_xref="CDD:217604"
+ misc_feature complement(<672430..672738)
+ /locus_tag="SARI_00656"
+ /note="Concanavalin A-like lectin/glucanases superfamily;
+ Region: Laminin_G_3; pfam13385"
+ /db_xref="CDD:222092"
+ gene complement(675073..675900)
+ /locus_tag="SARI_00657"
+ CDS complement(675073..675900)
+ /locus_tag="SARI_00657"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="similar to AA sequence:INSD:"
+ /note="'COG: COG0583 Transcriptional regulator;
+ Psort location: vesicles of secretory system, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569723.1"
+ /db_xref="GI:161502611"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR011991"
+ /translation="MGIFISKKLRYFIAIMEKRSFASASEELCITRSPLSKAITEIEE
+ YLDDKLFVRKHNDLIPTPLALEYYKKCKPLYEELLKLEKIKNLKLYTVIFDSCFPLTF
+ VKFLRDFIEVPGFEFRVEHTIITPEHLLSLKNENKIFISLKNIVDVPDENKSIWPTGG
+ LTLLSPFISKNNNLFVCKEIHINSLKNRFSKTLENYLYSINFIEHNHDPSTLIYKVKS
+ GEGHGLFSSKLAQFYNLNGIKKTPIKEYNKNIVVYHDASDLNSIVLLKIKQILNDFI"
+ misc_feature complement(675709..675882)
+ /locus_tag="SARI_00657"
+ /note="Bacterial regulatory helix-turn-helix protein, lysR
+ family; Region: HTH_1; pfam00126"
+ /db_xref="CDD:215735"
+ misc_feature complement(<675709..675876)
+ /locus_tag="SARI_00657"
+ /note="Transcriptional regulator [Transcription]; Region:
+ LysR; COG0583"
+ /db_xref="CDD:223656"
+ gene complement(676333..676406)
+ /locus_tag="SARI_00658"
+ tRNA complement(676333..676406)
+ /locus_tag="SARI_00658"
+ /product="tRNA-Pro"
+ gene complement(676480..678240)
+ /locus_tag="SARI_00659"
+ CDS complement(676480..678240)
+ /locus_tag="SARI_00659"
+ /inference="protein motif:HMMPfam:IPR000917"
+ /inference="protein motif:HMMPIR:IPR012159"
+ /inference="protein motif:ScanRegExp:IPR010916"
+ /note="'KEGG: aha:AHA_1664 9.5e-104 putative sulfatase;
+ COG: COG3083 Predicted hydrolase of alkaline phosphatase
+ superfamily;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569724.1"
+ /db_xref="GI:161502612"
+ /db_xref="InterPro:IPR000917"
+ /db_xref="InterPro:IPR010916"
+ /db_xref="InterPro:IPR012159"
+ /translation="MVTHRQRYREKVSQMVSWGHWFALFNILLATLLGSRYLFVADWP
+ TTLVGRIYSYLSIVGHFSFLVFATYLLIIFPLTFIVMSQRLMRFLSAILATAGMTLLL
+ IDSEVFTRFHLHLKPIVWELVINPDQNEMARDWQLMFISVPVILLIEMLFATWSWQKL
+ RSLTRRRHFARPLAVFFFVSFIASHLIYIWADANFYRPITMQRANLPLSYPMTARRFL
+ EKHGLLDAQEYQRRLVEQGNPEAVSVQYPLSDLHYRDMGTGQNVLLITVDGLNYSRFE
+ KQMPELAKFAGQNINFTRHMSSGNTTDNGIFGLFYGVSPGYMDGVLSTRTPAALITAL
+ NQQGYQLGLFSSDGFTSPLYRQALLSDFSMPAAQTQSDAQTASQWIDWLGRYAQEDNR
+ WFSWVSFNGTNIDDSNQKNFVKRYASAASGVDAQINRVLNALREAGKLDNTVVIITAG
+ RGIPLTPEENRFAWSRGHLQVPLVIHWPGTPAQRINVLTDHTDVMTTLMQRLLHVSTP
+ ANEYSQGQDIFTVPRRHNWVTAADGSTLAITTPQMTLVLNNNGNYQTYDLHGEQIKDQ
+ KPQLSLLLQVLTDEKRFIAN"
+ misc_feature complement(676483..678240)
+ /locus_tag="SARI_00659"
+ /note="Predicted hydrolase of alkaline phosphatase
+ superfamily [General function prediction only]; Region:
+ COG3083"
+ /db_xref="CDD:225625"
+ misc_feature complement(677479..678240)
+ /locus_tag="SARI_00659"
+ /note="Domain of unknown function (DUF3413); Region:
+ DUF3413; pfam11893"
+ /db_xref="CDD:221295"
+ misc_feature complement(676717..677463)
+ /locus_tag="SARI_00659"
+ /note="Sulfatase; Region: Sulfatase; cl17466"
+ /db_xref="CDD:248020"
+ unsure 677023..677906
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(678272..678499)
+ /locus_tag="SARI_00660"
+ CDS complement(678272..678499)
+ /locus_tag="SARI_00660"
+ /inference="protein motif:HMMPfam:IPR009857"
+ /inference="protein motif:HMMPIR:IPR009857"
+ /inference="similar to AA sequence:INSD:CAD02610.1"
+ /note="'COG: COG3082 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569725.1"
+ /db_xref="GI:161502613"
+ /db_xref="InterPro:IPR009857"
+ /translation="MPQLSRYSDEHVEQLLSDLLSVLEKHKAPTDLSLMVLGNMVTNL
+ INTSVAPAQRQAIANSFTRALQSSISEDKAH"
+ misc_feature complement(678275..678499)
+ /locus_tag="SARI_00660"
+ /note="hypothetical protein; Provisional; Region:
+ PRK13689"
+ /db_xref="CDD:237471"
+ gene complement(678451..678711)
+ /locus_tag="SARI_00662"
+ CDS complement(678451..678711)
+ /locus_tag="SARI_00662"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569726.1"
+ /db_xref="GI:161502615"
+ /translation="MQGNLVDIQTHDKLSFKTGRYSTTACRKTQAIALSFQALSITRM
+ IQGIKMQKKNCCYGNILPFHEQTDFDLCHNSPAIVMNMLNNY"
+ gene 678679..679686
+ /locus_tag="SARI_00661"
+ CDS 678679..679686
+ /locus_tag="SARI_00661"
+ /inference="protein motif:HMMPfam:IPR007358"
+ /inference="similar to AA sequence:INSD:AAO68329.1"
+ /note="'COG: COG3081 Nucleoid-associated protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="nucleoid-associated protein NdpA"
+ /protein_id="YP_001569727.1"
+ /db_xref="GI:161502614"
+ /db_xref="InterPro:IPR007358"
+ /translation="MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTATVVEMVAELH
+ RVYSAKNKAYGLFNEESELAQALRLQRQGEEDFLAFSRAATGRLRDELTKYPFADGGI
+ VLFCHYRYLAVEYLLVAVLNNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETN
+ PESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAE
+ RQNVRRQVYSYCNERLQAGEEIELESLSKELSCVSEVSFSEFTAEKGYELEESFPADR
+ STLRQLTKYAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGG
+ K"
+ misc_feature 678679..679680
+ /locus_tag="SARI_00661"
+ /note="Nucleoid-associated protein [General function
+ prediction only]; Region: COG3081"
+ /db_xref="CDD:225623"
+ misc_feature 678679..679680
+ /locus_tag="SARI_00661"
+ /note="nucleoid-associated protein NdpA; Validated;
+ Region: PRK00378"
+ /db_xref="CDD:178993"
+ gene complement(679844..680128)
+ /locus_tag="SARI_00663"
+ CDS complement(679844..680128)
+ /locus_tag="SARI_00663"
+ /inference="protein motif:BlastProDom:IPR001021"
+ /inference="protein motif:HMMPfam:IPR001021"
+ /inference="protein motif:superfamily:IPR011035"
+ /inference="similar to AA sequence:INSD:AAV76626.1"
+ /note="'the Ctc family of proteins consists of two types,
+ one that contains the N-terminal ribosomal protein L25
+ domain only which in Escherichia coli binds the 5S rRNA
+ while a subset of proteins contain a C-terminal extension
+ that is involved in the stress response'"
+ /codon_start=1
+ /transl_table=11
+ /product="50S ribosomal protein L25"
+ /protein_id="YP_001569728.1"
+ /db_xref="GI:161502616"
+ /db_xref="InterPro:IPR001021"
+ /db_xref="InterPro:IPR011035"
+ /translation="MFTINAEVRKEQGKGASRRLRAANKFPAIIYGGSEAPIAIELDH
+ DKVMNMQAKAEFYSEVLTLVVDGKEVKVKAQAVQRHAFKPKLTHIDFIRA"
+ misc_feature complement(679850..680122)
+ /locus_tag="SARI_00663"
+ /note="Ribosomal L25/TL5/CTC N-terminal 5S rRNA binding
+ domain; Region: Ribosomal_L25_TL5_CTC; cd00495"
+ /db_xref="CDD:198379"
+ misc_feature complement(order(679853..679855,679859..679861,
+ 679865..679867,679895..679897,679901..679906,
+ 680018..680020,680030..680038,680066..680068,
+ 680072..680080,680102..680104))
+ /locus_tag="SARI_00663"
+ /note="5S rRNA interface [nucleotide binding]; other site"
+ /db_xref="CDD:198379"
+ misc_feature complement(order(679850..679855,679904..679906,
+ 679916..679918,679952..679954,680030..680032))
+ /locus_tag="SARI_00663"
+ /note="CTC domain interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:198379"
+ misc_feature complement(order(679853..679855,679877..679879,
+ 679898..679900,679907..679912))
+ /locus_tag="SARI_00663"
+ /note="L16 interface [polypeptide binding]; other site"
+ /db_xref="CDD:198379"
+ gene complement(680253..682013)
+ /locus_tag="SARI_00664"
+ CDS complement(680253..682013)
+ /locus_tag="SARI_00664"
+ /inference="protein motif:HMMPfam:IPR001650"
+ /inference="protein motif:HMMPfam:IPR006935"
+ /inference="protein motif:HMMSmart:IPR001650"
+ /inference="protein motif:HMMSmart:IPR014001"
+ /note="'KEGG: eci:UTI89_C2461 0. yejH; hypothetical
+ protein YejH K01529;
+ COG: COG1061 DNA or RNA helicases of superfamily II;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569729.1"
+ /db_xref="GI:161502617"
+ /db_xref="InterPro:IPR001650"
+ /db_xref="InterPro:IPR006935"
+ /db_xref="InterPro:IPR014001"
+ /translation="MIFTLRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAEL
+ ARVARGRVLVLAHVKELVAQNHAKYCALGLEADIFAAGLKRKESQGKVVFGSVQSVAR
+ NLDAFKGEFSLLIVDECHRIGDDEDSQYQQILTHLSKVNPHLRLLGLTATPFRLGKGW
+ IYQFHYHGMVRGNDNALFRDCIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQS
+ NGLFSEADLNRELKKQQRITPHIISQIMEFAQGRKGVMIFAATVEHAKEIVGLLPADD
+ AALITGDTPGPKRDVLIDNFKAQRFRYLVNVSVLTTGFDAPHVDLIAILRPTESVSLY
+ QQIVGRGLRLAPGKTDCLILDYAGNPHDLYAPEVGSPKGKSDNVPVQVFCPACGFANT
+ FWGKTTADGTLIEHFGRRCQGWFDDDDGHREQCDFRFRFKNCPQCNAENDIAARRCRE
+ CDAILVDPDDMLKAALRLKDALVLRCSGMTMQHGQDEKGEWLKITYYDEDGADVSERF
+ RLHTPAQRTAFEQLFIRPHTRTPGVPLRWITAADIVAQQALLRHPDFVVARMKGQYRQ
+ VREKVFDYEGRFRRAHELRG"
+ misc_feature complement(680922..682013)
+ /locus_tag="SARI_00664"
+ /note="DNA or RNA helicases of superfamily II
+ [Transcription / DNA replication, recombination, and
+ repair]; Region: SSL2; COG1061"
+ /db_xref="CDD:223989"
+ misc_feature complement(681555..681932)
+ /locus_tag="SARI_00664"
+ /note="DEAD-like helicases superfamily. A diverse family
+ of proteins involved in ATP-dependent RNA or DNA
+ unwinding. This domain contains the ATP-binding region;
+ Region: DEXDc; cd00046"
+ /db_xref="CDD:238005"
+ misc_feature complement(681900..681914)
+ /locus_tag="SARI_00664"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238005"
+ misc_feature complement(681654..681665)
+ /locus_tag="SARI_00664"
+ /note="putative Mg++ binding site [ion binding]; other
+ site"
+ /db_xref="CDD:238005"
+ misc_feature complement(680994..681293)
+ /locus_tag="SARI_00664"
+ /note="Helicase superfamily c-terminal domain; associated
+ with DEXDc-, DEAD-, and DEAH-box proteins, yeast
+ initiation factor 4A, Ski2p, and Hepatitis C virus NS3
+ helicases; this domain is found in a wide variety of
+ helicases and helicase related proteins; may...; Region:
+ HELICc; cd00079"
+ /db_xref="CDD:238034"
+ misc_feature complement(order(681087..681095,681168..681173,
+ 681225..681236))
+ /locus_tag="SARI_00664"
+ /note="nucleotide binding region [chemical binding]; other
+ site"
+ /db_xref="CDD:238034"
+ misc_feature complement(order(680994..680996,681006..681008,
+ 681069..681071))
+ /locus_tag="SARI_00664"
+ /note="ATP-binding site [chemical binding]; other site"
+ /db_xref="CDD:238034"
+ unsure 681538..682412
+ /note="Sequence derived from one plasmid subclone"
+ gene 682165..682860
+ /locus_tag="SARI_00665"
+ CDS 682165..682860
+ /locus_tag="SARI_00665"
+ /inference="protein motif:HMMPfam:IPR002942"
+ /inference="protein motif:HMMPfam:IPR006145"
+ /inference="protein motif:HMMSmart:IPR002942"
+ /inference="protein motif:HMMTigr:IPR000748"
+ /inference="protein motif:ScanRegExp:IPR000748"
+ /inference="similar to AA sequence:INSD:AAV76628.1"
+ /note="catalyzes the synthesis pseudouridine from
+ uracil-516 in 16S ribosomal RNA"
+ /codon_start=1
+ /transl_table=11
+ /product="16S rRNA pseudouridylate synthase A"
+ /protein_id="YP_001569730.1"
+ /db_xref="GI:161502618"
+ /db_xref="InterPro:IPR000748"
+ /db_xref="InterPro:IPR002942"
+ /db_xref="InterPro:IPR006145"
+ /translation="MRLDKFIAQQLGVSRAIAGREIRGNRVTVDGDIIKNAAFKLLPE
+ HAVAYDGNPLAQQHGPRYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAYKLHAAGRLD
+ IDTTGLVLMTDDGQWSHRITSPRHHCEKTYLVTLESPVTDDTAAQFAKGVQLHNEKEL
+ TKPATLEVVTPVQVRLTISEGRYHQVKRMFAAVGNHVVELHRERIGAITLDEDLAPGE
+ YRPLTEEEIASVG"
+ misc_feature 682165..682857
+ /locus_tag="SARI_00665"
+ /note="16S rRNA pseudouridylate synthase A; Provisional;
+ Region: PRK10839"
+ /db_xref="CDD:236774"
+ misc_feature 682165..682362
+ /locus_tag="SARI_00665"
+ /note="S4/Hsp/ tRNA synthetase RNA-binding domain; The
+ domain surface is populated by conserved, charged residues
+ that define a likely RNA-binding site; Found in stress
+ proteins, ribosomal proteins and tRNA synthetases; This
+ may imply a hitherto unrecognized...; Region: S4; cd00165"
+ /db_xref="CDD:238095"
+ misc_feature order(682168..682170,682204..682206,682210..682215,
+ 682219..682224,682231..682236,682240..682242,
+ 682261..682284,682288..682290)
+ /locus_tag="SARI_00665"
+ /note="RNA binding surface [nucleotide binding]; other
+ site"
+ /db_xref="CDD:238095"
+ misc_feature 682345..682845
+ /locus_tag="SARI_00665"
+ /note="Pseudouridine synthase, Escherichia coli RsuA like;
+ Region: PseudoU_synth_RsuA; cd02553"
+ /db_xref="CDD:211327"
+ misc_feature order(682459..682470,682723..682725)
+ /locus_tag="SARI_00665"
+ /note="active site"
+ /db_xref="CDD:211327"
+ misc_feature order(682558..682560,682714..682725)
+ /locus_tag="SARI_00665"
+ /note="uracil binding [chemical binding]; other site"
+ /db_xref="CDD:211327"
+ gene 682888..684078
+ /locus_tag="SARI_00666"
+ CDS 682888..684078
+ /locus_tag="SARI_00666"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="protein motif:HMMTigr:IPR004734"
+ /inference="protein motif:HMMTigr:IPR004812"
+ /inference="similar to AA sequence:REFSEQ:YP_217225.1"
+ /note="Involved in sulfonamide (sulfathiazole) and
+ bicyclomycin resistance"
+ /codon_start=1
+ /transl_table=11
+ /product="bicyclomycin/multidrug efflux system"
+ /protein_id="YP_001569731.1"
+ /db_xref="GI:161502619"
+ /db_xref="InterPro:IPR004734"
+ /db_xref="InterPro:IPR004812"
+ /db_xref="InterPro:IPR011701"
+ /translation="MTTRQHSSFAIVFILGLLAMLMPLSIDMYLPALPVISEQFGVPA
+ GSAQLTLSTYILGFALGQLIYGPMADSLGRKPVILGGTLVFAAAAVACALAQTNDQLI
+ VMRFFHGLAAAAASVVINALMRDIYPKEEFSRMMSFVMLVTTIAPLMAPIIGGWVLVW
+ LSWHYIFWILAIAAILASVMIFALIKETLPVERRQSFHIRTIIGNFAALFRHKRVLSY
+ MLASGFSFAGMFSFLSAGPFVYIEINHVPPQDFGYYFALNIIFLFVMTFINSRFVRRV
+ GAQNMFRAGLWIQFAMAAWMVFSALMGIGFWALVVGVAAFVGCVSMVSSNAMAVILDE
+ FPHMAGTASSLAGTFRFGIGAIVGALLSLATFTSAWPMIWSIALCATCSILFYLHASR
+ PKKR"
+ misc_feature 682921..684051
+ /locus_tag="SARI_00666"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature 682945..684075
+ /locus_tag="SARI_00666"
+ /note="bicyclomycin/multidrug efflux system; Provisional;
+ Region: PRK11102"
+ /db_xref="CDD:182964"
+ misc_feature order(682963..682965,682972..682980,682984..682989,
+ 683038..683040,683047..683052,683059..683061,
+ 683071..683076,683080..683085,683221..683226,
+ 683233..683238,683245..683250,683257..683259,
+ 683293..683298,683305..683310,683326..683328,
+ 683563..683565,683572..683577,683584..683589,
+ 683596..683598,683638..683640,683650..683652,
+ 683662..683664,683671..683673,683683..683685,
+ 683836..683838,683845..683850,683857..683859,
+ 683869..683874,683881..683883,683911..683916,
+ 683923..683928,683935..683940,683947..683949)
+ /locus_tag="SARI_00666"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene 684457..684801
+ /locus_tag="SARI_00667"
+ CDS 684457..684801
+ /locus_tag="SARI_00667"
+ /inference="similar to AA sequence:REFSEQ:NP_456777.1"
+ /note="'COG: NOG14216 non supervised orthologous group;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569732.1"
+ /db_xref="GI:161502620"
+ /translation="MNTLQLSIVHRLPQNYRWSTGFAGSKVEPIPQNGQSIENSLVAL
+ KLLSPAGDSAWSVMHKLSQALSDIEVPCSVLECEGEPCLFVNRQDEFAATCRLKNFGV
+ AIAEPFSNNNPF"
+ misc_feature 684457..684798
+ /locus_tag="SARI_00667"
+ /note="hypothetical protein; Provisional; Region:
+ PRK11835"
+ /db_xref="CDD:183333"
+ gene complement(684805..686394)
+ /locus_tag="SARI_00668"
+ CDS complement(684805..686394)
+ /locus_tag="SARI_00668"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMPfam:IPR013563"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:INSD:CAD02601.1"
+ /note="'KEGG: pen:PSEEN3568 8.2e-153 ABC transporter,
+ ATP-binding protein;
+ COG: COG4172 ABC-type uncharacterized transport system,
+ duplicated ATPase component;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569733.1"
+ /db_xref="GI:161502621"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR013563"
+ /translation="MTSPLLAIENLSVGFRQQQNVRPVVNAISLQVNAGETLALVGES
+ GSGKSVTALSILRLLPTPPVVYLSGDIRFHGESLLHASEQTLRGVRGNRIAMIFQEPM
+ VSLNPLHTLEKQLYEVLSLHRGMRREAARAEMISCLDRVGIRKASERLRDYPHQLSGG
+ ERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILHLLRELQRELNMGLLFITHNLS
+ IVKKLADSVAVMQHGQCVEYQRADTLLSAPTHPYTQKLLNSEPTGDPVPLPAGQPPLL
+ EVDRLRVAFPIRKGILKRIVDHNVVVNNISFTLHPGETLGLVGESGSGKSTTGLALLR
+ LIHSEGRIVFDGLSLGTLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRLH
+ QPTLSGAQREQQVKAVMMEVGLDPETRHRYPAEFSGGQRQRIAVARALILKPSLIILD
+ EPTSSLDKTVQAQILSLLKSLQQKHRLAYVFISHDLHVVRALCHQVIVLRQGEVIEQG
+ QCERVFTAPQQAYTRQLLALS"
+ misc_feature complement(684808..686394)
+ /locus_tag="SARI_00668"
+ /note="microcin C ABC transporter ATP-binding protein
+ YejF; Provisional; Region: PRK15134"
+ /db_xref="CDD:237917"
+ misc_feature complement(685681..686382)
+ /locus_tag="SARI_00668"
+ /note="ATP-binding cassette domain of nickel/oligopeptides
+ specific transporters; Region: ABC_NikE_OppD_transporters;
+ cd03257"
+ /db_xref="CDD:213224"
+ misc_feature complement(686248..686271)
+ /locus_tag="SARI_00668"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(order(685750..685752,685849..685854,
+ 686098..686100,686245..686253,686257..686262))
+ /locus_tag="SARI_00668"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(686098..686109)
+ /locus_tag="SARI_00668"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(685897..685926)
+ /locus_tag="SARI_00668"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(685849..685866)
+ /locus_tag="SARI_00668"
+ /note="Walker B; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(685831..685842)
+ /locus_tag="SARI_00668"
+ /note="D-loop; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(685744..685764)
+ /locus_tag="SARI_00668"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(<685564..685689)
+ /locus_tag="SARI_00668"
+ /note="Oligopeptide/dipeptide transporter, C-terminal
+ region; Region: oligo_HPY; pfam08352"
+ /db_xref="CDD:219806"
+ misc_feature complement(684871..685572)
+ /locus_tag="SARI_00668"
+ /note="ATP-binding cassette domain of nickel/oligopeptides
+ specific transporters; Region: ABC_NikE_OppD_transporters;
+ cd03257"
+ /db_xref="CDD:213224"
+ misc_feature complement(685417..685440)
+ /locus_tag="SARI_00668"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(order(684943..684945,685042..685047,
+ 685288..685290,685414..685422,685426..685431))
+ /locus_tag="SARI_00668"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(685288..685299)
+ /locus_tag="SARI_00668"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(685090..685119)
+ /locus_tag="SARI_00668"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(685042..685059)
+ /locus_tag="SARI_00668"
+ /note="Walker B; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(685024..685035)
+ /locus_tag="SARI_00668"
+ /note="D-loop; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(684937..684957)
+ /locus_tag="SARI_00668"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213224"
+ gene complement(686396..687421)
+ /locus_tag="SARI_00669"
+ CDS complement(686396..687421)
+ /locus_tag="SARI_00669"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="similar to AA sequence:REFSEQ:NP_456775.1"
+ /note="'KEGG: syf:Synpcc7942_2454 4.3e-05 adenine
+ phosphoribosyltransferase K00759;
+ COG: COG4239 ABC-type uncharacterized transport system,
+ permease component;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569734.1"
+ /db_xref="GI:161502622"
+ /db_xref="InterPro:IPR000515"
+ /translation="MPRLSPVNQARWARFRHNRRGYWSLWIFLVVFSLSLCAELIAND
+ KPLLVRYEGQWYFPLVKNYSERDFGGPLATTADYQDPWLQRQLENRGWALWAPVRFGA
+ NTINFSTTQPFPSPPSAKNWLGTDANGGDVFARILYGTRISILFGLMLTICSSVMGVL
+ AGALQGYYGGKVDLWGQRLIEVWSGMPTLFLIILLSSVVQPNFWWLLAITVLFGWMSL
+ VGVVRAEFLRTRNFDYIRAAQALGVSDRDIILRHMLPNAMVATLTFLPFILCSSITTL
+ TSLDFLGFGLPLGSPSLGELLLQGKNNLQAPWLGIAAFLSVAILLSLLIFIGEAVRDA
+ FDPARAV"
+ misc_feature complement(686399..687421)
+ /locus_tag="SARI_00669"
+ /note="microcin C ABC transporter permease; Provisional;
+ Region: PRK15021"
+ /db_xref="CDD:184982"
+ misc_feature complement(<686600..687001)
+ /locus_tag="SARI_00669"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(686600..686602,686621..686623,
+ 686630..686635,686675..686677,686726..686728,
+ 686735..686740,686750..686752,686756..686761,
+ 686768..686770,686774..686776,686780..686785,
+ 686834..686836,686840..686845,686852..686881,
+ 686885..686896,686924..686926,686939..686944,
+ 686951..686956))
+ /locus_tag="SARI_00669"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(686600..686602,686834..686878))
+ /locus_tag="SARI_00669"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(686654..686656,686666..686671,
+ 686687..686725))
+ /locus_tag="SARI_00669"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene complement(687421..688515)
+ /locus_tag="SARI_00670"
+ CDS complement(687421..688515)
+ /locus_tag="SARI_00670"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="similar to AA sequence:INSD:CAD02599.1"
+ /note="'KEGG: syf:Synpcc7942_2454 1.5e-32 adenine
+ phosphoribosyltransferase K00759;
+ COG: COG4174 ABC-type uncharacterized transport system,
+ permease component;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569735.1"
+ /db_xref="GI:161502623"
+ /db_xref="InterPro:IPR000515"
+ /translation="MGAYLIRRLLLVIPTLWAIITINFFIVQIAPGGPIDQAIAAIEF
+ GQGGALPGAGGEGVRASHAQTGVGNISDSHYRGGRGLDPEVIAEITHRYGFDKPLHER
+ YFKMLRDYLSFDFGDSLFRSASVLTLIKDSLPVSITLGLWSTLIIYLVSIPLGIRKAV
+ HNGSRFDVWSSAFIIIGYAIPAFLFAILLIVFFAGGSYYDIFPLRGLVSANFDTLPWY
+ QKITDYLWHITLPVLATVIGGFAALTMLTKNSFLDEVRKQYVVTARAKGVSEKNILWK
+ HVFRNAMLLVIAGFPATFISMFFTGSLLIEVMFSLNGLGLLGYEATVSRDYPVMFGTL
+ YIFTLIGLLLNILSDISYTLVDPRIDFEGR"
+ misc_feature complement(687424..688515)
+ /locus_tag="SARI_00670"
+ /note="ABC-type uncharacterized transport system, permease
+ component [General function prediction only]; Region:
+ COG4174"
+ /db_xref="CDD:226642"
+ misc_feature complement(687466..688119)
+ /locus_tag="SARI_00670"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(687466..687471,687478..687483,
+ 687490..687495,687499..687504,687511..687516,
+ 687550..687555,687592..687597,687604..687615,
+ 687640..687642,687649..687654,687694..687696,
+ 687745..687747,687754..687759,687769..687771,
+ 687775..687780,687787..687789,687793..687795,
+ 687799..687804,687901..687903,687907..687912,
+ 687964..687993,687997..688008,688036..688038,
+ 688054..688059,688066..688071))
+ /locus_tag="SARI_00670"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(687598..687615,687901..687915,
+ 687961..687990))
+ /locus_tag="SARI_00670"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(687514..687516,687550..687552,
+ 687559..687561,687595..687597,687817..687819,
+ 687901..687903))
+ /locus_tag="SARI_00670"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(687673..687675,687685..687690,
+ 687706..687744))
+ /locus_tag="SARI_00670"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene complement(688525..690330)
+ /locus_tag="SARI_00671"
+ CDS complement(688525..690330)
+ /locus_tag="SARI_00671"
+ /inference="protein motif:HMMPfam:IPR000914"
+ /note="'COG: COG4166 ABC-type oligopeptide transport
+ system, periplasmic component;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569736.1"
+ /db_xref="GI:161502624"
+ /db_xref="InterPro:IPR000914"
+ /translation="MIARVMLLLVALVSAGAQAQAIKESDAFAVLGEPKYAFNFDHFD
+ YVNPAAPKGGQMTLSAIGTFDNFNRYSLRGNPGVRTEALYDTLFTTSDDEPGSYYPLI
+ ADHARYAADYSWVEITINPRARFHDGTPITARDVAFTFHKFMTEGVPQFRLVYKGTTV
+ KAIAPLTVRIELAKPGKEDMLSLFSLPIMPEKFWKNHKLSDPLSTPPLASGPYRITQW
+ KMGQYIVYSRVKNYWAANLPVNRGRFNLDTIRYDYYLDDNVAFEAFKAGAFDLRLEND
+ AKNWATRYIGKNFDNHYIIKEEQKNESAQDTRWLAFNIQRPVFKDRRVREAVTLAFDF
+ EWMNKALFYSAWSRTNSYFQNTEYAARNYPDADELALLAPMKKDLPPEVFTQIYQPPV
+ SNGDGYDRENLLKADALLTQTGWVINGQQRVNSVTGKPLTFELLLPASSNSQWVLPFQ
+ HNLQRLGITMTIRQVDNSQLTNRMRSRDYDMMPRLWRAMPWPSSDLQISWTSEYINSS
+ YNAPGVQSPVVDKLIAQIIAAQGDKAELVPLGRALDRVLTWNYYMLPMWYMAQDRLAW
+ WDKFSHPAIRPVYTIGLDTWWYDVNKAAKLPAARR"
+ misc_feature complement(688549..690330)
+ /locus_tag="SARI_00671"
+ /note="ABC-type oligopeptide transport system, periplasmic
+ component [Amino acid transport and metabolism]; Region:
+ OppA; COG4166"
+ /db_xref="CDD:226636"
+ misc_feature complement(688612..690216)
+ /locus_tag="SARI_00671"
+ /note="The substrate-binding component of an
+ uncharacterized ABC-type
+ nickel/dipeptide/oligopeptide-like import system contains
+ the type 2 periplasmic binding fold; Region:
+ PBP2_NikA_DppA_OppA_like_14; cd08497"
+ /db_xref="CDD:173862"
+ gene complement(690437..691933)
+ /locus_tag="SARI_00672"
+ CDS complement(690437..691933)
+ /locus_tag="SARI_00672"
+ /inference="protein motif:HMMPfam:IPR001633"
+ /inference="protein motif:HMMSmart:IPR001633"
+ /inference="similar to AA sequence:REFSEQ:YP_217218.1"
+ /note="'KEGG: vfi:VF0494 3.4e-33 sensory transduction
+ protein kinase;
+ COG: COG2200 FOG: EAL domain;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569737.1"
+ /db_xref="GI:161502625"
+ /db_xref="InterPro:IPR001633"
+ /translation="MAAALLVGSLQFFLSLHKRDVKYNTLLSDVQHYLISYFADLKAT
+ TDILQPLTINTCQQVGAELTSKAAFSLNVRAFLLIKDKKVFCSSATGVMNMPLQQLVP
+ EIDIRKDVDMAILPGTPMMPNKPAMVIWYRNPLLNDSGVFTSLNINLTPYLLYTTRQD
+ DFNGIALIVGKTALSTFSSRLMTVAELPGTPSRQAIIGGMPLRIQLYADSWTYNDVWY
+ ASMLGCISGIVAGFICYLIYALRTRPGKEILTAIKHEQFYVVYQPVVDTRTLSVTGLE
+ VLLRWRHPTAGEIPPDAFIHYAEAQQLIVPLTQHLFELIARDAPTLQKIMPVGAKFGI
+ NIAPEHLHSDCFKEDMHRLRNALPTRHFHIVLEITERDMLQQHEAAKLFEWLHSAGFE
+ IAVDDFGTGHSALIYLERFTLDYLKIDRGFIQAIGTETVTSPVLDTVLTLSKRLNMLT
+ VAEGVETPEQARWLRDHGVNYLQGYWISRPLPLKDFVLWMSAPSVPEW"
+ misc_feature complement(690440..691933)
+ /locus_tag="SARI_00672"
+ /note="phage resistance protein; Provisional; Region:
+ PRK10551"
+ /db_xref="CDD:182541"
+ misc_feature complement(691259..691885)
+ /locus_tag="SARI_00672"
+ /note="CSS motif domain associated with EAL; Region:
+ CSS-motif; pfam12792"
+ /db_xref="CDD:221774"
+ misc_feature complement(690479..691195)
+ /locus_tag="SARI_00672"
+ /note="EAL domain. This domain is found in diverse
+ bacterial signaling proteins. It is called EAL after its
+ conserved residues and is also known as domain of unknown
+ function 2 (DUF2). The EAL domain has been shown to
+ stimulate degradation of a second...; Region: EAL;
+ cd01948"
+ /db_xref="CDD:238923"
+ gene complement(692319..692891)
+ /gene="spr"
+ /locus_tag="SARI_00673"
+ CDS complement(692319..692891)
+ /gene="spr"
+ /locus_tag="SARI_00673"
+ /inference="protein motif:HMMPfam:IPR000064"
+ /inference="similar to AA sequence:INSD:AAV76637.1"
+ /note="'by similarity, Spr seems to have peptidase
+ activity; involved in thermoresistance'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative outer membrane lipoprotein"
+ /protein_id="YP_001569738.1"
+ /db_xref="GI:161502626"
+ /db_xref="InterPro:IPR000064"
+ /translation="MVKSQPILRYILRGIPAIAVAVLLSACSTTTNTAKNMHSETHAV
+ GNSDSSSLQASQDEFENMVRNLDVKSRIMDQYADWKGVRYRLGGSTKKGVDCSSFVQR
+ TFREQFGLELPRSTYEQQEMGKAVSRNNLRTGDLVLFRAGSTGRHVGIYIGNNQFVHA
+ STSSGVIISSMNEPYWKKRYNEARRVLSRS"
+ misc_feature complement(692322..692888)
+ /gene="spr"
+ /locus_tag="SARI_00673"
+ /note="outer membrane lipoprotein; Provisional; Region:
+ spr; PRK10838"
+ /db_xref="CDD:236773"
+ misc_feature complement(692337..692651)
+ /gene="spr"
+ /locus_tag="SARI_00673"
+ /note="NlpC/P60 family; Region: NLPC_P60; pfam00877"
+ /db_xref="CDD:189752"
+ gene complement(693304..694023)
+ /locus_tag="SARI_00674"
+ CDS complement(693304..694023)
+ /locus_tag="SARI_00674"
+ /inference="protein motif:HMMPfam:IPR000326"
+ /inference="protein motif:HMMSmart:IPR000326"
+ /inference="protein motif:superfamily:IPR008934"
+ /inference="similar to AA sequence:INSD:AAL21116.1"
+ /note="'KEGG: eci:UTI89_C2451 7.6e-102 hypothetical
+ protein K01094;
+ COG: COG0671 Membrane-associated phospholipid phosphatase;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569739.1"
+ /db_xref="GI:161502627"
+ /db_xref="InterPro:IPR000326"
+ /db_xref="InterPro:IPR008934"
+ /translation="MTMKTRYPLIILLNAAGLALFLSWYLPVNHGFWFPIDSGIFHFF
+ NQKLVESRAFLWWVAITNNRAFDGCSLLAMGGLMLSFWLKENTSGRRRIVIIGLVMLL
+ TAVVLNQLGQALIPVKRASPTLSFEHIYRVSELLHIPTKDASKDSFPGDHGMMLLIFS
+ AFMLRYFGKMAGIIALIIFVVFAFPRVMIGAHWFTDIVVGSLTVILIGLPWWLMTPLS
+ DRAIALFENYLPGGNKQISNK"
+ misc_feature complement(693322..693951)
+ /locus_tag="SARI_00674"
+ /note="Membrane-associated phospholipid phosphatase [Lipid
+ metabolism]; Region: PgpB; COG0671"
+ /db_xref="CDD:223743"
+ misc_feature complement(693388..693756)
+ /locus_tag="SARI_00674"
+ /note="PAP2_like proteins, a super-family of histidine
+ phosphatases and vanadium haloperoxidases, includes type 2
+ phosphatidic acid phosphatase or lipid phosphate
+ phosphatase (LPP), Glucose-6-phosphatase,
+ Phosphatidylglycerophosphatase B and bacterial acid...;
+ Region: PAP2_like; cd01610"
+ /db_xref="CDD:238813"
+ misc_feature complement(order(693436..693438,693448..693450,
+ 693466..693468,693568..693576,693667..693669,
+ 693688..693690))
+ /locus_tag="SARI_00674"
+ /note="active site"
+ /db_xref="CDD:238813"
+ gene complement(694052..695065)
+ /locus_tag="SARI_00675"
+ CDS complement(694052..695065)
+ /locus_tag="SARI_00675"
+ /inference="protein motif:HMMPfam:IPR003495"
+ /inference="protein motif:HMMPfam:IPR011629"
+ /inference="similar to AA sequence:INSD:CAD02594.1"
+ /note="'KEGG: reh:H16_A3373 3.2e-16 putative GTPase (G3E
+ family);
+ COG: COG0523 Putative GTPases (G3E family);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569740.1"
+ /db_xref="GI:161502628"
+ /db_xref="InterPro:IPR003495"
+ /db_xref="InterPro:IPR011629"
+ /translation="MLYQYPGADVTKTNLITGFLGSGKTTSILHLLAYKDPAEKWAVL
+ VNEFGEVGIDGALLADSGALLKEIPGGCMCCVNGLPMQVGLNTLLRQGKPDRLLIEPT
+ GLGHPKQILDLLTAPVYEPWIDLRATLCILDPRLLLDEQIVVNENFRDQLASADIIIA
+ NKADRATTQSDAALQQWWRQYGGDRQLVHAKHGQIDGKLLDLPRQNLAELPASAAHSH
+ THASKKGLAALNLPAQQRWRRSLNSGQGHQACGWIFDADTVFDTIGLLEWARLAPVGR
+ VKGVMRIKEGLVRINRQGDDLHIETQSVAPPDSRVELISNTETDWNVLQTALLKLRLA
+ MHA"
+ misc_feature complement(694055..695035)
+ /locus_tag="SARI_00675"
+ /note="Putative GTPases (G3E family) [General function
+ prediction only]; Region: COG0523"
+ /db_xref="CDD:223597"
+ misc_feature complement(694565..695023)
+ /locus_tag="SARI_00675"
+ /note="CobW/HypB/UreG, nucleotide-binding domain; Region:
+ cobW; pfam02492"
+ /db_xref="CDD:217066"
+ misc_feature complement(694073..694318)
+ /locus_tag="SARI_00675"
+ /note="Cobalamin synthesis protein cobW C-terminal domain;
+ Region: CobW_C; smart00833"
+ /db_xref="CDD:214844"
+ unsure 694845..694929
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(695669..696241)
+ /locus_tag="SARI_00676"
+ CDS complement(695669..696241)
+ /locus_tag="SARI_00676"
+ /inference="protein motif:Gene3D:IPR012340"
+ /inference="protein motif:HMMPfam:IPR001059"
+ /inference="protein motif:HMMPfam:IPR013185"
+ /inference="protein motif:HMMPIR:IPR011768"
+ /inference="protein motif:HMMTigr:IPR011897"
+ /inference="protein motif:ScanRegExp:IPR013852"
+ /inference="protein motif:superfamily:IPR008991"
+ /inference="protein motif:superfamily:IPR008994"
+ /inference="similar to AA sequence:REFSEQ:NP_804496.1"
+ /note="'Stimulates the peptidyltransferase activity of the
+ 70S ribosome and enhances dipeptide synthesis with
+ N-formylmethionyl-tRNA and puromycin in vitro, suggesting
+ its involvement in the formation of the first peptide bond
+ of a protein'"
+ /codon_start=1
+ /transl_table=11
+ /product="elongation factor P"
+ /protein_id="YP_001569741.1"
+ /db_xref="GI:161502629"
+ /db_xref="InterPro:IPR001059"
+ /db_xref="InterPro:IPR008991"
+ /db_xref="InterPro:IPR008994"
+ /db_xref="InterPro:IPR011768"
+ /db_xref="InterPro:IPR011897"
+ /db_xref="InterPro:IPR012340"
+ /db_xref="InterPro:IPR013185"
+ /db_xref="InterPro:IPR013852"
+ /translation="MPRANEIKKGMVLNYNGKLLIVKDIDIQSPTARGAATLYKMRFS
+ DVRTGLKVEERFKGDDIVDTVTLSRRGVDFSYVDGNEYVFMDKEDYTPYTFTKDQIEE
+ ELLFMPEGGMPDMQVLTWDGQLLALELPQTVDLEIVETAPGIKGASASARNKPATLST
+ GLVIQVPEYLSAGEKIRIHIEERRYMGRAD"
+ misc_feature complement(695672..696241)
+ /locus_tag="SARI_00676"
+ /note="elongation factor P; Provisional; Region: PRK04542"
+ /db_xref="CDD:179863"
+ misc_feature complement(696056..696235)
+ /locus_tag="SARI_00676"
+ /note="Elongation factor P (EF-P) KOW-like domain; Region:
+ EFP_N; pfam08207"
+ /db_xref="CDD:203876"
+ misc_feature complement(695852..696037)
+ /locus_tag="SARI_00676"
+ /note="S1_EF-P_repeat_1: Translation elongation factor P
+ (EF-P), S1-like RNA-binding domain, repeat 1. EF-P
+ stimulates the peptidyltransferase activity in the
+ prokaryotic 70S ribosome. EF-P enhances the synthesis of
+ certain dipeptides with...; Region: S1_EF-P_repeat_1;
+ cd04470"
+ /db_xref="CDD:239916"
+ misc_feature complement(order(695870..695875,695888..695890,
+ 695969..695971))
+ /locus_tag="SARI_00676"
+ /note="RNA binding site [nucleotide binding]; other site"
+ /db_xref="CDD:239916"
+ misc_feature complement(695678..695845)
+ /locus_tag="SARI_00676"
+ /note="S1_EF-P_repeat_2: Translation elongation factor P
+ (EF-P), S1-like RNA-binding domain, repeat 1. EF-P
+ stimulates the peptidyltransferase activity in the
+ prokaryotic 70S ribosome. EF-P enhances the synthesis of
+ certain dipeptides with...; Region: S1_EF-P_repeat_2;
+ cd05794"
+ /db_xref="CDD:240220"
+ misc_feature complement(order(695687..695692,695705..695707,
+ 695756..695758))
+ /locus_tag="SARI_00676"
+ /note="RNA binding site [nucleotide binding]; other site"
+ /db_xref="CDD:240220"
+ gene 697327..698010
+ /locus_tag="SARI_00677"
+ CDS 697327..698010
+ /locus_tag="SARI_00677"
+ /inference="similar to AA sequence:INSD:AAL21112.1"
+ /note="'COG: NOG23005 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569742.1"
+ /db_xref="GI:161502630"
+ /translation="MQGENSEIDLVDISLFLIRNWLSIVMTTFIFVVMGYVFVSVQHD
+ TKIVSIKIKPNLDTPATYALCGYVNDIQCKTTVILNRFSRFLPADYKNKISFEAKNQL
+ ILFKAQGRKESVNNIISALKNSVDKMAVWYIDDGDIKRYSLHKNMLQTETYAKLSLLS
+ DAVRNNINIEVLDVSITPKYKMRLVLALCGLMGFIFSIATLLCKRALTEYRVEKKTVK
+ DSVGNIAQR"
+ misc_feature 697756..697944
+ /locus_tag="SARI_00677"
+ /note="G-rich domain on putative tyrosine kinase; Region:
+ GNVR; pfam13807"
+ /db_xref="CDD:222392"
+ gene complement(698058..699239)
+ /locus_tag="SARI_00678"
+ CDS complement(698058..699239)
+ /locus_tag="SARI_00678"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="protein motif:HMMTigr:IPR004750"
+ /inference="similar to AA sequence:INSD:AAO68349.1"
+ /note="'COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569743.1"
+ /db_xref="GI:161502631"
+ /db_xref="InterPro:IPR004750"
+ /db_xref="InterPro:IPR011701"
+ /translation="MHNSPAAAAPKSFDLTSTAFLIVAFLTGIAGALQTPTLSIFLTD
+ EVHARPGMVGFFFTGSAVIGIIVSQFLAGRSDKKGDRKKLIVFCCVLGMLACVLFAWN
+ RNYFILLFIGVFLSSFGSTANPQMFALAREHADRTGREAVMFSSILRAQVSLAWVIGP
+ PLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKDAPLATDVLEAPRRNRRDT
+ LLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFA
+ KRLGKRLLMRIAVVAGLCFYAGMLLAHAPATLLGLQLLNAIYIGILGGIGMLYFQDLM
+ PGQAGSATTLYTNTIRVGWIIAGSLAGIAAEIWNYHAVFWFALVMIVATMFCLARIKD
+ V"
+ misc_feature complement(698061..699239)
+ /locus_tag="SARI_00678"
+ /note="sugar efflux transporter B; Provisional; Region:
+ PRK15011"
+ /db_xref="CDD:184973"
+ misc_feature complement(698067..699185)
+ /locus_tag="SARI_00678"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature complement(order(698181..698183,698190..698195,
+ 698202..698207,698214..698219,698247..698249,
+ 698256..698261,698271..698273,698280..698285,
+ 698292..698294,698433..698435,698445..698447,
+ 698454..698456,698466..698468,698478..698480,
+ 698520..698522,698529..698534,698541..698546,
+ 698553..698555,698772..698774,698790..698795,
+ 698802..698804,698811..698813,698847..698849,
+ 698856..698861,698868..698873,698880..698885,
+ 699021..699026,699030..699035,699045..699047,
+ 699054..699059,699069..699071,699123..699128,
+ 699132..699140,699147..699149))
+ /locus_tag="SARI_00678"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene 699607..700737
+ /locus_tag="SARI_00679"
+ CDS 699607..700737
+ /locus_tag="SARI_00679"
+ /inference="protein motif:BlastProDom:IPR000032"
+ /inference="protein motif:BlastProDom:IPR002178"
+ /inference="protein motif:Gene3D:IPR000032"
+ /inference="protein motif:Gene3D:IPR002178"
+ /inference="protein motif:HMMPfam:IPR000032"
+ /inference="protein motif:HMMPfam:IPR002178"
+ /inference="protein motif:HMMTigr:IPR005698"
+ /inference="protein motif:ScanRegExp:IPR001020"
+ /inference="protein motif:ScanRegExp:IPR002114"
+ /inference="protein motif:ScanRegExp:IPR002178"
+ /inference="protein motif:superfamily:IPR000032"
+ /inference="similar to AA sequence:INSD:AAX66128.1"
+ /note="'phosphoenolpyruvate (PEP)-dependent, sugar
+ transporting phosphotransferase system; catalyzes the
+ phosphorylation of incoming sugar substrates concomitant
+ with their translocation across the cell membrane; IIA is
+ phosphorylated by phospho-HP which then transfers the
+ phosphoryl group to the IIB componentr'"
+ /codon_start=1
+ /transl_table=11
+ /product="bifunctional PTS system fructose-specific
+ transporter subunit IIA/HPr protein"
+ /protein_id="YP_001569744.1"
+ /db_xref="GI:161502632"
+ /db_xref="InterPro:IPR000032"
+ /db_xref="InterPro:IPR001020"
+ /db_xref="InterPro:IPR002114"
+ /db_xref="InterPro:IPR002178"
+ /db_xref="InterPro:IPR005698"
+ /translation="MFQLSVQDIHPGEQAGNKEEAIRQIAAALAQAGNVADGYVNGML
+ AREQQTSTFLGNGIAIPHGTTDTRDQVLKTGVQVFQFPQGVTWGEGQVAYVAIGIAAS
+ SDEHLGLLRQLTHVLSDDSVAEQLKSATTAEELRALLMGEKQSEQLKLDNETMTLDVI
+ ASSLVTLQALNAARLKEAGAVDAAFVAKTINDSPMNLGQGIWLNDSAEGNLRSAVAVS
+ RATQAFDVEGEKAALLVTVAMNDEQPIAVLKRLGDLLLNNKADRLLSADAATLLALLT
+ SDDALTDDVLSAEFVVRNEHGLHARPGTMLVNTIKQFNSEITVTNLDGTGKPANGRSL
+ MKVVALGVKKGHRLRFTAQGEDAEQALKAIGDAIAAGLGEGA"
+ misc_feature 699607..700731
+ /locus_tag="SARI_00679"
+ /note="bifunctional PTS system fructose-specific
+ transporter subunit IIA/HPr protein; Provisional; Region:
+ PRK11109"
+ /db_xref="CDD:236849"
+ misc_feature 699616..700023
+ /locus_tag="SARI_00679"
+ /note="PTS_IIA, PTS system, fructose/mannitol specific IIA
+ subunit. The bacterial phosphoenolpyruvate: sugar
+ phosphotransferase system (PTS) is a multi-protein system
+ involved in the regulation of a variety of metabolic and
+ transcriptional processes. This...; Region: PTS_IIA_fru;
+ cd00211"
+ /db_xref="CDD:238129"
+ misc_feature order(699742..699744,699790..699792)
+ /locus_tag="SARI_00679"
+ /note="active site"
+ /db_xref="CDD:238129"
+ misc_feature 699790..699792
+ /locus_tag="SARI_00679"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238129"
+ misc_feature 700471..700710
+ /locus_tag="SARI_00679"
+ /note="Histidine-containing phosphocarrier protein
+ (HPr)-like proteins. HPr is a central component of the
+ bacterial phosphoenolpyruvate sugar phosphotransferase
+ system (PTS). The PTS catalyses the phosphorylation of
+ sugar substrates during their translocation...; Region:
+ PTS-HPr_like; cd00367"
+ /db_xref="CDD:238217"
+ misc_feature 700471..700482
+ /locus_tag="SARI_00679"
+ /note="dimerization domain swap beta strand [polypeptide
+ binding]; other site"
+ /db_xref="CDD:238217"
+ misc_feature order(700498..700500,700504..700509,700513..700518,
+ 700528..700530,700537..700539,700600..700611,
+ 700618..700623)
+ /locus_tag="SARI_00679"
+ /note="regulatory protein interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:238217"
+ misc_feature 700501..700503
+ /locus_tag="SARI_00679"
+ /note="active site"
+ /db_xref="CDD:238217"
+ misc_feature 700603..700605
+ /locus_tag="SARI_00679"
+ /note="regulatory phosphorylation site [posttranslational
+ modification]; other site"
+ /db_xref="CDD:238217"
+ gene 700737..701675
+ /gene="fruK"
+ /locus_tag="SARI_00680"
+ CDS 700737..701675
+ /gene="fruK"
+ /locus_tag="SARI_00680"
+ /inference="protein motif:HMMPfam:IPR011611"
+ /inference="protein motif:ScanRegExp:IPR002173"
+ /inference="similar to AA sequence:INSD:AAV76646.1"
+ /note="'converts fructose-1-phosphate and ATP to
+ fructose-1,6-bisphosphate and ADP; highly specific for
+ fructose-1-phopshate; similar to PfkB; forms homodimers'"
+ /codon_start=1
+ /transl_table=11
+ /product="1-phosphofructokinase"
+ /protein_id="YP_001569745.1"
+ /db_xref="GI:161502633"
+ /db_xref="InterPro:IPR002173"
+ /db_xref="InterPro:IPR011611"
+ /translation="MSRRVATITLNPAYDLVGFCPEIERGEVNLVKTTGLHAAGKGIN
+ VAKVLKDLGIDVTVGGFLGKDNQDGFQQLFSELGIANRFQVVQGRTRINVKLTEKDGE
+ VTDFNFSGFDVTPADWERFVNDSLSWLGQFDMVCVSGSLPAGVSPEAFTDWMTRLRSQ
+ CPCIIFDSSREALVAGLKAAPWLVKPNRRELEIWAGRKLPEMKDVIDAAHALREQGIA
+ HVVISLGAEGALWVNASGEWIAKPPAVDVVSTVGAGDSMVGGLIYGLLMRESSEHTLR
+ LATAVAALAVSQSNVGITDRPQLAAMMARVDLQPFN"
+ misc_feature 700746..701672
+ /gene="fruK"
+ /locus_tag="SARI_00680"
+ /note="Fructose-1-phosphate kinase and related
+ fructose-6-phosphate kinase (PfkB) [Carbohydrate transport
+ and metabolism]; Region: FruK; COG1105"
+ /db_xref="CDD:224030"
+ misc_feature 700746..701552
+ /gene="fruK"
+ /locus_tag="SARI_00680"
+ /note="1-phosphofructokinase (FruK), minor
+ 6-phosphofructokinase (pfkB) and related sugar kinases.
+ FruK plays an important role in the predominant pathway
+ for fructose utilisation.This group also contains
+ tagatose-6-phophate kinase, an enzyme of the tagatose...;
+ Region: FruK_PfkB_like; cd01164"
+ /db_xref="CDD:238570"
+ misc_feature order(700872..700874,700884..700886,700902..700904,
+ 700908..700910,701148..701150)
+ /gene="fruK"
+ /locus_tag="SARI_00680"
+ /note="putative substrate binding site [chemical binding];
+ other site"
+ /db_xref="CDD:238570"
+ misc_feature order(701235..701237,701289..701291,701295..701297,
+ 701403..701405,701421..701423,701493..701495,
+ 701499..701501)
+ /gene="fruK"
+ /locus_tag="SARI_00680"
+ /note="putative ATP binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:238570"
+ gene 701692..703380
+ /locus_tag="SARI_00681"
+ CDS 701692..703380
+ /locus_tag="SARI_00681"
+ /inference="protein motif:HMMPfam:IPR003352"
+ /inference="protein motif:HMMPfam:IPR003353"
+ /inference="protein motif:HMMTigr:IPR003353"
+ /inference="protein motif:HMMTigr:IPR006327"
+ /inference="similar to AA sequence:INSD:CAD02586.1"
+ /note="phosphoenolpyruvate-dependent sugar
+ phosphotransferase system; catalyzes the phosphorylation
+ of incoming sugar substrates concomitant with their
+ translocation across the cell membrane; IIB is
+ phosphorylated by IIA and then transfers the phosphoryl
+ group to the sugar; IIC forms the translocation channel"
+ /codon_start=1
+ /transl_table=11
+ /product="PTS system fructose-specific transporter
+ subunits IIBC"
+ /protein_id="YP_001569746.1"
+ /db_xref="GI:161502634"
+ /db_xref="InterPro:IPR003352"
+ /db_xref="InterPro:IPR003353"
+ /db_xref="InterPro:IPR006327"
+ /translation="MKTLLIIDANLGQARAYMAKTLLGAAAHKANLEIIDNPNDAELA
+ IVLGESLPNDNALNGKKVWLGDIGRAVAHPELFLSEAKSHATPYSAPAAVAPAASGGP
+ KRVVAVTACPTGVAHTFMAAEAIETEAKKRGWWVKVETRGSVGAGNAITPEEVAEADL
+ VIVAADIEVDLAKFAGLPMYRTSTGLALKKTAQELDKAVAEATPYQPAGKASQAAAEG
+ KKESAGAYRHLLTGVSYMLPMVVAGGLCIALSFAFGIEAFKEPGTLAAALMQIGGGSA
+ FALMVPVLAGYIAFSIADRPGLTPGLIGGMLAVSTGSGFIGGIIAGFLAGYMAKLIST
+ KLKLPQSMEALKPILIIPLISSLVVGLAMIYLIGKPVAGILEGLTHWLQTMGTANAVL
+ LGAILGGMMCTDMGGPVNKAAYAFGVGLLSTQTYAPMAAIMAAGMVPPLALGLATMVA
+ RRKFDKAQQEGGKAALVLGLCFITEGAIPFAARDPMRVLPCCIVGGALTGAISMAVGA
+ KLMAPHGGLFVLLIPGAITPVLGYLLAIVAGTLVAGLAYAFVKRPETEVAAKAA"
+ misc_feature 701692..703377
+ /locus_tag="SARI_00681"
+ /note="PTS system fructose-specific transporter subunits
+ IIBC; Provisional; Region: PRK10712"
+ /db_xref="CDD:236740"
+ misc_feature 701692..701943
+ /locus_tag="SARI_00681"
+ /note="N-terminal domain of the phosphotransferase system
+ fructose-specific component IIB [Carbohydrate transport
+ and metabolism]; Region: COG3925"
+ /db_xref="CDD:226438"
+ misc_feature 702004..702291
+ /locus_tag="SARI_00681"
+ /note="PTS_IIB_fructose: subunit IIB of enzyme II (EII) of
+ the fructose-specific phosphoenolpyruvate:carbohydrate
+ phosphotransferase system (PTS). In this system, EII (also
+ referred to as FruAB) is a fructose-specific permease made
+ up of two proteins (FruA and...; Region: PTS_IIB_fructose;
+ cd05569"
+ /db_xref="CDD:99911"
+ misc_feature order(702022..702024,702028..702033,702040..702045)
+ /locus_tag="SARI_00681"
+ /note="active site"
+ /db_xref="CDD:99911"
+ misc_feature order(702022..702033,702037..702045)
+ /locus_tag="SARI_00681"
+ /note="P-loop; other site"
+ /db_xref="CDD:99911"
+ misc_feature 702022..702024
+ /locus_tag="SARI_00681"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:99911"
+ misc_feature 702367..703344
+ /locus_tag="SARI_00681"
+ /note="PTS system, fructose subfamily, IIC component;
+ Region: PTS_IIC_fructo; TIGR01427"
+ /db_xref="CDD:233408"
+ gene complement(703571..704269)
+ /locus_tag="SARI_00682"
+ CDS complement(703571..704269)
+ /locus_tag="SARI_00682"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000595"
+ /inference="protein motif:HMMSmart:IPR000595"
+ /inference="protein motif:superfamily:IPR000595"
+ /inference="similar to AA sequence:INSD:AAN81153.1"
+ /note="activator of nucleoside metabolism"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional activator YeiL"
+ /protein_id="YP_001569747.1"
+ /db_xref="GI:161502635"
+ /db_xref="InterPro:IPR000595"
+ /db_xref="InterPro:IPR011991"
+ /translation="MKEIQNDVLRQQLIGCSGYTECFSDDVVQDTRLFHIEAGDYIVR
+ EGSQPAYLFYLVRGRARLYATLPNGRVSLIDFFGAPCFIGEIELIDVDHGPRAVQAIE
+ ACWCLALPMKQYRSRLLNDAIFLRQLCLALSRKNYRNIVSLTQNISFPLTNRLAAFIL
+ LMQHGDLYHEKNTQTAEYMGVTYRHLLYVLAQFTREGLLLKQKNGYIIKDKQRLTALA
+ LEMTPENNVIDLFH"
+ misc_feature complement(703592..704269)
+ /locus_tag="SARI_00682"
+ /note="DNA-binding transcriptional activator YeiL;
+ Provisional; Region: PRK10402"
+ /db_xref="CDD:236682"
+ misc_feature complement(703886..704197)
+ /locus_tag="SARI_00682"
+ /note="effector domain of the CAP family of transcription
+ factors; members include CAP (or cAMP receptor protein
+ (CRP)), which binds cAMP, FNR (fumarate and nitrate
+ reduction), which uses an iron-sulfur cluster to sense
+ oxygen) and CooA, a heme containing CO...; Region: CAP_ED;
+ cd00038"
+ /db_xref="CDD:237999"
+ misc_feature complement(order(703982..703990,704015..704020))
+ /locus_tag="SARI_00682"
+ /note="ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:237999"
+ misc_feature complement(order(703898..703906,703916..703924))
+ /locus_tag="SARI_00682"
+ /note="flexible hinge region; other site"
+ /db_xref="CDD:237999"
+ misc_feature complement(703619..703813)
+ /locus_tag="SARI_00682"
+ /note="helix_turn_helix, cAMP Regulatory protein
+ C-terminus; DNA binding domain of prokaryotic regulatory
+ proteins belonging to the catabolite activator protein
+ family; Region: HTH_CRP; cl17320"
+ /db_xref="CDD:247874"
+ gene 704521..705453
+ /gene="rihB"
+ /locus_tag="SARI_00683"
+ CDS 704521..705453
+ /gene="rihB"
+ /locus_tag="SARI_00683"
+ /inference="protein motif:BlastProDom:IPR001910"
+ /inference="protein motif:Gene3D:IPR001910"
+ /inference="protein motif:HMMPfam:IPR001910"
+ /inference="protein motif:ScanRegExp:IPR001910"
+ /inference="protein motif:superfamily:IPR001910"
+ /inference="similar to AA sequence:REFSEQ:ZP_00926768.1"
+ /note="'Hydrolyzes cytidine or uridine to ribose and
+ cytosine or uracil, respectively'"
+ /codon_start=1
+ /transl_table=11
+ /product="ribonucleoside hydrolase 2"
+ /protein_id="YP_001569748.1"
+ /db_xref="GI:161502636"
+ /db_xref="InterPro:IPR001910"
+ /translation="MERRKIILDCDPGHDDAIAMMMAARHPAINLLGITIVAGNQTLD
+ KTLVNGLNVCQKLNIDVPVYAGMPQPIMRKQIVADNIHGESGLDGPVFEPLNREAEST
+ HAVKYIIDTLMASSGDITLVPVGPLSNIAVAMRMQPAIVPKIREIVLMGGAYGTGNFT
+ PSAEFNIFADPEAARVVFTSGAPLVMMGLDLTNQTICTADVIARMENVGGPAGQLFSD
+ IMNFTLKTQFENYGLAGGPVHDATCIGYLINPQGIKTQDMYVEVDVNSGPCYGRTVCD
+ ELGVLGKPANAKVGISIDTAWFWDLVEECVRKYL"
+ misc_feature 704533..705438
+ /gene="rihB"
+ /locus_tag="SARI_00683"
+ /note="nuc_hydro_IU_UC_XIUA: inosine-uridine preferring,
+ xanthosine-inosine-uridine-adenosine-preferring and,
+ uridine-cytidine preferring nucleoside hydrolases.
+ Nucleoside hydrolases cleave the N-glycosidic bond in
+ nucleosides generating ribose and the...; Region:
+ nuc_hydro_IU_UC_XIUA; cd02651"
+ /db_xref="CDD:239117"
+ misc_feature order(704551..704553,704563..704568,704638..704640,
+ 704761..704763,704890..704892,704992..704994,
+ 705010..705012,705016..705018,705238..705240)
+ /gene="rihB"
+ /locus_tag="SARI_00683"
+ /note="active site"
+ /db_xref="CDD:239117"
+ misc_feature order(704731..704733,704923..704925,705046..705048,
+ 705307..705309,705313..705318,705325..705327)
+ /gene="rihB"
+ /locus_tag="SARI_00683"
+ /note="tetramer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:239117"
+ gene 705559..706809
+ /locus_tag="SARI_00684"
+ CDS 705559..706809
+ /locus_tag="SARI_00684"
+ /inference="protein motif:BlastProDom:IPR008276"
+ /inference="protein motif:HMMPanther:IPR008276"
+ /inference="protein motif:HMMPfam:IPR002668"
+ /inference="protein motif:HMMPfam:IPR011642"
+ /inference="protein motif:HMMPfam:IPR011657"
+ /inference="protein motif:HMMTigr:IPR008276"
+ /inference="similar to AA sequence:REFSEQ:ZP_00736778.1"
+ /note="'COG: COG1972 Nucleoside permease;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569749.1"
+ /db_xref="GI:161502637"
+ /db_xref="InterPro:IPR002668"
+ /db_xref="InterPro:IPR008276"
+ /db_xref="InterPro:IPR011642"
+ /db_xref="InterPro:IPR011657"
+ /translation="MDVMRSVLGMAVLLTIAFLLSVNKKRISLRTVGAALLLQFTIGG
+ VMLYFPPGKWLAEQAALGVHKVMTYSDAGSTFIFGALAGPKMDQVFDGAGFVFAFRVL
+ PAIIFITALVSLLYYVGVMGGLIRILGGIFQKALTISKIESFVAVTTIFLGQNEIPAI
+ VKPFMDRLNRNELFTAICSGMASVAGSTMIGYASLGVPIDYLLAASLMAIPGGILFAR
+ MLSPATEETQVTFDNLSFTETPPKSIIEAAASGAMTGLKIAAGVATVVMAFVAIIALI
+ NGIIGGIGGWFGSAHASLEGIFGWLLAPLAWLMGVDWSEATLAGSLIGQKLAINEFVA
+ YLNFSPYLQTGGTLDVKTIAIISFALCGFANFGSIGVVVGAFSAVAPHRAPEIAQLGM
+ RALAAATLSNLMSATIAGFFIGLA"
+ misc_feature 705559..706800
+ /locus_tag="SARI_00684"
+ /note="Nucleoside permease [Nucleotide transport and
+ metabolism]; Region: NupC; COG1972"
+ /db_xref="CDD:224883"
+ misc_feature 705580..705804
+ /locus_tag="SARI_00684"
+ /note="Na+ dependent nucleoside transporter N-terminus;
+ Region: Nucleos_tra2_N; pfam01773"
+ /db_xref="CDD:201962"
+ misc_feature 705850..706146
+ /locus_tag="SARI_00684"
+ /note="Nucleoside recognition; Region: Gate; pfam07670"
+ /db_xref="CDD:219507"
+ misc_feature 706159..706797
+ /locus_tag="SARI_00684"
+ /note="Na+ dependent nucleoside transporter C-terminus;
+ Region: Nucleos_tra2_C; pfam07662"
+ /db_xref="CDD:219502"
+ gene complement(706936..707793)
+ /locus_tag="SARI_00686"
+ CDS complement(706936..707793)
+ /locus_tag="SARI_00686"
+ /inference="protein motif:HMMPanther:IPR001719"
+ /inference="protein motif:HMMPfam:IPR012307"
+ /inference="protein motif:HMMSmart:IPR001719"
+ /inference="protein motif:HMMTigr:IPR001719"
+ /inference="protein motif:ScanRegExp:IPR001719"
+ /inference="similar to AA sequence:INSD:AAO68353.1"
+ /note="Assists in DNA repair by cleaving phosphodiester
+ bonds at apurinic or apyrimidinic sties to produce new 5'
+ ends that are base-free deoxyribose 5-phosphate residues"
+ /codon_start=1
+ /transl_table=11
+ /product="endonuclease IV"
+ /protein_id="YP_001569750.1"
+ /db_xref="GI:161502639"
+ /db_xref="InterPro:IPR001719"
+ /db_xref="InterPro:IPR012307"
+ /translation="MKYIGAHVSAAGGLANAPARAAEIGATAFALFTKNQRQWRAAPL
+ IPQVIDDFKIACEKYHFSAAQILPHDSYLINLGHPVSEALEKSRDAFLDEMQRCEQLG
+ LTLLNFHPGSHLMQIAQEDCLARIAESINIALAQTEGVTAVIENTAGQGSNLGFEFEQ
+ LAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPEACEKTFAEFGQIVGFQYLRGMHLN
+ DAKSAFGSRVDRHHSLGEGNIGHDAFRWIMQDARFDGIPLVLETINPDIWAEEIAWLK
+ AQQSEKAVA"
+ misc_feature complement(706957..707793)
+ /locus_tag="SARI_00686"
+ /note="endonuclease IV; Provisional; Region: PRK01060"
+ /db_xref="CDD:179214"
+ misc_feature complement(706966..707784)
+ /locus_tag="SARI_00686"
+ /note="AP endonuclease family 2; These endonucleases play
+ a role in DNA repair. Cleave phosphodiester bonds at
+ apurinic or apyrimidinic sites; the alignment also
+ contains hexulose-6-phosphate isomerases, enzymes that
+ catalyze the epimerization of...; Region: AP2Ec; cd00019"
+ /db_xref="CDD:237986"
+ misc_feature complement(order(706990..706992,707011..707013,
+ 707578..707580,707698..707700,707773..707775))
+ /locus_tag="SARI_00686"
+ /note="AP (apurinic/apyrimidinic) site pocket; other site"
+ /db_xref="CDD:237986"
+ misc_feature complement(order(707560..707562,707569..707571,
+ 707575..707580,707677..707691))
+ /locus_tag="SARI_00686"
+ /note="DNA interaction; other site"
+ /db_xref="CDD:237986"
+ misc_feature complement(order(707011..707013,707101..707103,
+ 707107..707109,707146..707148,707248..707250,
+ 707257..707259,707359..707361,707467..707469,
+ 707587..707589))
+ /locus_tag="SARI_00686"
+ /note="Metal-binding active site; metal-binding site"
+ /db_xref="CDD:237986"
+ gene 707773..707937
+ /locus_tag="SARI_00685"
+ CDS 707773..707937
+ /locus_tag="SARI_00685"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569751.1"
+ /db_xref="GI:161502638"
+ /translation="MRSDVFHKRLLLNPLYGSLRTYNNGLTGVKRNGLCDKAMDQDVN
+ GSAANNQPSE"
+ gene complement(707872..708921)
+ /locus_tag="SARI_00688"
+ CDS complement(707872..708921)
+ /locus_tag="SARI_00688"
+ /inference="protein motif:HMMPfam:IPR004630"
+ /inference="protein motif:HMMTigr:IPR004630"
+ /inference="similar to AA sequence:INSD:AAV76649.1"
+ /note="'COG: COG2855 Predicted membrane protein;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569752.2"
+ /db_xref="GI:448236201"
+ /db_xref="InterPro:IPR004630"
+ /translation="MTEITLQKHRRTVWHFIPGLALSAVITGAALWGGAIPAVAGAGF
+ SALTLAILLGMVIGNTVYPQIWKQCDGGVLFAKQHLLRLGIILYGFRLTFSQIADVGI
+ SGIVIDVLTLSSTFMLACFLGQKVFGLDRHTSWLIGAGSSICGAAAVLATEPVVKAEA
+ SKVTVAVATVVIFGTIAIFLYPAMYPLLAHWFSPETYGIYIGSTMHEVAQVVAAGHAV
+ SPDAENAAVIAKMLRVMMLAPFLIILAARVKQLSPATGAEKSKITIPWFAIFFILVAI
+ FNSFHLLPKAIVDMLVTLDTILLAMAMAALGLTTHVSALKKAGAKPLLMALALFAWLI
+ IGGGAINVLIHSLIA"
+ misc_feature complement(707878..708882)
+ /locus_tag="SARI_00688"
+ /note="Conserved hypothetical protein 698; Region:
+ Cons_hypoth698; cl01075"
+ /db_xref="CDD:242287"
+ STS 707983..708298
+ /standard_name="D1S3689"
+ /db_xref="UniSTS:474267"
+ gene 709042..709905
+ /locus_tag="SARI_00687"
+ CDS 709042..709905
+ /locus_tag="SARI_00687"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="protein motif:HMMPfam:IPR005119"
+ /inference="similar to AA sequence:INSD:AAO68355.1"
+ /note="'KEGG: shn:Shewana3_3435 1.7e-07 transcriptional
+ regulator, LysR family K06022;
+ COG: COG0583 Transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative DNA-binding transcriptional regulator"
+ /protein_id="YP_001569753.1"
+ /db_xref="GI:161502640"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR005119"
+ /translation="MHITLRQLEVFAEVLKSGSTTQASVMLSLSQSAVSAALTDLEGQ
+ LGVQLFDRVGKRLVVNEHGRLLYPRALALLEQAVEIEQLFREDNGAIRVYASSTIGNY
+ ILPAMIARYRQHYPALPLELSVGNSQDVINAVLDFRVDIGLIEGPCHSTEIISEPWLE
+ DELVVFAAPSSTLTQGPVTLEQLAASPWILRERGSGTREIVDYLLLSHLPRFHMAMEL
+ GNSEAIKHAVRHGLGISCLSRRVIAEQLQARTLSEVAVPLPRLVRTLWRVHHRQKHLS
+ NALQRFLSYCE"
+ misc_feature 709042..709902
+ /locus_tag="SARI_00687"
+ /note="putative DNA-binding transcriptional regulator;
+ Provisional; Region: PRK10837"
+ /db_xref="CDD:182768"
+ misc_feature 709054..709233
+ /locus_tag="SARI_00687"
+ /note="Bacterial regulatory helix-turn-helix protein, lysR
+ family; Region: HTH_1; pfam00126"
+ /db_xref="CDD:215735"
+ misc_feature 709312..709899
+ /locus_tag="SARI_00687"
+ /note="C-terminal substrate binding domain of LysR-type
+ transcriptional regulator CysL, which activates the
+ transcription of the cysJI operon encoding sulfite
+ reductase, contains the type 2 periplasmic binding fold;
+ Region: PBP2_CysL_like; cd08420"
+ /db_xref="CDD:176112"
+ misc_feature order(709354..709359,709363..709368,709375..709377,
+ 709387..709389,709393..709413,709684..709701,
+ 709717..709722,709726..709731)
+ /locus_tag="SARI_00687"
+ /note="putative dimerization interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:176112"
+ gene 710095..711564
+ /locus_tag="SARI_00689"
+ CDS 710095..711564
+ /locus_tag="SARI_00689"
+ /inference="protein motif:HMMPanther:IPR002293"
+ /inference="protein motif:HMMPfam:IPR004841"
+ /inference="protein motif:ScanRegExp:IPR004840"
+ /inference="similar to AA sequence:INSD:AAL21104.1"
+ /note="'KEGG: eci:UTI89_C0120 9.8e-70 aroP; aromatic amino
+ acid transport protein AroP K03293;
+ COG: COG0833 Amino acid transporters;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="lysine transporter"
+ /protein_id="YP_001569754.1"
+ /db_xref="GI:161502642"
+ /db_xref="InterPro:IPR002293"
+ /db_xref="InterPro:IPR004840"
+ /db_xref="InterPro:IPR004841"
+ /translation="MGSKTKTTEAPALRRELKARHLTMIAIGGSIGTGLFVASGATIS
+ QAGPGGALFSYILIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGFGFALGWNY
+ WYNWAVTIAVDLVAAQLVMGWWFPDTPGWIWSALFLCVIFLLNYISVRGFGEAEYWFS
+ LIKVATVIIFIIVGVAMIIGIFKGVEPVGWSNWTTGDAPFAGGFAAMIGVAMIVGFSF
+ QGTELIGIAAGESENPEKNIPRAVRQVFWRILLFYVFAILIISLIIPYTDPNLLRNDV
+ KDISVSPFTLVFQHAGLLSAAAIMNAVILTAVLSAGNSGMYASTRMLYTLACDGKAPR
+ IFAKLSRGGVPRNALYATTVIAGLCFLTSMFGNQTVYLWLLNTSGMTGFIAWLGIAIS
+ HYRFRRGYMLQGYDVNDLPYRSGFFPLGPIFAFILCLIITLGQNYEAFLKDTIDWGGV
+ AATYIGIPLFLIIWFGYKLIKGTHFVRYSEMHFPERVKK"
+ misc_feature 710095..711561
+ /locus_tag="SARI_00689"
+ /note="lysine transporter; Provisional; Region: PRK10836"
+ /db_xref="CDD:182767"
+ gene 711950..713902
+ /locus_tag="SARI_00690"
+ CDS 711950..713902
+ /locus_tag="SARI_00690"
+ /inference="protein motif:HMMPfam:IPR000531"
+ /inference="protein motif:HMMPfam:IPR012910"
+ /inference="protein motif:ScanRegExp:IPR010916"
+ /note="'Cir; FeuA; CirA; receptor protein for siderophores
+ (colicin IA, IB and V) and microcins (E492, H47, and M);
+ TonB-dependent; able to transport monomers, dimer, and
+ linear trimers of 2,3-dihydorxybenzoylserine; outer
+ membrane protein'"
+ /codon_start=1
+ /transl_table=11
+ /product="colicin I receptor"
+ /protein_id="YP_001569755.1"
+ /db_xref="GI:161502643"
+ /db_xref="InterPro:IPR000531"
+ /db_xref="InterPro:IPR010916"
+ /db_xref="InterPro:IPR012910"
+ /translation="MSAVTLAWPVAAATDDGETMVVTASAIEQNLKDAPASISVITQQ
+ DLQRRPVQNLKDVLKEVPGVQLTNEGDNRKGVSIRGLDSSYTLILIDGKRVNSRNAVF
+ RHNDFDLNWIPVDAIERIEVVRGPMSSLYGSDALGGVVNIITKKIGQKWHGSVTVDST
+ IQEHRDRGDTYNGQFFTSGPLINGVLGMKAYGSLAKRGKDEQQRSATTATGETPRIEG
+ FTSRDGNVEFAWTPNENHDVTAGYGFDRQDRDSDSLDKNRLERQNYALSHNGRWDLGN
+ SELKFYGEKVENKNPGNSSPITSESNSIDGKYVLPLAPVNQFLTFGGEWRHDKLSDAV
+ NLTGGSSTKTSASQYALFLEDEWRIFEPLALTTGIRMDDHETYGDHWSPRAYLVYNAT
+ NTLTVKGGWATAFKAPSLLQLSPDWATNSCRGGCRIVGSPDLKPETSESWELGLYYRG
+ EEGILEGVEASVTTFRNDVDNRISISRTADVNAAPGYSNFVGFETNSRGQRVPVFRYY
+ NVNKARIQGVETELKVPFNEAWKLSLNYTYNDGRDVSNGGNKPLSDLPFHTANGTLDW
+ KPAQLEDWSFYVSGNYTGRKRADSATAKTPGGYVVWDTGAAWQATKNVKLRAGVLNVG
+ DKDLKRDDYGYTEDGRRYFMAVDYRF"
+ misc_feature 711950..713899
+ /locus_tag="SARI_00690"
+ /note="catecholate siderophore receptor CirA; Provisional;
+ Region: PRK10064"
+ /db_xref="CDD:236646"
+ misc_feature 712058..713899
+ /locus_tag="SARI_00690"
+ /note="TonB dependent/Ligand-Gated channels are created by
+ a monomeric 22 strand (22,24) anti-parallel beta-barrel.
+ Ligands apparently bind to the large extracellular loops.
+ The N-terminal 150-200 residues form a plug from the
+ periplasmic end of barrel; Region: ligand_gated_channel;
+ cd01347"
+ /db_xref="CDD:238657"
+ misc_feature order(712058..712087,712115..712144,712175..712192,
+ 712211..712234,712289..712321,712355..712381)
+ /locus_tag="SARI_00690"
+ /note="N-terminal plug; other site"
+ /db_xref="CDD:238657"
+ misc_feature order(712811..712813,712838..712840)
+ /locus_tag="SARI_00690"
+ /note="ligand-binding site [chemical binding]; other site"
+ /db_xref="CDD:238657"
+ gene complement(713946..715268)
+ /locus_tag="SARI_00691"
+ CDS complement(713946..715268)
+ /locus_tag="SARI_00691"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="similar to AA sequence:INSD:AAL21102.1"
+ /note="'COG: COG2271 Sugar phosphate permease;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569756.1"
+ /db_xref="GI:161502644"
+ /db_xref="InterPro:IPR011701"
+ /translation="MSIKTFIFSQPDKPIVKEKKEIDQTYKKFRFEIIASVFISYAVF
+ YLTRKNFSAAMPAMLTETSLTAEDFAIMSSIFYILYGAMKFVGGMLVDNINPKAMTGP
+ VLIGVGIVNILFGFSDSVAAFYVLYSLNAILQGTSFPPMAKIMASWFSKNERGRWWAI
+ VEAAHNIGGSLAPLLTSFAIAFSGSWKMGFYVPGAISLLMGIVALFTIKDRPGTLGLP
+ NVGQWRNDPTELAQVKASPVNLSFWQIFVKYILTNPLVWIIIIGDMSVYIARTILNDW
+ PQIYYSQVHGWSLIKANSIISWFEAGGLAGGLLAGYLSDFMFKSNRWMTGLIFALALC
+ ICIVLVPLVQDTSYTLTAILFTIMGFALYGPHMLFAVGCLDVTHKDAAGSITGFRGLF
+ SYVGAAMAGVPVIMVKNSWAWSGVYIYALIAILLTTLSLALLSRLHRL"
+ misc_feature complement(714012..715256)
+ /locus_tag="SARI_00691"
+ /note="Sugar phosphate permease [Carbohydrate transport
+ and metabolism]; Region: UhpC; COG2271"
+ /db_xref="CDD:225180"
+ misc_feature complement(714009..715169)
+ /locus_tag="SARI_00691"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature complement(order(714078..714080,714087..714092,
+ 714099..714104,714111..714116,714147..714149,
+ 714156..714161,714171..714173,714180..714185,
+ 714192..714194,714348..714350,714360..714362,
+ 714369..714371,714381..714383,714393..714395,
+ 714435..714437,714444..714449,714456..714461,
+ 714468..714470,714762..714764,714780..714785,
+ 714792..714797,714831..714833,714840..714845,
+ 714852..714857,714864..714869,715005..715010,
+ 715014..715019,715029..715031,715038..715043,
+ 715050..715052,715101..715106,715110..715118,
+ 715125..715127))
+ /locus_tag="SARI_00691"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene complement(715301..716188)
+ /locus_tag="SARI_00692"
+ CDS complement(715301..716188)
+ /locus_tag="SARI_00692"
+ /inference="protein motif:HMMPfam:IPR005834"
+ /inference="protein motif:HMMTigr:IPR004469"
+ /inference="protein motif:HMMTigr:IPR006383"
+ /inference="similar to AA sequence:INSD:AAX66119.1"
+ /note="'KEGG: aba:Acid345_2803 3.8e-45 phosphoserine
+ phosphatase SerB K01079;
+ COG: COG0560 Phosphoserine phosphatase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569757.1"
+ /db_xref="GI:161502645"
+ /db_xref="InterPro:IPR004469"
+ /db_xref="InterPro:IPR005834"
+ /db_xref="InterPro:IPR006383"
+ /translation="MSTIYFITTQDIDTFQKKLQETLFNAVTMPFPLLFDKRYAALIN
+ TAYLKLTLPAECFTPEFYRYLRELSLHWQFDFFIKPQPLPANGIIAFDMDSTFIAEEG
+ VDEIARALGMSTQIAAITQQAMEGKLDFNASFTRRIGMLKGTPKAVLNAVCDRMTLSP
+ GLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLP
+ IMNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAWKAKPVVREKIH
+ HQINYHGFELLLFLIEDEL"
+ misc_feature complement(715340..715945)
+ /locus_tag="SARI_00692"
+ /note="Phosphoserine phosphatase [Amino acid transport and
+ metabolism]; Region: SerB; COG0560"
+ /db_xref="CDD:223634"
+ misc_feature complement(<715643..715924)
+ /locus_tag="SARI_00692"
+ /note="haloacid dehalogenase-like hydrolase; Region: HAD;
+ cl17202"
+ /db_xref="CDD:247756"
+ misc_feature complement(715397..715732)
+ /locus_tag="SARI_00692"
+ /note="Haloacid dehalogenase-like hydrolases. The haloacid
+ dehalogenase-like (HAD) superfamily includes L-2-haloacid
+ dehalogenase, epoxide hydrolase, phosphoserine
+ phosphatase, phosphomannomutase, phosphoglycolate
+ phosphatase, P-type ATPase, and many others; Region:
+ HAD_like; cd01427"
+ /db_xref="CDD:119389"
+ misc_feature complement(715649..715651)
+ /locus_tag="SARI_00692"
+ /note="motif II; other site"
+ /db_xref="CDD:119389"
+ gene complement(716115..716321)
+ /locus_tag="SARI_00694"
+ CDS complement(716115..716321)
+ /locus_tag="SARI_00694"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569758.1"
+ /db_xref="GI:161502647"
+ /translation="MCLNFTWYQKQRFFSHFLAVISVIARDSTPQKSHYNTRKLRELS
+ YEHYLFYYHTGYRYVSEKITGNVI"
+ gene 716189..716281
+ /locus_tag="SARI_00693"
+ CDS 716189..716281
+ /locus_tag="SARI_00693"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569759.1"
+ /db_xref="GI:161502646"
+ /translation="MITPLIYGYYNDSFAAWNLALSQISQPENG"
+ gene 716471..717772
+ /locus_tag="SARI_00695"
+ CDS 716471..717772
+ /locus_tag="SARI_00695"
+ /inference="protein motif:HMMPfam:IPR005130"
+ /inference="protein motif:HMMPfam:IPR005131"
+ /inference="protein motif:HMMTigr:IPR004644"
+ /inference="similar to AA sequence:REFSEQ:YP_217199.1"
+ /note="'KEGG: sec:SC2212 1.3e-227 sdhL; putative D-serine
+ dehydratase K01752;
+ COG: COG1760 L-serine deaminase;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569760.1"
+ /db_xref="GI:161502648"
+ /db_xref="InterPro:IPR004644"
+ /db_xref="InterPro:IPR005130"
+ /db_xref="InterPro:IPR005131"
+ /translation="MRAACHFISLLREQETLPLIREIEIELYGALSLSRKCHNVDTAL
+ YLGLLGYQPENVDLRSHMAVIKRAENENKIELPLSDAGGITIKVKIIANHQAHPGHPY
+ AMTFRARDDYFTVYEETWFSTGAGQVRKHGEPLTPSLPLRTVSPFEFSHAAQLLALCR
+ RNGLSVAALMMKNELYRHSPQTLQNYLAQIWDVMQQAVYRGLHTEGVLPGPYQVPRRA
+ CALHKTLQTNRSASDFLTALNWVNAFAIAVGEENASGGQIVTAPTNGACGIIPAALCW
+ YDKFVTPLDAGALTRFFLTAAAIAILFKQNASILGSEVGCQGEIGVACSMAAAGLAEL
+ MGASVEQTLSAAEIAMEHHLGLTCDPLGGQVQIPCIERNAISAVKAINAATMAMSRVS
+ EPCISLDEIIAAMYETGKDMSAKYRETYHGSLGKIQPRKRG"
+ misc_feature 716471..717742
+ /locus_tag="SARI_00695"
+ /note="L-serine dehydratase, iron-sulfur-dependent, single
+ chain form; Region: sda_mono; TIGR00720"
+ /db_xref="CDD:188076"
+ misc_feature 716471..716869
+ /locus_tag="SARI_00695"
+ /note="Serine dehydratase beta chain; Region: SDH_beta;
+ pfam03315"
+ /db_xref="CDD:217489"
+ misc_feature 716948..717748
+ /locus_tag="SARI_00695"
+ /note="Serine dehydratase alpha chain; Region: SDH_alpha;
+ pfam03313"
+ /db_xref="CDD:217488"
+ gene 717858..718166
+ /locus_tag="SARI_00696"
+ CDS 717858..718166
+ /locus_tag="SARI_00696"
+ /inference="protein motif:HMMPfam:IPR001387"
+ /inference="protein motif:HMMSmart:IPR001387"
+ /inference="protein motif:superfamily:IPR010982"
+ /inference="similar to AA sequence:REFSEQ:NP_461140.1"
+ /note="'COG: COG1396 Predicted transcriptional regulators;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569761.2"
+ /db_xref="GI:448236202"
+ /db_xref="InterPro:IPR001387"
+ /db_xref="InterPro:IPR010982"
+ /translation="MTQQQLADRAHVGIATIKRIEKGGGLNLDTLISLLRALDKLHNL
+ DAVLFESELRNFHESYEGGEGSGRLQVRQQAADLNNKSSAPQSEEVNYSAALENSLCW
+ "
+ misc_feature <717858..717974
+ /locus_tag="SARI_00696"
+ /note="Helix-turn-helix XRE-family like proteins.
+ Prokaryotic DNA binding proteins belonging to the
+ xenobiotic response element family of transcriptional
+ regulators; Region: HTH_XRE; cd00093"
+ /db_xref="CDD:238045"
+ misc_feature order(717864..717869,717900..717902,717909..717911,
+ 717921..717926)
+ /locus_tag="SARI_00696"
+ /note="sequence-specific DNA binding site [nucleotide
+ binding]; other site"
+ /db_xref="CDD:238045"
+ misc_feature 717918..717920
+ /locus_tag="SARI_00696"
+ /note="salt bridge; other site"
+ /db_xref="CDD:238045"
+ gene complement(718155..719012)
+ /locus_tag="SARI_00697"
+ CDS complement(718155..719012)
+ /locus_tag="SARI_00697"
+ /inference="protein motif:HMMPfam:IPR000801"
+ /inference="similar to AA sequence:REFSEQ:YP_149968.1"
+ /note="'KEGG: spt:SPA0657 2.5e-158 yeiG; putative esterase
+ K03929;
+ COG: COG0627 Predicted esterase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569762.1"
+ /db_xref="GI:161502650"
+ /db_xref="InterPro:IPR000801"
+ /translation="MEMLEEHRCFGGWQQRWRHHAATLNCAMTFSIFLPPTQDNEPPP
+ VLYWLSGLTCNDENFTTKAGAQRIAAELGIVLVMPDTSPRGEQVADDSGYDLGHGAGF
+ YLNATQPPWASHYRMYDYLRDELPALIQTQFNVSDRCAISGHSMGGHGALIMALKNPG
+ KYTSVSAFAPIVNPSRVPWGIKALTAYLGEDESAWTEWDSCELMLASQPQNAIPVLID
+ QGDSDQFLADQLQPAVLAEAARQTAWPMTLRIQPGYDHSYYFIASFIEDHLRFHARYL
+ RDERETSPT"
+ misc_feature complement(718185..719009)
+ /locus_tag="SARI_00697"
+ /note="S-formylglutathione hydrolase; Region:
+ fghA_ester_D; TIGR02821"
+ /db_xref="CDD:131868"
+ misc_feature complement(718185..718991)
+ /locus_tag="SARI_00697"
+ /note="S-formylglutathione hydrolase; Region: PLN02442"
+ /db_xref="CDD:178061"
+ gene complement(718940..719173)
+ /locus_tag="SARI_00698"
+ CDS complement(718940..719173)
+ /locus_tag="SARI_00698"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569763.1"
+ /db_xref="GI:161502651"
+ /translation="MMAGQRAYLLTQRYLNDEACLCITEVKVTHNAVNNLYYEESAYL
+ IRFTIKGAPAWKCSKSTDVLAAGSSAGVIMPPR"
+ gene 719342..720010
+ /gene="folE"
+ /locus_tag="SARI_00699"
+ CDS 719342..720010
+ /gene="folE"
+ /locus_tag="SARI_00699"
+ /inference="protein motif:BlastProDom:IPR001474"
+ /inference="protein motif:HMMPfam:IPR001474"
+ /inference="protein motif:HMMTigr:IPR001474"
+ /inference="protein motif:ScanRegExp:IPR001474"
+ /inference="similar to AA sequence:REFSEQ:YP_149969.1"
+ /note="'involved in the first step of tetrahydrofolate
+ biosynthesis; catalyzes the formation of formate and
+ 2-amino-4-hydroxy-6-(erythro-1,2,
+ 3-trihydroxypropyl)dihydropteridine triphosphate from GTP
+ and water; forms a homopolymer'"
+ /codon_start=1
+ /transl_table=11
+ /product="GTP cyclohydrolase I"
+ /protein_id="YP_001569764.1"
+ /db_xref="GI:161502652"
+ /db_xref="InterPro:IPR001474"
+ /translation="MPSLSKEAALVHDALVARGLETPLRPPMDELDNETRKSLIAGHM
+ TEIMQLLNLDLSDDSLMETPHRIAKMYVDEIFAGLDYANFPKITLIENKMKVDEMVTV
+ RDITLTSTCEHHFVTIDGKATVAYIPKDSVIGLSKINRIVQFFAQRPQVQERLTQQIL
+ TALQTLLGTNNVAVSIDAVHYCVKARGIRDATSATTTTSLGGLFKSSQNTRQEFLRAV
+ RHHP"
+ misc_feature 719459..720001
+ /gene="folE"
+ /locus_tag="SARI_00699"
+ /note="Tunnelling fold (T-fold). The five known T-folds
+ are found in five different enzymes with different
+ functions: dihydroneopterin-triphosphate epimerase
+ (DHNTPE), dihydroneopterin aldolase (DHNA) , GTP
+ cyclohydrolase I (GTPCH-1), 6-pyrovoyl...; Region: TFold;
+ cl00263"
+ /db_xref="CDD:241736"
+ misc_feature 719477..720004
+ /gene="folE"
+ /locus_tag="SARI_00699"
+ /note="GTP cyclohydrolase I; Provisional; Region:
+ PLN03044"
+ /db_xref="CDD:215549"
+ misc_feature order(719693..719695,719699..719701,719867..719869,
+ 719936..719938)
+ /gene="folE"
+ /locus_tag="SARI_00699"
+ /note="active site"
+ /db_xref="CDD:238351"
+ gene 720007..721167
+ /locus_tag="SARI_00700"
+ CDS 720007..721167
+ /locus_tag="SARI_00700"
+ /inference="protein motif:HMMPfam:IPR007299"
+ /inference="protein motif:HMMPfam:IPR007349"
+ /inference="similar to AA sequence:REFSEQ:YP_217195.1"
+ /note="'COG: COG2311 Predicted membrane protein;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569765.1"
+ /db_xref="GI:161502653"
+ /db_xref="InterPro:IPR007299"
+ /db_xref="InterPro:IPR007349"
+ /translation="MIKAETMERNVTLDFVRGVAILGILLLNISAFGLPKAAYLNPAW
+ YGAIVPEDAWSWAILDIVAQAKFLTLFALLFGAGLQMLLPRGKQWIQSRLTLLVLLGF
+ IHALFFWDGDILLAYGLVGLICWRLVRDAPSVKSLFNTGVLLYLVGIGVLVLLGVVST
+ SETSRAWTPDASAILYEKYWKLNGGMEAISNRAEMLSNSLLALGAQYGWQLAGMMLLG
+ AALMRSGWLKGQYSLRHYRRTGFLLVALGLMINLPAVILQWRLDWAYRWCAFLLQAPR
+ ELSAPLQTLGYAALMFGFWPQLSQCRLTLAIACVGRMALTNYLLQTIICTTLFYQFGL
+ FMEFNRLELLFFVVPVWAINLLFSVIWLRFWRQGPVEWLWRQLTLRASGSSR"
+ misc_feature 720022..721164
+ /locus_tag="SARI_00700"
+ /note="Predicted membrane protein [Function unknown];
+ Region: COG2311"
+ /db_xref="CDD:225193"
+ misc_feature 720043..721161
+ /locus_tag="SARI_00700"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10835"
+ /db_xref="CDD:182766"
+ gene 721317..722339
+ /locus_tag="SARI_00701"
+ CDS 721317..722339
+ /locus_tag="SARI_00701"
+ /inference="protein motif:HMMPfam:IPR000843"
+ /inference="protein motif:HMMPfam:IPR001761"
+ /inference="protein motif:HMMSmart:IPR000843"
+ /inference="protein motif:ScanRegExp:IPR000843"
+ /inference="protein motif:ScanRegExp:IPR001254"
+ /inference="protein motif:superfamily:IPR010982"
+ /inference="similar to AA sequence:REFSEQ:NP_461136.1"
+ /note="negative regulator of the mglBAC operon for
+ galactose utilization"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional regulator GalS"
+ /protein_id="YP_001569766.1"
+ /db_xref="GI:161502654"
+ /db_xref="InterPro:IPR000843"
+ /db_xref="InterPro:IPR001254"
+ /db_xref="InterPro:IPR001761"
+ /db_xref="InterPro:IPR010982"
+ /translation="MITIRDVARQAGVSVATVSRVLNNSALVSPDTRDAVMQAVTLLG
+ YRPNANAQALATQVSDTIGVVVMDVSDAFFGALVKAVDLVAQQHQKYVLIGNSYHEAE
+ KERHAIEVLIRQRCNALIVHSKALTDRELSDFMDQIPGMVLINRIVPGYAHRCVCLDN
+ VSGARMATRMLLNNGHQRIGYLASSHRIEDDAMRREGWLTALQEQGVSAPESWVGTGT
+ PDMQGGESAMVELLGRNLQLTAVFAYNDNMAAGALTALKDNGIAIPLHLSIIGFDDIP
+ IARYTDPQLTTVRYPIASMAKIATELALQGAAGTLDITATHCFMPTLVRRHSVAWRQN
+ AVLITN"
+ misc_feature 721317..722336
+ /locus_tag="SARI_00701"
+ /note="DNA-binding transcriptional regulator GalS;
+ Provisional; Region: PRK10401"
+ /db_xref="CDD:236681"
+ misc_feature 721329..721484
+ /locus_tag="SARI_00701"
+ /note="Helix-turn-helix (HTH) DNA binding domain of the
+ LacI family of transcriptional regulators; Region:
+ HTH_LacI; cd01392"
+ /db_xref="CDD:143331"
+ misc_feature order(721329..721331,721353..721367,721371..721376,
+ 721383..721385,721398..721403,721410..721412,
+ 721449..721451,721458..721460,721467..721472,
+ 721476..721481)
+ /locus_tag="SARI_00701"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:143331"
+ misc_feature 721449..721478
+ /locus_tag="SARI_00701"
+ /note="domain linker motif; other site"
+ /db_xref="CDD:143331"
+ misc_feature 721497..722300
+ /locus_tag="SARI_00701"
+ /note="Ligand binding domain of DNA transcription
+ iso-repressor GalS, which is one of two regulatory
+ proteins involved in galactose transport and metabolism;
+ Region: PBP1_GalS_like; cd06270"
+ /db_xref="CDD:107265"
+ misc_feature order(721497..721499,721518..721520,721536..721538,
+ 721551..721553,721560..721562,721587..721598,
+ 721602..721604,721644..721646,721656..721658,
+ 721977..721982,722076..722078,722154..722159)
+ /locus_tag="SARI_00701"
+ /note="dimerization interface (closed form) [polypeptide
+ binding]; other site"
+ /db_xref="CDD:107265"
+ misc_feature order(721533..721535,721680..721682,721896..721898,
+ 721971..721973,722049..722051,722133..722135)
+ /locus_tag="SARI_00701"
+ /note="ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:107265"
+ gene 722631..723629
+ /locus_tag="SARI_00702"
+ CDS 722631..723629
+ /locus_tag="SARI_00702"
+ /inference="protein motif:HMMPfam:IPR001761"
+ /inference="similar to AA sequence:INSD:AAL21094.1"
+ /note="'KEGG: msm:MSMEG_3095 5.6e-13 D-ribose-binding
+ periplasmic protein;
+ COG: COG1879 ABC-type sugar transport system, periplasmic
+ component;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569767.1"
+ /db_xref="GI:161502655"
+ /db_xref="InterPro:IPR001761"
+ /translation="MNKKVLTLSAVMASLLFGAQAHAADTRIGVTIYKYDDNFMSVVR
+ KAIEKDGKSAPDVQLLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEK
+ ARGQNVPVVFFNKEPSRKALDSYDKAYYVGTDSKESGVIQGDLIAKHWQANQGWDLNK
+ DGKIQYVLLKGEPGHPDAEARTTYVVKELNAKGIQTEQLALDTAMWDTAQAKDKMDAW
+ LSGPNANKIEVVIANNDAMAMGAVEALKAHNKSSIPVFGVDALPEALALVKSGAMAGT
+ VLNDANNQAKATFDLAKNLAEGKGAADGTNWKIENKIVRVPYVGVDKDNLSEFTQK"
+ misc_feature 722634..723623
+ /locus_tag="SARI_00702"
+ /note="methyl-galactoside ABC transporter
+ galactose-binding periplasmic protein MglB; Provisional;
+ Region: PRK15395"
+ /db_xref="CDD:185293"
+ misc_feature 722709..723593
+ /locus_tag="SARI_00702"
+ /note="Periplasmic glucose/galactose-binding protein
+ (GGBP) involved in chemotaxis towards, and active
+ transport of, glucose and galactose in various bacterial
+ species; Region: PBP1_GGBP; cd01539"
+ /db_xref="CDD:107252"
+ misc_feature order(722745..722750,722895..722897,722970..722975,
+ 723159..723161,723171..723173,723246..723248,
+ 723330..723332,723405..723407,723465..723467)
+ /locus_tag="SARI_00702"
+ /note="ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:107252"
+ misc_feature order(723099..723101,723105..723107,723111..723113,
+ 723117..723119,723123..723125,723312..723314)
+ /locus_tag="SARI_00702"
+ /note="calcium binding site [ion binding]; other site"
+ /db_xref="CDD:107252"
+ gene 723763..725283
+ /locus_tag="SARI_00703"
+ CDS 723763..725283
+ /locus_tag="SARI_00703"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:REFSEQ:NP_461134.1"
+ /note="with MglBC transports galactose or methyl
+ galactoside into the cell; contains 2 ATP binding domains"
+ /codon_start=1
+ /transl_table=11
+ /product="galactose/methyl galaxtoside transporter
+ ATP-binding protein"
+ /protein_id="YP_001569768.1"
+ /db_xref="GI:161502656"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MVSTISPSSGEYLLEMRGINKSFPGVKALDNVNLNVRPHSIHAL
+ MGENGAGKSTLLKCLFGIYQKDSGSIIFQGKEVDFHSAKEALENGISMVHQELNLVLQ
+ RSVMDNMWLGRYPTKGMFVDQDKMYQDTKAIFDELDINIDPRARVGTLSVSQMQMIEI
+ AKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDE
+ ITILRDGQWIATQPLEGLDMNKIIAMMVGRSLNQRFPDKENKPGEVILEVRNLTSLRQ
+ PSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSSGTITLHGKKINNHNANE
+ AINHGFALVTEERRSTGIYAYLDIGFNSLISNIHNYKNKVGLLDNSRMKSDTQWVIDS
+ MRVKTPGHRTLIGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIA
+ ELAKKGKGIIIISSEMPELLGITDRILVMSNGLVSGIVDTKTTTQNEILRLASLHL"
+ misc_feature 723802..724452
+ /locus_tag="SARI_00703"
+ /note="First domain of the ATP-binding cassette component
+ of monosaccharide transport system; Region:
+ ABC_Carb_Monos_I; cd03216"
+ /db_xref="CDD:213183"
+ misc_feature 723808..725280
+ /locus_tag="SARI_00703"
+ /note="galactose/methyl galaxtoside transporter
+ ATP-binding protein; Provisional; Region: PRK10982"
+ /db_xref="CDD:182880"
+ misc_feature 723898..723921
+ /locus_tag="SARI_00703"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213183"
+ misc_feature order(723907..723912,723916..723924,724144..724146,
+ 724282..724287,724381..724383)
+ /locus_tag="SARI_00703"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213183"
+ misc_feature order(724036..724041,724141..724146)
+ /locus_tag="SARI_00703"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213183"
+ misc_feature 724210..724239
+ /locus_tag="SARI_00703"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213183"
+ misc_feature 724270..724287
+ /locus_tag="SARI_00703"
+ /note="Walker B; other site"
+ /db_xref="CDD:213183"
+ misc_feature 724294..724305
+ /locus_tag="SARI_00703"
+ /note="D-loop; other site"
+ /db_xref="CDD:213183"
+ misc_feature 724369..724389
+ /locus_tag="SARI_00703"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213183"
+ misc_feature 724546..725208
+ /locus_tag="SARI_00703"
+ /note="Second domain of the ATP-binding cassette component
+ of monosaccharide transport system; Region:
+ ABC_Carb_Monos_II; cd03215"
+ /db_xref="CDD:213182"
+ gene 725299..726309
+ /gene="mglC"
+ /locus_tag="SARI_00704"
+ CDS 725299..726309
+ /gene="mglC"
+ /locus_tag="SARI_00704"
+ /inference="protein motif:HMMPfam:IPR001851"
+ /inference="similar to AA sequence:REFSEQ:NP_461133.1"
+ /note="ABC transporter; functions in galactose transport;
+ part of MglA2C2B transporter complex"
+ /codon_start=1
+ /transl_table=11
+ /product="beta-methylgalactoside transporter inner
+ membrane component"
+ /protein_id="YP_001569769.1"
+ /db_xref="GI:161502657"
+ /db_xref="InterPro:IPR001851"
+ /translation="MSVLNKKSFLTYLKEGGIYVVLLVLLAIIIFQDPTFLSLLNLSN
+ ILTQSSVRIIIALGVAGLIVTQGTDLSAGRQVGLAAVVAATLLQSMENANKVFPEMAT
+ MPIAVVILVVCAIGAVIGLVNGIIIAYLNVTPFITTLGTMIIVYGINSLYYDFVGASP
+ ISGFDSGFSTFAQGFVAMGSFRLSYITFYALIAVAFVWVLWNKTRFGKNIFAIGGNPE
+ AAKVSGVNVALNLLMIYALSGVFYAFGGLLEAGRIGSATNNLGFMYELDAIAACVVGG
+ VSFSGGVGTVFGVVTGVIIFTVINYGLTYIGVNPYWQYIIKGGIIIFAVALDSLKYAR
+ KK"
+ misc_feature 725419..726273
+ /gene="mglC"
+ /locus_tag="SARI_00704"
+ /note="Branched-chain amino acid transport system /
+ permease component; Region: BPD_transp_2; pfam02653"
+ /db_xref="CDD:217165"
+ misc_feature 725443..726282
+ /gene="mglC"
+ /locus_tag="SARI_00704"
+ /note="Transmembrane subunit (TM) of Escherichia coli AraH
+ and related proteins. E. coli AraH is the TM of a
+ Periplasmic Binding Protein (PBP)-dependent ATP-Binding
+ Cassette (ABC) transporter involved in the uptake of the
+ monosaccharide arabinose. This group...; Region:
+ TM_PBP1_transp_AraH_like; cd06579"
+ /db_xref="CDD:119321"
+ misc_feature 725950..726006
+ /gene="mglC"
+ /locus_tag="SARI_00704"
+ /note="TM-ABC transporter signature motif; other site"
+ /db_xref="CDD:119321"
+ gene complement(726358..726573)
+ /locus_tag="SARI_00705"
+ CDS complement(726358..726573)
+ /locus_tag="SARI_00705"
+ /inference="protein motif:HMMPfam:IPR001450"
+ /inference="protein motif:ScanRegExp:IPR001450"
+ /inference="similar to AA sequence:INSD:AAL21091.1"
+ /note="'KEGG: eco:b2147 8.0e-19 yeiA, yeiA';
+ dihydropyrimidine dehydrogenase;
+ COG: COG1146 Ferredoxin;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569770.1"
+ /db_xref="GI:161502658"
+ /db_xref="InterPro:IPR001450"
+ /translation="MVLKTGGTTIGLANNNIIPAEDLDRSYIVYPQINQEKCVGCLLC
+ GHVCPVACIDLGEVRFKKGEKEHALTL"
+ misc_feature complement(726412..726483)
+ /locus_tag="SARI_00705"
+ /note="4Fe-4S binding domain; Region: Fer4; cl02805"
+ /db_xref="CDD:243197"
+ gene complement(726564..727370)
+ /locus_tag="SARI_00706"
+ CDS complement(726564..727370)
+ /locus_tag="SARI_00706"
+ /inference="protein motif:HMMPfam:IPR001584"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:INSD:CAG74556.1"
+ /note="'KEGG: nwi:Nwi_1143 0.00014 helix-turn-helix,
+ fis-type K00986;
+ COG: COG2801 Transposase and inactivated derivatives;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569771.1"
+ /db_xref="GI:161502659"
+ /db_xref="InterPro:IPR001584"
+ /db_xref="InterPro:IPR012337"
+ /translation="MTEHQTSERRGCRIIGISQSLLHYRPNAERDIPVIEALQDLAHH
+ YPAYGFGLMFNKLRQAGLAWNKKRVYRIYCRLKLNLRRKGKKRLPNRNPQPLAVPINM
+ NHCWSVDFMSDALMDGRRFRLFNVVDDFNREALAVEVDLNIPAHRVVRVLERLSAERG
+ YPAFIRSDNGPELTAAVLSEWAEQHGVILDFIQPGKPMQNGFIERFNKTLRTEILDMY
+ LFRTRSEVRELTENWRTEYNEERPHSSPGGIPPVTYARQKLAGDSNWQWY"
+ misc_feature complement(726597..727298)
+ /locus_tag="SARI_00706"
+ /note="insertion element IS2 transposase InsD;
+ Provisional; Region: PRK14702"
+ /db_xref="CDD:237792"
+ misc_feature complement(726729..727064)
+ /locus_tag="SARI_00706"
+ /note="Integrase core domain; Region: rve; pfam00665"
+ /db_xref="CDD:216050"
+ misc_feature complement(726618..726818)
+ /locus_tag="SARI_00706"
+ /note="Integrase core domain; Region: rve_3; pfam13683"
+ /db_xref="CDD:222316"
+ gene complement(727406..727672)
+ /locus_tag="SARI_00707"
+ CDS complement(727406..727672)
+ /locus_tag="SARI_00707"
+ /inference="protein motif:HMMPfam:IPR002514"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:INSD:CAG74557.1"
+ /note="'COG: COG2801 Transposase and inactivated
+ derivatives;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569772.1"
+ /db_xref="GI:161502660"
+ /db_xref="InterPro:IPR002514"
+ /db_xref="InterPro:IPR009057"
+ /translation="MKKIRFTESQILRVQKEVEGGRHVKEVCRENGVSEASYDNWKSK
+ YGGMESPDIKRMKELEEENRRLKQMYASLSLDHEILKDVVAKKL"
+ misc_feature complement(727460..727669)
+ /locus_tag="SARI_00707"
+ /note="Transposase; Region: HTH_Tnp_1; pfam01527"
+ /db_xref="CDD:201841"
+ gene 727930..728103
+ /locus_tag="SARI_00708"
+ CDS 727930..728103
+ /locus_tag="SARI_00708"
+ /inference="protein motif:HMMPfam:IPR009956"
+ /inference="similar to AA sequence:REFSEQ:YP_308782.1"
+ /note="'COG: COG5302 Post-segregation antitoxin (ccd
+ killing mechanism protein) encoded by the F plasmid;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569773.1"
+ /db_xref="GI:161502661"
+ /db_xref="InterPro:IPR009956"
+ /translation="MLKAYDVNISRLVSTTMQHEARRLRAKRWQAENQEGMAEVALFI
+ ETNGSFADENRDW"
+ misc_feature <727930..728100
+ /locus_tag="SARI_00708"
+ /note="Post-segregation antitoxin CcdA; Region: CcdA;
+ cl02188"
+ /db_xref="CDD:242925"
+ gene 728186..728344
+ /locus_tag="SARI_00709"
+ CDS 728186..728344
+ /locus_tag="SARI_00709"
+ /inference="protein motif:BlastProDom:IPR002712"
+ /inference="protein motif:Gene3D:IPR002712"
+ /inference="protein motif:HMMPfam:IPR002712"
+ /inference="protein motif:superfamily:IPR011067"
+ /note="'COG: NOG11316 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569774.1"
+ /db_xref="GI:161502662"
+ /db_xref="InterPro:IPR002712"
+ /db_xref="InterPro:IPR011067"
+ /translation="MVIPLARALLLSDKVSRELYPVVHIGEESYRLMTTDILMSLLTH
+ LVMSLFLA"
+ misc_feature <728186..>728296
+ /locus_tag="SARI_00709"
+ /note="CcdB protein; Region: CcdB; cl03380"
+ /db_xref="CDD:194609"
+ gene 728378..728584
+ /locus_tag="SARI_00710"
+ CDS 728378..728584
+ /locus_tag="SARI_00710"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569775.1"
+ /db_xref="GI:161502663"
+ /translation="MLVTMSDKELSRINVIQSVVEKRMLRRNAAHQLNNWLRTRWMNW
+ NEVENGTGVKKCLSDVHRPVFRNK"
+ gene complement(728640..729440)
+ /locus_tag="SARI_00711"
+ CDS complement(728640..729440)
+ /locus_tag="SARI_00711"
+ /inference="protein motif:HMMPfam:IPR010846"
+ /inference="similar to AA sequence:INSD:AAL21912.1"
+ /note="'COG: NOG10019 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569776.1"
+ /db_xref="GI:161502664"
+ /db_xref="InterPro:IPR010846"
+ /translation="MKVKVWTVLFMSAYLTACAAPGPEKYQTIMDSVTAEKVNKIIRS
+ DVIPSSGENHGEVISRVSSAFLGTPYQADTLIGGPDTPESLVVNFNGVDCFTLADYVE
+ ALTRSHDQKSFLHNLTEVRYTGGNVDYLSRRHFFSDWFATTPRNARDVTPDISPDYTT
+ ADKQLNRKPDGGEYIPGLGIHSRKINYIPGKAISQQVLDQMRNGDYVGVYSPLEGLDV
+ SHVGIVVRHDGQVWFRNASSLAANRKVVDSPFLEYMRAKPGIVVLRAE"
+ misc_feature complement(728664..729257)
+ /locus_tag="SARI_00711"
+ /note="Protein of unknown function (DUF1460); Region:
+ DUF1460; pfam07313"
+ /db_xref="CDD:219371"
+ gene complement(729606..729773)
+ /locus_tag="SARI_00712"
+ CDS complement(729606..729773)
+ /locus_tag="SARI_00712"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569777.1"
+ /db_xref="GI:161502665"
+ /translation="MQIYQPGSKTRGKGGCTVLEPVVVTTINLGFYAGTAEISDNHSQ
+ SGITEQSAPTR"
+ gene complement(730316..730561)
+ /locus_tag="SARI_00713"
+ CDS complement(730316..730561)
+ /locus_tag="SARI_00713"
+ /inference="similar to AA sequence:INSD:AAO68368.1"
+ /note="'COG: NOG13896 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569778.1"
+ /db_xref="GI:161502666"
+ /translation="MIMDVQTIFVALAFLLLPLFCFREAWKGWRTGAVDKIVKNTREP
+ VYVYRHADPIQYWSYLFLYTGCGFLFTGMIFYFLFYR"
+ misc_feature complement(730319..730555)
+ /locus_tag="SARI_00713"
+ /note="Protein of unknown function (DUF2542); Region:
+ DUF2542; pfam10808"
+ /db_xref="CDD:151258"
+ gene complement(730558..731277)
+ /locus_tag="SARI_00714"
+ CDS complement(730558..731277)
+ /locus_tag="SARI_00714"
+ /inference="protein motif:HMMPfam:IPR003848"
+ /inference="similar to AA sequence:INSD:AAL21088.1"
+ /note="'COG: COG2949 Uncharacterized membrane protein;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569779.1"
+ /db_xref="GI:161502667"
+ /db_xref="InterPro:IPR003848"
+ /translation="MLKRVFYSLLFLVGLLLLTVLGLDRWMSWKTAPYIYDELQDLPY
+ RQVGVVLGTAKYYRKGVINQYYRYRIQGALNAYNSGKVNYLLLSGDNALQSYNEPMTM
+ RKDLIAAGVDPADIVLDYAGFRTLDSIVRTRKVFDTNDFIIITQRFHCERALFIALHM
+ GIQAQCYAVPSPKNMLTVRLREFGARFSALADLYIFKREPRFLGPLVPIPTQHQVPND
+ AQGYPAVTPEQLLELEKKKGK"
+ misc_feature complement(730720..731142)
+ /locus_tag="SARI_00714"
+ /note="YdcF-like. YdcF-like is a large family of mainly
+ bacterial proteins, with a few members found in fungi,
+ plants, and archaea. Escherichia coli YdcF has been shown
+ to bind S-adenosyl-L-methionine (AdoMet), but a
+ biochemical function has not been...; Region: YdcF-like;
+ cd06259"
+ /db_xref="CDD:99750"
+ misc_feature complement(order(730732..730734,730822..730824,
+ 730831..730833,730843..730845,730894..730896,
+ 730903..730905))
+ /locus_tag="SARI_00714"
+ /note="putative active site [active]"
+ /db_xref="CDD:99750"
+ gene 731548..732036
+ /locus_tag="SARI_00715"
+ CDS 731548..732036
+ /locus_tag="SARI_00715"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:INSD:AAP70294.1"
+ /note="'COG: COG3335 Transposase and inactivated
+ derivatives;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569780.1"
+ /db_xref="GI:161502668"
+ /db_xref="InterPro:IPR009057"
+ /translation="MQKTIHKTHDKNHARRLTAILMLHWDECVSDVARTLYCARSSVG
+ RWINWFTLSGIEGLVSLPAGRGRQWPYEHICALLRQLVKHTLGDFGYQRSRWSTELLA
+ IKINEITGCQLHAGTLRRWLPAAGLVWRRAAPTLRIRVAHKLFMPETCVYVNKSALRQ
+ IQ"
+ misc_feature 731575..731724
+ /locus_tag="SARI_00715"
+ /note="Homeodomain-like domain; Region: HTH_23; pfam13384"
+ /db_xref="CDD:222091"
+ misc_feature 731593..731925
+ /locus_tag="SARI_00715"
+ /note="Winged helix-turn helix; Region: HTH_29; pfam13551"
+ /db_xref="CDD:222216"
+ misc_feature 731671..731913
+ /locus_tag="SARI_00715"
+ /note="Homeodomain-like domain; Region: HTH_32; pfam13565"
+ /db_xref="CDD:222226"
+ gene complement(732042..734006)
+ /locus_tag="SARI_00717"
+ CDS complement(732042..734006)
+ /locus_tag="SARI_00717"
+ /note="'KEGG: cab:CAB679 0.0083 asd;
+ aspartate-semialdehyde dehydrogenase K00133;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569781.1"
+ /db_xref="GI:161502670"
+ /translation="MPRPVGNKEYVLIDMSFMQDDSVQKVVNVNNRSFQTINPADLPL
+ IGHSSSTSTLNDLLDHAEDRSFQSASSEYRGASSRSSSTLTLNDTLDSAENRLFQPIN
+ SDSLGLITRNSSTLTLNDLLDAMGTKATVSETAVNQYGDCLIKIPDDRIPAVNDEITY
+ TETRDTCVTIPEEILSPREADASDVCLEIDAKILKILTCSYQYQLDDIVGDIMPAESD
+ NAEKVRQIMRMYAEQYRHVYERSGYFYKAYMSLHKCVENLLPYSFRAGGNISFHLLLQ
+ ALFFDGKYNNAALIRETIPTEPPAPITMKPDAFFNSILSLNLSQVKLFGDVISALLFH
+ FPTIFYQYPKLRDEINQCIEKRAVTGSVVARLTLCLASTLLAIAPLVMLSGAMSVGTI
+ LRHVGRGISYVDIPIVLIILGESWYQAYKFGSSSNEKAAQKFIAQEAAFKTTQRVLTQ
+ GLSLFSSLSGTIMRSVGKGTAPEMMLMFIINTLNLLLYQNPYEGTSVDGKALKRTAYL
+ AGNEEITVQTIALLVDLKSTGVITQRLFSCSDRLAYAINLRRTQPGDQVHILKEVISA
+ CARGHRAILQEKDKQICLTAIDHIYYGNFNPALLESIPEEFAAFLTYLNTLRKRDASC
+ LSLGNEVNEKIIATLIKVLSFRETVLLESA"
+ gene 733299..733394
+ /locus_tag="SARI_00716"
+ CDS 733299..733394
+ /locus_tag="SARI_00716"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569782.1"
+ /db_xref="GI:161502669"
+ /translation="MSVLFSVHSHYLADFFGVITLCWHDITDDII"
+ gene complement(734323..735207)
+ /locus_tag="SARI_00718"
+ CDS complement(734323..735207)
+ /locus_tag="SARI_00718"
+ /inference="protein motif:HMMPfam:IPR002125"
+ /inference="protein motif:HMMPfam:IPR013171"
+ /inference="protein motif:HMMTigr:IPR006263"
+ /inference="protein motif:ScanRegExp:IPR002125"
+ /inference="similar to AA sequence:SwissProt:Q8ZNM0"
+ /note="Reclaims exogenous and endogenous cytidine and
+ 2'-deoxycytidine molecules for UMP synthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="cytidine deaminase"
+ /protein_id="YP_001569783.1"
+ /db_xref="GI:161502671"
+ /db_xref="InterPro:IPR002125"
+ /db_xref="InterPro:IPR006263"
+ /db_xref="InterPro:IPR013171"
+ /translation="MHPRFQTAFAQLADNLQSALAPILADHHFPAMLAAEQVSTLKNA
+ TGLDEDALAFALLPLAAACARTDLSHFNVGAIARGVSGNWYFGANMEFLGATMQQTVH
+ AEQSAISHAWLCGEKGLAAVTVNYTPCGHCRQFMNELNSGLDLRIHLPGRAPHTLRDY
+ LPDAFGPKDLEIKTLLMDEQDHGFALTGDTLTQAAITAANKSHMPYSQSPSGVALECK
+ DGRIFTGSYAENAAFNPTLPPLQGALNLLSLNGYDYPDIQRAILAEKGDAALIQWDAT
+ AATLKALGCHNIDRVLLG"
+ misc_feature complement(734329..735207)
+ /locus_tag="SARI_00718"
+ /note="cytidine deaminase; Provisional; Region: PRK09027"
+ /db_xref="CDD:181614"
+ misc_feature complement(734752..735003)
+ /locus_tag="SARI_00718"
+ /note="Cytidine deaminase zinc-binding domain. These
+ enzymes are Zn dependent. The zinc ion in the active site
+ plays a central role in the proposed catalytic mechanism,
+ activating a water molecule to form a hydroxide ion that
+ performs a nucleophilic attack on...; Region:
+ cytidine_deaminase; cd01283"
+ /db_xref="CDD:238610"
+ misc_feature complement(order(734812..734814,734821..734823,
+ 734896..734904,734935..734937,734941..734943,
+ 734989..734991,734995..734997))
+ /locus_tag="SARI_00718"
+ /note="active site"
+ /db_xref="CDD:238610"
+ misc_feature complement(order(734812..734814,734821..734826,
+ 734896..734904))
+ /locus_tag="SARI_00718"
+ /note="catalytic motif [active]"
+ /db_xref="CDD:238610"
+ misc_feature complement(order(734812..734814,734821..734823,
+ 734896..734898,734902..734904))
+ /locus_tag="SARI_00718"
+ /note="Zn binding site [ion binding]; other site"
+ /db_xref="CDD:238610"
+ misc_feature complement(<734425..734631)
+ /locus_tag="SARI_00718"
+ /note="Cytidine deaminase zinc-binding domain. These
+ enzymes are Zn dependent. The zinc ion in the active site
+ plays a central role in the proposed catalytic mechanism,
+ activating a water molecule to form a hydroxide ion that
+ performs a nucleophilic attack on...; Region:
+ cytidine_deaminase; cd01283"
+ /db_xref="CDD:238610"
+ misc_feature complement(order(734488..734496,734521..734523,
+ 734527..734529,734575..734577,734581..734583))
+ /locus_tag="SARI_00718"
+ /note="active site"
+ /db_xref="CDD:238610"
+ misc_feature complement(734488..734496)
+ /locus_tag="SARI_00718"
+ /note="catalytic motif [active]"
+ /db_xref="CDD:238610"
+ misc_feature complement(order(734488..734490,734494..734496))
+ /locus_tag="SARI_00718"
+ /note="Zn binding site [ion binding]; other site"
+ /db_xref="CDD:238610"
+ gene complement(735361..736056)
+ /locus_tag="SARI_00719"
+ CDS complement(735361..736056)
+ /locus_tag="SARI_00719"
+ /inference="protein motif:HMMPfam:IPR007300"
+ /inference="protein motif:HMMTigr:IPR005261"
+ /inference="similar to AA sequence:INSD:AAL21086.1"
+ /note="'KEGG: bcz:BCZK3376 8.7e-30 murein hydrolase export
+ regulator K01238;
+ COG: COG1346 Putative effector of murein hydrolase;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569784.1"
+ /db_xref="GI:161502672"
+ /db_xref="InterPro:IPR005261"
+ /db_xref="InterPro:IPR007300"
+ /translation="MMSYIWWSLPLTLAVFFAARRLAAHFKMPLLNPLLVAMVVIIPF
+ LLLTGIPYDHYFKGSEVLNDLLQPAVVALAYPLYEQLHQIRARWKSIISICFVGSMVA
+ MITGTSVALLMGATPEIAASVLPKSVTTPIAMAVGGSIGGIPAISAVCVIFVGILGAV
+ FGHTLLNAMRIRTKAARGLAMGTASHALGTARCAELDYQEGAFSSLALVICGIITSLA
+ APFLFPLILAVMR"
+ misc_feature complement(735409..736056)
+ /locus_tag="SARI_00719"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10711"
+ /db_xref="CDD:182666"
+ gene complement(736053..736451)
+ /locus_tag="SARI_00720"
+ CDS complement(736053..736451)
+ /locus_tag="SARI_00720"
+ /inference="protein motif:BlastProDom:IPR005538"
+ /inference="protein motif:HMMPfam:IPR005538"
+ /inference="similar to AA sequence:SwissProt:P60636"
+ /note="'KEGG: btk:BT9727_3424 1.9e-11 murein hydrolase
+ exporter K06518;
+ COG: COG1380 Putative effector of murein hydrolase LrgA;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569785.1"
+ /db_xref="GI:161502673"
+ /db_xref="InterPro:IPR005538"
+ /translation="MSKSLNIIWQYIRAFVLIYACLYAGIFIASLLPITIPGSIIGML
+ ILFVLLALQILPAKWVNPGCYVLIRYMALLFVPIGVGVMQYFDLLRAQFGPVVVSCAI
+ STLVVFVVVSWSSHLIHGERNVVGQKGSKK"
+ misc_feature complement(736056..736451)
+ /locus_tag="SARI_00720"
+ /note="hypothetical protein; Provisional; Region:
+ PRK01821"
+ /db_xref="CDD:234983"
+ gene complement(736583..737491)
+ /locus_tag="SARI_00721"
+ CDS complement(736583..737491)
+ /locus_tag="SARI_00721"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="protein motif:HMMPfam:IPR005119"
+ /inference="similar to AA sequence:INSD:AAX66103.1"
+ /note="'KEGG: shn:Shewana3_3435 2.6e-10 transcriptional
+ regulator, LysR family K06022;
+ COG: COG0583 Transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569786.1"
+ /db_xref="GI:161502674"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR005119"
+ /db_xref="InterPro:IPR011991"
+ /translation="MANWAQKLKLHHLQTLVALGEQGNLTHVARMMNISQPALSKWLS
+ QLEDEIGITLFERHSKGLRPSEGGKLLLQHAQRLINDLERSQYEIARFKQGGLVGSLK
+ IGCSPVATDCVSQAILSLLNEMPTLHLNIEEKVMTPLLHDLLVGQVDVVVGRVGGRAL
+ QLPLNYQVLYTEPVCFVARPHHPLAARAQIAWSDLAHWRWIVWPTGTPIRISIDNALV
+ DNGVMLPENTIESASMNVSTSLLQSSDMISILSLRLAQRYASQGQLAILNLPKIEQKG
+ SVGMFCRKNETPSLALSRFLYFLAQV"
+ misc_feature complement(736607..737476)
+ /locus_tag="SARI_00721"
+ /note="pca operon transcription factor PcaQ; Region:
+ TF_pcaQ; TIGR02424"
+ /db_xref="CDD:233862"
+ misc_feature complement(737285..737464)
+ /locus_tag="SARI_00721"
+ /note="Bacterial regulatory helix-turn-helix protein, lysR
+ family; Region: HTH_1; pfam00126"
+ /db_xref="CDD:215735"
+ misc_feature complement(<736880..737194)
+ /locus_tag="SARI_00721"
+ /note="The substrate binding domain of LysR-type
+ transcriptional regulators (LTTRs), a member of the type 2
+ periplasmic binding fold protein superfamily; Region:
+ PBP2_LTTR_substrate; cl11398"
+ /db_xref="CDD:245600"
+ misc_feature complement(order(737093..737113,737117..737119,
+ 737129..737131,737138..737143,737147..737152))
+ /locus_tag="SARI_00721"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:176102"
+ misc_feature complement(736604..>737002)
+ /locus_tag="SARI_00721"
+ /note="The substrate binding domain of LysR-type
+ transcriptional regulators (LTTRs), a member of the type 2
+ periplasmic binding fold protein superfamily; Region:
+ PBP2_LTTR_substrate; cl11398"
+ /db_xref="CDD:245600"
+ gene 737617..738189
+ /locus_tag="SARI_00722"
+ CDS 737617..738189
+ /locus_tag="SARI_00722"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="similar to AA sequence:REFSEQ:NP_456738.1"
+ /note="'KEGG: cal:orf19.6005 1.8e-05 STL13; sugar
+ transporter K01804;
+ COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569787.1"
+ /db_xref="GI:161502675"
+ /db_xref="InterPro:IPR011701"
+ /translation="MAQRRDLQALIHAAPVGKMQCRVIICCFLVVMLDGFDTAAIGFI
+ APDTRTHWQLSASELMPLFGAGLLELTAGALLCGPLADRFGRKRVIELCVALFGALSL
+ LSAFSPGIETLVLLRFLTGLGLGVAMPNTITMTSEYLPTRRRGALVTLMFCDFTLGSA
+ MGSYGVDLNCGWTKFMKDQLSTIASSNNLN"
+ misc_feature 737686..>738105
+ /locus_tag="SARI_00722"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature order(737728..737730,737737..737745,737749..737754,
+ 737803..737805,737812..737817,737824..737826,
+ 737836..737841,737845..737850,737986..737991,
+ 737998..738003,738010..738015,738022..738024,
+ 738058..738063,738070..738075,738091..738093)
+ /locus_tag="SARI_00722"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene 738479..739123
+ /locus_tag="SARI_00723"
+ CDS 738479..739123
+ /locus_tag="SARI_00723"
+ /inference="similar to AA sequence:INSD:EAS38616.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569788.1"
+ /db_xref="GI:161502676"
+ /translation="MGEGSNDKALPVSDTDSGLVIDLDLTQSYDIDVKLAEQTSEATP
+ VGQRFTGEKSNDGGSVKYPAHFTLKRLLYKLVQSKGQCYLEKKIGFKGQDFSDLPENG
+ AELFVEFANVKPWMDGARRIFWGFISDVGQTNDGKIWLNAGNIKSGLSVCIQQDIASA
+ FREQFKVVNSLDELDGCHALIIGKCLYATTGKPILWCGDLSYVVLRRYKSDQEL"
+ gene 739194..740111
+ /locus_tag="SARI_00724"
+ CDS 739194..740111
+ /locus_tag="SARI_00724"
+ /inference="protein motif:HMMPfam:IPR001269"
+ /inference="protein motif:HMMPIR:IPR001269"
+ /inference="protein motif:ScanRegExp:IPR001269"
+ /inference="similar to AA sequence:REFSEQ:YP_217178.1"
+ /note="'KEGG: sec:SC2191 4.5e-145 yohI; putative nitrogen
+ regulation protein K05541;
+ COG: COG0042 tRNA-dihydrouridine synthase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="tRNA-dihydrouridine synthase C"
+ /protein_id="YP_001569789.1"
+ /db_xref="GI:161502677"
+ /db_xref="InterPro:IPR001269"
+ /translation="MEGVLDSLVRELLTEVNDYDHCITEFLRVVDQLLPEKSFYRLCP
+ ELHNHSRTKSGTLVRIQLLGQHPGWLAENAVRAVELGSHGVDLNCGCPSKLVNGSGGG
+ ATLLKDPELIYRGAKAMREAVPAHLPVTVKVRLGWDSDARQFEIADAVQQAGATELVV
+ HGRTKEDGYKAECINWSAIGEIRNRLTIPVIANGEIWDWQSAQACMATSGCDAVMIGR
+ GALNIPNLSRVVKYNEPRMPWPEVVTLLQKYTRLEKQGDTGLYHVARIKQWLGYLRKE
+ YVEATALFQSIRALNRSSEIARAIQAIKI"
+ misc_feature 739194..740108
+ /locus_tag="SARI_00724"
+ /note="tRNA-dihydrouridine synthase C; Provisional;
+ Region: PRK10550"
+ /db_xref="CDD:236713"
+ misc_feature 739194..739895
+ /locus_tag="SARI_00724"
+ /note="Dihydrouridine synthase-like (DUS-like) FMN-binding
+ domain. Members of this family catalyze the reduction of
+ the 5,6-double bond of a uridine residue on tRNA.
+ Dihydrouridine modification of tRNA is widely observed in
+ prokaryotes and eukaryotes, and also...; Region:
+ DUS_like_FMN; cd02801"
+ /db_xref="CDD:239200"
+ misc_feature order(739194..739196,739269..739271,739374..739376,
+ 739455..739457,739587..739589,739674..739676,
+ 739770..739772,739776..739778,739842..739847)
+ /locus_tag="SARI_00724"
+ /note="FMN binding site [chemical binding]; other site"
+ /db_xref="CDD:239200"
+ misc_feature order(739374..739376,739464..739469,739587..739589,
+ 739593..739595,739671..739676,739680..739685,
+ 739773..739778,739845..739847)
+ /locus_tag="SARI_00724"
+ /note="active site"
+ /db_xref="CDD:239200"
+ misc_feature order(739464..739466,739593..739595,739674..739676,
+ 739680..739682)
+ /locus_tag="SARI_00724"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:239200"
+ misc_feature order(739467..739469,739587..739589,739671..739673,
+ 739683..739685,739773..739778)
+ /locus_tag="SARI_00724"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:239200"
+ gene complement(740182..740379)
+ /locus_tag="SARI_00725"
+ CDS complement(740182..740379)
+ /locus_tag="SARI_00725"
+ /inference="similar to AA sequence:INSD:AAL21077.1"
+ /note="'COG: NOG33037 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569790.1"
+ /db_xref="GI:161502678"
+ /translation="MNNFTVIRADGLHRLNAAVSSETADGLILSYTLFVFTNKGTNNE
+ NSSMGNFNYFSDWAVSGNGRV"
+ gene 740570..742006
+ /locus_tag="SARI_00726"
+ CDS 740570..742006
+ /locus_tag="SARI_00726"
+ /inference="protein motif:HMMPfam:IPR003423"
+ /inference="protein motif:HMMTigr:IPR010131"
+ /inference="similar to AA sequence:INSD:AAL21076.1"
+ /note="'may be involved in resistance to puromycin,
+ acriflavine and tetraphenylarsonium chloride'"
+ /codon_start=1
+ /transl_table=11
+ /product="multidrug resistance outer membrane protein
+ MdtQ"
+ /protein_id="YP_001569791.1"
+ /db_xref="GI:161502679"
+ /db_xref="InterPro:IPR003423"
+ /db_xref="InterPro:IPR010131"
+ /translation="MNRNTFLAATASLPLFILLAGCAPVHDTRQSLTQQTPSSHIDST
+ LPTALKNGWPDSQWWKAYHDAQLDALIDNAIQHSPDMQVAEQRIQLAEAQAKAVEAQD
+ GPQLDFSADVERQRMSAEGLMGPFAITDPAAGTTGPWYTNGTFGLTAGWDLDLWGKNR
+ AEVTARIGAVKAREAEQEQTRQLLASGVARLYWEWQTQAALKNVLTQIEHEQQNVVAV
+ NRELYQHGITSSVEGVETDIDASKTQQQLNDVNGKMKVIEARLSALTNTQSAALKLRQ
+ VRLPAIESQLPTQLGYSLLARRADLQAAHWYIESSLSSIDAAKAAFYPDINLMAFLQQ
+ DALHLSDLFRHSAQQYGITGGLTLPIFDSGRLNANLDIAKAQSNLSIANYNKAVVDAV
+ NDVARTASQVETLAQKNQHQQQIEHDAQRVVGLAQARFNAGIIAGSRVSEAKIPALRE
+ QCNGLLLQGQWLDASIQLTSALGGGYHS"
+ misc_feature 740570..742003
+ /locus_tag="SARI_00726"
+ /note="multidrug resistance outer membrane protein MdtQ;
+ Provisional; Region: PRK11459"
+ /db_xref="CDD:183143"
+ gene 742051..742833
+ /locus_tag="SARI_00727"
+ CDS 742051..742833
+ /locus_tag="SARI_00727"
+ /inference="protein motif:HMMPanther:IPR002347"
+ /inference="protein motif:HMMPfam:IPR002198"
+ /inference="protein motif:ScanRegExp:IPR002198"
+ /inference="similar to AA sequence:REFSEQ:NP_461116.1"
+ /note="'KEGG: stm:STM2171 7.1e-131 yohF; oxidoreductase;
+ COG: COG1028 Dehydrogenases with different specificities
+ (related to short-chain alcohol dehydrogenases);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="acetoin dehydrogenase"
+ /protein_id="YP_001569792.1"
+ /db_xref="GI:161502680"
+ /db_xref="InterPro:IPR002198"
+ /db_xref="InterPro:IPR002347"
+ /translation="MIHPERTMTKVAIVTASDSGIGKTCALLLAQNGFDMGITWHSDE
+ RGAQETAKKAAQFGVRAETIHLDLSQLPEGAQAIEHLIQRLGRVDVLVNNAGAMTKSA
+ FIDMPFTQWRQIFTVDVDGAFLCAQIAARHMIKQGEGGRIINITSVHEHTPLPQASAY
+ TAAKHALGGLTKSMALELIEHHILVNAVAPGAIATPMNDMDDSDIEPGSEPSIPIARP
+ GSTYEIASLVAWLCSEGASYTTGQSLIVDGGFMLANPQFNAK"
+ misc_feature 742072..742830
+ /locus_tag="SARI_00727"
+ /note="oxidoreductase; Provisional; Region: PRK12743"
+ /db_xref="CDD:237187"
+ misc_feature 742084..742791
+ /locus_tag="SARI_00727"
+ /note="classical (c) SDRs; Region: SDR_c; cd05233"
+ /db_xref="CDD:212491"
+ misc_feature order(742096..742098,742102..742113,742168..742176,
+ 742246..742254,742330..742338,742399..742401,
+ 742483..742491,742528..742530,742540..742542,
+ 742618..742629,742633..742638)
+ /locus_tag="SARI_00727"
+ /note="NAD(P) binding site [chemical binding]; other site"
+ /db_xref="CDD:212491"
+ misc_feature order(742402..742404,742489..742491,742528..742530,
+ 742540..742542)
+ /locus_tag="SARI_00727"
+ /note="active site"
+ /db_xref="CDD:212491"
+ gene complement(742881..743477)
+ /locus_tag="SARI_00728"
+ CDS complement(742881..743477)
+ /locus_tag="SARI_00728"
+ /inference="similar to AA sequence:INSD:AAL21074.1"
+ /note="'KEGG: oih:OB2407 0.0015 alkaline phosphatase
+ K01077;
+ COG: COG0586 Uncharacterized membrane-associated protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569793.1"
+ /db_xref="GI:161502681"
+ /translation="MLNAGGGLRMDINTLITHYGYAALVIGSMAEGETVTLLGGVAAH
+ QGLLKFPLVAAAVALGGMMGDQLLYLLGRCYGGKILRRFSRYHTKIRHAQKMIQRHPY
+ LFVIGTRFMYGFRVVGPLLIGASRLPPKIFLPLNIVGALIWALLFTTLGYLGGEVIAP
+ WLHDLDQHLRHGIWLILAIVLVVGVRWWLKRRGKAEAR"
+ misc_feature complement(742884..743459)
+ /locus_tag="SARI_00728"
+ /note="Uncharacterized membrane-associated protein
+ [Function unknown]; Region: DedA; COG0586"
+ /db_xref="CDD:223659"
+ misc_feature complement(743019..>743285)
+ /locus_tag="SARI_00728"
+ /note="SNARE associated Golgi protein; Region:
+ SNARE_assoc; pfam09335"
+ /db_xref="CDD:220186"
+ gene 743651..744196
+ /locus_tag="SARI_00729"
+ CDS 743651..744196
+ /locus_tag="SARI_00729"
+ /inference="protein motif:HMMPfam:IPR009698"
+ /inference="similar to AA sequence:INSD:AAO68384.1"
+ /note="'COG: NOG06773 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569794.1"
+ /db_xref="GI:161502682"
+ /db_xref="InterPro:IPR009698"
+ /translation="MQVIKSENETVSHHYTHHVLLMAAIPVVCAFIGTTQIGWNFGDG
+ NVLQLSLFTAFALAVLFYGVMLAGVAVMGRVIWWMARNYPQRPSLARCMVFAGYVATP
+ LFLSGLVALYPLVWLCALVGAVALFYTGYLLYLGIPTFLNINREEGLSFSSSTLAIGV
+ LVLEVLLAITVILWGYGYRLF"
+ misc_feature 743660..744139
+ /locus_tag="SARI_00729"
+ /note="Protein of unknown function (DUF1282); Region:
+ DUF1282; pfam06930"
+ /db_xref="CDD:219231"
+ gene 744361..745308
+ /gene="pbpG"
+ /locus_tag="SARI_00730"
+ CDS 744361..745308
+ /gene="pbpG"
+ /locus_tag="SARI_00730"
+ /inference="protein motif:HMMPfam:IPR001967"
+ /inference="protein motif:superfamily:IPR012338"
+ /inference="similar to AA sequence:INSD:AAL21072.1"
+ /note="specifically hydrolyze the
+ DD-diaminopimelate-alanine bonds in high-molecular-mass
+ murein sacculi; Penicillin-binding protein 7"
+ /codon_start=1
+ /transl_table=11
+ /product="D-alanyl-D-alanine endopeptidase"
+ /protein_id="YP_001569795.1"
+ /db_xref="GI:161502683"
+ /db_xref="InterPro:IPR001967"
+ /db_xref="InterPro:IPR012338"
+ /translation="MLKFRASFLSLALMLAVPFAPQAVAKTAATTAASQPEIASGSAM
+ IVDLNTHKVIYSNHPDLVRPIASITKLMTAMVVLDARLPLDEILKVDISQTPEMKGVY
+ SRVRLNSEISRKNMLLLALMSSENRAAASLAHYYPGGYNAFIKAMNAKAKALGMTHTR
+ FVEPTGLSIHNVSTARDLTKLLIATKQYPLIGQLSITREDMATFSHPAYTLPFRNTNH
+ LVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW
+ IETGKVMPVPAAALSYKKQKAAQMAAASASAGAQTAQND"
+ misc_feature 744364..745230
+ /gene="pbpG"
+ /locus_tag="SARI_00730"
+ /note="D-alanyl-D-alanine endopeptidase; Provisional;
+ Region: pbpG; PRK11669"
+ /db_xref="CDD:236952"
+ misc_feature 744460..745146
+ /gene="pbpG"
+ /locus_tag="SARI_00730"
+ /note="D-alanyl-D-alanine carboxypeptidase; Region:
+ Peptidase_S11; pfam00768"
+ /db_xref="CDD:216107"
+ gene complement(745367..747082)
+ /locus_tag="SARI_00732"
+ CDS complement(745367..747082)
+ /locus_tag="SARI_00732"
+ /inference="protein motif:HMMPfam:IPR006094"
+ /inference="protein motif:ScanRegExp:IPR003006"
+ /note="'component of the membrane-bound D-lactate oxidase,
+ FAD-binding, NADH independent'"
+ /codon_start=1
+ /transl_table=11
+ /product="D-lactate dehydrogenase"
+ /protein_id="YP_001569796.2"
+ /db_xref="GI:448236203"
+ /db_xref="InterPro:IPR003006"
+ /db_xref="InterPro:IPR006094"
+ /translation="MTDNKTFLNELARLVGHSHLLTDPAKTARYRKGFRSGQGDALAV
+ VFPGSLLELWRVLNACVNADKIILMQAANTGLTEGSTPNGNDYDRDIVIISTQRLDKL
+ HLLDSGQQVLAWPGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQ
+ RGPAYTEMSLFARIDEQGKLQLVNHLGIDLGHTPEQILSKLDDERIKDEDVRHDGRHA
+ HDHDYVTRVRDINANTPARYNADPDRLFESSGCAGKLAVFAVRLDTFAAEKNQQVFYI
+ GTNQPAVLTEIRRHILANFNNLPVAGEYMHRDIYDIAEQYGKDTFLMIDKLGTDKMPF
+ FFTLKGRTDAMLEKVKFFRPHFTDRAMQKFGHLFPSHLPPRMKNWRDKYEHHLLLKMA
+ GDGVAEAQRWLNEFFKSAEGGFFACTPEEGSKAFLHRFAAAGAAIRYQAVHADEVEDI
+ LALDIALRRNDTDWFEHLPPEIDSQLVHKLYYGHFMCHVFHQDYIVKKGVDVHALKAQ
+ MLELLQARGAQYPAEHNVGHLYKAPETLTRFYRQNDPTNSMNPGIGKTSKRKFWQENA
+ PDEAH"
+ misc_feature complement(745391..747076)
+ /locus_tag="SARI_00732"
+ /note="D-lactate dehydrogenase; Provisional; Region:
+ PRK11183"
+ /db_xref="CDD:236872"
+ misc_feature complement(746600..746962)
+ /locus_tag="SARI_00732"
+ /note="FAD binding domain; Region: FAD_binding_4;
+ pfam01565"
+ /db_xref="CDD:216574"
+ misc_feature complement(745397..746266)
+ /locus_tag="SARI_00732"
+ /note="D-lactate dehydrogenase, membrane binding; Region:
+ Lact-deh-memb; pfam09330"
+ /db_xref="CDD:117872"
+ gene 747110..747244
+ /locus_tag="SARI_00731"
+ CDS 747110..747244
+ /locus_tag="SARI_00731"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569797.1"
+ /db_xref="GI:161502684"
+ /translation="MVGQNISVKHSALYDNTLSHSIYLCIGGIHTVYPSFSSGKCFEN
+ "
+ gene 747336..749651
+ /locus_tag="SARI_00733"
+ CDS 747336..749651
+ /locus_tag="SARI_00733"
+ /inference="protein motif:HMMPfam:IPR001764"
+ /inference="protein motif:HMMPfam:IPR002772"
+ /inference="protein motif:ScanRegExp:IPR001764"
+ /note="'KEGG: stm:STM2166 0. bglX; beta-D-glucoside
+ glucohydrolase, periplasmic K05349;
+ COG: COG1472 Beta-glucosidase-related glycosidases;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569798.1"
+ /db_xref="GI:161502686"
+ /db_xref="InterPro:IPR001764"
+ /db_xref="InterPro:IPR002772"
+ /translation="MKERLNMKWLCSVGVAVSLAIQPALAENLFGNHPLTPEARDAFV
+ TDLLKKMTVDEKIGQLRLISVGPDNPKEAIREMIKDGQVGAIFNTVTRQDIRQMQDQV
+ MALSRLKIPLFFAYDVVHGQRTVFPISLGLASSFNLDAVRTVGRVSAYEAADDGLNMT
+ WAPMVDVSRDPRWGRASEGFGEDTYLTSIMGETMVKAMQGKNPADRYSVMTSVKHFAA
+ YGAVEGGKEYNSVDMSSQRLFNDYMPPYKAGLDAGSGAVMVALNSLNGTPATSDSWLL
+ KEVLRDEWGFKGITVSDHGAIKELIKHGTAADPEDAVRVALKSGVDMSMADEYYSKYL
+ PGLIKSGKVTMAELDDATRHVLNVKYDMGLFNDPYSHLGPKESDPVDTNAESRLHRKE
+ AREVARESLVLLKNRLETLPLKKSGTIAVVGPLADSQRDVMGSWSAAGVADQSVTVLA
+ GIQNAVGDGAKILYAKGANITNNKGIVDFLNLYEEAVKIDPRSPQAMIDEAVQAAKQA
+ DVVVAVVGESQGMAHEASSRTDITIPQSQRDLITALKATGKPLVLVLMNGRPLALVKE
+ DQQADAILETWFAGTEGGNAIADVLFGDYNPSGKLPMSFPRSVGQIPVYYSHLNTGRP
+ YDTEKPNKYTSRYFDEANGPLYPFGYGLSYTTFTVSDVTLSAPTMKRDGNVTASVEVT
+ NTGKREGATVIQMYLQDVTASMSRPVKQLKGFEKITLKPGERKTVSFPIDIEALKFWN
+ QQMKYDAEPGKFNIFIGVDSARVKQGSFELL"
+ misc_feature 747354..749648
+ /locus_tag="SARI_00733"
+ /note="beta-D-glucoside glucohydrolase; Provisional;
+ Region: PRK15098"
+ /db_xref="CDD:185053"
+ misc_feature 747489..748409
+ /locus_tag="SARI_00733"
+ /note="Glycosyl hydrolase family 3 N terminal domain;
+ Region: Glyco_hydro_3; pfam00933"
+ /db_xref="CDD:216204"
+ misc_feature 749409..749615
+ /locus_tag="SARI_00733"
+ /note="Fibronectin type III-like domain; Region: Fn3-like;
+ pfam14310"
+ /db_xref="CDD:222669"
+ gene 749832..750749
+ /locus_tag="SARI_00734"
+ CDS 749832..750749
+ /locus_tag="SARI_00734"
+ /inference="protein motif:HMMPfam:IPR007210"
+ /inference="similar to AA sequence:REFSEQ:YP_217168.1"
+ /note="'KEGG: lwe:lwe1439 5.1e-25 glycine
+ betaine/L-proline ABC transporter, permease/glycine
+ betaine/L-proline-binding protein;
+ COG: COG1732 Periplasmic glycine betaine/choline-binding
+ (lipo)protein of an ABC-type transport system
+ (osmoprotectant binding protein);
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569799.1"
+ /db_xref="GI:161502687"
+ /db_xref="InterPro:IPR007210"
+ /translation="MTISKVWVSSLALLATVSLPLQAASPVTVGSKIDTEGALLGNII
+ LQVLESHGIKTVNKIQLGTTPVVRGAITAGELDIYPEYTGNGAFFFKDENDPAWKNAK
+ QGFEKVKKWDAEQNKLVWLTPAPANNTWTIAVRQDMAEKNKLSSLADLSRYLKEGGTF
+ KLAASAEFIERADALPAFEKAYDFTLNQNQLLSLAGGDTAVTIKAAAQQTSGVNAAMA
+ YGTDGPVAALGLQTLSDPKGVQPIYAPAPVVRESVLQAYPQIADWLQPVFASLDEKTL
+ QQLNARIAVEGLDAKKVATDYLRQKGWVK"
+ misc_feature 749907..750731
+ /locus_tag="SARI_00734"
+ /note="Substrate binding domain of ABC-type glycine
+ betaine transport system; Region: OpuAC; pfam04069"
+ /db_xref="CDD:217871"
+ gene 750753..751919
+ /locus_tag="SARI_00735"
+ CDS 750753..751919
+ /locus_tag="SARI_00735"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="similar to AA sequence:REFSEQ:YP_217167.1"
+ /note="'KEGG: lwe:lwe1439 1.2e-34 glycine
+ betaine/L-proline ABC transporter, permease/glycine
+ betaine/L-proline-binding protein;
+ COG: COG1174 ABC-type proline/glycine betaine transport
+ systems, permease component;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569800.1"
+ /db_xref="GI:161502688"
+ /db_xref="InterPro:IPR000515"
+ /translation="MSDVAKITVNRVLLLLVVLTLLAVALPFINYAPNRLVSGEGRRL
+ WEIWPATIWMLACAGCALFTLCFVPGKRGSVLTLIVAQTLFIVMLWGVGRAATQLAQE
+ GSPLARTSLGSGLWLGLGLTLLACSDAIRRITVGPLWRWLLHAQIVIVPLALLFSGTF
+ DNLSLLKEYTNRQDVFDAALVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTV
+ LNVIQTIPSVALFGLLIAPLAGLVKQFPWLATFGVAGTGMTPALIALVLYALLPLVRG
+ VVAGLNQVPRDVLESARAMGMSSGQRFRHVQLPLALPVFLRSLRVVMVQTVGMAVVAA
+ LIGAGGFGALVFQGLLSSAIDLVLLGVIPVIALALVIDALFDLWIAFLKGATDD"
+ misc_feature 751290..>751700
+ /locus_tag="SARI_00735"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature order(751338..751343,751350..751355,751368..751370,
+ 751395..751406,751410..751439,751449..751454,
+ 751458..751460,751551..751556,751560..751562,
+ 751566..751568,751575..751580,751584..751586,
+ 751596..751601,751608..751610,751659..751661)
+ /locus_tag="SARI_00735"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(751413..751442,751446..751460)
+ /locus_tag="SARI_00735"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(751611..751649,751665..751670,751680..751682)
+ /locus_tag="SARI_00735"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene 751912..752859
+ /locus_tag="SARI_00736"
+ CDS 751912..752859
+ /locus_tag="SARI_00736"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR000644"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:REFSEQ:NP_456723.1"
+ /note="'KEGG: bur:Bcep18194_B0497 1.0e-67 ABC
+ proline/glycine betaine transporter, ATPase subunit
+ K05847;
+ COG: COG1125 ABC-type proline/glycine betaine transport
+ systems, ATPase components;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569801.1"
+ /db_xref="GI:161502689"
+ /db_xref="InterPro:IPR000644"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MIEFNHVSKTFGDHQAVNDLNLRFSEGSFSVLIGTSGSGKSTTL
+ KMINRLVEHDSGTIRFAGEEIRSLPVLELRRRMGYAIQSIGLFPHWTVAQNIATVPQL
+ QKWSRSRINDRIDELMVLLGLESALRDRYPHQLSGGQQQRVGVARALAADPQVLLMDE
+ PFGALDPVTRGALQQEMTRIHRLLGRTIVLVTHDIDEALRLADHLVLMDGGNVIQQGA
+ PLSMLTSPENDFVQAFFGRSELGVRLLSLRSVGDYVRRHERLNGDALVEGMTLRDALS
+ MFVARRCDVLPVANQQGEPCGTLHFRDLLSETSPRETTV"
+ misc_feature 751912..752832
+ /locus_tag="SARI_00736"
+ /note="ABC-type proline/glycine betaine transport systems,
+ ATPase components [Amino acid transport and metabolism];
+ Region: OpuBA; COG1125"
+ /db_xref="CDD:224050"
+ misc_feature 751915..752634
+ /locus_tag="SARI_00736"
+ /note="ATP-binding cassette domain of the osmoprotectant
+ transporter; Region: ABC_OpuCA_Osmoprotection; cd03295"
+ /db_xref="CDD:213262"
+ misc_feature 752011..752034
+ /locus_tag="SARI_00736"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213262"
+ misc_feature order(752020..752025,752029..752037,752155..752157,
+ 752386..752391,752488..752490)
+ /locus_tag="SARI_00736"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213262"
+ misc_feature 752146..752157
+ /locus_tag="SARI_00736"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213262"
+ misc_feature 752314..752343
+ /locus_tag="SARI_00736"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213262"
+ misc_feature 752374..752391
+ /locus_tag="SARI_00736"
+ /note="Walker B; other site"
+ /db_xref="CDD:213262"
+ misc_feature 752398..752409
+ /locus_tag="SARI_00736"
+ /note="D-loop; other site"
+ /db_xref="CDD:213262"
+ misc_feature 752476..752496
+ /locus_tag="SARI_00736"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213262"
+ misc_feature <752710..752832
+ /locus_tag="SARI_00736"
+ /note="CBS domain; Region: CBS; pfam00571"
+ /db_xref="CDD:201313"
+ gene 752843..753574
+ /locus_tag="SARI_00737"
+ CDS 752843..753574
+ /locus_tag="SARI_00737"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="similar to AA sequence:REFSEQ:NP_456722.1"
+ /note="'KEGG: lwe:lwe1439 2.4e-34 glycine
+ betaine/L-proline ABC transporter, permease/glycine
+ betaine/L-proline-binding protein;
+ COG: COG1174 ABC-type proline/glycine betaine transport
+ systems, permease component;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569802.1"
+ /db_xref="GI:161502690"
+ /db_xref="InterPro:IPR000515"
+ /translation="MKRLSDPLLWLIVLFLLLLFGLPYSQPLFGALFPDLPRPVYQQE
+ SFVALALAHFWLVGISSLFAIVVGVGAGIAVTRESGKEFRPLVETIAAVGQTFPPVAV
+ LAIAVPVMGFGQQPAIIALILYGVLPILQATLAGLGAVPASVISIASGMGMSRHQQLY
+ QVELPLAAPVILAGIRTSVIINIGTATIASTVGASTLGTPIIIGLSGFNTAYVIQGAV
+ LVALAAIIIDRLFERLTRALTRHAK"
+ misc_feature <753188..753451
+ /locus_tag="SARI_00737"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature order(753194..753196,753410..753412,753446..753448)
+ /locus_tag="SARI_00737"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(753269..753307,753323..753328,753338..753340)
+ /locus_tag="SARI_00737"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene complement(753722..754453)
+ /locus_tag="SARI_00738"
+ CDS complement(753722..754453)
+ /locus_tag="SARI_00738"
+ /inference="protein motif:HMMPfam:IPR000551"
+ /inference="protein motif:HMMSmart:IPR000551"
+ /inference="protein motif:ScanRegExp:IPR000551"
+ /inference="protein motif:superfamily:IPR009061"
+ /inference="similar to AA sequence:REFSEQ:NP_461105.1"
+ /note="'KEGG: eci:UTI89_C3737 3.0e-07 yhdM;
+ Zn(II)-responsive regulator of ZntA;
+ COG: COG0789 Predicted transcriptional regulators;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569803.1"
+ /db_xref="GI:161502691"
+ /db_xref="InterPro:IPR000551"
+ /db_xref="InterPro:IPR009061"
+ /translation="MALYTIGEVALLCDINPVTLRAWQRRYGLLKPQRTDGGHRLFND
+ ADIDRIREIKRWIDNGVQVSKVKVLLSSDSSDQPNGWREQQEILLHYLQSNNLHSLRL
+ WIKERGQDYPAQTLTTHLFVPLRRRLQYQHPALQALLGILDGILINYIALCLTSARKK
+ QGKDALVVGWNIHDTTRLWLEGWVASQQGWRIDVLAHSLNQLRPELFDGKTLLVWCGE
+ NQTLAQQQQLSAWRAQGRDIHPLGA"
+ misc_feature complement(753728..754453)
+ /locus_tag="SARI_00738"
+ /note="transcriptional regulator MirA; Provisional;
+ Region: PRK15043"
+ /db_xref="CDD:185003"
+ misc_feature complement(754274..754444)
+ /locus_tag="SARI_00738"
+ /note="Helix-Turn-Helix DNA binding domain of MlrA-like
+ transcription regulators; Region: HTH_MlrA-like; cd04763"
+ /db_xref="CDD:133391"
+ misc_feature complement(order(754334..754342,754391..754393,
+ 754433..754441))
+ /locus_tag="SARI_00738"
+ /note="DNA binding residues [nucleotide binding]"
+ /db_xref="CDD:133391"
+ gene 754676..756361
+ /locus_tag="SARI_00739"
+ CDS 754676..756361
+ /locus_tag="SARI_00739"
+ /inference="protein motif:Gene3D:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003018"
+ /inference="protein motif:HMMPfam:IPR003594"
+ /inference="protein motif:HMMPfam:IPR010559"
+ /inference="protein motif:HMMPfam:IPR011620"
+ /inference="protein motif:HMMSmart:IPR003018"
+ /inference="protein motif:HMMSmart:IPR003594"
+ /inference="protein motif:superfamily:IPR003594"
+ /inference="similar to AA sequence:INSD:AAL21063.1"
+ /note="'KEGG: stm:STM2159 1.4e-290 yehU; paral putative
+ sensor/kinase in regulatory system K07704;
+ COG: COG3275 Putative regulator of cell autolysis;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569804.1"
+ /db_xref="GI:161502692"
+ /db_xref="InterPro:IPR003018"
+ /db_xref="InterPro:IPR003594"
+ /db_xref="InterPro:IPR010559"
+ /db_xref="InterPro:IPR011620"
+ /translation="MYEFNLVLLLLQQMCVFLVIAWLMSKTRLFIPLMQVTVRLPHKL
+ LCYVTFSIFCIMGTYFGLHIEDSIANTRAIGAVMGGLLGGPIVGGLVGLTGGLHRYSM
+ GGMTALSCMISTIVEGLLGGLVHSVLIRRGRPDKVFSPLTAGAITFVAELVQMLIILL
+ IARPFDDALHLVSNIAAPMMVTNTVGAALFMRILLDKRAMFEKYTSAFSATALKVAAS
+ TEGILRQGFNEVNSMKVAQVLYQELDIGAVAITDREKLLAFTGIGDDHHLPGRPISSG
+ YTLKAIETGEVVYADGNEVPYRCSLHPQCKLGSTLVIPLRGENQRVMGTIKLYEAKNR
+ LFSSINRTLGEGIAQLLSAQILAGQYERQKALLTQSEIKLLHAQVNPHFLFNALNTIK
+ AVIRRDSEQASQLVQYLSTFFRKNLKRPSEIVTLADEIEHVNAYLQIEKARFQSRLQV
+ QLDVPQTLSCQKLPAFTLQPIVENAIKHGTSQLLDTGNVSIRARREGQHLMLDIEDNA
+ GLYQPSASSSGLGMSLVDKRLREHFGDDYGISVACEPDCFTRITLRLPLEEDA"
+ misc_feature 754682..756358
+ /locus_tag="SARI_00739"
+ /note="Putative regulator of cell autolysis [Signal
+ transduction mechanisms]; Region: LytS; COG3275"
+ /db_xref="CDD:225814"
+ misc_feature 754754..755263
+ /locus_tag="SARI_00739"
+ /note="5TMR of 5TMR-LYT; Region: 5TM-5TMR_LYT; pfam07694"
+ /db_xref="CDD:219520"
+ misc_feature 755375..755740
+ /locus_tag="SARI_00739"
+ /note="GAF domain; Region: GAF; pfam01590"
+ /db_xref="CDD:216590"
+ misc_feature 755786..756031
+ /locus_tag="SARI_00739"
+ /note="Histidine kinase; Region: His_kinase; pfam06580"
+ /db_xref="CDD:203479"
+ misc_feature 756077..756340
+ /locus_tag="SARI_00739"
+ /note="Histidine kinase-like ATPases; This family includes
+ several ATP-binding proteins for example: histidine
+ kinase, DNA gyrase B, topoisomerases, heat shock protein
+ HSP90, phytochrome-like ATPases and DNA mismatch repair
+ proteins; Region: HATPase_c; cd00075"
+ /db_xref="CDD:238030"
+ misc_feature order(756083..756085,756095..756097,756104..756106,
+ 756185..756187,756191..756193,756230..756241,
+ 756296..756298,756302..756304,756317..756322,
+ 756326..756328)
+ /locus_tag="SARI_00739"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature 756095..756097
+ /locus_tag="SARI_00739"
+ /note="Mg2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature order(756230..756232,756236..756238)
+ /locus_tag="SARI_00739"
+ /note="G-X-G motif; other site"
+ /db_xref="CDD:238030"
+ gene 756358..757077
+ /locus_tag="SARI_00740"
+ CDS 756358..757077
+ /locus_tag="SARI_00740"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:HMMPfam:IPR001789"
+ /inference="protein motif:HMMPfam:IPR007492"
+ /inference="protein motif:HMMPIR:IPR008246"
+ /inference="protein motif:HMMSmart:IPR001789"
+ /inference="protein motif:superfamily:IPR011006"
+ /inference="similar to AA sequence:INSD:AAV76691.1"
+ /note="unknown function; when overproduced it confers
+ drug-resistance"
+ /codon_start=1
+ /transl_table=11
+ /product="putative two-component response-regulatory
+ protein YehT"
+ /protein_id="YP_001569805.1"
+ /db_xref="GI:161502693"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR007492"
+ /db_xref="InterPro:IPR008246"
+ /db_xref="InterPro:IPR011006"
+ /translation="MIKVLIVDDEPLARENLRILLQGQDDIEIVGECANAVEAIGAVH
+ KLRPDVLFLDIQMPRISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKP
+ IEEKRLEKTLHRLRQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMDDVAFVSSRM
+ SGVYVTSSKGKEGFTELTLRTLESRTPLLRCHRQFLVNMAHLQEIRLEDNGQAELVLR
+ NGLTVPVSRRYLKSLKEAIGL"
+ misc_feature 756358..757074
+ /locus_tag="SARI_00740"
+ /note="putative two-component response-regulatory protein
+ YehT; Provisional; Region: PRK11697"
+ /db_xref="CDD:236956"
+ misc_feature 756370..756702
+ /locus_tag="SARI_00740"
+ /note="Signal receiver domain; originally thought to be
+ unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
+ recently identified in eukaroytes ETR1 Arabidopsis
+ thaliana; this domain receives the signal from the sensor
+ partner in a two-component systems; Region: REC; cd00156"
+ /db_xref="CDD:238088"
+ misc_feature order(756379..756384,756517..756519,756541..756543,
+ 756598..756600,756649..756651,756658..756663)
+ /locus_tag="SARI_00740"
+ /note="active site"
+ /db_xref="CDD:238088"
+ misc_feature 756517..756519
+ /locus_tag="SARI_00740"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238088"
+ misc_feature order(756526..756531,756535..756543)
+ /locus_tag="SARI_00740"
+ /note="intermolecular recognition site; other site"
+ /db_xref="CDD:238088"
+ misc_feature 756658..756666
+ /locus_tag="SARI_00740"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238088"
+ misc_feature 756784..757071
+ /locus_tag="SARI_00740"
+ /note="LytTr DNA-binding domain; Region: LytTR; pfam04397"
+ /db_xref="CDD:218063"
+ gene 757067..757594
+ /locus_tag="SARI_00741"
+ CDS 757067..757594
+ /locus_tag="SARI_00741"
+ /inference="protein motif:HMMPfam:IPR009921"
+ /inference="similar to AA sequence:REFSEQ:YP_217160.1"
+ /note="'COG: COG4807 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569806.1"
+ /db_xref="GI:161502694"
+ /db_xref="InterPro:IPR009921"
+ /translation="MACKRLLEYRFAIETTEGLMLSNDILRSVRYILKANNTDLARIL
+ ALGNVDATPEQIAVWLRKEEEEGFQRCPDIVLSSFLNGLIYEKRGKDDSAPALTPERR
+ INNNIVLKKLRIAFSLKTDDILAILTGQQFRVSMPEITAMMRAPDHKNFRECGDQFLR
+ YFLRGLAAREHAAKA"
+ misc_feature 757124..757588
+ /locus_tag="SARI_00741"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG4807"
+ /db_xref="CDD:227144"
+ misc_feature 757133..757333
+ /locus_tag="SARI_00741"
+ /note="Protein of unknown function (DUF1456); Region:
+ DUF1456; pfam07308"
+ /db_xref="CDD:203609"
+ misc_feature 757379..757564
+ /locus_tag="SARI_00741"
+ /note="Protein of unknown function (DUF1456); Region:
+ DUF1456; pfam07308"
+ /db_xref="CDD:203609"
+ gene 757627..757854
+ /locus_tag="SARI_00742"
+ CDS 757627..757854
+ /locus_tag="SARI_00742"
+ /note="'Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569807.1"
+ /db_xref="GI:161502695"
+ /translation="MPDGDASLLPGLQIMLRNVGLISAAPSGNANTMYVVGTPGDYFA
+ SLKPAASSSVRVCFMLIPLLVLPDTTFLVTP"
+ gene complement(758005..760095)
+ /gene="metG"
+ /locus_tag="SARI_00743"
+ CDS complement(758005..760095)
+ /gene="metG"
+ /locus_tag="SARI_00743"
+ /inference="protein motif:Gene3D:IPR012340"
+ /inference="protein motif:HMMPfam:IPR002300"
+ /inference="protein motif:HMMPfam:IPR002308"
+ /inference="protein motif:HMMPfam:IPR002547"
+ /inference="protein motif:HMMPIR:IPR008224"
+ /inference="protein motif:HMMTigr:IPR002304"
+ /inference="protein motif:HMMTigr:IPR004495"
+ /inference="protein motif:ScanRegExp:IPR001412"
+ /inference="protein motif:superfamily:IPR008994"
+ /inference="protein motif:superfamily:IPR009080"
+ /note="methionine--tRNA ligase; MetRS; adds methionine to
+ tRNA(Met) with cleavage of ATP to AMP and diphosphate;
+ some MetRS enzymes form dimers depending on a C-terminal
+ domain that is also found in other proteins such as
+ Trbp111 in Aquifex aeolicus and the cold-shock protein
+ CsaA from Bacillus subtilis while others do not; four
+ subfamilies exist based on sequence motifs and zinc
+ content"
+ /codon_start=1
+ /transl_table=11
+ /product="methionyl-tRNA synthetase"
+ /protein_id="YP_001569808.1"
+ /db_xref="GI:161502696"
+ /db_xref="InterPro:IPR001412"
+ /db_xref="InterPro:IPR002300"
+ /db_xref="InterPro:IPR002304"
+ /db_xref="InterPro:IPR002308"
+ /db_xref="InterPro:IPR002547"
+ /db_xref="InterPro:IPR004495"
+ /db_xref="InterPro:IPR008224"
+ /db_xref="InterPro:IPR008994"
+ /db_xref="InterPro:IPR009080"
+ /db_xref="InterPro:IPR012340"
+ /translation="MPLLVLSKPFFTTEEVIPTMTQVAKKILVTCALPYANGSIHLGH
+ MLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLGITPEQMIGEMRHEHQT
+ DFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTISQLYDPEKGMFLPDRF
+ VKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFS
+ EMLQAWTRSGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDA
+ PIGYMGSFKNLCDKRGDTTSFEEYWKKDSDAELYHFIGKDIVYFHSLFWPAMLEGSNF
+ RKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTAKLSSRIDDIDL
+ NLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLAAELADPQLYKTFTDAAAAIGE
+ AWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRVLM
+ TYLKPVLPTLSERVEAFLNCELSWEGIQQPLLGHKINAFKALYNRIDMKQVEALVDAS
+ KEEVKAAAAPVTGPLADSPIQETITFDDFAKVDLRVALIENAGFVEGSDKLLRLTLDL
+ GGEKRNVFSGIRSAYPDPRALIGRQTVMVANLAPRKMRFGVSEGMVMAAGPGGKDIFL
+ LSPDDGAKPGQQVK"
+ misc_feature complement(758008..760023)
+ /gene="metG"
+ /locus_tag="SARI_00743"
+ /note="methionyl-tRNA synthetase; Reviewed; Region: metG;
+ PRK00133"
+ /db_xref="CDD:234655"
+ misc_feature complement(758923..760020)
+ /gene="metG"
+ /locus_tag="SARI_00743"
+ /note="catalytic core domain of methioninyl-tRNA
+ synthetases; Region: MetRS_core; cd00814"
+ /db_xref="CDD:173907"
+ misc_feature complement(order(759133..759135,759145..759147,
+ 759256..759258,759265..759270,759277..759279,
+ 759880..759882,759991..759993,759997..760002))
+ /gene="metG"
+ /locus_tag="SARI_00743"
+ /note="active site"
+ /db_xref="CDD:173907"
+ misc_feature complement(759964..759975)
+ /gene="metG"
+ /locus_tag="SARI_00743"
+ /note="HIGH motif; other site"
+ /db_xref="CDD:173907"
+ misc_feature complement(759028..759042)
+ /gene="metG"
+ /locus_tag="SARI_00743"
+ /note="KMSKS motif; other site"
+ /db_xref="CDD:173907"
+ misc_feature complement(758518..758916)
+ /gene="metG"
+ /locus_tag="SARI_00743"
+ /note="Anticodon-binding domain of methionyl tRNA
+ synthetases; Region: Anticodon_Ia_Met; cd07957"
+ /db_xref="CDD:153411"
+ misc_feature complement(order(758653..758655,758668..758673,
+ 758677..758682,758839..758844,758851..758856,
+ 758863..758868,758875..758880,758887..758892,
+ 758911..758913))
+ /gene="metG"
+ /locus_tag="SARI_00743"
+ /note="tRNA binding surface [nucleotide binding]; other
+ site"
+ /db_xref="CDD:153411"
+ misc_feature complement(order(758653..758655,758671..758673,
+ 758839..758844,758851..758856,758863..758868,
+ 758875..758880,758890..758892))
+ /gene="metG"
+ /locus_tag="SARI_00743"
+ /note="anticodon binding site; other site"
+ /db_xref="CDD:153411"
+ misc_feature complement(758008..758328)
+ /gene="metG"
+ /locus_tag="SARI_00743"
+ /note="tRNA-binding-domain-containing Escherichia coli
+ methionyl-tRNA synthetase (EcMetRS)-like proteins. This
+ family includes EcMetRS and Aquifex aeolicus Trbp111
+ (AaTrbp111). This domain has general tRNA binding
+ properties. MetRS aminoacylates methionine...; Region:
+ tRNA_bind_EcMetRS_like; cd02800"
+ /db_xref="CDD:239199"
+ misc_feature complement(order(758008..758019,758029..758031,
+ 758038..758040,758044..758046,758050..758052,
+ 758071..758082,758116..758118,758125..758133,
+ 758182..758184,758323..758325))
+ /gene="metG"
+ /locus_tag="SARI_00743"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:239199"
+ misc_feature complement(order(758089..758091,758098..758100,
+ 758119..758121,758131..758133,758212..758214,
+ 758248..758250))
+ /gene="metG"
+ /locus_tag="SARI_00743"
+ /note="putative tRNA-binding site [nucleotide binding];
+ other site"
+ /db_xref="CDD:239199"
+ gene 760177..761286
+ /locus_tag="SARI_00744"
+ CDS 760177..761286
+ /locus_tag="SARI_00744"
+ /inference="protein motif:ScanRegExp:IPR000808"
+ /inference="similar to AA sequence:INSD:AAX66075.1"
+ /note="'KEGG: eci:UTI89_C2387 1.1e-191 mrp; putative
+ ATPase K03593;
+ COG: COG0489 ATPases involved in chromosome partitioning;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative ATPase"
+ /protein_id="YP_001569809.1"
+ /db_xref="GI:161502697"
+ /db_xref="InterPro:IPR000808"
+ /translation="MNEQSQAKSPDTLRAMVAGTLANFQHPTLKHNLTTLKALHHVAW
+ MDDTLHVELVMPFVWNSAFEVLKEQCSADLLRITGAKAIDWKLSYNIATLKRVKNQPG
+ INGVKNIIAVSSGKGGVGKSSTAVNLALALAAEGAKVGVLDADIYGPSIPTMLGAEDQ
+ RPTSPDGTHMAPIMSHGLATNSIGYLVTDDNAMVWRGPMASKALMQMLQETLWPDLDY
+ LVLDMPPGTGDIQLTLAQNIPVTGAVVVTTPQDIALIDAKKGIVMFEKVEVPVLGIVE
+ NMSMHICSNCGHHEPIFGTGGAQKLAEKYHTQLLGQMPLHISLREDLDRGTPTVVSRP
+ ESEFTAIYRELADRVAAQLYWQGEVIPGEIAFRAV"
+ misc_feature 760177..761283
+ /locus_tag="SARI_00744"
+ /note="antiporter inner membrane protein; Provisional;
+ Region: PRK11670"
+ /db_xref="CDD:183270"
+ misc_feature 760501..761124
+ /locus_tag="SARI_00744"
+ /note="MRP (Multiple Resistance and pH adaptation) is a
+ homologue of the Fer4_NifH superfamily. Like the other
+ members of the superfamily, MRP contains a ATP-binding
+ domain at the N-termini. It is found in bacteria as a
+ membrane-spanning protein and functions...; Region:
+ MRP-like; cd02037"
+ /db_xref="CDD:238994"
+ misc_feature 760519..760542
+ /locus_tag="SARI_00744"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:238994"
+ gene 761477..761845
+ /locus_tag="SARI_00745"
+ CDS 761477..761845
+ /locus_tag="SARI_00745"
+ /inference="similar to AA sequence:REFSEQ:NP_456712.1"
+ /note="'COG: NOG18135 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569810.1"
+ /db_xref="GI:161502698"
+ /translation="MVLKYRYVHTAHQDGLHTVWRSTEEQLFTMKKYLLMGIIVSAYG
+ ISVLVFASDTATLTISGKVTAPTCSTEVVNAQLQQRCGNTIHVSTLQTPAATPMRGVT
+ TQLYTVPGDSTRQIVVNRYD"
+ misc_feature 761564..761842
+ /locus_tag="SARI_00745"
+ /note="Protein of unknown function (DUF2574); Region:
+ DUF2574; pfam10836"
+ /db_xref="CDD:151285"
+ gene 762124..762657
+ /locus_tag="SARI_00746"
+ CDS 762124..762657
+ /locus_tag="SARI_00746"
+ /inference="protein motif:Gene3D:IPR000259"
+ /inference="protein motif:HMMPfam:IPR000259"
+ /inference="protein motif:ScanRegExp:IPR000276"
+ /inference="protein motif:superfamily:IPR008966"
+ /inference="similar to AA sequence:REFSEQ:YP_150010.1"
+ /note="'COG: COG3539 P pilus assembly protein, pilin FimA;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569811.1"
+ /db_xref="GI:161502699"
+ /db_xref="InterPro:IPR000259"
+ /db_xref="InterPro:IPR000276"
+ /db_xref="InterPro:IPR008966"
+ /translation="MKRSLIAASVLSAVFMSAGAFAADEDMGELKINGKVVGTSCTFE
+ GANSATIELSQVGVDRFADLNPGDIYTGYTSPEAILKVKCSNTANPRISFNRSQFVDN
+ MQITKNNATNNGAGFAVYLDGTQVKPDEAGNYTLNSSKFENGVYTLNFSARYAAVENT
+ VTPGSVESVLTMTVLTD"
+ misc_feature 762124..762654
+ /locus_tag="SARI_00746"
+ /note="fimbrial chaperone protein; Provisional; Region:
+ PRK15220"
+ /db_xref="CDD:237928"
+ gene 762758..763399
+ /locus_tag="SARI_00747"
+ CDS 762758..763399
+ /locus_tag="SARI_00747"
+ /inference="protein motif:BlastProDom:IPR001829"
+ /inference="protein motif:Gene3D:IPR001829"
+ /inference="protein motif:HMMPfam:IPR001829"
+ /inference="protein motif:ScanRegExp:IPR001829"
+ /inference="protein motif:superfamily:IPR008962"
+ /inference="similar to AA sequence:REFSEQ:YP_150011.1"
+ /note="'COG: COG3121 P pilus assembly protein, chaperone
+ PapD;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569812.1"
+ /db_xref="GI:161502700"
+ /db_xref="InterPro:IPR001829"
+ /db_xref="InterPro:IPR008962"
+ /translation="MPAWSGVYIYGTRIIYPAQKKDITVQLMNDGKRSSLIQAWIDNG
+ DTSLPPEKLQVPFIMTPPVIRVAANSGQQLKIKKLANNLPGDRESLFYLNVLDIPPNS
+ DENKDKNIIKFALQNRIKLIYRPPGVQKVDKATFSRLQLLRAPGSISVKNNSANWITI
+ PEIKAKSKVNKETLLLAPWSSQSITTTAVVNSYTVTLIDDSGNYLNETIKIEN"
+ misc_feature 762758..763396
+ /locus_tag="SARI_00747"
+ /note="fimbrial chaperone protein PegB; Provisional;
+ Region: PRK15218"
+ /db_xref="CDD:185140"
+ misc_feature 762773..763144
+ /locus_tag="SARI_00747"
+ /note="Gram-negative pili assembly chaperone, N-terminal
+ domain; Region: Pili_assembly_N; pfam00345"
+ /db_xref="CDD:215870"
+ misc_feature 763199..763369
+ /locus_tag="SARI_00747"
+ /note="Gram-negative pili assembly chaperone, C-terminal
+ domain; Region: Pili_assembly_C; pfam02753"
+ /db_xref="CDD:217216"
+ gene 763428..765914
+ /locus_tag="SARI_00748"
+ CDS 763428..765914
+ /locus_tag="SARI_00748"
+ /inference="protein motif:HMMPfam:IPR000015"
+ /note="'COG: COG3188 P pilus assembly protein, porin PapC;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569813.1"
+ /db_xref="GI:161502701"
+ /db_xref="InterPro:IPR000015"
+ /translation="MEKLNAITLSLFAALLISPAWAEEETFDTNFMFGGLKGEKVSRY
+ QIDSTKPMAGVYEMDVYVNKEWRGTYEVNIQDDPDSTCISPDLIASLGIKFTPQSTTV
+ ENECIALKTVVHGGSVSYDTAAFNLYLSVPQAYVLEYEAGYASPEAWDRGINAFYTSY
+ YASEYYSHYKSGGSEKNTYANFVSGLNLLGWQLHSNANFSKSENSAGKWQSNTLYLER
+ DFPAVLGTMRLGEQYTSGDMFDTVRFRGVRFWRDMQMLPHSKQNFAPVVRGVAQSNAL
+ VTVEQNGFIVYQKEVPTGPFVFEDLQLAGGGADLDVSVKEADGTVSRFIVPYSSVPNM
+ VQPGVAKYDFAAGRSRIEGASQQTDFLQGTYQYGVNNLLTLYSGTMLASDYRSFTLGT
+ GWNTLIGAVSVDGTLSHSKQDNGDVFDGESYQVAWNKYLPQSATHFSLAAYRYSSRDY
+ RTFNDHVWANNRDNYRRDDDDIYDIADYYENDFGRKNTFTLNINQTLPDGWGYFTASA
+ LWRDYWGRSGTGKDYQLSYSNTWQRLSFTLSATQTYDSDNREDKRFNIYLSIPLTWGV
+ KENGGNRDIHLSNSTTFDEQGYVANNTSLSGTFGNRDQFNYTTNLSQQRQEHQTKFGG
+ SVTWNAPLATVGGSYSQSNKYHQVGGNIQGGLVAWADGVHLASRLNDTIAIINAPYLE
+ GAAVQGRPYLRTNAKGYAVFEALTPYRQNFISLDVSESESDVALLGNRKVTVPYRGAV
+ VLVDFETETSKPFYFLARRADGEPLTFGYEVEDDEGNNVGLVGQGSRVFIRTEKVPVS
+ VKVATDKQQGLFCKITFDKQIDENNVYICR"
+ misc_feature 763428..765911
+ /locus_tag="SARI_00748"
+ /note="fimbrial outer membrane usher protein; Provisional;
+ Region: PRK15217"
+ /db_xref="CDD:185139"
+ misc_feature 763503..763916
+ /locus_tag="SARI_00748"
+ /note="PapC N-terminal domain; Region: PapC_N; pfam13954"
+ /db_xref="CDD:222472"
+ misc_feature 763962..765662
+ /locus_tag="SARI_00748"
+ /note="Type VII secretion system (T7SS), usher protein;
+ Region: Usher; pfam00577"
+ /db_xref="CDD:216001"
+ misc_feature 765696..765893
+ /locus_tag="SARI_00748"
+ /note="PapC C-terminal domain; Region: PapC_C; pfam13953"
+ /db_xref="CDD:222471"
+ gene 765930..766952
+ /locus_tag="SARI_00749"
+ CDS 765930..766952
+ /locus_tag="SARI_00749"
+ /inference="protein motif:Gene3D:IPR000259"
+ /inference="protein motif:HMMPfam:IPR000259"
+ /inference="protein motif:superfamily:IPR008966"
+ /inference="similar to AA sequence:REFSEQ:YP_150013.1"
+ /note="'COG: NOG07909 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569814.1"
+ /db_xref="GI:161502702"
+ /db_xref="InterPro:IPR000259"
+ /db_xref="InterPro:IPR008966"
+ /translation="MKRLLFLLMMMQFTQLGYAACNATLTNTKDYTIQSDSLMLGGEE
+ SAIITNGFTDANCSNSDVVTKLETSDHIIGMGPNDSVKLKLKVEWQSSSAINMRNQNG
+ VIEAPYKITISEINSLEAVTVSARGGYSVTIDNIAVMSGAKNQWSSSDWIIFILRYIG
+ CWGNRECVANAITDLNGKGVYKANVTINYNRKETTCAPQNLTITLDPVPMTKLRAKGE
+ VSEFYKQGDIILDCENQVRNATLTSRQIAVNLRSDLVWDENDAVLKPDNDNGVGFILR
+ DSNRSLLKINKGATINSIFKTYAKGSAVNSVEAIPVFATYYVLDPAKVKAGPLQSKAL
+ IVVSYN"
+ misc_feature 765930..766949
+ /locus_tag="SARI_00749"
+ /note="putative fimbrial biosynthesis regulatory protein;
+ Provisional; Region: PRK15216"
+ /db_xref="CDD:185138"
+ misc_feature 765981..766949
+ /locus_tag="SARI_00749"
+ /note="putative fimbrial-like adhesin protein StcD;
+ Provisional; Region: PRK15252"
+ /db_xref="CDD:237932"
+ gene complement(766996..767310)
+ /locus_tag="SARI_00750"
+ CDS complement(766996..767310)
+ /locus_tag="SARI_00750"
+ /inference="similar to AA sequence:INSD:AAL21051.1"
+ /note="'COG: COG5455 Predicted integral membrane protein;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569815.1"
+ /db_xref="GI:161502703"
+ /translation="MKSKLLPCALLLATSFAWAAPATTGIDQYELKSFIADFTHFKPG
+ DTVPQMYRTDEYNIKQWKLRNLPAPDAGTHWTYMGGAYVLINDTDGKIIKAYDGEIFY
+ HR"
+ misc_feature complement(767011..>767310)
+ /locus_tag="SARI_00750"
+ /note="Predicted integral membrane protein [Function
+ unknown]; Region: COG5455"
+ /db_xref="CDD:227742"
+ gene 767436..767621
+ /locus_tag="SARI_00751"
+ CDS 767436..767621
+ /locus_tag="SARI_00751"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569816.1"
+ /db_xref="GI:161502704"
+ /translation="MQQHIRQQVCQNRIGFENYLITLKLSSAAGCKFTLSGADSMLNS
+ ETPLNTAGLDDSGCPSL"
+ misc_feature 767592..767688
+ /inference="nucleotide motif:Rfam:RF00059"
+ /note="TPP riboswitch (THI element)"
+ gene 767720..768517
+ /locus_tag="SARI_00752"
+ CDS 767720..768517
+ /locus_tag="SARI_00752"
+ /inference="protein motif:HMMPfam:IPR000417"
+ /inference="protein motif:HMMPIR:IPR011144"
+ /inference="protein motif:HMMTigr:IPR000417"
+ /inference="similar to AA sequence:SwissProt:P55883"
+ /note="catalyzes the formation of
+ 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from
+ 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP"
+ /codon_start=1
+ /transl_table=11
+ /product="hydroxyethylthiazole kinase"
+ /protein_id="YP_001569817.2"
+ /db_xref="GI:448236204"
+ /db_xref="InterPro:IPR000417"
+ /db_xref="InterPro:IPR011144"
+ /translation="MQPDLHCRTLAAHTLKHFRALSPLTHCMTNDVVQTFTANTLLAL
+ GASPAMVIDPAEARPFAAIANALLVNVGTLTASRADAMRAAVESAYDAKTPWTLDPVA
+ VGALEFRRRFCLDLLSLRPAAIRGNASEILALAGMALGGRGVDTTEAALAALPAAQAL
+ ARQIDCIVVVTGEIDYVTNGQRTLSIPGGDPLMTRIVGTGCALSAVVAASCALPGAAL
+ DNVASACCWMKLAGQAAAERSEGPGSFIPAFLDALYHLDVEAANATN"
+ misc_feature 767783..768481
+ /locus_tag="SARI_00752"
+ /note="4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase
+ catalyzes the phosphorylation of the hydroxylgroup of Thz.
+ A reaction that allows cells to recycle Thz into the
+ thiamine biosynthesis pathway, as an alternative to its
+ synthesis from cysteine, tyrosine...; Region: THZ_kinase;
+ cd01170"
+ /db_xref="CDD:238575"
+ misc_feature order(767807..767809,767813..767815,767831..767833,
+ 767843..767845,767861..767863,767867..767869,
+ 767927..767929,767933..767938)
+ /locus_tag="SARI_00752"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:238575"
+ misc_feature order(767810..767827,767831..767836,767843..767845,
+ 767867..767878,767882..767887,767894..767899,
+ 767933..767944,768041..768046,768299..768310,
+ 768446..768451,768455..768463,768467..768472,
+ 768479..768481)
+ /locus_tag="SARI_00752"
+ /note="multimerization interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:238575"
+ misc_feature order(768014..768016,768092..768094,768098..768100,
+ 768107..768109,768230..768232,768236..768238,
+ 768242..768244,768296..768298,768314..768316,
+ 768320..768322)
+ /locus_tag="SARI_00752"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238575"
+ gene 768504..769304
+ /locus_tag="SARI_00753"
+ CDS 768504..769304
+ /locus_tag="SARI_00753"
+ /inference="protein motif:HMMPfam:IPR013749"
+ /inference="protein motif:HMMTigr:IPR004399"
+ /inference="similar to AA sequence:SwissProt:P55882"
+ /note="catalyzes the formation of
+ 4-amino-2-methyl-5-diphosphomethylpyrimidine"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphomethylpyrimidine kinase"
+ /protein_id="YP_001569818.1"
+ /db_xref="GI:161502706"
+ /db_xref="InterPro:IPR004399"
+ /db_xref="InterPro:IPR013749"
+ /translation="MQRINALTIAGTDPSGGAGIQADLKTFSALGAYGCSVITALVAQ
+ NTCGVQSVYRIEPDFVAAQLDAVFSDVRIDTTKIGMLAETDIVEAVAERLQRHHVRNV
+ VLDTVMLAKSGDPLLSPSAVETLRVRLLPQVSLITPNLPEAAALLNAAHARTEQEMLA
+ QGRALLAMGCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAPRVITKNTHGTGCTLSAA
+ LAALRPRHRSWGETVNEAKTWLSAALAQADTLEVGKGIGPVHHFHAWW"
+ misc_feature 768516..769244
+ /locus_tag="SARI_00753"
+ /note="4-amino-5-hydroxymethyl-2-methyl-pyrimidine
+ phosphate kinase (HMPP-kinase) catalyzes two consecutive
+ phosphorylation steps in the thiamine phosphate
+ biosynthesis pathway, leading to the synthesis of vitamin
+ B1. The first step is the phosphorylation of...; Region:
+ HMPP_kinase; cd01169"
+ /db_xref="CDD:238574"
+ misc_feature order(768516..768518,768537..768539,768543..768548,
+ 768552..768554,768564..768566,768573..768578,
+ 768585..768587,768594..768611,768615..768617,
+ 768624..768638,768651..768656,768660..768662,
+ 768666..768671,768678..768680,768687..768689,
+ 768699..768704)
+ /locus_tag="SARI_00753"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238574"
+ misc_feature order(768534..768536,768570..768572,768633..768635,
+ 768741..768743,769140..769142)
+ /locus_tag="SARI_00753"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:238574"
+ misc_feature order(768816..768818,768927..768929,769029..769031,
+ 769131..769133,769137..769139)
+ /locus_tag="SARI_00753"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238574"
+ gene 769341..770087
+ /locus_tag="SARI_00754"
+ CDS 769341..770087
+ /locus_tag="SARI_00754"
+ /inference="protein motif:Gene3D:IPR000524"
+ /inference="protein motif:HMMPfam:IPR000524"
+ /inference="protein motif:HMMPfam:IPR011663"
+ /inference="protein motif:HMMSmart:IPR000524"
+ /inference="similar to AA sequence:REFSEQ:YP_150017.1"
+ /note="'KEGG: reh:H16_B1289 3.0e-12 phnF; regulator of
+ phosphonate operon, GntR-family;
+ COG: COG2188 Transcriptional regulators;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569819.1"
+ /db_xref="GI:161502707"
+ /db_xref="InterPro:IPR000524"
+ /db_xref="InterPro:IPR011663"
+ /translation="MEQAHTQLIAQLNERISAADNTPLYMKFAQTVKDAVRSGILEHG
+ NILPGERDLSQLTGVSRITVRKAMQALEEEGVVTRARGYGTQINNIFEYSLKEARGFS
+ RQVVLRGKKPDTLWVNKRVVSCPDEVAQHLAISAGSDVFLLKRIRYVDEDAVSIEESW
+ APAHLIHDVDAIGISLYDYFRSRHIYPQRTRSRVSARMPDDEFQSHIQMDGKVPVLVI
+ KQVALDQQHRPIEYRISYCRSDLYVFVCEE"
+ misc_feature 769395..770081
+ /locus_tag="SARI_00754"
+ /note="Transcriptional regulators [Transcription]; Region:
+ PhnF; COG2188"
+ /db_xref="CDD:225099"
+ misc_feature 769407..769604
+ /locus_tag="SARI_00754"
+ /note="Winged helix-turn-helix (WHTH) DNA-binding domain
+ of the GntR family of transcriptional regulators; Region:
+ WHTH_GntR; cd07377"
+ /db_xref="CDD:153418"
+ misc_feature order(769407..769409,769413..769415,769482..769484,
+ 769488..769493,769515..769529,769533..769538,
+ 769545..769547,769575..769580,769584..769595)
+ /locus_tag="SARI_00754"
+ /note="DNA-binding site [nucleotide binding]; DNA binding
+ site"
+ /db_xref="CDD:153418"
+ misc_feature 769662..770066
+ /locus_tag="SARI_00754"
+ /note="UTRA domain; Region: UTRA; pfam07702"
+ /db_xref="CDD:219527"
+ gene complement(770292..770599)
+ /locus_tag="SARI_00755"
+ /note="Pseudogene compared to gi|16765471|ref|NP_461086.1|
+ putative transport protein [Salmonella typhimurium LT2]"
+ gene 770853..771905
+ /locus_tag="SARI_00756"
+ CDS 770853..771905
+ /locus_tag="SARI_00756"
+ /inference="protein motif:HMMPfam:IPR002915"
+ /inference="similar to AA sequence:REFSEQ:NP_804562.1"
+ /note="'catalyzes the formation of glycerone phosphate and
+ D-glyceraldehyde 3-phosphate from D-fructose
+ 1,6-bisphosphate'"
+ /codon_start=1
+ /transl_table=11
+ /product="fructose-bisphosphate aldolase"
+ /protein_id="YP_001569820.1"
+ /db_xref="GI:161502708"
+ /db_xref="InterPro:IPR002915"
+ /translation="MTDIAQLLGKDADSLLQHRCMTIPSDQLYLPGKDYVDRVMIDNN
+ RPPAVLRNMQTLYNTGRLSGTGYLSILPVDQGVEHSAGASFAANPRYFDPKNIVELAI
+ EAGCNCVASTYGVLASVSRRYAHRIPFLVKLNHNETLSYPTEYDQTLYASVEQAFNMG
+ AVAVGATIYFGSEQSRRQIEEISAAFERAHELGMVTVLWAYLRNSSFKKDGVDYHVSA
+ DLTGQANHLAATIGADIVKQKMAENNGGYKAVNFGYTDDRVYSKLTSDNPIDLVRYQL
+ ANCYMGRAGLINSGGADGGDTDLGDAVRTAVINKRAGGMGLILGRKAFKKSMVDGVRL
+ INAVQDVYLDSNVTIA"
+ misc_feature 770853..771902
+ /locus_tag="SARI_00756"
+ /note="fructose-bisphosphate aldolase; Provisional;
+ Region: PRK09250"
+ /db_xref="CDD:236431"
+ misc_feature 771054..771881
+ /locus_tag="SARI_00756"
+ /note="Class I fructose-1,6-bisphosphate (FBP) aldolases
+ of the archaeal type (DhnA homologs); Region: DhnA;
+ cd00958"
+ /db_xref="CDD:188645"
+ misc_feature order(771609..771611,771618..771620,771774..771782,
+ 771846..771854)
+ /locus_tag="SARI_00756"
+ /note="putative active site; other site"
+ /db_xref="CDD:188645"
+ misc_feature 771609..771611
+ /locus_tag="SARI_00756"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:188645"
+ gene complement(771959..772858)
+ /locus_tag="SARI_00757"
+ CDS complement(771959..772858)
+ /locus_tag="SARI_00757"
+ /inference="protein motif:BlastProDom:IPR001206"
+ /inference="protein motif:HMMPfam:IPR001206"
+ /inference="protein motif:HMMSmart:IPR001206"
+ /inference="protein motif:HMMTigr:IPR005218"
+ /inference="similar to AA sequence:INSD:AAV76710.1"
+ /note="cytosolic protein with phosphatidylglycerol kinase
+ activity; undetermined physiological role"
+ /codon_start=1
+ /transl_table=11
+ /product="lipid kinase"
+ /protein_id="YP_001569821.1"
+ /db_xref="GI:161502709"
+ /db_xref="InterPro:IPR001206"
+ /db_xref="InterPro:IPR005218"
+ /translation="MANFPDSLLILNGKSADNQPLREAITLLRDEGIQIHVRVTWEKG
+ DAQRYVDEARRLGVETVIAGGGDGTINEVSTALIQIRDGVVPALGLLPLGTANDFATS
+ AGIPEALDKALKLAIAGNAMEIDMARVNDKTSFINMATGGFGTRITTETPEKLKAALG
+ GVSYLIHGLMRMDTLKPDRCEIRGENFHWQGNALVIGIGNGRQAGGGQQLCPTALIND
+ GLLQLRIFTGEELLPALFSTLTQSDDNQNIIDGASAWFDIHAPHEITFNLDGEPLSGQ
+ EFHIEVLPGALRCRLPPDCPLLR"
+ misc_feature complement(772001..772855)
+ /locus_tag="SARI_00757"
+ /note="lipid kinase; Reviewed; Region: PRK13054"
+ /db_xref="CDD:237281"
+ misc_feature complement(772469..772837)
+ /locus_tag="SARI_00757"
+ /note="Diacylglycerol kinase catalytic domain; Region:
+ DAGK_cat; pfam00781"
+ /db_xref="CDD:216116"
+ gene 774042..774458
+ /locus_tag="SARI_00758"
+ CDS 774042..774458
+ /locus_tag="SARI_00758"
+ /inference="protein motif:HMMPfam:IPR010261"
+ /inference="similar to AA sequence:REFSEQ:YP_217139.1"
+ /note="'COG: NOG24672 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569822.1"
+ /db_xref="GI:161502710"
+ /db_xref="InterPro:IPR010261"
+ /translation="MYSRADSLLKKFSIKLNLDSIAFDENRLCSFLIDKRYHILMSST
+ NGEYIMIYGFCGRLPDNNNLAFEFLNANLWFAENNGPHLCYDNNSQSLLLALNFSLDE
+ STVEKLEREIEVVIRSMENLYHILQDKGITLDANYT"
+ misc_feature 774060..774410
+ /locus_tag="SARI_00758"
+ /note="Tir chaperone protein (CesT) family; Region: CesT;
+ pfam05932"
+ /db_xref="CDD:218814"
+ gene complement(774793..774877)
+ /locus_tag="SARI_00759"
+ misc_RNA complement(774793..774877)
+ /locus_tag="SARI_00759"
+ /product="RyeE RNA"
+ /inference="nucleotide motif:Rfam:RF00112"
+ /note="Rfam score 79.06"
+ gene complement(774961..776325)
+ /locus_tag="SARI_00760"
+ CDS complement(774961..776325)
+ /locus_tag="SARI_00760"
+ /inference="protein motif:BlastProDom:IPR001539"
+ /inference="protein motif:HMMPfam:IPR001539"
+ /inference="protein motif:ScanRegExp:IPR001539"
+ /inference="similar to AA sequence:INSD:CAD02515.1"
+ /note="'KEGG: stm:STM2136 6.5e-247 yegQ; putative protease
+ K08303;
+ COG: COG0826 Collagenase and related proteases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative protease"
+ /protein_id="YP_001569823.1"
+ /db_xref="GI:161502711"
+ /db_xref="InterPro:IPR001539"
+ /translation="MMFKPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEF
+ NHENLQLGINEAHALGKKFYVVVNIAPHNAKLKTFIRDLKPVVEMGPDALIMSDPGLI
+ MLVREHFPTMPIHLSVQANAVNWATVKFWQQMGLTRVILSRELSLEEIEEIRQQVPDM
+ EIEIFVHGALCMAYSGRCLLSGYINKRDPNQGTCTNACRWEYNVQEGKEDVVGNIVHK
+ HEPIPVQNVEPTLGIGAPTDKVFMIEEAQRPGEYMTAFEDEHGTYIMNSKDLRAIAHV
+ ERLTKMGVHSLKIEGRTKSFYYCARTAQVYRKAIDDAAAGKPFDPTLLETLEGLAHRG
+ YTEGFLRRHTHDDYQNYEYGYSVSERQQFVGEFTGERKGQLAAVAVKNKFSVGDSLEL
+ MTPQGNINFTLEQMENAKGEAMPVAPGDGYTVWMPVPQDVTLGYALLMRNFSGESTRN
+ PHAK"
+ misc_feature complement(774994..776322)
+ /locus_tag="SARI_00760"
+ /note="putative protease; Provisional; Region: PRK15452"
+ /db_xref="CDD:237969"
+ misc_feature complement(775291..776100)
+ /locus_tag="SARI_00760"
+ /note="Peptidase family U32; Region: Peptidase_U32;
+ pfam01136"
+ /db_xref="CDD:216321"
+ gene complement(776478..777200)
+ /locus_tag="SARI_00761"
+ CDS complement(776478..777200)
+ /locus_tag="SARI_00761"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:BlastProDom:IPR001867"
+ /inference="protein motif:HMMPfam:IPR001789"
+ /inference="protein motif:HMMPfam:IPR001867"
+ /inference="protein motif:HMMSmart:IPR001789"
+ /inference="protein motif:superfamily:IPR011006"
+ /inference="similar to AA sequence:INSD:AAV76732.1"
+ /note="'response regulator in two-component regulatory
+ system with BaeS; regulator of RNA synthesis, flagellar
+ biosynthesis, chemotaxis and transport'"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional regulator BaeR"
+ /protein_id="YP_001569824.1"
+ /db_xref="GI:161502712"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR001867"
+ /db_xref="InterPro:IPR011006"
+ /translation="MTELPIDENTPRILIVEDEPKLGQLIIDYLRAASYTPTLINHGD
+ KVLPYVRQTPPDLILLDLMLPGTDGLTLCREIRRFSDIPIVMVTAKIEEIDRLLGLEI
+ GADDYICKPYSPREVVARVKTILRRCKPQRELQQLDAESPLMIDESRFQASWCGKALD
+ LTPAEFRLLKTLSLEPGKVFSREQLLNHLYDDYRVVTDRTIDSHIKNLRRKLESLDAE
+ QSFIRAVYGVGYRWEADACRII"
+ misc_feature complement(776481..777200)
+ /locus_tag="SARI_00761"
+ /note="DNA-binding transcriptional regulator BaeR;
+ Provisional; Region: PRK10710"
+ /db_xref="CDD:182665"
+ misc_feature complement(776826..777161)
+ /locus_tag="SARI_00761"
+ /note="Signal receiver domain; originally thought to be
+ unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
+ recently identified in eukaroytes ETR1 Arabidopsis
+ thaliana; this domain receives the signal from the sensor
+ partner in a two-component systems; Region: REC; cd00156"
+ /db_xref="CDD:238088"
+ misc_feature complement(order(776868..776873,776880..776882,
+ 776937..776939,776994..776996,777018..777020,
+ 777147..777152))
+ /locus_tag="SARI_00761"
+ /note="active site"
+ /db_xref="CDD:238088"
+ misc_feature complement(777018..777020)
+ /locus_tag="SARI_00761"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238088"
+ misc_feature complement(order(776994..777002,777006..777011))
+ /locus_tag="SARI_00761"
+ /note="intermolecular recognition site; other site"
+ /db_xref="CDD:238088"
+ misc_feature complement(776865..776873)
+ /locus_tag="SARI_00761"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238088"
+ misc_feature complement(776505..776777)
+ /locus_tag="SARI_00761"
+ /note="Effector domain of response regulator. Bacteria and
+ certain eukaryotes like protozoa and higher plants use
+ two-component signal transduction systems to detect and
+ respond to changes in the environment. The system consists
+ of a sensor histidine kinase and...; Region: trans_reg_C;
+ cd00383"
+ /db_xref="CDD:238225"
+ misc_feature complement(order(776514..776516,776529..776531,
+ 776565..776570,776592..776594,776601..776603,
+ 776655..776660,776715..776717))
+ /locus_tag="SARI_00761"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:238225"
+ gene complement(777197..778600)
+ /locus_tag="SARI_00762"
+ CDS complement(777197..778600)
+ /locus_tag="SARI_00762"
+ /inference="protein motif:FPrintScan:IPR004358"
+ /inference="protein motif:FPrintScan:IPR008358"
+ /inference="protein motif:Gene3D:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003660"
+ /inference="protein motif:HMMPfam:IPR003661"
+ /inference="protein motif:HMMSmart:IPR003594"
+ /inference="protein motif:HMMSmart:IPR003660"
+ /inference="protein motif:HMMSmart:IPR003661"
+ /inference="protein motif:superfamily:IPR003594"
+ /inference="protein motif:superfamily:IPR009082"
+ /inference="similar to AA sequence:REFSEQ:YP_217119.1"
+ /note="'KEGG: sec:SC2132 1.6e-245 baeS, baeR; sensory
+ kinase in two-component regulatoyr system wtih BaeR
+ K07642;
+ COG: COG0642 Signal transduction histidine kinase;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="signal transduction histidine-protein kinase
+ BaeS"
+ /protein_id="YP_001569825.1"
+ /db_xref="GI:161502713"
+ /db_xref="InterPro:IPR003594"
+ /db_xref="InterPro:IPR003660"
+ /db_xref="InterPro:IPR003661"
+ /db_xref="InterPro:IPR004358"
+ /db_xref="InterPro:IPR008358"
+ /db_xref="InterPro:IPR009082"
+ /translation="MKVWRPGITGKLFLAIFATCIVLLISMHWAVRVSFERGFIDYIK
+ HGNEQRLQMLGDALGEQYQQHGNWRFLRNNDRFVFQILRSFEHDNDRDKPGPGMPPHG
+ WRTQFWVVDQNGRVLVGPRSPVPHDGTRRPILVNGAEVGAVIASPVERLTRSTDINFD
+ KQQRRASWMIVALSTLLAALATFLLARGLLAPVKRLVEGTHRLAAGDFTTRVTPTSAD
+ ELGKLAQDFNQLASTLEKNQQMRRDFMADISHELRTPLAVLRGELEAIQDGVRQFTPE
+ SVISLQAEVGTLTKLVDDLHQLSLSDEGALAYQKTTVDLVPLLEVAGGAFSERFTSRE
+ LTLHYALPDSMTVFGDPDRLMQLFNNLLENSLRYTDSGGGLHISAEQRDKSLFLTFAD
+ SAPGVSDEQLQKLFERFYRTEVSRNRASGGSGLGLAICVNIVHAHNGHLHAAHSPFGG
+ VSITVELPLDRDLQRDV"
+ misc_feature complement(777200..778600)
+ /locus_tag="SARI_00762"
+ /note="signal transduction histidine-protein kinase BaeS;
+ Provisional; Region: PRK10549"
+ /db_xref="CDD:182539"
+ misc_feature complement(777893..778027)
+ /locus_tag="SARI_00762"
+ /note="Histidine kinase, Adenylyl cyclase,
+ Methyl-accepting protein, and Phosphatase (HAMP) domain.
+ HAMP is a signaling domain which occurs in a wide variety
+ of signaling proteins, many of which are bacterial. The
+ HAMP domain consists of two alpha helices...; Region:
+ HAMP; cd06225"
+ /db_xref="CDD:100122"
+ misc_feature complement(order(777899..777904,777911..777916,
+ 777920..777925,777932..777937,777941..777946,
+ 777992..777994,777998..778003,778010..778015,
+ 778019..778024))
+ /locus_tag="SARI_00762"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:100122"
+ misc_feature complement(777704..777889)
+ /locus_tag="SARI_00762"
+ /note="Histidine Kinase A (dimerization/phosphoacceptor)
+ domain; Histidine Kinase A dimers are formed through
+ parallel association of 2 domains creating 4-helix
+ bundles; usually these domains contain a conserved His
+ residue and are activated via...; Region: HisKA; cd00082"
+ /db_xref="CDD:119399"
+ misc_feature complement(order(777716..777718,777728..777730,
+ 777737..777739,777749..777751,777758..777760,
+ 777770..777772,777815..777817,777824..777826,
+ 777836..777838,777845..777847,777857..777859,
+ 777869..777871))
+ /locus_tag="SARI_00762"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119399"
+ misc_feature complement(777851..777853)
+ /locus_tag="SARI_00762"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:119399"
+ misc_feature complement(777230..777541)
+ /locus_tag="SARI_00762"
+ /note="Histidine kinase-like ATPases; This family includes
+ several ATP-binding proteins for example: histidine
+ kinase, DNA gyrase B, topoisomerases, heat shock protein
+ HSP90, phytochrome-like ATPases and DNA mismatch repair
+ proteins; Region: HATPase_c; cd00075"
+ /db_xref="CDD:238030"
+ misc_feature complement(order(777242..777244,777248..777253,
+ 777266..777268,777272..777274,777320..777331,
+ 777410..777415,777419..777421,777425..777427,
+ 777431..777433,777500..777502,777509..777511,
+ 777521..777523))
+ /locus_tag="SARI_00762"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature complement(777509..777511)
+ /locus_tag="SARI_00762"
+ /note="Mg2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature complement(order(777323..777325,777329..777331,
+ 777413..777415,777419..777421))
+ /locus_tag="SARI_00762"
+ /note="G-X-G motif; other site"
+ /db_xref="CDD:238030"
+ gene complement(778600..779091)
+ /locus_tag="SARI_00763"
+ CDS complement(778600..779091)
+ /locus_tag="SARI_00763"
+ /inference="similar to AA sequence:REFSEQ:NP_456675.1"
+ /note="'COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569826.1"
+ /db_xref="GI:161502714"
+ /translation="MAFGFFMPSLDTIIVNTALPSMAKLAIGMAVLALNGSKSMGISP
+ QVLAALAAGGAAAILLYLFHAKNQARYLACDCSARPRFHWGYRTVLPGVSAAVCSRLS
+ RRFFCKLVLVFIGVDSRAAHHVFMYTWPCMAVIIALPAIIFARLPNDTQQNMVISRRK
+ RSL"
+ misc_feature complement(<779020..779091)
+ /locus_tag="SARI_00763"
+ /note="putative transporter; Provisional; Region:
+ PRK10504"
+ /db_xref="CDD:182502"
+ misc_feature complement(<778876..>779019)
+ /locus_tag="SARI_00763"
+ /note="putative transporter; Provisional; Region:
+ PRK10504"
+ /db_xref="CDD:182502"
+ misc_feature complement(778606..>778752)
+ /locus_tag="SARI_00763"
+ /note="putative transporter; Provisional; Region:
+ PRK10504"
+ /db_xref="CDD:182502"
+ gene complement(779130..782210)
+ /locus_tag="SARI_00764"
+ CDS complement(779130..782210)
+ /locus_tag="SARI_00764"
+ /inference="protein motif:HMMPfam:IPR001036"
+ /note="'Part of a tripartite efflux system composed of
+ MdtA, MdtB and MdtC; confers resistance against novobiocin
+ and deoxycholate'"
+ /codon_start=1
+ /transl_table=11
+ /product="multidrug efflux system subunit MdtC"
+ /protein_id="YP_001569827.1"
+ /db_xref="GI:161502715"
+ /db_xref="InterPro:IPR001036"
+ /translation="MRFFALFIYRPVATILIAAAITLCGILGFRLLPVAPLPQVDFPV
+ IMVRASLPGASPETMASSVATPLERSLGRIAGVNEMTSSSSLGSTRIILEFNFDRDIN
+ GAARDVQAAINAAQSLLPSGMPSRPTYRKANPSDAPIMILTLTSDSWSQGELYDFAST
+ QLAQTIAQIDGVGDVDVGGSSLPAVRIGLNPQALFNQGVSLDEVRKAIDSANVRRPQG
+ AIEDNVHRWQIQTNDELKTAAEYQPLIIHYKNGAAVRLDDVASVTDSVQDVRNAGMTN
+ AKPAILLMIRKLPETNIIQTVDSIRAKLPELQAMIPAAIDLQIAQDRSPTIRASLQEV
+ EETLAISVALVILVVFLFLRSGRATLIPAVAVPVSLISTFAAMYLCGFSLNNLSLMAL
+ TIATGFVVDDAIVVLENITRHLEAGMKPLQAALQGTQEVGFTVISMSLSLVAVFLPLL
+ LMGGLPGRLLREFAVTLSVAIGISLVVSLTLTPMMCGWMLKSSKPRTQPRKRGVGRLL
+ VALQQSYGTSLKWVLNHTRLVGVVFLGTIALNIWLYIAIPKTFFPEQDTGVLMGGIQA
+ DQSISFQAMRGKLQDFMKIIRDDPAVNNVTGFTGGSRVNSGMMFITLKPRGERKESAQ
+ QIIDRLRVKLTKEPGARLFLMAVQDIRIGGRQANASYQYTLLSDSLAALREWEPKIRK
+ ALSALPQLADINSDHQDNGAEMNLIYDRDTMSRLGIDVQAANSLLNNAFGQRQISTIY
+ QPMNQYKVVMEVDPRYSQDISALEKMFVINHDGKAIPLSYFAQWRPANAPLSVNHQGL
+ SAASTIAFNLPTGTSLSQATEAINRTMTQLGVPPTVRGSFAGTAQVFQQTMNSQLILI
+ MAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLI
+ GIVKKNAIMMVDFALEAQRSGGLTPEQAIFQACLLRFRPIMMTTLAAMFGALPLVLSG
+ GDGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRLRFSRKNSKPVVEI"
+ misc_feature complement(779136..782210)
+ /locus_tag="SARI_00764"
+ /note="multidrug efflux system subunit MdtC; Provisional;
+ Region: PRK10614"
+ /db_xref="CDD:182589"
+ gene complement(782211..785333)
+ /locus_tag="SARI_00765"
+ CDS complement(782211..785333)
+ /locus_tag="SARI_00765"
+ /inference="protein motif:FPrintScan:IPR001036"
+ /inference="protein motif:HMMPfam:IPR001036"
+ /note="'Part of a tripartite efflux system composed of
+ MdtA, MdtB and MdtC which confers resistance against
+ novobiocin and deoxycholate'"
+ /codon_start=1
+ /transl_table=11
+ /product="multidrug efflux system subunit MdtB"
+ /protein_id="YP_001569828.1"
+ /db_xref="GI:161502716"
+ /db_xref="InterPro:IPR001036"
+ /translation="MQVLPPGSTGGPSRLFILRPVATTLLMAAMLLAGIIGYRFLPVA
+ ALPEVDYPTIQVVTLYPGASPDVMTSAVTAPLERQFGQMSGLKQMSSQSSGGASVVTL
+ QFQLTLPLDVAEQEVQAAINAATNLLPSDLPNPPIYSKVNPADPPIMTLAVTSNAVPM
+ TQVEGMVETRVAQKISQVSGVGLVTLAGGQRPAVRVKLNAQAIAALGLTSETIRTAIT
+ GANVNSAKGSLDGPERAVTLSANDQMQSADEYRRLIIAYKNGAPVRLGDVATVEQGAE
+ NSWLGAWANKAPAIVMNVQRQPGANIIATADSIRQMLPQLTESLPKSVKVTVLSDRTT
+ NIRASVRDTQFELMLAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTFAVMVFLDFS
+ INNLTLMALTIATGFVVDDAIVVIENISRYIEKGEKPLAAALKGAGEIGFTIISLTFS
+ LIAVLIPLLFMGDIVGRLFREFAVTLAVAILISAVVSLTLTPMMCARMLSQQSLRKQN
+ RFSRACERLFDRVIASYGRGLAKVLNHPWLTLSVAFATLLLSVMLWIVIPKGFFPVQD
+ NGIIQGTLQAPQSSSYASMAQRQHQVAERILQDPAVQSLTTFVGVDGANPTLNSARLQ
+ INLKSLDERDDRVQQVISRLQTAVATIPGVALYLQPTQDLTIDTQVSRTQYQFTLRAT
+ TLDALSHWAPKLLNALQSLPQLSEVSSDWQDRGLAAWVNVDRDSASRLGISMADVDNA
+ LYNAFGQRLISTIYTQANQYRVVLEHNTANKPGLAALETIRLTGNDGGTIPLSAIASI
+ KQRFTPLSINHLDQFPVTTFSFNVPEGYSLGDAVQAILNTERTLALPADITTQFQGST
+ LAFQAALGNTVWLIVAAVVAMYIVLGVLYESFIHPITILSTLPTAGVGALLALMIAGS
+ ELDIIAIIGIILLIGIVKKNAIMMIDFALAAEREQGMYPRDAIFQACLLRFRPILMTT
+ LAALLGALPLMLSTGVGAELRRPLGIAMVGGLLVSQILTLFTTPVIYLLFDRLSLYVK
+ SRFPRHKEEA"
+ misc_feature complement(782214..785333)
+ /locus_tag="SARI_00765"
+ /note="multidrug efflux system subunit MdtB; Provisional;
+ Region: PRK10503"
+ /db_xref="CDD:182501"
+ misc_feature complement(783870..>784289)
+ /locus_tag="SARI_00765"
+ /note="Protein export membrane protein; Region: SecD_SecF;
+ cl14618"
+ /db_xref="CDD:246677"
+ gene complement(785333..786571)
+ /locus_tag="SARI_00766"
+ CDS complement(785333..786571)
+ /locus_tag="SARI_00766"
+ /inference="protein motif:HMMPfam:IPR006143"
+ /inference="protein motif:HMMTigr:IPR006143"
+ /inference="protein motif:superfamily:IPR011053"
+ /inference="protein motif:superfamily:IPR011055"
+ /inference="similar to AA sequence:SwissProt:Q8ZNQ3"
+ /note="'Part of a tripartite efflux system composed of
+ MdtA, MdtB and MdtC which confers resistance against
+ novobiocin and deoxycholate'"
+ /codon_start=1
+ /transl_table=11
+ /product="multidrug efflux system subunit MdtA"
+ /protein_id="YP_001569829.2"
+ /db_xref="GI:448236205"
+ /db_xref="InterPro:IPR006143"
+ /db_xref="InterPro:IPR011053"
+ /db_xref="InterPro:IPR011055"
+ /translation="MKGSNTFRWAIAIGVVVAAAAFWFWHSRSESLTAAPGVAAQAPH
+ TAAGRRGMRYGPLAPVQAATATTQAVPRYLSGLGTVTAANTVTVRSRVDGQLIALHFQ
+ EGQQVNAGDLLAQIDPSQFKVALAQAQGQLAKDNATLANARRDLARYQQLAKSNLVSR
+ QELDAQQAQVNELQGTITADEANVASAQLQLDWSRITAPVAGRVGLKQVDIGNQISSG
+ DTAGIVVITQTHPIDLIFTLPESDIATVVQAQKAGKTLTVEAWDRTNSHKLSEGVLLS
+ LDNQIDPTTGTIKIKARFTNQDDTLFPNQFVNARMLVDTEQNAVVVPAAAVQMGNEGH
+ FVWVLNDENNVSKKRVKVGIQDNRNVVISAGLSAGDRVVTDGIDRLTEGAKVEVVKPQ
+ LTAADEKSPTRHEGQKGARA"
+ misc_feature complement(785336..786571)
+ /locus_tag="SARI_00766"
+ /note="multidrug efflux system subunit MdtA; Provisional;
+ Region: PRK11556"
+ /db_xref="CDD:183194"
+ misc_feature complement(786173..786322)
+ /locus_tag="SARI_00766"
+ /note="Biotin-lipoyl like; Region: Biotin_lipoyl_2;
+ pfam13533"
+ /db_xref="CDD:205711"
+ misc_feature complement(785669..785989)
+ /locus_tag="SARI_00766"
+ /note="HlyD family secretion protein; Region: HlyD_3;
+ pfam13437"
+ /db_xref="CDD:222128"
+ gene complement(786839..786983)
+ /locus_tag="SARI_00767"
+ misc_RNA complement(786839..786983)
+ /locus_tag="SARI_00767"
+ /product="QUAD RNA"
+ /inference="nucleotide motif:Rfam:RF00113"
+ /note="Rfam score 137.68"
+ gene complement(787011..788315)
+ /locus_tag="SARI_00768"
+ CDS complement(787011..788315)
+ /locus_tag="SARI_00768"
+ /inference="protein motif:HMMPanther:IPR001023"
+ /inference="protein motif:ScanRegExp:IPR013126"
+ /inference="similar to AA sequence:REFSEQ:YP_150049.1"
+ /note="'KEGG: mbo:Mb0358 2.9e-07 dnaK; probable chaperone
+ protein DnaK (heat shock protein 70) (heat shock 70 kda
+ protein) (HSP70) K04043;
+ COG: COG0443 Molecular chaperone;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative chaperone"
+ /protein_id="YP_001569830.1"
+ /db_xref="GI:161502718"
+ /db_xref="InterPro:IPR001023"
+ /db_xref="InterPro:IPR013126"
+ /translation="MRNGRPQLLTMENNSTLLPSMLCAPTREAVSEWLYRHYDVPTTD
+ EETQALLRRAIRYNREEDIEVHAQSVQFGLASLAHYIDDPQEVWFVKSPKSFLGASGL
+ KPQQVALFEDLVCAMMVHIRTMAHSQLPEAITQAVIGRPINFQGLGGDDANRQAQGIL
+ ERAAKRAGFQEVVFQYEPVAAGLDYEATLQEEKRVLVVDIGGGTTDCSMLLMGPQWRQ
+ RADRENSLLGHSGCRVGGNDLDIALAFKNLMPLLGMGGETEKGIALPVLPWWNAVAIN
+ DVPAQSDFYSSANGRLLNDLVRNAREADKVALLLKVWRQRLSYRLVRCAEESKIALSG
+ QADVTARLPFISDELAVAISQQGLEAALDQPLARILEQVQLALESAQEKPDVIYLTGG
+ SARSPLIKKALSEQLPDIPIAGGDDFGSVTAGLARWAEVVFR"
+ misc_feature complement(787014..788315)
+ /locus_tag="SARI_00768"
+ /note="putative chaperone; Provisional; Region: PRK11678"
+ /db_xref="CDD:236954"
+ misc_feature complement(787026..788315)
+ /locus_tag="SARI_00768"
+ /note="Escherichia coli YegD, a putative chaperone
+ protein, and related proteins; Region: YegD_like; cd10231"
+ /db_xref="CDD:212673"
+ misc_feature complement(order(787284..787289,787293..787295,
+ 787335..787337,787347..787349,787356..787361,
+ 787368..787370,787932..787937,788082..788087,
+ 788094..788096,788106..788108,788277..788279))
+ /locus_tag="SARI_00768"
+ /note="putative NEF/HSP70 interaction site [polypeptide
+ binding]; other site"
+ /db_xref="CDD:212673"
+ misc_feature complement(order(787062..787064,787128..787133,
+ 787137..787145,787326..787331,787338..787340,
+ 787605..787610,787698..787700,787704..787721,
+ 787785..787787,787893..787895,788043..788045))
+ /locus_tag="SARI_00768"
+ /note="nucleotide binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:212673"
+ misc_feature complement(order(787635..787646,787788..787790,
+ 787794..787799,787842..787847,787851..787856))
+ /locus_tag="SARI_00768"
+ /note="SBD interface [polypeptide binding]; other site"
+ /db_xref="CDD:212673"
+ gene 788376..788528
+ /locus_tag="SARI_00769"
+ CDS 788376..788528
+ /locus_tag="SARI_00769"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569831.1"
+ /db_xref="GI:161502719"
+ /translation="MPVKKGRDFSEMSSRRQLEYESKALRAISVYAEASNKGEKHVYP
+ ELAAAL"
+ gene 788434..789366
+ /locus_tag="SARI_00770"
+ CDS 788434..789366
+ /locus_tag="SARI_00770"
+ /inference="protein motif:Gene3D:IPR010316"
+ /inference="protein motif:HMMPfam:IPR003265"
+ /inference="protein motif:HMMPfam:IPR010316"
+ /inference="protein motif:HMMSmart:IPR003265"
+ /inference="protein motif:ScanRegExp:IPR000035"
+ /inference="protein motif:superfamily:IPR011257"
+ /inference="protein motif:superfamily:IPR012294"
+ /inference="similar to AA sequence:INSD:AAX66033.1"
+ /note="'inducible, catalyzes the hydrolysis of alkylated
+ DNA, releasing 3-methyladenine, 3-methylguanine,
+ 7-methylguanine and 7-methyladenine'"
+ /codon_start=1
+ /transl_table=11
+ /product="3-methyl-adenine DNA glycosylase II"
+ /protein_id="YP_001569832.1"
+ /db_xref="GI:161502720"
+ /db_xref="InterPro:IPR000035"
+ /db_xref="InterPro:IPR003265"
+ /db_xref="InterPro:IPR010316"
+ /db_xref="InterPro:IPR011257"
+ /db_xref="InterPro:IPR012294"
+ /translation="MKARRYARLAFMLKRRIKEKSMFTLSWQPPYDWSWMLGFLAARA
+ VDGVETVGEGFYARSLVVGEHRGLVSVRPNLSNHTLQITLSAGLLPVASACLAKISRL
+ FDLDCQPAQVAVALGRLGEARPGLRLPGSVDTFEQGVRAILGQLVSVAMAARLTAKVA
+ RRYGETLPDAPDYVCFPGPETLALADPLALKALGMPRRRAEALIHLAQATLVGKLALT
+ APTDIEQSVKHLQTFPGIGRWTANYFALRGWQAKDIFLPDDYLIKQRFAGMTAAQIRQ
+ YAERWKPWRSYALLHIWYTHGWQPSMDSEIAGIQ"
+ misc_feature 788497..789345
+ /locus_tag="SARI_00770"
+ /note="3-methyl-adenine DNA glycosylase II; Provisional;
+ Region: PRK10308"
+ /db_xref="CDD:236671"
+ misc_feature 788497..788832
+ /locus_tag="SARI_00770"
+ /note="AlkA N-terminal domain; Region: AlkA_N; pfam06029"
+ /db_xref="CDD:218862"
+ misc_feature 788836..789315
+ /locus_tag="SARI_00770"
+ /note="endonuclease III; includes endonuclease III
+ (DNA-(apurinic or apyrimidinic site) lyase), alkylbase DNA
+ glycosidases (Alka-family) and other DNA glycosidases;
+ Region: ENDO3c; cd00056"
+ /db_xref="CDD:238013"
+ misc_feature order(788869..788877,788884..788886,789028..789030)
+ /locus_tag="SARI_00770"
+ /note="minor groove reading motif; other site"
+ /db_xref="CDD:238013"
+ misc_feature 789130..789153
+ /locus_tag="SARI_00770"
+ /note="helix-hairpin-helix signature motif; other site"
+ /db_xref="CDD:238013"
+ misc_feature order(789160..789162,789298..789300,789310..789312)
+ /locus_tag="SARI_00770"
+ /note="substrate binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:238013"
+ misc_feature 789205..789207
+ /locus_tag="SARI_00770"
+ /note="active site"
+ /db_xref="CDD:238013"
+ gene complement(789334..792324)
+ /locus_tag="SARI_00771"
+ CDS complement(789334..792324)
+ /locus_tag="SARI_00771"
+ /inference="protein motif:HMMPfam:IPR000160"
+ /inference="protein motif:HMMPfam:IPR001633"
+ /inference="protein motif:HMMPfam:IPR007895"
+ /inference="protein motif:HMMPfam:IPR013656"
+ /inference="protein motif:HMMPfam:IPR013767"
+ /inference="protein motif:HMMSmart:IPR000014"
+ /inference="protein motif:HMMSmart:IPR000160"
+ /inference="protein motif:HMMSmart:IPR001610"
+ /inference="protein motif:HMMSmart:IPR001633"
+ /inference="protein motif:HMMTigr:IPR000014"
+ /inference="protein motif:HMMTigr:IPR000160"
+ /note="'KEGG: eci:UTI89_C2343 0. yegE; putative
+ sensor-type protein;
+ COG: COG2199 FOG: GGDEF domain;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569833.1"
+ /db_xref="GI:161502721"
+ /db_xref="InterPro:IPR000014"
+ /db_xref="InterPro:IPR000160"
+ /db_xref="InterPro:IPR001610"
+ /db_xref="InterPro:IPR001633"
+ /db_xref="InterPro:IPR007895"
+ /db_xref="InterPro:IPR013656"
+ /db_xref="InterPro:IPR013767"
+ /translation="MSKPSQHVFVTVPHPLLRLVSLGLVAFVFTLFSLALSRFGTQLA
+ PLWFPTSIMMVAFYRHAGRLWPGIAVACSLGSIGASLTLFPAASLNFSWMAINIIEAV
+ TGALLLRKLLPRYNPLQNLNDWFRLAIGSAVIPPLLGGLLFWLMAPEAVASKASLIWV
+ LSEAIGALALAPLGLLFKPHYLLRHRDPHLLLETLLTLVITLALSWLAMRYIPWPFTC
+ VIVLLMWSAVRLPRMEAFLIFLATVIMVSLMLANDPTLLATPKIDVMVNMPWLPFLMI
+ LLPANMMTMVMYAFRTERKHITESEARFRNAMEYSAIGMALVGTEGQWLQVNKSLSHF
+ LGYSQDELRAMTFQQLTWPEDLNNDLEQLNMLVRGDINSYSMEKRYYTRSGEVVWALL
+ AVSLVRHKDNQPLYFIAQIEDINDLKQSEQENQRLMERITLANEALFQEKERLHITLD
+ SIGEAVVCIDVDMNITFMNPIAEKMSGWRQENALGVPLLTVLRITSGDKGPLLEDIYR
+ ADRSRSDMEQEMVLHCRNGGSYDIHYSITPLSTLDGDNIGSVLVIQDVTESRKMLRQL
+ SYSATHDALTHLANRASFEKRLQQRLQTIQESPQHHALVFIDLDRFKAVNDSAGHAAG
+ DALLRELASLMLSMLRSGDLLARLGGDEFGLLLPDCNSDSACFTVTRLINAINDYHFM
+ WEGRLHRIGASAGITMINEHNCQLTEVVSQADIACYAAKNSGRSRLTVYEPQDVLTPS
+ RGMMPLEEQWRMIKTNHLLMLARNVVAPRTPEATSFWLVSLRLWTSEGDVMEERAFRA
+ GLADPALHHALDRRVFHEFFHHAATAVASKGLSVALPLSAAGLCSATLIDELLEQREH
+ SPLPPRLLHLIIPADVIVKQAETAVATLQKLRQRGCQIILSQVGRDLHLFNLLNPHIA
+ DYLLLDSDLITNIHESLMDEMLASIIQGHAQRLDIKTLAGPVQNSQVLDTLSSIGVDL
+ IYGDAIAETQPLDLLLNTSYFAIH"
+ misc_feature complement(791419..792324)
+ /locus_tag="SARI_00771"
+ /note="Predicted integral membrane sensor domain [Signal
+ transduction mechanisms]; Region: COG3447"
+ /db_xref="CDD:225978"
+ misc_feature complement(791056..791427)
+ /locus_tag="SARI_00771"
+ /note="PAS domain S-box; Region: sensory_box; TIGR00229"
+ /db_xref="CDD:232884"
+ misc_feature complement(791083..791394)
+ /locus_tag="SARI_00771"
+ /note="PAS domain; PAS motifs appear in archaea,
+ eubacteria and eukarya. Probably the most surprising
+ identification of a PAS domain was that in EAG-like
+ K+-channels. PAS domains have been found to bind ligands,
+ and to act as sensors for light and oxygen in...; Region:
+ PAS; cd00130"
+ /db_xref="CDD:238075"
+ misc_feature complement(order(791170..791172,791185..791187,
+ 791266..791277,791314..791316,791332..791334,
+ 791344..791346))
+ /locus_tag="SARI_00771"
+ /note="putative active site [active]"
+ /db_xref="CDD:238075"
+ misc_feature complement(order(791143..791145,791149..791151,
+ 791236..791241,791248..791250,791272..791274,
+ 791284..791286))
+ /locus_tag="SARI_00771"
+ /note="heme pocket [chemical binding]; other site"
+ /db_xref="CDD:238075"
+ misc_feature complement(790630..790998)
+ /locus_tag="SARI_00771"
+ /note="PAS domain S-box; Region: sensory_box; TIGR00229"
+ /db_xref="CDD:232884"
+ misc_feature complement(790657..790971)
+ /locus_tag="SARI_00771"
+ /note="PAS domain; PAS motifs appear in archaea,
+ eubacteria and eukarya. Probably the most surprising
+ identification of a PAS domain was that in EAG-like
+ K+-channels. PAS domains have been found to bind ligands,
+ and to act as sensors for light and oxygen in...; Region:
+ PAS; cd00130"
+ /db_xref="CDD:238075"
+ misc_feature complement(order(790744..790746,790759..790761,
+ 790837..790839,790846..790854,790891..790893,
+ 790909..790911,790921..790923))
+ /locus_tag="SARI_00771"
+ /note="putative active site [active]"
+ /db_xref="CDD:238075"
+ misc_feature complement(order(790717..790719,790723..790725,
+ 790807..790812,790819..790821,790849..790851,
+ 790861..790863))
+ /locus_tag="SARI_00771"
+ /note="heme pocket [chemical binding]; other site"
+ /db_xref="CDD:238075"
+ misc_feature complement(790132..790671)
+ /locus_tag="SARI_00771"
+ /note="c-di-GMP synthetase (diguanylate cyclase, GGDEF
+ domain) [Signal transduction mechanisms]; Region:
+ COG2199"
+ /db_xref="CDD:225109"
+ misc_feature complement(790144..790614)
+ /locus_tag="SARI_00771"
+ /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region:
+ GGDEF; cd01949"
+ /db_xref="CDD:143635"
+ misc_feature complement(order(790372..790374,790501..790503))
+ /locus_tag="SARI_00771"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:143635"
+ misc_feature complement(order(790369..790380,790384..790386,
+ 790450..790452,790462..790464,790474..790479,
+ 790486..790488))
+ /locus_tag="SARI_00771"
+ /note="active site"
+ /db_xref="CDD:143635"
+ misc_feature complement(order(790312..790314,790396..790398))
+ /locus_tag="SARI_00771"
+ /note="I-site; other site"
+ /db_xref="CDD:143635"
+ misc_feature complement(789370..>789912)
+ /locus_tag="SARI_00771"
+ /note="EAL domain. This domain is found in diverse
+ bacterial signaling proteins. It is called EAL after its
+ conserved residues and is also known as domain of unknown
+ function 2 (DUF2). The EAL domain has been shown to
+ stimulate degradation of a second...; Region: EAL;
+ cd01948"
+ /db_xref="CDD:238923"
+ gene 792655..793296
+ /locus_tag="SARI_00774"
+ CDS 792655..793296
+ /locus_tag="SARI_00774"
+ /inference="protein motif:HMMPanther:IPR000764"
+ /inference="protein motif:HMMPfam:IPR006083"
+ /inference="protein motif:HMMTigr:IPR000764"
+ /inference="similar to AA sequence:SwissProt:P67408"
+ /note="'KEGG: sty:STY2335 9.6e-79 udk; uridine kinase
+ K00876;
+ COG: COG0572 Uridine kinase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569836.2"
+ /db_xref="GI:448236206"
+ /db_xref="InterPro:IPR000764"
+ /db_xref="InterPro:IPR006083"
+ /translation="MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVI
+ PEDSYYKDQSHLSMEERVKTNYDHPNAMDHSLLFQHLQALKRGSAIELPVYSYVEHTR
+ MQETVRVEPKKVIILEGILLLTDARLREEMNFSIFVDTPLDICLMRRIKRDVNERGRS
+ MDSVMAQYQKTVRPMFLQFIEPSKQYADIIVPRGGKNRIAIDILKAKISQFFE"
+ misc_feature 792655..793293
+ /locus_tag="SARI_00774"
+ /note="Uridine kinase [Nucleotide transport and
+ metabolism]; Region: Udk; COG0572"
+ /db_xref="CDD:223645"
+ misc_feature 792682..793278
+ /locus_tag="SARI_00774"
+ /note="Uridine monophosphate kinase (UMPK, EC 2.7.1.48),
+ also known as uridine kinase or uridine-cytidine kinase
+ (UCK), catalyzes the reversible phosphoryl transfer from
+ ATP to uridine or cytidine to yield UMP or CMP. In the
+ primidine nucleotide-salvage pathway; Region: UMPK;
+ cd02023"
+ /db_xref="CDD:238981"
+ misc_feature order(792718..792720,793096..793098,793240..793242)
+ /locus_tag="SARI_00774"
+ /note="ATP-binding site [chemical binding]; other site"
+ /db_xref="CDD:238981"
+ misc_feature order(792793..792795,792859..792861,793099..793101)
+ /locus_tag="SARI_00774"
+ /note="Sugar specificity; other site"
+ /db_xref="CDD:238981"
+ misc_feature order(792802..792804,792850..792852,792937..792939,
+ 792943..792945,792952..792954,793123..793125)
+ /locus_tag="SARI_00774"
+ /note="Pyrimidine base specificity; other site"
+ /db_xref="CDD:238981"
+ gene 793387..793968
+ /gene="dcd"
+ /locus_tag="SARI_00775"
+ CDS 793387..793968
+ /gene="dcd"
+ /locus_tag="SARI_00775"
+ /inference="protein motif:BlastProDom:IPR003232"
+ /inference="protein motif:HMMPfam:IPR008180"
+ /inference="protein motif:HMMTigr:IPR011962"
+ /inference="similar to AA sequence:INSD:CAD02484.1"
+ /note="Catalyzes the formation of dUTP from dCTP in
+ thymidylate biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="deoxycytidine triphosphate deaminase"
+ /protein_id="YP_001569837.1"
+ /db_xref="GI:161502725"
+ /db_xref="InterPro:IPR003232"
+ /db_xref="InterPro:IPR008180"
+ /db_xref="InterPro:IPR011962"
+ /translation="MRLCDRDIEAWLDEGRLSITPRPPVERINGATVDVRLGNKFRTF
+ RGHTAAFIDLSGPKDEVSAALDRVMSDEIVLPDGEAFYLHPGELALAVTYESVTLPPD
+ LVGWLDGRSSLARLGLMVHVTAHRIDPGWSGCIVLEFYNSGKLPLALRPGMLIGALSF
+ EPLSGPAARPYNRRQDAKYRDQQGAVASRIDKD"
+ misc_feature 793615..793866
+ /gene="dcd"
+ /locus_tag="SARI_00775"
+ /note="Trimeric dUTP diphosphatases; Region:
+ trimeric_dUTPase; cd07557"
+ /db_xref="CDD:143638"
+ misc_feature order(793630..793632,793645..793650,793654..793656,
+ 793702..793704,793708..793725,793738..793746,
+ 793759..793761,793771..793773,793792..793794,
+ 793798..793800,793804..793806,793810..793812,
+ 793822..793836,793843..793845,793855..793857)
+ /gene="dcd"
+ /locus_tag="SARI_00775"
+ /note="trimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:143638"
+ misc_feature order(793714..793722,793759..793761,793765..793770,
+ 793777..793779,793789..793794)
+ /gene="dcd"
+ /locus_tag="SARI_00775"
+ /note="active site"
+ /db_xref="CDD:143638"
+ gene 794009..795865
+ /locus_tag="SARI_00776"
+ CDS 794009..795865
+ /locus_tag="SARI_00776"
+ /inference="protein motif:HMMPfam:IPR007844"
+ /note="'YegA; inner membrane protein involved in the
+ assembly of outer membrane proteins (OMPs); asmA-null
+ mutants show low lipopolysaccharide (LPS) levels,
+ suggesting a role in LPS biogenesis and/or in restricting
+ outer membrane fluidity, resulting on altered assembly of
+ OMPs'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative assembly protein"
+ /protein_id="YP_001569838.1"
+ /db_xref="GI:161502726"
+ /db_xref="InterPro:IPR007844"
+ /translation="MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSG
+ YQLQLDGPLRWHVWPQLSILSGRMTLTAQGASEPLVRADNMRLDVALWPLLSHQLHVK
+ QVMLKGGVIQLTPQTEAVRSDDAPIAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVFQ
+ HENDEQVTVRDIHLNMEQDAEHRGTFDFSGRVNRDQRDLSLSFNGTVDASDYPHNLTA
+ GIEQLRWQLQGADLPAQGIEGQGQFQAQWQEAQKRLSFNYLNLTANDSSLTGHVQVTM
+ AERPEWQIDLQSARLNLDNLLPHHNTVAQTNGVASQVQNTLPLTRPVIAARVDAPPYQ
+ GLQSFTAAISLRADSVRWRGMDFTQVSTKMINQAGLLDINELQGKLADGQLSLPGTLD
+ ARTTSPRVIFHPRLNDVEIGTILKAFHYPISLTGKMSLAGDFSGVDIDAEAFRHSWKG
+ KAHVDMSNTRLEGMNFQQLVQQAVERSGGDAQQSQDNMDNATRLDRFTTNLTLNKGTL
+ TLDNMVGQSSMLALTGSGTLDLVEQSCDTQFNLRVLGGWSGDSNLITFLKETPVPLRV
+ YGKWQELNYTLQVDQLLRKYLQDEAKRRLNDWADRNKDTRNGKDVKKLLDKL"
+ misc_feature 794009..795862
+ /locus_tag="SARI_00776"
+ /note="putative assembly protein; Provisional; Region:
+ PRK10833"
+ /db_xref="CDD:236772"
+ misc_feature 795077..795724
+ /locus_tag="SARI_00776"
+ /note="AsmA-like C-terminal region; Region: AsmA_2;
+ pfam13502"
+ /db_xref="CDD:222180"
+ gene complement(795848..795976)
+ /locus_tag="SARI_00777"
+ CDS complement(795848..795976)
+ /locus_tag="SARI_00777"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569839.1"
+ /db_xref="GI:161502727"
+ /translation="MNLNMRCNAGHAFPCLIARRPDKTRRRRHPALPFDQKLQLIQ"
+ gene complement(795954..797534)
+ /locus_tag="SARI_00778"
+ CDS complement(795954..797534)
+ /locus_tag="SARI_00778"
+ /inference="protein motif:HMMPfam:IPR000644"
+ /inference="protein motif:HMMPfam:IPR005170"
+ /inference="protein motif:HMMPfam:IPR005496"
+ /inference="similar to AA sequence:INSD:AAL21023.1"
+ /note="'KEGG: eci:UTI89_C0656 3.6e-24 ybeX; putative
+ transport protein K06189;
+ COG: COG1253 Hemolysins and related proteins containing
+ CBS domains;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569840.1"
+ /db_xref="GI:161502728"
+ /db_xref="InterPro:IPR000644"
+ /db_xref="InterPro:IPR005170"
+ /db_xref="InterPro:IPR005496"
+ /translation="MEWIADPSIWAGLVTLIVIELVLGIDNLVFIAILAEKLPPGQRD
+ RARITGLILAMIMRLLLLASISWLVTLTKPLFSVQALSFSARDLIMLFGGFFLLFKAT
+ MELNERLEGKDSANPTQRKGAKFWAVVAQIVVLDAIFSLDSVITAVGMVDHLAVMMAA
+ VIIAISLMLLASKSLTRFVNNHPTIVILCLSFLLMIGFSLVAEGFGFHIPKGYLYAAI
+ GFSVMIEALNQLAIFNRRRFLSANHTLRQRTTEAVMRLISGKKEDAELDAETAAMLAD
+ HDDSQIFNPQERRMIERVLNLNQRTVSSIMTSRHDIEHIDLNAPEAEIRALLEKNQHT
+ RLVVTGENEQGDLLGVVHVIDLLQQSLRGEPLNLRALIRQPLVFPETLPLLPALEQFR
+ NARTHFAFVVDEFGSVEGIVTLSDVMETIAGNLPNEVEEIDARHDIQKNPDGSWTANG
+ HMPLEDLVQYVPLPLDEKREYHTIAGLLMEYLQRIPKTGEEVQVGNYLLKTLQVESHR
+ VQKVQLIPLHNDESEYEV"
+ misc_feature complement(796824..797534)
+ /locus_tag="SARI_00778"
+ /note="Membrane protein TerC, possibly involved in
+ tellurium resistance [Inorganic ion transport and
+ metabolism]; Region: TerC; COG0861"
+ /db_xref="CDD:223930"
+ misc_feature complement(796281..796631)
+ /locus_tag="SARI_00778"
+ /note="FOG: CBS domain [General function prediction only];
+ Region: COG0517"
+ /db_xref="CDD:223591"
+ misc_feature complement(796275..796604)
+ /locus_tag="SARI_00778"
+ /note="This cd contains two tandem repeats of the
+ cystathionine beta-synthase (CBS pair) domains associated
+ with the CorC_HlyC domain. CorC_HlyC is a transporter
+ associated domain. This small domain is found in Na+/H+
+ antiporters, in proteins involved in...; Region:
+ CBS_pair_CorC_HlyC_assoc; cd04590"
+ /db_xref="CDD:239963"
+ misc_feature complement(795984..796220)
+ /locus_tag="SARI_00778"
+ /note="Transporter associated domain; Region: CorC_HlyC;
+ smart01091"
+ /db_xref="CDD:215020"
+ gene complement(797890..798126)
+ /locus_tag="SARI_00779"
+ CDS complement(797890..798126)
+ /locus_tag="SARI_00779"
+ /inference="similar to AA sequence:REFSEQ:YP_217107.1"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569841.1"
+ /db_xref="GI:161502729"
+ /translation="MAEKINWHHSEKKSIHPQAIDRIIKAYIQAFRHATAPGFLATNT
+ LIILNFRIPLRFHPRSDKNLQRNKGYVLIVFSMS"
+ gene 798209..799348
+ /locus_tag="SARI_00780"
+ CDS 798209..799348
+ /locus_tag="SARI_00780"
+ /inference="protein motif:HMMPfam:IPR003715"
+ /inference="similar to AA sequence:SwissProt:Q8ZNQ9"
+ /note="'COG: COG1596 Periplasmic protein involved in
+ polysaccharide export;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569842.1"
+ /db_xref="GI:161502730"
+ /db_xref="InterPro:IPR003715"
+ /translation="MMKSKMKLMPLLASLSLISGCTVLPGSNMSTMGKDVIKQQDADF
+ DLDRMVNVYPLTPRLVEQLRPRPNVAQPNMSLDQEIASYQYRVGPGDVLNVTVWDHPE
+ LTTPAGQYRSSSDTGNWVQPDGTMFYPYIGKVSVVGKTLSEIRSDITGRLAKYIADPQ
+ VDVNIAAFRSQKAYISGQVNKSGQQAITNVPLTVLDAINAAGGLTDMADWRNVVLTHN
+ GKEQRISLQALMQNGDLSQNRLLYPGDILYVPRNDDLKVFVMGEVKKQSTLKMDFSGM
+ TLTEALGNAEGIDLTTSNASGIFVIRPLKGEGGRGGKIANIYQLDMSDATSLVMATEF
+ RLQPYDVVYVTTAPVARWNRLINQLLPTISGVRYMTDTASDIHSW"
+ misc_feature 798266..799345
+ /locus_tag="SARI_00780"
+ /note="polysaccharide export protein Wza; Provisional;
+ Region: PRK15078"
+ /db_xref="CDD:237903"
+ misc_feature 798428..798706
+ /locus_tag="SARI_00780"
+ /note="Polysaccharide biosynthesis/export protein; Region:
+ Poly_export; pfam02563"
+ /db_xref="CDD:202285"
+ gene 799354..799803
+ /locus_tag="SARI_00781"
+ CDS 799354..799803
+ /locus_tag="SARI_00781"
+ /inference="protein motif:HMMPanther:IPR000106"
+ /inference="protein motif:HMMPfam:IPR000106"
+ /inference="protein motif:HMMSmart:IPR000106"
+ /inference="similar to AA sequence:INSD:AAV76745.1"
+ /note="'Wzb shows phosphatase activity towards the
+ autophosphorylated Wzc protein, which induces colanic acid
+ biosynthesis; catalyzes the phosphorylation of UDP-glucose
+ dehydrogenase, an enzyme involved in colanic acid
+ biosynthesis'"
+ /codon_start=1
+ /transl_table=11
+ /product="tyrosine phosphatase"
+ /protein_id="YP_001569843.1"
+ /db_xref="GI:161502731"
+ /db_xref="InterPro:IPR000106"
+ /translation="MFNKILVVCVGNVCRSPTAERLLKRFHPSLTVASAGLGALVGKG
+ ADPAAASVASAHDLSLENHCARQISARLCREYDLILTMEKCHISTLCDIAPEMRGKVM
+ LFGHWDSEREIPDPYRKSRDAFEAVYTLLERSARQWAQALNAEQGKP"
+ misc_feature 799360..799773
+ /locus_tag="SARI_00781"
+ /note="Low molecular weight phosphatase family; Region:
+ LMWPc; cd00115"
+ /db_xref="CDD:238063"
+ misc_feature 799366..799770
+ /locus_tag="SARI_00781"
+ /note="Low molecular weight phosphotyrosine protein
+ phosphatase; Region: LMWPc; pfam01451"
+ /db_xref="CDD:201802"
+ misc_feature order(799378..799380,799384..799389,799393..799401)
+ /locus_tag="SARI_00781"
+ /note="active site"
+ /db_xref="CDD:238063"
+ gene 799800..801959
+ /locus_tag="SARI_00782"
+ CDS 799800..801959
+ /locus_tag="SARI_00782"
+ /inference="protein motif:HMMPfam:IPR003856"
+ /note="Wzc; catalyzes the autophosphorylation on tyrosine
+ residues which downregulates the biosynthesis of colonic
+ acid (an extracellular polysaccharide)"
+ /codon_start=1
+ /transl_table=11
+ /product="tyrosine kinase"
+ /protein_id="YP_001569844.1"
+ /db_xref="GI:161502732"
+ /db_xref="InterPro:IPR003856"
+ /translation="MTEKVKQSAAATGSDEIDIGRLVGTVIEARWWVLGTTAIFALCA
+ VIYTLFATPIYSADALVQIEQNTGNSLVQDINSALANKPPASDAEIQLIRSRLVLGKT
+ VDDLDLDIAVTKNTFPLFGAGWDRLMGHQNETVKVTTFTRPEAMSGQIFTLKALDDKR
+ YQLVSDGGFSVQGVVGKTLNKGGVTMRVEAIDARPDTEFTVSKFSTLGMINNLQNNLT
+ VTETGKDTGVLSLTFTGEDRDQIRDILNSITRNYLEQDIARKSEEAGKSLAFLAKQLP
+ EVRSRLDVAENKLNAFRQDKDSVDLPLEAKAVLDSMVNIDAQLNELTFKEAEISKLFT
+ KAHPAYRTLLEKRKALEDEKAKLNGRVTAMPKTQQEIVRLTRDVESGQQVYMQLLNKQ
+ QELKITEASTVGDVRIVDPAITQPGVLKPKKALIILGSIILGLLLSVIGVLLRSLFNR
+ GIESPQALEEHGISVYASIPLSEWQKARDSVKTIKGIKRYKQSQLLAVGNPTDLAIEA
+ IRSLRTSLHFAMMQAQNNVLMLTGISPSIGKTFVCANLAAVISQTHKRVLLIDCDMRK
+ GYTHELLGTNNVDGLSDILAGKGEMTSCAKSTAIPNFDLIPRGQVPPNPSELLMSERF
+ GELIAWASSRYDLVLIDTPPILAVTDAAIVGRHVGTTLMVARYAVNTLKEVETSLSRF
+ EQNGIQVKGVILNSIFRRATGYQDYGYYEYEYQSDAK"
+ misc_feature 799800..801905
+ /locus_tag="SARI_00782"
+ /note="tyrosine kinase; Provisional; Region: PRK11519"
+ /db_xref="CDD:183173"
+ misc_feature 799842..>800129
+ /locus_tag="SARI_00782"
+ /note="Chain length determinant protein; Region: Wzz;
+ pfam02706"
+ /db_xref="CDD:217194"
+ misc_feature <800430..800552
+ /locus_tag="SARI_00782"
+ /note="Chain length determinant protein; Region: Wzz;
+ cl15801"
+ /db_xref="CDD:247074"
+ misc_feature 800895..>801071
+ /locus_tag="SARI_00782"
+ /note="G-rich domain on putative tyrosine kinase; Region:
+ GNVR; pfam13807"
+ /db_xref="CDD:222392"
+ misc_feature 801408..>801536
+ /locus_tag="SARI_00782"
+ /note="The Fer4_NifH superfamily contains a variety of
+ proteins which share a common ATP-binding domain.
+ Functionally, proteins in this superfamily use the energy
+ from hydrolysis of NTP to transfer electron or ion;
+ Region: Fer4_NifH; cl17203"
+ /db_xref="CDD:247757"
+ gene 802046..802888
+ /locus_tag="SARI_00783"
+ CDS 802046..802888
+ /locus_tag="SARI_00783"
+ /inference="protein motif:HMMPfam:IPR001173"
+ /inference="similar to AA sequence:REFSEQ:NP_804601.1"
+ /note="'KEGG: eci:UTI89_C2333 5.4e-140 wcaA; putative
+ colanic acid biosynthesis glycosyltransferase WcaA;
+ COG: COG0463 Glycosyltransferases involved in cell wall
+ biogenesis;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative glycosyl transferase"
+ /protein_id="YP_001569845.1"
+ /db_xref="GI:161502733"
+ /db_xref="InterPro:IPR001173"
+ /translation="MTTDNPLISIYMPTWNRQQLAIRAIKSVLRQDYQHWEMIIVDDC
+ SSSYQQLQQFVEDLNDSRVRYTHNESNTGACAVRNQAIMQAQGHYITGIDDDDEWTPN
+ RLSVFLAHKHQLTTHAFLYANDYVCEGEVYSQPASLPLYPKSPYSRRLFYKRNIIGNQ
+ VFTWAWRFKACLFDTELKAAQDYDIFLRMVVEYGEPWKVEEATQILHINHGEMQITSS
+ PKKFSGYFHFYRKHKDKFDRASKKYQLFTLYQIRNKRMTWRTLLTLLSVRNSKRLAAG
+ LRGR"
+ misc_feature 802049..802885
+ /locus_tag="SARI_00783"
+ /note="putative glycosyl transferase; Provisional; Region:
+ PRK10018"
+ /db_xref="CDD:182197"
+ misc_feature 802070..802552
+ /locus_tag="SARI_00783"
+ /note="Glycosyl transferase family 2; Region:
+ Glycos_transf_2; pfam00535"
+ /db_xref="CDD:215980"
+ misc_feature order(802082..802084,802088..802090,802166..802168,
+ 802325..802327,802331..802333)
+ /locus_tag="SARI_00783"
+ /note="active site"
+ /db_xref="CDD:132997"
+ gene 802939..803379
+ /locus_tag="SARI_00784"
+ CDS 802939..803379
+ /locus_tag="SARI_00784"
+ /inference="protein motif:ScanRegExp:IPR001451"
+ /inference="protein motif:superfamily:IPR011004"
+ /inference="similar to AA sequence:REFSEQ:YP_217102.1"
+ /note="'acetyltransferase believed to catalyze the
+ addition of the acetyl group that is attached through an O
+ linkage to the first fucosyl residue of the colanic acid
+ repetitive unit (E unit); wcaB is induced in sessile
+ bacteria and by osmotic shock, and repressed when grown in
+ rich medium'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative colanic acid biosynthesis
+ acetyltransferase WcaB"
+ /protein_id="YP_001569846.1"
+ /db_xref="GI:161502734"
+ /db_xref="InterPro:IPR001451"
+ /db_xref="InterPro:IPR011004"
+ /translation="MVLAYRIAHFCSVWRKKNVLNNLWAAPVLVLYRVITECLFGYEI
+ QAAATIGRRFTIHHGYAVVINKHVIAGDDFTIRHGVTIGNRGTNSLACPVIGDGVELG
+ ANVILLGDITIGNHVTVGAGSVVLDSIPDHALVVGEKARVKVST"
+ misc_feature 802939..803376
+ /locus_tag="SARI_00784"
+ /note="putative acyl transferase; Provisional; Region:
+ PRK10191"
+ /db_xref="CDD:182295"
+ misc_feature 803056..803349
+ /locus_tag="SARI_00784"
+ /note="Serine acetyltransferase (SAT): SAT catalyzes the
+ CoA-dependent acetylation of the side chain hydroxyl group
+ of L-serine to form O-acetylserine, as the first step of a
+ two-step biosynthetic pathway in bacteria and plants
+ leading to the formation of...; Region: LbH_SAT; cd03354"
+ /db_xref="CDD:100045"
+ misc_feature order(803059..803061,803065..803067,803110..803112,
+ 803299..803301,803308..803310,803314..803316)
+ /locus_tag="SARI_00784"
+ /note="trimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:100045"
+ misc_feature order(803107..803112,803167..803172,803188..803193,
+ 803212..803214,803245..803247,803290..803292,
+ 803296..803301,803308..803310,803314..803316,
+ 803338..803340)
+ /locus_tag="SARI_00784"
+ /note="active site"
+ /db_xref="CDD:100045"
+ misc_feature order(803107..803112,803188..803190,803212..803214)
+ /locus_tag="SARI_00784"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:100045"
+ misc_feature order(803167..803172,803188..803193,803245..803247,
+ 803290..803292,803296..803301,803308..803310,
+ 803314..803316,803338..803340)
+ /locus_tag="SARI_00784"
+ /note="CoA binding site [chemical binding]; other site"
+ /db_xref="CDD:100045"
+ gene 803376..804593
+ /locus_tag="SARI_00785"
+ CDS 803376..804593
+ /locus_tag="SARI_00785"
+ /inference="similar to AA sequence:REFSEQ:NP_456660.1"
+ /note="'KEGG: eci:UTI89_C2331 8.9e-179 wcaC; putative
+ glycosyltransferase K00754;
+ COG: COG0438 Glycosyltransferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative glycosyl transferase"
+ /protein_id="YP_001569847.1"
+ /db_xref="GI:161502735"
+ /translation="MNILQFNVRLAEGGAAGVALDLHLRALQKGLTSHFVYGYGKGGK
+ KSVSHHRYPQVVKQTPRGTAIANIALFRFVNRDLFGNLNNLYRTVIQTSGPLVLHFHV
+ LHSYWLNLAGIVAFCEKVKMQKTDVTLVWTLHDHWSVTGRCAFTDGCDGWKNGCQKCP
+ TLSNYPPVRVDRAHQLIGGKRQRFRDMLRLGCRFISPSQHVAGAFNRIYGADLCRIIN
+ NGIDLATEAILAELSPAPQIADKPRIAIVAHDLRYDGKTDQRLVHDMMALGEKIELHT
+ FGKFSPFTGQNVVNHGFETDKRKLMSALNEMDALVFSSRVDNYPLILCEALSIGVPVL
+ ATHSEAAQEVLAKSGGQTFAATDVLRLAQRRKPEIAQAVFGATLDAFRMRSRVAYSGQ
+ QMLEEYVSFYQNL"
+ misc_feature 803376..804590
+ /locus_tag="SARI_00785"
+ /note="colanic acid biosynthesis glycosyl transferase
+ WcaC; Region: WcaC; TIGR04015"
+ /db_xref="CDD:188530"
+ misc_feature 803376..804380
+ /locus_tag="SARI_00785"
+ /note="Glycosyltransferases catalyze the transfer of sugar
+ moieties from activated donor molecules to specific
+ acceptor molecules, forming glycosidic bonds. The acceptor
+ molecule can be a lipid, a protein, a heterocyclic
+ compound, or another carbohydrate...; Region:
+ Glycosyltransferase_GTB_type; cl10013"
+ /db_xref="CDD:245227"
+ misc_feature <804294..804569
+ /locus_tag="SARI_00785"
+ /note="Glycosyltransferases catalyze the transfer of sugar
+ moieties from activated donor molecules to specific
+ acceptor molecules, forming glycosidic bonds. The acceptor
+ molecule can be a lipid, a protein, a heterocyclic
+ compound, or another carbohydrate...; Region:
+ Glycosyltransferase_GTB_type; cl10013"
+ /db_xref="CDD:245227"
+ gene 804568..805782
+ /gene="wcaD"
+ /locus_tag="SARI_00786"
+ CDS 804568..805782
+ /gene="wcaD"
+ /locus_tag="SARI_00786"
+ /inference="similar to AA sequence:REFSEQ:YP_150062.1"
+ /note="essential for colanic acid biosynthesis; colanic
+ acid is an exopolysaccharide produced under stress
+ conditions that confers acid and heat tolerance"
+ /codon_start=1
+ /transl_table=11
+ /product="putative colanic acid biosynthesis protein"
+ /protein_id="YP_001569848.1"
+ /db_xref="GI:161502736"
+ /translation="MSRSIRICSYLLLPLIYLLVNVKIAQLGESFPITIVTFLPLLLL
+ LFVERISVKKLLIALGIGMGLTAFNFLFGQSLNAGKYVTSTMLFVYIVVIIGMVWSIR
+ FKTISAHNHRKILRFFYLVVSVVVTLAAVEMAQIILTGASNIMEGISKYLIYSNSYVL
+ NFIKFGGKRTTALYFEPAFFALALISIWLSIKQFGIKTPKSDAMILAGIILSGSFSGV
+ MTFILFYLLEWAFQYLNKDAIKKKLPLALVSLTLFLVGVIIAFPYIATRLGDLGTEGS
+ SSYYRIVGPLVMVVYSLTHIDGVVRFGSLYEYVASFGIFNGADVGKTIDNGLYLLIIY
+ FSWFAVLMTLWYMGKVLKMALNAFGDNRNFRVQLYLFTPVSLFFTGSIFSPEYAFLIV
+ CPFILRKALKIS"
+ misc_feature 804568..805779
+ /gene="wcaD"
+ /locus_tag="SARI_00786"
+ /note="putative colanic acid biosynthesis protein;
+ Provisional; Region: wcaD; cl08075"
+ /db_xref="CDD:189184"
+ gene 805795..806541
+ /locus_tag="SARI_00787"
+ CDS 805795..806541
+ /locus_tag="SARI_00787"
+ /inference="protein motif:HMMPfam:IPR001173"
+ /inference="similar to AA sequence:INSD:AAV76751.1"
+ /note="'KEGG: eci:UTI89_C2329 6.8e-94 wcaE; putative
+ colanic acid biosynthesis glycosyl transferase;
+ COG: COG0463 Glycosyltransferases involved in cell wall
+ biogenesis;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative glycosyl transferase"
+ /protein_id="YP_001569849.1"
+ /db_xref="GI:161502737"
+ /db_xref="InterPro:IPR001173"
+ /translation="MFLSVVTVAFRNYEGVVKTWRSLRNLARDPGLSFEWIVVDGGSE
+ DGTREFLQKRNGEFNLRFISEKDRGIYDAMNKGIALARGRYTLFLNSGDAFHDDVALF
+ VRQLARQKSEAMYIGDALLDFGGGHKIRRKAKPGCYIYHSLPASHQAIFFPTAGLKKH
+ PYDLQYNVSSDYALAARLYKAGYPFRRIKGLVSEFSMGGVSTSNNLELCQDAKNVQRK
+ ILHVPGFWAQLSYLLRLKTTGKTKARYNKV"
+ misc_feature 805795..806538
+ /locus_tag="SARI_00787"
+ /note="putative glycosyl transferase; Provisional; Region:
+ PRK10063"
+ /db_xref="CDD:182218"
+ misc_feature 805804..806406
+ /locus_tag="SARI_00787"
+ /note="WfgS and WfeV are involved in O-antigen
+ biosynthesis; Region: GT_2_WfgS_like; cd06433"
+ /db_xref="CDD:133055"
+ misc_feature order(805912..805914,806305..806307,806311..806313)
+ /locus_tag="SARI_00787"
+ /note="metal-binding site"
+ /db_xref="CDD:133055"
+ gene 806557..807111
+ /locus_tag="SARI_00788"
+ CDS 806557..807111
+ /locus_tag="SARI_00788"
+ /inference="protein motif:ScanRegExp:IPR001451"
+ /inference="protein motif:superfamily:IPR011004"
+ /inference="similar to AA sequence:REFSEQ:YP_217098.1"
+ /note="acetyltransferase believed to catalyze the addition
+ of the acetyl group that is attached through an O linkage
+ to the first fucosyl residue of the colanic acid
+ repetitive unit (E unit)"
+ /codon_start=1
+ /transl_table=11
+ /product="putative colanic acid biosynthesis
+ acetyltransferase WcaF"
+ /protein_id="YP_001569850.1"
+ /db_xref="GI:161502738"
+ /db_xref="InterPro:IPR001451"
+ /db_xref="InterPro:IPR011004"
+ /translation="MQDLNGFTVPKGFRGANVLKVQLWWAVQATLFAWSPQILYRWRA
+ FLLRLFGARIGKDVVIRPSVKITYPWKLTVGDYAWVGDDAVLYTLGEISIGAHAVISQ
+ KSYLCTGSHDYTSDHFDINAAPIVIGEKCWLATDVFVAPGVTIGYGTVVGARSSVFKS
+ LPANAICRGNPAVVTRQRVQKVTP"
+ misc_feature 806557..807096
+ /locus_tag="SARI_00788"
+ /note="colanic acid biosynthesis acetyltransferase WcaF;
+ Region: WcaF; TIGR04008"
+ /db_xref="CDD:188523"
+ misc_feature 806761..807075
+ /locus_tag="SARI_00788"
+ /note="wcaF-like: This group is composed of the protein
+ product of the E. coli wcaF gene and similar proteins.
+ WcaF is part of the gene cluster responsible for the
+ biosynthesis of the extracellular polysaccharide colanic
+ acid. The wcaF protein is predicted to...; Region:
+ LbH_wcaF_like; cd05825"
+ /db_xref="CDD:100063"
+ misc_feature order(806785..806787,806791..806793,806815..806817,
+ 806845..806847,806851..806853,806869..806871,
+ 806887..806895,806944..806946,806950..806952,
+ 806959..806961,807016..807018,807064..807066)
+ /locus_tag="SARI_00788"
+ /note="putative trimer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:100063"
+ misc_feature order(806791..806793,806797..806799,806887..806889,
+ 806893..806895,806950..806952,806956..806961,
+ 806974..806976,807010..807015,807028..807033,
+ 807058..807063,807067..807069)
+ /locus_tag="SARI_00788"
+ /note="putative active site [active]"
+ /db_xref="CDD:100063"
+ misc_feature order(806791..806793,806797..806799,806887..806889)
+ /locus_tag="SARI_00788"
+ /note="putative substrate binding site [chemical binding];
+ other site"
+ /db_xref="CDD:100063"
+ misc_feature order(806887..806889,806893..806895,806950..806952,
+ 806956..806961,806974..806976,807004..807006,
+ 807010..807015,807028..807033,807052..807054,
+ 807058..807063,807067..807069)
+ /locus_tag="SARI_00788"
+ /note="putative CoA binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:100063"
+ gene 807129..808256
+ /locus_tag="SARI_00789"
+ CDS 807129..808256
+ /locus_tag="SARI_00789"
+ /inference="protein motif:HMMPfam:IPR001509"
+ /inference="protein motif:HMMTigr:IPR006368"
+ /inference="protein motif:ScanRegExp:IPR002198"
+ /inference="similar to AA sequence:REFSEQ:YP_217097.1"
+ /note="'KEGG: stm:STM2109 6.6e-199 gmd; GDP-D-mannose
+ dehydratase K01711;
+ COG: COG1089 GDP-D-mannose dehydratase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569851.1"
+ /db_xref="GI:161502739"
+ /db_xref="InterPro:IPR001509"
+ /db_xref="InterPro:IPR002198"
+ /db_xref="InterPro:IPR006368"
+ /translation="MKMSKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTE
+ RVDHIYQDPHSSNPKFHLHYGDLTDASNLTRILQEVQPDEVYNLGAMSHVAVSFESPE
+ YTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYA
+ VAKLYAYWITVNYRESYGIYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCL
+ YLGNMDSLRDWGHAKDYVRMQWMMLQQEQPEDFVIATGVQYSVRQFVELAAAQLGIKL
+ RFEGEGIDEKGIVVSVTGHDAPGVKPGDVIVAVDPRYFRPAEVETLLGDPSKAHEKLG
+ WKPEITLSEMVSEMVANDLEAAKKHSLLKSHGYEVAIALES"
+ misc_feature 807135..808205
+ /locus_tag="SARI_00789"
+ /note="GDP-D-mannose dehydratase [Cell envelope
+ biogenesis, outer membrane]; Region: Gmd; COG1089"
+ /db_xref="CDD:224014"
+ misc_feature 807144..808190
+ /locus_tag="SARI_00789"
+ /note="GDP-mannose 4,6 dehydratase, extended (e) SDRs;
+ Region: GDP_MD_SDR_e; cd05260"
+ /db_xref="CDD:187570"
+ misc_feature order(807159..807176,807234..807242,807321..807329,
+ 807390..807398,807402..807404,807447..807449,
+ 807525..807533,807603..807605,807615..807617,
+ 807684..807698)
+ /locus_tag="SARI_00789"
+ /note="NADP-binding site; other site"
+ /db_xref="CDD:187570"
+ misc_feature order(807165..807170,807234..807251,807258..807263,
+ 807318..807326,807330..807344,807348..807356,
+ 807360..807362,807396..807407,807414..807416,
+ 807420..807431,807441..807446,807456..807458,
+ 807465..807470,807477..807479,807486..807491,
+ 807582..807593,807597..807602,807609..807614,
+ 807618..807623,807630..807635,807639..807647,
+ 807651..807659,807717..807722,808074..808079)
+ /locus_tag="SARI_00789"
+ /note="homotetramer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:187570"
+ misc_feature order(807402..807410,807531..807539,807603..807605,
+ 807690..807692,807717..807725,807732..807734,
+ 807783..807794,807801..807803,807807..807809,
+ 807909..807911,808065..808067,808071..808073,
+ 808080..808085)
+ /locus_tag="SARI_00789"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:187570"
+ misc_feature order(807420..807422,807429..807431,807441..807446,
+ 807453..807458,807465..807470,807477..807479,
+ 807582..807593,807597..807602,807609..807614,
+ 807618..807623,807630..807635,807639..807647,
+ 807651..807659,808074..808079)
+ /locus_tag="SARI_00789"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:187570"
+ misc_feature order(807450..807452,807531..807533,807603..807605,
+ 807615..807617)
+ /locus_tag="SARI_00789"
+ /note="active site"
+ /db_xref="CDD:187570"
+ gene 808259..809224
+ /locus_tag="SARI_00790"
+ CDS 808259..809224
+ /locus_tag="SARI_00790"
+ /inference="protein motif:HMMPfam:IPR001509"
+ /inference="similar to AA sequence:REFSEQ:NP_456656.1"
+ /note="'KEGG: stm:STM2108 8.2e-169 wcaG; bifunctional GDP
+ fucose synthetase in colanic acid biosyntheis K02377;
+ COG: COG0451 Nucleoside-diphosphate-sugar epimerases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569852.1"
+ /db_xref="GI:161502740"
+ /db_xref="InterPro:IPR001509"
+ /translation="MNKQRIFVAGHRGMVGSAIVRQLAQRGDVELVLRTRDELDLLDG
+ RAVQAFFAGARIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHLHNVNKL
+ LFLGSSCIYPKLATQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRS
+ VMPTNLYGPHDNFHPDNSHVIPALLRRFHEAAQSNAPDVVVWGSGTPMREFLHVDDMA
+ AASIHVMELAREVWQENTEPMLSHINVGSGVDCTIRELAQTIAKVVGYKGRVVFDAAK
+ PDGTPRKLLDVTRLHQLGWYHEISLEAGLAGTYQWFLENQQRFRG"
+ misc_feature 808271..809197
+ /locus_tag="SARI_00790"
+ /note="GDP-fucose synthetase, extended (e) SDRs; Region:
+ GDP_FS_SDR_e; cd05239"
+ /db_xref="CDD:187550"
+ misc_feature 808277..809203
+ /locus_tag="SARI_00790"
+ /note="GDP-4-keto-6-deoxymannose-3,
+ 5-epimerase-4-reductase; Region: PLN02725"
+ /db_xref="CDD:178326"
+ misc_feature order(808286..808288,808292..808303,808364..808366,
+ 808373..808384,808442..808450,808454..808456,
+ 808514..808516,808571..808579,808664..808666,
+ 808676..808678,808745..808750,808754..808756)
+ /locus_tag="SARI_00790"
+ /note="NADP binding site [chemical binding]; other site"
+ /db_xref="CDD:187550"
+ misc_feature order(808505..808507,808577..808579,808664..808666,
+ 808676..808678)
+ /locus_tag="SARI_00790"
+ /note="active site"
+ /db_xref="CDD:187550"
+ misc_feature order(808577..808579,808664..808666,808751..808753,
+ 808808..808810,808859..808861,808883..808885)
+ /locus_tag="SARI_00790"
+ /note="putative substrate binding site [chemical binding];
+ other site"
+ /db_xref="CDD:187550"
+ gene 809227..809700
+ /locus_tag="SARI_00791"
+ CDS 809227..809700
+ /locus_tag="SARI_00791"
+ /inference="protein motif:Gene3D:IPR000086"
+ /inference="protein motif:HMMPfam:IPR000086"
+ /inference="protein motif:ScanRegExp:IPR000086"
+ /inference="protein motif:superfamily:IPR000086"
+ /inference="similar to AA sequence:SwissProt:Q9F7A2"
+ /note="'KEGG: sec:SC2108 5.9e-79 wcaI; putative glycosyl
+ transferase in colanic acid biosynthesis K03207;
+ COG: COG0494 NTP pyrophosphohydrolases including oxidative
+ damage repair enzymes;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569853.1"
+ /db_xref="GI:161502741"
+ /db_xref="InterPro:IPR000086"
+ /translation="MFLRQEDFAAVVRATPLISLDFIVENGQGEILLGQRLNRPAQGY
+ WFVPGGRVCKDETLEAAFERLTQAELGVRLPLAAGTFYGVWQHFYDDNFSGADFSTHY
+ IVLGFRLRVAESALHLPDAQHGSYRWLTPEQLLASDNVHDNSRAYFFPDAPAVGL"
+ misc_feature 809242..809670
+ /locus_tag="SARI_00791"
+ /note="GDP-mannose glycosyl hydrolase (AKA GDP-mannose
+ mannosyl hydrolase (GDPMH)) is a member of the Nudix
+ hydrolase superfamily. This class of enzymes is unique
+ from other members of the superfamily in two aspects.
+ First, it contains a modified Nudix...; Region: GDPMH;
+ cd03430"
+ /db_xref="CDD:239522"
+ misc_feature order(809248..809250,809281..809283,809287..809289,
+ 809332..809334,809338..809340,809362..809364,
+ 809371..809379,809431..809433,809485..809487,
+ 809491..809493,809503..809505,809530..809532,
+ 809590..809592)
+ /locus_tag="SARI_00791"
+ /note="active site"
+ /db_xref="CDD:239522"
+ misc_feature order(809248..809250,809332..809334,809338..809340,
+ 809371..809379,809431..809433,809503..809505,
+ 809530..809532,809590..809592)
+ /locus_tag="SARI_00791"
+ /note="GDP-Mannose binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:239522"
+ misc_feature order(809260..809265,809269..809271,809278..809280,
+ 809377..809379,809386..809391,809395..809403,
+ 809467..809469,809482..809484,809521..809523,
+ 809527..809529)
+ /locus_tag="SARI_00791"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:239522"
+ misc_feature 809374..809442
+ /locus_tag="SARI_00791"
+ /note="modified nudix motif"
+ /db_xref="CDD:239522"
+ misc_feature order(809431..809433,809590..809592)
+ /locus_tag="SARI_00791"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:239522"
+ gene 809697..810920
+ /locus_tag="SARI_00792"
+ CDS 809697..810920
+ /locus_tag="SARI_00792"
+ /inference="protein motif:HMMPfam:IPR001296"
+ /inference="similar to AA sequence:REFSEQ:YP_217094.1"
+ /note="'KEGG: eci:UTI89_C2324 1.2e-188 wcaI; putative
+ colanic biosynthesis glycosyl transferase K03208;
+ COG: COG0438 Glycosyltransferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative glycosyl transferase"
+ /protein_id="YP_001569854.1"
+ /db_xref="GI:161502742"
+ /db_xref="InterPro:IPR001296"
+ /translation="MKILVYGINYSPELTGIGKYTGEMVEWMTREGHEVRVITAPPYY
+ PQWKVGERYSAWRYRREEGEATVWRCPLYVPKQPSTLKRLLHLGSFALSSFFPLMAQR
+ RWKPDRIIGVVPTLFCTPGMRLLAKLSGARTVLHIQDYEVDAMLGLGMAGKGKRGSVA
+ RLATAFERSALRNVDNVSTISRSMMNKAREKGVAAEKILFFPNWSEVARFQDVNDADV
+ TALRQQFGLPEGKKIVLYSGNIGEKQGLEKVINAAERLRDRPLIFAIVGQGGGKARLE
+ NMARERDLPNIKFLPLQPYNALPALLKMGDCHLVVQKRGAADAVLPSKLTNILAAGGN
+ AVITAEPHTELGQLCARYPGIAVCVEPESTDALVAGISQALAMPKNNTTAREYAERTL
+ NKENLLRQFIADIRG"
+ misc_feature 809697..810917
+ /locus_tag="SARI_00792"
+ /note="colanic acid biosynthesis glycosyl transferase
+ WcaI; Region: wcaI; TIGR04007"
+ /db_xref="CDD:188522"
+ misc_feature 809700..810902
+ /locus_tag="SARI_00792"
+ /note="This family is most closely related to the GT1
+ family of glycosyltransferases. wbuB in E. coli is
+ involved in the biosynthesis of the O26 O-antigen. It has
+ been proposed to function as an N-acetyl-L-fucosamine
+ (L-FucNAc) transferase; Region: GT1_wbuB_like; cd03794"
+ /db_xref="CDD:99968"
+ gene 810917..812359
+ /locus_tag="SARI_00793"
+ CDS 810917..812359
+ /locus_tag="SARI_00793"
+ /inference="protein motif:BlastProDom:IPR013794"
+ /inference="protein motif:HMMPfam:IPR001538"
+ /inference="protein motif:HMMPfam:IPR005835"
+ /inference="protein motif:HMMTigr:IPR006375"
+ /inference="protein motif:superfamily:IPR011051"
+ /inference="similar to AA sequence:INSD:AAG41723.1"
+ /note="'KEGG: sec:SC2106 2.9e-260 manC;
+ mannose-1-phosphate in colanic acid gene cluster K00971;
+ COG: COG0662 Mannose-6-phosphate isomerase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569855.1"
+ /db_xref="GI:161502743"
+ /db_xref="InterPro:IPR001538"
+ /db_xref="InterPro:IPR005835"
+ /db_xref="InterPro:IPR006375"
+ /db_xref="InterPro:IPR011051"
+ /db_xref="InterPro:IPR013794"
+ /translation="MIMRQTKLYPVVMAGGSGSRLWPLSRVLYPKQFLCLKGDLTMLQ
+ TTICRLNGVECESPVVICNEQHRFIVAEQLRQLNKLTENIILEPAGRNTAPAIALAAL
+ AATRQHTDCDPLMLVLAADHAIANEEAFRDAVRGAMPYADAGKLVTFGIVPDLPETGY
+ GYIRRGDVVPGATDAVAFEVAQFVEKPGLETAQAYVASGDYYWNSGMFLFRAGRYLEE
+ LKKFRPDILAACEQAMRGVDPDLDFIRVDEEAFLACPEESIDYAVMERTADAVVMPMD
+ AGWSDVGSWSSLWEISAHTPEGNVHHGDVISHKTENSYVYAESGLVTTVGVKDLVVVQ
+ TKDAVLIADRYAVQDVKKVVEKIKADGRHEHHMHREVYRPWGKYDSIDAGERYQVKRI
+ TVKPGEGLSVQMHHHRAEHWVVVAGTARVTINGEVKLLGENESIYIPLGATHCLENPG
+ KIPLDLIEVRSGSYLEEDDVVRFADRYGRV"
+ misc_feature 810923..812356
+ /locus_tag="SARI_00793"
+ /note="mannose-1-phosphate guanyltransferase; Provisional;
+ Region: cpsB; PRK15460"
+ /db_xref="CDD:185357"
+ misc_feature 810938..811780
+ /locus_tag="SARI_00793"
+ /note="GDP-M1P_Guanylyltransferase catalyzes the formation
+ of GDP-Mannose; Region: GDP-M1P_Guanylyltransferase;
+ cd02509"
+ /db_xref="CDD:133003"
+ misc_feature order(810953..810955,810959..810961,811277..811279)
+ /locus_tag="SARI_00793"
+ /note="Substrate binding site; other site"
+ /db_xref="CDD:133003"
+ misc_feature 811916..812341
+ /locus_tag="SARI_00793"
+ /note="Mannose-6-phosphate isomerase; Region:
+ MannoseP_isomer; pfam01050"
+ /db_xref="CDD:144587"
+ gene 812504..813871
+ /locus_tag="SARI_00794"
+ CDS 812504..813871
+ /locus_tag="SARI_00794"
+ /inference="protein motif:FPrintScan:IPR005841"
+ /inference="protein motif:HMMPfam:IPR005843"
+ /inference="protein motif:HMMPfam:IPR005844"
+ /inference="protein motif:HMMPfam:IPR005845"
+ /inference="protein motif:HMMPfam:IPR005846"
+ /inference="protein motif:ScanRegExp:IPR005841"
+ /inference="similar to AA sequence:INSD:AAG41714.1"
+ /note="'KEGG: stm:STM2104 1.3e-227 cpsG;
+ phosphomannomutase in colanic acid gene cluster K01840;
+ COG: COG1109 Phosphomannomutase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569856.1"
+ /db_xref="GI:161502744"
+ /db_xref="InterPro:IPR005841"
+ /db_xref="InterPro:IPR005843"
+ /db_xref="InterPro:IPR005844"
+ /db_xref="InterPro:IPR005845"
+ /db_xref="InterPro:IPR005846"
+ /translation="MTKLTCFKAYDIRGRLGEELNEDIAWRIGRACGEYLKPKTIVLG
+ GDVRLTSESLKLALAKGLQDAGVDVLDIGLAGTEEIYFATFHLGVDGGIEVTASHNPM
+ DYNGMKLVREGARPISGDTGLRDVQRLAEANDFPPVNDAARGSYRKITLRDAYIDHLT
+ GYIDLKNLTPLKLVFNAGNGAAGPVIDAIEARLKALGAPVEFIKIHNTPDGTFPNGIP
+ NPLLPECRDDTRKAVIEHGADMGIAFDGDFDRCFLFDEKGQFIEGYYIVGLLAEAFLE
+ KHPGAKIIHDPRLTWNTEDVVTAAGGTPVMSKTGHAFIKERMRHEDAIYGGEMSAHHY
+ FRDFAYCDSGMLPWLLVAELVCLKGQSLGELVADRMAAFPASGEINSRLAEPEEAIAR
+ VERHFADEALAVDRTDGLSMSFPDWRFNLRSSNTEPVVRLNVESRGDNILMESMTYLI
+ KSLLQ"
+ misc_feature 812504..813868
+ /locus_tag="SARI_00794"
+ /note="phosphomannomutase CpsG; Provisional; Region:
+ PRK15414"
+ /db_xref="CDD:185312"
+ misc_feature 812519..813865
+ /locus_tag="SARI_00794"
+ /note="The phosphomannomutase/phosphoglucomutase (PMM/PGM)
+ bifunctional enzyme catalyzes the reversible conversion of
+ 1-phospho to 6-phospho-sugars (e.g. between
+ mannose-1-phosphate and mannose-6-phosphate or
+ glucose-1-phosphate and glucose-6-phosphate) via a...;
+ Region: PMM_PGM; cd03089"
+ /db_xref="CDD:100091"
+ misc_feature order(812525..812527,812531..812533,812540..812542,
+ 812795..812803,812825..812827,813236..813238,
+ 813242..813244,813248..813253,813365..813367,
+ 813428..813436,813485..813487,813491..813493,
+ 813497..813499,813767..813769,813773..813781)
+ /locus_tag="SARI_00794"
+ /note="active site"
+ /db_xref="CDD:100091"
+ misc_feature order(812531..812533,812540..812542,812795..812797,
+ 813251..813253,813365..813367,813428..813430,
+ 813434..813436,813485..813487,813491..813493,
+ 813497..813499,813767..813769,813773..813781)
+ /locus_tag="SARI_00794"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:100091"
+ misc_feature order(812795..812797,813236..813238,813242..813244,
+ 813248..813250)
+ /locus_tag="SARI_00794"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:100091"
+ gene 813868..815154
+ /locus_tag="SARI_00795"
+ CDS 813868..815154
+ /locus_tag="SARI_00795"
+ /inference="similar to AA sequence:REFSEQ:YP_643347.1"
+ /note="'COG: COG2244 Membrane protein involved in the
+ export of O-antigen and teichoic acid;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569857.1"
+ /db_xref="GI:161502745"
+ /translation="MNLIINLNKKNMLNRYLQQSSSFFARIGVSLISMVLSVIIVRVY
+ DKSTVSAFFLFVSYTTFLTQVFLLGMTPFLNILAAKKVRSSSIYKEIIKKLYLSIPVT
+ IVVLWGLNETFEIEDIFLLFLATVISGLSSVLTELMKGNGSYVASQLYNGGVSTLLFI
+ ILLASNQLLGYDTDIIILYLASLFISSVMNYYQWRLSYNKVHVIDLSLKDKILFKKIL
+ PIYLSTVIVYLFSQVDLWVVSKNFDSSVVAQYGLAIRLAALLSFSTLSVRAIAASRIP
+ ILIQDKNLLQKEIYCSCNFSFVVSLLTLLSLLILGYWLIGMIFGVDYQYSWFILMIFA
+ VGQIVNAATGPCDFLLSHTGHGISLMWITFISFILLIASFVGIQFLEDKTVFLYCSAV
+ SLIIAVQNLSVVYIAFKKTGILALPYFKREYLRVEK"
+ misc_feature 813934..814974
+ /locus_tag="SARI_00795"
+ /note="Multidrug and toxic compound extrusion family and
+ similar proteins; Region: MATE_like; cl09326"
+ /db_xref="CDD:245055"
+ gene 815210..816361
+ /locus_tag="SARI_00796"
+ CDS 815210..816361
+ /locus_tag="SARI_00796"
+ /inference="similar to AA sequence:INSD:EAT62104.1"
+ /note="'KEGG: tma:TM0158 0.0040 prolipoprotein
+ diacylglyceryl transferase K00785;
+ COG: NOG22285 non supervised orthologous group;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569858.1"
+ /db_xref="GI:161502746"
+ /translation="MFQTLTQNNYPGELEEFTRSISTVEVILLSMLNIISFILCYFVF
+ LVLSSFRLKLNKNINVIFNKTKINKLFFFLLIAQIFFLVTTGVGKVTTSANEIATSIY
+ SPLFSFLKPEPFIYLFFLYFRMDKNFSYKGNILFTINIVLFIFFKILQGWTSFLLILF
+ FLEMYARYRLKNKKIILLLPLFIIFFGGWVYQYAFVLKNEIRGNDVAPLSYYQGVEQL
+ TSRLSMNPVSLGAYENYDTVVHLYQKENRVFKESGSLLRPILPAGFINKDFRILNNNV
+ MTSFYPDLNPYTSSDFGIVMYYSILFNSSLPDFILLTILTILLFIIAKIYFDSMSSYN
+ GQYDILLFFIIFYSFYTVSIENVFGQGFFPYIFSTLFFFLTGCIKFSRR"
+ gene 816435..817529
+ /locus_tag="SARI_00797"
+ CDS 816435..817529
+ /locus_tag="SARI_00797"
+ /inference="protein motif:HMMPfam:IPR001296"
+ /inference="similar to AA sequence:INSD:AAT85654.1"
+ /note="'KEGG: chy:CHY_1055 2.4e-06 glycosyl transferase,
+ group 1 family K00754;
+ COG: COG0438 Glycosyltransferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569859.1"
+ /db_xref="GI:161502747"
+ /db_xref="InterPro:IPR001296"
+ /translation="MFDEKKEYVIVSATALAASGALTILRQFIEQASINKNNFIIFVP
+ STLALPNYENITYVKTAPKGWLKRIYWDWIGCKKFIKRESLRVKKVICLQNSSMNVPY
+ PQIIYLHQPIPFSNIDFFFKEFNLNNFKLLLYKKFYAIFIFKFINKQSIFVVQTEWMK
+ SSLLNRCRNLNVKQVVVLRPDIKLFEARLDNKEISKNTLLYPATALSYKNHLVILKSL
+ TLLKKQFGINDIKFQVTFDKGQYKVFDRYVYENDLSTNIEYLGVISYIELQKKYLSAS
+ LVVFPSYIESYGLPLIEAAILGKRIICSDLPYARDVLNNYEGGIFVKYNDENNWANVI
+ YDVLTNKSCTQIRPYENDNCSSWPRFFDLI"
+ misc_feature 817020..817457
+ /locus_tag="SARI_00797"
+ /note="Glycosyl transferases group 1; Region:
+ Glycos_transf_1; pfam00534"
+ /db_xref="CDD:215979"
+ misc_feature <817020..817457
+ /locus_tag="SARI_00797"
+ /note="Glycosyltransferase [Cell envelope biogenesis,
+ outer membrane]; Region: RfaG; COG0438"
+ /db_xref="CDD:223515"
+ gene 817542..818573
+ /locus_tag="SARI_00798"
+ CDS 817542..818573
+ /locus_tag="SARI_00798"
+ /inference="protein motif:HMMPfam:IPR003869"
+ /inference="protein motif:HMMPfam:IPR013692"
+ /inference="similar to AA sequence:INSD:ABG81792.1"
+ /note="'KEGG: vfi:VF0191 8.9e-140
+ UDP-2-acetamido-2,6-dideoxy-alpha-D-xylo-4-hexulose
+ 3,5-epimerase K01726;
+ COG: COG1086 Predicted nucleoside-diphosphate sugar
+ epimerases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569860.1"
+ /db_xref="GI:161502748"
+ /db_xref="InterPro:IPR003869"
+ /db_xref="InterPro:IPR013692"
+ /translation="MFKNSTLLITGGTGSFGNAVLNRFLGTDIKEIRIFSRDEKKQDD
+ MRKKYTSDKLKFYIGDVRDYNSILAATRGVDFIYHAAALKQVPSCEFYPMEAVKTNII
+ GTDNVLEAAIANKVSRIVCLSTDKAVYPINAMGTSKAMMEKVIVAKSRNVPDGMVICA
+ TRYGNVMASRGSVIPLFINQILSGKPITITDPNMTRFMMSLDDAVDLVLHAFTHGSNG
+ DIFVQKSPAATIEILMQAILEIIKLPKHPINIIGTRHGEKLYEVLCSREEMLVAQDQG
+ NYYRIPCDNRDLNYEKYFEKGNKDVEKVEDYNSHNTYRLNKDEMIALLRKLAYINKIE
+ SGDKVDPDA"
+ misc_feature 817542..818549
+ /locus_tag="SARI_00798"
+ /note="UDP-N-acetylglucosamine
+ 4,6-dehydratase/5-epimerase; Region: FnlA; TIGR04130"
+ /db_xref="CDD:200381"
+ misc_feature 817548..818351
+ /locus_tag="SARI_00798"
+ /note="UDP-Glcnac (UDP-linked N-acetylglucosamine)
+ inverting 4,6-dehydratase, extended (e) SDRs; Region:
+ UDP_invert_4-6DH_SDR_e; cd05237"
+ /db_xref="CDD:187548"
+ misc_feature order(817572..817574,817578..817589,817647..817652,
+ 817716..817724,817779..817787,817791..817793,
+ 817836..817838,817905..817907,817953..817955,
+ 818028..818039,818046..818051)
+ /locus_tag="SARI_00798"
+ /note="NAD(P) binding site [chemical binding]; other site"
+ /db_xref="CDD:187548"
+ misc_feature order(817650..817652,817656..817658,817668..817670,
+ 817680..817682,817710..817721,817728..817730,
+ 817737..817739,817785..817796,817803..817805,
+ 817815..817817,817824..817826,817833..817835,
+ 818049..818054,818067..818069)
+ /locus_tag="SARI_00798"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:187548"
+ misc_feature order(817791..817793,817911..817919,817941..817943,
+ 818031..818036,818052..818060,818067..818072,
+ 818103..818111,818121..818123,818127..818129,
+ 818229..818231,818301..818303,818310..818312)
+ /locus_tag="SARI_00798"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:187548"
+ misc_feature order(817839..817841,817911..817913,817941..817943,
+ 817953..817955)
+ /locus_tag="SARI_00798"
+ /note="active site"
+ /db_xref="CDD:187548"
+ misc_feature 818391..818534
+ /locus_tag="SARI_00798"
+ /note="Polysaccharide biosynthesis protein C-terminal;
+ Region: Polysacc_syn_2C; pfam08485"
+ /db_xref="CDD:149510"
+ gene 818566..819441
+ /locus_tag="SARI_00799"
+ CDS 818566..819441
+ /locus_tag="SARI_00799"
+ /inference="protein motif:HMMPfam:IPR001509"
+ /inference="similar to AA sequence:INSD:ABG81793.1"
+ /note="'KEGG: rco:RC0456 8.6e-71 putative
+ dTDP-4-dehydrorhamnose reductase K00067;
+ COG: COG1091 dTDP-4-dehydrorhamnose reductase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569861.1"
+ /db_xref="GI:161502749"
+ /db_xref="InterPro:IPR001509"
+ /translation="MPKKILIIGANGMLGSSLLRFYSKLSEYDVLGTVRNDEAKLKVF
+ KQGFTNIISNVELSNLDIINKIIADFHPDYVFNCVGIIKQLNAAKDYLVSISVNSLLP
+ HQLAQICSRHNVKLIHFSTDCVFSGIHGSYCETDVPDASDLYGKSKQLGEIDYGGHLT
+ LRTSIIGHELSSNHSLIDWFLCQNQTVNGYSKAIFSGLPTVYLAEVIHKYILPNESCI
+ GLRHLSVAPINKYELLGLVKKQYCHDIKIIESTELVIDRSLDSSLFRKETNFVPLCWP
+ ELVEKMNNEYNEYFR"
+ misc_feature 818575..819426
+ /locus_tag="SARI_00799"
+ /note="dTDP-4-dehydrorhamnose reductase [Cell envelope
+ biogenesis, outer membrane]; Region: RfbD; COG1091"
+ /db_xref="CDD:224016"
+ misc_feature 818575..819369
+ /locus_tag="SARI_00799"
+ /note="dTDP-6-deoxy-L-lyxo-4-hexulose reductase and
+ related proteins, extended (e) SDRs; Region:
+ dTDP_HR_like_SDR_e; cd05254"
+ /db_xref="CDD:187564"
+ misc_feature order(818590..818592,818596..818607,818665..818670,
+ 818728..818739,818797..818805,818809..818811,
+ 818854..818856,818920..818928,818995..818997,
+ 819007..819009,819052..819063)
+ /locus_tag="SARI_00799"
+ /note="NADP binding site [chemical binding]; other site"
+ /db_xref="CDD:187564"
+ misc_feature order(818857..818859,818926..818928,818995..818997,
+ 819007..819009)
+ /locus_tag="SARI_00799"
+ /note="active site"
+ /db_xref="CDD:187564"
+ misc_feature order(818926..818928,818995..818997,819058..819060,
+ 819103..819105,819130..819132,819148..819150)
+ /locus_tag="SARI_00799"
+ /note="putative substrate binding site [chemical binding];
+ other site"
+ /db_xref="CDD:187564"
+ gene 819425..820570
+ /locus_tag="SARI_00800"
+ CDS 819425..820570
+ /locus_tag="SARI_00800"
+ /inference="protein motif:HMMPfam:IPR003331"
+ /inference="protein motif:HMMTigr:IPR003331"
+ /inference="similar to AA sequence:INSD:ABG81794.1"
+ /note="'KEGG: lic:LIC12139 1.1e-132 rffE;
+ UDP-N-acetylglucosamine 2-epimerase K01791;
+ COG: COG0381 UDP-N-acetylglucosamine 2-epimerase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569862.1"
+ /db_xref="GI:161502750"
+ /db_xref="InterPro:IPR003331"
+ /translation="MNILDKKLKVVTVVGTRPEIIRLSRVMSVLDQYTDHTIIHTGQN
+ YDYELNEVFFHELKIRKPDYFLNAAGCTAAETIGNVIIEADKIFEKITPEALLILGDT
+ NSALVAIAAKRRKIPIFHMEAGNRCFDYRVPEEINRKIVDHISDINLTYSEIAREYLL
+ HEGIPADQIIKTGSPMREVLNYYYDDIKKSSALEKLNLVADGYFLVSAHREENVDSPE
+ KLTSLIDILNSISEKYSLPVIVSTHPRTHNRMKNLNVTINNNISFMKPFGFFDYIFLQ
+ ENAHVVLSDSGTITEESSILNFPALNLRDVHERPEGFEEAAVMFVGLNSERIFQAIEI
+ LREQKRGQGERDLYLVSDYSIDNVSLKVLRIIMSYTNFVNHKIWKKA"
+ misc_feature 819440..820564
+ /locus_tag="SARI_00800"
+ /note="UDP-N-acetylglucosamine 2-epimerase [Cell envelope
+ biogenesis, outer membrane]; Region: WecB; COG0381"
+ /db_xref="CDD:223458"
+ misc_feature 819449..820522
+ /locus_tag="SARI_00800"
+ /note="Bacterial members of the UDP-N-Acetylglucosamine
+ (GlcNAc) 2-Epimerase family are known to catalyze the
+ reversible interconversion of UDP-GlcNAc and
+ UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to
+ produce an activated form of ManNAc residues; Region:
+ GT1_UDP-GlcNAc_2-Epimerase; cd03786"
+ /db_xref="CDD:99962"
+ misc_feature order(819473..819475,820223..820225,820229..820231,
+ 820238..820240,820286..820288,820298..820300)
+ /locus_tag="SARI_00800"
+ /note="active site"
+ /db_xref="CDD:99962"
+ misc_feature order(819647..819649,819653..819658,819677..819679,
+ 819758..819763,819767..819769,819773..819775,
+ 819824..819826,819836..819838,819905..819907)
+ /locus_tag="SARI_00800"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99962"
+ gene 820570..821766
+ /locus_tag="SARI_00801"
+ CDS 820570..821766
+ /locus_tag="SARI_00801"
+ /inference="protein motif:HMMPfam:IPR001296"
+ /inference="similar to AA sequence:INSD:ABG81795.1"
+ /note="'KEGG: bcz:BCZK4973 9.9e-23 wciJ; glycosyl
+ transferase, group 1; possible capsular polysaccharide
+ biosynthesis protein K00754;
+ COG: COG0438 Glycosyltransferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569863.1"
+ /db_xref="GI:161502751"
+ /db_xref="InterPro:IPR001296"
+ /translation="MRIVLICDDYLPDSTRVSAKMMHELACELLRQGHESIVICPNNG
+ TDVKKITHLKLDGVDIFKFPNGKVKDTFKFKRAINESLLSINAWRYLAAEIKNKKIDG
+ VVYYSPSIFFGPLVKRIKSYWHCKSYLILRDSFPQWLIDQGIIRSGGFTDKYFRLFEK
+ INYKSADCIGVMSHKNKELFLKHYPEFSNVCVLYNWTNLKNSTLTRPSEILKQQSLTE
+ KIIFFYGGNIGHAQDMSNLMRLALGMKELDNVHFLFIGQGDEVELVKNFIKIHSLKNC
+ TYLPSISQQEYLSLLRIVHVGLFSLAKNHTVHNFPGKLLGYMANKLPILGSVNAGNDL
+ KQIVEKAHSGYVHINGDDQSLLDSAVILANDIHIRKKMGENGYALLYERFSVEFAAEH
+ IVLQLQ"
+ misc_feature 820570..821748
+ /locus_tag="SARI_00801"
+ /note="Glycosyltransferase [Cell envelope biogenesis,
+ outer membrane]; Region: RfaG; COG0438"
+ /db_xref="CDD:223515"
+ misc_feature 820573..821751
+ /locus_tag="SARI_00801"
+ /note="This family is most closely related to the GT1
+ family of glycosyltransferases. wbuB in E. coli is
+ involved in the biosynthesis of the O26 O-antigen. It has
+ been proposed to function as an N-acetyl-L-fucosamine
+ (L-FucNAc) transferase; Region: GT1_wbuB_like; cd03794"
+ /db_xref="CDD:99968"
+ gene 821790..822287
+ /locus_tag="SARI_00802"
+ CDS 821790..822287
+ /locus_tag="SARI_00802"
+ /inference="protein motif:superfamily:IPR011051"
+ /inference="similar to AA sequence:INSD:ABG81796.1"
+ /note="'KEGG: pub:SAR11_0523 4.5e-10 glucose-6-phosphate
+ isomerase-like protein K01810;
+ COG: NOG13250 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569864.1"
+ /db_xref="GI:161502752"
+ /db_xref="InterPro:IPR011051"
+ /translation="MQVSLFTAKQMQELIDIAKKSERLRAHLSLHESHQDKVQMVLIA
+ LIKGTYIPPHFHKNIWQWEYFQIINGEVELYIFDENGKVRHIFQLGGKNGALFAKIEP
+ NTIHTLICRSSLAVVLEVKEGPFIELDAKVVPCWAFTESYKTISREKIIYKLENLRVG
+ QVYRI"
+ misc_feature 821802..822200
+ /locus_tag="SARI_00802"
+ /note="cupin fold metalloprotein, WbuC family; Region:
+ cupin_WbuC; TIGR04366"
+ /db_xref="CDD:213979"
+ gene 822471..823877
+ /locus_tag="SARI_00803"
+ CDS 822471..823877
+ /locus_tag="SARI_00803"
+ /inference="protein motif:Gene3D:IPR012283"
+ /inference="protein motif:Gene3D:IPR012284"
+ /inference="protein motif:HMMPfam:IPR006114"
+ /inference="protein motif:HMMPfam:IPR006115"
+ /inference="protein motif:HMMTigr:IPR006113"
+ /inference="protein motif:ScanRegExp:IPR006184"
+ /inference="protein motif:superfamily:IPR008927"
+ /inference="similar to AA sequence:REFSEQ:YP_217078.1"
+ /note="catalyzes the formation of D-ribulose 5-phosphate
+ from 6-phospho-D-gluconate"
+ /codon_start=1
+ /transl_table=11
+ /product="6-phosphogluconate dehydrogenase"
+ /protein_id="YP_001569865.1"
+ /db_xref="GI:161502753"
+ /db_xref="InterPro:IPR006113"
+ /db_xref="InterPro:IPR006114"
+ /db_xref="InterPro:IPR006115"
+ /db_xref="InterPro:IPR006184"
+ /db_xref="InterPro:IPR008927"
+ /db_xref="InterPro:IPR012283"
+ /db_xref="InterPro:IPR012284"
+ /translation="MSKQQIGVVGMAVMGRNLALNIESRGYTVSVFNRSREKTEEVIA
+ ENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGTDATIDSLKPYLEKGDIIIDGGN
+ TFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKDAYELVAPILTKIA
+ AVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLSNEELAST
+ FTEWNNGELSSYLIDITKDIFTKKDEDGNYLVDVILDEAANKGTGKWTSQSALDLGEP
+ LSLITESVFARYISSLKAQRVAASKVLSGPKAQPAGDKAEFIEKVRRALYLGKIVSYA
+ QGFSQLRAASEEYHWDLNYGEIAKIFRAGCIIRAQFLQKITDAYAENAGIANLLLAPY
+ FRKIADEYQQALRDVVAYAVQNGIPVPTFSAAVAYYDSYRAAVLPANLIQAQRDYFGA
+ HTYKRTDKDGIFHTEWLE"
+ misc_feature 822483..823382
+ /locus_tag="SARI_00803"
+ /note="6-phosphogluconate dehydrogenase-like protein;
+ Reviewed; Region: PRK09599"
+ /db_xref="CDD:236582"
+ misc_feature 822510..823874
+ /locus_tag="SARI_00803"
+ /note="6-phosphogluconate dehydrogenase; Validated;
+ Region: PRK09287"
+ /db_xref="CDD:236453"
+ misc_feature 823005..823868
+ /locus_tag="SARI_00803"
+ /note="6-phosphogluconate dehydrogenase, C-terminal
+ domain; Region: 6PGD; pfam00393"
+ /db_xref="CDD:215895"
+ gene 824113..825279
+ /locus_tag="SARI_00804"
+ CDS 824113..825279
+ /locus_tag="SARI_00804"
+ /inference="protein motif:HMMPanther:IPR001732"
+ /inference="protein motif:HMMPfam:IPR001732"
+ /inference="protein motif:superfamily:IPR008927"
+ /inference="similar to AA sequence:REFSEQ:YP_217077.1"
+ /note="'KEGG: sec:SC2090 1.6e-195 udg;
+ UDP-glucose/GDP-mannose dehydrogenase K00012;
+ COG: COG1004 Predicted UDP-glucose 6-dehydrogenase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569866.1"
+ /db_xref="GI:161502754"
+ /db_xref="InterPro:IPR001732"
+ /db_xref="InterPro:IPR008927"
+ /translation="MKITISGTGYVGLSNGLLIAQHHDVVALDIVPSRVELLNDRISP
+ IVDKEIQQFLKDDNIRFRATLDKFDAYQNADYVIIATPTDYDPKTNYFNTSSVESVIQ
+ DVVSINPAAVMIIKSTVPVGFTAAMRRQFATENIIFSPEFLREGKALYDNLYPSRIVI
+ GEQSDRAREFAALLQEGAIKQGIPTLFTDSSEAEAIKLFANTYLAMRVAYFNELDSYA
+ ETLGLNTRQIIEGVCLDPRIGNHYNNPSFGYGGYCLPKDTKQLLANYQSVPNNIISAI
+ VEANRTRKDFIADAILSRKPKVVGIFRLIMKSDSDNFRASSIQGIMKRIKAKGVEVII
+ YEPVMKEDTFFNTRLERDLRCFKQQADVIISNRMATELSDVAEKVYTRDLFGSD"
+ misc_feature 824113..825276
+ /locus_tag="SARI_00804"
+ /note="UDP-glucose 6-dehydrogenase; Provisional; Region:
+ PRK15057"
+ /db_xref="CDD:185017"
+ misc_feature 824116..>824361
+ /locus_tag="SARI_00804"
+ /note="NAD-dependent glycerol-3-phosphate dehydrogenase
+ N-terminus; Region: NAD_Gly3P_dh_N; pfam01210"
+ /db_xref="CDD:201664"
+ misc_feature 824683..824952
+ /locus_tag="SARI_00804"
+ /note="UDP-glucose/GDP-mannose dehydrogenase family,
+ central domain; Region: UDPG_MGDP_dh; pfam00984"
+ /db_xref="CDD:201536"
+ misc_feature 825010..825267
+ /locus_tag="SARI_00804"
+ /note="UDP binding domain; Region: UDPG_MGDP_dh_C;
+ smart00984"
+ /db_xref="CDD:214954"
+ gene 825425..826408
+ /locus_tag="SARI_00805"
+ CDS 825425..826408
+ /locus_tag="SARI_00805"
+ /inference="protein motif:HMMPfam:IPR003856"
+ /inference="similar to AA sequence:INSD:AAL20983.1"
+ /note="'KEGG: rsp:RSP_4084 1.3e-06 predicted
+ acetyltransferase K00903;
+ COG: COG3765 Chain length determinant protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569867.1"
+ /db_xref="GI:161502755"
+ /db_xref="InterPro:IPR003856"
+ /translation="MTVDNNTFSGRGNDPEQIDLIDLLLQLWRGKMTIIVAVIIAILL
+ AVGYLMIAKEKWTSTAILTQPDAGQVATYTNALNVLYGGNAPKISEVQTNFISRFSAA
+ FSALAEALDNQKVPEKLTIEQSVKGQALPLSVSYVSNTAEGAQRRLAEYIQQVDEEVA
+ KELEVDLKDNITLQTKTLQESLETQEVVAQEQKDLRIKQIEEALRYADEAKITQPQIQ
+ QTQDVTQDTMFLLGSDALKSMIQNEATRPLVFSPAYYQTKQTLLDIKNLKVTADTVHV
+ YRYVMKPTLPVRRDSPKKAITLVLAVLLGGMIGAGIVLGRNALRSYKPKAL"
+ misc_feature 825425..826399
+ /locus_tag="SARI_00805"
+ /note="chain length determinant protein WzzB; Provisional;
+ Region: PRK15471"
+ /db_xref="CDD:185368"
+ misc_feature 825506..825889
+ /locus_tag="SARI_00805"
+ /note="Chain length determinant protein; Region: Wzz;
+ cl15801"
+ /db_xref="CDD:247074"
+ misc_feature <826271..826378
+ /locus_tag="SARI_00805"
+ /note="G-rich domain on putative tyrosine kinase; Region:
+ GNVR; pfam13807"
+ /db_xref="CDD:222392"
+ gene complement(826493..827104)
+ /locus_tag="SARI_00806"
+ CDS complement(826493..827104)
+ /locus_tag="SARI_00806"
+ /inference="protein motif:BlastProDom:IPR002496"
+ /inference="protein motif:BlastProDom:IPR008179"
+ /inference="protein motif:HMMPfam:IPR002496"
+ /inference="protein motif:HMMPfam:IPR008179"
+ /inference="protein motif:ScanRegExp:IPR010916"
+ /inference="similar to AA sequence:REFSEQ:YP_150098.1"
+ /note="catalyzes the formation of 1-(5-phosphoribosyl)-AMP
+ from 1-(5-phosphoribosyl)-ATP and the subsequent formation
+ of
+ 1-(5-phosphoribosyl)-5-((5-
+ phosphoribosylamino)methylideneamino)imidazole-4-
+ carboxamide from 1-(5-phosphoribosyl)-AMP in histidine
+ biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="bifunctional phosphoribosyl-AMP
+ cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein"
+ /protein_id="YP_001569868.1"
+ /db_xref="GI:161502756"
+ /db_xref="InterPro:IPR002496"
+ /db_xref="InterPro:IPR008179"
+ /db_xref="InterPro:IPR010916"
+ /translation="MLTEQQRRELDWEKTDGMMPAIVQHAVSGEVLMLGYMNPQALDK
+ TIESGNVTFFSRTKQRLWTKGETSGHVLKVASIAPDCDNDTLLVLANPVGPTCHKGTS
+ SCFGDASHQWLFLYQLEQLLAERKTADPASSYTAKLYASGTKRIAQKVGEEGVETALA
+ ATVNDRVELTNEASDLMYHLLVLLQDQDLNLTTVINNLRKRHQ"
+ misc_feature complement(826775..827104)
+ /locus_tag="SARI_00806"
+ /note="Phosphoribosyl-AMP cyclohydrolase [Amino acid
+ transport and metabolism]; Region: HisI; COG0139"
+ /db_xref="CDD:223217"
+ misc_feature complement(826499..827098)
+ /locus_tag="SARI_00806"
+ /note="bifunctional phosphoribosyl-AMP
+ cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein;
+ Reviewed; Region: PRK02759"
+ /db_xref="CDD:235067"
+ misc_feature complement(<826568..826762)
+ /locus_tag="SARI_00806"
+ /note="Nucleoside Triphosphate Pyrophosphohydrolase (EC
+ 3.6.1.8) MazG-like domain found in Escherichia coli
+ phosphoribosyl-ATP pyrophosphohydrolase (HisIE or
+ PRATP-PH) and its homologs; Region: NTP-PPase_HisIE_like;
+ cd11534"
+ /db_xref="CDD:212141"
+ misc_feature complement(order(826580..826582,826589..826591,
+ 826637..826639,826646..826648))
+ /locus_tag="SARI_00806"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:212141"
+ gene complement(827098..827874)
+ /locus_tag="SARI_00807"
+ CDS complement(827098..827874)
+ /locus_tag="SARI_00807"
+ /inference="protein motif:HMMPfam:IPR006062"
+ /inference="protein motif:HMMTigr:IPR004651"
+ /inference="protein motif:superfamily:IPR011060"
+ /inference="similar to AA sequence:INSD:AAO68487.1"
+ /note="'catalyzes the conversion of
+ 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]-
+ 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine
+ to imidazole-glycerol phosphate,
+ 5-aminoimidazol-4-carboxamideribonucleotide and glutamate;
+ the HisF subunit acts as a cyclase'"
+ /codon_start=1
+ /transl_table=11
+ /product="imidazole glycerol phosphate synthase subunit
+ HisF"
+ /protein_id="YP_001569869.1"
+ /db_xref="GI:161502757"
+ /db_xref="InterPro:IPR004651"
+ /db_xref="InterPro:IPR006062"
+ /db_xref="InterPro:IPR011060"
+ /translation="MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYADEGA
+ DELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIRSIDDAAKILSFGADKISV
+ NSPALSDPTLITRLADRFGVQCIVVGIDTWFDDATGKYHVNQYTGDENRTRVTQWETL
+ DWVQEVQQRGAGEIVLNMMNQDGVRNGYDLTQLKKVRDVCRVPLIASGGAGTMEHFLE
+ AFRDADVDGALAASVFHKQIINIGELKAYLAGQGVEIRIC"
+ misc_feature complement(827122..827865)
+ /locus_tag="SARI_00807"
+ /note="The cyclase subunit of imidazoleglycerol phosphate
+ synthase (HisF). Imidazole glycerol phosphate synthase
+ (IGPS) catalyzes the fifth step of histidine biosynthesis,
+ the formation of the imidazole ring. IGPS converts
+ N1-(5'-phosphoribulosyl)...; Region: HisF; cd04731"
+ /db_xref="CDD:240082"
+ misc_feature complement(827155..827862)
+ /locus_tag="SARI_00807"
+ /note="Histidine biosynthesis protein; Region:
+ His_biosynth; pfam00977"
+ /db_xref="CDD:216225"
+ misc_feature complement(order(827179..827184,827248..827256,
+ 827326..827331,827344..827346,827425..827427,
+ 827470..827472,827491..827493,827563..827568,
+ 827629..827631,827725..827727,827818..827820))
+ /locus_tag="SARI_00807"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:240082"
+ misc_feature complement(order(827197..827199,827272..827274,
+ 827356..827358,827506..827508,827578..827583,
+ 827590..827592,827647..827649,827653..827655,
+ 827662..827664,827674..827676,827740..827742,
+ 827755..827757))
+ /locus_tag="SARI_00807"
+ /note="glutamase interaction surface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:240082"
+ gene complement(827856..828593)
+ /locus_tag="SARI_00808"
+ CDS complement(827856..828593)
+ /locus_tag="SARI_00808"
+ /inference="protein motif:HMMPfam:IPR006062"
+ /inference="protein motif:HMMTigr:IPR006063"
+ /inference="protein motif:superfamily:IPR011060"
+ /note="catalyzes the formation of
+ 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l-
+ (5-phosphoribosyl)imidazole-4-carboxamide from
+ 1-(5-phosphoribosyl)-5-[(5-
+ phosphoribosylamino)methylideneamino]
+ imidazole-4-carboxamide"
+ /codon_start=1
+ /transl_table=11
+ /product="1-(5-phosphoribosyl)-5-[(5-
+ phosphoribosylamino)methylideneamino]
+ imidazole-4-carboxamide isomerase"
+ /protein_id="YP_001569870.1"
+ /db_xref="GI:161502758"
+ /db_xref="InterPro:IPR006062"
+ /db_xref="InterPro:IPR006063"
+ /db_xref="InterPro:IPR011060"
+ /translation="MIIPALDLIDGVVVRLHQGDYARQRDYGNDPLPRLQDYVAQGAE
+ VLHLVDLTGAKDPANRQISLIKTLVAGVNVPVQIGGGVRTEEDVAALLEAGVARVVVG
+ STAVKSPEVVKGWFERFGAQALVLALDVRIDEHGNKQVAVSGWQENSGISLEQLVETY
+ LPVGLKHVLCTDISRDGTLAGSNVSLYQEVCARYPQIAFQSSGGIGDIDDIAALRGTG
+ VHGVIVGRALLEGKFTVKEAIQCWQNA"
+ misc_feature complement(827874..828593)
+ /locus_tag="SARI_00808"
+ /note="HisA. Phosphoribosylformimino-5-aminoimidazole
+ carboxamide ribonucleotide (ProFAR) isomerase catalyzes
+ the fourth step in histidine biosynthesis, an
+ isomerisation of the aminoaldose moiety of ProFAR to the
+ aminoketose of PRFAR (N-(5'-phospho-D-1...; Region:
+ HisA; cd04732"
+ /db_xref="CDD:240083"
+ misc_feature complement(827883..828590)
+ /locus_tag="SARI_00808"
+ /note="phosphoribosylformimino-5-aminoimidazole
+ carboxamide ribotide isomerase; Region: TIGR00007"
+ /db_xref="CDD:232779"
+ misc_feature complement(order(828207..828209,828453..828455,
+ 828573..828575))
+ /locus_tag="SARI_00808"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:240083"
+ gene complement(828593..829183)
+ /gene="hisH"
+ /locus_tag="SARI_00809"
+ CDS complement(828593..829183)
+ /gene="hisH"
+ /locus_tag="SARI_00809"
+ /inference="protein motif:HMMPfam:IPR000991"
+ /inference="protein motif:HMMTigr:IPR010139"
+ /inference="protein motif:ScanRegExp:IPR012998"
+ /inference="similar to AA sequence:INSD:AAV76789.1"
+ /note="'with HisF IGPS catalyzes the conversion of
+ phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide
+ ribonucleotide phosphate and glutamine to
+ imidazole-glycerol phosphate,
+ 5-aminoimidazol-4-carboxamide ribonucleotide, and
+ glutamate in histidine biosynthesis; the HisH subunit
+ provides the glutamine amidotransferase activity that
+ produces the ammonia necessary to HisF for the synthesis
+ of imidazole-glycerol phosphate and
+ 5-aminoimidazol-4-carboxamide ribonucleotide'"
+ /codon_start=1
+ /transl_table=11
+ /product="imidazole glycerol phosphate synthase subunit
+ HisH"
+ /protein_id="YP_001569871.1"
+ /db_xref="GI:161502759"
+ /db_xref="InterPro:IPR000991"
+ /db_xref="InterPro:IPR010139"
+ /db_xref="InterPro:IPR012998"
+ /translation="MNVVILDTGCANLSSVKSAVARHGYAPVVSREPEIVLRADKLFL
+ PGVGTAQAAMDQLRERELIDLIKACTQPVLGICLGMQLLGRRSEETHGVDLLNIIEQD
+ VPKMTDFGLPLPHMGWNRVYPQAGNRLFQGIEDGAYFYFVHSYAMPVNPWTIAQCHYG
+ EPFTAAVQKDNFFGVQFHPERSGAAGAQLLKNFLEM"
+ misc_feature complement(828596..829183)
+ /gene="hisH"
+ /locus_tag="SARI_00809"
+ /note="imidazole glycerol phosphate synthase subunit HisH;
+ Provisional; Region: hisH; PRK13170"
+ /db_xref="CDD:183877"
+ misc_feature complement(828602..829177)
+ /gene="hisH"
+ /locus_tag="SARI_00809"
+ /note="Type 1 glutamine amidotransferase (GATase1) domain
+ found in imidazole glycerol phosphate synthase (IGPS);
+ Region: GATase1_IGP_Synthase; cd01748"
+ /db_xref="CDD:153219"
+ misc_feature complement(order(828644..828646,828650..828652,
+ 828947..828961,829040..829063))
+ /gene="hisH"
+ /locus_tag="SARI_00809"
+ /note="putative active site [active]"
+ /db_xref="CDD:153219"
+ misc_feature complement(829040..829063)
+ /gene="hisH"
+ /locus_tag="SARI_00809"
+ /note="oxyanion strand; other site"
+ /db_xref="CDD:153219"
+ misc_feature complement(order(828644..828646,828650..828652,
+ 828953..828955))
+ /gene="hisH"
+ /locus_tag="SARI_00809"
+ /note="catalytic triad [active]"
+ /db_xref="CDD:153219"
+ gene complement(829183..830250)
+ /locus_tag="SARI_00810"
+ CDS complement(829183..830250)
+ /locus_tag="SARI_00810"
+ /inference="protein motif:BlastProDom:IPR000807"
+ /inference="protein motif:HMMPfam:IPR000807"
+ /inference="protein motif:HMMTigr:IPR005954"
+ /inference="protein motif:HMMTigr:IPR006543"
+ /inference="protein motif:HMMTigr:IPR006549"
+ /inference="protein motif:ScanRegExp:IPR000807"
+ /inference="similar to AA sequence:SwissProt:Q5PDP5"
+ /note="catalyzes the formation of
+ 3-(imidazol-4-yl)-2-oxopropyl phosphate from
+ D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and
+ histidinol from histidinol phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="imidazole glycerol-phosphate
+ dehydratase/histidinol phosphatase"
+ /protein_id="YP_001569872.1"
+ /db_xref="GI:161502760"
+ /db_xref="InterPro:IPR000807"
+ /db_xref="InterPro:IPR005954"
+ /db_xref="InterPro:IPR006543"
+ /db_xref="InterPro:IPR006549"
+ /translation="MSQKYLFIDRDGTLISEPPSDFQVDSFYKLAFEPEVIPVLLTLQ
+ KAGFKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGIHFDDVLICPHLPAEDCD
+ CRKPKVKLVERYLAEHAMDSANSYVIGDRATDIQLADNMGITGLRYHRETLNWSMIGK
+ QLTKRDRYVHVARNTKETQIDVSVWLDREGNSKINTGVGFFDHMLDQIATHGGFRMEI
+ TVKGDLYIDDHHTVEDTGLALGEALKLALGDKRGICRFGFVLPMDECLARCALDISGR
+ PHLEYKAEFTYQRVGDLSTEMIEHFFRSLSYTMGVTLHLKTKGKNDHHRVESLFKAFG
+ RTLRQAIRVEGDTLPSSKGVL"
+ misc_feature complement(829186..830247)
+ /locus_tag="SARI_00810"
+ /note="imidazole glycerol-phosphate dehydratase/histidinol
+ phosphatase; Provisional; Region: PRK05446"
+ /db_xref="CDD:235471"
+ misc_feature complement(829813..830235)
+ /locus_tag="SARI_00810"
+ /note="Haloacid dehalogenase-like hydrolases. The haloacid
+ dehalogenase-like (HAD) superfamily includes L-2-haloacid
+ dehalogenase, epoxide hydrolase, phosphoserine
+ phosphatase, phosphomannomutase, phosphoglycolate
+ phosphatase, P-type ATPase, and many others; Region:
+ HAD_like; cd01427"
+ /db_xref="CDD:119389"
+ misc_feature complement(order(830086..830091,830218..830226))
+ /locus_tag="SARI_00810"
+ /note="active site"
+ /db_xref="CDD:119389"
+ misc_feature complement(830209..830226)
+ /locus_tag="SARI_00810"
+ /note="motif I; other site"
+ /db_xref="CDD:119389"
+ misc_feature complement(830089..830091)
+ /locus_tag="SARI_00810"
+ /note="motif II; other site"
+ /db_xref="CDD:119389"
+ misc_feature complement(829186..829746)
+ /locus_tag="SARI_00810"
+ /note="Imidazoleglycerol-phosphate dehydratase; Region:
+ IGPD; cd07914"
+ /db_xref="CDD:153419"
+ misc_feature complement(order(829270..829272,829279..829284,
+ 829351..829353,829423..829425,829462..829467,
+ 829486..829488,829552..829554,829561..829566,
+ 829618..829623,829630..829632,829642..829644,
+ 829720..829722))
+ /locus_tag="SARI_00810"
+ /note="putative active site pocket [active]"
+ /db_xref="CDD:153419"
+ misc_feature complement(order(829279..829293,829351..829356,
+ 829363..829365,829369..829371,829378..829392,
+ 829561..829566,829570..829578,829642..829644,
+ 829651..829656))
+ /locus_tag="SARI_00810"
+ /note="4-fold oligomerization interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:153419"
+ misc_feature complement(order(829270..829272,829279..829284,
+ 829351..829353,829552..829554,829561..829566,
+ 829642..829644))
+ /locus_tag="SARI_00810"
+ /note="metal binding residues [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:153419"
+ misc_feature complement(order(829219..829221,829237..829239,
+ 829246..829248,829303..829305,829309..829311,
+ 829315..829317,829417..829419,829423..829425,
+ 829435..829443,829453..829458,829462..829470,
+ 829474..829479,829483..829485,829489..829491))
+ /locus_tag="SARI_00810"
+ /note="3-fold/trimer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:153419"
+ gene complement(830247..831326)
+ /locus_tag="SARI_00811"
+ CDS complement(830247..831326)
+ /locus_tag="SARI_00811"
+ /inference="protein motif:HMMPfam:IPR004839"
+ /inference="protein motif:HMMTigr:IPR005861"
+ /inference="protein motif:ScanRegExp:IPR001917"
+ /inference="similar to AA sequence:SwissProt:Q57MS2"
+ /note="catalyzes the formation of L-histidinol phosphate
+ from imidazole-acetol phosphate and glutamate in histidine
+ biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="histidinol-phosphate aminotransferase"
+ /protein_id="YP_001569873.1"
+ /db_xref="GI:161502761"
+ /db_xref="InterPro:IPR001917"
+ /db_xref="InterPro:IPR004839"
+ /db_xref="InterPro:IPR005861"
+ /translation="MSTENTLSVADLARENVRNLIPYQSARRLGGNGDVWLNANEFPT
+ AVEFQLTQQTLNRYPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELMIRAFCEPG
+ KDAILYCPPTYGMYSVSAETIGVARRTVPTLENWQLDLQGIYDNLDGAKVVFVCSPNN
+ PTGQLINPQDLRTLLELTRGKAMVVADEAYIEFCPQATLAGWLVEYPHLVILRTLSKA
+ FALAGLRCGFTLANEEVINLLLKVIAPYPLSTPVADIAAQALSPRGINAMRERVRLIV
+ QERQHLVNGLQQAACLEHVFDSETNYILARFTASSSVFKSLWDQGIILRDQNKQPSLS
+ GCLRITVGTRQENQRVIDALRAEPV"
+ misc_feature complement(830262..831314)
+ /locus_tag="SARI_00811"
+ /note="histidinol-phosphate aminotransferase; Provisional;
+ Region: PRK01688"
+ /db_xref="CDD:234972"
+ misc_feature complement(830259..831227)
+ /locus_tag="SARI_00811"
+ /note="Aspartate aminotransferase family. This family
+ belongs to pyridoxal phosphate (PLP)-dependent aspartate
+ aminotransferase superfamily (fold I). Pyridoxal phosphate
+ combines with an alpha-amino acid to form a compound
+ called a Schiff base or aldimine...; Region: AAT_like;
+ cd00609"
+ /db_xref="CDD:99734"
+ misc_feature complement(order(830652..830654,830676..830681,
+ 830685..830687,830757..830759,830847..830849,
+ 830988..830990,831063..831071))
+ /locus_tag="SARI_00811"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:99734"
+ misc_feature complement(order(830562..830564,830571..830573,
+ 830652..830660,830778..830780,830958..830960,
+ 831060..831062))
+ /locus_tag="SARI_00811"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99734"
+ misc_feature complement(830676..830678)
+ /locus_tag="SARI_00811"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:99734"
+ gene complement(831323..832627)
+ /gene="hisD"
+ /locus_tag="SARI_00812"
+ CDS complement(831323..832627)
+ /gene="hisD"
+ /locus_tag="SARI_00812"
+ /inference="protein motif:BlastProDom:IPR001692"
+ /inference="protein motif:HMMPanther:IPR012131"
+ /inference="protein motif:HMMPfam:IPR001692"
+ /inference="protein motif:HMMPIR:IPR012131"
+ /inference="protein motif:HMMTigr:IPR001692"
+ /inference="protein motif:ScanRegExp:IPR001692"
+ /inference="similar to AA sequence:INSD:AAL20976.1"
+ /note="catalyzes the oxidation of L-histidinol to
+ L-histidinaldehyde and then to L-histidine in histidine
+ biosynthesis; functions as a dimer"
+ /codon_start=1
+ /transl_table=11
+ /product="histidinol dehydrogenase"
+ /protein_id="YP_001569874.1"
+ /db_xref="GI:161502762"
+ /db_xref="InterPro:IPR001692"
+ /db_xref="InterPro:IPR012131"
+ /translation="MGFNTLIDWNNCNPEQQRELLTRPAISASDSITRTVSDILDNVK
+ TRGDDALREYGAKFDKTEVTSLRVTAEEIAAAGARLSEELKQAMAAAVKNIETFHSAQ
+ TLPPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVLMLATPARIAGCQKVVLC
+ SPPPIADEILYAAQLCGVQEIFNVGGSQAIAALAFGSESVPKVDKIFGPGNAFVTEAK
+ RQVSQRLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEHGPDSQVILLTPDAD
+ IARKVAEAVERQLAELPRAETARQALRASRLIVTKDLAQCVAISNQYGPEHLIIQTRN
+ ARDLVDAITSAGSVFLGDWSPESAGDYASGTNHVLPTYGYTATCSSLGLADFQKRMTV
+ QELSKAGFSALAPTIETLAAAERLTAHKNAVTLRVNVLKEQA"
+ misc_feature complement(831335..832603)
+ /gene="hisD"
+ /locus_tag="SARI_00812"
+ /note="Histidinol dehydrogenase [Amino acid transport and
+ metabolism]; Region: HisD; COG0141"
+ /db_xref="CDD:223219"
+ misc_feature complement(831371..832534)
+ /gene="hisD"
+ /locus_tag="SARI_00812"
+ /note="Histidinol dehydrogenase, HisD, E.C 1.1.1.23.
+ Histidinol dehydrogenase catalyzes the last two steps in
+ the L-histidine biosynthesis pathway, which is conserved
+ in bacteria, archaea, fungi, and plants. These last two
+ steps are (i) the NAD-dependent...; Region: Histidinol_dh;
+ cd06572"
+ /db_xref="CDD:119329"
+ misc_feature complement(order(831842..831844,831986..831991,
+ 831995..832003,832064..832066,832070..832075,
+ 832142..832144,832205..832207,832229..832234,
+ 832238..832240,832454..832456))
+ /gene="hisD"
+ /locus_tag="SARI_00812"
+ /note="NAD binding site [chemical binding]; other site"
+ /db_xref="CDD:119329"
+ misc_feature complement(order(831371..831391,831395..831400,
+ 831443..831466,831473..831478,831482..831496,
+ 831500..831505,831533..831535,831539..831541,
+ 831545..831559,831563..831568,831572..831574,
+ 831578..831604,831608..831613,831620..831622,
+ 831635..831637,831842..831847,831851..831859,
+ 831863..831868,831875..831880,831959..831961,
+ 831971..831973,832016..832018,832208..832222,
+ 832256..832258,832262..832264,832271..832285,
+ 832295..832297,832301..832303,832322..832327,
+ 832334..832339,832346..832351,832358..832360,
+ 832364..832369,832376..832381))
+ /gene="hisD"
+ /locus_tag="SARI_00812"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:119329"
+ misc_feature complement(order(831371..831373,831380..831382,
+ 831386..831388,831527..831529,831545..831550,
+ 831560..831562,831647..831652,831842..831844,
+ 831917..831919,832208..832210,832214..832216))
+ /gene="hisD"
+ /locus_tag="SARI_00812"
+ /note="product binding site; other site"
+ /db_xref="CDD:119329"
+ misc_feature complement(order(831371..831373,831380..831382,
+ 831386..831388,831527..831529,831545..831550,
+ 831560..831562,831647..831652,831842..831844,
+ 831851..831853,831917..831919,832208..832210))
+ /gene="hisD"
+ /locus_tag="SARI_00812"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:119329"
+ misc_feature complement(order(831371..831373,831548..831550,
+ 831842..831844,831851..831853))
+ /gene="hisD"
+ /locus_tag="SARI_00812"
+ /note="zinc binding site [ion binding]; other site"
+ /db_xref="CDD:119329"
+ misc_feature complement(831647..831652)
+ /gene="hisD"
+ /locus_tag="SARI_00812"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:119329"
+ gene complement(832633..833580)
+ /gene="hisG"
+ /locus_tag="SARI_00813"
+ CDS complement(832633..833580)
+ /gene="hisG"
+ /locus_tag="SARI_00813"
+ /inference="protein motif:BlastProDom:IPR013820"
+ /inference="protein motif:HMMPfam:IPR013115"
+ /inference="protein motif:HMMPfam:IPR013820"
+ /inference="protein motif:HMMTigr:IPR001348"
+ /inference="protein motif:ScanRegExp:IPR013820"
+ /inference="similar to AA sequence:INSD:AAV76793.1"
+ /note="long form of enzyme; catalyzes the formation of
+ N'-5'-phosphoribosyl-ATP from phosphoribosyl
+ pyrophosphate; crucial role in histidine biosynthesis;
+ forms active dimers and inactive hexamers which is
+ dependent on concentration of substrates and inhibitors"
+ /codon_start=1
+ /transl_table=11
+ /product="ATP phosphoribosyltransferase"
+ /protein_id="YP_001569875.1"
+ /db_xref="GI:161502763"
+ /db_xref="InterPro:IPR001348"
+ /db_xref="InterPro:IPR013115"
+ /db_xref="InterPro:IPR013820"
+ /translation="MARDTDRFRQDKEEHKMLDNTRLRIAIQKSGRLSDDSRELLARC
+ GIKINLHTQRLIAMAENMPIDILRVRDDDIPGLVMDGVVDLGIIGENVLEEELLNRRA
+ QGEDPRYFTLRRLDFGGCRLSLATPVDEAWEGPVALEGKRIATSYPHLLKRYLDQKGV
+ SFKSCLLNGSVEVAPRAGLADAICDLVSTGATLEANGLREVEVIYRSKACLIQRDGEI
+ AESKQQLIDKLLTRIQGVIQARESKYIMMHAPSERLEEVIALLPGAERPTILPLAGEQ
+ QRVAMHMVSSETLFWETMEKLKALGASSILVLPIEKMME"
+ misc_feature complement(832636..833526)
+ /gene="hisG"
+ /locus_tag="SARI_00813"
+ /note="ATP phosphoribosyltransferase; Reviewed; Region:
+ hisG; PRK00489"
+ /db_xref="CDD:234781"
+ misc_feature complement(832942..833514)
+ /gene="hisG"
+ /locus_tag="SARI_00813"
+ /note="ATP phosphoribosyltransferase; Region: hisG;
+ TIGR00070"
+ /db_xref="CDD:232809"
+ misc_feature complement(832639..832941)
+ /gene="hisG"
+ /locus_tag="SARI_00813"
+ /note="ATP phosphoribosyltransferase, C-terminal domain;
+ Region: HisG_C-term; TIGR03455"
+ /db_xref="CDD:132496"
+ misc_feature complement(833579..833702)
+ /inference="nucleotide motif:Rfam:RF00514"
+ /note="histidine operon leader"
+ gene 833891..834715
+ /locus_tag="SARI_00814"
+ CDS 833891..834715
+ /locus_tag="SARI_00814"
+ /inference="protein motif:HMMPfam:IPR006115"
+ /inference="similar to AA sequence:INSD:CAD02431.1"
+ /note="'KEGG: mth:MTH1789 1.2e-07 dTDP-glucose
+ 4,6-dehydratase K01710;
+ COG: COG0451 Nucleoside-diphosphate-sugar epimerases;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569876.1"
+ /db_xref="GI:161502764"
+ /db_xref="InterPro:IPR006115"
+ /translation="MKKVAIVGLGWLGMPLAMSLAARGWQVTGSKTTLDGVEAARMSG
+ IESYPLRLEPELVCEADDLDALLDVDALVITLPARRSGPGEDFYLQAMQELVDSALAY
+ RIPRIIFTSSTSVYGDVQGVVKENTPRNPVTASGRTLKELEDWLHNLPGTSVDILRLA
+ GLVGPGRHPGRFFAGKTAPDGQHGVNLVHLEDVVCAITLLLQAPKGGHIYNICAPAHP
+ ARNVFYPQMARLLGMEPPHFRDAPDNGKGKVIDGSRICNELGFEYQYPDPLVMPME"
+ misc_feature 833894..834688
+ /locus_tag="SARI_00814"
+ /note="Nucleoside-diphosphate-sugar epimerases [Cell
+ envelope biogenesis, outer membrane / Carbohydrate
+ transport and metabolism]; Region: WcaG; COG0451"
+ /db_xref="CDD:223528"
+ misc_feature 833900..834667
+ /locus_tag="SARI_00814"
+ /note="atypical (a) SDRs, subgroup 4; Region: SDR_a4;
+ cd05266"
+ /db_xref="CDD:187576"
+ misc_feature order(833912..833914,833918..833926,833981..833989,
+ 834107..834115,834218..834226,834293..834295,
+ 834305..834307,834365..834376)
+ /locus_tag="SARI_00814"
+ /note="putative NAD(P) binding site [chemical binding];
+ other site"
+ /db_xref="CDD:187576"
+ unsure 834041..834484
+ /locus_tag="SARI_00814"
+ /note="Sequence derived from one plasmid subclone"
+ gene 834806..835676
+ /locus_tag="SARI_00815"
+ /note="Pseudogene compared to gi|16765399|ref|NP_461014.1|
+ putative transcriptional regulator [Salmonella typhimurium
+ LT2]"
+ unsure 835018..835229
+ /note="Sequence derived from one plasmid subclone"
+ gene 835765..835962
+ /locus_tag="SARI_00816"
+ CDS 835765..835962
+ /locus_tag="SARI_00816"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569877.1"
+ /db_xref="GI:161502765"
+ /translation="MQKMTLTDVLIRVGYFFASNTSFNTKRPGFVPDRYLLKNRQLLS
+ LRNPENGAIFCLRDGIRRKGE"
+ misc_feature 835855..>835944
+ /locus_tag="SARI_00816"
+ /note="Class II tRNA amino-acyl synthetase-like catalytic
+ core domain. Class II amino acyl-tRNA synthetases (aaRS)
+ share a common fold and generally attach an amino acid to
+ the 3' OH of ribose of the appropriate tRNA. PheRS
+ is an exception in that it...; Region:
+ class_II_aaRS-like_core; cl00268"
+ /db_xref="CDD:241739"
+ gene 835965..837323
+ /locus_tag="SARI_00817"
+ CDS 835965..837323
+ /locus_tag="SARI_00817"
+ /inference="protein motif:HMMPanther:IPR002293"
+ /inference="protein motif:HMMPfam:IPR004841"
+ /inference="similar to AA sequence:REFSEQ:YP_150108.1"
+ /note="'KEGG: eci:UTI89_C0120 9.2e-15 aroP; aromatic amino
+ acid transport protein AroP K03293;
+ COG: COG0531 Amino acid transporters;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="low-affinity putrescine importer PlaP"
+ /protein_id="YP_001569878.2"
+ /db_xref="GI:448236207"
+ /db_xref="InterPro:IPR002293"
+ /db_xref="InterPro:IPR004841"
+ /translation="MSHNVTPNTSRVELRKTLTLVPVVMMGLAYMQPMTLFDTFGIVS
+ GLTDGHVPTAYAFALIAILFTALSYGKLVRRYPSAGSAYTYAQKSISPTVGFMVGWSS
+ LLDYLFAPMINILLAKIYFEALVPSIPSWVFVVALVAFMTAFNLRSLKSVANFNTVIV
+ VLQVVLIAVILGMVVYGVFEGEGAGTLASTRPFWSGDAHVIPMITGATILCFSFTGFD
+ GISNLSEETKDAERVIPRAIFLTALIGGLIFIFATYFLQLYFPDISRFKDPDASQPEI
+ MLYVAGKAFQVGALIFSTITVLASGMAAHAGVARLMYVMGRDGVFPKSFFGYVHPKWR
+ TPAMNIILVGAIALLAINFDLVMATALINFGALVAFTFVNLSVISQFWIREKRNKTLK
+ DHFQYLFLPMCGALTVGALWVNLEESSMVLGLIWAGIGLIYLACVTKSFRNPVPQYED
+ VA"
+ misc_feature 835980..837290
+ /locus_tag="SARI_00817"
+ /note="Amino acid transporters [Amino acid transport and
+ metabolism]; Region: PotE; COG0531"
+ /db_xref="CDD:223605"
+ gene complement(837458..838888)
+ /gene="sbcB"
+ /locus_tag="SARI_00818"
+ CDS complement(837458..838888)
+ /gene="sbcB"
+ /locus_tag="SARI_00818"
+ /inference="protein motif:HMMPfam:IPR013520"
+ /inference="protein motif:HMMPfam:IPR013620"
+ /inference="protein motif:HMMSmart:IPR006055"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:INSD:AAV76797.1"
+ /note="Exonucleolytic cleavage in the 3'- to 5'-direction
+ to yield nucleoside 5'-phosphates"
+ /codon_start=1
+ /transl_table=11
+ /product="exonuclease I"
+ /protein_id="YP_001569879.1"
+ /db_xref="GI:161502767"
+ /db_xref="InterPro:IPR006055"
+ /db_xref="InterPro:IPR012337"
+ /db_xref="InterPro:IPR013520"
+ /db_xref="InterPro:IPR013620"
+ /translation="MTVKNDSIQSTFLFHDYETFGTHPALDRPAQFAAIRTDNDFNIV
+ GEPDVFYCKPADDYLPQPGAVLITGITPQEACEKGENEAAFARRIHALFTVPKTCVVG
+ YNNVRFDDEVTRNIFYRNFYDPYAWSWQHENSRWDILDVMRACYALRPEGINWPENDD
+ GLPSFRLEHLTQANDIEHSNAHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKL
+ AALIDVPQMKPLVHISGMFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELD
+ SDTLRDRLYTAKADLGNNAAVPVKLVHINKCPVLAQANTLRPEDADRLGINRQHCLDN
+ LKVLRENPQVRDKVVAIFAEAEPFSSPDNVDAQLYDGFFSDSDRAAMKIVLETEPRNL
+ PALDITFVDKRIEKLLFNYRARNFPGTLDDAEQQRWLAHRRQVLTPEFLQQYANELQM
+ LSQQYAEDKTKLGLLKSLWQYATEIV"
+ misc_feature complement(837461..838876)
+ /gene="sbcB"
+ /locus_tag="SARI_00818"
+ /note="exonuclease I; Provisional; Region: sbcB; PRK11779"
+ /db_xref="CDD:236979"
+ misc_feature complement(838301..838852)
+ /gene="sbcB"
+ /locus_tag="SARI_00818"
+ /note="N-terminal DEDDh 3'-5' exonuclease domain
+ of Escherichia coli exonuclease I and similar proteins;
+ Region: ExoI_N; cd06138"
+ /db_xref="CDD:99841"
+ misc_feature complement(order(838328..838330,838343..838345,
+ 838562..838570,838577..838582,838685..838690,
+ 838823..838828,838832..838843))
+ /gene="sbcB"
+ /locus_tag="SARI_00818"
+ /note="active site"
+ /db_xref="CDD:99841"
+ misc_feature complement(order(838328..838330,838343..838345,
+ 838562..838564,838835..838837,838841..838843))
+ /gene="sbcB"
+ /locus_tag="SARI_00818"
+ /note="catalytic site [active]"
+ /db_xref="CDD:99841"
+ misc_feature complement(order(838328..838330,838343..838345,
+ 838565..838570,838577..838582,838826..838828,
+ 838832..838843))
+ /gene="sbcB"
+ /locus_tag="SARI_00818"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:99841"
+ misc_feature complement(837464..838252)
+ /gene="sbcB"
+ /locus_tag="SARI_00818"
+ /note="Exonuclease C-terminal; Region: Exonuc_X-T_C;
+ pfam08411"
+ /db_xref="CDD:219829"
+ gene 839123..839272
+ /locus_tag="SARI_00819"
+ CDS 839123..839272
+ /locus_tag="SARI_00819"
+ /note="'COG: COG5295 Autotransporter adhesin;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569880.1"
+ /db_xref="GI:161502768"
+ /translation="MRDSPALTGTPTPETTAAGRDIATTAFVAAKVVPLVGFAPDALK
+ PMASR"
+ gene complement(839302..840804)
+ /locus_tag="SARI_00820"
+ CDS complement(839302..840804)
+ /locus_tag="SARI_00820"
+ /inference="protein motif:ScanRegExp:IPR002086"
+ /inference="similar to AA sequence:INSD:AAO49625.1"
+ /note="'COG: NOG12779 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569881.1"
+ /db_xref="GI:161502769"
+ /db_xref="InterPro:IPR002086"
+ /translation="MKKFYHFRDYQRAKLESHAFYKLIDSDIIPLKNKLMFAPVMAHF
+ VMNFRDMNKWVIRFATTDSKFKSVINAGTTEDETHSRLFLEDWRKLYLDDKLNWKASD
+ IIYWLFISPEMECFRKYGVEFMRLCVDDNNDPILRYSHSESGETCGNVFFSKISPIAD
+ EVAHELGVQLRYFGSFHLGLENGHVWKSEGVFENEVLLPEYYDKVRNLSQRMFDIFTG
+ IHDAFYHYTLKYIVKHEVHNFSNPVKTEGKILTTPSEINITQTQKNNEEIIHYVDSYL
+ REIDEHPFFDWVKSSTINAELKIKCFIPLWIVDIMMYRDINNYIFTYMCPGSMGELLI
+ NDYARHLACHSALFYNDWKALKLDDMLRWSASDTLEFIFLNTDMDSHRKNLVNFSLHG
+ MKNKDPLIRFWFMMILELSGKSFFSVIGQVAMQAESECNISLPYLTGKHSSAEEQKSY
+ CALYEYFINQDISKEQVKTIKYLSDIVMRSLLENLDISYKYALNNIFAAR"
+ gene complement(841095..841625)
+ /locus_tag="SARI_00821"
+ CDS complement(841095..841625)
+ /locus_tag="SARI_00821"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569882.1"
+ /db_xref="GI:161502770"
+ /translation="MLFGKHQKKGLELIRKTFKENISNLCKELRLLDNEEKAFLVSIL
+ TIKLRAPHTSDANLINSNGTFDIYSKQLLINNKIPFPERSLIDDIYFYLMTIFSLPWK
+ QEKCMRRPRFGSKVHAVDIHQPVFEQVSCINLYDQHFPASPDAGKHIDGLSQEAVEIL
+ KKQDTSKYDFIFLEKI"
+ gene 842557..844833
+ /locus_tag="SARI_00822"
+ CDS 842557..844833
+ /locus_tag="SARI_00822"
+ /inference="protein motif:HMMPfam:IPR006656"
+ /inference="protein motif:HMMPfam:IPR006657"
+ /inference="protein motif:HMMPfam:IPR006963"
+ /inference="protein motif:ScanRegExp:IPR006655"
+ /inference="protein motif:superfamily:IPR009010"
+ /note="'KEGG: stm:STM2065 0. phsA; Hydrogen sulfide
+ production: membrane anchoring protein K08352;
+ COG: COG0243 Anaerobic dehydrogenases, typically
+ selenocysteine-containing;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="thiosulfate reductase"
+ /protein_id="YP_001569883.2"
+ /db_xref="GI:448236208"
+ /db_xref="InterPro:IPR006655"
+ /db_xref="InterPro:IPR006656"
+ /db_xref="InterPro:IPR006657"
+ /db_xref="InterPro:IPR006963"
+ /db_xref="InterPro:IPR009010"
+ /translation="MSISRRSFLQGVGIGCSACALGAFPPGALARNPVAGINGKTTLT
+ PSLCEMCSFRCPVQAQVVNNKTVFIQGNPFAPQQGTRVCARGGSGVSLVNDPQRIVKP
+ MKRNGPRGGGEWQVISWQQAYQEIAAKMNAIKAQHGPESVVFSSKSGSLSSHLFHLAT
+ AFGSPNTFTHASTCPAGKAIAAKVMMGGDLAMDIANTRYLVSFGHNLYEGIEVADTHE
+ LMTAQVKGAKMVSFDPRLSIFSSKADEWHAIRPGGDLAVLLAMCHVMIDEQLYDASFV
+ ERYTTGFEQLAQTVKEATPEWAEAQADVPADAIARVTRELAACAPHAIVSPGHRATFS
+ QEEIDMRRMIFTLNVLLGNIEREGGLYQKKGASVYNKLAGERVAPTLAKPNIKNMPKP
+ TAQRIDLVAPQFKYIAAGGGVVQSIIDAALTQKPYPIKAWIMSRHNPFQTVTCRPDLV
+ KTVEQLELVVSCDVYLSESAAHADYLLPECTYLERDEEVSDMSGLQPAYALRQQVVEP
+ IGEARPSWQIWKELGEQLGLGQYYPWQDMQTRQLYQLNGDHALAKELRQKGYLEWGVP
+ LLLREPESVRQFTARYPGAIATDSDNTYGEQLRFKSPSGKIELYSETLEGLLPGYGVP
+ RVRDFALKKENELYFIQGKVAVHTNGATQYVPLLSELMWDNAVWVHPQTAREKGIKTG
+ DEIWLENATGKEKGKALVTPGIRPDTLFVYMGFGAKAGAKTAATTHGIHCGNLLPHVT
+ SPVSGTVVHTAGVTLSRA"
+ misc_feature 842557..844830
+ /locus_tag="SARI_00822"
+ /note="thiosulfate reductase PhsA; Provisional; Region:
+ PRK15488"
+ /db_xref="CDD:237973"
+ misc_feature 842686..844140
+ /locus_tag="SARI_00822"
+ /note="The MopB_Thiosulfate-R-like CD contains
+ thiosulfate-, sulfur-, and polysulfide-reductases, and
+ other related proteins. Thiosulfate reductase catalyzes
+ the cleavage of sulfur-sulfur bonds in thiosulfate.
+ Polysulfide reductase is a membrane-bound enzyme...;
+ Region: MopB_Thiosulfate-R-like; cd02755"
+ /db_xref="CDD:239156"
+ misc_feature order(842698..842700,842707..842709,842719..842721,
+ 842803..842805)
+ /locus_tag="SARI_00822"
+ /note="putative [Fe4-S4] binding site [ion binding]; other
+ site"
+ /db_xref="CDD:239156"
+ misc_feature order(842809..842811,842992..842994,843067..843069,
+ 843073..843081,843163..843168,843172..843174,
+ 843181..843186,843250..843261,843310..843312,
+ 843316..843318,843541..843552,843556..843558,
+ 843673..843675,843829..843831,843862..843870,
+ 843880..843882,843940..843948,843955..843957,
+ 843991..843996,844009..844011)
+ /locus_tag="SARI_00822"
+ /note="putative molybdopterin cofactor binding site
+ [chemical binding]; other site"
+ /db_xref="CDD:239156"
+ misc_feature <843907..844398
+ /locus_tag="SARI_00822"
+ /note="Molybdopterin-Binding (MopB) domain of the MopB
+ superfamily of proteins, a large, diverse, heterogeneous
+ superfamily of enzymes that, in general, bind
+ molybdopterin as a cofactor. The MopB domain is found in a
+ wide variety of molybdenum- and...; Region:
+ Molybdopterin-Binding; cl09928"
+ /db_xref="CDD:245203"
+ misc_feature 844462..844827
+ /locus_tag="SARI_00822"
+ /note="The MopB_CT_Thiosulfate-R-like CD contains
+ thiosulfate-, sulfur-, and polysulfide-reductases, and
+ other related proteins. Thiosulfate reductase catalyzes
+ the cleavage of sulfur-sulfur bonds in thiosulfate.
+ Polysulfide reductase is a membrane-bound enzyme...;
+ Region: MopB_CT_Thiosulfate-R-like; cd02778"
+ /db_xref="CDD:239179"
+ misc_feature order(844477..844491,844495..844506,844693..844695,
+ 844753..844755,844801..844806)
+ /locus_tag="SARI_00822"
+ /note="putative molybdopterin cofactor binding site; other
+ site"
+ /db_xref="CDD:239179"
+ gene 844830..845426
+ /locus_tag="SARI_00823"
+ CDS 844830..845426
+ /locus_tag="SARI_00823"
+ /inference="protein motif:HMMPfam:IPR001450"
+ /inference="protein motif:ScanRegExp:IPR001450"
+ /inference="similar to AA sequence:INSD:AAL20968.1"
+ /note="'KEGG: eci:UTI89_C1863 1.1e-52 putative
+ oxidoreductase Fe-S subunit K00178;
+ COG: COG0437 Fe-S-cluster-containing hydrogenase
+ components 1;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569884.1"
+ /db_xref="GI:161502772"
+ /db_xref="InterPro:IPR001450"
+ /translation="MRKEGTMNHLTTQYVMLHDEKRCIGCQACTVACKVLNDVPEGVS
+ RVQVQIRAPEQASDALTHFQFVRVSCQHCENAPCVSVCPTGASYRDENGIVQVDKSRC
+ IGCDYCVAACPFHVRYLNPQTGIADKCNFCADTRLAEGQSPACVSVCPTDALKFGRLD
+ ESEIQRWVNQKEVYRQQEARSGAVSLYRRKEVHQEGKA"
+ misc_feature 844851..845420
+ /locus_tag="SARI_00823"
+ /note="Fe-S-cluster-containing hydrogenase components 1
+ [Energy production and conversion]; Region: HybA; COG0437"
+ /db_xref="CDD:223514"
+ misc_feature 845109..845177
+ /locus_tag="SARI_00823"
+ /note="4Fe-4S binding domain; Region: Fer4; cl02805"
+ /db_xref="CDD:243197"
+ gene 845423..846187
+ /locus_tag="SARI_00824"
+ CDS 845423..846187
+ /locus_tag="SARI_00824"
+ /inference="protein motif:HMMPfam:IPR011577"
+ /inference="similar to AA sequence:REFSEQ:NP_456611.1"
+ /note="'KEGG: bbr:BB2124 1.0e-06 fdhC; formate
+ dehydrogenase subunit C precursor K00127;
+ COG: COG4117 Thiosulfate reductase cytochrome B subunit
+ (membrane anchoring protein);
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569885.1"
+ /db_xref="GI:161502773"
+ /db_xref="InterPro:IPR011577"
+ /translation="MNTIWGAELHYAPDYWPLWLIYAGVVVLLMLVGLVVHALLRRML
+ APKTADGEEHRDYLYSLAIRRWHWGNALLFILLLLSGLFGHFSLGPVALMVQVHTWCG
+ FALLAFWVGFVLINLTTGNGRHYRVNFSGLVTRCIRQTRFYLFGIMKGEAHPFAATEQ
+ NKFNPLQQLAYLAIMYALVPLLIITGLLCLYPQVAGLGPVMLVLHMALAIIGLLFICA
+ HLYLCTLGDTPGQIFRSMVDGYHRHRTAPRGDKSAV"
+ misc_feature 845423..846151
+ /locus_tag="SARI_00824"
+ /note="thiosulfate reductase cytochrome B subunit;
+ Provisional; Region: PRK15006"
+ /db_xref="CDD:184968"
+ misc_feature 845477..846151
+ /locus_tag="SARI_00824"
+ /note="Thiosulfate reductase cytochrome B subunit
+ (membrane anchoring protein) [Energy production and
+ conversion]; Region: COG4117"
+ /db_xref="CDD:226602"
+ gene 846311..847483
+ /gene="dacD"
+ /locus_tag="SARI_00825"
+ CDS 846311..847483
+ /gene="dacD"
+ /locus_tag="SARI_00825"
+ /inference="protein motif:FPrintScan:IPR001967"
+ /inference="protein motif:HMMPfam:IPR001967"
+ /inference="protein motif:HMMPfam:IPR012907"
+ /inference="protein motif:superfamily:IPR012338"
+ /inference="similar to AA sequence:REFSEQ:YP_217058.1"
+ /note="'removes C-terminal D-alanyl residues from
+ sugar-peptide cell wall precursors; penicillin-binding
+ protein 6B; one of four, DD-carboxypeptidase low-molecular
+ weight penicillin-binding proteins that remove terminal
+ D-alanine from pentapeptide side chains'"
+ /codon_start=1
+ /transl_table=11
+ /product="D-alanyl-D-alanine carboxypeptidase"
+ /protein_id="YP_001569886.1"
+ /db_xref="GI:161502774"
+ /db_xref="InterPro:IPR001967"
+ /db_xref="InterPro:IPR012338"
+ /db_xref="InterPro:IPR012907"
+ /translation="MLLKRRLFIAASLFAMHLSPALAADAVSFAPQPPAINAGAWVLM
+ DYTTGQVLTAGNEHQQRNPASLTKLMTGYVVDRAIDSHRISPDDIVTVGRDAWAKDNP
+ VFVGSSLMFLKEGDRVSVRDLSRGLIVDSGNDACVALADYIAGGQPQFVAMMNSYVKK
+ LNLQDTHFETVHGLDAPGQHSSAYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQN
+ RNGLLWDKTMHIDGLKTGHTSGAGFNLIASAVDGQRRLIAVVMGAESSKGREEQARKL
+ LQWGQQNFATVQILHSGKKVGSERIWYGDREKIALGAEQDFWMALPKAEIPHIKAKYV
+ LDKKDLEAPIAAHQRVGEIELYDRDKLIAQWPLVTLESVGKGGMFSRLSDYFQHKA"
+ misc_feature 846317..847480
+ /gene="dacD"
+ /locus_tag="SARI_00825"
+ /note="D-alanyl-D-alanine carboxypeptidase; Provisional;
+ Region: dacD; PRK11397"
+ /db_xref="CDD:183117"
+ misc_feature 846329..847099
+ /gene="dacD"
+ /locus_tag="SARI_00825"
+ /note="Beta-lactamase enzyme family; Region:
+ Beta-lactamase2; cl17872"
+ /db_xref="CDD:248426"
+ misc_feature 847160..847435
+ /gene="dacD"
+ /locus_tag="SARI_00825"
+ /note="Penicillin-binding protein 5, C-terminal domain;
+ Region: PBP5_C; smart00936"
+ /db_xref="CDD:198004"
+ gene 847634..848101
+ /locus_tag="SARI_00826"
+ CDS 847634..848101
+ /locus_tag="SARI_00826"
+ /inference="protein motif:HMMPfam:IPR010499"
+ /inference="protein motif:superfamily:IPR011256"
+ /inference="similar to AA sequence:INSD:AAO68502.1"
+ /note="'COG: COG3449 DNA gyrase inhibitor;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA gyrase inhibitor"
+ /protein_id="YP_001569887.1"
+ /db_xref="GI:161502775"
+ /db_xref="InterPro:IPR010499"
+ /db_xref="InterPro:IPR011256"
+ /translation="MDYEIRQEQKRKIAGFHMVGPWEHTVKQGFKQLMMWVDGKQIVP
+ IEWIAVYYDNPDEVPAEKLRCDTVVSVAENFVLPDNSEGVIVTEIEGGEYATAVARVE
+ DHDFATPWYQFFDALLQDSAYQITSEPCFETYLNNGVEDGYWDIEMYIPVRRK"
+ misc_feature 847634..848098
+ /locus_tag="SARI_00826"
+ /note="DNA gyrase inhibitor; Provisional; Region:
+ PRK10016"
+ /db_xref="CDD:182195"
+ gene 848219..849277
+ /locus_tag="SARI_00827"
+ CDS 848219..849277
+ /locus_tag="SARI_00827"
+ /inference="similar to AA sequence:REFSEQ:YP_150113.1"
+ /note="'COG: COG1289 Predicted membrane protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569888.1"
+ /db_xref="GI:161502776"
+ /translation="MRADKSLSPFEIRLYLHYRIVHGIRIALAFIFTFLLVRLFSIPE
+ GTWPLITLVVIMGPISFWGNVAPRAFERIGGTILGAALGLVALRLELFSLPLMLVWCA
+ VAMFLCGWLTLGKKPYQALLIGITLAVVVGAPAGDMDTALWRGGDVILGSLLAMLFTG
+ IWPQRAFLHWRIQLAHCVTAYNRVYQAALSPNLLERPRLDRHLQQLLNNVVKMRGLIT
+ PASKETRIQKSVFEAIQTINRNLVCMLELQINAHWATRASHYVMLNAQTLRETQQMTQ
+ QTLLTIAHALYEGNPQPVMANTGKLNDIVAELRQLMNEHQGDTVAETPIHGYVWLSME
+ TARQLELLSHLICRALRK"
+ misc_feature <848219..849265
+ /locus_tag="SARI_00827"
+ /note="Predicted membrane protein [Function unknown];
+ Region: COG1289"
+ /db_xref="CDD:224208"
+ misc_feature 848312..848692
+ /locus_tag="SARI_00827"
+ /note="Fusaric acid resistance protein-like; Region:
+ FUSC_2; pfam13515"
+ /db_xref="CDD:222189"
+ gene 849520..849855
+ /locus_tag="SARI_00828"
+ CDS 849520..849855
+ /locus_tag="SARI_00828"
+ /inference="protein motif:HMMPfam:IPR007458"
+ /inference="protein motif:HMMPIR:IPR007458"
+ /inference="similar to AA sequence:SwissProt:P67606"
+ /note="'KEGG: pac:PPA1242 0.0036 ATP synthase delta chain
+ K02113;
+ COG: COG2926 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569889.1"
+ /db_xref="GI:161502777"
+ /db_xref="InterPro:IPR007458"
+ /translation="METTKPSFQDVLEFVRLFRRKNKLQREIQDIEKKIRDNQKRVLL
+ LDNLSDYIKPGMSVEAIQGIIASMKSDYEDRVDDYIIKNAEISKERRDISKKLKAMGE
+ MKHADVKAE"
+ misc_feature 849520..849831
+ /locus_tag="SARI_00828"
+ /note="hypothetical protein; Provisional; Region:
+ PRK05423"
+ /db_xref="CDD:180070"
+ gene complement(849889..850791)
+ /locus_tag="SARI_00829"
+ CDS complement(849889..850791)
+ /locus_tag="SARI_00829"
+ /inference="protein motif:HMMPfam:IPR006204"
+ /inference="protein motif:HMMPfam:IPR013750"
+ /inference="protein motif:HMMPIR:IPR012363"
+ /inference="similar to AA sequence:REFSEQ:YP_217054.1"
+ /note="'KEGG: lwe:lwe1128 2.0e-48 propanediol utilization
+ kinase PduX K01009;
+ COG: COG4542 Protein involved in propanediol utilization,
+ and related proteins (includes coumermycin biosynthetic
+ protein), possible kinase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569890.1"
+ /db_xref="GI:161502778"
+ /db_xref="InterPro:IPR006204"
+ /db_xref="InterPro:IPR012363"
+ /db_xref="InterPro:IPR013750"
+ /translation="MRAPYSYLKGNNVAVAQCPASCGELIQGWILGSEKLVSCPVDWY
+ STVAVTAAPPLVNERPLSRAMVERILAHWQYPAHWSNEIRVDVRSSIPIAKGMASSTA
+ DIAATAVATAHHLGHSLDEATLARLCVSIEPTDSTVFHQLTLFDHNNAATQIACEPPP
+ PLDLLVLESPATLRTQDYHRLPRRQKLLASSATLQQAWSLVQEACITQNPLRLGEAAT
+ LSAIASQTLLPKPGFTALLSLVEECDLYGLNVAHSGSVVGLMLDRKRHDIARLKSKLA
+ EKKLTRHWPKQHLLKMVTGGVKLQ"
+ misc_feature complement(849919..850791)
+ /locus_tag="SARI_00829"
+ /note="Protein involved in propanediol utilization, and
+ related proteins (includes coumermycin biosynthetic
+ protein), possible kinase [Secondary metabolites
+ biosynthesis, transport, and catabolism]; Region: PduX;
+ COG4542"
+ /db_xref="CDD:226917"
+ gene complement(850849..852063)
+ /locus_tag="SARI_00830"
+ CDS complement(850849..852063)
+ /locus_tag="SARI_00830"
+ /inference="protein motif:FPrintScan:IPR000890"
+ /inference="protein motif:HMMPanther:IPR000890"
+ /inference="protein motif:HMMPfam:IPR000890"
+ /inference="protein motif:HMMPIR:IPR004372"
+ /inference="protein motif:HMMTigr:IPR004372"
+ /inference="protein motif:ScanRegExp:IPR000890"
+ /inference="similar to AA sequence:SwissProt:P74879"
+ /note="'involved in coenzyme B(12)-dependent 1,
+ 2-propanediol degradation; important for the synthesis of
+ propionyl coenzyme A during growth on 1,2-propanediol'"
+ /codon_start=1
+ /transl_table=11
+ /product="propionate kinase"
+ /protein_id="YP_001569891.1"
+ /db_xref="GI:161502779"
+ /db_xref="InterPro:IPR000890"
+ /db_xref="InterPro:IPR004372"
+ /translation="MTHNIMAINAGSSSLKFQLLAMPQGDMRCQGLIERIGMADAQVT
+ IKTLSQKWQETVPVADHRDAVTLLLEKLLGYQIINSLRDIDGVGHRVAHGGEFFKDST
+ LVTDETLAQIERLAELAPLHNPVNALGIHVFRQLLPDAPSVAVFDTAFHQTLDEPAYI
+ YPLPWRYYAELGIRRYGFHGTSHKYVSGALAEKLGVPLSALRVICCHLGNGSSVCAIK
+ NGHSVNTSMGFTPQSGVMMGTRSGDIDPSILPWIAQRESKTPQQLNQLLNNESGLLGV
+ SGVSSDYRDVEQAADTGNRQAKLALTLFAERIRATIGSYIMQMGGLDALVFTGGIGEN
+ SACARSAVCHNLQFLGLAVDEEKNQRNATFIQTENALVKVAVINTNEELMIAQDVMRI
+ ALPATEGLCVPA"
+ misc_feature complement(850852..852063)
+ /locus_tag="SARI_00830"
+ /note="propionate kinase; Reviewed; Region: PRK12397"
+ /db_xref="CDD:183500"
+ misc_feature complement(850885..852051)
+ /locus_tag="SARI_00830"
+ /note="propionate/acetate kinase; Provisional; Region:
+ PRK12379"
+ /db_xref="CDD:183484"
+ gene complement(852060..852500)
+ /locus_tag="SARI_00831"
+ CDS complement(852060..852500)
+ /locus_tag="SARI_00831"
+ /inference="protein motif:HMMTigr:IPR012381"
+ /inference="similar to AA sequence:INSD:AAD39020.1"
+ /note="'KEGG: ctc:CTC01446 7.1e-12 lysine-sensitive
+ aspartokinase III K00928;
+ COG: COG4917 Ethanolamine utilization protein;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569892.1"
+ /db_xref="GI:161502780"
+ /db_xref="InterPro:IPR012381"
+ /translation="MKRIMLIGPSRCGKTSLMQCWRGETLHYQKTQTIIWSPAAIDTP
+ GEYLENRCLYSALLTSACDAEVIALVLNADAAWSPFSPGFTAPMNRPTIGIVTKSDLA
+ SPPLISCVRTWLEQAGAQQVFITSSVTKSGFDEMAAFLNAKESL"
+ misc_feature complement(852093..852485)
+ /locus_tag="SARI_00831"
+ /note="Rat sarcoma (Ras)-like superfamily of small
+ guanosine triphosphatases (GTPases); Region:
+ Ras_like_GTPase; cd00882"
+ /db_xref="CDD:206648"
+ misc_feature complement(852456..852479)
+ /locus_tag="SARI_00831"
+ /note="G1 box; other site"
+ /db_xref="CDD:206648"
+ misc_feature complement(order(852117..852125,852201..852203,
+ 852207..852212,852366..852368,852453..852473))
+ /locus_tag="SARI_00831"
+ /note="GTP/Mg2+ binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:206648"
+ misc_feature complement(852408..852410)
+ /locus_tag="SARI_00831"
+ /note="G2 box; other site"
+ /db_xref="CDD:206648"
+ misc_feature complement(852366..852377)
+ /locus_tag="SARI_00831"
+ /note="G3 box; other site"
+ /db_xref="CDD:206648"
+ misc_feature complement(order(852303..852308,852366..852371))
+ /locus_tag="SARI_00831"
+ /note="Switch II region; other site"
+ /db_xref="CDD:206648"
+ misc_feature complement(852201..852212)
+ /locus_tag="SARI_00831"
+ /note="G4 box; other site"
+ /db_xref="CDD:206648"
+ misc_feature complement(852117..852125)
+ /locus_tag="SARI_00831"
+ /note="G5 box; other site"
+ /db_xref="CDD:206648"
+ gene complement(852505..852855)
+ /locus_tag="SARI_00832"
+ CDS complement(852505..852855)
+ /locus_tag="SARI_00832"
+ /inference="protein motif:HMMPfam:IPR000249"
+ /inference="protein motif:HMMPIR:IPR009307"
+ /inference="similar to AA sequence:INSD:CAJ87629.1"
+ /note="'COG: COG4810 Ethanolamine utilization protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569893.1"
+ /db_xref="GI:161502781"
+ /db_xref="InterPro:IPR000249"
+ /db_xref="InterPro:IPR009307"
+ /translation="MEIHTTTERMIQEYVPGKQVTLAHLIANPGKDLFKKLGLPDAVA
+ AIGILTITPSEASIIACDIATKSGAVEIGFLDRFTGAVVLTGDVSAVEYALKQVTRTL
+ SGMMRFTSCPVTRT"
+ misc_feature complement(852508..852834)
+ /locus_tag="SARI_00832"
+ /note="1,2-propanediol utilization protein U
+ (PduU)/ethanolamine utilization protein S (EutS),
+ Bacterial Micro-Compartment (BMC) domain; Region:
+ BMC_PduU-EutS; cd07046"
+ /db_xref="CDD:132886"
+ misc_feature complement(order(852619..852621,852625..852627,
+ 852640..852642,852658..852663,852670..852672,
+ 852697..852699,852706..852708))
+ /locus_tag="SARI_00832"
+ /note="putative hexamer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:132886"
+ misc_feature complement(852625..852627)
+ /locus_tag="SARI_00832"
+ /note="putative hexagonal pore; other site"
+ /db_xref="CDD:132886"
+ gene complement(852855..853409)
+ /locus_tag="SARI_00833"
+ CDS complement(852855..853409)
+ /locus_tag="SARI_00833"
+ /inference="protein motif:BlastProDom:IPR000249"
+ /inference="protein motif:HMMPfam:IPR000249"
+ /inference="protein motif:HMMPIR:IPR011238"
+ /inference="similar to AA sequence:REFSEQ:YP_150119.1"
+ /note="'COG: COG4577 Carbon dioxide concentrating
+ mechanism/carboxysome shell protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569894.1"
+ /db_xref="GI:161502782"
+ /db_xref="InterPro:IPR000249"
+ /db_xref="InterPro:IPR011238"
+ /translation="MSQAIGILELTSIAKGMEAGDAMLKSANVSLLMSKTICPGKFLL
+ MLGGDVGAVQQAIAAGVSLAGEMLVDSLVLANIHASVLPAISGLNAVEQRQAIGIVET
+ WSVAACISAADRAVKASSVTLVRVHMAFGIGGKCYMVVAGDISDVNNAVTVASESAGE
+ KGLLVYRSVIPRPHEAMWRQMVEG"
+ misc_feature complement(852867..853409)
+ /locus_tag="SARI_00833"
+ /note="PduT-like ethanolamine utilization protein; Region:
+ eut_PduT; TIGR02526"
+ /db_xref="CDD:131578"
+ misc_feature complement(853176..853400)
+ /locus_tag="SARI_00833"
+ /note="1,2-propanediol utilization protein T (PduT),
+ Bacterial Micro-Compartment (BMC) domain repeat 1; Region:
+ BMC_PduT_repeat1; cd07053"
+ /db_xref="CDD:132893"
+ misc_feature complement(order(853287..853289,853302..853304,
+ 853317..853319,853335..853340,853347..853349,
+ 853374..853376,853383..853385))
+ /locus_tag="SARI_00833"
+ /note="putative hexamer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:132893"
+ misc_feature complement(853302..853304)
+ /locus_tag="SARI_00833"
+ /note="putative hexagonal pore; other site"
+ /db_xref="CDD:132893"
+ misc_feature complement(852891..853124)
+ /locus_tag="SARI_00833"
+ /note="1,2-propanediol utilization protein T (PduT),
+ Bacterial Micro-Compartment (BMC) domain repeat 2; Region:
+ BMC_PduT_repeat2; cd07054"
+ /db_xref="CDD:132894"
+ misc_feature complement(order(853005..853007,853026..853028,
+ 853041..853043,853059..853064,853071..853073,
+ 853098..853100,853107..853109))
+ /locus_tag="SARI_00833"
+ /note="putative hexamer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:132894"
+ misc_feature complement(853026..853028)
+ /locus_tag="SARI_00833"
+ /note="putative hexagonal pore; other site"
+ /db_xref="CDD:132894"
+ gene complement(853412..854767)
+ /locus_tag="SARI_00834"
+ CDS complement(853412..854767)
+ /locus_tag="SARI_00834"
+ /inference="protein motif:Gene3D:IPR012285"
+ /inference="protein motif:HMMPfam:IPR001450"
+ /inference="protein motif:HMMPfam:IPR011538"
+ /inference="protein motif:ScanRegExp:IPR001450"
+ /inference="protein motif:superfamily:IPR009051"
+ /inference="protein motif:superfamily:IPR011053"
+ /inference="similar to AA sequence:REFSEQ:ZP_00700078.1"
+ /note="'KEGG: eci:UTI89_C1819 1.1e-39 rnfC; electron
+ transport complex protein RnfC K03615;
+ COG: COG4656 Predicted NADH:ubiquinone oxidoreductase,
+ subunit RnfC;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569895.1"
+ /db_xref="GI:161502783"
+ /db_xref="InterPro:IPR001450"
+ /db_xref="InterPro:IPR009051"
+ /db_xref="InterPro:IPR011053"
+ /db_xref="InterPro:IPR011538"
+ /db_xref="InterPro:IPR012285"
+ /translation="MNTASTVNLADCDAQTIRDRVRAAGVTGAGGAGFPTHVKLQAQV
+ DTFLVNAAECEPMLKVDQQLMALQASRLIRGVQYAMRATGAREGIIALKEKYQTAIKA
+ LTPLLTPAIRLHMLPDVYPAGDEVLTIWLATGRRVPPAALPVSVGVVVNNVQTVLNIA
+ RAVEQQYPVTRRTLTVNGAVARPLTLTVPLGMPLREVLAIAGGATVDNPGFINGGPMM
+ GSLIPSLDAPVTKTTGGLLVLPKTHPLIARRMQDDRTILAIARTVCEQCRLCTELCPR
+ HLIGHELSPHLLVRAVNYHQAATPQLLLSALTCSECNVCESVACPVGISPVRINRMLK
+ RELRAQHQRYEGPLHPADEMAKYRLIPIKRLIAKLGLNDWYHDAPFTPFEPQPDWVIL
+ LLRQHIGASAIPCVQKGDRVVRGQCIADIPQDALGAPIHASIDGIVHEITDEAITVVR
+ G"
+ misc_feature complement(854360..854668)
+ /locus_tag="SARI_00834"
+ /note="Respiratory-chain NADH dehydrogenase 51 Kd subunit;
+ Region: Complex1_51K; pfam01512"
+ /db_xref="CDD:216542"
+ misc_feature complement(854111..854251)
+ /locus_tag="SARI_00834"
+ /note="SLBB domain; Region: SLBB; pfam10531"
+ /db_xref="CDD:220798"
+ misc_feature complement(853793..853978)
+ /locus_tag="SARI_00834"
+ /note="4Fe-4S dicluster domain; Region: Fer4_17;
+ pfam13534"
+ /db_xref="CDD:222205"
+ misc_feature complement(853430..>853615)
+ /locus_tag="SARI_00834"
+ /note="RnfC Barrel sandwich hybrid domain; Region: RnfC_N;
+ pfam13375"
+ /db_xref="CDD:222084"
+ gene complement(854764..855876)
+ /locus_tag="SARI_00835"
+ CDS complement(854764..855876)
+ /locus_tag="SARI_00835"
+ /inference="protein motif:HMMPfam:IPR001670"
+ /inference="protein motif:ScanRegExp:IPR001670"
+ /inference="similar to AA sequence:INSD:AAX65966.1"
+ /note="'KEGG: sec:SC2060 1.1e-157 pduQ; propanediol
+ utilization: propanol dehydrogenase K00100;
+ COG: COG1454 Alcohol dehydrogenase, class IV;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569896.1"
+ /db_xref="GI:161502784"
+ /db_xref="InterPro:IPR001670"
+ /translation="MNTFSLQTRLYSGQGSLKALKRFTNKHIWIICDAFLARSPLLDT
+ LRNALPANNRLSVFSDITPDPTIGTVVQGITQMQSLNPDVVIGFGGGSALDAAKAIVW
+ FSREFGIEIETCVAIPTTSGTGSEVTCACVISDPDKGIKYPLFNNSLYPDMAILDPML
+ VVSVPATITANTGVDVLTHALEAYVSLRANDFTDALAEKATQIVFQYLPVAVNKGDCL
+ ATRGKMHNASTLAGMAFSQAGLGLNHAIAHQLGGQFHLPHGLANALLLPSVIRFNARD
+ PRAAKRYARLAKVCRLCPESANETTCLNALTQRIEQLKKQCAIPTLAEALKDQKQAYT
+ PRIPAMAEAALADITLQTNPRTTDASAIRELLEALL"
+ misc_feature complement(854767..855876)
+ /locus_tag="SARI_00835"
+ /note="Alcohol dehydrogenase, class IV [Energy production
+ and conversion]; Region: EutG; COG1454"
+ /db_xref="CDD:224371"
+ misc_feature complement(854776..855867)
+ /locus_tag="SARI_00835"
+ /note="1,3-propanediol dehydrogenase (PPD) catalyzes the
+ reduction of 3-hydroxypropionaldehyde (3-HPA) to
+ 1,3-propanediol in glycerol metabolism; Region: PDD;
+ cd08180"
+ /db_xref="CDD:173939"
+ misc_feature complement(order(855103..855105,855133..855135,
+ 855145..855147,855340..855342,855352..855354,
+ 855373..855375,855397..855399,855451..855456,
+ 855511..855513,855517..855522,855583..855585,
+ 855592..855594,855601..855609,855778..855780))
+ /locus_tag="SARI_00835"
+ /note="putative active site [active]"
+ /db_xref="CDD:173939"
+ misc_feature complement(order(855103..855105,855145..855147,
+ 855340..855342,855352..855354))
+ /locus_tag="SARI_00835"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:173939"
+ gene complement(855887..857272)
+ /locus_tag="SARI_00836"
+ CDS complement(855887..857272)
+ /locus_tag="SARI_00836"
+ /inference="protein motif:HMMPfam:IPR002086"
+ /inference="protein motif:HMMPIR:IPR012408"
+ /inference="similar to AA sequence:REFSEQ:NP_460996.1"
+ /note="'KEGG: rru:Rru_A0914 7.3e-113 aldehyde
+ dehydrogenase K04021;
+ COG: COG1012 NAD-dependent aldehyde dehydrogenases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569897.1"
+ /db_xref="GI:161502785"
+ /db_xref="InterPro:IPR002086"
+ /db_xref="InterPro:IPR012408"
+ /translation="MNTSELEMLIRNILSEQLTPEKTQTKGNGIFQTVDEAIRAAHQA
+ FLRYQQCPLKTRSAIIHAMREELAPHLASLAEESAAETGMGNKEDKLLKNKAALDNTP
+ GIEDLTTTALTGDGGMVLFEYSPFGVIGSVAPSTNPTETIINNSISMLAAGNSVYFSP
+ HPGAKSVSLKLIGMIEEIAFRCCGIRNLLVTVAEPTFEATQQMMSHPDIAVLAITGGP
+ GIVAMGMKSGKKVIGAGAGNPPCIVDETADLVKAAEDIINGAAFDYNLPCIAEKSLIV
+ VESVAERLIQQMQAFGALLLSPSDTDKLRTVCLQDGHANKKLVGKSPATLLEASGIAT
+ PAKTPRLLIAAVNANDPWVTCEQLMPMLPIVKVSDFDSALALALKVEAGLHHTAIMHS
+ ENVSRLNLAARTLQTSIFVKNGPSYAGIGVGGEGFTTFTIATPTGEGTTSARTFARSR
+ RCVLTNGFSIR"
+ misc_feature complement(855908..857188)
+ /locus_tag="SARI_00836"
+ /note="Ethanolamine utilization protein EutE-like; Region:
+ ALDH_EutE; cd07121"
+ /db_xref="CDD:143439"
+ misc_feature complement(856469..856471)
+ /locus_tag="SARI_00836"
+ /note="putative catalytic cysteine [active]"
+ /db_xref="CDD:143439"
+ gene complement(857269..858276)
+ /locus_tag="SARI_00837"
+ CDS complement(857269..858276)
+ /locus_tag="SARI_00837"
+ /inference="protein motif:BlastProDom:IPR002779"
+ /inference="protein motif:HMMPfam:IPR002779"
+ /inference="protein motif:HMMPfam:IPR005624"
+ /inference="protein motif:HMMPIR:IPR009221"
+ /inference="protein motif:HMMTigr:IPR002779"
+ /inference="similar to AA sequence:INSD:CAD02411.1"
+ /note="'KEGG: noc:Noc_0867 1.3e-26 cobalamin
+ adenosyltransferase K00798;
+ COG: COG2096 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569898.1"
+ /db_xref="GI:161502786"
+ /db_xref="InterPro:IPR002779"
+ /db_xref="InterPro:IPR005624"
+ /db_xref="InterPro:IPR009221"
+ /translation="MAIYTRTGDAGTTALFSGQRVSKTHPRVEAYGTLDELNAALSLC
+ ACTTHHPQHRRFIESIQQQIFWFSAELASESEQPNPGQRYISTEEIAVLEAAIDAAMS
+ RVAVVHSFILPGRCEAASRLHFARTLARRAERRLVELSADIAVRQVLMRYINRLSDCL
+ YALARAEDHDAHQRHIINEVTRRYLASTYPSTIKESSMSLSFQELHQLIRSAVARAEE
+ LHVPVVISIVDGNGTPTVTWRMPDALLVSSELAPKKAWTAVAMKSATHELASAVQPGA
+ ALYGLDTHMQGKIVTFGGGFALWRNGVLIGGLGISGGSVEQDMDIAQAAIAAIDVRTY
+ Q"
+ misc_feature complement(857725..858276)
+ /locus_tag="SARI_00837"
+ /note="cob(I)alamin adenosyltransferase [Coenzyme
+ transport and metabolism]; Region: COG2096"
+ /db_xref="CDD:225007"
+ misc_feature complement(<857377..857694)
+ /locus_tag="SARI_00837"
+ /note="Uncharacterized protein, possibly involved in
+ utilization of glycolate and propanediol [General function
+ prediction only]; Region: GlcG; COG3193"
+ /db_xref="CDD:225734"
+ gene complement(858285..858560)
+ /locus_tag="SARI_00838"
+ CDS complement(858285..858560)
+ /locus_tag="SARI_00838"
+ /inference="protein motif:BlastProDom:IPR004992"
+ /inference="protein motif:HMMPfam:IPR004992"
+ /inference="protein motif:HMMPIR:IPR004992"
+ /inference="similar to AA sequence:INSD:CAJ87623.1"
+ /note="'KEGG: rru:Rru_A0384 0.0088 NADPH-quinone reductase
+ K00344;
+ COG: COG4576 Carbon dioxide concentrating
+ mechanism/carboxysome shell protein;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569899.1"
+ /db_xref="GI:161502787"
+ /db_xref="InterPro:IPR004992"
+ /translation="MYLARVTGAVVSTQKSPSLVGKKLLLVRRVSADEQLPPQPVNGD
+ EVAVDSVGAGVGELVLLSSGSSARHVFSGPNEAIDLAVVGIVDTLSH"
+ misc_feature complement(858291..858560)
+ /locus_tag="SARI_00838"
+ /note="Ethanolamine utilisation protein and carboxysome
+ structural protein domain family; Region: EutN_CcmL;
+ cl01889"
+ /db_xref="CDD:242765"
+ misc_feature complement(order(858300..858302,858306..858308,
+ 858312..858314,858321..858329,858357..858359,
+ 858375..858377,858408..858410,858423..858425,
+ 858519..858530,858534..858542,858552..858554,
+ 858558..858560))
+ /locus_tag="SARI_00838"
+ /note="Hexamer/Pentamer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:133473"
+ misc_feature complement(order(858324..858326,858339..858341,
+ 858357..858359,858441..858443,858468..858470,
+ 858477..858479,858555..858557))
+ /locus_tag="SARI_00838"
+ /note="central pore; other site"
+ /db_xref="CDD:133473"
+ gene complement(858564..859055)
+ /locus_tag="SARI_00839"
+ CDS complement(858564..859055)
+ /locus_tag="SARI_00839"
+ /inference="similar to AA sequence:REFSEQ:YP_150125.1"
+ /note="'COG: NOG15374 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569900.1"
+ /db_xref="GI:161502788"
+ /translation="MNEDKVQRIVEEVVFRLQRRAQSKITLSTAQLRDADSRTLFSRY
+ GNLRILLAELPLLRRIAEQNDSDITAMKIHCALALGVNVQISLRRTLLASLPVKRLAR
+ LPLSFCDEKGQAIILHSGQLLSYSDIVRLTCQILVLRRRCIVTAPAYEAASVRNIQLI
+ RQE"
+ misc_feature complement(858567..859055)
+ /locus_tag="SARI_00839"
+ /note="putative propanediol utilization protein PduM;
+ Provisional; Region: PRK15428"
+ /db_xref="CDD:185326"
+ gene complement(859052..859684)
+ /locus_tag="SARI_00840"
+ CDS complement(859052..859684)
+ /locus_tag="SARI_00840"
+ /inference="protein motif:HMMPfam:IPR008300"
+ /inference="protein motif:HMMPIR:IPR008300"
+ /inference="similar to AA sequence:INSD:AAD39011.1"
+ /note="'KEGG: dar:Daro_2921 2.2e-40 acetate kinase
+ K00925;
+ COG: COG4869 Propanediol utilization protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569901.1"
+ /db_xref="GI:161502789"
+ /db_xref="InterPro:IPR008300"
+ /translation="MDKTLLESTVHKVLDELRNRPIPLGVSNRHIHLCAADYARLFPE
+ QAIREKKALLQPGQYAAEQTITLAGPKSQLKKVRLLGPLRNVSQVEISRTDARTLGIA
+ APLRMSGDLQGTPGIRLISPFAELELASGVIVAQRHIHMSPLDALIFRVAHGDTVSVA
+ IEGSERRLIFDNVAIRVSPDMRLEMHIDTDEANAAGADDPHTFASLVARR"
+ misc_feature complement(859076..859684)
+ /locus_tag="SARI_00840"
+ /note="propanediol utilization phosphotransacylase;
+ Provisional; Region: PRK15070"
+ /db_xref="CDD:237899"
+ misc_feature complement(859382..859624)
+ /locus_tag="SARI_00840"
+ /note="Propanediol utilisation protein PduL; Region: PduL;
+ pfam06130"
+ /db_xref="CDD:218906"
+ misc_feature complement(859091..859294)
+ /locus_tag="SARI_00840"
+ /note="Propanediol utilisation protein PduL; Region: PduL;
+ pfam06130"
+ /db_xref="CDD:218906"
+ gene complement(859684..860127)
+ /locus_tag="SARI_00841"
+ CDS complement(859684..860127)
+ /locus_tag="SARI_00841"
+ /inference="protein motif:BlastProDom:IPR000249"
+ /inference="protein motif:HMMPfam:IPR000249"
+ /inference="similar to AA sequence:INSD:CAJ87620.1"
+ /note="'COG: COG4577 Carbon dioxide concentrating
+ mechanism/carboxysome shell protein;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569902.1"
+ /db_xref="GI:161502790"
+ /db_xref="InterPro:IPR000249"
+ /translation="MKQSLGLLEVSGLALAISCADVMAKAASITLVGLEKTHGSGWTV
+ IKITGDVASIQAAIITGASFADQRHGLIAHKVIARPGDGILAVIPESAPAIAQAAPIK
+ EPQLPEVQQDLSPLISCNLCLDPACKRQKGEPRTQCLHSGKRGDA"
+ misc_feature complement(859693..860127)
+ /locus_tag="SARI_00841"
+ /note="Carbon dioxide concentrating mechanism/carboxysome
+ shell protein [Secondary metabolites biosynthesis,
+ transport, and catabolism / Energy production and
+ conversion]; Region: CcmK; COG4577"
+ /db_xref="CDD:226943"
+ misc_feature complement(859888..860118)
+ /locus_tag="SARI_00841"
+ /note="1,2-propanediol utilization protein K (PduK),
+ Bacterial Micro-Compartment (BMC) domain repeat 1l;
+ Region: BMC_PduK; cd07056"
+ /db_xref="CDD:132896"
+ misc_feature complement(order(860002..860004,860020..860022,
+ 860035..860037,860053..860058,860065..860067,
+ 860092..860094,860101..860103))
+ /locus_tag="SARI_00841"
+ /note="putative hexamer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:132896"
+ misc_feature complement(860020..860022)
+ /locus_tag="SARI_00841"
+ /note="putative hexagonal pore; other site"
+ /db_xref="CDD:132896"
+ gene complement(860152..860427)
+ /locus_tag="SARI_00842"
+ CDS complement(860152..860427)
+ /locus_tag="SARI_00842"
+ /inference="protein motif:BlastProDom:IPR000249"
+ /inference="protein motif:HMMPfam:IPR000249"
+ /inference="protein motif:ScanRegExp:IPR000249"
+ /inference="similar to AA sequence:REFSEQ:YP_310956.1"
+ /note="'COG: COG4577 Carbon dioxide concentrating
+ mechanism/carboxysome shell protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569903.1"
+ /db_xref="GI:161502791"
+ /db_xref="InterPro:IPR000249"
+ /translation="MNNALGLVETKGLVGAIEAADAMVKSANVQLVGYEKIGSGLVTV
+ MVRGDVGAVKAAVDAGSVAASAVGEVKSCHVIPRPHSDVEAILPKSA"
+ misc_feature complement(<860155..860427)
+ /locus_tag="SARI_00842"
+ /note="Carbon dioxide concentrating mechanism/carboxysome
+ shell protein [Secondary metabolites biosynthesis,
+ transport, and catabolism / Energy production and
+ conversion]; Region: CcmK; COG4577"
+ /db_xref="CDD:226943"
+ misc_feature complement(860164..860418)
+ /locus_tag="SARI_00842"
+ /note="1,2-propanediol utilization protein A (PduA),
+ Bacterial Micro-Compartment (BMC) domain; Region:
+ BMC_PduA; cd07059"
+ /db_xref="CDD:132899"
+ misc_feature complement(order(860182..860184,860191..860196,
+ 860200..860202,860206..860214,860305..860313,
+ 860320..860322,860335..860337,860353..860358,
+ 860365..860367,860392..860394,860401..860403))
+ /locus_tag="SARI_00842"
+ /note="Hexamer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:132899"
+ misc_feature complement(860320..860322)
+ /locus_tag="SARI_00842"
+ /note="Putative hexagonal pore residue; other site"
+ /db_xref="CDD:132899"
+ gene complement(860420..860797)
+ /locus_tag="SARI_00843"
+ CDS complement(860420..860797)
+ /locus_tag="SARI_00843"
+ /inference="protein motif:HMMPIR:IPR009192"
+ /inference="protein motif:superfamily:IPR010254"
+ /inference="similar to AA sequence:REFSEQ:ZP_00700069.1"
+ /note="'COG: NOG12182 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569904.1"
+ /db_xref="GI:161502792"
+ /db_xref="InterPro:IPR009192"
+ /db_xref="InterPro:IPR010254"
+ /translation="MESNHNLPAIVITTLRCHISDWQHVLLGIEEEGIPWVVQEQEAG
+ EVIYQAWLAASRSPLLVGIACDREKLIVHYKNLPPSAPLFTLTYHQNNCAQRCTGNNA
+ ARLVKGIPFRECDSSSTGEKQYE"
+ misc_feature complement(860462..860776)
+ /locus_tag="SARI_00843"
+ /note="Dehydratase medium subunit; Region: Dehydratase_MU;
+ pfam02288"
+ /db_xref="CDD:202190"
+ gene complement(860787..862619)
+ /locus_tag="SARI_00844"
+ CDS complement(860787..862619)
+ /locus_tag="SARI_00844"
+ /inference="protein motif:HMMPIR:IPR009191"
+ /inference="similar to AA sequence:INSD:AAP48663.1"
+ /note="'COG: NOG06036 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569905.1"
+ /db_xref="GI:161502793"
+ /db_xref="InterPro:IPR009191"
+ /translation="MQYIAGIDIGNSSTEVALAALSDSGELIIKSSALAETTGIKGTL
+ RNVFGIQEALALAAKNAGINVSDISLIRINEATPVIGDVAMETITETIITESTMIGHN
+ PKTPGGVGLGIGVTITPQELLTCPADKPYILVVSSAFDFADVATMINAAVRAGYQLTG
+ AILQQDDGVLVSNRLEKPLPVVDEVRYIDRIPLGMLAAIEVAVPGKVIETLSNPYGIA
+ TVFNLNSEETKNIVPMARALIGNRSAVVVKTPSGDVKARAIPAGNIELLSQGRTLRID
+ VAAGADAIMKAVSNCPQLDNVTGEAGTNIGGMLEHVRQTMAELTNKPSAEIFIQDLLA
+ VDTSVPVSVTGGLAGEFSLEQAVGIASMVKSDRLQMAMIAREIEQKLSIDVQVGGAEA
+ EAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGEIIATHLAGAGDMVTMIIAREL
+ GLNDRYLAEEIKKYPLAKVESLFHLRHEDGSVQFFPAPLPPEVFARVCVVKPDELVPL
+ PGDIALEKVRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSALDFEVPQ
+ LVTDALAHYRLVAGRGNIRGTEGPRNAVATGLILSWHKAFAHGK"
+ misc_feature complement(<862410..862610)
+ /locus_tag="SARI_00844"
+ /note="Cell division protein FtsA; Region: FtsA; cl17206"
+ /db_xref="CDD:247760"
+ misc_feature complement(860808..861800)
+ /locus_tag="SARI_00844"
+ /note="Diol dehydratase reactivase ATPase-like domain;
+ Region: DDR; pfam08841"
+ /db_xref="CDD:149788"
+ gene complement(862634..863152)
+ /locus_tag="SARI_00845"
+ CDS complement(862634..863152)
+ /locus_tag="SARI_00845"
+ /inference="protein motif:HMMPfam:IPR003207"
+ /inference="protein motif:HMMPIR:IPR003207"
+ /inference="similar to AA sequence:INSD:AAP48662.1"
+ /note="'KEGG: sec:SC2050 4.8e-77 pduE; propanediol
+ utilization: dehydratase, small subunit K06122;
+ COG: COG4910 Propanediol dehydratase, small subunit;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569906.1"
+ /db_xref="GI:161502794"
+ /db_xref="InterPro:IPR003207"
+ /translation="MNTEAIESMVRDVLSRMNSLQGQTSVSAAVGTSTHTAKVSDYPL
+ ANKHPEWVKTATNKTLDDFTLENVLSDNVTAQDMRITPETLRIQAAIAKDAGRDRLAM
+ NFERAAELTAVPDDRILEIYNALRPYRSTKEELMAIADDLESRYQAKICAAFVREAAT
+ LYVERKKLKGDD"
+ misc_feature complement(862637..863152)
+ /locus_tag="SARI_00845"
+ /note="Propanediol dehydratase, small subunit [Secondary
+ metabolites biosynthesis, transport, and catabolism];
+ Region: PduE; COG4910"
+ /db_xref="CDD:227247"
+ gene complement(863167..863841)
+ /locus_tag="SARI_00846"
+ CDS complement(863167..863841)
+ /locus_tag="SARI_00846"
+ /inference="protein motif:HMMPfam:IPR003208"
+ /inference="protein motif:HMMPIR:IPR003208"
+ /inference="protein motif:superfamily:IPR010254"
+ /inference="similar to AA sequence:PDB:1EGM"
+ /note="'KEGG: stm:STM2041 1.1e-104 pduD; Propanediol
+ utilization: dehydratase, medium subunit K06121;
+ COG: COG4909 Propanediol dehydratase, large subunit;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569907.1"
+ /db_xref="GI:161502795"
+ /db_xref="InterPro:IPR003208"
+ /db_xref="InterPro:IPR010254"
+ /translation="MEINEKLLRQIIEDVLSEMQTSDTPVSFHAPSATAVAQKAAPGG
+ ESFLTEIGEAKQGTQQDEVVIAVGPAFGLSQTVNIVGLPHKSILREVIAGIEEEGIKA
+ RVIRCFKSSDVAFVAVEGNRLSGSGISIGIQSKGTTVIHQQGLPPLSNLELFPQAPLL
+ TLETYRQIGKNAARYAKRESPQPVPTLNDQMARPKYQAKSAILHIKETKYVVTGKNPQ
+ ELRVAL"
+ misc_feature complement(863170..863841)
+ /locus_tag="SARI_00846"
+ /note="propanediol dehydratase medium subunit;
+ Provisional; Region: pduD; PRK15042"
+ /db_xref="CDD:237886"
+ gene complement(863852..865516)
+ /locus_tag="SARI_00847"
+ CDS complement(863852..865516)
+ /locus_tag="SARI_00847"
+ /inference="protein motif:HMMPfam:IPR003206"
+ /inference="protein motif:HMMPIR:IPR009204"
+ /inference="similar to AA sequence:INSD:AAC98384.1"
+ /note="'KEGG: stm:STM2040 1.1e-290 pduC; glycerol
+ dehydratase large subunit K06120;
+ COG: COG4909 Propanediol dehydratase, large subunit;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569908.1"
+ /db_xref="GI:161502796"
+ /db_xref="InterPro:IPR003206"
+ /db_xref="InterPro:IPR009204"
+ /translation="MRSKRFEALAKRPVNQDGFVKEWIEEGFIAMESPNDPKPSIKIV
+ NGAVTELDGKPVSDFDLIDHFIARYGINLARAEEVMAMDSVKLANMLCDPNVKRSDIV
+ PLTTAMTPAKIVEVVSQMNVVEMMMAMQKMRARRTPSQQAHVTNVKDNPVQIAADAAE
+ GAWRGFDEQETTVAVARYAPFNAIALLVGSQVGRPGVLTQCSLEEATELKLGMLGHTC
+ YAETISVYGTEPVFTDGDDTPWSKGFLASSYASRGLKMRFTSGSGSEVQMGYAEGKSM
+ LYLEARCIYITKAAGVQGLQNGSVSCIGVPSAVPSGIRAVLAENLICSSLDLECASSN
+ DQTFTHSDMRRTARLLMQFLPGTDFISSGYSAVPNYDNMFAGSNEDAEDFDDYNVIQR
+ DLKVDGGLRPVREEDVIAIRNKAARALQAVFAGMGLPPITDEEVEAATYAHGSKDMPE
+ RNIVEDIKFAQDIINKNRNGLEVVKALAKGGFPDVAQDMLNIQKAKLTGDYLHTSAII
+ VGSGQVLSAVNDVNDYAGPATGYRLQGERWEEIKNIPGALDPNELG"
+ misc_feature complement(863858..865516)
+ /locus_tag="SARI_00847"
+ /note="Propanediol dehydratase, large subunit [Secondary
+ metabolites biosynthesis, transport, and catabolism];
+ Region: PduC; COG4909"
+ /db_xref="CDD:227246"
+ misc_feature complement(863861..865495)
+ /locus_tag="SARI_00847"
+ /note="Dehydratase large subunit. This family contains the
+ large (alpha) subunit of B12-dependent glycerol
+ dehydratases (GDHs) and B12-dependent diol dehydratases
+ (DDHs). GDH is isofunctional with DDH. These enzymes can
+ each catalyze the conversion of 1; Region: Dehydratase_LU;
+ cd03687"
+ /db_xref="CDD:239658"
+ misc_feature complement(order(863867..863869,863873..863875,
+ 863921..863923,863936..863941,863945..863947,
+ 864176..864178,864188..864190,864194..864196,
+ 864302..864304,864338..864343,864350..864352,
+ 864359..864364,864368..864376,864419..864421,
+ 864479..864481,864485..864490,864494..864496,
+ 864575..864580,864584..864589,864593..864595,
+ 865037..865039,865046..865048,865127..865129,
+ 865145..865147,865154..865156,865160..865162,
+ 865232..865234,865238..865240,865250..865252,
+ 865448..865450,865454..865462,865472..865474,
+ 865481..865483,865490..865492))
+ /locus_tag="SARI_00847"
+ /note="alpha-alpha subunit/dimer interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:239658"
+ misc_feature complement(order(864389..864397,864401..864403,
+ 864407..864409,864497..864499,864506..864511,
+ 864605..864607,864614..864616,864707..864709,
+ 864716..864718,864812..864817,864986..864988,
+ 865076..865078,865439..865441,865463..865465))
+ /locus_tag="SARI_00847"
+ /note="alpha-beta subunit interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:239658"
+ misc_feature complement(order(863969..863971,863975..863980,
+ 864005..864010,864017..864028,864035..864040,
+ 864068..864070,864104..864106,864536..864538,
+ 864644..864655,864761..864766,864776..864778,
+ 864788..864790,864794..864799,864803..864811,
+ 864818..864820,864830..864832,864902..864907,
+ 865310..865312,865334..865336))
+ /locus_tag="SARI_00847"
+ /note="alpha-gamma subunit interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:239658"
+ misc_feature complement(order(864395..864400,864431..864433,
+ 864509..864514,864629..864631,864713..864718,
+ 864815..864817,864851..864856,864902..864904,
+ 864911..864913,865001..865003,865007..865009,
+ 865088..865090,865094..865096))
+ /locus_tag="SARI_00847"
+ /note="active site"
+ /db_xref="CDD:239658"
+ misc_feature complement(order(864431..864433,864509..864514,
+ 864629..864631,864851..864856,865007..865009,
+ 865088..865090,865094..865096))
+ /locus_tag="SARI_00847"
+ /note="substrate and K+ binding site; other site"
+ /db_xref="CDD:239658"
+ misc_feature complement(order(864629..864631,864854..864856,
+ 865007..865009,865094..865096))
+ /locus_tag="SARI_00847"
+ /note="K+ binding site [ion binding]; other site"
+ /db_xref="CDD:239658"
+ misc_feature complement(order(864395..864400,864509..864511,
+ 864713..864718,864815..864817,864851..864853,
+ 864902..864904,864911..864913,865001..865003))
+ /locus_tag="SARI_00847"
+ /note="cobalamin binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:239658"
+ gene complement(865535..866347)
+ /locus_tag="SARI_00848"
+ CDS complement(865535..866347)
+ /locus_tag="SARI_00848"
+ /inference="protein motif:HMMPfam:IPR000249"
+ /inference="protein motif:HMMPIR:IPR009193"
+ /inference="protein motif:superfamily:IPR012294"
+ /inference="similar to AA sequence:INSD:AAX65953.1"
+ /note="'KEGG: nfa:nfa52250 0.0031 putative protease;
+ COG: COG4816 Ethanolamine utilization protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569909.1"
+ /db_xref="GI:161502797"
+ /db_xref="InterPro:IPR000249"
+ /db_xref="InterPro:IPR009193"
+ /db_xref="InterPro:IPR012294"
+ /translation="MSSNELVEQIMAQVIARVATPEKTVSSDTPHPKRETAMAEKSCS
+ LTEFVGTAIGDTIGLVIANVDSALLEAMKLEKCYRSIGILGARTGAGPHIMAADEAVK
+ ATNTEVVSIELTRDTKGGAGHGSLIILGGNDVSDVKRGIEVALKELDRTFGDVYANEA
+ GHIELQYTARASYALEKAFGAPVGRACGVIVGAPASVGVLMADTALKSANVDVVAYSS
+ PAHGTSFSNEAILVISGDSGAVRQAVISAREIGKTVLATLGDEPKNDRLSYI"
+ misc_feature complement(865538..866344)
+ /locus_tag="SARI_00848"
+ /note="propanediol utilization protein PduB; Provisional;
+ Region: PRK15415"
+ /db_xref="CDD:185313"
+ misc_feature complement(865811..866212)
+ /locus_tag="SARI_00848"
+ /note="1,2-propanediol utilization protein B (PduB),
+ Bacterial Micro-Compartment (BMC) domain repeat 1; Region:
+ BMC_PduB_repeat1; cd07047"
+ /db_xref="CDD:132887"
+ misc_feature complement(order(865979..865981,866009..866011,
+ 866024..866026,866042..866047,866054..866056,
+ 866075..866077,866084..866086))
+ /locus_tag="SARI_00848"
+ /note="putative hexamer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:132887"
+ misc_feature complement(866009..866011)
+ /locus_tag="SARI_00848"
+ /note="putative hexagonal pore; other site"
+ /db_xref="CDD:132887"
+ misc_feature complement(865583..865792)
+ /locus_tag="SARI_00848"
+ /note="1,2-propanediol utilization protein B (PduB),
+ Bacterial Micro-Compartment (BMC) domain repeat 2; Region:
+ BMC_PduB_repeat2; cd07048"
+ /db_xref="CDD:132888"
+ misc_feature complement(order(865664..865666,865694..865696,
+ 865709..865711,865727..865732,865739..865741,
+ 865766..865768,865775..865777))
+ /locus_tag="SARI_00848"
+ /note="putative hexamer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:132888"
+ misc_feature complement(865694..865696)
+ /locus_tag="SARI_00848"
+ /note="putative hexagonal pore; other site"
+ /db_xref="CDD:132888"
+ gene complement(866344..866628)
+ /locus_tag="SARI_00849"
+ CDS complement(866344..866628)
+ /locus_tag="SARI_00849"
+ /inference="protein motif:BlastProDom:IPR000249"
+ /inference="protein motif:HMMPfam:IPR000249"
+ /inference="protein motif:ScanRegExp:IPR000249"
+ /inference="similar to AA sequence:INSD:CAJ87612.1"
+ /note="'COG: COG4577 Carbon dioxide concentrating
+ mechanism/carboxysome shell protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569910.1"
+ /db_xref="GI:161502798"
+ /db_xref="InterPro:IPR000249"
+ /translation="MQQEALGMVETKGLTAAIEAADAMVKSANVMLVGYEKIGSGLVT
+ VIVRGDVGAVKAATDAGAAAARNVGDVKAVHVIPRPHTDVEKILPKGINP"
+ misc_feature complement(<866356..866622)
+ /locus_tag="SARI_00849"
+ /note="Carbon dioxide concentrating mechanism/carboxysome
+ shell protein [Secondary metabolites biosynthesis,
+ transport, and catabolism / Energy production and
+ conversion]; Region: CcmK; COG4577"
+ /db_xref="CDD:226943"
+ misc_feature complement(866362..866616)
+ /locus_tag="SARI_00849"
+ /note="1,2-propanediol utilization protein A (PduA),
+ Bacterial Micro-Compartment (BMC) domain; Region:
+ BMC_PduA; cd07059"
+ /db_xref="CDD:132899"
+ misc_feature complement(order(866380..866382,866389..866394,
+ 866398..866400,866404..866412,866503..866511,
+ 866518..866520,866533..866535,866551..866556,
+ 866563..866565,866590..866592,866599..866601))
+ /locus_tag="SARI_00849"
+ /note="Hexamer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:132899"
+ misc_feature complement(866518..866520)
+ /locus_tag="SARI_00849"
+ /note="Putative hexagonal pore residue; other site"
+ /db_xref="CDD:132899"
+ gene 867153..867986
+ /locus_tag="SARI_00850"
+ CDS 867153..867986
+ /locus_tag="SARI_00850"
+ /inference="protein motif:BlastProDom:IPR000425"
+ /inference="protein motif:Gene3D:IPR000425"
+ /inference="protein motif:HMMPanther:IPR000425"
+ /inference="protein motif:HMMPfam:IPR000425"
+ /inference="protein motif:HMMTigr:IPR012269"
+ /inference="protein motif:ScanRegExp:IPR000425"
+ /inference="protein motif:superfamily:IPR000425"
+ /inference="similar to AA sequence:REFSEQ:YP_217032.1"
+ /note="'KEGG: fal:FRAAL3366 6.9e-05 putative arsenate
+ reductase (partial match);
+ COG: COG0580 Glycerol uptake facilitator and related
+ permeases (Major Intrinsic Protein Family);
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569911.2"
+ /db_xref="GI:448236209"
+ /db_xref="InterPro:IPR000425"
+ /db_xref="InterPro:IPR012269"
+ /translation="MNDSLKAQCGAEFLGTGLFLFFGIGCLSALKVAGASLGLWEICI
+ IWGLGISLAVYLTAGISGGHLNPAVTIALWLFACFPRQKVLPYIIAQVAGAFGGALLA
+ YVLYSSLFTEFETAHHMVRGSVESLQLASIFSTYPAAALNVWQAALVEVVITSILMGM
+ IMALTDDGNGVPKGPLAPLLIGILVAVIGASTGPLTGFAMNPARDFGPKLFTWLAGWG
+ NMAMSGGRESPYFIVPIVAPVIGACAGAAIYRYFIGKNLPCNRCKPEENANQIHSNDV
+ S"
+ misc_feature 867249..867908
+ /locus_tag="SARI_00850"
+ /note="Major intrinsic protein (MIP) superfamily. Members
+ of the MIP superfamily function as membrane channels that
+ selectively transport water, small neutral molecules, and
+ ions out of and between cells. The channel proteins share
+ a common fold: the N-terminal...; Region: MIP; cd00333"
+ /db_xref="CDD:238204"
+ misc_feature order(867288..867290,867342..867350,867741..867746,
+ 867753..867755,867762..867764)
+ /locus_tag="SARI_00850"
+ /note="amphipathic channel; other site"
+ /db_xref="CDD:238204"
+ misc_feature order(867348..867356,867753..867761)
+ /locus_tag="SARI_00850"
+ /note="Asn-Pro-Ala signature motifs; other site"
+ /db_xref="CDD:238204"
+ gene 868164..869075
+ /locus_tag="SARI_00851"
+ CDS 868164..869075
+ /locus_tag="SARI_00851"
+ /inference="protein motif:FPrintScan:IPR000005"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR000005"
+ /inference="protein motif:HMMSmart:IPR000005"
+ /inference="protein motif:ScanRegExp:IPR000005"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:INSD:AAL20940.1"
+ /note="'KEGG: bsu:BG10166 1.4e-12 adaA;
+ methylphosphotriester-DNA alkyltransferase /
+ transcriptional regulator (AraC family) K00567;
+ COG: COG4753 Response regulator containing CheY-like
+ receiver domain and AraC-type DNA-binding domain;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569912.1"
+ /db_xref="GI:161502800"
+ /db_xref="InterPro:IPR000005"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /translation="MISASALNSELINKIAQDFAQATGLAVVVVNIHGDEISELFNFT
+ PFCQLMRQHPQHSTRCRMSDRCGGLEASKSDQPCIYRCHAGLTDFSIPLVIAGHLVGF
+ VLCGQVRLSNDVELVDILNVDDRWQADPELLNEFRNVPEMDYSRVIASADLLKLIVEN
+ CLKKQLNFVVIKDNPQQSEANKTARGPSPHDSKMKKALRYIDAHLSDDLRLEDVASHV
+ YLSPYYFSKLFKKYQGIGFNAWVNRQRMVSARELLCHSGWSIASIARNLGFSQTSYFC
+ KVFRQTYQITPQAYRQQINESSRPPSI"
+ misc_feature 868164..868670
+ /locus_tag="SARI_00851"
+ /note="Predicted sensor domain [Signal transduction
+ mechanisms / Transcription]; Region: PocR; COG4936"
+ /db_xref="CDD:227272"
+ misc_feature 868182..868682
+ /locus_tag="SARI_00851"
+ /note="Sensory domain found in PocR; Region: PocR;
+ pfam10114"
+ /db_xref="CDD:220579"
+ misc_feature 868764..868889
+ /locus_tag="SARI_00851"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ misc_feature 868785..869036
+ /locus_tag="SARI_00851"
+ /note="helix_turn_helix, arabinose operon control protein;
+ Region: HTH_ARAC; smart00342"
+ /db_xref="CDD:197666"
+ misc_feature 868926..869039
+ /locus_tag="SARI_00851"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ gene complement(869017..869178)
+ /locus_tag="SARI_00852"
+ CDS complement(869017..869178)
+ /locus_tag="SARI_00852"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569913.1"
+ /db_xref="GI:161502801"
+ /translation="MLRYDNLLSHQIHFLSEMIQIQTLSKIGNSKILLFISMEGENSH
+ LSAGGKPAV"
+ misc_feature 869401..869576
+ /inference="nucleotide motif:Rfam:RF00174"
+ /note="cobalamin riboswitch"
+ gene 869673..871052
+ /locus_tag="SARI_00853"
+ CDS 869673..871052
+ /locus_tag="SARI_00853"
+ /inference="protein motif:HMMPfam:IPR002586"
+ /inference="protein motif:HMMPfam:IPR011698"
+ /inference="protein motif:HMMTigr:IPR004484"
+ /inference="similar to AA sequence:INSD:AAL20939.1"
+ /note="responsible for the amidation of carboxylic groups
+ at position A and C of cobyrinic acid or hydrogenobrynic
+ acid"
+ /codon_start=1
+ /transl_table=11
+ /product="cobyrinic acid a,c-diamide synthase"
+ /protein_id="YP_001569914.1"
+ /db_xref="GI:161502802"
+ /db_xref="InterPro:IPR002586"
+ /db_xref="InterPro:IPR004484"
+ /db_xref="InterPro:IPR011698"
+ /translation="MAARHHAFILAGTGSGCGKTTVTLGLLRLLQKRALRVQPFKVGP
+ DYLDTGWHTAICGVASRNLDSFMLPPPVLNALFCEQMRQADIAVIEGVMGLYDGYGVD
+ PNYCSTAAMAKQLGCPVILLVDGKAVSTSLAATVMGFQQFDPTLNLAGVIVNRVNSEA
+ HYQLLKNAIEHYCSLPVLGYAPPCDGVALPERHLGLITAKESFVNQQSWHEFAVTLEQ
+ TLDVDALLSLSLLSALPAGIWPERPGKTAGAGLTLALADDEAFNFYYPDNIDLLERTG
+ VEIVRFSPLHDRVLPDCQMIWLGGGYPELYAADLAANTMMLKHLRAAHQRGAAIYAEC
+ GGLMYLGSTLEDSGGEIHQMADIIPGHSKMSKRLTRFGYCEARAMQPTLLAAPGEIVR
+ GHEFHYSDFIPETPAVMACRKVRDGRVLQEWTGGWQTGNTFASYLHVHFAQRPEMLLH
+ WLAAARRVS"
+ misc_feature 869691..871046
+ /locus_tag="SARI_00853"
+ /note="cobyrinic acid a,c-diamide synthase; Validated;
+ Region: PRK01077"
+ /db_xref="CDD:234896"
+ misc_feature <869874..870245
+ /locus_tag="SARI_00853"
+ /note="dithiobiotin synthetase; Reviewed; Region: bioD;
+ PRK00090"
+ /db_xref="CDD:234625"
+ misc_feature 870444..871028
+ /locus_tag="SARI_00853"
+ /note="Type 1 glutamine amidotransferase (GATase1) domain
+ found in Cobyrinic Acid a,c-Diamide Synthase; Region:
+ GATase1_CobB; cd03130"
+ /db_xref="CDD:153224"
+ misc_feature order(870672..870674,870990..870992,870996..870998)
+ /locus_tag="SARI_00853"
+ /note="catalytic triad [active]"
+ /db_xref="CDD:153224"
+ gene 871049..872008
+ /gene="cbiB"
+ /locus_tag="SARI_00854"
+ CDS 871049..872008
+ /gene="cbiB"
+ /locus_tag="SARI_00854"
+ /inference="protein motif:HMMPfam:IPR004485"
+ /inference="protein motif:HMMTigr:IPR004485"
+ /inference="similar to AA sequence:REFSEQ:YP_217029.1"
+ /note="CobD; CbiB in Salmonella; converts cobyric acid to
+ cobinamide by the addition of aminopropanol on the F
+ carboxylic group"
+ /codon_start=1
+ /transl_table=11
+ /product="cobalamin biosynthesis protein"
+ /protein_id="YP_001569915.1"
+ /db_xref="GI:161502803"
+ /db_xref="InterPro:IPR004485"
+ /translation="MTILAWCIAWVLDFIIGDPQHWPHPVRWIGRLITFVQHIVRRYC
+ HSDKALRIGGGVMWIVVVGATWGMAWGVLALAQRIHPWLGWSVEVWMIFTVLAGRSLA
+ RAAQDVERPLRENDLAESRIKLSWIVGRDTSQLQPEQINRAVVETVAENTVDGIIAPL
+ FFLFLGGAPLAMAYKAVNTLDSMVGYKHEKYRAIGMVSARMDDVANYLPARLSWLLLG
+ IAAGLCRLSGWRALRIGWRDRYNHSSPNCAWSEACVAGALGIQLGGPNNYFGERVDKP
+ WIGDAQRDISVDDISRTIRLMWGASTLALALFIAARCWLSGVA"
+ misc_feature 871049..871993
+ /gene="cbiB"
+ /locus_tag="SARI_00854"
+ /note="cobalamin biosynthesis protein; Provisional;
+ Region: cobD; PRK01209"
+ /db_xref="CDD:234919"
+ gene 872019..872651
+ /gene="cbiC"
+ /locus_tag="SARI_00855"
+ CDS 872019..872651
+ /gene="cbiC"
+ /locus_tag="SARI_00855"
+ /inference="protein motif:HMMPfam:IPR003722"
+ /inference="protein motif:HMMPIR:IPR012054"
+ /inference="similar to AA sequence:SwissProt:Q05601"
+ /note="catalyzes the interconversion of
+ cobalt-precorrin-8X and cobyrinic acid in the anaerobic
+ biosynthesis of cobalamin"
+ /codon_start=1
+ /transl_table=11
+ /product="cobalt-precorrin-8X methylmutase"
+ /protein_id="YP_001569916.1"
+ /db_xref="GI:161502804"
+ /db_xref="InterPro:IPR003722"
+ /db_xref="InterPro:IPR012054"
+ /translation="MHYIQQPQTIEANSFTIISDIIRETRPDYCFASPLHEAIIKRVI
+ HTTADFDWLDILWFSADALEQLCDALRHPCIIYTDTTMALSGINKRLLATFGGECRCY
+ ISDPRVVRAAKTQGMTRSMAAVDIAIAEEEKNKLFVFGNAPTALFRLLEHNVTVSGVV
+ GVPVGFVGAAESKEALTHSHFPAIAALGRKGGSNVAAAIVNALLYHLREA"
+ misc_feature 872019..872648
+ /gene="cbiC"
+ /locus_tag="SARI_00855"
+ /note="cobalt-precorrin-8X methylmutase; Validated;
+ Region: cbiC; PRK08286"
+ /db_xref="CDD:181353"
+ misc_feature 872046..872642
+ /gene="cbiC"
+ /locus_tag="SARI_00855"
+ /note="Precorrin-8X methylmutase; Region: CbiC; pfam02570"
+ /db_xref="CDD:217111"
+ gene 872651..873790
+ /gene="cbiD"
+ /locus_tag="SARI_00856"
+ CDS 872651..873790
+ /gene="cbiD"
+ /locus_tag="SARI_00856"
+ /inference="protein motif:HMMPfam:IPR002748"
+ /inference="protein motif:HMMTigr:IPR002748"
+ /inference="similar to AA sequence:INSD:AAX65946.1"
+ /note="Catalyzes the methylation of C-1 in
+ cobalt-precorrin-5 and the subsequent extrusion of acetic
+ acid from the resulting intermediate to form
+ cobalt-precorrin-6A"
+ /codon_start=1
+ /transl_table=11
+ /product="cobalt-precorrin-6A synthase"
+ /protein_id="YP_001569917.1"
+ /db_xref="GI:161502805"
+ /db_xref="InterPro:IPR002748"
+ /translation="MSELSFDAPVWHHGKALRKGYTTGSCATAAAKVAALMVLRQHLI
+ HQVSIVTPSGVTLCLNVESPHIEGQQAIAAIRKDGGDDVDATHGMLIFARVTLNDSGE
+ ITLTGGEGIGTVTRKGVGLPLGSAAINRTPRHTIESAVREAIGPARGADVEIFAPEGE
+ ARAQKTYNSRLGILGGISIIGTTGIVTPMSEESWKRSLSLELEIKRASGLMRVILVPG
+ NHGERFVREQMGVDTQAVVTMSNFVGYMIEEAVRLGFRQIVLVGHPGKLIKIAAGIFH
+ THSHIADARMETLVAHLALLGAPLELLTLVGDCDTTEAAMEHIEAYGFGHIYNHLAKR
+ ICWRVMQMLRFTKTPPVCDAILFSFDNHILGSNRPVDEIAKELQC"
+ misc_feature 872678..873769
+ /gene="cbiD"
+ /locus_tag="SARI_00856"
+ /note="cobalt-precorrin-6A synthase; Reviewed; Region:
+ cbiD; PRK00075"
+ /db_xref="CDD:234615"
+ gene 873784..874389
+ /locus_tag="SARI_00857"
+ CDS 873784..874389
+ /locus_tag="SARI_00857"
+ /inference="protein motif:HMMPfam:IPR000878"
+ /inference="protein motif:HMMPIR:IPR012059"
+ /inference="protein motif:HMMTigr:IPR012818"
+ /inference="protein motif:superfamily:IPR000878"
+ /inference="similar to AA sequence:INSD:AAL20935.1"
+ /note="catalyzes the methylation of C-5 in
+ cobalt-precorrin-6Y to form cobalt-precorrin-7W-a"
+ /codon_start=1
+ /transl_table=11
+ /product="cobalt-precorrin-6Y C(5)-methyltransferase"
+ /protein_id="YP_001569918.1"
+ /db_xref="GI:161502806"
+ /db_xref="InterPro:IPR000878"
+ /db_xref="InterPro:IPR012059"
+ /db_xref="InterPro:IPR012818"
+ /translation="MLTVVGMGPAGRHLMTPAALEAIDHADALAGGKRHLAQFPTFGG
+ ERFTLGADIGALLFWIAARRDKGIVVLASGDPLFYGIGTRMVAHFGIEQVRIIPGISA
+ VQYLCAQAGIDMNDMWLTSSHGRCVSFEQLASHRKVAMVTDARCGPREIARELVARGK
+ GHRLMVIGENLAMENERIHWLPVSAVNADYEMNAVVILDER"
+ misc_feature 873787..874377
+ /locus_tag="SARI_00857"
+ /note="Precorrin-6Y methyltransferase, the cobalamin
+ biosynthesis enzyme CbiE; Region: Precorrin-6Y-methylase;
+ cd11644"
+ /db_xref="CDD:212503"
+ misc_feature order(873808..873810,873883..873885,874000..874008,
+ 874015..874023,874084..874089,874144..874146,
+ 874201..874206,874285..874287,874291..874296,
+ 874357..874365)
+ /locus_tag="SARI_00857"
+ /note="active site"
+ /db_xref="CDD:212503"
+ misc_feature order(873826..873837,873841..873843,874006..874023,
+ 874030..874035,874039..874044,874069..874071,
+ 874075..874086,874090..874095,874102..874107,
+ 874132..874146)
+ /locus_tag="SARI_00857"
+ /note="putative homodimer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:212503"
+ misc_feature order(873883..873885,874000..874008,874015..874020,
+ 874084..874089,874204..874209,874285..874287,
+ 874291..874296,874357..874365)
+ /locus_tag="SARI_00857"
+ /note="SAM binding site [chemical binding]; other site"
+ /db_xref="CDD:212503"
+ gene 874379..874948
+ /locus_tag="SARI_00858"
+ CDS 874379..874948
+ /locus_tag="SARI_00858"
+ /inference="protein motif:HMMPfam:IPR013217"
+ /inference="protein motif:HMMPIR:IPR012376"
+ /inference="protein motif:HMMTigr:IPR014008"
+ /inference="similar to AA sequence:SwissProt:Q05632"
+ /note="catalyzes the methylation of either C-15 or C-5 in
+ cobalt-precorrin-6Y to form cobalt-precorrin-7W;
+ decarboxylating"
+ /codon_start=1
+ /transl_table=11
+ /product="cobalt-precorrin-6Y C(15)-methyltransferase"
+ /protein_id="YP_001569919.1"
+ /db_xref="GI:161502807"
+ /db_xref="InterPro:IPR012376"
+ /db_xref="InterPro:IPR013217"
+ /db_xref="InterPro:IPR014008"
+ /translation="MKDELFLRGENVPMTKEAVRALALSKLELHRASHLIDVGAGTGS
+ VSIEAALQFPSLQVTAIERNPAALRLLDENRQRFACGNIDILPGEAPMTITGKADAVF
+ MGGSGGHLTALIDWAMGHLHPGGRLVMTFILQENLHSALVHLARIGACRMDCVQLQLS
+ SLTPLGAGHYFKPNNPVFVIACQKEENHV"
+ misc_feature 874379..874939
+ /locus_tag="SARI_00858"
+ /note="cobalt-precorrin-6Y C(15)-methyltransferase;
+ Validated; Region: PRK08287"
+ /db_xref="CDD:181354"
+ misc_feature 874481..874777
+ /locus_tag="SARI_00858"
+ /note="S-adenosylmethionine-dependent methyltransferases
+ (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
+ that use S-adenosyl-L-methionine (SAM or AdoMet) as a
+ substrate for methyltransfer, creating the product
+ S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
+ cd02440"
+ /db_xref="CDD:100107"
+ misc_feature order(874490..874510,874562..874567,874640..874642,
+ 874688..874690)
+ /locus_tag="SARI_00858"
+ /note="S-adenosylmethionine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:100107"
+ gene 874941..875714
+ /locus_tag="SARI_00859"
+ CDS 874941..875714
+ /locus_tag="SARI_00859"
+ /inference="protein motif:HMMPfam:IPR000878"
+ /inference="protein motif:HMMPIR:IPR012306"
+ /inference="protein motif:HMMTigr:IPR006362"
+ /inference="protein motif:ScanRegExp:IPR003043"
+ /inference="protein motif:superfamily:IPR000878"
+ /inference="similar to AA sequence:INSD:AAA27258.1"
+ /note="'KEGG: stm:STM2029 8.7e-133 cbiF; precorrin-4
+ C11-methyltransferase K03396;
+ COG: COG2875 Precorrin-4 methylase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569920.1"
+ /db_xref="GI:161502808"
+ /db_xref="InterPro:IPR000878"
+ /db_xref="InterPro:IPR003043"
+ /db_xref="InterPro:IPR006362"
+ /db_xref="InterPro:IPR012306"
+ /translation="MSETFDPRCVWFVGAGPGDRELITLKGYRLLQQAQVVIYAGSLI
+ NTELLDYCPAQAERYDSAELHLEQIIELMAAGVKAGKTVVRLQTGDVSLYGSVREQGE
+ ELTRRGIDWQVVPGVSAFLGAAAELGVEYTVPEVSQSLIITRLEGRTPVPAREQLEAF
+ ASHQTSMAIYLSVQRIHRVAERLIAGGYPATTPVVVIYKATWPESQTVRGTLADISDK
+ VRDAGIRKTALILVGNFLGKEYHYSRLYAADFSHEYRKA"
+ misc_feature 874968..875651
+ /locus_tag="SARI_00859"
+ /note="Precorrin-4 C11-methyltransferase (CbiF/CobM);
+ Region: Precorrin-4_C11-MT; cd11641"
+ /db_xref="CDD:212500"
+ misc_feature order(874989..874991,875202..875210,875217..875225,
+ 875292..875297,875370..875372,875445..875450,
+ 875529..875531,875535..875540,875622..875627)
+ /locus_tag="SARI_00859"
+ /note="active site"
+ /db_xref="CDD:212500"
+ misc_feature order(874989..874991,875067..875069,875202..875210,
+ 875217..875219,875292..875297,875445..875453,
+ 875529..875531,875535..875540,875619..875627)
+ /locus_tag="SARI_00859"
+ /note="SAM binding site [chemical binding]; other site"
+ /db_xref="CDD:212500"
+ misc_feature order(874995..874997,875001..875018,875022..875024,
+ 875136..875138,875208..875237,875241..875246,
+ 875253..875255,875277..875279,875283..875294,
+ 875298..875303,875310..875315,875322..875324,
+ 875328..875336,875346..875372,875391..875396,
+ 875400..875405,875415..875420,875424..875429)
+ /locus_tag="SARI_00859"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:212500"
+ gene 875695..876750
+ /locus_tag="SARI_00860"
+ CDS 875695..876750
+ /locus_tag="SARI_00860"
+ /inference="protein motif:HMMPfam:IPR002750"
+ /inference="protein motif:HMMPIR:IPR012407"
+ /inference="similar to AA sequence:INSD:AAV76831.1"
+ /note="catalyzes the formation of cobalt-precorrin 4 from
+ cobalt-precorrin 3"
+ /codon_start=1
+ /transl_table=11
+ /product="cobalamin biosynthesis protein CbiG"
+ /protein_id="YP_001569921.1"
+ /db_xref="GI:161502809"
+ /db_xref="InterPro:IPR002750"
+ /db_xref="InterPro:IPR012407"
+ /translation="MNTVKPESIALFCLTPGGVALAKRLAAMLPLTCFTSEKLREEGF
+ IPFDGGFANTARQAFTTYTALIFIGATGIAVRVLAPLVNDKFSDPAVVVIDERGQHVI
+ SLLSGHAGGANALTRYLAGMLGADPVITTATDVNEMSALDTLAFQLNARMTDLRTAVK
+ TVNQMLVSHQRVGLWWDAELTEEIGQCDIRGFIPVDDLQRLPELDALICVSLRNDLPE
+ LSVLHWKLVPQRVVAGIGCRRDTPFPLLATLLARQLEAQKLDPLALKAIGSVTLKKGE
+ PGLIQLASCCRVPFKTFTAEALREFEHHFPGSGFVRKTVGVGSVSGPAAWLLSQGQLL
+ GETLREQGVTITLGVAH"
+ misc_feature 875704..876747
+ /locus_tag="SARI_00860"
+ /note="cobalamin biosynthesis protein CbiG; Validated;
+ Region: PRK05788"
+ /db_xref="CDD:235610"
+ misc_feature 875860..876096
+ /locus_tag="SARI_00860"
+ /note="Cobalamin synthesis G N-terminal; Region: CbiG_N;
+ pfam11760"
+ /db_xref="CDD:221211"
+ misc_feature 876112..876366
+ /locus_tag="SARI_00860"
+ /note="Cobalamin biosynthesis central region; Region:
+ CbiG_mid; pfam11761"
+ /db_xref="CDD:221212"
+ misc_feature 876385..876741
+ /locus_tag="SARI_00860"
+ /note="Cobalamin synthesis G C-terminus; Region: CbiG_C;
+ pfam01890"
+ /db_xref="CDD:216767"
+ gene 876750..877475
+ /locus_tag="SARI_00861"
+ CDS 876750..877475
+ /locus_tag="SARI_00861"
+ /inference="protein motif:HMMPfam:IPR000878"
+ /inference="protein motif:HMMPIR:IPR012057"
+ /inference="protein motif:HMMTigr:IPR006363"
+ /inference="protein motif:superfamily:IPR000878"
+ /inference="similar to AA sequence:REFSEQ:YP_217022.1"
+ /note="'KEGG: sec:SC2035 1.0e-122 cbiH; synthesis of
+ vitamin B12 adenosyl cobalamide precursor K03395;
+ COG: COG1010 Precorrin-3B methylase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="precorrin-3B C17-methyltransferase"
+ /protein_id="YP_001569922.1"
+ /db_xref="GI:161502810"
+ /db_xref="InterPro:IPR000878"
+ /db_xref="InterPro:IPR006363"
+ /db_xref="InterPro:IPR012057"
+ /translation="MLSVIGIGPGSQAMMTMEAIDALQAAEIVVGYKTYTHLVKAFTG
+ DKQVIKTGMCKEIERCQAAIELAQAGHNVALISSGDAGIYGMAGLVLELVGKQKLDVE
+ VRLIPGMTASIAAASLLGAPLMHDFCHISLSDLLTPWPVIEKRIVAAGEADFVICFYN
+ PRSRGREGHLARAFDLLAASKSAQTPVGVVKSAGRKKEEKWLATLGDMDFEPVDMTSL
+ VIVGNKTTYVQDGLMIKPRGYTL"
+ misc_feature 876753..877466
+ /locus_tag="SARI_00861"
+ /note="Precorrin-3B C(17)-methyltransferase (CobJ/CbiH);
+ Region: Precorrin_3B_C17_MT; cd11646"
+ /db_xref="CDD:212505"
+ misc_feature order(876774..876776,876981..876989,876996..877004,
+ 877077..877082,877140..877142,877221..877226,
+ 877317..877319,877323..877328,877398..877403)
+ /locus_tag="SARI_00861"
+ /note="active site"
+ /db_xref="CDD:212505"
+ misc_feature order(876774..876776,876981..876989,876996..877001,
+ 877077..877082,877092..877094,877224..877232,
+ 877317..877319,877323..877328,877332..877334,
+ 877392..877403)
+ /locus_tag="SARI_00861"
+ /note="SAM binding site [chemical binding]; other site"
+ /db_xref="CDD:212505"
+ misc_feature order(876780..876782,876792..876803,876987..876989,
+ 876993..877001,877011..877013,877020..877025,
+ 877056..877058,877062..877064,877068..877079,
+ 877086..877088,877107..877112,877116..877142,
+ 877179..877181,877206..877211,877416..877418,
+ 877428..877433,877443..877445,877449..877451,
+ 877458..877460)
+ /locus_tag="SARI_00861"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:212505"
+ gene 877472..878263
+ /locus_tag="SARI_00862"
+ CDS 877472..878263
+ /locus_tag="SARI_00862"
+ /inference="protein motif:HMMPfam:IPR003723"
+ /inference="protein motif:HMMTigr:IPR003723"
+ /inference="similar to AA sequence:SwissProt:Q05591"
+ /note="'CobK/CbiJ; there are 2 pathways for cobalamin
+ (vitamin B12) production, one aerobic (ex. P.
+ denitrificans), the other anaerobic (ex. S. typhimurium);
+ the CobK/CbiJ perform similar reactions in both; the
+ anaerobic pathway includes the use of a chelated cobalt
+ ion in order for ring contraction to occur; CobK thus
+ converts precorrin 6 into dihydro-precorrin 6 while CbiJ
+ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin
+ 6'"
+ /codon_start=1
+ /transl_table=11
+ /product="cobalt-precorrin-6x reductase"
+ /protein_id="YP_001569923.1"
+ /db_xref="GI:161502811"
+ /db_xref="InterPro:IPR003723"
+ /translation="MNEGKVLVVGGTSDARALCRQLDAANVAYTLSVATAAGKQLAGD
+ IKGQVRCGRLEYGQMVAWLKENRTRWVIDASHPYAEMVSHNLLRACETAGVLLSRYQR
+ PEQLSNLTHPLLYTARSIADACEIARRFGPRVLLTTGSKDLAVWRAGLAEKTLLARVL
+ PVAEVIQRCSELGFGVGEIFALCGPFSADFNAAFYHQCRADVVITKASGAEGGYQEKV
+ QPCLDAGIPCIVIARPTPLVTGDELLESQAAFAQRLSRWLAAAKE"
+ misc_feature 877475..878251
+ /locus_tag="SARI_00862"
+ /note="Precorrin-6x reductase [Coenzyme metabolism];
+ Region: CobK; COG2099"
+ /db_xref="CDD:225010"
+ misc_feature 877475..878248
+ /locus_tag="SARI_00862"
+ /note="cobalt-precorrin-6x reductase; Reviewed; Region:
+ PRK08057"
+ /db_xref="CDD:236144"
+ gene 878266..879060
+ /locus_tag="SARI_00863"
+ CDS 878266..879060
+ /locus_tag="SARI_00863"
+ /inference="protein motif:HMMPfam:IPR010388"
+ /inference="protein motif:HMMPIR:IPR010388"
+ /inference="protein motif:ScanRegExp:IPR000223"
+ /inference="similar to AA sequence:REFSEQ:YP_217020.1"
+ /note="'KEGG: sec:SC2033 5.0e-137 cbiK; synthesis of
+ vitamin B12 adenosyl cobalamide precursor K02190;
+ COG: COG4822 Cobalamin biosynthesis protein CbiK, Co2+
+ chelatase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569924.1"
+ /db_xref="GI:161502812"
+ /db_xref="InterPro:IPR000223"
+ /db_xref="InterPro:IPR010388"
+ /translation="MKKALLVVSFGTSYHDTCEKNIVACERDLAASCPDRDLFRAFTS
+ GMIIRKLRQRDGIDIDTPLQALQKLAAQGYQDVAIQSLHIINGDEHEKIVREVQILRP
+ LFTRLTLGVPLLSSHNDYVQLMQALRQQIPSLRQTEKVVFMGHGASHHAFAAYACLDH
+ MMTAQRFPARVGAVESYPEVDILIDSLRDEGVTGVHLMPLMLVAGDHAINDMASDDGD
+ SWKMRFNAAGIPATPWLSGLGENPAIRAMFVAHLRQALNMAVEEAA"
+ misc_feature 878266..879057
+ /locus_tag="SARI_00863"
+ /note="Cobalamin biosynthesis protein CbiK, Co2+ chelatase
+ [Coenzyme metabolism]; Region: CbiK; COG4822"
+ /db_xref="CDD:227159"
+ misc_feature 878272..878658
+ /locus_tag="SARI_00863"
+ /note="Anaerobic cobalamin biosynthetic cobalt chelatase
+ (CbiK), N-terminal domain. CbiK is part of the
+ cobalt-early path for cobalamin biosynthesis. It catalyzes
+ the insertion of cobalt into the oxidized form of
+ precorrin-2, factor II (sirohydrochlorin), the...; Region:
+ CbiK_N; cd03412"
+ /db_xref="CDD:239505"
+ misc_feature order(878293..878295,878305..878307,878530..878532)
+ /locus_tag="SARI_00863"
+ /note="active site"
+ /db_xref="CDD:239505"
+ misc_feature order(878305..878307,878323..878328,878515..878517,
+ 878524..878529,878623..878625,878635..878637,
+ 878647..878649,878653..878658)
+ /locus_tag="SARI_00863"
+ /note="C-terminal domain interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:239505"
+ misc_feature 878677..878982
+ /locus_tag="SARI_00863"
+ /note="Anaerobic cobalamin biosynthetic cobalt chelatase
+ (CbiK), C-terminal domain. CbiK is part of the
+ cobalt-early path for cobalamin biosynthesis. It catalyzes
+ the insertion of cobalt into the oxidized form of
+ precorrin-2, factor II (sirohydrochlorin), the...; Region:
+ CbiK_C; cd03413"
+ /db_xref="CDD:239506"
+ misc_feature order(878698..878700,878710..878712,878884..878886)
+ /locus_tag="SARI_00863"
+ /note="active site"
+ /db_xref="CDD:239506"
+ misc_feature order(878713..878715,878725..878727,878737..878739,
+ 878863..878871,878875..878877,878881..878883,
+ 878974..878976,878980..878982)
+ /locus_tag="SARI_00863"
+ /note="N-terminal domain interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:239506"
+ gene 879057..879761
+ /locus_tag="SARI_00864"
+ CDS 879057..879761
+ /locus_tag="SARI_00864"
+ /inference="protein motif:HMMPfam:IPR000878"
+ /inference="protein motif:HMMPIR:IPR012382"
+ /inference="protein motif:HMMTigr:IPR006364"
+ /inference="protein motif:ScanRegExp:IPR003043"
+ /inference="protein motif:superfamily:IPR000878"
+ /inference="similar to AA sequence:INSD:AAL20928.1"
+ /note="catalyzes the formation of precorrin-3A from
+ precorrin-2"
+ /codon_start=1
+ /transl_table=11
+ /product="cobalt-precorrin-2 C(20)-methyltransferase"
+ /protein_id="YP_001569925.1"
+ /db_xref="GI:161502813"
+ /db_xref="InterPro:IPR000878"
+ /db_xref="InterPro:IPR003043"
+ /db_xref="InterPro:IPR006364"
+ /db_xref="InterPro:IPR012382"
+ /translation="MNGKLYALSTGPGAPDLITVRAARILGSLDILYAPAGRKGGDSL
+ ALSIVRDYLGEQTEVRCCHFPMSADSAEKEAVWNEVAAALTAEVEAGKQVGFITLGDA
+ MLFSTWIFLLQRIGCPTWLEIIPGVTSFAAIAARAKMPLAIERQSLAVISCTAPEAEI
+ AQALQQHDSLVLMKVYGRFARIKALLAQAGLLEFALMMSEATLPGEQCWRHLHEVNDD
+ RPLPYFSTILVNKQWE"
+ misc_feature 879066..879743
+ /locus_tag="SARI_00864"
+ /note="Precorrin-2 C20-methyltransferase, also named CobI
+ or CbiL; Region: Precorrin_2_C20_MT; cd11645"
+ /db_xref="CDD:212504"
+ misc_feature order(879090..879092,879351..879359,879366..879374,
+ 879438..879443,879510..879512,879570..879575,
+ 879648..879650,879654..879659,879729..879734)
+ /locus_tag="SARI_00864"
+ /note="active site"
+ /db_xref="CDD:212504"
+ misc_feature order(879090..879092,879351..879359,879366..879374,
+ 879438..879443,879453..879455,879573..879578,
+ 879648..879650,879654..879659,879723..879734)
+ /locus_tag="SARI_00864"
+ /note="SAM binding site [chemical binding]; other site"
+ /db_xref="CDD:212504"
+ misc_feature order(879099..879119,879357..879371,879381..879386,
+ 879390..879392,879423..879425,879429..879437,
+ 879444..879452,879456..879461,879468..879479,
+ 879492..879506,879510..879512,879558..879560)
+ /locus_tag="SARI_00864"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:212504"
+ gene 879767..880504
+ /locus_tag="SARI_00865"
+ CDS 879767..880504
+ /locus_tag="SARI_00865"
+ /inference="protein motif:BlastProDom:IPR002751"
+ /inference="protein motif:HMMPfam:IPR002751"
+ /inference="protein motif:HMMTigr:IPR002751"
+ /inference="similar to AA sequence:INSD:AAL20927.1"
+ /note="catalyzes the ATP-dependent transport of cobalt"
+ /codon_start=1
+ /transl_table=11
+ /product="cobalt transport protein CbiM"
+ /protein_id="YP_001569926.1"
+ /db_xref="GI:161502814"
+ /db_xref="InterPro:IPR002751"
+ /translation="MKLEQQLRQLSFSGLAAALLLMVVPEQAFAMHIMEGFLPPVWAL
+ AWWLLFLPCLWYGLVRLRRIVQEDNHQKVLLALCGAFIFVLSALKIPSVTGSCSHPTG
+ VGLAVILFGPGVVAILGAVVLLFQALLLAHGGLTTLGANGMSMAVIGPVVGYLVWKMA
+ CRAGLRRDVAVFLCAMLADLATYFVTSVQLGVAFPDPHAGATGSVVKFMGIFCLTQIA
+ VAIAEGLLTVMIYDQLTKRQVITVQGH"
+ misc_feature 879857..880501
+ /locus_tag="SARI_00865"
+ /note="cobalt transport protein CbiM; Validated; Region:
+ PRK08319"
+ /db_xref="CDD:181384"
+ misc_feature 879860..880480
+ /locus_tag="SARI_00865"
+ /note="Cobalt uptake substrate-specific transmembrane
+ region; Region: CbiM; pfam01891"
+ /db_xref="CDD:216768"
+ gene 880506..880787
+ /locus_tag="SARI_00866"
+ CDS 880506..880787
+ /locus_tag="SARI_00866"
+ /inference="protein motif:HMMPfam:IPR003705"
+ /inference="protein motif:HMMTigr:IPR003705"
+ /inference="similar to AA sequence:SwissProt:Q05595"
+ /note="periplasmic cobalt binding component of the cobalt
+ transport system"
+ /codon_start=1
+ /transl_table=11
+ /product="cobalt transport protein CbiN"
+ /protein_id="YP_001569927.1"
+ /db_xref="GI:161502815"
+ /db_xref="InterPro:IPR003705"
+ /translation="MKKTLMLLAMVVALVILPFFINHGGEYGGSDGEAESQIQAIAPH
+ YKPWFQPLYEPASGEIESLLFTLQGSLGAAVIFYILGYCKGKQRRDDRA"
+ misc_feature 880506..880784
+ /locus_tag="SARI_00866"
+ /note="cobalt transport protein CbiN; Provisional; Region:
+ PRK02898"
+ /db_xref="CDD:179494"
+ gene 880774..881451
+ /locus_tag="SARI_00867"
+ CDS 880774..881451
+ /locus_tag="SARI_00867"
+ /inference="protein motif:HMMPfam:IPR003339"
+ /inference="protein motif:HMMTigr:IPR012809"
+ /inference="similar to AA sequence:INSD:AAO68537.1"
+ /note="'COG: COG0619 ABC-type cobalt transport system,
+ permease component CbiQ and related transporters;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569928.1"
+ /db_xref="GI:161502816"
+ /db_xref="InterPro:IPR003339"
+ /db_xref="InterPro:IPR012809"
+ /translation="MTGLDRLSYQSRWVHVAPQRKFLLWLAMMIQAFVLPPVGQGIEL
+ LIIAGLSCWLLRISLWRWCRWMAIPFGFLLVGVITIIFSISREPQMLLAGISVGPYWI
+ GITRAGVVTANETFWRSLTALAATLWLVMNLPFPQLISLLKRAHVPRLLTEQILLTWR
+ FIFILLDEAVAIRRAQTLRFGYCSLPKGYRSLAMLVGLLFTRVLMRYRQMTTTLDIKL
+ YQGDFHL"
+ misc_feature 880774..881448
+ /locus_tag="SARI_00867"
+ /note="cobalt transport protein CbiQ; Provisional; Region:
+ PRK15485"
+ /db_xref="CDD:185382"
+ gene 881460..882275
+ /gene="cbiO"
+ /locus_tag="SARI_00868"
+ CDS 881460..882275
+ /gene="cbiO"
+ /locus_tag="SARI_00868"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR005876"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:INSD:"
+ /note="with CbiNQ forms the ABC transporter for cobalt
+ import"
+ /codon_start=1
+ /transl_table=11
+ /product="cobalt transporter ATP-binding subunit"
+ /protein_id="YP_001569929.1"
+ /db_xref="GI:161502817"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR005876"
+ /translation="MLATSDLWFRYQDEPVLKGLNLDFSLSPVTGLVGANGCGKSTLF
+ MNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFS
+ LRNLGVPEAEITRRVDEALTLVDAQHFRHQPIQCLSHGQKKRVAIAGALVLQARYLLL
+ DEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQVLTHG
+ APGEVFACTEAMEQAGLTQPWLVKLHTQLGLPLCKTETEFFHRMQKCAFREAS"
+ misc_feature 881460..882272
+ /gene="cbiO"
+ /locus_tag="SARI_00868"
+ /note="cobalt transporter ATP-binding subunit;
+ Provisional; Region: cbiO; PRK13638"
+ /db_xref="CDD:184198"
+ misc_feature 881472..882098
+ /gene="cbiO"
+ /locus_tag="SARI_00868"
+ /note="First domain of the ATP-binding cassette component
+ of cobalt transport system; Region:
+ ABC_cobalt_CbiO_domain1; cd03225"
+ /db_xref="CDD:213192"
+ misc_feature 881559..881582
+ /gene="cbiO"
+ /locus_tag="SARI_00868"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213192"
+ misc_feature order(881568..881573,881577..881585,881709..881711,
+ 881940..881945,882039..882041)
+ /gene="cbiO"
+ /locus_tag="SARI_00868"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213192"
+ misc_feature 881700..881711
+ /gene="cbiO"
+ /locus_tag="SARI_00868"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213192"
+ misc_feature 881868..881897
+ /gene="cbiO"
+ /locus_tag="SARI_00868"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213192"
+ misc_feature 881928..881945
+ /gene="cbiO"
+ /locus_tag="SARI_00868"
+ /note="Walker B; other site"
+ /db_xref="CDD:213192"
+ misc_feature 881952..881963
+ /gene="cbiO"
+ /locus_tag="SARI_00868"
+ /note="D-loop; other site"
+ /db_xref="CDD:213192"
+ misc_feature 882027..882047
+ /gene="cbiO"
+ /locus_tag="SARI_00868"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213192"
+ gene 882272..883792
+ /locus_tag="SARI_00869"
+ CDS 882272..883792
+ /locus_tag="SARI_00869"
+ /inference="protein motif:HMMPfam:IPR002586"
+ /inference="protein motif:HMMPfam:IPR011698"
+ /inference="protein motif:HMMTigr:IPR004459"
+ /inference="similar to AA sequence:SwissProt:Q05597"
+ /note="'catalyzes amidations at positions B, D, E, and G
+ on adenosylcobyrinic A,C-diamide. NH(2) groups are
+ provided by glutamine, and one molecule of ATP is
+ hydrogenolyzed for each amidation'"
+ /codon_start=1
+ /transl_table=11
+ /product="cobyric acid synthase"
+ /protein_id="YP_001569930.1"
+ /db_xref="GI:161502818"
+ /db_xref="InterPro:IPR002586"
+ /db_xref="InterPro:IPR004459"
+ /db_xref="InterPro:IPR011698"
+ /translation="MTQAVMLQGTASDVGKSVLAAGLCRIFYQDGLRTAPFKSQNMAL
+ NSGITPDGKEMGRAQIFQAEAAGIMPDVRMNPVLLKPTSDRQAQIVLMGKVATNMDAV
+ SYHDYKPRLREQILAVYNSLAREYDVIVLEGAGSPAEINLRDRDIVNMGMAEMAQCPV
+ ILVADIDRGGVFAAIYGTLALLHKQERDRVKGVIINKFRGDVALLYSGIEQIESLTGV
+ PVLGVMPWLDVDLEDEDGVTLQNGKYKGNDDRDITIAIVQLPHISNFTDFNALAAQPD
+ VRIRYVRRPEELADVDLAILPGSKNTLSDLAWLRESGMADAVLQTHRQGVPVMGICGG
+ YQMLGDTIVDEVESGLGTQPGLGLLNTITRFAQDKTTTQVNATMSGELPGWLAAAAGL
+ PVRGYEIHMGETVLQEGCCTAMTLQKNGCPVADGAVTADGLAFGTYLHGLFDSDAFTR
+ AVVNGLRARKGLAPWETTFCYAEHKARQFDLLAEAMRQHIDIDKIYTIMQQHQEPV"
+ misc_feature 882272..883768
+ /locus_tag="SARI_00869"
+ /note="cobyric acid synthase; Provisional; Region:
+ PRK00784"
+ /db_xref="CDD:234838"
+ misc_feature 882272..882952
+ /locus_tag="SARI_00869"
+ /note="Dethiobiotin synthetase [Coenzyme metabolism];
+ Region: BioD; COG0132"
+ /db_xref="CDD:223210"
+ misc_feature 883031..883624
+ /locus_tag="SARI_00869"
+ /note="Type 1 glutamine amidotransferase (GATase1) domain
+ found in Cobyric Acid Synthase (CobQ); Region:
+ GATase1_CobQ; cd01750"
+ /db_xref="CDD:153221"
+ misc_feature order(883265..883267,883469..883471,883475..883477)
+ /locus_tag="SARI_00869"
+ /note="catalytic triad [active]"
+ /db_xref="CDD:153221"
+ gene 883789..884334
+ /gene="cobU"
+ /locus_tag="SARI_00870"
+ CDS 883789..884334
+ /gene="cobU"
+ /locus_tag="SARI_00870"
+ /inference="protein motif:BlastProDom:IPR003203"
+ /inference="protein motif:HMMPfam:IPR003203"
+ /inference="similar to AA sequence:SwissProt:Q05599"
+ /note="catalyzes ATP-dependent phosphorylation of
+ adenosylcobinamide to form adenosylcobinamide phosphate
+ and the addition of guanosine monophosphate to
+ adenosylcobinamide phosphate to form
+ adenosylcobinamide-GDP"
+ /codon_start=1
+ /transl_table=11
+ /product="adenosylcobinamide
+ kinase/adenosylcobinamide-phosphate guanylyltransferase"
+ /protein_id="YP_001569931.1"
+ /db_xref="GI:161502819"
+ /db_xref="InterPro:IPR003203"
+ /translation="MMILVTGGARSGKSRHAETLIGDAPQVLYIATSQILDDEMAARI
+ QHHKDGRPAHWRTVERWRHLDALITGDLAPEDAILLECVTTMVTNLLFTLGGESDPKH
+ WDYAAMERAIEDEMRILITACQRCPAKVILVTNEVGMGIVPENRLARHFRDIAGRVNQ
+ RLAAAADEVWLVVSGIGVKIK"
+ misc_feature 883792..884328
+ /gene="cobU"
+ /locus_tag="SARI_00870"
+ /note="Adenosylcobinamide kinase / adenosylcobinamide
+ phosphate guanyltransferase (CobU). CobU is bifunctional
+ cobalbumin biosynthesis enzymes which display
+ adenosylcobinamide kinase and adenosylcobinamide phosphate
+ guanyltransferase activity. This enzyme is a...; Region:
+ CobU; cd00544"
+ /db_xref="CDD:238304"
+ misc_feature order(883810..883818,883822..883824,884194..884205,
+ 884209..884211,884242..884244,884254..884259,
+ 884263..884268,884275..884277,884308..884310,
+ 884314..884316)
+ /gene="cobU"
+ /locus_tag="SARI_00870"
+ /note="homotrimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238304"
+ misc_feature 883810..883830
+ /gene="cobU"
+ /locus_tag="SARI_00870"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:238304"
+ misc_feature order(883816..883830,883885..883887,883930..883932,
+ 883939..883941,883963..883965,884029..884034)
+ /gene="cobU"
+ /locus_tag="SARI_00870"
+ /note="GTP binding site [chemical binding]; other site"
+ /db_xref="CDD:238304"
+ misc_feature 884017..884031
+ /gene="cobU"
+ /locus_tag="SARI_00870"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:238304"
+ gene 884331..885074
+ /gene="cobS"
+ /locus_tag="SARI_00871"
+ CDS 884331..885074
+ /gene="cobS"
+ /locus_tag="SARI_00871"
+ /inference="protein motif:HMMPfam:IPR003805"
+ /inference="protein motif:HMMTigr:IPR003805"
+ /inference="similar to AA sequence:SwissProt:Q05602"
+ /note="catalyzes the formation of adenosylcobalamin from
+ Ado-cobinamide-GDP and alpha-ribazole"
+ /codon_start=1
+ /transl_table=11
+ /product="cobalamin synthase"
+ /protein_id="YP_001569932.1"
+ /db_xref="GI:161502820"
+ /db_xref="InterPro:IPR003805"
+ /translation="MSKLFWATLSFISRLPVPSRWAQGLDFEQYSRGIVMFPLIGAIL
+ GGLSGLIFILLQPWCGIPLAALFCILALALLTGGFHLDGLADTCDGIFSARRRERMLE
+ IMRDSRLGTHGGLALIFVLLAKILVVSELALRGTPVLAALAAACAAGRGSAALLMYRH
+ RYAREEGLGNVFIGKVSGRQTCVTLGLAAIITTVLLPGMQGLAAIVITLAAIFILGQL
+ LKRTLGGQTGDTLGAAIELGELIFLLALL"
+ misc_feature 884331..885026
+ /gene="cobS"
+ /locus_tag="SARI_00871"
+ /note="cobalamin synthase; Reviewed; Region: cobS;
+ PRK00235"
+ /db_xref="CDD:234697"
+ gene 885100..886164
+ /gene="cobT"
+ /locus_tag="SARI_00872"
+ CDS 885100..886164
+ /gene="cobT"
+ /locus_tag="SARI_00872"
+ /inference="protein motif:BlastProDom:IPR008281"
+ /inference="protein motif:HMMPfam:IPR003200"
+ /inference="protein motif:HMMPIR:IPR012064"
+ /inference="protein motif:superfamily:IPR003200"
+ /inference="similar to AA sequence:REFSEQ:YP_217011.1"
+ /note="'catalyzes the synthesis of
+ alpha-ribazole-5'-phosphate from nicotinate mononucleotide
+ and 5,6-dimethylbenzimidazole'"
+ /codon_start=1
+ /transl_table=11
+ /product="nicotinate-nucleotide--dimethylbenzimidazole
+ phosphoribosyltransferase"
+ /protein_id="YP_001569933.1"
+ /db_xref="GI:161502821"
+ /db_xref="InterPro:IPR003200"
+ /db_xref="InterPro:IPR008281"
+ /db_xref="InterPro:IPR012064"
+ /translation="MQTLHALLRDIPAPDTDAMARAQQHIDGLLKPPGSLGRLEALAV
+ QLAGMPGLNGTPQVGEKAMLVMCADHGVWDEGVAVSPKIVTAIQAANMTRGTTGVCVL
+ AAQAGAKVHVIDVGIDAEPIPGVVNMRVARGCGNIAVGPAMSRSQAEVLLLEVIRYTC
+ DLAQRGVTLFGVGELGMANTTPAAAMVSVFTGSDAKEVVGIGANLPPSRIDNKVDVVR
+ RAIAINQPDPHDGIDVLSKVGGFDLVGMTGVMLGAARCGLPVLLDGFLSYSAALAACQ
+ IAPAVRSYLIPSHFSAEKGARIALAHLAMEPYLHMAMRLGEGSGAALAMPIVEAACAM
+ FHNMGELAASNIVLPGEKQT"
+ misc_feature 885118..886137
+ /gene="cobT"
+ /locus_tag="SARI_00872"
+ /note="Phosphoribosyltransferase; Region: DBI_PRT;
+ pfam02277"
+ /db_xref="CDD:190270"
+ misc_feature 885190..886125
+ /gene="cobT"
+ /locus_tag="SARI_00872"
+ /note="Nicotinate-nucleotide-dimethylbenzimidazole
+ phosphoribosyltransferase (DMB-PRT), also called CobT;
+ Region: DMB-PRT_CobT; cd02439"
+ /db_xref="CDD:143332"
+ misc_feature order(885190..885216,885334..885336,885349..885351,
+ 885358..885363,885385..885393,885400..885405,
+ 885409..885411,885973..885975,886015..886017,
+ 886021..886038,886042..886044,886066..886068,
+ 886075..886077,886087..886089,886096..886101,
+ 886111..886116)
+ /gene="cobT"
+ /locus_tag="SARI_00872"
+ /note="putative dimer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:143332"
+ misc_feature order(885193..885198,885331..885333,885349..885351,
+ 885361..885363,885619..885639,885889..885897,
+ 885970..885972,886042..886050,886117..886119)
+ /gene="cobT"
+ /locus_tag="SARI_00872"
+ /note="active site pocket [active]"
+ /db_xref="CDD:143332"
+ misc_feature 886048..886050
+ /gene="cobT"
+ /locus_tag="SARI_00872"
+ /note="putative cataytic base [active]"
+ /db_xref="CDD:143332"
+ gene 886247..887176
+ /locus_tag="SARI_00873"
+ CDS 886247..887176
+ /locus_tag="SARI_00873"
+ /inference="protein motif:HMMPfam:IPR005490"
+ /inference="similar to AA sequence:SwissProt:P40680"
+ /note="'KEGG: eci:UTI89_C2228 1.3e-129 erfK; hypothetical
+ protein K00257;
+ COG: COG1376 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569934.1"
+ /db_xref="GI:161502822"
+ /db_xref="InterPro:IPR005490"
+ /translation="MRRVTPFFLLFVLLVSHIALAISYPLPPEGSRLVGRPVTIAIPQ
+ NNTQPLEAFAARYGQGLSNMLEANPGVDVFLPESGSTLMVPQQLILPDTVREGIVVNV
+ AEMRLYYYPEGTNTVEVLPIGIGQAGRETPRNWVTAVERKQDGPVWVPTANTRREYAK
+ EGKTLPAMVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYL
+ FDNVPVGTRVQIIDRPVKFSLEPDGSRWLEVHEPLSRNRAEFESDNKVPLPLTPTLRT
+ FVTGEGTDITRANEALERRSGMPVNISAGLPGH"
+ misc_feature 886247..887161
+ /locus_tag="SARI_00873"
+ /note="L,D-transpeptidase; Provisional; Region: PRK10190"
+ /db_xref="CDD:182294"
+ misc_feature 886538..886936
+ /locus_tag="SARI_00873"
+ /note="L,D-transpeptidase catalytic domain; Region: YkuD;
+ pfam03734"
+ /db_xref="CDD:217702"
+ gene complement(887518..887718)
+ /locus_tag="SARI_00874"
+ CDS complement(887518..887718)
+ /locus_tag="SARI_00874"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569935.1"
+ /db_xref="GI:161502823"
+ /translation="MTFSIKKTINYNVNQFISISHSLNLTKDAKNSPYKGCFYNLSLD
+ YIQLNYHRIIYLPFARFIICIT"
+ gene 887865..890792
+ /locus_tag="SARI_00875"
+ CDS 887865..890792
+ /locus_tag="SARI_00875"
+ /inference="similar to AA sequence:REFSEQ:NP_065279.1"
+ /note="'COG: COG3209 Rhs family protein;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569936.1"
+ /db_xref="GI:161502824"
+ /translation="MSTSDYSKTPTITTYDNRHLAVRTLEWCRHPDTPQTTEIRPTYC
+ QYDARGFLSQSADPRLAAAGLNNFTCDYDLGGRVLRTCSADAGTSLALSDAAGRTVLG
+ MSGLVVTASGSTDMSRAVTTRRQYEDRSLPGRLLSVVEQASGKTGRVTERLIWSESSA
+ KASANNLVGTCIRHYDPSGCVEIGSIALSGLALSVTRWLMTDDEVQADWQGDDRRGWD
+ AQLDDVPYATLSQGDAAGRVVGITDAVGNKQRMVLDIAGMSTGRRLTVNGEEKDIVRS
+ TTRSAAGQVLQEEHGNGVVVNREYEPQTQWLKRIKTERPAGHPQGAGVLQDLRYEYDP
+ VGNVKCVRNDAEETRFWRNQQVEPENRYGYDSLYQLVSASGREKVNIGQQNRSFFPAD
+ SISCTRYLRTYTYDSGNNLTRIRHSASGSGNCHTTYITVSDSSNRAVLRSLAATPAEV
+ EMHFGPSGEQLQLQPGQALAWTVRRELLQVTPVEREGAQDDWEYYRYDARSQRVVKGS
+ RRQTGSGTLTQRVVYLPGLELRTKSSGESLQTVVSDNVRLLHWESGKPEGLSNDGLRY
+ SYENLTGSSGLEVDEDGCIISVEEYYPYGGTSVWSGSSETEADYKTVRYSGKEQDATG
+ LYYYGYRYYQTWAGRWTSADPAGTADGLNMYRMCRNNPVTFRDSNGLLTEKEIQILMF
+ QTRQHMSQTGKDLESVMHNILGLNGDDAAVIRSRLGNTFPEPRASTSGINEITAFEEQ
+ IEAMSMPGGSPLHIDLPSLMPENFQYPLYPDCCVELPPLTSSDTSDDDMYGVESPEMS
+ LPEITPELMTSHFPNMSEADRQALEYIANPENFSHTLYADGTVVSFSYKRFPGRFTNN
+ YKPDTWAFLCNFKSQEIDKGVYPYFASHVAQYQYLLAAVSGGWVGQMPSTLIRKNVIN
+ KDTIANTAGLKGEQLMSAFLNNTPNGKSTAKILEAFNLNATSVKIKNTYGDVNFYVNL
+ KRK"
+ misc_feature 887883..889883
+ /locus_tag="SARI_00875"
+ /note="Rhs family protein [Cell envelope biogenesis, outer
+ membrane]; Region: RhsA; COG3209"
+ /db_xref="CDD:225750"
+ misc_feature 889635..889877
+ /locus_tag="SARI_00875"
+ /note="RHS repeat-associated core domain; Region:
+ Rhs_assc_core; TIGR03696"
+ /db_xref="CDD:234316"
+ gene complement(891211..891549)
+ /locus_tag="SARI_00876"
+ CDS complement(891211..891549)
+ /locus_tag="SARI_00876"
+ /inference="protein motif:HMMPfam:IPR001207"
+ /inference="similar to AA sequence:INSD:ABP41461.1"
+ /note="'COG: COG3328 Transposase and inactivated
+ derivatives;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569937.1"
+ /db_xref="GI:161502825"
+ /db_xref="InterPro:IPR001207"
+ /translation="MALDAFAGEWDDKYPQISKSWRAHWENLNTFFGYPPDIRKAIDT
+ TNAIESLNSVSRHAIKKRKVFPTDDSVRKVVYLASKDASKKWSMPIQNWRLAMSRFII
+ EFGDRLSAHL"
+ misc_feature complement(891220..>891549)
+ /locus_tag="SARI_00876"
+ /note="Transposase and inactivated derivatives [DNA
+ replication, recombination, and repair]; Region: COG3328"
+ /db_xref="CDD:225865"
+ gene complement(891574..892281)
+ /locus_tag="SARI_00877"
+ CDS complement(891574..892281)
+ /locus_tag="SARI_00877"
+ /inference="similar to AA sequence:REFSEQ:YP_049780.1"
+ /note="'COG: COG0582 Integrase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569938.1"
+ /db_xref="GI:161502826"
+ /translation="MSPTDIKAKNANPLEKEYRLTDGFGMFLRVTPKGSKYWQMAYRF
+ EGKQKLFSIGVYPAVSLSDARQRRDEARRLLAQGIDPNAKKQAEVKELKAKRDKTRTF
+ AMVAKAWFATKTKWSKDYGDSVWKRLETYVFPATGDKDVAELDTGDLLVPVKRVEALG
+ YLEVAMRIQQYITAILRHAVQQKLIRHNPDYDMEGAVQKPQTHIQLCIIHMVRNSLKC
+ VSWKDYKAVTSGLKAVY"
+ misc_feature complement(<891682..892203)
+ /locus_tag="SARI_00877"
+ /note="DNA breaking-rejoining enzymes, C-terminal
+ catalytic domain. The DNA breaking-rejoining enzyme
+ superfamily includes type IB topoisomerases and tyrosine
+ recombinases that share the same fold in their catalytic
+ domain containing six conserved active site...; Region:
+ DNA_BRE_C; cl00213"
+ /db_xref="CDD:241691"
+ misc_feature complement(<891577..>891684)
+ /locus_tag="SARI_00877"
+ /note="Transposase and inactivated derivatives [DNA
+ replication, recombination, and repair]; Region: COG3328"
+ /db_xref="CDD:225865"
+ gene complement(892465..892537)
+ /locus_tag="SARI_00878"
+ tRNA complement(892465..892537)
+ /locus_tag="SARI_00878"
+ /product="tRNA-Asn"
+ gene 892729..894159
+ /locus_tag="SARI_00879"
+ CDS 892729..894159
+ /locus_tag="SARI_00879"
+ /inference="protein motif:HMMPfam:IPR002528"
+ /inference="protein motif:HMMTigr:IPR002528"
+ /inference="similar to AA sequence:REFSEQ:NP_804696.1"
+ /note="'COG: COG0534 Na+-driven multidrug efflux pump;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569939.1"
+ /db_xref="GI:161502827"
+ /db_xref="InterPro:IPR002528"
+ /translation="MNVSTTLRKVVVRTPWYAKRKSYKVLFWREITPLAIPIFLENTC
+ VLLMGVLSTFLVSWLGKEAMAGVGLADSFNMVIMAFFAAIDLGTTVVVAFSLGKRDRR
+ RARAAARQSLVIMTLFAVLLAAVIHYFGKQIIDVVAGEATADVKDLALIYLELTVLSY
+ PAAAIALIGSGALRGAGNTKIPLLINGSMNMLNIIISSILIYGFFSWQGLGFIGAGLG
+ LTISRYIGAIAIIWVLMIGFNPALRIPLKSYFKPLNFAIIWEVMGIGVPASVESVLFN
+ SGKLLTQIFVAGMGTSVIAGNFIAFSIAALINLPGNALGSASTIITGRRLGNGQITQA
+ EIQLRHVFWLSTIGLTAIAWISAPFAGIMASFYTHDPDVKDVVVILIWLNAAFMPIWA
+ ASWVLPAGFKGARDARFAMWVSMLGMWGCRVVAGYVLGIVLGWGVVGIWLGMFFDWAV
+ RAALFYWRMVSGRWLWKYPRPERKTR"
+ misc_feature 892729..894156
+ /locus_tag="SARI_00879"
+ /note="MATE family multidrug exporter; Provisional;
+ Region: PRK10189"
+ /db_xref="CDD:182293"
+ misc_feature 892813..894123
+ /locus_tag="SARI_00879"
+ /note="Subfamily of the multidrug and toxic compound
+ extrusion (MATE)-like proteins similar to Thermotoga
+ marina NorM; Region: MATE_NorM_like; cd13137"
+ /db_xref="CDD:240542"
+ gene 894282..894354
+ /locus_tag="SARI_00880"
+ tRNA 894282..894354
+ /locus_tag="SARI_00880"
+ /product="tRNA-Asn"
+ gene complement(894802..894948)
+ /locus_tag="SARI_00881"
+ CDS complement(894802..894948)
+ /locus_tag="SARI_00881"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569940.1"
+ /db_xref="GI:161502828"
+ /translation="MTCALFVKLIRMLHWLCLKLLRWYRLMLFWRGNLMQVYTQNNHK
+ AHKS"
+ gene complement(895034..896488)
+ /locus_tag="SARI_00882"
+ CDS complement(895034..896488)
+ /locus_tag="SARI_00882"
+ /inference="protein motif:HMMPfam:IPR000845"
+ /inference="protein motif:HMMTigr:IPR011271"
+ /inference="similar to AA sequence:REFSEQ:YP_150161.1"
+ /note="Catalyzes the hydrolysis of AMP to form adenine and
+ ribose 5-phosphate using water as the nucleophile"
+ /codon_start=1
+ /transl_table=11
+ /product="AMP nucleosidase"
+ /protein_id="YP_001569941.1"
+ /db_xref="GI:161502829"
+ /db_xref="InterPro:IPR000845"
+ /db_xref="InterPro:IPR011271"
+ /translation="MEHKGTNLTPEQALDRLEELYEQSVNALREAIASYIDNGTLPDP
+ HARLNGLFVYPSLSVSWDGATPNLPKTRAFGRFTHPGCYTTTVTRPALFRAYLLGQLN
+ LVYQDYGAHIAVEASHHEIPYPYVIDGSALTLDRSMSADLTRHFPTTELAQIGDETAD
+ GLFHPGEFYPLSHFDARRVDFSLARLRHYTGTPVEHFQPFVLFTNYTRYVDEFVRWGC
+ SQILDPNSPYIALSCAGGIWITAETEAPEEAISDLAWKKHQMPAWHLVTADGQGITLV
+ NIGVGPSNAKTICDHLAVLRPDVWLMIGHCGGLRESQAIGDYVLAHAYLRDDHVLDAV
+ LPPDIPIPSIAEVQRALYDATKAVSRMPGEEVKQRLRTGTVVTTDDRNWELRYSASAL
+ RFNLSRAVAIDMESSTIAAQGYRFRVPYGTLLCVSDKPLHGEIKLPGQANRFYEGAIS
+ EHLQIGIRAIDLLRAEGDRLHSRKLRTFNEPPFR"
+ misc_feature complement(895037..896488)
+ /locus_tag="SARI_00882"
+ /note="AMP nucleosidase; Provisional; Region: PRK08292"
+ /db_xref="CDD:236222"
+ misc_feature complement(895973..896458)
+ /locus_tag="SARI_00882"
+ /note="Bacterial AMP nucleoside phosphorylase N-terminus;
+ Region: AMNp_N; pfam10423"
+ /db_xref="CDD:220746"
+ misc_feature complement(895100..895879)
+ /locus_tag="SARI_00882"
+ /note="Nucleoside phosphorylase [Nucleotide transport and
+ metabolism]; Region: Pfs; COG0775"
+ /db_xref="CDD:223846"
+ unsure 895638..895881
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(896640..896963)
+ /locus_tag="SARI_00883"
+ CDS complement(896640..896963)
+ /locus_tag="SARI_00883"
+ /inference="similar to AA sequence:INSD:EAU38595.1"
+ /note="'COG: NOG24950 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569942.1"
+ /db_xref="GI:161502830"
+ /translation="MGHAKISNSLGTINTDLLDIEFLDIHASIMGKKPQEIYQRHERD
+ FMDPKYVDFSSRGIFHLQVGGGENTGVVSAVNNNSNWMRAKLAAYSDNPIKFEECSIK
+ IVLFL"
+ gene complement(897079..897861)
+ /locus_tag="SARI_00884"
+ CDS complement(897079..897861)
+ /locus_tag="SARI_00884"
+ /inference="similar to AA sequence:INSD:EAY45780.1"
+ /note="'COG: COG0582 Integrase;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569943.1"
+ /db_xref="GI:161502831"
+ /translation="MVRFGVRLVRFWSVPQRSLNDPKIRNLKPSFKPVKLSDSHGLYL
+ LANPGGSRIWYLKYRFNGKESRVSLGAYPLVSLAGARQQRDGVRKLLAQNINPAQQRM
+ ADKAAASPEKCFKAVALAWHKTNKKWSSDSATRILASMKNHIFPAIAHLPVTTLKTQH
+ FTALLRVIERKAFWKSRPEPGSSFATLCVTPFSRDLPKTTRRCIWKASPRRRLKITIP
+ PCLWSGYLNCLNVLAINRFDIGYSHSFVFSILNHPIFRCVGN"
+ misc_feature complement(<897349..897735)
+ /locus_tag="SARI_00884"
+ /note="DNA breaking-rejoining enzymes, C-terminal
+ catalytic domain. The DNA breaking-rejoining enzyme
+ superfamily includes type IB topoisomerases and tyrosine
+ recombinases that share the same fold in their catalytic
+ domain containing six conserved active site...; Region:
+ DNA_BRE_C; cl00213"
+ /db_xref="CDD:241691"
+ gene complement(897978..898050)
+ /locus_tag="SARI_00885"
+ tRNA complement(897978..898050)
+ /locus_tag="SARI_00885"
+ /product="tRNA-Asn"
+ gene complement(898159..898287)
+ /locus_tag="SARI_00886"
+ CDS complement(898159..898287)
+ /locus_tag="SARI_00886"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569944.1"
+ /db_xref="GI:161502832"
+ /translation="MQNICQLFTLHQTQVHSHRSKTTAFDLCNYRQSCTTQGQIMN"
+ gene complement(898924..900306)
+ /locus_tag="SARI_00887"
+ CDS complement(898924..900306)
+ /locus_tag="SARI_00887"
+ /inference="protein motif:HMMPfam:IPR005322"
+ /inference="similar to AA sequence:REFSEQ:YP_001142290.1"
+ /note="'KEGG: lsa:LSA0897 3.9e-66 pepD5; dipeptidase
+ D-type (U34 family) K01274;
+ COG: COG4690 Dipeptidase;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569945.1"
+ /db_xref="GI:161502833"
+ /db_xref="InterPro:IPR005322"
+ /translation="MIVARSADSDAMKAQHFVIHPAMHNQTGMYSTKAHNGANDFTWP
+ LPKESLRYTTVPNWKTQLHGATGFNEAGVGVSGTESIFASPKALAFDPYVEDKGITED
+ DIPDILLSQTKTAREAIALLGHIIETVGAGEGFGVAVVDDNEIWYLETATGHQWMAQR
+ LPADQYFATGNQGRLQNYDPNDANMMGSKSLVTFATEKGLYNPQKDGKFNFSKAYTRD
+ DERDRTYNDPRVWTIQQKFNPSVKQDMTAGRLFPVFMMPEKKMTLDDVKAVLRSHYEG
+ TKHDPYSNGLNGKEPWRPVSVFRTYEAHVMQVRPWLPKEIGEVSYIGLGMADLTAFVP
+ YYSGLKAYPANYTMGTDKADSQSIYWKYRKLQTLTMTDYPKLAPIVKKAYAEWEAKIA
+ KEQQEVEAEYLNMAKINKDAADKMLNDFNLRIMADAEKLTEALTNQLFTLRTQDIQSD
+ IFFANAAKKD"
+ misc_feature complement(899149..900303)
+ /locus_tag="SARI_00887"
+ /note="Peptidase family C69; Region: Peptidase_C69;
+ cl17793"
+ /db_xref="CDD:248347"
+ gene 900329..900472
+ /locus_tag="SARI_00888"
+ CDS 900329..900472
+ /locus_tag="SARI_00888"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569946.1"
+ /db_xref="GI:161502834"
+ /translation="MPTSSVVQEKPDEMNAKLIDNVSTHFLKENIFFPLKRHKYTGIT
+ PCH"
+ gene complement(901353..901541)
+ /locus_tag="SARI_00889"
+ CDS complement(901353..901541)
+ /locus_tag="SARI_00889"
+ /inference="protein motif:HMMPfam:IPR001584"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:REFSEQ:NP_943514.1"
+ /note="'COG: COG2801 Transposase and inactivated
+ derivatives;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569947.1"
+ /db_xref="GI:161502835"
+ /db_xref="InterPro:IPR001584"
+ /db_xref="InterPro:IPR012337"
+ /translation="MNRFDGSLRDDCLNIHWFLSLEDVQDKLEKWRRQYNHERTHSSL
+ NDMTPAEFMRSLKKDKDL"
+ misc_feature complement(901395..>901535)
+ /locus_tag="SARI_00889"
+ /note="Integrase core domain; Region: rve_3; pfam13683"
+ /db_xref="CDD:222316"
+ gene complement(901528..901830)
+ /locus_tag="SARI_00890"
+ CDS complement(901528..901830)
+ /locus_tag="SARI_00890"
+ /inference="protein motif:HMMPfam:IPR001584"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:REFSEQ:YP_153353.1"
+ /note="'COG: COG2801 Transposase and inactivated
+ derivatives;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569948.1"
+ /db_xref="GI:161502836"
+ /db_xref="InterPro:IPR001584"
+ /db_xref="InterPro:IPR012337"
+ /translation="MDFVSDSLFNGRRFRALAVVDNFSRECLAIHAGKSLKGEDVVRV
+ MEALRVLDKRLPVRIQTDNGSEFIPKTLDKWVYEHGVTMDFSRPGKPTDNPFIESF"
+ misc_feature complement(<901531..>901830)
+ /locus_tag="SARI_00890"
+ /note="Transposase and inactivated derivatives [DNA
+ replication, recombination, and repair]; Region: Tra5;
+ COG2801"
+ /db_xref="CDD:225361"
+ misc_feature complement(901531..901830)
+ /locus_tag="SARI_00890"
+ /note="Integrase core domain; Region: rve; pfam00665"
+ /db_xref="CDD:216050"
+ gene complement(902331..902453)
+ /locus_tag="SARI_00891"
+ CDS complement(902331..902453)
+ /locus_tag="SARI_00891"
+ /inference="protein motif:HMMPfam:IPR002514"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:REFSEQ:YP_153352.1"
+ /note="'COG: COG2801 Transposase and inactivated
+ derivatives;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569949.1"
+ /db_xref="GI:161502837"
+ /db_xref="InterPro:IPR002514"
+ /db_xref="InterPro:IPR009057"
+ /translation="MKKTRYTEEQIAFALKQAETGTRVGEVCRKMGISEATFYN"
+ misc_feature complement(<902334..902450)
+ /locus_tag="SARI_00891"
+ /note="Transposase; Region: HTH_Tnp_1; pfam01527"
+ /db_xref="CDD:201841"
+ gene 902946..903923
+ /locus_tag="SARI_00892"
+ CDS 902946..903923
+ /locus_tag="SARI_00892"
+ /inference="protein motif:BlastProDom:IPR011587"
+ /inference="protein motif:HMMPfam:IPR006059"
+ /inference="similar to AA sequence:REFSEQ:ZP_01595043.1"
+ /note="'COG: COG1840 ABC-type Fe3+ transport system,
+ periplasmic component;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569950.1"
+ /db_xref="GI:161502838"
+ /db_xref="InterPro:IPR006059"
+ /db_xref="InterPro:IPR011587"
+ /translation="MNIKKIITTILLIFISIPIFAKSVLVLYTSQPIEDAQVTVNTFE
+ KHHPDIEVKWIRDGTTKLMTRIQAELAAGGETPDVLLIADSLSMESLKHQGLLTAYKS
+ PQAKHFQSWLYDKNGYYYGTKMITTGIAYHSNAPVKPTSWLDLIKPELKNMTTLPSPL
+ YSGAAQIHQATLMNNSRLGWSYYEKLRKNGAMPQSGNGAVLSAIVSGDKAYGFLVDYM
+ AIRAKAKGAPIEFVFPKEGVSIVTEPVAIMKASKNPQGAKKFIDFLLSKEGQNMVLQQ
+ GYIPADAALPVPEGFPPRNSIKLMPFNRAKALTNTEVNKKCFAELFGSH"
+ misc_feature 903060..903911
+ /locus_tag="SARI_00892"
+ /note="ABC-type Fe3+ transport system, periplasmic
+ component [Inorganic ion transport and metabolism];
+ Region: AfuA; COG1840"
+ /db_xref="CDD:224753"
+ misc_feature 903072..903779
+ /locus_tag="SARI_00892"
+ /note="Bacterial extracellular solute-binding protein;
+ Region: SBP_bac_11; pfam13531"
+ /db_xref="CDD:222203"
+ gene 903937..905643
+ /locus_tag="SARI_00893"
+ CDS 903937..905643
+ /locus_tag="SARI_00893"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="similar to AA sequence:REFSEQ:ZP_01595044.1"
+ /note="'KEGG: cyb:CYB_0398 2.3e-08 modB; molybdate ABC
+ transporter, permease protein K02018;
+ COG: COG1178 ABC-type Fe3+ transport system, permease
+ component;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569951.1"
+ /db_xref="GI:161502839"
+ /db_xref="InterPro:IPR000515"
+ /translation="MFQYQSINHNRYKWWSWLLFCFITLLILLPILQLFIFAITDWQH
+ GRNSNLWHVLSNPLTWTALYNSLYTSGLGTLFSLLLGNLFAFCLVLTNIRIKQITFFL
+ VMLPMMIPPQITAMSWLQLFRQVGIFFNSIGLSQGFGWPNPLYSAEGIALLLGIQNTP
+ LVFLLIQTQLKYLPQEYIEAARLSGASFWKTFHDISLPLCRSTIWAGAAIAFVSSLGN
+ FGIPAMLGIPISLLVLPVYIYQILSSFGPAVLNEVAALSVLTGVLTIGIMILQKHMQR
+ HYAFPLIGITDNTLIFLLSNKWRIVIEILLSILIFSIVIAPLLALITTSLVPTTGVIL
+ NSDTFTLSAWKIIFDTQSATWRAILNSLLLSVSASLILMLLSLPLAWLLVRHPTRSLL
+ WLYNILDIPYALPGVVLAISFILLFAHPLPLLDISLNGTLTIIFFAYMARFFTVCIKP
+ VYSCMLQLDAAMEEAASLAGANVFQQFSHIVVPLLGPTAFSGAFLVFLSTIHELTVSA
+ LLWGPGKETLGVVIFNLYESGDIVQASAISVVVVIIVVLAMLLLNICSKFLPKGVMPW
+ QN"
+ misc_feature 904069..905625
+ /locus_tag="SARI_00893"
+ /note="ABC-type Fe3+ transport system, permease component
+ [Inorganic ion transport and metabolism]; Region: ThiP;
+ COG1178"
+ /db_xref="CDD:224099"
+ misc_feature 904189..904731
+ /locus_tag="SARI_00893"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature order(904201..904203,904231..904242,904246..904275,
+ 904282..904287,904291..904293,904402..904407,
+ 904411..904413,904417..904419,904426..904431,
+ 904435..904437,904447..904452,904459..904461,
+ 904510..904512,904552..904557,904564..904566,
+ 904585..904596,904603..904608,904648..904653,
+ 904681..904686,904693..904698,904702..904707,
+ 904714..904719,904726..904731)
+ /locus_tag="SARI_00893"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(904249..904293,904585..904602)
+ /locus_tag="SARI_00893"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(904291..904293,904387..904389,904603..904605,
+ 904642..904644,904651..904653,904681..904683)
+ /locus_tag="SARI_00893"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(904462..904500,904516..904521,904531..904533)
+ /locus_tag="SARI_00893"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ misc_feature 905113..905523
+ /locus_tag="SARI_00893"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature order(905116..905127,905131..905160,905167..905172,
+ 905176..905178,905251..905256,905260..905262,
+ 905266..905268,905281..905286,905290..905292,
+ 905302..905307,905314..905316,905365..905367,
+ 905407..905412,905419..905421,905440..905451,
+ 905458..905463,905500..905505)
+ /locus_tag="SARI_00893"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(905134..905178,905440..905457)
+ /locus_tag="SARI_00893"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(905176..905178,905236..905238,905458..905460,
+ 905494..905496,905503..905505)
+ /locus_tag="SARI_00893"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(905317..905355,905371..905376,905386..905388)
+ /locus_tag="SARI_00893"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene 905631..906656
+ /locus_tag="SARI_00894"
+ CDS 905631..906656
+ /locus_tag="SARI_00894"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMPfam:IPR013611"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="protein motif:superfamily:IPR008995"
+ /inference="similar to AA sequence:REFSEQ:YP_768772.1"
+ /note="'KEGG: rru:Rru_A3201 6.4e-66 ABC transporter
+ component K06020;
+ COG: COG3839 ABC-type sugar transport systems, ATPase
+ components;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569952.1"
+ /db_xref="GI:161502840"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR008995"
+ /db_xref="InterPro:IPR013611"
+ /translation="MAELRLEQLSKIFGNQTVVQKLDLTIPQGSFTAILGPSGCGKTT
+ TLRIIAGLEQPSTGCLFLGSRLLANKIISLPPEQRNMGMVFQSYALWPHMTVEENVGY
+ PLRLRQISSNIYKKRVMEALEAVELLAYSGRSPHELSGGQRQRVALARCLISNPEVIL
+ LDEPLSNLDRYLRTTMEKIFRELHHRTGTTFVYVTHDQAEAMALASHIAVMYKGTLVQ
+ WGIPQQIYEHPNNVWIAKFIGKGCILSLSIPGSEQFLDCTMLHQGFTQDRRVTYHNVL
+ IRPEHVHLKNKGLPAKVENCIYQGERYLLELRLVDGQLLTAFHHSSVQPQQLVCIQLM
+ QGWRLPK"
+ misc_feature 905631..906575
+ /locus_tag="SARI_00894"
+ /note="ABC-type spermidine/putrescine transport systems,
+ ATPase components [Amino acid transport and metabolism];
+ Region: PotA; COG3842"
+ /db_xref="CDD:226361"
+ misc_feature 905640..906347
+ /locus_tag="SARI_00894"
+ /note="ATP-binding cassette transporter nucleotide-binding
+ domain; Region: ABC_ATPase; cl17201"
+ /db_xref="CDD:247755"
+ misc_feature 905736..905759
+ /locus_tag="SARI_00894"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature order(905745..905750,905754..905762,905886..905888,
+ 906114..906119,906216..906218)
+ /locus_tag="SARI_00894"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213179"
+ misc_feature 905877..905888
+ /locus_tag="SARI_00894"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213179"
+ misc_feature 906042..906071
+ /locus_tag="SARI_00894"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213179"
+ misc_feature 906102..906119
+ /locus_tag="SARI_00894"
+ /note="Walker B; other site"
+ /db_xref="CDD:213179"
+ misc_feature 906126..906137
+ /locus_tag="SARI_00894"
+ /note="D-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature 906204..906224
+ /locus_tag="SARI_00894"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213179"
+ misc_feature 906453..>906614
+ /locus_tag="SARI_00894"
+ /note="TOBE domain; Region: TOBE_2; pfam08402"
+ /db_xref="CDD:219823"
+ gene complement(907009..909366)
+ /locus_tag="SARI_00895"
+ CDS complement(907009..909366)
+ /locus_tag="SARI_00895"
+ /inference="similar to AA sequence:INSD:AAF00615.1"
+ /note="'KEGG: hsa:23035 7.7e-08 PHLPPL; PH domain and
+ leucine rich repeat protein phosphatase-like K01090;
+ COG: COG4886 Leucine-rich repeat (LRR) protein;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="E3 ubiquitin-protein ligase SspH2"
+ /protein_id="YP_001569953.2"
+ /db_xref="GI:448236210"
+ /translation="MPFHVGSGCLPATISNSRIYRIAWSDTPPEMSSWEKGKEFFCST
+ HQTAALECIRTICHPPAGTTREDVVSRFDLLRTLAYAGWEENIHSGLHGENHFCILDE
+ DNQEILSVTLDDAGNYTVNCQGYSETYRLTMETEPGEECTEHAEGASGTSCLPATTAP
+ QTAAEYDAVWSAWQRAAPEGEARGRAAVVQEMRDCLNNGNPVLNVGAAGLTTLPDHLP
+ PHITTLIIPDNNLTHLSTLPAGLQELIFAGNQLPSLPALPSGLRELIVVESPLTSLPE
+ LPSGLCKLWAFNNQLASLPALPPGLRELSVDGNLLPSLPALPSGLQSLSASHNQMASL
+ PTLPPGLEELSVDDNQLASLPALPLRLQKLSVSHNLLTHLSALPPGLQSLWATNNRLT
+ SLSALPPGLEELVVFDNQLPSLPALPPGLRTLRASNNRLTRLPESITGLSSEATVHLE
+ GNLLSERTLQTMQNLTSAPGYSGPRIRFDMAGPSVPREARALHLAVADWLMPAREGEP
+ DPADRWHTSGQEDNAAAFSLFLDRLRETENFEKDPGFKAQISSWLALLAEDDVLRAKT
+ FAMATEATSSCQDRITLALHQMKNVQLVHNAEKGVYDNNLPGLVSTGREMFRMEMLER
+ IALEKVRTLAFVDEIEVCLAYQNKLKESLELTSVTAEMRFFGASGVTASDLRSADRQV
+ KAAENSEFSEWLLQWGPLHSVLERKEPERFNALREKQISDYEDTYQMLSDTELKPSGL
+ VGNTDAERTIGVRAMASAKKEFLNGLRPLVEEMLGSYLKARWRLN"
+ misc_feature complement(907012..909366)
+ /locus_tag="SARI_00895"
+ /note="E3 ubiquitin-protein ligase SspH2; Provisional;
+ Region: PRK15387"
+ /db_xref="CDD:185285"
+ misc_feature complement(<908938..909276)
+ /locus_tag="SARI_00895"
+ /note="pathogenicity island 2 effector protein SseI;
+ Provisional; Region: PRK15372"
+ /db_xref="CDD:185270"
+ misc_feature complement(<908845..908934)
+ /locus_tag="SARI_00895"
+ /note="Type III secretion system leucine rich repeat
+ protein; Region: TTSSLRR; pfam12468"
+ /db_xref="CDD:204932"
+ gene complement(910630..910773)
+ /locus_tag="SARI_00896"
+ CDS complement(910630..910773)
+ /locus_tag="SARI_00896"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569954.1"
+ /db_xref="GI:161502842"
+ /translation="MARKGNFVSLIYLIQMVTQHIIFQRNFAVTKKTDAEEGGAKIYH
+ NMQ"
+ gene 910776..911675
+ /locus_tag="SARI_00897"
+ CDS 910776..911675
+ /locus_tag="SARI_00897"
+ /inference="similar to AA sequence:INSD:AAX66485.1"
+ /note="'COG: COG4886 Leucine-rich repeat (LRR) protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569955.1"
+ /db_xref="GI:161502843"
+ /translation="MKMLPEGLKELSIELIRTVSDTVIDDILPEKLKKLSINFCDNIK
+ LPVKLPANLKSINLSSMTPVVWEIPTCNLPAHIDISTDGYVKLNPEFLTRSDITFSHK
+ SAGDALSFQPGDVVYGLCKARDRVSTLVNSLYSFSKKDIIIQNTLTDAVWDRKNRAVF
+ NKDEKIAERLNDVQRGIFFREYLSQHQKYNITEDKYSDLSNEECWIKTSKAGLEFQTR
+ LREQSVIFVVDNLVDAISDIANKKGKHGNAITAHELRWVYRNRHDDLVKQNVKFFLNG
+ KAISHEDIFSLVGWEQYKPKNGV"
+ misc_feature <910776..911672
+ /locus_tag="SARI_00897"
+ /note="type III secretion protein GogB; Provisional;
+ Region: PRK15386"
+ /db_xref="CDD:237954"
+ gene 912875..913576
+ /locus_tag="SARI_00898"
+ CDS 912875..913576
+ /locus_tag="SARI_00898"
+ /inference="protein motif:HMMPfam:IPR002502"
+ /inference="protein motif:HMMSmart:IPR002502"
+ /inference="protein motif:superfamily:IPR009070"
+ /inference="similar to AA sequence:REFSEQ:ZP_01496369.1"
+ /note="'KEGG: sgl:SG0100 6.7e-87 putative
+ N-acetylmuramoyl-L-alanine amidase K01446;
+ COG: COG3023 Negative regulator of beta-lactamase
+ expression;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569956.1"
+ /db_xref="GI:161502844"
+ /db_xref="InterPro:IPR002502"
+ /db_xref="InterPro:IPR009070"
+ /translation="MHYTSIDFKASIAALTGASVSAHYLVPDPSEKTYIAAGFKDMRI
+ FNLVDENERAWHAGVSSWAGRSNLNDTSIGIEMVNLASDNNGVFVFPPYNPVLIDAIK
+ ELAANILQRYPDITPVNVVGHSDIAPGRKSDPGAAFPWKELYDAGIGAWYEESTMQHY
+ LKQFSKSVPSKTEIVAKLKAYGYGISDAGTEIGYKNLIRTFQLHFRQKNYDGVADAET
+ AAILYALVDKYFPAK"
+ misc_feature 912875..913558
+ /locus_tag="SARI_00898"
+ /note="N-acetyl-anhydromuramyl-L-alanine amidase [Cell
+ envelope biogenesis, outer membrane]; Region: ampD;
+ COG3023"
+ /db_xref="CDD:225567"
+ misc_feature 912875..913285
+ /locus_tag="SARI_00898"
+ /note="Peptidoglycan recognition proteins (PGRPs) are
+ pattern recognition receptors that bind, and in certain
+ cases, hydrolyze peptidoglycans (PGNs) of bacterial cell
+ walls. PGRPs have been divided into three classes: short
+ PGRPs (PGRP-S), that are small (20...; Region: PGRP;
+ cd06583"
+ /db_xref="CDD:133475"
+ misc_feature order(912878..912880,912938..912940,913241..913243,
+ 913265..913267,913271..913273)
+ /locus_tag="SARI_00898"
+ /note="amidase catalytic site [active]"
+ /db_xref="CDD:133475"
+ misc_feature order(912878..912880,913241..913243,913271..913273)
+ /locus_tag="SARI_00898"
+ /note="Zn binding residues [ion binding]; other site"
+ /db_xref="CDD:133475"
+ misc_feature order(912881..912886,912926..912928,912938..912940,
+ 913016..913018,913037..913042,913079..913081,
+ 913241..913243,913253..913255,913265..913273)
+ /locus_tag="SARI_00898"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:133475"
+ misc_feature 913391..913540
+ /locus_tag="SARI_00898"
+ /note="Putative peptidoglycan binding domain; Region:
+ PG_binding_1; pfam01471"
+ /db_xref="CDD:216518"
+ gene complement(913864..914135)
+ /locus_tag="SARI_00899"
+ /note="Pseudogene compared to gi|16765208|ref|NP_460823.1|
+ phage-tail assembly-like protein [Salmonella typhimurium
+ LT2]"
+ gene complement(914540..914755)
+ /locus_tag="SARI_00900"
+ CDS complement(914540..914755)
+ /locus_tag="SARI_00900"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569957.1"
+ /db_xref="GI:161502845"
+ /translation="MMRSFGSPSFGSGHWRSLFIASFSIIAWVTLSIFEAFDKKWIAH
+ IISGGQRPPASVTVRRRCFHLLRLDVH"
+ gene 914941..915159
+ /locus_tag="SARI_00901"
+ CDS 914941..915159
+ /locus_tag="SARI_00901"
+ /inference="similar to AA sequence:INSD:AAL25906.1"
+ /note="'COG: COG0582 Integrase;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569958.1"
+ /db_xref="GI:161502846"
+ /translation="MAQGRKLKCTFHDLKAKDISDYEDSSREKQRFSGHKTESQVLVY
+ DRKVKISPTLDLPILAKTEDDDGAKYTK"
+ misc_feature <914965..915081
+ /locus_tag="SARI_00901"
+ /note="DNA breaking-rejoining enzymes, C-terminal
+ catalytic domain. The DNA breaking-rejoining enzyme
+ superfamily includes type IB topoisomerases and tyrosine
+ recombinases that share the same fold in their catalytic
+ domain containing six conserved active site...; Region:
+ DNA_BRE_C; cl00213"
+ /db_xref="CDD:241691"
+ misc_feature order(914968..914976,915070..915072)
+ /locus_tag="SARI_00901"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:238231"
+ misc_feature order(914974..914976,914983..914985,915043..915045,
+ 915070..915072)
+ /locus_tag="SARI_00901"
+ /note="active site"
+ /db_xref="CDD:238231"
+ misc_feature order(914974..914976,914983..914985,915043..915045,
+ 915070..915072)
+ /locus_tag="SARI_00901"
+ /note="Int/Topo IB signature motif; other site"
+ /db_xref="CDD:238231"
+ gene complement(915229..915315)
+ /locus_tag="SARI_00902"
+ tRNA complement(915229..915315)
+ /locus_tag="SARI_00902"
+ /product="tRNA-Ser"
+ gene 915404..916159
+ /locus_tag="SARI_00903"
+ CDS 915404..916159
+ /locus_tag="SARI_00903"
+ /inference="protein motif:HMMPfam:IPR010384"
+ /inference="similar to AA sequence:INSD:AAL20910.1"
+ /note="'COG: COG3228 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569959.1"
+ /db_xref="GI:161502847"
+ /db_xref="InterPro:IPR010384"
+ /translation="MIKWPWKAQEITQNADWLWDDALAIPLLVNLTAQEQARLIALAE
+ RFLQQKRLVALQGVELDSLKSARIALIFCLPILELGLEWLDGFHEVLIYPAPFVVDDE
+ WEDDIGLVHSQRVVQSGQSWQQGPIILNWLDIQDSFDASGFNLIIHEVAHKLDMRNGD
+ RASGIPFIPLRDVAGWEHDLHAAMNNIQDEIDLVGENAASIDAYAATDPAECFAVLSE
+ YFFSAPELFAPRFPALWQRFCQFYRQDPSQRLR"
+ misc_feature 915404..916156
+ /locus_tag="SARI_00903"
+ /note="DgsA anti-repressor MtfA; Provisional; Region:
+ PRK15410"
+ /db_xref="CDD:185308"
+ gene 916301..916373
+ /locus_tag="SARI_00904"
+ tRNA 916301..916373
+ /locus_tag="SARI_00904"
+ /product="tRNA-Asn"
+ gene 916502..917023
+ /locus_tag="SARI_00905"
+ CDS 916502..917023
+ /locus_tag="SARI_00905"
+ /inference="similar to AA sequence:INSD:CAG75789.1"
+ /note="'COG: COG0582 Integrase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569960.1"
+ /db_xref="GI:161502848"
+ /translation="MLVMVVRLRFYQQTGDAVMPLTDTKVKNAKPLDKEYKLTDGFGM
+ FLRVTPKGSKYWQMAYRFDGKQKIFSIGVYPTVSLADARQRRDEAKRLLAQGIDPNAK
+ KQAEVKELKAKRDNTRSFKSVTKAWFSTKKKWSEDYRHTVLNRLETYIFPDIGNRDIT
+ ELATGDLLVPIKK"
+ misc_feature 916634..>917020
+ /locus_tag="SARI_00905"
+ /note="DNA breaking-rejoining enzymes, C-terminal
+ catalytic domain. The DNA breaking-rejoining enzyme
+ superfamily includes type IB topoisomerases and tyrosine
+ recombinases that share the same fold in their catalytic
+ domain containing six conserved active site...; Region:
+ DNA_BRE_C; cl00213"
+ /db_xref="CDD:241691"
+ gene 917068..917343
+ /locus_tag="SARI_00906"
+ CDS 917068..917343
+ /locus_tag="SARI_00906"
+ /inference="protein motif:Gene3D:IPR013762"
+ /inference="protein motif:superfamily:IPR011010"
+ /inference="similar to AA sequence:INSD:CAG75789.1"
+ /note="'COG: COG0582 Integrase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569961.1"
+ /db_xref="GI:161502849"
+ /db_xref="InterPro:IPR011010"
+ /db_xref="InterPro:IPR013762"
+ /translation="MTSILRYAVQQQLIRYNPAYDLEGSIQKPETEHRPALELEEIPL
+ LLERIDAYKGRRLTTLAIQLNLLVFVRSSELRFARWSEIGNVPVNSP"
+ misc_feature <917068..>917316
+ /locus_tag="SARI_00906"
+ /note="DNA breaking-rejoining enzymes, C-terminal
+ catalytic domain. The DNA breaking-rejoining enzyme
+ superfamily includes type IB topoisomerases and tyrosine
+ recombinases that share the same fold in their catalytic
+ domain containing six conserved active site...; Region:
+ DNA_BRE_C; cl00213"
+ /db_xref="CDD:241691"
+ gene complement(917378..918949)
+ /locus_tag="SARI_00907"
+ CDS complement(917378..918949)
+ /locus_tag="SARI_00907"
+ /inference="protein motif:HMMPfam:IPR004291"
+ /inference="similar to AA sequence:REFSEQ:YP_407667.1"
+ /note="'COG: COG3436 Transposase and inactivated
+ derivatives;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569962.1"
+ /db_xref="GI:161502850"
+ /db_xref="InterPro:IPR004291"
+ /translation="MNICAGKRIISGMDITELLSTNDPDTLRQLALSLLEENRKKDAS
+ LSEKDHQIHLMREALMLARQQRFDRQAESFSGLQCSLFEEDADADIASAETQLARLLP
+ EPEEKKARPVRKILPEHLVREETVIGPDSCACPDCGQPLRHIRDEISERLDYIPAQFV
+ VKRYVRPQYGCEGCQRVVSGRLPAQIIPKGIPEPGLVAQVLVSKFCDRQPLYHQQQVF
+ ARAGVELPVSTLAGWVGTACVWLMPLAELLRTELLSRPVLHADETPLQILNTKKDGKA
+ QNGYLWAYVSGETTGDSVVCFDCQPGRAARYPEAWLAGWSGTLVTDGYAVYHSLKNGG
+ SIINAGCWAHARRGFAALYKANRDPHAGTALKMIHGLYSLEKKIRHRSPEKIRQWRQR
+ YAKPQLDALWAWLTSQAQKCAPDSALHKAIKYVLSHKMELSRFVDDGALPLDNNRCER
+ AIRQVVMGRNTWLFAGSLQAGHRAAAVMGLLETARLNGVEPYGWLKLVLERLPSLPEE
+ RLHELLPFAKNPLNN"
+ misc_feature complement(918578..918790)
+ /locus_tag="SARI_00907"
+ /note="Transposase C of IS166 homeodomain; Region:
+ LZ_Tnp_IS66; pfam13007"
+ /db_xref="CDD:221891"
+ misc_feature complement(918155..918634)
+ /locus_tag="SARI_00907"
+ /note="Transposase and inactivated derivatives [DNA
+ replication, recombination, and repair]; Region: COG3436"
+ /db_xref="CDD:225970"
+ misc_feature complement(918398..918565)
+ /locus_tag="SARI_00907"
+ /note="putative Helix-turn-helix domain of transposase
+ IS66; Region: HTH_Tnp_IS66; pfam13005"
+ /db_xref="CDD:221890"
+ misc_feature complement(917531..918385)
+ /locus_tag="SARI_00907"
+ /note="Transposase IS66 family; Region: DDE_Tnp_IS66;
+ pfam03050"
+ /db_xref="CDD:217337"
+ misc_feature complement(<917462..917512)
+ /locus_tag="SARI_00907"
+ /note="IS66 C-terminal element; Region: DDE_Tnp_IS66_C;
+ pfam13817"
+ /db_xref="CDD:205990"
+ gene complement(918977..919312)
+ /locus_tag="SARI_00909"
+ CDS complement(918977..919312)
+ /locus_tag="SARI_00909"
+ /inference="protein motif:HMMPfam:IPR008878"
+ /inference="similar to AA sequence:REFSEQ:NP_287106.1"
+ /note="'COG: COG3436 Transposase and inactivated
+ derivatives;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569963.1"
+ /db_xref="GI:161502852"
+ /db_xref="InterPro:IPR008878"
+ /translation="MLKPEQLFLVRHPVDMRCGIDVLTMYVQNSLSMPWHDGAAFLFT
+ NKNRTRIKLLRWDRHGVWLCARRLHRGRFIWPRDGDSTWSLTPEQFDWLVSGIDWQKM
+ SGHNLTKWT"
+ misc_feature complement(918998..919303)
+ /locus_tag="SARI_00909"
+ /note="IS66 Orf2 like protein; Region: TnpB_IS66;
+ pfam05717"
+ /db_xref="CDD:191353"
+ misc_feature complement(918980..>919291)
+ /locus_tag="SARI_00909"
+ /note="Transposase and inactivated derivatives [DNA
+ replication, recombination, and repair]; Region: COG3436"
+ /db_xref="CDD:225970"
+ gene complement(919299..919613)
+ /locus_tag="SARI_00911"
+ CDS complement(919299..919613)
+ /locus_tag="SARI_00911"
+ /inference="similar to AA sequence:INSD:AAN82104.1"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569964.1"
+ /db_xref="GI:161502854"
+ /translation="MTTHHTTTQKAQHVRDWRASGLTRLQYCRLHGLSSHAFHKWLRL
+ PDDGVSVTDNPVLLPVCILPSPEPAPPDSLITLHLPGGYRIDCLPAQLPDVLRAVKHA
+ EA"
+ misc_feature complement(919437..919589)
+ /locus_tag="SARI_00911"
+ /note="Transposase; Region: HTH_Tnp_1; cl17663"
+ /db_xref="CDD:248217"
+ gene 919311..919421
+ /locus_tag="SARI_00908"
+ CDS 919311..919421
+ /locus_tag="SARI_00908"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569965.1"
+ /db_xref="GI:161502851"
+ /translation="MFHRPENVRKLCGKAVDTVAAGEVQGDEAVGWRRFR"
+ gene 919506..919805
+ /locus_tag="SARI_00910"
+ CDS 919506..919805
+ /locus_tag="SARI_00910"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569966.1"
+ /db_xref="GI:161502853"
+ /translation="MRGKAVEATILKAGKAAGAPVPDMLSFLRGGVVSGHVIASGDRH
+ DHDATGLKKFENVSSPERYKQSINQPLSIVKIDQYKYIDLLYQLIDGDGVRRFTG"
+ gene 919954..920442
+ /locus_tag="SARI_00912"
+ CDS 919954..920442
+ /locus_tag="SARI_00912"
+ /inference="protein motif:HMMPfam:IPR008514"
+ /inference="similar to AA sequence:REFSEQ:ZP_01537154.1"
+ /note="'COG: COG3157 Hemolysin-coregulated protein
+ (uncharacterized);
+ Psort location: cytoskeletal, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569967.1"
+ /db_xref="GI:161502855"
+ /db_xref="InterPro:IPR008514"
+ /translation="MAIPVYLWLEDDGGAPIKGSVDVNGREGSIEVSELMHSVEQPTD
+ PLTGKATAKRLHSSYAFMKSVDNSSAYLYKALSSGQTLKKAVFKFYRINYNGQEEEYF
+ RTTLENVKVTEIEPFMMDIKNPQWERHDHLEYVDLAYEKITWHYLDGNIIHSDSWKGR
+ AA"
+ misc_feature 919957..920424
+ /locus_tag="SARI_00912"
+ /note="type VI secretion system effector, Hcp1 family;
+ Region: VI_effect_Hcp1; TIGR03344"
+ /db_xref="CDD:213799"
+ gene 920801..921379
+ /locus_tag="SARI_00913"
+ CDS 920801..921379
+ /locus_tag="SARI_00913"
+ /note="'Psort location: extracellular, including cell
+ wall, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569968.1"
+ /db_xref="GI:161502856"
+ /translation="MKYLLLALSVTSSVAMATQMEGFGANYYQDDSSIPNYDTSKSLV
+ PNVIIGDNVYTMEFSSLIDIAKTTGVTVNQGNQASWLCLASKGVNYWFISDNEMGQGD
+ LTSIAIAKADQQGNCSPYKGDLSITIKGTPLLDASFENISSIFLNKPNGNTVQYCTNT
+ KNYGDFTQMNCLQYFFKNKSIKGVIINQITSN"
+ gene complement(921434..921703)
+ /locus_tag="SARI_00915"
+ CDS complement(921434..921703)
+ /locus_tag="SARI_00915"
+ /inference="similar to AA sequence:REFSEQ:YP_049746.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569969.1"
+ /db_xref="GI:161502858"
+ /translation="MERIKIISIFKINEKVPFMTCIATDMEESEDGIKLMLESDESIC
+ IKDYGYYVLSEVDCDLDREQMINSYRRLFSELSRIGKVTVNSLMS"
+ gene 921570..921740
+ /locus_tag="SARI_00914"
+ CDS 921570..921740
+ /locus_tag="SARI_00914"
+ /note="'Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569970.1"
+ /db_xref="GI:161502857"
+ /translation="MQMLSSLSSMSFIPSSLSSISVAIHVIKGTFSFILKILIIFILS
+ IAYLSLLCLLYI"
+ gene complement(921893..922237)
+ /locus_tag="SARI_00917"
+ CDS complement(921893..922237)
+ /locus_tag="SARI_00917"
+ /note="'Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569971.1"
+ /db_xref="GI:161502860"
+ /translation="MAPSIFLLCFYLMLWTASDCFIQSRSAADFLVNIQLFFLYVIAA
+ TPQFFMDKSIINRDEPCLSNVIVLDNHEVLLWILFFCKLKNKCYISKKDLIFGKRILS
+ ILQLNNGNCVSH"
+ gene 921923..922054
+ /locus_tag="SARI_00916"
+ CDS 921923..922054
+ /locus_tag="SARI_00916"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569972.1"
+ /db_xref="GI:161502859"
+ /translation="MQYGKDPFTEDQILFRYIAFILKFTEKQYPQQYFVIVQNNHIA"
+ gene complement(922319..922516)
+ /locus_tag="SARI_00919"
+ CDS complement(922319..922516)
+ /locus_tag="SARI_00919"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569973.1"
+ /db_xref="GI:161502862"
+ /translation="MLIGYPFIVIMFILYNAGYTFVKNKCEKRKNNTLLRNSVHFFLG
+ ILTIKKFPQKKLKFPYRKLFP"
+ gene 922509..923210
+ /locus_tag="SARI_00918"
+ CDS 922509..923210
+ /locus_tag="SARI_00918"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="similar to AA sequence:INSD:AAS55464.1"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569974.1"
+ /db_xref="GI:161502861"
+ /db_xref="InterPro:IPR011991"
+ /translation="MSIDYNTIMTSSSEEVEEYINRNHFTDKQKLEIYSFYNRNRKDK
+ ITVNVKKERSSDIQPGIAYVHAFLDNLEKLGKNMSGAEYTIMIRLCKLMQHGNLIASI
+ SQSALAEELNMSKSNVCKCWNKLINKGILVKEGKHTMINANLFLKGQYRTLNATRKEY
+ VKKSLRTTSEGIEDVFVTVYKDTVLTNSAEKTIDKEDDKPLLSTPEEDIDWDSVSEDN
+ IFYDYPEDVDQEERI"
+ misc_feature 922734..922901
+ /locus_tag="SARI_00918"
+ /note="Helix-turn-helix domain; Region: HTH_36; pfam13730"
+ /db_xref="CDD:222348"
+ gene 923312..923779
+ /locus_tag="SARI_00920"
+ CDS 923312..923779
+ /locus_tag="SARI_00920"
+ /inference="similar to AA sequence:INSD:CAJ87575.1"
+ /note="'COG: NOG29407 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569975.1"
+ /db_xref="GI:161502863"
+ /translation="MRKVKLDNDDLIHYLNTIKALKKYPTMTEYKAEYRRLRTNGSPL
+ IEAKKFKSAHIELLRLDRKKTSLLEKFIEELNPVSHSSALASKSLEKVHESILYRKTL
+ LEKTPDELFALVIKQRTEAALELQRSIEQSLEQLSSISSDFNASTTKRRKFSI"
+ gene complement(923836..924072)
+ /locus_tag="SARI_00921"
+ CDS complement(923836..924072)
+ /locus_tag="SARI_00921"
+ /inference="similar to AA sequence:REFSEQ:YP_669831.1"
+ /note="'COG: NOG35479 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569976.1"
+ /db_xref="GI:161502864"
+ /translation="MIDEFHVMYMYKKIQAEAATTDIKTLEQLLKKFRQVVAERREEY
+ YQDIGEKKTQKLKTKRLQQFLERMERDRVSPFEL"
+ misc_feature complement(<923944..924027)
+ /locus_tag="SARI_00921"
+ /note="DNA-binding protein H-NS [General function
+ prediction only]; Region: Hns; COG2916"
+ /db_xref="CDD:225468"
+ gene complement(924213..924509)
+ /locus_tag="SARI_00922"
+ CDS complement(924213..924509)
+ /locus_tag="SARI_00922"
+ /inference="similar to AA sequence:REFSEQ:YP_669832.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569977.1"
+ /db_xref="GI:161502865"
+ /translation="MNTFKNKSTEIFYVVSLHIYAELFNSKDKTTSNMIMTHVMDHEF
+ ICKLIDLAMRNAEKHLLKKAWKKNAAEKLSEVDFKEVRQALAKMHYTVLAESIC"
+ gene complement(924639..924929)
+ /locus_tag="SARI_00923"
+ CDS complement(924639..924929)
+ /locus_tag="SARI_00923"
+ /inference="similar to AA sequence:REFSEQ:YP_051007.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569978.1"
+ /db_xref="GI:161502866"
+ /translation="MSKKSVIENKSTKLFIDLACRSFDANWKAFQEANGESSERLDDP
+ DFISLFLMYVIDHIKNNFVKFTTQEGDCGNINEVNFEQVAVVLVWHTERFRK"
+ gene complement(925002..925238)
+ /locus_tag="SARI_00924"
+ CDS complement(925002..925238)
+ /locus_tag="SARI_00924"
+ /inference="similar to AA sequence:REFSEQ:YP_049735.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569979.1"
+ /db_xref="GI:161502867"
+ /translation="MKNDISVVVSMLCERTPKTLSVIQESFNVFVALSGFPVEEIMMD
+ KNLLDALNRYVNNDLVDEMGLEYGSVLINLVYNK"
+ gene complement(925304..925630)
+ /locus_tag="SARI_00925"
+ CDS complement(925304..925630)
+ /locus_tag="SARI_00925"
+ /inference="similar to AA sequence:REFSEQ:NP_929100.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569980.1"
+ /db_xref="GI:161502868"
+ /translation="MINTMLPTMQINVSNDATRFFILKSVEDYDAYLQRMRKYMGERF
+ HHNLEDDSYMEGVLKSIIENGKKDFKDFLKRNKYKGSIKDVYFDEVLVHLRQIHQVMS
+ YLILHV"
+ misc_feature complement(925397..>925606)
+ /locus_tag="SARI_00925"
+ /note="glycyl-tRNA synthetase, tetrameric type, beta
+ subunit; Region: glyS; TIGR00211"
+ /db_xref="CDD:232875"
+ gene complement(925651..925869)
+ /locus_tag="SARI_00926"
+ CDS complement(925651..925869)
+ /locus_tag="SARI_00926"
+ /inference="protein motif:HMMPfam:IPR010260"
+ /inference="similar to AA sequence:REFSEQ:YP_051009.1"
+ /note="'COG: COG3311 Predicted transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569981.1"
+ /db_xref="GI:161502869"
+ /db_xref="InterPro:IPR010260"
+ /translation="MVQIKTDKHPKLIRLSEVIRRTGFGKTWIYTLIKTGRFPSQVKT
+ GVRAVAFIESEIDAWIDNAIARSRNVSK"
+ misc_feature complement(925663..925839)
+ /locus_tag="SARI_00926"
+ /note="Predicted transcriptional regulator
+ [Transcription]; Region: AlpA; COG3311"
+ /db_xref="CDD:225848"
+ gene complement(926045..926905)
+ /locus_tag="SARI_00927"
+ CDS complement(926045..926905)
+ /locus_tag="SARI_00927"
+ /inference="similar to AA sequence:REFSEQ:YP_049732.1"
+ /note="'COG: NOG07910 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569982.1"
+ /db_xref="GI:161502870"
+ /translation="MTKAEIASAVNEWFNIENYSVLQNLTVEQLFQEIENRIVVYRME
+ QNRAELSPENLSRHQKYYEELIEGKVVFGDVFGGPEKRLSSSYAIKPVTHQGLWEVAG
+ YVAAFDKYVNPEGKPLPHMEVSHYLKEAGVNNEGLMLVQINLAETSSEEIINHLKVMV
+ PEWKEQLQAPEPPVRDFRFGVSNLKKILDYNIIPIMDLLFWAQDEEVRIGMPQLTSFL
+ YPDEFKDGIRDVDKVKSTDHPLAVKYLTKLAHYQSFVDFTYKYDDRRHWNVQDLIREE
+ LGKDEQSGQD"
+ gene 927308..927562
+ /locus_tag="SARI_00928"
+ CDS 927308..927562
+ /locus_tag="SARI_00928"
+ /note="'COG: COG0582 Integrase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569983.1"
+ /db_xref="GI:161502871"
+ /translation="MHSFWEVNRGASRFIEKMEPPPMASTDTAIRKIKPTDKSFKLTN
+ SSGLYLLIKSNGLILWYIKYRILGKEKKQAFWSLTGCFPV"
+ misc_feature 927383..>927523
+ /locus_tag="SARI_00928"
+ /note="Domain of unknown function (DUF4102); Region:
+ DUF4102; pfam13356"
+ /db_xref="CDD:222069"
+ gene complement(927476..927718)
+ /locus_tag="SARI_00929"
+ CDS complement(927476..927718)
+ /locus_tag="SARI_00929"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569984.1"
+ /db_xref="GI:161502872"
+ /translation="MRRPAFVLTVPVYGDLAERMPVLLFLLRNFLSAEGAAPSRTLAR
+ AASRNWCALNRETSGQGPESLLFLFTKDAVLNVPEY"
+ gene 928056..928205
+ /locus_tag="SARI_00930"
+ CDS 928056..928205
+ /locus_tag="SARI_00930"
+ /inference="similar to AA sequence:INSD:AAL21654.1"
+ /note="'COG: COG2963 Transposase and inactivated
+ derivatives;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569985.1"
+ /db_xref="GI:161502873"
+ /translation="MTKPASTTKKIRKQHAPEFRQEALKLAERIGVAAVARELSLYES
+ QLYNW"
+ misc_feature 928080..>928202
+ /locus_tag="SARI_00930"
+ /note="Transposase; Region: HTH_Tnp_1; cl17663"
+ /db_xref="CDD:248217"
+ gene 928352..929218
+ /locus_tag="SARI_00931"
+ CDS 928352..929218
+ /locus_tag="SARI_00931"
+ /inference="protein motif:HMMPfam:IPR001584"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:INSD:AAL21655.1"
+ /note="'KEGG: nwi:Nwi_1018 1.2e-09 helix-turn-helix,
+ fis-type K00986;
+ COG: COG2801 Transposase and inactivated derivatives;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569986.1"
+ /db_xref="GI:161502874"
+ /db_xref="InterPro:IPR001584"
+ /db_xref="InterPro:IPR012337"
+ /translation="MKYVFIEKHQAEFSIKAMCRVLQVARSGWYIWHQRRYQINRRQQ
+ FRPVCDNVVREAFSDAKQRYGAPRLTDELRAQGRVYNIKTVAASLRRQGLRAKASRRF
+ SPVSYREHGLPVSENLLKQDFYASGPNQKWVGDITYLRTGEGWLYLAVVIDLWSRSVT
+ GWSMSSRMTAQLACDALQMALWRRKRPENVIVHTDRGGQYCSADYQSLLKRHNLRGSM
+ SARGCCYDNACAESFFHTLKVECIHGEDFASREIMRAVVFNYIECDYSRWRRHSACGG
+ LSPEQFENQNLA"
+ misc_feature 928415..929215
+ /locus_tag="SARI_00931"
+ /note="putative transposase OrfB; Reviewed; Region:
+ PHA02517"
+ /db_xref="CDD:222853"
+ misc_feature 928505..928657
+ /locus_tag="SARI_00931"
+ /note="HTH-like domain; Region: HTH_21; pfam13276"
+ /db_xref="CDD:222019"
+ misc_feature 928733..929074
+ /locus_tag="SARI_00931"
+ /note="Integrase core domain; Region: rve; pfam00665"
+ /db_xref="CDD:216050"
+ misc_feature 929042..929212
+ /locus_tag="SARI_00931"
+ /note="Integrase core domain; Region: rve_2; pfam13333"
+ /db_xref="CDD:205513"
+ gene complement(929499..930503)
+ /locus_tag="SARI_00932"
+ CDS complement(929499..930503)
+ /locus_tag="SARI_00932"
+ /inference="protein motif:HMMPfam:IPR001646"
+ /inference="similar to AA sequence:INSD:AAL20020.1"
+ /note="'KEGG: ana:alr3268 1.3e-07 serine/threonine kinase
+ K08884;
+ COG: COG1357 Uncharacterized low-complexity proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569987.1"
+ /db_xref="GI:161502875"
+ /db_xref="InterPro:IPR001646"
+ /translation="MPIIQPKPEDIARYLCAAGAGTKAAIKEATTPQGLCQWIMNFFT
+ FGGVRRSHEMHYQEVMKKLTSALLHINKNDFNSGAKIFLEDINGCTTCFSRGTPSDSG
+ IDAKVTIEVTKNGKTVTGQVYSKEFWNICRMLVLMQAHNIPLKVENALLTPDGFMNLC
+ GVDLSYKDLQGEDLSGMDASGANFTGAKLCGATLDSVFLCNATFCGANLSSATISFAN
+ MTDANLNDTDLTHARVKQATLTGATMIGANLTNAVLEYTPLHGANMSRATLTNTTLTG
+ INIKDARDTAPSASAAFVDDDENPFTIFRKQLEATNSRGVQDSPDIQYSPPTYQSGWV
+ "
+ misc_feature complement(929592..930503)
+ /locus_tag="SARI_00932"
+ /note="secreted effector protein PipB; Provisional;
+ Region: PRK15197"
+ /db_xref="CDD:185119"
+ misc_feature complement(929922..930032)
+ /locus_tag="SARI_00932"
+ /note="Pentapeptide repeats (8 copies); Region:
+ Pentapeptide; pfam00805"
+ /db_xref="CDD:109845"
+ misc_feature complement(929739..929855)
+ /locus_tag="SARI_00932"
+ /note="Pentapeptide repeats (8 copies); Region:
+ Pentapeptide; pfam00805"
+ /db_xref="CDD:109845"
+ gene complement(930763..930906)
+ /locus_tag="SARI_00933"
+ CDS complement(930763..930906)
+ /locus_tag="SARI_00933"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569988.1"
+ /db_xref="GI:161502876"
+ /translation="MSYVFYLYPLLLMQPGVNNLHIISIDSQLRLTTPTYPDNKYATL
+ LMP"
+ gene 931137..931349
+ /locus_tag="SARI_00934"
+ CDS 931137..931349
+ /locus_tag="SARI_00934"
+ /inference="protein motif:BlastProDom:IPR002059"
+ /inference="protein motif:FPrintScan:IPR002059"
+ /inference="protein motif:Gene3D:IPR012340"
+ /inference="protein motif:HMMPfam:IPR002059"
+ /inference="protein motif:HMMPIR:IPR012156"
+ /inference="protein motif:HMMSmart:IPR011129"
+ /inference="protein motif:ScanRegExp:IPR002059"
+ /inference="protein motif:superfamily:IPR008994"
+ /inference="similar to AA sequence:REFSEQ:YP_150168.1"
+ /note="'COG: COG1278 Cold shock proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569989.1"
+ /db_xref="GI:161502877"
+ /db_xref="InterPro:IPR002059"
+ /db_xref="InterPro:IPR008994"
+ /db_xref="InterPro:IPR011129"
+ /db_xref="InterPro:IPR012156"
+ /db_xref="InterPro:IPR012340"
+ /translation="MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFRT
+ LNENQEVEFSVEQGPKGPSAVDVVAL"
+ misc_feature 931149..931340
+ /locus_tag="SARI_00934"
+ /note="Cold-Shock Protein (CSP) contains an S1-like
+ cold-shock domain (CSD) that is found in eukaryotes,
+ prokaryotes, and archaea. CSP's include the major
+ cold-shock proteins CspA and CspB in bacteria and the
+ eukaryotic gene regulatory factor Y-box...; Region:
+ CSP_CDS; cd04458"
+ /db_xref="CDD:239905"
+ misc_feature order(931167..931169,931194..931196,931227..931229,
+ 931314..931316)
+ /locus_tag="SARI_00934"
+ /note="DNA-binding site [nucleotide binding]; DNA binding
+ site"
+ /db_xref="CDD:239905"
+ misc_feature order(931185..931205,931224..931235)
+ /locus_tag="SARI_00934"
+ /note="RNA-binding motif; other site"
+ /db_xref="CDD:239905"
+ gene 931816..932037
+ /locus_tag="SARI_00935"
+ CDS 931816..932037
+ /locus_tag="SARI_00935"
+ /inference="protein motif:superfamily:IPR009057"
+ /note="'COG: COG2963 Transposase and inactivated
+ derivatives;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569990.1"
+ /db_xref="GI:161502878"
+ /db_xref="InterPro:IPR009057"
+ /translation="MDIKLTKAQVFMSSPKFSLELRLAAVQHYLSGKIGFDEVAVHFG
+ VGRTALRRWGAAYELHGPDGLPDRLNLYP"
+ misc_feature 931861..>932019
+ /locus_tag="SARI_00935"
+ /note="Transposase and inactivated derivatives [DNA
+ replication, recombination, and repair]; Region: COG2963"
+ /db_xref="CDD:225511"
+ misc_feature 931879..932019
+ /locus_tag="SARI_00935"
+ /note="Helix-turn-helix domain; Region: HTH_28; pfam13518"
+ /db_xref="CDD:222191"
+ gene complement(931876..931995)
+ /locus_tag="SARI_00936"
+ CDS complement(931876..931995)
+ /locus_tag="SARI_00936"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569991.1"
+ /db_xref="GI:161502879"
+ /translation="MKLISGTPSAQGRPPDTKVYGDLIKTNFTGKIMLYGSKP"
+ gene complement(932020..932274)
+ /locus_tag="SARI_00937"
+ CDS complement(932020..932274)
+ /locus_tag="SARI_00937"
+ /inference="protein motif:FPrintScan:IPR001897"
+ /inference="protein motif:HMMPfam:IPR001702"
+ /inference="similar to AA sequence:REFSEQ:YP_150169.1"
+ /note="'COG: COG3203 Outer membrane protein (porin);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569992.1"
+ /db_xref="GI:161502880"
+ /db_xref="InterPro:IPR001702"
+ /db_xref="InterPro:IPR001897"
+ /translation="MNERNNYAGGETAEAWTVGAKYGAYNVYLAAMYSETRNMTYYGN
+ GDGEDSGGLANKTQNVEVVAQYQFDFGLRPSPVCVLRVKI"
+ misc_feature complement(<932050..>932274)
+ /locus_tag="SARI_00937"
+ /note="Porin superfamily. These outer membrane channels
+ share a beta-barrel structure that differ in strand and
+ shear number. Classical (gram-negative ) porins are
+ non-specific channels for small hydrophillic molecules and
+ form 16 beta-stranded barrels (16,20)...; Region:
+ OM_channels; cl17244"
+ /db_xref="CDD:247798"
+ misc_feature complement(<932050..>932262)
+ /locus_tag="SARI_00937"
+ /note="Outer membrane protein (porin) [Cell envelope
+ biogenesis, outer membrane]; Region: OmpC; COG3203"
+ /db_xref="CDD:225744"
+ gene complement(932343..932552)
+ /locus_tag="SARI_00939"
+ CDS complement(932343..932552)
+ /locus_tag="SARI_00939"
+ /inference="protein motif:HMMPfam:IPR001702"
+ /inference="similar to AA sequence:REFSEQ:YP_150169.1"
+ /note="'COG: COG3203 Outer membrane protein (porin);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569993.1"
+ /db_xref="GI:161502882"
+ /db_xref="InterPro:IPR001702"
+ /translation="MLGRTNGVATYRNTDFFSLVDCLNFALQYQGNNENGGAGKVRVT
+ AVVANWRVKMATVSGYLPRMTLTSG"
+ misc_feature complement(<932442..>932552)
+ /locus_tag="SARI_00939"
+ /note="Porin superfamily. These outer membrane channels
+ share a beta-barrel structure that differ in strand and
+ shear number. Classical (gram-negative ) porins are
+ non-specific channels for small hydrophillic molecules and
+ form 16 beta-stranded barrels (16,20)...; Region:
+ OM_channels; cl17244"
+ /db_xref="CDD:247798"
+ gene 932463..932801
+ /locus_tag="SARI_00938"
+ CDS 932463..932801
+ /locus_tag="SARI_00938"
+ /inference="similar to AA sequence:INSD:EAY49471.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569994.1"
+ /db_xref="GI:161502881"
+ /translation="MVLQREVQTVHQTEEVGVAVGSDAVGSAQHLDIGLGISVAAELR
+ QHIGRAFNVVDDAIVTTVIERAVIDEFQTGKAQTSTGVCAFTFSGVRLNVEFSLTIAG
+ QHIVDLRFAF"
+ gene complement(932751..932867)
+ /locus_tag="SARI_00940"
+ CDS complement(932751..932867)
+ /locus_tag="SARI_00940"
+ /inference="protein motif:HMMPfam:IPR001702"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569995.1"
+ /db_xref="GI:161502883"
+ /db_xref="InterPro:IPR001702"
+ /translation="MACVTFLTIQAAMATTPAFVLALKGKTQINDMLAGYGQ"
+ misc_feature complement(<932754..932807)
+ /locus_tag="SARI_00940"
+ /note="Porin superfamily. These outer membrane channels
+ share a beta-barrel structure that differ in strand and
+ shear number. Classical (gram-negative ) porins are
+ non-specific channels for small hydrophillic molecules and
+ form 16 beta-stranded barrels (16,20)...; Region:
+ OM_channels; cl17244"
+ /db_xref="CDD:247798"
+ gene 933015..933194
+ /locus_tag="SARI_00941"
+ CDS 933015..933194
+ /locus_tag="SARI_00941"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569996.1"
+ /db_xref="GI:161502884"
+ /translation="MSFLSKSYVFCFEYSYCEYNLFLYVLYVPIMKNNKKTGINAGNV
+ SNSKINDRRLITGSL"
+ gene 933500..933778
+ /locus_tag="SARI_00942"
+ CDS 933500..933778
+ /locus_tag="SARI_00942"
+ /inference="similar to AA sequence:REFSEQ:YP_216984.1"
+ /note="'COG: NOG20643 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569997.1"
+ /db_xref="GI:161502885"
+ /translation="MGGKLALWVFYTFCVYFIWVMARYVWLISVIQVEPVLGPNGAPV
+ SVTEKWLNALSLGVVWLILGSIAWYTRPRKGLTFPSDTKPEMRNQAGM"
+ gene 933903..934492
+ /locus_tag="SARI_00943"
+ /note="Pseudogene compared to gi|16765329|ref|NP_460944.1|
+ putative hydrolase [Salmonella typhimurium LT2]"
+ gene 934624..936054
+ /locus_tag="SARI_00944"
+ CDS 934624..936054
+ /locus_tag="SARI_00944"
+ /inference="protein motif:HMMPanther:IPR001525"
+ /inference="protein motif:HMMPfam:IPR001525"
+ /inference="protein motif:HMMTigr:IPR001525"
+ /inference="protein motif:ScanRegExp:IPR001525"
+ /inference="similar to AA sequence:INSD:AAL20902.1"
+ /note="'KEGG: stm:STM1992 8.7e-252 dcm; DNA cytosine
+ methylase K00558;
+ COG: COG0270 Site-specific DNA methylase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA cytosine methylase"
+ /protein_id="YP_001569998.1"
+ /db_xref="GI:161502886"
+ /db_xref="InterPro:IPR001525"
+ /db_xref="REBASE:M.StyAZDcmP"
+ /translation="MQENLSVTHARNFIADGAGSEVQAMLSQLLEIYDVKTLVAHLNG
+ LGEHHWSPAILKRVMMNTAWHRLSDNEFASLKTLLPTPPAHHPHYAFRFIDLFAGIGG
+ IRRGFEAIGGQCVFTSEWNKHAVRTYKANYFCDPLEHRFNEDIRDITLSHREGVGDDE
+ AAEHIRQYIPQHDVLLAGFPCQPFSLAGVSKKNALGRAHGFACETQGTLFFDVVRIID
+ ARRPALFVLENVKNLKSHDQGNTFRIIMQTLDELGYDVADAADNGPDDPKIIDGQHFL
+ PQHRERIVLVGVRRDLNLKTDFTLRNIARCYPPRRPTLAELLEPVVEAKYILTPVLWK
+ YLYCYAKKHQARGNGFGYGMVYPDNPESVARTLSARYYKDGAEILIDRGWDMAKGEVN
+ FDDAGNQQHRPRRLTPRECARLMGFETPQTYQFRIPVSDTQAYRQFGNSVVVPVFAAV
+ AKLLETKIHQAVALRQREAVDGGRSR"
+ misc_feature 934624..936030
+ /locus_tag="SARI_00944"
+ /note="DNA cytosine methylase; Provisional; Region:
+ PRK10458"
+ /db_xref="CDD:236696"
+ misc_feature 934894..935985
+ /locus_tag="SARI_00944"
+ /note="Cytosine-C5 specific DNA methylases; Methyl
+ transfer reactions play an important role in many aspects
+ of biology. Cytosine-specific DNA methylases are found
+ both in prokaryotes and eukaryotes. DNA methylation, or
+ the covalent addition of a methyl group...; Region:
+ Cyt_C5_DNA_methylase; cd00315"
+ /db_xref="CDD:238192"
+ misc_feature order(934912..934929,934975..934986,935053..935061,
+ 935155..935157,935161..935163)
+ /locus_tag="SARI_00944"
+ /note="cofactor binding site; other site"
+ /db_xref="CDD:238192"
+ misc_feature order(935155..935157,935164..935169,935176..935187,
+ 935194..935196,935239..935241,935305..935307,
+ 935311..935316,935461..935463,935467..935469,
+ 935632..935634,935638..935640,935716..935721,
+ 935725..935730,935941..935943)
+ /locus_tag="SARI_00944"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:238192"
+ misc_feature order(935155..935157,935164..935166,935176..935178,
+ 935305..935307,935311..935313,935461..935463,
+ 935467..935469,935941..935943)
+ /locus_tag="SARI_00944"
+ /note="substrate interaction site [chemical binding];
+ other site"
+ /db_xref="CDD:238192"
+ gene 936035..936505
+ /locus_tag="SARI_00945"
+ CDS 936035..936505
+ /locus_tag="SARI_00945"
+ /inference="protein motif:BlastProDom:IPR004603"
+ /inference="protein motif:HMMPfam:IPR004603"
+ /inference="protein motif:HMMPIR:IPR004603"
+ /inference="protein motif:HMMTigr:IPR004603"
+ /inference="similar to AA sequence:INSD:AAV76860.1"
+ /note="'KEGG: stm:STM1991 1.0e-81 vsr; DNA mismatch
+ endonuclease, patch repair protein K07458;
+ COG: COG3727 DNA G:T-mismatch repair endonuclease;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001569999.1"
+ /db_xref="GI:161502887"
+ /db_xref="InterPro:IPR004603"
+ /translation="MADVHDKATRSKNMRAIATRDTAIEKRLASLLTSQGITFHTQDA
+ TLPGKPDFVVNDYDCVIFTHGCFWHHHHCYLFNVPATRTAFWLEKIGKNVERDERDIQ
+ RLQALGWRVLIVWECALRGRAKLSDAALAERLEEWICGGGASAQIDTQGIHLLS"
+ misc_feature 936047..936391
+ /locus_tag="SARI_00945"
+ /note="Very Short Patch Repair (Vsr) Endonuclease.
+ Endonucleases in DNA repair that recognize damaged DNA and
+ cleave the phosphodiester backbone. Vsr endonucleases have
+ a common endonuclease topology that has been tailored for
+ recognition of TG mismatches; Region: Vsr; cd00221"
+ /db_xref="CDD:238136"
+ misc_feature order(936062..936073,936098..936103,936176..936178,
+ 936227..936229,936311..936313,936320..936322,
+ 936329..936331,936380..936382)
+ /locus_tag="SARI_00945"
+ /note="additional DNA contacts [nucleotide binding]; other
+ site"
+ /db_xref="CDD:238136"
+ misc_feature order(936074..936076,936083..936085,936311..936313)
+ /locus_tag="SARI_00945"
+ /note="mismatch recognition site; other site"
+ /db_xref="CDD:238136"
+ misc_feature order(936107..936109,936185..936187,936239..936241,
+ 936323..936325)
+ /locus_tag="SARI_00945"
+ /note="active site"
+ /db_xref="CDD:238136"
+ misc_feature order(936230..936232,936383..936385)
+ /locus_tag="SARI_00945"
+ /note="zinc binding site [ion binding]; other site"
+ /db_xref="CDD:238136"
+ misc_feature 936233..936238
+ /locus_tag="SARI_00945"
+ /note="DNA intercalation site [nucleotide binding]; other
+ site"
+ /db_xref="CDD:238136"
+ gene complement(936494..937414)
+ /locus_tag="SARI_00947"
+ CDS complement(936494..937414)
+ /locus_tag="SARI_00947"
+ /inference="protein motif:HMMPfam:IPR000620"
+ /inference="similar to AA sequence:INSD:CAD05737.1"
+ /note="'KEGG: syw:SYNW0942 0.0036 putative phosphatidate
+ cytidylyltransferase K00981;
+ COG: COG0697 Permeases of the drug/metabolite transporter
+ (DMT) superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570000.1"
+ /db_xref="GI:161502889"
+ /db_xref="InterPro:IPR000620"
+ /translation="MRFRQLLPLFGALFALYIIWGSTYFVIRIGVESWPPLMMAGIRF
+ LSAGIVLMAFLLLRGEKLPPLRQTINAVLIGLLLLAVGNGLVTVAEHQNVPSGIAAVV
+ VATVPLFTLCFSYFFGIKTRKLEWAGIAIGLAGIILLNSGGNLSGNPWGAILILIGSM
+ SWAFGSVYGSRIALPTGMMAGAIEMLAAGVILLCAAFLSGEKITTLPGLSGFMAVGYL
+ ALFGSIIAINAYMYLIRNVSPALATSYAYVNPVVAVLLGTGLGGEKLSPVEWAALGVI
+ VFAVVLVTLGKYLFPAGAVVTPCKTEGSRQ"
+ misc_feature complement(936539..937414)
+ /locus_tag="SARI_00947"
+ /note="putative DMT superfamily transporter inner membrane
+ protein; Provisional; Region: PRK11272"
+ /db_xref="CDD:183067"
+ misc_feature complement(<937064..937363)
+ /locus_tag="SARI_00947"
+ /note="EamA-like transporter family; Region: EamA;
+ pfam00892"
+ /db_xref="CDD:216178"
+ misc_feature complement(936560..936937)
+ /locus_tag="SARI_00947"
+ /note="EamA-like transporter family; Region: EamA;
+ pfam00892"
+ /db_xref="CDD:216178"
+ gene 937362..937502
+ /locus_tag="SARI_00946"
+ CDS 937362..937502
+ /locus_tag="SARI_00946"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570001.1"
+ /db_xref="GI:161502888"
+ /translation="MYKAKSAPKRGNNCRKRINSHSEITRVDTVNVKTITLASIIIVL
+ FE"
+ gene 937614..938501
+ /locus_tag="SARI_00948"
+ CDS 937614..938501
+ /locus_tag="SARI_00948"
+ /inference="protein motif:HMMPfam:IPR008526"
+ /inference="similar to AA sequence:REFSEQ:YP_150174.1"
+ /note="'COG: COG2354 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570002.1"
+ /db_xref="GI:161502890"
+ /db_xref="InterPro:IPR008526"
+ /translation="MLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVTGVRAN
+ RELPVVWSVAKGSLINKVILVPLALLISAFIPWAITPLLMLGGAFLCFEGVEKVLHTF
+ EARKHKEDPAERQKRLETLAAQDPLAFEKDKVKGAVRTDFILSAEIVAITLGIVAQAP
+ LLNQVLVLAGIALVVTIGVYGLVGIIVKLDDMGYWLAEKRSVLAQSVGKGLLIIAPWL
+ MKALSIVGTLAMFLVGGGIVVHGIAPLHHAIEHFAQQQGTFMAHTLPGLLNLVLGFII
+ GAIVVALVKSVAKIRGVSH"
+ misc_feature 937614..938498
+ /locus_tag="SARI_00948"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10062"
+ /db_xref="CDD:182217"
+ gene 938518..938763
+ /locus_tag="SARI_00949"
+ CDS 938518..938763
+ /locus_tag="SARI_00949"
+ /inference="similar to AA sequence:INSD:CAD05735.1"
+ /note="'COG: COG5475 Uncharacterized small protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570003.1"
+ /db_xref="GI:161502891"
+ /translation="MQNCLSSSKVKTFHLIQEAGMVFSVSEEVTVKEGGPRMIVTGYS
+ SGMVECRWYDGFGVKREAFHENELVPGKERRVRDEAR"
+ misc_feature 938572..938748
+ /locus_tag="SARI_00949"
+ /note="Uncharacterized small protein [Function unknown];
+ Region: COG5475"
+ /db_xref="CDD:227762"
+ gene 938928..940640
+ /locus_tag="SARI_00950"
+ CDS 938928..940640
+ /locus_tag="SARI_00950"
+ /inference="protein motif:HMMPfam:IPR000160"
+ /inference="protein motif:HMMSmart:IPR000160"
+ /inference="protein motif:HMMTigr:IPR000160"
+ /inference="similar to AA sequence:REFSEQ:YP_150176.1"
+ /note="'KEGG: vfi:VFA0796 1.3e-24 sensor protein;
+ COG: COG2199 FOG: GGDEF domain;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570004.1"
+ /db_xref="GI:161502892"
+ /db_xref="InterPro:IPR000160"
+ /translation="MPHETLLENQGWFKKLARRFGPGHVVNTCFLIVMLFSTLLTWRE
+ AIILKDAYVASQRNHLGSVANALDRQLQFNMDRLIFLRNGMHEALVVPLTFSALQSAV
+ MQFEQRRARRFWQLELDKRRTLPLYGVSDQFVARTTLLSRDNSDLANELTATLELGYL
+ ARLARSSAMLTLEAMYVSRSGFYLSTLPTAYGSDIVSRYYQYVTQPWFTEQSQRRNPQ
+ RGVRWFTSTRPYFSDERQKVTASLPLDHDNYWYGVLAMEIPVASLQRFLRDVAEKDIE
+ GEYQLYDNHLRLLADSTPEQQTANMLNDRERTLLAHEIEKDTEGGLRLGTRYVSWERL
+ DHFDGVLLRVHTFREGIQGNFGSISIALTLLWGLFTAMLLISWGVIRHMVRNMFVLQS
+ SLQWQAWHDPLTRLYNRGALFEKASRLAQRYREFRKPFSVIQLDLDYFKSVNDRFGHQ
+ AGDRVLSHAAGLIGSTIRSHDIAGRVGGEEFCIVLPDATKAQALQIAERIRQRINDKE
+ ILVTKSTTLRISASMGISSAEEYGDYDFEQLQSLADKRLYYAKQSGRNRICDSGATQE
+ WEKK"
+ misc_feature 938928..940637
+ /locus_tag="SARI_00950"
+ /note="putative diguanylate cyclase YedQ; Provisional;
+ Region: PRK15426"
+ /db_xref="CDD:237964"
+ misc_feature 940125..940604
+ /locus_tag="SARI_00950"
+ /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region:
+ GGDEF; cd01949"
+ /db_xref="CDD:143635"
+ misc_feature order(940233..940235,940362..940364)
+ /locus_tag="SARI_00950"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:143635"
+ misc_feature order(940248..940250,940257..940262,940272..940274,
+ 940284..940286,940350..940352,940356..940367)
+ /locus_tag="SARI_00950"
+ /note="active site"
+ /db_xref="CDD:143635"
+ misc_feature order(940338..940340,940422..940424)
+ /locus_tag="SARI_00950"
+ /note="I-site; other site"
+ /db_xref="CDD:143635"
+ gene complement(940619..941434)
+ /locus_tag="SARI_00951"
+ CDS complement(940619..941434)
+ /locus_tag="SARI_00951"
+ /inference="protein motif:HMMPfam:IPR013200"
+ /inference="protein motif:HMMTigr:IPR006379"
+ /inference="protein motif:HMMTigr:IPR006381"
+ /inference="protein motif:HMMTigr:IPR012815"
+ /inference="protein motif:ScanRegExp:IPR000150"
+ /inference="similar to AA sequence:INSD:AAV76865.1"
+ /note="catalyzes the hydrolysis of
+ mannosyl-3-phosphoglycerate to form the osmolyte
+ mannosylglycerate"
+ /codon_start=1
+ /transl_table=11
+ /product="mannosyl-3-phosphoglycerate phosphatase"
+ /protein_id="YP_001570005.1"
+ /db_xref="GI:161502893"
+ /db_xref="InterPro:IPR000150"
+ /db_xref="InterPro:IPR006379"
+ /db_xref="InterPro:IPR006381"
+ /db_xref="InterPro:IPR012815"
+ /db_xref="InterPro:IPR013200"
+ /translation="MLSIHDPLLIFTDLDGTLLNSHTFEWQPAAAWLTRLHESGVPVI
+ LCSSKTAAEMLQIQTMLNLQGLPLIAENGAVVQLDVHWENHPHYPRLIAGISHSEIRL
+ VLHKLREKEQFKFTTFDDVDDQVISEWTGLNRAQSALTRLHEASVSLIWRDSDERMAQ
+ FVARLNELGLQFVPGARFWHVLDASAGKDQAANWLIEAYRQQWHTRPLTFGLGDGPND
+ APLLDVMDYAVVVKGLNREGVHLRNNDPQRVYRSQNEGPDGWREGMDYFFSHS"
+ misc_feature complement(940622..941434)
+ /locus_tag="SARI_00951"
+ /note="mannosyl-3-phosphoglycerate phosphatase; Reviewed;
+ Region: PRK03669"
+ /db_xref="CDD:179628"
+ misc_feature complement(<941105..941410)
+ /locus_tag="SARI_00951"
+ /note="Haloacid dehalogenase-like hydrolases. The haloacid
+ dehalogenase-like (HAD) superfamily includes L-2-haloacid
+ dehalogenase, epoxide hydrolase, phosphoserine
+ phosphatase, phosphomannomutase, phosphoglycolate
+ phosphatase, P-type ATPase, and many others; Region:
+ HAD_like; cd01427"
+ /db_xref="CDD:119389"
+ misc_feature complement(order(941291..941296,941390..941398))
+ /locus_tag="SARI_00951"
+ /note="active site"
+ /db_xref="CDD:119389"
+ misc_feature complement(941381..941398)
+ /locus_tag="SARI_00951"
+ /note="motif I; other site"
+ /db_xref="CDD:119389"
+ misc_feature complement(941294..941296)
+ /locus_tag="SARI_00951"
+ /note="motif II; other site"
+ /db_xref="CDD:119389"
+ gene 941646..941729
+ /locus_tag="SARI_00952"
+ misc_RNA 941646..941729
+ /locus_tag="SARI_00952"
+ /product="DsrA RNA"
+ /inference="nucleotide motif:Rfam:RF00014"
+ /note="Rfam score 70.52"
+ gene complement(941743..941970)
+ /locus_tag="SARI_00953"
+ CDS complement(941743..941970)
+ /locus_tag="SARI_00953"
+ /inference="similar to AA sequence:INSD:AAL20895.1"
+ /note="'COG: NOG14111 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570006.1"
+ /db_xref="GI:161502894"
+ /translation="MKTAKEYSDTAKREVSVDVDALLAAINEISESEVQRSQEDPERV
+ SVDGREYHTWHELAEAFELDIHDFSVAEVNR"
+ misc_feature complement(941746..941919)
+ /locus_tag="SARI_00953"
+ /note="Protein of unknown function (DUF2525); Region:
+ DUF2525; pfam10733"
+ /db_xref="CDD:151216"
+ gene 942099..942293
+ /locus_tag="SARI_00954"
+ CDS 942099..942293
+ /locus_tag="SARI_00954"
+ /inference="similar to AA sequence:INSD:CAD05731.1"
+ /note="'COG: NOG14105 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570007.1"
+ /db_xref="GI:161502895"
+ /translation="MKVNDRVTVKTDGGPRRPGVVLAVEEFSEGIMYLVSLEDYPLGI
+ WFFNESGHQDGIFVEKAEQD"
+ misc_feature 942099..942284
+ /locus_tag="SARI_00954"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10708"
+ /db_xref="CDD:182664"
+ gene complement(942332..942955)
+ /locus_tag="SARI_00955"
+ CDS complement(942332..942955)
+ /locus_tag="SARI_00955"
+ /inference="protein motif:BlastProDom:IPR000792"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000792"
+ /inference="protein motif:HMMSmart:IPR000792"
+ /inference="protein motif:ScanRegExp:IPR000792"
+ /inference="similar to AA sequence:REFSEQ:YP_150180.1"
+ /note="'COG: COG2771 DNA-binding HTH domain-containing
+ proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570008.1"
+ /db_xref="GI:161502896"
+ /db_xref="InterPro:IPR000792"
+ /db_xref="InterPro:IPR011991"
+ /translation="MSTIIMDLCSYTRLGLSGYLVSRGVKKREINDIETVDELAVACS
+ AHQPSVVFINEDCFIHTPSDSQQIKQIINQYPDTLFIVFMAIANVHFDEYLLVRKNLL
+ ISSKSIKPDSLDTVLGDILKKESGMSGTINLPTLSLSRTESSMLRMWMEGQGTIQISD
+ RMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNVTNGIFVNMR"
+ misc_feature complement(942335..942955)
+ /locus_tag="SARI_00955"
+ /note="colanic acid capsular biosynthesis activation
+ protein A; Provisional; Region: rcsA; PRK15411"
+ /db_xref="CDD:185309"
+ misc_feature complement(942374..942544)
+ /locus_tag="SARI_00955"
+ /note="C-terminal DNA-binding domain of LuxR-like
+ proteins. This domain contains a helix-turn-helix motif
+ and binds DNA. Proteins belonging to this group are
+ response regulators; some act as transcriptional
+ activators, others as transcriptional repressors. Many...;
+ Region: LuxR_C_like; cd06170"
+ /db_xref="CDD:99777"
+ misc_feature complement(order(942401..942403,942434..942448,
+ 942452..942457,942461..942466,942488..942496,
+ 942533..942541))
+ /locus_tag="SARI_00955"
+ /note="DNA binding residues [nucleotide binding]"
+ /db_xref="CDD:99777"
+ misc_feature complement(order(942374..942379,942386..942388,
+ 942395..942403,942494..942496,942500..942502,
+ 942506..942508))
+ /locus_tag="SARI_00955"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99777"
+ gene complement(943238..944032)
+ /gene="fliR"
+ /locus_tag="SARI_00956"
+ CDS complement(943238..944032)
+ /gene="fliR"
+ /locus_tag="SARI_00956"
+ /inference="protein motif:HMMPfam:IPR002010"
+ /inference="protein motif:HMMTigr:IPR006303"
+ /inference="similar to AA sequence:INSD:AAL20893.1"
+ /note="'FliR, with proteins FliP and FliQ, forms the core
+ of the central channel in the flagella export apparatus'"
+ /codon_start=1
+ /transl_table=11
+ /product="flagellar biosynthesis protein FliR"
+ /protein_id="YP_001570009.1"
+ /db_xref="GI:161502897"
+ /db_xref="InterPro:IPR002010"
+ /db_xref="InterPro:IPR006303"
+ /translation="MIQVTSEQWLYWLNLYFWPLLRVLALISTAPILSERAIPKRVKL
+ GLGIMITLVIAPSLPANDTPLFSIAALWLAMQQILIGIALGFTMQFAFAAVRTAGEFI
+ GLQMGLSFATFVDPGSHLNMPVLARIMDMLAMLLFLTFNGHLWLISLLVDTFHTLPIG
+ SNPVNSNAFMALAKAGGLIFLNGLMLALPIITLLLTLNLALGLLNRMAPQLSIFVIGF
+ PLTLTVGIMLMAALMPLIAPFCEHLFSEIFNLLADIVSEMPVNNNP"
+ misc_feature complement(943283..944008)
+ /gene="fliR"
+ /locus_tag="SARI_00956"
+ /note="flagellar biosynthesis protein FliR; Reviewed;
+ Region: fliR; PRK05701"
+ /db_xref="CDD:235568"
+ gene complement(944041..944310)
+ /gene="fliQ"
+ /locus_tag="SARI_00957"
+ CDS complement(944041..944310)
+ /gene="fliQ"
+ /locus_tag="SARI_00957"
+ /inference="protein motif:HMMPfam:IPR002191"
+ /inference="protein motif:HMMTigr:IPR006305"
+ /inference="similar to AA sequence:INSD:CAD05728.1"
+ /note="with proteins FliP and FliR forms the core of the
+ central channel in the flagella export apparatus"
+ /codon_start=1
+ /transl_table=11
+ /product="flagellar biosynthesis protein FliQ"
+ /protein_id="YP_001570010.1"
+ /db_xref="GI:161502898"
+ /db_xref="InterPro:IPR002191"
+ /db_xref="InterPro:IPR006305"
+ /translation="MTPESVMMMGTEAMKVALALAAPLLLVALITGLIISILQAATQI
+ NEMTLSFIPKIVAVFIAIIVAGPWMLNLLLDYVRTLFSNLPYIIG"
+ misc_feature complement(944044..944310)
+ /gene="fliQ"
+ /locus_tag="SARI_00957"
+ /note="flagellar biosynthesis protein FliQ; Validated;
+ Region: fliQ; PRK05700"
+ /db_xref="CDD:235567"
+ gene complement(944320..945057)
+ /gene="fliP"
+ /locus_tag="SARI_00958"
+ CDS complement(944320..945057)
+ /gene="fliP"
+ /locus_tag="SARI_00958"
+ /inference="protein motif:BlastProDom:IPR005838"
+ /inference="protein motif:HMMPfam:IPR005838"
+ /inference="protein motif:HMMTigr:IPR005837"
+ /inference="protein motif:ScanRegExp:IPR005838"
+ /inference="similar to AA sequence:INSD:CAD05727.1"
+ /note="'FliP, with proteins FliQ and FliR, forms the core
+ of the central channel in the flagella export apparatus'"
+ /codon_start=1
+ /transl_table=11
+ /product="flagellar biosynthesis protein FliP"
+ /protein_id="YP_001570011.1"
+ /db_xref="GI:161502899"
+ /db_xref="InterPro:IPR005837"
+ /db_xref="InterPro:IPR005838"
+ /translation="MRRLLFLSLAGLWLFSPAAAAQLPGLISQPLAGGGQSWSLSVQT
+ LVFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMS
+ PVIDKIYVDAYQPFSEQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSGPLQ
+ GPEAVPMRILLPAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPATIA
+ LPFKLMLFVLVDGWQLLVGSLAQSFYS"
+ misc_feature complement(944326..945009)
+ /gene="fliP"
+ /locus_tag="SARI_00958"
+ /note="flagellar biosynthesis protein FliP; Reviewed;
+ Region: fliP; PRK05699"
+ /db_xref="CDD:235566"
+ gene complement(945057..945434)
+ /locus_tag="SARI_00959"
+ CDS complement(945057..945434)
+ /locus_tag="SARI_00959"
+ /inference="protein motif:HMMPfam:IPR007442"
+ /inference="similar to AA sequence:INSD:AAL20890.1"
+ /note="'with FlhA, FlhB, FliP, FliQ and FliR is one of the
+ membrane components of the flagellar export apparatus'"
+ /codon_start=1
+ /transl_table=11
+ /product="flagellar biosynthesis protein FliO"
+ /protein_id="YP_001570012.1"
+ /db_xref="GI:161502900"
+ /db_xref="InterPro:IPR007442"
+ /translation="MMKTQATVSQPAAPTGSPLIEVSGALIGIIALILAATWVIKRMG
+ FAPKRNSARGLKVSACASLGPRERVVIVEVENARLVLGVTASQINLLHTLPPAESDTE
+ TPVVPPADFQNMMKSLLKRSGRS"
+ misc_feature complement(945060..945431)
+ /locus_tag="SARI_00959"
+ /note="flagellar biosynthesis protein FliO; Provisional;
+ Region: PRK11486"
+ /db_xref="CDD:183160"
+ gene complement(945434..945847)
+ /gene="fliN"
+ /locus_tag="SARI_00960"
+ CDS complement(945434..945847)
+ /gene="fliN"
+ /locus_tag="SARI_00960"
+ /inference="protein motif:BlastProDom:IPR001543"
+ /inference="protein motif:HMMPfam:IPR001543"
+ /inference="protein motif:HMMTigr:IPR012826"
+ /inference="similar to AA sequence:REFSEQ:YP_150185.1"
+ /note="One of three proteins involved in switching the
+ direction of the flagellar rotation"
+ /codon_start=1
+ /transl_table=11
+ /product="flagellar motor switch protein FliN"
+ /protein_id="YP_001570013.1"
+ /db_xref="GI:161502901"
+ /db_xref="InterPro:IPR001543"
+ /db_xref="InterPro:IPR012826"
+ /translation="MSDMNNPSDENTGALDDLWADALNEQKATTNKSTADAVFQQLGG
+ GDVSGAMQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILIN
+ GYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR"
+ misc_feature complement(945437..945847)
+ /gene="fliN"
+ /locus_tag="SARI_00960"
+ /note="flagellar motor switch protein FliN; Validated;
+ Region: fliN; PRK07963"
+ /db_xref="CDD:181183"
+ misc_feature complement(945443..945847)
+ /gene="fliN"
+ /locus_tag="SARI_00960"
+ /note="flagellar motor switch protein; Validated; Region:
+ fliN; PRK05698"
+ /db_xref="CDD:168189"
+ gene complement(945844..946848)
+ /gene="fliM"
+ /locus_tag="SARI_00961"
+ CDS complement(945844..946848)
+ /gene="fliM"
+ /locus_tag="SARI_00961"
+ /inference="protein motif:BlastProDom:IPR001543"
+ /inference="protein motif:FPrintScan:IPR001689"
+ /inference="protein motif:HMMPfam:IPR001689"
+ /inference="protein motif:HMMTigr:IPR001689"
+ /inference="similar to AA sequence:INSD:AAA27104.1"
+ /note="with FliG and FliN makes up the switch complex
+ which is involved in switching the direction of the
+ flagella rotation"
+ /codon_start=1
+ /transl_table=11
+ /product="flagellar motor switch protein FliM"
+ /protein_id="YP_001570014.1"
+ /db_xref="GI:161502902"
+ /db_xref="InterPro:IPR001543"
+ /db_xref="InterPro:IPR001689"
+ /translation="MGDSILSQAEIDALLNGDSDTKDDPTPGIASDSDIRPYDPNTQR
+ RVVRERLQALEIINERFARQFRMGLFNLLRRSPDITVGAIRIQPYHEFARNLPVPTNL
+ NLIHLKPLRGTGLVVFSPSLVFIAVDNLFGGDGRFPTKVEGREFTHTEQRVINRMLKL
+ ALEGYSDAWKAINPLEVEYVRSEMQVKFTNITTSPNDIVVNTPFHVEIGNLTGEFNIC
+ LPFSMIEPLRELLVNPPLENSRHEDQNWRDNLVRQVQHSELELVANFADIPLRLSQIL
+ KLKPGDVLPIEKPDRIIAHVDGVPVLTSQYGTVNGQYALRVEHLINPILNSLNEEQPK
+ "
+ misc_feature complement(945847..946848)
+ /gene="fliM"
+ /locus_tag="SARI_00961"
+ /note="flagellar motor switch protein FliM; Validated;
+ Region: fliM; PRK06666"
+ /db_xref="CDD:235849"
+ misc_feature complement(945880..946101)
+ /gene="fliM"
+ /locus_tag="SARI_00961"
+ /note="Surface presentation of antigens (SPOA); Region:
+ SpoA; pfam01052"
+ /db_xref="CDD:201573"
+ gene complement(946853..947320)
+ /gene="fliL"
+ /locus_tag="SARI_00962"
+ CDS complement(946853..947320)
+ /gene="fliL"
+ /locus_tag="SARI_00962"
+ /inference="protein motif:HMMPfam:IPR005503"
+ /inference="similar to AA sequence:SwissProt:P26417"
+ /note="interacts with cytoplasmic MS ring of the basal
+ body and may act to stabilize the MotAB complexes which
+ surround the MS ring"
+ /codon_start=1
+ /transl_table=11
+ /product="flagellar basal body-associated protein FliL"
+ /protein_id="YP_001570015.1"
+ /db_xref="GI:161502903"
+ /db_xref="InterPro:IPR005503"
+ /translation="MTDSAINKKSKRSIWIPLLVLITLAACATAGYSYWRMQQQPTTN
+ AKAEPAPPPAPVFFAMDTFTVNLGDADRVLYIGVTLRLKDEATRARLNEYLPEVRSRL
+ LLLFSRQNAAELSTQAGKQKLIAAIKETLSAPLVAGQPGQVVTDVLYTAFILR"
+ misc_feature complement(946856..947320)
+ /gene="fliL"
+ /locus_tag="SARI_00962"
+ /note="flagellar basal body-associated protein FliL;
+ Reviewed; Region: fliL; PRK07021"
+ /db_xref="CDD:235909"
+ gene complement(947425..948627)
+ /locus_tag="SARI_00963"
+ CDS complement(947425..948627)
+ /locus_tag="SARI_00963"
+ /inference="protein motif:FPrintScan:IPR001635"
+ /inference="protein motif:HMMPfam:IPR001635"
+ /inference="similar to AA sequence:INSD:AAD15264.1"
+ /note="'KEGG: sce:YIR019C 0.0047 MUC1; Required for
+ invasion and pseudohyphae formation in response to
+ nitrogen starvation K01178;
+ COG: COG3144 Flagellar hook-length control protein;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="flagellar hook-length control protein"
+ /protein_id="YP_001570016.1"
+ /db_xref="GI:161502904"
+ /db_xref="InterPro:IPR001635"
+ /translation="MITLPQLITTDTDMTAGLTSGKTTDSAKDFLALLADALGADGAQ
+ SKDARITLADLQAAGSKLSKGLLTQHGEPGQSAKLADLLAQKANATDETLTDLTQAQH
+ LLSTLTPSLKTSALAALNKTAQHDEKTPTLSDEDLASLSALLAMLPGQPVATPAENHI
+ ALPSLLRGDMRSAPHEETHTLSFSEHEKGKMDAPLTRANDDRSTGQSLTPLVVATAAT
+ SAKVDVDSAPTPVTPGAAMPTLSSATAQPLPVASAPVLSAPLGSHEWQQTLSQQVTLF
+ TRQGQQSAQLRLHPEELGQVHISLKLDDNQAQLQMVSPHSHVRAALEAALPMLRTQLA
+ ESGIQLGQSSISSESFAGQQQSSSQQQPPARAPRADTFSAEDDLAIAAPASLQVAAYG
+ NGAVDIFA"
+ misc_feature complement(947428..948627)
+ /locus_tag="SARI_00963"
+ /note="Flagellar hook-length control protein [Cell
+ motility and secretion]; Region: FliK; COG3144"
+ /db_xref="CDD:225686"
+ misc_feature complement(947428..948627)
+ /locus_tag="SARI_00963"
+ /note="flagellar hook-length control protein; Provisional;
+ Region: PRK10118"
+ /db_xref="CDD:236652"
+ gene complement(948624..949067)
+ /gene="fliJ"
+ /locus_tag="SARI_00964"
+ CDS complement(948624..949067)
+ /gene="fliJ"
+ /locus_tag="SARI_00964"
+ /inference="protein motif:BlastProDom:IPR011567"
+ /inference="protein motif:FPrintScan:IPR000809"
+ /inference="protein motif:HMMPfam:IPR000809"
+ /inference="protein motif:HMMTigr:IPR012823"
+ /inference="similar to AA sequence:INSD:AAO68582.1"
+ /note="rod/hook and filament chaperone"
+ /codon_start=1
+ /transl_table=11
+ /product="flagellar biosynthesis chaperone"
+ /protein_id="YP_001570017.1"
+ /db_xref="GI:161502905"
+ /db_xref="InterPro:IPR000809"
+ /db_xref="InterPro:IPR011567"
+ /db_xref="InterPro:IPR012823"
+ /translation="MAQHGALETLKDLAEKEVDDAAHLLGEMRRGCQQAEEQLKMLID
+ YQNEYRSNLNTDMGKGIASNRWINYQQFIQTLEKAIEQHRLQLTLWTQKVDLALKSWR
+ EKKQRLQAWQTLQARQTAAALLAENRMDQKKMDEFAQRAAMRKPE"
+ misc_feature complement(948627..949067)
+ /gene="fliJ"
+ /locus_tag="SARI_00964"
+ /note="Flagellar biosynthesis chaperone [Cell motility and
+ secretion / Intracellular trafficking and secretion /
+ Posttranslational modification, protein turnover,
+ chaperones]; Region: FliJ; COG2882"
+ /db_xref="CDD:225437"
+ misc_feature complement(948627..949067)
+ /gene="fliJ"
+ /locus_tag="SARI_00964"
+ /note="flagellar biosynthesis chaperone; Validated;
+ Region: fliJ; PRK05689"
+ /db_xref="CDD:235563"
+ gene complement(949089..950459)
+ /gene="fliI"
+ /locus_tag="SARI_00965"
+ CDS complement(949089..950459)
+ /gene="fliI"
+ /locus_tag="SARI_00965"
+ /inference="protein motif:HMMPfam:IPR000194"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR005714"
+ /inference="protein motif:HMMTigr:IPR013379"
+ /inference="protein motif:ScanRegExp:IPR000194"
+ /inference="protein motif:superfamily:IPR004100"
+ /inference="similar to AA sequence:INSD:AAL20884.1"
+ /note="involved in type III protein export during
+ flagellum assembly"
+ /codon_start=1
+ /transl_table=11
+ /product="flagellum-specific ATP synthase"
+ /protein_id="YP_001570018.1"
+ /db_xref="GI:161502906"
+ /db_xref="InterPro:IPR000194"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR004100"
+ /db_xref="InterPro:IPR005714"
+ /db_xref="InterPro:IPR013379"
+ /translation="MTTRLTRWLTALDNFEAKIALLPAVRRYGRLTRATGLVLEATGL
+ QLPLGATCIIERQDGPETKEVESEVVGFNGQRLFLMPLEEVEGILPGARVYARNGHGD
+ GLQSGKQLPLGPALLGRVLDGGGKPLDGLPAPDTTETGALITPPFNPLQRTPIEHVLD
+ TGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKD
+ FIENILGPDGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTR
+ YAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGIHGGGSITAFYTVLTEGDD
+ QQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRAMTALITEQHYARVRLFK
+ QLLSSFQRNRDLVSVGAYAKGSDPMLDKAITLWPQLEAFLQQGIFERADWENSLQALD
+ LIFPTV"
+ misc_feature complement(949095..950459)
+ /gene="fliI"
+ /locus_tag="SARI_00965"
+ /note="flagellum-specific ATP synthase; Validated; Region:
+ fliI; PRK07960"
+ /db_xref="CDD:181182"
+ misc_feature complement(949158..950141)
+ /gene="fliI"
+ /locus_tag="SARI_00965"
+ /note="Flagellum-specific ATPase/type III secretory
+ pathway virulence-related protein. This group of ATPases
+ are responsible for the export of flagellum and
+ virulence-related proteins. The bacterial flagellar motor
+ is similar to the F0F1-ATPase, in that they...; Region:
+ ATPase_flagellum-secretory_path_III; cd01136"
+ /db_xref="CDD:238556"
+ misc_feature complement(949893..949913)
+ /gene="fliI"
+ /locus_tag="SARI_00965"
+ /note="Walker A motif/ATP binding site; other site"
+ /db_xref="CDD:238556"
+ misc_feature complement(949644..949658)
+ /gene="fliI"
+ /locus_tag="SARI_00965"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:238556"
+ gene complement(950459..951166)
+ /gene="fliH"
+ /locus_tag="SARI_00966"
+ CDS complement(950459..951166)
+ /gene="fliH"
+ /locus_tag="SARI_00966"
+ /inference="protein motif:HMMPfam:IPR000563"
+ /inference="similar to AA sequence:INSD:AAL20883.1"
+ /note="binds to and inhibits the function of flagella
+ specific ATPase FliI"
+ /codon_start=1
+ /transl_table=11
+ /product="flagellar assembly protein H"
+ /protein_id="YP_001570019.1"
+ /db_xref="GI:161502907"
+ /db_xref="InterPro:IPR000563"
+ /translation="MSNELPWQVWTPDDLAPPPEAFMPVEADNVILTEDAPEPELTAE
+ QQLEQEMAQLKIQAHEQGYNAGLAEGRQKGHAQGYQEGLAQGLEQGQAQAQTQQAPIH
+ AHMQQLVSEFQNTLDALDSVIASRLMQMALEAARQVIGQTPAVDNSALIKQIQQLLQQ
+ EPLFSGKPQLRVHPDDLQRVEEMLGATLSLHGWRLRGDPSLHHGGCKVSADEGDLDAS
+ VATRWQELCRLAAPGVL"
+ misc_feature complement(950462..951166)
+ /gene="fliH"
+ /locus_tag="SARI_00966"
+ /note="flagellar assembly protein H; Validated; Region:
+ fliH; PRK05687"
+ /db_xref="CDD:235562"
+ misc_feature complement(950489..950860)
+ /gene="fliH"
+ /locus_tag="SARI_00966"
+ /note="Flagellar assembly protein FliH; Region: FliH;
+ pfam02108"
+ /db_xref="CDD:111047"
+ gene complement(951159..952154)
+ /gene="fliG"
+ /locus_tag="SARI_00967"
+ CDS complement(951159..952154)
+ /gene="fliG"
+ /locus_tag="SARI_00967"
+ /inference="protein motif:HMMPfam:IPR000090"
+ /inference="protein motif:HMMTigr:IPR000090"
+ /inference="protein motif:superfamily:IPR011002"
+ /inference="similar to AA sequence:INSD:CAD05718.1"
+ /note="One of three proteins involved in switching the
+ direction of the flagellar rotation"
+ /codon_start=1
+ /transl_table=11
+ /product="flagellar motor switch protein G"
+ /protein_id="YP_001570020.1"
+ /db_xref="GI:161502908"
+ /db_xref="InterPro:IPR000090"
+ /db_xref="InterPro:IPR011002"
+ /translation="MSNLSGTDKSVILLMTIGEDRAAEVFKHLSTREVQALSTAMANV
+ RQISNKQLTDVLSEFEQEAEQFAALNINANEYLRSVLVKALGEERASSLLEDILETRD
+ TTSGIETLNFMEPQSAADLIRDEHPQIIATILVHLKRGQAADILALFDERLRHDVMLR
+ IATFGGVQPAALAELTEVLNGLLDGQNLKRSKMGGVRTAAEIINLMKTQQEEAVITAV
+ REFDGELAQKIIDEMFLFENLVDVDDRSIQRLLQEVDSESLLIALKGAEPPLREKFLR
+ NMSQRAADILRDDLANRGPVRLSQVENEQKAILLIVRRLAETGEMVIGSGEDTYV"
+ misc_feature complement(951162..952154)
+ /gene="fliG"
+ /locus_tag="SARI_00967"
+ /note="flagellar motor switch protein FliG; Region: fliG;
+ TIGR00207"
+ /db_xref="CDD:232874"
+ misc_feature complement(951183..951512)
+ /gene="fliG"
+ /locus_tag="SARI_00967"
+ /note="FliG C-terminal domain; Region: FliG_C; pfam01706"
+ /db_xref="CDD:190075"
+ gene complement(952147..953829)
+ /gene="fliF"
+ /locus_tag="SARI_00968"
+ CDS complement(952147..953829)
+ /gene="fliF"
+ /locus_tag="SARI_00968"
+ /inference="protein motif:FPrintScan:IPR000067"
+ /inference="protein motif:HMMPfam:IPR006182"
+ /inference="protein motif:HMMPfam:IPR013556"
+ /inference="protein motif:HMMTigr:IPR000067"
+ /inference="similar to AA sequence:SwissProt:P15928"
+ /note="'the MS-ring anchors the flagellum to the
+ cytoplasmic membrane; part of the flagellar basal body
+ which consists of four rings L, P, S, and M mounted on a
+ central rod'"
+ /codon_start=1
+ /transl_table=11
+ /product="flagellar MS-ring protein"
+ /protein_id="YP_001570021.1"
+ /db_xref="GI:161502909"
+ /db_xref="InterPro:IPR000067"
+ /db_xref="InterPro:IPR006182"
+ /db_xref="InterPro:IPR013556"
+ /translation="MSATASTATQPKPLEWLNRLRANPRIPLIVAGSAAVAIIVAMVL
+ WAKTPDYRTLFSNLSDQDGGAIVAQLTQMNIPYRFANGSGAIEVPADKVHELRLRLAQ
+ QGLPKGGAVGFELLDQEKFGISQFSEQVNYQRALEGELARTIETLGPVKSARVHLAMP
+ KPSLFVREQKSPSASVTVTLEPGRALDEGQISAVVHLVSSAVAGLPPGNVTLVDQSGH
+ LLTQSNTSGRDLNDAQLKFANDVESRIQRRIEAILSPIVGNGNVHAQVTAQLDFANKE
+ QTEEHYSPNGDASKATLRSRQLNISEQIGAGYPGGVPGALSNQPAPPNEAPIATPPGN
+ QQNAQNTAQTSTSTNSNSTGPRNTQRNETSNYEVDRTIRHTKMNVGDIERLSVAVVVN
+ YKTLADGKPLPLTADQMKQIEDLTREAMGFSDKRGDTLNVVNSPFSAVDETGGELPFW
+ QQQSFIDQLLAAGRWLLVLLVAWILWRKAVRPQLTRRVEETKAAQEQAQVRQETEEAV
+ EVRLSKDEQLQQRRANQRLGAEVMSQRIREMSDNDPRVVALVIRQWMSNDHE"
+ misc_feature complement(952156..953790)
+ /gene="fliF"
+ /locus_tag="SARI_00968"
+ /note="flagellar MS-ring protein; Reviewed; Region: fliF;
+ PRK06007"
+ /db_xref="CDD:235668"
+ misc_feature complement(953146..953706)
+ /gene="fliF"
+ /locus_tag="SARI_00968"
+ /note="Secretory protein of YscJ/FliF family; Region:
+ YscJ_FliF; pfam01514"
+ /db_xref="CDD:216544"
+ misc_feature complement(952519..953073)
+ /gene="fliF"
+ /locus_tag="SARI_00968"
+ /note="Flagellar M-ring protein C-terminal; Region:
+ YscJ_FliF_C; pfam08345"
+ /db_xref="CDD:219803"
+ gene 954046..954360
+ /gene="fliE"
+ /locus_tag="SARI_00969"
+ CDS 954046..954360
+ /gene="fliE"
+ /locus_tag="SARI_00969"
+ /inference="protein motif:HMMPfam:IPR001624"
+ /inference="protein motif:HMMTigr:IPR001624"
+ /inference="similar to AA sequence:REFSEQ:YP_150194.1"
+ /note="forms a junction between the M-ring and FlgB during
+ flagella biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="flagellar hook-basal body protein FliE"
+ /protein_id="YP_001570022.1"
+ /db_xref="GI:161502910"
+ /db_xref="InterPro:IPR001624"
+ /translation="MAAIQGIEGVISQLQATAVGARGQETQSQPTMSFAGQLHAALDR
+ ISDRQTEARVQAEKFTLGEPGIALNDVMADMQKASVSMQMGIQVRNKLVAAYQEVMSM
+ QV"
+ misc_feature 954046..954357
+ /gene="fliE"
+ /locus_tag="SARI_00969"
+ /note="flagellar hook-basal body protein FliE; Reviewed;
+ Region: fliE; PRK00253"
+ /db_xref="CDD:178948"
+ gene complement(954517..954870)
+ /locus_tag="SARI_00970"
+ CDS complement(954517..954870)
+ /locus_tag="SARI_00970"
+ /inference="similar to AA sequence:REFSEQ:YP_150195.1"
+ /note="'COG: NOG29680 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570023.1"
+ /db_xref="GI:161502911"
+ /translation="MIKIIFISIIGTVCPAAACYSPVTVINAYPSVIARCLADNLSPY
+ GYILDLHETDIPGINKEFTVYYRNGAHIAGTFWIANSMTTASERTVGMYGVSKQACPI
+ FNKSLQHCATRLSVK"
+ gene complement(955171..955404)
+ /locus_tag="SARI_00971"
+ CDS complement(955171..955404)
+ /locus_tag="SARI_00971"
+ /inference="protein motif:HMMPfam:IPR001455"
+ /inference="protein motif:ScanRegExp:IPR001455"
+ /inference="similar to AA sequence:INSD:BAB36092.1"
+ /note="'COG: COG0425 Predicted redox protein, regulator of
+ disulfide bond formation;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570024.1"
+ /db_xref="GI:161502912"
+ /db_xref="InterPro:IPR001455"
+ /translation="MKNIVPDYRLDMVGEPCPYPAVATLEAMPQLKKGEILEVVSDCP
+ QSINNIPLDARNHGYTVLDIQQDGPTIRYLIQK"
+ misc_feature complement(955174..955380)
+ /locus_tag="SARI_00971"
+ /note="YedF is a bacterial SirA-like protein of unknown
+ function. SirA (also known as UvrY, and YhhP) belongs
+ to a family of a two-component response regulators that
+ controls secondary metabolism and virulence. The other
+ member of this two-component system...; Region: YedF;
+ cd03422"
+ /db_xref="CDD:239514"
+ misc_feature complement(order(955339..955341,955345..955356,
+ 955363..955365,955372..955377))
+ /locus_tag="SARI_00971"
+ /note="CPxP motif; other site"
+ /db_xref="CDD:239514"
+ gene complement(955401..956606)
+ /locus_tag="SARI_00972"
+ CDS complement(955401..956606)
+ /locus_tag="SARI_00972"
+ /inference="protein motif:HMMPfam:IPR007272"
+ /inference="similar to AA sequence:REFSEQ:YP_150197.1"
+ /note="'COG: COG2391 Predicted transporter component;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative inner membrane protein"
+ /protein_id="YP_001570025.1"
+ /db_xref="GI:161502913"
+ /db_xref="InterPro:IPR007272"
+ /translation="MSWQHFRKTWLIKFWAPAPAVIAAGILSTYYFGITGTFWAVTGE
+ FTRWGGQILQLFGVHAEQWGYYKLIHLEGTPLTRIDGMMILGMFGGCFAAALWANNVK
+ LRMPRSRIRIVQAVVGGIIAGFGARLAMGCNLAAFFTGIPQFSLHAWFFALATAIGSW
+ FGARFTLLPIFRIPVKMQKVSAASPLTQKPAQARRRFRLGMLVFIGMIGWALLTAMHQ
+ PKLGLAMVFGVGFGLLIERAQICFTSAFRDLWISGRAHMAKAIIFGMAVSAIGIFSYV
+ QLGVAPKIMWAGPNAVIGGLLFGFGIVLAGGCETGWMYRAVEGQVHYWWVGLGNVIGS
+ TILAYYWDDFAPALATNWEKVNLLSTFGPLGGLLVTYLLLFAALMLIIGWEKRFFRRA
+ GLTLAKESA"
+ misc_feature complement(955422..956591)
+ /locus_tag="SARI_00972"
+ /note="putative inner membrane protein; Provisional;
+ Region: PRK11099"
+ /db_xref="CDD:236845"
+ gene 956789..957205
+ /locus_tag="SARI_00973"
+ CDS 956789..957205
+ /locus_tag="SARI_00973"
+ /inference="similar to AA sequence:INSD:AAL20876.1"
+ /note="'COG: NOG09020 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570026.1"
+ /db_xref="GI:161502914"
+ /translation="MMEKVAIAGVLLVLAGCAEVENYNDVEKTPAPVGLEGYWQSKGP
+ QRKLVSPEAIASLVVTKEGDTLDCRQWQRVIALPGKLTMFSDDLTNVTVKRELYEIER
+ DGNTLEYDGMTLQRVDRPTPECAAALEKTPLPTPLP"
+ misc_feature 956792..957202
+ /locus_tag="SARI_00973"
+ /note="lipoprotein; Provisional; Region: PRK10397"
+ /db_xref="CDD:182428"
+ gene complement(957409..957777)
+ /locus_tag="SARI_00974"
+ CDS complement(957409..957777)
+ /locus_tag="SARI_00974"
+ /inference="protein motif:HMMPfam:IPR006047"
+ /inference="similar to AA sequence:SwissProt:P26613"
+ /note="'KEGG: spt:SPA0907 5.3e-62 amyA; cytoplasmic
+ alpha-amylase K01176;
+ COG: COG0366 Glycosidases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570027.1"
+ /db_xref="GI:161502915"
+ /db_xref="InterPro:IPR006047"
+ /translation="MLLDVVVNHKMGADEKERIRVQRVSQDDRTQINDNIIECEGWTR
+ YTFPARAGQYSNFIWDYHCFSGIDHIENPDEDGIVKIFNDYTGDGWNDQVDNEMGNFD
+ YLMGENSDFRNHAVTEEIQD"
+ misc_feature complement(<957418..>957768)
+ /locus_tag="SARI_00974"
+ /note="Alpha amylase catalytic domain family; Region:
+ AmyAc_family; cl07893"
+ /db_xref="CDD:244824"
+ gene complement(957931..958299)
+ /locus_tag="SARI_00975"
+ CDS complement(957931..958299)
+ /locus_tag="SARI_00975"
+ /inference="protein motif:HMMPfam:IPR008622"
+ /inference="similar to AA sequence:INSD:AAO68593.1"
+ /note="binds flagellar cap subunits (FliD) and seems to
+ prevents their oligomerization prior to its translocation
+ through the flagellum-specific type III export pathway;
+ acts as a repressor of flagellar class 2 operons by
+ preventing FlhD2C2 to bind the promoter and inhibiting the
+ FlhD2C2-dependent transcription; member of the type III
+ cytoplasmic chaperone family"
+ /codon_start=1
+ /transl_table=11
+ /product="flagellar biosynthesis protein FliT"
+ /protein_id="YP_001570028.1"
+ /db_xref="GI:161502916"
+ /db_xref="InterPro:IPR008622"
+ /translation="MTSTVEFINRWQRIALLSQSLLELAQRGEWELLLQQEVSYLQSI
+ ETVMEKQTPPGITRSIQDMVAGYIKQTLDNEQRLKGLLQQRLDELSGLIGQSTRQKSL
+ NNAYGRLSGMLLVPDAPGAS"
+ misc_feature complement(957937..958299)
+ /locus_tag="SARI_00975"
+ /note="flagellar biosynthesis protein FliT; Provisional;
+ Region: PRK10548"
+ /db_xref="CDD:182538"
+ gene complement(958299..958706)
+ /gene="fliS"
+ /locus_tag="SARI_00976"
+ CDS complement(958299..958706)
+ /gene="fliS"
+ /locus_tag="SARI_00976"
+ /inference="protein motif:HMMPfam:IPR003713"
+ /inference="protein motif:HMMTigr:IPR003713"
+ /inference="similar to AA sequence:INSD:AAV76889.1"
+ /note="flagellin specific chaperone"
+ /codon_start=1
+ /transl_table=11
+ /product="flagellar protein FliS"
+ /protein_id="YP_001570029.1"
+ /db_xref="GI:161502917"
+ /db_xref="InterPro:IPR003713"
+ /translation="MYTASGIKAYAQVSVESAVMSASPHQLIEMLFDGANSALVRARL
+ FLEQGDVVAKGEALSKAINIIDNGLKAGLDREKGGEIATNLSDLYDYMIRRLLQANLR
+ NDAQAIEEVEGLLSNIAEAWKQISPKASFQESR"
+ misc_feature complement(958323..958706)
+ /gene="fliS"
+ /locus_tag="SARI_00976"
+ /note="flagellar protein FliS; Validated; Region: fliS;
+ PRK05685"
+ /db_xref="CDD:235560"
+ gene complement(958721..960124)
+ /gene="fliD"
+ /locus_tag="SARI_00977"
+ CDS complement(958721..960124)
+ /gene="fliD"
+ /locus_tag="SARI_00977"
+ /inference="protein motif:HMMPfam:IPR003481"
+ /inference="protein motif:HMMPfam:IPR010809"
+ /inference="protein motif:HMMPfam:IPR010810"
+ /inference="similar to AA sequence:REFSEQ:ZP_00727315.1"
+ /note="involved in flagellin assembly"
+ /codon_start=1
+ /transl_table=11
+ /product="flagellar capping protein"
+ /protein_id="YP_001570030.1"
+ /db_xref="GI:161502918"
+ /db_xref="InterPro:IPR003481"
+ /db_xref="InterPro:IPR010809"
+ /db_xref="InterPro:IPR010810"
+ /translation="MASFSSLGVGSGLPLDTLLTNLTIAEKKRLNPITQQQTDNTARL
+ TAYGTLKSALEKFQTANSALNKAELFRSSNVTSSTEDLKVSTEAGAAPGIYTISVSQL
+ AQAQTLSTTTKIASTKEALGDAAATRTIKIEQPGRKEPLEITLNKDQTSLDDISKAIN
+ DKDSGISASIVKVKEGEYRLVLTAAEGLDNKMTVSVEGDSKLNDLLAYDSNTGTGEME
+ ELVSAQNAKLTMNGIDIERPGNKITDAPQGVTLELTKKVTDARVTVTKSNEKATEAIK
+ GWVDAYNSLIDTFNTLTKYKEVDPGAETQDKDNGALIGDSVVRTIQTGIRAQFANGGS
+ TGAFKTLNEIGISSDGTTGKLKIDDTKLKKALDENTASVRELLVGDGKETGITTKIAT
+ EVKSYLADDGIIDNAQDSINATLKKLTKQYLAVSASIDDTVARYKAQFSQLDTMMNKL
+ NNTSTYLSQQFTAMNKS"
+ misc_feature complement(958739..960124)
+ /gene="fliD"
+ /locus_tag="SARI_00977"
+ /note="flagellar capping protein; Reviewed; Region: fliD;
+ PRK08032"
+ /db_xref="CDD:236141"
+ misc_feature complement(959828..960097)
+ /gene="fliD"
+ /locus_tag="SARI_00977"
+ /note="Flagellar hook-associated protein 2 C-terminus;
+ Region: FliD_N; pfam02465"
+ /db_xref="CDD:217052"
+ misc_feature complement(958769..959458)
+ /gene="fliD"
+ /locus_tag="SARI_00977"
+ /note="Flagellar hook-associated protein 2 C-terminus;
+ Region: FliD_C; pfam07195"
+ /db_xref="CDD:219327"
+ gene 960141..960362
+ /locus_tag="SARI_00978"
+ CDS 960141..960362
+ /locus_tag="SARI_00978"
+ /inference="similar to AA sequence:REFSEQ:YP_216950.1"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570031.1"
+ /db_xref="GI:161502919"
+ /translation="MQTVVKRVIGNLEAKFNDNFAKIMRGIMMHKAAISQAKKKIGGS
+ EKFSKVRNSGADTRVTVRNRGQQPNNIKL"
+ gene 960380..961654
+ /locus_tag="SARI_00979"
+ CDS 960380..961654
+ /locus_tag="SARI_00979"
+ /inference="protein motif:BlastProDom:IPR001029"
+ /inference="protein motif:FPrintScan:IPR001492"
+ /inference="protein motif:HMMPfam:IPR001029"
+ /inference="protein motif:HMMPfam:IPR001492"
+ /inference="similar to AA sequence:INSD:AAR10709.1"
+ /note="'COG: COG1344 Flagellin and related hook-associated
+ proteins;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570032.1"
+ /db_xref="GI:161502920"
+ /db_xref="InterPro:IPR001029"
+ /db_xref="InterPro:IPR001492"
+ /translation="MAQVINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDD
+ AAGQAIANRFTSNIKGLSQASRNANDGISIAQTTEGALNEINNNLQRVRELSVQAANG
+ SNSGSDLKSIQDEIDQRLNEINRVAEQTDFNGKKVLSQDGQLTIQVGANDGETITIDL
+ QKIDKTELGLDKLDVTKGIATTVSSGASVVGDVKIAAADFDNAKTTGGPAADKLSLTK
+ DDKGNYFVKDDTTTGAAKYYAATVDTTTGKISFDSDKDVTATAGTPPAVTTLSREVKF
+ DGADLKADQSLVKYKDDKGKDLYAIQTLDKDGNASFKSVTFSSDGKTTEGTAVALAAN
+ VDPLAKIDDALKTVDAFRSQLGAVQNRFESAITNLGNTVNNLSSARSRIEDSDYATEV
+ SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR"
+ misc_feature 960380..961651
+ /locus_tag="SARI_00979"
+ /note="flagellin; Validated; Region: PRK06819"
+ /db_xref="CDD:235867"
+ misc_feature 960449..960796
+ /locus_tag="SARI_00979"
+ /note="Bacterial flagellin N-terminal helical region;
+ Region: Flagellin_N; pfam00669"
+ /db_xref="CDD:216053"
+ misc_feature 960953..>961144
+ /locus_tag="SARI_00979"
+ /note="Flagellin D3 domain; Region: Flagellin_D3;
+ pfam08884"
+ /db_xref="CDD:220057"
+ misc_feature 961391..961648
+ /locus_tag="SARI_00979"
+ /note="Bacterial flagellin C-terminal helical region;
+ Region: Flagellin_C; pfam00700"
+ /db_xref="CDD:144340"
+ gene 961733..962938
+ /locus_tag="SARI_00980"
+ CDS 961733..962938
+ /locus_tag="SARI_00980"
+ /inference="similar to AA sequence:SwissProt:Q9KJV4"
+ /note="'KEGG: sec:SC1961 3.4e-179 fliB; N-methylation of
+ lysine residues in flagellin K00599;
+ COG: NOG18602 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570033.1"
+ /db_xref="GI:161502921"
+ /translation="MKEITVTEPAFVTRFSCSGSACRDHCCKGWRIALDKATVKKYLS
+ SKDIAIRTIAKDNIILVKKDVSDWGVIKLPSALGSCPYLDEDRLCLVQKKMGAKALSR
+ TCTIFPRVYHTYKNEVRYSLSLACPEVTAHILNDADAVALNEKTIIQQKYNTAPLFSP
+ QQKLLNLFCLSLINHTASNTDVALYALIKFVMYAQRFPRIDDAALRELEQVYGTLVSQ
+ LQSGSLTQELTNITPDKKFKTSLVLLMQDYFRALPPSRGSYVLDHYIQCLLRGLTAEK
+ GVSMEQKVSDIEASFVRCLQADEQQGGWAFRNIILYKIWENNFPNQPNVDPLRALYII
+ VAEYAFIKLLTAASAHERGRLEWDDVTNIVYSFHSRSQHNSEVAKNFHRHIEMVRTGD
+ DLSMIHLLT"
+ gene 963165..963854
+ /gene="fliA"
+ /locus_tag="SARI_00981"
+ CDS 963165..963854
+ /gene="fliA"
+ /locus_tag="SARI_00981"
+ /inference="protein motif:HMMPfam:IPR007624"
+ /inference="protein motif:HMMPfam:IPR007627"
+ /inference="protein motif:HMMPfam:IPR007630"
+ /inference="protein motif:HMMTigr:IPR012845"
+ /inference="protein motif:ScanRegExp:IPR000943"
+ /inference="protein motif:superfamily:IPR013324"
+ /inference="protein motif:superfamily:IPR013325"
+ /inference="similar to AA sequence:INSD:AAL20868.1"
+ /note="sigma factors are initiation factors that promote
+ the attachment of RNA polymerase to specific initiation
+ sites and are then released; this sigma factor directs
+ late flagellar biosynthesis genes"
+ /codon_start=1
+ /transl_table=11
+ /product="flagellar biosynthesis sigma factor"
+ /protein_id="YP_001570034.1"
+ /db_xref="GI:161502922"
+ /db_xref="InterPro:IPR000943"
+ /db_xref="InterPro:IPR007624"
+ /db_xref="InterPro:IPR007627"
+ /db_xref="InterPro:IPR007630"
+ /db_xref="InterPro:IPR012845"
+ /db_xref="InterPro:IPR013324"
+ /db_xref="InterPro:IPR013325"
+ /translation="MDKHSLWQRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLN
+ AVDRYDALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRNAREVAQAMGQLEQELG
+ RNATETEVAERLGIPVEEYRQMLLDTNNSQLFSYDEWREEHGDSIELVTEEHQKENPL
+ HQLLESDLRQRVMGAIESLPEREQLVLTLYYQEELNLKEIGAVLEVGESRVSQLHSQA
+ IKRLRTKLGKL"
+ misc_feature 963165..963845
+ /gene="fliA"
+ /locus_tag="SARI_00981"
+ /note="flagellar biosynthesis sigma factor; Validated;
+ Region: fliA; PRK06986"
+ /db_xref="CDD:235901"
+ misc_feature 963180..963398
+ /gene="fliA"
+ /locus_tag="SARI_00981"
+ /note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542"
+ /db_xref="CDD:218138"
+ misc_feature 963417..963626
+ /gene="fliA"
+ /locus_tag="SARI_00981"
+ /note="Sigma-70 region 3; Region: Sigma70_r3; pfam04539"
+ /db_xref="CDD:146934"
+ misc_feature 963669..963833
+ /gene="fliA"
+ /locus_tag="SARI_00981"
+ /note="Sigma70, region (SR) 4 refers to the most
+ C-terminal of four conserved domains found in Escherichia
+ coli (Ec) sigma70, the main housekeeping sigma, and
+ related sigma-factors (SFs). A SF is a dissociable subunit
+ of RNA polymerase, it directs bacterial or...; Region:
+ Sigma70_r4; cd06171"
+ /db_xref="CDD:100119"
+ misc_feature order(963702..963704,963732..963734,963750..963755,
+ 963783..963785,963789..963794,963798..963806,
+ 963810..963815,963819..963821)
+ /gene="fliA"
+ /locus_tag="SARI_00981"
+ /note="DNA binding residues [nucleotide binding]"
+ /db_xref="CDD:100119"
+ gene 963913..964464
+ /locus_tag="SARI_00982"
+ CDS 963913..964464
+ /locus_tag="SARI_00982"
+ /inference="protein motif:HMMPfam:IPR004107"
+ /inference="protein motif:superfamily:IPR005107"
+ /inference="similar to AA sequence:INSD:AAL20867.1"
+ /note="'expression activator of the class 2 type of
+ flagellar operons, essential to achieve maximal cell
+ motility; activator of type 1 fimbrial gene expression;
+ cell density-responsive regulator; FliZ in Salmonella
+ typhimurium induces HilA, an activator of invasion genes
+ necessary to achieve full virulence'"
+ /codon_start=1
+ /transl_table=11
+ /product="flagella biosynthesis protein FliZ"
+ /protein_id="YP_001570035.1"
+ /db_xref="GI:161502923"
+ /db_xref="InterPro:IPR004107"
+ /db_xref="InterPro:IPR005107"
+ /translation="MTVQQPKRRPLSRYLKDFKHSQTHCAHCHKLLDRITLVRRGKIV
+ NKIAISQLDMLLDDAAWQREQKEWVALCRFCGDLHCKKQSDFFDIIGFKQYLFEQTEM
+ SHGTVREYVVRLRRLGNYLSEQNISPDLLQDGFLDESLAPWLPETSTNNYRIALRKYQ
+ QYKAHKQIASRQKSPFTASSDIY"
+ misc_feature 963913..964413
+ /locus_tag="SARI_00982"
+ /note="flagella biosynthesis protein FliZ; Provisional;
+ Region: PRK11582"
+ /db_xref="CDD:183213"
+ gene 964563..965411
+ /locus_tag="SARI_00983"
+ CDS 964563..965411
+ /locus_tag="SARI_00983"
+ /inference="protein motif:HMMPfam:IPR001638"
+ /inference="protein motif:HMMSmart:IPR001320"
+ /inference="protein motif:HMMSmart:IPR001638"
+ /inference="protein motif:ScanRegExp:IPR001638"
+ /inference="similar to AA sequence:REFSEQ:NP_456517.1"
+ /note="'KEGG: eci:UTI89_C2121 1.1e-127 fliY;
+ cystine-binding periplasmic protein precursor
+ K02030:K02424;
+ COG: COG0834 ABC-type amino acid transport/signal
+ transduction systems, periplasmic component/domain;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="cystine transporter subunit"
+ /protein_id="YP_001570036.1"
+ /db_xref="GI:161502924"
+ /db_xref="InterPro:IPR001320"
+ /db_xref="InterPro:IPR001638"
+ /translation="MAGHSLWSLTAIFGVIMKLALLGRQALMGVMAVALVAGMSAKSF
+ ADEGLLNKVRERGTLLVGLEGTYPPFSFQGDDGKLTGFEVDFAEALAKHLGVKASLKP
+ TKWDGMLASLDSKRIDVVINQVTISDVRKKKYDFSTPYTVSGVQALVKKGNEGTIKTA
+ AELQGKKVGVGLGTNYEEWLRQHVQGVDIRTYDDDPTKYQDLRVGRIDAILVDRLAAL
+ DLVKKTKGTLAVTGDAFSRQESGVALRKGNEDLLKAVDNAIAEMQKDGTLKAISEKWF
+ GANVTQ"
+ misc_feature 964611..965408
+ /locus_tag="SARI_00983"
+ /note="cystine transporter subunit; Provisional; Region:
+ PRK11260"
+ /db_xref="CDD:183061"
+ misc_feature 964737..965390
+ /locus_tag="SARI_00983"
+ /note="Bacterial periplasmic transport systems use
+ membrane-bound complexes and substrate-bound,
+ membrane-associated, periplasmic binding proteins (PBPs)
+ to transport a wide variety of substrates, such as, amino
+ acids, peptides, sugars, vitamins and inorganic...;
+ Region: PBPb; cd00134"
+ /db_xref="CDD:238078"
+ misc_feature order(964761..964763,964875..964877,964950..964952,
+ 965085..965087,965199..965201)
+ /locus_tag="SARI_00983"
+ /note="substrate binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:238078"
+ misc_feature order(965148..965150,965160..965162,965178..965180)
+ /locus_tag="SARI_00983"
+ /note="membrane-bound complex binding site; other site"
+ /db_xref="CDD:238078"
+ misc_feature 965274..965285
+ /locus_tag="SARI_00983"
+ /note="hinge residues; other site"
+ /db_xref="CDD:238078"
+ gene 965565..966551
+ /locus_tag="SARI_00984"
+ CDS 965565..966551
+ /locus_tag="SARI_00984"
+ /inference="protein motif:HMMPfam:IPR001926"
+ /inference="protein motif:HMMTigr:IPR005966"
+ /inference="similar to AA sequence:SwissProt:Q8ZNT7"
+ /note="catalyzes the formation of pyruvate from
+ D-cysteine"
+ /codon_start=1
+ /transl_table=11
+ /product="D-cysteine desulfhydrase"
+ /protein_id="YP_001570037.2"
+ /db_xref="GI:448236211"
+ /db_xref="InterPro:IPR001926"
+ /db_xref="InterPro:IPR005966"
+ /translation="MPLHHLTRFPRLEFIGAPTPLEYLPRLSDYLGREIYIKRDDVTP
+ IAMGGNKLRKLEFLVADALREGADTLVTAGAIQSNHVRQTAAVAAKLGLHCVALLENP
+ IGTAAENYLTNGNRLLLDLFNTQIEMCDALTDPDAQLQTLATRIEAQGFRPYVIPVGG
+ SSALGAMGYVESALEIAQQCEEVVGLSSVVVASGSAGTHAGLAVGLEHLMPDIELIGV
+ TVSRSVSGQKPKVVALQQAIAGKLALTATADIHLWDDYFAPGYGVPNDAGMEAVKLLA
+ RLEGVLLDPVYTGKAMAGLIDGISQKRFKDEGPILFIHTGGAPALFAYHPHV"
+ misc_feature 965574..966548
+ /locus_tag="SARI_00984"
+ /note="D-cysteine desulfhydrase; Validated; Region:
+ PRK03910"
+ /db_xref="CDD:179673"
+ misc_feature 965619..966515
+ /locus_tag="SARI_00984"
+ /note="Aminocyclopropane-1-carboxylate deaminase (ACCD):
+ Pyridoxal phosphate (PLP)-dependent enzyme which catalyzes
+ the conversion of 1-aminocyclopropane-L-carboxylate (ACC),
+ a precursor of the plant hormone ethylene, to
+ alpha-ketobutyrate and ammonia; Region: ACCD; cd06449"
+ /db_xref="CDD:107210"
+ misc_feature order(965712..965717,965724..965726,965799..965801,
+ 966144..966158,966507..966515)
+ /locus_tag="SARI_00984"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:107210"
+ misc_feature 965715..965717
+ /locus_tag="SARI_00984"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:107210"
+ gene 966572..967240
+ /locus_tag="SARI_00985"
+ CDS 966572..967240
+ /locus_tag="SARI_00985"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="protein motif:HMMTigr:IPR010065"
+ /inference="similar to AA sequence:INSD:AAX65862.1"
+ /note="'KEGG: hpa:HPAG1_0922 1.7e-40 amino acid ABC
+ transporter, permease protein;
+ COG: COG0765 ABC-type amino acid transport system,
+ permease component;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570038.1"
+ /db_xref="GI:161502926"
+ /db_xref="InterPro:IPR000515"
+ /db_xref="InterPro:IPR010065"
+ /translation="MQESIQLVIESLPYLLKGAVFTLQLSIGGMFFGLLLGFVLALMR
+ MSPLWPVRWLARFYISIFRGTPLIAQLFMIYYGLPQFGIELDPIPAAMIGLSLNTAAY
+ TSETLRAAISAIDKGQWEAAASIGMTPWQTLHRAILPQAARVALPPLSNSFISLVKDT
+ SLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSALQNYFENQLNRQE
+ REPK"
+ misc_feature 966614..967234
+ /locus_tag="SARI_00985"
+ /note="ABC-type arginine transport system, permease
+ component [Amino acid transport and metabolism]; Region:
+ ArtQ; COG4215"
+ /db_xref="CDD:226670"
+ misc_feature 966716..967183
+ /locus_tag="SARI_00985"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature order(966734..966745,966749..966778,966785..966790,
+ 966794..966796,966860..966865,966869..966871,
+ 966875..966877,966884..966889,966893..966895,
+ 966905..966910,966917..966919,966968..966970,
+ 967010..967015,967022..967024,967043..967054,
+ 967061..967066,967103..967108,967136..967141,
+ 967148..967153,967157..967162,967169..967174,
+ 967181..967183)
+ /locus_tag="SARI_00985"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(966752..966796,967043..967060)
+ /locus_tag="SARI_00985"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(966794..966796,966845..966847,967061..967063,
+ 967097..967099,967106..967108,967136..967138)
+ /locus_tag="SARI_00985"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(966920..966958,966974..966979,966989..966991)
+ /locus_tag="SARI_00985"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene 967237..967989
+ /locus_tag="SARI_00986"
+ CDS 967237..967989
+ /locus_tag="SARI_00986"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMPfam:IPR013563"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:INSD:AAV76897.1"
+ /note="'KEGG: spt:SPA0918 2.2e-120 yecC; putative ABC
+ transport ATP-binding protein K02028;
+ COG: COG1126 ABC-type polar amino acid transport system,
+ ATPase component;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative amino-acid ABC transporter ATP-binding
+ protein YecC"
+ /protein_id="YP_001570039.1"
+ /db_xref="GI:161502927"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR013563"
+ /translation="MSAIEVTNLVKKFHGQTVLHGIDLKVKTGEVVAIIGPSGSGKTT
+ LLRSINLLEQPEAGTIKVGDIVIDTACSLSQQKGLIRQLRQHVGFVFQSFNLFPHRTV
+ LENIIEGPVIVKGEPKADATALARELLAKVGLAGKETSYPRRLSGGQQQRVAIARALA
+ MRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIITHEMSFARDVADRAIFMD
+ QGRIVEQGPAKTIFADPQHPRTRQFLEKFLMK"
+ misc_feature 967237..967986
+ /locus_tag="SARI_00986"
+ /note="putative amino-acid ABC transporter ATP-binding
+ protein YecC; Provisional; Region: PRK11264"
+ /db_xref="CDD:183063"
+ misc_feature 967246..967902
+ /locus_tag="SARI_00986"
+ /note="ATP-binding cassette domain of the histidine and
+ glutamine transporters; Region: ABC_HisP_GlnQ; cd03262"
+ /db_xref="CDD:213229"
+ misc_feature 967342..967365
+ /locus_tag="SARI_00986"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213229"
+ misc_feature order(967351..967356,967360..967368,967510..967512,
+ 967741..967746,967840..967842)
+ /locus_tag="SARI_00986"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213229"
+ misc_feature 967501..967512
+ /locus_tag="SARI_00986"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213229"
+ misc_feature 967669..967698
+ /locus_tag="SARI_00986"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213229"
+ misc_feature 967729..967746
+ /locus_tag="SARI_00986"
+ /note="Walker B; other site"
+ /db_xref="CDD:213229"
+ misc_feature 967753..967764
+ /locus_tag="SARI_00986"
+ /note="D-loop; other site"
+ /db_xref="CDD:213229"
+ misc_feature 967828..967848
+ /locus_tag="SARI_00986"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213229"
+ misc_feature 967903..>967971
+ /locus_tag="SARI_00986"
+ /note="Oligopeptide/dipeptide transporter, C-terminal
+ region; Region: oligo_HPY; cl07097"
+ /db_xref="CDD:244611"
+ gene 968188..968943
+ /locus_tag="SARI_00987"
+ CDS 968188..968943
+ /locus_tag="SARI_00987"
+ /inference="protein motif:BlastProDom:IPR000792"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000792"
+ /inference="protein motif:HMMPfam:IPR005143"
+ /inference="protein motif:HMMSmart:IPR000792"
+ /inference="protein motif:ScanRegExp:IPR000792"
+ /inference="similar to AA sequence:REFSEQ:NP_456513.1"
+ /note="regulates genes involved in cell division"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional activator SdiA"
+ /protein_id="YP_001570040.1"
+ /db_xref="GI:161502928"
+ /db_xref="InterPro:IPR000792"
+ /db_xref="InterPro:IPR005143"
+ /db_xref="InterPro:IPR011991"
+ /translation="MIINIKGVIIKMQENDFFTWRRAMLLRFQEMATAEGVYTELQYQ
+ TQRLEFDYYSLCVRHPVPFTRPKISLRTTYPQAWVTHYQAENYIAIDPVLKPENFREG
+ HLHWDNVLFHEAQAMWDAAQRFGLRRGVTQSVMLPNRAVGFLSVSRGSLGCSSFTYDE
+ VELRLQLLARESLSALTRLEDDIVMVPEMRFSKREKEILKWTAEGKTSSEIAIILSIS
+ ENTVNFHQKNMQKKFNAPNKTQIACYAAATGLI"
+ misc_feature 968221..968940
+ /locus_tag="SARI_00987"
+ /note="DNA-binding transcriptional activator SdiA;
+ Provisional; Region: PRK10188"
+ /db_xref="CDD:182292"
+ misc_feature 968284..968694
+ /locus_tag="SARI_00987"
+ /note="Autoinducer binding domain; Region: Autoind_bind;
+ pfam03472"
+ /db_xref="CDD:217582"
+ misc_feature 968758..968922
+ /locus_tag="SARI_00987"
+ /note="C-terminal DNA-binding domain of LuxR-like
+ proteins. This domain contains a helix-turn-helix motif
+ and binds DNA. Proteins belonging to this group are
+ response regulators; some act as transcriptional
+ activators, others as transcriptional repressors. Many...;
+ Region: LuxR_C_like; cd06170"
+ /db_xref="CDD:99777"
+ misc_feature order(968761..968769,968806..968814,968836..968841,
+ 968845..968850,968854..968868,968899..968901)
+ /locus_tag="SARI_00987"
+ /note="DNA binding residues [nucleotide binding]"
+ /db_xref="CDD:99777"
+ misc_feature order(968794..968796,968800..968802,968806..968808,
+ 968899..968907,968914..968916)
+ /locus_tag="SARI_00987"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99777"
+ gene complement(969010..969234)
+ /locus_tag="SARI_00988"
+ CDS complement(969010..969234)
+ /locus_tag="SARI_00988"
+ /inference="similar to AA sequence:INSD:AAL20861.1"
+ /note="'COG: NOG13894 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570041.1"
+ /db_xref="GI:161502929"
+ /translation="MSTPDFSTAENNQELATEVNCLKAMLTLMLQAMGQADAGRVILK
+ MEKQIAQMDDKAQAAVFASTVKQIKQAYRQ"
+ misc_feature complement(969013..969234)
+ /locus_tag="SARI_00988"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10613"
+ /db_xref="CDD:182588"
+ gene complement(969231..969386)
+ /locus_tag="SARI_00989"
+ CDS complement(969231..969386)
+ /locus_tag="SARI_00989"
+ /inference="similar to AA sequence:REFSEQ:YP_216939.1"
+ /note="'COG: NOG33125 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570042.1"
+ /db_xref="GI:161502930"
+ /translation="MHHAATFILWVNLQPFDQKTTTAIFSAAYGILRRLNICYRTFSL
+ KHNEENK"
+ gene 969697..970353
+ /locus_tag="SARI_00990"
+ CDS 969697..970353
+ /locus_tag="SARI_00990"
+ /inference="protein motif:BlastProDom:IPR000792"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:FPrintScan:IPR000792"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000792"
+ /inference="protein motif:HMMPfam:IPR001789"
+ /inference="protein motif:HMMSmart:IPR000792"
+ /inference="protein motif:HMMSmart:IPR001789"
+ /inference="protein motif:ScanRegExp:IPR000792"
+ /inference="protein motif:superfamily:IPR011006"
+ /inference="similar to AA sequence:REFSEQ:YP_216937.1"
+ /note="in Escherichia coli the protein UvrY is part of a
+ two-component system along with BarA that is needed for
+ efficient switching between glycolytic and gluconeogenic
+ carbon sources possibly by regulating the Csr system; in
+ Salmonella SirA and BarA regulate virulence gene
+ expression also via the Csr system"
+ /codon_start=1
+ /transl_table=11
+ /product="response regulator"
+ /protein_id="YP_001570043.1"
+ /db_xref="GI:161502931"
+ /db_xref="InterPro:IPR000792"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR011006"
+ /db_xref="InterPro:IPR011991"
+ /translation="MINVLLVDDHELVRAGIRRILEDIKGIKVVGEACCGEDAVKWCR
+ TNAVDVVLMDMNMPGIGGLEATRKIARSTADIKVIMLTVHTENPLPAKVMQAGAAGYL
+ SKGAAPQEVVNAIRSVYTGQRYIASDIAQQMALSQIEPAKTETPFASLSERELQIMLM
+ ITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLTSQ
+ "
+ misc_feature 969697..970350
+ /locus_tag="SARI_00990"
+ /note="response regulator; Provisional; Region: PRK09483"
+ /db_xref="CDD:236538"
+ misc_feature 969709..970050
+ /locus_tag="SARI_00990"
+ /note="Signal receiver domain; originally thought to be
+ unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
+ recently identified in eukaroytes ETR1 Arabidopsis
+ thaliana; this domain receives the signal from the sensor
+ partner in a two-component systems; Region: REC; cd00156"
+ /db_xref="CDD:238088"
+ misc_feature order(969718..969723,969856..969858,969880..969882,
+ 969940..969942,969997..969999,970006..970011)
+ /locus_tag="SARI_00990"
+ /note="active site"
+ /db_xref="CDD:238088"
+ misc_feature 969856..969858
+ /locus_tag="SARI_00990"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238088"
+ misc_feature order(969865..969870,969874..969882)
+ /locus_tag="SARI_00990"
+ /note="intermolecular recognition site; other site"
+ /db_xref="CDD:238088"
+ misc_feature 970006..970014
+ /locus_tag="SARI_00990"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238088"
+ misc_feature 970144..970314
+ /locus_tag="SARI_00990"
+ /note="C-terminal DNA-binding domain of LuxR-like
+ proteins. This domain contains a helix-turn-helix motif
+ and binds DNA. Proteins belonging to this group are
+ response regulators; some act as transcriptional
+ activators, others as transcriptional repressors. Many...;
+ Region: LuxR_C_like; cd06170"
+ /db_xref="CDD:99777"
+ misc_feature order(970147..970155,970192..970200,970222..970227,
+ 970231..970236,970240..970254,970285..970287)
+ /locus_tag="SARI_00990"
+ /note="DNA binding residues [nucleotide binding]"
+ /db_xref="CDD:99777"
+ misc_feature order(970180..970182,970186..970188,970192..970194,
+ 970285..970293,970300..970302,970309..970314)
+ /locus_tag="SARI_00990"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99777"
+ gene 970359..972182
+ /gene="uvrC"
+ /locus_tag="SARI_00991"
+ CDS 970359..972182
+ /gene="uvrC"
+ /locus_tag="SARI_00991"
+ /inference="protein motif:BlastProDom:IPR001162"
+ /inference="protein motif:HMMPfam:IPR000305"
+ /inference="protein motif:HMMPfam:IPR000445"
+ /inference="protein motif:HMMPfam:IPR001162"
+ /inference="protein motif:HMMPfam:IPR001943"
+ /inference="protein motif:HMMSmart:IPR000305"
+ /inference="protein motif:HMMTigr:IPR004791"
+ /inference="protein motif:superfamily:IPR009055"
+ /inference="protein motif:superfamily:IPR010994"
+ /note="The UvrABC repair system catalyzes the recognition
+ and processing of DNA lesions. UvrC both incises the 5'
+ and 3' sides of the lesion. The N-terminal half is
+ responsible for the 3' incision and the C-terminal half is
+ responsible for the 5' incision"
+ /codon_start=1
+ /transl_table=11
+ /product="excinuclease ABC subunit C"
+ /protein_id="YP_001570044.1"
+ /db_xref="GI:161502932"
+ /db_xref="InterPro:IPR000305"
+ /db_xref="InterPro:IPR000445"
+ /db_xref="InterPro:IPR001162"
+ /db_xref="InterPro:IPR001943"
+ /db_xref="InterPro:IPR004791"
+ /db_xref="InterPro:IPR009055"
+ /db_xref="InterPro:IPR010994"
+ /translation="MFDAKAFLKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLSSYF
+ RSNLASRKTEALVAQIQQIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSYPFI
+ FLSGDTHPRLAMHRGAKHAKGEYFGPFPNGYAVRETLALLQKIFPVRQCENSVYRNRS
+ RPCLQYQIGRCLGPCVAGLVSEEEYAQQVEYVRLFLSGKDDQVLTQLIARMEKASQEL
+ AFEEAARIRDQIQAVRRVTERQFVSNTGDDLDVIGVAFDAGMACVHVLFIRQGKVLGS
+ RSYFPKVPGGTELGEVVETFVGQFYLQGSQMRTLPGEILLDFNLSDKMLLADSLSELA
+ GRRIYVQTKPRGDRARYLKLARTNAATALTTKLSQQSTVTQRLTALATVLKLPTVKRM
+ ECFDISHTMGEQTVASCVVFDANGPIRAEYRRYNIAGITPGDDYAAMNQVLRRRYGKA
+ IEESKIPDVILIDGGKGQLAQAKAVFAELDVPWDKHRPLLLGVAKGADRKAGLETLFF
+ EPEGEGFCLPPDSPALHVIQHIRDEAHDHAIGGHRKKRAKVKNTSTLETIEGVGPKRR
+ QMLLKYMGGLQGLRNASVEEIAKVPGISQGLAEKIFWSLKH"
+ misc_feature 970359..972179
+ /gene="uvrC"
+ /locus_tag="SARI_00991"
+ /note="excinuclease ABC subunit C; Validated; Region:
+ uvrC; PRK00558"
+ /db_xref="CDD:234792"
+ misc_feature 970398..970631
+ /gene="uvrC"
+ /locus_tag="SARI_00991"
+ /note="Catalytic GIY-YIG domain of nucleotide excision
+ repair endonucleases UvrC, Cho, and similar proteins;
+ Region: GIY-YIG_UvrC_Cho; cd10434"
+ /db_xref="CDD:198381"
+ misc_feature order(970404..970412,970443..970451)
+ /gene="uvrC"
+ /locus_tag="SARI_00991"
+ /note="GIY-YIG motif/motif A; other site"
+ /db_xref="CDD:198381"
+ misc_feature order(970410..970412,970443..970445,970449..970454,
+ 970473..970475,970485..970487,970590..970592,
+ 970626..970628)
+ /gene="uvrC"
+ /locus_tag="SARI_00991"
+ /note="active site"
+ /db_xref="CDD:198381"
+ misc_feature order(970443..970445,970473..970475,970590..970592)
+ /gene="uvrC"
+ /locus_tag="SARI_00991"
+ /note="catalytic site [active]"
+ /db_xref="CDD:198381"
+ misc_feature order(970443..970445,970473..970475,970590..970592)
+ /gene="uvrC"
+ /locus_tag="SARI_00991"
+ /note="putative DNA binding site [nucleotide binding];
+ other site"
+ /db_xref="CDD:198381"
+ misc_feature 970590..970592
+ /gene="uvrC"
+ /locus_tag="SARI_00991"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:198381"
+ misc_feature 970959..971063
+ /gene="uvrC"
+ /locus_tag="SARI_00991"
+ /note="UvrB/uvrC motif; Region: UVR; pfam02151"
+ /db_xref="CDD:145355"
+ misc_feature 971496..971975
+ /gene="uvrC"
+ /locus_tag="SARI_00991"
+ /note="UvrC Helix-hairpin-helix N-terminal; Region:
+ UvrC_HhH_N; pfam08459"
+ /db_xref="CDD:219854"
+ misc_feature 972084..972167
+ /gene="uvrC"
+ /locus_tag="SARI_00991"
+ /note="Helix-hairpin-helix motif; Region: HHH; pfam00633"
+ /db_xref="CDD:109681"
+ unsure 971099..971222
+ /gene="uvrC"
+ /locus_tag="SARI_00991"
+ /note="Sequence derived from one plasmid subclone"
+ gene 972239..972787
+ /locus_tag="SARI_00992"
+ CDS 972239..972787
+ /locus_tag="SARI_00992"
+ /inference="protein motif:HMMPfam:IPR000462"
+ /inference="protein motif:HMMTigr:IPR004570"
+ /inference="protein motif:ScanRegExp:IPR000462"
+ /inference="similar to AA sequence:SwissProt:Q7CQB9"
+ /note="'KEGG: stt:t0931 4.6e-95 pgsA;
+ phosphotidylglycerophosphate synthetase K00995;
+ COG: COG0558 Phosphatidylglycerophosphate synthase;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphatidylglycerophosphate synthetase"
+ /protein_id="YP_001570045.1"
+ /db_xref="GI:161502933"
+ /db_xref="InterPro:IPR000462"
+ /db_xref="InterPro:IPR004570"
+ /translation="MQFNIPTLLTLFRVILIPFFVVVFYLPFAWAPMVSALIFCIAAI
+ TDWFDGFLARRWNQSTRFGAFLDPVADKVLVAIAMVLVTEHYHSWWVTLPAATMIARE
+ IIISALREWMAELGKRSSVAVSWIGKVKTTAQMVALAWLLWRPNLWVEYAGIALFFVA
+ AVLTLWSMLQYLSAARGDLLDQ"
+ misc_feature 972239..972784
+ /locus_tag="SARI_00992"
+ /note="phosphatidylglycerophosphate synthetase;
+ Provisional; Region: PRK10832"
+ /db_xref="CDD:182763"
+ gene 972939..973011
+ /locus_tag="SARI_00993"
+ tRNA 972939..973011
+ /locus_tag="SARI_00993"
+ /product="tRNA-Gly"
+ gene 973067..973137
+ /locus_tag="SARI_00994"
+ tRNA 973067..973137
+ /locus_tag="SARI_00994"
+ /product="tRNA-Cys"
+ gene 973154..973237
+ /locus_tag="SARI_00995"
+ tRNA 973154..973237
+ /locus_tag="SARI_00995"
+ /product="tRNA-Leu"
+ gene 973517..973822
+ /locus_tag="SARI_00997"
+ CDS 973517..973822
+ /locus_tag="SARI_00997"
+ /inference="similar to AA sequence:INSD:AAL20856.1"
+ /note="'COG: NOG33408 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570047.1"
+ /db_xref="GI:161502935"
+ /translation="MKKVDMPVKYTDNAKLFISFISIGIVGCALLLFFIVYEPDTKIV
+ TYFLPDEYSSFTCNARNFIGYVDANDFAQYIKIIGSTRYSMYCLKKMETGQWSVYAN"
+ gene 973988..974131
+ /locus_tag="SARI_00998"
+ CDS 973988..974131
+ /locus_tag="SARI_00998"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570048.1"
+ /db_xref="GI:161502936"
+ /translation="MAVLVSLSFVLSLPYGDDDAKQSLGRFIDAIVPYSLPPDDLSTN
+ GQR"
+ gene 974037..975476
+ /locus_tag="SARI_00999"
+ CDS 974037..975476
+ /locus_tag="SARI_00999"
+ /inference="protein motif:HMMPfam:IPR000064"
+ /inference="similar to AA sequence:REFSEQ:NP_460896.1"
+ /note="'KEGG: rba:RB11119 0.0028 pipeptidyl-peptidase VI;
+ COG: COG0791 Cell wall-associated hydrolases
+ (invasion-associated proteins);
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570049.1"
+ /db_xref="GI:161502937"
+ /db_xref="InterPro:IPR000064"
+ /translation="MMMQNKAWAVLLMPLCLTACHQMTYRPTAKGEISEKDYIDPTKT
+ RFPLADYSQSVDKWIPPDSADFAIPVIDSTTQQRYFSALKSHYFGMDNESHSPWNAVY
+ ITGLLKKNAGQVRDASIKQFLGDGSTYWGENFRLYSSRWKEGVRGNADTRIDNIYHAS
+ RRGIMVRESLARALPTDDPLFNDPRRAGEGYPFDNLQMSSLRPGTPVYTLTESKDQRW
+ QYVVSPTVTGWVHSEDIASVDQTFVTQWVSLAYKQLGAFISAPVSVHTAGVYYFTGRP
+ GTILPFRYKRAGLFLIAAPVRDSNGRASIHWVWLSDKAFTAMPWKMTPENIAVLMKSM
+ GGAPYGWGNFNFYNDCSAEIRSLLMPFGIFLPRHSTAQVEAAERVVDLSNKSIQMRLD
+ YLTRYGKPFTTLVYIPGHIMLYIGNTTMNGQVVPVTYQNIWGLRPNHANSRSIIGEAV
+ FFPLLRFYPENPELVSLAGKVQFKLGYIE"
+ misc_feature 974571..974732
+ /locus_tag="SARI_00999"
+ /note="SH3 domain of the SH3b1 type; Region: SH3_6;
+ pfam12913"
+ /db_xref="CDD:205144"
+ misc_feature 974751..974897
+ /locus_tag="SARI_00999"
+ /note="SH3 domain of SH3b2 type; Region: SH3_7; pfam12914"
+ /db_xref="CDD:205145"
+ misc_feature 975042..>975296
+ /locus_tag="SARI_00999"
+ /note="NlpC/P60 family; Region: NLPC_P60; cl17555"
+ /db_xref="CDD:248109"
+ gene 975700..976005
+ /locus_tag="SARI_01000"
+ CDS 975700..976005
+ /locus_tag="SARI_01000"
+ /inference="similar to AA sequence:INSD:AAV76906.1"
+ /note="'COG: NOG33353 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570050.1"
+ /db_xref="GI:161502938"
+ /translation="MHFNNRTRSQRDLGELVNKVFEKAVKKEPQPLYTFSLPLLSVQD
+ EIRAYCKKKNIKIGYDTLFMEITFSSDREAVDELIKYFFTENKLYLRGRFYLSAAAV"
+ misc_feature <975724..>975966
+ /locus_tag="SARI_01000"
+ /note="glucose-6-phosphate 1-dehydrogenase; Region:
+ PLN02640"
+ /db_xref="CDD:215344"
+ gene 976444..977109
+ /locus_tag="SARI_01001"
+ CDS 976444..977109
+ /locus_tag="SARI_01001"
+ /inference="protein motif:HMMPfam:IPR004027"
+ /inference="protein motif:HMMTigr:IPR011978"
+ /inference="similar to AA sequence:INSD:AAX65850.1"
+ /note="'COG: COG3318 Predicted metal-binding protein
+ related to the C-terminal domain of SecA;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570051.1"
+ /db_xref="GI:161502939"
+ /db_xref="InterPro:IPR004027"
+ /db_xref="InterPro:IPR011978"
+ /translation="MKMEPLNESDLEWLDDVLTKYNTDHAILDVAELDGLITAVLSSP
+ HPIEPEQWLVAIWGGPAYVPRWTSEKEMTRFMDLVFQHMADTAARLEDYPEQFEPLFG
+ LREVDGHELTIVEEWCFGYMRGVSLSDWSDLPDTLKPALEAIALHGTEENFNLLDKMS
+ PEAFDKSVDAIRIAALELHAWWMAHPQTTPRQMPAKAEVKVGRNDPCPCGSGKKFKQC
+ CLH"
+ misc_feature 976444..977106
+ /locus_tag="SARI_01001"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10396"
+ /db_xref="CDD:236680"
+ misc_feature 976474..976920
+ /locus_tag="SARI_01001"
+ /note="yecA family protein; Region: ygfB_yecA; TIGR02292"
+ /db_xref="CDD:233814"
+ misc_feature 977050..977103
+ /locus_tag="SARI_01001"
+ /note="SEC-C motif; Region: SEC-C; pfam02810"
+ /db_xref="CDD:202406"
+ gene complement(977184..978452)
+ /locus_tag="SARI_01002"
+ CDS complement(977184..978452)
+ /locus_tag="SARI_01002"
+ /inference="protein motif:HMMPfam:IPR002091"
+ /inference="protein motif:HMMTigr:IPR013059"
+ /inference="protein motif:ScanRegExp:IPR013061"
+ /inference="similar to AA sequence:INSD:AAL20852.1"
+ /note="'KEGG: lpl:lp_3010 0.0065 pts23C; cellobiose PTS,
+ EIIC K02761;
+ COG: COG0814 Amino acid permeases;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570052.1"
+ /db_xref="GI:161502940"
+ /db_xref="InterPro:IPR002091"
+ /db_xref="InterPro:IPR013059"
+ /db_xref="InterPro:IPR013061"
+ /translation="MPYPAPRISPFFVTGVVKSVKNRTLGSIFIVAGTTIGAGMLAMP
+ LAAAGVGFGVTLGLLIGLWALMCYTALLLLEVYQHVPADTGLGSLAKRYLGRYGQWLT
+ GFSMLFLMYALTAAYISGAGELLASSINNWVSATLSPAAGVLLFTFVAGGVVCVGTSL
+ VDLFNRFLFSAKIIFLVIMLALLTPHIHKVNLLTLPLQQGLALSAIPVIFTSFGFHGS
+ VPSIVSYMNGNIRRLRGVFITGSGIPLVAYIFWQLATLGSIDSPTFRGLLASHAGLNG
+ LLQALREVVASPHVELAVHLFADLALATSFLGVALGLFDYLADLFQRRSTVSGRMQTG
+ LITFLPPLAFALFYPRGFVMALGYAGVALAVLALLIPAMLVWQCRKHNPQAGYRVAGG
+ TPALALVFICGIVVIGVQFTIAMGFLPEPG"
+ misc_feature complement(977187..978395)
+ /locus_tag="SARI_01002"
+ /note="tyrosine transporter TyrP; Provisional; Region:
+ PRK15132"
+ /db_xref="CDD:185086"
+ misc_feature complement(977244..978377)
+ /locus_tag="SARI_01002"
+ /note="aromatic amino acid transport protein; Region:
+ araaP; TIGR00837"
+ /db_xref="CDD:233146"
+ gene 978622..978861
+ /locus_tag="SARI_01003"
+ CDS 978622..978861
+ /locus_tag="SARI_01003"
+ /inference="similar to AA sequence:INSD:AAL20851.1"
+ /note="'COG: NOG14112 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570053.1"
+ /db_xref="GI:161502941"
+ /translation="MDSIHGHEVLNMMIESGEQYTHTSLEAAIKARFGERARFHTCSA
+ SDMTAAELVAFLAAKGKFIAVEDGFSTHESKICRH"
+ misc_feature 978628..978858
+ /locus_tag="SARI_01003"
+ /note="probable metal-binding protein; Region:
+ matur_matur; TIGR03853"
+ /db_xref="CDD:163565"
+ gene complement(978907..979404)
+ /locus_tag="SARI_01004"
+ CDS complement(978907..979404)
+ /locus_tag="SARI_01004"
+ /inference="protein motif:BlastProDom:IPR001519"
+ /inference="protein motif:Gene3D:IPR012347"
+ /inference="protein motif:HMMPfam:IPR008331"
+ /inference="protein motif:superfamily:IPR009078"
+ /inference="similar to AA sequence:INSD:AAL20850.1"
+ /note="cytoplasmic iron storage protein"
+ /codon_start=1
+ /transl_table=11
+ /product="ferritin"
+ /protein_id="YP_001570054.1"
+ /db_xref="GI:161502942"
+ /db_xref="InterPro:IPR001519"
+ /db_xref="InterPro:IPR008331"
+ /db_xref="InterPro:IPR009078"
+ /db_xref="InterPro:IPR012347"
+ /translation="MLKTEMIDKLNEQMNLELYSSLLYQQMSAWCSYHSFEGAAAFLR
+ RHAQEEMTHMQRLFDYLTDTGSLPRIHTVSSPFAEYTSLDELFRATYEHEQLITQKIN
+ ELAHAAMTSQDYPTFNFLQWYVAEQHEEEKLFKSIIDKLTLAGKSGEGLYFIDKELST
+ LDTQN"
+ misc_feature complement(978931..979392)
+ /locus_tag="SARI_01004"
+ /note="nonheme-containing ferritins; Region:
+ Nonheme_Ferritin; cd01055"
+ /db_xref="CDD:153113"
+ misc_feature complement(978973..979386)
+ /locus_tag="SARI_01004"
+ /note="Ferritin-like domain; Region: Ferritin; pfam00210"
+ /db_xref="CDD:215791"
+ misc_feature complement(order(979015..979020,979027..979029,
+ 979123..979125,979246..979248,979255..979260,
+ 979354..979356))
+ /locus_tag="SARI_01004"
+ /note="ferroxidase diiron center [ion binding]; other
+ site"
+ /db_xref="CDD:153113"
+ gene complement(979753..980088)
+ /locus_tag="SARI_01005"
+ CDS complement(979753..980088)
+ /locus_tag="SARI_01005"
+ /inference="similar to AA sequence:REFSEQ:NP_460890.1"
+ /note="'COG: NOG11332 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570055.1"
+ /db_xref="GI:161502943"
+ /translation="MKPLIFTLLLLALTGCTITRQAQVSEASPISGIVRLTYNQPLFF
+ TSRTDDYVSHGTATRECQQMGYADAVSFGQPVGTCSIYAGSLCLNTRFILSWQCRGVA
+ VPQIMPLYY"
+ misc_feature complement(979795..980016)
+ /locus_tag="SARI_01005"
+ /note="YecR-like lipoprotein; Region: YecR; pfam13992"
+ /db_xref="CDD:222489"
+ unsure 979956..980285
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(980142..980384)
+ /locus_tag="SARI_01007"
+ CDS complement(980142..980384)
+ /locus_tag="SARI_01007"
+ /note="'Psort location: extracellular, including cell
+ wall, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570056.1"
+ /db_xref="GI:161502945"
+ /translation="MLAWLFSIISAIFMVFLLNAGSRACVNHDVSPTLHPYKHNFKFN
+ ETKFRKIKRGSQIFGARRKSPAVTSNQGESVSYSSH"
+ gene 980344..980982
+ /locus_tag="SARI_01006"
+ CDS 980344..980982
+ /locus_tag="SARI_01006"
+ /inference="protein motif:HMMPfam:IPR010553"
+ /inference="similar to AA sequence:INSD:AAL20848.1"
+ /note="'KEGG: stm:STM1933 1.6e-108 hypothetical protein
+ K01806;
+ COG: COG0698 Ribose 5-phosphate isomerase RpiB;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570057.1"
+ /db_xref="GI:161502944"
+ /db_xref="InterPro:IPR010553"
+ /translation="MKIALMMENSQASKNAIIYNELSAVADEKGFPVFNVGMCDENDH
+ HLTYIHLGIMASILLNSKAVDFVVTGCGTGQGALMSLNIHPGVICGYCIDPADAFLFA
+ QINNGNALSLPFAKGFGWGAELNVRFIFEKAFTGRKGEGYPPERKAPQVRNAGILNQV
+ KAAVVKENYLDTLRAIDPELVKTAVSGPRFQECFFENGQNKEIEVFVREILE"
+ misc_feature 980344..980979
+ /locus_tag="SARI_01006"
+ /note="hypothetical protein; Provisional; Region:
+ PRK09273"
+ /db_xref="CDD:181746"
+ misc_feature 980344..980820
+ /locus_tag="SARI_01006"
+ /note="Ribose 5-phosphate isomerase RpiB [Carbohydrate
+ transport and metabolism]; Region: RpiB; COG0698"
+ /db_xref="CDD:223770"
+ misc_feature 980830..980973
+ /locus_tag="SARI_01006"
+ /note="Ribose-5-phosphate isomerase; Region: DUF3666;
+ pfam12408"
+ /db_xref="CDD:204907"
+ gene 981150..981401
+ /locus_tag="SARI_01008"
+ CDS 981150..981401
+ /locus_tag="SARI_01008"
+ /inference="similar to AA sequence:REFSEQ:YP_407573.1"
+ /note="'COG: NOG15359 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570058.1"
+ /db_xref="GI:161502946"
+ /translation="MSHTLNADQELVSDVVACQLVIKQILDVIDVIAPVEVREKMASQ
+ LKNIDFSNHPAAADPVTMRAIQKAIALIELKFTPQGESH"
+ misc_feature 981150..981386
+ /locus_tag="SARI_01008"
+ /note="Protein of unknown function (DUF2766); Region:
+ DUF2766; pfam10964"
+ /db_xref="CDD:151411"
+ gene complement(981488..981991)
+ /locus_tag="SARI_01009"
+ CDS complement(981488..981991)
+ /locus_tag="SARI_01009"
+ /inference="protein motif:BlastProDom:IPR001519"
+ /inference="protein motif:Gene3D:IPR012347"
+ /inference="protein motif:HMMPfam:IPR008331"
+ /inference="protein motif:superfamily:IPR009078"
+ /inference="similar to AA sequence:INSD:AAX65844.1"
+ /note="'KEGG: cel:D1037.3 0.0047 ferritin; D1037.3
+ K00522;
+ COG: COG1528 Ferritin-like protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="ferritin-like protein"
+ /protein_id="YP_001570059.1"
+ /db_xref="GI:161502947"
+ /db_xref="InterPro:IPR001519"
+ /db_xref="InterPro:IPR008331"
+ /db_xref="InterPro:IPR009078"
+ /db_xref="InterPro:IPR012347"
+ /translation="MAAVGMVQKLNTQMNLEFYASNLYLHLSEWCSEHSLTGTATFLR
+ TQAQCNVTQMMRMFNFMKSAGATPIVKAIDVPGDELSSLEDLFQRTLEDYQQRASTLS
+ RLANEAKALNDVSTLDFLHTLEKEQQQDGVLLQTILEEVRSAKQAGLCLAQTDQHLLN
+ VVTYQPH"
+ misc_feature complement(981518..981976)
+ /locus_tag="SARI_01009"
+ /note="nonheme-containing ferritins; Region:
+ Nonheme_Ferritin; cd01055"
+ /db_xref="CDD:153113"
+ misc_feature complement(981560..981973)
+ /locus_tag="SARI_01009"
+ /note="Ferritin-like domain; Region: Ferritin; pfam00210"
+ /db_xref="CDD:215791"
+ misc_feature complement(order(981602..981607,981614..981616,
+ 981710..981712,981833..981835,981842..981847,
+ 981941..981943))
+ /locus_tag="SARI_01009"
+ /note="ferroxidase diiron center [ion binding]; other
+ site"
+ /db_xref="CDD:153113"
+ gene 982539..983096
+ /locus_tag="SARI_01010"
+ CDS 982539..983096
+ /locus_tag="SARI_01010"
+ /inference="protein motif:HMMPfam:IPR002818"
+ /inference="protein motif:HMMTigr:IPR006287"
+ /inference="similar to AA sequence:REFSEQ:NP_460887.1"
+ /note="'KEGG: ppu:PP_2725 1.2e-14 pfpI; protease PfpI
+ K05520;
+ COG: COG0693 Putative intracellular protease/amidase;
+ Psort location: extracellular, including cell wall, score:
+ 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570060.1"
+ /db_xref="GI:161502948"
+ /db_xref="InterPro:IPR002818"
+ /db_xref="InterPro:IPR006287"
+ /translation="MKKVAVLLAPGFEEAEAIVTIDILRRLHIDVETLACAESRAVVS
+ YHDIPMVADNTLSERQQALFDAVVLPGGPQGSANLADNPAVIAFVARHDAAGKLICPI
+ CSAAARVLGAHGLLKGRRYVCSGELWKAVQEGIYVDAPVVEDGNLISGKGLGHVFDFA
+ LTLAARLLEDDASVREQADHIYYPW"
+ misc_feature 982545..983090
+ /locus_tag="SARI_01010"
+ /note="DJ-1 family protein; Region: not_thiJ; TIGR01383"
+ /db_xref="CDD:213612"
+ misc_feature 982548..983039
+ /locus_tag="SARI_01010"
+ /note="Type 1 glutamine amidotransferase (GATase1)-like
+ domain found in Human DJ-1; Region: GATase1_DJ-1; cd03135"
+ /db_xref="CDD:153229"
+ misc_feature 982845..982847
+ /locus_tag="SARI_01010"
+ /note="conserved cys residue [active]"
+ /db_xref="CDD:153229"
+ gene 983134..983457
+ /locus_tag="SARI_01011"
+ CDS 983134..983457
+ /locus_tag="SARI_01011"
+ /inference="protein motif:HMMPfam:IPR001851"
+ /inference="similar to AA sequence:REFSEQ:YP_407576.1"
+ /note="'KEGG: eco:b4460 1.0e-35 araH; fused L-arabinose
+ transporter subunits of ABC superfamily: membrane
+ components K02057;
+ COG: COG1172 Ribose/xylose/arabinose/galactoside ABC-type
+ transport systems, permease components;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570061.1"
+ /db_xref="GI:161502949"
+ /db_xref="InterPro:IPR001851"
+ /translation="MIKIAVPDGEITLNAIIQVSHLTSAQPMTSLGYELILMSACVLG
+ GVFLQGGIGKISYVVAGVLILGTVENAMSLLTISPFAQYVVRGLIVLAAVIFDRYKQK
+ SKRTI"
+ misc_feature <983176..983424
+ /locus_tag="SARI_01011"
+ /note="Transmembrane subunit (TM) of Escherichia coli AraH
+ and related proteins. E. coli AraH is the TM of a
+ Periplasmic Binding Protein (PBP)-dependent ATP-Binding
+ Cassette (ABC) transporter involved in the uptake of the
+ monosaccharide arabinose. This group...; Region:
+ TM_PBP1_transp_AraH_like; cd06579"
+ /db_xref="CDD:119321"
+ gene 983620..984423
+ /locus_tag="SARI_01012"
+ CDS 983620..984423
+ /locus_tag="SARI_01012"
+ /inference="protein motif:HMMPfam:IPR003337"
+ /inference="protein motif:HMMTigr:IPR003337"
+ /inference="protein motif:HMMTigr:IPR006379"
+ /inference="similar to AA sequence:REFSEQ:YP_150227.1"
+ /note="biosynthetic; catalyzes the formation of trehalose
+ and phosphate from trehalose-6-phosphate; expression is
+ increased under osmotic stress and induced during the
+ transition to stationary phase and by decreased
+ temperature"
+ /codon_start=1
+ /transl_table=11
+ /product="trehalose-6-phosphate phosphatase"
+ /protein_id="YP_001570062.2"
+ /db_xref="GI:448236212"
+ /db_xref="InterPro:IPR003337"
+ /db_xref="InterPro:IPR006379"
+ /translation="MAEPLTVSPELTANYAYFFDLDGTLAEIKPHPDQVVVPHKILQL
+ LDRLAAHNAGALALISGRSMTELDALAKPFRFPLAGVHGAERRDINGKTYVVSLPESV
+ VRQVEELLRSTLAELPGAELETKGMAFALHYRQAPEHEAALLALSQHVTQHWPQLALQ
+ PGKCVVEIKPKGTNKGEAIASFMQEAPFAGRIPVFVGDDLTDEVGFGVVNHAGGISVK
+ VGVGTTQAAWRLESVPDVWRWLEQINYPQQEQEVMNNRRDGYESFSRSI"
+ misc_feature 983620..984420
+ /locus_tag="SARI_01012"
+ /note="trehalose-6-phosphate phosphatase; Provisional;
+ Region: PRK10187"
+ /db_xref="CDD:182291"
+ misc_feature 983620..984408
+ /locus_tag="SARI_01012"
+ /note="Trehalose-6-phosphatase [Carbohydrate transport and
+ metabolism]; Region: OtsB; COG1877"
+ /db_xref="CDD:224789"
+ gene 984392..985819
+ /locus_tag="SARI_01013"
+ CDS 984392..985819
+ /locus_tag="SARI_01013"
+ /inference="protein motif:HMMPfam:IPR001830"
+ /inference="protein motif:HMMTigr:IPR012766"
+ /inference="similar to AA sequence:INSD:AAL20844.1"
+ /note="'KEGG: stt:t0949 3.9e-256 otsA;
+ trehalose-6-phosphate synthase K00697;
+ COG: COG0380 Trehalose-6-phosphate synthase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="trehalose-6-phosphate synthase"
+ /protein_id="YP_001570063.1"
+ /db_xref="GI:161502951"
+ /db_xref="InterPro:IPR001830"
+ /db_xref="InterPro:IPR012766"
+ /translation="MAMSRLVVVSNRIAPPDNKGGAGGLAVGVLGALKAAGGLWFGWS
+ GETGNEDEPLKKVTKGNITWASFNLSEQDYEDYYCQFSNAVLWPAFHYRLDLVQFQRP
+ AWEGYMRVNALLADKLLPLIKENDIIWVHDYHLLPFASELRKRGVNNRIGFFLHIPFP
+ TPEIFNALPPHDELLEQLCDFDLLGFQTENDRLAFLDSLSSQTRVTTRSGKHHIAWGK
+ DFQTEVYPIGIEPDEIALQAAGPLPPKLVQLKAELKNVKNIFSVERLDYSKGLPERFL
+ AYEALLENYPQHRGKIRYTQIAPTSRGEVQAYQDIRHQLETEAGRINGRYGQLGWTPL
+ YYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEFVAAQDPANPGVLVLSQFAGA
+ ANELTSALIVNPYDRDDVAAALNRALTMPLAERISRHAEMLDVIVKNDINRWQERFIH
+ DLKEVTPRSAERRQQNNVATFPKLA"
+ misc_feature 984404..985753
+ /locus_tag="SARI_01013"
+ /note="alpha,alpha-trehalose-phosphate synthase
+ [UDP-forming]; Region: trehalose_OtsA; TIGR02400"
+ /db_xref="CDD:233848"
+ misc_feature 984404..985747
+ /locus_tag="SARI_01013"
+ /note="Trehalose-6-Phosphate Synthase (TPS) is a
+ glycosyltransferase that catalyses the synthesis of
+ alpha,alpha-1,1-trehalose-6-phosphate from
+ glucose-6-phosphate using a UDP-glucose donor. It is a key
+ enzyme in the trehalose synthesis pathway. Trehalose is
+ a...; Region: GT1_TPS; cd03788"
+ /db_xref="CDD:99963"
+ misc_feature order(984425..984427,984485..984490,984623..984625,
+ 984785..984787,984791..984793,984857..984859,
+ 985181..985183,985196..985198,985427..985429,
+ 985490..985495,985502..985504)
+ /locus_tag="SARI_01013"
+ /note="active site"
+ /db_xref="CDD:99963"
+ misc_feature 985160..985186
+ /locus_tag="SARI_01013"
+ /note="homotetramer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99963"
+ gene complement(985837..986265)
+ /locus_tag="SARI_01014"
+ CDS complement(985837..986265)
+ /locus_tag="SARI_01014"
+ /inference="protein motif:Gene3D:IPR006016"
+ /inference="protein motif:HMMPfam:IPR006016"
+ /inference="similar to AA sequence:INSD:AAV76917.1"
+ /note="'ppGpp-dependent; membrane-associated, stress
+ protein produced under conditions of nutrient deprivation,
+ osmotic shock and oxidative stress'"
+ /codon_start=1
+ /transl_table=11
+ /product="universal stress protein UspC"
+ /protein_id="YP_001570064.1"
+ /db_xref="GI:161502952"
+ /db_xref="InterPro:IPR006016"
+ /translation="MSYTHILVAVAVTPESHQLLAKAVSIARPVQAKISLITLASDPE
+ LYNQFAAPMMEDLRAVMHEETKNFLEMLGKKADYPIEQTFITYGELSPHIIDVCRKHH
+ VDLVICGNHNHSFFSRASCSAKSVVSASQADVLLVPLAGD"
+ misc_feature complement(985918..986253)
+ /locus_tag="SARI_01014"
+ /note="Usp: Universal stress protein family. The universal
+ stress protein Usp is a small cytoplasmic bacterial
+ protein whose expression is enhanced when the cell is
+ exposed to stress agents. Usp enhances the rate of cell
+ survival during prolonged exposure to...; Region:
+ USP_Like; cd00293"
+ /db_xref="CDD:238182"
+ misc_feature complement(order(985930..985935,985939..985944,
+ 986149..986151,986233..986241))
+ /locus_tag="SARI_01014"
+ /note="Ligand Binding Site [chemical binding]; other site"
+ /db_xref="CDD:238182"
+ gene 987043..987393
+ /locus_tag="SARI_01015"
+ CDS 987043..987393
+ /locus_tag="SARI_01015"
+ /inference="protein motif:BlastProDom:IPR007911"
+ /inference="protein motif:HMMPfam:IPR007911"
+ /inference="similar to AA sequence:INSD:AAV76919.1"
+ /note="with FlhC is involved in the activation of class 2
+ flagellar genes and is involved in the regulation of a
+ number of other genetic systems"
+ /codon_start=1
+ /transl_table=11
+ /product="transcriptional activator FlhD"
+ /protein_id="YP_001570065.1"
+ /db_xref="GI:161502953"
+ /db_xref="InterPro:IPR007911"
+ /translation="MGTMHTSELLKHIYDINLSYLLLAQRLIVQDKASAMFRLGINEE
+ MANTLGALTLPQMVKLAETNQLVCHFRFDDHQTITRLTQDSRVDDLQQIHTGIMLSTR
+ LLNEADETARKKRA"
+ misc_feature 987052..987360
+ /locus_tag="SARI_01015"
+ /note="transcriptional activator FlhD; Provisional;
+ Region: PRK02909"
+ /db_xref="CDD:179497"
+ gene 987396..987974
+ /locus_tag="SARI_01016"
+ CDS 987396..987974
+ /locus_tag="SARI_01016"
+ /inference="protein motif:HMMPfam:IPR007944"
+ /inference="protein motif:superfamily:IPR009079"
+ /inference="similar to AA sequence:INSD:AAB96640.1"
+ /note="With FlhD is involved in the activation of class 2
+ flagellar genes and as well as a number of other genetic
+ systems"
+ /codon_start=1
+ /transl_table=11
+ /product="transcriptional activator FlhC"
+ /protein_id="YP_001570066.1"
+ /db_xref="GI:161502954"
+ /db_xref="InterPro:IPR007944"
+ /db_xref="InterPro:IPR009079"
+ /translation="MSEKSIVQEARDIQLAMELINLGARLQMLESETQLSRGRLIKLY
+ KELRGSPPPKGMLPFSTDWFMTWEQNIHASMFCNAWQFLLKTGLCSGVDAVIKAYRLY
+ LEQCPQPPEGPLLALTRAWTLVRFVESGLLELSSCNCCGGNFITHAHQPVGSFACSLC
+ QPPSRAVKRRKLSRDAADIIPQLLDEQIEEAV"
+ misc_feature 987396..987956
+ /locus_tag="SARI_01016"
+ /note="transcriptional activator FlhC; Provisional;
+ Region: PRK12722"
+ /db_xref="CDD:237181"
+ gene 988099..988986
+ /locus_tag="SARI_01017"
+ CDS 988099..988986
+ /locus_tag="SARI_01017"
+ /inference="protein motif:ScanRegExp:IPR000540"
+ /inference="similar to AA sequence:INSD:AAC45265.1"
+ /note="With MotB forms the ion channels that couple
+ flagellar rotation to proton/sodium motive force across
+ the membrane and forms the stator elements of the rotary
+ flagellar machine"
+ /codon_start=1
+ /transl_table=11
+ /product="flagellar motor protein MotA"
+ /protein_id="YP_001570067.1"
+ /db_xref="GI:161502955"
+ /db_xref="InterPro:IPR000540"
+ /translation="MLILLGYLVVIGTVFGGYVMTGGHLGALYQPAELVIIGGAGIGA
+ FIVGNNGKAIKGTMKAIPLLFRRSKYTKTMYMDLLALLYRLMAKSRQQGMFSLERDIE
+ NPKESEIFASYPRILADAVMLDFIVDYLRLIISGNMNTFEIEALMDEEIETHESESEV
+ PANSLAMVGDSLPAFGIVAAVMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYG
+ FISPLATVLRQKSAETTKMMQCVKITLLSNLNGYAPPIAVEFGRKTLYSSERPSFIEL
+ EEHVRAVRNPNQQQTTEEA"
+ misc_feature 988099..988953
+ /locus_tag="SARI_01017"
+ /note="Flagellar motor component [Cell motility and
+ secretion]; Region: MotA; COG1291"
+ /db_xref="CDD:224210"
+ misc_feature 988099..988947
+ /locus_tag="SARI_01017"
+ /note="flagellar motor protein MotA; Validated; Region:
+ PRK09110"
+ /db_xref="CDD:181655"
+ gene 988983..989912
+ /gene="motB"
+ /locus_tag="SARI_01018"
+ CDS 988983..989912
+ /gene="motB"
+ /locus_tag="SARI_01018"
+ /inference="protein motif:BlastProDom:IPR006665"
+ /inference="protein motif:HMMPfam:IPR006665"
+ /inference="similar to AA sequence:INSD:AAV76922.1"
+ /note="with MotA forms the ion channels that couple
+ flagellar rotation to proton/sodium motive force across
+ the membrane and forms the stator elements of the rotary
+ flagellar machine"
+ /codon_start=1
+ /transl_table=11
+ /product="flagellar motor protein MotB"
+ /protein_id="YP_001570068.1"
+ /db_xref="GI:161502956"
+ /db_xref="InterPro:IPR006665"
+ /translation="MKNQAHPIVVVKRRKHKPHGGGAHGSWKIAYADFMTAMMAFFLV
+ MWLISISSPKELIQLAEYFRTPLATAVTGGNRIANSESPIPGGGDDYTQQQGEVEKQP
+ NIDELKKRMEQSRLNKLRGDLDQLIESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRP
+ MFKTGSAEVEPYMRDILRAIAPVLNGIPNRISLAGHTDDFPYANGEKGYSNWELSADR
+ ANASRRELVAGGLDNGKVLRVVGMAATMRLSDRGPDDAINRRISLLVLNKQAEQAILH
+ ENAESQNEPVSVLQQPAAVPPASVPTSPQAEPR"
+ misc_feature 989007..989183
+ /gene="motB"
+ /locus_tag="SARI_01018"
+ /note="Membrane MotB of proton-channel complex MotA/MotB;
+ Region: MotB_plug; pfam13677"
+ /db_xref="CDD:222312"
+ misc_feature 989016..989789
+ /gene="motB"
+ /locus_tag="SARI_01018"
+ /note="Flagellar motor protein [Cell motility and
+ secretion]; Region: MotB; COG1360"
+ /db_xref="CDD:224279"
+ misc_feature 989466..989777
+ /gene="motB"
+ /locus_tag="SARI_01018"
+ /note="Peptidoglycan binding domains similar to the
+ C-terminal domain of outer-membrane protein OmpA; Region:
+ OmpA_C-like; cd07185"
+ /db_xref="CDD:143586"
+ misc_feature order(989472..989477,989571..989576,989595..989597,
+ 989607..989609,989613..989615,989622..989624,
+ 989745..989747,989757..989759)
+ /gene="motB"
+ /locus_tag="SARI_01018"
+ /note="ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:143586"
+ gene 989923..991941
+ /locus_tag="SARI_01019"
+ CDS 989923..991941
+ /locus_tag="SARI_01019"
+ /inference="protein motif:BlastProDom:IPR008208"
+ /inference="protein motif:Gene3D:IPR003594"
+ /inference="protein motif:HMMPfam:IPR002545"
+ /inference="protein motif:HMMPfam:IPR003594"
+ /inference="protein motif:HMMPfam:IPR004105"
+ /inference="protein motif:HMMPfam:IPR008207"
+ /inference="protein motif:HMMSmart:IPR002545"
+ /inference="protein motif:HMMSmart:IPR003594"
+ /inference="protein motif:HMMSmart:IPR008207"
+ /inference="protein motif:ScanRegExp:IPR000629"
+ /inference="protein motif:superfamily:IPR002545"
+ /inference="protein motif:superfamily:IPR003594"
+ /inference="protein motif:superfamily:IPR008207"
+ /inference="protein motif:superfamily:IPR009082"
+ /note="chemotactic sensory histidine kinase in
+ two-component regulatory system with CheB and CheY;
+ sensory histidine kinase/signal sensing protein; CheA is
+ the histidine kinase component"
+ /codon_start=1
+ /transl_table=11
+ /product="chemotaxis protein CheA"
+ /protein_id="YP_001570069.1"
+ /db_xref="GI:161502957"
+ /db_xref="InterPro:IPR000629"
+ /db_xref="InterPro:IPR002545"
+ /db_xref="InterPro:IPR003594"
+ /db_xref="InterPro:IPR004105"
+ /db_xref="InterPro:IPR008207"
+ /db_xref="InterPro:IPR008208"
+ /db_xref="InterPro:IPR009082"
+ /translation="MDISDFYQTFFDEADELLADMEQHLLDLAPESPDAEQLNAIFRA
+ AHSIKGGAGTFGFTILQETTHLMENLLDAARRGEMQLNTDIINLFLETKDIMQEQLDA
+ YKNSEEPDAASFEYICNALRQLALEAKGETTPVVVETAALSAATQEERVAETEAPHDE
+ SKLRIVLSRLKASEVDLLEEELGNLATLTDVVKGGDSLSATLDGSVAEDDIVAVLCFV
+ IEADQIAFEKVVAAPVEKAQEKTEAAPTAPPAAVAPVAKSAAHEHHAGRAEREKPARE
+ RESTSIRVAVEKVDQLINLVGELVITQSMLAQRSNELDPVNHGDLITSMGQLQRNARD
+ LQESVMSIRMMPMEYVFSRFPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPL
+ THLVRNSLDHGIEMPEKRLEAGKNVVGNLILSAEHQGGNICIEVTDDGAGLNRERILA
+ KAISQGMAVNENMTDDEVGMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQEMGGHVE
+ IQSKQGSGTTIRILLPLTLAILDGMSVRVAGEVFILPLNAVMESLQPREEDLHPLAGG
+ ERVLEVRGEYLPLVELWKVFDVEGAKTEATQGIVVILQSAGRRYALLVDQLIGQHQVV
+ VKNLESNYRKVPGISAATILGDGSVALIVDVSALQGLNREQRMAITAA"
+ misc_feature 989923..991938
+ /locus_tag="SARI_01019"
+ /note="chemotaxis protein CheA; Provisional; Region:
+ PRK10547"
+ /db_xref="CDD:236712"
+ misc_feature 989929..990225
+ /locus_tag="SARI_01019"
+ /note="Histidine Phosphotransfer domain, involved in
+ signalling through a two part component systems in which
+ an autophosphorylating histidine protein kinase serves as
+ a phosphoryl donor to a response regulator protein; the
+ response regulator protein is...; Region: HPT; cd00088"
+ /db_xref="CDD:238041"
+ misc_feature order(990058..990060,990067..990072,990115..990117,
+ 990124..990126)
+ /locus_tag="SARI_01019"
+ /note="putative binding surface; other site"
+ /db_xref="CDD:238041"
+ misc_feature 990058..990060
+ /locus_tag="SARI_01019"
+ /note="active site"
+ /db_xref="CDD:238041"
+ misc_feature 990412..990603
+ /locus_tag="SARI_01019"
+ /note="CheY binding; Region: CheY-binding; pfam09078"
+ /db_xref="CDD:204125"
+ misc_feature 990757..990948
+ /locus_tag="SARI_01019"
+ /note="Signal transducing histidine kinase, homodimeric
+ domain; Region: H-kinase_dim; pfam02895"
+ /db_xref="CDD:217273"
+ misc_feature 991084..991491
+ /locus_tag="SARI_01019"
+ /note="Histidine kinase-like ATPases; This family includes
+ several ATP-binding proteins for example: histidine
+ kinase, DNA gyrase B, topoisomerases, heat shock protein
+ HSP90, phytochrome-like ATPases and DNA mismatch repair
+ proteins; Region: HATPase_c; cd00075"
+ /db_xref="CDD:238030"
+ misc_feature order(991102..991104,991114..991116,991123..991125,
+ 991228..991230,991234..991236,991240..991242,
+ 991246..991251,991390..991401,991447..991449,
+ 991453..991455,991468..991473,991477..991479)
+ /locus_tag="SARI_01019"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature 991114..991116
+ /locus_tag="SARI_01019"
+ /note="Mg2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature order(991240..991242,991246..991248,991390..991392,
+ 991396..991398)
+ /locus_tag="SARI_01019"
+ /note="G-X-G motif; other site"
+ /db_xref="CDD:238030"
+ misc_feature 991501..991896
+ /locus_tag="SARI_01019"
+ /note="CheA regulatory domain; CheA is a histidine protein
+ kinase present in bacteria and archea. Activated by the
+ chemotaxis receptor a histidine phosphoryl group from CheA
+ is passed directly to an aspartate in the response
+ regulator CheY. This signalling...; Region: CheA_reg;
+ cd00731"
+ /db_xref="CDD:238373"
+ gene 991962..992465
+ /locus_tag="SARI_01020"
+ CDS 991962..992465
+ /locus_tag="SARI_01020"
+ /inference="protein motif:HMMPfam:IPR002545"
+ /inference="protein motif:HMMSmart:IPR002545"
+ /inference="protein motif:superfamily:IPR002545"
+ /inference="similar to AA sequence:SwissProt:P06110"
+ /note="'KEGG: eci:UTI89_C2090 1.9e-75 cheW; CheW positive
+ regulator of CheA protein activity K03408;
+ COG: COG0835 Chemotaxis signal transduction protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="purine-binding chemotaxis protein"
+ /protein_id="YP_001570070.1"
+ /db_xref="GI:161502958"
+ /db_xref="InterPro:IPR002545"
+ /translation="MTGMSNVSKLAGEPSGQEFLVFTLGDEEYGIDILKVQEIRGYDQ
+ VTRIANTPAFIKGVTNLRGVIVPIVDLRVKFCAGDVEYDDNTVVIVLNLGQRVVGIVV
+ DGVSDVLSLTAEQIRPAPEFAVTLSTEYLTGLGALGERMLILVNIEKLLNSEEMALLD
+ IAASHVA"
+ misc_feature 992007..992426
+ /locus_tag="SARI_01020"
+ /note="CheW, a small regulator protein, unique to the
+ chemotaxis signalling in prokaryotes and archea. CheW
+ interacts with the histidine kinase CheA, most likely with
+ the related regulatory domain of CheA. CheW is proposed to
+ form signalling arrays together...; Region: CheW; cd00732"
+ /db_xref="CDD:238374"
+ misc_feature order(992139..992156,992238..992240,992244..992246,
+ 992403..992426)
+ /locus_tag="SARI_01020"
+ /note="putative CheA interaction surface; other site"
+ /db_xref="CDD:238374"
+ gene complement(992509..992769)
+ /locus_tag="SARI_01021"
+ CDS complement(992509..992769)
+ /locus_tag="SARI_01021"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570071.1"
+ /db_xref="GI:161502959"
+ /translation="MVNKNLVYVWGINHWRNISSYRSRIDLKNHIYQFIKLNACELTL
+ RLSRIYSFLCDHDHTNTVKQSGQNEEVQGEGDEDEISSLVEA"
+ gene 992830..993423
+ /locus_tag="SARI_01022"
+ CDS 992830..993423
+ /locus_tag="SARI_01022"
+ /inference="protein motif:Gene3D:IPR000259"
+ /inference="protein motif:HMMPfam:IPR007893"
+ /inference="protein motif:superfamily:IPR008966"
+ /inference="similar to AA sequence:INSD:ABP61131.1"
+ /note="'KEGG: chu:CHU_0838 0.0041 CHU large protein;
+ uncharacterized K01238;
+ COG: COG5430 Uncharacterized secreted protein;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570072.1"
+ /db_xref="GI:161502960"
+ /db_xref="InterPro:IPR000259"
+ /db_xref="InterPro:IPR007893"
+ /db_xref="InterPro:IPR008966"
+ /translation="MRGWGDKKMNKIYLVLVAAGLASGALSPAFAVTSNGTIGATLTL
+ TNGCLINGSPGQNGINFGTLDFGTHPATFSELTTQLTGAGGGNSFGIQCTTANYTVQV
+ TGNTNVTAPGTTIGTPGTPARYLMNSANTSQGVAYRLYSDSSFNNEITNNTPIPKANT
+ TAGVDNYTLYGRIQGGGNSVTVNPGIYTDTINVSVIY"
+ misc_feature 992929..993411
+ /locus_tag="SARI_01022"
+ /note="Spore Coat Protein U domain; Region: SCPU;
+ pfam05229"
+ /db_xref="CDD:218513"
+ gene 993488..993976
+ /locus_tag="SARI_01023"
+ CDS 993488..993976
+ /locus_tag="SARI_01023"
+ /inference="protein motif:HMMPfam:IPR007893"
+ /inference="similar to AA sequence:INSD:ABP61130.1"
+ /note="'COG: COG5430 Uncharacterized secreted protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570073.1"
+ /db_xref="GI:161502961"
+ /db_xref="InterPro:IPR007893"
+ /translation="MLALLGGMAPPLPAVTTQSFQLNATITPGCSVATGSGGTLGTLN
+ FGTYSGVENRQINTRFVPGTTVNLACTPGVALSMSIDGGRQYTSVRNMQRSGGSERVA
+ YRLYSSASLAANSEIGVNQSVPVLYTDSNNIALPLFSAAFLSGFSPAGTYSDQLTVTL
+ SW"
+ misc_feature 993533..993964
+ /locus_tag="SARI_01023"
+ /note="Spore Coat Protein U domain; Region: SCPU;
+ pfam05229"
+ /db_xref="CDD:218513"
+ gene 993987..994748
+ /locus_tag="SARI_01024"
+ CDS 993987..994748
+ /locus_tag="SARI_01024"
+ /inference="protein motif:Gene3D:IPR001829"
+ /inference="protein motif:superfamily:IPR008962"
+ /inference="similar to AA sequence:REFSEQ:YP_001177180.1"
+ /note="'COG: COG3121 P pilus assembly protein, chaperone
+ PapD;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570074.1"
+ /db_xref="GI:161502962"
+ /db_xref="InterPro:IPR001829"
+ /db_xref="InterPro:IPR008962"
+ /translation="MMKFTVLFRRVLLALAGLFFSLGANSGAAILLWPIDPWLAAERN
+ ASELWIENRGDAPTTMQVRIVRWRQQGGFERYQNQQDVVASPPIVRIEKGNKQLIRLI
+ KQTKAPDGAEQAYRIIVDEIPSSDNAGTPPMGLKIQMRYSLPLFVYGQGIATWPGEEH
+ HARASVPQLQWRVIRENGAPFLEVRNQGAVHVRLSKTSVRQGSETRSLADGLLGYVLP
+ GSYRRWPLPPGMTQPTELTATINAQGGQWQSGPTR"
+ misc_feature 994068..994724
+ /locus_tag="SARI_01024"
+ /note="P pilus assembly protein, chaperone PapD [Cell
+ motility and secretion / Intracellular trafficking and
+ secretion]; Region: FimC; COG3121"
+ /db_xref="CDD:225663"
+ misc_feature 994104..994445
+ /locus_tag="SARI_01024"
+ /note="Gram-negative pili assembly chaperone, N-terminal
+ domain; Region: Pili_assembly_N; pfam00345"
+ /db_xref="CDD:215870"
+ misc_feature 994530..994724
+ /locus_tag="SARI_01024"
+ /note="Gram-negative pili assembly chaperone, C-terminal
+ domain; Region: Pili_assembly_C; pfam02753"
+ /db_xref="CDD:217216"
+ gene 994724..997096
+ /locus_tag="SARI_01025"
+ CDS 994724..997096
+ /locus_tag="SARI_01025"
+ /inference="protein motif:HMMPfam:IPR000015"
+ /note="'COG: COG3188 P pilus assembly protein, porin PapC;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570075.1"
+ /db_xref="GI:161502963"
+ /db_xref="InterPro:IPR000015"
+ /translation="MAVWPHALSGVAMFLVSSVYAGDDALPPPPDGEVMNEQAVFHLT
+ LIINHFDSKQVVPVTWRQNDFYVASVDLQRAGLPADKLPPGEVNMSQLSGVKTEYDSG
+ RQRLLLSVPRDWLPERPVSFGGEPTQITPQNGQGALLNYDFYTSHTQHGDGQASLWHE
+ LRFFNDVGFFSSTGYLRQRLTGDNNQQEGYVRYDTVFTAMHEESATQWRLGDVVSDAL
+ SWSSSVRVGGISWGRDFSLRPDLVTWPLPTFSGEAVVPTAADLFINGYQAGSTQIQPG
+ PFTLTNLPYINGAGEAVLVTRDALGRQVSTTLPFYVASDLLKTGMTDGAVTFGSLRRN
+ YGLENFDYGPALGSATYRYGASDYITLESHGEGAKSLALAGAGALVRLGRFGVVNGAL
+ SESRMRGNPGEQRTWGYQYNTSAFSLATQHSRRTRGFGNLALYDQLPRVDDDNFPQAS
+ LSQRSDQYSLTFNMGTFGNVGAAWIGVRTFDAQKTELLNLSWSRNLWRSSSLYLAASR
+ DQQQGEWTLAMSLQIPLGARDSAALSMEKTPDAGQTQRINYNHAMPTDGGFGWNLAWA
+ RQSQRHNYQQATLGWRNNNVELQGGVYGESDAFTGWGEAQGAVVLMDNHFFTANKIND
+ AFALISTDGHADVPVNYENQPVGKTNAQGYLLIAGVSAYYPAHYSINTLNLPADTRLK
+ ETGRRIALRRQSGFLVEFPLEQSRAASVILYNEQGQPLPLASLVLRPQNASAVVGYDG
+ IVWLEDLESVTPLQAVTPDGTRCEATLTLAANPDHKLQTYGPLVCRSKAL"
+ misc_feature 994937..997081
+ /locus_tag="SARI_01025"
+ /note="P pilus assembly protein, porin PapC [Cell motility
+ and secretion / Intracellular trafficking and secretion];
+ Region: FimD; COG3188"
+ /db_xref="CDD:225729"
+ misc_feature <994937..995161
+ /locus_tag="SARI_01025"
+ /note="PapC N-terminal domain; Region: PapC_N; pfam13954"
+ /db_xref="CDD:222472"
+ misc_feature 995387..996823
+ /locus_tag="SARI_01025"
+ /note="Type VII secretion system (T7SS), usher protein;
+ Region: Usher; pfam00577"
+ /db_xref="CDD:216001"
+ misc_feature 996866..997045
+ /locus_tag="SARI_01025"
+ /note="PapC C-terminal domain; Region: PapC_C; pfam13953"
+ /db_xref="CDD:222471"
+ gene 997093..998058
+ /locus_tag="SARI_01026"
+ CDS 997093..998058
+ /locus_tag="SARI_01026"
+ /inference="protein motif:Gene3D:IPR000259"
+ /inference="protein motif:HMMPfam:IPR007893"
+ /inference="protein motif:superfamily:IPR008966"
+ /inference="similar to AA sequence:INSD:ABP61127.1"
+ /note="'COG: COG5430 Uncharacterized secreted protein;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570076.1"
+ /db_xref="GI:161502964"
+ /db_xref="InterPro:IPR000259"
+ /db_xref="InterPro:IPR007893"
+ /db_xref="InterPro:IPR008966"
+ /translation="MTARILWLLALLFFVPGVWAACSVATTSGAFGSVSSFMLNSSEQ
+ TTSANVLVQCDVVLGLLNNDTVTLTYTGASVSAGTRAALKRTDNTSITDTIPVRLCGQ
+ AGCANNSEIAINGSYTWNGSTLLSLLGSRRFTLPLWFRTTSGLNVSAGPYQVTFNFSV
+ YYNICQVGLLGICGTAQTGTAATTLQLTLTVANDCIAITAPDVNFGSAPLVKNFPVIS
+ QSVAVTCTKGSVYSVGINNGAYANGNSRNMASGSNRLNYEIYKGATNNRWGSSGSERW
+ ASEASSAISADGLLRTYNYNAKILTNQPTPPAGVYSDTVVVDITF"
+ misc_feature 997663..998043
+ /locus_tag="SARI_01026"
+ /note="Spore Coat Protein U domain; Region: SCPU;
+ pfam05229"
+ /db_xref="CDD:218513"
+ gene 998143..999804
+ /locus_tag="SARI_01027"
+ CDS 998143..999804
+ /locus_tag="SARI_01027"
+ /inference="protein motif:FPrintScan:IPR004090"
+ /inference="protein motif:HMMPfam:IPR003122"
+ /inference="protein motif:HMMPfam:IPR003660"
+ /inference="protein motif:HMMPfam:IPR004089"
+ /inference="protein motif:HMMSmart:IPR003122"
+ /inference="protein motif:HMMSmart:IPR003660"
+ /inference="protein motif:HMMSmart:IPR004089"
+ /inference="protein motif:ScanRegExp:IPR004091"
+ /inference="protein motif:superfamily:IPR010989"
+ /inference="similar to AA sequence:REFSEQ:YP_216913.1"
+ /note="'KEGG: vpa:VPA0675 6.8e-12 torS; sensor protein
+ TorS K07647;
+ COG: COG0840 Methyl-accepting chemotaxis protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570077.1"
+ /db_xref="GI:161502965"
+ /db_xref="InterPro:IPR003122"
+ /db_xref="InterPro:IPR003660"
+ /db_xref="InterPro:IPR004089"
+ /db_xref="InterPro:IPR004090"
+ /db_xref="InterPro:IPR004091"
+ /db_xref="InterPro:IPR010989"
+ /translation="MFNRIRVVTMLMMVLGVFALLQLVSGGLLFSSLQHNQQGFVISN
+ ELRQQQSELTSTWDLMLQTRINLSRSAARMMMGTSNQQSSAKTDLLQNAKTTLAQAAA
+ HYTTFKNMTPLPAMAEASASVDEKYQRYQAALTELIQFLDNGNMDAYFAQPTQGMQNA
+ LGEALGNYAQVSENLYRQTFDQSAHDYRFAQWQLGILAIVLVLILIVVWYGIRQALLN
+ PLARVIAHIREIASGDLTKTLTVSGRNEIGELAGTVDHMQRSLTDTVTQVREGSDAIY
+ SGTSEIAAGNTDLSSRTEQQASALEETAASMEQLTATVKQNADNARQASQLAQSASDT
+ ARHGGKVVDGVVNTMHEIADSSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGR
+ GFAVVAGEVRNLASRSAQAAKEIKSLIEDSVARVDTGSVLVESAGETMTDIVNAVTRV
+ TDIMGEIASASDEQSRGIDQVALAVSEMDRVTQQNASLVQESAAAAAALEEQASRLTM
+ AVSAFRLASRPLAANKHEPRPLVDVQPGNTPRPLAAGDDANWETF"
+ misc_feature 998143..999801
+ /locus_tag="SARI_01027"
+ /note="methyl-accepting chemotaxis protein II;
+ Provisional; Region: PRK15048"
+ /db_xref="CDD:185008"
+ misc_feature 998272..998652
+ /locus_tag="SARI_01027"
+ /note="ligand binding domain of Tar- and Tsr-related
+ chemoreceptors; Region: Tar_Tsr_LBD; cd00181"
+ /db_xref="CDD:206638"
+ misc_feature order(998272..998274,998281..998283,998311..998316,
+ 998323..998328,998332..998337,998344..998349,
+ 998356..998361,998365..998370,998587..998592,
+ 998596..998598,998602..998607,998614..998616)
+ /locus_tag="SARI_01027"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:206638"
+ misc_feature order(998332..998334,998347..998349,998359..998361,
+ 998587..998592,998596..998598,998602..998604)
+ /locus_tag="SARI_01027"
+ /note="ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:206638"
+ misc_feature 998788..998931
+ /locus_tag="SARI_01027"
+ /note="Histidine kinase, Adenylyl cyclase,
+ Methyl-accepting protein, and Phosphatase (HAMP) domain.
+ HAMP is a signaling domain which occurs in a wide variety
+ of signaling proteins, many of which are bacterial. The
+ HAMP domain consists of two alpha helices...; Region:
+ HAMP; cd06225"
+ /db_xref="CDD:100122"
+ misc_feature order(998788..998793,998800..998805,998809..998814,
+ 998821..998826,998830..998832,998878..998883,
+ 998887..998892,998899..998904,998908..998913,
+ 998920..998925)
+ /locus_tag="SARI_01027"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:100122"
+ misc_feature 999022..999597
+ /locus_tag="SARI_01027"
+ /note="Methyl-accepting chemotaxis protein (MCP),
+ signaling domain; Region: MCP_signal; cd11386"
+ /db_xref="CDD:206779"
+ misc_feature order(999046..999051,999058..999063,999070..999072,
+ 999079..999084,999088..999093,999100..999102,
+ 999109..999114,999121..999123,999130..999135,
+ 999142..999147,999154..999156,999163..999168,
+ 999172..999177,999187..999189,999193..999198,
+ 999205..999207,999214..999219,999226..999231,
+ 999238..999240,999247..999249,999256..999261,
+ 999268..999270,999280..999282,999289..999291,
+ 999310..999312,999322..999324,999331..999333,
+ 999340..999345,999352..999354,999361..999366,
+ 999373..999378,999382..999387,999394..999399,
+ 999436..999441,999448..999450,999457..999462,
+ 999469..999471,999478..999483,999487..999492,
+ 999499..999504,999511..999513,999520..999525,
+ 999532..999534,999541..999546,999550..999555,
+ 999562..999567,999571..999576,999583..999585,
+ 999592..999597)
+ /locus_tag="SARI_01027"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:206779"
+ misc_feature 999256..999357
+ /locus_tag="SARI_01027"
+ /note="putative CheW interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:206779"
+ gene 1000002..1000832
+ /locus_tag="SARI_01028"
+ CDS 1000002..1000832
+ /locus_tag="SARI_01028"
+ /inference="protein motif:HMMPfam:IPR000780"
+ /inference="protein motif:HMMSmart:IPR000780"
+ /inference="protein motif:superfamily:IPR000780"
+ /inference="similar to AA sequence:REFSEQ:YP_216912.1"
+ /note="methylates the MCP"
+ /codon_start=1
+ /transl_table=11
+ /product="chemotaxis methyltransferase CheR"
+ /protein_id="YP_001570078.1"
+ /db_xref="GI:161502966"
+ /db_xref="InterPro:IPR000780"
+ /translation="MLQMTQRLALSDAHFRRICQLIYQRAGIVLADHKRDMVYNRLVR
+ RLRTLGLDDFGRYLSMLEANQTSAEWQAFINALTTNLTAFFREAHHFPILAEHARRRH
+ GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWRVFASDIDTEVLEKARSGIYRLSE
+ LKTLSPHQLQRYFMRGTGPHDGLVRVRQELANYVEFSSLNLLEKQYNIPGPFDAIFCR
+ NVMIYFDKTTQQDILRRFVPLLKPDGLLFAGHSENFSNLVREFSLRGQTVYALSKDKA
+ "
+ misc_feature 1000002..1000826
+ /locus_tag="SARI_01028"
+ /note="chemotaxis methyltransferase CheR; Provisional;
+ Region: PRK10611"
+ /db_xref="CDD:236725"
+ misc_feature 1000032..1000196
+ /locus_tag="SARI_01028"
+ /note="CheR methyltransferase, all-alpha domain; Region:
+ CheR_N; pfam03705"
+ /db_xref="CDD:202731"
+ misc_feature 1000317..1000742
+ /locus_tag="SARI_01028"
+ /note="S-adenosylmethionine-dependent methyltransferases
+ (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
+ that use S-adenosyl-L-methionine (SAM or AdoMet) as a
+ substrate for methyltransfer, creating the product
+ S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
+ cd02440"
+ /db_xref="CDD:100107"
+ misc_feature order(1000329..1000349,1000425..1000430,1000596..1000604,
+ 1000653..1000655)
+ /locus_tag="SARI_01028"
+ /note="S-adenosylmethionine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:100107"
+ gene 1000829..1001878
+ /locus_tag="SARI_01029"
+ CDS 1000829..1001878
+ /locus_tag="SARI_01029"
+ /inference="protein motif:BlastProDom:IPR000673"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:Gene3D:IPR000673"
+ /inference="protein motif:HMMPfam:IPR000673"
+ /inference="protein motif:HMMPfam:IPR001789"
+ /inference="protein motif:HMMPIR:IPR008248"
+ /inference="protein motif:HMMSmart:IPR001789"
+ /inference="protein motif:superfamily:IPR011006"
+ /inference="similar to AA sequence:SwissProt:Q57N81"
+ /note="regulates chemotaxis by demethylation of
+ methyl-accepting chemotaxis proteins"
+ /codon_start=1
+ /transl_table=11
+ /product="chemotaxis-specific methylesterase"
+ /protein_id="YP_001570079.1"
+ /db_xref="GI:161502967"
+ /db_xref="InterPro:IPR000673"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR008248"
+ /db_xref="InterPro:IPR011006"
+ /translation="MSKIRVLSVDDSALMRQIMTEIINSHSDMEMVATAPDPLVARDL
+ IKKFNPDVLTLDVEMPRMDGLDFLEKLMRLRPMPVVMVSSLTGKGSEVTLRALELGAI
+ DFVTKPQLGIREGMLAYSEMIAEKVRTAARARIAAHKPMAAPATLKAGPLLSSEKLIA
+ IGASTGGTEAIRHVLQPLPLSSPAVIITQHMPPGFTHSFAERLNKLCQISVKEAEDGE
+ RVLPGHAYIAPGDKHMELARSGANYLIKVHDGPPVNRHRPSVDVLFHSVAKHAGRNAV
+ GVILTGMGNDGAAGMLAMYQAGAWTIAQNEASCVVFGMPREAINMGGVSEVVDLSQVS
+ QQMLAKISAGQAIRI"
+ misc_feature 1000829..1001863
+ /locus_tag="SARI_01029"
+ /note="chemotaxis-specific methylesterase; Provisional;
+ Region: PRK00742"
+ /db_xref="CDD:234828"
+ misc_feature 1000847..1001152
+ /locus_tag="SARI_01029"
+ /note="Signal receiver domain; originally thought to be
+ unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
+ recently identified in eukaroytes ETR1 Arabidopsis
+ thaliana; this domain receives the signal from the sensor
+ partner in a two-component systems; Region: REC; cd00156"
+ /db_xref="CDD:238088"
+ misc_feature order(1000856..1000861,1000994..1000996,1001018..1001020,
+ 1001075..1001077,1001138..1001140,1001147..1001152)
+ /locus_tag="SARI_01029"
+ /note="active site"
+ /db_xref="CDD:238088"
+ misc_feature 1000994..1000996
+ /locus_tag="SARI_01029"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238088"
+ misc_feature order(1001003..1001008,1001012..1001020)
+ /locus_tag="SARI_01029"
+ /note="intermolecular recognition site; other site"
+ /db_xref="CDD:238088"
+ misc_feature 1001147..1001152
+ /locus_tag="SARI_01029"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238088"
+ misc_feature 1001300..1001845
+ /locus_tag="SARI_01029"
+ /note="CheB methylesterase; Region: CheB_methylest;
+ pfam01339"
+ /db_xref="CDD:216442"
+ gene 1001896..1002285
+ /locus_tag="SARI_01030"
+ CDS 1001896..1002285
+ /locus_tag="SARI_01030"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:HMMPfam:IPR001789"
+ /inference="protein motif:HMMSmart:IPR001789"
+ /inference="protein motif:superfamily:IPR011006"
+ /inference="similar to AA sequence:INSD:AAO68634.1"
+ /note="'chemotaxis regulator that, when phosphorylated,
+ interacts with the flagellar motor causing the flagella to
+ spin clockwise which causes the cell to tumble'"
+ /codon_start=1
+ /transl_table=11
+ /product="chemotaxis regulatory protein CheY"
+ /protein_id="YP_001570080.1"
+ /db_xref="GI:161502968"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR011006"
+ /translation="MADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALN
+ KLQAGGFGFIISDWNMPNMDGLELLKTIRADSAMSALPVLMVTAEAKKENIIAAAQAG
+ ASGYVVKPFTAATLEEKLNKIFEKLGM"
+ misc_feature 1001896..1002282
+ /locus_tag="SARI_01030"
+ /note="chemotaxis regulatory protein CheY; Provisional;
+ Region: PRK10610"
+ /db_xref="CDD:170568"
+ misc_feature 1001920..1002267
+ /locus_tag="SARI_01030"
+ /note="Signal receiver domain; originally thought to be
+ unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
+ recently identified in eukaroytes ETR1 Arabidopsis
+ thaliana; this domain receives the signal from the sensor
+ partner in a two-component systems; Region: REC; cd00156"
+ /db_xref="CDD:238088"
+ misc_feature order(1001929..1001934,1002064..1002066,1002088..1002090,
+ 1002154..1002156,1002211..1002213,1002220..1002225)
+ /locus_tag="SARI_01030"
+ /note="active site"
+ /db_xref="CDD:238088"
+ misc_feature 1002064..1002066
+ /locus_tag="SARI_01030"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238088"
+ misc_feature order(1002073..1002078,1002082..1002090)
+ /locus_tag="SARI_01030"
+ /note="intermolecular recognition site; other site"
+ /db_xref="CDD:238088"
+ misc_feature 1002220..1002228
+ /locus_tag="SARI_01030"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238088"
+ gene 1002293..1002940
+ /locus_tag="SARI_01031"
+ CDS 1002293..1002940
+ /locus_tag="SARI_01031"
+ /inference="protein motif:HMMPfam:IPR007439"
+ /inference="protein motif:HMMPIR:IPR007439"
+ /inference="similar to AA sequence:SwissProt:P07800"
+ /note="cytosolic phosphatase which functions in the
+ chemotaxis signal transduction complex by controlling the
+ level of phosphorylated CheY through dephosphorylation"
+ /codon_start=1
+ /transl_table=11
+ /product="chemotaxis regulator CheZ"
+ /protein_id="YP_001570081.1"
+ /db_xref="GI:161502969"
+ /db_xref="InterPro:IPR007439"
+ /translation="MMMQPSIKPADEGSAGDIIARIGSLTRMLRDSLRELGLDQAIAE
+ AAEAIPDARDRLDYVVQMTAQAAERALNSVEASQPHQDAMEKEAKALTQRWDEWFENP
+ IELSDARELVTDTRQFLKDVPGHTSFTNAQLLDIMMAQDFQDLTGQVIKRMMDVIQEI
+ ERQLLMVLLENIPEQSTRPKRENESLLNGPQVDASKAGVVASQDQVDDLLDSLGF"
+ misc_feature 1002296..1002886
+ /locus_tag="SARI_01031"
+ /note="chemotaxis regulator CheZ; Provisional; Region:
+ PRK11166"
+ /db_xref="CDD:236868"
+ gene 1003134..1004285
+ /gene="flhB"
+ /locus_tag="SARI_01032"
+ CDS 1003134..1004285
+ /gene="flhB"
+ /locus_tag="SARI_01032"
+ /inference="protein motif:FPrintScan:IPR006135"
+ /inference="protein motif:HMMPfam:IPR006135"
+ /inference="protein motif:HMMTigr:IPR006136"
+ /inference="similar to AA sequence:INSD:AAL20830.1"
+ /note="membrane protein responsible for substrate
+ specificity switching from rod/hook-type export to
+ filament-type export"
+ /codon_start=1
+ /transl_table=11
+ /product="flagellar biosynthesis protein FlhB"
+ /protein_id="YP_001570082.1"
+ /db_xref="GI:161502970"
+ /db_xref="InterPro:IPR006135"
+ /db_xref="InterPro:IPR006136"
+ /translation="MAEESDDDKTEDPTPHRLEKAREEGQIPRSRELTSLLILLVGVC
+ IIWFGGESLARQLAGMLSAGLHFDHRMVNDPNLILGQIILLIKAAMMALLPLIAGVVL
+ VALISPVMLGGLIFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAVLKSTLVGCVT
+ GSYLWHNWPQMMRLMAESPITAMGNALNLVGLCALLVVLGVIPMVGFDVFFQIFSHLK
+ KLRMSRQDIRDEFKESEGDPHVKGKIRQMQRAAAQRRMMEDVPKADVIVTNPTHYSVA
+ LQYEENKMSAPKVVAKGAGLIALRIREIGAEHRVPTLEAPPLARALYRHAEIGQQIPG
+ QLYAAVAEVLAWVWQLKRWRLAGGQRPPQPENLPVPEALDFMNEKTTDG"
+ misc_feature 1003134..1004210
+ /gene="flhB"
+ /locus_tag="SARI_01032"
+ /note="flagellar biosynthesis protein FlhB; Reviewed;
+ Region: flhB; PRK05702"
+ /db_xref="CDD:235569"
+ misc_feature 1003953..1004186
+ /gene="flhB"
+ /locus_tag="SARI_01032"
+ /note="Uncharacterized homolog of the cytoplasmic domain
+ of flagellar protein FhlB [Function unknown]; Region:
+ COG2257"
+ /db_xref="CDD:225166"
+ gene 1004278..1006356
+ /gene="flhA"
+ /locus_tag="SARI_01033"
+ CDS 1004278..1006356
+ /gene="flhA"
+ /locus_tag="SARI_01033"
+ /inference="protein motif:HMMPfam:IPR001712"
+ /inference="protein motif:HMMTigr:IPR006301"
+ /inference="protein motif:ScanRegExp:IPR001712"
+ /note="membrane protein involved in the flagellar export
+ apparatus"
+ /codon_start=1
+ /transl_table=11
+ /product="flagellar biosynthesis protein FlhA"
+ /protein_id="YP_001570083.1"
+ /db_xref="GI:161502971"
+ /db_xref="InterPro:IPR001712"
+ /db_xref="InterPro:IPR006301"
+ /translation="MDNLVAMLRLPGNLKSTHWQILAGPILILLILSMMVLPLPAFIL
+ DLLFTFNIALSIMVLLVAMFTQRTLDFAAFPTILLFTTLLRLALNVASTRIILMEGHT
+ GAAAAGKVVEAFGHFLVGGNFAIGIVVFIILVIINFMVITKGAGRIAEVGARFVLDGM
+ PGKQMAIDADLNAGLIGEDEAKKRRAEVTQEADFYGSMDGASKFVRGDAIAGILIMVI
+ NVVGGLLVGVLQHGMSMSSAAESYTLLTIGDGLVAQIPALVISTAAGVIVTRVSTDQD
+ VGEQMVGQLFSNPRVMLLAAAVLGLLGMVPGMPNLVFLLFTAALLGLAWWLRGREQKA
+ PEEPQPVKMPENNSVVEATWNDVQLEDSLGMEVGYRLIPMVDFQQDGELLGRIRSIRK
+ KFAQDMGFLPPVVHIRDNMDLQPARYRILMKGVEIGSGDAYPGRWLAINPGTAAGTLP
+ GEKTVDPAFGLDAIWIESALKEQAQIQGFTVVEASTVVATHLNHLIGQFAAELFGRQE
+ AQQLLDRVSQEMPKLTEDLVPGVVTLTTLHKVLQNLLAEKVPIRDMRTILETLAEHAP
+ LQSDPHELTAVVRVALGRAITQQWFPGNEEVQVIGLDTALERLLLQALQGGGGLEPGL
+ ADRLLAQTQEALSRQEMLGAPPVLLVNHALRPLLSRFLRRSLPQLVVLSNLELSDNRH
+ IRMTATIGGK"
+ misc_feature 1004281..1006350
+ /gene="flhA"
+ /locus_tag="SARI_01033"
+ /note="flagellar biosynthesis protein FlhA; Validated;
+ Region: flhA; PRK06012"
+ /db_xref="CDD:235672"
+ misc_feature 1004398..1006326
+ /gene="flhA"
+ /locus_tag="SARI_01033"
+ /note="FHIPEP family; Region: FHIPEP; pfam00771"
+ /db_xref="CDD:216110"
+ gene 1006356..1006748
+ /locus_tag="SARI_01034"
+ CDS 1006356..1006748
+ /locus_tag="SARI_01034"
+ /inference="protein motif:HMMPfam:IPR009420"
+ /inference="similar to AA sequence:INSD:AAX65825.1"
+ /note="'COG: NOG12148 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570084.1"
+ /db_xref="GI:161502972"
+ /db_xref="InterPro:IPR009420"
+ /translation="MYKWLALLLFPLTVQAAGEGAWQDSGMGVTLHYRGVSASSSPLS
+ ARQPVSGLMTLVAWRYELNGPTPAGLRVRLCSQSRCVELDGQSGTTHGFANVPAVEPL
+ RFVWEVPGGGRLIPALKVQSNQVIVNYR"
+ misc_feature 1006437..1006745
+ /locus_tag="SARI_01034"
+ /note="Flagellar protein FlhE; Region: FlhE; pfam06366"
+ /db_xref="CDD:191502"
+ gene complement(1006745..1006906)
+ /locus_tag="SARI_01035"
+ CDS complement(1006745..1006906)
+ /locus_tag="SARI_01035"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570085.1"
+ /db_xref="GI:161502973"
+ /translation="MYLPDPKEKWQKHKESANARHRFIKHRFYLLKRQSQKCGPGSNF
+ LLPGEKMRD"
+ gene 1006965..1008587
+ /locus_tag="SARI_01036"
+ CDS 1006965..1008587
+ /locus_tag="SARI_01036"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="similar to AA sequence:INSD:ABP61113.1"
+ /note="'KEGG: eci:UTI89_C4210 6.6e-17 yicJ; hypothetical
+ symporter YicJ K03292;
+ COG: COG2211 Na+/melibiose symporter and related
+ transporters;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570086.1"
+ /db_xref="GI:161502974"
+ /db_xref="InterPro:IPR011701"
+ /translation="MPGVSPLFAGLAAMKTRKIGLINYFAYGSGDFLGAGTTALTAAW
+ LLYFYTTFCNLTPIEATCIFATARVLDAVVSPLMGFLTDNFGSTWLGKRFGRRKFFIL
+ LGIPCVFSYSLIWLSGMGFWYYLLTYLLFDVVYTMILVPYETLVPEMTDDFKQKTRFS
+ GARISMAQMSAILASFLPGVLLAAFGKNNPVSFFYASLVFAVLCALMLVFVWCFTWER
+ PREAWTEAALRAEDEKKSLTFTQSVRRLVVELMSTLRIRIFRQHLGMYLGGYIAQDVF
+ NAVFTWYVVFVLMQDASVASNLLGTMATFQFIAVIAMIPLCIRFGPAPSYRIVVVLFG
+ LSSLSYALVYYTGLSDAYGLLLLVSACAGLGRGGINYVPWNTYTYIADVDEVITGQRR
+ EGIFAGIMTLTRKASQAGAVMVVGIVMQLSGFVSGQSMQAAAVSHTILLILSCGTLVM
+ LAFGFLVSLSFRLNLHTHRVLREETAKMRESGCTTPENITPQARAVVEMLSGLPYESL
+ WGNNNIGYLNRNKPAASGATLSAALNSTLNRG"
+ misc_feature 1007004..1008425
+ /locus_tag="SARI_01036"
+ /note="Na+/melibiose symporter and related transporters
+ [Carbohydrate transport and metabolism]; Region: MelB;
+ COG2211"
+ /db_xref="CDD:225121"
+ misc_feature 1007151..1008356
+ /locus_tag="SARI_01036"
+ /note="melibiose:sodium symporter; Provisional; Region:
+ PRK10429; cl15392"
+ /db_xref="CDD:199528"
+ gene 1008592..1009731
+ /locus_tag="SARI_01037"
+ CDS 1008592..1009731
+ /locus_tag="SARI_01037"
+ /inference="protein motif:HMMPfam:IPR010905"
+ /inference="protein motif:superfamily:IPR008928"
+ /inference="similar to AA sequence:INSD:AAL20827.1"
+ /note="'COG: COG4225 Predicted unsaturated glucuronyl
+ hydrolase involved in regulation of bacterial surface
+ properties, and related proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570087.1"
+ /db_xref="GI:161502975"
+ /db_xref="InterPro:IPR008928"
+ /db_xref="InterPro:IPR010905"
+ /translation="MIVYPVKHSPLLRQPERFIARDELKALIQKVTYNLVNIKDDTGE
+ FLLRLDDGRVIDTKGWAGWEWTHGVGLYGMYHYYQQTGDQTMCNIIDNWFADRFAEGA
+ TTKNVNTMAPFLTLAYRYEETGNPAWLPWLESWAEWAMYDMPRTDHGGMQHITLAEEN
+ HQQMWDDTLMMTVLPLAKIGKLLNRPEYVEEATYQFLLHVQNLIDRETGLWFHGWSYD
+ GHHNFANARWARGNSWLTIVIPDFLELLDLPENNAVRRYLVQVLNAQIAALAKCQDES
+ GLWHTLLDDPHAYLEASATAGFAYGILKAVRKRYVDRRYALVAEKAVQGIVRHISPEG
+ ELLQTSFGTGMGHDLDFYRNIPLTSMPYGQAMAMLCLTEYLRNYF"
+ misc_feature 1008676..1009728
+ /locus_tag="SARI_01037"
+ /note="Predicted unsaturated glucuronyl hydrolase involved
+ in regulation of bacterial surface properties, and related
+ proteins [General function prediction only]; Region:
+ COG4225"
+ /db_xref="CDD:226678"
+ gene complement(1009785..1011656)
+ /locus_tag="SARI_01038"
+ CDS complement(1009785..1011656)
+ /locus_tag="SARI_01038"
+ /inference="protein motif:HMMPfam:IPR001460"
+ /inference="protein motif:HMMPfam:IPR005311"
+ /inference="protein motif:superfamily:IPR005311"
+ /inference="protein motif:superfamily:IPR012338"
+ /note="'KEGG: eci:UTI89_C0637 4.9e-194 mrdA; cell
+ elongation, e phase; peptidoglycan synthetase;
+ penicillin-binding protein 2 K05515;
+ COG: COG0768 Cell division protein FtsI/penicillin-binding
+ protein 2;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570088.1"
+ /db_xref="GI:161502976"
+ /db_xref="InterPro:IPR001460"
+ /db_xref="InterPro:IPR005311"
+ /db_xref="InterPro:IPR012338"
+ /translation="MTFKDFDAEEKLFLRRVIVAFGVVIVCFGILIFNLYNLQIRQHH
+ YYTTRSNENDIKMLPVAPTRGIIYDRNGIPLVRNVTWYDIAVTPYKIADMDALLKQLT
+ PIVDLSPNDIADFRHALKSSSRYRPVVLKNALTDVEIARFAVNQFHFNGVTINSYQDR
+ QYPYGAELAHVLGYVSKINDNDLKALDKKGLAENYAADHNIGKQGIERYYENDLHGKT
+ GYQEVEVDNHGRIVRLLKDVPPIAGKNIHLTLDLHLQEYIESLLAGQRAAVLVEDPHD
+ GSVLAMVSMPSYDPNPFVKGISYQDYGKLLHDKNLPLINRVTQGLYPPASTVKPYMAM
+ SALLSGIITPQTTFFGAPTWTLPGTQRHYRDWKKTGHGMLDVTKAIEESADTFFYQVA
+ YMMGIDRIDTMLSQFGYGKPTGIDLNEEYDGLLPSRAWKQRVHKKAWYQGDTISVGIG
+ QGYWIATPIQMVKAMVALINNGKVIAPHLLLNEESGKTVVPYRPSGTASQIADPASPY
+ WGLVRQAMYGMANAPNGTGYKFFHTAPYGIAAKSGTSQVFSLKENQTYNAKMIPIRLR
+ DHVFYTAFAPYKNPKVAIALILENGGSDGVTAAPVMRKILDHLFDPQADTTQPGQAP"
+ misc_feature complement(1009788..1011650)
+ /locus_tag="SARI_01038"
+ /note="penicillin-binding protein 2; Provisional; Region:
+ PRK10795"
+ /db_xref="CDD:236761"
+ misc_feature complement(1010952..1011479)
+ /locus_tag="SARI_01038"
+ /note="Penicillin-binding Protein dimerisation domain;
+ Region: PBP_dimer; pfam03717"
+ /db_xref="CDD:217689"
+ misc_feature complement(1009836..1010858)
+ /locus_tag="SARI_01038"
+ /note="Penicillin binding protein transpeptidase domain;
+ Region: Transpeptidase; pfam00905"
+ /db_xref="CDD:216183"
+ gene complement(1011845..1013578)
+ /gene="argS"
+ /locus_tag="SARI_01039"
+ CDS complement(1011845..1013578)
+ /gene="argS"
+ /locus_tag="SARI_01039"
+ /inference="protein motif:HMMPanther:IPR001278"
+ /inference="protein motif:HMMPfam:IPR001278"
+ /inference="protein motif:HMMPfam:IPR005148"
+ /inference="protein motif:HMMPfam:IPR008909"
+ /inference="protein motif:HMMTigr:IPR001278"
+ /inference="protein motif:ScanRegExp:IPR001412"
+ /inference="protein motif:superfamily:IPR009080"
+ /note="'catalyzes a two-step reaction, first charging an
+ arginine molecule by linking its carboxyl group to the
+ alpha-phosphate of ATP, followed by transfer of the
+ aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA
+ synthetase'"
+ /codon_start=1
+ /transl_table=11
+ /product="arginyl-tRNA synthetase"
+ /protein_id="YP_001570089.1"
+ /db_xref="GI:161502977"
+ /db_xref="InterPro:IPR001278"
+ /db_xref="InterPro:IPR001412"
+ /db_xref="InterPro:IPR005148"
+ /db_xref="InterPro:IPR008909"
+ /db_xref="InterPro:IPR009080"
+ /translation="MNIQALLSEKVSQAMIAAGAPADCEPQVRQSAKVQFGDYQANGM
+ MAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLDPAFLAEQVQQALAS
+ DRLGVSQPARQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVG
+ DWGTQFGMLIAWLEKQQQENAGEMALADLEGFYRDAKKHYDEDEGFAERARNYVVKLQ
+ SGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKG
+ LAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVL
+ YYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLGKDGKPFKTRAGGTVKLAD
+ LLDEALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML
+ AFEGNTAPYMQYAYTRVLSVFRKADIDEQALASAPVIISEDREAQLAARLLQFEETLT
+ VVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDAVRNSRLKLAQLTAKTLKLGL
+ DTLGIETVERM"
+ misc_feature complement(1013318..1013578)
+ /gene="argS"
+ /locus_tag="SARI_01039"
+ /note="Arginyl tRNA synthetase N terminal dom; Region:
+ Arg_tRNA_synt_N; smart01016"
+ /db_xref="CDD:214975"
+ misc_feature complement(1011848..1013572)
+ /gene="argS"
+ /locus_tag="SARI_01039"
+ /note="arginyl-tRNA synthetase; Region: argS; TIGR00456"
+ /db_xref="CDD:232981"
+ misc_feature complement(1012424..1013239)
+ /gene="argS"
+ /locus_tag="SARI_01039"
+ /note="catalytic core domain of arginyl-tRNA synthetases;
+ Region: ArgRS_core; cd00671"
+ /db_xref="CDD:185675"
+ misc_feature complement(order(1012547..1012549,1012556..1012558,
+ 1012628..1012630,1012640..1012642,1013183..1013185,
+ 1013192..1013194,1013210..1013212,1013216..1013218,
+ 1013225..1013227))
+ /gene="argS"
+ /locus_tag="SARI_01039"
+ /note="active site"
+ /db_xref="CDD:185675"
+ misc_feature complement(1013183..1013194)
+ /gene="argS"
+ /locus_tag="SARI_01039"
+ /note="HIGH motif; other site"
+ /db_xref="CDD:185675"
+ misc_feature complement(1012430..1012441)
+ /gene="argS"
+ /locus_tag="SARI_01039"
+ /note="KMSK motif region; other site"
+ /db_xref="CDD:185675"
+ misc_feature complement(1011848..1012312)
+ /gene="argS"
+ /locus_tag="SARI_01039"
+ /note="Anticodon-binding domain of arginyl tRNA
+ synthetases; Region: Anticodon_Ia_Arg; cd07956"
+ /db_xref="CDD:153410"
+ misc_feature complement(order(1011914..1011916,1011977..1011979,
+ 1011983..1011985,1011995..1011997,1012016..1012018,
+ 1012043..1012045,1012160..1012162,1012169..1012174,
+ 1012181..1012186,1012193..1012195,1012202..1012204,
+ 1012214..1012225))
+ /gene="argS"
+ /locus_tag="SARI_01039"
+ /note="tRNA binding surface [nucleotide binding]; other
+ site"
+ /db_xref="CDD:153410"
+ misc_feature complement(order(1011848..1011853,1011914..1011916,
+ 1011959..1011970,1011977..1011979,1012160..1012162,
+ 1012169..1012174,1012181..1012186,1012193..1012195))
+ /gene="argS"
+ /locus_tag="SARI_01039"
+ /note="anticodon binding site; other site"
+ /db_xref="CDD:153410"
+ gene 1013815..1014384
+ /locus_tag="SARI_01040"
+ CDS 1013815..1014384
+ /locus_tag="SARI_01040"
+ /inference="protein motif:HMMPfam:IPR010393"
+ /inference="protein motif:ScanRegExp:IPR002097"
+ /inference="similar to AA sequence:REFSEQ:YP_150248.1"
+ /note="'COG: COG3102 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570090.1"
+ /db_xref="GI:161502978"
+ /db_xref="InterPro:IPR002097"
+ /db_xref="InterPro:IPR010393"
+ /translation="MANWQNIDELHDISADLPRFTLALRELSTRLGLEISALEADHIS
+ LRCHQNTTAERWRRGFEQCGDLLSENIINGRPICLFKLHEPVYVEHWRFSVIELPWPG
+ EKRYPHEGWEHIEIVLPGEPETLNARALALLSDEGHSQPGIVVKTSAPQGEHERLPNP
+ TLAVTDGRVTVKFHPWSIEAIIASEQAAH"
+ misc_feature 1013929..1014342
+ /locus_tag="SARI_01040"
+ /note="This conserved domain belongs to a superfamily
+ including the bleomycin resistance protein, glyoxalase I,
+ and type I ring-cleaving dioxygenases; Region:
+ Glo_EDI_BRP_like_4; cd07268"
+ /db_xref="CDD:176689"
+ misc_feature order(1013938..1013940,1014151..1014153,1014328..1014330)
+ /locus_tag="SARI_01040"
+ /note="putative metal binding site [ion binding]; other
+ site"
+ /db_xref="CDD:176689"
+ gene 1014386..1015150
+ /locus_tag="SARI_01041"
+ CDS 1014386..1015150
+ /locus_tag="SARI_01041"
+ /inference="protein motif:HMMPanther:IPR005627"
+ /inference="protein motif:HMMPfam:IPR005627"
+ /inference="similar to AA sequence:INSD:AAL20823.1"
+ /note="'COG: COG3142 Uncharacterized protein involved in
+ copper resistance;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="copper homeostasis protein CutC"
+ /protein_id="YP_001570091.1"
+ /db_xref="GI:161502979"
+ /db_xref="InterPro:IPR005627"
+ /translation="MPTGVNMALLEICCYSMECALTAQQNGADRIELCAAPKEGGLTP
+ SLGVLRSVREHIMIPVHPIIRPRGGDFYYTDGEFTAMLEDIRLVRELGFPGLVTGVLT
+ LDGDVDMPRMEKIMAAAGPLAVTFHRAFDMCANPFNALKNLADAGVARVLTSGQKADA
+ AQGLSIIMELIAQGDAPIIMAGAGVRADNLQNFLNAGVREVHSSAGVLLASPMRYRNQ
+ GLSMSADVQADEYSRYRVEGAAVAEMKGVIVHHQTK"
+ misc_feature 1014404..1015147
+ /locus_tag="SARI_01041"
+ /note="copper homeostasis protein CutC; Provisional;
+ Region: PRK11572"
+ /db_xref="CDD:183208"
+ gene complement(1015384..1016355)
+ /locus_tag="SARI_01042"
+ CDS complement(1015384..1016355)
+ /locus_tag="SARI_01042"
+ /inference="protein motif:HMMPfam:IPR010017"
+ /inference="protein motif:HMMTigr:IPR010017"
+ /inference="similar to AA sequence:INSD:CAD05657.1"
+ /note="'KEGG: eci:UTI89_C2075 3.3e-165 yecP; hypothetical
+ protein K00599;
+ COG: COG0500 SAM-dependent methyltransferases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570092.1"
+ /db_xref="GI:161502980"
+ /db_xref="InterPro:IPR010017"
+ /translation="MIEFGNFYQLIAKNHLSHWLEILPAQIAAWQREQQHGLFKQWSN
+ AVEFLPEITPWRLDLLHSVTAESEAPLSEGQLKRIDTLLRNLMPWRKGPFSLYGVNID
+ TEWRSDWKWERVLPHLSDLTGRTILDVGCGSGYHLWRMIGAGAHLAVGIDPTQLFLCQ
+ FEAVRKLLGNDQRAHLLPLGIEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVN
+ EGELVLETLVVDGDENTVLVPGDRYAQMRNVYFIPSAPALKKWLEKCGLIDVRIADVC
+ VTTTEEQRRTEWMVTESLADFLDPNDHSKTVEGYPAPLRAVLIARKP"
+ misc_feature complement(1015546..1016022)
+ /locus_tag="SARI_01042"
+ /note="Methyltransferase domain; Region: Methyltransf_23;
+ pfam13489"
+ /db_xref="CDD:222171"
+ misc_feature complement(1015669..1015983)
+ /locus_tag="SARI_01042"
+ /note="S-adenosylmethionine-dependent methyltransferases
+ (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
+ that use S-adenosyl-L-methionine (SAM or AdoMet) as a
+ substrate for methyltransfer, creating the product
+ S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
+ cd02440"
+ /db_xref="CDD:100107"
+ misc_feature complement(order(1015768..1015770,1015813..1015821,
+ 1015897..1015902,1015951..1015971))
+ /locus_tag="SARI_01042"
+ /note="S-adenosylmethionine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:100107"
+ gene complement(1016352..1017095)
+ /locus_tag="SARI_01043"
+ CDS complement(1016352..1017095)
+ /locus_tag="SARI_01043"
+ /inference="protein motif:HMMPfam:IPR013217"
+ /inference="protein motif:HMMTigr:IPR005271"
+ /inference="similar to AA sequence:INSD:AAV76939.1"
+ /note="'KEGG: eci:UTI89_C2074 8.0e-123 yecO; hypothetical
+ protein K00559;
+ COG: COG0500 SAM-dependent methyltransferases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570093.1"
+ /db_xref="GI:161502981"
+ /db_xref="InterPro:IPR005271"
+ /db_xref="InterPro:IPR013217"
+ /translation="MSHRDTLFSAPIARLGDWTFDERVAEVFPDMIQRSVPGYSNIIS
+ MIGMLAERFVQPDTQVYDLGCSLGAATLSVRRNIRHEHCRIIAVDNSPAMIERCRRHI
+ DAYKAPTPVEVVEGDIRDITIENASMVVLNFTLQFLEPAERQALLDKIYLGLNPGGAL
+ VLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARL
+ RKAGFEHSELWFQCFNFGSLVALKAGVAA"
+ misc_feature complement(1016607..1016918)
+ /locus_tag="SARI_01043"
+ /note="S-adenosylmethionine-dependent methyltransferases
+ (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
+ that use S-adenosyl-L-methionine (SAM or AdoMet) as a
+ substrate for methyltransfer, creating the product
+ S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
+ cd02440"
+ /db_xref="CDD:100107"
+ misc_feature complement(order(1016700..1016702,1016742..1016750,
+ 1016826..1016831,1016889..1016909))
+ /locus_tag="SARI_01043"
+ /note="S-adenosylmethionine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:100107"
+ gene complement(1017136..1017531)
+ /locus_tag="SARI_01044"
+ CDS complement(1017136..1017531)
+ /locus_tag="SARI_01044"
+ /inference="similar to AA sequence:INSD:AAO68645.1"
+ /note="'KEGG: hsa:4056 3.4e-05 LTC4S; leukotriene C4
+ synthase K00807;
+ COG: COG3788 Uncharacterized relative of glutaTHIone
+ S-transferase, MAPEG superfamily;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570094.1"
+ /db_xref="GI:161502982"
+ /translation="MVSALYAVLGALLLMKFSFNVVRLRMQYRVAYGDGGFSELQSAI
+ RIHGNAVEYIPVALVLLLFMEMNGAETWMVHICGIILIAGRLMHYYGFHHRLFRWRRA
+ GMSATWCALLLMVLANLWYMPWELVFSLY"
+ misc_feature complement(1017151..1017531)
+ /locus_tag="SARI_01044"
+ /note="Uncharacterized relative of glutathione
+ S-transferase, MAPEG superfamily [General function
+ prediction only]; Region: COG3788"
+ /db_xref="CDD:226311"
+ gene complement(1017583..1018401)
+ /locus_tag="SARI_01045"
+ CDS complement(1017583..1018401)
+ /locus_tag="SARI_01045"
+ /inference="protein motif:BlastProDom:IPR002763"
+ /inference="protein motif:HMMPfam:IPR002763"
+ /inference="similar to AA sequence:INSD:AAL20819.1"
+ /note="'COG: COG1801 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570095.1"
+ /db_xref="GI:161502983"
+ /db_xref="InterPro:IPR002763"
+ /translation="MIYIGLPQWSHPKWARLGITSLEEYARHFNCVEGNTTLYALPKT
+ EIVDRWYAQTTDDFRFCFKFPATISHQSALRHCDALVQEFFTRLAPLETRIGQYWLQL
+ PAVFGPRDLPALWQFLDALPATFTYGVEVRHPLFFDKGEDEQRLNRGLHERGVNRVIL
+ DSRPVHAAYPHSESVREAQRKKPKVPVHAVVTARHPMVRFIGSDNMAQNREFFAAWLQ
+ KLPQWRQTTTPFLFLHTPDIAQAPELVNTLWHDLRNVLPEIGAAPSIPQQSSLF"
+ misc_feature complement(1017586..1018401)
+ /locus_tag="SARI_01045"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10302"
+ /db_xref="CDD:182366"
+ gene complement(1018398..1018964)
+ /locus_tag="SARI_01046"
+ CDS complement(1018398..1018964)
+ /locus_tag="SARI_01046"
+ /inference="protein motif:Gene3D:IPR000868"
+ /inference="protein motif:HMMPfam:IPR000868"
+ /inference="protein motif:superfamily:IPR000868"
+ /inference="similar to AA sequence:REFSEQ:YP_150254.1"
+ /note="'KEGG: eci:UTI89_C2071 5.3e-78 yecD; hypothetical
+ protein;
+ COG: COG1335 Amidases related to nicotinamidase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570096.1"
+ /db_xref="GI:161502984"
+ /db_xref="InterPro:IPR000868"
+ /translation="MLKLNATTTALVVIDLQEGILPFAGGPYTANEVVARAARLAEKC
+ RANGSPVVMVRVGWSDDYAEALKQPVDAATPAHALPENWWTWPTALGKKNSDLEVTKR
+ QWGAFYGTDLELQLRRRGIDTIILCGISTNIGVESTARNAWELGFSLIIAEDACSAAS
+ SEQHQSSMTHIFPRIGRVRSVEDILNAL"
+ misc_feature complement(1018416..1018940)
+ /locus_tag="SARI_01046"
+ /note="Isochorismatase family; Region: Isochorismatase;
+ pfam00857"
+ /db_xref="CDD:216156"
+ misc_feature complement(1018449..1018937)
+ /locus_tag="SARI_01046"
+ /note="Cysteine hydrolases; This family contains
+ amidohydrolases, like CSHase (N-carbamoylsarcosine
+ amidohydrolase), involved in creatine metabolism and
+ nicotinamidase, converting nicotinamide to nicotinic acid
+ and ammonia in the pyridine nucleotide cycle. It...;
+ Region: cysteine_hydrolases; cd00431"
+ /db_xref="CDD:238245"
+ misc_feature complement(order(1018563..1018565,1018662..1018664,
+ 1018920..1018922))
+ /locus_tag="SARI_01046"
+ /note="catalytic triad [active]"
+ /db_xref="CDD:238245"
+ misc_feature complement(1018575..1018580)
+ /locus_tag="SARI_01046"
+ /note="conserved cis-peptide bond; other site"
+ /db_xref="CDD:238245"
+ gene 1019289..1021061
+ /gene="aspS"
+ /locus_tag="SARI_01047"
+ CDS 1019289..1021061
+ /gene="aspS"
+ /locus_tag="SARI_01047"
+ /inference="protein motif:Gene3D:IPR012340"
+ /inference="protein motif:HMMPfam:IPR004115"
+ /inference="protein motif:HMMPfam:IPR004364"
+ /inference="protein motif:HMMPfam:IPR004365"
+ /inference="protein motif:HMMTigr:IPR004524"
+ /inference="protein motif:superfamily:IPR008994"
+ /note="'catalyzes a two-step reaction, first charging an
+ aspartate molecule by linking its carboxyl group to the
+ alpha-phosphate of ATP, followed by transfer of the
+ aminoacyl-adenylate to its tRNA; contains discriminating
+ and non-discriminating subtypes'"
+ /codon_start=1
+ /transl_table=11
+ /product="aspartyl-tRNA synthetase"
+ /protein_id="YP_001570097.1"
+ /db_xref="GI:161502985"
+ /db_xref="InterPro:IPR004115"
+ /db_xref="InterPro:IPR004364"
+ /db_xref="InterPro:IPR004365"
+ /db_xref="InterPro:IPR004524"
+ /db_xref="InterPro:IPR008994"
+ /db_xref="InterPro:IPR012340"
+ /translation="MRTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGI
+ VQVFFDPDRADALKLASELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTII
+ NRADSLPLDANHINTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDI
+ ETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRD
+ EDLRADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKDVDLGDFPVMTFAEAE
+ RRYGSDKPDLRNPMELVDVADLLKSVEFAVFAGPANDPKGRVAALRVPGGAQLSRKQI
+ DDYGNFVKIYGAKGLAYIKVNDRAKGLDGITSPVAKFLSTEIVEAILARTGAQNGDMI
+ FFGADNKKVVADALGALRLKLGKDLSLTDEDKWAPLWVIDFPMFEDDGEGGLTAMHHP
+ FTAPRDMTASELKAAPENAVANAYDMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQ
+ EQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTE
+ APSFANQAALTELGIQVVKKAENN"
+ misc_feature 1019289..1021049
+ /gene="aspS"
+ /locus_tag="SARI_01047"
+ /note="aspartyl-tRNA synthetase; Validated; Region: aspS;
+ PRK00476"
+ /db_xref="CDD:234775"
+ misc_feature 1019292..1019690
+ /gene="aspS"
+ /locus_tag="SARI_01047"
+ /note="EcAspRS_like_N: N-terminal, anticodon recognition
+ domain of the type found in Escherichia coli aspartyl-tRNA
+ synthetase (AspRS), the human mitochondrial (mt) AspRS-2,
+ the discriminating (D) Thermus thermophilus AspRS-1, and
+ the nondiscriminating (ND)...; Region: EcAspRS_like_N;
+ cd04317"
+ /db_xref="CDD:239812"
+ misc_feature order(1019292..1019294,1019301..1019303,1019355..1019357,
+ 1019409..1019411,1019595..1019597,1019601..1019606)
+ /gene="aspS"
+ /locus_tag="SARI_01047"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:239812"
+ misc_feature order(1019364..1019366,1019370..1019378,1019391..1019393,
+ 1019424..1019426,1019478..1019480,1019520..1019522,
+ 1019538..1019540,1019565..1019567,1019613..1019615)
+ /gene="aspS"
+ /locus_tag="SARI_01047"
+ /note="anticodon binding site; other site"
+ /db_xref="CDD:239812"
+ misc_feature 1019700..>1020128
+ /gene="aspS"
+ /locus_tag="SARI_01047"
+ /note="Asp tRNA synthetase (aspRS) class II core domain.
+ Class II assignment is based upon its structure and the
+ presence of three characteristic sequence motifs. AspRS is
+ a homodimer, which attaches a specific amino acid to the
+ 3' OH group of ribose of...; Region: AspRS_core;
+ cd00777"
+ /db_xref="CDD:238400"
+ misc_feature order(1019709..1019717,1019724..1019726,1019733..1019738,
+ 1019745..1019747,1019754..1019765,1019769..1019789,
+ 1019808..1019810,1019817..1019831,1019841..1019852,
+ 1019895..1019900,1019907..1019912,1019928..1019930,
+ 1019940..1019942,1019970..1019972,1020000..1020002,
+ 1020015..1020017)
+ /gene="aspS"
+ /locus_tag="SARI_01047"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238400"
+ misc_feature 1019775..1019789
+ /gene="aspS"
+ /locus_tag="SARI_01047"
+ /note="motif 1; other site"
+ /db_xref="CDD:238400"
+ misc_feature order(1019799..1019807,1019865..1019867,1019871..1019873,
+ 1019880..1019882,1019937..1019939,1019943..1019945,
+ 1019958..1019966,1019973..1019975,1019979..1019981)
+ /gene="aspS"
+ /locus_tag="SARI_01047"
+ /note="active site"
+ /db_xref="CDD:238400"
+ misc_feature 1019934..1019945
+ /gene="aspS"
+ /locus_tag="SARI_01047"
+ /note="motif 2; other site"
+ /db_xref="CDD:238400"
+ misc_feature 1020207..1020506
+ /gene="aspS"
+ /locus_tag="SARI_01047"
+ /note="GAD domain; Region: GAD; pfam02938"
+ /db_xref="CDD:145868"
+ misc_feature <1020561..1020962
+ /gene="aspS"
+ /locus_tag="SARI_01047"
+ /note="Class II tRNA amino-acyl synthetase-like catalytic
+ core domain. Class II amino acyl-tRNA synthetases (aaRS)
+ share a common fold and generally attach an amino acid to
+ the 3' OH of ribose of the appropriate tRNA. PheRS
+ is an exception in that it...; Region:
+ class_II_aaRS-like_core; cl00268"
+ /db_xref="CDD:241739"
+ misc_feature order(1020732..1020737,1020747..1020749,1020876..1020881,
+ 1020885..1020890,1020897..1020899)
+ /gene="aspS"
+ /locus_tag="SARI_01047"
+ /note="active site"
+ /db_xref="CDD:238391"
+ misc_feature order(1020888..1020890,1020897..1020899)
+ /gene="aspS"
+ /locus_tag="SARI_01047"
+ /note="motif 3; other site"
+ /db_xref="CDD:238391"
+ gene 1021127..1021615
+ /gene="ntpA"
+ /locus_tag="SARI_01048"
+ CDS 1021127..1021615
+ /gene="ntpA"
+ /locus_tag="SARI_01048"
+ /inference="protein motif:FPrintScan:IPR000086"
+ /inference="protein motif:FPrintScan:IPR003564"
+ /inference="protein motif:Gene3D:IPR000086"
+ /inference="protein motif:HMMPfam:IPR000086"
+ /inference="protein motif:ScanRegExp:IPR000086"
+ /inference="protein motif:superfamily:IPR000086"
+ /inference="similar to AA sequence:INSD:AAX65814.1"
+ /note="converts dATP to dAMP and pyrophosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="dATP pyrophosphohydrolase"
+ /protein_id="YP_001570098.1"
+ /db_xref="GI:161502986"
+ /db_xref="InterPro:IPR000086"
+ /db_xref="InterPro:IPR003564"
+ /translation="MEASLNSRQRGRVKDKVYKRPVSVLVVIFAKDTKRVLMLQRRDD
+ PDFWQSVTGSLEDGETALQAAVREVKEEVTIDVAAEQLTLIDCQRMVEFEIFSHLRHR
+ YAPGVMHNTESWFCLALPHERQVIFTEHLTYQWLDAAAAAALTKSWSNRQAIEEFVIN
+ VA"
+ misc_feature 1021187..1021591
+ /gene="ntpA"
+ /locus_tag="SARI_01048"
+ /note="Members of the Nudix hydrolase superfamily catalyze
+ the hydrolysis of NUcleoside DIphosphates linked to other
+ moieties, X. Enzymes belonging to this superfamily require
+ a divalent cation, such as Mg2+ or Mn2+, for their
+ activity and contain a highly...; Region:
+ Nudix_Hydrolase_7; cd04664"
+ /db_xref="CDD:240022"
+ misc_feature order(1021283..1021306,1021313..1021351)
+ /gene="ntpA"
+ /locus_tag="SARI_01048"
+ /note="nudix motif; other site"
+ /db_xref="CDD:240022"
+ gene 1021644..1022387
+ /locus_tag="SARI_01049"
+ CDS 1021644..1022387
+ /locus_tag="SARI_01049"
+ /inference="protein motif:BlastProDom:IPR002876"
+ /inference="protein motif:HMMPanther:IPR002876"
+ /inference="protein motif:HMMPfam:IPR002876"
+ /inference="protein motif:HMMTigr:IPR002876"
+ /inference="similar to AA sequence:INSD:CAA42126.1"
+ /note="'KEGG: eci:UTI89_C2068 2.2e-127 yebC; hypothetical
+ protein K00975;
+ COG: COG0217 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570099.1"
+ /db_xref="GI:161502987"
+ /db_xref="InterPro:IPR002876"
+ /translation="MAGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGGDPD
+ ANPRLRAAVDKALSNNMTRDTLNRAIARGVGGDDDANMETIIYEGYGPGGTAIMVECL
+ SDNRNRTVAEVRHAFSKCGGNLGTDGSVAYLFSKKGVISFEKGDEDTIMEAALEAGAE
+ DVVTYDDGAIDVYTAWEEMGKVRDALENAGLKADSAEVSMIPSTKADMDAETAPKLLR
+ LIDMLEDCDDVQEVYHNGEISDEVAATLE"
+ misc_feature 1021644..1022381
+ /locus_tag="SARI_01049"
+ /note="hypothetical protein; Validated; Region: PRK00110"
+ /db_xref="CDD:234640"
+ gene 1022422..1022943
+ /gene="ruvC"
+ /locus_tag="SARI_01050"
+ CDS 1022422..1022943
+ /gene="ruvC"
+ /locus_tag="SARI_01050"
+ /inference="protein motif:BlastProDom:IPR002176"
+ /inference="protein motif:FPrintScan:IPR002176"
+ /inference="protein motif:HMMPfam:IPR002176"
+ /inference="protein motif:HMMTigr:IPR002176"
+ /inference="protein motif:ScanRegExp:IPR002176"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:INSD:AAL20814.1"
+ /note="endonuclease; resolves Holliday structures; forms a
+ complex of RuvABC; the junction binding protein RuvA forms
+ a hexameric ring along with the RuvB helicase and
+ catalyzes branch migration; RuvC then interacts with RuvAB
+ to resolve the Holliday junction by nicking DNA strands of
+ like polarity"
+ /codon_start=1
+ /transl_table=11
+ /product="Holliday junction resolvase"
+ /protein_id="YP_001570100.1"
+ /db_xref="GI:161502988"
+ /db_xref="InterPro:IPR002176"
+ /db_xref="InterPro:IPR012337"
+ /translation="MAIILGIDPGSRITGYGVIRQVGRQLTYLGSGCIRTKVDDLPSR
+ LKLIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNRELPVFEY
+ AARQVKQTVVGIGSAEKSQVQHMVRTLLKLPANPQADAADALAIAITHCHVSQNAMQM
+ SESRLNLARGRLR"
+ misc_feature 1022428..1022814
+ /gene="ruvC"
+ /locus_tag="SARI_01050"
+ /note="Holliday junction resolvases (HJRs) are
+ endonucleases that specifically resolve Holliday junction
+ DNA intermediates during homologous recombination.
+ HJR's occur in archaea, bacteria, and in the
+ mitochondria of certain fungi, however this CD...; Region:
+ RuvC_resolvase; cd00529"
+ /db_xref="CDD:238294"
+ misc_feature order(1022443..1022445,1022620..1022622)
+ /gene="ruvC"
+ /locus_tag="SARI_01050"
+ /note="active site"
+ /db_xref="CDD:238294"
+ misc_feature order(1022455..1022457,1022524..1022526,1022638..1022640,
+ 1022659..1022661,1022734..1022736,1022743..1022745,
+ 1022776..1022778)
+ /gene="ruvC"
+ /locus_tag="SARI_01050"
+ /note="putative DNA-binding cleft [nucleotide binding];
+ other site"
+ /db_xref="CDD:238294"
+ misc_feature order(1022557..1022559,1022566..1022568,1022629..1022631,
+ 1022644..1022646,1022653..1022658,1022665..1022670,
+ 1022674..1022679,1022686..1022688,1022698..1022703)
+ /gene="ruvC"
+ /locus_tag="SARI_01050"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238294"
+ gene 1022950..1023636
+ /gene="ruvA"
+ /locus_tag="SARI_01051"
+ CDS 1022950..1023636
+ /gene="ruvA"
+ /locus_tag="SARI_01051"
+ /inference="protein motif:BlastProDom:IPR013850"
+ /inference="protein motif:Gene3D:IPR012340"
+ /inference="protein motif:HMMPfam:IPR000445"
+ /inference="protein motif:HMMPfam:IPR011114"
+ /inference="protein motif:HMMPfam:IPR013849"
+ /inference="protein motif:HMMTigr:IPR000085"
+ /inference="protein motif:superfamily:IPR008994"
+ /inference="protein motif:superfamily:IPR010994"
+ /inference="protein motif:superfamily:IPR011132"
+ /inference="similar to AA sequence:REFSEQ:NP_456462.1"
+ /note="plays an essential role in ATP-dependent branch
+ migration of the Holliday junction"
+ /codon_start=1
+ /transl_table=11
+ /product="Holliday junction DNA helicase RuvA"
+ /protein_id="YP_001570101.1"
+ /db_xref="GI:161502989"
+ /db_xref="InterPro:IPR000085"
+ /db_xref="InterPro:IPR000445"
+ /db_xref="InterPro:IPR008994"
+ /db_xref="InterPro:IPR010994"
+ /db_xref="InterPro:IPR011114"
+ /db_xref="InterPro:IPR011132"
+ /db_xref="InterPro:IPR012340"
+ /db_xref="InterPro:IPR013849"
+ /db_xref="InterPro:IPR013850"
+ /translation="MRLDIYPAFFYDTTLPFQPFTQERHVIGRLRGIILEKQPPIVLL
+ ETGGVGYEVHMPMTCFYELPESGKEAIIFTHFVVREDAQLLYGFNNKQERTLFKELIK
+ TNGVGPKLALAILSGMSAQQFVNAVEREDPAALVKLPGIGKKTAERLIVEMKDRFKGL
+ HGDLFTPAVDLVLMSPASPTSEDAEQEAVAALVALGYKPQEASRMVSKVAHSDASSET
+ LIRDALRAAL"
+ misc_feature 1023028..1023633
+ /gene="ruvA"
+ /locus_tag="SARI_01051"
+ /note="Holliday junction DNA helicase RuvA; Reviewed;
+ Region: ruvA; PRK00116"
+ /db_xref="CDD:234645"
+ misc_feature 1023028..1023210
+ /gene="ruvA"
+ /locus_tag="SARI_01051"
+ /note="RuvA N terminal domain; Region: RuvA_N; pfam01330"
+ /db_xref="CDD:216437"
+ misc_feature <1023535..1023627
+ /gene="ruvA"
+ /locus_tag="SARI_01051"
+ /note="RuvA, C-terminal domain; Region: RuvA_C; pfam07499"
+ /db_xref="CDD:219432"
+ gene 1023645..1024655
+ /gene="ruvB"
+ /locus_tag="SARI_01052"
+ CDS 1023645..1024655
+ /gene="ruvB"
+ /locus_tag="SARI_01052"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR003959"
+ /inference="protein motif:HMMPfam:IPR008823"
+ /inference="protein motif:HMMPfam:IPR008824"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR004605"
+ /inference="similar to AA sequence:SwissProt:Q57NA3"
+ /note="promotes strand exchange during homologous
+ recombination; RuvAB complex promotes branch migration;
+ RuvABC complex scans the DNA during branch migration and
+ resolves Holliday junctions at consensus sequences; forms
+ hexameric rings around opposite DNA arms; requires ATP for
+ branch migration and orientation of RuvAB complex
+ determines direction of migration"
+ /codon_start=1
+ /transl_table=11
+ /product="Holliday junction DNA helicase RuvB"
+ /protein_id="YP_001570102.1"
+ /db_xref="GI:161502990"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR003959"
+ /db_xref="InterPro:IPR004605"
+ /db_xref="InterPro:IPR008823"
+ /db_xref="InterPro:IPR008824"
+ /db_xref="InterPro:IPR011991"
+ /translation="MIEADRLISAGATIAEEVADRAIRPKLLAEYVGQPQVRSQMEIF
+ IQAAKLRGDALDHLLIFGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLT
+ NLEPHDVLFIDEIHRLSPVVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGA
+ TTRAGSLTSPLRDRFGIVQRLEFYQVPDLQHIVGRSARHMGLEMSDDGALEVARRARG
+ TPRIANRLLRRVRDFAEVKHDGAISAEIAAQALDMLNVDAEGFDYMDRKLLLAVIDKF
+ FGGPVGLDNLAAAIGEERETIEDVLEPYLIQQGFLQRTPRGRMATVRAWNHFGITPPE
+ MP"
+ misc_feature 1023660..1024640
+ /gene="ruvB"
+ /locus_tag="SARI_01052"
+ /note="Holliday junction DNA helicase RuvB; Reviewed;
+ Region: ruvB; PRK00080"
+ /db_xref="CDD:234619"
+ misc_feature 1023768..1024178
+ /gene="ruvB"
+ /locus_tag="SARI_01052"
+ /note="The AAA+ (ATPases Associated with a wide variety of
+ cellular Activities) superfamily represents an ancient
+ group of ATPases belonging to the ASCE (for additional
+ strand, catalytic E) division of the P-loop NTPase fold.
+ The ASCE division also includes ABC; Region: AAA; cd00009"
+ /db_xref="CDD:99707"
+ misc_feature 1023828..1023851
+ /gene="ruvB"
+ /locus_tag="SARI_01052"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature order(1023831..1023854,1023981..1023983,1024128..1024130)
+ /gene="ruvB"
+ /locus_tag="SARI_01052"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:99707"
+ misc_feature 1023969..1023986
+ /gene="ruvB"
+ /locus_tag="SARI_01052"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature 1024164..1024166
+ /gene="ruvB"
+ /locus_tag="SARI_01052"
+ /note="arginine finger; other site"
+ /db_xref="CDD:99707"
+ misc_feature 1024413..1024637
+ /gene="ruvB"
+ /locus_tag="SARI_01052"
+ /note="Holliday junction DNA helicase ruvB C-terminus;
+ Region: RuvB_C; pfam05491"
+ /db_xref="CDD:203257"
+ unsure 1024290..1025172
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(1024701..1025486)
+ /gene="znuB"
+ /locus_tag="SARI_01053"
+ CDS complement(1024701..1025486)
+ /gene="znuB"
+ /locus_tag="SARI_01053"
+ /inference="protein motif:HMMPfam:IPR001626"
+ /inference="similar to AA sequence:REFSEQ:NP_460850.1"
+ /note="involved in transport of zinc(II) with ZnuA and C"
+ /codon_start=1
+ /transl_table=11
+ /product="high-affinity zinc transporter membrane
+ component"
+ /protein_id="YP_001570103.1"
+ /db_xref="GI:161502991"
+ /db_xref="InterPro:IPR001626"
+ /translation="MIELLLPGWLAGMMLACAAGPLGSFVVWRRMSYFGDTLAHASLL
+ GVAFGLLLDVNPFYAVIVVTLLLAAGLVWLEKRPHLAIDTLLGIMAHSALSLGLVVVS
+ LMSNVRVDLMAYLFGDLLAVTPEDLISIATGVVIVLAILSWQWRNLLSMTISPDLAFV
+ DGVKLQRVKLLLMLVTALTIGVAMKFVGALIITSLLIIPAATARRFARTPEQMAGVAV
+ VTGMLAVTGGLTFSAFYDTPAGPSVVLCAALLFIFSMLKKQAS"
+ misc_feature complement(1024713..1025486)
+ /gene="znuB"
+ /locus_tag="SARI_01053"
+ /note="ABC-type Mn2+/Zn2+ transport systems, permease
+ components [Inorganic ion transport and metabolism];
+ Region: ZnuB; COG1108"
+ /db_xref="CDD:224033"
+ misc_feature complement(1024722..1025474)
+ /gene="znuB"
+ /locus_tag="SARI_01053"
+ /note="Transmembrane subunit (TM), of Periplasmic Binding
+ Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters involved in the uptake of siderophores, heme,
+ vitamin B12, or the divalent cations Mg2+ and Zn2+.
+ PBP-dependent ABC transporters consist of...; Region:
+ TM_ABC_iron-siderophores_like; cd06550"
+ /db_xref="CDD:119348"
+ misc_feature complement(order(1024857..1024859,1024878..1024880,
+ 1025004..1025012,1025016..1025033,1025037..1025042,
+ 1025046..1025054,1025058..1025063,1025400..1025408,
+ 1025418..1025420))
+ /gene="znuB"
+ /locus_tag="SARI_01053"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119348"
+ misc_feature complement(order(1024722..1024724,1024731..1024736,
+ 1024743..1024745,1024752..1024757,1024764..1024766,
+ 1024911..1024913,1025139..1025141,1025148..1025153,
+ 1025181..1025183,1025187..1025192,1025199..1025201,
+ 1025208..1025213,1025220..1025225,1025232..1025237,
+ 1025241..1025243,1025382..1025384,1025397..1025399,
+ 1025403..1025405))
+ /gene="znuB"
+ /locus_tag="SARI_01053"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119348"
+ misc_feature complement(order(1024773..1024775,1024788..1024790,
+ 1024923..1024925,1024935..1024937,1025109..1025111,
+ 1025181..1025183))
+ /gene="znuB"
+ /locus_tag="SARI_01053"
+ /note="putative PBP binding regions; other site"
+ /db_xref="CDD:119348"
+ gene complement(1025483..1026238)
+ /gene="znuC"
+ /locus_tag="SARI_01054"
+ CDS complement(1025483..1026238)
+ /gene="znuC"
+ /locus_tag="SARI_01054"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="similar to AA sequence:INSD:"
+ /note="involved in transport of zinc(II) with ZnuA and C"
+ /codon_start=1
+ /transl_table=11
+ /product="high-affinity zinc transporter ATPase"
+ /protein_id="YP_001570104.1"
+ /db_xref="GI:161502992"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MTSLVSLENVSVSFGARRVLSDVSLELSPGKILTLLGPNGAGKS
+ TLVRVVLGLVAPDEGVIKRNGQLRIGYVPQKLYLDTTLPLTVNRFLRLRPATQKTDIL
+ PALKRVQAGHLIDAPMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALY
+ DLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNHHICCSGTPEVVSMHPEFISMFG
+ PRGAEQLGIYRHHHNHRHDLQGRIVLRRGNGHS"
+ misc_feature complement(1025486..1026238)
+ /gene="znuC"
+ /locus_tag="SARI_01054"
+ /note="high-affinity zinc transporter ATPase; Reviewed;
+ Region: znuC; PRK09544"
+ /db_xref="CDD:181939"
+ misc_feature complement(1025633..1026223)
+ /gene="znuC"
+ /locus_tag="SARI_01054"
+ /note="ATP-binding cassette domain of the metal-type
+ transporters; Region: ABC_Metallic_Cations; cd03235"
+ /db_xref="CDD:213202"
+ gene 1026302..1027261
+ /gene="znuA"
+ /locus_tag="SARI_01055"
+ CDS 1026302..1027261
+ /gene="znuA"
+ /locus_tag="SARI_01055"
+ /inference="protein motif:HMMPfam:IPR006127"
+ /inference="similar to AA sequence:INSD:AAV76953.1"
+ /note="involved in transport of zinc(II) with ZnuA and C"
+ /codon_start=1
+ /transl_table=11
+ /product="high-affinity zinc transporter periplasmic
+ component"
+ /protein_id="YP_001570105.1"
+ /db_xref="GI:161502993"
+ /db_xref="InterPro:IPR006127"
+ /translation="MIGRIMLQKNTLLFAALSAALWGSATQAADAAVVASLKPLGFIA
+ SAIADGVTDTQVLLPDGASEHDYSLRPSDVKRLQGADLVVWVGPEMEAFMEKSVRNIP
+ DNKQVIIAQLSDVKPLLMKGADDDEDEHAHAHTGDEKGDEHHHHGEYNMHLWLSPEIA
+ RATAVAIHKKLVELMPQSRAKLDANLKDFEAQLAATDKQVGNELAPLKGKGYFVFHDA
+ YGYYEKHYGLTPLGHFTVNPEIQPGAQRLHEIRTQLVEQKATCVFAEPQFRPAVVEAV
+ ARGTSVRMGTLDPLGTNIKLGKTSYSAFLSQLANQYASCLKGD"
+ misc_feature 1026320..1027252
+ /gene="znuA"
+ /locus_tag="SARI_01055"
+ /note="high-affinity zinc transporter periplasmic
+ component; Reviewed; Region: znuA; PRK09545"
+ /db_xref="CDD:236558"
+ misc_feature 1026407..1027249
+ /gene="znuA"
+ /locus_tag="SARI_01055"
+ /note="Zinc binding protein ZnuA. These proteins have been
+ shown to function as initial receptors in the ABC uptake
+ of Zn2+. They belong to the TroA superfamily of
+ periplasmic metal binding proteins that share a distinct
+ fold and ligand binding mechanism; Region: ZnuA; cd01019"
+ /db_xref="CDD:238501"
+ misc_feature order(1026494..1026496,1026755..1026757,1026947..1026949,
+ 1027163..1027165)
+ /gene="znuA"
+ /locus_tag="SARI_01055"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:238501"
+ gene 1027340..1028596
+ /locus_tag="SARI_01056"
+ CDS 1027340..1028596
+ /locus_tag="SARI_01056"
+ /inference="protein motif:HMMPfam:IPR002482"
+ /inference="protein motif:HMMPfam:IPR002886"
+ /inference="protein motif:HMMSmart:IPR002482"
+ /inference="protein motif:superfamily:IPR011054"
+ /inference="similar to AA sequence:REFSEQ:YP_150266.1"
+ /note="'KEGG: spt:SPA0979 3.7e-221 yebA; hypothetical
+ protein;
+ COG: COG0739 Membrane proteins related to
+ metalloendopeptidases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570106.1"
+ /db_xref="GI:161502994"
+ /db_xref="InterPro:IPR002482"
+ /db_xref="InterPro:IPR002886"
+ /db_xref="InterPro:IPR011054"
+ /translation="MLGSLTVLTLAVAVWRPYVYHPESAPIIKTIELEKSEIRSLLPE
+ ASEPIDQAAQEDEAIPQDELDDKTAGEVGVHEYVVSTGDTLSSILNQYGIDMGDISRL
+ AASDKELRNLKIGQQLSWTLTADGDLQRLTWEVSRRETRTYDRTANGFKMSSEMQQGD
+ WVNSLLKGTVGGSFVASAKEAGLTSSEISAVIKAMQWQMDFRKLKKGDEFSVLMSREM
+ LDGKREQSQLLGVRMRSDGKDYYAIRAADGKFYDRNGVGLAKGFLRFPTAKQFRISSN
+ FNPRRLNPVTGRVAPHRGVDFAMPQGTPVLSVGDGEVVVAKRSGAAGYYIAIRHGRTY
+ TTRYMHLRKLLVKPGQKVKRGDRIALSGNTGRSTGPHLHYEVWINQQAVNPLTAKLPR
+ TEGLTGSDRREYLAQVKEVLPQLRFD"
+ misc_feature 1027340..1028593
+ /locus_tag="SARI_01056"
+ /note="putative peptidase; Provisional; Region: PRK11649"
+ /db_xref="CDD:236946"
+ misc_feature 1027568..1027693
+ /locus_tag="SARI_01056"
+ /note="Lysine Motif is a small domain involved in binding
+ peptidoglycan; Region: LysM; cd00118"
+ /db_xref="CDD:212030"
+ misc_feature 1028210..1028494
+ /locus_tag="SARI_01056"
+ /note="Peptidase family M23; Region: Peptidase_M23;
+ pfam01551"
+ /db_xref="CDD:216566"
+ gene 1028713..1029684
+ /locus_tag="SARI_01057"
+ CDS 1028713..1029684
+ /locus_tag="SARI_01057"
+ /inference="protein motif:HMMPfam:IPR004960"
+ /inference="protein motif:HMMTigr:IPR011921"
+ /inference="similar to AA sequence:INSD:AAO68660.1"
+ /note="'Transfers myristate or laurate, activated on ACP,
+ to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA'"
+ /codon_start=1
+ /transl_table=11
+ /product="lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA
+ acyltransferase"
+ /protein_id="YP_001570107.1"
+ /db_xref="GI:161502995"
+ /db_xref="InterPro:IPR004960"
+ /db_xref="InterPro:IPR011921"
+ /translation="METKKNNSEYIPEFEKSFHYPQYWGAWLGAAAMAGMALTPASFR
+ DPLLATLGRFAGRLGKSSRRRALINLSLCFPQRSEAEREAIVDEMFATAPQAMAMMAE
+ LAMRGPEKIQQRVEWEGLEIIEEMRRNDEKVIFLVPHGWGVDIPAMLMASQGQKMAAM
+ FHNQGNPVFDYIWNTVRRRFGGRLHARNDGIKPFIQSVRQGYWGYYLPDQDHGPEHSE
+ FVDFFATYKATLPAIGRLMKVCRARVIPLFPVYNGKTHRLTIQVRPPMDDLLAADDHT
+ IARRMNEEVEIFVGPHPEQYTWILKLLKTRKPGEIQPYKRKDLYPIK"
+ misc_feature 1028743..1029627
+ /locus_tag="SARI_01057"
+ /note="Bacterial lipid A biosynthesis acyltransferase;
+ Region: Lip_A_acyltrans; pfam03279"
+ /db_xref="CDD:112109"
+ misc_feature 1029046..1029624
+ /locus_tag="SARI_01057"
+ /note="Lysophospholipid Acyltransferases (LPLATs) of
+ Glycerophospholipid Biosynthesis: LABLAT-like; Region:
+ LPLAT_LABLAT-like; cd07984"
+ /db_xref="CDD:153246"
+ misc_feature order(1029127..1029129,1029136..1029138,1029142..1029144,
+ 1029193..1029204,1029340..1029348)
+ /locus_tag="SARI_01057"
+ /note="putative acyl-acceptor binding pocket; other site"
+ /db_xref="CDD:153246"
+ gene complement(1029769..1031211)
+ /locus_tag="SARI_01058"
+ CDS complement(1029769..1031211)
+ /locus_tag="SARI_01058"
+ /inference="protein motif:BlastProDom:IPR001697"
+ /inference="protein motif:HMMPanther:IPR001697"
+ /inference="protein motif:HMMPfam:IPR001697"
+ /inference="protein motif:HMMTigr:IPR001697"
+ /inference="protein motif:ScanRegExp:IPR001697"
+ /inference="protein motif:superfamily:IPR001697"
+ /inference="protein motif:superfamily:IPR011037"
+ /inference="similar to AA sequence:REFSEQ:YP_150268.1"
+ /note="catalyzes the formation of phosphoenolpyruvate from
+ pyruvate"
+ /codon_start=1
+ /transl_table=11
+ /product="pyruvate kinase"
+ /protein_id="YP_001570108.1"
+ /db_xref="GI:161502996"
+ /db_xref="InterPro:IPR001697"
+ /db_xref="InterPro:IPR011037"
+ /translation="MSRRLRRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGSP
+ EDHKMRADKVREIAAKLGRHVAILGDLQGPKIRVSTFKEGKVFLNIGDKFLLDANLGK
+ GEGDKEKVGIDYKGLPADVVPGDILLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNK
+ GINKLGGGLSAEALTEKDKADIRTAALIGVDYLAVSFPRCGEDLNYARRLARDAGCDA
+ KIVAKVERAEAVCDQNAMDDIILASDVVMVARGDLGVEIGDPELVGIQKALIRRARQL
+ NRAVITATQMMESMITNPMPTRAEVMDVANAVLDGTDAVMLSAETAAGQYPSETVAAM
+ ARVCLGAEKIPSINVSKHRLDVQFDNVEEAIAMSAMYAANHLKGVTAIITMTESGRTA
+ LMTSRISSGLPIFAMSRHERTLNLTALYRGVTPVHFDSAADGVVAAHEAVNLLRDKGY
+ LVSGDLVIVTQGDVMSTIGSTNTTRILTVE"
+ misc_feature complement(1029805..1031205)
+ /locus_tag="SARI_01058"
+ /note="pyruvate kinase; Provisional; Region: PRK05826"
+ /db_xref="CDD:235619"
+ misc_feature complement(1029775..1031199)
+ /locus_tag="SARI_01058"
+ /note="Pyruvate kinase (PK): Large allosteric enzyme that
+ regulates glycolysis through binding of the substrate,
+ phosphoenolpyruvate, and one or more allosteric effectors.
+ Like other allosteric enzymes, PK has a high substrate
+ affinity R state and a low...; Region: Pyruvate_Kinase;
+ cl17342"
+ /db_xref="CDD:247896"
+ misc_feature complement(order(1029946..1029954,1029958..1029960,
+ 1029964..1029969,1029976..1029978,1030009..1030011,
+ 1030015..1030017,1030021..1030023,1030177..1030182,
+ 1030186..1030188,1030273..1030275,1030279..1030281,
+ 1030375..1030377,1030387..1030392,1030444..1030446,
+ 1030561..1030563,1030594..1030596,1030615..1030617,
+ 1030639..1030641,1030684..1030698,1030705..1030707,
+ 1030723..1030728,1030981..1030992,1031014..1031016,
+ 1031020..1031022,1031188..1031193))
+ /locus_tag="SARI_01058"
+ /note="domain interfaces; other site"
+ /db_xref="CDD:238178"
+ misc_feature complement(order(1030360..1030362,1030456..1030458,
+ 1030537..1030539,1030543..1030545,1030621..1030623,
+ 1031002..1031004,1031098..1031100,1031104..1031106))
+ /locus_tag="SARI_01058"
+ /note="active site"
+ /db_xref="CDD:238178"
+ gene complement(1031335..1032204)
+ /locus_tag="SARI_01059"
+ CDS complement(1031335..1032204)
+ /locus_tag="SARI_01059"
+ /inference="protein motif:HMMPfam:IPR000281"
+ /inference="protein motif:HMMPfam:IPR001347"
+ /inference="similar to AA sequence:REFSEQ:NP_456454.1"
+ /note="'Represses the expression of the zwf, eda, glp and
+ gap'"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional regulator HexR"
+ /protein_id="YP_001570109.1"
+ /db_xref="GI:161502997"
+ /db_xref="InterPro:IPR000281"
+ /db_xref="InterPro:IPR001347"
+ /translation="MNMLEKVQSQLEHLSKSERKVADVILAAPGRSIHLSIAMLAQEA
+ NVSEPTVNRFCRSMNTRGFPDFKLHLAQSLANGTPYVNRNVDEDDSVEAYTGKIFESA
+ MASLDHVRQSLDKSAVNRAVDLLTQAKKIAFFGLGSSAAVAHDAMNKFFRFNVPVIYS
+ DDIVLQRMSCMNCSDDDVVVLISHTGRTKSLVELAQLARENDAMVIALTSAGTPLARE
+ ATLAITLDVPEDTDIYMPMVSRLAQLTVIDVLATGFTLRRGAKFRDNLKRVKEALKES
+ RFDKELLSRSDGR"
+ misc_feature complement(1031356..1032204)
+ /locus_tag="SARI_01059"
+ /note="DNA-binding transcriptional regulator HexR;
+ Provisional; Region: PRK11302"
+ /db_xref="CDD:183082"
+ misc_feature complement(1031974..1032204)
+ /locus_tag="SARI_01059"
+ /note="Helix-turn-helix domain, rpiR family; Region:
+ HTH_6; pfam01418"
+ /db_xref="CDD:201784"
+ misc_feature complement(1031446..1031859)
+ /locus_tag="SARI_01059"
+ /note="RpiR-like protein. RpiR contains a SIS (Sugar
+ ISomerase) domain, which is found in many phosphosugar
+ isomerases and phosphosugar binding proteins. In E. coli,
+ rpiR negatively regulates the expression of rpiB gene.
+ Both rpiB and rpiA are ribose phosphate...; Region:
+ SIS_RpiR; cd05013"
+ /db_xref="CDD:240144"
+ misc_feature complement(order(1031656..1031658,1031788..1031790))
+ /locus_tag="SARI_01059"
+ /note="putative active site [active]"
+ /db_xref="CDD:240144"
+ gene 1032546..1034021
+ /locus_tag="SARI_01060"
+ CDS 1032546..1034021
+ /locus_tag="SARI_01060"
+ /inference="protein motif:BlastProDom:IPR001282"
+ /inference="protein motif:HMMPfam:IPR001282"
+ /inference="protein motif:HMMPIR:IPR001282"
+ /inference="protein motif:HMMTigr:IPR001282"
+ /inference="protein motif:ScanRegExp:IPR001282"
+ /inference="similar to AA sequence:REFSEQ:NP_460843.1"
+ /note="'catalyzes the formation of D-glucono-1,5-lactone
+ 6-phosphate from D-glucose 6-phosphate'"
+ /codon_start=1
+ /transl_table=11
+ /product="glucose-6-phosphate 1-dehydrogenase"
+ /protein_id="YP_001570110.1"
+ /db_xref="GI:161502998"
+ /db_xref="InterPro:IPR001282"
+ /translation="MAVTQTAQACDLVIFGAKGDLARRKLLPSLYQLEKAGQIHPDTR
+ IIGVGRADWDKEAYTHVVREALETFMKEKIDEGLWDTLSGRLDFCNLDVNDTPAFSRL
+ GDMLDQKNRTTINYFAMPPSTFGAICKGLGEAKLNAKPARVVMEKPLGTSLATSREIN
+ DRVGEYFEECQVYRIDHYLGKETVLNLLALRFANSLFVNNWDNRTIDHVEITVAEEVG
+ IEGRWGYFDQAGQMRDMIQNHLLQILCMIAMSPPSDLSADSIRDEKVKVLKSLRRIDR
+ SNVREKTVRGQYTAGFAQGKKVPGYLEEEGANKSSNTETFVAIRVDIDNWRWAGVPFY
+ LRTGKRLPTKCSEVVVYFKTPELNLFKESWQDLPQNKLTIRLQPDEGVDIQVLNKVPG
+ LDHKHNLQITKLDLSYSETFNQTHLADAYERLLLETMRGIQALFVRRDEVEEAWKWVD
+ SITEAWAMDNDAPKPYQAGTWGPVASVAMITRDGRSWNEFE"
+ misc_feature 1032546..1034012
+ /locus_tag="SARI_01060"
+ /note="glucose-6-phosphate 1-dehydrogenase; Validated;
+ Region: PRK05722"
+ /db_xref="CDD:235579"
+ misc_feature 1032582..1033103
+ /locus_tag="SARI_01060"
+ /note="Glucose-6-phosphate dehydrogenase, NAD binding
+ domain; Region: G6PD_N; pfam00479"
+ /db_xref="CDD:215937"
+ misc_feature 1033107..1034015
+ /locus_tag="SARI_01060"
+ /note="Glucose-6-phosphate dehydrogenase, C-terminal
+ domain; Region: G6PD_C; pfam02781"
+ /db_xref="CDD:217228"
+ gene 1034256..1036067
+ /locus_tag="SARI_01061"
+ CDS 1034256..1036067
+ /locus_tag="SARI_01061"
+ /inference="protein motif:BlastProDom:IPR000581"
+ /inference="protein motif:HMMPanther:IPR000581"
+ /inference="protein motif:HMMPfam:IPR000581"
+ /inference="protein motif:HMMTigr:IPR004786"
+ /inference="protein motif:ScanRegExp:IPR000581"
+ /note="catalyzes the formation of
+ 2-dehydro-3-deoxy-6-phospho-D-gluconate from
+ 6-phospho-D-gluconate"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphogluconate dehydratase"
+ /protein_id="YP_001570111.1"
+ /db_xref="GI:161502999"
+ /db_xref="InterPro:IPR000581"
+ /db_xref="InterPro:IPR004786"
+ /translation="MNPNLLRVTQRIVERSQQTRKAYLARIEQAKTATVHRSQLACGN
+ LAHGFAACQPEDKASLKSMLRNNIAIITSYNDMLSAHQPYEHYPEIIRQALHSVNAVG
+ QVAGGVPAMCDGVTQGQDGMELSLLSREVIAMSAAVGLSHNMFDGALFLGVCDKIVPG
+ LAMAALSFGHLPAIFVPSGPMASGLPNKEKVRIRQLYAEGKVDRMALLESEAASYHAP
+ GTCTFYGTANTNQMMVEFMGMQLPGSSFVHPDAPLREALTAAAARQVTRLTGNGNSWM
+ PLGKMIDEKVVVNGIVALLATGGSTNHTMHLVAMARAAGILINWDDFSDLSEVVPLMA
+ RLYPNGPADINHFQAAGGVPVLARELLNAGLLHEDVNTVAGFGLKRYTLEPWLNNGEL
+ DWREGAEKSLDSDVIASFDKPFSPHGGTKVLSGNLGRAVMKTSAVPVENQIIEAPAVV
+ FESQHDVLPAFDAGLLDRDCVVVVRHQGPKANGMPELHKLMPPLGVLLDRCFKIALVT
+ DGRLSGASGKVPSAIHVTPEAYDGGLLAKVRDGDIIRVNGQTGELTLLVDEAELAARQ
+ PHSPDLSASRIGTGRELFGALREKLSGAEQGATCIAF"
+ misc_feature 1034256..1036064
+ /locus_tag="SARI_01061"
+ /note="phosphogluconate dehydratase; Validated; Region:
+ PRK09054"
+ /db_xref="CDD:181628"
+ misc_feature 1034259..1036058
+ /locus_tag="SARI_01061"
+ /note="6-phosphogluconate dehydratase; Region: edd;
+ TIGR01196"
+ /db_xref="CDD:130264"
+ unsure 1035721..1035735
+ /locus_tag="SARI_01061"
+ /note="Sequence derived from one plasmid subclone"
+ gene 1036105..1036746
+ /locus_tag="SARI_01062"
+ CDS 1036105..1036746
+ /locus_tag="SARI_01062"
+ /inference="protein motif:HMMPfam:IPR000887"
+ /inference="protein motif:HMMTigr:IPR000887"
+ /inference="protein motif:ScanRegExp:IPR000887"
+ /inference="similar to AA sequence:REFSEQ:NP_460841.1"
+ /note="catalyzes the formation of pyruvate and glyoxylate
+ from 4-hydroxy-2-oxoglutarate; or pyruvate and
+ D-glyceraldehyde 3-phosphate from
+ 2-dehydro-3-deoxy-D-glyconate 6-phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="keto-hydroxyglutarate-aldolase/keto-deoxy-
+ phosphogluconate aldolase"
+ /protein_id="YP_001570112.1"
+ /db_xref="GI:161503000"
+ /db_xref="InterPro:IPR000887"
+ /translation="MKNWKTSAEAILTTGPVVPVIVVNKLEHAVPMAKALVAGGVRVL
+ EVTLRTACAMEAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISPGLTEPLLK
+ AATEGTIPLIPGISTVSELMLGMDYGLKAFKFFPAEANGGTKALQAIAGPFSQVRFCP
+ TGGISPANYRDYLALKSVLCIGGSWLVPADALEAGDYDRITKLAREAVEGAKQ"
+ misc_feature 1036105..1036740
+ /locus_tag="SARI_01062"
+ /note="keto-hydroxyglutarate-aldolase/keto-deoxy-
+ phosphogluconate aldolase; Provisional; Region: PRK05718"
+ /db_xref="CDD:235577"
+ misc_feature 1036138..1036713
+ /locus_tag="SARI_01062"
+ /note="KDPG and KHG aldolase; Region: KDPG_aldolase;
+ cd00452"
+ /db_xref="CDD:188632"
+ misc_feature order(1036162..1036164,1036237..1036239,1036249..1036251,
+ 1036321..1036323,1036501..1036503,1036507..1036509,
+ 1036585..1036587)
+ /locus_tag="SARI_01062"
+ /note="active site"
+ /db_xref="CDD:188632"
+ misc_feature order(1036249..1036251,1036321..1036323,1036327..1036329,
+ 1036384..1036395,1036453..1036464,1036468..1036470,
+ 1036480..1036482,1036507..1036512,1036546..1036548,
+ 1036558..1036563)
+ /locus_tag="SARI_01062"
+ /note="intersubunit interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:188632"
+ misc_feature 1036501..1036503
+ /locus_tag="SARI_01062"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:188632"
+ gene complement(1036843..1038021)
+ /gene="purT"
+ /locus_tag="SARI_01063"
+ CDS complement(1036843..1038021)
+ /gene="purT"
+ /locus_tag="SARI_01063"
+ /inference="protein motif:Gene3D:IPR013816"
+ /inference="protein motif:Gene3D:IPR013817"
+ /inference="protein motif:HMMPfam:IPR003135"
+ /inference="protein motif:HMMTigr:IPR005862"
+ /inference="similar to AA sequence:REFSEQ:NP_460840.1"
+ /note="'non-folate utilizing enzyme, catalyzes the
+ production of beta-formyl glycinamide ribonucleotide from
+ formate, ATP, and beta-GAR and a side reaction producing
+ acetyl phosphate and ADP from acetate and ATP; involved in
+ de novo purine biosynthesis'"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphoribosylglycinamide formyltransferase 2"
+ /protein_id="YP_001570113.1"
+ /db_xref="GI:161503001"
+ /db_xref="InterPro:IPR003135"
+ /db_xref="InterPro:IPR005862"
+ /db_xref="InterPro:IPR013816"
+ /db_xref="InterPro:IPR013817"
+ /translation="MTLLGTALRPAATRVMLLGSGELGKEVAIECQRLGIEVIAVDRY
+ PDAPAMHVAHRSHVINMLDGEALRHVIAVEKPHYIVPEIEAIATDTLRDLEDEGLNVV
+ PCARATQLTMNREGIRRLAAEELGLPTSTYRFADSEASFRDAVAAVGFPCIVKPVMSS
+ SGKGQSFIRSPEQLAQAWKYAQQGGRAGAGRVIVEGVVKFDFEITLLTVSAVDGVYFC
+ APVGHRQQDGDYRESWQPQQMSELALKRAQEIARHVVLALGGHGLFGVELFVCGDEVI
+ FSEVSPRPHDTGMVTLISQDLSEFALHVRAFLGLPVGAIRQYGPAASAVILPQLTSRN
+ VTFDNVQAAVGAGLQVRFFGKPEIDGARRLGVALATGENVEEAVIRAKKAVSSVIVKE
+ "
+ misc_feature complement(1036849..1038021)
+ /gene="purT"
+ /locus_tag="SARI_01063"
+ /note="phosphoribosylglycinamide formyltransferase 2;
+ Validated; Region: purT; PRK09288"
+ /db_xref="CDD:236454"
+ misc_feature complement(<1037782..1037982)
+ /gene="purT"
+ /locus_tag="SARI_01063"
+ /note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
+ NADB_Rossmann; cl09931"
+ /db_xref="CDD:245206"
+ misc_feature complement(1037137..1037658)
+ /gene="purT"
+ /locus_tag="SARI_01063"
+ /note="ATP-grasp domain; Region: ATP-grasp; pfam02222"
+ /db_xref="CDD:216935"
+ gene 1038152..1038442
+ /locus_tag="SARI_01064"
+ CDS 1038152..1038442
+ /locus_tag="SARI_01064"
+ /inference="protein motif:HMMPfam:IPR009813"
+ /inference="similar to AA sequence:REFSEQ:YP_216874.1"
+ /note="'COG: COG3141 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA damage-inducible protein YebG"
+ /protein_id="YP_001570114.1"
+ /db_xref="GI:161503002"
+ /db_xref="InterPro:IPR009813"
+ /translation="MAVEVKYVVIREGEEKMSFTSKKEADAWDKMLDTADLLDTWLEQ
+ SPVVLEDGQREALSLWLAEHKEVLSTILKTGKLPSPQAVEKDAVSKTKKQAA"
+ misc_feature 1038152..1038439
+ /locus_tag="SARI_01064"
+ /note="DNA damage-inducible protein YebG; Provisional;
+ Region: PRK10061"
+ /db_xref="CDD:182216"
+ gene 1038474..1038866
+ /locus_tag="SARI_01065"
+ CDS 1038474..1038866
+ /locus_tag="SARI_01065"
+ /inference="similar to AA sequence:INSD:AAV76962.1"
+ /note="secreted protein; unknown function"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570115.1"
+ /db_xref="GI:161503003"
+ /translation="MLFLNHCAKEKSMNKRGALLSLLLLSASVSAFAASTESKSVKFP
+ QCEGLDAAGIAASVKRDYQQNRIVRWADDQKKVGQADPVAWVNVQDVVGQNDKWTVPL
+ TVRGKSADIHYQVSVDCKAGTAEYKPRQ"
+ misc_feature <1038582..1038860
+ /locus_tag="SARI_01065"
+ /note="hypothetical protein; Provisional; Region:
+ PRK13680"
+ /db_xref="CDD:184237"
+ gene 1038957..1039616
+ /locus_tag="SARI_01066"
+ CDS 1038957..1039616
+ /locus_tag="SARI_01066"
+ /inference="protein motif:HMMPfam:IPR007486"
+ /inference="similar to AA sequence:REFSEQ:YP_216872.1"
+ /note="'COG: COG2979 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570116.1"
+ /db_xref="GI:161503004"
+ /db_xref="InterPro:IPR007486"
+ /translation="MANWLNQLQSLLGQKGASASPSGEQGLNKLLVPGALGGLAGLLV
+ ANKSSRKLLTKYGAGALLVGGGAVAGSVLWNKYKDKVRAAHQGEPQFGSQSTPLDVRT
+ ERLILALVFAAKSDGHIDAKERAAIEHQLRESGVEEQGRVFIEKAIEQPLDPQRLAQG
+ VRNEEEALEVYFLSCAAIDIDHFMERSYLNALGDALKIPQDVRDGIEQDLQQQKQALP
+ G"
+ misc_feature 1038957..1039607
+ /locus_tag="SARI_01066"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG2979"
+ /db_xref="CDD:225526"
+ misc_feature 1039269..1039550
+ /locus_tag="SARI_01066"
+ /note="tellurium resistance terB-like protein, subgroup 3;
+ Region: terB_like_YebE; cd07178"
+ /db_xref="CDD:143582"
+ misc_feature order(1039302..1039304,1039323..1039325,1039497..1039499,
+ 1039509..1039511)
+ /locus_tag="SARI_01066"
+ /note="putative metal binding site [ion binding]; other
+ site"
+ /db_xref="CDD:143582"
+ gene 1039829..1041880
+ /locus_tag="SARI_01067"
+ CDS 1039829..1041880
+ /locus_tag="SARI_01067"
+ /inference="protein motif:FPrintScan:IPR002470"
+ /inference="protein motif:HMMPanther:IPR002470"
+ /inference="protein motif:HMMPfam:IPR001375"
+ /inference="protein motif:HMMPfam:IPR004106"
+ /inference="protein motif:ScanRegExp:IPR002471"
+ /note="PtrB; oligopeptidase that cleaves peptide bonds
+ following arginine and lysine residues"
+ /codon_start=1
+ /transl_table=11
+ /product="protease 2"
+ /protein_id="YP_001570117.1"
+ /db_xref="GI:161503005"
+ /db_xref="InterPro:IPR001375"
+ /db_xref="InterPro:IPR002470"
+ /db_xref="InterPro:IPR002471"
+ /db_xref="InterPro:IPR004106"
+ /translation="MLPKANRIPYAMTVHGDTRIDNYYWLRDDTRSQPEVLDYLHQEN
+ EYGRRVMTSQQALQDRILKEIIDRIPPREVSAPYVKNGYRYRYIYEPGCEYAIYQRQS
+ AFCEEWDEWETLLDANQRAAHSEFYTLGGLAITPDNTIMALAEDYLSRRQYGLRFRNL
+ ESGNWYPELLDNVAPEFVWANDSLTLYYVRKHKKTLLPYQVWRHTIGTPSSQDEMVYE
+ EKDDTFYVSLHKTTSQHYVVIHLASATTSEVLLLDAELADAEPFSFLPRRKDHEYSLD
+ HYQHKFYLRSNRNGKNFGLYRTRVRNENAWEELIPPREHIMLEGFTLFTDWLVVEERQ
+ RGLTSLRQINRKTREVIGIAFDDPAYVTWLAYNPEPETSRLRYGYSSMTTPDTLFELD
+ MDTGERRVLKQTEVPGFDSGCYRSEHLWIMARDGVEVPVSLVYHQKYFRKGQNPLLVY
+ GYGSYGSSIDADFSSSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKRNTFNDY
+ LDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINERPELFHGVIAQVPFVDVLTTML
+ DESIPLTTGEFEEWGNPQYIEYYDYIKSYSPYDNVKAQNYPHLLVTTGLHDSQVQYWE
+ PAKWVAKLRELKTDDCLLLLCTDMDSGHGGKSGRFKSYEGVALEFAFLIGLAQGTLHS
+ A"
+ misc_feature 1039829..1041877
+ /locus_tag="SARI_01067"
+ /note="protease 2; Provisional; Region: PRK10115"
+ /db_xref="CDD:182247"
+ misc_feature 1041242..1041844
+ /locus_tag="SARI_01067"
+ /note="Prolyl oligopeptidase family; Region: Peptidase_S9;
+ pfam00326"
+ /db_xref="CDD:215859"
+ gene complement(1041919..1042614)
+ /locus_tag="SARI_01068"
+ CDS complement(1041919..1042614)
+ /locus_tag="SARI_01068"
+ /inference="protein motif:HMMPfam:IPR013520"
+ /inference="protein motif:HMMSmart:IPR006055"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:INSD:AAX65789.1"
+ /note="3'-5' exonuclease activity on single or
+ double-strand DNA"
+ /codon_start=1
+ /transl_table=11
+ /product="exodeoxyribonuclease X"
+ /protein_id="YP_001570118.1"
+ /db_xref="GI:161503006"
+ /db_xref="InterPro:IPR006055"
+ /db_xref="InterPro:IPR012337"
+ /db_xref="InterPro:IPR013520"
+ /translation="MLRIIDTETCGLQGGIVEIASVDVIDGNIVNPMSHLIRPDRPIT
+ PQAMAIHRITESMVADKPWIEDVIPLYYGSQWYVAHNASFDRRVLPELPGEWICTMKL
+ SRRLWPGIKYSNMALYKSRKLSVQTPPGLHHHRALYDCYITAALLIDIIRTTGWTEEE
+ MVNITGRPALLTTFPFGKYRGKAVSEIAKRDPGYLRWLFNNLDNMSPELRLTLKHYLE
+ DAQAGQQRGNGTP"
+ misc_feature complement(1041958..1042614)
+ /locus_tag="SARI_01068"
+ /note="exodeoxyribonuclease X; Provisional; Region:
+ PRK07983"
+ /db_xref="CDD:181186"
+ misc_feature complement(1042171..1042605)
+ /locus_tag="SARI_01068"
+ /note="DEDDh 3'-5' exonuclease domain family;
+ Region: DEDDh; cd06127"
+ /db_xref="CDD:176648"
+ misc_feature complement(order(1042198..1042200,1042213..1042215,
+ 1042360..1042368,1042372..1042377,1042582..1042584,
+ 1042588..1042599))
+ /locus_tag="SARI_01068"
+ /note="active site"
+ /db_xref="CDD:176648"
+ misc_feature complement(order(1042198..1042200,1042213..1042215,
+ 1042360..1042362,1042591..1042593,1042597..1042599))
+ /locus_tag="SARI_01068"
+ /note="catalytic site [active]"
+ /db_xref="CDD:176648"
+ misc_feature complement(order(1042198..1042200,1042213..1042215,
+ 1042363..1042368,1042372..1042377,1042582..1042584,
+ 1042588..1042599))
+ /locus_tag="SARI_01068"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:176648"
+ gene complement(1042638..1043294)
+ /locus_tag="SARI_01069"
+ CDS complement(1042638..1043294)
+ /locus_tag="SARI_01069"
+ /inference="protein motif:Gene3D:IPR003010"
+ /inference="protein motif:HMMPfam:IPR003010"
+ /inference="protein motif:superfamily:IPR003010"
+ /inference="similar to AA sequence:REFSEQ:YP_150278.1"
+ /note="'KEGG: psp:PSPPH_2956 0.00086 hydrolase,
+ carbon-nitrogen family K01950;
+ COG: COG0388 Predicted amidohydrolase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570119.1"
+ /db_xref="GI:161503007"
+ /db_xref="InterPro:IPR003010"
+ /translation="MSSWKIAAAQYAPLNASPAEHVAHHLEYIELAARQQCELLVFPS
+ LSLSGCGERNKPLPAPPDEALLQPLIHAACTHSMTIIVGMPVEHNCRFVKGIAIFAPW
+ VTSPLVFHKSHGACIARQRSAINVVDEQPEGVDIDPSFTLFTTSQCLNEPELHASTSR
+ LQRFSHKYALAVLMANACGSSALWDESGQLIVRADSGSLLLTGLRTTEGWQGDIIPLR
+ "
+ misc_feature complement(1042710..1043291)
+ /locus_tag="SARI_01069"
+ /note="Predicted amidohydrolase [General function
+ prediction only]; Region: COG0388"
+ /db_xref="CDD:223465"
+ misc_feature complement(<1042956..1043282)
+ /locus_tag="SARI_01069"
+ /note="Carbon-nitrogen hydrolase; Region: CN_hydrolase;
+ pfam00795"
+ /db_xref="CDD:216124"
+ gene complement(1043402..1043638)
+ /locus_tag="SARI_01070"
+ CDS complement(1043402..1043638)
+ /locus_tag="SARI_01070"
+ /inference="protein motif:HMMPfam:IPR009052"
+ /inference="similar to AA sequence:INSD:AAO68673.1"
+ /note="'KEGG: spt:SPA0993 4.0e-34 holE; DNA polymerase
+ III, theta subunit K02345;
+ COG: NOG13893 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA polymerase III subunit theta"
+ /protein_id="YP_001570120.1"
+ /db_xref="GI:161503008"
+ /db_xref="InterPro:IPR009052"
+ /translation="MHMKTNLAELEQAEMDKVNVDLAAAGVAFKERYNMPVVADAVER
+ EQPEHLRAWFRERLTAHRLASVSLSRLPYEPKVK"
+ misc_feature complement(1043408..1043632)
+ /locus_tag="SARI_01070"
+ /note="DNA polymerase III subunit theta; Reviewed; Region:
+ PRK10969"
+ /db_xref="CDD:182872"
+ gene 1043770..1044144
+ /locus_tag="SARI_01071"
+ CDS 1043770..1044144
+ /locus_tag="SARI_01071"
+ /inference="protein motif:HMMPfam:IPR007348"
+ /inference="similar to AA sequence:REFSEQ:YP_150280.1"
+ /note="'COG: COG2372 Uncharacterized protein, homolog of
+ Cu resistance protein CopC;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570121.1"
+ /db_xref="GI:161503009"
+ /db_xref="InterPro:IPR007348"
+ /translation="MASSAPSRRLVLLLLAPAFATPAAWAHAHLTHQYPAANAAVTAA
+ PQALTLNFSEGIEPGFSGATITGPQQESIKTRPAKRNEQDNTQLIIPLEQPLKPGAYM
+ VDWHVVSVDGHKTKGKYTFSVK"
+ misc_feature <1043866..1044141
+ /locus_tag="SARI_01071"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10301"
+ /db_xref="CDD:182365"
+ gene 1044145..1045020
+ /locus_tag="SARI_01072"
+ CDS 1044145..1045020
+ /locus_tag="SARI_01072"
+ /inference="protein motif:HMMPfam:IPR008457"
+ /inference="protein motif:HMMPIR:IPR012172"
+ /inference="similar to AA sequence:INSD:CAD05625.1"
+ /note="'COG: COG1276 Putative copper export protein;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570122.1"
+ /db_xref="GI:161503010"
+ /db_xref="InterPro:IPR008457"
+ /db_xref="InterPro:IPR012172"
+ /translation="MILTFVWITLRFIHFTSLMLVYGCALYGAWLAPVSIRRLITCRF
+ LHLQRHAAAWSVISAAFMLAIQGGLMGGGWTDVFSVPVWGAVLQTRFGAVWIWQIILA
+ LVTLAVVVIAPVKMQRRLLILTVAQFILLAGVGHATMRDGVPGTLQQINHALHLLCAA
+ AWFGGLLPVVYCMRMAQGRWRQQAISAMMRFSRYGHFFVAGVLLTGISNTLFITGFTA
+ IWQTAYGQLLLLKCALVVLMVAIALTNRYVLVPRMRQENPRADIWFVRMTQIEWGVGG
+ IVLAIVSLFATLEPF"
+ misc_feature 1044157..1045017
+ /locus_tag="SARI_01072"
+ /note="Putative copper export protein [Inorganic ion
+ transport and metabolism]; Region: PcoD; COG1276"
+ /db_xref="CDD:224195"
+ gene 1045037..1045387
+ /locus_tag="SARI_01073"
+ CDS 1045037..1045387
+ /locus_tag="SARI_01073"
+ /inference="similar to AA sequence:REFSEQ:YP_216865.1"
+ /note="'COG: NOG09766 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570123.1"
+ /db_xref="GI:161503011"
+ /translation="MKKILLPTLLLATSGVAWAAPQVITVSRFEVGKDKWAFNREEVM
+ LTCRPGHALYAINPSTLVQYPLNDIAEQQVAEGKTRAQPIAVIQIDNPAKPGEKMSLA
+ PFIERAEALCEPSK"
+ misc_feature 1045109..1045372
+ /locus_tag="SARI_01073"
+ /note="Protein of unknown function (DUF2511); Region:
+ DUF2511; pfam10709"
+ /db_xref="CDD:192659"
+ gene complement(1045420..1045672)
+ /locus_tag="SARI_01075"
+ misc_RNA complement(1045420..1045672)
+ /locus_tag="SARI_01075"
+ /product="SraC/RyeA RNA"
+ /inference="nucleotide motif:Rfam:RF00101"
+ /note="Rfam score 236.02"
+ gene 1045535..1045634
+ /locus_tag="SARI_01074"
+ misc_RNA 1045535..1045634
+ /locus_tag="SARI_01074"
+ /product="RyeB RNA"
+ /inference="nucleotide motif:Rfam:RF00111"
+ /note="Rfam score 116.28"
+ gene complement(1045892..1046182)
+ /locus_tag="SARI_01076"
+ CDS complement(1045892..1046182)
+ /locus_tag="SARI_01076"
+ /inference="protein motif:Gene3D:IPR013762"
+ /inference="protein motif:superfamily:IPR011010"
+ /inference="similar to AA sequence:REFSEQ:NP_456439.1"
+ /note="'COG: COG0582 Integrase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570124.1"
+ /db_xref="GI:161503012"
+ /db_xref="InterPro:IPR011010"
+ /db_xref="InterPro:IPR013762"
+ /translation="MKSTQFVSWARTYVLPVDFCGELAEKLPTWFPLAMDLALITGQR
+ REDVSCLRFSNIIDDRLYVKQIKTGMKIALPLSLSLPPSACALEQWSIAADL"
+ misc_feature complement(<1045967..1046116)
+ /locus_tag="SARI_01076"
+ /note="DNA breaking-rejoining enzymes, C-terminal
+ catalytic domain. The DNA breaking-rejoining enzyme
+ superfamily includes type IB topoisomerases and tyrosine
+ recombinases that share the same fold in their catalytic
+ domain containing six conserved active site...; Region:
+ DNA_BRE_C; cl00213"
+ /db_xref="CDD:241691"
+ gene complement(1046338..1046463)
+ /locus_tag="SARI_01077"
+ CDS complement(1046338..1046463)
+ /locus_tag="SARI_01077"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570125.1"
+ /db_xref="GI:161503013"
+ /translation="MVKIKLFLIFNANRLKIIDYAEISTSVADRDVDRHNNAGKS"
+ gene complement(1046457..1046603)
+ /locus_tag="SARI_01079"
+ CDS complement(1046457..1046603)
+ /locus_tag="SARI_01079"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570126.1"
+ /db_xref="GI:161503015"
+ /translation="MDKGVDFFGGVFCDAPLIRRQRQDTRFWQAEVATGAGHPIVTSA
+ AIKW"
+ gene 1046490..1046606
+ /locus_tag="SARI_01078"
+ CDS 1046490..1046606
+ /locus_tag="SARI_01078"
+ /inference="protein motif:ScanRegExp:IPR002171"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570127.1"
+ /db_xref="GI:161503014"
+ /db_xref="InterPro:IPR002171"
+ /translation="MASTGCDFSLPESGVLALTPDERGIAENAPEKIDTFIH"
+ gene 1046779..1049136
+ /locus_tag="SARI_01080"
+ CDS 1046779..1049136
+ /locus_tag="SARI_01080"
+ /note="'KEGG: rno:59265 6.8e-09 Phlpp; PH domain and
+ leucine rich repeat protein phosphatase K01090;
+ COG: COG4886 Leucine-rich repeat (LRR) protein;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="E3 ubiquitin-protein ligase SspH2"
+ /protein_id="YP_001570128.2"
+ /db_xref="GI:448236213"
+ /translation="MPFHVGSGCRPAAISNRRIYRIALFDTPPEMSSWEKSKEFFCST
+ HQTAALECIWTICHPPAGTTREDVASRFEQLRTLAYAGWEENIHSGLHGENYFCILDE
+ DSQEILSVTLDNAGNYTVNCQGYSETHHLTMATEPGVERTEHAEGASGTFCLPATTAP
+ QTAAEYDAVWSAWQRAAPEGEARGRAAVVREMRNCLKNGNPVLNVGESGLTTLPDHLP
+ PHITTLVIPDNNLTSLPALPAGLQELIVAGNQLPSLPALPLGLRELSIYGNPLTSLPA
+ LPSGLCKLSAFGNQLTSLPALPQGLRELSVSDNQLASLPALPSGLCKLWAYNNRLPSL
+ PALPTGLQELSVSDNLLPSLPALPSGLCKLWATNNRLTSLSALPPGLRELIVSGNLLT
+ SLPALPPGLEELAVSANRLSSLPALPPGLQTLWATNNRLTRLPESITGLSSEATVHLE
+ GNSLSERTLRTLRNLTSAPGYSGPRIRFDMAGPSVPREARALHLAVADWLMPAREGEP
+ DPADRWHASGQEDNAAAFSLFLDRLSETENFEKDAGFKAQISSWLALLAEDDVLRAKT
+ FAMATEATSSCEDRVTFALHQMKNVQLVHNAEKGVYDNNLPGLVSTGREMFRMEMLER
+ IALEKVRTLAFVDEIEVCLAYQNKLKESLELTSVTAEMRFFGASGVTASDLRSAERQV
+ KAAENSEFSEWLLQWGPLHSVLERKEPERFNALREKQISDYEHTYQMLSDTELKPSGL
+ VGNTDAERTIGVRAMASAKKEFLNGLRPLVEEMLGSYLKARWRLN"
+ misc_feature 1046779..1049133
+ /locus_tag="SARI_01080"
+ /note="E3 ubiquitin-protein ligase SspH2; Provisional;
+ Region: PRK15387"
+ /db_xref="CDD:185285"
+ misc_feature 1046869..>1047207
+ /locus_tag="SARI_01080"
+ /note="pathogenicity island 2 effector protein SseI;
+ Provisional; Region: PRK15372"
+ /db_xref="CDD:185270"
+ misc_feature 1047211..>1047300
+ /locus_tag="SARI_01080"
+ /note="Type III secretion system leucine rich repeat
+ protein; Region: TTSSLRR; pfam12468"
+ /db_xref="CDD:204932"
+ gene complement(1049573..1049671)
+ /locus_tag="SARI_01081"
+ CDS complement(1049573..1049671)
+ /locus_tag="SARI_01081"
+ /inference="protein motif:HMMPfam:IPR010391"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570129.1"
+ /db_xref="GI:161503017"
+ /db_xref="InterPro:IPR010391"
+ /translation="MNDLNSDVSKSARETLNRILEEIFEETDTWLV"
+ misc_feature complement(1049576..>1049671)
+ /locus_tag="SARI_01081"
+ /note="DinI-like family; Region: DinI; cl11630"
+ /db_xref="CDD:187111"
+ gene 1049900..1050067
+ /locus_tag="SARI_01082"
+ CDS 1049900..1050067
+ /locus_tag="SARI_01082"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570130.1"
+ /db_xref="GI:161503018"
+ /translation="MINKIIDKEVEGMEFNELSSDLAQLEVLSQQRVGGIVRRQKHIA
+ LLHKLQTELIV"
+ gene complement(1050234..1051232)
+ /locus_tag="SARI_01084"
+ CDS complement(1050234..1051232)
+ /locus_tag="SARI_01084"
+ /inference="similar to AA sequence:REFSEQ:YP_216568.1"
+ /note="'COG: NOG25496 non supervised orthologous group;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570131.1"
+ /db_xref="GI:161503020"
+ /translation="MRINSAQTYARAFTANTQLHEAAGNYENKLATKITKGIVGVLTL
+ GIGYGLIRLIENCYNVRNKINDYCANAENIYNGIAVAIATGNNVAEIKLKDNTVLTLM
+ QIDHEHISESFVRISDGQYTEEIPGTFNDICMKLGQEFNNAPGLYNISSQYQPLDSIL
+ QMRACTIEPVINFSPVTGQYENLYGNNICNIHNALCKAILMETPEAKVTLIGGSGIEL
+ SFSQESDDEQKKTQISNGLQVMEVDGTFTDLCREYELLLYAKDQNIDFTTLDERLAEV
+ KANKNSAGAIPGLDEFTLTARCMADAKEGHLAEATQRFNAAYGESAPPSRPPLRFK"
+ gene 1051222..1051353
+ /locus_tag="SARI_01083"
+ CDS 1051222..1051353
+ /locus_tag="SARI_01083"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570132.1"
+ /db_xref="GI:161503019"
+ /translation="MMRIGTLTFIYIIRLLQLSLQNYGLIMSERKPVNFQITLSEFF"
+ gene complement(1051375..1051851)
+ /locus_tag="SARI_01085"
+ CDS complement(1051375..1051851)
+ /locus_tag="SARI_01085"
+ /inference="similar to AA sequence:REFSEQ:YP_216841.1"
+ /note="'COG: NOG23759 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570133.1"
+ /db_xref="GI:161503021"
+ /translation="MSKDEISYQILYRYYLEKLHSTFTRRVDNVLSFALVFLGVGVVV
+ NIGSSLILGLCIVCISALKMVFRFDTRSTQADKQSRAWLKLFYSRHRFPSDKALFLTI
+ TSLEQDKSEVWSMLIGPAIVMTKTALGKTPIEKLTTGEKLCIFLSGATKPQPSDHC"
+ gene 1052363..1053085
+ /locus_tag="SARI_01086"
+ CDS 1052363..1053085
+ /locus_tag="SARI_01086"
+ /inference="protein motif:FPrintScan:IPR005414"
+ /inference="protein motif:HMMPfam:IPR005414"
+ /inference="similar to AA sequence:INSD:AAL20770.1"
+ /note="'COG: NOG18552 non supervised orthologous group;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570134.1"
+ /db_xref="GI:161503022"
+ /db_xref="InterPro:IPR005414"
+ /translation="MTKINLSPQFYRIHRSDVEPVKETTTEKGVFAKSITAVRNSFIS
+ LSTSLSERFSLHKQTDTPATHFHRGNASEGRAVLTNKIVKDFMLQKLNSLDIKGNASK
+ DPDYARQTCEAMLSSVYSNNKDQCCKLLVSKGISITPFLKEIGEAAQNAGLPGEIKNG
+ IFTPGGAGTNPFVVPLIASASVEYPHMFINYSQQVSFKAYAEKIIMKEVTPLFNEGTM
+ PTPQQFQLTVENIANKYLQNAS"
+ misc_feature 1052363..1053082
+ /locus_tag="SARI_01086"
+ /note="type III secretion protein SopE2; Provisional;
+ Region: PRK15280"
+ /db_xref="CDD:185182"
+ misc_feature 1052366..1052587
+ /locus_tag="SARI_01086"
+ /note="Salmonella type III secretion SopE effector
+ N-terminus; Region: SecIII_SopE_N; pfam05364"
+ /db_xref="CDD:114106"
+ misc_feature 1052588..1053082
+ /locus_tag="SARI_01086"
+ /note="SopE GEF domain; Region: SopE_GEF; pfam07487"
+ /db_xref="CDD:203646"
+ gene 1053489..1053626
+ /locus_tag="SARI_01087"
+ CDS 1053489..1053626
+ /locus_tag="SARI_01087"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570135.1"
+ /db_xref="GI:161503023"
+ /translation="MWCCYVVYVPGMFLRRENIECEQAILINSQRQGITPPGAVSYIL
+ F"
+ gene 1053736..1054404
+ /gene="pphA"
+ /locus_tag="SARI_01088"
+ CDS 1053736..1054404
+ /gene="pphA"
+ /locus_tag="SARI_01088"
+ /inference="protein motif:HMMPfam:IPR004843"
+ /inference="protein motif:ScanRegExp:IPR006186"
+ /inference="similar to AA sequence:INSD:AAL09831.1"
+ /note="Plays a key role in signaling protein misfolding
+ via the cpxR/cpxA transducing system; modulates the
+ phosphorylated status of many phosphoproteins"
+ /codon_start=1
+ /transl_table=11
+ /product="serine/threonine protein phosphatase 1"
+ /protein_id="YP_001570136.1"
+ /db_xref="GI:161503024"
+ /db_xref="InterPro:IPR004843"
+ /db_xref="InterPro:IPR006186"
+ /translation="MNDRKNMMRPEEIYQRIEGKDWRHIWVVGDIHGCFSILMKKLRE
+ YQFDPQQDLLVSVGDIIDRGPDSLRSLALLRESWMRAVRGNHEQMALDARTSSQSTLW
+ FMNGGDWFTRLTAEQTVQAEMLFTLCQRLPWILEIRCRHNTHVIAHADYPSPIYQWQK
+ KVDLHQVLWSRERLMNKSGGITGADHFWFGHTPLRRRMDFDNVHYIDTGAVFGGQLTL
+ AQIQ"
+ misc_feature 1053754..1054401
+ /gene="pphA"
+ /locus_tag="SARI_01088"
+ /note="serine/threonine protein phosphatase 1;
+ Provisional; Region: pphA; PRK11439"
+ /db_xref="CDD:236911"
+ misc_feature 1053805..1054311
+ /gene="pphA"
+ /locus_tag="SARI_01088"
+ /note="Calcineurin-like phosphoesterase; Region:
+ Metallophos; pfam00149"
+ /db_xref="CDD:215750"
+ gene complement(1054433..1054624)
+ /locus_tag="SARI_01089"
+ CDS complement(1054433..1054624)
+ /locus_tag="SARI_01089"
+ /inference="protein motif:HMMPfam:IPR009954"
+ /inference="similar to AA sequence:INSD:AAV76993.1"
+ /note="'COG: NOG12164 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570137.1"
+ /db_xref="GI:161503025"
+ /db_xref="InterPro:IPR009954"
+ /translation="MFALVLFVCYLDGGCEDIVVDIYDTEQQCLYSMGDQRIRHGGCF
+ PVEDFIDGFWRPAQQYSDF"
+ misc_feature complement(1054451..1054624)
+ /locus_tag="SARI_01089"
+ /note="Protein of unknown function (DUF1482); Region:
+ DUF1482; pfam07358"
+ /db_xref="CDD:148777"
+ gene complement(1054735..1054974)
+ /locus_tag="SARI_01090"
+ CDS complement(1054735..1054974)
+ /locus_tag="SARI_01090"
+ /inference="protein motif:HMMPfam:IPR009950"
+ /inference="similar to AA sequence:INSD:CAD05533.1"
+ /note="'COG: NOG13883 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570138.1"
+ /db_xref="GI:161503026"
+ /db_xref="InterPro:IPR009950"
+ /translation="MMKTSVRIGAFEIDDAELHGESPGERTLTIPCKSDPDLCMQLDA
+ WDAETSVPAILNGEHSVLFRNHYDPKSDAWVMRLA"
+ misc_feature complement(1054738..1054974)
+ /locus_tag="SARI_01090"
+ /note="Protein of unknown function (DUF1480); Region:
+ DUF1480; pfam07351"
+ /db_xref="CDD:148771"
+ gene complement(1055089..1056630)
+ /gene="yebU"
+ /locus_tag="SARI_01091"
+ CDS complement(1055089..1056630)
+ /gene="yebU"
+ /locus_tag="SARI_01091"
+ /inference="protein motif:BlastProDom:IPR006174"
+ /inference="protein motif:HMMPfam:IPR001678"
+ /inference="protein motif:HMMTigr:IPR011023"
+ /inference="protein motif:ScanRegExp:IPR001678"
+ /inference="similar to AA sequence:REFSEQ:YP_216833.1"
+ /note="in Escherichia coli this enzyme specifically
+ methylates C1407 of the 16S rRNA"
+ /codon_start=1
+ /transl_table=11
+ /product="rRNA (cytosine-C(5)-)-methyltransferase RsmF"
+ /protein_id="YP_001570139.1"
+ /db_xref="GI:161503027"
+ /db_xref="InterPro:IPR001678"
+ /db_xref="InterPro:IPR006174"
+ /db_xref="InterPro:IPR011023"
+ /translation="MGHRVATLNARLRRTRAGAFYATLRACFFAGDTPVAQHSVYFPD
+ AFLAQMREAMPSTLSFDEFIAACQRPLRRSIRINTLKISVADFLALTAPYGWLLTPIP
+ WCDEGFWIERDDEDALPLGSTAEHLSGLFYIQEASSMLPVAALFADDNHPQRVMDMAA
+ APGSKTTQIAARMGNHGAILANEFSASRVKILHANLCRCGVANTALTHFDGRVFGAAL
+ PEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNLDIAATQRELLESAFHALRPGGTL
+ VYSTCTLNRQENEAVCLWLKETYTDAVEFLPLNDLFPDADRALTPEGFLHVFPQIYDC
+ EGFFVARLRKISSLPALPAPTYKVGNFPFIPLKGHEALHITQAASAVGLLWDENLHLW
+ QREKEVWLFPAAIESLIGKVRFSRLGIKLAESHNKGYRWQHEATVALACPNHAHALEL
+ SPQEAEEWYRGRDIYPQTIPAVDDVLVTFQHQPLGLAKRIGSRIKNSYPRELVRDGKL
+ FTSNV"
+ misc_feature complement(1055107..1056516)
+ /gene="yebU"
+ /locus_tag="SARI_01091"
+ /note="rRNA (cytosine-C(5)-)-methyltransferase RsmF;
+ Reviewed; Region: yebU; PRK11933"
+ /db_xref="CDD:183387"
+ misc_feature complement(1055599..1056408)
+ /gene="yebU"
+ /locus_tag="SARI_01091"
+ /note="NOL1/NOP2/sun family putative RNA methylase;
+ Region: nop2p; TIGR00446"
+ /db_xref="CDD:188051"
+ misc_feature complement(1055125..1055439)
+ /gene="yebU"
+ /locus_tag="SARI_01091"
+ /note="pre-rRNA processing and ribosome biogenesis;
+ Region: Nol1_Nop2_Fmu_2; pfam13636"
+ /db_xref="CDD:222276"
+ gene complement(1056606..1059239)
+ /locus_tag="SARI_01092"
+ CDS complement(1056606..1059239)
+ /locus_tag="SARI_01092"
+ /inference="protein motif:HMMPfam:IPR003399"
+ /note="'COG: COG3008 Paraquat-inducible protein B;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570140.1"
+ /db_xref="GI:161503028"
+ /db_xref="InterPro:IPR003399"
+ /translation="MSQETPASKTEAQIKTKRRISPFWLLPLIALMIAGWLVWDSYQD
+ RGNSVTIDFMSADGIVPGRTPVRYQGVEVGTVEDVSLSKDLRKIEVRVSIKSDMEDAL
+ REETQFWLVTPKASLAGVSGLDALVGGNYIGMMPGKGKPRDHFVALDTQPKYRLSNGD
+ LMIHLHAPDLGSLNSGSLVYFRKIPVGRVYDYSINPNKQGVTIDVLIERRFTDLVKKG
+ SRFWNVSGVDADLSLSGAKVKLESLAALVNGAIAFDSPDNSKPAAQDDTFGLYKDLAH
+ SQRGVIVKLELPSGDGLKAESTPLMYQGLEVGELSKLTLNPGGNVTGEMTVDPSVVPL
+ MRENTRIELRNPKLSLSDANISSLLTGKTFELVPGDGEPRSEFVVVPGEEALLHEANA
+ LTLTLTAPESYGIEPGQPLILHGVKVGQVIERNLSSKGVSFTVAIEPQHRDLVQGDSK
+ FVVNSRVDVKVGLDGVEFLGASASEWIDGGIRILPGTGGKMKSTYPLYANLEKALENS
+ LSDLPTTTLTLTAETLPDIQAGSVVLYRKFEVGEVITVRPRANSFDIDLHIKPEYRHL
+ LTSNSVFWAEGGAKVQLNGSGLTVQASPLSRALKGAISFDNLSGASASRRKGDKRILY
+ ASETSARAVGGQITLHAFDAGKLAEGMPIRYLGIDIGQIQTLELITARNEVQAKAVLY
+ PEYVQTFARAGTRFSVITPQISAAGVEHLDTILQPYINVEPGRGAARRDFELQEATIT
+ DSRYLDGLSIVVEAPEAGSLNIGTPVLFRGIEVGTVTGMSLGSLSDRVMITLRISKRY
+ QHLVRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGIAFATPPSTPLAPKAQAGK
+ HFLLQESEPKEWREWGTALPR"
+ misc_feature complement(1057536..1059239)
+ /locus_tag="SARI_01092"
+ /note="Paraquat-inducible protein B [General function
+ prediction only]; Region: PqiB; COG3008"
+ /db_xref="CDD:225553"
+ misc_feature complement(1058829..1059107)
+ /locus_tag="SARI_01092"
+ /note="mce related protein; Region: MCE; pfam02470"
+ /db_xref="CDD:217055"
+ misc_feature complement(<1058577..1058753)
+ /locus_tag="SARI_01092"
+ /note="mce related protein; Region: MCE; pfam02470"
+ /db_xref="CDD:217055"
+ misc_feature complement(1058133..1058405)
+ /locus_tag="SARI_01092"
+ /note="mce related protein; Region: MCE; pfam02470"
+ /db_xref="CDD:217055"
+ misc_feature complement(1057875..1058069)
+ /locus_tag="SARI_01092"
+ /note="mce related protein; Region: MCE; pfam02470"
+ /db_xref="CDD:217055"
+ misc_feature complement(1057068..1057340)
+ /locus_tag="SARI_01092"
+ /note="mce related protein; Region: MCE; pfam02470"
+ /db_xref="CDD:217055"
+ misc_feature complement(1056771..1057004)
+ /locus_tag="SARI_01092"
+ /note="mce related protein; Region: MCE; pfam02470"
+ /db_xref="CDD:217055"
+ gene complement(1059208..1060491)
+ /locus_tag="SARI_01093"
+ CDS complement(1059208..1060491)
+ /locus_tag="SARI_01093"
+ /inference="protein motif:HMMPfam:IPR007498"
+ /inference="protein motif:HMMTigr:IPR005219"
+ /inference="similar to AA sequence:INSD:AAL20763.1"
+ /note="'COG: COG2995 Uncharacterized paraquat-inducible
+ protein A;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570141.2"
+ /db_xref="GI:448236214"
+ /db_xref="InterPro:IPR005219"
+ /db_xref="InterPro:IPR007498"
+ /translation="MALNTSHVTPTKKLTIWSISEALPRSHYQRCPECDMLFSLPEIS
+ AHQSAYCPRCQAKIRDGRDWSLTRLIAMAVTMLLLMPFAWSEPLLHIYLLGVRIDANV
+ MHGIWQMTQQGDPLTAAMVLFCVVGAPLILVFSIAYLWFGSLLGMNLRPVLLMLEKLK
+ EWVMLDIYLVGIGVASIKVQDYAFLQPGIGLLAFVSLVVLSILTMIHLNVEQLWDRFY
+ PQRPAQHADERLRVCLGCHFSGYPDAKGRCPRCHIPLRLRRKQSVQKCWAALLASIVF
+ LLPANLLPISVIYINGGRQEDTILSGIMSLASSNIAVAAVVFIASILVPFTKVIVMFT
+ LLLSIHFKCEQGLRTRILLLRLVTWIGRWSMLDLFVISLTMSLINRDQILAFTMGPAA
+ FYFGAAVILTILAVEWLDSRLLWDTHESGNARFED"
+ misc_feature complement(1059211..1060440)
+ /locus_tag="SARI_01093"
+ /note="Uncharacterized paraquat-inducible protein A
+ [Function unknown]; Region: PqiA; COG2995"
+ /db_xref="CDD:225542"
+ misc_feature complement(1059829..1060299)
+ /locus_tag="SARI_01093"
+ /note="Paraquat-inducible protein A; Region: PqiA;
+ pfam04403"
+ /db_xref="CDD:218068"
+ misc_feature complement(1059226..1059708)
+ /locus_tag="SARI_01093"
+ /note="Paraquat-inducible protein A; Region: PqiA;
+ pfam04403"
+ /db_xref="CDD:218068"
+ gene 1060533..1061117
+ /locus_tag="SARI_01094"
+ CDS 1060533..1061117
+ /locus_tag="SARI_01094"
+ /inference="protein motif:HMMPfam:IPR003018"
+ /inference="protein motif:HMMSmart:IPR003018"
+ /inference="similar to AA sequence:INSD:AAL20762.1"
+ /note="'KEGG: gbe:GbCGDNIH1_0602 0.0028
+ phosphoenolpyruvate-protein phosphotransferase;
+ COG: COG1956 GAF domain-containing protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570142.1"
+ /db_xref="GI:161503030"
+ /db_xref="InterPro:IPR003018"
+ /translation="MIGITLSKNAFNAYFNSLCLGVRPQSDYIMSETELYAALNRDFQ
+ SLMAGETSFLATLANTSALLFERLTEVNWAGFYLLEGDTLVLGPFQGKIACVRIPVGR
+ GVCGAAVAQNKVQRIDDVHAFDGHIACDAASNAEIVLPVAVGKKIIGVLDIDSTAFGR
+ FTEEDEHGLRTLVAQLETVLATTDYKKFFASVAG"
+ misc_feature 1060593..1061081
+ /locus_tag="SARI_01094"
+ /note="GAF domain-containing protein [Signal transduction
+ mechanisms]; Region: COG1956"
+ /db_xref="CDD:224867"
+ misc_feature <1060863..1061075
+ /locus_tag="SARI_01094"
+ /note="GAF domain; Region: GAF_2; pfam13185"
+ /db_xref="CDD:221964"
+ gene 1061215..1061901
+ /locus_tag="SARI_01095"
+ CDS 1061215..1061901
+ /locus_tag="SARI_01095"
+ /inference="protein motif:HMMPfam:IPR007447"
+ /inference="similar to AA sequence:INSD:CAD05528.1"
+ /note="affects solute and DNA transport through an unknown
+ mechanism"
+ /codon_start=1
+ /transl_table=11
+ /product="putative solute/DNA competence effector"
+ /protein_id="YP_001570143.1"
+ /db_xref="GI:161503031"
+ /db_xref="InterPro:IPR007447"
+ /translation="MENQPKLNSSKEVIAFLAERFPRCFSAEGEARPLKIGIFQDLVE
+ RVGGEMNLSKTQLRSALRLYTSSWRYLYGVKPGATRVDLDGNPCGELEEQHVEHARKQ
+ LEEAKARVQAQRAEQQAKKREAAAAAGEKEDAPRRERKPRPVARRKEGAERKPRADKQ
+ TSKALRAPREEKHTPVSDISVLTVGQSLKVKAGNNAMDATVLEITKDGVRVQLNSGMS
+ LIVRAEHLVF"
+ misc_feature 1061215..1061898
+ /locus_tag="SARI_01095"
+ /note="ProP expression regulator; Provisional; Region:
+ PRK04950"
+ /db_xref="CDD:235322"
+ misc_feature 1061227..1061523
+ /locus_tag="SARI_01095"
+ /note="ProQ/FINO family; Region: ProQ; pfam04352"
+ /db_xref="CDD:218040"
+ gene 1061921..1063969
+ /locus_tag="SARI_01096"
+ CDS 1061921..1063969
+ /locus_tag="SARI_01096"
+ /inference="protein motif:HMMPfam:IPR001478"
+ /inference="protein motif:HMMPfam:IPR005151"
+ /inference="protein motif:HMMSmart:IPR001478"
+ /inference="protein motif:HMMSmart:IPR005151"
+ /inference="protein motif:HMMTigr:IPR004447"
+ /inference="protein motif:superfamily:IPR001478"
+ /note="Involved in the cleavage of a C-terminal peptide of
+ 11 residues from the precursor form of penicillin-binding
+ protein 3"
+ /codon_start=1
+ /transl_table=11
+ /product="carboxy-terminal protease"
+ /protein_id="YP_001570144.1"
+ /db_xref="GI:161503032"
+ /db_xref="InterPro:IPR001478"
+ /db_xref="InterPro:IPR004447"
+ /db_xref="InterPro:IPR005151"
+ /translation="MNTFFRLTALAGLLALAGQSFAVEDITRADQIPVLKEETQHATV
+ SERVTSRFTRSHYRQFDLDQAFSAKIFDRYLNLLDYSHNVLLASDVEQFAKKKTVLGD
+ ELRTGKLDVFYDLYNLAQKRRFERYQYALKVLERPMDFTGNDTFNLDRSKAPWPKDEA
+ ELNALWDGKVKFDELSLKLTGKSDKEIRETLMRRYKFAIRRLAQTNSEDVFSLAMTAF
+ AREIDPHTNYLSPRNTEQFNTEMSLSLEGIGAVLQMDDDYTVINSLVAGGPAAKSKSI
+ SVGDRIVGVGQTGKPMVDVIGWRLDDVVALIKGPKGSKVRLEILPAGKGMKTRIVTLT
+ RERIRLEDRAVKMSVKTVGKEKVGVLDIPGFYVGLTDDVKVQLQKLEKQNVNSIVIDL
+ RSNGGGALTEAVSLSGLFIPSGPIVQVRDNNGKVREDSDTDGVVYYKGPLVVLVDRFS
+ ASASEIFAAAMQDYGRALIVGEPTFGKGTVQQYRSLNRIYDQMLRPEWPALGSVQYTI
+ QKFYRVNGGSTQRKGVTPDIIMPTGNEETETGEKYEDNALPWDSISAAKYTKSGDLTQ
+ FGPELLKEHNVRIAKDPEFQYIMKDIAHFNAIKGKRNIVSLNYAQREKENNEEDAMRL
+ ARINDRFKREGKPLLKKLDDLPKDYQEPDPYLDETVKIALDLAHLEQEKPAEQAAAGK
+ "
+ misc_feature 1061927..1063942
+ /locus_tag="SARI_01096"
+ /note="carboxy-terminal protease; Provisional; Region:
+ PRK11186"
+ /db_xref="CDD:236873"
+ misc_feature 1062653..1062931
+ /locus_tag="SARI_01096"
+ /note="PDZ domain of C-terminal processing-,
+ tail-specific-, and tricorn proteases, which function in
+ posttranslational protein processing, maturation, and
+ disassembly or degradation, in Bacteria, Archaea, and
+ plant chloroplasts. May be responsible for...; Region:
+ PDZ_CTP_protease; cd00988"
+ /db_xref="CDD:238488"
+ misc_feature order(1062659..1062670,1062674..1062676,1062827..1062832,
+ 1062839..1062844)
+ /locus_tag="SARI_01096"
+ /note="protein binding site [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238488"
+ misc_feature <1062986..1063513
+ /locus_tag="SARI_01096"
+ /note="C-terminal processing peptidase; serine protease
+ family S41; Region: Peptidase_S41_CPP; cd07560"
+ /db_xref="CDD:143476"
+ misc_feature order(1063274..1063276,1063349..1063351)
+ /locus_tag="SARI_01096"
+ /note="Catalytic dyad [active]"
+ /db_xref="CDD:143476"
+ misc_feature 1063529..1063933
+ /locus_tag="SARI_01096"
+ /note="C-terminal domain of tail specific protease
+ (DUF3340); Region: DUF3340; pfam11818"
+ /db_xref="CDD:221244"
+ unsure 1062876..1063390
+ /locus_tag="SARI_01096"
+ /note="Sequence derived from one plasmid subclone"
+ gene 1064162..1065043
+ /locus_tag="SARI_01097"
+ CDS 1064162..1065043
+ /locus_tag="SARI_01097"
+ /inference="protein motif:HMMPfam:IPR001915"
+ /inference="protein motif:HMMPfam:IPR009481"
+ /inference="similar to AA sequence:INSD:AAV77000.1"
+ /note="putative metalloprotease"
+ /codon_start=1
+ /transl_table=11
+ /product="heat shock protein HtpX"
+ /protein_id="YP_001570145.1"
+ /db_xref="GI:161503033"
+ /db_xref="InterPro:IPR001915"
+ /db_xref="InterPro:IPR009481"
+ /translation="MMRIALFLLTNLAVMVVFGLVLSLTGIQSSSVQGLLIMALLFGF
+ GGSFISLLMSKWMALKSVGGEVIEQPRNERERWLMNTVATQARQAGIAMPQVAIYHAP
+ DINAFATGARRDASLVAVSTGLLQNMSPDEAEAVIAHEISHIANGDMVTMTLIQGVVN
+ TFVIFISRIIAQIAAGFLGGNRDEGEGSNGNPLIYFAVATVLELVFGILASIITMWFS
+ RYREFHADAGSAKLVGREKMIAALQRLKTSYEPQEATSMMAFCINGKSKSLSELFMTH
+ PPLDKRIEALRSGEYLK"
+ misc_feature 1064162..1065031
+ /locus_tag="SARI_01097"
+ /note="heat shock protein HtpX; Provisional; Region:
+ PRK05457"
+ /db_xref="CDD:235478"
+ gene complement(1065091..1066464)
+ /locus_tag="SARI_01098"
+ CDS complement(1065091..1066464)
+ /locus_tag="SARI_01098"
+ /inference="protein motif:FPrintScan:IPR001411"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="similar to AA sequence:REFSEQ:YP_216826.1"
+ /note="'KEGG: sgl:SG1466 4.6e-07 deTHIobiotin synthase
+ K01935;
+ COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570146.1"
+ /db_xref="GI:161503034"
+ /db_xref="InterPro:IPR001411"
+ /db_xref="InterPro:IPR011701"
+ /translation="MEKKQADGLPLPQRYGAILTIIIGISMAVLDSAIANVALPTIAS
+ DLHASPASSIWIVNAYQIAIVVSLLSLSFLGDMFGYRQVYKCGLVVFLLSSLFCALSD
+ SLQMLTLARIAQGFGGAALMSVNTALIRLIYPQRHLGRGMGINSFTVAVSSAAGPTIA
+ AAILSISSWKWLFLINVPLGIIALILAIRFLPANIAHDAKPRFDLPSAVMNALTFGLL
+ ITALGGFAQGQSLTLIGAELLVLFVVGFFFVHRQLSLPVPLLPIDLLRIPLFSLSIGT
+ SICSFCAQMLAMVSLPFYLQTVLGRSEVETGLLLTPWPLATMVMAPLAGYLIDRFHAG
+ LLGALGMVIMAAGLFALIMLPASPSDLNIIWPMLLCGAGFGLFQSPNNHTIMTSAPRE
+ RSGGASGMLGTARLLGQSTGAALVALMLNQSGDSGTHLSLVAAGGLATLAAVVSGLRI
+ TQPHAQA"
+ misc_feature complement(<1065877..1066413)
+ /locus_tag="SARI_01098"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature complement(1065226..1066404)
+ /locus_tag="SARI_01098"
+ /note="Major Facilitator Superfamily; Region: MFS_1;
+ pfam07690"
+ /db_xref="CDD:219516"
+ misc_feature complement(order(1066006..1066008,1066024..1066029,
+ 1066036..1066041,1066075..1066077,1066084..1066089,
+ 1066096..1066101,1066108..1066113,1066249..1066254,
+ 1066258..1066263,1066273..1066275,1066282..1066287,
+ 1066294..1066296,1066345..1066350,1066354..1066362,
+ 1066369..1066371))
+ /locus_tag="SARI_01098"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ misc_feature complement(1065193..>1065657)
+ /locus_tag="SARI_01098"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ gene 1066640..1067431
+ /locus_tag="SARI_01099"
+ CDS 1066640..1067431
+ /locus_tag="SARI_01099"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR005471"
+ /inference="protein motif:HMMSmart:IPR005471"
+ /inference="similar to AA sequence:INSD:CAD05524.1"
+ /note="'COG: COG1414 Transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570147.1"
+ /db_xref="GI:161503035"
+ /db_xref="InterPro:IPR005471"
+ /db_xref="InterPro:IPR011991"
+ /translation="MVNADLDKRPDSVSSVLKVFGILQALGEERETGITELSQRVMMS
+ KSTVYRFLQTMKTLGYVAQEGESEKYSLTLKLFELGARALQNVDLIRSADIQMRELSR
+ LTKETIHLGALDEDSIVYIHKIDSMYNLRMYSRIGRRNPLYSTAIGKVLLAWRDRDEV
+ KQILDGVEYKQSTGRTITSTEALLPLLDKVRAQGYGEDNEEQEEGLRCIGVPVFDRFG
+ VVIAGLSISFPTLRFSEERLQEYVAMLHTAARKISEQMGYNDYPF"
+ misc_feature 1066649..1067419
+ /locus_tag="SARI_01099"
+ /note="DNA-binding transcriptional regulator KdgR;
+ Provisional; Region: PRK15090"
+ /db_xref="CDD:185046"
+ misc_feature 1066703..1066903
+ /locus_tag="SARI_01099"
+ /note="Arsenical Resistance Operon Repressor and similar
+ prokaryotic, metal regulated homodimeric repressors. ARSR
+ subfamily of helix-turn-helix bacterial transcription
+ regulatory proteins (winged helix topology). Includes
+ several proteins that appear to...; Region: HTH_ARSR;
+ cd00090"
+ /db_xref="CDD:238042"
+ misc_feature order(1066709..1066714,1066724..1066726,1066814..1066816,
+ 1066874..1066879,1066883..1066891,1066895..1066903)
+ /locus_tag="SARI_01099"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238042"
+ misc_feature order(1066736..1066738,1066745..1066747,1066874..1066876)
+ /locus_tag="SARI_01099"
+ /note="putative Zn2+ binding site [ion binding]; other
+ site"
+ /db_xref="CDD:238042"
+ misc_feature order(1066736..1066744,1066769..1066780,1066784..1066789,
+ 1066796..1066801,1066805..1066810,1066826..1066834,
+ 1066847..1066855)
+ /locus_tag="SARI_01099"
+ /note="putative DNA binding site [nucleotide binding];
+ other site"
+ /db_xref="CDD:238042"
+ misc_feature 1067021..1067398
+ /locus_tag="SARI_01099"
+ /note="Bacterial transcriptional regulator; Region: IclR;
+ pfam01614"
+ /db_xref="CDD:201890"
+ gene complement(1067641..1067880)
+ /locus_tag="SARI_01100"
+ CDS complement(1067641..1067880)
+ /locus_tag="SARI_01100"
+ /inference="similar to AA sequence:REFSEQ:NP_804854.1"
+ /note="'COG: NOG13884 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570148.1"
+ /db_xref="GI:161503036"
+ /translation="MRLIIRAIVLFALVWIGLLLSGYGVLVGSKVNAAGLGLQCHYLT
+ ARGTSTAQYVHTNSGIIGFSECPIFRKSATVVDNS"
+ misc_feature complement(1067668..1067877)
+ /locus_tag="SARI_01100"
+ /note="YobH-like protein; Region: YobH; pfam13996"
+ /db_xref="CDD:206166"
+ gene 1068038..1068181
+ /locus_tag="SARI_01101"
+ CDS 1068038..1068181
+ /locus_tag="SARI_01101"
+ /inference="similar to AA sequence:INSD:AAL20755.1"
+ /note="'COG: NOG18120 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570149.1"
+ /db_xref="GI:161503037"
+ /translation="MKKFRWVVLGIVVVVCLLLWAQVFNIMCDQDVQFFSGICAINKF
+ IPW"
+ misc_feature 1068038..1068178
+ /locus_tag="SARI_01101"
+ /note="PhoPQ regulatory protein; Provisional; Region:
+ PRK10299"
+ /db_xref="CDD:182364"
+ gene 1068306..1068539
+ /locus_tag="SARI_01102"
+ CDS 1068306..1068539
+ /locus_tag="SARI_01102"
+ /inference="similar to AA sequence:INSD:AAO68705.1"
+ /note="'COG: NOG11327 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570150.1"
+ /db_xref="GI:161503038"
+ /translation="MAVLVVGLTLWFFVNRASSRANEQIELLEALLNQQKRQNALLRR
+ LCEANEPEKEAEPATAASEQRKDEDIIRLVAER"
+ misc_feature 1068306..1068536
+ /locus_tag="SARI_01102"
+ /note="YebO-like protein; Region: YebO; pfam13974"
+ /db_xref="CDD:222484"
+ gene 1069345..1069554
+ /locus_tag="SARI_01103"
+ CDS 1069345..1069554
+ /locus_tag="SARI_01103"
+ /inference="protein motif:BlastProDom:IPR002059"
+ /inference="protein motif:Gene3D:IPR012340"
+ /inference="protein motif:HMMPfam:IPR002059"
+ /inference="protein motif:HMMPIR:IPR012156"
+ /inference="protein motif:HMMSmart:IPR011129"
+ /inference="protein motif:ScanRegExp:IPR002059"
+ /inference="protein motif:superfamily:IPR008994"
+ /inference="similar to AA sequence:INSD:ABP61062.1"
+ /note="'COG: COG1278 Cold shock proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="cold shock-like protein CspC"
+ /protein_id="YP_001570151.1"
+ /db_xref="GI:161503039"
+ /db_xref="InterPro:IPR002059"
+ /db_xref="InterPro:IPR008994"
+ /db_xref="InterPro:IPR011129"
+ /db_xref="InterPro:IPR012156"
+ /db_xref="InterPro:IPR012340"
+ /translation="MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTL
+ AEGQNVEFEIQDGQKGPAAVNVTAI"
+ misc_feature 1069354..1069545
+ /locus_tag="SARI_01103"
+ /note="Cold-Shock Protein (CSP) contains an S1-like
+ cold-shock domain (CSD) that is found in eukaryotes,
+ prokaryotes, and archaea. CSP's include the major
+ cold-shock proteins CspA and CspB in bacteria and the
+ eukaryotic gene regulatory factor Y-box...; Region:
+ CSP_CDS; cd04458"
+ /db_xref="CDD:239905"
+ misc_feature order(1069372..1069374,1069399..1069401,1069432..1069434,
+ 1069519..1069521)
+ /locus_tag="SARI_01103"
+ /note="DNA-binding site [nucleotide binding]; DNA binding
+ site"
+ /db_xref="CDD:239905"
+ misc_feature order(1069390..1069410,1069429..1069440)
+ /locus_tag="SARI_01103"
+ /note="RNA-binding motif; other site"
+ /db_xref="CDD:239905"
+ gene 1069776..1071521
+ /locus_tag="SARI_01104"
+ CDS 1069776..1071521
+ /locus_tag="SARI_01104"
+ /inference="protein motif:HMMPfam:IPR001460"
+ /inference="protein motif:HMMPfam:IPR005311"
+ /inference="protein motif:superfamily:IPR005311"
+ /inference="protein motif:superfamily:IPR012338"
+ /note="'KEGG: eca:ECA3821 1.4e-198 ftsI, pbpB;
+ peptidoglycan synthetase K03587;
+ COG: COG0768 Cell division protein FtsI/penicillin-binding
+ protein 2;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570152.1"
+ /db_xref="GI:161503040"
+ /db_xref="InterPro:IPR001460"
+ /db_xref="InterPro:IPR005311"
+ /db_xref="InterPro:IPR012338"
+ /translation="MKKKSGGDTRNFTPIRFALLCTAILLSMALLLGRVAWLQIVTPS
+ KLVKQEDMRSLREVTTASPRGMITDREGRPLAVSVPVNAVWADPKTIISKGGVGYNQR
+ WQALASALHLSLSTLAERVNSNPAGRFIYLARQVSPQQAEWIDKLNLPGINLREESRR
+ FYPAGHVAANLIGFTNIDGQGIEGVEKSFNAQLTGKPGSRLVRKDKFGHVIENITEVN
+ PVPAHELQLSIDERLQTVTEDALDNAVIWNKADSGAAVLINIPTGEILSMASYPDFNP
+ NNREGAQLDDFRNRAISDTFEPGSTVKPLVIMTALQQGIVQPDSVIDTHPFILDGHRI
+ RDVGYYPELTLTGILQKSSDTGVSHLSLAMPVQKLMDTYKSFGFGVPTGLGLTGESSG
+ LLPKRRYWSDLDRATFAFGYGLMVTPLQLAHVYATIGSFGIYRPLSITKVDPPVIGTR
+ VMSEELVHEVEHMMESVALPGGGGTKAAVRDYRIAVKTGTAKKIGDDGKYVDKYVAYT
+ AGVAPASNPRFALVVVINNPQNGAYYGGAVSAPVFSQIMGDVLRLENVEPDGMPADSD
+ HLLVMHGNHVSVPGL"
+ misc_feature 1069776..1071488
+ /locus_tag="SARI_01104"
+ /note="peptidoglycan synthase FtsI; Provisional; Region:
+ PRK15105"
+ /db_xref="CDD:185060"
+ misc_feature 1069959..1070420
+ /locus_tag="SARI_01104"
+ /note="Penicillin-binding Protein dimerisation domain;
+ Region: PBP_dimer; pfam03717"
+ /db_xref="CDD:217689"
+ misc_feature 1070532..1071416
+ /locus_tag="SARI_01104"
+ /note="Penicillin binding protein transpeptidase domain;
+ Region: Transpeptidase; pfam00905"
+ /db_xref="CDD:216183"
+ gene 1071588..1072397
+ /locus_tag="SARI_01105"
+ CDS 1071588..1072397
+ /locus_tag="SARI_01105"
+ /inference="protein motif:HMMPfam:IPR013216"
+ /inference="similar to AA sequence:REFSEQ:YP_150321.1"
+ /note="'KEGG: spt:SPA1038 5.2e-119 rrmA; rRNA
+ guanine-N1-methyltransferase K00563;
+ COG: COG0500 SAM-dependent methyltransferases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="23S rRNA methyltransferase A"
+ /protein_id="YP_001570153.2"
+ /db_xref="GI:448236215"
+ /db_xref="InterPro:IPR013216"
+ /translation="MSFTCPLCHQPLTQSNNSFVCPLRHQFDVAKEGYINLLPVQHKR
+ SRDPGDSAEMMQARRAFLDAGHYQQLRDAVINLLRGRLDKSATAILDIGCGEGYYTHA
+ FADALPEITTFGLDVAKTAIKAAAKRYSQVKFCVASSYRLPFADASMDAVIRIYAPCK
+ AQELARVVKPGGWVVTARPGPHHLMELKGLIYDEVRLHAPHTEQLDGFSLQQSTRLAY
+ HMQLNAEEAVALLQMTPFAWRARPEVWEQLAASVGFSCQTDFNLHLWLRDS"
+ misc_feature 1071588..1072388
+ /locus_tag="SARI_01105"
+ /note="23S rRNA methyltransferase A; Provisional; Region:
+ rrmA; PRK11088"
+ /db_xref="CDD:236841"
+ misc_feature 1071852..1072121
+ /locus_tag="SARI_01105"
+ /note="S-adenosylmethionine-dependent methyltransferases
+ (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
+ that use S-adenosyl-L-methionine (SAM or AdoMet) as a
+ substrate for methyltransfer, creating the product
+ S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
+ cd02440"
+ /db_xref="CDD:100107"
+ misc_feature order(1071861..1071881,1071933..1071938,1071996..1072004,
+ 1072050..1072052)
+ /locus_tag="SARI_01105"
+ /note="S-adenosylmethionine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:100107"
+ gene complement(1072394..1073026)
+ /locus_tag="SARI_01106"
+ CDS complement(1072394..1073026)
+ /locus_tag="SARI_01106"
+ /inference="protein motif:HMMPfam:IPR003810"
+ /inference="similar to AA sequence:INSD:CAD05516.1"
+ /note="membrane protein YebN"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570154.1"
+ /db_xref="GI:161503042"
+ /db_xref="InterPro:IPR003810"
+ /translation="MAICMFAGGGDVFNGYPGQDAVMHFTATVLLAFGMSMDAFAASI
+ GKGATLHKPKFSEALRTGFIFGAVETLTPLIGWGLGMLASKFVLEWNHWIAFILLIFL
+ GGRMIIEGIRGGSDEDDTPLRRHSFWLLVTTAIATSLDAMAVGVGLAFLQVNIIATAL
+ AIGCATLIMSTLGMMIGRFIGPMLGKRAEILGGVVLVGIGVQILWTHFHG"
+ misc_feature complement(1072397..1072960)
+ /locus_tag="SARI_01106"
+ /note="hypothetical protein; Provisional; Region:
+ PRK11469"
+ /db_xref="CDD:183151"
+ misc_feature complement(1072721..1072924)
+ /locus_tag="SARI_01106"
+ /note="Domain of unknown function DUF; Region: DUF204;
+ pfam02659"
+ /db_xref="CDD:217168"
+ misc_feature complement(1072460..1072618)
+ /locus_tag="SARI_01106"
+ /note="Domain of unknown function DUF; Region: DUF204;
+ pfam02659"
+ /db_xref="CDD:217168"
+ misc_feature complement(1073050..1073173)
+ /inference="nucleotide motif:Rfam:RF00080"
+ /note="yybp-ykoy leader"
+ gene complement(1073370..1073828)
+ /locus_tag="SARI_01107"
+ CDS complement(1073370..1073828)
+ /locus_tag="SARI_01107"
+ /inference="protein motif:HMMPfam:IPR009328"
+ /inference="similar to AA sequence:SwissProt:Q8ZP01"
+ /note="'COG: COG4811 Predicted membrane protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570155.1"
+ /db_xref="GI:161503043"
+ /db_xref="InterPro:IPR009328"
+ /translation="MTITDLVLILFIAALLAYALYDQFIMPRRNGPTQLSIALLRRSR
+ VDSVIFVGLVAILIYNNVTSHGAQMTTWLLSALALMGFYIFWIRTPRIIFKQHGFFFA
+ NVWIEYNRIKEMNLSEDGVLVMQLEQRRLLIRVRNIDDLEKIYKLLIENQ"
+ misc_feature complement(1073373..1073765)
+ /locus_tag="SARI_01107"
+ /note="hypothetical protein; Provisional; Region:
+ PRK02913"
+ /db_xref="CDD:179499"
+ gene complement(1073887..1074738)
+ /locus_tag="SARI_01108"
+ CDS complement(1073887..1074738)
+ /locus_tag="SARI_01108"
+ /inference="protein motif:HMMPfam:IPR004704"
+ /inference="protein motif:HMMTigr:IPR004704"
+ /inference="similar to AA sequence:REFSEQ:NP_456338.1"
+ /note="hosphoenolpyruvate-dependent sugar
+ phosphotransferase system catalyzes the phosphorylation of
+ incoming sugar substrates concomitant with their
+ translocation across the cell membrane; IID with IIC forms
+ the translocation channel"
+ /codon_start=1
+ /transl_table=11
+ /product="PTS system mannose-specific transporter subunit
+ IID"
+ /protein_id="YP_001570156.1"
+ /db_xref="GI:161503044"
+ /db_xref="InterPro:IPR004704"
+ /translation="MVDMTKTTTEKKLTPSDIRGVFLRSNLFQGSWNFERMQALGFCF
+ SMVPAIRRLYPENNDARKQAIKRHLEFFNTHPYVAAPVLGVTLAMEEKRANGAEIDDG
+ AINGIKVGLMGPLAGVGDPIFWGTVRPVFAALGAGIAMSGSLLGPLLFFILFNLVRLA
+ TRYYGVAYGYRKGVDIVKDMGGGFLQKLTEGASILGLFVMGALVNKWTHVNIPLVVST
+ ITGQDGQTRVTTVQTILDQLMPGLVPLLLTFACMWLLRKKVNPLWIIVGFFIIGIAGY
+ AVGLLGQ"
+ misc_feature complement(1073950..1074738)
+ /locus_tag="SARI_01108"
+ /note="PTS system mannose-specific transporter subunit
+ IID; Provisional; Region: PRK11103"
+ /db_xref="CDD:182965"
+ gene complement(1074751..1075551)
+ /locus_tag="SARI_01109"
+ CDS complement(1074751..1075551)
+ /locus_tag="SARI_01109"
+ /inference="protein motif:HMMPfam:IPR004700"
+ /inference="protein motif:HMMTigr:IPR004700"
+ /inference="similar to AA sequence:REFSEQ:YP_216812.1"
+ /note="'KEGG: eci:UTI89_C2015 2.8e-127 manY; PTS enzyme
+ IIC, mannose-specific K02795;
+ COG: COG3715 Phosphotransferase system,
+ mannose/fructose/N-acetylgalactosamine-specific component
+ IIC;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570157.1"
+ /db_xref="GI:161503045"
+ /db_xref="InterPro:IPR004700"
+ /translation="MEITTLQIVLVFIVACIAGMESVLDEFQFHRPLIACTLIGAVLG
+ DMKTGIIIGGTLEMIALGWMNIGAAVAPDAALASIISTVLVIAGHQSIGAGIALAIPL
+ AAAGQVLTIIVRTITVAFQHAADKAAENGNLTALSWLHVSSLFLQAMRIAIPAVIVAI
+ SVGTSEVQGMLNAIPEVVTGGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAA
+ FTNFNLVALGVIGAVMAIFYIQLSPKYNRVTGAPAQAAGTNDLDNELD"
+ misc_feature complement(1074763..1075551)
+ /locus_tag="SARI_01109"
+ /note="PTS system mannose-specific transporter subunit
+ IIC; Provisional; Region: PRK15065"
+ /db_xref="CDD:237895"
+ gene complement(1075605..1076570)
+ /locus_tag="SARI_01110"
+ CDS complement(1075605..1076570)
+ /locus_tag="SARI_01110"
+ /inference="protein motif:BlastProDom:IPR004720"
+ /inference="protein motif:Gene3D:IPR004701"
+ /inference="protein motif:Gene3D:IPR004720"
+ /inference="protein motif:HMMPfam:IPR004701"
+ /inference="protein motif:HMMPfam:IPR004720"
+ /inference="protein motif:HMMTigr:IPR004720"
+ /inference="protein motif:HMMTigr:IPR013789"
+ /inference="protein motif:superfamily:IPR004701"
+ /inference="protein motif:superfamily:IPR004720"
+ /inference="similar to AA sequence:REFSEQ:YP_150326.1"
+ /note="'KEGG: spt:SPA1043 7.0e-163 manX; PTS system,
+ mannose-specific IIAB component K02793:K02794;
+ COG: COG2893 Phosphotransferase system,
+ mannose/fructose-specific component IIA;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570158.1"
+ /db_xref="GI:161503046"
+ /db_xref="InterPro:IPR004701"
+ /db_xref="InterPro:IPR004720"
+ /db_xref="InterPro:IPR013789"
+ /translation="MTIAIVIGTHGWAAEQLLKTTEMLLGEQENVGWIDFVPGENAET
+ LIEKYNAQLAKLNTSKGVLFLVDTWGGSPFNAASRIVVDKERYEVIAGVNIPMLVETF
+ MARDDDPSFDELVALAVETGREGVKALKAKPVEKAASAPVAAPKAAAPAKPMGPNDYM
+ IIGLARIDDRLIHGQVATRWTKETNVSRIIVVSDEVAADTVRKTLLTQVAPPGVTAHV
+ VDVAKMIRVYNNPKYAGERVMLLFTNPTDVERIVEGGVKVTSVNIGGMAYRQGKTQVN
+ NAVSVDEKDIEAFKKLNERGIELEVRKVSTDPKLKMMDLIAKVAK"
+ misc_feature complement(1075614..1076570)
+ /locus_tag="SARI_01110"
+ /note="PTS system mannose-specific transporter subunits
+ IIAB; Provisional; Region: PRK15088"
+ /db_xref="CDD:185045"
+ misc_feature complement(1076199..1076564)
+ /locus_tag="SARI_01110"
+ /note="PTS_IIA, PTS system, mannose/sorbose specific IIA
+ subunit. The bacterial phosphoenolpyruvate: sugar
+ phosphotransferase system (PTS) is a multi-protein system
+ involved in the regulation of a variety of metabolic and
+ transcriptional processes. This family...; Region:
+ PTS_IIA_man; cd00006"
+ /db_xref="CDD:237978"
+ misc_feature complement(order(1076262..1076264,1076355..1076357,
+ 1076463..1076465,1076496..1076501,1076541..1076543))
+ /locus_tag="SARI_01110"
+ /note="active pocket/dimerization site; other site"
+ /db_xref="CDD:237978"
+ misc_feature complement(order(1076355..1076357,1076370..1076372,
+ 1076541..1076543))
+ /locus_tag="SARI_01110"
+ /note="active site"
+ /db_xref="CDD:237978"
+ misc_feature complement(1076541..1076543)
+ /locus_tag="SARI_01110"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:237978"
+ misc_feature complement(1075635..1076087)
+ /locus_tag="SARI_01110"
+ /note="PTS_IIB, PTS system, Mannose/sorbose specific IIB
+ subunit. The bacterial phosphoenolpyruvate: sugar
+ phosphotransferase system (PTS) is a multi-protein system
+ involved in the regulation of a variety of metabolic and
+ transcriptional processes. This family...; Region:
+ PTS_IIB_man; cd00001"
+ /db_xref="CDD:237975"
+ misc_feature complement(order(1076052..1076054,1076061..1076063,
+ 1076073..1076075))
+ /locus_tag="SARI_01110"
+ /note="active site"
+ /db_xref="CDD:237975"
+ misc_feature complement(1076052..1076054)
+ /locus_tag="SARI_01110"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:237975"
+ gene 1077042..1078601
+ /locus_tag="SARI_01111"
+ CDS 1077042..1078601
+ /locus_tag="SARI_01111"
+ /inference="protein motif:HMMPfam:IPR000644"
+ /inference="protein motif:HMMPfam:IPR005170"
+ /inference="protein motif:HMMPfam:IPR005496"
+ /inference="similar to AA sequence:REFSEQ:YP_216809.1"
+ /note="'KEGG: eci:UTI89_C0656 3.5e-25 ybeX; putative
+ transport protein K06189;
+ COG: COG1253 Hemolysins and related proteins containing
+ CBS domains;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570159.1"
+ /db_xref="GI:161503047"
+ /db_xref="InterPro:IPR000644"
+ /db_xref="InterPro:IPR005170"
+ /db_xref="InterPro:IPR005496"
+ /translation="MELLMDPSILAGLLTLVVLEIVLGIDNLVFIAILADKLPPKQRD
+ KARLIGLSLALIMRLALLSIISWMVTLTKPLFTAWDFTFSGRDLIMLLGGIFLLFKAT
+ TELHERLENREHDAGHGKGYASFWVVVTQIVILDAVFSLDAVITAVGMVNHLPVMMAA
+ VVIAMAMMLLASKPLTRFVNQHPTVVVLCLSFLLMIGLSLVAEGFGFHIPKGYLYAAI
+ GFSIIIEVFNQIARRNFIRHQSTLPLRARTADAILRLMGGKRQANTQHETDSPAAMPV
+ PEGAFAEEERYMINGVLTLASRSLRSIMTPRGEISWVDANLSVAEIRQQLLSSPHSLF
+ PICRGELDEIIGIVRAKELLVALEEGADVAAIAASSPAIVVPETLDPINLLGVLRRAR
+ GSFVIVTNEFGVVQGLVTPLDVLEAIAGEFPDADETPEIVADAGGWVVKGGTDLHALQ
+ QALDVDHLVNEEGDIATVAGLVIAAKGHIPRVGDVIDVPPLRITIVEANDYRVDLVRI
+ VKEQPAHDEEE"
+ misc_feature 1077042..1077761
+ /locus_tag="SARI_01111"
+ /note="Membrane protein TerC, possibly involved in
+ tellurium resistance [Inorganic ion transport and
+ metabolism]; Region: TerC; COG0861"
+ /db_xref="CDD:223930"
+ misc_feature <1077591..1078595
+ /locus_tag="SARI_01111"
+ /note="Hemolysins and related proteins containing CBS
+ domains [General function prediction only]; Region: TlyC;
+ COG1253"
+ /db_xref="CDD:224173"
+ misc_feature 1077966..1078292
+ /locus_tag="SARI_01111"
+ /note="This cd contains two tandem repeats of the
+ cystathionine beta-synthase (CBS pair) domains associated
+ with the CorC_HlyC domain. CorC_HlyC is a transporter
+ associated domain. This small domain is found in Na+/H+
+ antiporters, in proteins involved in...; Region:
+ CBS_pair_CorC_HlyC_assoc; cd04590"
+ /db_xref="CDD:239963"
+ misc_feature 1078332..1078571
+ /locus_tag="SARI_01111"
+ /note="Transporter associated domain; Region: CorC_HlyC;
+ smart01091"
+ /db_xref="CDD:215020"
+ gene complement(1078631..1080229)
+ /locus_tag="SARI_01112"
+ CDS complement(1078631..1080229)
+ /locus_tag="SARI_01112"
+ /inference="protein motif:HMMPfam:IPR001633"
+ /inference="protein motif:HMMSmart:IPR001633"
+ /inference="similar to AA sequence:REFSEQ:YP_150329.1"
+ /note="'KEGG: eci:UTI89_C1702 7.6e-30 hypothetical
+ protein;
+ COG: COG2200 FOG: EAL domain;
+ Psort location: endoplasmic reticulum, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570160.1"
+ /db_xref="GI:161503048"
+ /db_xref="InterPro:IPR001633"
+ /translation="MQTAQRIINHYRRNRFIVCTICALTTLILTLSIRFISERNLNHH
+ RTVAFANHAVDALDNVLHPLQVGRNVLLPLLELPCATAHLPLRKQAARLQTIRSIGLV
+ KEGILYCSSVFGARNIPIRQLQPALPAAGDLLLLSTDQSLLKGSPILIQWYPASANGQ
+ DGVMEIVNIDLLTTMLLEPQQPQITSASLTVGKRHLLYGRGVVDNLPELKNEERYQRS
+ SQHFPFTISVTGPSAGKLAFKHLPTQLPLAVLLSLLIGYIAWLATASRMSFSWEINLA
+ LAEREFELFCQPLLNARTQQCTGVEILLRWNNPRQGWISPDVFIPIAEEHNLIAPLTR
+ YVIAETIRQRHYLPISHQFHVGINVAASHFRHGVLLRDLNQYWFSAEPVQQLVLELTE
+ RDALLDVDYRLMRELHRKGVKLAIDDFGTGNSSLSWLEKLRPDILKIDKSFTAAIGTD
+ AVNSTVTDIIIALGQRLNIELVAEGVENQAQAQYLRQHGVQMLQGYLYAKPMPISEFP
+ QWLAGSPPPPARHNGQIMPAMPHL"
+ misc_feature complement(1078697..1080109)
+ /locus_tag="SARI_01112"
+ /note="phage resistance protein; Provisional; Region:
+ PRK10551"
+ /db_xref="CDD:182541"
+ misc_feature complement(1079483..1080106)
+ /locus_tag="SARI_01112"
+ /note="CSS motif domain associated with EAL; Region:
+ CSS-motif; pfam12792"
+ /db_xref="CDD:221774"
+ misc_feature complement(1078712..1079416)
+ /locus_tag="SARI_01112"
+ /note="EAL domain. This domain is found in diverse
+ bacterial signaling proteins. It is called EAL after its
+ conserved residues and is also known as domain of unknown
+ function 2 (DUF2). The EAL domain has been shown to
+ stimulate degradation of a second...; Region: EAL;
+ cd01948"
+ /db_xref="CDD:238923"
+ gene complement(1080379..1081725)
+ /locus_tag="SARI_01113"
+ CDS complement(1080379..1081725)
+ /locus_tag="SARI_01113"
+ /inference="protein motif:HMMPfam:IPR005130"
+ /inference="protein motif:HMMPfam:IPR005131"
+ /inference="protein motif:HMMTigr:IPR004644"
+ /inference="similar to AA sequence:HMMTigr:IPR004644"
+ /note="'KEGG: stt:t1051 3.0e-242 sdaA; L-serine deaminase
+ 1 K01752;
+ COG: COG1760 L-serine deaminase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="L-serine deaminase I/L-threonine deaminase I"
+ /protein_id="YP_001570161.2"
+ /db_xref="GI:448236216"
+ /db_xref="InterPro:IPR004644"
+ /db_xref="InterPro:IPR005130"
+ /db_xref="InterPro:IPR005131"
+ /translation="MFKVGIGPSSSHTVGPMKAGKQFVDDLVEKGLLDNVTRVAVDVY
+ GSLSLTGKGHHTDIAIIMGLAGNEPATVDIDSIPGFIRDVETRERLLLAQGRHEVDFP
+ KDDGMRFHNGNLPLHENGMQIHAWHNDTVIYSQTYYSIGGGFIVDEAHFGQEATNEVT
+ VPYPFKSAKEMLEYCSSTGLSLSGMVMQNELALHSKKEIEEYFGHVWQTMQACIDRGM
+ NTEGVLPGPLRVPRRASALRRMLVSSDKLSNDPMNVIDWVNMFALAVNEENAAGGRVV
+ TAPTNGACGIVPAVLAYYDHFIESVSPDIYTRYFLAAGAIGALYKMNASISGAEVGCQ
+ GEVGVACSMAAAGLAELLGASPEQVCVAAEIGMEHNLGLTCDPVAGQVQVPCIERNAI
+ ASVKAINAARMAMRRTSAPRVSLDKVIETMYETGKDMNAKYRETSRGGLAIKVQCD"
+ misc_feature complement(1080382..1081725)
+ /locus_tag="SARI_01113"
+ /note="L-serine deaminase; Provisional; Region: PRK15023"
+ /db_xref="CDD:184984"
+ misc_feature complement(1081267..1081725)
+ /locus_tag="SARI_01113"
+ /note="Serine dehydratase beta chain; Region: SDH_beta;
+ pfam03315"
+ /db_xref="CDD:217489"
+ misc_feature complement(1080394..1081194)
+ /locus_tag="SARI_01113"
+ /note="Serine dehydratase alpha chain; Region: SDH_alpha;
+ pfam03313"
+ /db_xref="CDD:217488"
+ gene complement(1081998..1082576)
+ /locus_tag="SARI_01114"
+ CDS complement(1081998..1082576)
+ /locus_tag="SARI_01114"
+ /inference="protein motif:Gene3D:IPR000086"
+ /inference="protein motif:HMMPfam:IPR000086"
+ /inference="protein motif:ScanRegExp:IPR000059"
+ /inference="protein motif:superfamily:IPR000086"
+ /inference="similar to AA sequence:REFSEQ:YP_150331.1"
+ /note="'KEGG: gbe:GbCGDNIH1_1634 1.6e-30 coA
+ pyrophosphatase K01529;
+ COG: COG0494 NTP pyrophosphohydrolases including oxidative
+ damage repair enzymes;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570162.1"
+ /db_xref="GI:161503050"
+ /db_xref="InterPro:IPR000059"
+ /db_xref="InterPro:IPR000086"
+ /translation="MDTSRLTLDHFLSRFQLLRPQITHETLNQRQAAVLIPVVRRPQP
+ GLLLTQRAVHLRKHAGQVAFPGGAVDSSDASLIAAALREAQEEVAIPPEAVEVIGVLP
+ PIDSVTGFQVTPVVGIIPSDLPWRASEDEVSAVFEMPLAQALHLGRYHPIDVYRRGNS
+ HRVWLSWYEHYFVWGMTASIIRELALQIGVKP"
+ misc_feature complement(1082025..1082489)
+ /locus_tag="SARI_01114"
+ /note="Coenzyme A pyrophosphatase (CoAse), a member of the
+ Nudix hydrolase superfamily, functions to catalyze the
+ elimination of oxidized inactive CoA, which can inhibit
+ CoA-utilizing enzymes. The need of CoAses mainly arises
+ under conditions of oxidative...; Region: CoAse; cd03426"
+ /db_xref="CDD:239518"
+ misc_feature complement(order(1082247..1082249,1082328..1082333,
+ 1082373..1082375,1082394..1082396,1082424..1082426))
+ /locus_tag="SARI_01114"
+ /note="putative active site [active]"
+ /db_xref="CDD:239518"
+ misc_feature complement(order(1082247..1082249,1082331..1082333,
+ 1082373..1082375,1082394..1082396,1082424..1082426))
+ /locus_tag="SARI_01114"
+ /note="putative CoA binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:239518"
+ misc_feature complement(1082307..1082378)
+ /locus_tag="SARI_01114"
+ /note="nudix motif; other site"
+ /db_xref="CDD:239518"
+ misc_feature complement(1082328..1082330)
+ /locus_tag="SARI_01114"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:239518"
+ gene complement(1082580..1083944)
+ /locus_tag="SARI_01115"
+ CDS complement(1082580..1083944)
+ /locus_tag="SARI_01115"
+ /inference="protein motif:BlastProDom:IPR005801"
+ /inference="protein motif:HMMPfam:IPR005801"
+ /inference="protein motif:HMMPfam:IPR006805"
+ /inference="protein motif:HMMTigr:IPR005802"
+ /inference="similar to AA sequence:INSD:AAL20739.1"
+ /note="'KEGG: stm:STM1824 2.8e-239 pabB; p-aminobenzoate
+ synthetase, component I K01665;
+ COG: COG0147 Anthranilate/para-aminobenzoate synthases
+ component I;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="para-aminobenzoate synthase component I"
+ /protein_id="YP_001570163.1"
+ /db_xref="GI:161503051"
+ /db_xref="InterPro:IPR005801"
+ /db_xref="InterPro:IPR005802"
+ /db_xref="InterPro:IPR006805"
+ /translation="MMKTLSPTVITLPWRPDAAEHYFAPVNHLPWAMLLHSGNAIHPY
+ NRFDILVADPVTMLTTRAQETTVCTAGATTVTLDDPLRVLQTQLEKLPFHPQPDPDLP
+ FQGGALGLFGYDLGRRFETLPDTAAHDIAVPDMAIGIYDWALIVDHQKQVVSLISYHD
+ ADARYRWLTRQRAPTRTPFTLTSAWQSNMTRCEYGERFRQVQAWLHSGDCYQVNLSQR
+ FQAGYEGDEWQAFERLNRANRAPFSAFLRLHDGVILSLSPERFIQLENGHIQTRPIKG
+ TLPRLNDPQADRQQAQKLANSTKDRAENLMIVDLMRNDIGRVAVPGSVKVPELFVVEP
+ FPGVHHLVSTITARLPDSLHATDLLRAAFPGGSITGAPKVRAMEIIDELEPQRRNAWC
+ GSIGYLSFCGNMDTSITIRTVTATQGQLYCSAGGGIVADSKEEAEYQETFDKVNRILH
+ PLEN"
+ misc_feature complement(1082583..1083941)
+ /locus_tag="SARI_01115"
+ /note="aminodeoxychorismate synthase subunit I;
+ Provisional; Region: pabB; PRK15465"
+ /db_xref="CDD:185362"
+ misc_feature complement(1083480..1083878)
+ /locus_tag="SARI_01115"
+ /note="Anthranilate synthase component I, N terminal
+ region; Region: Anth_synt_I_N; pfam04715"
+ /db_xref="CDD:218224"
+ misc_feature complement(1082601..1083626)
+ /locus_tag="SARI_01115"
+ /note="aminodeoxychorismate synthase, component I,
+ bacterial clade; Region: pabB; TIGR00553"
+ /db_xref="CDD:233020"
+ gene 1084025..1084204
+ /locus_tag="SARI_01116"
+ CDS 1084025..1084204
+ /locus_tag="SARI_01116"
+ /inference="protein motif:HMMPfam:IPR005371"
+ /inference="similar to AA sequence:INSD:CAD05506.1"
+ /note="'COG: COG3140 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoskeletal, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570164.1"
+ /db_xref="GI:161503052"
+ /db_xref="InterPro:IPR005371"
+ /translation="MFAGLPSLSHEQQQKAVERIQELMSQGMSSGEAIAQVAGELRAN
+ HTGERIVARFEDEDE"
+ misc_feature 1084025..1084201
+ /locus_tag="SARI_01116"
+ /note="hypothetical protein; Provisional; Region:
+ PRK05114"
+ /db_xref="CDD:179941"
+ gene complement(1084210..1084554)
+ /locus_tag="SARI_01117"
+ CDS complement(1084210..1084554)
+ /locus_tag="SARI_01117"
+ /inference="protein motif:Gene3D:IPR013813"
+ /inference="protein motif:HMMPfam:IPR006175"
+ /inference="protein motif:ScanRegExp:IPR006056"
+ /inference="protein motif:superfamily:IPR013813"
+ /inference="similar to AA sequence:REFSEQ:NP_460778.1"
+ /note="'KEGG: mxa:MXAN_0920 1.3e-05 2-aminomuconate
+ deaminase;
+ COG: COG0251 Putative translation initiation inhibitor,
+ yjgF family;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570165.1"
+ /db_xref="GI:161503053"
+ /db_xref="InterPro:IPR006056"
+ /db_xref="InterPro:IPR006175"
+ /db_xref="InterPro:IPR013813"
+ /translation="MTIVRIDAEDRWSDVVIHNNTLWYTGVPENLDADAFGQTANTLA
+ QIDAVLEKQGSSKSRILDATIFLSDKADFAAMNKAWDAWVVAGHAPVRCTVQAGLMNP
+ KYKVEIKIVAAV"
+ misc_feature complement(1084216..1084524)
+ /locus_tag="SARI_01117"
+ /note="This group of proteins belong to a large family of
+ YjgF/YER057c/UK114-like proteins present in bacteria,
+ archaea, and eukaryotes with no definitive function. The
+ conserved domain is similar in structure to chorismate
+ mutase but there is no sequence...; Region:
+ YjgF_YER057c_UK114_like_2; cd06150"
+ /db_xref="CDD:100007"
+ misc_feature complement(order(1084222..1084224,1084228..1084230,
+ 1084234..1084236,1084264..1084290,1084303..1084305,
+ 1084315..1084317,1084324..1084326,1084357..1084359,
+ 1084363..1084365,1084369..1084374,1084378..1084380,
+ 1084477..1084482,1084486..1084488,1084492..1084494,
+ 1084501..1084503,1084507..1084509,1084516..1084521))
+ /locus_tag="SARI_01117"
+ /note="homotrimer interaction site [polypeptide binding];
+ other site"
+ /db_xref="CDD:100007"
+ misc_feature complement(order(1084234..1084236,1084279..1084281,
+ 1084324..1084326,1084336..1084338,1084519..1084521))
+ /locus_tag="SARI_01117"
+ /note="putative active site [active]"
+ /db_xref="CDD:100007"
+ gene 1084685..1086595
+ /locus_tag="SARI_01118"
+ CDS 1084685..1086595
+ /locus_tag="SARI_01118"
+ /inference="protein motif:HMMSmart:IPR006555"
+ /inference="protein motif:HMMSmart:IPR014001"
+ /inference="protein motif:superfamily:IPR011034"
+ /note="'KEGG: sty:STY1951 0. putative ATP-dependent
+ helicase K03722;
+ COG: COG1199 Rad3-related DNA helicases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570166.1"
+ /db_xref="GI:161503054"
+ /db_xref="InterPro:IPR006555"
+ /db_xref="InterPro:IPR011034"
+ /db_xref="InterPro:IPR014001"
+ /translation="MTDDFAADGQLAQAITGFKPREPQRQMAVAVTQAIENAQPLVVE
+ AGTGTGKTYAYLAPALRAGKKVIISTGSKALQDQLYSRDLPTVAKALAFTGKTALLKG
+ RSNYLCLERLEQQALAGGDLPVQTLSDVILLRSWSNQTLDGDISTCVSVAEDSQAWPL
+ VTSTNDNCLGGDCPLYKECFVVKARKKAMDADVVIVNHHLFLADMVVKESGFGELIPQ
+ AEVMIFDEAHQLPDIASQYFGQSLSSRQLLDLAKDITIAYRTELKDTQQLQKCADRLA
+ QSAQDFRLQLGEPGYRGNLRELLTDPRIQRAFLLLDDTLELCYDVAKLSLGRSALLDA
+ AFERATLYRSRLKRLKEINQPGYSYWYECTSRHFTLALTPLTVADKFKEVMEQKPGSW
+ IFTSATLSVNDDLRHFTARLGIEQSESMLLPSPFDYTRQALLCVPRNLPQTNQPGAAR
+ QLAAMLRPIIEANNGRCFMLCTSHAMMRDLAEQFRATMTLPVLLQGETSKGQLLQQFV
+ SAGNALLVATSSFWEGVDVRGDTLSLVIIDKLPFTSPDDPLLKARMEDCRLRGGDPFD
+ EVQLPDAVITLKQGVGRLIRDADDRGVLVICDNRLVMRPYGATFLASLPPAPRTRDIA
+ RAVRFLSIPSAG"
+ misc_feature 1084697..1086580
+ /locus_tag="SARI_01118"
+ /note="Rad3-related DNA helicases [Transcription / DNA
+ replication, recombination, and repair]; Region: DinG;
+ COG1199"
+ /db_xref="CDD:224120"
+ misc_feature 1084781..>1084930
+ /locus_tag="SARI_01118"
+ /note="DEAD-like helicases superfamily. A diverse family
+ of proteins involved in ATP-dependent RNA or DNA
+ unwinding. This domain contains the ATP-binding region;
+ Region: DEXDc; cl17251"
+ /db_xref="CDD:247805"
+ misc_feature <1085201..1085425
+ /locus_tag="SARI_01118"
+ /note="DEAD_2; Region: DEAD_2; pfam06733"
+ /db_xref="CDD:219153"
+ misc_feature 1086050..1086535
+ /locus_tag="SARI_01118"
+ /note="Helicase C-terminal domain; Region: Helicase_C_2;
+ pfam13307"
+ /db_xref="CDD:222037"
+ gene 1086653..1087348
+ /locus_tag="SARI_01119"
+ CDS 1086653..1087348
+ /locus_tag="SARI_01119"
+ /inference="protein motif:HMMPfam:IPR000905"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:INSD:AAX08053.1"
+ /note="'KEGG: ecc:c2211 7.6e-102 yeaZ; hypothetical
+ protease YeaZ K01423;
+ COG: COG1214 Inactive homolog of metal-dependent
+ proteases, putative molecular chaperone;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570167.1"
+ /db_xref="GI:161503055"
+ /db_xref="InterPro:IPR000905"
+ /db_xref="InterPro:IPR012337"
+ /translation="MRILAIDTATEACSVALWNNGTINAHFELCPREHTQRILPMVQE
+ ILAASGALLNEIDALAFGRGPGSFTGVRIGIGIAQGLALGANLPMIGVSTLATMAQGA
+ WRKTGATRVLAAIDARMGEVYWAEYQRNAQGVWLGEETEAVLKPEQVGERLEQLSGQW
+ ATVGTGWSAWPDLAQGCGLSLYDGEVSLPAAEDMLPIASQKLAAGETVAVEHAEPVYL
+ RNEVAWKKLPGKE"
+ misc_feature 1086653..1087330
+ /locus_tag="SARI_01119"
+ /note="Inactive homolog of metal-dependent proteases,
+ putative molecular chaperone [Posttranslational
+ modification, protein turnover, chaperones]; Region:
+ COG1214"
+ /db_xref="CDD:224135"
+ misc_feature 1086728..>1087030
+ /locus_tag="SARI_01119"
+ /note="Glycoprotease family; Region: Peptidase_M22;
+ pfam00814"
+ /db_xref="CDD:216132"
+ gene 1087420..1088001
+ /locus_tag="SARI_01120"
+ CDS 1087420..1088001
+ /locus_tag="SARI_01120"
+ /inference="protein motif:HMMPfam:IPR004658"
+ /inference="protein motif:HMMTigr:IPR004658"
+ /inference="similar to AA sequence:REFSEQ:YP_150337.1"
+ /note="'COG: COG3065 Starvation-inducible outer membrane
+ lipoprotein;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570168.1"
+ /db_xref="GI:161503056"
+ /db_xref="InterPro:IPR004658"
+ /translation="MAVQKRLIKGALACAFALMLSGCATIPDAIKGSSPTPQQDLVRV
+ MNAPQLYIGQEARFGGKVVAVQNQQGKTRLEIATVPLDSGARPVLGEASRGRIFADVN
+ GFLDPVDFRGQLVTVVGPITGTVDGKIGNTPYKFMLMQATGYKRWHLVQQVVMPPQPI
+ DPWFYGGRAWPYGYGGWGWYNPGPAEVQTIVTE"
+ misc_feature 1087420..1087995
+ /locus_tag="SARI_01120"
+ /note="Starvation-inducible outer membrane lipoprotein
+ [Cell envelope biogenesis, outer membrane]; Region: Slp;
+ COG3065"
+ /db_xref="CDD:225607"
+ gene 1089850..1089938
+ /locus_tag="SARI_01121"
+ misc_RNA 1089850..1089938
+ /locus_tag="SARI_01121"
+ /product="SroD RNA"
+ /inference="nucleotide motif:Rfam:RF00370"
+ /note="Rfam score 99.86"
+ gene 1089976..1091091
+ /locus_tag="SARI_01122"
+ CDS 1089976..1091091
+ /locus_tag="SARI_01122"
+ /inference="protein motif:HMMPfam:IPR002121"
+ /inference="protein motif:HMMPfam:IPR002562"
+ /inference="protein motif:HMMSmart:IPR002121"
+ /inference="protein motif:HMMSmart:IPR002562"
+ /inference="protein motif:HMMTigr:IPR006292"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:REFSEQ:YP_216797.1"
+ /note="'KEGG: sec:SC1810 2.9e-196 rnd; RNase D, processes
+ tRNA precursor K03684;
+ COG: COG0349 Ribonuclease D;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="ribonuclease D"
+ /protein_id="YP_001570169.1"
+ /db_xref="GI:161503057"
+ /db_xref="InterPro:IPR002121"
+ /db_xref="InterPro:IPR002562"
+ /db_xref="InterPro:IPR006292"
+ /db_xref="InterPro:IPR012337"
+ /translation="MIETDDALASLCEAVRACPAIALDTEFVRTRTYYPQLGLIQLFD
+ GADVALIDPLGITDWSPLKAVLRDTGITKFLHAGSEDLEVFLNAFGELPEPLIDTQIL
+ AAFCGRPLSWGFASMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPIAK
+ KLMIETEAAGWLPAALDECRLMQQRRQEIQAPEEAWRDITNAWQLRTRQLACLQLLAD
+ WRLRKARERDMAVNFVVREENLWAVARYMPGSLGELDSLGLSGSEIRFHGKTLISLVA
+ KAQALPEEALPEPLLNLLDMPGYRKAFKAIKALVAEVSAAHHVSGELLASRRQINQLL
+ NWHWKLKPQNGQPELVSGWRAELMAEKLALLLQEYPR"
+ misc_feature 1089976..1091037
+ /locus_tag="SARI_01122"
+ /note="ribonuclease D; Provisional; Region: PRK10829"
+ /db_xref="CDD:236771"
+ misc_feature 1089994..1090524
+ /locus_tag="SARI_01122"
+ /note="DEDDy 3'-5' exonuclease domain of
+ Ribonuclease D and similar proteins; Region: RNaseD_exo;
+ cd06142"
+ /db_xref="CDD:176654"
+ misc_feature order(1090045..1090047,1090051..1090053,1090216..1090218,
+ 1090414..1090416,1090426..1090428)
+ /locus_tag="SARI_01122"
+ /note="catalytic site [active]"
+ /db_xref="CDD:176654"
+ misc_feature order(1090045..1090056,1090201..1090206,1090210..1090218,
+ 1090312..1090317,1090414..1090416,1090426..1090428)
+ /locus_tag="SARI_01122"
+ /note="putative active site [active]"
+ /db_xref="CDD:176654"
+ misc_feature order(1090048..1090056,1090201..1090206,1090210..1090215,
+ 1090312..1090317,1090414..1090416,1090426..1090428)
+ /locus_tag="SARI_01122"
+ /note="putative substrate binding site [chemical binding];
+ other site"
+ /db_xref="CDD:176654"
+ misc_feature 1090591..>1090719
+ /locus_tag="SARI_01122"
+ /note="HRDC domain; Region: HRDC; cl02578"
+ /db_xref="CDD:207658"
+ gene complement(1091212..1091478)
+ /gene="minE"
+ /locus_tag="SARI_01123"
+ CDS complement(1091212..1091478)
+ /gene="minE"
+ /locus_tag="SARI_01123"
+ /inference="protein motif:HMMPfam:IPR005527"
+ /inference="protein motif:HMMTigr:IPR005527"
+ /inference="similar to AA sequence:INSD:AAL20731.1"
+ /note="works in conjunction with MinC and MinD to enable
+ cell division at the midpoint of the long axis of the
+ cell"
+ /codon_start=1
+ /transl_table=11
+ /product="cell division topological specificity factor
+ MinE"
+ /protein_id="YP_001570170.1"
+ /db_xref="GI:161503058"
+ /db_xref="InterPro:IPR005527"
+ /translation="MALLDFFLSRKKSTANIAKERLQIIVAERRRSDAEPHYLPQLRK
+ DILEVICKYVQIDPEMVTVQLEQKDGDISILELNVTLPEAEESK"
+ misc_feature complement(1091218..1091478)
+ /gene="minE"
+ /locus_tag="SARI_01123"
+ /note="cell division topological specificity factor MinE;
+ Reviewed; Region: minE; PRK00296"
+ /db_xref="CDD:234718"
+ unsure 1091325..1091343
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(1091482..1092294)
+ /locus_tag="SARI_01124"
+ CDS complement(1091482..1092294)
+ /locus_tag="SARI_01124"
+ /inference="protein motif:HMMPfam:IPR002586"
+ /inference="protein motif:HMMTigr:IPR010223"
+ /inference="similar to AA sequence:REFSEQ:YP_216795.1"
+ /note="ATPase; with MinC inhibits cell division by
+ blocking formation of the polar Z ring septums"
+ /codon_start=1
+ /transl_table=11
+ /product="cell division inhibitor MinD"
+ /protein_id="YP_001570171.1"
+ /db_xref="GI:161503059"
+ /db_xref="InterPro:IPR002586"
+ /db_xref="InterPro:IPR010223"
+ /translation="MARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLR
+ NLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRTENLFILPASQTRDKDALTREGV
+ AKVLDSLRAMDFEFIVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGIL
+ ASKSRRAENGEEPIKEHLLLTRYNPGRVNKGDMLSMEDVLEILRIKLVGVIPEDQSVL
+ RASNQGEPVILDATADAGKAYADTVDRLLGEERPFRFVEEEKKGFLKRLFGG"
+ misc_feature complement(1091485..1092294)
+ /locus_tag="SARI_01124"
+ /note="cell division inhibitor MinD; Provisional; Region:
+ PRK10818"
+ /db_xref="CDD:182756"
+ misc_feature complement(1091578..1092234)
+ /locus_tag="SARI_01124"
+ /note="Bacterial cell division requires the formation of a
+ septum at mid-cell. The site is determined by the min
+ operon products MinC, MinD and MinE. MinC is a nonspecific
+ inhibitor of the septum protein FtsZ. MinE is the
+ supressor of MinC. MinD plays a pivotal...; Region: MinD;
+ cd02036"
+ /db_xref="CDD:238993"
+ misc_feature complement(1092175..1092183)
+ /locus_tag="SARI_01124"
+ /note="Switch I; other site"
+ /db_xref="CDD:238993"
+ misc_feature complement(1091923..1091937)
+ /locus_tag="SARI_01124"
+ /note="Switch II; other site"
+ /db_xref="CDD:238993"
+ gene complement(1092318..1093055)
+ /gene="minC"
+ /locus_tag="SARI_01125"
+ CDS complement(1092318..1093055)
+ /gene="minC"
+ /locus_tag="SARI_01125"
+ /inference="protein motif:HMMPfam:IPR005526"
+ /inference="protein motif:HMMPfam:IPR007874"
+ /inference="protein motif:HMMTigr:IPR013033"
+ /inference="similar to AA sequence:INSD:AAL20729.1"
+ /note="blocks the formation of polar Z-ring septums"
+ /codon_start=1
+ /transl_table=11
+ /product="septum formation inhibitor"
+ /protein_id="YP_001570172.1"
+ /db_xref="GI:161503060"
+ /db_xref="InterPro:IPR005526"
+ /db_xref="InterPro:IPR007874"
+ /db_xref="InterPro:IPR013033"
+ /translation="MINSKLSKARMSNTPIELKGSSFTLSVVHMHEAEPEVIRQALED
+ KIAQAPAFLKHAPVVINVSGLENPVNWPELHKIVTSTGLRIIGVSGCKDASLKAEIDR
+ MGLPLLTEGKEKAVRPAPVESATPSEPPQNANPITKTRLIDVPVRSGQRIYAPQCDLI
+ VTSHVSAGAELIADGNIHVYGMMRGRALAGASGDREAQIFCTHLTAELVSIAGVYWLS
+ DKIPAEFYGKAARLRLADNALTVQPLN"
+ misc_feature complement(1092321..1093025)
+ /gene="minC"
+ /locus_tag="SARI_01125"
+ /note="septum formation inhibitor; Reviewed; Region: minC;
+ PRK03511"
+ /db_xref="CDD:179585"
+ misc_feature complement(1092714..1093025)
+ /gene="minC"
+ /locus_tag="SARI_01125"
+ /note="Septum formation inhibitor MinC, N-terminal domain;
+ Region: MinC_N; pfam05209"
+ /db_xref="CDD:203206"
+ misc_feature complement(1092324..1092641)
+ /gene="minC"
+ /locus_tag="SARI_01125"
+ /note="Septum formation inhibitor MinC, C-terminal domain;
+ Region: MinC_C; pfam03775"
+ /db_xref="CDD:146423"
+ gene 1093151..1093444
+ /locus_tag="SARI_01126"
+ CDS 1093151..1093444
+ /locus_tag="SARI_01126"
+ /inference="protein motif:HMMPfam:IPR007840"
+ /inference="similar to AA sequence:INSD:CAD05496.1"
+ /note="'COG: COG3100 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570173.1"
+ /db_xref="GI:161503061"
+ /db_xref="InterPro:IPR007840"
+ /translation="MFCVIYRSSKRDQTYLYVEKKDDFSRVPEALMKGFGQPQLAMIL
+ PLDGRKKLVNAELEKVKQALREQGYYLQLPPPPEDLLKQHLSTVGQNTSHADR"
+ misc_feature 1093151..1093429
+ /locus_tag="SARI_01126"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG3100"
+ /db_xref="CDD:225642"
+ gene 1093468..1094169
+ /locus_tag="SARI_01127"
+ CDS 1093468..1094169
+ /locus_tag="SARI_01127"
+ /inference="protein motif:HMMPfam:IPR002529"
+ /inference="similar to AA sequence:INSD:AAV77032.1"
+ /note="'KEGG: bpm:BURPS1710b_A0012 1.1e-38
+ fumarylacetoacetate (FAA) hydrolase K01557;
+ COG: COG0179 2-keto-4-pentenoate
+ hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase
+ (catechol pathway);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570174.1"
+ /db_xref="GI:161503062"
+ /db_xref="InterPro:IPR002529"
+ /translation="MTLRLNFMMTLGENMYQHRNWQGALLDYPVSKVVCVGSNYANHI
+ KEMGSATPEEPVLFIKPETALCDIRQPLAIPADMGAVHHEVELAVLISATLRQATEEH
+ VRKAIAGYGVALDLTLRDIQGKMKKAGQPWEKAKGFDNACPISGFIPVAAFCGDPQNT
+ VIGLNVNGEVRQQGSTADMIHPIVPLIAYMSRYFTLKAGDVVLTGTPAGVGPLLSGDE
+ LDIRFNGEMLSTRVL"
+ misc_feature 1093486..1094142
+ /locus_tag="SARI_01127"
+ /note="2-keto-4-pentenoate
+ hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase
+ (catechol pathway) [Secondary metabolites biosynthesis,
+ transport, and catabolism]; Region: MhpD; COG0179"
+ /db_xref="CDD:223257"
+ misc_feature 1093510..1094166
+ /locus_tag="SARI_01127"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10691"
+ /db_xref="CDD:182650"
+ gene 1094247..1094708
+ /locus_tag="SARI_01128"
+ CDS 1094247..1094708
+ /locus_tag="SARI_01128"
+ /inference="protein motif:BlastProDom:IPR008228"
+ /inference="protein motif:HMMPfam:IPR005358"
+ /inference="protein motif:HMMPIR:IPR008228"
+ /inference="similar to AA sequence:SwissProt:Q8ZP12"
+ /note="'COG: COG2983 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570175.1"
+ /db_xref="GI:161503063"
+ /db_xref="InterPro:IPR005358"
+ /db_xref="InterPro:IPR008228"
+ /translation="MAETSMSDIPFWQRKTLDEMTDAEWESLCDGCGQCCLHKLMDED
+ TDEIYFTNVACRQLNIKTCQCRHYERRFEFEPDCIKLTRENLFDFAWLPMTCAYRLLA
+ EGKPLPAWHPLLTGSKAAMHGERISVRHIAVNESEVRDWQDHILNKPSWAD"
+ misc_feature 1094262..1094702
+ /locus_tag="SARI_01128"
+ /note="hypothetical protein; Provisional; Region:
+ PRK05170"
+ /db_xref="CDD:235356"
+ gene 1095059..1095196
+ /locus_tag="SARI_01129"
+ CDS 1095059..1095196
+ /locus_tag="SARI_01129"
+ /inference="similar to AA sequence:INSD:AAL20725.1"
+ /note="'COG: NOG32497 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570176.1"
+ /db_xref="GI:161503064"
+ /translation="MSERPDLVDPLPEDEPLPGDNIPDTPEGDDPLDSDTQNEVENPR
+ R"
+ gene 1095407..1095580
+ /locus_tag="SARI_01130"
+ CDS 1095407..1095580
+ /locus_tag="SARI_01130"
+ /inference="protein motif:HMMPfam:IPR012563"
+ /inference="similar to AA sequence:INSD:AAK63083.1"
+ /note="'COG: NOG18116 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570177.1"
+ /db_xref="GI:161503065"
+ /db_xref="InterPro:IPR012563"
+ /translation="MNSEELTRKAEEEIAALITKKVAEVRKKTGQEVSEIEFAPRETM
+ KGLEGYNVKIKLL"
+ misc_feature 1095407..1095568
+ /locus_tag="SARI_01130"
+ /note="GnsA/GnsB family; Region: GnsAB; pfam08178"
+ /db_xref="CDD:116767"
+ gene complement(1095656..1095997)
+ /locus_tag="SARI_01131"
+ CDS complement(1095656..1095997)
+ /locus_tag="SARI_01131"
+ /inference="protein motif:superfamily:IPR011051"
+ /inference="similar to AA sequence:INSD:AAV77036.1"
+ /note="'COG: COG3615 Uncharacterized protein/domain,
+ possibly involved in tellurite resistance;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570178.1"
+ /db_xref="GI:161503066"
+ /db_xref="InterPro:IPR011051"
+ /translation="MSHLRIPANWKVKRSTPFFTKENVPATLLSHHNTAAGVFGQLCV
+ MEGTVTYYGFANETATEPEVKVVINAGQFATSPPQYWHRVELSDDARFNIHFWVEEGH
+ QNEEMYHQKKA"
+ misc_feature complement(1095698..1095991)
+ /locus_tag="SARI_01131"
+ /note="Uncharacterized protein/domain, possibly involved
+ in tellurite resistance [Inorganic ion transport and
+ metabolism]; Region: TehB; COG3615"
+ /db_xref="CDD:226142"
+ unsure 1096006..1097101
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(1096106..1096585)
+ /locus_tag="SARI_01132"
+ CDS complement(1096106..1096585)
+ /locus_tag="SARI_01132"
+ /inference="protein motif:HMMPfam:IPR003752"
+ /inference="protein motif:HMMPIR:IPR012139"
+ /inference="similar to AA sequence:INSD:AAX65706.1"
+ /note="disulfide oxidoreductase; integral membrane
+ protein; required for perioplasmic disulfide bond
+ formation; oxidizes DsbA protein"
+ /codon_start=1
+ /transl_table=11
+ /product="disulfide bond formation protein B"
+ /protein_id="YP_001570179.1"
+ /db_xref="GI:161503067"
+ /db_xref="InterPro:IPR003752"
+ /db_xref="InterPro:IPR012139"
+ /translation="MALTAFALEMVALWFQHVMLLKPCVLCIYERCALFGVMGAGLVG
+ AIAPKTPLRYVAMVIWIYSAWRGLQLAYEHTMIQLHPSPFMTCDFVARFPDWLPLGKW
+ LPQVFVASGDCAERQWSFLTLEMPQWLLGIFAAYLVVAIAVVIAQAFKPKKRDLFGR"
+ misc_feature complement(1096112..1096585)
+ /locus_tag="SARI_01132"
+ /note="disulfide bond formation protein B; Provisional;
+ Region: PRK01749"
+ /db_xref="CDD:234979"
+ gene complement(1096778..1098322)
+ /gene="nhaB"
+ /locus_tag="SARI_01133"
+ CDS complement(1096778..1098322)
+ /gene="nhaB"
+ /locus_tag="SARI_01133"
+ /inference="protein motif:HMMPfam:IPR004671"
+ /inference="protein motif:HMMTigr:IPR004671"
+ /inference="similar to AA sequence:REFSEQ:NP_456313.1"
+ /note="involved in regulation of intracellular pH under
+ alkaline conditions"
+ /codon_start=1
+ /transl_table=11
+ /product="sodium/proton antiporter"
+ /protein_id="YP_001570180.1"
+ /db_xref="GI:161503068"
+ /db_xref="InterPro:IPR004671"
+ /translation="MEISWGRAMWRNFLGQSPDWYKLALLVFLIINPLTFFTNSFVAG
+ WLLVAEFIFTLAMALKCYPLLPGGLLAIEAVVIGMTSAAHVREEVAANLEVLLLLMFM
+ VAGIYFMKQLLLFIFTRLLLSIRSKMVLSLAFCVAAAFLSAFLDALTVVAVVISVAVG
+ FYGIYHRVASSRGEENDMLDDSHIDQHYKTVLEQFRGFLRSLMMHAGVGTALGGVMTM
+ VGEPQNLIIAKAAGWHFGDFFLRMSPVTVPVLVCGLLTCMLVEKMRWFGYGETLPEKV
+ RNVLQQFDDQSRKQRTRQDKIKLIVQAIIGVWLVTALALHLAEVGLIGLSVIILATAL
+ TGVTDEHAIGKAFTESLPFTALLTVFFSIVAVIIDQHLFAPIIQFVLQASEHAQLTLF
+ YLFNGLLSSISDNVFVGTIYINEAKAAMENGAISLKQFELLAVAINTGTNLPSVATPN
+ GQAAFLFLLTSALAPLIRLSYGRMVWMALPYTIILTLVGLLCVEFTLAPVNEWMTQAG
+ WLATLS"
+ misc_feature complement(1096850..>1097719)
+ /gene="nhaB"
+ /locus_tag="SARI_01133"
+ /note="Anion permease ArsB/NhaD. These permeases have
+ been shown to translocate sodium, arsenate, antimonite,
+ sulfate and organic anions across biological membranes in
+ all three kingdoms of life. A typical anion permease
+ contains 8-13 transmembrane helices...; Region:
+ ArsB_NhaD_permease; cd00625"
+ /db_xref="CDD:238344"
+ misc_feature complement(order(1096850..1096888,1096964..1096981,
+ 1096994..1097035,1097114..1097161,1097231..1097287,
+ 1097330..1097374,1097396..1097434,1097528..1097536,
+ 1097555..1097590,1097654..1097719))
+ /gene="nhaB"
+ /locus_tag="SARI_01133"
+ /note="transmembrane helices; other site"
+ /db_xref="CDD:238344"
+ unsure 1097922..1097971
+ /note="Sequence derived from one plasmid subclone"
+ unsure 1098370..1098549
+ /note="Sequence derived from one plasmid subclone"
+ gene 1098542..1099261
+ /locus_tag="SARI_01134"
+ CDS 1098542..1099261
+ /locus_tag="SARI_01134"
+ /inference="protein motif:Gene3D:IPR000524"
+ /inference="protein motif:HMMPfam:IPR000524"
+ /inference="protein motif:HMMPfam:IPR008920"
+ /inference="protein motif:HMMSmart:IPR000524"
+ /inference="protein motif:superfamily:IPR008920"
+ /inference="similar to AA sequence:INSD:AAL20720.1"
+ /note="Multifunctional regulator of fatty acid metabolism"
+ /codon_start=1
+ /transl_table=11
+ /product="fatty acid metabolism regulator"
+ /protein_id="YP_001570181.1"
+ /db_xref="GI:161503069"
+ /db_xref="InterPro:IPR000524"
+ /db_xref="InterPro:IPR008920"
+ /translation="MLIKAQSPAGFAEEYIIESIWNNRFPPGTILPAERELSELIGVT
+ RTTLREVLQRLARDGWLTIQHGKPTKVNNFWETSGLNILETLARLDHESVPQLIDNLL
+ SVRTNISTIFIRTALRQHPDKAQEVLATAHEVADHADAFAELDYNIFRGLAFASGNPI
+ YGLILNGMKGLYTRIGRHYFANPEARSLALGFYHKLSSLCEQGAHDQVYETVRRYGHD
+ SGEIWHRMQKNLPGDLAIQGR"
+ misc_feature 1098542..1099258
+ /locus_tag="SARI_01134"
+ /note="fatty acid metabolism regulator; Provisional;
+ Region: PRK04984"
+ /db_xref="CDD:179909"
+ misc_feature 1098581..1098757
+ /locus_tag="SARI_01134"
+ /note="Winged helix-turn-helix (WHTH) DNA-binding domain
+ of the GntR family of transcriptional regulators; Region:
+ WHTH_GntR; cd07377"
+ /db_xref="CDD:153418"
+ misc_feature order(1098635..1098637,1098641..1098646,1098668..1098682,
+ 1098686..1098691,1098698..1098700,1098728..1098733,
+ 1098737..1098748)
+ /locus_tag="SARI_01134"
+ /note="DNA-binding site [nucleotide binding]; DNA binding
+ site"
+ /db_xref="CDD:153418"
+ misc_feature 1098755..1099246
+ /locus_tag="SARI_01134"
+ /note="FadR C-terminal domain; Region: FadR_C; pfam07840"
+ /db_xref="CDD:116452"
+ gene complement(1099308..1100840)
+ /locus_tag="SARI_01135"
+ CDS complement(1099308..1100840)
+ /locus_tag="SARI_01135"
+ /inference="protein motif:HMMPfam:IPR007390"
+ /inference="similar to AA sequence:REFSEQ:YP_150352.1"
+ /note="'COG: COG2719 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="SpoVR family protein"
+ /protein_id="YP_001570182.1"
+ /db_xref="GI:161503070"
+ /db_xref="InterPro:IPR007390"
+ /translation="MVTIDSMNKDTTRLSDGPDWTFELLDVYLAEIDRVAKLYKLDTY
+ PHQIEVITSEQMMDAYSSVGMPINYPHWSFGKKFIETERLYKHGQQGLAYEIVINSNP
+ CIAYLMEENTITMQALVMAHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARHYITRC
+ EERYGVDEVEKLLDSCHALMNYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWR
+ TLPKREEEKTVAEARRFPSEPQENLLYFMEKNAPLLEPWQREILRIVRKVSQYFYPQK
+ QTQVMNEGWATFWHYTILNHLYDEGKVTERFMLEFLHNHTNVVFQPPYNSPWYSGINP
+ YALGFAMFQDIKRICQSPSDEDKYWFPDIAGSDWLETLHFAMRDFKDESFISQFLSPK
+ VMRDFRFFTVLDDDRHNYLEISAIHNEEGYREIRSRLSSQYNLSNLEPNIQVWNVDLR
+ GDRSLTLRYIPHNRAPLDKGRKEVLKHVHRLWGFDVMLEQQNEDGSVELLERCPPRMN
+ NL"
+ misc_feature complement(1099323..1100816)
+ /locus_tag="SARI_01135"
+ /note="SpoVR family protein; Provisional; Region:
+ PRK11767"
+ /db_xref="CDD:236973"
+ misc_feature complement(1099311..1100807)
+ /locus_tag="SARI_01135"
+ /note="Uncharacterized conserved protein [Function
+ unknown]; Region: SpoVR; COG2719"
+ /db_xref="CDD:225340"
+ gene 1101163..1102461
+ /locus_tag="SARI_01136"
+ CDS 1101163..1102461
+ /locus_tag="SARI_01136"
+ /inference="protein motif:BlastProDom:IPR001327"
+ /inference="protein motif:HMMPfam:IPR006076"
+ /inference="similar to AA sequence:REFSEQ:YP_150353.1"
+ /note="catalyzes the oxidative deamination of D-amino
+ acids"
+ /codon_start=1
+ /transl_table=11
+ /product="D-amino acid dehydrogenase small subunit"
+ /protein_id="YP_001570183.1"
+ /db_xref="GI:161503071"
+ /db_xref="InterPro:IPR001327"
+ /db_xref="InterPro:IPR006076"
+ /translation="MRVVILGSGVVGVTSAWYLSQAGHDVTVIDRESGPAQGTSAANA
+ GQISPGYAAPWAAPGVPLKAIKWMFQRHAPLAVRLDGTPFQLKWMWQMLRNCDTRHYM
+ ENKGRMVRLAEYSRDCLKTLRAETGIKYEGRQGGTLQLFRTARQYENATRDIAVLEDA
+ GVPYQLLESSRLAEVEPALAEVAHKLTGGLRLPNDETGDCQLFTQRLAHMAEQAGVTF
+ RFNTPVEKLLYENEQIYGVKCADEIIKADAYVMAFGSYSTAMLKGIVDIPVYPLKGYS
+ LTIPIVEPDGAPVSTILDETYKIAITRFDKRIRVGGMAEIVGFNTDLQQPRRETLEMV
+ VRDLFPRGGRIEQATFWTGLRPMTPDGTPVVGRTRFKNLWLNTGHGTLGWTMACGSGQ
+ LLSDILSGRTPAIPYDDLSIARYRSDFAPSRQQRLHSAHN"
+ misc_feature 1101163..1102407
+ /locus_tag="SARI_01136"
+ /note="D-amino acid dehydrogenase small subunit;
+ Validated; Region: PRK00711"
+ /db_xref="CDD:234819"
+ misc_feature 1101175..>1101267
+ /locus_tag="SARI_01136"
+ /note="NAD(P)-binding Rossmann-like domain; Region:
+ NAD_binding_8; pfam13450"
+ /db_xref="CDD:205628"
+ gene 1102475..1103545
+ /gene="dadX"
+ /locus_tag="SARI_01137"
+ CDS 1102475..1103545
+ /gene="dadX"
+ /locus_tag="SARI_01137"
+ /inference="protein motif:FPrintScan:IPR000821"
+ /inference="protein motif:HMMPfam:IPR001608"
+ /inference="protein motif:HMMPfam:IPR011079"
+ /inference="protein motif:HMMPIR:IPR012155"
+ /inference="protein motif:HMMTigr:IPR000821"
+ /inference="protein motif:ScanRegExp:IPR000821"
+ /inference="protein motif:superfamily:IPR009006"
+ /inference="similar to AA sequence:REFSEQ:YP_150354.1"
+ /note="'catabolic enzyme, converts L-alanine to D-alanine
+ which is then oxidized to pyruvate by dadA'"
+ /codon_start=1
+ /transl_table=11
+ /product="alanine racemase"
+ /protein_id="YP_001570184.1"
+ /db_xref="GI:161503072"
+ /db_xref="InterPro:IPR000821"
+ /db_xref="InterPro:IPR001608"
+ /db_xref="InterPro:IPR009006"
+ /db_xref="InterPro:IPR011079"
+ /db_xref="InterPro:IPR012155"
+ /translation="MTRPIQASLDLQVMKQNLSIVRRAAPEARVWSVVKANAYGHGIE
+ RVWNALSGTDGFAMLNLEEAITLRERGWKGPILMLEGFFHAQDLETYDTYRLTTCIHS
+ NWQLKALQNARLNAPLDIYVKVNSGMNRLGFQPERAQTVWQQLRAMRNVGEMTIMSHF
+ AQADHPEGIGEAMRRIALATEGIQCPYSLANSAATLWHPQAHYDWVRPGIILYGASPS
+ GQWRDIANTGLKPVMTLSSEIIGVQTLRAGEKVGYGGCYSAHQEQRIGIVAAGYADGY
+ PRHAPTGTPVLVDGIRTGTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKVDDVAA
+ AAGTLGYELLCAVAPRVPFVTM"
+ misc_feature 1102478..1103542
+ /gene="dadX"
+ /locus_tag="SARI_01137"
+ /note="alanine racemase; Reviewed; Region: dadX; PRK03646"
+ /db_xref="CDD:179622"
+ misc_feature 1102484..1103536
+ /gene="dadX"
+ /locus_tag="SARI_01137"
+ /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
+ Enzymes, Proteobacterial Alanine Racemases; Region:
+ PLPDE_III_AR_proteobact; cd06827"
+ /db_xref="CDD:143500"
+ misc_feature order(1102571..1102573,1102577..1102579,1102589..1102591,
+ 1102709..1102711,1102841..1102843,1102862..1102864,
+ 1102943..1102945,1102949..1102951,1103045..1103053,
+ 1103093..1103104,1103495..1103497)
+ /gene="dadX"
+ /locus_tag="SARI_01137"
+ /note="active site"
+ /db_xref="CDD:143500"
+ misc_feature order(1102571..1102573,1102577..1102579,1102589..1102591,
+ 1102709..1102711,1102949..1102951,1103045..1103050,
+ 1103093..1103095,1103099..1103104,1103495..1103497)
+ /gene="dadX"
+ /locus_tag="SARI_01137"
+ /note="pyridoxal 5'-phosphate (PLP) binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:143500"
+ misc_feature order(1102577..1102579,1102589..1102591,1102862..1102864,
+ 1102949..1102951,1103495..1103497)
+ /gene="dadX"
+ /locus_tag="SARI_01137"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:143500"
+ misc_feature order(1102577..1102579,1103231..1103233)
+ /gene="dadX"
+ /locus_tag="SARI_01137"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:143500"
+ misc_feature order(1103192..1103194,1103201..1103203,1103219..1103224,
+ 1103228..1103236,1103273..1103275,1103288..1103290,
+ 1103306..1103308,1103372..1103374,1103378..1103380,
+ 1103489..1103491,1103495..1103500,1103513..1103515,
+ 1103522..1103524)
+ /gene="dadX"
+ /locus_tag="SARI_01137"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:143500"
+ gene complement(1103610..1105343)
+ /locus_tag="SARI_01138"
+ CDS complement(1103610..1105343)
+ /locus_tag="SARI_01138"
+ /inference="protein motif:HMMPfam:IPR005170"
+ /inference="protein motif:HMMPfam:IPR006037"
+ /inference="protein motif:HMMPfam:IPR006153"
+ /inference="similar to AA sequence:SwissProt:Q5PN10"
+ /note="the Vibrio parahaemolyticus gene VP2867 was found
+ to be a potassium/proton antiporter; can rapidly extrude
+ potassium against a potassium gradient at alkaline pH when
+ cloned and expressed in Escherichia coli"
+ /codon_start=1
+ /transl_table=11
+ /product="potassium/proton antiporter"
+ /protein_id="YP_001570185.2"
+ /db_xref="GI:448236217"
+ /db_xref="InterPro:IPR005170"
+ /db_xref="InterPro:IPR006037"
+ /db_xref="InterPro:IPR006153"
+ /translation="MDAVTIISLFILGSILVTSSILLSSFSSRLGIPILVIFLAIGML
+ AGVDGIGGIPFDNYPFAYMVSNLALAIILLDGGMRTQASSFRVALGPALSLATLGVLI
+ TSGLTGMMAAWLFHLNLIEGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGS
+ NDPMAVFLTITLIEMIQKHETGLDWMFAVHIIQQFGLGIVFGLGGGYLLQQMINRISL
+ PSGLYPMLALSGGILIFALTTALEGSGILAVYLCGFLLGNRPIRNRYGILQNFDGLAW
+ LAQIAMFLVLGLLVTPSDLWPIAVPALILSLWMIFFARPLSVFTGLLPFRGFNFRERI
+ FISWVGLRGAVPIILAVFPMMAGLENARLFFNVAFFVVLVSLLLQGTSLSWAAKRAKV
+ VVPPVGWPVSRVGLDIHPDNPWEQFIYQLSADKWCVGAALRDLHMPNETRIAALFRNN
+ ELFHPTGSTRLREGDVLCVIGRERDLPALGKLFSQSPPVSLDQRFFGDFILEANAKFA
+ DVALIYGLEEGMEYRDKQQTLGEIIQQLLGAAPVVGDQVEFGGMIWTVAEKEDNVVRK
+ IGVRVAEDEAE"
+ misc_feature complement(1103613..1105340)
+ /locus_tag="SARI_01138"
+ /note="NhaP-type Na+/H+ and K+/H+ antiporters with a
+ unique C-terminal domain [Inorganic ion transport and
+ metabolism]; Region: COG3263"
+ /db_xref="CDD:225802"
+ misc_feature complement(<1104759..1105247)
+ /locus_tag="SARI_01138"
+ /note="Kef-type K+ transport systems, membrane components
+ [Inorganic ion transport and metabolism]; Region: KefB;
+ cl10482"
+ /db_xref="CDD:245312"
+ misc_feature complement(1103892..1104095)
+ /locus_tag="SARI_01138"
+ /note="TrkA-C domain; Region: TrkA_C; pfam02080"
+ /db_xref="CDD:216867"
+ misc_feature complement(1103634..1103870)
+ /locus_tag="SARI_01138"
+ /note="Transporter associated domain; Region: CorC_HlyC;
+ smart01091"
+ /db_xref="CDD:215020"
+ gene complement(1105440..1106354)
+ /gene="ldcA"
+ /locus_tag="SARI_01139"
+ CDS complement(1105440..1106354)
+ /gene="ldcA"
+ /locus_tag="SARI_01139"
+ /inference="protein motif:HMMPfam:IPR003507"
+ /inference="similar to AA sequence:INSD:CAD05483.1"
+ /note="catalyzes the release of D-alanine from
+ L-alanyl-D-glutamyl-meso-diaminopimelyl-D-alanine"
+ /codon_start=1
+ /transl_table=11
+ /product="L,D-carboxypeptidase A"
+ /protein_id="YP_001570186.1"
+ /db_xref="GI:161503074"
+ /db_xref="InterPro:IPR003507"
+ /translation="MSLFHLIAPSGYCINQQAALRGVQRLTDAGHQVENDKVIRRRYQ
+ RFAGTDAERLADVNSLASLTTPNTIVMPVRGGYGASRLLDRIDWQAIASRQQRDPLLI
+ CGHSDFTAIQAGLLAQANVITFSGPMLAANFGAETLNAFTERHFWLALRNAQFTLQWQ
+ GDGPQCDAQGTLWGGNLAMLISLIGTPWMPTIDKGILVLEDINEHPFRVERMLLQLEY
+ AGILNRQSAIILGSFSGAAPNEYDAGYSLESVYAFLRSRLSVPLITGLDFGHEQRTVT
+ LPVGANATLKNTRQSTQLTVSGHPTLQL"
+ misc_feature complement(1105503..1106342)
+ /gene="ldcA"
+ /locus_tag="SARI_01139"
+ /note="LD-Carboxypeptidase, a serine protease, includes
+ microcin C7 self immunity protein; Region: Peptidase_S66;
+ cd07025"
+ /db_xref="CDD:132882"
+ misc_feature complement(order(1105593..1105598,1105710..1105715,
+ 1105722..1105727,1105731..1105736,1105800..1105805,
+ 1105809..1105814,1106112..1106117))
+ /gene="ldcA"
+ /locus_tag="SARI_01139"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:132882"
+ misc_feature complement(order(1105545..1105547,1105755..1105757,
+ 1106037..1106039))
+ /gene="ldcA"
+ /locus_tag="SARI_01139"
+ /note="catalytic triad [active]"
+ /db_xref="CDD:132882"
+ gene 1106594..1107205
+ /locus_tag="SARI_01140"
+ CDS 1106594..1107205
+ /locus_tag="SARI_01140"
+ /inference="protein motif:HMMPfam:IPR008258"
+ /inference="protein motif:ScanRegExp:IPR000189"
+ /inference="similar to AA sequence:INSD:AAL20714.1"
+ /note="'KEGG: stm:STM1799 1.1e-86 emtA; membrane-bound
+ lytic murein transglycosylase E K08308;
+ COG: COG0741 Soluble lytic murein transglycosylase and
+ related regulatory proteins (some contain LysM/invasin
+ domains);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="membrane-bound lytic murein transglycosylase E"
+ /protein_id="YP_001570187.2"
+ /db_xref="GI:448236218"
+ /db_xref="InterPro:IPR000189"
+ /db_xref="InterPro:IPR008258"
+ /translation="MKLRWFAFLVVILAGCSSKQDYRNPPWNAEVPVKRAMQWMPISE
+ KAGAAWGVDPHLITAIIAIESGGNPNAVSKSNAIGLMQLKASTSGRDVYRRMGWRGEP
+ TTSELKNPERNISMGAAYLSILENGPLAGIKDPQVMQYALVVSYANGAGALLRTFSSD
+ RKKAIEKINDLDADEFFEHVVDNHPAPQAPRYIWKLQQALDAM"
+ misc_feature 1106594..1107202
+ /locus_tag="SARI_01140"
+ /note="lytic murein endotransglycosylase E; Provisional;
+ Region: emtA; PRK15470"
+ /db_xref="CDD:185367"
+ misc_feature 1106753..1107082
+ /locus_tag="SARI_01140"
+ /note="Lytic Transglycosylase (LT) and Goose Egg White
+ Lysozyme (GEWL) domain. Members include the soluble and
+ insoluble membrane-bound LTs in bacteria, the LTs in
+ bacteriophage lambda, as well as, the eukaryotic
+ "goose-type" lysozymes (GEWL). LTs...; Region:
+ LT_GEWL; cd00254"
+ /db_xref="CDD:238157"
+ misc_feature order(1106783..1106785,1106843..1106845,1106951..1106953,
+ 1107029..1107031)
+ /locus_tag="SARI_01140"
+ /note="N-acetyl-D-glucosamine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:238157"
+ misc_feature 1106783..1106785
+ /locus_tag="SARI_01140"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:238157"
+ gene complement(1107219..1107953)
+ /locus_tag="SARI_01141"
+ CDS complement(1107219..1107953)
+ /locus_tag="SARI_01141"
+ /inference="protein motif:HMMPfam:IPR009875"
+ /inference="protein motif:HMMPfam:IPR009926"
+ /inference="similar to AA sequence:INSD:AAL20713.1"
+ /note="'COG: COG5581 Predicted glycosyltransferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570188.1"
+ /db_xref="GI:161503076"
+ /db_xref="InterPro:IPR009875"
+ /db_xref="InterPro:IPR009926"
+ /translation="MSRYNEQFLKKNPLAILGVLRDLNKNQVPLRISWAKGQFISKIL
+ AVAPEKLIVDYGSQEYENSAVLRAGQVDIIAETQGAKVEFTLPRFVTGYYQQLPAFIT
+ PLPSSLWFVQRREYFRIGAPLYPPYYGVTTLPDTRTLRFRLFDLSLGGMGALLESAIP
+ DGLIEGARFSQVELNMGQWGIFHVDAQLIAISERKVIDGKNETITTPRLSFRFLNVSP
+ AVERELQRIIFTLERDARERANKVRE"
+ misc_feature complement(1107228..1107953)
+ /locus_tag="SARI_01141"
+ /note="c-di-GMP-binding protein [Signal transduction
+ mechanisms]; Region: COG5581"
+ /db_xref="CDD:227868"
+ misc_feature complement(1107621..1107935)
+ /locus_tag="SARI_01141"
+ /note="Flagellar regulator YcgR; Region: YcgR; pfam07317"
+ /db_xref="CDD:115941"
+ misc_feature complement(1107267..1107620)
+ /locus_tag="SARI_01141"
+ /note="PilZ domain; Region: PilZ; pfam07238"
+ /db_xref="CDD:219344"
+ gene 1108125..1108379
+ /locus_tag="SARI_01142"
+ CDS 1108125..1108379
+ /locus_tag="SARI_01142"
+ /inference="protein motif:HMMPfam:IPR007341"
+ /inference="similar to AA sequence:INSD:AAV77046.1"
+ /note="'KEGG: cjk:jk1171 0.00073 cdsA; phosphatidate
+ cytidylyltransferase K00981;
+ COG: COG2261 Predicted membrane protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570189.1"
+ /db_xref="GI:161503077"
+ /db_xref="InterPro:IPR007341"
+ /translation="MGIIAWIVFGLIAGVIAKLLMPGRDGGGFILTCILGIVGAVVGG
+ WLATMFGIGGSISGFNLHSFLVAVVGAIVVLVIFRFLRRN"
+ misc_feature 1108125..>1108313
+ /locus_tag="SARI_01142"
+ /note="Transglycosylase associated protein; Region:
+ Transgly_assoc; cl00978"
+ /db_xref="CDD:242229"
+ gene complement(1108443..1110155)
+ /gene="treA"
+ /locus_tag="SARI_01143"
+ CDS complement(1108443..1110155)
+ /gene="treA"
+ /locus_tag="SARI_01143"
+ /inference="protein motif:HMMPfam:IPR001661"
+ /inference="protein motif:ScanRegExp:IPR001661"
+ /inference="protein motif:superfamily:IPR008928"
+ /note="periplasmic; catalyzes the hydrolysis of trehalose
+ to glucose which can then be imported into the cell"
+ /codon_start=1
+ /transl_table=11
+ /product="trehalase"
+ /protein_id="YP_001570190.1"
+ /db_xref="GI:161503078"
+ /db_xref="InterPro:IPR001661"
+ /db_xref="InterPro:IPR008928"
+ /translation="MIPPEIRRTVLLQKAIKLALAGTLLTFAAFSATAADPSSETETP
+ PPPDILLGPLFNDVQNAKLFPDQKTFADAIPNSDPLMILADYRMQRNQSGFDLRHFVN
+ VNFTLPKAGEKYVPPTGQSLREHIDGLWPVLTRSTTHVEKWDSLLPLPESYVIPGGRF
+ REIYYWDSYFTMLGLAESGHWDKVADMVANFGYEIDAWGHIPNGNRTYYQSRSQPPFF
+ AFMVELLAQHEGDDALKEYLPQLQKEYAYWMEGVDTLQPGQQNQRVVKLEDGSVLNRY
+ WDDRDTPRPESWVEDIATAKSNPNRPATEIYRDLRAAAASGWDFSSRWMDNPEQLSTI
+ RTTTIVPVDLNALLYKLEKTLARASVAAGDQAKASQYDALANARQKAIEMHLWNSKEG
+ WYTDYDLKNNKIRNQLTAAALFPLYVNAAAKERAAKVAAATQAHLLQPGGLATTSVKS
+ GQQWDAPNGWAPLQWVATEGLQNYGQDNVAMEVTWRFLTNVQHTYDREKKLVEKYDVS
+ STGTGGGGGEYPLQDGFGWTNGVTLKMLDLICPQKKPCDSVPSTRPASLSATPTKASS
+ AATQ"
+ misc_feature complement(1108494..1110155)
+ /gene="treA"
+ /locus_tag="SARI_01143"
+ /note="trehalase; Provisional; Region: treA; PRK13271"
+ /db_xref="CDD:237326"
+ misc_feature complement(1108521..1110011)
+ /gene="treA"
+ /locus_tag="SARI_01143"
+ /note="Neutral trehalase [Carbohydrate transport and
+ metabolism]; Region: TreA; COG1626"
+ /db_xref="CDD:224541"
+ gene complement(1110370..1111695)
+ /locus_tag="SARI_01144"
+ CDS complement(1110370..1111695)
+ /locus_tag="SARI_01144"
+ /inference="protein motif:FPrintScan:IPR006095"
+ /inference="protein motif:HMMPfam:IPR006096"
+ /inference="protein motif:HMMPfam:IPR006097"
+ /inference="protein motif:ScanRegExp:IPR000209"
+ /inference="protein motif:ScanRegExp:IPR006095"
+ /inference="similar to AA sequence:REFSEQ:NP_460751.1"
+ /note="'KEGG: stm:STM1795 3.8e-235 putative glutamic
+ dehyrogenase-like protein K00261;
+ COG: COG0334 Glutamate dehydrogenase/leucine
+ dehydrogenase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570191.1"
+ /db_xref="GI:161503079"
+ /db_xref="InterPro:IPR000209"
+ /db_xref="InterPro:IPR006095"
+ /db_xref="InterPro:IPR006096"
+ /db_xref="InterPro:IPR006097"
+ /translation="MYHGQLKNILLLSLRFIMDKLSYASDSSTSAWNTYLQQIERVAP
+ YLGELSRWVDTLRHPKRALIVDIPVQMDDGTIRHFEGYRVQHNLSRGPGKGGVRYHPD
+ VDLNEVMALSAWMTIKCAALNLPYGGAKGGIRVDPFSLSEGELERLTRRYTSEIGIII
+ GPQKDIPAPDVGTNGKVMAWMMDTYSMNHGTTVTGVVTGKPIHLGGSLGREKATGRGV
+ FVSGLEAARRANIAVEGARVAVQGFGNVGSEAARLFAGAGARVVAIQDHTATLFNATG
+ IDMKALTAWQIEHKQIAGFPGAETIASDAFWSLEMDILIPAALEGQITRQRAEVLTCK
+ LVLEGANGPTYPDADDVLASRGILVVPDVVCNAGGVTVSYFEWVQDMASFFWSEEEIN
+ ARMDKIMTDAIVHVWEKAAEKSCSLRTAAYIVACERILLARKDRGIYPG"
+ misc_feature complement(1110379..1111611)
+ /locus_tag="SARI_01144"
+ /note="Glutamate dehydrogenase/leucine dehydrogenase
+ [Amino acid transport and metabolism]; Region: GdhA;
+ COG0334"
+ /db_xref="CDD:223411"
+ misc_feature complement(1111135..1111521)
+ /locus_tag="SARI_01144"
+ /note="Glu/Leu/Phe/Val dehydrogenase, dimerisation domain;
+ Region: ELFV_dehydrog_N; pfam02812"
+ /db_xref="CDD:202408"
+ misc_feature complement(1110409..1111083)
+ /locus_tag="SARI_01144"
+ /note="NAD(P) binding domain of glutamate dehydrogenase,
+ subgroup 1; Region: NAD_bind_1_Glu_DH; cd01076"
+ /db_xref="CDD:133445"
+ misc_feature complement(order(1110673..1110681,1110739..1110744,
+ 1110895..1110900,1110958..1110966))
+ /locus_tag="SARI_01144"
+ /note="NAD(P) binding site [chemical binding]; other site"
+ /db_xref="CDD:133445"
+ gene complement(1112142..1113278)
+ /locus_tag="SARI_01145"
+ CDS complement(1112142..1113278)
+ /locus_tag="SARI_01145"
+ /inference="protein motif:HMMPfam:IPR003317"
+ /inference="protein motif:HMMTigr:IPR003317"
+ /inference="similar to AA sequence:INSD:AAO68748.1"
+ /note="'KEGG: sty:STY1921 2.8e-198 appB; probable
+ cytochrome oxidase subunit II K00426;
+ COG: COG1294 Cytochrome bd-type quinol oxidase, subunit 2;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570192.1"
+ /db_xref="GI:161503080"
+ /db_xref="InterPro:IPR003317"
+ /translation="MLDYETLRFIWWLLIGVILVAFMVTDGFDMGVGCLLPLIARSDD
+ ERRVLINSVGAHWEGNQVWLILAGGALFAAWPRVYAAAFSGFYVAMILVLCALFFRPL
+ AFDYRGKIANARWRALWDTGLVIGSLVPPVVFGIVFGNLFLGVPFAFTPQLHVDYFGT
+ FWQLFSPFALLCGLLSLSLVIMQGGVWLQLKTEGVIRQRALSATRHSALLVVICFLLA
+ GYWLWAGIDGFVLLAQDANGPSNPLLKGVAILPGAWMNHFIRSPLLLIIPLLGMVLPI
+ LTFYACLRGQTIRGFLFASLTQASVIFTAGITLFPFVMPSSVNPLSSLTVWDSTSSQM
+ TLEIMLVIVLIFLPIVLLYTLWSYYKMLGRIDQETLRRNDHELY"
+ misc_feature complement(1112145..1113278)
+ /locus_tag="SARI_01145"
+ /note="cytochrome bd-II oxidase subunit 2; Provisional;
+ Region: PRK15028"
+ /db_xref="CDD:184988"
+ misc_feature complement(1112160..1113278)
+ /locus_tag="SARI_01145"
+ /note="Cytochrome bd-type quinol oxidase, subunit 2
+ [Energy production and conversion]; Region: AppB; COG1294"
+ /db_xref="CDD:224213"
+ gene complement(1113290..1114834)
+ /locus_tag="SARI_01146"
+ CDS complement(1113290..1114834)
+ /locus_tag="SARI_01146"
+ /inference="protein motif:HMMPfam:IPR002585"
+ /inference="similar to AA sequence:REFSEQ:NP_460748.1"
+ /note="'KEGG: stm:STM1792 2.3e-274 putative cytochrome
+ oxidase, subunit I K00425;
+ COG: COG1271 Cytochrome bd-type quinol oxidase, subunit 1;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570193.1"
+ /db_xref="GI:161503081"
+ /db_xref="InterPro:IPR002585"
+ /translation="MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAVMETIYVVTG
+ KTVYRDMTRFWGKLFGINFALGVATGLTMEFQFGTNWSLYSNYVGDIFGAPLAMEALL
+ AFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNISALWILNANGWMQYPTGARFN
+ IDTLRMEMSSFSELVFNPVSQVKFVHTVMSGYVTGAMFIMSISAWYLLRGREREVALR
+ SFAIGSVFGTLAILGTLQLGDSSAYEVARVQPVKLAAMEGEWQTEPAPAPFHLIAWPL
+ QEQERNAFAVKIPALLGILATHSLDTPVPGLKNLMDDALPRLKRGREAWLLMQEIAQG
+ NRSPQVLNAFHAVEGDLGYGILLAKYAPDMNHVTPEQYRAAQRGAIPEVAPVFWSFRI
+ MVGCGSLLLVVMFIALIQTLRMRIDQHRWVLRMALWSLPLPWIAIEAGWFMTEFGRQP
+ WAIQDILPTWYAHSALTPGQLAFSMGLILGLYTLFLIAEVYLMQKYARLGPSAMQRQL
+ QTQQQG"
+ misc_feature complement(1113293..1114834)
+ /locus_tag="SARI_01146"
+ /note="cytochrome bd-II oxidase subunit 1; Provisional;
+ Region: PRK15035"
+ /db_xref="CDD:184995"
+ misc_feature complement(1113320..1114834)
+ /locus_tag="SARI_01146"
+ /note="cytochrome d terminal oxidase subunit 1;
+ Provisional; Region: PRK15097"
+ /db_xref="CDD:185052"
+ gene complement(1114909..1115757)
+ /locus_tag="SARI_01147"
+ CDS complement(1114909..1115757)
+ /locus_tag="SARI_01147"
+ /inference="protein motif:HMMPfam:IPR006894"
+ /inference="similar to AA sequence:INSD:AAX65692.1"
+ /note="'KEGG: eci:UTI89_C1045 6.6e-112 hyaF; hydrogenase-1
+ operon protein HyaF K03618;
+ COG: NOG06279 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570194.1"
+ /db_xref="GI:161503082"
+ /db_xref="InterPro:IPR006894"
+ /translation="MSNAFFHLLGPGTQPDDASFSMNPLPLTCQVNGDPSMAALEHCA
+ HSQAVMALLTDLRRQLARRIPEVGDVLGWELSPLNADDLSFLNTLLGEGEVSVRIQHP
+ DGSESEIQETIFCGLWRVRHLHNRRLLTDRLEAGSAPLTLWQAATADTLPDDTLLPPP
+ VAGLMNGLPLAHELLAHVRDPAMQPHSINLTQLPLSEADRLFLARLCGHGNIQIRISG
+ YGESQINATALRHLWHVRCLDALKGLLLDSYEICPLPELVLAAPEDLADSRQRLDEVC
+ RWLETR"
+ misc_feature complement(<1115341..1115613)
+ /locus_tag="SARI_01147"
+ /note="HupH hydrogenase expression protein, C-terminal
+ conserved region; Region: HupH_C; pfam04809"
+ /db_xref="CDD:147123"
+ misc_feature complement(1114918..1115271)
+ /locus_tag="SARI_01147"
+ /note="HupH hydrogenase expression protein, C-terminal
+ conserved region; Region: HupH_C; pfam04809"
+ /db_xref="CDD:147123"
+ gene complement(1115754..1116158)
+ /locus_tag="SARI_01148"
+ CDS complement(1115754..1116158)
+ /locus_tag="SARI_01148"
+ /inference="protein motif:Gene3D:IPR012335"
+ /inference="protein motif:HMMPfam:IPR010893"
+ /inference="protein motif:superfamily:IPR012336"
+ /inference="similar to AA sequence:REFSEQ:NP_456299.1"
+ /note="involved in processing hydrogenase proteins HyaA
+ and HyaB"
+ /codon_start=1
+ /transl_table=11
+ /product="hydrogenase-1 operon protein HyaE"
+ /protein_id="YP_001570195.1"
+ /db_xref="GI:161503083"
+ /db_xref="InterPro:IPR010893"
+ /db_xref="InterPro:IPR012335"
+ /db_xref="InterPro:IPR012336"
+ /translation="MANDTPFSALWQRLLTRGWQPVEASTVDDWIKQVGDGVILLSRD
+ PRRTPEVSDNPVMIAELLREFPQFDWQVAVADLEQSEAIGDRFNVRRFPATLVFTDGE
+ LRGALSGIHPWAELLTLMRSMVDTPAAQEAAQ"
+ misc_feature complement(1115802..1116143)
+ /locus_tag="SARI_01148"
+ /note="HyaE family; HyaE is also called HupG and HoxO.
+ They are proteins serving a critical role in the assembly
+ of multimeric [NiFe] hydrogenases, the enzymes that
+ catalyze the oxidation of molecular hydrogen to enable
+ microorganisms to utilize hydrogen as the...; Region:
+ HyaE; cd02965"
+ /db_xref="CDD:239263"
+ gene complement(1116148..1116744)
+ /locus_tag="SARI_01149"
+ CDS complement(1116148..1116744)
+ /locus_tag="SARI_01149"
+ /inference="protein motif:FPrintScan:IPR000671"
+ /inference="protein motif:Gene3D:IPR000671"
+ /inference="protein motif:HMMPfam:IPR000671"
+ /inference="protein motif:HMMPIR:IPR000671"
+ /inference="protein motif:HMMTigr:IPR000671"
+ /inference="protein motif:HMMTigr:IPR004419"
+ /inference="protein motif:HMMTigr:IPR006227"
+ /inference="similar to AA sequence:REFSEQ:YP_150366.1"
+ /note="HyaD; endopeptidase involved in the cleavage of the
+ C-terminus end of HyaB (the large subunit of hydrogenase
+ 1)"
+ /codon_start=1
+ /transl_table=11
+ /product="hydrogenase 1 maturation protease"
+ /protein_id="YP_001570196.1"
+ /db_xref="GI:161503084"
+ /db_xref="InterPro:IPR000671"
+ /db_xref="InterPro:IPR004419"
+ /db_xref="InterPro:IPR006227"
+ /translation="MNAQRVVVMGLGNLLWADEGFGIRVAERLYARYHWPEEVDIVDG
+ GTQGLNLLGYVEQASHLLLLDAIDYGLAPGSLRTYAGEKIPAYLSAKKMSLHQNSFSE
+ VLALADIRGHLPCHIALVGLQPALLDDYGGSLTEIARAQLPAAEQAALEQLAAWGIVP
+ QANEAARCLNYECLSMENYEGVRIRQYQTRLEGKRSGE"
+ misc_feature complement(1116340..1116729)
+ /locus_tag="SARI_01149"
+ /note="Endopeptidases belonging to membrane-bound
+ hydrogenases group. These hydrogenases transfer electrons
+ from H2 to a cytochrome that is bound to a
+ membrane-located complex coupling electron transfer to
+ transmembrane proton translocation. Endopeptidase HybD...;
+ Region: H2MP_MemB-H2up; cd06062"
+ /db_xref="CDD:99873"
+ misc_feature complement(order(1116610..1116618,1116664..1116666,
+ 1116706..1116708))
+ /locus_tag="SARI_01149"
+ /note="putative substrate-binding site; other site"
+ /db_xref="CDD:99873"
+ misc_feature complement(order(1116457..1116459,1116550..1116552,
+ 1116688..1116690))
+ /locus_tag="SARI_01149"
+ /note="nickel binding site [ion binding]; other site"
+ /db_xref="CDD:99873"
+ gene complement(1116741..1117472)
+ /locus_tag="SARI_01150"
+ CDS complement(1116741..1117472)
+ /locus_tag="SARI_01150"
+ /inference="protein motif:BlastProDom:IPR000516"
+ /inference="protein motif:HMMPfam:IPR011577"
+ /inference="protein motif:HMMTigr:IPR000516"
+ /inference="protein motif:ScanRegExp:IPR000516"
+ /inference="similar to AA sequence:REFSEQ:YP_150367.1"
+ /note="'KEGG: eci:UTI89_C1042 5.3e-110 hyaC; probable
+ Ni/Fe-hydrogenase 1 B-type cytochrome subunit K03620;
+ COG: COG1969 Ni,Fe-hydrogenase I cytochrome b subunit;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hydrogenase 1 b-type cytochrome subunit"
+ /protein_id="YP_001570197.1"
+ /db_xref="GI:161503085"
+ /db_xref="InterPro:IPR000516"
+ /db_xref="InterPro:IPR011577"
+ /translation="MTGKQSPRVGEARDTVVSHYVFEAPVRLWHWLTVACMLVLMVTG
+ YFIGRPLPSVSGEATYLFYMGYIRLIHFAAAMIFTVLLLGRIYWACVGNRYSRELFIV
+ PVWRRSWWQGAFSVVRWYLFLEKKPGSDIGHNPVAQAAMFGYFLLSVFMILTGFALFG
+ EHSQYAIFAPFRYVVEFFYWTGGNSIDIHSWHRLGMWLIAAFIVGHVYLAIREDIMSD
+ DTVISTMINGYRSHKFPKPHDKETS"
+ misc_feature complement(1116777..1117469)
+ /locus_tag="SARI_01150"
+ /note="Thiosulfate reductase cytochrome B subunit
+ (membrane anchoring protein) [Energy production and
+ conversion]; Region: COG4117"
+ /db_xref="CDD:226602"
+ misc_feature complement(1116744..1117448)
+ /locus_tag="SARI_01150"
+ /note="hydrogenase 1 b-type cytochrome subunit;
+ Provisional; Region: PRK10171"
+ /db_xref="CDD:182282"
+ gene complement(1117491..1119284)
+ /locus_tag="SARI_01151"
+ CDS complement(1117491..1119284)
+ /locus_tag="SARI_01151"
+ /inference="protein motif:HMMPfam:IPR001501"
+ /inference="protein motif:ScanRegExp:IPR001501"
+ /note="involved in hydrogen cycling during fermentative
+ growth"
+ /codon_start=1
+ /transl_table=11
+ /product="hydrogenase 1 large subunit"
+ /protein_id="YP_001570198.1"
+ /db_xref="GI:161503086"
+ /db_xref="InterPro:IPR001501"
+ /translation="MSNQYQTQGYTVNNAGRRLIVDPITRIEGHMRCEVNIDEQNVIT
+ NAVSCGTMFRGLEIILQGRDPRDAWAFVERICGVCTGVHALASVYAIEDAIGIQVPDN
+ ANIIRNIMLATLWCHDHLVHFYQLAGMDWIDVLNALKADPRATSQLAQSLSAWPMSSP
+ GYFFDVQNRLKKFVDGGQLGIFRNGYWGHPQYKLSPEANLMGFAHYLEALDFQREIVK
+ IHTIFGGKNPHPNWIVGGMPCAINLDQSGAVGAINMERLNLVQSIITRTADFINNVMV
+ PDALAIGQFNKAWSQIGTGLSDKCVLSYGAFPDIANDFSQQSLLMPGGAVVNGDFKNV
+ MPVDLADPQQIQEFVDHAWYRYPDDQLGRHPFDGITDPWYNPGDVKGSDTHIQQLNEQ
+ ERYSWIKAPRWRGHAMEVGPLARTLIAYHKGDAATIESVDRMMSALKLPLAGIQSTLG
+ RILCRAHEAQWAVSKLQYFFDRLMTNLKNGDRTTANTEKWEPVSWPQHCRGIGFTEAP
+ RGALGHWASIRDQKIELYQCVVPTTWNASPRDPKKQIGAYEAALMGTQMAIPDQPLEI
+ LRTLHSFDPCLACSTHVLGDDGSELIAVQVR"
+ misc_feature complement(1117494..1119284)
+ /locus_tag="SARI_01151"
+ /note="hydrogenase 1 large subunit; Provisional; Region:
+ PRK10170"
+ /db_xref="CDD:182281"
+ misc_feature complement(1117494..1119239)
+ /locus_tag="SARI_01151"
+ /note="Ni,Fe-hydrogenase I large subunit [Energy
+ production and conversion]; Region: HyaB; COG0374"
+ /db_xref="CDD:223451"
+ gene complement(1119281..1120399)
+ /locus_tag="SARI_01152"
+ CDS complement(1119281..1120399)
+ /locus_tag="SARI_01152"
+ /inference="protein motif:FPrintScan:IPR001821"
+ /inference="protein motif:HMMPfam:IPR006137"
+ /inference="protein motif:HMMPfam:IPR013634"
+ /inference="protein motif:HMMTigr:IPR001821"
+ /inference="protein motif:HMMTigr:IPR006311"
+ /inference="similar to AA sequence:INSD:AAL20701.1"
+ /note="'KEGG: stm:STM1786 1.1e-205 hydrogenase small chain
+ K06282;
+ COG: COG1740 Ni,Fe-hydrogenase I small subunit;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570199.1"
+ /db_xref="GI:161503087"
+ /db_xref="InterPro:IPR001821"
+ /db_xref="InterPro:IPR006137"
+ /db_xref="InterPro:IPR006311"
+ /db_xref="InterPro:IPR013634"
+ /translation="MNNEETFYQAMRRKGVTRRSFLKFCSLAATSLGLGAGMTPKIAW
+ ALENKPRIPVVWIHGLECTCCTESFIRSSHPLAKDVILSLISLDYDDTLMAAAGAQAE
+ EVFDDITTRYAGKYILAVEGNPPLGEQGMFCISGGRPFIEKLKKAAAGASAIIAWGNC
+ ASWGCVQAARPNPTQATPIDKVITDKPIVKVPGCPPIPDVMSAIITYIVTFDRLPELD
+ RMGRPLMFYGQRIHDKCYRRAHFDAGEFVESWDDDAARKGYCLYKMGCKGPTTYNACS
+ STRWNGGVSFPIQSGHGCLGCSENGFWDRGSFYSRVVDIPQMGTHSTADTVGLTALGV
+ VAAGVGGHAVASALNQRKRHKQQLAQAEQQPDNEDKQA"
+ misc_feature complement(1119329..1120396)
+ /locus_tag="SARI_01152"
+ /note="hydrogenase (NiFe) small subunit (hydA); Region:
+ hydA; TIGR00391"
+ /db_xref="CDD:232952"
+ misc_feature complement(1120265..1120354)
+ /locus_tag="SARI_01152"
+ /note="Tat (twin-arginine translocation) pathway signal
+ sequence; Region: TAT_signal_seq; TIGR01409"
+ /db_xref="CDD:233399"
+ misc_feature complement(1119776..1120216)
+ /locus_tag="SARI_01152"
+ /note="NADH ubiquinone oxidoreductase, 20 Kd subunit;
+ Region: Oxidored_q6; pfam01058"
+ /db_xref="CDD:216271"
+ gene 1120580..1120711
+ /locus_tag="SARI_01153"
+ CDS 1120580..1120711
+ /locus_tag="SARI_01153"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570200.1"
+ /db_xref="GI:161503088"
+ /translation="MTGINNAKSVGMAYYGIFMAIIGFSAKGEALGMKMALQRTWSC"
+ gene 1121149..1121274
+ /locus_tag="SARI_01154"
+ CDS 1121149..1121274
+ /locus_tag="SARI_01154"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570201.1"
+ /db_xref="GI:161503089"
+ /translation="MYLIIKIFIYIDVTSTKLEANIFISVEVDFKAVIVFLTPAL"
+ gene complement(1121375..1122967)
+ /locus_tag="SARI_01155"
+ CDS complement(1121375..1122967)
+ /locus_tag="SARI_01155"
+ /inference="protein motif:HMMPfam:IPR000917"
+ /inference="similar to AA sequence:INSD:CAH22312.1"
+ /note="'KEGG: yps:YPTB3074 3.1e-256 putative sulfatase;
+ COG: COG3119 Arylsulfatase A and related enzymes;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570202.1"
+ /db_xref="GI:161503090"
+ /db_xref="InterPro:IPR000917"
+ /translation="MIINPHPSGVKNMSLTRRNLLKGLAASSALGATAATGLSVTHTA
+ DTATTTQKIIKKPNLLIVFPDEMRAQSLGFMGQDQSVTPFIDRFASQSVVLRQAVSNY
+ PLCTPFRGMLMTGQYPYRNGLQGNCHTGAHGNFGGKDFGIELKKEAITWSDILKKQGF
+ SMGYIGKWHLDAPEAPFVPSYNNPIEGRYWNDWTPPEKRHGFDFWYSYGTYDLHLNPI
+ YWSNDTPRDNPLRINQWSPEHEADMAIKYLRNEGGKYRNSNEPFALVVSMNPPHSPYD
+ QVPQKYLDRFKDQTSRSMNKRPNVVWDKTYQEGYGPEYFKEYMAMINGVDEQFGRILT
+ ELERLKLDKDTLVVFFSDHGCCMGSNGQPTKNVHYEEAMRIPMMFRWPGKLPACQDDL
+ LFSAPDIYPTLLGLMGLGEHIPDSVEGTDFSKTLMGHPGDKRPTSQFYTFMPYGGQSY
+ GRRGVRTERYTLVIDRKIGQPLTYILHDNKNDPYQMENIALNNMSLVNKLITEELIPW
+ LEHSGDVWRPTEVSANAVNAYI"
+ misc_feature complement(1121498..1122805)
+ /locus_tag="SARI_01155"
+ /note="Arylsulfatase A and related enzymes [Inorganic ion
+ transport and metabolism]; Region: AslA; COG3119"
+ /db_xref="CDD:225661"
+ misc_feature complement(1121663..1122805)
+ /locus_tag="SARI_01155"
+ /note="Sulfatase; Region: Sulfatase; cl17466"
+ /db_xref="CDD:248020"
+ gene complement(1123476..1123631)
+ /locus_tag="SARI_01156"
+ CDS complement(1123476..1123631)
+ /locus_tag="SARI_01156"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570203.1"
+ /db_xref="GI:161503091"
+ /translation="MSPYETKQIPFVWTRIKINILTFTFKWKKTKVMISFTKFRQFDH
+ TFTKPDA"
+ gene 1123658..1124410
+ /locus_tag="SARI_01157"
+ CDS 1123658..1124410
+ /locus_tag="SARI_01157"
+ /inference="protein motif:FPrintScan:IPR001034"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR001034"
+ /inference="protein motif:HMMSmart:IPR001034"
+ /inference="similar to AA sequence:REFSEQ:ZP_00796095.1"
+ /note="'COG: COG1349 Transcriptional regulators of sugar
+ metabolism;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570204.1"
+ /db_xref="GI:161503092"
+ /db_xref="InterPro:IPR001034"
+ /db_xref="InterPro:IPR011991"
+ /translation="MEILEVITRQGKARVEDLAERFNVSSVTIRSDLSFLEKNGYIVR
+ SHGSAIPNVGVIAELTVNEKSRRNSDVKSLIGWAAAKLINNGDTVILDSGTTTREIAA
+ NLKSVENVVVMTNGLDVAVELASAPGVEVLISGGVLRKSAMSFSGSQAEASLKNVRFD
+ KVFLGVDGFDLRVGITTHNEQEASLNRLMCDISEQVIAVADSTKFGKRSCHMIREFGD
+ IDVLVTDSNIPEEYVQRLRDMRIEVIIAEKEK"
+ misc_feature 1123661..1124398
+ /locus_tag="SARI_01157"
+ /note="Transcriptional regulators of sugar metabolism
+ [Transcription / Carbohydrate transport and metabolism];
+ Region: GlpR; COG1349"
+ /db_xref="CDD:224268"
+ misc_feature 1123661..1123807
+ /locus_tag="SARI_01157"
+ /note="helix_turn_helix, Deoxyribose operon repressor;
+ Region: HTH_DEOR; smart00420"
+ /db_xref="CDD:197714"
+ misc_feature 1123853..1124338
+ /locus_tag="SARI_01157"
+ /note="DeoR C terminal sensor domain; Region: DeoRC;
+ pfam00455"
+ /db_xref="CDD:201239"
+ gene 1125110..1125607
+ /locus_tag="SARI_01158"
+ CDS 1125110..1125607
+ /locus_tag="SARI_01158"
+ /inference="protein motif:BlastProDom:IPR004720"
+ /inference="protein motif:Gene3D:IPR004720"
+ /inference="protein motif:HMMPfam:IPR004720"
+ /inference="protein motif:HMMTigr:IPR004720"
+ /inference="protein motif:superfamily:IPR004720"
+ /inference="similar to AA sequence:INSD:AAS63683.1"
+ /note="'KEGG: ype:YPO0834 1.1e-77 manX; PTS system,
+ N-acetylgalactosamine-specific II component K02745;
+ COG: COG3444 Phosphotransferase system,
+ mannose/fructose/N-acetylgalactosamine-specific component
+ IIB;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570205.1"
+ /db_xref="GI:161503093"
+ /db_xref="InterPro:IPR004720"
+ /translation="MTQPNIVWTRIDERLLHGQIRITWGKHTEANLILVANDEAAEGP
+ NAAFMQAGMKASAGGEYAVRFFSIQKTIDVIHKASPQQKVFILCNSPTDVARLIEGGV
+ PIKHCNVGNMHFHEGKRQITKTVSVDEKDLDAFRRILACGATCTVQNTPDQTPVNVIE
+ LAVSA"
+ misc_feature 1125125..1125583
+ /locus_tag="SARI_01158"
+ /note="PTS_IIB, PTS system, Mannose/sorbose specific IIB
+ subunit. The bacterial phosphoenolpyruvate: sugar
+ phosphotransferase system (PTS) is a multi-protein system
+ involved in the regulation of a variety of metabolic and
+ transcriptional processes. This family...; Region:
+ PTS_IIB_man; cd00001"
+ /db_xref="CDD:237975"
+ misc_feature order(1125137..1125139,1125149..1125151,1125158..1125160)
+ /locus_tag="SARI_01158"
+ /note="active site"
+ /db_xref="CDD:237975"
+ misc_feature 1125158..1125160
+ /locus_tag="SARI_01158"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:237975"
+ gene 1125655..1126425
+ /locus_tag="SARI_01159"
+ CDS 1125655..1126425
+ /locus_tag="SARI_01159"
+ /inference="protein motif:HMMPfam:IPR004700"
+ /inference="similar to AA sequence:INSD:ABP39085.1"
+ /note="'KEGG: eci:UTI89_C3570 8.6e-39 agaC; PTS system,
+ N-acetylgalactosamine-specific IIC component 1 K02746;
+ COG: COG3715 Phosphotransferase system,
+ mannose/fructose/N-acetylgalactosamine-specific component
+ IIC;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570206.1"
+ /db_xref="GI:161503094"
+ /db_xref="InterPro:IPR004700"
+ /translation="MLFEATLVAIWAFLCGIDKYDVALNIHRPLITGPIVGLIMGDME
+ VGLIAGATLELAWLGLVPNAGAQPPDVTMGTIAAVAFAVMTGQSPEVAMGVGMPIAVL
+ MQMIVIGFFAMTAFTMGKADRCAEQADTAGISRLLVGTLITRSMLYFIIAFVTVYFGE
+ HAAAWIDENTPTVLLEGLGIGAKMVPAIGFAMLLKIMWSKEVAGVFFIGFVMTTYLKL
+ PIMAVAILGASIALLYYFFSGKNSNNNTKQAEDFEDGI"
+ misc_feature 1125655..1126422
+ /locus_tag="SARI_01159"
+ /note="Phosphotransferase system,
+ mannose/fructose/N-acetylgalactosamine-specific component
+ IIC [Carbohydrate transport and metabolism]; Region: ManY;
+ COG3715"
+ /db_xref="CDD:226238"
+ gene 1126415..1127305
+ /locus_tag="SARI_01160"
+ CDS 1126415..1127305
+ /locus_tag="SARI_01160"
+ /inference="protein motif:HMMPfam:IPR004704"
+ /inference="similar to AA sequence:INSD:ABP39084.1"
+ /note="'KEGG: eci:UTI89_C3571 3.4e-44 agaD; PTS system,
+ N-acetylgalactosamine-specific IID component K02747;
+ COG: COG3716 Phosphotransferase system,
+ mannose/fructose/N-acetylgalactosamine-specific component
+ IID;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570207.1"
+ /db_xref="GI:161503095"
+ /db_xref="InterPro:IPR004704"
+ /translation="MASDITVDKGRVAEAKTSSLIDNVDAYQDTEVRKVISRKDLWKC
+ AIRGLFMEGNFNFERMQGGGFAYSIIPALQKIHGNNRADLAKSLKNHLQFFNASPKLF
+ TFLLGTAVAMEENKEKPSTINVMKVAGMGPTGGIGDAIDHMTLMPLTLALGASIAIEG
+ SIAGPFVFFILYQIVHFLVYFGLMFMGYRAGTAAMVNMSDATEKLAKAANIMGIFVIG
+ ALCATFIRLKTTAAIDLGGKTVELQTALFDKIMPNLLPLALVFFMFKMVKGTGFWAKP
+ PVLIFSTLAAGVIGHLLGIV"
+ misc_feature 1126502..1127302
+ /locus_tag="SARI_01160"
+ /note="Phosphotransferase system,
+ mannose/fructose/N-acetylgalactosamine-specific component
+ IID [Carbohydrate transport and metabolism]; Region: ManZ;
+ COG3716"
+ /db_xref="CDD:226239"
+ gene 1127407..1127847
+ /locus_tag="SARI_01161"
+ CDS 1127407..1127847
+ /locus_tag="SARI_01161"
+ /inference="protein motif:Gene3D:IPR004701"
+ /inference="protein motif:HMMPfam:IPR004701"
+ /inference="protein motif:superfamily:IPR004701"
+ /inference="similar to AA sequence:REFSEQ:YP_001162056.1"
+ /note="'KEGG: ypk:y3222 1.7e-56 N-acetyl-galactosamine /
+ galactosamine PTS system enzyme IIA component K02744;
+ COG: COG2893 Phosphotransferase system,
+ mannose/fructose-specific component IIA;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570208.1"
+ /db_xref="GI:161503096"
+ /db_xref="InterPro:IPR004701"
+ /translation="MIGIVVSGHIHFASGMESAVRAIAGEQPQMAFVDFVENLSTDML
+ EEELRNAGDRVDSGDGVLFLTDIPGGSPCNRALNILMSGRNAELLAGVNLPMIANAAF
+ ERDGVSLAELVDILMDIGATSVQNIRTELAAAMVVDNSDNESGL"
+ misc_feature 1127410..1127766
+ /locus_tag="SARI_01161"
+ /note="PTS_IIA, PTS system, mannose/sorbose specific IIA
+ subunit. The bacterial phosphoenolpyruvate: sugar
+ phosphotransferase system (PTS) is a multi-protein system
+ involved in the regulation of a variety of metabolic and
+ transcriptional processes. This family...; Region:
+ PTS_IIA_man; cd00006"
+ /db_xref="CDD:237978"
+ misc_feature order(1127431..1127433,1127473..1127478,1127509..1127511,
+ 1127617..1127619,1127710..1127712)
+ /locus_tag="SARI_01161"
+ /note="active pocket/dimerization site; other site"
+ /db_xref="CDD:237978"
+ misc_feature order(1127431..1127433,1127602..1127604,1127617..1127619)
+ /locus_tag="SARI_01161"
+ /note="active site"
+ /db_xref="CDD:237978"
+ misc_feature 1127431..1127433
+ /locus_tag="SARI_01161"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:237978"
+ gene 1127831..1127980
+ /locus_tag="SARI_01162"
+ CDS 1127831..1127980
+ /locus_tag="SARI_01162"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570209.1"
+ /db_xref="GI:161503097"
+ /translation="MKVDSDVLLHPLTPKGVDADAATIDYITGYMRVVNDSLACDTRE
+ KIHHE"
+ gene 1127973..1129031
+ /locus_tag="SARI_01163"
+ CDS 1127973..1129031
+ /locus_tag="SARI_01163"
+ /inference="protein motif:HMMPfam:IPR010905"
+ /inference="protein motif:superfamily:IPR008928"
+ /inference="similar to AA sequence:REFSEQ:ZP_01495732.1"
+ /note="'COG: COG4225 Predicted unsaturated glucuronyl
+ hydrolase involved in regulation of bacterial surface
+ properties, and related proteins;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570210.1"
+ /db_xref="GI:161503098"
+ /db_xref="InterPro:IPR008928"
+ /db_xref="InterPro:IPR010905"
+ /translation="MSNMVQQTRAQQASETMKRVYRYQATHQTRSVIRRSGKVRFIKD
+ TDWERGVFWSCVAAAWLATGDQEYLDGVMNYTLHTGFRPGPNLRFADDLICCQAYLDV
+ WPVIAIPEALEPTIKAISAIVNEPKPGREDWWWCDALFMAPATFAALSKCTNDPRYLA
+ YMDQAFWDAVEHLRDPETGLFYRDHRYIPDGNGSELREENGEKVFWSRGIGWVLAAIP
+ RLLARMPEDYAGRQRYLNLFTDLADKVIRYQHEDGLWRTSLLDPHRFPAPESSATALF
+ CYGLCWGMNQGVLPAEIYLPVVEKAWDALQGCIHKNGMIGWVQLPAFNPRDVKFEHNI
+ DYGAGAYLLAATEVMRLK"
+ misc_feature 1128003..1129025
+ /locus_tag="SARI_01163"
+ /note="Predicted unsaturated glucuronyl hydrolase involved
+ in regulation of bacterial surface properties, and related
+ proteins [General function prediction only]; Region:
+ COG4225"
+ /db_xref="CDD:226678"
+ gene complement(1129162..1129341)
+ /locus_tag="SARI_01164"
+ CDS complement(1129162..1129341)
+ /locus_tag="SARI_01164"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570211.1"
+ /db_xref="GI:161503099"
+ /translation="MKRYWLIYLNKTTTVTRKITKMKLNEGKIKANERKNQKHASPKN
+ DKLTKRNRTQVNGPI"
+ gene 1129362..1130594
+ /locus_tag="SARI_01165"
+ CDS 1129362..1130594
+ /locus_tag="SARI_01165"
+ /inference="protein motif:HMMPfam:IPR007197"
+ /inference="similar to AA sequence:INSD:AAS63690.1"
+ /note="'KEGG: syg:sync_2368 1.1e-13 arylsulfatase
+ regulator;
+ COG: COG0641 Arylsulfatase regulator (Fe-S
+ oxidoreductase);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570212.1"
+ /db_xref="GI:161503100"
+ /db_xref="InterPro:IPR007197"
+ /translation="MNMSQTQRAYFHMMAKPVSYRCNLHCEYCFYLEKETMLNARKSP
+ KQTMSDSMLRRYIRDYLRSHAGDTVDFAWQGGEPTLAGLDFYRKAVAYQQQYADGKTI
+ TNSFQTNAIAINRQWADFFAENRFLIGVSVDGIAEIHDKYRIAVNGQPTFERVNKSIA
+ LLREYNVDFNTLTVVNDQNYDKGRETYQALKALGSTFLQFIPIVEVDARCLPHTKGHY
+ SPPADAVLSPFSVPADGYGRFMNAVFDAWVKEDVGSIYIREFDSLLGTWMGYPASTCV
+ QAITCGQALIIETNGDIYSCDHYVYPAYLLGNIANTSLVKMATSRQQQRFGNAKQEKL
+ TQMCQQCEVKALCQGGCPKHRIVPQTGEKHKHNYLCASYKHFFYHTAPVMQAMSKIIQ
+ SGGVAADIMPLLNKFNSH"
+ misc_feature 1129395..1130531
+ /locus_tag="SARI_01165"
+ /note="anaerobic sulfatase-maturating enzyme; Region:
+ sulfatase_rSAM; TIGR03942"
+ /db_xref="CDD:188457"
+ misc_feature 1129410..>1129874
+ /locus_tag="SARI_01165"
+ /note="Radical SAM superfamily. Enzymes of this family
+ generate radicals by combining a 4Fe-4S cluster and
+ S-adenosylmethionine (SAM) in close proximity. They are
+ characterized by a conserved CxxxCxxC motif, which
+ coordinates the conserved iron-sulfur cluster; Region:
+ Radical_SAM; cd01335"
+ /db_xref="CDD:100105"
+ misc_feature order(1129425..1129427,1129431..1129433,1129437..1129439,
+ 1129443..1129451,1129581..1129583,1129587..1129592,
+ 1129680..1129688,1129752..1129754)
+ /locus_tag="SARI_01165"
+ /note="FeS/SAM binding site; other site"
+ /db_xref="CDD:100105"
+ misc_feature 1130202..1130471
+ /locus_tag="SARI_01165"
+ /note="radical SAM additional 4Fe4S-binding SPASM domain;
+ Region: rSAM_more_4Fe4S; TIGR04085"
+ /db_xref="CDD:234461"
+ gene 1130602..1132233
+ /locus_tag="SARI_01166"
+ CDS 1130602..1132233
+ /locus_tag="SARI_01166"
+ /inference="protein motif:HMMPfam:IPR000917"
+ /inference="protein motif:ScanRegExp:IPR000917"
+ /inference="similar to AA sequence:REFSEQ:ZP_01495730.1"
+ /note="'KEGG: ypn:YPN_3044 6.1e-251 sulfatase;
+ COG: COG3119 Arylsulfatase A and related enzymes;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570213.1"
+ /db_xref="GI:161503101"
+ /db_xref="InterPro:IPR000917"
+ /translation="MTMKLSAGRKTLLAGLIATVCSTIASSVLAAPTSTVAGNEKPNV
+ LLVIMDDLGTGQLDFTLNNLDKNVLSQRSVPMRYQGDLDKMIDAAQRAMPNVAQLAQN
+ GVKMTNAFVAHPVCGPSRAGIYTGRYPTSFGTYSNDDAIKGIPLDIKLLPELFQENGY
+ ATANIGKWHNSRIDKKNYIADDVKTRDYHDNMISVSEPGYEPQKRGFDYSYSYYASGA
+ ALWNSPAIWRNSQNISAPGYLTHHLTEETLKFIDRAGQKPFFISLAYSVPHIPLEQAS
+ PAKYMDRFNTGNVEADKYFAAINAADEGIGKIINYLKEKDELDNTLIFFISDNGAVNE
+ SPMPMNGMDRGYKGQMYNGGVHIPFVAYWPKQIPAGTQSDTLISALDILPTALHAAGI
+ TIPDEMNVDGKDIMPVLAGKSKTSPHQYLYWAGPGAKHYSEENQPFWYGYWKWITYTN
+ PSAPKNPNLEKLSKASWAIRDQEWALYFYDDGTNTPKLFNDKQDPMESKDLAAQFPER
+ VKVMKTAFYEWIKNKPKPIAWGQDRFHILEESAKK"
+ misc_feature 1130719..1132152
+ /locus_tag="SARI_01166"
+ /note="Arylsulfatase A and related enzymes [Inorganic ion
+ transport and metabolism]; Region: AslA; COG3119"
+ /db_xref="CDD:225661"
+ misc_feature 1130725..1131891
+ /locus_tag="SARI_01166"
+ /note="Sulfatase; Region: Sulfatase; pfam00884"
+ /db_xref="CDD:216172"
+ gene 1132413..1133903
+ /locus_tag="SARI_01167"
+ CDS 1132413..1133903
+ /locus_tag="SARI_01167"
+ /inference="similar to AA sequence:REFSEQ:ZP_01495729.1"
+ /note="'COG: COG4289 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570214.1"
+ /db_xref="GI:161503102"
+ /translation="MLTMSVEISAKPRPIIPYEHPDAAMYCLLFKQHIIRQWCKKCPY
+ DIHDTRLQKLFQDSQISLQYQCDYLVRYVAEAFDHYAVWGHTHAYYPGRPSQQNARTD
+ ALEGVSRVLPTLAVWLRNQPAGEGRMDDLKGGTLNITAIITEAFLAGTDPTHPGYWGK
+ LHDYDQRICESADLALALWLCRETVWERLSSAQQQQITCWFNQVNGLQTVDNNWHLFP
+ LTVQFVMRALNGSGDVSNEKYERIKEFHVGGGWFRDGAHGNYDYYNAWGFHYSLYWLD
+ QINPEYDPQFIRSCMAEFVTTYRYLMTPQGIPFFGRSACYRLAVSAPLLAVASHSKDA
+ LQIGEAKRALETTLRYFIGNGAMRFGVPTQGLFADDERLVDNYSGPASSFWSLRALNI
+ ALYCASDINLWLCESRQLPVELQDFSLTIEPVNLFVMGTCETKEVVATFRSDYTQQQS
+ PLTRGLTTPSWSARFKEWLTGRAERPKNNLLRKGVTSYSSKMTAFF"
+ misc_feature 1132455..1133900
+ /locus_tag="SARI_01167"
+ /note="Uncharacterized protein conserved in bacteria
+ (DUF2264); Region: DUF2264; cl01752"
+ /db_xref="CDD:242688"
+ gene complement(1134163..1135254)
+ /locus_tag="SARI_01168"
+ CDS complement(1134163..1135254)
+ /locus_tag="SARI_01168"
+ /inference="protein motif:HMMPfam:IPR002917"
+ /inference="protein motif:HMMPfam:IPR013029"
+ /inference="protein motif:HMMTigr:IPR004396"
+ /inference="protein motif:ScanRegExp:IPR000583"
+ /inference="protein motif:superfamily:IPR012676"
+ /inference="similar to AA sequence:INSD:AAX65684.1"
+ /note="translation-associated GTPase; the crystal
+ structure of the Haemophilus influenzae YchF protein
+ showed similarity to the yeast structure (PDB: 1NI3);
+ fluorescence spectroscopy revealed nucleic acid binding;
+ the yeast protein YBR025c interacts with the translation
+ elongation factor eEF1"
+ /codon_start=1
+ /transl_table=11
+ /product="GTP-dependent nucleic acid-binding protein EngD"
+ /protein_id="YP_001570215.1"
+ /db_xref="GI:161503103"
+ /db_xref="InterPro:IPR000583"
+ /db_xref="InterPro:IPR002917"
+ /db_xref="InterPro:IPR004396"
+ /db_xref="InterPro:IPR012676"
+ /db_xref="InterPro:IPR013029"
+ /translation="MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVV
+ PMPDPRLDQLAEIVKPQRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGH
+ VVRCFENDNIIHVAGKVNPAEDIDVINTELALADLDTCERAIHRVQKKAKGGDKDAKA
+ ELAALEKCLPHLAEAGMLRSLDLTDEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPY
+ LDQVREIAAKEGSVVVPVCAAVEADIAELDDEERDEFMAELGLEEPGLNRVIRAGYRL
+ LNLQTYFTAGVKEVRAWTIPVGATAPQAAGKIHTDFEKGFIRAQTIAFDDFITYKGEQ
+ GAKEAGKMRAEGKDYIVKDGDVMNFLFNV"
+ misc_feature complement(1134166..1135254)
+ /locus_tag="SARI_01168"
+ /note="GTP-binding protein YchF; Reviewed; Region:
+ PRK09601"
+ /db_xref="CDD:236583"
+ misc_feature complement(1134424..1135242)
+ /locus_tag="SARI_01168"
+ /note="YchF GTPase; Region: YchF; cd01900"
+ /db_xref="CDD:206687"
+ misc_feature complement(1135207..1135230)
+ /locus_tag="SARI_01168"
+ /note="G1 box; other site"
+ /db_xref="CDD:206687"
+ misc_feature complement(order(1134538..1134546,1134625..1134627,
+ 1134631..1134636,1135204..1135215,1135219..1135221))
+ /locus_tag="SARI_01168"
+ /note="GTP/Mg2+ binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:206687"
+ misc_feature complement(1135138..1135161)
+ /locus_tag="SARI_01168"
+ /note="Switch I region; other site"
+ /db_xref="CDD:206687"
+ misc_feature complement(1135147..1135149)
+ /locus_tag="SARI_01168"
+ /note="G2 box; other site"
+ /db_xref="CDD:206687"
+ misc_feature complement(order(1134967..1134996,1135015..1135044))
+ /locus_tag="SARI_01168"
+ /note="Switch II region; other site"
+ /db_xref="CDD:206687"
+ misc_feature complement(1135030..1135041)
+ /locus_tag="SARI_01168"
+ /note="G3 box; other site"
+ /db_xref="CDD:206687"
+ misc_feature complement(1134625..1134636)
+ /locus_tag="SARI_01168"
+ /note="G4 box; other site"
+ /db_xref="CDD:206687"
+ misc_feature complement(1134538..1134546)
+ /locus_tag="SARI_01168"
+ /note="G5 box; other site"
+ /db_xref="CDD:206687"
+ misc_feature complement(1134172..1134420)
+ /locus_tag="SARI_01168"
+ /note="TGS_YchF_C: This subfamily represents TGS
+ domain-containing YchF GTP-binding protein, a universally
+ conserved GTPase whose function is unknown. The N-terminal
+ domain of the YchF protein belongs to the Obg-like family
+ of GTPases, and some members of the...; Region:
+ TGS_YchF_C; cd04867"
+ /db_xref="CDD:133440"
+ gene complement(1135371..1135979)
+ /locus_tag="SARI_01169"
+ CDS complement(1135371..1135979)
+ /locus_tag="SARI_01169"
+ /inference="protein motif:BlastProDom:IPR001328"
+ /inference="protein motif:Gene3D:IPR001328"
+ /inference="protein motif:HMMPanther:IPR001328"
+ /inference="protein motif:HMMPfam:IPR001328"
+ /inference="protein motif:HMMTigr:IPR001328"
+ /inference="protein motif:ScanRegExp:IPR001328"
+ /inference="protein motif:superfamily:IPR001328"
+ /inference="similar to AA sequence:REFSEQ:YP_150371.1"
+ /note="Enables the recycling of peptidyl-tRNAs produced at
+ termination of translation"
+ /codon_start=1
+ /transl_table=11
+ /product="peptidyl-tRNA hydrolase"
+ /protein_id="YP_001570216.1"
+ /db_xref="GI:161503104"
+ /db_xref="InterPro:IPR001328"
+ /translation="MDLLRTKNVAIKLIVGLANPGAEYAATRHNAGAWYVDLLAERLR
+ APLREEPKFFGYTSRITLEGEDVRLLVPTTFMNLSGKAVGAMASFYRIQPDEILVAHD
+ ELDLPPGVAKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRVGIGHPGDKNKVVGFVLG
+ KPPVSEQKLIDEAIDEAARCTELWFKDGLAKATSRLHTFKAQ"
+ misc_feature complement(1135428..1135943)
+ /locus_tag="SARI_01169"
+ /note="Peptidyl-tRNA hydrolase (PTH) is a monomeric
+ protein that cleaves the ester bond linking the nascent
+ peptide and tRNA when peptidyl-tRNA is released
+ prematurely from the ribosome. This ensures the recycling
+ of peptidyl-tRNAs into tRNAs produced through...; Region:
+ PTH; cd00462"
+ /db_xref="CDD:238259"
+ misc_feature complement(order(1135614..1135616,1135674..1135676,
+ 1135752..1135757,1135893..1135895,1135923..1135925))
+ /locus_tag="SARI_01169"
+ /note="putative active site [active]"
+ /db_xref="CDD:238259"
+ misc_feature complement(1135893..1135895)
+ /locus_tag="SARI_01169"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:238259"
+ gene 1136232..1136510
+ /locus_tag="SARI_01170"
+ CDS 1136232..1136510
+ /locus_tag="SARI_01170"
+ /inference="similar to AA sequence:REFSEQ:YP_150372.1"
+ /note="'YchH; transcription activated by CRP (cyclic AMP
+ receptor protein), a global transcription factor involved
+ in regulation of metabolism in enteric bacteria; ychH
+ presents a class II promoter to bind CRP; unknown
+ function'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570217.1"
+ /db_xref="GI:161503105"
+ /translation="MKRKNASLFGNTLMGLGLVVMVVGVGYSILNQLPQFNLPQFFAH
+ GAILSIFVGAVLWLAGARVGGHEQVSDKYWWLRHYDKRCRRSDNRRHS"
+ misc_feature 1136232..1136507
+ /locus_tag="SARI_01170"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10692"
+ /db_xref="CDD:182651"
+ gene complement(1136555..1138213)
+ /locus_tag="SARI_01171"
+ CDS complement(1136555..1138213)
+ /locus_tag="SARI_01171"
+ /inference="protein motif:Gene3D:IPR002645"
+ /inference="protein motif:HMMPfam:IPR002645"
+ /inference="protein motif:HMMPfam:IPR011547"
+ /inference="protein motif:HMMTigr:IPR001902"
+ /inference="protein motif:ScanRegExp:IPR001902"
+ /inference="protein motif:superfamily:IPR002645"
+ /inference="similar to AA sequence:INSD:AAL20696.1"
+ /note="putative role in sulfate transport across the inner
+ membrane; member of the SulP family of sulfate
+ transporters; seems to mediate transport via
+ sulfate/proton symport"
+ /codon_start=1
+ /transl_table=11
+ /product="putative sulfate transporter YchM"
+ /protein_id="YP_001570218.1"
+ /db_xref="GI:161503106"
+ /db_xref="InterPro:IPR001902"
+ /db_xref="InterPro:IPR002645"
+ /db_xref="InterPro:IPR011547"
+ /translation="MPFRALIDACWKEKYTASRFTRDVIAGITVGIIAIPLAMALAIG
+ SGVAPQYGLYTSAVAGIVIALTGGSRFSVSGPTAAFVVILYPVSQQFGLAGLLVATLM
+ SGFFLILFGLARLGRLIEYIPVSVTLGFTSGIGITIGTMQIKDFLGLQMAHVPEHYLQ
+ KVGALFMALPTVNIGDAAIGVVTLGTLISWPRLGIRLPGHLPALLAGCAVMGIVNLLG
+ GDVATIGSQFHYILADGTQGNGIPQLLPQLVLPWNLPGSDFTLSWDSLRALLPAAFSM
+ AMLGAIESLLCAVVLDGMTGTKHKANSELIGQGLGNMVAPFFGGITATAAIARSAANV
+ RAGATSPVSAVIHAILVILALLVLAPLLSWLPLSAMAALLLMVAWNMSEAHKVVDLLR
+ HAPKDDIIVMLLCMSLTVLFDMVIAISVGIVLASLLFMRRIARMTRLAPVNVDVPDDV
+ LVLRVIGPLFFAAAEGLFTDLESRIKGKRIVVLKWDAVPVLDAGGLDAFQRFVKRLPE
+ GCELRISNLEFQPLRTMARAGIKPIPGRLTFFPNRTAALADLIS"
+ misc_feature complement(1136564..1138213)
+ /locus_tag="SARI_01171"
+ /note="putative transporter; Provisional; Region:
+ PRK11660"
+ /db_xref="CDD:183265"
+ misc_feature complement(1137953..1138183)
+ /locus_tag="SARI_01171"
+ /note="Sulfate transporter N-terminal domain with GLY
+ motif; Region: Sulfate_tra_GLY; pfam13792"
+ /db_xref="CDD:205965"
+ misc_feature complement(1137173..1137886)
+ /locus_tag="SARI_01171"
+ /note="Sulfate transporter family; Region: Sulfate_transp;
+ pfam00916"
+ /db_xref="CDD:216188"
+ misc_feature complement(1136588..1136845)
+ /locus_tag="SARI_01171"
+ /note="Sulphate Transporter and Anti-Sigma factor
+ antagonist domain of SulP-like sulfate transporters, plays
+ a role in the function and regulation of the transport
+ activity, proposed general NTP binding function; Region:
+ STAS_SulP_like_sulfate_transporter; cd07042"
+ /db_xref="CDD:132913"
+ gene complement(1138365..1139330)
+ /locus_tag="SARI_01172"
+ CDS complement(1138365..1139330)
+ /locus_tag="SARI_01172"
+ /inference="protein motif:HMMPfam:IPR000836"
+ /inference="protein motif:HMMTigr:IPR005946"
+ /inference="protein motif:ScanRegExp:IPR000842"
+ /inference="protein motif:ScanRegExp:IPR002375"
+ /inference="similar to AA sequence:REFSEQ:YP_216761.1"
+ /note="catalyzes the formation of 5-phospho-alpha-D-ribose
+ 1-phosphate from D-ribose 5-phosphate and ATP"
+ /codon_start=1
+ /transl_table=11
+ /product="ribose-phosphate pyrophosphokinase"
+ /protein_id="YP_001570219.1"
+ /db_xref="GI:161503107"
+ /db_xref="InterPro:IPR000836"
+ /db_xref="InterPro:IPR000842"
+ /db_xref="InterPro:IPR002375"
+ /db_xref="InterPro:IPR005946"
+ /translation="MPEVLLVPDMKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDG
+ EVSVQINENVRGGDIFIIQSTCAPTNDNLMELVVMVDALRRASAGRITAVIPYFGYAR
+ QDRRVRSARVPITAKVVADFLSSVGVDRVLTVDLHAEQIQGFFDVPVDNVFGSPILLE
+ DMLQLNLDNPIVVSPDIGGVVRARAIAKLLNDTDMAIIDKRRPRANVSQVMHIIGDVA
+ GRDCVLVDDMIDTGGTLCKAAEALKERGAKRVFAYATHPIFSGNAANNLRNSVIDEVV
+ VCDTIPLTDEIKALPNVRTLTLSGMLAEAIRRISNEESISAMFEH"
+ misc_feature complement(1138371..1139303)
+ /locus_tag="SARI_01172"
+ /note="ribose-phosphate pyrophosphokinase; Provisional;
+ Region: PRK01259"
+ /db_xref="CDD:234929"
+ misc_feature complement(1138950..1139303)
+ /locus_tag="SARI_01172"
+ /note="N-terminal domain of ribose phosphate
+ pyrophosphokinase; Region: Pribosyltran_N; pfam13793"
+ /db_xref="CDD:222383"
+ misc_feature complement(1138491..1138868)
+ /locus_tag="SARI_01172"
+ /note="Phosphoribosyl transferase (PRT)-type I domain;
+ Region: PRTases_typeI; cd06223"
+ /db_xref="CDD:206754"
+ misc_feature complement(order(1138557..1138559,1138629..1138643,
+ 1138647..1138655,1138797..1138799,1138803..1138805))
+ /locus_tag="SARI_01172"
+ /note="active site"
+ /db_xref="CDD:206754"
+ gene 1139411..1139581
+ /locus_tag="SARI_01173"
+ CDS 1139411..1139581
+ /locus_tag="SARI_01173"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570220.1"
+ /db_xref="GI:161503108"
+ /translation="MQRLEQGDVVTEAQLTRLTRQHSRFMRAGSDASYQSHTVYTTGG
+ SSSRHLPETRMF"
+ gene complement(1139578..1140429)
+ /gene="ipk"
+ /locus_tag="SARI_01174"
+ CDS complement(1139578..1140429)
+ /gene="ipk"
+ /locus_tag="SARI_01174"
+ /inference="protein motif:HMMPfam:IPR006204"
+ /inference="protein motif:HMMPfam:IPR013750"
+ /inference="protein motif:HMMPIR:IPR004424"
+ /inference="protein motif:HMMTigr:IPR004424"
+ /inference="similar to AA sequence:INSD:AAA27195.1"
+ /note="An essential enzyme in the nonmevalonate pathway of
+ isopentenyl diphosphate and dimethylallyl diphosphate
+ biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="4-diphosphocytidyl-2-C-methyl-D-erythritol
+ kinase"
+ /protein_id="YP_001570221.1"
+ /db_xref="GI:161503109"
+ /db_xref="InterPro:IPR004424"
+ /db_xref="InterPro:IPR006204"
+ /db_xref="InterPro:IPR013750"
+ /translation="MMTYWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTLHIE
+ PRRDGEIHLLTPVNGVENEDNLIVRAARGLMKAALESGRLPAGSGADISIEKRLPMGG
+ GLGGGSSNAATVLVALNHLWQCGLSVDELAKLGLTLGADVPVFVRGHAAFAEGVGEIL
+ TPVNPPEKWYLVAHPGVIIPTPVIFKDPQLPRNTPKRSIDTLLKCEFSNDCEVIARKR
+ FREVDAALSWLLEYAPSRLTGTGACVFAEFDTEPCARQVLEQAPEWLNAFVAKGVNLS
+ PLHRSLL"
+ misc_feature complement(1139611..1140429)
+ /gene="ipk"
+ /locus_tag="SARI_01174"
+ /note="4-diphosphocytidyl-2-C-methyl-D-erythritol kinase;
+ Provisional; Region: ipk; PRK00343"
+ /db_xref="CDD:234731"
+ misc_feature complement(1139986..1140159)
+ /gene="ipk"
+ /locus_tag="SARI_01174"
+ /note="GHMP kinases N terminal domain; Region:
+ GHMP_kinases_N; pfam00288"
+ /db_xref="CDD:215839"
+ gene complement(1140426..1141049)
+ /gene="lolB"
+ /locus_tag="SARI_01175"
+ CDS complement(1140426..1141049)
+ /gene="lolB"
+ /locus_tag="SARI_01175"
+ /inference="protein motif:HMMPfam:IPR004565"
+ /inference="protein motif:HMMTigr:IPR004565"
+ /inference="similar to AA sequence:INSD:AAX65678.1"
+ /note="Incorporates lipoproteins in the outer membrane
+ after they are released by the LolA protein"
+ /codon_start=1
+ /transl_table=11
+ /product="outer membrane lipoprotein LolB"
+ /protein_id="YP_001570222.1"
+ /db_xref="GI:161503110"
+ /db_xref="InterPro:IPR004565"
+ /translation="MTLPDFRLIRLLPLASLVLTACTLPVHKEPGKSPDSPQWRQHQQ
+ EVRNLNQYQTRGAFAYISDDQKVYARFFWQQTGQDRYRLLLTNPLGSTELELNAQPGN
+ VQLVDNKGQRYTADDAEEMIGKLTGMPIPLNSLRQWILGLPGDATDYKLDDQYRLSEV
+ NYRQDGKNWKVVYGGYDSKTQPAMPANMELSDGSQRIKLKMDNWIVK"
+ misc_feature complement(1140432..1141037)
+ /gene="lolB"
+ /locus_tag="SARI_01175"
+ /note="outer membrane lipoprotein LolB; Region: lolB;
+ TIGR00548"
+ /db_xref="CDD:129639"
+ misc_feature complement(1140441..1140908)
+ /gene="lolB"
+ /locus_tag="SARI_01175"
+ /note="Outer membrane lipoprotein LolB; Region: LolB;
+ pfam03550"
+ /db_xref="CDD:112372"
+ gene 1141372..1142628
+ /gene="hemA"
+ /locus_tag="SARI_01176"
+ CDS 1141372..1142628
+ /gene="hemA"
+ /locus_tag="SARI_01176"
+ /inference="protein motif:HMMPanther:IPR003462"
+ /inference="protein motif:HMMPfam:IPR000343"
+ /inference="protein motif:HMMPfam:IPR006151"
+ /inference="protein motif:HMMTigr:IPR000343"
+ /inference="protein motif:ScanRegExp:IPR000343"
+ /inference="protein motif:superfamily:IPR000343"
+ /inference="similar to AA sequence:SwissProt:P0A1Q7"
+ /note="catalyzes the formation of glutamate-1-semialdehyde
+ from glutamyl-tRNA(Glu) and NADPH; the second step of the
+ pathway is catalyzed by glutamate-1-semialdehyde
+ aminomutase which results in the formation of
+ 5-aminolevulinic acid; functions in porphyrin
+ (tetrapyrroles) biosynthesis; the crystal structure showed
+ a C-terminal dimerization domain that appears to be absent
+ in Chlamydial proteins"
+ /codon_start=1
+ /transl_table=11
+ /product="glutamyl-tRNA reductase"
+ /protein_id="YP_001570223.1"
+ /db_xref="GI:161503111"
+ /db_xref="InterPro:IPR000343"
+ /db_xref="InterPro:IPR003462"
+ /db_xref="InterPro:IPR006151"
+ /translation="MTLLALGINHKTAPVSLRERVTFSPDTLDQALDSLLAQPMVQGG
+ VVLSTCNRTELYLSVEEQDNLQEALIRWLCDYHNLNEDDLRNSLYWHQDNDAVSHLMR
+ VASGLDSLVLGEPQILGQVKKAFADSQKGHLNASALERMFQKSFSVAKRVRTETDIGA
+ SAVSVAFAACTLARQIFESLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRER
+ AQALADEVGAEVISLSDIDARLQDADIIISSTASPLPIIGKGMVERALKSRRNQPMLL
+ VDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRQAAAVEAETIVEQEASEFMA
+ WLRAQGASETIREYRSQSEQIRDELTTKALSALQQGGDAQAILQDLAWKLTNRLIHAP
+ TKSLQQAARDGDDERLNILRDSLGLE"
+ misc_feature 1141372..1142625
+ /gene="hemA"
+ /locus_tag="SARI_01176"
+ /note="glutamyl-tRNA reductase; Reviewed; Region: hemA;
+ PRK00045"
+ /db_xref="CDD:234592"
+ misc_feature 1141378..1142325
+ /gene="hemA"
+ /locus_tag="SARI_01176"
+ /note="NADP-binding domain of glutamyl-tRNA reductase;
+ Region: NAD_bind_Glutamyl_tRNA_reduct; cd05213"
+ /db_xref="CDD:133452"
+ misc_feature order(1141426..1141428,1141516..1141518,1141717..1141719,
+ 1141726..1141728,1141738..1141740,1141747..1141749,
+ 1141759..1141761)
+ /gene="hemA"
+ /locus_tag="SARI_01176"
+ /note="tRNA; other site"
+ /db_xref="CDD:133452"
+ misc_feature order(1141516..1141521,1141525..1141527,1141696..1141698,
+ 1141711..1141713,1141717..1141719,1141729..1141731)
+ /gene="hemA"
+ /locus_tag="SARI_01176"
+ /note="putative tRNA binding site [nucleotide binding];
+ other site"
+ /db_xref="CDD:133452"
+ misc_feature order(1141936..1141938,1141942..1141944,1141951..1141953)
+ /gene="hemA"
+ /locus_tag="SARI_01176"
+ /note="putative NADP binding site [chemical binding];
+ other site"
+ /db_xref="CDD:133452"
+ misc_feature 1142329..1142625
+ /gene="hemA"
+ /locus_tag="SARI_01176"
+ /note="Glutamyl-tRNAGlu reductase, dimerisation domain;
+ Region: GlutR_dimer; pfam00745"
+ /db_xref="CDD:201424"
+ gene 1142669..1143751
+ /gene="prfA"
+ /locus_tag="SARI_01177"
+ CDS 1142669..1143751
+ /gene="prfA"
+ /locus_tag="SARI_01177"
+ /inference="protein motif:HMMPfam:IPR000352"
+ /inference="protein motif:HMMPfam:IPR005139"
+ /inference="protein motif:HMMPIR:IPR012086"
+ /inference="protein motif:HMMTigr:IPR004373"
+ /inference="protein motif:ScanRegExp:IPR000352"
+ /inference="similar to AA sequence:INSD:AAX65676.1"
+ /note="recognizes the termination signals UAG and UAA
+ during protein translation a specificity which is
+ dependent on amino acid residues residing in loops of the
+ L-shaped tRNA-like molecule of RF1; this protein is
+ similar to release factor 2"
+ /codon_start=1
+ /transl_table=11
+ /product="peptide chain release factor 1"
+ /protein_id="YP_001570224.1"
+ /db_xref="GI:161503112"
+ /db_xref="InterPro:IPR000352"
+ /db_xref="InterPro:IPR004373"
+ /db_xref="InterPro:IPR005139"
+ /db_xref="InterPro:IPR012086"
+ /translation="MKPSIVAKLEALHERHEEVQALLGDAGIIADQDRFRALSREYAQ
+ LSDVSRCFTDWQQVQDDIETAQMMLDDPEMREMAQEELREAKEKSEQLEQQLQVLLLP
+ KDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYK
+ EIIAKISGEGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDIN
+ PADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGA
+ RIHAAETAKRQQAEASTRRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDETME
+ GKLDMLIEPIVQEHQADLLAALSEQE"
+ misc_feature 1142672..1143742
+ /gene="prfA"
+ /locus_tag="SARI_01177"
+ /note="peptide chain release factor 1; Validated; Region:
+ prfA; PRK00591"
+ /db_xref="CDD:234801"
+ misc_feature 1142870..1143202
+ /gene="prfA"
+ /locus_tag="SARI_01177"
+ /note="This domain is found in peptide chain release
+ factors; Region: PCRF; smart00937"
+ /db_xref="CDD:214923"
+ misc_feature 1143290..1143631
+ /gene="prfA"
+ /locus_tag="SARI_01177"
+ /note="RF-1 domain; Region: RF-1; pfam00472"
+ /db_xref="CDD:201249"
+ gene 1143751..1144584
+ /locus_tag="SARI_01178"
+ CDS 1143751..1144584
+ /locus_tag="SARI_01178"
+ /inference="protein motif:HMMPfam:IPR013217"
+ /inference="protein motif:HMMTigr:IPR004556"
+ /inference="protein motif:ScanRegExp:IPR002052"
+ /inference="similar to AA sequence:INSD:AAX65675.1"
+ /note="HemK; PrmC; transfers a methyl group from
+ S-adenosylmethionine to amide nitrogen of specific
+ glutamine residues in protein chain release factors PrfA
+ and PrfB"
+ /codon_start=1
+ /transl_table=11
+ /product="N5-glutamine S-adenosyl-L-methionine-dependent
+ methyltransferase"
+ /protein_id="YP_001570225.1"
+ /db_xref="GI:161503113"
+ /db_xref="InterPro:IPR002052"
+ /db_xref="InterPro:IPR004556"
+ /db_xref="InterPro:IPR013217"
+ /translation="MDFQHWLCEAVNQLRDSDSPRRDAEILLEHVTGKGRTYIMAFGE
+ TPLAATQQQQLAELLRRRKQGEPIAHLTGIREFWSLPLFVSPATLIPRPDTECLVEQA
+ LARLPVKTCRILDLGTGTGAIALALASERPDCDVTAVDRMPDAVALAIRNAEHLAIRN
+ VRILQSCWFSALPGQQFDMIVSNPPYIDARDPHLSEGDVRFEPLSALVADENGMADIT
+ HIIDHARQVLTPGGWLLLEHGWQQGEAVRATFRRADYTDVETCRDYGGNERVTCGRIT
+ P"
+ misc_feature 1143751..1144572
+ /locus_tag="SARI_01178"
+ /note="N5-glutamine S-adenosyl-L-methionine-dependent
+ methyltransferase; Provisional; Region: PRK09328"
+ /db_xref="CDD:236467"
+ misc_feature 1144138..1144461
+ /locus_tag="SARI_01178"
+ /note="S-adenosylmethionine-dependent methyltransferases
+ (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
+ that use S-adenosyl-L-methionine (SAM or AdoMet) as a
+ substrate for methyltransfer, creating the product
+ S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
+ cd02440"
+ /db_xref="CDD:100107"
+ gene 1144581..1144970
+ /locus_tag="SARI_01179"
+ CDS 1144581..1144970
+ /locus_tag="SARI_01179"
+ /inference="protein motif:HMMPfam:IPR007360"
+ /inference="similar to AA sequence:REFSEQ:YP_150380.1"
+ /note="'COG: COG3094 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative transcriptional regulator"
+ /protein_id="YP_001570226.1"
+ /db_xref="GI:161503114"
+ /db_xref="InterPro:IPR007360"
+ /translation="MTIAMLLTFHLICVALSVSLFVARYWWRYYGHALAAARWTRIVP
+ PVIDTLLLLSGIGLIVKTHILPFTESGAWLTEKLFGVIIYIVLGFIALDYRQARSQQA
+ RFIAFPLALVVLYIIIKLATTKIPLLG"
+ misc_feature 1144581..1144967
+ /locus_tag="SARI_01179"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10278"
+ /db_xref="CDD:182351"
+ gene 1144974..1145783
+ /locus_tag="SARI_01180"
+ CDS 1144974..1145783
+ /locus_tag="SARI_01180"
+ /inference="similar to AA sequence:INSD:AAV77069.1"
+ /note="'COG: COG2912 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative transcriptional regulator"
+ /protein_id="YP_001570227.1"
+ /db_xref="GI:161503115"
+ /translation="MRSLADFEFNNAPLCDGMILASEMIRADFPTQFVYDELERLVSL
+ AQEEISQLLSQDEQLEKLLALFYGEWGFTDSRGVYRLSDALWLDNVLKNRQGSAVSLG
+ AILLWIANRLDLPLVPVIFPTQLILRIESLEGEMWLINPFNGETLDEHTLEVWLKGNI
+ SPVAELFNEDLDEADNAEVIRKLLDTLKSSLMEERQMELALRVSEALLQFNPEDPYEI
+ RDRGLIYAQLECEHVALTDLSYFVEQCPEDPISEMIRAQINTIAHKQIVLH"
+ misc_feature 1144974..1145780
+ /locus_tag="SARI_01180"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10941"
+ /db_xref="CDD:182854"
+ misc_feature 1145073..1145528
+ /locus_tag="SARI_01180"
+ /note="Transglutaminase-like superfamily; Region:
+ Transglut_core2; pfam13369"
+ /db_xref="CDD:222080"
+ gene 1145821..1146675
+ /locus_tag="SARI_01181"
+ CDS 1145821..1146675
+ /locus_tag="SARI_01181"
+ /inference="protein motif:Gene3D:IPR006218"
+ /inference="protein motif:HMMPfam:IPR006218"
+ /inference="protein motif:HMMTigr:IPR006269"
+ /inference="similar to AA sequence:INSD:AAL20687.1"
+ /note="catalyzes the formation of
+ 2-dehydro-3-deoxy-D-octonate 8-phosphate from
+ phosphoenolpyruvate and D-arabinose 5-phosphate in LPS
+ biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="2-dehydro-3-deoxyphosphooctonate aldolase"
+ /protein_id="YP_001570228.1"
+ /db_xref="GI:161503116"
+ /db_xref="InterPro:IPR006218"
+ /db_xref="InterPro:IPR006269"
+ /translation="MKQKVVNIGDIKVANDLPFVLFGGMNVLESRDLAMRICEHYVTV
+ TQKLGIPYVFKASFDKANRSSIHSYRGPGLEEGMKIFQELKQTFGVKVITDVHEASQA
+ QPVADVVDVIQLPAFLARQTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFHEGGN
+ DKVILCDRGANFGYDNLVVDMLGFGVMKKVSGNCPVIFDVTHALQCRDPFGAASGGRR
+ GQVTELARAGMAVGLAGLFLESHPDPANAKCDGPSALPLAKLEQFLTQIKAIDDLVKS
+ FDELDTEN"
+ misc_feature 1145827..1146666
+ /locus_tag="SARI_01181"
+ /note="3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate
+ synthase [Cell envelope biogenesis, outer membrane];
+ Region: KdsA; COG2877"
+ /db_xref="CDD:225432"
+ misc_feature 1145830..1146648
+ /locus_tag="SARI_01181"
+ /note="DAHP synthetase I family; Region: DAHP_synth_1;
+ pfam00793"
+ /db_xref="CDD:216123"
+ gene complement(1146729..1147829)
+ /locus_tag="SARI_01182"
+ CDS complement(1146729..1147829)
+ /locus_tag="SARI_01182"
+ /inference="protein motif:HMMPfam:IPR004837"
+ /inference="protein motif:HMMTigr:IPR004713"
+ /inference="similar to AA sequence:INSD:AAL20686.1"
+ /note="'COG: COG0387 Ca2+/H+ antiporter;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="calcium/sodium:proton antiporter"
+ /protein_id="YP_001570229.1"
+ /db_xref="GI:161503117"
+ /db_xref="InterPro:IPR004713"
+ /db_xref="InterPro:IPR004837"
+ /translation="MTHACEAVKTRHKETSLIFPVLALVVLFLWGSSQSLPVVIGINI
+ LALIGILSSAFSVVRHADVLAHRLGEPYGSLILSLSVVILEVSLISALMATGDAAPTL
+ MRDTLYSIIMIVTGGLVGFSLLLGGRKFATQYMNLFGIKQYLIALFPLAIIVLVFPMA
+ LPQANFSTGQALLVALISAAMYGVFLLIQTKTHQSLFIYEHEDESDDDNPHHGKPSAH
+ SSVWHTVWLLVHLIAVIAVTKMNASPLEALLTSMNAPVAFTGFLVALLILSPEGLGAL
+ KAVLNNQVQRAMNLFFGSVLATISLTVPVVTLIAWATGNDLVFGLDAPEMVVMVASLV
+ LCHISFSTGRTNVLNGAAHLALFAAYLMTIFA"
+ misc_feature complement(1146732..1147829)
+ /locus_tag="SARI_01182"
+ /note="calcium/sodium:proton antiporter; Provisional;
+ Region: PRK10599"
+ /db_xref="CDD:182580"
+ misc_feature complement(1146738..1147136)
+ /locus_tag="SARI_01182"
+ /note="Sodium/calcium exchanger protein; Region: Na_Ca_ex;
+ pfam01699"
+ /db_xref="CDD:216653"
+ gene 1148069..1148326
+ /gene="chaB"
+ /locus_tag="SARI_01183"
+ CDS 1148069..1148326
+ /gene="chaB"
+ /locus_tag="SARI_01183"
+ /inference="protein motif:HMMPfam:IPR009317"
+ /inference="similar to AA sequence:INSD:AAO69304.1"
+ /note="in Escherichia coli this protein putatively
+ regulates the sodium/proton (also pH-independent
+ calcium/proton) antiporter chaA; has weak affinity for
+ calcium and magnesium ions"
+ /codon_start=1
+ /transl_table=11
+ /product="cation transport regulator"
+ /protein_id="YP_001570230.1"
+ /db_xref="GI:161503118"
+ /db_xref="InterPro:IPR009317"
+ /translation="MFSLKTEALMPYKAKSDLPDNVRNVLPAHAQDIYKEAFNSAWEQ
+ YKDKADRRDDASREETAHKVAWAAVKNDYEKGEDDKWHKKK"
+ misc_feature 1148096..1148323
+ /gene="chaB"
+ /locus_tag="SARI_01183"
+ /note="cation transport regulator; Reviewed; Region: chaB;
+ PRK09582"
+ /db_xref="CDD:181967"
+ gene complement(1148481..1148834)
+ /locus_tag="SARI_01184"
+ CDS complement(1148481..1148834)
+ /locus_tag="SARI_01184"
+ /inference="protein motif:HMMPfam:IPR003787"
+ /inference="similar to AA sequence:REFSEQ:NP_455734.1"
+ /note="'COG: COG1553 Uncharacterized conserved protein
+ involved in intracellular sulfur reduction;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570231.1"
+ /db_xref="GI:161503119"
+ /db_xref="InterPro:IPR003787"
+ /translation="MQNIVIIVNGAAYGSESLFNSLRLAIALREQESHLDLRLFLMSD
+ AVTAGLRGQKPAEGYNIQQMLEILTAQNVPVKLCKTCADGRGITPLPLIDGVEIGSLV
+ ELAQWTLAADKVLTF"
+ misc_feature complement(1148484..1148831)
+ /locus_tag="SARI_01184"
+ /note="Uncharacterized conserved protein involved in
+ intracellular sulfur reduction [Inorganic ion transport
+ and metabolism]; Region: DsrE; COG1553"
+ /db_xref="CDD:224470"
+ gene 1149055..1150437
+ /locus_tag="SARI_01185"
+ CDS 1149055..1150437
+ /locus_tag="SARI_01185"
+ /inference="similar to AA sequence:REFSEQ:NP_460724.1"
+ /note="'COG: NOG06760 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570232.1"
+ /db_xref="GI:161503120"
+ /translation="MSRTVFLSFPLSLLLLIASGTICAQAQDPFDQNRLPDLGMTPES
+ HEGEKHFAEMAKAFGEASMKNNALDTGEQARQFAFGQVRDVVSDQVNQQVESWLSAWG
+ SASVDVKVDNEGHFNGSRGSWFIPLQDKQRYLTWSLLGLTQQTDGLVSNIGVGQRWVQ
+ NGWLLGYNTFYDNLLDENLQRAGVGAEAWGEYLRLSANYYQPFADWQTHTATLEQRMA
+ RGYDINAQMRLPFYQHINTSVSLEQYFGDSVDLFDSGTGYHNPVALKLGLNYTPVPLL
+ TMTARHKQGESGVSQNNLGLTLNYRFGVPLKKQLAASEVAQSQSLRGSRYDMPQRNAL
+ PTMEYRQRKTLTVFLATPPWDLTPGETVTLKLQVRSVHGIRHLSWQGDTQALSLTAGT
+ DTRNTEGWTIIMPAWDNREDATNCWRLSVVVEDEKGQRVSSNEITLALTEPFITMPDD
+ NPPWQPFQEQ"
+ misc_feature 1149055..1150422
+ /locus_tag="SARI_01185"
+ /note="putative invasin; Provisional; Region: PRK10177"
+ /db_xref="CDD:236661"
+ misc_feature 1149199..1150050
+ /locus_tag="SARI_01185"
+ /note="Protein of unknown function (DUF3442); Region:
+ DUF3442; pfam11924"
+ /db_xref="CDD:221317"
+ gene complement(1150438..1151088)
+ /locus_tag="SARI_01186"
+ CDS complement(1150438..1151088)
+ /locus_tag="SARI_01186"
+ /inference="protein motif:BlastProDom:IPR000792"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000792"
+ /inference="protein motif:HMMPfam:IPR001789"
+ /inference="protein motif:HMMSmart:IPR000792"
+ /inference="protein motif:HMMSmart:IPR001789"
+ /inference="protein motif:ScanRegExp:IPR000792"
+ /inference="protein motif:superfamily:IPR011006"
+ /inference="similar to AA sequence:INSD:AAV77074.1"
+ /note="two-component response regulator NarL;
+ phosphorylated by NarQ; activates transcription of nitrate
+ and nitrite reductase genes and represses transcription of
+ fumarate reductase"
+ /codon_start=1
+ /transl_table=11
+ /product="transcriptional regulator NarL"
+ /protein_id="YP_001570233.1"
+ /db_xref="GI:161503121"
+ /db_xref="InterPro:IPR000792"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR011006"
+ /db_xref="InterPro:IPR011991"
+ /translation="MNNQEPATILLIDDHPMLRTGVKQLVSMAPDVCVVGEASNGEQG
+ IELAESLDPDLILLDLNMPGMNGLETLDKLREKALSGRIVVFSVSNHEEDVVTALKRG
+ ADGYLLKDMEPEDLLKALQQAAAGEMVLSEALTPILAASLRANRATTDRDVTQLTPRE
+ RDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF"
+ misc_feature complement(1150441..1151088)
+ /locus_tag="SARI_01186"
+ /note="transcriptional regulator NarL; Provisional;
+ Region: PRK10651"
+ /db_xref="CDD:182619"
+ misc_feature complement(1150717..1151061)
+ /locus_tag="SARI_01186"
+ /note="Signal receiver domain; originally thought to be
+ unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
+ recently identified in eukaroytes ETR1 Arabidopsis
+ thaliana; this domain receives the signal from the sensor
+ partner in a two-component systems; Region: REC; cd00156"
+ /db_xref="CDD:238088"
+ misc_feature complement(order(1150759..1150764,1150771..1150773,
+ 1150828..1150830,1150888..1150890,1150912..1150914,
+ 1151047..1151052))
+ /locus_tag="SARI_01186"
+ /note="active site"
+ /db_xref="CDD:238088"
+ misc_feature complement(1150912..1150914)
+ /locus_tag="SARI_01186"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238088"
+ misc_feature complement(order(1150888..1150896,1150900..1150905))
+ /locus_tag="SARI_01186"
+ /note="intermolecular recognition site; other site"
+ /db_xref="CDD:238088"
+ misc_feature complement(1150756..1150764)
+ /locus_tag="SARI_01186"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238088"
+ misc_feature complement(1150453..1150623)
+ /locus_tag="SARI_01186"
+ /note="C-terminal DNA-binding domain of LuxR-like
+ proteins. This domain contains a helix-turn-helix motif
+ and binds DNA. Proteins belonging to this group are
+ response regulators; some act as transcriptional
+ activators, others as transcriptional repressors. Many...;
+ Region: LuxR_C_like; cd06170"
+ /db_xref="CDD:99777"
+ misc_feature complement(order(1150480..1150482,1150513..1150527,
+ 1150531..1150536,1150540..1150545,1150567..1150575,
+ 1150612..1150620))
+ /locus_tag="SARI_01186"
+ /note="DNA binding residues [nucleotide binding]"
+ /db_xref="CDD:99777"
+ misc_feature complement(order(1150453..1150458,1150465..1150467,
+ 1150474..1150482,1150573..1150575,1150579..1150581,
+ 1150585..1150587))
+ /locus_tag="SARI_01186"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99777"
+ gene complement(1151081..1152877)
+ /locus_tag="SARI_01187"
+ CDS complement(1151081..1152877)
+ /locus_tag="SARI_01187"
+ /inference="protein motif:Gene3D:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003660"
+ /inference="protein motif:HMMPfam:IPR011712"
+ /inference="protein motif:HMMSmart:IPR003594"
+ /inference="protein motif:HMMSmart:IPR003660"
+ /inference="protein motif:superfamily:IPR003594"
+ /note="'KEGG: stm:STM1766 0. narX; two-component system,
+ NarL family, sensor kinase K07673;
+ COG: COG3850 Signal transduction histidine kinase,
+ nitrate/nitrite-specific;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="nitrate/nitrite sensor protein NarX"
+ /protein_id="YP_001570234.2"
+ /db_xref="GI:448236219"
+ /db_xref="InterPro:IPR003594"
+ /db_xref="InterPro:IPR003660"
+ /db_xref="InterPro:IPR011712"
+ /translation="MLKRCFSPLTLVNQLALIVMLSTAIGVAGMAVSGWLVQGVQGSA
+ HAINKAGSLRMQSYRLLAAIPLDAKDEKLLDEMEQTAFSPELTRAAERDGQQKQLKAL
+ QDYWHNELSPGLQHAQNAHAVAEDVTRFVAGLDRLVTSFDHTTELRIERVVLVHRVMA
+ LFMALLLVFTIIWLRVRLLQPWQQLLSMARAVSQRDFTQRANISGRNEMAALGSALNN
+ MSEELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSQAPLCERLSPVLNGLQ
+ NLTQLHDIELRVYDLEDEDNHQEFTCQSDISCDDKGCRLCPRSALPMINGGTTLKWRL
+ TDSHTQYGILLATLPYGRNLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERA
+ TIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNCSWAQLRELLT
+ TFRLQLTEPGLRPALEASCQEFSARFGFTVKLDYQLPPRLVPSHQAIHLLQIAREALS
+ NALKHSHADDVVVTVTQCGKQVKLKVQDNGCGVPENAERSNHYGMIIMRDRAQSLRGD
+ CQVHRRESGGTAVTVTFIPETNFTETQGDTHE"
+ misc_feature complement(1151084..1152790)
+ /locus_tag="SARI_01187"
+ /note="nitrate/nitrite sensor protein NarX; Provisional;
+ Region: PRK10600"
+ /db_xref="CDD:182581"
+ misc_feature complement(1152491..1152781)
+ /locus_tag="SARI_01187"
+ /note="Type IV pili methyl-accepting chemotaxis transducer
+ N-term; Region: PilJ; pfam13675"
+ /db_xref="CDD:222310"
+ misc_feature complement(1152203..1152346)
+ /locus_tag="SARI_01187"
+ /note="Histidine kinase, Adenylyl cyclase,
+ Methyl-accepting protein, and Phosphatase (HAMP) domain.
+ HAMP is a signaling domain which occurs in a wide variety
+ of signaling proteins, many of which are bacterial. The
+ HAMP domain consists of two alpha helices...; Region:
+ HAMP; cd06225"
+ /db_xref="CDD:100122"
+ misc_feature complement(order(1152209..1152214,1152221..1152226,
+ 1152230..1152235,1152242..1152247,1152251..1152256,
+ 1152302..1152304,1152308..1152313,1152320..1152325,
+ 1152329..1152334,1152341..1152346))
+ /locus_tag="SARI_01187"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:100122"
+ misc_feature complement(1151519..1151710)
+ /locus_tag="SARI_01187"
+ /note="Histidine kinase; Region: HisKA_3; pfam07730"
+ /db_xref="CDD:219540"
+ misc_feature complement(1151129..1151383)
+ /locus_tag="SARI_01187"
+ /note="Histidine kinase-like ATPases; This family includes
+ several ATP-binding proteins for example: histidine
+ kinase, DNA gyrase B, topoisomerases, heat shock protein
+ HSP90, phytochrome-like ATPases and DNA mismatch repair
+ proteins; Region: HATPase_c; cd00075"
+ /db_xref="CDD:238030"
+ misc_feature complement(order(1151141..1151143,1151147..1151152,
+ 1151165..1151167,1151171..1151173,1151219..1151224,
+ 1151255..1151260,1151264..1151266,1151270..1151272,
+ 1151276..1151278,1151342..1151344,1151351..1151353,
+ 1151363..1151365))
+ /locus_tag="SARI_01187"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature complement(1151351..1151353)
+ /locus_tag="SARI_01187"
+ /note="Mg2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature complement(order(1151222..1151224,1151258..1151260,
+ 1151264..1151266))
+ /locus_tag="SARI_01187"
+ /note="G-X-G motif; other site"
+ /db_xref="CDD:238030"
+ gene 1153215..1154612
+ /locus_tag="SARI_01188"
+ CDS 1153215..1154612
+ /locus_tag="SARI_01188"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="protein motif:HMMTigr:IPR004737"
+ /inference="similar to AA sequence:INSD:AAL20680.1"
+ /note="'COG: COG2223 Nitrate/nitrite transporter;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="nitrate/nitrite transport protein NarU"
+ /protein_id="YP_001570235.2"
+ /db_xref="GI:448236220"
+ /db_xref="InterPro:IPR004737"
+ /db_xref="InterPro:IPR011701"
+ /translation="MSHSSAPERATGAVITEWRPEDPAFWQQRGHRVASRNLWISVPC
+ LLLAFCVWMLFSAVAVNLPKVGFNFTTDQLFMLTALPSVSGALLRVPYSFMVPLFGGR
+ RWTAFSTGILIVPCVWLGFAVQDTSTPFSTFIIISLLCGFAGANFASSMANISFFFPK
+ QKQGGALGLNGGLGNMGVSVMQLVAPLVVSLSIFAAFGSHGVEQPDGSQLYLANAAWI
+ WVPFLAIFTLAAWFGMNELATSKASLKEQLPVLRRGHLWIMSLLYLATFGSFIGFSAG
+ FAMLSKTQFPDVQILHYAFFGPFIGALARSAGGAISDRLGGTRVTLINFVLMAIFSGL
+ LFLTLPTGGVGGSFIAFYGVFLALFLTAGLGSGSTFQMISVIFRKLTMDRVKAEGGSE
+ EKAMREAATDTAAALGFISAIGAIGGFFIPKAFGSSLALTGSPVGAMKVFLVFYIACV
+ VITWAVYGRHSKNKK"
+ misc_feature 1153236..1154609
+ /locus_tag="SARI_01188"
+ /note="nitrate/nitrite transport protein NarU;
+ Provisional; Region: PRK15034"
+ /db_xref="CDD:184994"
+ gene complement(1154749..1154919)
+ /locus_tag="SARI_01189"
+ CDS complement(1154749..1154919)
+ /locus_tag="SARI_01189"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570236.1"
+ /db_xref="GI:161503124"
+ /translation="MGVGIDNDQGGQGCKWQANLLHTPFGGGFYLYIFLILLIKNKFT
+ HCMNVKISASGY"
+ gene 1154998..1158741
+ /locus_tag="SARI_01190"
+ CDS 1154998..1158741
+ /locus_tag="SARI_01190"
+ /inference="protein motif:HMMPfam:IPR006656"
+ /inference="protein motif:HMMPfam:IPR006657"
+ /inference="protein motif:HMMTigr:IPR006468"
+ /inference="protein motif:ScanRegExp:IPR006655"
+ /inference="protein motif:superfamily:IPR009010"
+ /note="'KEGG: stm:STM1764 0. narG; nitrate reductase alpha
+ chain K00370;
+ COG: COG5013 Nitrate reductase alpha subunit;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570237.1"
+ /db_xref="GI:161503125"
+ /db_xref="InterPro:IPR006468"
+ /db_xref="InterPro:IPR006655"
+ /db_xref="InterPro:IPR006656"
+ /db_xref="InterPro:IPR006657"
+ /db_xref="InterPro:IPR009010"
+ /translation="MSKFLDRFRYFKQKGETFADGHGQLLETNRDWEDGYRQRWQHDK
+ IVRSTHGVNCTGSCSWKIYVKNGLVTWETQQTDYPRTRPDMPNHEPRGCPRGASYSWY
+ LYSANRLKYPLMRKRLMKMWREAKQLHRDPVEAWASIIEDADKAKSFKQARGRGGFVR
+ SSWQEVNELIAASNVYTVKTYGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFY
+ DWYCDLPPASPQTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGT
+ KTVAVTPDYAEIAKLCDLWLAPKQGTDAAMALAMGHVMLREFHLDNPRQYFTDYVRRY
+ TDMPMLVMLEERDGYYAAGRMLRAADLVDSLGQENNPEWKTVAISSNGEMVAPNGSIG
+ FRWGEKGKWNLEQRDGTTGAETELQLSLLGSQDEIADVGFPYFGGEGSEYFNHVALDN
+ VLLHKLPAKRLQLADGSSALVTTVYDLTMANYGLERGLNDENCAASYDDTKAYTPAWA
+ EQITGVPRAQIIRIAREFADNADKTHGRSMIIVGAGLNHWYHLDMNYRGLINMLVFCG
+ CVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDWQRPARHMNSTSYFYNHSSQWRYETV
+ TAEELLSPMADKSRYSGHLIDFNVRAERMGWLPSAPQLGTNPLYIAREAEKAGMTPVD
+ YTVKSLKEGSIRFAAEQPENGKNHPRNLFIWRSNLLGSSGKGHEYMLKYLLGTEHGIQ
+ GLDLGKQGGVKPEEVEWRDNGLDGKLDLVVTLDFRLSSTCLYSDIVLPTATWYEKDDM
+ NTSDMHPFIHPLSAAVDPAWESKSDWEIYKGIAKKFSEVCVGHLGKETDVVTLPIQHD
+ SAAELAQALDVKDWKKGECDLIPGKTAPHIMTVERDYPATYERFTSIGPLMEKIGNGG
+ KGIAWNTQSEMDLLRKLNYTKADGPAKGQPMLNTAIDAAEMILTLAPETNGQVAVKAW
+ KALSEFTGRDHTHLATNKEEEKIRFRDIQAQPRKIISSPTWSGLEDEHVSYNAGYTNV
+ HELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTRSVKAVMGRKSNGNPEKALN
+ FLTPHQKWGIHSTYSDNLLMLTLSRGGPIVWMSETDAKDLGIEDNDWIEVFNSNGALT
+ ARAVVSQRVPAGMTMMYHAQERIVNLPGSEITQQRGGIHNSVTRITPKPTHMIGGYAQ
+ LAYGFNYYGTVGSNRDEFVVVRKMKNINWLDGEGNDQVQESVK"
+ misc_feature 1155001..1158702
+ /locus_tag="SARI_01190"
+ /note="respiratory nitrate reductase, alpha subunit;
+ Region: narG; TIGR01580"
+ /db_xref="CDD:162434"
+ misc_feature 1155124..>1156020
+ /locus_tag="SARI_01190"
+ /note="Respiratory nitrate reductase A (NarGHI), alpha
+ chain (NarG) and related proteins. Under anaerobic
+ conditions in the presence of nitrate, E. coli synthesizes
+ the cytoplasmic membrane-bound quinol-nitrate
+ oxidoreductase (NarGHI), which reduces nitrate to...;
+ Region: MopB_Nitrate-R-NarG-like; cd02750"
+ /db_xref="CDD:239151"
+ misc_feature order(1155145..1155147,1155157..1155159,1155169..1155171,
+ 1155175..1155177,1155274..1155276)
+ /locus_tag="SARI_01190"
+ /note="[4Fe-4S] binding site [ion binding]; other site"
+ /db_xref="CDD:239151"
+ misc_feature <1156426..>1156746
+ /locus_tag="SARI_01190"
+ /note="Molybdopterin-Binding (MopB) domain of the MopB
+ superfamily of proteins, a large, diverse, heterogeneous
+ superfamily of enzymes that, in general, bind
+ molybdopterin as a cofactor. The MopB domain is found in a
+ wide variety of molybdenum- and...; Region:
+ Molybdopterin-Binding; cl09928"
+ /db_xref="CDD:245203"
+ misc_feature <1157116..1157499
+ /locus_tag="SARI_01190"
+ /note="Molybdopterin-Binding (MopB) domain of the MopB
+ superfamily of proteins, a large, diverse, heterogeneous
+ superfamily of enzymes that, in general, bind
+ molybdopterin as a cofactor. The MopB domain is found in a
+ wide variety of molybdenum- and...; Region:
+ Molybdopterin-Binding; cl09928"
+ /db_xref="CDD:245203"
+ misc_feature <1158097..1158189
+ /locus_tag="SARI_01190"
+ /note="Molybdopterin-Binding (MopB) domain of the MopB
+ superfamily of proteins, a large, diverse, heterogeneous
+ superfamily of enzymes that, in general, bind
+ molybdopterin as a cofactor. The MopB domain is found in a
+ wide variety of molybdenum- and...; Region:
+ Molybdopterin-Binding; cl09928"
+ /db_xref="CDD:245203"
+ misc_feature 1158256..1158675
+ /locus_tag="SARI_01190"
+ /note="Respiratory nitrate reductase A (NarGHI), alpha
+ chain (NarG) and related proteins. Under anaerobic
+ conditions in the presence of nitrate, E. coli synthesizes
+ the cytoplasmic membrane-bound quinol-nitrate
+ oxidoreductase (NarGHI), which reduces nitrate to...;
+ Region: MopB_CT_Nitrate-R-NarG-like; cd02776"
+ /db_xref="CDD:239177"
+ misc_feature order(1158268..1158279,1158286..1158300,1158487..1158489,
+ 1158553..1158555,1158649..1158654)
+ /locus_tag="SARI_01190"
+ /note="molybdopterin cofactor binding site; other site"
+ /db_xref="CDD:239177"
+ gene 1158738..1160273
+ /locus_tag="SARI_01191"
+ CDS 1158738..1160273
+ /locus_tag="SARI_01191"
+ /inference="protein motif:HMMTigr:IPR006547"
+ /inference="similar to AA sequence:REFSEQ:NP_455740.1"
+ /note="'KEGG: stt:t1672 9.3e-287 narH; respiratory nitrate
+ reductase 1 beta chain K00371;
+ COG: COG1140 Nitrate reductase beta subunit;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570238.1"
+ /db_xref="GI:161503126"
+ /db_xref="InterPro:IPR006547"
+ /translation="MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTSREGMEYAWFNNV
+ ESKPGVGFPNDWENQEKWKGGWIRKINGKLQPRMGNRALLLGKIFANPHLPGIDDYYE
+ PFDYDYQTLHTAPESKHQPIARPRSLITGQRMDKITSGPNWEEILGGEFEKRAKDQNF
+ ENMQKAMYGQFENTFMMYLPRLCEHCLNPACVATCPSGAIYKREEDGIVLIDQDKCRG
+ WRMCITGCPYKKIYFNWKSGKSEKCIFCYPRIEAGQPTVCSETCVGRIRYLGVLLYDA
+ DAIESAASTENEKDLYQRQLDVFLDPNDPAVIEQALKDGVPQSVIDAAQQSPVYKMAM
+ DWKLALPLHPEYRTLPMVWYVPPLSPIQSAADAGELGSNGILPNVDSLRIPVQYLANL
+ LTAGDTQPVLLALKRMLAMRHYKRAETVDGKVDTRALEEVGLSEAQAQEMYRYLAIAN
+ YEDRFVVPSSHRELARDAFPEKSGCGFTFGDGCHGSDSKFNLFNSRRIDAIDVTSKTE
+ PHA"
+ misc_feature 1158738..1160270
+ /locus_tag="SARI_01191"
+ /note="Nitrate reductase beta subunit [Energy production
+ and conversion]; Region: NarY; COG1140"
+ /db_xref="CDD:224063"
+ misc_feature 1159359..1159430
+ /locus_tag="SARI_01191"
+ /note="4Fe-4S binding domain; Region: Fer4; cl02805"
+ /db_xref="CDD:243197"
+ gene 1160270..1160980
+ /locus_tag="SARI_01192"
+ CDS 1160270..1160980
+ /locus_tag="SARI_01192"
+ /inference="protein motif:HMMPfam:IPR003765"
+ /inference="protein motif:HMMTigr:IPR003765"
+ /inference="similar to AA sequence:REFSEQ:NP_460718.1"
+ /note="'KEGG: stm:STM1762 5.1e-112 narJ; nitrate reductase
+ delta chain K00373;
+ COG: COG2180 Nitrate reductase delta subunit;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570239.1"
+ /db_xref="GI:161503127"
+ /db_xref="InterPro:IPR003765"
+ /translation="MIELVIVSRLLEYPDAALWQHQQELFDALALSENLDKEDARRLS
+ VFLHDLTAQEILDVQASYSELFDRGRATSLLLFEHVHGESRDRGQAMVDLMAQYEQHG
+ LQLDSRELPDHLPLYLEYLAQLPKSEALGGLQDIAPILALLSARLQQRESQYAVLFDL
+ LLKLANTTIDSDKVAEKIADEVRDDTPQALDAVWEEEQVKFFADQGCGETAISAHQRR
+ FSGAVAPQYLNISNGGQQ"
+ misc_feature 1160270..1160971
+ /locus_tag="SARI_01192"
+ /note="Nitrate reductase delta subunit; Region:
+ Nitrate_red_del; cl00958"
+ /db_xref="CDD:242221"
+ gene 1160980..1161657
+ /locus_tag="SARI_01193"
+ CDS 1160980..1161657
+ /locus_tag="SARI_01193"
+ /inference="protein motif:HMMPfam:IPR003816"
+ /inference="protein motif:HMMTigr:IPR003816"
+ /inference="similar to AA sequence:REFSEQ:NP_460717.1"
+ /note="'KEGG: stm:STM1761 9.7e-118 narI; nitrate reductase
+ gamma chain K00374;
+ COG: COG2181 Nitrate reductase gamma subunit;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570240.1"
+ /db_xref="GI:161503128"
+ /db_xref="InterPro:IPR003816"
+ /translation="MHFLNMFFFDIYPYIAGSVFLIGSWLRYDYGQYTWRAASSQMLD
+ RKGMNLASNLFHIGILGIFAGHFLGMLTPHWMYESFLPIEVKQKMAMIAGGACGVLTL
+ VGGILLLKRRLFSPRVRATTTGADILILSLLVIQCALGLLTIPFSAQHMDGSEMMKLV
+ GWAQSVVTFHGGASEHLDGVAFIFRLHLVLGMTLFLLFPFSRLVHIWSVPVEYLTRKY
+ QLVRARH"
+ misc_feature 1160983..1161654
+ /locus_tag="SARI_01193"
+ /note="respiratory nitrate reductase, gamma subunit;
+ Region: narI; TIGR00351"
+ /db_xref="CDD:232934"
+ misc_feature complement(1161885..1162056)
+ /inference="protein motif:Rfam:RF00391"
+ /note="RtT RNA; Rfam score 145.46; SARI_01194"
+ gene complement(1162063..1162144)
+ /locus_tag="SARI_01195"
+ tRNA complement(1162063..1162144)
+ /locus_tag="SARI_01195"
+ /product="tRNA-Tyr"
+ gene complement(1162184..1162265)
+ /locus_tag="SARI_01196"
+ tRNA complement(1162184..1162265)
+ /locus_tag="SARI_01196"
+ /product="tRNA-Tyr"
+ gene complement(1162424..1163320)
+ /gene="purU"
+ /locus_tag="SARI_01197"
+ CDS complement(1162424..1163320)
+ /gene="purU"
+ /locus_tag="SARI_01197"
+ /inference="protein motif:Gene3D:IPR002376"
+ /inference="protein motif:HMMPfam:IPR002376"
+ /inference="protein motif:HMMPfam:IPR002912"
+ /inference="protein motif:HMMPIR:IPR004810"
+ /inference="protein motif:HMMTigr:IPR004810"
+ /inference="protein motif:superfamily:IPR002376"
+ /inference="similar to AA sequence:REFSEQ:YP_216738.1"
+ /note="produces formate from formyl-tetrahydrofolate which
+ is the major source of formate for PurT in de novo purine
+ nucleotide biosynthesis; has a role in one-carbon
+ metabolism; forms a homohexamer; activated by methionine
+ and inhibited by glycine"
+ /codon_start=1
+ /transl_table=11
+ /product="formyltetrahydrofolate deformylase"
+ /protein_id="YP_001570241.1"
+ /db_xref="GI:161503129"
+ /db_xref="InterPro:IPR002376"
+ /db_xref="InterPro:IPR002912"
+ /db_xref="InterPro:IPR004810"
+ /translation="MTPDSIDTANTLNRIFLAMQSLQRKVLRTICPDQKGLIARITNI
+ CYKHELNIVQNNEFVDHRTGRFFMRTELEGIFNDSTLLADLDSALPEGSVRELNPAGR
+ RRVVILVTKEAHCLGDLLMKANYGGLDVEIAAVIGNHETLRSLVERFEIPFELVSHEG
+ LTREEHDRKMADAIDAHQPDYVVLAKYMRVLTPDFVARFPNKIINIHHSFLPAFIGAR
+ PYHQAYERGVKIIGATAHYVNDNLDEGPIIMQDVIHVDHTYTAEDMMRAGRDVEKNVL
+ SRALYQVLAQRVFVYGNRTIIL"
+ misc_feature complement(1162427..1163266)
+ /gene="purU"
+ /locus_tag="SARI_01197"
+ /note="formyltetrahydrofolate deformylase; Reviewed;
+ Region: purU; PRK06027"
+ /db_xref="CDD:235676"
+ misc_feature complement(<1163099..1163245)
+ /gene="purU"
+ /locus_tag="SARI_01197"
+ /note="N-terminal ACT domain of formyltetrahydrofolate
+ deformylase (F4HF-DF; formyltetrahydrofolate hydrolase);
+ Region: ACT_F4HF-DF; cd04875"
+ /db_xref="CDD:153147"
+ misc_feature complement(1162427..1163014)
+ /gene="purU"
+ /locus_tag="SARI_01197"
+ /note="Formyltetrahydrofolate deformylase (Formyl-FH4
+ hydrolase), C-terminal hydrolase domain; Region:
+ FMT_core_Formyl-FH4-Hydrolase_C; cd08648"
+ /db_xref="CDD:187717"
+ misc_feature complement(order(1162592..1162597,1162604..1162609,
+ 1162613..1162615,1162673..1162675,1162697..1162708,
+ 1162733..1162735,1162748..1162771,1162976..1162981,
+ 1162994..1162996))
+ /gene="purU"
+ /locus_tag="SARI_01197"
+ /note="putative active site [active]"
+ /db_xref="CDD:187717"
+ misc_feature complement(order(1162505..1162507,1162697..1162699,
+ 1162703..1162705,1162763..1162768,1162976..1162981))
+ /gene="purU"
+ /locus_tag="SARI_01197"
+ /note="putative substrate binding site [chemical binding];
+ other site"
+ /db_xref="CDD:187717"
+ misc_feature complement(order(1162592..1162597,1162604..1162609,
+ 1162706..1162708,1162733..1162735,1162748..1162756,
+ 1162760..1162762,1162769..1162771))
+ /gene="purU"
+ /locus_tag="SARI_01197"
+ /note="putative cosubstrate binding site; other site"
+ /db_xref="CDD:187717"
+ misc_feature complement(order(1162592..1162594,1162700..1162702,
+ 1162706..1162708))
+ /gene="purU"
+ /locus_tag="SARI_01197"
+ /note="catalytic site [active]"
+ /db_xref="CDD:187717"
+ gene complement(1163317..1163649)
+ /locus_tag="SARI_01198"
+ CDS complement(1163317..1163649)
+ /locus_tag="SARI_01198"
+ /inference="protein motif:HMMPfam:IPR004027"
+ /inference="similar to AA sequence:REFSEQ:YP_150396.1"
+ /note="'KEGG: pen:PSEEN4477 0.00064 secA; preprotein
+ translocase SecA subunit;
+ COG: COG3012 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570242.1"
+ /db_xref="GI:161503130"
+ /db_xref="InterPro:IPR004027"
+ /translation="MKDADYLIKSWHPTCNAAAFRDDIIAGFANTKWLGLTIFEHNWS
+ EAGNTGYVSFIARFSEQGKTRAIIERSRFIKENGQWYYIDGTRPQLGRNDPCPCGSGK
+ KFKKCCGQ"
+ misc_feature complement(1163365..>1163649)
+ /locus_tag="SARI_01198"
+ /note="hypothetical protein; Provisional; Region:
+ PRK01617"
+ /db_xref="CDD:234966"
+ gene 1163886..1164791
+ /locus_tag="SARI_01199"
+ CDS 1163886..1164791
+ /locus_tag="SARI_01199"
+ /inference="protein motif:HMMPfam:IPR002641"
+ /inference="protein motif:ScanRegExp:IPR001423"
+ /inference="similar to AA sequence:REFSEQ:YP_216736.1"
+ /note="'KEGG: eci:UTI89_C1430 3.1e-137 ychK; hypothetical
+ protein;
+ COG: COG1752 Predicted esterase of the alpha-beta
+ hydrolase superfamily;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570243.1"
+ /db_xref="GI:161503131"
+ /db_xref="InterPro:IPR001423"
+ /db_xref="InterPro:IPR002641"
+ /translation="MRKMKIGLALGSGAARGWSHIGVIKALKQTGIDIDIVAGCSIGS
+ LVGAAYACNKLSALEQWICSFRYWDVLRLMDLSWGRGGLLRGERVFNHYRDIMPVTDF
+ DHCSRRFGAVATNLSTGRELWFTEGDLHLAVRASCSMPGLMSPVEHNGYWLVDGAVVN
+ PVPVSLTRAMGADIVIAVDLQHDAHLMQQDLLSVNVGNINEESDDSLPWHKRLKERFS
+ SLTSRRGVSTPGAMEIMTTSIQVLENRLKRNRMAGDPPDILIQPFCPQISTLDFHRAH
+ VAIAAGQLAVEKKMDELMPLVRTDV"
+ misc_feature 1163886..1164785
+ /locus_tag="SARI_01199"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10279"
+ /db_xref="CDD:182352"
+ misc_feature 1163901..1164425
+ /locus_tag="SARI_01199"
+ /note="Bacterial patatin-like phospholipase domain
+ containing protein 6; Region: Pat_NTE_like_bacteria;
+ cd07228"
+ /db_xref="CDD:132866"
+ misc_feature order(1163922..1163927,1163931..1163933,1164006..1164008,
+ 1164348..1164350)
+ /locus_tag="SARI_01199"
+ /note="active site"
+ /db_xref="CDD:132866"
+ misc_feature 1164000..1164014
+ /locus_tag="SARI_01199"
+ /note="nucleophile elbow; other site"
+ /db_xref="CDD:132866"
+ gene 1164882..1165895
+ /locus_tag="SARI_01200"
+ CDS 1164882..1165895
+ /locus_tag="SARI_01200"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:HMMPfam:IPR001789"
+ /inference="protein motif:HMMSmart:IPR001789"
+ /inference="protein motif:superfamily:IPR011006"
+ /inference="similar to AA sequence:REFSEQ:NP_455747.1"
+ /note="'KEGG: eci:UTI89_C1431 4.0e-160 rssB; RssB/Hnr
+ protein K02485;
+ COG: COG0784 FOG: CheY-like receiver;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="response regulator of RpoS"
+ /protein_id="YP_001570244.1"
+ /db_xref="GI:161503132"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR011006"
+ /translation="MTQPLVGKQILIVEDEPVFRSLLDSWFSSLGATTALAGDGVDAL
+ ELMGHFTPDLMICDIAMPRMNGLKLVENLRNRGDQTPILVISATENMADIAKALRLGV
+ EDVLLKPVKDLNRLRETVFACLYPNMFNSRVEEEERLFRDWDAMVSNPTAAAQLLQEL
+ QPPVQQVISHCRINYRQLVSADQPGLVLDIAPLSDNELAFYCLDVTRAGDNGVLAALL
+ LRALFNGLLQEQLGQQNHRLPELGTLLKQVNHLLRQANLPGQFPLFVGYYHSGLKNLI
+ LVSAGLNATLNTGVHQVQISNGVPLGTLGKAYLNQLSQRCDSWQCQIWGAGGRLRLML
+ SAE"
+ misc_feature 1164912..1165253
+ /locus_tag="SARI_01200"
+ /note="Signal receiver domain; originally thought to be
+ unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
+ recently identified in eukaroytes ETR1 Arabidopsis
+ thaliana; this domain receives the signal from the sensor
+ partner in a two-component systems; Region: REC; cd00156"
+ /db_xref="CDD:238088"
+ misc_feature order(1164921..1164926,1165053..1165055,1165077..1165079,
+ 1165137..1165139,1165194..1165196,1165203..1165208)
+ /locus_tag="SARI_01200"
+ /note="active site"
+ /db_xref="CDD:238088"
+ misc_feature 1164984..1165892
+ /locus_tag="SARI_01200"
+ /note="response regulator of RpoS; Provisional; Region:
+ PRK10693"
+ /db_xref="CDD:182652"
+ misc_feature 1165053..1165055
+ /locus_tag="SARI_01200"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238088"
+ misc_feature order(1165062..1165067,1165071..1165079)
+ /locus_tag="SARI_01200"
+ /note="intermolecular recognition site; other site"
+ /db_xref="CDD:238088"
+ misc_feature 1165203..1165211
+ /locus_tag="SARI_01200"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238088"
+ gene 1166098..1167006
+ /locus_tag="SARI_01201"
+ CDS 1166098..1167006
+ /locus_tag="SARI_01201"
+ /inference="protein motif:HMMPfam:IPR005835"
+ /inference="protein motif:HMMTigr:IPR005771"
+ /inference="similar to AA sequence:REFSEQ:YP_216734.1"
+ /note="'together with GalF subunit composes the
+ UTP--glucose-1-phosphate uridylyltransferase, an enzyme
+ that catalyzes the formation of UDP-glucose from UTP and
+ alpha-D-glucose 1-phosphate; regulates cellular levels of
+ UDP-glucose'"
+ /codon_start=1
+ /transl_table=11
+ /product="UTP--glucose-1-phosphate uridylyltransferase
+ subunit GalU"
+ /protein_id="YP_001570245.1"
+ /db_xref="GI:161503133"
+ /db_xref="InterPro:IPR005771"
+ /db_xref="InterPro:IPR005835"
+ /translation="MAALNSKVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQY
+ VVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEKRVKRQLLEEVQSICPPHV
+ TIMQVRQGLAKGLGHAVLCAYPVVGNEPVAVILPDVILDEYESDLSQDNLAEMIRRFD
+ ETGNSQIMVEPVEDVTAYGVVNCKGIELAPGESVPMVGVVEKPKADVAPSNLAIVGRY
+ VLSADIWALLAKTPPGAGDEIQLTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAF
+ VEYGIRHNSLGAEFKAWLEEEMGIKK"
+ misc_feature 1166122..1166943
+ /locus_tag="SARI_01201"
+ /note="Prokaryotic UGPase catalyses the synthesis of
+ UDP-glucose; Region: UGPase_prokaryotic; cd02541"
+ /db_xref="CDD:133021"
+ misc_feature 1166125..>1166898
+ /locus_tag="SARI_01201"
+ /note="dTDP-glucose pyrophosphorylase [Cell envelope
+ biogenesis, outer membrane]; Region: RfbA; COG1209"
+ /db_xref="CDD:224130"
+ misc_feature order(1166137..1166148,1166188..1166193,1166422..1166424,
+ 1166431..1166442,1166500..1166502,1166506..1166511,
+ 1166629..1166634,1166698..1166703,1166737..1166739,
+ 1166821..1166823)
+ /locus_tag="SARI_01201"
+ /note="active site"
+ /db_xref="CDD:133021"
+ misc_feature order(1166149..1166151,1166158..1166172,1166176..1166184,
+ 1166194..1166202,1166206..1166214,1166224..1166226,
+ 1166296..1166298,1166302..1166310,1166314..1166316,
+ 1166326..1166331,1166416..1166421,1166425..1166427,
+ 1166431..1166433,1166626..1166628,1166809..1166811,
+ 1166881..1166883,1166899..1166907,1166911..1166919,
+ 1166923..1166931,1166938..1166943)
+ /locus_tag="SARI_01201"
+ /note="tetramer interface; other site"
+ /db_xref="CDD:133021"
+ gene complement(1167136..1167549)
+ /locus_tag="SARI_01202"
+ CDS complement(1167136..1167549)
+ /locus_tag="SARI_01202"
+ /inference="protein motif:BlastProDom:IPR001801"
+ /inference="protein motif:HMMPfam:IPR001801"
+ /inference="protein motif:HMMSmart:IPR001801"
+ /inference="similar to AA sequence:INSD:AAO69288.1"
+ /note="'COG: COG2916 DNA-binding protein H-NS;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="global DNA-binding transcriptional dual
+ regulator H-NS"
+ /protein_id="YP_001570246.1"
+ /db_xref="GI:161503134"
+ /db_xref="InterPro:IPR001801"
+ /translation="MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEE
+ SAAAAEVEERTRKLQQYREMLIADGIDPNELLNSMAAAKSGTKAKRAARPAKYSYVDE
+ NGETKTWTGQGRTPAVIKKAMEEQGKQLEDFLIKE"
+ misc_feature complement(1167145..1167549)
+ /locus_tag="SARI_01202"
+ /note="global DNA-binding transcriptional dual regulator
+ H-NS; Provisional; Region: PRK10947"
+ /db_xref="CDD:182858"
+ misc_feature complement(1167145..1167291)
+ /locus_tag="SARI_01202"
+ /note="Domain in histone-like proteins of HNS family;
+ Region: HNS; smart00528"
+ /db_xref="CDD:128801"
+ gene 1168087..1168704
+ /locus_tag="SARI_01203"
+ CDS 1168087..1168704
+ /locus_tag="SARI_01203"
+ /inference="protein motif:HMMPanther:IPR001267"
+ /inference="protein motif:HMMPfam:IPR001267"
+ /inference="protein motif:ScanRegExp:IPR001267"
+ /inference="similar to AA sequence:INSD:AAV77089.1"
+ /note="catalyzes the formation of thymidine 5'-phosphate
+ from thymidine"
+ /codon_start=1
+ /transl_table=11
+ /product="thymidine kinase"
+ /protein_id="YP_001570247.1"
+ /db_xref="GI:161503135"
+ /db_xref="InterPro:IPR001267"
+ /translation="MAQLYFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRF
+ GTGKISSRIGLSSPAKLFNQNTSLFEEIRAENARQTIHCVLVDESQFLTRQQVYQLSE
+ VVDKLDIPVLCYGLRTDFRGELFVGSQYLLSWSDKLVELKTICFCGRKASMVLRLDQD
+ GRPYNEGEQVVIGGNERYVSVCRKHYKDSLEEGSLTEIQERHRHI"
+ misc_feature 1168087..1168647
+ /locus_tag="SARI_01203"
+ /note="thymidine kinase; Provisional; Region: PRK04296"
+ /db_xref="CDD:235272"
+ unsure 1168390..1168742
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(1168931..1171609)
+ /locus_tag="SARI_01204"
+ CDS complement(1168931..1171609)
+ /locus_tag="SARI_01204"
+ /inference="protein motif:HMMPfam:IPR001670"
+ /inference="protein motif:HMMPfam:IPR002086"
+ /inference="protein motif:HMMPIR:IPR012079"
+ /inference="protein motif:ScanRegExp:IPR001670"
+ /note="'KEGG: stm:STM1749 0. adhE; alcohol dehydrogenase /
+ acetaldehyde dehydrogenase K00001:K04072;
+ COG: COG1012 NAD-dependent aldehyde dehydrogenases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="bifunctional acetaldehyde-CoA/alcohol
+ dehydrogenase"
+ /protein_id="YP_001570248.1"
+ /db_xref="GI:161503136"
+ /db_xref="InterPro:IPR001670"
+ /db_xref="InterPro:IPR002086"
+ /db_xref="InterPro:IPR012079"
+ /translation="MAVTNVAELNALVERVKKAQREYASFTQEQVDKIFRAAALAAAD
+ ARIPLAKMAVAESGMGIIEDKVIKNHFASEYIYNAYKDEKTCGVLSEDDTFGTITIAE
+ PIGIICGIVPTTNPTSTAIFKSLISLKTRNAIIFSPHPRAKEATNKAADIVLQAAIAA
+ GAPKDLIGWIDQPSVELSNALMHHPDINLILATGGPGMVKAAYSSGKPAIGVGAGNTP
+ VVIDETADIKRAVASVLMSKTFDNGVICASEQSVVVVDSVYDAVRERFASHGGYMLQG
+ QELKAVQNVILKNGALNAAIVGQPAYKIAELAGFSVPETTKILIGEVTVVDESEPFAH
+ EKLSPTLAMYRAKDFEEAVEKAEKLVAMGGIGHTSCLYTDQDNQQDRVNYFGQKMKTA
+ RILINTPASQGGIGDLYNFKLAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRAEN
+ MLWHKLPKSIYFRRGSLPIALDEVITDGHKRALIVTDRFLFNNGYADQITSVLKAAGV
+ ETEVFFEVEADPTLSVVRKGAELANSFKPDVIIALGGGSPMDAAKIMWVMYEHPETHF
+ EELALRFMDIRKRIYKFPKMGVKAKMIAVTTTSGTGSEVTPFAVVTDDATGQKYPLAD
+ YALTPDMAIVDANLVMDMPKSLCAFGGLDAVTHALEAYVSVLASEFSDGQALQALKLL
+ KENLPASYHEGSKNPVARERVHSAATIAGIAFANAFLGVCHSMAHKLGSQFHIPHGLA
+ NALLICNVIRYNANDNPTKQTAFSQYDRPQARRRYAEIADHLGLSAPGDRTAAKIEKL
+ LAWLESIKAELGIPKSIREAGVQEADFLANVDKLSEDAFDDQCTGANPRYPLISELKQ
+ ILLDTYYGRDFTEGEVAAKKDVVATPKAEKKAKKSA"
+ misc_feature complement(1169024..1171609)
+ /locus_tag="SARI_01204"
+ /note="bifunctional acetaldehyde-CoA/alcohol
+ dehydrogenase; Provisional; Region: PRK13805"
+ /db_xref="CDD:237515"
+ misc_feature complement(1170269..1171585)
+ /locus_tag="SARI_01204"
+ /note="Coenzyme A acylating aldehyde dehydrogenase (ACDH),
+ ALDH family 20-like; Region: ALDH_F20_ACDH; cd07122"
+ /db_xref="CDD:143440"
+ misc_feature complement(1170872..1170874)
+ /locus_tag="SARI_01204"
+ /note="putative catalytic cysteine [active]"
+ /db_xref="CDD:143440"
+ misc_feature complement(1169033..1170241)
+ /locus_tag="SARI_01204"
+ /note="C-terminal alcohol dehydrogenase domain of the
+ acetaldehyde dehydrogenase-alcohol dehydrogenase
+ bifunctional two-domain protein (AAD); Region: AAD_C;
+ cd08178"
+ /db_xref="CDD:173937"
+ misc_feature complement(order(1169399..1169401,1169429..1169431,
+ 1169441..1169443,1169639..1169641,1169651..1169653,
+ 1169672..1169674,1169696..1169698,1169750..1169755,
+ 1169810..1169812,1169816..1169821,1169951..1169953,
+ 1169960..1169962,1169969..1169977,1170149..1170151))
+ /locus_tag="SARI_01204"
+ /note="putative active site [active]"
+ /db_xref="CDD:173937"
+ misc_feature complement(order(1169399..1169401,1169441..1169443,
+ 1169639..1169641,1169651..1169653))
+ /locus_tag="SARI_01204"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:173937"
+ unsure 1169822..1169919
+ /note="Sequence derived from one plasmid subclone"
+ gene 1172086..1172733
+ /locus_tag="SARI_01205"
+ CDS 1172086..1172733
+ /locus_tag="SARI_01205"
+ /inference="protein motif:HMMPfam:IPR002771"
+ /inference="protein motif:HMMTigr:IPR002771"
+ /inference="protein motif:superfamily:IPR011014"
+ /inference="similar to AA sequence:INSD:AAV77091.1"
+ /note="'COG: COG2095 Multiple antibiotic transporter;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570249.1"
+ /db_xref="GI:161503137"
+ /db_xref="InterPro:IPR002771"
+ /db_xref="InterPro:IPR011014"
+ /translation="MIQTLFDFPVYFKFFIGLFALVNPVGIIPVFISMTSYQTATARN
+ KTNLTANLSVAIILWSSLFLGDGILQLFGISIDSFRIAGGILVVTIAMSMISGKLGED
+ KQNKQEKSETAIRESIGVVPLALPLMAGPGAISSTIVWGTRYHSIAHLLGFSVAIALF
+ ALCCWGVFRMAPWLVRLLGQTGINVITRIMGLLLMALGIEFIVTGIKGIFPGLLN"
+ misc_feature 1172089..1172730
+ /locus_tag="SARI_01205"
+ /note="hypothetical protein; Provisional; Region:
+ PRK11111"
+ /db_xref="CDD:236850"
+ gene complement(1172750..1172878)
+ /locus_tag="SARI_01206"
+ CDS complement(1172750..1172878)
+ /locus_tag="SARI_01206"
+ /note="'Psort location: extracellular, including cell
+ wall, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570250.1"
+ /db_xref="GI:161503138"
+ /translation="MINKNKQYKAVLVFLIISALNTHQNNKFYVRMSQGGSLGRRL"
+ gene 1173497..1175128
+ /locus_tag="SARI_01207"
+ CDS 1173497..1175128
+ /locus_tag="SARI_01207"
+ /inference="protein motif:HMMPfam:IPR000914"
+ /inference="protein motif:ScanRegExp:IPR000914"
+ /inference="similar to AA sequence:REFSEQ:YP_216729.1"
+ /note="'KEGG: shn:Shewana3_2650 1.1e-20 acetate kinase
+ K00925;
+ COG: COG4166 ABC-type oligopeptide transport system,
+ periplasmic component;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570251.1"
+ /db_xref="GI:161503139"
+ /db_xref="InterPro:IPR000914"
+ /translation="MSNITKKSLIAAGILAALMAASAANAADVPAGVQLADKQTLVRN
+ NGSEVQSLDPHKIEGVPESNVNRDLFEGLLISDVEGHPSPGVAEKWENKDFKVWTFHL
+ RKNAKWSDGTPVTASDFVYSWQRLADPNTASPYASYLQYGHIANIDDIIAGKKPATEL
+ GVKALDDHTLEVTLGEPVPYFYKLLVHPSVSPVPKSAVEKFGDKWTQPANIVTNGAYK
+ LKNWVVNERIVLERNPQYWDNDKTVINQVTYLPISSEVTDVNRYRSGEIDMTYNNMPI
+ ELFQKLKKEIPNEVRVDPYLCTYYYEINNQKAPFNDVRVRTALKLALDRDIIVNKVKN
+ QGDLPGYSYTPPYTDGAKLVEPEWFKWSQKKRNEEAKKLLTEAGFTADKPLTLDLLYN
+ TSDLHKKLAIAVASIWKKNLGANVKLENQEWKTFLDTRHQGAFDVARAAWCADYNEPT
+ SFLNTMLSDSSNNTAHYKSPAFDKLIADTLKVTDDAQRSELYAKAEQQLDQDSAIVPV
+ YYYVNARLVKPWVGGYTGKDPLDNIYVKNLYIIKH"
+ misc_feature 1173497..1175125
+ /locus_tag="SARI_01207"
+ /note="oligopeptide ABC transporter substrate-binding
+ protein OppA; Provisional; Region: PRK15104"
+ /db_xref="CDD:185059"
+ misc_feature 1173611..1175116
+ /locus_tag="SARI_01207"
+ /note="The substrate-binding component of an ABC-type
+ oligopetide import system contains the type 2 periplasmic
+ binding fold; Region: PBP2_OppA; cd08504"
+ /db_xref="CDD:173869"
+ misc_feature order(1173683..1173685,1174307..1174309,1174379..1174381,
+ 1174763..1174765,1174811..1174813,1174817..1174831,
+ 1175027..1175029)
+ /locus_tag="SARI_01207"
+ /note="peptide binding site [polypeptide binding]; other
+ site"
+ /db_xref="CDD:173869"
+ gene 1175251..1176171
+ /gene="oppB"
+ /locus_tag="SARI_01208"
+ CDS 1175251..1176171
+ /gene="oppB"
+ /locus_tag="SARI_01208"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="similar to AA sequence:SwissProt:P08005"
+ /note="'KEGG: rha:RHA1_ro09047 2.4e-43 ABC peptide
+ transporter, permease component K02033;
+ COG: COG0601 ABC-type dipeptide/oligopeptide/nickel
+ transport systems, permease components;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="oligopeptide transporter permease"
+ /protein_id="YP_001570252.1"
+ /db_xref="GI:161503140"
+ /db_xref="InterPro:IPR000515"
+ /translation="MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGERALPPE
+ VLANIEAKYHLNDPIMTQYFSYLKQLAHGDFGPSFKYKDYTVNDLVASSFPVSAKLGA
+ AAFLLAVIIGVSAGVIAALKQNTRWDYTVMGFAMTGVVIPSFVVAPLLVMVFAITLQW
+ LPGGGWNGGALKFMILPMVALSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRR
+ IIFRHALKPALLPVLSYMGPAFVGIITGSMVIETIYGLPGIGQLFVNGALNRDYSLVL
+ SLTILVGALTILFNAIVDVLYAVIDPKIRY"
+ misc_feature 1175251..1176168
+ /gene="oppB"
+ /locus_tag="SARI_01208"
+ /note="oligopeptide transporter permease; Reviewed;
+ Region: oppB; PRK09471"
+ /db_xref="CDD:181886"
+ misc_feature 1175530..1176114
+ /gene="oppB"
+ /locus_tag="SARI_01208"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature order(1175578..1175583,1175590..1175595,1175608..1175610,
+ 1175641..1175652,1175656..1175685,1175692..1175697,
+ 1175701..1175703,1175800..1175805,1175809..1175811,
+ 1175815..1175817,1175824..1175829,1175833..1175835,
+ 1175845..1175850,1175857..1175859,1175908..1175910,
+ 1175950..1175955,1175962..1175964,1175983..1175994,
+ 1176001..1176006,1176031..1176036,1176064..1176069,
+ 1176076..1176081,1176085..1176090,1176097..1176102,
+ 1176109..1176114)
+ /gene="oppB"
+ /locus_tag="SARI_01208"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(1175659..1175703,1175983..1176000)
+ /gene="oppB"
+ /locus_tag="SARI_01208"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(1175701..1175703,1175785..1175787,1176001..1176003,
+ 1176025..1176027,1176034..1176036,1176064..1176066)
+ /gene="oppB"
+ /locus_tag="SARI_01208"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(1175860..1175898,1175914..1175919,1175929..1175931)
+ /gene="oppB"
+ /locus_tag="SARI_01208"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene 1176186..1177094
+ /locus_tag="SARI_01209"
+ CDS 1176186..1177094
+ /locus_tag="SARI_01209"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="similar to AA sequence:SwissProt:P08006"
+ /note="'KEGG: baa:BA_0884 0.0024 binding-protein-dependent
+ transport systems inner membrane component K00294;
+ COG: COG1173 ABC-type dipeptide/oligopeptide/nickel
+ transport systems, permease components;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570253.1"
+ /db_xref="GI:161503141"
+ /db_xref="InterPro:IPR000515"
+ /translation="MMLSKKNSETLENFSEKLEVEGRSLWQDARRRFMHNRAAVTSLI
+ VLFLIALFVTAAPMLSQFTYFDTDWGMMSSAPDMASGHYFGTDSSGRDLLVRVAIGGR
+ ISLMVGIAAALVAVIVGTLYGSLSGYLGGKIDSVMMRLLEILNSFPFMFFVILLVTFF
+ GQNILLIFVAIGMVSWLDMARIVRGQTLSLKRKEFIEAAQVGGVSTASIVIRHIVPNV
+ LGVVVVYASLLVPSMILFESFLSFLGLGTQEPLSSWGALLSDGANSMEVSPWLLLFPA
+ GFLVVTLFCFNFIGDGLRDALDPKDR"
+ misc_feature 1176186..1177091
+ /locus_tag="SARI_01209"
+ /note="oligopeptide ABC transporter permease OppC;
+ Provisional; Region: PRK15406"
+ /db_xref="CDD:185304"
+ misc_feature 1176249..1176413
+ /locus_tag="SARI_01209"
+ /note="N-terminal TM domain of oligopeptide transport
+ permease C; Region: OppC_N; pfam12911"
+ /db_xref="CDD:221848"
+ misc_feature 1176579..>1176887
+ /locus_tag="SARI_01209"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature order(1176594..1176605,1176609..1176638,1176645..1176650,
+ 1176654..1176656,1176705..1176710,1176714..1176716,
+ 1176720..1176722,1176729..1176734,1176738..1176740,
+ 1176750..1176755,1176762..1176764,1176813..1176815,
+ 1176855..1176860,1176867..1176869)
+ /locus_tag="SARI_01209"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature 1176612..1176656
+ /locus_tag="SARI_01209"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(1176765..1176803,1176819..1176824,1176834..1176836)
+ /locus_tag="SARI_01209"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene 1177106..1178119
+ /gene="oppD"
+ /locus_tag="SARI_01210"
+ CDS 1177106..1178119
+ /gene="oppD"
+ /locus_tag="SARI_01210"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMPfam:IPR013563"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR010066"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:REFSEQ:NP_460702.1"
+ /note="'KEGG: rru:Rru_A0589 1.3e-97 oligopeptide/dipeptide
+ ABC transporter, ATP-binding protein-like K02031;
+ COG: COG0444 ABC-type dipeptide/oligopeptide/nickel
+ transport system, ATPase component;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="oligopeptide transporter ATP-binding component"
+ /protein_id="YP_001570254.1"
+ /db_xref="GI:161503142"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR010066"
+ /db_xref="InterPro:IPR013563"
+ /translation="MSLSETASATQAQQQANVLLEVNDLRVTFTTPDGDVTAVNDLNF
+ TLHAGETLGIVGESGSGKSQTAFALMGLLATNGRIGGSAAFNGREILNLPERELNTLR
+ AEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFDESVRMLDAVKMPEARK
+ RMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREF
+ NTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGKASDVFYQPVHPYSIGLLNAVPRLD
+ GEEGEMLTIPGNPPNLLRLPKGCPFQPRCPYAMEICNNAPPLEVFSPGRLRACFKPVE
+ ELL"
+ misc_feature 1177154..1178113
+ /gene="oppD"
+ /locus_tag="SARI_01210"
+ /note="oligopeptide transporter ATP-binding component;
+ Provisional; Region: oppD; PRK09473"
+ /db_xref="CDD:181888"
+ misc_feature 1177160..1177858
+ /gene="oppD"
+ /locus_tag="SARI_01210"
+ /note="ATP-binding cassette domain of nickel/oligopeptides
+ specific transporters; Region: ABC_NikE_OppD_transporters;
+ cd03257"
+ /db_xref="CDD:213224"
+ misc_feature 1177271..1177294
+ /gene="oppD"
+ /locus_tag="SARI_01210"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213224"
+ misc_feature order(1177280..1177285,1177289..1177297,1177436..1177438,
+ 1177682..1177687,1177784..1177786)
+ /gene="oppD"
+ /locus_tag="SARI_01210"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213224"
+ misc_feature 1177427..1177438
+ /gene="oppD"
+ /locus_tag="SARI_01210"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213224"
+ misc_feature 1177610..1177639
+ /gene="oppD"
+ /locus_tag="SARI_01210"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213224"
+ misc_feature 1177670..1177687
+ /gene="oppD"
+ /locus_tag="SARI_01210"
+ /note="Walker B; other site"
+ /db_xref="CDD:213224"
+ misc_feature 1177694..1177705
+ /gene="oppD"
+ /locus_tag="SARI_01210"
+ /note="D-loop; other site"
+ /db_xref="CDD:213224"
+ misc_feature 1177772..1177792
+ /gene="oppD"
+ /locus_tag="SARI_01210"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213224"
+ misc_feature 1177850..1178098
+ /gene="oppD"
+ /locus_tag="SARI_01210"
+ /note="Oligopeptide/dipeptide transporter, C-terminal
+ region; Region: oligo_HPY; cl07097"
+ /db_xref="CDD:244611"
+ gene 1178116..1179120
+ /locus_tag="SARI_01211"
+ CDS 1178116..1179120
+ /locus_tag="SARI_01211"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMPfam:IPR013563"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR010066"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:SwissProt:P08007"
+ /note="'KEGG: bur:Bcep18194_B0119 8.4e-96
+ oligopeptide/dipeptide ABC transporter, ATPase subunit
+ K02032;
+ COG: COG4608 ABC-type oligopeptide transport system,
+ ATPase component;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570255.1"
+ /db_xref="GI:161503143"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR010066"
+ /db_xref="InterPro:IPR013563"
+ /translation="MNAAIEQRKVLLEIADLKVHFDIKEGKQWFWQPPKTLKAVDGVT
+ LRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGKVAWLGKDLLGMRPDEWREVRSD
+ IQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQDVRDRVKAMMLKVGLLPNLINR
+ YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSL
+ IFIAHDLAVVKHISDRVLVMYLGHAIELGTYDEVYHNPLHPYTKALMSAVPIPDPDLE
+ RNKTIQLLEGELPSPINPPSGCVFRTRCPIAGPECAQTRPVLEGSFRHAVSCLKVDPL
+ "
+ misc_feature 1178131..1179117
+ /locus_tag="SARI_01211"
+ /note="oligopeptide ABC transporter ATP-binding protein
+ OppF; Provisional; Region: PRK15079"
+ /db_xref="CDD:185037"
+ misc_feature 1178146..1178856
+ /locus_tag="SARI_01211"
+ /note="ATP-binding cassette domain of nickel/oligopeptides
+ specific transporters; Region: ABC_NikE_OppD_transporters;
+ cd03257"
+ /db_xref="CDD:213224"
+ misc_feature 1178284..1178307
+ /locus_tag="SARI_01211"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213224"
+ misc_feature order(1178293..1178298,1178302..1178310,1178437..1178439,
+ 1178680..1178685,1178782..1178784)
+ /locus_tag="SARI_01211"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213224"
+ misc_feature 1178428..1178439
+ /locus_tag="SARI_01211"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213224"
+ misc_feature 1178608..1178637
+ /locus_tag="SARI_01211"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213224"
+ misc_feature 1178668..1178685
+ /locus_tag="SARI_01211"
+ /note="Walker B; other site"
+ /db_xref="CDD:213224"
+ misc_feature 1178692..1178703
+ /locus_tag="SARI_01211"
+ /note="D-loop; other site"
+ /db_xref="CDD:213224"
+ misc_feature 1178770..1178790
+ /locus_tag="SARI_01211"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213224"
+ misc_feature 1178839..1179105
+ /locus_tag="SARI_01211"
+ /note="oligopeptide/dipeptide ABC transporter, ATP-binding
+ protein, C-terminal domain; Region: oligo_HPY; TIGR01727"
+ /db_xref="CDD:213647"
+ gene 1179180..1180004
+ /locus_tag="SARI_01212"
+ CDS 1179180..1180004
+ /locus_tag="SARI_01212"
+ /inference="protein motif:HMMPfam:IPR005821"
+ /inference="similar to AA sequence:REFSEQ:NP_460700.1"
+ /note="'COG: COG1226 Kef-type K+ transport systems,
+ predicted NAD-binding component;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570256.1"
+ /db_xref="GI:161503144"
+ /db_xref="InterPro:IPR005821"
+ /translation="MSSVRRRLYHNLFDLTTRSGRRFEGLCALFALLSVLVIFVESGI
+ GTEYHLTFDEWHIFVWLELCITLIFTGEYLIRLFSWPDPAKYVFSFWGFVDLVTILPL
+ YVMWLWPEISLNYLFAWRAMRAIRVLRILKLLRFMPSLRVFWSAIISARHQLILFYSF
+ IAIVMIIFGALMYLIEGPKCGFTTLNASVYWAIVTVTTVGYGDITPHTPLGRIVASVL
+ ILIGYSVIAIPTGLITTHMSSAFQKRQWQRKCPQCQQSQHEHNAQYCNRCGSKLPD"
+ misc_feature 1179357..1179878
+ /locus_tag="SARI_01212"
+ /note="Ion transport protein; Region: Ion_trans;
+ pfam00520"
+ /db_xref="CDD:215968"
+ misc_feature 1179657..1179881
+ /locus_tag="SARI_01212"
+ /note="Ion channel; Region: Ion_trans_2; pfam07885"
+ /db_xref="CDD:219619"
+ misc_feature 1179918..1179995
+ /locus_tag="SARI_01212"
+ /note="zinc-ribbon domain; Region: zf-ribbon_3; pfam13248"
+ /db_xref="CDD:205428"
+ misc_feature 1179927..>1180001
+ /locus_tag="SARI_01212"
+ /note="Double zinc ribbon; Region: DZR; pfam12773"
+ /db_xref="CDD:221766"
+ gene complement(1180048..1180377)
+ /locus_tag="SARI_01213"
+ CDS complement(1180048..1180377)
+ /locus_tag="SARI_01213"
+ /inference="protein motif:BlastProDom:IPR007376"
+ /inference="protein motif:HMMPfam:IPR007376"
+ /inference="protein motif:HMMPIR:IPR007376"
+ /inference="similar to AA sequence:INSD:AAV77098.1"
+ /note="highly acidic protein; the structure of the
+ Haemophilus influenzae protein shows similarity to uracil
+ DNA glycosylase inhibitor (Ugi); binds heat-unstable
+ protein (HU-alpha) which is a histone-like protein"
+ /codon_start=1
+ /transl_table=11
+ /product="dsDNA-mimic protein"
+ /protein_id="YP_001570257.1"
+ /db_xref="GI:161503145"
+ /db_xref="InterPro:IPR007376"
+ /translation="MEMDLNNRLTEDETLEQAYDIFLELAADNLDPADIILFNLQFEE
+ RGGAELFDPSEEWQEHVDFDLNPDFFAEVVIGLADTEDGEINNIFARVLLCREKNHKL
+ CHILWRE"
+ misc_feature complement(1180051..1180371)
+ /locus_tag="SARI_01213"
+ /note="dsDNA-mimic protein; Reviewed; Region: PRK05094"
+ /db_xref="CDD:179934"
+ unsure 1180288..1180508
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(1180411..1181871)
+ /gene="cls"
+ /locus_tag="SARI_01214"
+ CDS complement(1180411..1181871)
+ /gene="cls"
+ /locus_tag="SARI_01214"
+ /inference="protein motif:HMMPfam:IPR001736"
+ /inference="protein motif:HMMSmart:IPR001736"
+ /inference="similar to AA sequence:INSD:AAO69278.1"
+ /note="catalyzes the transfer of a phosphatidyl group to
+ phosphodidylglycerol to form cardiolipin
+ (diphosphatidylglycerol)"
+ /codon_start=1
+ /transl_table=11
+ /product="cardiolipin synthetase"
+ /protein_id="YP_001570258.1"
+ /db_xref="GI:161503146"
+ /db_xref="InterPro:IPR001736"
+ /translation="MTTFYTVVSWLVILGYWVLIAGVTLRILMKRRAVPSAMAWLLII
+ YILPLVGIIAYLSVGELHLGKRRAERARAMWPSTAKWLNDLKACKHIFAQENSSVASS
+ LFKLCERRQGIAGVKGNQLQLLTDSDDVMQALIRDIQLARHNIEMVFYIWQPGGMADQ
+ VAESLMAAARRGIHCRLMLDSAGSVAFFRSPWAAMMRNAGIEVVEALKVNLMRVFLRR
+ MDLRQHRKMVMIDNYIAYTGSMNMVDPRFFKQDAGVGQWVDLMARMEGPVATAMGIVY
+ SCDWEIETGKRILPPSPDVNIMPFEQASGHTIHTIASGPGFPEDLIHQALLTATYAAR
+ EYLIMTTPYFVPSDDLLHAICTAAQRGVDVSIILPRKNDSLLVGWASRAFFSELLAAG
+ VKIYQFEGGLLHTKSVLVDGELSLVGTVNLDMRSLWLNFEITLVIDDTGFGADLAAVQ
+ DDYISRSRLLDARLWVKRPLWQRITERLFYFFSPLL"
+ misc_feature complement(1180414..1181862)
+ /gene="cls"
+ /locus_tag="SARI_01214"
+ /note="cardiolipin synthetase; Reviewed; Region: cls;
+ PRK01642"
+ /db_xref="CDD:234967"
+ misc_feature complement(1181695..1181826)
+ /gene="cls"
+ /locus_tag="SARI_01214"
+ /note="Phospholipase_D-nuclease N-terminal; Region:
+ PLDc_N; pfam13396"
+ /db_xref="CDD:222100"
+ misc_feature complement(1181029..1181520)
+ /gene="cls"
+ /locus_tag="SARI_01214"
+ /note="Catalytic domain, repeat 1, of Escherichia coli
+ cardiolipin synthase and similar proteins; Region:
+ PLDc_EcCLS_like_1; cd09152"
+ /db_xref="CDD:197250"
+ misc_feature complement(order(1181095..1181097,1181149..1181151,
+ 1181155..1181157,1181194..1181196,1181200..1181202))
+ /gene="cls"
+ /locus_tag="SARI_01214"
+ /note="putative active site [active]"
+ /db_xref="CDD:197250"
+ misc_feature complement(1181200..1181202)
+ /gene="cls"
+ /locus_tag="SARI_01214"
+ /note="catalytic site [active]"
+ /db_xref="CDD:197250"
+ misc_feature complement(1180420..1180941)
+ /gene="cls"
+ /locus_tag="SARI_01214"
+ /note="Catalytic domain, repeat 2, of Escherichia coli
+ cardiolipin synthase and similar proteins; Region:
+ PLDc_EcCLS_like_2; cd09158"
+ /db_xref="CDD:197255"
+ misc_feature complement(order(1180576..1180578,1180609..1180611,
+ 1180615..1180617,1180654..1180656,1180660..1180662))
+ /gene="cls"
+ /locus_tag="SARI_01214"
+ /note="putative active site [active]"
+ /db_xref="CDD:197255"
+ misc_feature complement(1180660..1180662)
+ /gene="cls"
+ /locus_tag="SARI_01214"
+ /note="catalytic site [active]"
+ /db_xref="CDD:197255"
+ gene 1181999..1182187
+ /locus_tag="SARI_01215"
+ CDS 1181999..1182187
+ /locus_tag="SARI_01215"
+ /inference="similar to AA sequence:INSD:ABJ00664.1"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570259.1"
+ /db_xref="GI:161503147"
+ /translation="MRVVNMKRSRTEVGRWRMLRQAGRRKARWLEGQSRRNMRIHTIR
+ KCIFNRQRNSLLFAIHGV"
+ gene complement(1182231..1182527)
+ /locus_tag="SARI_01216"
+ CDS complement(1182231..1182527)
+ /locus_tag="SARI_01216"
+ /inference="protein motif:HMMPfam:IPR005545"
+ /inference="similar to AA sequence:INSD:AAL20656.1"
+ /note="'unknown function; YciI from Haemophilus influenzae
+ presents crystal structure similarity to a muconolactone
+ isomerase, but does not seem to catalyze any of the
+ predicted reactions based on sequence and structure
+ similarity'"
+ /codon_start=1
+ /transl_table=11
+ /product="YciI-like protein"
+ /protein_id="YP_001570260.1"
+ /db_xref="GI:161503148"
+ /db_xref="InterPro:IPR005545"
+ /translation="MLYVIYSQDNANSLEKRLSVRPAHLARLQLLHDEGRLLTAGPMP
+ AVDSNDPGVAGFTGSTVIAEFETLEAAQSWADADPYVAAGVYAQVLVKPYKKIF"
+ misc_feature complement(1182234..1182527)
+ /locus_tag="SARI_01216"
+ /note="YciI-like protein; Reviewed; Region: PRK11370"
+ /db_xref="CDD:183103"
+ unsure 1182232..1182409
+ /note="Sequence derived from one plasmid subclone"
+ gene 1182751..1183473
+ /locus_tag="SARI_01217"
+ CDS 1182751..1183473
+ /locus_tag="SARI_01217"
+ /inference="protein motif:FPrintScan:IPR003538"
+ /inference="protein motif:HMMPfam:IPR003538"
+ /inference="protein motif:HMMTigr:IPR006260"
+ /inference="similar to AA sequence:REFSEQ:YP_150413.1"
+ /note="'membrane spanning protein in TonB-ExbB-ExbD
+ complex; transduces proton motive force of the cytoplasmic
+ membrane to outer membrane transporters; involved in the
+ transport of ron-siderophore complexes, vitamin B12 and
+ colicins'"
+ /codon_start=1
+ /transl_table=11
+ /product="transport protein TonB"
+ /protein_id="YP_001570261.1"
+ /db_xref="GI:161503149"
+ /db_xref="InterPro:IPR003538"
+ /db_xref="InterPro:IPR006260"
+ /translation="MTLDLPRRFPWPTLLSVGIHGAVVAGLLYTSVHQVIELPAPAQP
+ ITVTMVSPADLEPPQAVQPPPEPMVEPEPEPEPIPEPPKEAPVVIEKPKHKPKPKPKP
+ KPVKKVEEQPKREVKPTKPRPASPFENTAPARPISSTASATSKPAASVPTGPRALSRN
+ QPQYPARAQALRIEGRVKVKFDVTSAGRVENVQILSAQPANMFEREVKNAMRKWRYEA
+ GKPGSGLVVNIIFRLNGTAQIE"
+ misc_feature <1183108..1183470
+ /locus_tag="SARI_01217"
+ /note="transport protein TonB; Provisional; Region:
+ PRK10819"
+ /db_xref="CDD:236768"
+ misc_feature 1183231..1183449
+ /locus_tag="SARI_01217"
+ /note="Gram-negative bacterial tonB protein; Region: TonB;
+ pfam03544"
+ /db_xref="CDD:217607"
+ gene complement(1183543..1183944)
+ /locus_tag="SARI_01218"
+ CDS complement(1183543..1183944)
+ /locus_tag="SARI_01218"
+ /inference="protein motif:HMMPfam:IPR006683"
+ /inference="similar to AA sequence:INSD:AAX65638.1"
+ /note="YciA; hydrolase that catalyzes the hydrolysis of
+ the thioester bond in palmitoyl-CoA and malonyl-CoA;
+ member of the the acyl coenzyme A hydrolase family of
+ proteins"
+ /codon_start=1
+ /transl_table=11
+ /product="acyl-CoA thioester hydrolase"
+ /protein_id="YP_001570262.1"
+ /db_xref="GI:161503150"
+ /db_xref="InterPro:IPR006683"
+ /translation="MTTIDNTPQGELVLRTLAMPADTNANGDIFGGWLMSQMDIGGAI
+ LAKEIAHGRVVTVRVEGMTFLRPVAVGDVVCCYARCVKRGRTSISINIEVWVKKVASE
+ PIGQRYKATEALFIYVAVDPNGRPRPLPVQG"
+ misc_feature complement(1183555..1183926)
+ /locus_tag="SARI_01218"
+ /note="Brown fat-inducible thioesterase (BFIT). Brain
+ acyl-CoA hydrolase (BACH). These enzymes deacylate
+ long-chain fatty acids by hydrolyzing acyl-CoA thioesters
+ to free fatty acids and CoA-SH. Eukaryotic members of this
+ family are expressed in brain, testis; Region: BFIT_BACH;
+ cd03442"
+ /db_xref="CDD:239526"
+ gene complement(1184102..1184641)
+ /locus_tag="SARI_01219"
+ CDS complement(1184102..1184641)
+ /locus_tag="SARI_01219"
+ /inference="protein motif:HMMPfam:IPR006008"
+ /inference="protein motif:HMMTigr:IPR006008"
+ /inference="similar to AA sequence:REFSEQ:YP_150415.1"
+ /note="Involved in cell division; probably involved in
+ intracellular septation"
+ /codon_start=1
+ /transl_table=11
+ /product="intracellular septation protein A"
+ /protein_id="YP_001570263.1"
+ /db_xref="GI:161503151"
+ /db_xref="InterPro:IPR006008"
+ /translation="MKQFLDFLPLVVFFAFYKLYDIYAATSALIVATAIVLIYSWVRY
+ RKIEKMALITFVLVAVFGGLTLFFHNDEFIKWKVTVIYALFAGALLMSQWVMKKPLIQ
+ RMLGKELALPQQIWSKLNLAWALFFIVCGLANIYIAFWLPQNIWVNFKVFGLTALTLI
+ FTLLSGVYIYRHLPQEDKS"
+ misc_feature complement(1184105..1184641)
+ /locus_tag="SARI_01219"
+ /note="intracellular septation protein A; Reviewed;
+ Region: PRK00259"
+ /db_xref="CDD:234704"
+ gene complement(1184698..1185441)
+ /locus_tag="SARI_01220"
+ CDS complement(1184698..1185441)
+ /locus_tag="SARI_01220"
+ /inference="protein motif:HMMPfam:IPR009627"
+ /inference="similar to AA sequence:INSD:AAV77104.1"
+ /note="'COG: NOG06197 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570264.1"
+ /db_xref="GI:161503152"
+ /db_xref="InterPro:IPR009627"
+ /translation="MSITAKSVYRDAGNFFRNQFITILLVSLLCAFITVILGHAFSPS
+ DAQIAQLSEGEHLAGSAGLFELVQNMSPEQQQILLRASAASTFSGLIGNAILAGGIIL
+ MIQLVSAGHRVSALRAIGASAPALPKLFILIFLTTLLVQIGIMLIVVPGIIMSIVLAL
+ APVMLVEEKMGVFTAMRSSMRLAWANMRLVAPAVIGWLLAKTLLLLFAPSLAVLTPNV
+ GAVLANTLSNLISAVLLIYLFRLYMLIRQ"
+ misc_feature complement(1184701..1185432)
+ /locus_tag="SARI_01220"
+ /note="hypothetical protein; Provisional; Region:
+ PRK02868"
+ /db_xref="CDD:235080"
+ gene complement(1185467..1185871)
+ /locus_tag="SARI_01221"
+ CDS complement(1185467..1185871)
+ /locus_tag="SARI_01221"
+ /inference="protein motif:HMMPfam:IPR005358"
+ /inference="similar to AA sequence:INSD:CAD08399.1"
+ /note="'COG: COG0727 Predicted Fe-S-cluster
+ oxidoreductase;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570265.1"
+ /db_xref="GI:161503153"
+ /db_xref="InterPro:IPR005358"
+ /translation="MSVLNPCMTCGACCAYFRVSFYWAEGDDASGRVPASLTESITPF
+ LRCMAGTNQKQPHCKALIGVPGENVSCAIYENRPSTCREFSMSGEGGEVNEACNRARA
+ RYGLPPLYKDMLFHTTADAATVELSRVQLPAN"
+ misc_feature complement(1185491..1185871)
+ /locus_tag="SARI_01221"
+ /note="Predicted Fe-S-cluster oxidoreductase [General
+ function prediction only]; Region: COG0727"
+ /db_xref="CDD:223799"
+ gene 1186209..1186847
+ /locus_tag="SARI_01222"
+ CDS 1186209..1186847
+ /locus_tag="SARI_01222"
+ /inference="protein motif:HMMPfam:IPR005618"
+ /inference="similar to AA sequence:INSD:CAD08400.1"
+ /note="receptor for colicin S4"
+ /codon_start=1
+ /transl_table=11
+ /product="outer membrane protein W"
+ /protein_id="YP_001570266.1"
+ /db_xref="GI:161503154"
+ /db_xref="InterPro:IPR005618"
+ /translation="MKKFTVVALALTTLLSSSVYAHEAGEFFMRAGPATVRPTEGAGG
+ TLGHLNGFDVSNNTQLGLTFTYMATDNLGVELLAATPFRHKVGTGATGDIATVHLLPP
+ TLMAQWYFGDSSSKVRPYVGIGVNYTTFFDNDFNDNGKKTGLSDLSFKDSWGAAGQVG
+ VDYLINRDWLIGASVWYMDIDTTANYKMGGVQQHDSVRLDPWVFMFSAGYRF"
+ misc_feature 1186209..1186844
+ /locus_tag="SARI_01222"
+ /note="outer membrane protein W; Provisional; Region:
+ PRK10959"
+ /db_xref="CDD:182867"
+ gene complement(1186929..1187807)
+ /locus_tag="SARI_01223"
+ CDS complement(1186929..1187807)
+ /locus_tag="SARI_01223"
+ /inference="protein motif:Gene3D:IPR012347"
+ /inference="protein motif:HMMPfam:IPR007760"
+ /inference="protein motif:superfamily:IPR009078"
+ /inference="similar to AA sequence:REFSEQ:YP_216714.1"
+ /note="'KEGG: mfa:Mfla_1436 3.4e-108 catalase K00429;
+ COG: COG3546 Mn-containing catalase;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570267.1"
+ /db_xref="GI:161503155"
+ /db_xref="InterPro:IPR007760"
+ /db_xref="InterPro:IPR009078"
+ /db_xref="InterPro:IPR012347"
+ /translation="MFRHVKQLQYTVRVSEPNPGLANLLLEQFGGPQGELAAACRYFT
+ QGLSDDDAGRREMLMDIATEELSHLEIIGSLVGMLNKGAKGELAEGTESEAELYRSLT
+ QNGNDSHITSLLYGGGPALTNSGGVPWTAAYIDTIGEVTADLRSNIAAEARAKIIYER
+ LINLTDDPGVKDTLSFLMTREVAHQLSFEKALYSIRNNFPPGKLPPVEQYTDVYYNMS
+ QGDDPRGSWNSDENFNYIAEPMPAVDGGDGLATVKLPREQLALLKAMAERTKSDLTVD
+ PLTGAELGCGEPKEDK"
+ misc_feature complement(1187220..1187807)
+ /locus_tag="SARI_01223"
+ /note="Manganese catalase, ferritin-like diiron-binding
+ domain; Region: Mn_catalase; cd01051"
+ /db_xref="CDD:153110"
+ misc_feature complement(order(1187256..1187258,1187355..1187357,
+ 1187604..1187606,1187613..1187615,1187703..1187705))
+ /locus_tag="SARI_01223"
+ /note="dimanganese center [ion binding]; other site"
+ /db_xref="CDD:153110"
+ gene complement(1187827..1188333)
+ /locus_tag="SARI_01224"
+ CDS complement(1187827..1188333)
+ /locus_tag="SARI_01224"
+ /inference="protein motif:Gene3D:IPR012347"
+ /inference="protein motif:HMMPfam:IPR010287"
+ /inference="protein motif:superfamily:IPR009078"
+ /inference="similar to AA sequence:INSD:AAL20648.1"
+ /note="'KEGG: rpe:RPE_3645 0.00022 catalase K00429;
+ COG: COG3685 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570268.1"
+ /db_xref="GI:161503156"
+ /db_xref="InterPro:IPR009078"
+ /db_xref="InterPro:IPR010287"
+ /db_xref="InterPro:IPR012347"
+ /translation="MNYTEHYHDWLRDAHAMEKQAESMLESMASRIENYPDIKARIEQ
+ HISETKHQITMLEEVLDRNGISRSVLKDSMSKMAAMGQSIGGMFPSDEIVKGSISGYV
+ FEQFEIACYTSLLAAAKKAGDTASIPTIEAILKEEMQMADWLIKHIPQTTEQFLLRSE
+ ADGVEAKK"
+ misc_feature complement(1187890..1188309)
+ /locus_tag="SARI_01224"
+ /note="Ferritin-like superfamily of diiron-containing
+ four-helix-bundle proteins; Region: Ferritin_like;
+ cd00657"
+ /db_xref="CDD:153097"
+ misc_feature complement(order(1187914..1187916,1187923..1187925,
+ 1188022..1188024,1188178..1188180,1188187..1188189,
+ 1188280..1188282))
+ /locus_tag="SARI_01224"
+ /note="dinuclear metal binding motif [ion binding]; other
+ site"
+ /db_xref="CDD:153097"
+ gene complement(1188407..1188967)
+ /locus_tag="SARI_01225"
+ CDS complement(1188407..1188967)
+ /locus_tag="SARI_01225"
+ /inference="protein motif:HMMPfam:IPR010287"
+ /inference="protein motif:HMMPIR:IPR012403"
+ /inference="protein motif:superfamily:IPR009078"
+ /inference="similar to AA sequence:REFSEQ:YP_150421.1"
+ /note="'KEGG: rpe:RPE_3645 2.8e-23 catalase K00429;
+ COG: COG3685 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570269.1"
+ /db_xref="GI:161503157"
+ /db_xref="InterPro:IPR009078"
+ /db_xref="InterPro:IPR010287"
+ /db_xref="InterPro:IPR012403"
+ /translation="MKQSASPLARSILPRRIRFMNIKTVEDLFIHLLSDTYSAEKQLT
+ KALSKLARATSNEKLSQAFQSHLEETQGQIERIDQIVESESDIKLKRMKCVAMEGLIE
+ EANEVIESTEKNEVRDAALIAAAQKVEHYEIASYGTLATLAEQLGYSKALKLLKETLD
+ EEKQTDLKLTDLAVSNVNKSAERKSK"
+ misc_feature complement(1188449..1188892)
+ /locus_tag="SARI_01225"
+ /note="YciF bacterial stress response protein,
+ ferritin-like iron-binding domain; Region: YciF; cd07909"
+ /db_xref="CDD:153118"
+ misc_feature complement(order(1188554..1188556,1188563..1188565,
+ 1188575..1188577,1188590..1188592,1188596..1188601,
+ 1188644..1188646,1188659..1188661,1188671..1188673,
+ 1188680..1188688,1188863..1188865,1188875..1188877))
+ /locus_tag="SARI_01225"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:153118"
+ misc_feature complement(order(1188482..1188484,1188560..1188562,
+ 1188572..1188574,1188581..1188583,1188749..1188751,
+ 1188758..1188760,1188770..1188772,1188848..1188850))
+ /locus_tag="SARI_01225"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:153118"
+ gene complement(1188989..1189168)
+ /locus_tag="SARI_01226"
+ CDS complement(1188989..1189168)
+ /locus_tag="SARI_01226"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570270.1"
+ /db_xref="GI:161503158"
+ /translation="MVVQEISPRIVKKHLKQAVKAVNIAVEISKTIRNELLKPVKKVA
+ RIVTADVNPIIPDLL"
+ gene complement(1188999..1189238)
+ /locus_tag="SARI_01227"
+ CDS complement(1188999..1189238)
+ /locus_tag="SARI_01227"
+ /inference="similar to AA sequence:REFSEQ:NP_455770.1"
+ /note="'COG: COG3729 General stress protein;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570271.1"
+ /db_xref="GI:161503159"
+ /translation="MSTRLKTEFFSNQRDRRNNMAEHRGGSGNFAENREKASEAGRKG
+ GQHSGGNFKNDPQRASEAGKKGGQNSHGGRKSDNS"
+ misc_feature complement(1189002..1189205)
+ /locus_tag="SARI_01227"
+ /note="General stress protein [General function prediction
+ only]; Region: GsiB; COG3729"
+ /db_xref="CDD:226252"
+ gene complement(1189664..1190473)
+ /gene="trpA"
+ /locus_tag="SARI_01228"
+ CDS complement(1189664..1190473)
+ /gene="trpA"
+ /locus_tag="SARI_01228"
+ /inference="protein motif:BlastProDom:IPR002028"
+ /inference="protein motif:HMMPfam:IPR002028"
+ /inference="protein motif:HMMTigr:IPR002028"
+ /inference="protein motif:ScanRegExp:IPR002028"
+ /inference="protein motif:superfamily:IPR011060"
+ /inference="similar to AA sequence:INSD:CAD08405.1"
+ /note="catalyzes the formation of indole and
+ glyceraldehyde 3-phosphate from indoleglycerol phosphate
+ in tryptophan biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="tryptophan synthase subunit alpha"
+ /protein_id="YP_001570272.1"
+ /db_xref="GI:161503160"
+ /db_xref="InterPro:IPR002028"
+ /db_xref="InterPro:IPR011060"
+ /translation="MERYENLFAQLNVRREGAFVPFVTLGDPGIEQSLKIIDTLIDAG
+ ADALELGVPFSDPLADGPTIQNANLRAFAAGVTPTQCFEMLALIREKHPTIPIGLLMY
+ ANLVFNNGIDAFYAHCEKVGVDSVLVADVPVEESAPFRQAALRHNIAPIFICPPNADD
+ DLLRQIASYGRGYTYLLSRSGVTGAENRGALPLHHLIEKLKEYHAAPALQGFGISSPV
+ QVSAAVRAGAAGAISGSAIVNIIEKNHNTSPDQMLAELKSFVYAMKAASRV"
+ misc_feature complement(1189676..1190473)
+ /gene="trpA"
+ /locus_tag="SARI_01228"
+ /note="tryptophan synthase alpha subunit; Provisional;
+ Region: trpA; CHL00200"
+ /db_xref="CDD:214394"
+ misc_feature complement(1189682..1190422)
+ /gene="trpA"
+ /locus_tag="SARI_01228"
+ /note="Ttryptophan synthase (TRPS) alpha subunit (TSA).
+ TPRS is a bifunctional tetrameric enzyme (2 alpha and 2
+ beta subunits) that catalyzes the last two steps of
+ L-tryptophan biosynthesis. Alpha and beta subunit catalyze
+ two distinct reactions which are both...; Region:
+ Tryptophan_synthase_alpha; cd04724"
+ /db_xref="CDD:240075"
+ misc_feature complement(order(1189769..1189774,1189835..1189840,
+ 1189922..1189927,1189949..1189951,1190282..1190284,
+ 1190294..1190296,1190327..1190329))
+ /gene="trpA"
+ /locus_tag="SARI_01228"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:240075"
+ misc_feature complement(order(1189925..1189927,1190168..1190170,
+ 1190294..1190296,1190327..1190329))
+ /gene="trpA"
+ /locus_tag="SARI_01228"
+ /note="active site"
+ /db_xref="CDD:240075"
+ misc_feature complement(order(1190168..1190170,1190294..1190296,
+ 1190327..1190329))
+ /gene="trpA"
+ /locus_tag="SARI_01228"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:240075"
+ misc_feature complement(order(1189988..1189990,1189997..1190005,
+ 1190009..1190011,1190069..1190071,1190078..1190080,
+ 1190084..1190089,1190153..1190155,1190162..1190164,
+ 1190276..1190281,1190288..1190290,1190297..1190299,
+ 1190303..1190314))
+ /gene="trpA"
+ /locus_tag="SARI_01228"
+ /note="heterodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:240075"
+ gene complement(1190473..1191666)
+ /locus_tag="SARI_01229"
+ CDS complement(1190473..1191666)
+ /locus_tag="SARI_01229"
+ /inference="protein motif:HMMPfam:IPR001926"
+ /inference="protein motif:HMMTigr:IPR006654"
+ /inference="protein motif:ScanRegExp:IPR006653"
+ /inference="similar to AA sequence:INSD:AAO69265.1"
+ /note="catalyzes the formation of L-tryptophan from
+ L-serine and 1-(indol-3-yl)glycerol 3-phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="tryptophan synthase subunit beta"
+ /protein_id="YP_001570273.1"
+ /db_xref="GI:161503161"
+ /db_xref="InterPro:IPR001926"
+ /db_xref="InterPro:IPR006653"
+ /db_xref="InterPro:IPR006654"
+ /translation="MTTLLNPYFGEFGGMYVPQILMPALRQLEEAFVSAQKDPEFQAQ
+ FADLLKNYAGRPTALTKCQNITAGTRTTLYLKREDLLHGGAHKTNQVLGQALLAKRMG
+ KSEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAQVIPVH
+ SGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKSQILD
+ KEGRLPDAVIACVGGGSNAIGMFADFINDASVGLIGVEPGGHGIETGEHGAPLKHGRV
+ GIYFGMKAPMMQTADGQIEESYSISAGLDFPSVGPQHAHLNSIGRADYVSITDDEALE
+ AFKTLCRHEGIIPALESSHALAHALKMMREHPEKEQLLVVNLSGRGDKDIFTVHDILK
+ ARGEI"
+ misc_feature complement(1190494..1191645)
+ /locus_tag="SARI_01229"
+ /note="tryptophan synthase, beta subunit; Region: trpB;
+ TIGR00263"
+ /db_xref="CDD:232897"
+ misc_feature complement(1190506..1191600)
+ /locus_tag="SARI_01229"
+ /note="Tryptophan synthase-beta: Trptophan synthase is a
+ bifunctional enzyme that catalyses the last two steps in
+ the biosynthesis of L-tryptophan via its alpha and beta
+ reactions. In the alpha reaction, indole 3-glycerol
+ phosphate is cleaved reversibly to...; Region:
+ Trp-synth_B; cd06446"
+ /db_xref="CDD:107207"
+ misc_feature complement(order(1190536..1190538,1190617..1190619,
+ 1190959..1190973,1191097..1191099,1191325..1191327,
+ 1191406..1191411))
+ /locus_tag="SARI_01229"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:107207"
+ misc_feature complement(1191406..1191408)
+ /locus_tag="SARI_01229"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:107207"
+ gene complement(1191676..1193034)
+ /locus_tag="SARI_01230"
+ CDS complement(1191676..1193034)
+ /locus_tag="SARI_01230"
+ /inference="protein motif:BlastProDom:IPR001468"
+ /inference="protein motif:HMMPfam:IPR001240"
+ /inference="protein motif:HMMPfam:IPR013798"
+ /inference="protein motif:ScanRegExp:IPR001468"
+ /inference="protein motif:superfamily:IPR011060"
+ /inference="similar to AA sequence:INSD:AAA27237.1"
+ /note="monomeric bifunctional protein; functions in
+ tryptophan biosynthesis pathway;
+ phosphoribosylanthranilate is rearranged to
+ carboxyphenylaminodeoxyribulosephosphate which is then
+ closed to form indole-3-glycerol phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="bifunctional indole-3-glycerol phosphate
+ synthase/phosphoribosylanthranilate isomerase"
+ /protein_id="YP_001570274.1"
+ /db_xref="GI:161503162"
+ /db_xref="InterPro:IPR001240"
+ /db_xref="InterPro:IPR001468"
+ /db_xref="InterPro:IPR011060"
+ /db_xref="InterPro:IPR013798"
+ /translation="MQTVLAKIVADKAIWVEARKQQQPLASFQNEIQPSTRHFYDALQ
+ GARTAFILECKKASPSKGVIRDDFDPARIAGIYQHYASAISVLTDEKYFQGSFDFLPV
+ VSQSAPQPILCKDFIIDPYQIYLARYYQADACLLMLSVLDDEQYRQLAAVAHSLKMGV
+ LTEVSNDAERERAMALGAKVVGINNRDLRDLSIDLNRTRQLAPKLGHGVTVISESGIN
+ TYGQVRELSHFANGFLIGSALMAHDDLNAAVRRVLLGENKICGLTRAQDAKAAYDAGA
+ VYGGLIFAPASPRVVNIDQAREIIAAAPLQYVGVFQDADIADVCQKAAVLSLSAIQLH
+ GSENQAYVNALREALPRDLQIWKALSVGDTLPARDYHHVDKYIFDNGQGGSGQRFDWS
+ LLQGQPLDNVLLAGGLAADNCVQAAQAGCAGLDFNSGVEAQPGIKDARLLASVFQTLR
+ AY"
+ misc_feature complement(1191679..1193034)
+ /locus_tag="SARI_01230"
+ /note="bifunctional indole-3-glycerol phosphate
+ synthase/phosphoribosylanthranilate isomerase;
+ Provisional; Region: PRK09427"
+ /db_xref="CDD:236509"
+ misc_feature complement(1192279..1192920)
+ /locus_tag="SARI_01230"
+ /note="Indole-3-glycerol phosphate synthase (IGPS); an
+ enzyme in the tryptophan biosynthetic pathway, catalyzing
+ the ring closure reaction of
+ 1-(o-carboxyphenylamino)-1-deoxyribulose-5-phosphate
+ (CdRP) to indole-3-glycerol phosphate (IGP), accompanied
+ by the...; Region: IGPS; cd00331"
+ /db_xref="CDD:238203"
+ misc_feature complement(order(1192324..1192329,1192387..1192392,
+ 1192471..1192473,1192477..1192479,1192483..1192485,
+ 1192546..1192548,1192624..1192626,1192687..1192689,
+ 1192693..1192695,1192756..1192758,1192855..1192863,
+ 1192870..1192872,1192876..1192878))
+ /locus_tag="SARI_01230"
+ /note="active site"
+ /db_xref="CDD:238203"
+ misc_feature complement(order(1192483..1192485,1192546..1192548,
+ 1192693..1192695,1192870..1192872,1192876..1192878))
+ /locus_tag="SARI_01230"
+ /note="ribulose/triose binding site [chemical binding];
+ other site"
+ /db_xref="CDD:238203"
+ misc_feature complement(order(1192324..1192329,1192387..1192389,
+ 1192870..1192872))
+ /locus_tag="SARI_01230"
+ /note="phosphate binding site [ion binding]; other site"
+ /db_xref="CDD:238203"
+ misc_feature complement(order(1192471..1192473,1192477..1192479,
+ 1192756..1192758,1192858..1192860))
+ /locus_tag="SARI_01230"
+ /note="substrate (anthranilate) binding pocket [chemical
+ binding]; other site"
+ /db_xref="CDD:238203"
+ misc_feature complement(order(1192471..1192473,1192624..1192626,
+ 1192687..1192689,1192693..1192695,1192756..1192758))
+ /locus_tag="SARI_01230"
+ /note="product (indole) binding pocket [chemical binding];
+ other site"
+ /db_xref="CDD:238203"
+ misc_feature complement(1191694..1192266)
+ /locus_tag="SARI_01230"
+ /note="Phosphoribosylanthranilate isomerase (PRAI)
+ catalyzes the fourth step of the tryptophan biosynthesis,
+ the conversion of N-(5'- phosphoribosyl)-anthranilate
+ (PRA) to 1-(o-carboxyphenylamino)- 1-deoxyribulose
+ 5-phosphate (CdRP). Most PRAIs are...; Region: PRAI;
+ cd00405"
+ /db_xref="CDD:238237"
+ misc_feature complement(order(1191751..1191756,1191760..1191762,
+ 1191898..1191900,1192033..1192035,1192039..1192041,
+ 1192189..1192191,1192255..1192257,1192261..1192263))
+ /locus_tag="SARI_01230"
+ /note="active site"
+ /db_xref="CDD:238237"
+ gene complement(1193038..1194633)
+ /locus_tag="SARI_01231"
+ CDS complement(1193038..1194633)
+ /locus_tag="SARI_01231"
+ /inference="protein motif:BlastProDom:IPR000312"
+ /inference="protein motif:Gene3D:IPR000312"
+ /inference="protein motif:HMMPfam:IPR000312"
+ /inference="protein motif:HMMPfam:IPR000991"
+ /inference="protein motif:HMMTigr:IPR005940"
+ /inference="protein motif:HMMTigr:IPR006221"
+ /inference="protein motif:ScanRegExp:IPR012998"
+ /inference="similar to AA sequence:INSD:CAD08408.1"
+ /note="bifunctional anthranilate synthase II/anthranilate
+ phosphoribosyltransferase; TrpD; forms a heterotetramer
+ with Trp E and the complex catalyzes the formation of
+ anthranilate from chorismate and glutamine; also catalyzes
+ the formation of N-(5-phospho-D-ribosyl)-anthranilate from
+ athranilate and 5-phospho-alpha-D-ribose 1-diphosphate;
+ functions in tryptophan biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="bifunctional glutamine
+ amidotransferase/anthranilate phosphoribosyltransferase"
+ /protein_id="YP_001570275.1"
+ /db_xref="GI:161503163"
+ /db_xref="InterPro:IPR000312"
+ /db_xref="InterPro:IPR000991"
+ /db_xref="InterPro:IPR005940"
+ /db_xref="InterPro:IPR006221"
+ /db_xref="InterPro:IPR012998"
+ /translation="MADILLLDNIDSFTWNLADQLRSNGHNVVIYRNHIPAQTLIGRL
+ ATMKNPVLMLSPGPGVPSEAGCMPELLTRLRGKLPIIGICLGHQAIVEAYGGYVGQAG
+ EILHGKASSIEHDGQAMFAGLANPLPVARYHSLVGSNIPAGLTINAHFNGMVMAVRHD
+ ADRVCGFQFHPESILTTQGARLLEQTLAWAQQKLEPTNTLQPILEKLYQAQTLTQQES
+ HQLFSAVVRGELKPEQLAAALVSMKIRGEHPNEIAGAATALLENAAPFPRPDYLFADI
+ VGTGGDGSNSINISTASAFVAAACGLKVAKHGNRSVSSKSGSSDLLAAFGINLDMNAD
+ KSRQALDELGVCFLFAPKYHTGFRHAMPVRQQLKTRTLFNVLGPLINPAHPPLALIGV
+ YSPELVLPIAETLRVLGYQRAAVVHSGGMDEVSLHAPTIVAELHDGEIKSYQLTAEDF
+ GLTPYHQDQLVGGTPEENRDILTRLLQGKGDAAHEAAVAANVAMLMRLHGQEDLKANA
+ QTVLDVLRNGTAYDRVTALAARG"
+ misc_feature complement(1193041..1194633)
+ /locus_tag="SARI_01231"
+ /note="bifunctional glutamine
+ amidotransferase/anthranilate phosphoribosyltransferase;
+ Provisional; Region: PRK09522"
+ /db_xref="CDD:181927"
+ misc_feature complement(1194073..1194624)
+ /locus_tag="SARI_01231"
+ /note="Type 1 glutamine amidotransferase (GATase1) domain
+ found in Anthranilate synthase; Region:
+ GATase1_Anthranilate_Synthase; cd01743"
+ /db_xref="CDD:153214"
+ misc_feature complement(order(1194229..1194240,1194370..1194372,
+ 1194379..1194384,1194457..1194459,1194463..1194468))
+ /locus_tag="SARI_01231"
+ /note="glutamine binding [chemical binding]; other site"
+ /db_xref="CDD:153214"
+ misc_feature complement(order(1194118..1194120,1194124..1194126,
+ 1194382..1194384))
+ /locus_tag="SARI_01231"
+ /note="catalytic triad [active]"
+ /db_xref="CDD:153214"
+ misc_feature complement(1193878..1194039)
+ /locus_tag="SARI_01231"
+ /note="Glycosyl transferase family, helical bundle domain;
+ Region: Glycos_trans_3N; pfam02885"
+ /db_xref="CDD:145834"
+ misc_feature complement(1193071..1193826)
+ /locus_tag="SARI_01231"
+ /note="Glycosyl transferase family, a/b domain; Region:
+ Glycos_transf_3; pfam00591"
+ /db_xref="CDD:216013"
+ gene complement(1194633..1196195)
+ /locus_tag="SARI_01232"
+ CDS complement(1194633..1196195)
+ /locus_tag="SARI_01232"
+ /inference="protein motif:BlastProDom:IPR005801"
+ /inference="protein motif:FPrintScan:IPR005801"
+ /inference="protein motif:HMMPfam:IPR005801"
+ /inference="protein motif:HMMPfam:IPR006805"
+ /inference="protein motif:HMMTigr:IPR005257"
+ /inference="similar to AA sequence:REFSEQ:NP_460682.1"
+ /note="'with component II, the glutamine amidotransferase,
+ catalyzes the formation of anthranilate from chorismate
+ and glutamine'"
+ /codon_start=1
+ /transl_table=11
+ /product="anthranilate synthase component I"
+ /protein_id="YP_001570276.1"
+ /db_xref="GI:161503164"
+ /db_xref="InterPro:IPR005257"
+ /db_xref="InterPro:IPR005801"
+ /db_xref="InterPro:IPR006805"
+ /translation="MQTQKPTLELLTCDAAYRENPTALFHQVCGDRPATLLLESADID
+ SKDDLKSLLLVDSALRIIAFGDTVTIEALSDNGASLLPLLDIALPAGVENACLPAGRV
+ LRFPPVSPLLDEDARLCSLSVFDAFRLLQEVVNVPTQAREAMFFGGLFAYDLVAGFEA
+ LPHLEADNNCPDYCFYLAETMMVIDHRKKSTRIQASLFTANDEEKQRLNARLAHLRQQ
+ LTQPAPPLPVTPVPDMRCECNQSDEAFGAVVRQLQKAIRAGEIFQVVPSRRFSLPCPS
+ PLAAYYVLKKSNPSPYMFFMQDNDFTLFGASPESSLKYDAASRQIELYPIAGTRPRGR
+ HADGTLDRDLDSRIELDMRTDHKELSEHLMLVDLARNDLARICTPGSRYVADLTKVDR
+ YSHVMHLVSRVVGELRHDLDALHAYRACMNMGTLSGAPKVRAMQLIADVEGQRRGSYG
+ GAVGYFTAHGDLDTCIVIRSALVENGIATVQAGAGIVLDSVPQSEADETRNKARAVLR
+ AIATAHHAQETF"
+ misc_feature complement(1194636..1196195)
+ /locus_tag="SARI_01232"
+ /note="anthranilate synthase component I; Provisional;
+ Region: PRK13564"
+ /db_xref="CDD:237428"
+ misc_feature complement(1195617..>1195859)
+ /locus_tag="SARI_01232"
+ /note="Anthranilate synthase component I, N terminal
+ region; Region: Anth_synt_I_N; pfam04715"
+ /db_xref="CDD:218224"
+ misc_feature complement(1194690..1195475)
+ /locus_tag="SARI_01232"
+ /note="chorismate binding enzyme; Region: Chorismate_bind;
+ pfam00425"
+ /db_xref="CDD:215913"
+ misc_feature complement(1196218..1196312)
+ /inference="nucleotide motif:Rfam:RF00513"
+ /note="tryptophan operon leader"
+ gene 1196457..1197338
+ /locus_tag="SARI_01233"
+ CDS 1196457..1197338
+ /locus_tag="SARI_01233"
+ /inference="protein motif:HMMPfam:IPR004013"
+ /inference="protein motif:HMMSmart:IPR003141"
+ /inference="similar to AA sequence:SwissProt:O54453"
+ /note="'KEGG: reh:H16_A1200 1.8e-47 predicted
+ metal-dependent phosphoesterase (PHP family);
+ COG: COG0613 Predicted metal-dependent phosphoesterases
+ (PHP family);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570277.1"
+ /db_xref="GI:161503165"
+ /db_xref="InterPro:IPR003141"
+ /db_xref="InterPro:IPR004013"
+ /translation="MGAALSDTNYAVIYDLHSHTTASDGLLTPETLVHRAVEMRVGTL
+ GITDHDTTAAIPAAREEISRSGLALNLIPGVEISTVWENHEIHIVGLNIDIAHPAMCH
+ FLAQQTQRRQARGRLIAERLEKAHIPGAWEGALRLANGGAVTRGHFARFLVECGKAAT
+ MADVFKKYLARGKTGYVPPQWCTIEQAIDVIHHSGGKAVLAHPGRYDLSAKWLKRLVA
+ HFASHHGDAMEVAQCQQSPNERTQLATLARQHHLWASLGSDFHQPCPWIELGRKLWLP
+ AGVEGVWQTWEQPQISQ"
+ misc_feature 1196487..1197260
+ /locus_tag="SARI_01233"
+ /note="Predicted metal-dependent phosphoesterases (PHP
+ family) [General function prediction only]; Region:
+ COG0613"
+ /db_xref="CDD:223686"
+ misc_feature 1196496..>1196726
+ /locus_tag="SARI_01233"
+ /note="Polymerase and Histidinol Phosphatase domain of
+ Histidinol phosphate phosphatase (HisPPase) AMP bound;
+ Region: PHP_HisPPase_AMP; cd07438"
+ /db_xref="CDD:213993"
+ misc_feature order(1196505..1196507,1196511..1196513,1196526..1196528,
+ 1196601..1196603,1196682..1196684,1196715..1196717)
+ /locus_tag="SARI_01233"
+ /note="active site"
+ /db_xref="CDD:213993"
+ misc_feature <1197000..1197239
+ /locus_tag="SARI_01233"
+ /note="Polymerase and Histidinol Phosphatase domain of
+ Histidinol phosphate phosphatase (HisPPase) AMP bound;
+ Region: PHP_HisPPase_AMP; cd07438"
+ /db_xref="CDD:213993"
+ gene 1197346..1197966
+ /locus_tag="SARI_01234"
+ CDS 1197346..1197966
+ /locus_tag="SARI_01234"
+ /inference="protein motif:HMMPfam:IPR006070"
+ /inference="protein motif:HMMPIR:IPR012200"
+ /inference="protein motif:HMMTigr:IPR004388"
+ /inference="similar to AA sequence:REFSEQ:NP_805411.1"
+ /note="'COG: COG0009 Putative translation factor (SUA5);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570278.1"
+ /db_xref="GI:161503166"
+ /db_xref="InterPro:IPR004388"
+ /db_xref="InterPro:IPR006070"
+ /db_xref="InterPro:IPR012200"
+ /translation="MSQFFYIHPDNPQQRLINQAVDIVRKGGVIVYPTDSGYALGCKI
+ EDKGAMERICRIRQLPDGHNFTLMCRDLSELSTYSFVDNVAFRLIKNNTPGNYTFILK
+ GTKELPRRLLQEKRKTIGLRVPSNPIALALLDTLSEPMLSTSLMLPGSDFTESDPEEI
+ KERLEKQVDLIIHGGYLGQQPTTVIDLTDDSPVVLRVGVGDVTPFL"
+ misc_feature 1197346..1197963
+ /locus_tag="SARI_01234"
+ /note="hypothetical protein; Provisional; Region:
+ PRK11630"
+ /db_xref="CDD:183245"
+ gene complement(1198025..1198618)
+ /locus_tag="SARI_01235"
+ CDS complement(1198025..1198618)
+ /locus_tag="SARI_01235"
+ /inference="protein motif:HMMPfam:IPR001584"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:REFSEQ:YP_402839.1"
+ /note="'KEGG: nwi:Nwi_0782 0.0070 integrase, catalytic
+ region K00986;
+ COG: COG2801 Transposase and inactivated derivatives;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570279.1"
+ /db_xref="GI:161503167"
+ /db_xref="InterPro:IPR001584"
+ /db_xref="InterPro:IPR012337"
+ /translation="MKELGLVSCQQPAHRYKRGGHEHIAIPNHPERQFAVTETNQVWC
+ GNVTYIWTGKRWAYLAVVLDLFARKPVGRAMLFSLDSRLTIKALEMAWETRGKPAGVM
+ FHSVQGSHYTSRQFRQLLWRYRIRQSMSRRGNCRDNSPMERFFRSLKNAWVPVTGYIS
+ FSDAAHAITDYIVGYYSVLRPHEYNGGLPPNESENRY"
+ misc_feature complement(1198169..1198501)
+ /locus_tag="SARI_01235"
+ /note="Integrase core domain; Region: rve; pfam00665"
+ /db_xref="CDD:216050"
+ misc_feature complement(1198049..1198252)
+ /locus_tag="SARI_01235"
+ /note="Integrase core domain; Region: rve_3; pfam13683"
+ /db_xref="CDD:222316"
+ gene 1199211..1199438
+ /locus_tag="SARI_01237"
+ CDS 1199211..1199438
+ /locus_tag="SARI_01237"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570281.1"
+ /db_xref="GI:161503169"
+ /translation="MEEWAALNDLLEYSSGVYYRPRKRKVYTWDDSNLKKWQCLGFES
+ LNHYLTYNAMNNTMAGARGFDELFHILEIVT"
+ gene 1199443..1199664
+ /locus_tag="SARI_01238"
+ CDS 1199443..1199664
+ /locus_tag="SARI_01238"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570282.1"
+ /db_xref="GI:161503170"
+ /translation="MHTQTTQTKRFTQHVKCCEWYYDEIQNITNDAFLTDEEKLAVLD
+ DLENRILTLAAPFLAAANKIKTTMEQMKK"
+ gene complement(1199633..1199845)
+ /locus_tag="SARI_01240"
+ CDS complement(1199633..1199845)
+ /locus_tag="SARI_01240"
+ /inference="protein motif:HMMPfam:IPR001207"
+ /inference="similar to AA sequence:INSD:AAK69271.1"
+ /note="'COG: COG3328 Transposase and inactivated
+ derivatives;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570283.1"
+ /db_xref="GI:161503172"
+ /db_xref="InterPro:IPR001207"
+ /translation="MIYTTNAIESVHRQFRKLTKTKDAFPNENNLLKLLYLGLINALE
+ KWTMPLQNWNLTLSQLVIFSFAPLSS"
+ misc_feature complement(1199636..>1199845)
+ /locus_tag="SARI_01240"
+ /note="Transposase and inactivated derivatives [DNA
+ replication, recombination, and repair]; Region: COG3328"
+ /db_xref="CDD:225865"
+ gene 1199810..1200106
+ /locus_tag="SARI_01239"
+ CDS 1199810..1200106
+ /locus_tag="SARI_01239"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570284.1"
+ /db_xref="GI:161503171"
+ /translation="MHRFDGIGGVNHLADNSLFTGFMKGFADGGDNLMKNTKVITESA
+ GMPGEVLGDLAKQVTGFVGEIAGVVSGFNAKVSADAFTQSLTLAVNSGQSSTGG"
+ gene 1200314..1201189
+ /locus_tag="SARI_01241"
+ CDS 1200314..1201189
+ /locus_tag="SARI_01241"
+ /inference="protein motif:HMMPfam:IPR002942"
+ /inference="protein motif:HMMPfam:IPR006145"
+ /inference="protein motif:HMMSmart:IPR002942"
+ /inference="protein motif:HMMTigr:IPR000748"
+ /inference="protein motif:ScanRegExp:IPR000748"
+ /inference="similar to AA sequence:REFSEQ:NP_460678.1"
+ /note="catalyzes the synthesis of pseudouridine from
+ uracil-2605 in 23S ribosomal RNA"
+ /codon_start=1
+ /transl_table=11
+ /product="23S rRNA pseudouridylate synthase B"
+ /protein_id="YP_001570285.1"
+ /db_xref="GI:161503173"
+ /db_xref="InterPro:IPR000748"
+ /db_xref="InterPro:IPR002942"
+ /db_xref="InterPro:IPR006145"
+ /translation="MSEKLQKVLARAGHGSRREIESIIEAGRVSVDGKIATLGDRVEV
+ TPGLKIRIDGHLISVKESAEQICRVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGAR
+ WIAVGRLDVNTCGLLLFTTDGELANRLMHPSREVEREYAVRVFGQVDESKLRDLSRGV
+ QLEDGPAAFKTIKFSGGEGINQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDI
+ LLPKGLPRGGWAELDLAQTNYLRDLVELPPETSSKVAVEKDRRRMKANQIRRAVKRHS
+ QMAGGRRSGGRNNNG"
+ misc_feature 1200314..1201150
+ /locus_tag="SARI_01241"
+ /note="23S rRNA pseudouridylate synthase B; Provisional;
+ Region: PRK10700"
+ /db_xref="CDD:182659"
+ misc_feature 1200326..1200505
+ /locus_tag="SARI_01241"
+ /note="S4/Hsp/ tRNA synthetase RNA-binding domain; The
+ domain surface is populated by conserved, charged residues
+ that define a likely RNA-binding site; Found in stress
+ proteins, ribosomal proteins and tRNA synthetases; This
+ may imply a hitherto unrecognized...; Region: S4; cd00165"
+ /db_xref="CDD:238095"
+ misc_feature order(1200356..1200361,1200365..1200370,1200374..1200379,
+ 1200386..1200391,1200395..1200397,1200416..1200439,
+ 1200446..1200448)
+ /locus_tag="SARI_01241"
+ /note="RNA binding surface [nucleotide binding]; other
+ site"
+ /db_xref="CDD:238095"
+ misc_feature 1200515..1201012
+ /locus_tag="SARI_01241"
+ /note="Pseudouridine synthase, Escherichia coli RluB like;
+ Region: PseudoU_synth_RluB; cd02556"
+ /db_xref="CDD:211330"
+ misc_feature order(1200632..1200643,1200902..1200904)
+ /locus_tag="SARI_01241"
+ /note="probable active site [active]"
+ /db_xref="CDD:211330"
+ gene complement(1201284..1201874)
+ /locus_tag="SARI_01242"
+ CDS complement(1201284..1201874)
+ /locus_tag="SARI_01242"
+ /inference="protein motif:HMMPfam:IPR003724"
+ /inference="protein motif:HMMPIR:IPR003724"
+ /inference="protein motif:HMMTigr:IPR003724"
+ /inference="similar to AA sequence:INSD:AAV77119.1"
+ /note="'catalyzes the formation of adenosylcob(III)yrinic
+ acid a,c-diamide from cob(I)yrinic acid a,c-diamide'"
+ /codon_start=1
+ /transl_table=11
+ /product="cob(I)yrinic acid a,c-diamide
+ adenosyltransferase"
+ /protein_id="YP_001570286.1"
+ /db_xref="GI:161503174"
+ /db_xref="InterPro:IPR003724"
+ /translation="MSDERYQQRQQKVKDRVDARVAQAQEERGIIIVFTGNGKGKTTA
+ AFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPHGVEFQVMATGFTWETQNREADT
+ AACMAVWQHGKRMLADPQLDMVVLDELTYMVAYDYLPLEKVINALNGRPSHQTVIITG
+ RGCHRDILDLADTVSELRPVKHAFDAGVKAQMGIDY"
+ misc_feature complement(1201287..1201874)
+ /locus_tag="SARI_01242"
+ /note="ATP:corrinoid adenosyltransferase [Coenzyme
+ metabolism]; Region: BtuR; COG2109"
+ /db_xref="CDD:225020"
+ misc_feature complement(1201812..>1201868)
+ /locus_tag="SARI_01242"
+ /note="ATP:corrinoid adenosyltransferase BtuR/CobO/CobP;
+ Region: CobA_CobO_BtuR; cl17276"
+ /db_xref="CDD:247830"
+ misc_feature complement(1201323..1201796)
+ /locus_tag="SARI_01242"
+ /note="ATP:corrinoid adenosyltransferase BtuR/CobO/CobP.
+ This family consists of the BtuR, CobO, CobP proteins all
+ of which are Cob(I)alamin (vitamin B12)
+ adenosyltransferase, which is involved in cobalamin
+ (vitamin B12) biosynthesis. This enzyme is a homodimer;
+ Region: CobA_CobO_BtuR; cd00561"
+ /db_xref="CDD:238314"
+ misc_feature complement(order(1201326..1201328,1201332..1201337,
+ 1201341..1201364,1201368..1201373,1201410..1201412,
+ 1201647..1201652,1201656..1201661,1201665..1201667,
+ 1201710..1201727,1201731..1201736,1201746..1201748,
+ 1201758..1201760,1201791..1201793))
+ /locus_tag="SARI_01242"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238314"
+ misc_feature complement(1201749..1201769)
+ /locus_tag="SARI_01242"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:238314"
+ misc_feature complement(order(1201491..1201493,1201722..1201724,
+ 1201746..1201754,1201758..1201760))
+ /locus_tag="SARI_01242"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238314"
+ misc_feature complement(order(1201323..1201325,1201392..1201394,
+ 1201470..1201472,1201482..1201484,1201596..1201598,
+ 1201668..1201670,1201677..1201679))
+ /locus_tag="SARI_01242"
+ /note="hydroxycobalamin binding site [chemical binding];
+ other site"
+ /db_xref="CDD:238314"
+ misc_feature complement(1201494..1201508)
+ /locus_tag="SARI_01242"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:238314"
+ gene complement(1201871..1202632)
+ /locus_tag="SARI_01243"
+ CDS complement(1201871..1202632)
+ /locus_tag="SARI_01243"
+ /inference="protein motif:HMMPanther:IPR002347"
+ /inference="protein motif:HMMPfam:IPR002198"
+ /inference="protein motif:ScanRegExp:IPR002198"
+ /inference="similar to AA sequence:INSD:AAO69257.1"
+ /note="'KEGG: ecc:c1736 5.8e-120 yciK; short chain
+ dehydrogenase;
+ COG: COG1028 Dehydrogenases with different specificities
+ (related to short-chain alcohol dehydrogenases);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="short chain dehydrogenase"
+ /protein_id="YP_001570287.1"
+ /db_xref="GI:161503175"
+ /db_xref="InterPro:IPR002198"
+ /db_xref="InterPro:IPR002347"
+ /translation="MHYQPKQDLLQNRIILVTGASDGIGREAAITYARYGATVILLGR
+ NDEKLRRVAQHIADEQHVQPQWLTLDLLTCTAEECRQVADRIAVHFPRLDGVLHNAGL
+ LGEICPMSAQDPQIWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRA
+ NWGAYAVSKFATEGMMQVLADEYQNRSLRVNCINPGGTRTSMRASAFPTEDPQKLKTP
+ ADIMPLYLWLMGDDSRRKTGMTFDAQPGRKPGIAQ"
+ misc_feature complement(1201892..1202632)
+ /locus_tag="SARI_01243"
+ /note="putative oxoacyl-(acyl carrier protein) reductase;
+ Provisional; Region: PRK08945"
+ /db_xref="CDD:236357"
+ misc_feature complement(1201901..1202608)
+ /locus_tag="SARI_01243"
+ /note="Escherichia coli K-12 YCIK-like, classical (c)
+ SDRs; Region: Ycik_SDR_c; cd05340"
+ /db_xref="CDD:187599"
+ misc_feature complement(order(1202024..1202029,1202033..1202035,
+ 1202039..1202050,1202126..1202128,1202138..1202140,
+ 1202177..1202185,1202264..1202266,1202330..1202338,
+ 1202417..1202428,1202501..1202503,1202561..1202572,
+ 1202576..1202578))
+ /locus_tag="SARI_01243"
+ /note="NADP binding site [chemical binding]; other site"
+ /db_xref="CDD:187599"
+ misc_feature complement(order(1202084..1202092,1202096..1202104,
+ 1202108..1202116,1202120..1202125,1202132..1202137,
+ 1202144..1202146,1202150..1202164,1202225..1202227,
+ 1202234..1202236,1202243..1202248,1202255..1202260,
+ 1202267..1202272,1202279..1202284,1202291..1202293,
+ 1202297..1202311))
+ /locus_tag="SARI_01243"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:187599"
+ misc_feature complement(order(1202126..1202128,1202138..1202140,
+ 1202177..1202179,1202261..1202263))
+ /locus_tag="SARI_01243"
+ /note="active site"
+ /db_xref="CDD:187599"
+ gene 1202825..1203916
+ /locus_tag="SARI_01244"
+ CDS 1202825..1203916
+ /locus_tag="SARI_01244"
+ /inference="protein motif:BlastProDom:IPR002142"
+ /inference="protein motif:HMMPfam:IPR002142"
+ /inference="protein motif:HMMPfam:IPR013703"
+ /inference="similar to AA sequence:REFSEQ:YP_216700.1"
+ /note="SohB; periplasmic protein; member of the peptidase
+ S49 family"
+ /codon_start=1
+ /transl_table=11
+ /product="putative periplasmic protease"
+ /protein_id="YP_001570288.1"
+ /db_xref="GI:161503176"
+ /db_xref="InterPro:IPR002142"
+ /db_xref="InterPro:IPR013703"
+ /translation="MYTERKSRYLIKVGVVELLSEYGLFLAKIVTVVVAIAVIVLLIV
+ NATQRKRQRGELRVTNLSEQYQEMKDDLAAALMDGHQQKLWHKAQKKKHKQEAKAAKA
+ KAKQGDIATADKPRVWVIDFKGSMDAHEVNALREEVTAVLAVAKPGDRAVVRLESPGG
+ VVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVAEKIVAAPFAIVGSIGVV
+ AQIPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHHLFKDFV
+ QRMRPTLDIEQVATGEHWYGQQALKKGLVDEINTSDEVILGLMDGREVLNVRYMQRKK
+ LIERVTGSAAESADRLLLRWWQRGQKPLM"
+ misc_feature 1202873..1203340
+ /locus_tag="SARI_01244"
+ /note="Peptidase family S49 N-terminal; Region:
+ Peptidase_S49_N; pfam08496"
+ /db_xref="CDD:219868"
+ misc_feature 1202876..1203889
+ /locus_tag="SARI_01244"
+ /note="putative inner membrane peptidase; Provisional;
+ Region: PRK11778"
+ /db_xref="CDD:236978"
+ misc_feature 1203170..1203769
+ /locus_tag="SARI_01244"
+ /note="Signal peptide peptidase A (SppA), a serine
+ protease, has catalytic Ser-Lys dyad; Region:
+ S49_Sppa_N_C; cd07023"
+ /db_xref="CDD:132934"
+ misc_feature order(1203191..1203193,1203284..1203286,1203398..1203400,
+ 1203443..1203445,1203449..1203451,1203473..1203484,
+ 1203629..1203631,1203695..1203703,1203707..1203709,
+ 1203716..1203718)
+ /locus_tag="SARI_01244"
+ /note="tandem repeat interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:132934"
+ misc_feature order(1203218..1203220,1203239..1203241,1203320..1203322,
+ 1203518..1203520,1203524..1203538,1203623..1203625,
+ 1203635..1203637)
+ /locus_tag="SARI_01244"
+ /note="oligomer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:132934"
+ misc_feature 1203398..1203400
+ /locus_tag="SARI_01244"
+ /note="active site residues [active]"
+ /db_xref="CDD:132934"
+ gene complement(1204080..1204331)
+ /locus_tag="SARI_01245"
+ CDS complement(1204080..1204331)
+ /locus_tag="SARI_01245"
+ /inference="similar to AA sequence:REFSEQ:NP_455782.1"
+ /note="'COG: NOG13548 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570289.1"
+ /db_xref="GI:161503177"
+ /translation="MHKETQPIDRETLLLEANKIIREHEDTMAGIVATGVTQKNGVLV
+ FSGDYFLDEQGLPTPKSTAVFNMFKHLAHVLSEKYHLID"
+ misc_feature complement(1204083..1204331)
+ /locus_tag="SARI_01245"
+ /note="hypothetical protein; Provisional; Region:
+ PRK11037"
+ /db_xref="CDD:182919"
+ gene 1204734..1207331
+ /locus_tag="SARI_01246"
+ CDS 1204734..1207331
+ /locus_tag="SARI_01246"
+ /inference="protein motif:Gene3D:IPR013824"
+ /inference="protein motif:HMMPanther:IPR000380"
+ /inference="protein motif:HMMPfam:IPR006171"
+ /inference="protein motif:HMMPfam:IPR013263"
+ /inference="protein motif:HMMPfam:IPR013497"
+ /inference="protein motif:HMMPfam:IPR013498"
+ /inference="protein motif:HMMSmart:IPR003601"
+ /inference="protein motif:HMMSmart:IPR003602"
+ /inference="protein motif:HMMSmart:IPR006154"
+ /inference="protein motif:HMMTigr:IPR005733"
+ /inference="protein motif:ScanRegExp:IPR000380"
+ /note="'catalyzes the ATP-dependent breakage of
+ single-stranded DNA followed by passage and rejoining,
+ maintains net negative superhelicity'"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA topoisomerase I"
+ /protein_id="YP_001570290.1"
+ /db_xref="GI:161503178"
+ /db_xref="InterPro:IPR000380"
+ /db_xref="InterPro:IPR003601"
+ /db_xref="InterPro:IPR003602"
+ /db_xref="InterPro:IPR005733"
+ /db_xref="InterPro:IPR006154"
+ /db_xref="InterPro:IPR006171"
+ /db_xref="InterPro:IPR013263"
+ /db_xref="InterPro:IPR013497"
+ /db_xref="InterPro:IPR013498"
+ /db_xref="InterPro:IPR013824"
+ /translation="MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSAA
+ KKSADSTSTKTAKKPKKDERGALVNRMGVDPWHNWDAHYEVLPGKEKVVSELKQLAEK
+ ADHIYLATDLDREGEAIAWHLREVIGGDDARYSRVVFNEITKNAIRQAFEQPGELNIN
+ RVNAQQARRFMDRVVGYMVSPLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEE
+ FWEIDANTITPSGESLPLQVTHQNDKPFRPVNREQTLAAVSLLEKARYSVLEREDKPT
+ SSKPGAPFITSTLQQAASTRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNM
+ VRGYIGDNFGKKYLPDNPNQYASKENSQEAHEAIRPSDVSVMAESLKDMEADAQKLYQ
+ LIWRQFVACQMTPAQYDSTTLTVGAGEFRLKARGRILRFDGWTKVMPALRKGDEDRTL
+ PAVNKGDDLTLLELTPAQHFTKPPARFSEASLVKELEKRGIGRPSTYASIISTIQDRG
+ YVRVENRRFYAEKMGEIVTDRLEENFRELMNYDFTAQMEDSLDQVANHQAEWKAVLDN
+ FFSDFTQQLDKAEKDPEEGGMRPNQMVLTSIDCPTCGRKMGIRTASTGVFLGCSGYAL
+ SPKERCKTTINLIPENEVLNVLEGDDAETNALRAKRRCQKCGTAMDSYLIDPKRKLHV
+ CGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHLKMGRFGKYMACTNDECKNTR
+ KILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGIFLAANTFPKSRETRAPLVE
+ ELYRFRDRLPEKLRYLADAPQQDPEGNKTVVRFSRKTKQQYVAAEKEGKATGWSAFFV
+ DGKWVEGKK"
+ misc_feature 1204737..1207280
+ /locus_tag="SARI_01246"
+ /note="DNA topoisomerase I subunit omega; Validated;
+ Region: PRK07561"
+ /db_xref="CDD:236048"
+ misc_feature 1204740..1205195
+ /locus_tag="SARI_01246"
+ /note="TOPRIM_TopoIA_TopoI: The topoisomerase-primase
+ (TORPIM) domain found in members of the type IA family of
+ DNA topoisomerases (Topo IA) similar to Escherichia coli
+ DNA topoisomerase I. Type IA DNA topoisomerases remove
+ (relax) negative supercoils in the...; Region:
+ TOPRIM_TopoIA_TopoI; cd03363"
+ /db_xref="CDD:173783"
+ misc_feature order(1204758..1204763,1204770..1204772,1205064..1205066,
+ 1205070..1205072,1205076..1205078)
+ /locus_tag="SARI_01246"
+ /note="active site"
+ /db_xref="CDD:173783"
+ misc_feature order(1204779..1204781,1205067..1205069,1205073..1205075,
+ 1205094..1205099,1205103..1205108)
+ /locus_tag="SARI_01246"
+ /note="interdomain interaction site; other site"
+ /db_xref="CDD:173783"
+ misc_feature order(1205064..1205066,1205070..1205072)
+ /locus_tag="SARI_01246"
+ /note="putative metal-binding site [ion binding]; other
+ site"
+ /db_xref="CDD:173783"
+ misc_feature 1205073..1205075
+ /locus_tag="SARI_01246"
+ /note="nucleotide binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:173783"
+ misc_feature 1205208..1206458
+ /locus_tag="SARI_01246"
+ /note="DNA Topoisomerase, subtype IA; DNA-binding,
+ ATP-binding and catalytic domain of bacterial DNA
+ topoisomerases I and III, and eukaryotic DNA topoisomerase
+ III and eubacterial and archael reverse gyrases.
+ Topoisomerases clevage single or double stranded DNA...;
+ Region: TOP1Ac; cd00186"
+ /db_xref="CDD:238110"
+ misc_feature order(1205208..1205291,1205304..1205366)
+ /locus_tag="SARI_01246"
+ /note="domain I; other site"
+ /db_xref="CDD:238110"
+ misc_feature order(1205235..1205240,1205247..1205249,1205259..1205261,
+ 1205271..1205273,1205658..1205660,1205670..1205672,
+ 1205694..1205696,1206216..1206221,1206228..1206233,
+ 1206237..1206239,1206249..1206254)
+ /locus_tag="SARI_01246"
+ /note="DNA binding groove [nucleotide binding]"
+ /db_xref="CDD:238110"
+ misc_feature order(1205337..1205339,1205349..1205351,1206324..1206326)
+ /locus_tag="SARI_01246"
+ /note="phosphate binding site [ion binding]; other site"
+ /db_xref="CDD:238110"
+ misc_feature order(1205379..1205405,1205529..1205570,1205943..1205987,
+ 1205991..1206047,1206117..1206149)
+ /locus_tag="SARI_01246"
+ /note="domain II; other site"
+ /db_xref="CDD:238110"
+ misc_feature order(1205571..1205591,1205595..1205762,1205823..1205849,
+ 1205880..1205942)
+ /locus_tag="SARI_01246"
+ /note="domain III; other site"
+ /db_xref="CDD:238110"
+ misc_feature order(1205604..1205606,1205616..1205624,1205826..1205828,
+ 1205898..1205900,1205907..1205909,1205919..1205921,
+ 1206210..1206212,1206216..1206218,1206282..1206284)
+ /locus_tag="SARI_01246"
+ /note="nucleotide binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:238110"
+ misc_feature order(1205688..1205690,1205694..1205696,1205826..1205828)
+ /locus_tag="SARI_01246"
+ /note="catalytic site [active]"
+ /db_xref="CDD:238110"
+ misc_feature order(1206150..1206272,1206282..1206326,1206342..1206458)
+ /locus_tag="SARI_01246"
+ /note="domain IV; other site"
+ /db_xref="CDD:238110"
+ misc_feature 1206522..1206641
+ /locus_tag="SARI_01246"
+ /note="Topoisomerase DNA binding C4 zinc finger; Region:
+ zf-C4_Topoisom; pfam01396"
+ /db_xref="CDD:110400"
+ misc_feature 1206855..1206968
+ /locus_tag="SARI_01246"
+ /note="Topoisomerase DNA binding C4 zinc finger; Region:
+ zf-C4_Topoisom; pfam01396"
+ /db_xref="CDD:110400"
+ misc_feature 1207002..1207118
+ /locus_tag="SARI_01246"
+ /note="Topoisomerase I zinc-ribbon-like; Region:
+ Topo_Zn_Ribbon; pfam08272"
+ /db_xref="CDD:149367"
+ misc_feature 1207203..1207319
+ /locus_tag="SARI_01246"
+ /note="Topoisomerase I zinc-ribbon-like; Region:
+ Topo_Zn_Ribbon; pfam08272"
+ /db_xref="CDD:149367"
+ gene complement(1207422..1207586)
+ /locus_tag="SARI_01248"
+ CDS complement(1207422..1207586)
+ /locus_tag="SARI_01248"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570291.1"
+ /db_xref="GI:161503180"
+ /translation="MINHFNNVAKLLQFHNTSSRLAPSDHRLFADFVELLIRFNNKKS
+ INYNHYIIYI"
+ gene 1207542..1208516
+ /gene="cysB"
+ /locus_tag="SARI_01247"
+ CDS 1207542..1208516
+ /gene="cysB"
+ /locus_tag="SARI_01247"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="protein motif:HMMPfam:IPR005119"
+ /inference="similar to AA sequence:INSD:AAA27045.1"
+ /note="LysR-type transcriptional regulator; contains
+ helix-turn-helix (HTH) motif; in Escherichia coli this
+ protein regulates cysteine biosynthesis by controlling
+ expression of the cys regulon; autoregulates expression;
+ crystal structure of Klebsiella aerogenes showed tetramer
+ formation"
+ /codon_start=1
+ /transl_table=11
+ /product="transcriptional regulator CysB"
+ /protein_id="YP_001570292.1"
+ /db_xref="GI:161503179"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR005119"
+ /db_xref="InterPro:IPR011991"
+ /translation="MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDEL
+ GIQIFARSGKHLTQVTPAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHT
+ QARYALPGVIKGFIERYPRVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVM
+ LPCYHWNRSIVVTPEHPLAAKSSVTIEELAQYPLVTYTFGFTGRSELDTAFNHAGLTP
+ RIVFTATDADVIKTYVRLGLGVGVIASMAVDPLSDPDLVRVDTHDIFSHSTTKIGFRR
+ STFLRSYMYDFIQRFAPHLTRDVVDTAVALRSNEEIEAMFQDIKLPEK"
+ misc_feature 1207542..1208513
+ /gene="cysB"
+ /locus_tag="SARI_01247"
+ /note="transcriptional regulator CysB; Reviewed; Region:
+ cysB; PRK12681"
+ /db_xref="CDD:183678"
+ misc_feature 1207548..1207733
+ /gene="cysB"
+ /locus_tag="SARI_01247"
+ /note="Bacterial regulatory helix-turn-helix protein, lysR
+ family; Region: HTH_1; pfam00126"
+ /db_xref="CDD:215735"
+ misc_feature 1207821..1208414
+ /gene="cysB"
+ /locus_tag="SARI_01247"
+ /note="The C-terminal substrate domain of LysR-type
+ transcriptional regulator CysB contains type 2 periplasmic
+ binding fold; Region: PBP2_CysB; cd08443"
+ /db_xref="CDD:176134"
+ misc_feature order(1207839..1207841,1207845..1207850,1207983..1207991,
+ 1208037..1208039,1208145..1208147)
+ /gene="cysB"
+ /locus_tag="SARI_01247"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:176134"
+ misc_feature order(1207842..1207844,1207851..1207856,1207863..1207868,
+ 1207875..1207877,1207887..1207889,1207908..1207928,
+ 1207938..1207940,1208202..1208219,1208223..1208228,
+ 1208235..1208240,1208247..1208249,1208379..1208387,
+ 1208391..1208396)
+ /gene="cysB"
+ /locus_tag="SARI_01247"
+ /note="putative dimerization interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:176134"
+ gene 1208754..1208939
+ /locus_tag="SARI_01249"
+ CDS 1208754..1208939
+ /locus_tag="SARI_01249"
+ /inference="similar to AA sequence:REFSEQ:YP_216696.1"
+ /note="'COG: NOG13876 non supervised orthologous group;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570293.1"
+ /db_xref="GI:161503181"
+ /translation="MRRLFGVEMIRDTDSMRSVMPSENHEPRRDPELKRKAWLAVFVG
+ SALFWVVVALVIWYWWG"
+ gene 1209396..1212071
+ /locus_tag="SARI_01250"
+ CDS 1209396..1212071
+ /locus_tag="SARI_01250"
+ /inference="protein motif:BlastProDom:IPR001030"
+ /inference="protein motif:FPrintScan:IPR001030"
+ /inference="protein motif:HMMPfam:IPR000573"
+ /inference="protein motif:HMMPfam:IPR001030"
+ /inference="protein motif:HMMPIR:IPR012084"
+ /inference="protein motif:HMMTigr:IPR006249"
+ /inference="protein motif:ScanRegExp:IPR001030"
+ /inference="protein motif:superfamily:IPR001030"
+ /note="Catalyzes the conversion of citrate to isocitrate"
+ /codon_start=1
+ /transl_table=11
+ /product="aconitate hydratase"
+ /protein_id="YP_001570294.1"
+ /db_xref="GI:161503182"
+ /db_xref="InterPro:IPR000573"
+ /db_xref="InterPro:IPR001030"
+ /db_xref="InterPro:IPR006249"
+ /db_xref="InterPro:IPR012084"
+ /translation="MSSTLREASKDTLQVKDKTYHYYSLPLAAKSLGDIARLPKSLKV
+ LLENLLRWEDGESVTDEDIQALAGWLKNAQADREIAWRPARVLMQDFTGVPAVVDLAA
+ MREAVKRLGGDTAKVNPLSSVDLVIDHSVTVDHFGDDDAFEENVRLEMERNHERYMFL
+ KWGQQAFSRFSVVPPGTGICHQVNLEYLGKAVWSELQDGEWIAYPDSLVGTDSHTTMI
+ NGLGVLGWGVGGIEAEAAMLGQPVSMLIPDVVGFKLTGKLREGITATDLVLTVTQMLR
+ KHGVVGKFVEFYGDGLDSLPLADRATIANMSPEYGATCGFFPIDAITLEYMRLSGRSD
+ DLVELVETYAKAQGMWRNPGDEPVFTSTLELDMGDVEASLAGPKRPQDRVALGDVPKA
+ FAASAELELNAAQKDRQPVDYTMNGQPYQLPDGAVVIAAITSCTNTSNPSVLMAAGLL
+ AKKAVTLGLKRQPWVKASLAPGSKVVSDYLAQAKLTPYLDELGFNLVGYGCTTCIGNS
+ GPLPEPIETAIKKGDLTVGAVLSGNRNFEGRIHPLVKTNWLASPPLVVAYALAGNMNI
+ NLATDPLGYDRQGDPVYLKDIWPSAQEIARAVELVSSDMFRKEYAEVFEGTEEWKSIQ
+ VESSDTYGWQSDSTYIRLSPFFDEMQAQPAPVKDIHGARILAMLGDSVTTDHISPAGS
+ IKPDSPAGRYLQNHGVERKDFNSYGSRRGNHEVMMRGTFANIRIRNEMLPGVEGGMTR
+ HLPGTEVMSIYDAAMLYQQEKTPLAVIAGKEYGSGSSRDWAAKGPRLLGIRVVIAESF
+ ERIHRSNLIGMGILPLEFPQGVTRKTLGLTGEEVIDIADLQNLRPGATIPVTLTRPNG
+ SKETVSCRCRIDTATELTYYQNDGILHYVIRNMLN"
+ misc_feature 1209396..1212068
+ /locus_tag="SARI_01250"
+ /note="aconitate hydratase; Validated; Region: PRK09277"
+ /db_xref="CDD:236445"
+ misc_feature 1209648..1211087
+ /locus_tag="SARI_01250"
+ /note="Aconitase A catalytic domain; Region: AcnA_IRP;
+ cd01586"
+ /db_xref="CDD:153136"
+ misc_feature order(1209660..1209662,1209669..1209671,1210029..1210034,
+ 1210908..1210910,1210995..1210997,1211010..1211012)
+ /locus_tag="SARI_01250"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:153136"
+ misc_feature order(1210035..1210037,1210698..1210700,1210896..1210898,
+ 1210905..1210910,1210992..1210994)
+ /locus_tag="SARI_01250"
+ /note="ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:153136"
+ misc_feature 1211394..1211900
+ /locus_tag="SARI_01250"
+ /note="Aconitase A swivel domain. This is the major form
+ of the TCA cycle enzyme aconitate hydratase, also known as
+ aconitase and citrate hydro-lyase. It includes bacterial
+ and archaeal aconitase A, and the eukaryotic cytosolic
+ form of aconitase. This group...; Region: AcnA_IRP_Swivel;
+ cd01580"
+ /db_xref="CDD:238812"
+ misc_feature 1211721..1211729
+ /locus_tag="SARI_01250"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:238812"
+ gene complement(1212129..1212803)
+ /gene="ribA"
+ /locus_tag="SARI_01251"
+ CDS complement(1212129..1212803)
+ /gene="ribA"
+ /locus_tag="SARI_01251"
+ /inference="protein motif:HMMPfam:IPR000926"
+ /inference="protein motif:HMMTigr:IPR000926"
+ /inference="protein motif:ScanRegExp:IPR000408"
+ /inference="similar to AA sequence:INSD:AAX65612.1"
+ /note="'catalyzes the conversion of GTP to formate and
+ 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine
+ and diphosphate'"
+ /codon_start=1
+ /transl_table=11
+ /product="GTP cyclohydrolase II"
+ /protein_id="YP_001570295.1"
+ /db_xref="GI:161503183"
+ /db_xref="InterPro:IPR000408"
+ /db_xref="InterPro:IPR000926"
+ /translation="MTAALWQNSEIQANRRRHRRRQHNLETYMQLKRVAEAKLPTPLG
+ DFLMVGFEELATGHDHAALVFGDISGKTPVLARVHSECLTGDALFSLRCDCGFQLEAA
+ LTHIAEEGRGILIYHRQEGRNIGLLNKIRAYALQDQGYDTVEANHQLGFAADERDFTL
+ CADMFKLLGVDEVRLLTNNPKKVEILTEAGINIVERVPLIVGRNPNNEHYLDTKAAKM
+ GHLLSK"
+ misc_feature complement(1212138..1212716)
+ /gene="ribA"
+ /locus_tag="SARI_01251"
+ /note="GTP cyclohydrolase II (RibA). GTP cyclohydrolase
+ II catalyzes the conversion of GTP to
+ 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'
+ phosphate, formate, pyrophosphate (APy), and GMP in the
+ biosynthetic pathway of riboflavin. Riboflavin is the...;
+ Region: GTP_cyclohydro2; cd00641"
+ /db_xref="CDD:238348"
+ misc_feature complement(order(1212393..1212395,1212402..1212407,
+ 1212411..1212416,1212423..1212428,1212450..1212452,
+ 1212456..1212458,1212495..1212497,1212504..1212509,
+ 1212528..1212530,1212534..1212548,1212552..1212557,
+ 1212561..1212563,1212615..1212617,1212621..1212623,
+ 1212627..1212629,1212648..1212656,1212660..1212662,
+ 1212684..1212704))
+ /gene="ribA"
+ /locus_tag="SARI_01251"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238348"
+ misc_feature complement(order(1212258..1212260,1212267..1212275,
+ 1212336..1212338,1212342..1212344,1212378..1212380,
+ 1212396..1212398,1212405..1212407,1212417..1212419,
+ 1212438..1212449,1212510..1212512,1212519..1212521,
+ 1212525..1212527,1212552..1212554,1212558..1212575))
+ /gene="ribA"
+ /locus_tag="SARI_01251"
+ /note="active site"
+ /db_xref="CDD:238348"
+ gene 1212915..1213679
+ /locus_tag="SARI_01252"
+ CDS 1212915..1213679
+ /locus_tag="SARI_01252"
+ /inference="protein motif:HMMPfam:IPR000326"
+ /inference="protein motif:HMMSmart:IPR000326"
+ /inference="protein motif:superfamily:IPR008934"
+ /inference="similar to AA sequence:REFSEQ:NP_455787.1"
+ /note="'KEGG: sty:STY1341 1.2e-135 pgpB;
+ phosphatidylglycerophosphatase B K01096;
+ COG: COG0671 Membrane-associated phospholipid phosphatase;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphatidylglycerophosphatase B"
+ /protein_id="YP_001570296.1"
+ /db_xref="GI:161503184"
+ /db_xref="InterPro:IPR000326"
+ /db_xref="InterPro:IPR008934"
+ /translation="MLSIARRTAAGAALLLIMPLAVWISGWQWQPEHQVWWLKTLFWI
+ TETVTQPWGVITHVILCGWFLWCLRFRLRVAIMLFVILGGAIIVGQGVKSWVKERVQE
+ PRPFVVWLEKTHHIPVDEFYTLKRTERGHLVKEQLTGQQNIPVFLRQHWQKETGFAFP
+ SGHTMFAASWALLAVGLLWPRRRTFTIVFLLIWATGVMGSRLLLGMHWPRDLVVATLI
+ SWLLVTLATWLAQRICGPLTPLREEAQEIAEREQES"
+ misc_feature 1213020..1213613
+ /locus_tag="SARI_01252"
+ /note="Membrane-associated phospholipid phosphatase [Lipid
+ metabolism]; Region: PgpB; COG0671"
+ /db_xref="CDD:223743"
+ misc_feature <1213350..1213592
+ /locus_tag="SARI_01252"
+ /note="PAP2_like proteins, a super-family of histidine
+ phosphatases and vanadium haloperoxidases, includes type 2
+ phosphatidic acid phosphatase or lipid phosphate
+ phosphatase (LPP), Glucose-6-phosphatase,
+ Phosphatidylglycerophosphatase B and bacterial acid...;
+ Region: PAP2_like; cd01610"
+ /db_xref="CDD:238813"
+ misc_feature order(1213395..1213403,1213515..1213517,1213533..1213535,
+ 1213545..1213547)
+ /locus_tag="SARI_01252"
+ /note="active site"
+ /db_xref="CDD:238813"
+ unsure 1213004..1213015
+ /locus_tag="SARI_01252"
+ /note="Sequence derived from one plasmid subclone"
+ gene 1213829..1214137
+ /locus_tag="SARI_01253"
+ CDS 1213829..1214137
+ /locus_tag="SARI_01253"
+ /inference="protein motif:HMMPfam:IPR010445"
+ /inference="similar to AA sequence:INSD:AAX65610.1"
+ /note="'COG: COG3771 Predicted membrane protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570297.1"
+ /db_xref="GI:161503185"
+ /db_xref="InterPro:IPR010445"
+ /translation="MKYLLIFLLVLAIFVISVTLGAQNDQQVTFNYLLAQGEYRISTL
+ LAVLFAAGFAIGWLICGLFWLRVRVSLARAERKIKRLENKLSPAIDVAVTAGSSVAKE
+ "
+ misc_feature 1213829..1214128
+ /locus_tag="SARI_01253"
+ /note="Predicted membrane protein [Function unknown];
+ Region: COG3771"
+ /db_xref="CDD:226294"
+ gene 1214144..1215313
+ /locus_tag="SARI_01254"
+ CDS 1214144..1215313
+ /locus_tag="SARI_01254"
+ /inference="protein motif:Gene3D:IPR011990"
+ /inference="protein motif:HMMPfam:IPR013105"
+ /inference="similar to AA sequence:INSD:CAD08423.1"
+ /note="'KEGG: azo:azo1075 9.0e-60 conserved hypothetical
+ transferase protein;
+ COG: COG2956 Predicted N-acetylglucosaminyl transferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="tetratricopeptide repeat protein"
+ /protein_id="YP_001570298.1"
+ /db_xref="GI:161503186"
+ /db_xref="InterPro:IPR011990"
+ /db_xref="InterPro:IPR013105"
+ /translation="MLELLFLLLPVAAAYGWYMGRRSAQQTKQDEANRLSRDYVAGVN
+ FLLSNQQDKAVDLFLDMLKEDTGTVEAHLTLGNLFRSRGEVDRAIRIHQTLMESASLT
+ YEQRLLAVQQLGRDYMAAGLYDRAEDMFNQLTDETEFRVGALQQLLQIYQLTSDWQKA
+ IEVAERLVKLGKDKQRIEIAHFYCELALQQLGNDDMERAMALLKKGAAADKNSARVSI
+ MMGRVYMAKGDYAKAVESLQRVIVQDKELVSETLEMLQTCYQQLGKNAEWVEFLRRAV
+ EENTGAGAELMLADILEAREGSDTAQIYITRQLQRHPTMRVFHKLMDYHLNDAEEGRA
+ KESLMVLRDMVGEQVRSKPRYRCQKCGFTAYTLYWHCPSCRAWSTIKPIRGLDGQ"
+ misc_feature 1214171..1215310
+ /locus_tag="SARI_01254"
+ /note="Predicted N-acetylglucosaminyl transferase
+ [Carbohydrate transport and metabolism]; Region: COG2956"
+ /db_xref="CDD:225504"
+ misc_feature 1214267..1214539
+ /locus_tag="SARI_01254"
+ /note="Tetratricopeptide repeat domain; typically contains
+ 34 amino acids
+ [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
+ X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
+ a variety of organisms including bacteria, cyanobacteria,
+ yeast, fungi; Region: TPR; cl02429"
+ /db_xref="CDD:243034"
+ misc_feature order(1214267..1214269,1214303..1214305,1214315..1214317,
+ 1214324..1214326,1214369..1214371,1214405..1214407,
+ 1214429..1214431,1214438..1214440,1214483..1214485,
+ 1214519..1214521,1214531..1214533)
+ /locus_tag="SARI_01254"
+ /note="TPR motif; other site"
+ /db_xref="CDD:238112"
+ misc_feature order(1214270..1214275,1214360..1214365,1214369..1214374,
+ 1214381..1214386,1214474..1214479,1214486..1214491,
+ 1214498..1214503)
+ /locus_tag="SARI_01254"
+ /note="binding surface"
+ /db_xref="CDD:238112"
+ misc_feature 1214570..1214866
+ /locus_tag="SARI_01254"
+ /note="Tetratricopeptide repeat domain; typically contains
+ 34 amino acids
+ [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
+ X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
+ a variety of organisms including bacteria, cyanobacteria,
+ yeast, fungi; Region: TPR; cd00189"
+ /db_xref="CDD:238112"
+ misc_feature order(1214570..1214572,1214576..1214581,1214588..1214593,
+ 1214693..1214698,1214702..1214707,1214714..1214719,
+ 1214795..1214800,1214807..1214812,1214819..1214824)
+ /locus_tag="SARI_01254"
+ /note="binding surface"
+ /db_xref="CDD:238112"
+ misc_feature order(1214585..1214587,1214621..1214623,1214633..1214635,
+ 1214642..1214644,1214702..1214704,1214738..1214740,
+ 1214750..1214752,1214759..1214761,1214804..1214806,
+ 1214840..1214842,1214852..1214854,1214861..1214863)
+ /locus_tag="SARI_01254"
+ /note="TPR motif; other site"
+ /db_xref="CDD:238112"
+ gene 1215445..1216242
+ /locus_tag="SARI_01255"
+ CDS 1215445..1216242
+ /locus_tag="SARI_01255"
+ /inference="protein motif:HMMPfam:IPR001754"
+ /inference="protein motif:HMMTigr:IPR001754"
+ /inference="protein motif:ScanRegExp:IPR001754"
+ /inference="protein motif:superfamily:IPR011060"
+ /inference="similar to AA sequence:SwissProt:Q5PD06"
+ /note="type 1 subfamily; involved in last step of
+ pyrimidine biosynthesis; converts orotidine 5'-phosphate
+ to UMP and carbon dioxide; OMP decarboxylase; OMPDCase;
+ OMPdecase"
+ /codon_start=1
+ /transl_table=11
+ /product="orotidine 5'-phosphate decarboxylase"
+ /protein_id="YP_001570299.1"
+ /db_xref="GI:161503187"
+ /db_xref="InterPro:IPR001754"
+ /db_xref="InterPro:IPR011060"
+ /translation="MHAVYPICATSGAHHQEGLVMTFTASSSSRAITESPVVVALDYH
+ EREKALAFVDKIDPCDCRLKVGKEMFTLFGPLFVRDLQQRGFDVFLDLKFHDIPNTTA
+ RAVSAAADLGVWMVNVHASGGARMMTAARDALAPFGKDAPLLIAVTVLTSMGTSDLRD
+ LGVTLSPVEHAERLARLTQQCGLDGVVCSAREAVGFKQVFGAAFKLVTPGIRPAGSEA
+ DDQRRIMTPEQALSAGVDYMVIGRPITQSVNPAQTLKEINASLKREA"
+ misc_feature 1215553..1216215
+ /locus_tag="SARI_01255"
+ /note="Orotidine 5'-phosphate decarboxylase (ODCase)
+ is a dimeric enzyme that decarboxylates orotidine
+ 5'-monophosphate (OMP) to form uridine
+ 5'-phosphate (UMP), an essential step in the
+ pyrimidine biosynthetic pathway. In mammals, UMP
+ synthase...; Region: OMP_decarboxylase_like; cd04725"
+ /db_xref="CDD:240076"
+ misc_feature order(1215562..1215564,1215568..1215570,1215634..1215636,
+ 1215640..1215642,1215715..1215717,1215721..1215723,
+ 1215892..1215897,1216069..1216071,1216165..1216170)
+ /locus_tag="SARI_01255"
+ /note="active site"
+ /db_xref="CDD:240076"
+ misc_feature order(1215640..1215642,1215646..1215651,1215718..1215723,
+ 1215727..1215732,1215739..1215744,1215751..1215756,
+ 1215799..1215807,1215838..1215840,1215892..1215894,
+ 1215952..1215954,1216168..1216170)
+ /locus_tag="SARI_01255"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:240076"
+ gene 1216242..1216568
+ /locus_tag="SARI_01256"
+ CDS 1216242..1216568
+ /locus_tag="SARI_01256"
+ /inference="protein motif:HMMPfam:IPR001950"
+ /inference="protein motif:HMMTigr:IPR005872"
+ /inference="protein motif:superfamily:IPR001950"
+ /inference="similar to AA sequence:INSD:AAX65607.1"
+ /note="involved in start site selection during the
+ initiation of translation"
+ /codon_start=1
+ /transl_table=11
+ /product="translation initiation factor Sui1"
+ /protein_id="YP_001570300.1"
+ /db_xref="GI:161503188"
+ /db_xref="InterPro:IPR001950"
+ /db_xref="InterPro:IPR005872"
+ /translation="MSDSNSRLVYSTETGRIEEPKTALVRPKGDGIVRIQHQTSGRKG
+ KGMCLITGIEMDDPGLIKLAAELKKKCGCGGAVKDGVIEIQGDKRDLIKSLLEAKGMK
+ VKLAGG"
+ misc_feature 1216245..1216565
+ /locus_tag="SARI_01256"
+ /note="translation initiation factor Sui1; Validated;
+ Region: PRK06824"
+ /db_xref="CDD:168689"
+ misc_feature 1216332..1216559
+ /locus_tag="SARI_01256"
+ /note="Homologs of eIF1/SUI1 including Escherichia coli
+ YciH; Region: YciH_like; cd11567"
+ /db_xref="CDD:211319"
+ misc_feature order(1216359..1216361,1216371..1216376,1216380..1216382,
+ 1216434..1216436,1216443..1216451,1216455..1216463,
+ 1216467..1216469,1216494..1216496,1216503..1216505)
+ /locus_tag="SARI_01256"
+ /note="putative rRNA binding site [nucleotide binding];
+ other site"
+ /db_xref="CDD:211319"
+ unsure 1216315..1216462
+ /locus_tag="SARI_01256"
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(1216686..1216904)
+ /locus_tag="SARI_01257"
+ CDS complement(1216686..1216904)
+ /locus_tag="SARI_01257"
+ /inference="similar to AA sequence:INSD:AAL20623.1"
+ /note="'COG: NOG17005 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="lipoprotein"
+ /protein_id="YP_001570301.1"
+ /db_xref="GI:161503189"
+ /translation="MFMTSKKMAAAVLAITVAMSLSACSNWSKRDRNTAIGAGAGALG
+ GAVLTDGSTLGTLGGAAVGGVIGHQVGK"
+ misc_feature complement(<1216803..1216904)
+ /locus_tag="SARI_01257"
+ /note="lipoprotein; Provisional; Region: PRK10540"
+ /db_xref="CDD:182532"
+ gene complement(1217163..1217885)
+ /locus_tag="SARI_01258"
+ CDS complement(1217163..1217885)
+ /locus_tag="SARI_01258"
+ /inference="protein motif:HMMPfam:IPR001034"
+ /inference="protein motif:HMMSmart:IPR001034"
+ /inference="similar to AA sequence:REFSEQ:NP_455793.1"
+ /note="'COG: COG1349 Transcriptional regulators of sugar
+ metabolism;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570302.1"
+ /db_xref="GI:161503190"
+ /db_xref="InterPro:IPR001034"
+ /translation="MVVDKGQMSVAELAKITGVSEVTIRQDLNTLEKQSYLRRAHGFA
+ VSLESDDVETRMMTNYTLKRRLAEFAASLISPGESVFIENGSSNALLARTLAEQKDVT
+ IITVSSYIAHLLKETPCEVILLGGIYQKKSESMVGPLTRQFIQQVHFSKAFIGIDGWQ
+ ADTGFTGRDMMRSDVVNAVLEKGSEAIVLTDSSKFGCVHPYPLGPLSRFHRVITDSRI
+ SASNQMQLEHNGLLVNVIGSSV"
+ misc_feature complement(1217175..1217885)
+ /locus_tag="SARI_01258"
+ /note="Transcriptional regulators of sugar metabolism
+ [Transcription / Carbohydrate transport and metabolism];
+ Region: GlpR; COG1349"
+ /db_xref="CDD:224268"
+ misc_feature complement(1217748..1217885)
+ /locus_tag="SARI_01258"
+ /note="helix_turn_helix, Deoxyribose operon repressor;
+ Region: HTH_DEOR; smart00420"
+ /db_xref="CDD:197714"
+ misc_feature complement(1217238..1217717)
+ /locus_tag="SARI_01258"
+ /note="DeoR C terminal sensor domain; Region: DeoRC;
+ pfam00455"
+ /db_xref="CDD:201239"
+ gene complement(1217926..1218189)
+ /locus_tag="SARI_01259"
+ CDS complement(1217926..1218189)
+ /locus_tag="SARI_01259"
+ /inference="similar to AA sequence:REFSEQ:YP_150446.1"
+ /note="'COG: NOG34196 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570303.1"
+ /db_xref="GI:161503191"
+ /translation="MTNMSDIEAQRIAERIDTVLDILVAGNYHSAINNLEILKPELLD
+ QAKDGISPPDIGVAQGNLIAIICSGIAFNLPRFSECLFTPFNV"
+ misc_feature complement(1218025..1218180)
+ /locus_tag="SARI_01259"
+ /note="hypothetical protein; Provisional; Region:
+ PRK13658"
+ /db_xref="CDD:184215"
+ gene complement(1218214..1218507)
+ /locus_tag="SARI_01260"
+ CDS complement(1218214..1218507)
+ /locus_tag="SARI_01260"
+ /inference="protein motif:HMMPfam:IPR001633"
+ /note="'COG: COG2199 FOG: GGDEF domain;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570304.1"
+ /db_xref="GI:161503192"
+ /db_xref="InterPro:IPR001633"
+ /translation="MHELNFDYCPIDVELTESCLIKNGINERQGFLFAKPMPAVSFER
+ WYKRYLAKKCINDGIREREQHIQTGGEKNGPSCSRQNWHALFFSSLFRLISAS"
+ misc_feature complement(1218349..>1218450)
+ /locus_tag="SARI_01260"
+ /note="EAL domain. This domain is found in diverse
+ bacterial signaling proteins. It is called EAL after its
+ conserved residues and is also known as domain of unknown
+ function 2 (DUF2). The EAL domain has been shown to
+ stimulate degradation of a second...; Region: EAL;
+ cl00290"
+ /db_xref="CDD:241757"
+ gene complement(1218569..1219072)
+ /locus_tag="SARI_01261"
+ CDS complement(1218569..1219072)
+ /locus_tag="SARI_01261"
+ /inference="similar to AA sequence:REFSEQ:YP_150447.1"
+ /note="'COG: COG2199 FOG: GGDEF domain;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570305.1"
+ /db_xref="GI:161503193"
+ /translation="MMKDIQEQTVLNPFHPYWYLADDCNVLYLSPTGETDAEQTVELS
+ SEQVGRIREMTAITSSLLITLSREEQAVSMHLVGRKINKREWAGSLSTWPDMPAVTPT
+ QAQELFFAEQIVSEASIAGTRINPASGVHLIRGRVRINRSAGALGYSGMWFARLRNGA
+ IKGLICG"
+ misc_feature complement(<1218722..1219072)
+ /locus_tag="SARI_01261"
+ /note="RNase II stability modulator; Provisional; Region:
+ PRK10060"
+ /db_xref="CDD:236645"
+ gene complement(1219330..1221264)
+ /locus_tag="SARI_01262"
+ CDS complement(1219330..1221264)
+ /locus_tag="SARI_01262"
+ /inference="protein motif:HMMPfam:IPR001900"
+ /inference="protein motif:HMMPfam:IPR003029"
+ /inference="protein motif:HMMPfam:IPR013223"
+ /inference="protein motif:HMMSmart:IPR011129"
+ /inference="protein motif:HMMTigr:IPR004476"
+ /inference="protein motif:HMMTigr:IPR011804"
+ /inference="protein motif:ScanRegExp:IPR001900"
+ /inference="protein motif:superfamily:IPR008994"
+ /note="Involved in mRNA degradation. Hydrolyzes
+ single-stranded polyribonucleotides processively in the 3'
+ to 5' direction"
+ /codon_start=1
+ /transl_table=11
+ /product="exoribonuclease II"
+ /protein_id="YP_001570306.1"
+ /db_xref="GI:161503194"
+ /db_xref="InterPro:IPR001900"
+ /db_xref="InterPro:IPR003029"
+ /db_xref="InterPro:IPR004476"
+ /db_xref="InterPro:IPR008994"
+ /db_xref="InterPro:IPR011129"
+ /db_xref="InterPro:IPR011804"
+ /db_xref="InterPro:IPR013223"
+ /translation="MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSY
+ FIPPPQMKKVMHGDRIVAVIHTEKERESAEPEALIEPFLTRFVGKIQGKNDRLTIVPD
+ HPMLKDAIPCRAARGVQHEFKEGDWAVAEMRRHPLKGDRSFYADLTQYITFADDHFAP
+ WWVTLARHNLEKEAPNGVATEMLDEGLERQDLTALNFVTIDSASTEDMDDALYAEELA
+ DGRLQLTVAIADPTAWIAEGSKLDNAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRAN
+ EVRPTLTCRMIIAADGSIDDDIAFFAATIESKAKLAYDNVSDWLENSGTWQPDNEGIA
+ QQIRLLHRICLSRGEWRHHHALVFKDRPDYRFVLGEKGEVLDIVAEPRRIANRIVEES
+ MIAANLCAARVLRDKLGFGIYNVHTGFDPANADALAALLKTHGLHVDAEEVLTLEGFC
+ KLRRELDAQPSGFLDSRIRRFQSFAEISTEPGPHFGLGLEAYATWTSPIRKYGDMINH
+ RLLKAVIKGETIARPREDITQQMAERRRLNRMAERDVGDWLYARFLNDKAGTDTRFAA
+ EIIDVSRGGMRVRLVDNGAVAFIPASFLHAVRDELVCSQENGTIQIKGETVYKVTDVI
+ DVTIAEVRMDTRSIIARPAA"
+ misc_feature complement(1219336..1221264)
+ /locus_tag="SARI_01262"
+ /note="exoribonuclease II; Provisional; Region: PRK05054"
+ /db_xref="CDD:179920"
+ misc_feature complement(1221022..1221195)
+ /locus_tag="SARI_01262"
+ /note="Ribonuclease B OB domain; Region: OB_RNB;
+ pfam08206"
+ /db_xref="CDD:203875"
+ misc_feature complement(1219720..1220700)
+ /locus_tag="SARI_01262"
+ /note="RNB domain; Region: RNB; pfam00773"
+ /db_xref="CDD:216112"
+ misc_feature complement(1219348..1219584)
+ /locus_tag="SARI_01262"
+ /note="S1 RNA binding domain; Region: S1; pfam00575"
+ /db_xref="CDD:216000"
+ gene complement(1221705..1222514)
+ /locus_tag="SARI_01263"
+ CDS complement(1221705..1222514)
+ /locus_tag="SARI_01263"
+ /inference="protein motif:HMMPanther:IPR002347"
+ /inference="protein motif:HMMPfam:IPR002198"
+ /inference="similar to AA sequence:REFSEQ:NP_455797.1"
+ /note="Catalyzes a key regulatory step in fatty acid
+ biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="enoyl-(acyl carrier protein) reductase"
+ /protein_id="YP_001570307.1"
+ /db_xref="GI:161503195"
+ /db_xref="InterPro:IPR002198"
+ /db_xref="InterPro:IPR002347"
+ /translation="MTIRIKAMGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAF
+ TYQNDKLKGRVEEFAAQLGSSIVLPCDVAEDASIDAMFAELGNIWPKFDGFVHSIGFA
+ PGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRAMLNPGSALLTLSYLGAERAI
+ PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCE
+ AVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIAAMNELELK"
+ misc_feature complement(1221708..1222493)
+ /locus_tag="SARI_01263"
+ /note="enoyl-(acyl carrier protein) reductase;
+ Provisional; Region: PRK07984"
+ /db_xref="CDD:181187"
+ misc_feature complement(1221735..1222478)
+ /locus_tag="SARI_01263"
+ /note="Enoyl acyl carrier protein (ACP) reductase (ENR),
+ divergent SDR; Region: ENR_SDR; cd05372"
+ /db_xref="CDD:187630"
+ misc_feature complement(order(1221903..1221914,1221918..1221929,
+ 1222005..1222007,1222026..1222028,1222056..1222064,
+ 1222137..1222139,1222212..1222223,1222299..1222307,
+ 1222374..1222376,1222434..1222439,1222449..1222457))
+ /locus_tag="SARI_01263"
+ /note="NAD binding site [chemical binding]; other site"
+ /db_xref="CDD:187630"
+ misc_feature complement(order(1221735..1221740,1221744..1221782,
+ 1221786..1221788,1221801..1221803,1221810..1221815,
+ 1221822..1221824,1221840..1221851,1221867..1221869,
+ 1221876..1221878,1221957..1221962,1221966..1221983,
+ 1221987..1221992,1221999..1222004,1222011..1222016,
+ 1222023..1222028,1222032..1222043,1222047..1222052,
+ 1222098..1222100,1222107..1222109,1222119..1222121,
+ 1222128..1222133,1222140..1222145,1222152..1222157,
+ 1222164..1222172,1222176..1222187,1222281..1222283,
+ 1222290..1222301,1222404..1222406))
+ /locus_tag="SARI_01263"
+ /note="homotetramer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:187630"
+ misc_feature complement(order(1221963..1221971,1221975..1221983,
+ 1221987..1221992,1221999..1222004,1222011..1222016,
+ 1222023..1222028,1222035..1222043,1222047..1222052,
+ 1222098..1222100,1222107..1222112,1222119..1222121,
+ 1222128..1222133,1222140..1222145,1222152..1222157,
+ 1222164..1222172,1222176..1222187,1222290..1222301))
+ /locus_tag="SARI_01263"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:187630"
+ misc_feature complement(order(1221885..1221887,1221894..1221896,
+ 1221903..1221908,1222005..1222007,1222017..1222019,
+ 1222026..1222028,1222056..1222058,1222209..1222211,
+ 1222215..1222217))
+ /locus_tag="SARI_01263"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:187630"
+ misc_feature complement(order(1222005..1222007,1222017..1222019,
+ 1222056..1222058,1222134..1222136))
+ /locus_tag="SARI_01263"
+ /note="active site"
+ /db_xref="CDD:187630"
+ gene 1222995..1224569
+ /locus_tag="SARI_01264"
+ CDS 1222995..1224569
+ /locus_tag="SARI_01264"
+ /inference="similar to AA sequence:INSD:CAD01622.1"
+ /note="'COG: NOG18521 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570308.1"
+ /db_xref="GI:161503196"
+ /translation="MKFFENQVITVVTNMVVICFYALIIFQGTILMPFTFHIGNHSCR
+ ISESYLRDIVENKREHIFSTLERFLDFFRSIFTNRSLISDYNEIYNLLCKKKECSDIK
+ GPFSPRLFSKRDVDPTRWGPILGCIKLIDASRPETRGKYTVEVFAYHEDTSLLKMYYD
+ GLLLAETECSERSLEFLKETMFNCNTGEITLAAVGNDNLPLSEAGENGLYDAFEERLI
+ EYLSPPPGPAGDNGATAQAASLQAAEIDVFDSGAIDQTESQQVPEIDRFINSEHFKKN
+ FCIADIEKNKIGSGSYGTVYLLNGEFVVKVPINGQGMKVDFTSPEHGNCHPERVSKYL
+ NQANDDRNFSRSAIMSINGSDVTVLVSKYIHGQELDIEDEDNYNMAEELLEERGVYMH
+ DMNVFGNILVKEGKLYFVDGDQIVQSKQSRHQRAASLATKKLEEQIMTHHKIKLKQAE
+ TEGNEEDIEYYKALITDLDELIGVEPPAPEPARQPEPARQSEPARQSEPARHFKIAPP
+ EEGTLVAKVLKDKFKK"
+ gene 1225034..1225741
+ /locus_tag="SARI_01265"
+ CDS 1225034..1225741
+ /locus_tag="SARI_01265"
+ /inference="similar to AA sequence:INSD:CAD01623.1"
+ /note="'COG: COG2200 FOG: EAL domain;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570309.1"
+ /db_xref="GI:161503197"
+ /translation="MRYFFIADPIRGIEGGLQGIDISTRFASSSARPLHPEFVISSWD
+ NTQKRRFLLDLLQTIAGKRRWFLRHGLFCTVNIDRHMAQLVLQDKDIRVLLHAMLFVG
+ LQVAEHFSCYGNASIDPLISALHKQPNPLWLGDLGVGNMTAAPLVCGCFSGVKLDRSF
+ FASQIEKMTFPLLVKHIRSYCDKIVVGGLENSRYFPALKAAGVLAIQGTLFPSVALEE
+ VETLLLDSSVYTLRESI"
+ misc_feature 1225037..1225705
+ /locus_tag="SARI_01265"
+ /note="EAL domain. This domain is found in diverse
+ bacterial signaling proteins. It is called EAL after its
+ conserved residues and is also known as domain of unknown
+ function 2 (DUF2). The EAL domain has been shown to
+ stimulate degradation of a second...; Region: EAL;
+ cl00290"
+ /db_xref="CDD:241757"
+ gene complement(1225757..1226563)
+ /locus_tag="SARI_01266"
+ CDS complement(1225757..1226563)
+ /locus_tag="SARI_01266"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:REFSEQ:YP_150452.1"
+ /note="'KEGG: hpa:HPAG1_0304 1.8e-52 dipeptide ABC
+ transporter K00927;
+ COG: COG4167 ABC-type antimicrobial peptide transport
+ system, ATPase component;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570310.1"
+ /db_xref="GI:161503198"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MVQTLLEVRNLSKTFRYRTGWFRRQTVDAVKPLSFTLRERQTLA
+ IIGENGSGKSTLAKMLAGMIEPTSGELFIDDHPLHFGDYSFRSQCIRMIFQDPSTSLN
+ PRQRISQILDFPLRLNTDLEPEQRRKQIVETMRMVGLLPDHVSYYPHMLAPGQKQRLG
+ LARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHIGMMKHIS
+ DQVLVMHQGEVVERGSTADVLASPLHELTRRLIAGHFGEALTADAWRMDR"
+ misc_feature complement(1225760..1226560)
+ /locus_tag="SARI_01266"
+ /note="antimicrobial peptide ABC system ATP-binding
+ protein SapF; Provisional; Region: PRK15112"
+ /db_xref="CDD:185067"
+ misc_feature complement(1225865..1226551)
+ /locus_tag="SARI_01266"
+ /note="ATP-binding cassette domain of nickel/oligopeptides
+ specific transporters; Region: ABC_NikE_OppD_transporters;
+ cd03257"
+ /db_xref="CDD:213224"
+ misc_feature complement(1226402..1226425)
+ /locus_tag="SARI_01266"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(order(1225937..1225939,1226036..1226041,
+ 1226279..1226281,1226399..1226407,1226411..1226416))
+ /locus_tag="SARI_01266"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(1226279..1226290)
+ /locus_tag="SARI_01266"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(1226084..1226113)
+ /locus_tag="SARI_01266"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(1226036..1226053)
+ /locus_tag="SARI_01266"
+ /note="Walker B; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(1226018..1226029)
+ /locus_tag="SARI_01266"
+ /note="D-loop; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(1225931..1225951)
+ /locus_tag="SARI_01266"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213224"
+ gene complement(1226565..1227557)
+ /locus_tag="SARI_01267"
+ CDS complement(1226565..1227557)
+ /locus_tag="SARI_01267"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMPfam:IPR013563"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR010066"
+ /inference="similar to AA sequence:INSD:"
+ /note="'KEGG: ret:RHE_CH00739 6.4e-66 dppDch1, dppFch1;
+ dipeptide ABC transporter, ATP-binding protein K02031;
+ COG: COG4170 ABC-type antimicrobial peptide transport
+ system, ATPase component;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570311.1"
+ /db_xref="GI:161503199"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR010066"
+ /db_xref="InterPro:IPR013563"
+ /translation="MPLLDIRNLTIEFKTSEGWVKAVDRVSMTLSEGEIRGLVGESGS
+ GKSLIAKAICGVAKDNWRVTADRMRFDDIDLLRLSARERRKLVGHNVSMIFQEPQSCL
+ DPSERVGRQLMQNIPSWTWKGRWWQRLGWRKRRAIELLHRVGIKDHKDAMRSFPYELT
+ DGECQKVMIAIALANQPRLLIADEPTNSMEPTTQAQIFRLLTRLNQNSNTTILLISHD
+ LQMLSQWADKINVLYCGQTVETAPSKDLVTTPHHPYTQALIRAIPDFGSAMPHKSRLN
+ TLPGAIPLLEQLPIGCRLGPRCPYAQRECIITPRLTGAKNHLYACHFPLNMERE"
+ misc_feature complement(1226568..1227557)
+ /locus_tag="SARI_01267"
+ /note="antimicrobial peptide ABC transporter ATP-binding
+ protein; Provisional; Region: PRK15093"
+ /db_xref="CDD:185049"
+ misc_feature complement(1226835..1227551)
+ /locus_tag="SARI_01267"
+ /note="ATP-binding cassette domain of nickel/oligopeptides
+ specific transporters; Region: ABC_NikE_OppD_transporters;
+ cd03257"
+ /db_xref="CDD:213224"
+ misc_feature complement(1227417..1227440)
+ /locus_tag="SARI_01267"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(order(1226907..1226909,1227006..1227011,
+ 1227270..1227272,1227414..1227422,1227426..1227431))
+ /locus_tag="SARI_01267"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(1227270..1227281)
+ /locus_tag="SARI_01267"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(1227054..1227083)
+ /locus_tag="SARI_01267"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(1227006..1227023)
+ /locus_tag="SARI_01267"
+ /note="Walker B; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(1226988..1226999)
+ /locus_tag="SARI_01267"
+ /note="D-loop; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(1226901..1226921)
+ /locus_tag="SARI_01267"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(1226589..1226852)
+ /locus_tag="SARI_01267"
+ /note="Oligopeptide/dipeptide transporter, C-terminal
+ region; Region: oligo_HPY; cl07097"
+ /db_xref="CDD:244611"
+ gene complement(1227557..1228447)
+ /locus_tag="SARI_01268"
+ CDS complement(1227557..1228447)
+ /locus_tag="SARI_01268"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="similar to AA sequence:INSD:CAD01626.1"
+ /note="'KEGG: lwe:lwe0999 0.00037 gbuB; glycine
+ betaine/L-proline ABC transporter, permease protein;
+ COG: COG4171 ABC-type antimicrobial peptide transport
+ system, permease component;
+ Psort location: endoplasmic reticulum, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570312.1"
+ /db_xref="GI:161503200"
+ /db_xref="InterPro:IPR000515"
+ /translation="MPYDSVYSEKRPPGTLRTAWRKFYSDAPAMVGLYGCVALALLCI
+ FGGWIAPYGIDQQFLGYQLLPPSWSRYGEVSFFLGTDDLGRDVLSRLLSGAAPTVGGA
+ FIVTLAATLCGLILGVVAGATHGLRSAVLNHILDTLLSLPSLLLAIIVVAFAGPHLSH
+ AMFAVWLALLPRMVRSVYSMVHDELEKEYVIAARLDGATTLNILWFAILPNITAGLVT
+ EITRALSMAILDIAALGFLDLGAQLPSPEWGAMLGDALELIYVAPWTVMLPGAAITLS
+ VLLVNLLGDGIRRAIIAGVE"
+ misc_feature complement(1227560..1228447)
+ /locus_tag="SARI_01268"
+ /note="antimicrobial peptide ABC transporter permease
+ SapC; Provisional; Region: PRK15111"
+ /db_xref="CDD:185066"
+ misc_feature complement(1228247..1228402)
+ /locus_tag="SARI_01268"
+ /note="N-terminal TM domain of oligopeptide transport
+ permease C; Region: OppC_N; pfam12911"
+ /db_xref="CDD:221848"
+ misc_feature complement(1227644..1228156)
+ /locus_tag="SARI_01268"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(1227644..1227646,1227650..1227655,
+ 1227662..1227667,1227695..1227700,1227740..1227745,
+ 1227752..1227763,1227782..1227784,1227791..1227796,
+ 1227836..1227838,1227887..1227889,1227896..1227901,
+ 1227911..1227913,1227917..1227922,1227929..1227931,
+ 1227935..1227937,1227941..1227946,1227995..1227997,
+ 1228001..1228006,1228013..1228042,1228046..1228057,
+ 1228085..1228087,1228100..1228105,1228112..1228117))
+ /locus_tag="SARI_01268"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(1227746..1227763,1227995..1228039))
+ /locus_tag="SARI_01268"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(1227665..1227667,1227695..1227697,
+ 1227704..1227706,1227743..1227745,1227959..1227961,
+ 1227995..1227997))
+ /locus_tag="SARI_01268"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(1227815..1227817,1227827..1227832,
+ 1227848..1227886))
+ /locus_tag="SARI_01268"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene complement(1228840..1229046)
+ /locus_tag="SARI_01269"
+ CDS complement(1228840..1229046)
+ /locus_tag="SARI_01269"
+ /inference="protein motif:HMMPfam:IPR001584"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:INSD:BAA84895.1"
+ /note="'COG: COG2801 Transposase and inactivated
+ derivatives;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570313.1"
+ /db_xref="GI:161503201"
+ /db_xref="InterPro:IPR001584"
+ /db_xref="InterPro:IPR012337"
+ /translation="MERIFRSLKNEWMPVVGYVSFSEAAHAITDYIVGYYSALRPHEY
+ NGGLPPNESENRYWKNSNAVASFS"
+ misc_feature complement(1228897..>1229043)
+ /locus_tag="SARI_01269"
+ /note="Integrase core domain; Region: rve_3; cl15866"
+ /db_xref="CDD:247111"
+ gene complement(1229165..1229890)
+ /locus_tag="SARI_01270"
+ CDS complement(1229165..1229890)
+ /locus_tag="SARI_01270"
+ /inference="protein motif:HMMPfam:IPR001584"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:REFSEQ:NP_958229.1"
+ /note="'COG: COG2801 Transposase and inactivated
+ derivatives;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570314.1"
+ /db_xref="GI:161503202"
+ /db_xref="InterPro:IPR001584"
+ /db_xref="InterPro:IPR012337"
+ /translation="MPLNMVRNMSILARIIMKSATVIAYSTGLNEGQNHWVTLSSKIL
+ SYACEPGVSQEGYRAPDVRLPERFPITGKLRAQYPEFILCHVCGVHRSSYRYRENRPE
+ KPDGRRAVLRSQVLELHGISHGSAGARSIATMATRRGYQMGRWLAGRLMKEPGLVSCQ
+ QPTHRYKRGGHEHIAIPNHPERQFAVTGPNQVWCGNVTYIWTGKRWAYLAVVLDLFAR
+ KPAGRAMSFSPDSRLTMKALEMA"
+ misc_feature complement(1229387..1229572)
+ /locus_tag="SARI_01270"
+ /note="HTH-like domain; Region: HTH_21; pfam13276"
+ /db_xref="CDD:222019"
+ misc_feature complement(<1229168..1229326)
+ /locus_tag="SARI_01270"
+ /note="Integrase core domain; Region: rve; pfam00665"
+ /db_xref="CDD:216050"
+ gene complement(1230036..1230377)
+ /locus_tag="SARI_01271"
+ CDS complement(1230036..1230377)
+ /locus_tag="SARI_01271"
+ /inference="similar to AA sequence:INSD:ABL64095.1"
+ /note="'COG: COG3547 Transposase and inactivated
+ derivatives;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570315.1"
+ /db_xref="GI:161503203"
+ /translation="MSKEISMKKSSRMSVIHPHAAGVDIGAEFHVVAVPPDADAAPVR
+ TFQRFTGDLHRMSDWLKTCHITTIAMESTGVYWLPAFEIPEAAGFNVILVNARDAKNV
+ PGRKTDVNDAQ"
+ misc_feature complement(<1230039..1230317)
+ /locus_tag="SARI_01271"
+ /note="Transposase; Region: DEDD_Tnp_IS110; pfam01548"
+ /db_xref="CDD:216564"
+ gene complement(1230592..1231014)
+ /locus_tag="SARI_01273"
+ CDS complement(1230592..1231014)
+ /locus_tag="SARI_01273"
+ /inference="protein motif:HMMPfam:IPR002514"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:SwissProt:P39213"
+ /note="'COG: COG2963 Transposase and inactivated
+ derivatives;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570316.1"
+ /db_xref="GI:161503205"
+ /db_xref="InterPro:IPR002514"
+ /db_xref="InterPro:IPR009057"
+ /translation="MPFAKDVFLSLPLHEAELLFQPLRLLPIPTGCELKWHTEFGHLN
+ RGDMLTSEQHRCSNEKRNFSAEFKRESAQLVVDQNYTVADAAKAMDVGLSTMTRWVKQ
+ LRDARQGKTPKASPITPEQIEIRELRKNYNVLKWITKY"
+ misc_feature complement(<1230625..1230837)
+ /locus_tag="SARI_01273"
+ /note="Transposase and inactivated derivatives [DNA
+ replication, recombination, and repair]; Region: COG2963"
+ /db_xref="CDD:225511"
+ misc_feature complement(1230628..1230837)
+ /locus_tag="SARI_01273"
+ /note="Transposase; Region: HTH_Tnp_1; pfam01527"
+ /db_xref="CDD:201841"
+ gene 1231008..1231145
+ /locus_tag="SARI_01272"
+ CDS 1231008..1231145
+ /locus_tag="SARI_01272"
+ /inference="protein motif:HMMPfam:IPR003458"
+ /inference="similar to AA sequence:REFSEQ:NP_459904.1"
+ /note="'COG: COG5525 Bacteriophage tail assembly protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570317.1"
+ /db_xref="GI:161503204"
+ /db_xref="InterPro:IPR003458"
+ /translation="MASGKIAPLQDAVDLGMATDDEKAQLDEWKKYRVLVNRVDTSNP
+ D"
+ misc_feature <1231008..1231142
+ /locus_tag="SARI_01272"
+ /note="Caudovirales tail fibre assembly protein; Region:
+ Caudo_TAP; pfam02413"
+ /db_xref="CDD:217022"
+ gene complement(1231360..1232052)
+ /locus_tag="SARI_01274"
+ CDS complement(1231360..1232052)
+ /locus_tag="SARI_01274"
+ /inference="similar to AA sequence:INSD:AAT12442.1"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570318.1"
+ /db_xref="GI:161503206"
+ /translation="MLKHLQNSLSSINKSNTVTSQDDKNQINHHRNFQSQIDTTNNIL
+ YNNCWVCSLNVIKSRDGDNYSALEDIISNNQAFNNVLEGVDIIECENLLKELNVQKIP
+ ESSFFTNIKEALQAEAFNSTIENDFESFISYELQNHGPLMLIRPSLGSECLHAECIVG
+ YDREEKKVLIYDSMNTSPKWQSNIDVYDRLTLAFNDKYKNEDCSICGLYYDGAYEPKP
+ LHSSWKDWCTIL"
+ gene 1232506..1232871
+ /locus_tag="SARI_01275"
+ CDS 1232506..1232871
+ /locus_tag="SARI_01275"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR006119"
+ /inference="protein motif:HMMPfam:IPR006120"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:INSD:BAB33707.1"
+ /note="'COG: COG1961 Site-specific recombinases, DNA
+ invertase Pin homologs;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570319.1"
+ /db_xref="GI:161503207"
+ /db_xref="InterPro:IPR006119"
+ /db_xref="InterPro:IPR006120"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /translation="MRHLVVLVEELRERGVNFRSLTDSIDTSTPMGRFFFHVMGVLAE
+ MERELIVERTRAGLEAARAQGRIGGRRPKLTPEQWAQAGRLIGAGVPRQQVAIIYDVG
+ LSTLYRKFPAASRSETRRR"
+ misc_feature <1232548..1232838
+ /locus_tag="SARI_01275"
+ /note="Site-specific recombinases, DNA invertase Pin
+ homologs [DNA replication, recombination, and repair];
+ Region: PinR; COG1961"
+ /db_xref="CDD:224872"
+ misc_feature <1232548..1232676
+ /locus_tag="SARI_01275"
+ /note="Serine Recombinase family, catalytic domain; a DNA
+ binding domain may be present either N- or C-terminal to
+ the catalytic domain. These enzymes perform site-specific
+ recombination of DNA molecules by a concerted, four-strand
+ cleavage and rejoining...; Region: Ser_Recombinase;
+ cl02788"
+ /db_xref="CDD:243186"
+ misc_feature 1232719..1232829
+ /locus_tag="SARI_01275"
+ /note="Helix-turn-helix domain of Hin and related
+ proteins, a family of DNA-binding domains unique to
+ bacteria and represented by the Hin protein of Salmonella.
+ The basic HTH domain is a simple fold comprised of three
+ core helices that form a right-handed...; Region:
+ HTH_Hin_like; cd00569"
+ /db_xref="CDD:119388"
+ misc_feature order(1232719..1232721,1232815..1232820,1232824..1232829)
+ /locus_tag="SARI_01275"
+ /note="DNA-binding interface [nucleotide binding]; DNA
+ binding site"
+ /db_xref="CDD:119388"
+ gene complement(1232845..1233048)
+ /locus_tag="SARI_01276"
+ CDS complement(1232845..1233048)
+ /locus_tag="SARI_01276"
+ /note="'Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570320.1"
+ /db_xref="GI:161503208"
+ /translation="MVCLTIAAIEIIKNTIKSICYVFIFVVNLFFSTQAYTHYFLLSP
+ AVHVSMMIAGDLSSLSAPTGFTS"
+ gene complement(1233030..1233995)
+ /locus_tag="SARI_01277"
+ CDS complement(1233030..1233995)
+ /locus_tag="SARI_01277"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="similar to AA sequence:INSD:CAD01636.1"
+ /note="'KEGG: syf:Synpcc7942_2454 2.4e-27 adenine
+ phosphoribosyltransferase K00759;
+ COG: COG4168 ABC-type antimicrobial peptide transport
+ system, permease component;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570321.1"
+ /db_xref="GI:161503209"
+ /db_xref="InterPro:IPR000515"
+ /translation="MIIFTLRRLLLLLVTLFFLTFIGFSLSYFTPHAPLQGASLWNAW
+ VFWFNGLLHWDFGVSSINGQLISEQLKEVFPATMELCILAFGFALMVGIPVGMLAGVT
+ RSKWPDRSISALALLGFSIPVFWLALLLTLFFSLTLGWLPVSGRFDLLYEVKPATGFA
+ IIDAWISDSPWRDEMVMSAIRHMVLPVLTLSVAPTTEVIRLMRISTIEVYDQNYVKAA
+ ATRGLSRFTILRRHVLHNALPPVIPRLGLQFSTMLTLAMITEMVFSWPGLGRWLIHAI
+ RQQDYAAISAGVMVIGSLVIVVNVISDILGAMANPLKHKEWYALR"
+ misc_feature complement(1233033..1233995)
+ /locus_tag="SARI_01277"
+ /note="antimicrobial peptide ABC transporter permease
+ SapB; Provisional; Region: PRK15110"
+ /db_xref="CDD:185065"
+ misc_feature complement(1233105..1233776)
+ /locus_tag="SARI_01277"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(1233105..1233110,1233117..1233122,
+ 1233129..1233134,1233138..1233143,1233150..1233155,
+ 1233183..1233188,1233213..1233218,1233225..1233236,
+ 1233255..1233257,1233264..1233269,1233309..1233311,
+ 1233360..1233362,1233369..1233374,1233384..1233386,
+ 1233390..1233395,1233402..1233404,1233408..1233410,
+ 1233414..1233419,1233510..1233512,1233516..1233521,
+ 1233528..1233530,1233624..1233650,1233654..1233665,
+ 1233696..1233698,1233711..1233716,1233723..1233728))
+ /locus_tag="SARI_01277"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(1233219..1233236,1233510..1233530,
+ 1233624..1233647))
+ /locus_tag="SARI_01277"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(1233153..1233155,1233183..1233185,
+ 1233192..1233194,1233216..1233218,1233432..1233434,
+ 1233510..1233512))
+ /locus_tag="SARI_01277"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(1233288..1233290,1233300..1233305,
+ 1233321..1233359))
+ /locus_tag="SARI_01277"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene complement(1233992..1235641)
+ /locus_tag="SARI_01278"
+ CDS complement(1233992..1235641)
+ /locus_tag="SARI_01278"
+ /inference="protein motif:HMMPfam:IPR000914"
+ /inference="protein motif:ScanRegExp:IPR000914"
+ /inference="similar to AA sequence:SwissProt:P36634"
+ /note="'KEGG: shn:Shewana3_2650 1.9e-122 acetate kinase
+ K00925;
+ COG: COG4166 ABC-type oligopeptide transport system,
+ periplasmic component;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570322.1"
+ /db_xref="GI:161503210"
+ /db_xref="InterPro:IPR000914"
+ /translation="MRLVLSSLIVIAGLLSSQATAATAPEQTASADIRDSGFVYCVSG
+ QVNTFNPQKASSGLIVDTLAAQLYDRLLDVDPYTYRLVPELAESWEVLDNGATYRFHL
+ RRDVSFQKTAWFTPTRKLNADDVVFTFQRIFDRQHPWHNINGSNFPYFDSLQFADNVK
+ SVRKLDNNTVEFRLTQPDASFLWHLATHYASVMSAEYAAQLSRKDRQELLDRQPVGTG
+ PFQLSEYRAGQFIRLQRHDGFWRGKPLMPQVVVDLGSGGTGRLSKLLTGECDVLAWPA
+ ASQLTILRDDPRLRLTLRPGMNIAYLAFNTDKPPLNNPAVRHALALSINNQRLMQSIY
+ YGTAETAASILPRASWAYDNDAKITEYNPEKSREQLKTLGIENFTLHLWVPTSSQAWN
+ PSPLKTAELIQADMAQVGVKVVIVPVEGRFQEARLMDMNHDLTLSGWATDSNDPDSFF
+ RPLLSCAAINSQTNFAHWCNPEFDSVLRKALSSQQLASRIEAYDEAQNILAKELPILP
+ LASSLRLQAYRYDIKGLVLSPFGNASFAGVSREKHEEVKKP"
+ misc_feature complement(1234016..1235539)
+ /locus_tag="SARI_01278"
+ /note="ABC-type oligopeptide transport system, periplasmic
+ component [Amino acid transport and metabolism]; Region:
+ OppA; COG4166"
+ /db_xref="CDD:226636"
+ misc_feature complement(1234067..1235533)
+ /locus_tag="SARI_01278"
+ /note="The substrate-binding component of an ABC-type
+ dipeptide import system contains the type 2 periplasmic
+ binding fold; Region: PBP2_DppA_like; cd08493"
+ /db_xref="CDD:173858"
+ misc_feature complement(order(1234316..1234318,1234322..1234333,
+ 1234370..1234372,1234382..1234384))
+ /locus_tag="SARI_01278"
+ /note="peptide binding site [polypeptide binding]; other
+ site"
+ /db_xref="CDD:173858"
+ gene complement(1235753..1236733)
+ /gene="pspF"
+ /locus_tag="SARI_01279"
+ CDS complement(1235753..1236733)
+ /gene="pspF"
+ /locus_tag="SARI_01279"
+ /inference="protein motif:HMMPfam:IPR002078"
+ /inference="protein motif:HMMPfam:IPR002197"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR002078"
+ /inference="protein motif:superfamily:IPR008931"
+ /inference="similar to AA sequence:REFSEQ:YP_216671.1"
+ /note="'transcriptional activator for pspABCE which are
+ induced in response to phage proteins, membrane altering
+ stresses, and impaired proton expor'"
+ /codon_start=1
+ /transl_table=11
+ /product="phage shock protein operon transcriptional
+ activator"
+ /protein_id="YP_001570323.1"
+ /db_xref="GI:161503211"
+ /db_xref="InterPro:IPR002078"
+ /db_xref="InterPro:IPR002197"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR008931"
+ /translation="MAEFKDNLLGEANRFLEVLEQVSRLAPLDKPVLIIGERGTGKEL
+ IANRLHYLSSRWQGPLISLNCAALNENLLDSELFGHEAGAFTGAQKRHPGRFERADGG
+ TLFLDELATAPMLVQEKLLRVIEYGELERVGGSQPLQVNVRLVCATNADLPAMVKDGT
+ FRADLLDRLAFDVVQLPPLRERQSDIMLMAEHFAIQMCRELGLPLFPGFTDRAKETLL
+ HYAWPGNVRELKNVVERSVYRHGSSEHPLDDIVIDPFQRHPDEPPVPAPPAPSATPAL
+ PLKLREFQLQQEKALLQRSLQQAKFNQKRAADLLGLTYHQFRALLKKHQL"
+ misc_feature complement(1235756..1236733)
+ /gene="pspF"
+ /locus_tag="SARI_01279"
+ /note="phage shock protein operon transcriptional
+ activator; Provisional; Region: pspF; PRK11608"
+ /db_xref="CDD:236936"
+ misc_feature complement(1236227..1236685)
+ /gene="pspF"
+ /locus_tag="SARI_01279"
+ /note="The AAA+ (ATPases Associated with a wide variety of
+ cellular Activities) superfamily represents an ancient
+ group of ATPases belonging to the ASCE (for additional
+ strand, catalytic E) division of the P-loop NTPase fold.
+ The ASCE division also includes ABC; Region: AAA; cd00009"
+ /db_xref="CDD:99707"
+ misc_feature complement(1236605..1236628)
+ /gene="pspF"
+ /locus_tag="SARI_01279"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(order(1236287..1236289,1236413..1236415,
+ 1236602..1236625))
+ /gene="pspF"
+ /locus_tag="SARI_01279"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(1236410..1236427)
+ /gene="pspF"
+ /locus_tag="SARI_01279"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(1236230..1236232)
+ /gene="pspF"
+ /locus_tag="SARI_01279"
+ /note="arginine finger; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(1235762..1235872)
+ /gene="pspF"
+ /locus_tag="SARI_01279"
+ /note="Bacterial regulatory protein, Fis family; Region:
+ HTH_8; pfam02954"
+ /db_xref="CDD:202485"
+ gene 1236904..1237572
+ /locus_tag="SARI_01280"
+ CDS 1236904..1237572
+ /locus_tag="SARI_01280"
+ /inference="protein motif:HMMPfam:IPR007157"
+ /inference="similar to AA sequence:REFSEQ:YP_150463.1"
+ /note="involved in maintaining membrane potential under
+ membrane stress conditions; also acts as a negative
+ transcriptional regulator of the phage shock protein (psp)
+ operon(pspABCDE) by regulating the transcriptional
+ activator PspF"
+ /codon_start=1
+ /transl_table=11
+ /product="phage shock protein PspA"
+ /protein_id="YP_001570324.1"
+ /db_xref="GI:161503212"
+ /db_xref="InterPro:IPR007157"
+ /translation="MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVR
+ SNSARALAEKKQLSRRIEQATAQQTEWQEKAELALRKDKDDLARAALIEKQKLTDLIA
+ TLEQEVTLVDDTLARMKKEIGELENKLSETRARQQALMLRHQAASSSRDVRRQLDSGK
+ LDEAMARFESFERRIDQMEAEAESHHFGKQQSLDQQFANLKADDEISEQLAQLKAKMK
+ QDNQ"
+ misc_feature 1236904..1237569
+ /locus_tag="SARI_01280"
+ /note="phage shock protein PspA; Provisional; Region:
+ PRK10698"
+ /db_xref="CDD:182657"
+ gene 1237634..1237858
+ /gene="pspB"
+ /locus_tag="SARI_01281"
+ CDS 1237634..1237858
+ /gene="pspB"
+ /locus_tag="SARI_01281"
+ /inference="protein motif:HMMPfam:IPR009554"
+ /inference="similar to AA sequence:INSD:AAV77152.1"
+ /note="'acts together with PspC to induce psp operon
+ during infection with phage, exposure to ethanol or
+ osmotic shock; forms a complex with PspA and C; PspC is
+ required for PspAB binding'"
+ /codon_start=1
+ /transl_table=11
+ /product="phage shock protein B"
+ /protein_id="YP_001570325.1"
+ /db_xref="GI:161503213"
+ /db_xref="InterPro:IPR009554"
+ /translation="MSALFLAIPLTIFVLFVLPIWLWLHYSNRVDRGELSQSEQQRLL
+ QLTDDAQRMRERIQALEDILDAEHPNWRER"
+ misc_feature 1237634..1237855
+ /gene="pspB"
+ /locus_tag="SARI_01281"
+ /note="phage shock protein B; Provisional; Region: pspB;
+ PRK09458"
+ /db_xref="CDD:236526"
+ gene 1237858..1238217
+ /locus_tag="SARI_01282"
+ CDS 1237858..1238217
+ /locus_tag="SARI_01282"
+ /inference="protein motif:HMMPfam:IPR007168"
+ /inference="similar to AA sequence:REFSEQ:YP_150465.1"
+ /note="'with PsbB forms toxin/antitoxin pair; activates
+ the psp operon in response to phage infection, exposure to
+ ethanol or osmotic shock'"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional activator PspC"
+ /protein_id="YP_001570326.1"
+ /db_xref="GI:161503214"
+ /db_xref="InterPro:IPR007168"
+ /translation="MGGINLNKKLWRIPQKGMMRGVCAGIADYLDVPVKLVRILVVLS
+ IFFGLAFFTVVAYIVLSFILDPMPDNLATSESQPNSGELLDAVDRELAAGEKRLRDME
+ RYVTSDTFTLRSRFRQL"
+ misc_feature 1237861..1238214
+ /locus_tag="SARI_01282"
+ /note="DNA-binding transcriptional activator PspC;
+ Provisional; Region: PRK10697"
+ /db_xref="CDD:182656"
+ misc_feature 1237876..1238214
+ /locus_tag="SARI_01282"
+ /note="phage shock protein C; Region: phageshock_pspC;
+ TIGR02978"
+ /db_xref="CDD:132023"
+ gene 1238218..1238469
+ /locus_tag="SARI_01283"
+ CDS 1238218..1238469
+ /locus_tag="SARI_01283"
+ /inference="similar to AA sequence:REFSEQ:YP_150466.1"
+ /note="'COG: NOG14121 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="peripheral inner membrane phage-shock protein"
+ /protein_id="YP_001570327.1"
+ /db_xref="GI:161503215"
+ /translation="MIIGKVKMNTRWQRAGQKVKPGFKIAGKLVLLTALRYGPAGVAG
+ WAVKSVARRPLKMLLAFALEPLLNRAAAKIAKRYRGNRT"
+ misc_feature 1238239..1238457
+ /locus_tag="SARI_01283"
+ /note="peripheral inner membrane phage-shock protein;
+ Provisional; Region: PRK10497"
+ /db_xref="CDD:182498"
+ gene 1238652..1240340
+ /locus_tag="SARI_01284"
+ CDS 1238652..1240340
+ /locus_tag="SARI_01284"
+ /inference="protein motif:Gene3D:IPR013781"
+ /inference="protein motif:HMMPfam:IPR006047"
+ /inference="protein motif:HMMSmart:IPR006589"
+ /inference="similar to AA sequence:REFSEQ:ZP_01699325.1"
+ /note="'KEGG: ece:Z2475m 3.7e-228 glycosidase K00690;
+ COG: COG0366 Glycosidases;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570328.1"
+ /db_xref="GI:161503216"
+ /db_xref="InterPro:IPR006047"
+ /db_xref="InterPro:IPR006589"
+ /db_xref="InterPro:IPR013781"
+ /translation="MKVNQKIEKYLSEIYGKTFTPRHYEALNSRIEKARLLISKKRKT
+ HWDERDVVLITYADQFHSDTSKPLPTFNKFHRQWLAATFSHLHLLPFCPWSSDDGFSV
+ VDYYQVAPETGDWEDISDLSQSSQLMFDFVCNHMSAKSEWFNHYLQQAPGFENFFIAV
+ DPSTDLSAVTRPRALPLLTPFTLKDKSVHHLWTTFSDDQIDLNYRCPDVLLAMVDVLL
+ TYLEKGADYIRLDAVGFMWKIPGTTCIHLPQTHLLIKLFRAITDDVAPGTVIITETNV
+ PHKDNIAYLGNGEDEAHMVYQFSLPPLVLHAVHGQDVRALCSWAQSLTLPSENTTWFN
+ FLASHDGIGLNPLRGLLPEDEILKLVEDLQQEGALVNWKNNPDGSRSPYEINVTYMDA
+ LSDRYSTDDQRLARFILAHAILLSFPGVPAIYIQSILGSRNDYDGVTQLGYNRAINRK
+ KYRRTEIEAELMDETTLRYRVYHALSRLIEIRRNNKAFHPESQFSIKNISPCVMQIER
+ VAKTGESIVALFNVSDNINTINSKKFQGTDLISETNLTGEVLTLHPWQVLWIKK"
+ misc_feature 1238787..1240154
+ /locus_tag="SARI_01284"
+ /note="Alpha amylase catalytic domain found in sucrose
+ phosphorylase-like proteins (also called sucrose
+ glucosyltransferase, disaccharide glucosyltransferase, and
+ sucrose-phosphate alpha-D glucosyltransferase); Region:
+ AmyAc_Sucrose_phosphorylase-like_1; cd11356"
+ /db_xref="CDD:200493"
+ misc_feature 1238802..1240208
+ /locus_tag="SARI_01284"
+ /note="sucrose phosphorylase; Region: sucrose_gtfA;
+ TIGR03852"
+ /db_xref="CDD:163564"
+ misc_feature order(1238940..1238942,1238949..1238951,1239054..1239056,
+ 1239234..1239236,1239246..1239248,1239336..1239338,
+ 1239342..1239347,1239354..1239356,1239468..1239470,
+ 1239474..1239476,1239666..1239671,1239789..1239794,
+ 1239801..1239803,1239984..1239986)
+ /locus_tag="SARI_01284"
+ /note="active site"
+ /db_xref="CDD:200493"
+ misc_feature order(1239111..1239113,1239129..1239134,1239138..1239140,
+ 1239147..1239152,1239171..1239176,1239186..1239191,
+ 1239210..1239215,1239219..1239221,1239966..1239968,
+ 1239975..1239977)
+ /locus_tag="SARI_01284"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:200493"
+ misc_feature order(1239342..1239344,1239468..1239470,1239669..1239671)
+ /locus_tag="SARI_01284"
+ /note="catalytic site [active]"
+ /db_xref="CDD:200493"
+ gene 1240354..1241646
+ /locus_tag="SARI_01285"
+ CDS 1240354..1241646
+ /locus_tag="SARI_01285"
+ /inference="protein motif:HMMPfam:IPR006059"
+ /inference="similar to AA sequence:REFSEQ:ZP_01699324.1"
+ /note="'KEGG: eci:UTI89_C1581 3.9e-201 ycjN; putative ABC
+ transporter periplasmic binding protein YcjN precursor
+ K02027;
+ COG: COG1653 ABC-type sugar transport system, periplasmic
+ component;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570329.1"
+ /db_xref="GI:161503217"
+ /db_xref="InterPro:IPR006059"
+ /translation="MLKTKIVLLSALVSCALISGCNDQKKSNTSIEFMHSSVEQERQA
+ VISQLIARFEKENPDITVKQVPVEEDAYNTKVITLARSGSLPEVIETSHDYAKVMDKE
+ QLIDRNAVANVIQHLGENTFYDGVLRIVRTEDGTAWTGVPVSAWIGGIWYRKDVLAKA
+ GLEEPKNWQQLLTVAQKLNDPANKKYGIALPTAESVLTEQSFSQFALSNQANVFNAEG
+ QITLDTPEMHRALEYYRSLADNTMPGSNDIMEVKDAFMNGTAPMAMYSTYILPAVIKE
+ GDPQNVGFVVPTEKTSAVYGMLTSLTITTGQKKEETEAAEKFVAFMEQADNIADWVMM
+ SPGAALPVNKAVVNTATWKENAVIKALGDLPYQLIAELPNIQVFGAVGDKNFTRMGDV
+ TGSGVVSSMVHNVTVGKASLSSTIKESQQKLDALVEQR"
+ misc_feature 1240354..1241643
+ /locus_tag="SARI_01285"
+ /note="ABC-type sugar transport system, periplasmic
+ component [Carbohydrate transport and metabolism]; Region:
+ UgpB; COG1653"
+ /db_xref="CDD:224567"
+ misc_feature 1240468..1241334
+ /locus_tag="SARI_01285"
+ /note="Bacterial extracellular solute-binding protein;
+ Region: SBP_bac_1; pfam01547"
+ /db_xref="CDD:216563"
+ gene 1241697..1242548
+ /locus_tag="SARI_01286"
+ CDS 1241697..1242548
+ /locus_tag="SARI_01286"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="similar to AA sequence:REFSEQ:ZP_00725904.1"
+ /note="'KEGG: gvi:glr0748 0.00070 ndhC; NADH dehydrogenase
+ subunit 3 K05574;
+ COG: COG1175 ABC-type sugar transport systems, permease
+ components;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570330.1"
+ /db_xref="GI:161503218"
+ /db_xref="InterPro:IPR000515"
+ /translation="MPFAMLLLAPSLLLLGGLVAWPMISNIEISFLRLPLNPQIASTF
+ VGLSNYISILSDPGFWHSLWMTVWYTALVVAGSTALGLGVAMFFNREFRLRKTARSLV
+ ILSYVTPSISLVFAWKYMFNNGYGIVNYLGVDLLRLYDRAPLWFDNPGSSFVLVVLFA
+ IWRYFPYAFISFLAILQTIDKSLYEAAEMDGANAWQRFCIVTLPAIMPVLATVITLRT
+ IWMFYMFADVYLLTTKVDILGVYLYKTAFAFNDLGKAAAISVVLFIIIFAVILLTRKR
+ VNLNGNK"
+ misc_feature 1241883..1242455
+ /locus_tag="SARI_01286"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature order(1241931..1241936,1241943..1241948,1241961..1241963,
+ 1241988..1241999,1242003..1242032,1242039..1242044,
+ 1242048..1242050,1242177..1242182,1242189..1242191,
+ 1242195..1242197,1242204..1242209,1242213..1242215,
+ 1242225..1242230,1242237..1242239,1242288..1242290,
+ 1242330..1242335,1242342..1242344,1242363..1242374,
+ 1242381..1242386,1242423..1242428)
+ /locus_tag="SARI_01286"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(1242006..1242050,1242363..1242380)
+ /locus_tag="SARI_01286"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(1242048..1242050,1242162..1242164,1242381..1242383,
+ 1242417..1242419,1242426..1242428)
+ /locus_tag="SARI_01286"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(1242240..1242278,1242294..1242299,1242309..1242311)
+ /locus_tag="SARI_01286"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene 1242535..1243377
+ /locus_tag="SARI_01287"
+ CDS 1242535..1243377
+ /locus_tag="SARI_01287"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="similar to AA sequence:REFSEQ:YP_688834.1"
+ /note="'COG: COG0395 ABC-type sugar transport system,
+ permease component;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570331.1"
+ /db_xref="GI:161503219"
+ /db_xref="InterPro:IPR000515"
+ /translation="MATNKRKAGRIGFYCGLIVFLIITLFPFFVMLMTSFKSAKEAIS
+ LHPTLFPQHWTLEHYVDIFNPLIFPFVDYFRNSMVVSVMSSVVAVFLGMLGAYALSRL
+ RFKGRTTINASFYTVYMFSGILLVVPLFKIITALGIYDTEMALLITMVTQTLPTAVFM
+ LKSYFDTIPDEIEEAAMMDGLNRLQIIFRITVPLAMSGLVSVFVYCFMVAWNDYLFAS
+ IFLSSASNFTLPVGLNTLFSTPDYIWGRMMAASLVTALPVVVMYALSERFIKSGLTAG
+ GVKG"
+ misc_feature 1242535..1243371
+ /locus_tag="SARI_01287"
+ /note="ABC-type sugar transport system, permease component
+ [Carbohydrate transport and metabolism]; Region: UgpE;
+ COG0395"
+ /db_xref="CDD:223472"
+ misc_feature 1242796..1243311
+ /locus_tag="SARI_01287"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature order(1242802..1242807,1242814..1242819,1242832..1242834,
+ 1242862..1242873,1242877..1242906,1242913..1242918,
+ 1242922..1242924,1242985..1242990,1242994..1242996,
+ 1243000..1243002,1243009..1243014,1243018..1243020,
+ 1243030..1243035,1243042..1243044,1243093..1243095,
+ 1243135..1243140,1243147..1243149,1243168..1243179,
+ 1243186..1243191,1243228..1243233,1243261..1243266,
+ 1243273..1243278,1243282..1243287,1243294..1243299,
+ 1243306..1243311)
+ /locus_tag="SARI_01287"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(1242880..1242924,1243168..1243185)
+ /locus_tag="SARI_01287"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(1242922..1242924,1242970..1242972,1243186..1243188,
+ 1243222..1243224,1243231..1243233,1243261..1243263)
+ /locus_tag="SARI_01287"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(1243045..1243083,1243099..1243104,1243114..1243116)
+ /locus_tag="SARI_01287"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene 1243406..1244458
+ /locus_tag="SARI_01288"
+ CDS 1243406..1244458
+ /locus_tag="SARI_01288"
+ /inference="protein motif:BlastProDom:IPR011597"
+ /inference="protein motif:HMMPanther:IPR002085"
+ /inference="protein motif:HMMPfam:IPR013149"
+ /inference="protein motif:HMMPfam:IPR013154"
+ /inference="protein motif:superfamily:IPR011032"
+ /inference="similar to AA sequence:INSD:EAY48563.1"
+ /note="'KEGG: cvi:CV2051 6.1e-19 probable zinc-containing
+ alcohol dehydrogenase K00001:K00002;
+ COG: COG1063 Threonine dehydrogenase and related
+ Zn-dependent dehydrogenases;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570332.1"
+ /db_xref="GI:161503220"
+ /db_xref="InterPro:IPR002085"
+ /db_xref="InterPro:IPR011032"
+ /db_xref="InterPro:IPR011597"
+ /db_xref="InterPro:IPR013149"
+ /db_xref="InterPro:IPR013154"
+ /translation="MKKLIATQPRVAALVEYEDRAILANEVKIRVLYGAPKHGTEVVD
+ FRAASPFIDEDFNFEWQMFMPRPEGAPRGIEFGKFQLGNMVVGDIIECGSDVTEYAVG
+ DRVCGYGPLSETVIINAVNNYKLRKMPEGGSWKNAVCYDPAQFAMSGVRDANVRVGDF
+ VVIVGLGAIGQIAVQLAKKAGASVVIGVDPIEHRCDIARRHGADFCFNPGGTDVGMEI
+ KKLTGKQGADVIIETSGYADALQSALRGLAYGGTISYVAFAKPFTAGFNLGREAHFNN
+ AKIVFARACSEPNPDYPRWSRKRIEETCWELLMNGYLDCEEIIDPVVTFASSPESYME
+ YVDRHPEKSIKMGVTF"
+ misc_feature 1243406..1244455
+ /locus_tag="SARI_01288"
+ /note="Threonine dehydrogenase and related Zn-dependent
+ dehydrogenases [Amino acid transport and metabolism /
+ General function prediction only]; Region: Tdh; COG1063"
+ /db_xref="CDD:223991"
+ misc_feature 1243640..1244455
+ /locus_tag="SARI_01288"
+ /note="2-desacetyl-2-hydroxyethyl bacteriochlorophyllide
+ and other MDR family members; Region:
+ 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_;
+ cd08255"
+ /db_xref="CDD:176217"
+ misc_feature order(1243826..1243828,1243838..1243840,1243898..1243915,
+ 1243970..1243975,1243985..1243987,1244039..1244041,
+ 1244102..1244107,1244111..1244113,1244171..1244176,
+ 1244252..1244260)
+ /locus_tag="SARI_01288"
+ /note="putative NAD(P) binding site [chemical binding];
+ other site"
+ /db_xref="CDD:176217"
+ gene 1244477..1245265
+ /locus_tag="SARI_01289"
+ CDS 1244477..1245265
+ /locus_tag="SARI_01289"
+ /inference="protein motif:HMMPfam:IPR012307"
+ /inference="similar to AA sequence:REFSEQ:YP_540594.1"
+ /note="'KEGG: eci:UTI89_C1585 1.9e-130 ycjR; putative
+ transient receptor potential locus K01820;
+ COG: COG1082 Sugar phosphate isomerases/epimerases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570333.1"
+ /db_xref="GI:161503221"
+ /db_xref="InterPro:IPR012307"
+ /translation="MKIGTQNQAFFPENILEKFLYIKEMGFDGFEIDGKLLVNNLAEV
+ KAAIKETGLPVTTACGGYDGWIGDFIEERRLNGLKQIERILEALAEVGGQGIIVPAAW
+ GMFTFRLPPMISPRSLEGDRKMVSDSLRYLDRVAERTGTIVYLEPLNRYQDHMINTLA
+ DARRYIVENDLKHVQIIGDFYHMNIEEDDMAQALHDNRDLLGHIHIADNHRYQPGTGT
+ LNFAALFDQLRKDNYQGYVVYEGRVRAENLAEAYRQSLAWLRTC"
+ misc_feature 1244477..1245262
+ /locus_tag="SARI_01289"
+ /note="Sugar phosphate isomerases/epimerases [Carbohydrate
+ transport and metabolism]; Region: IolE; COG1082"
+ /db_xref="CDD:224007"
+ gene 1245288..1246331
+ /locus_tag="SARI_01290"
+ CDS 1245288..1246331
+ /locus_tag="SARI_01290"
+ /inference="protein motif:HMMPfam:IPR000683"
+ /inference="protein motif:HMMPfam:IPR004104"
+ /inference="similar to AA sequence:REFSEQ:ZP_00730746.1"
+ /note="'KEGG: eco:b1315 7.2e-161 ycjS; predicted
+ oxidoreductase, NADH-binding;
+ COG: COG0673 Predicted dehydrogenases and related
+ proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570334.1"
+ /db_xref="GI:161503222"
+ /db_xref="InterPro:IPR000683"
+ /db_xref="InterPro:IPR004104"
+ /translation="MTSSPLQVAIIGAGQVADKVHASYYCTRDDLELVAVCDSRLSQA
+ QALADKYGSALVWSDPEKMLHDVQPDIVSVCSPNRFHYEHAMMALKAGCHVMCEKPPA
+ MTPDQALEMCNTAHRMGKVMAYDFHHRFALDTQLLREQVMSGVLGEIYVTTARALRRC
+ GVPGWGVFTNKELQGGGPLIDIGIHMLDAAMYVLGFPAVKRVNAHSFQKIGTRKHNGQ
+ FGEWDPTTYTVEDALFGTIEFHNGGILRLETSFALNIPEQSIMNVNFCGDKAGATLFP
+ AQVYTDRDGELVMLLQREKADDNRHFRSMEAFVNHVKGDPVTIADAEQGIIIQQLVAA
+ LYESAETGMCVEL"
+ misc_feature 1245294..1246328
+ /locus_tag="SARI_01290"
+ /note="Predicted dehydrogenases and related proteins
+ [General function prediction only]; Region: MviM; COG0673"
+ /db_xref="CDD:223745"
+ misc_feature 1245309..1245665
+ /locus_tag="SARI_01290"
+ /note="Oxidoreductase family, NAD-binding Rossmann fold;
+ Region: GFO_IDH_MocA; pfam01408"
+ /db_xref="CDD:201778"
+ misc_feature 1245699..1246019
+ /locus_tag="SARI_01290"
+ /note="Oxidoreductase family, C-terminal alpha/beta
+ domain; Region: GFO_IDH_MocA_C; pfam02894"
+ /db_xref="CDD:217272"
+ gene 1246328..1248604
+ /locus_tag="SARI_01291"
+ CDS 1246328..1248604
+ /locus_tag="SARI_01291"
+ /inference="protein motif:Gene3D:IPR012343"
+ /inference="protein motif:HMMPfam:IPR005194"
+ /inference="protein motif:HMMPfam:IPR005195"
+ /inference="protein motif:HMMPfam:IPR005196"
+ /inference="protein motif:superfamily:IPR008928"
+ /inference="protein motif:superfamily:IPR011013"
+ /note="'KEGG: eci:UTI89_C1587 1.7e-301 ycjT; hypothetical
+ transport protein YcjT;
+ COG: COG1554 Trehalose and maltose hydrolases (possible
+ phosphorylases);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570335.1"
+ /db_xref="GI:161503223"
+ /db_xref="InterPro:IPR005194"
+ /db_xref="InterPro:IPR005195"
+ /db_xref="InterPro:IPR005196"
+ /db_xref="InterPro:IPR008928"
+ /db_xref="InterPro:IPR011013"
+ /db_xref="InterPro:IPR012343"
+ /translation="MTKPVMLTESTFCPQNLDKYASLMTTGNGYMGIRASHEEAYTRQ
+ TRGIYLAGLYHRAGKGELNELVNLPDVVGVEIVLNGENFSLLSGAIESWHRELDFATG
+ ELRRALVWQAPGGARFAIESRRFVSAEKLPLFAQEVAITPLDTDAAILISTGIDATIT
+ NHGRQHLDETQVRVFGQQILQGIYTTQDDHNDIAISSFCNIDGEAQRCFTAKERRLLQ
+ HTSVQAKAGQRVTLQKITWIEWTSERQVSRETWGRQLLRKLEACVKQGYEALLAESAE
+ NWRAWWQRSRVQVISTDATDQQALDFALYQLRAMTPTHDERSSIAAKGLTGEGYKGHV
+ FWDTEVFLLPFHLFTEPKIARSLLRYRWHNLPRAREKARRNGWQGALFPWESARSGEE
+ ETPEFAAINIRTGLRQKVASALAEHHLVADIAWAVVNYWHATGDMSFIAHEGMALLLE
+ TAKFWISRAVAVNNRLEIHDVIGPDEYTEHVNNNAFTSYMAYYNVEQALWFARFLNGS
+ DEVFIRRAEYFLEHLWRPEVKQDGVLPQDDSFLSKPVIDLAKYKAKAGTQAILLDYSR
+ AEVNEMQIIKQADVVMLTYMLPDQFSAQECLANLRFYEPRTIHDSSLSKSIHGIVAAR
+ CGETEQGYQFWRDGSQIDLGDNPHSCDDGIHAAATGAIWLGAIQGFAGVSVRHGELHL
+ EPALPENWQTLAFPLRWHDSEMHFTIETAEIRITSTTQVHLWVYGKKISVQGECVLRR
+ HDCITAMSGTDTTKREAE"
+ misc_feature 1246328..1248529
+ /locus_tag="SARI_01291"
+ /note="Trehalose and maltose hydrolases (possible
+ phosphorylases) [Carbohydrate transport and metabolism];
+ Region: ATH1; COG1554"
+ /db_xref="CDD:224471"
+ misc_feature 1246346..1247059
+ /locus_tag="SARI_01291"
+ /note="Glycosyl hydrolase family 65, N-terminal domain;
+ Region: Glyco_hydro_65N; pfam03636"
+ /db_xref="CDD:217652"
+ misc_feature 1247228..1248367
+ /locus_tag="SARI_01291"
+ /note="Glycosyl hydrolase family 65 central catalytic
+ domain; Region: Glyco_hydro_65m; pfam03632"
+ /db_xref="CDD:217648"
+ misc_feature 1248377..1248529
+ /locus_tag="SARI_01291"
+ /note="Glycosyl hydrolase family 65, C-terminal domain;
+ Region: Glyco_hydro_65C; pfam03633"
+ /db_xref="CDD:217649"
+ gene 1248601..1249269
+ /locus_tag="SARI_01292"
+ CDS 1248601..1249269
+ /locus_tag="SARI_01292"
+ /inference="protein motif:FPrintScan:IPR005833"
+ /inference="protein motif:HMMPfam:IPR005834"
+ /inference="protein motif:HMMTigr:IPR006402"
+ /inference="protein motif:HMMTigr:IPR010972"
+ /inference="protein motif:HMMTigr:IPR010976"
+ /inference="similar to AA sequence:INSD:EAY48559.1"
+ /note="'KEGG: eco:b1317 5.3e-78 ycjU, pgmB; putative beta
+ phosphoglucomutase, contains a phophatase-like domain
+ K01838;
+ COG: COG0637 Predicted phosphatase/phosphohexomutase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570336.1"
+ /db_xref="GI:161503224"
+ /db_xref="InterPro:IPR005833"
+ /db_xref="InterPro:IPR005834"
+ /db_xref="InterPro:IPR006402"
+ /db_xref="InterPro:IPR010972"
+ /db_xref="InterPro:IPR010976"
+ /translation="MKQHPQAIIFDLDGVITDTAHLHFLAWRQIADDIGIVIDEAFND
+ NLKGISRGESLRHILQHGGKEGAFGEEARAQLAARKNSLYVESLKQLTPQSVLPGIRP
+ LLVTLRELQIPVALASVSLNAPAILQTLDIRDYFDFCVDAARISRSKPDPEIFLAACE
+ GLGVNPCECIGVEDAQAGIDAINACGMRSVGIGGALRDADLHLPSTEFLTWPRLSAFW
+ QNDK"
+ misc_feature 1248619..1249179
+ /locus_tag="SARI_01292"
+ /note="beta-phosphoglucomutase; Region: bPGM; TIGR01990"
+ /db_xref="CDD:213672"
+ misc_feature 1248886..1249176
+ /locus_tag="SARI_01292"
+ /note="Haloacid dehalogenase-like hydrolases. The haloacid
+ dehalogenase-like (HAD) superfamily includes L-2-haloacid
+ dehalogenase, epoxide hydrolase, phosphoserine
+ phosphatase, phosphomannomutase, phosphoglycolate
+ phosphatase, P-type ATPase, and many others; Region:
+ HAD_like; cd01427"
+ /db_xref="CDD:119389"
+ misc_feature 1248952..1248954
+ /locus_tag="SARI_01292"
+ /note="motif II; other site"
+ /db_xref="CDD:119389"
+ gene 1249280..1250362
+ /locus_tag="SARI_01293"
+ CDS 1249280..1250362
+ /locus_tag="SARI_01293"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMPfam:IPR013611"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="protein motif:superfamily:IPR008995"
+ /inference="similar to AA sequence:REFSEQ:ZP_00712756.1"
+ /note="'KEGG: sth:STH1782 7.6e-102 sugar ABC transportor
+ ATP-binding protein K05816;
+ COG: COG3839 ABC-type sugar transport systems, ATPase
+ components;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570337.1"
+ /db_xref="GI:161503225"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR008995"
+ /db_xref="InterPro:IPR013611"
+ /translation="MAQLSLQHIQKIYDNQVHVVKDFNLEIEDKEFIVFVGPSGCGKS
+ TTLRMIAGLEEISDGNLLIDGKRMNDVPAKSRNIAMVFQNYALYPHMSVYANMAFGLK
+ MQKINPEIIDERVNWAAQILGLRDYLKRKPGALSGGQRQRVALGRAIVREAGVFLMDE
+ PLSNLDAKLRVQMRAEISKLHQKLKTTMIYVTHDQTEAMTMATRIVIMKDGIVQQVGA
+ PKEVYNHPANMFVAGFIGSPAMNFIRGAIDGNQFVTETLKLTIPQETLDLLKTQGYEH
+ KAVTMGIRPEDIHPQGHNENSVSAKISVAELTGAEFMLYTTIGGHELVVRAGAMNDYY
+ AGENITINFDMAKCHFFDAETELAIQ"
+ misc_feature 1249280..1250341
+ /locus_tag="SARI_01293"
+ /note="ABC-type sugar transport systems, ATPase components
+ [Carbohydrate transport and metabolism]; Region: MalK;
+ COG3839"
+ /db_xref="CDD:226359"
+ misc_feature 1249289..1249930
+ /locus_tag="SARI_01293"
+ /note="The N-terminal ATPase domain of the maltose
+ transporter, MalK; Region: ABC_MalK_N; cd03301"
+ /db_xref="CDD:213268"
+ misc_feature 1249388..1249411
+ /locus_tag="SARI_01293"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213268"
+ misc_feature order(1249397..1249402,1249406..1249414,1249526..1249528,
+ 1249754..1249759,1249856..1249858)
+ /locus_tag="SARI_01293"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213268"
+ misc_feature 1249517..1249528
+ /locus_tag="SARI_01293"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213268"
+ misc_feature 1249682..1249711
+ /locus_tag="SARI_01293"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213268"
+ misc_feature 1249742..1249759
+ /locus_tag="SARI_01293"
+ /note="Walker B; other site"
+ /db_xref="CDD:213268"
+ misc_feature 1249766..1249777
+ /locus_tag="SARI_01293"
+ /note="D-loop; other site"
+ /db_xref="CDD:213268"
+ misc_feature 1249844..1249864
+ /locus_tag="SARI_01293"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213268"
+ misc_feature 1250120..1250332
+ /locus_tag="SARI_01293"
+ /note="TOBE domain; Region: TOBE_2; pfam08402"
+ /db_xref="CDD:219823"
+ gene 1250440..1251345
+ /locus_tag="SARI_01294"
+ CDS 1250440..1251345
+ /locus_tag="SARI_01294"
+ /inference="similar to AA sequence:REFSEQ:ZP_00723996.1"
+ /note="'Psort location: extracellular, including cell
+ wall, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570338.1"
+ /db_xref="GI:161503226"
+ /translation="MKTLLSSTALIMCAGMACAQAAENNDWHFNVGAMYEIENVESQS
+ EDMDGLGEPSIYFNASNGPWSIALAYYQEGPVDYSAGNRGTWFDRPELEVRYQFLESA
+ DFNFGLTGGFRNYGYHYVNEEGKDTANMQRWKIQPDWDAKLNDDLHFSGWLAMYQFVN
+ DLSITGYSDSRIETETGLNYTFNETVGFTVNYYLERGFNLAEHRNNGEFSTQEIRAYL
+ PISLGNTTLTPYTRLGLDRWTNWDWQDDPEREGHDFNRLGLLYAYDFQNGLSMTLEYA
+ YEWEDHDEGESDRFHYAGIGVNYAF"
+ misc_feature 1250506..1251342
+ /locus_tag="SARI_01294"
+ /note="Outer membrane protein G (OmpG); Region:
+ Porin_OmpG; pfam09381"
+ /db_xref="CDD:204222"
+ gene complement(1251386..1252396)
+ /locus_tag="SARI_01295"
+ CDS complement(1251386..1252396)
+ /locus_tag="SARI_01295"
+ /inference="protein motif:HMMPfam:IPR000843"
+ /inference="protein motif:HMMPfam:IPR001761"
+ /inference="protein motif:HMMSmart:IPR000843"
+ /inference="protein motif:ScanRegExp:IPR000843"
+ /inference="protein motif:superfamily:IPR010982"
+ /inference="similar to AA sequence:INSD:AAG56482.1"
+ /note="'KEGG: efa:EF1922 3.8e-09 transcriptional
+ regulator, LacI family/carbohydrate kinase, PfkB family
+ protein K00852;
+ COG: COG1609 Transcriptional regulators;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570339.1"
+ /db_xref="GI:161503227"
+ /db_xref="InterPro:IPR000843"
+ /db_xref="InterPro:IPR001761"
+ /db_xref="InterPro:IPR010982"
+ /translation="MPPTIYDIARIAGVSKSTVSRVLNKQTNISPEAREKVLRAIDEL
+ QYQPNKLARALTSSGFDAIMVISTRSAKTTAGNPFFSEVLHAITARAEEEGFDVILQT
+ SRSTEDDLQKCVSKIKHKMIKGIIMLSSPADESFFARLDNYDIPVVVIGKVEGQYQHV
+ YSVDTDNYRDSIVLTDALINNGHQHIACLHAPLDYHVSVDRVNGYKASLEAHLLTVRN
+ EWIIDGGYTHESAIEAARMLLSQNPLPDAVFATDSIKILSLYRVAAEKNISIPQQLAV
+ VGYSNEMLSFILTPPPGGIDIPTRALGEQSCNILFKQIAGKTSPRSITVETRISLTAS
+ LA"
+ misc_feature complement(1251389..1252390)
+ /locus_tag="SARI_01295"
+ /note="Transcriptional regulators [Transcription]; Region:
+ PurR; COG1609"
+ /db_xref="CDD:224525"
+ misc_feature complement(1252226..1252381)
+ /locus_tag="SARI_01295"
+ /note="Helix-turn-helix (HTH) DNA binding domain of the
+ LacI family of transcriptional regulators; Region:
+ HTH_LacI; cd01392"
+ /db_xref="CDD:143331"
+ misc_feature complement(order(1252229..1252234,1252238..1252243,
+ 1252250..1252252,1252259..1252261,1252298..1252300,
+ 1252307..1252312,1252325..1252327,1252334..1252339,
+ 1252343..1252357,1252379..1252381))
+ /locus_tag="SARI_01295"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:143331"
+ misc_feature complement(1252232..1252261)
+ /locus_tag="SARI_01295"
+ /note="domain linker motif; other site"
+ /db_xref="CDD:143331"
+ misc_feature complement(1251410..1252213)
+ /locus_tag="SARI_01295"
+ /note="Ligand-binding domain of uncharacterized
+ transcription regulator ycjW which is a member of the
+ LacI-GalR family repressors; Region:
+ PBP1_ycjW_transcription_regulator_like; cd06294"
+ /db_xref="CDD:107289"
+ misc_feature complement(order(1251602..1251607,1251614..1251616,
+ 1251626..1251628,1251710..1251712,1252034..1252042,
+ 1252049..1252051,1252058..1252060,1252091..1252093,
+ 1252097..1252111,1252130..1252135,1252139..1252144,
+ 1252151..1252159,1252211..1252213))
+ /locus_tag="SARI_01295"
+ /note="putative dimerization interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:107289"
+ misc_feature complement(order(1251506..1251508,1251557..1251559,
+ 1251716..1251718,1251794..1251796,1251902..1251904,
+ 1251944..1251946,1252013..1252015,1252148..1252150,
+ 1252157..1252162))
+ /locus_tag="SARI_01295"
+ /note="putative ligand binding site [chemical binding];
+ other site"
+ /db_xref="CDD:107289"
+ gene 1252547..1253944
+ /locus_tag="SARI_01296"
+ CDS 1252547..1253944
+ /locus_tag="SARI_01296"
+ /inference="protein motif:HMMPfam:IPR007413"
+ /inference="similar to AA sequence:REFSEQ:YP_150468.1"
+ /note="'KEGG: sdy:SDY_1399 5.0e-240 ycjX; putative YcjX;
+ COG: COG3106 Predicted ATPase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570340.1"
+ /db_xref="GI:161503228"
+ /db_xref="InterPro:IPR007413"
+ /translation="MKRLKTELNALVNRGVDRHLRLAVTGLSRSGKTAFITAIVNQLL
+ NVHAGARLPLLSAVREERLLGVKRVPQRDFGIPRFTYDEGILQLYGNPPVWPTPTRGV
+ SEIRLALRYRSNDSLLRHFKDTSTLYLEIVDYPGEWLLDLPMLAQDYLSWSRQMNGLL
+ QGPRAEWSAKWRQLCEGLDPLAPADEKRLAEIAAAWTDYLHQCKSQGLHFIQPGRFVL
+ PGDMAGAPALQFFPWPDVDAYGESALARADKQTNAGMLRERFNYYCEKVVKGFYKNHF
+ LRFDRQIVLVDCLQPLNSGPQAFNDMRLALTQLMQSFHYGQRTLFRRLFSPVIDKLLF
+ AATKADHVTLDQHANMVALLQQLIQDAWQNAAFEGISMDCLGLASVQSTTSGVIEVNG
+ EKIPALRGNRLSDGAPLTVYPGEVPSRLPGQAFWDSQGFQFEAFRPQVMDVDKPLPHI
+ RLDAALEFLIGDKLR"
+ misc_feature 1252547..1253941
+ /locus_tag="SARI_01296"
+ /note="Predicted ATPase [General function prediction
+ only]; Region: COG3106"
+ /db_xref="CDD:225648"
+ gene 1253941..1255002
+ /locus_tag="SARI_01297"
+ CDS 1253941..1255002
+ /locus_tag="SARI_01297"
+ /inference="protein motif:HMMPfam:IPR006507"
+ /inference="protein motif:HMMTigr:IPR006507"
+ /inference="similar to AA sequence:REFSEQ:YP_216664.1"
+ /note="'COG: COG3768 Predicted membrane protein;
+ Psort location: endoplasmic reticulum, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570341.1"
+ /db_xref="GI:161503229"
+ /db_xref="InterPro:IPR006507"
+ /translation="MSEPLKPRIDFAEPLKEESTSTFKAQQTFSEVESRTFSPAAIDE
+ YPEDEGTAEAAVDAALQPKRSLWRKMVLGGLALFGASVVGQGIQWTMNAWQTQDWAAL
+ GGCAAGALIIGAGVGSVITEWRRLWRLRQRAHERDEARELLHSHSVGKGRAYCEKLAQ
+ QAGIDQSHPALQRWYAAIHETQNDREIVGLYAHLVQPVLDAQARREVSRFAAESTLMI
+ AVSPLALVDMAFIAWRNLRLINRIAALYGIELGYYSRLRLFRLVLLNIAFAGASELVR
+ EVGMDWMSQDLAARLSTRAAQGIGAGLLTARLGIKTMELCRPLPWFDDDKPRLGDFRR
+ QLIGQLKETLQKNKPTPEK"
+ misc_feature 1253941..1254966
+ /locus_tag="SARI_01297"
+ /note="hypothetical protein; Provisional; Region:
+ PRK05415"
+ /db_xref="CDD:235449"
+ misc_feature 1254100..1254963
+ /locus_tag="SARI_01297"
+ /note="TIGR01620 family protein; Region: hyp_HI0043"
+ /db_xref="CDD:130681"
+ gene 1255150..1256691
+ /locus_tag="SARI_01298"
+ CDS 1255150..1256691
+ /locus_tag="SARI_01298"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR002078"
+ /inference="protein motif:HMMPfam:IPR002912"
+ /inference="protein motif:HMMSmart:IPR000014"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR002078"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:INSD:"
+ /note="regulates genes involved in the biosynthesis and
+ transport of aromatic amino acids"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional regulator TyrR"
+ /protein_id="YP_001570342.1"
+ /db_xref="GI:161503230"
+ /db_xref="InterPro:IPR000014"
+ /db_xref="InterPro:IPR002078"
+ /db_xref="InterPro:IPR002912"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /translation="MRLEVFCEDRLGLTRELLDLLVLRSIDLRGIEIDPIGRIYLNFA
+ ELEFTAFSRLMAEIRRISGVTDVRTVPWMPSEREHLALSALLEALPEPVLSLDMRSKV
+ EMANPASCQLFAQSQERMRHHTAAQLINGFNFQRWLEGNPQNSHNEHVVINGQNFLME
+ ITPVHLQNENDEYVLTGAVVMLRSTLRMGRQLQNLSAQDVSAFSQIIAVSAKMKHVVE
+ QARKLAMLSAPLLITGDTGTGKDLFAHACHQASPRAAKPYLALNCASIPEDAVESELF
+ GHAPEGKKGFFEQANGGSVLLDEIGEMSPRMQAKLLRFLNDGTFRRVGEDHEIHVDVR
+ VICATQKNLVELVQKGLFREDLYYRLNVLTLNLPPLRDCPQDIMPLTELFVARFADEQ
+ GVPRPKLSADLSSVLTRYGWPGNVRQLKNAIYRALTQLEGYELRPQDILLPDYDAATV
+ AVGEDAMEGSLDDITSRFERSVLTLLYRSYPSTRKLAKRLGVSHTAIANKLREYGLSQ
+ KKGEE"
+ misc_feature 1255150..1256688
+ /locus_tag="SARI_01298"
+ /note="DNA-binding transcriptional regulator TyrR;
+ Provisional; Region: PRK10820"
+ /db_xref="CDD:236769"
+ misc_feature 1255150..1255371
+ /locus_tag="SARI_01298"
+ /note="ACT domains are commonly involved in specifically
+ binding an amino acid or other small ligand leading to
+ regulation of the enzyme; Region: ACT; cl09141"
+ /db_xref="CDD:245020"
+ misc_feature 1255786..1256232
+ /locus_tag="SARI_01298"
+ /note="The AAA+ (ATPases Associated with a wide variety of
+ cellular Activities) superfamily represents an ancient
+ group of ATPases belonging to the ASCE (for additional
+ strand, catalytic E) division of the P-loop NTPase fold.
+ The ASCE division also includes ABC; Region: AAA; cd00009"
+ /db_xref="CDD:99707"
+ misc_feature 1255849..1255872
+ /locus_tag="SARI_01298"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature order(1255852..1255875,1256041..1256043,1256167..1256169)
+ /locus_tag="SARI_01298"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:99707"
+ misc_feature 1256029..1256046
+ /locus_tag="SARI_01298"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature 1256224..1256226
+ /locus_tag="SARI_01298"
+ /note="arginine finger; other site"
+ /db_xref="CDD:99707"
+ gene complement(1256780..1257286)
+ /gene="tpx"
+ /locus_tag="SARI_01299"
+ CDS complement(1256780..1257286)
+ /gene="tpx"
+ /locus_tag="SARI_01299"
+ /inference="protein motif:Gene3D:IPR012335"
+ /inference="protein motif:HMMPfam:IPR013740"
+ /inference="protein motif:ScanRegExp:IPR002065"
+ /inference="protein motif:superfamily:IPR012336"
+ /inference="similar to AA sequence:REFSEQ:YP_216662.1"
+ /note="antioxidant activity; thioredoxin-dependent thiol
+ peroxidase; forms homodimers in solution; shows substrate
+ specificity to alkyl hydroperoxides; periplasmic protein"
+ /codon_start=1
+ /transl_table=11
+ /product="thiol peroxidase"
+ /protein_id="YP_001570343.1"
+ /db_xref="GI:161503231"
+ /db_xref="InterPro:IPR002065"
+ /db_xref="InterPro:IPR012335"
+ /db_xref="InterPro:IPR012336"
+ /db_xref="InterPro:IPR013740"
+ /translation="MSQTVHFQGNPVTVANVIPQAGNKAQAFTLVAKDLSDVSLSQYA
+ GKRKVLNIFPSIDTGVCAASVRKFNQLATEVENTVVLCVSADLPFAQSRFCGAEGLSN
+ VITLSTLRNNEFLKNYGVEITDGPLKGLAARAVIVLDENDNVIFSQLVDEITHEPDYA
+ AALDVLKA"
+ misc_feature complement(1256792..1257229)
+ /gene="tpx"
+ /locus_tag="SARI_01299"
+ /note="Peroxiredoxin (PRX) family, Atypical 2-cys PRX
+ subfamily; composed of PRXs containing peroxidatic and
+ resolving cysteines, similar to the homodimeric thiol
+ specific antioxidant (TSA) protein also known as
+ TRX-dependent thiol peroxidase (Tpx). Tpx is a...; Region:
+ PRX_Atyp2cys; cd03014"
+ /db_xref="CDD:239312"
+ misc_feature complement(order(1256900..1256905,1256960..1256962,
+ 1257008..1257010,1257026..1257031,1257116..1257118,
+ 1257122..1257124))
+ /gene="tpx"
+ /locus_tag="SARI_01299"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:239312"
+ misc_feature complement(order(1256888..1256890,1257104..1257106,
+ 1257113..1257115))
+ /gene="tpx"
+ /locus_tag="SARI_01299"
+ /note="catalytic triad [active]"
+ /db_xref="CDD:239312"
+ misc_feature complement(order(1257002..1257004,1257104..1257106))
+ /gene="tpx"
+ /locus_tag="SARI_01299"
+ /note="peroxidatic and resolving cysteines [active]"
+ /db_xref="CDD:239312"
+ gene 1257402..1258367
+ /locus_tag="SARI_01300"
+ CDS 1257402..1258367
+ /locus_tag="SARI_01300"
+ /inference="protein motif:HMMPanther:IPR001354"
+ /inference="protein motif:HMMPfam:IPR013341"
+ /inference="protein motif:ScanRegExp:IPR001354"
+ /inference="similar to AA sequence:REFSEQ:YP_216661.1"
+ /note="'KEGG: sdy:SDY_1403 4.6e-143 ycjG; putative
+ muconate cycloisomerase I;
+ COG: COG4948 L-alanine-DL-glutamate epimerase and related
+ enzymes of enolase superfamily;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570344.1"
+ /db_xref="GI:161503232"
+ /db_xref="InterPro:IPR001354"
+ /db_xref="InterPro:IPR013341"
+ /translation="MRSVKVYEETWPLHTPFVIARGSRSEAHVVVVELEDEGVKGAGE
+ CTPYPRYGESDASVMAQIMSIVPQLENGLTREALQKLLPAGAARNAVDSALWDLQARQ
+ RQQSLAELLGVTLDPVFTTAQTVVIGTPEQMAASAAALWEKGATLLKIKLDARLISER
+ MVAIRAAAPEATLIVDANESWRPEGLAARCQLLADLNVAMLEQPLPAQDDAALENFIH
+ PLPICADESCHTRSSLKALTGRYDMINIKLDKTGGLTEALALATEAQEQGFGLMLGCM
+ LCTSRAINAALPLMPLVNFADLDGPTWLAVDVEPALRFTTGQLHL"
+ misc_feature 1257402..1258364
+ /locus_tag="SARI_01300"
+ /note="L-Ala-D/L-Glu epimerase; Provisional; Region:
+ PRK15129"
+ /db_xref="CDD:185083"
+ misc_feature 1257408..1258313
+ /locus_tag="SARI_01300"
+ /note="L-Ala-D/L-Glu epimerase catalyzes the epimerization
+ of L-Ala-D/L-Glu and other dipeptides. The genomic context
+ and the substrate specificity of characterized members of
+ this family from E.coli and B.subtilis indicates a
+ possible role in the metabolism of...; Region:
+ L-Ala-DL-Glu_epimerase; cd03319"
+ /db_xref="CDD:239435"
+ misc_feature order(1257465..1257467,1257771..1257773,1257846..1257848,
+ 1257852..1257854,1257927..1257929,1258005..1258007,
+ 1258074..1258076,1258224..1258226,1258230..1258232,
+ 1258290..1258292,1258296..1258298)
+ /locus_tag="SARI_01300"
+ /note="active site"
+ /db_xref="CDD:239435"
+ gene complement(1258342..1259070)
+ /locus_tag="SARI_01301"
+ CDS complement(1258342..1259070)
+ /locus_tag="SARI_01301"
+ /inference="protein motif:HMMPfam:IPR000834"
+ /inference="similar to AA sequence:REFSEQ:YP_150473.1"
+ /note="'COG: COG2866 Predicted carboxypeptidase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="murein peptide amidase A"
+ /protein_id="YP_001570345.1"
+ /db_xref="GI:161503233"
+ /db_xref="InterPro:IPR000834"
+ /translation="MIVTRPRAERGVFPPGTEHYGRSLLGAPLIWFPAPAADRESGLI
+ LAGTHGDEMSSVVTLSCALRTLNPSLRRHHVVLAVNPDGCQLGLRANANGIDLNRNFP
+ AANWKAGETVYRWNSRANERDVVLLTGERPGSEPETQALCQLIHRLQPAWVVSFHDPL
+ ACIEDPRRSELGEWLAQAFALPLVTSVGYETPGSFGSWCADLNLHCITAEFPPISADE
+ ASEKYLTAMSNLLRWQPKDGVDPS"
+ misc_feature complement(1258345..>1259067)
+ /locus_tag="SARI_01301"
+ /note="Predicted carboxypeptidase [Amino acid transport
+ and metabolism]; Region: COG2866"
+ /db_xref="CDD:225421"
+ misc_feature complement(1258372..1258947)
+ /locus_tag="SARI_01301"
+ /note="Peptidase M14-like domain of Escherichia coli
+ Murein Peptide Amidase A and related proteins; Region:
+ M14_MpaA_like; cd06904"
+ /db_xref="CDD:133114"
+ misc_feature complement(order(1258441..1258443,1258582..1258584,
+ 1258597..1258602,1258774..1258779,1258804..1258806,
+ 1258915..1258917,1258924..1258926))
+ /locus_tag="SARI_01301"
+ /note="putative active site [active]"
+ /db_xref="CDD:133114"
+ misc_feature complement(order(1258600..1258602,1258915..1258917,
+ 1258924..1258926))
+ /locus_tag="SARI_01301"
+ /note="Zn binding site [ion binding]; other site"
+ /db_xref="CDD:133114"
+ gene 1259394..1260206
+ /locus_tag="SARI_01302"
+ CDS 1259394..1260206
+ /locus_tag="SARI_01302"
+ /inference="protein motif:HMMPfam:IPR003558"
+ /inference="protein motif:superfamily:IPR008997"
+ /inference="similar to AA sequence:INSD:AAU88262.1"
+ /note="'COG: NOG34243 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570346.1"
+ /db_xref="GI:161503234"
+ /db_xref="InterPro:IPR003558"
+ /db_xref="InterPro:IPR008997"
+ /translation="MKKCSWLIIIATLTGCSSSPPLVGGNEFYRIFPSPGGNGPVPPT
+ PEEPGLPIPGPGGVNRQTISSNAPLPVPKDNPSVSIMSMSGAVLTVWGRHRNSWLWGY
+ TPWDSNSFGELRNWKIIPGKTPGTVRFVNQGTGTCMTWGVGISGDGGFIHTTCDPRSA
+ VFDFHLIPTLNGNVFIKSVDLNRCIRARFLDRTASSPYAFEILQAECPKPGEKNIELQ
+ WSISEPLRPALAAISKPEIRPAPPSLPLADGSIINNSDSNNISATQIQPVIY"
+ misc_feature 1259625..1260083
+ /locus_tag="SARI_01302"
+ /note="Cytolethal distending toxin A/C family; Region:
+ CDtoxinA; pfam03498"
+ /db_xref="CDD:112322"
+ misc_feature 1259739..>1259948
+ /locus_tag="SARI_01302"
+ /note="Ricin-type beta-trefoil; Carbohydrate-binding
+ domain formed from presumed gene triplication. The domain
+ is found in a variety of molecules serving diverse
+ functions such as enzymatic activity, inhibitory toxicity
+ and signal transduction. Highly specific...; Region:
+ RICIN; cl15820"
+ /db_xref="CDD:247085"
+ gene 1260643..1261050
+ /locus_tag="SARI_01303"
+ CDS 1260643..1261050
+ /locus_tag="SARI_01303"
+ /inference="protein motif:HMMPfam:IPR005135"
+ /inference="similar to AA sequence:INSD:AAD10622.1"
+ /note="'COG: NOG09971 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570347.1"
+ /db_xref="GI:161503235"
+ /db_xref="InterPro:IPR005135"
+ /translation="MGIRIGSDAFFTIHALANRGVDAPAVVNSVFEFFRNSTRPDMQA
+ TNWMIAGDFNRNPDNLRMAIETPVRNNTVILAPSDPTQRSGGILDYAVVGNAIAFIPP
+ VLRAGLLFGERATQISSDHYPVGIFLPPPGEPR"
+ misc_feature <1260643..1261017
+ /locus_tag="SARI_01303"
+ /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
+ superfamily; Region: EEP; cl00490"
+ /db_xref="CDD:241900"
+ misc_feature order(1260682..1260684,1260796..1260798,1260802..1260804,
+ 1260907..1260909,1261000..1261005)
+ /locus_tag="SARI_01303"
+ /note="putative catalytic site [active]"
+ /db_xref="CDD:197306"
+ misc_feature order(1260682..1260684,1260802..1260804,1261003..1261005)
+ /locus_tag="SARI_01303"
+ /note="putative phosphate binding site [ion binding];
+ other site"
+ /db_xref="CDD:197306"
+ misc_feature 1261000..1261002
+ /locus_tag="SARI_01303"
+ /note="putative metal binding site [ion binding]; other
+ site"
+ /db_xref="CDD:197306"
+ gene 1261047..1261622
+ /locus_tag="SARI_01304"
+ CDS 1261047..1261622
+ /locus_tag="SARI_01304"
+ /inference="protein motif:HMMPfam:IPR003558"
+ /inference="protein motif:superfamily:IPR008997"
+ /inference="similar to AA sequence:INSD:CAD48851.1"
+ /note="'Psort location: extracellular, including cell
+ wall, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570348.1"
+ /db_xref="GI:161503236"
+ /db_xref="InterPro:IPR003558"
+ /db_xref="InterPro:IPR008997"
+ /translation="MKKNIIMLFFFTSILTGCGSSVNNERLLSLNPGEDISGAENGSL
+ FSIRNIQSGFMITNILDQQGREQSGWELIQQETPIEVLATTPGGWIQFRDPITRQCLN
+ AINGVALTKGTCDLKNRESLFVLIPSTTGAVQIQSVNSKTCVIDQDNTDHFLFGRCVA
+ DIQNPQQVVHEKNLWMLNPPVTASSMAPINI"
+ misc_feature 1261176..1261601
+ /locus_tag="SARI_01304"
+ /note="Cytolethal distending toxin A/C family; Region:
+ CDtoxinA; pfam03498"
+ /db_xref="CDD:112322"
+ gene complement(1262047..1262232)
+ /locus_tag="SARI_01305"
+ CDS complement(1262047..1262232)
+ /locus_tag="SARI_01305"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570349.1"
+ /db_xref="GI:161503237"
+ /translation="MPHRSSLKKKFIFYQDNEIKGFISSCAYTVTTLWDNHYTIKKAA
+ QIFIPLGYFLTSFIPLG"
+ gene 1262311..1263837
+ /locus_tag="SARI_01306"
+ CDS 1262311..1263837
+ /locus_tag="SARI_01306"
+ /inference="protein motif:HMMPfam:IPR000914"
+ /inference="similar to AA sequence:REFSEQ:NP_460637.1"
+ /note="'KEGG: shn:Shewana3_2650 1.7e-22 acetate kinase
+ K00925;
+ COG: COG4166 ABC-type oligopeptide transport system,
+ periplasmic component;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570350.1"
+ /db_xref="GI:161503238"
+ /db_xref="InterPro:IPR000914"
+ /translation="MLAEKQELVRHIKDEPASLDPAKAVGLPEIQVIRDLFEGLVNQN
+ EKGEIIPGVATQWKSSDNRIWTFTLRNNAQWADGTPVTAQDFVYSWQRLVDPKTFSPF
+ AWFAALAGITNAQAIIDGKITPDQLGVSAVDAHTLRIQLDKPLPWFASLTANFAFYPV
+ QKANIESGKDWTKPGKLIGNGAYVLKERIVNEKLVVVPNTHYWDNAKTVLQKVTFLPI
+ NQESAATKRYLAGDIDITESFPKNMYKKLLKDIPGQVYTPPQLGTYYYAFNTQKGPTA
+ DSRVRLALSMTIDRRLMAEKILGTGEKPAWHFTPDVTAGFTPDPSPFEQMSQEELNAQ
+ AKTLLRAAGYDSQKPLKLTLLYNTSENHQKIAIAVASMWKKNLGVDVKLQNQEWKTYI
+ DSRNSGNFDVIRASWVGDYNEPSTFLSLLTSTHTGNISRFANPAYDKILTQATMENTA
+ EARNADYNAAEKILTEQAPIAPIYQYTNGRLIKPWVKGYPITNPEDVAYSRTMYILKH
+ "
+ misc_feature 1262314..1263834
+ /locus_tag="SARI_01306"
+ /note="oligopeptide ABC transporter substrate-binding
+ protein OppA; Provisional; Region: PRK15104"
+ /db_xref="CDD:185059"
+ misc_feature 1262326..1263825
+ /locus_tag="SARI_01306"
+ /note="The substrate-binding component of an ABC-type
+ oligopetide import system contains the type 2 periplasmic
+ binding fold; Region: PBP2_OppA; cd08504"
+ /db_xref="CDD:173869"
+ misc_feature order(1262398..1262400,1263019..1263021,1263088..1263090,
+ 1263472..1263474,1263520..1263522,1263526..1263540,
+ 1263736..1263738)
+ /locus_tag="SARI_01306"
+ /note="peptide binding site [polypeptide binding]; other
+ site"
+ /db_xref="CDD:173869"
+ gene complement(1264184..1264357)
+ /locus_tag="SARI_01308"
+ CDS complement(1264184..1264357)
+ /locus_tag="SARI_01308"
+ /inference="protein motif:HMMPanther:IPR002347"
+ /inference="similar to AA sequence:REFSEQ:NP_460633.1"
+ /note="'KEGG: eco:b4249 3.9e-09 yjgI; predicted
+ oxidoreductase with NAD(P)-binding Rossmann-fold domain;
+ COG: COG1028 Dehydrogenases with different specificities
+ (related to short-chain alcohol dehydrogenases);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570351.1"
+ /db_xref="GI:161503240"
+ /db_xref="InterPro:IPR002347"
+ /translation="MGTRGIAIQTNSADRDAVINLIRKYGPLDNLVVNAGIAIFGDAL
+ EQDSYAFPYSIGQ"
+ misc_feature complement(<1264217..1264354)
+ /locus_tag="SARI_01308"
+ /note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
+ NADB_Rossmann; cl09931"
+ /db_xref="CDD:245206"
+ gene 1264220..1264405
+ /locus_tag="SARI_01307"
+ CDS 1264220..1264405
+ /locus_tag="SARI_01307"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570352.1"
+ /db_xref="GI:161503239"
+ /translation="MFKRITEDSDASVNHQIIQRPIFTYEVNDGIAIGAICLDGDASG
+ SHRQFFCGFTLSGVAEN"
+ gene 1264426..1264662
+ /locus_tag="SARI_01309"
+ CDS 1264426..1264662
+ /locus_tag="SARI_01309"
+ /inference="protein motif:HMMPfam:IPR010305"
+ /inference="similar to AA sequence:REFSEQ:YP_150479.1"
+ /note="'COG: NOG31342 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570353.2"
+ /db_xref="GI:448236221"
+ /db_xref="InterPro:IPR010305"
+ /translation="MQKYILTTLLRLSALILTGCTTTYTMTTRTGEVIETQGKPEVDA
+ TSGMTKYADAYGYHRIVSTSEIVLTTEGASKLEW"
+ misc_feature 1264516..1264641
+ /locus_tag="SARI_01309"
+ /note="Bacterial protein of unknown function (DUF903);
+ Region: DUF903; pfam06004"
+ /db_xref="CDD:203370"
+ gene complement(1264944..1265801)
+ /locus_tag="SARI_01310"
+ CDS complement(1264944..1265801)
+ /locus_tag="SARI_01310"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR000005"
+ /inference="protein motif:HMMPfam:IPR010499"
+ /inference="protein motif:HMMSmart:IPR000005"
+ /inference="protein motif:ScanRegExp:IPR000005"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="protein motif:superfamily:IPR011256"
+ /inference="similar to AA sequence:INSD:AAL20588.1"
+ /note="'KEGG: bcz:BCZK3497 9.7e-08 adaA; transcriptional
+ regulator, AraC family K00567;
+ COG: COG2207 AraC-type DNA-binding domain-containing
+ proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570354.1"
+ /db_xref="GI:161503242"
+ /db_xref="InterPro:IPR000005"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR010499"
+ /db_xref="InterPro:IPR011256"
+ /db_xref="InterPro:IPR012287"
+ /translation="MTMKKAIITSVLEQIEKNLEEKIDIEKLVVITGYSRRSLQDFFK
+ EKCGVSIGKYIRQRKLSRSATLLKLTSQSVTDIAFRMGFDSVQSYSREFKKTFGVNPK
+ NYRKADFWDLRNIRPPYWLDNDEHYHFDICQLTSKEIFGFQTSHQFSTNDLPKKASPI
+ KWKMIHETLRTWNESVYCLSSFKPDNAKDQVIAVNSFFGIECNSVDGDRIPMSRVIKA
+ GKYAKFRFVGHMEKYQQFSNTIYMCVLPKLNLIRREGEDIEYFHLASVQKQQNNESIV
+ ELYYYVPVL"
+ misc_feature complement(1264950..1265795)
+ /locus_tag="SARI_01310"
+ /note="right oriC-binding transcriptional activator;
+ Provisional; Region: PRK15121"
+ /db_xref="CDD:185076"
+ misc_feature complement(1265484..1265594)
+ /locus_tag="SARI_01310"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ misc_feature complement(1264947..1265423)
+ /locus_tag="SARI_01310"
+ /note="GyrI-like small molecule binding domain; Region:
+ GyrI-like; pfam06445"
+ /db_xref="CDD:219032"
+ gene complement(1266032..1266175)
+ /locus_tag="SARI_01311"
+ CDS complement(1266032..1266175)
+ /locus_tag="SARI_01311"
+ /note="'Psort location: cytoskeletal, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570355.1"
+ /db_xref="GI:161503243"
+ /translation="MALVFATDSTETTDAQIANANKDLLKYKTIPFYQIIRKYYKIYN
+ LTD"
+ gene 1266222..1266938
+ /locus_tag="SARI_01312"
+ CDS 1266222..1266938
+ /locus_tag="SARI_01312"
+ /inference="similar to AA sequence:REFSEQ:YP_216651.1"
+ /note="'COG: NOG24375 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570356.1"
+ /db_xref="GI:161503244"
+ /translation="MATTNAKKIEVSGELTTGSTLQIADVFIVDEDGDVLSLDKMNNA
+ DDIKWYLVDNEAADPSGTPAATGKAFTIPADAGGKKIKIVYRIKTATGTPDSAFLPTT
+ ILLTSASSGVGGDSAADGTIANKLRSVTINVVNESGKPTDELNGTNNANTPVVGGTLE
+ AVLECATTAAAECEVSNYNFTWQMADAATPDMFTELNNTNAEKHKYIIKGTEQNKLFR
+ VHVTPKTTKTTPENKRAIRR"
+ gene 1267013..1268995
+ /locus_tag="SARI_01313"
+ CDS 1267013..1268995
+ /locus_tag="SARI_01313"
+ /note="'KEGG: sha:SH0507 0.0094 hypothetical protein
+ K00567;
+ COG: NOG08628 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570357.1"
+ /db_xref="GI:161503245"
+ /translation="MVFSKKPITKYITWAIITSQISLPVIADSDNEILSWIAGTASSI
+ SPHLQEGTLEDYAKGKIKALPGQAANQLVNEGMKSAFPEIIFRGGVNLEDGAKYRSSE
+ FDMFIPVQETTSSLLFGQLGFRDHDSSSFDGRTFANVGMGYRQEVNGWLLGVNTFLDA
+ DIRYSHLRGGIGGEVYKESLAFSGNYYFPLTGWRTSAAHEFHDERPAYGFDLRTKGTL
+ PDFPWFSGELTYEQYYGDKVDLLGNGTLSRNPRAAGAALVWNPVPLLEVRAGYRDAGN
+ GGSQAEGGLRVNYSFGTPLHEQLDYRNVGAPSNTTNRRAFVDRNYDIVMAYREQASKI
+ RITAMPVSGLSGTLVTLMATIDSRYPIEKVEWSGDAELIAGLQLQGSLGSGLILPQLP
+ LTATDGQEYSLYLTVTDSRGTRVTSERIPVRVTQDETSFRSWINIINDDAQVEDGNFV
+ ISTPLPAGEEGKVIEWHYVRERSEEEWASLKPRNIKYQSDTPGLSFKALGGTERDGHW
+ VERVLVTHVGDDARSFKLHIEASGPDDKHPVKGSVLLQAQSDSIAQKVTSVEVLFTPG
+ NDEANGSVTAPVVGTEMRARTLCINNTDCTDAFNYQWEISDEMKSWKSVPGATKATWL
+ LPYSLNGESLQNKYIRVRIISDKENAESNNATSAAN"
+ misc_feature 1267115..1267975
+ /locus_tag="SARI_01313"
+ /note="Protein of unknown function (DUF3442); Region:
+ DUF3442; pfam11924"
+ /db_xref="CDD:221317"
+ gene 1269022..1269846
+ /locus_tag="SARI_01314"
+ CDS 1269022..1269846
+ /locus_tag="SARI_01314"
+ /inference="similar to AA sequence:INSD:CAD01662.1"
+ /note="'COG: NOG25390 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570358.2"
+ /db_xref="GI:448236222"
+ /translation="MTKYNFIIYSLLLAVVPISVSADSSTTSAAPVGRLSPPTAPSVG
+ HRPPKNLSGVELTFNGFVFSIFSYTPFPGMTLKRESIHRAPDPDNNYQAAETYTVVCT
+ YYQVNKDNSQHILKRESPCQYNFNIKKEHSGSRIKLEVYNETDITSASGYMPVPSVSE
+ PHYIETQPISNTPSPDLTLINIDNAVLSPGESATITTLVKDVDGNPINDVMINVATAH
+ QNGNGLWDIGPVKKGVGPGEYTQVITYLGNHSETLGVEYSYLGDFFKKYLPIIGRL"
+ gene 1270191..1270475
+ /locus_tag="SARI_01315"
+ CDS 1270191..1270475
+ /locus_tag="SARI_01315"
+ /inference="similar to AA sequence:REFSEQ:NP_455837.1"
+ /note="'KEGG: mxa:MXAN_6496 0.0018 tpx; THIol peroxidase
+ K00435;
+ COG: COG2077 Peroxiredoxin;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570359.1"
+ /db_xref="GI:161503247"
+ /translation="MQVKEYSDRLKSAGSYSNWAEYVLSISRARFICDHDIHPGIIFV
+ SDFTCRQFLDNSGLKINELNIFSRALIECDENNVVTRAIVPRDITHIPVC"
+ misc_feature <1270194..1270469
+ /locus_tag="SARI_01315"
+ /note="Protein Disulfide Oxidoreductases and Other
+ Proteins with a Thioredoxin fold; Region:
+ Thioredoxin_like; cl00388"
+ /db_xref="CDD:241832"
+ gene complement(1270541..1270945)
+ /locus_tag="SARI_01316"
+ CDS complement(1270541..1270945)
+ /locus_tag="SARI_01316"
+ /inference="protein motif:superfamily:IPR011008"
+ /inference="similar to AA sequence:REFSEQ:YP_216649.1"
+ /note="'COG: NOG18520 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570360.1"
+ /db_xref="GI:161503248"
+ /db_xref="InterPro:IPR011008"
+ /translation="MSLFLTSFIFEKKEYDEEFYQLDGWIERYTQSIDGYIGMESYTD
+ AASGRMINNYYWQTRESMELLINNLQHQQAKSQSHNGFPVTRRLLQKFMGVITLTCPI
+ RWHHFQFLMALCNSMNLPFGYRCAFAVQGRRI"
+ gene complement(1270973..1271650)
+ /locus_tag="SARI_01317"
+ CDS complement(1270973..1271650)
+ /locus_tag="SARI_01317"
+ /inference="protein motif:HMMPfam:IPR005146"
+ /inference="similar to AA sequence:REFSEQ:YP_150485.1"
+ /note="'COG: COG3382 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570361.1"
+ /db_xref="GI:161503249"
+ /db_xref="InterPro:IPR005146"
+ /translation="MLPSISPELACIAPGFRALSINVIAAPVRDAQVGEIALKEACQA
+ VLNGQPAWAQAHIDAWNAVFKAFGAKPKRTPCSAEALRKRVLKDGTMAALDPVVDLYN
+ AVSLRYAVPVGGENSAAYYGSPRLVFADGSETFDTLKEGHPVTESPEPGEVIWRDDRG
+ VTCRRWNWRQGVRTRLSASDKTMWFILESLPEMPVDELYAAGNMLTDGLEKMMPGLRF
+ ESTLMDV"
+ misc_feature complement(1270985..1271650)
+ /locus_tag="SARI_01317"
+ /note="Solo B3/4 domain (OB-fold DNA/RNA-binding) of
+ Phe-aaRS-beta [General function prediction only]; Region:
+ COG3382"
+ /db_xref="CDD:225917"
+ misc_feature complement(<1271093..1271431)
+ /locus_tag="SARI_01317"
+ /note="B3/4 domain; Region: B3_4; pfam03483"
+ /db_xref="CDD:202662"
+ gene 1271703..1272305
+ /locus_tag="SARI_01318"
+ CDS 1271703..1272305
+ /locus_tag="SARI_01318"
+ /inference="protein motif:HMMPfam:IPR001387"
+ /inference="protein motif:HMMPfam:IPR013096"
+ /inference="protein motif:HMMSmart:IPR001387"
+ /inference="protein motif:superfamily:IPR011051"
+ /inference="similar to AA sequence:INSD:AAV77174.1"
+ /note="'KEGG: psp:PSPPH_2917 7.1e-07 DNA-binding protein
+ K00517;
+ COG: COG1396 Predicted transcriptional regulators;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570362.1"
+ /db_xref="GI:161503250"
+ /db_xref="InterPro:IPR001387"
+ /db_xref="InterPro:IPR011051"
+ /db_xref="InterPro:IPR013096"
+ /translation="MTKKVNLPTAAGTDVRTINEAVSQRIKQFRRQKKISLDELSRLS
+ GVSKGMLVEIEGCKANPSIALLCKIAAAMGVSVADFVNVASEPIVHLIDRDAIPVLWR
+ GEKGGSAKLMAGTSGPDMLELWQWIMHPGEKFESAGHPADTCELLFVNQGTLTLTVDG
+ RRFIIREGCSAVARTDMSHAYFNDTNEVIEFTMTVNEKSR"
+ misc_feature 1271769..1271942
+ /locus_tag="SARI_01318"
+ /note="Helix-turn-helix XRE-family like proteins.
+ Prokaryotic DNA binding proteins belonging to the
+ xenobiotic response element family of transcriptional
+ regulators; Region: HTH_XRE; cd00093"
+ /db_xref="CDD:238045"
+ misc_feature order(1271781..1271783,1271793..1271795,1271868..1271870)
+ /locus_tag="SARI_01318"
+ /note="non-specific DNA binding site [nucleotide binding];
+ other site"
+ /db_xref="CDD:238045"
+ misc_feature order(1271790..1271792,1271865..1271867)
+ /locus_tag="SARI_01318"
+ /note="salt bridge; other site"
+ /db_xref="CDD:238045"
+ misc_feature order(1271811..1271816,1271847..1271849,1271856..1271858,
+ 1271868..1271873)
+ /locus_tag="SARI_01318"
+ /note="sequence-specific DNA binding site [nucleotide
+ binding]; other site"
+ /db_xref="CDD:238045"
+ misc_feature 1272078..1272287
+ /locus_tag="SARI_01318"
+ /note="Cupin domain; Region: Cupin_2; pfam07883"
+ /db_xref="CDD:219618"
+ gene complement(1272389..1273420)
+ /locus_tag="SARI_01319"
+ CDS complement(1272389..1273420)
+ /locus_tag="SARI_01319"
+ /inference="protein motif:HMMPfam:IPR006685"
+ /inference="protein motif:ScanRegExp:IPR006686"
+ /inference="protein motif:superfamily:IPR010920"
+ /inference="protein motif:superfamily:IPR011014"
+ /inference="protein motif:superfamily:IPR011066"
+ /inference="similar to AA sequence:INSD:CAD01667.1"
+ /note="'COG: COG0668 Small-conductance mechanosensitive
+ channel;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570363.2"
+ /db_xref="GI:448236223"
+ /db_xref="InterPro:IPR006685"
+ /db_xref="InterPro:IPR006686"
+ /db_xref="InterPro:IPR010920"
+ /db_xref="InterPro:IPR011014"
+ /db_xref="InterPro:IPR011066"
+ /translation="MFTDFFLKNAFNLAILFSCGTALLIVRLWLSRNVQWKKGFTFHA
+ AQFFIYAIIIGTIGSILNNAIEDYNLRFISSGVIDFICTSLIAVILTIKLFLLINQFE
+ KAQVNKGRDVTSTRILARVIKITIIVAIILLYGEHFGMSLSGLLTFGGIGGIAVGMAG
+ KDVLSNFFSGIMLYFDRPFSIGDWIRSPDRNIEGTVAEIGWRMTRINTFDHRPLYVPN
+ SVFSSISVENPGRMTNRRIKTVIGLRYEDAGKISIIVDAIRNMLQAHSDIDQKQTLLV
+ YFNEFADSSLNIMVYCFTKTTVWQQWLAVQQDVYLKIIAIVQENGADFAFPSQTLYID
+ DPDAAPAIK"
+ misc_feature complement(1272392..1273234)
+ /locus_tag="SARI_01319"
+ /note="Small-conductance mechanosensitive channel [Cell
+ envelope biogenesis, outer membrane]; Region: MscS;
+ COG0668"
+ /db_xref="CDD:223740"
+ misc_feature complement(1272449..1273027)
+ /locus_tag="SARI_01319"
+ /note="Mechanosensitive ion channel; Region: MS_channel;
+ pfam00924"
+ /db_xref="CDD:201506"
+ gene 1273659..1273919
+ /locus_tag="SARI_01320"
+ CDS 1273659..1273919
+ /locus_tag="SARI_01320"
+ /inference="similar to AA sequence:INSD:AAL20580.1"
+ /note="'COG: NOG14120 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570364.1"
+ /db_xref="GI:161503252"
+ /translation="MIMVKLKSAKGKKFLLCLLAVFIVAASVVTRATIGGVIEQYHIP
+ LSEWTSSMYAIQSAMICVYSLVFTILLAIPLGIYFFGGDEQH"
+ misc_feature 1273659..1273910
+ /locus_tag="SARI_01320"
+ /note="Protein of unknown function (DUF2534); Region:
+ DUF2534; pfam10749"
+ /db_xref="CDD:119269"
+ gene complement(1273963..1274910)
+ /locus_tag="SARI_01321"
+ CDS complement(1273963..1274910)
+ /locus_tag="SARI_01321"
+ /inference="protein motif:Gene3D:IPR006016"
+ /inference="protein motif:HMMPfam:IPR006016"
+ /inference="similar to AA sequence:INSD:AAV77177.1"
+ /note="with UspC and UspD is involved in resistance to UV
+ irradiation"
+ /codon_start=1
+ /transl_table=11
+ /product="universal stress protein UspE"
+ /protein_id="YP_001570365.1"
+ /db_xref="GI:161503253"
+ /db_xref="InterPro:IPR006016"
+ /translation="MAKYQNMLVVIDPNQDDQPALRRAVYLHQRIGGKIKAFLPIYDF
+ SYEMTTLLSPDERTAMRQGVISQRTAWIREQAKYYLEAGVPIEIKVVWHNRPFEAIIQ
+ EVIASDHDLVLKMAHQHDRLEAVIFTPTDWHLLRKCPSPVWMVKDQPWPEGGKALVAV
+ NLASEEPYHNALNEKLVKETLQLAEQVNHTEVHLVGAYPVTPINIAIELPEFDPSVYN
+ DAIRGQHLLAMKSLRQKFSIDEKVTHVEKGLPEEVIPDLAEHLQAGIVVLGTIGRTGL
+ SAAFLGNTAEQVIDHLRCDLLVIKPDEYQTPVELDDEDD"
+ misc_feature complement(1273993..1274907)
+ /locus_tag="SARI_01321"
+ /note="universal stress protein UspE; Provisional; Region:
+ PRK11175"
+ /db_xref="CDD:236871"
+ misc_feature complement(1274476..1274895)
+ /locus_tag="SARI_01321"
+ /note="Usp: Universal stress protein family. The universal
+ stress protein Usp is a small cytoplasmic bacterial
+ protein whose expression is enhanced when the cell is
+ exposed to stress agents. Usp enhances the rate of cell
+ survival during prolonged exposure to...; Region:
+ USP_Like; cd00293"
+ /db_xref="CDD:238182"
+ misc_feature complement(order(1274518..1274529,1274557..1274562,
+ 1274566..1274571,1274791..1274793,1274875..1274883))
+ /locus_tag="SARI_01321"
+ /note="Ligand Binding Site [chemical binding]; other site"
+ /db_xref="CDD:238182"
+ misc_feature complement(1274014..1274442)
+ /locus_tag="SARI_01321"
+ /note="Usp: Universal stress protein family. The universal
+ stress protein Usp is a small cytoplasmic bacterial
+ protein whose expression is enhanced when the cell is
+ exposed to stress agents. Usp enhances the rate of cell
+ survival during prolonged exposure to...; Region:
+ USP_Like; cd00293"
+ /db_xref="CDD:238182"
+ misc_feature complement(order(1274056..1274067,1274095..1274100,
+ 1274104..1274109,1274293..1274295,1274428..1274436))
+ /locus_tag="SARI_01321"
+ /note="Ligand Binding Site [chemical binding]; other site"
+ /db_xref="CDD:238182"
+ gene complement(1275065..1275817)
+ /locus_tag="SARI_01322"
+ CDS complement(1275065..1275817)
+ /locus_tag="SARI_01322"
+ /inference="protein motif:FPrintScan:IPR001808"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000595"
+ /inference="protein motif:HMMPfam:IPR001808"
+ /inference="protein motif:HMMSmart:IPR000595"
+ /inference="protein motif:HMMSmart:IPR001808"
+ /inference="protein motif:ScanRegExp:IPR001808"
+ /inference="protein motif:superfamily:IPR000595"
+ /inference="similar to AA sequence:REFSEQ:YP_216643.1"
+ /note="Global transcription factor that controls the
+ expression of over 100 target genes in response to anoxia"
+ /codon_start=1
+ /transl_table=11
+ /product="fumarate/nitrate reduction transcriptional
+ regulator"
+ /protein_id="YP_001570366.2"
+ /db_xref="GI:448236224"
+ /db_xref="InterPro:IPR000595"
+ /db_xref="InterPro:IPR001808"
+ /db_xref="InterPro:IPR011991"
+ /translation="MIPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDN
+ IIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFD
+ AIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILL
+ LSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRF
+ QKSGMLAVKGKYITIENSDALAALAGHTRIVA"
+ misc_feature complement(1275083..1275787)
+ /locus_tag="SARI_01322"
+ /note="fumarate/nitrate reduction transcriptional
+ regulator; Provisional; Region: PRK11161"
+ /db_xref="CDD:183004"
+ misc_feature complement(1275386..1275718)
+ /locus_tag="SARI_01322"
+ /note="effector domain of the CAP family of transcription
+ factors; members include CAP (or cAMP receptor protein
+ (CRP)), which binds cAMP, FNR (fumarate and nitrate
+ reduction), which uses an iron-sulfur cluster to sense
+ oxygen) and CooA, a heme containing CO...; Region: CAP_ED;
+ cd00038"
+ /db_xref="CDD:237999"
+ misc_feature complement(order(1275485..1275493,1275515..1275520))
+ /locus_tag="SARI_01322"
+ /note="ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:237999"
+ misc_feature complement(order(1275401..1275409,1275419..1275427))
+ /locus_tag="SARI_01322"
+ /note="flexible hinge region; other site"
+ /db_xref="CDD:237999"
+ misc_feature complement(1275119..1275322)
+ /locus_tag="SARI_01322"
+ /note="helix_turn_helix, cAMP Regulatory protein
+ C-terminus; DNA binding domain of prokaryotic regulatory
+ proteins belonging to the catabolite activator protein
+ family; Region: HTH_CRP; cd00092"
+ /db_xref="CDD:238044"
+ misc_feature complement(1275308..1275313)
+ /locus_tag="SARI_01322"
+ /note="putative switch regulator; other site"
+ /db_xref="CDD:238044"
+ misc_feature complement(order(1275197..1275199,1275224..1275232,
+ 1275236..1275238))
+ /locus_tag="SARI_01322"
+ /note="non-specific DNA interactions [nucleotide binding];
+ other site"
+ /db_xref="CDD:238044"
+ misc_feature complement(1275179..1275199)
+ /locus_tag="SARI_01322"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:238044"
+ misc_feature complement(order(1275179..1275181,1275191..1275196))
+ /locus_tag="SARI_01322"
+ /note="sequence specific DNA binding site [nucleotide
+ binding]; other site"
+ /db_xref="CDD:238044"
+ misc_feature complement(1275191..1275196)
+ /locus_tag="SARI_01322"
+ /note="putative cAMP binding site [chemical binding];
+ other site"
+ /db_xref="CDD:238044"
+ gene complement(1276013..1276528)
+ /locus_tag="SARI_01323"
+ CDS complement(1276013..1276528)
+ /locus_tag="SARI_01323"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR001497"
+ /inference="protein motif:HMMPfam:IPR008332"
+ /inference="protein motif:HMMTigr:IPR001497"
+ /inference="protein motif:ScanRegExp:IPR001497"
+ /inference="similar to AA sequence:INSD:AAL20577.1"
+ /note="'KEGG: stt:t1563 1.1e-86 ogt;
+ O6-methylguanine-DNA-alkyltransferase K00567;
+ COG: COG0350 Methylated DNA-protein cysteine
+ methyltransferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="O-6-alkylguanine-DNA:cysteine-protein
+ methyltransferase"
+ /protein_id="YP_001570367.1"
+ /db_xref="GI:161503255"
+ /db_xref="InterPro:IPR001497"
+ /db_xref="InterPro:IPR008332"
+ /db_xref="InterPro:IPR011991"
+ /translation="MLRLLEEKIATPLGPLWVICDEQFRLRAVEWEQYHDRMEQLLDI
+ HYRHEGYERISSTNPGGLSDKIADYFAGNLAVIDNLETATGGTPFQREVWQALRTIPC
+ GQVMHYGQLAERLGRPGAARAVGAANGTNPISIVVPCHRVIGRNGTMTGYAGGVQRKE
+ WLLRHEGYLLL"
+ misc_feature complement(1276016..1276528)
+ /locus_tag="SARI_01323"
+ /note="O-6-alkylguanine-DNA:cysteine-protein
+ methyltransferase; Provisional; Region: PRK10286"
+ /db_xref="CDD:182355"
+ misc_feature complement(1276277..1276522)
+ /locus_tag="SARI_01323"
+ /note="6-O-methylguanine DNA methyltransferase,
+ ribonuclease-like domain; Region: Methyltransf_1N;
+ pfam02870"
+ /db_xref="CDD:217259"
+ misc_feature complement(1276028..1276264)
+ /locus_tag="SARI_01323"
+ /note="The DNA repair protein O6-alkylguanine-DNA
+ alkyltransferase (ATase; also known as AGT, AGAT and MGMT)
+ reverses O6-alkylation DNA damage by transferring O6-alkyl
+ adducts to an active site cysteine irreversibly, without
+ inducing DNA strand breaks. ATases...; Region: ATase;
+ cd06445"
+ /db_xref="CDD:119438"
+ misc_feature complement(order(1276076..1276078,1276097..1276099,
+ 1276112..1276114,1276136..1276138,1276142..1276147,
+ 1276154..1276156,1276160..1276165,1276169..1276171,
+ 1276178..1276180,1276202..1276207,1276259..1276264))
+ /locus_tag="SARI_01323"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:119438"
+ misc_feature complement(order(1276031..1276033,1276103..1276105,
+ 1276109..1276114,1276205..1276207))
+ /locus_tag="SARI_01323"
+ /note="active site"
+ /db_xref="CDD:119438"
+ gene 1276990..1277553
+ /locus_tag="SARI_01324"
+ CDS 1276990..1277553
+ /locus_tag="SARI_01324"
+ /inference="protein motif:HMMPfam:IPR002625"
+ /inference="protein motif:HMMSmart:IPR002625"
+ /inference="similar to AA sequence:REFSEQ:YP_150492.1"
+ /note="'COG: COG2840 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570368.1"
+ /db_xref="GI:161503256"
+ /db_xref="InterPro:IPR002625"
+ /translation="MNLDDKALFLDAMEDVQPLKRHTDVYWQPTRKLKAPQRIDTLQL
+ DNFLTTGFLDILPLNEPLEFRREGLQQGVIDKLRSGKYPQQASLNLLRQPVETCRKML
+ FRFIFEAQTEGLRNVLIIHGKGREAKSHANIVRSYVARWLTEFEDVQAYCTALPHHGG
+ GGACYVALRKTVQAKQDNWERHAKRSR"
+ misc_feature 1276990..1277511
+ /locus_tag="SARI_01324"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG2840"
+ /db_xref="CDD:225396"
+ misc_feature 1277251..1277496
+ /locus_tag="SARI_01324"
+ /note="Smr domain; Region: Smr; pfam01713"
+ /db_xref="CDD:216658"
+ gene 1277984..1279141
+ /locus_tag="SARI_01325"
+ CDS 1277984..1279141
+ /locus_tag="SARI_01325"
+ /inference="protein motif:HMMPfam:IPR003660"
+ /inference="protein motif:HMMPfam:IPR004089"
+ /inference="protein motif:HMMSmart:IPR004089"
+ /inference="similar to AA sequence:REFSEQ:NP_460616.1"
+ /note="'KEGG: btl:BALH_1654 0.0048 vanS; sensor histidine
+ kinase;
+ COG: COG0840 Methyl-accepting chemotaxis protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570369.1"
+ /db_xref="GI:161503257"
+ /db_xref="InterPro:IPR003660"
+ /db_xref="InterPro:IPR004089"
+ /translation="MLRNISIRTCIILFMLCTFLLVDALQMIFLNDLRFLIAFNIIYL
+ VSMLLLWWYMTNYLVVPINTVKKSIEEVTAGNLSIHISEFGNNCAGRLIPGINSLSDN
+ ISTLVSEIRSSSQTAMTLSEQLAARSMALSVKTEQQSASLIQTAASMDEMAASTKNNA
+ DNTRMASIQADCATQCARKGGELMVRVAENMRSITDCASQMTEIISLIDGIAFQTNIL
+ SLNAAVEAARAGDYGKGFSVVAGEVRNLAHRSAEAAKSIKALINVTHDNVRQGAAIVQ
+ EAEKNMQEIVGGSGQLNLLMSEISTTTGEQEKGINQITLALSDLESATHGNVLMVEAL
+ SASSDVLKAQVIELQTKTDKFRLWQPNYSERFLPLSHAPSPATLTRRGQVW"
+ misc_feature 1278089..1278298
+ /locus_tag="SARI_01325"
+ /note="HAMP domain; Region: HAMP; pfam00672"
+ /db_xref="CDD:216054"
+ misc_feature 1278308..1279051
+ /locus_tag="SARI_01325"
+ /note="Methyl-accepting chemotaxis-like domains
+ (chemotaxis sensory transducer); Region: MA; smart00283"
+ /db_xref="CDD:214599"
+ misc_feature 1278389..1278988
+ /locus_tag="SARI_01325"
+ /note="Methyl-accepting chemotaxis protein (MCP),
+ signaling domain; Region: MCP_signal; cd11386"
+ /db_xref="CDD:206779"
+ misc_feature order(1278413..1278418,1278425..1278430,1278437..1278439,
+ 1278446..1278451,1278455..1278460,1278467..1278469,
+ 1278476..1278481,1278488..1278490,1278497..1278502,
+ 1278509..1278514,1278521..1278523,1278530..1278535,
+ 1278539..1278544,1278554..1278556,1278560..1278565,
+ 1278572..1278574,1278581..1278586,1278593..1278598,
+ 1278605..1278607,1278614..1278616,1278623..1278628,
+ 1278635..1278637,1278647..1278649,1278656..1278658,
+ 1278677..1278679,1278689..1278691,1278698..1278700,
+ 1278707..1278712,1278719..1278721,1278728..1278733,
+ 1278740..1278745,1278749..1278754,1278761..1278766,
+ 1278803..1278808,1278815..1278817,1278824..1278829,
+ 1278836..1278838,1278845..1278850,1278854..1278859,
+ 1278866..1278871,1278878..1278880,1278887..1278892,
+ 1278899..1278901,1278908..1278913,1278917..1278922,
+ 1278929..1278934,1278938..1278943,1278950..1278952,
+ 1278959..1278964,1278971..1278973,1278980..1278985)
+ /locus_tag="SARI_01325"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:206779"
+ misc_feature 1278623..1278724
+ /locus_tag="SARI_01325"
+ /note="putative CheW interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:206779"
+ gene 1279283..1280266
+ /gene="zntB"
+ /locus_tag="SARI_01326"
+ CDS 1279283..1280266
+ /gene="zntB"
+ /locus_tag="SARI_01326"
+ /inference="protein motif:HMMPanther:IPR002523"
+ /inference="protein motif:HMMPfam:IPR002523"
+ /inference="similar to AA sequence:INSD:AAG40855.1"
+ /note="'COG: COG0598 Mg2+ and Co2+ transporters;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="zinc transporter"
+ /protein_id="YP_001570370.1"
+ /db_xref="GI:161503258"
+ /db_xref="InterPro:IPR002523"
+ /translation="MEAIKGSEVNVPDAVFAWLLDGRGGVKPLEDDDVIDSQHPCWLH
+ LNYTHPDSARWLASTPLLPNNVRDALAGESSRPRVSRMGEGTLITLRCINGSTDERPD
+ QLVAMRLYMDERLIVSTRQRKVLALDDVVSDLQEGAGPTDCGGWLVDVCDALTDHASE
+ FIEQLHDKIIDLEDNLLDQQIPPRGFLALLRKQLIVMRRYMAPQRDVYARLASERLPW
+ MSDDHRRRMQDIADRLGRGLDEIDACIARTGIMADEIALVMQESLTRRTYTMSLMAMV
+ FLPSTFLTGLFGVNLGGIPGGGWRFGFSLFCILLVVLIAGVTLWLHRSKWL"
+ misc_feature 1279313..1280263
+ /gene="zntB"
+ /locus_tag="SARI_01326"
+ /note="Mg2+ and Co2+ transporters [Inorganic ion transport
+ and metabolism]; Region: CorA; COG0598"
+ /db_xref="CDD:223671"
+ misc_feature 1279397..1280263
+ /gene="zntB"
+ /locus_tag="SARI_01326"
+ /note="Salmonella typhimurium Zn2+ transporter ZntB-like
+ subgroup; Region: ZntB-like_1; cd12833"
+ /db_xref="CDD:213367"
+ misc_feature order(1279412..1279414,1279421..1279423,1279505..1279513,
+ 1279547..1279549,1279553..1279555,1279595..1279600,
+ 1279640..1279651,1279655..1279660,1279742..1279744,
+ 1279751..1279753,1279895..1279900,1279907..1279909,
+ 1279973..1279975)
+ /gene="zntB"
+ /locus_tag="SARI_01326"
+ /note="Cl binding site [ion binding]; other site"
+ /db_xref="CDD:213367"
+ misc_feature order(1279472..1279474,1279481..1279486,1279514..1279516,
+ 1279520..1279522,1279667..1279669,1279679..1279681,
+ 1279715..1279717,1279724..1279726,1279736..1279738,
+ 1279748..1279750,1279757..1279762,1279769..1279771,
+ 1279778..1279783,1279787..1279792,1279799..1279801,
+ 1279832..1279837,1279841..1279846,1279853..1279858,
+ 1279865..1279870,1279874..1279879,1279889..1279891,
+ 1279895..1279900,1279907..1279912,1279919..1279924,
+ 1279955..1279960,1279964..1279969,1279976..1279981,
+ 1279985..1279990,1279997..1280002,1280006..1280011,
+ 1280015..1280023,1280030..1280053,1280057..1280095,
+ 1280099..1280107,1280111..1280128,1280132..1280155,
+ 1280189..1280194,1280201..1280206,1280240..1280242,
+ 1280249..1280251)
+ /gene="zntB"
+ /locus_tag="SARI_01326"
+ /note="oligomer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:213367"
+ gene 1280606..1280680
+ /locus_tag="SARI_01327"
+ misc_RNA 1280606..1280680
+ /locus_tag="SARI_01327"
+ /product="C0343 RNA"
+ /inference="nucleotide motif:Rfam:RF00120"
+ /note="Rfam score 60.41"
+ gene 1280753..1282126
+ /locus_tag="SARI_01328"
+ CDS 1280753..1282126
+ /locus_tag="SARI_01328"
+ /inference="protein motif:HMMPfam:IPR001650"
+ /inference="protein motif:HMMPfam:IPR005580"
+ /inference="protein motif:HMMPfam:IPR011545"
+ /inference="protein motif:HMMSmart:IPR001650"
+ /inference="protein motif:HMMSmart:IPR014001"
+ /inference="protein motif:ScanRegExp:IPR000629"
+ /inference="similar to AA sequence:REFSEQ:YP_150494.1"
+ /note="'exhibits an RNA-dependent ATPase activity,
+ specifically stimulated by bacterial 23S rRNA'"
+ /codon_start=1
+ /transl_table=11
+ /product="ATP-dependent RNA helicase DbpA"
+ /protein_id="YP_001570371.1"
+ /db_xref="GI:161503259"
+ /db_xref="InterPro:IPR000629"
+ /db_xref="InterPro:IPR001650"
+ /db_xref="InterPro:IPR005580"
+ /db_xref="InterPro:IPR011545"
+ /db_xref="InterPro:IPR014001"
+ /translation="MTAFSTLKVLPTAQLNNLNELGYLEMTPVQAASLPVILAGNDVR
+ VQARTGSGKTAAFGLGLLHRIDVSLFQTQALVLCPTRELADQVAGELRRLARFLPNTK
+ ILTLCGGQPFGVQRDSLQHAPHIIVATPGRLLDHLQKRTVSLDALHILVMDEADRMLD
+ MGFSDAIDEVIRFAPATRQTLLFSATWPETIAAISGRVQQQPMHIDIDTVDALPAIEQ
+ QFFETSAQEKISLLQTLLSQHQPASCVVFCNTKKDCQAVCDALNAAGQSALALHGDLE
+ QRDRDQTLVRFTNGSARILVATDVAARGLDIKSLELVVNYELAWDPEAHVHRIGRTAR
+ AGSSGLAISFCAPEEAQRANILSEMLQLKLNWLNAPARQPLLPLAAEMATLCIDGGKK
+ AKMRPGDILGALTGDIGLDGADIGKINVHPMHVYVAVRQAVAQKACKQLQNGKIKGKS
+ CRVRLLK"
+ misc_feature 1280753..1282123
+ /locus_tag="SARI_01328"
+ /note="ATP-dependent RNA helicase DbpA; Provisional;
+ Region: PRK11776"
+ /db_xref="CDD:236977"
+ misc_feature 1280762..1281367
+ /locus_tag="SARI_01328"
+ /note="DEAD-box helicases. A diverse family of proteins
+ involved in ATP-dependent RNA unwinding, needed in a
+ variety of cellular processes including splicing, ribosome
+ biogenesis and RNA degradation. The name derives from the
+ sequence of the Walker B motif; Region: DEADc; cd00268"
+ /db_xref="CDD:238167"
+ misc_feature 1280900..1280914
+ /locus_tag="SARI_01328"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238167"
+ misc_feature 1281209..1281220
+ /locus_tag="SARI_01328"
+ /note="Mg++ binding site [ion binding]; other site"
+ /db_xref="CDD:238167"
+ misc_feature 1281302..1281310
+ /locus_tag="SARI_01328"
+ /note="motif III; other site"
+ /db_xref="CDD:238167"
+ misc_feature 1281404..1281784
+ /locus_tag="SARI_01328"
+ /note="Helicase superfamily c-terminal domain; associated
+ with DEXDc-, DEAD-, and DEAH-box proteins, yeast
+ initiation factor 4A, Ski2p, and Hepatitis C virus NS3
+ helicases; this domain is found in a wide variety of
+ helicases and helicase related proteins; may...; Region:
+ HELICc; cd00079"
+ /db_xref="CDD:238034"
+ misc_feature order(1281497..1281508,1281566..1281571,1281644..1281652)
+ /locus_tag="SARI_01328"
+ /note="nucleotide binding region [chemical binding]; other
+ site"
+ /db_xref="CDD:238034"
+ misc_feature order(1281668..1281670,1281731..1281733,1281743..1281745,
+ 1281752..1281754)
+ /locus_tag="SARI_01328"
+ /note="ATP-binding site [chemical binding]; other site"
+ /db_xref="CDD:238034"
+ misc_feature 1281902..1282120
+ /locus_tag="SARI_01328"
+ /note="RNA recognition motif in Escherichia coli RNA
+ helicase dbpA and similar proteins; Region:
+ RRM_EcDbpA_like; cd12501"
+ /db_xref="CDD:240945"
+ misc_feature order(1281923..1281925,1281938..1281949,1281953..1281961,
+ 1281965..1281970,1281986..1281988,1281995..1282006,
+ 1282094..1282099,1282106..1282108)
+ /locus_tag="SARI_01328"
+ /note="putative RNA binding site [nucleotide binding];
+ other site"
+ /db_xref="CDD:240945"
+ gene complement(1282170..1283105)
+ /locus_tag="SARI_01329"
+ CDS complement(1282170..1283105)
+ /locus_tag="SARI_01329"
+ /inference="protein motif:HMMPfam:IPR011063"
+ /inference="protein motif:HMMPIR:IPR012089"
+ /inference="similar to AA sequence:INSD:AAL27304.1"
+ /note="TtcA; YdaO; catalyzes the thiolation of cytosine 32
+ in specific tRNAs"
+ /codon_start=1
+ /transl_table=11
+ /product="C32 tRNA thiolase"
+ /protein_id="YP_001570372.1"
+ /db_xref="GI:161503260"
+ /db_xref="InterPro:IPR011063"
+ /db_xref="InterPro:IPR012089"
+ /translation="MQDNQKVKKKEQYNLNKLQKRLRRNVGEAIADFNMIEEGDRIMV
+ CLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFPEHILPAYLEQLGVEYKI
+ VEENTYGIVKEKIPEGKTTCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFL
+ NMFYGGKMKGMPPKLMSDDGKHIVIRPLAYCREKDIVRFAEAKAFPIIPCNLCGSQPN
+ LQRQVIADMLRDWDKRYPGRIETMFSAMQDIVPSHLCDTNLFDFKGIAHGSEVVDGGD
+ LAFDREEIPLQPAGWQPEEDDTPLETLRLDVIEVK"
+ misc_feature complement(1282302..1283075)
+ /locus_tag="SARI_01329"
+ /note="tRNA 2-thiocytidine biosynthesis protein TtcA;
+ Provisional; Region: PRK10696"
+ /db_xref="CDD:236737"
+ misc_feature complement(1282458..1282985)
+ /locus_tag="SARI_01329"
+ /note="This is a subfamily of Adenine nucleotide alpha
+ hydrolases superfamily.Adeninosine nucleotide alpha
+ hydrolases superfamily includes N type ATP PPases and ATP
+ sulphurylases. It forms a apha/beta/apha fold which binds
+ to Adenosine group. This subfamily; Region:
+ Alpha_ANH_like_II; cd01993"
+ /db_xref="CDD:238951"
+ misc_feature complement(order(1282872..1282874,1282878..1282880,
+ 1282950..1282961,1282965..1282973))
+ /locus_tag="SARI_01329"
+ /note="Ligand Binding Site [chemical binding]; other site"
+ /db_xref="CDD:238951"
+ gene 1283838..1287257
+ /locus_tag="SARI_01330"
+ CDS 1283838..1287257
+ /locus_tag="SARI_01330"
+ /inference="similar to AA sequence:REFSEQ:YP_150496.1"
+ /note="'COG: NOG26587 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570373.1"
+ /db_xref="GI:161503261"
+ /translation="MPVTLEHVSSRPVQQKLNTKGIKTWDTIQYLSALDRAHKDTVFH
+ EQISNLPEEYIHLDEMARDEKEYGLNIYEFFFESTAEIICEDIKSTLDFYYLKSPTFR
+ RLVNYRVNYSIGNDIDTSKCEVIVSPNYSYQNTEGSSVYLSLPFDKKGFPINPESNDC
+ DNNISSEKVLLDLFLKHILYDDLKVDHEVTNLYSNVIYKEIDSTAMAHASLCFSQAAV
+ SDKHELFNIDSVTVQPKSTEQVIFAGEEIQKQILFFFERENNFQPATAHKMERNIKNI
+ AVTGLLLSSRLTIADGYGRKNDNSENKNNFSSDKEPLRYARALPEDHPAPNMEPHPLG
+ KMIDGIVEHSSFAAGISLFETLKKIGDEQLMNDYKRGYHELLVFSQTGQWTHGGRRLT
+ AEYMFNGLIIHLNEIEILINDGGKVSFEHFVREHIEHQYKIYELIARDMLVHPIYIRS
+ RIFATRRIASALANESHYTKVLNQKFPEISSSNFDTFYGKEAIFTALKIVNYYREEKG
+ MPTFNSKKMKDLFKRVQLVIRHLSRNGGDKILLSPDGIKYNFSIMRNIIYWCAKITGP
+ VNDKKINALSRKIVVNNEFSRHIKSLFPRGNGFLELLMKAAIDTQLNWAEKYYKAVTH
+ VKDHIQDCDVLGLMNINKMLRDTVVGLIHEISDIAQSSWLTAEDQHEKQVQALEAFKS
+ KVSSMDGGQAFVYGFDKVIQEGLWGLIELSFDIDDTVHHRTVSSLSPASRAGLHFLGT
+ IWNIVMSFVPGFNALAGTSSILNRAIVEKSTDVCGYIQDVIRIGMEAAPVAEAKFTER
+ ASNAKYTGLRFVENKIERGVIRSPIQKGSNYKVIESIENIDFIYQKRNNKILELNPEG
+ NDGLYRATGFNKETHGYYKQSGEGFYRKQKSFSPLSTEAPNTIKYGEREIVLSKEPGS
+ ETYQGTFSDTGKNVGMTFYRTSDGKFYQASGLKGGGPIRHVDKPYSELREGDVGYDED
+ LLDISDDSPLLEDMLPSLSEELYPTSEENVQSIYKKLQSGATAAGETEVVLCRGTTGP
+ QAENIVKLKTAGGVEGADPNVLPVSEETARLQVRNGRVVPEYTTDLSVADRFSREHYL
+ IIVKVKAKYITRGSVSESGWVIPHTAPVEPVGIIDRTYGHAENIGQANASK"
+ gene 1287748..1288086
+ /locus_tag="SARI_01331"
+ CDS 1287748..1288086
+ /locus_tag="SARI_01331"
+ /inference="protein motif:HMMPfam:IPR000390"
+ /inference="similar to AA sequence:REFSEQ:YP_216634.1"
+ /note="'COG: COG2076 Membrane transporters of cations and
+ cationic drugs;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570374.1"
+ /db_xref="GI:161503262"
+ /db_xref="InterPro:IPR000390"
+ /translation="MTKEAVIFLFIAIVVEVIATISLKLSDSFTRLVPSIVTIVGYCI
+ AFWCLTIPMRTIPAGIIYAIWSGVGIVLIGLIGWLFLGQKLDMPAIIGMLLIICGVIV
+ INLFSKSVSH"
+ misc_feature 1287760..1288071
+ /locus_tag="SARI_01331"
+ /note="Membrane transporters of cations and cationic drugs
+ [Inorganic ion transport and metabolism]; Region: EmrE;
+ COG2076"
+ /db_xref="CDD:224987"
+ gene complement(1288139..1288573)
+ /locus_tag="SARI_01332"
+ CDS complement(1288139..1288573)
+ /locus_tag="SARI_01332"
+ /inference="protein motif:Gene3D:IPR006016"
+ /inference="protein motif:HMMPfam:IPR006016"
+ /inference="similar to AA sequence:INSD:AAL20570.1"
+ /note="'COG: COG0589 Universal stress protein UspA and
+ related nucleotide-binding proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570375.1"
+ /db_xref="GI:161503263"
+ /db_xref="InterPro:IPR006016"
+ /translation="MNRTILVPIDISDSELTQRVISHVEAEAKIDDAKVHFLTVIPSL
+ PYYASLGLAYSAELPAMDDLKAEAKSQLEAIIKKFNLPADRVQAHVAEGSPKDKILEM
+ AKKLPADMVIIASHRPDITTYLLGSNAAAVVRHAECSVLVVR"
+ misc_feature complement(1288145..1288564)
+ /locus_tag="SARI_01332"
+ /note="Usp: Universal stress protein family. The universal
+ stress protein Usp is a small cytoplasmic bacterial
+ protein whose expression is enhanced when the cell is
+ exposed to stress agents. Usp enhances the rate of cell
+ survival during prolonged exposure to...; Region:
+ USP_Like; cd00293"
+ /db_xref="CDD:238182"
+ misc_feature complement(order(1288187..1288198,1288226..1288228,
+ 1288232..1288237,1288454..1288456,1288544..1288552))
+ /locus_tag="SARI_01332"
+ /note="Ligand Binding Site [chemical binding]; other site"
+ /db_xref="CDD:238182"
+ gene 1288915..1289032
+ /locus_tag="SARI_01333"
+ misc_RNA 1288915..1289032
+ /locus_tag="SARI_01333"
+ /product="MicC RNA"
+ /inference="nucleotide motif:Rfam:RF00121"
+ /note="Rfam score 118.38"
+ gene complement(1289054..1292578)
+ /locus_tag="SARI_01334"
+ CDS complement(1289054..1292578)
+ /locus_tag="SARI_01334"
+ /inference="protein motif:Gene3D:IPR009014"
+ /inference="protein motif:HMMPfam:IPR001450"
+ /inference="protein motif:HMMPfam:IPR002869"
+ /inference="protein motif:HMMPfam:IPR002880"
+ /inference="protein motif:HMMPfam:IPR011766"
+ /inference="protein motif:HMMTigr:IPR011895"
+ /inference="protein motif:ScanRegExp:IPR000585"
+ /inference="protein motif:ScanRegExp:IPR001450"
+ /inference="protein motif:superfamily:IPR009014"
+ /inference="protein motif:superfamily:IPR009051"
+ /note="'KEGG: spt:SPA1236 0. nifJ; probable
+ pyruvate-flavodoxin oxidoreductase K03737;
+ COG: COG1013 Pyruvate:ferredoxin oxidoreductase and
+ related 2-oxoacid:ferredoxin oxidoreductases, beta
+ subunit;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570376.1"
+ /db_xref="GI:161503264"
+ /db_xref="InterPro:IPR000585"
+ /db_xref="InterPro:IPR001450"
+ /db_xref="InterPro:IPR002869"
+ /db_xref="InterPro:IPR002880"
+ /db_xref="InterPro:IPR009014"
+ /db_xref="InterPro:IPR009051"
+ /db_xref="InterPro:IPR011766"
+ /db_xref="InterPro:IPR011895"
+ /translation="MQTIDGNGAVASVAFRTSEIIAIYPITPSSTMAEQADAWAGNGV
+ KNVWGDTPRVVEMQSEGGAIAAVHGALQTGTLSTSFTSSQGLLLMIPTLYKLAGQLTP
+ FVLHVAARTVATHALSIFGDHSDVMAVRQTGCAMLCAASVQEAQDFALIAHRATLKSR
+ VPFIHFFDGFRTSHEINKIIPLTDETILNLMPQAEIDAHRARALNPEHPVIRGTSANP
+ DTYFQSREATNPWYNAVYDNVEEAMKAFGDATGRQYQPFEYYGHPQAERVIIMMGSAL
+ GTCEEVVDALLVRGEKVGVLKVRLFRPFSAKHLLQALPETVRAIAVLDRTKEPGAQAE
+ PLYLDVMTALAEAFNNGERETLPRTIGGRYGLSSKEFGPACVLAVFNELSRAKPKPRF
+ TVGIYDDVTHLSLPLPENTLPGSAKLEALFYGLGSDGSVSATKNNIKIIGNSTPWYAQ
+ GYFVYDSKKAGGLTVSHLRVSEKPIRSAYLISQADFVGCHQLQFIDKYQMAERLKPGG
+ IFLLNTPYSADEVWLRLPQEVQAVLNQKKARFYVVNAAKIARECGLGARINTVMQMAF
+ FHLTHILPGDSALVELQGAIAKSYSSKGQDLVERNWQALALAQASLAEVPLQAVNPHS
+ AHRPPVVSDAAPDFVKTVTAAMLAGLGDALPVSALPPDGTWPIGTTRWEKRNIAEEIP
+ VWKEELCTQCNHCVAACPHSAIRAKVVSPQAMENAPASLHSLDVKSRDMRGQKYVLQV
+ APEDCTGCNLCVEVCPAKDRQNPEVKAINMMSRLEHVEEEKVNYDFFLDLPEIDRSKL
+ ERIDIRTSQLITPLFEYSGACSGCGETPYIKLLTQLYGDRMLIANATGCSSIYGGNLP
+ STPYTTDANGRGPAWANSLFEDNAEFGLGFRLSVDQHRARVMRLLAQFADRIPAELND
+ ALHAEATPDVRREQVAALRQHLKSVAGAEELLKDADALVEKSIWLIGGDGWAYDIGFG
+ GLDHVLSLTENVNILVLDTQCYSNTGGQASKATPLGAVTKFGEHGKRKARKDLGVSMM
+ MYGHVYVAQISLGAQLNQTVKAIQEAEAWPGPSLIIAYSPCEEHGYDLALSHDQMRQL
+ TATGFWPLYRFDPRRADEGKPPLALDSRPPSDALAETLLNEQRFRRLNAQQPEVAEKL
+ WRDAALDLQKRYDFLALLAGKAEKPGAD"
+ misc_feature complement(1289081..1292578)
+ /locus_tag="SARI_01334"
+ /note="pyruvate:ferredoxin (flavodoxin) oxidoreductase,
+ homodimeric; Region: pyruv_ox_red; TIGR02176"
+ /db_xref="CDD:131231"
+ misc_feature complement(1292072..1292563)
+ /locus_tag="SARI_01334"
+ /note="Pyrimidine (PYR) binding domain of pyruvate
+ ferredoxin oxidoreductase (PFOR), indolepyruvate
+ ferredoxin oxidoreductase alpha subunit (IOR-alpha), and
+ related proteins; Region: TPP_PYR_PFOR_IOR-alpha_like;
+ cd07034"
+ /db_xref="CDD:132917"
+ misc_feature complement(order(1292186..1292191,1292240..1292245,
+ 1292282..1292284,1292294..1292296,1292303..1292305,
+ 1292354..1292356,1292360..1292362,1292369..1292377,
+ 1292381..1292386,1292405..1292416,1292477..1292479,
+ 1292486..1292488,1292498..1292500,1292516..1292521))
+ /locus_tag="SARI_01334"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:132917"
+ misc_feature complement(order(1292294..1292296,1292303..1292305,
+ 1292354..1292356,1292360..1292362,1292369..1292377,
+ 1292381..1292386,1292405..1292416,1292477..1292482,
+ 1292498..1292500,1292504..1292509,1292516..1292521))
+ /locus_tag="SARI_01334"
+ /note="PYR/PP interface [polypeptide binding]; other site"
+ /db_xref="CDD:132917"
+ misc_feature complement(order(1292399..1292401,1292504..1292506))
+ /locus_tag="SARI_01334"
+ /note="TPP binding site [chemical binding]; other site"
+ /db_xref="CDD:132917"
+ misc_feature complement(order(1292249..1292251,1292498..1292500))
+ /locus_tag="SARI_01334"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:132917"
+ misc_feature complement(1290773..1291330)
+ /locus_tag="SARI_01334"
+ /note="Pyruvate:ferredoxin oxidoreductase and related
+ 2-oxoacid:ferredoxin oxidoreductases, gamma subunit
+ [Energy production and conversion]; Region: PorG; COG1014"
+ /db_xref="CDD:223946"
+ misc_feature complement(1290542..1290703)
+ /locus_tag="SARI_01334"
+ /note="Domain of unknown function; Region: EKR;
+ smart00890"
+ /db_xref="CDD:197958"
+ misc_feature complement(1290467..1290538)
+ /locus_tag="SARI_01334"
+ /note="4Fe-4S binding domain; Region: Fer4_6; pfam12837"
+ /db_xref="CDD:205098"
+ misc_feature complement(<1290311..1290355)
+ /locus_tag="SARI_01334"
+ /note="4Fe-4S binding domain; Region: Fer4; pfam00037"
+ /db_xref="CDD:215671"
+ misc_feature complement(1289081..1290148)
+ /locus_tag="SARI_01334"
+ /note="Thiamine pyrophosphate (TPP family), PFOR_PNO
+ subfamily, TPP-binding module; composed of proteins
+ similar to the single subunit pyruvate ferredoxin
+ oxidoreductase (PFOR) of Desulfovibrio Africanus, present
+ in bacteria and amitochondriate eukaryotes. This...;
+ Region: TPP_PFOR_PNO; cd03377"
+ /db_xref="CDD:239472"
+ misc_feature complement(order(1289588..1289596,1289600..1289602,
+ 1289606..1289608,1289684..1289695,1289948..1289953,
+ 1290038..1290040,1290107..1290109))
+ /locus_tag="SARI_01334"
+ /note="TPP-binding site [chemical binding]; other site"
+ /db_xref="CDD:239472"
+ misc_feature complement(order(1289099..1289101,1289153..1289155,
+ 1289162..1289164,1289168..1289170,1289177..1289179,
+ 1289189..1289191,1289339..1289350,1289360..1289365,
+ 1289486..1289488,1289495..1289500,1289510..1289512,
+ 1289522..1289524,1289534..1289536,1289543..1289545,
+ 1289549..1289551,1289570..1289572,1289585..1289590,
+ 1289633..1289635,1289651..1289656,1289666..1289668,
+ 1289714..1289716,1289729..1289731,1289882..1289884,
+ 1289891..1289893,1289900..1289905,1289912..1289917,
+ 1289921..1289926,1289933..1289938,1289945..1289947,
+ 1289954..1289971,1289975..1289983,1290005..1290007,
+ 1290020..1290022,1290062..1290070))
+ /locus_tag="SARI_01334"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:239472"
+ gene 1292831..1293121
+ /locus_tag="SARI_01335"
+ CDS 1292831..1293121
+ /locus_tag="SARI_01335"
+ /inference="similar to AA sequence:REFSEQ:YP_216631.1"
+ /note="'COG: COG3042 Putative hemolysin;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570377.1"
+ /db_xref="GI:161503265"
+ /translation="MDKLEGREMRAAFWVGCAALLLSACSSEPVQQATAAHVSPGMKA
+ AMSSAGEANCAMIGGSLSAARQLDGSVIAMCALPNGKRCNEQSLAAGSCGSY"
+ misc_feature 1292885..1293118
+ /locus_tag="SARI_01335"
+ /note="Putative hemolysin [General function prediction
+ only]; Region: Hlx; COG3042"
+ /db_xref="CDD:225584"
+ misc_feature 1292960..1293109
+ /locus_tag="SARI_01335"
+ /note="Domain of unknown function (DUF333); Region:
+ DUF333; pfam03891"
+ /db_xref="CDD:202798"
+ gene complement(1293165..1293575)
+ /locus_tag="SARI_01336"
+ CDS complement(1293165..1293575)
+ /locus_tag="SARI_01336"
+ /inference="protein motif:HMMPfam:IPR005184"
+ /inference="similar to AA sequence:INSD:"
+ /note="'KEGG: pmu:PM0180 0.0023 murZ;
+ UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790;
+ COG: COG3187 Heat shock protein;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="heat-inducible protein"
+ /protein_id="YP_001570378.1"
+ /db_xref="GI:161503266"
+ /db_xref="InterPro:IPR005184"
+ /translation="MKKIVTLVALSFMMTGCVSSGKVSVKREQLEHHRFVLESVNGKT
+ VTGPELSFGEDMTVSGKMCNQFTGEAKLSDGELKVKNVAMTRMVCADPQLNALDSIIS
+ EVFSKGAQVDLTANQLTLATAKTTLMFKLADLAH"
+ misc_feature complement(1293168..1293575)
+ /locus_tag="SARI_01336"
+ /note="heat-inducible protein; Provisional; Region:
+ PRK10449"
+ /db_xref="CDD:182470"
+ gene complement(1293686..1294675)
+ /locus_tag="SARI_01337"
+ CDS complement(1293686..1294675)
+ /locus_tag="SARI_01337"
+ /inference="protein motif:HMMPfam:IPR006139"
+ /inference="protein motif:HMMPfam:IPR006140"
+ /inference="protein motif:ScanRegExp:IPR006140"
+ /inference="similar to AA sequence:REFSEQ:YP_150502.1"
+ /note="'KEGG: spt:SPA1239 3.0e-171 ldhA; D-lactate
+ dehydrogenase K03778;
+ COG: COG1052 Lactate dehydrogenase and related
+ dehydrogenases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="D-lactate dehydrogenase"
+ /protein_id="YP_001570379.1"
+ /db_xref="GI:161503267"
+ /db_xref="InterPro:IPR006139"
+ /db_xref="InterPro:IPR006140"
+ /translation="MKLAVYSTKQYDKKYLQQVNKAFGFELEFFDFLLTEKTAKTANG
+ CEAVCIFVNDDGSRPVLEELKKHGVKYIALRCAGFNNVDLDAAKELGLQVVRVPAYSP
+ EAVAEHAVGMMMTLNRRIHRAYQRTRDANFSLEGLTGFTMHGKTAGVIGTGKIGVAAL
+ RILKGFGMRLLAFDPYPSAAALDLGVEYVDLQTLFAESDVISLHCPLTPENYHLLNHA
+ AFDQMKDGVMVINTSRGALIDSQAAIDALKNQKIGSLGMDVYENERDLFFEDKSNDVI
+ QDDVFRRLSACHNVLFTGHQAFLTAEALISISETTLQNLSQLEKGETCPNALF"
+ misc_feature complement(1293692..1294675)
+ /locus_tag="SARI_01337"
+ /note="D-Lactate and related Dehydrogenases, NAD-binding
+ and catalytic domains; Region: LDH_like_2; cd12183"
+ /db_xref="CDD:240659"
+ misc_feature complement(1293692..1294675)
+ /locus_tag="SARI_01337"
+ /note="Lactate dehydrogenase and related dehydrogenases
+ [Energy production and conversion / Coenzyme metabolism /
+ General function prediction only]; Region: LdhA; COG1052"
+ /db_xref="CDD:223980"
+ misc_feature complement(order(1293782..1293784,1293791..1293793,
+ 1293974..1293976,1294376..1294378,1294442..1294450))
+ /locus_tag="SARI_01337"
+ /note="putative ligand binding site [chemical binding];
+ other site"
+ /db_xref="CDD:240659"
+ misc_feature complement(order(1293782..1293787,1293791..1293793,
+ 1293899..1293904,1293974..1293982,1294034..1294036,
+ 1294043..1294045,1294055..1294066,1294151..1294159,
+ 1294208..1294219,1294223..1294225,1294361..1294363,
+ 1294376..1294378))
+ /locus_tag="SARI_01337"
+ /note="putative NAD binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:240659"
+ misc_feature complement(order(1293791..1293793,1293887..1293889,
+ 1293974..1293976))
+ /locus_tag="SARI_01337"
+ /note="catalytic site [active]"
+ /db_xref="CDD:240659"
+ gene 1294942..1297578
+ /locus_tag="SARI_01338"
+ CDS 1294942..1297578
+ /locus_tag="SARI_01338"
+ /note="'COG: NOG06225 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570380.1"
+ /db_xref="GI:161503268"
+ /translation="MKGKYKAALALLLLLFLVPLTLLMTLGLWVPTLAGIWLPVGTRI
+ ALEESPRLTRHGVVIPDLRYLVNDCPLAHITQAELTHPSRWLLNIKSLELDAACLAKL
+ PASEASPAAPRTLAQWQSMLPNTWINIDNVILAPWPEWQGKLAISMTPVVQQIRYQGE
+ KVKFQGQLHGQALTVSQLEIAALANQPPVSLAGEFTLPLVPDGLPVSGHAAATLRLPQ
+ EPSLVDAELEWRDNAGQLIVMARGNPDPILDLPWAVTRQRLTISDGRWNWPYRGFPLS
+ GRLAFNIDNWQAGLDNARVSGRLNILTHGDAGKANAVLTIGPGKLSMDSSAMPIQLTG
+ EAKQKDLIFYAVLPAMLRGSLADPQLAFAPGALLRSRGRVIDALDIDEIRWPLAGVRV
+ TQRGVDGRLQAILRAHENEMGDFVLHLDGLANDFLPDAGRWRWRYWGQGSFTPMHARW
+ DIAGQGEWRDNTIRLTSLSTGFDRLQYGAMTVTSPRLILDKPIVWVRDDKTPSLQGAL
+ SLEAGKTIFTSGSVLPPSTVNFSVEGREPTLFQFKGDLRAGAIGPVRLNGRWDGERLR
+ GQAWWPKQSLIVFQPLLPPDWKMTLREGSLYAQVAFSAAQGQGFEAGGHGVLKGGNAW
+ MPDNKINGVDFILPFRFHQGAWQLGTRGPVSLRIAEIVNQVTAKNITADLQGGYPWSE
+ SNPLLLSDVSVDVLGGKIIMKQLRMPQHDPALLRVQNISSSELISAINPKQFAMSGPV
+ SGALPLWLNNEKWIIKDGWLTNPGSMTLRIDKNTADAVVKDNVTAGSAINWLRYMEIT
+ HSWTKINVDNLGVLTMQAAITGKSRVDGKTAIVNLNYTHEENVFTLWRSLRFGDNLQA
+ WLEQNTALPQPPCRKDEDCEDK"
+ misc_feature 1295026..1297524
+ /locus_tag="SARI_01338"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10695"
+ /db_xref="CDD:182654"
+ gene 1297578..1297769
+ /locus_tag="SARI_01339"
+ CDS 1297578..1297769
+ /locus_tag="SARI_01339"
+ /inference="similar to AA sequence:REFSEQ:YP_150504.1"
+ /note="'COG: NOG17319 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570381.1"
+ /db_xref="GI:161503269"
+ /translation="MKMIIVMLSVFASFMVVSCTPRIEVAAPEQPITINMNVKIEHEI
+ HIKVDKDVEELLKSRSDLF"
+ misc_feature 1297587..1297763
+ /locus_tag="SARI_01339"
+ /note="YnbE-like lipoprotein; Region: Lipoprotein_19;
+ pfam13617"
+ /db_xref="CDD:205795"
+ gene 1297774..1298100
+ /locus_tag="SARI_01340"
+ CDS 1297774..1298100
+ /locus_tag="SARI_01340"
+ /inference="protein motif:BlastProDom:IPR008309"
+ /inference="protein motif:HMMPfam:IPR008309"
+ /inference="protein motif:HMMPIR:IPR008309"
+ /inference="similar to AA sequence:INSD:AAL20562.1"
+ /note="'COG: COG3784 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570382.1"
+ /db_xref="GI:161503270"
+ /db_xref="InterPro:IPR008309"
+ /translation="MMKKYLILWGLTLSLLTSSVWALTLDEARTQGRVGETLNGYLVA
+ LKNDAETQKLVLDINRARRASYQQLADSNHLPVDEVAKMAGQKLVERARPGEYVQGIN
+ GKWLRK"
+ misc_feature <1297849..1298097
+ /locus_tag="SARI_01340"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG3784"
+ /db_xref="CDD:226307"
+ gene 1298245..1298841
+ /locus_tag="SARI_01341"
+ CDS 1298245..1298841
+ /locus_tag="SARI_01341"
+ /inference="protein motif:HMMPfam:IPR000462"
+ /inference="similar to AA sequence:INSD:AAG56371.1"
+ /note="'KEGG: eci:UTI89_C1630 6.5e-73 ynbA; hypothetical
+ protein YnbA K00995;
+ COG: COG0558 Phosphatidylglycerophosphate synthase;
+ Psort location: endoplasmic reticulum, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570383.1"
+ /db_xref="GI:161503271"
+ /db_xref="InterPro:IPR000462"
+ /translation="MTLYQVKPAFQALLRPVMAWLYRHHITANQITLSAMVLSIATGL
+ ILIVWPLYFLLPIVLFVRMALNALDGMLARECGQQSRLGSILNETGDVISDIALYLPF
+ LFLADSSAPLVLAMLLAMVMSEFCGILAQTINGVRSYVGPFGKSDRVLVFGAGGLALT
+ VWPQAAQWSNIVWSIALVLLLWTIVNRCRSALISVSVK"
+ misc_feature 1298284..1298820
+ /locus_tag="SARI_01341"
+ /note="Phosphatidylglycerophosphate synthase [Lipid
+ metabolism]; Region: PgsA; COG0558"
+ /db_xref="CDD:223632"
+ gene 1298838..1299269
+ /locus_tag="SARI_01342"
+ CDS 1298838..1299269
+ /locus_tag="SARI_01342"
+ /inference="protein motif:HMMPfam:IPR000374"
+ /inference="similar to AA sequence:REFSEQ:ZP_00831317.1"
+ /note="'KEGG: ype:YPO2816 5.9e-40 ynbB; putative
+ phosphatidate cytidylyltransferase K00981;
+ COG: COG4589 Predicted CDP-diglyceride
+ synthetase/phosphatidate cytidylyltransferase;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570384.1"
+ /db_xref="GI:161503272"
+ /db_xref="InterPro:IPR000374"
+ /translation="MMLLEESLLVIFALLLVATLVNQILVWRRPDKDWRELTLRIRTW
+ WLIIILFSLALLSPTWLALTFFALLSFMALKEFLTLVPSRHSDRMPLLWIFIAIPINY
+ WLIGIGWYGMFVVFIPVYVFLFLPARMVKKAIYGRSQAQPA"
+ misc_feature 1298841..>1299227
+ /locus_tag="SARI_01342"
+ /note="Cytidylyltransferase family; Region: CTP_transf_1;
+ cl17467"
+ /db_xref="CDD:248021"
+ gene 1299483..1299821
+ /locus_tag="SARI_01343"
+ CDS 1299483..1299821
+ /locus_tag="SARI_01343"
+ /inference="protein motif:HMMPfam:IPR006913"
+ /inference="similar to AA sequence:INSD:AAV77194.1"
+ /note="'COG: COG3791 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570385.1"
+ /db_xref="GI:161503273"
+ /db_xref="InterPro:IPR006913"
+ /translation="MRGAVTVSAPLSGIKVVKGQDKLTEYRFNTGKAVHFFCSVCGIY
+ TFHQRRSNPDQYGVNVACIENVSPFDFACVEVNDGVTHPSDGDSNGVVGYLRYEPKKL
+ PPVETGGENV"
+ misc_feature <1299489..1299737
+ /locus_tag="SARI_01343"
+ /note="Glutathione-dependent formaldehyde-activating
+ enzyme; Region: GFA; cl01553"
+ /db_xref="CDD:242577"
+ gene complement(1299818..1300423)
+ /locus_tag="SARI_01344"
+ CDS complement(1299818..1300423)
+ /locus_tag="SARI_01344"
+ /inference="protein motif:HMMPfam:IPR003680"
+ /inference="similar to AA sequence:REFSEQ:YP_150507.1"
+ /note="FMN-dependent; requires NADH; catalyzes the
+ cleavage of azo bond in aromatic azo compounds"
+ /codon_start=1
+ /transl_table=11
+ /product="azoreductase"
+ /protein_id="YP_001570386.1"
+ /db_xref="GI:161503274"
+ /db_xref="InterPro:IPR003680"
+ /translation="MSKVLVLKSSILAGYSQSGQLTDYFIEQWREKHVADEITVRDLA
+ ANPVPVLDGELVGAMRPGDAPLTPRQQDALALSDELIAELKAHDVIVIAAPMYNFNIP
+ TQLKNYFDLIARAGVTFRYTEKGPEGLVTGKRAVVLSSRGGIHKDTPTDLIAPYLKVF
+ LGFIGITDVNFVFAEGIAYGPEVAAKAQSDAKAAIDSVVAA"
+ misc_feature complement(1299875..1300423)
+ /locus_tag="SARI_01344"
+ /note="azoreductase; Reviewed; Region: PRK00170"
+ /db_xref="CDD:234675"
+ misc_feature complement(<1300076..1300417)
+ /locus_tag="SARI_01344"
+ /note="NADPH-dependent FMN reductase; Region: FMN_red;
+ pfam03358"
+ /db_xref="CDD:217511"
+ gene 1300606..1304526
+ /locus_tag="SARI_01345"
+ CDS 1300606..1304526
+ /locus_tag="SARI_01345"
+ /inference="protein motif:HMMPfam:IPR001650"
+ /inference="protein motif:HMMPfam:IPR007502"
+ /inference="protein motif:HMMPfam:IPR011709"
+ /inference="protein motif:HMMSmart:IPR001650"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMSmart:IPR014001"
+ /inference="protein motif:HMMTigr:IPR010222"
+ /note="'involved in the post-transcriptional processing of
+ the daa operon mRNA, which encodes proteins involved in
+ fimbrial biogenesis of an enteropathogenic E. coli
+ strain'"
+ /codon_start=1
+ /transl_table=11
+ /product="ATP-dependent RNA helicase HrpA"
+ /protein_id="YP_001570387.1"
+ /db_xref="GI:161503275"
+ /db_xref="InterPro:IPR001650"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR007502"
+ /db_xref="InterPro:IPR010222"
+ /db_xref="InterPro:IPR011709"
+ /db_xref="InterPro:IPR014001"
+ /translation="MLPKILMTEQSTLTLHMLQQRLDLLMLRDRQRFARRLHGVKKVK
+ NPDAQQAIYQTMAKEIEQAAAQVVLREAARPPITYPQNLPVSQKKQDILEAVRDHQVV
+ IVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELQTEPGGCI
+ GYKVRFSDHVSSNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGY
+ LKELLPRRPDLKVIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDT
+ ERDQLQAIFDAVDELGRESPGDILIFMSGEREIRDTADALNKLNLRHTEVLPLYARLS
+ NSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIE
+ PISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALG
+ LGDIAAFPFVEAPDKRNIQDGVRLLEELGAITADGQQTVYKLTPLGRKLSQLSVDPRL
+ ARMVLEAQKHGCVREAMIITSALSIQDPRERPADKQQASDEKHRRFQDKESDFLAFVN
+ LWNYLGEQQKALSSNQFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGISVNSEPAE
+ YREIHVALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWTMVAELVET
+ SRLWGRIAARIEPEWVEPVAQHLIKRSYSEPHWERAQGAVMATEKVTVYGLPIVAARK
+ VNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDD
+ DTLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPN
+ FWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVDESGFEWQIPGLRRELVIALIK
+ SLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDALERELRRMTGVTVDREDWHWDQVP
+ EHLKITFRVVNDKNKKLQEGRSLAGLKNALKGKVQETLSAVADDGIEQSGLHIWSFGA
+ LPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQQQAMWCGLRRLLLLNIPSPI
+ KYLHEKLPNKAKLGLYFNPYGKVLELIDDCIACGVDKLIDANGGPVWSEAGFTALHEK
+ VRAGLNDTVVDIAKQVERILTTVFNINKRLKGRVDMSMALGLSDIKAQISGLVYRGFV
+ TGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVESVQQAWQQWINKLPPARR
+ EDDDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMDQITA"
+ misc_feature 1300702..1304517
+ /locus_tag="SARI_01345"
+ /note="ATP-dependent RNA helicase HrpA; Provisional;
+ Region: PRK11131"
+ /db_xref="CDD:182986"
+ misc_feature 1300903..1301319
+ /locus_tag="SARI_01345"
+ /note="DEAD-like helicases superfamily. A diverse family
+ of proteins involved in ATP-dependent RNA or DNA
+ unwinding. This domain contains the ATP-binding region;
+ Region: DEXDc; cd00046"
+ /db_xref="CDD:238005"
+ misc_feature 1300930..1300944
+ /locus_tag="SARI_01345"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238005"
+ misc_feature 1301212..1301223
+ /locus_tag="SARI_01345"
+ /note="putative Mg++ binding site [ion binding]; other
+ site"
+ /db_xref="CDD:238005"
+ misc_feature 1301407..1301856
+ /locus_tag="SARI_01345"
+ /note="Helicase superfamily c-terminal domain; associated
+ with DEXDc-, DEAD-, and DEAH-box proteins, yeast
+ initiation factor 4A, Ski2p, and Hepatitis C virus NS3
+ helicases; this domain is found in a wide variety of
+ helicases and helicase related proteins; may...; Region:
+ HELICc; cd00079"
+ /db_xref="CDD:238034"
+ misc_feature order(1301515..1301526,1301593..1301598,1301665..1301673)
+ /locus_tag="SARI_01345"
+ /note="nucleotide binding region [chemical binding]; other
+ site"
+ /db_xref="CDD:238034"
+ misc_feature order(1301689..1301691,1301806..1301808,1301818..1301820,
+ 1301827..1301829)
+ /locus_tag="SARI_01345"
+ /note="ATP-binding site [chemical binding]; other site"
+ /db_xref="CDD:238034"
+ misc_feature 1302013..1302300
+ /locus_tag="SARI_01345"
+ /note="Helicase associated domain (HA2); Region: HA2;
+ pfam04408"
+ /db_xref="CDD:218070"
+ misc_feature 1302418..1302720
+ /locus_tag="SARI_01345"
+ /note="Oligonucleotide/oligosaccharide-binding (OB)-fold;
+ Region: OB_NTP_bind; pfam07717"
+ /db_xref="CDD:219532"
+ misc_feature 1302754..1304517
+ /locus_tag="SARI_01345"
+ /note="Domain of unknown function (DUF3418); Region:
+ DUF3418; pfam11898"
+ /db_xref="CDD:221300"
+ gene 1304590..1305390
+ /locus_tag="SARI_01346"
+ CDS 1304590..1305390
+ /locus_tag="SARI_01346"
+ /inference="protein motif:HMMPfam:IPR003848"
+ /inference="similar to AA sequence:INSD:CAD01691.1"
+ /note="'COG: COG1434 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570388.1"
+ /db_xref="GI:161503276"
+ /db_xref="InterPro:IPR003848"
+ /translation="MNTTPFPALSAETLLAVNTVGQWLAQNDFSGEQPYSSDCVVLAG
+ NAVIPTIDAACRIAKAQGVPLLISGGIGHSTPFLYSAIARHPRYHTIRTTGRAEAAIL
+ ADIANQFWHIPAEKIWLEDQSTNCGENARFSCALLRQAKENINTAIVVQDPTMQRRTM
+ ATFRRVTNDDTDAPRWLSFPGFVPVLRHLNGGTRFADVEEGIWTVERYLSLIAGELPR
+ LRDDETGYGPRGKDFIIHVDIPRDIETAWQVLQADTTLRNALNQRALR"
+ misc_feature 1304590..1305276
+ /locus_tag="SARI_01346"
+ /note="Uncharacterized conserved protein [Function
+ unknown]; Region: COG1434"
+ /db_xref="CDD:224351"
+ misc_feature 1304701..1305111
+ /locus_tag="SARI_01346"
+ /note="YdcF-like. YdcF-like is a large family of mainly
+ bacterial proteins, with a few members found in fungi,
+ plants, and archaea. Escherichia coli YdcF has been shown
+ to bind S-adenosyl-L-methionine (AdoMet), but a
+ biochemical function has not been...; Region: YdcF-like;
+ cd06259"
+ /db_xref="CDD:99750"
+ misc_feature order(1304965..1304967,1304974..1304976,1305040..1305042,
+ 1305052..1305054,1305061..1305063)
+ /locus_tag="SARI_01346"
+ /note="putative active site [active]"
+ /db_xref="CDD:99750"
+ gene 1305507..1306037
+ /locus_tag="SARI_01347"
+ CDS 1305507..1306037
+ /locus_tag="SARI_01347"
+ /inference="protein motif:HMMPfam:IPR011577"
+ /inference="similar to AA sequence:REFSEQ:NP_460598.1"
+ /note="B-type di-heme cytochrome with a major
+ alpha-absorption peak at 561 nm and a minor peak at 555
+ nm"
+ /codon_start=1
+ /transl_table=11
+ /product="cytochrome b561"
+ /protein_id="YP_001570389.1"
+ /db_xref="GI:161503277"
+ /db_xref="InterPro:IPR011577"
+ /translation="MGNKYSGLQIGIHWLVFFLVIVAYAAMELRGFAPRSYRPWFNMT
+ HVSCGITILLLMVARLFIRLKYPTPPIVPRPKPMMTGMAHLGHLVIYLLFIALPVIGL
+ VMMYNRGNPWVAFGIAMPHAAEANFERVDMLKSWHVTLANLGYFVIGLHAIAALMHHY
+ FWKDNTLLRMMPRKRS"
+ misc_feature 1305507..1306034
+ /locus_tag="SARI_01347"
+ /note="cytochrome b561; Provisional; Region: PRK11513"
+ /db_xref="CDD:236921"
+ gene complement(1306118..1306183)
+ /locus_tag="SARI_01348"
+ misc_RNA complement(1306118..1306183)
+ /locus_tag="SARI_01348"
+ /product="RydC RNA"
+ /inference="nucleotide motif:Rfam:RF00505"
+ /note="Rfam score 75.61"
+ gene complement(1306304..1306966)
+ /locus_tag="SARI_01349"
+ CDS complement(1306304..1306966)
+ /locus_tag="SARI_01349"
+ /inference="protein motif:HMMPfam:IPR013217"
+ /inference="similar to AA sequence:REFSEQ:YP_216621.1"
+ /note="'KEGG: dar:Daro_3485 0.00060 probable
+ phosphatidylethanolamine N-methyltransferase K00551;
+ COG: COG0500 SAM-dependent methyltransferases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570390.1"
+ /db_xref="GI:161503278"
+ /db_xref="InterPro:IPR013217"
+ /translation="MKHTQQSGAKVYNSFTLSLYDWWVLNISNKYAWKCPTDTRLLPF
+ FLHHMGETHLDIGVGTGYYLKHAPATHAISLMDLNPDSLKIAASRVGETKIRAALQHD
+ IFDTFPADWHGRFDSVSMYYLLHCLPGEMTTKAKAIKNAGMALKPGGTLFGATILGKE
+ VTHNAFGKKLMAVYNKKGIFSNTNDSADTLRSVLDEHFAKVTVEQHGTVALFSATSPR
+ LS"
+ misc_feature complement(<1306496..>1306807)
+ /locus_tag="SARI_01349"
+ /note="SAM-dependent methyltransferases [Secondary
+ metabolites biosynthesis, transport, and catabolism /
+ General function prediction only]; Region: SmtA; COG0500"
+ /db_xref="CDD:223574"
+ misc_feature complement(1306511..1306807)
+ /locus_tag="SARI_01349"
+ /note="S-adenosylmethionine-dependent methyltransferases
+ (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
+ that use S-adenosyl-L-methionine (SAM or AdoMet) as a
+ substrate for methyltransfer, creating the product
+ S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
+ cd02440"
+ /db_xref="CDD:100107"
+ misc_feature complement(order(1306595..1306597,1306634..1306642,
+ 1306733..1306738,1306781..1306801))
+ /locus_tag="SARI_01349"
+ /note="S-adenosylmethionine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:100107"
+ gene complement(1307720..1309000)
+ /locus_tag="SARI_01350"
+ CDS complement(1307720..1309000)
+ /locus_tag="SARI_01350"
+ /inference="protein motif:HMMPfam:IPR010637"
+ /inference="protein motif:superfamily:IPR013830"
+ /inference="similar to AA sequence:REFSEQ:YP_216613.1"
+ /note="'KEGG: aha:AHA_3791 7.9e-22
+ phosphatidylcholine-sterol acyltransferase K00650;
+ COG: COG3240 Phospholipase/leciTHInase/hemolysin;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570391.1"
+ /db_xref="GI:161503279"
+ /db_xref="InterPro:IPR010637"
+ /db_xref="InterPro:IPR013830"
+ /translation="MISAKIFLFTVLYKQEVTMPFSVGQGYFTTSISAERFNAIKESS
+ STPEMSLWEKIKACFFSTYHADALECIFKLYHYEELNLTPVQVRGAYTKLRALASPGC
+ KDQFIIESQEQTDELIIKGDNNSILLSVKVECHSEAFSLAKEINKLYPKIKNTSLGDI
+ SRLVIFGDSLSDSMGRMFEKTHHMLPSYGQFYGGRFTNGFTWPEFLSSPQFLSKKMIN
+ FAEGGSTSASYSCFNCIGDFVSNTDRQIASYIPSSQDLAMFLLGANDYMTLHKDNIAM
+ VVEQQADDIEKIISEGVTNILVMGIPNLSSTPYAVHSDDKRKLEDESFAHNALLKKYV
+ TQLKEKYPQHRICYFETSDAFNQITAVANGIGYDTENAYTHHGYVHIPGTKDPLLDIS
+ PRYIFNDSVHPTQEIHNSFAIILENFIVNHYSNV"
+ misc_feature complement(<1308644..1308946)
+ /locus_tag="SARI_01350"
+ /note="Sif protein; Region: Sif; cl11505"
+ /db_xref="CDD:187080"
+ misc_feature complement(1307747..1308517)
+ /locus_tag="SARI_01350"
+ /note="Fatty acyltransferase-like subfamily of the SGNH
+ hydrolases, a diverse family of lipases and esterases. The
+ tertiary fold of the enzyme is substantially different
+ from that of the alpha/beta hydrolase family and unique
+ among all known hydrolases; its...; Region:
+ fatty_acyltransferase_like; cd01846"
+ /db_xref="CDD:238882"
+ misc_feature complement(order(1307795..1307797,1307804..1307806,
+ 1308209..1308211,1308332..1308334,1308494..1308496))
+ /locus_tag="SARI_01350"
+ /note="active site"
+ /db_xref="CDD:238882"
+ misc_feature complement(order(1307795..1307797,1307804..1307806,
+ 1308494..1308496))
+ /locus_tag="SARI_01350"
+ /note="catalytic triad [active]"
+ /db_xref="CDD:238882"
+ misc_feature complement(order(1308209..1308211,1308332..1308334,
+ 1308494..1308496))
+ /locus_tag="SARI_01350"
+ /note="oxyanion hole [active]"
+ /db_xref="CDD:238882"
+ gene 1309422..1310138
+ /locus_tag="SARI_01351"
+ CDS 1309422..1310138
+ /locus_tag="SARI_01351"
+ /inference="similar to AA sequence:INSD:AAL20548.1"
+ /note="'COG: NOG06184 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570392.1"
+ /db_xref="GI:161503280"
+ /translation="MSDDSIIKNSSMLLAYLGGLGWGSAYFYGWGVSAYYGFPWWYVG
+ VGPDNIARSLFHAISLMAIFIVAWGVGILLFFVVKQKAHINNLSFLRLFLAAISFFIP
+ IVIEFSILTNSFLWELFFVVLLVALFLSVGIRFYSKLMPVICFTQLSWVRKHCFTIIM
+ VGFIIYFWLFSFFVGLYKPQLKKEYEMILYDGGWYYVLARYHDSFVLSKSFTKDNNRF
+ IIFRPEDGHSYEIALVKVRL"
+ gene 1310560..1310730
+ /locus_tag="SARI_01352"
+ CDS 1310560..1310730
+ /locus_tag="SARI_01352"
+ /note="'COG: COG2801 Transposase and inactivated
+ derivatives;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570393.1"
+ /db_xref="GI:161503281"
+ /translation="MSLSRVQYPGDEPMLRVACSGWYAWRNRRLRVNARQQFRLLCDA
+ AVSTAFHQGKQR"
+ gene complement(1311207..1311344)
+ /locus_tag="SARI_01354"
+ CDS complement(1311207..1311344)
+ /locus_tag="SARI_01354"
+ /note="'Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570395.1"
+ /db_xref="GI:161503283"
+ /translation="MVHLLLFNMIILLDLVQVTHHHFQKQSVIAATLTILTILTILTI
+ K"
+ gene 1312518..1312793
+ /locus_tag="SARI_01355"
+ CDS 1312518..1312793
+ /locus_tag="SARI_01355"
+ /inference="protein motif:HMMPfam:IPR003735"
+ /inference="similar to AA sequence:INSD:AAL20546.1"
+ /note="'COG: COG1937 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570396.1"
+ /db_xref="GI:161503284"
+ /db_xref="InterPro:IPR003735"
+ /translation="MPHSPEDKKRILTRVRRIRGQVEALERALESGESCLAILQQIAA
+ VRGASNGLMSEMVEIHLKDELVSGETTPDQRAVRMAEIGHLLRAYLK"
+ misc_feature 1312524..1312787
+ /locus_tag="SARI_01355"
+ /note="Transcriptional regulators RcnR and FrmR, and
+ related domains; this domain family was previously known
+ as part of DUF156; Region: RcnR-FrmR-like_DUF156; cd10153"
+ /db_xref="CDD:197388"
+ misc_feature order(1312524..1312526,1312620..1312622,1312695..1312697,
+ 1312707..1312709)
+ /locus_tag="SARI_01355"
+ /note="putative metal binding site [ion binding]; other
+ site"
+ /db_xref="CDD:197388"
+ misc_feature order(1312539..1312541,1312548..1312553,1312560..1312565,
+ 1312572..1312574,1312581..1312586,1312590..1312595,
+ 1312602..1312613,1312617..1312625,1312629..1312637,
+ 1312641..1312646,1312650..1312655,1312662..1312667,
+ 1312674..1312676,1312683..1312685,1312695..1312697,
+ 1312758..1312760,1312767..1312778)
+ /locus_tag="SARI_01355"
+ /note="putative homodimer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:197388"
+ misc_feature order(1312539..1312541,1312548..1312553,1312560..1312565,
+ 1312572..1312574,1312581..1312586,1312590..1312595,
+ 1312602..1312613,1312617..1312625,1312629..1312637,
+ 1312641..1312646,1312650..1312655,1312662..1312667,
+ 1312674..1312679,1312683..1312691,1312695..1312703,
+ 1312710..1312712,1312740..1312745,1312749..1312778)
+ /locus_tag="SARI_01355"
+ /note="putative homotetramer interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:197388"
+ misc_feature order(1312677..1312679,1312686..1312691,1312698..1312703,
+ 1312707..1312712,1312740..1312745,1312749..1312757,
+ 1312761..1312766)
+ /locus_tag="SARI_01355"
+ /note="putative homodimer-homodimer interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:197388"
+ misc_feature order(1312695..1312697,1312758..1312760)
+ /locus_tag="SARI_01355"
+ /note="putative allosteric switch controlling residues;
+ other site"
+ /db_xref="CDD:197388"
+ gene 1312825..1313943
+ /locus_tag="SARI_01356"
+ CDS 1312825..1313943
+ /locus_tag="SARI_01356"
+ /inference="protein motif:HMMPanther:IPR002085"
+ /inference="protein motif:HMMPfam:IPR013149"
+ /inference="protein motif:HMMPfam:IPR013154"
+ /inference="protein motif:ScanRegExp:IPR002328"
+ /inference="protein motif:superfamily:IPR011032"
+ /inference="similar to AA sequence:INSD:AAL20545.1"
+ /note="'KEGG: stm:STM1627 5.0e-201 alcohol dehydrogenase
+ class III K00001:K00121;
+ COG: COG1062 Zn-dependent alcohol dehydrogenases, class
+ III;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570397.1"
+ /db_xref="GI:161503285"
+ /db_xref="InterPro:IPR002085"
+ /db_xref="InterPro:IPR002328"
+ /db_xref="InterPro:IPR011032"
+ /db_xref="InterPro:IPR013149"
+ /db_xref="InterPro:IPR013154"
+ /translation="MKSRAAVAFAPGKPLKIVEIDVAPPKKGEVLVKITHTGVCHTDA
+ FTLSGDDPEGVFPAVLGHEGGGVVVEVGEGVTSLKPGDHVIPLYTAECGECKFCKSGK
+ TNLCQAVRATQGKGLMPDGTTRFSYNGEPVYHYMGTSTFSEYTVCAEISLAKVNPQAP
+ LDKVCLLGCGVTTGIGAVHNTAKVKAGDTVAVFGLGGIGLAVIQGAVQAKAGRILAVD
+ TNPEKFTLAGEMGATDFINPNDYDKPIQDVIVELTDGGVDFSFECIGNVNVMRAALEC
+ CHKGWGESIVIGVAGAGQEIKTRPFQLVTGRVWRGSAFGGVKGRTQLPGMVEDAMNGN
+ IRLDPFITHRLPLEQINDAFELMHQGKSIRTVIHFGDK"
+ misc_feature 1312825..1313928
+ /locus_tag="SARI_01356"
+ /note="class III alcohol dehydrogenases; Region:
+ alcohol_DH_class_III; cd08300"
+ /db_xref="CDD:176260"
+ misc_feature 1312828..1313931
+ /locus_tag="SARI_01356"
+ /note="S-(hydroxymethyl)glutathione dehydrogenase/class
+ III alcohol dehydrogenase; Region: adh_III_F_hyde;
+ TIGR02818"
+ /db_xref="CDD:131865"
+ misc_feature order(1312942..1312944,1312948..1312950,1312975..1312983,
+ 1313008..1313010,1313086..1313091,1313329..1313331,
+ 1313689..1313691,1313761..1313763)
+ /locus_tag="SARI_01356"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:176260"
+ misc_feature order(1312942..1312944,1313008..1313013,1313329..1313331)
+ /locus_tag="SARI_01356"
+ /note="catalytic Zn binding site [ion binding]; other
+ site"
+ /db_xref="CDD:176260"
+ misc_feature order(1312945..1312950,1313329..1313331,1313341..1313343,
+ 1313404..1313418,1313476..1313481,1313491..1313493,
+ 1313611..1313616,1313626..1313631,1313683..1313688,
+ 1313758..1313766,1313914..1313916)
+ /locus_tag="SARI_01356"
+ /note="NAD binding site [chemical binding]; other site"
+ /db_xref="CDD:176260"
+ misc_feature order(1313098..1313100,1313107..1313109,1313116..1313118,
+ 1313140..1313142)
+ /locus_tag="SARI_01356"
+ /note="structural Zn binding site [ion binding]; other
+ site"
+ /db_xref="CDD:176260"
+ misc_feature order(1313110..1313115,1313122..1313124,1313128..1313133,
+ 1313137..1313139,1313143..1313145,1313584..1313586,
+ 1313599..1313601,1313632..1313637,1313656..1313667,
+ 1313692..1313694,1313701..1313724,1313731..1313739,
+ 1313746..1313763)
+ /locus_tag="SARI_01356"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:176260"
+ gene 1314113..1315738
+ /locus_tag="SARI_01357"
+ CDS 1314113..1315738
+ /locus_tag="SARI_01357"
+ /inference="protein motif:HMMPfam:IPR003122"
+ /inference="protein motif:HMMPfam:IPR003660"
+ /inference="protein motif:HMMPfam:IPR004089"
+ /inference="protein motif:HMMSmart:IPR003122"
+ /inference="protein motif:HMMSmart:IPR003660"
+ /inference="protein motif:HMMSmart:IPR004089"
+ /inference="protein motif:ScanRegExp:IPR004091"
+ /inference="similar to AA sequence:REFSEQ:YP_216608.1"
+ /note="'KEGG: bxe:Bxe_C0521 0.00014 multi sensor hybrid
+ histidine kinase;
+ COG: COG0840 Methyl-accepting chemotaxis protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570398.1"
+ /db_xref="GI:161503286"
+ /db_xref="InterPro:IPR003122"
+ /db_xref="InterPro:IPR003660"
+ /db_xref="InterPro:IPR004089"
+ /db_xref="InterPro:IPR004091"
+ /translation="MGNTFSMQASHKLGFLHHIRLVPLFSSILGGILLLFALSAGLAG
+ YFLLQADRDQRDVTDEIQVRMGLSNSANHLRTARINMIHAGAASRIAEMDEMKANIAA
+ AETRIKQSQDGFNAYMSRAVKTPADDALDNELNARYTAYINGLQPMLKFAKNGMFEAI
+ INHENEQAKQLDAAYNHVLLKAIKLRTERARLLSEQAYQRTRLGMMVMIGAFTLALVL
+ TLMTFIVLRHTVIQPLQRAASRIERIAAGDLTMADEPAGRSEIGRLSLHLQQMQYALQ
+ QTVGTVRQGAEEIYRGTSEITVGNTDLSSRTEEQAAAIEQTAASMEQLTATVKQNADN
+ AHHASKLAEDASGKASRGGQMISVVVQTMGNISTSSKKISEITAVINSIAFQTNILAL
+ NAAVEAARAGEQGRGFAVVASEVRTLASRSAQAAKEIEGLIGESVSLIEQGSEDVIAA
+ GSTMNEIVDAVKRVTDIMLDIAAASDEQSRGIVQVSQAISEMDKVTQQNASLVEEASA
+ AAVSLEEQAARLTQAVDAFRLQNTGTATHSTFL"
+ misc_feature 1314293..1314670
+ /locus_tag="SARI_01357"
+ /note="ligand binding domain of Tar- and Tsr-related
+ chemoreceptors; Region: Tar_Tsr_LBD; cd00181"
+ /db_xref="CDD:206638"
+ misc_feature order(1314293..1314295,1314323..1314328,1314335..1314340,
+ 1314344..1314349,1314356..1314361,1314368..1314373,
+ 1314377..1314382,1314599..1314604,1314608..1314610,
+ 1314614..1314619,1314626..1314628)
+ /locus_tag="SARI_01357"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:206638"
+ misc_feature order(1314344..1314346,1314359..1314361,1314371..1314373,
+ 1314599..1314604,1314608..1314610,1314614..1314616)
+ /locus_tag="SARI_01357"
+ /note="ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:206638"
+ misc_feature 1314554..1315699
+ /locus_tag="SARI_01357"
+ /note="Methyl-accepting chemotaxis protein [Cell motility
+ and secretion / Signal transduction mechanisms]; Region:
+ Tar; COG0840"
+ /db_xref="CDD:223910"
+ misc_feature 1314800..1314943
+ /locus_tag="SARI_01357"
+ /note="Histidine kinase, Adenylyl cyclase,
+ Methyl-accepting protein, and Phosphatase (HAMP) domain.
+ HAMP is a signaling domain which occurs in a wide variety
+ of signaling proteins, many of which are bacterial. The
+ HAMP domain consists of two alpha helices...; Region:
+ HAMP; cd06225"
+ /db_xref="CDD:100122"
+ misc_feature order(1314800..1314805,1314812..1314817,1314821..1314826,
+ 1314833..1314838,1314842..1314844,1314890..1314895,
+ 1314899..1314904,1314911..1314916,1314920..1314925,
+ 1314932..1314937)
+ /locus_tag="SARI_01357"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:100122"
+ misc_feature 1315070..1315609
+ /locus_tag="SARI_01357"
+ /note="Methyl-accepting chemotaxis protein (MCP),
+ signaling domain; Region: MCP_signal; cd11386"
+ /db_xref="CDD:206779"
+ misc_feature order(1315070..1315075,1315082..1315084,1315091..1315096,
+ 1315100..1315105,1315112..1315114,1315121..1315126,
+ 1315133..1315135,1315142..1315147,1315154..1315159,
+ 1315166..1315168,1315175..1315180,1315184..1315189,
+ 1315199..1315201,1315205..1315210,1315217..1315219,
+ 1315226..1315231,1315238..1315243,1315250..1315252,
+ 1315259..1315261,1315268..1315273,1315280..1315282,
+ 1315292..1315294,1315301..1315303,1315322..1315324,
+ 1315334..1315336,1315343..1315345,1315352..1315357,
+ 1315364..1315366,1315373..1315378,1315385..1315390,
+ 1315394..1315399,1315406..1315411,1315448..1315453,
+ 1315460..1315462,1315469..1315474,1315481..1315483,
+ 1315490..1315495,1315499..1315504,1315511..1315516,
+ 1315523..1315525,1315532..1315537,1315544..1315546,
+ 1315553..1315558,1315562..1315567,1315574..1315579,
+ 1315583..1315588,1315595..1315597,1315604..1315609)
+ /locus_tag="SARI_01357"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:206779"
+ misc_feature 1315268..1315369
+ /locus_tag="SARI_01357"
+ /note="putative CheW interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:206779"
+ gene complement(1315799..1316722)
+ /locus_tag="SARI_01358"
+ CDS complement(1315799..1316722)
+ /locus_tag="SARI_01358"
+ /inference="protein motif:FPrintScan:IPR000847"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="protein motif:HMMPfam:IPR005119"
+ /inference="similar to AA sequence:REFSEQ:NP_460584.1"
+ /note="'KEGG: shn:Shewana3_3435 0.00016 transcriptional
+ regulator, LysR family K06022;
+ COG: COG0583 Transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570399.1"
+ /db_xref="GI:161503287"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR005119"
+ /db_xref="InterPro:IPR011991"
+ /translation="MEKNGLFSQRIRLRHLHTFVAVAQQGTLGRAAETLNLSQPALSK
+ TLNELEQLTGTRLFERGRLGAQLTVPGEQFLTHAVKVLDALNTAGQALNRKEDASADV
+ VRIGALPTAALGILPAVIGRFHQQQKSTSLQVATMNNTMLLAGLKSGEIDLGIGRLSD
+ PELMSGLNYELLFFESLKLVVRPGHPLLQETITLSRVMEWPVVVSPKGTVPRQNAEAL
+ LQSQGCEMPTGCTETLSASLSRQLTVDYDYVWFVPSGAVKEDLRHATLVSLPVPTQDA
+ GEPIGILTRVDIPLSTGAQTLIAAIRKSMPL"
+ misc_feature complement(1315817..1316698)
+ /locus_tag="SARI_01358"
+ /note="pca operon transcription factor PcaQ; Region:
+ TF_pcaQ; TIGR02424"
+ /db_xref="CDD:233862"
+ misc_feature complement(1316507..1316686)
+ /locus_tag="SARI_01358"
+ /note="Bacterial regulatory helix-turn-helix protein, lysR
+ family; Region: HTH_1; pfam00126"
+ /db_xref="CDD:215735"
+ misc_feature complement(1315820..1316419)
+ /locus_tag="SARI_01358"
+ /note="The substrate binding domain of LysR-type
+ transcriptional regulators (LTTRs), a member of the type 2
+ periplasmic binding fold protein superfamily; Region:
+ PBP2_LTTR_substrate; cl11398"
+ /db_xref="CDD:245600"
+ misc_feature complement(order(1315988..1315993,1315997..1316002,
+ 1316018..1316035,1316315..1316335,1316339..1316341,
+ 1316351..1316353,1316360..1316365,1316369..1316374))
+ /locus_tag="SARI_01358"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:176102"
+ gene 1316977..1318371
+ /locus_tag="SARI_01359"
+ CDS 1316977..1318371
+ /locus_tag="SARI_01359"
+ /inference="protein motif:HMMPfam:IPR009770"
+ /inference="similar to AA sequence:INSD:AAL20542.1"
+ /note="'COG: COG5383 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570400.1"
+ /db_xref="GI:161503288"
+ /db_xref="InterPro:IPR009770"
+ /translation="MGGVFYTPGNIHWRHDIMANTITADEIREHFSQAMSAMYQQEVP
+ QYGTLLELVADVNLAVLENSPKLHEQLANADELARLNVERHGAIRVGTAEELSTLRRI
+ FAIMGMYPVSYYDLSQAGVPVHSTAFRPIDDASLSRNPFRVFTSLLRLELIEDAALRQ
+ RAAEILSQRDIFTSRCRQLLDEYDTQGGFNPAQAEEFVRETLETFRWHRQATVDEETY
+ LALHREHRLIADVVCFPGCHINHLTPRTLDIDRVQAMMPEYGITPKILIEGPPRRDVP
+ VLLRQTSFKALEEQVFFVGEKQGTHTARFGEIEQRGVALTPKGRRLYDELLQKAGTGK
+ DNFTHQLHLQEAFNAFPDSEFLLRQQGLAWFRYRLTPSGEAHRQAIHPGDDPQPLIER
+ GWVIAQPITYEDFLPVSAAGIFQSNLGNETQVRSHGNASRDAFEQALGCSVLDEFSLY
+ REAEERSKRRCGLL"
+ misc_feature 1317028..1317786
+ /locus_tag="SARI_01359"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG5383"
+ /db_xref="CDD:227673"
+ misc_feature <1317799..1318368
+ /locus_tag="SARI_01359"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG5383"
+ /db_xref="CDD:227673"
+ gene 1318421..1319929
+ /locus_tag="SARI_01360"
+ CDS 1318421..1319929
+ /locus_tag="SARI_01360"
+ /inference="protein motif:FPrintScan:IPR000997"
+ /inference="protein motif:HMMPanther:IPR002018"
+ /inference="protein motif:HMMPfam:IPR002018"
+ /inference="protein motif:ScanRegExp:IPR002018"
+ /inference="similar to AA sequence:INSD:AAL20541.1"
+ /note="'KEGG: stm:STM1623 2.3e-258 putative
+ carboxylesterase K03927;
+ COG: COG2272 Carboxylesterase type B;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570401.1"
+ /db_xref="GI:161503289"
+ /db_xref="InterPro:IPR000997"
+ /db_xref="InterPro:IPR002018"
+ /translation="MLNPSIPLVATRHGKIVGVVQEDIHIWRGIPYAAPPTGELRWRA
+ PQPVTPWPDVRLADCFSCASWQDITRCREFGGGDPGNFSEDCLYLNVWAPAIRHEPLP
+ VMVWLHGGGYTIGAGSLPPYDGHALANRGAIVVTVNYRLGHLGFFAHPALEGEEAECI
+ HNFALLDQIAALRWVQDNIVAFGGDTQNVTLFGESAGARSVLSLMASPLAKGLFHKAI
+ IQSGYTLPDTPREAALKNGVALAEHVGLTNATAEQLRALPAGTFWPLDAPFKIAPTPI
+ SGDAVLPQPMLETFFAAKQHPMPVIVGSNSDEASVLAVFGIDIAGQIQKLRRERRVGL
+ GLIRLLYNGVKGDEALGRLVCRDMAFTTLGYVVMQAQQRIGEPCWRYWFDYVAEAERD
+ TYANGAWHGNEIPYVFDTLMQTEPTCHYVNENDLAFALKVADYWVNFARHASRNCDML
+ HGPVCWPASIRGRDRLLRIGLNKLAGFKVENRFMRTRLALFKRVMKHHVSLE"
+ misc_feature 1318433..1319911
+ /locus_tag="SARI_01360"
+ /note="Carboxylesterase type B [Lipid metabolism]; Region:
+ PnbA; COG2272"
+ /db_xref="CDD:225181"
+ misc_feature 1318442..1319794
+ /locus_tag="SARI_01360"
+ /note="Esterases and lipases (includes fungal lipases,
+ cholinesterases, etc.) These enzymes act on carboxylic
+ esters (EC: 3.1.1.-). The catalytic apparatus involves
+ three residues (catalytic triad): a serine, a glutamate or
+ aspartate and a histidine.These...; Region:
+ Esterase_lipase; cd00312"
+ /db_xref="CDD:238191"
+ misc_feature order(1318745..1318753,1319000..1319008,1319015..1319017,
+ 1319417..1319419,1319483..1319485,1319621..1319623,
+ 1319630..1319632)
+ /locus_tag="SARI_01360"
+ /note="substrate binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:238191"
+ misc_feature order(1319003..1319005,1319342..1319344,1319618..1319620)
+ /locus_tag="SARI_01360"
+ /note="catalytic triad [active]"
+ /db_xref="CDD:238191"
+ gene 1320179..1321804
+ /gene="mdoD"
+ /locus_tag="SARI_01361"
+ CDS 1320179..1321804
+ /gene="mdoD"
+ /locus_tag="SARI_01361"
+ /inference="protein motif:HMMPfam:IPR007444"
+ /inference="similar to AA sequence:INSD:AAL20540.1"
+ /note="involved in the control of the structural glucose
+ backbone of osmoregulated periplasmic glucans"
+ /codon_start=1
+ /transl_table=11
+ /product="glucan biosynthesis protein D"
+ /protein_id="YP_001570402.1"
+ /db_xref="GI:161503290"
+ /db_xref="InterPro:IPR007444"
+ /translation="MAMAAVCGSSGIASLFSQAAFAAESDIADGKIVRFDFPGLQSMA
+ QALAKKPWDGAPRPLPDTLANLTPQAYNSIQYDAAYSLWNNVANRQLDIQFFHVGMGF
+ RRRVRMFSVDTTTHLAREIHFRPELFKYNDAGVDTAQLEGQTDLGFAGFRVFKAPELA
+ RRDIVSFLGASYFRAVDDTYQYGLSARGLAIDTYTDGQEEFPDFTAFWFDTVKPGDTT
+ FTVYALLDSASVTGAYKFVIHCEKSQVIMDVENHLYARKDIKQLGIAPMTSMFSCGNN
+ ERRVCDTIHPQIHDSDRLAMWRGNGEWICRPLNNPQKLQFNAYMDDNPKGFGLLQLDR
+ DFSHYQDVMGWYNKRPSLWVEPRSKWGKGAVGLMEIPTTGETLDNVVCFWQPEKAVKA
+ GDTLAFAYRLYWSAQPPVQSPLARVMATRTGMGGFPEGWAPGEHYPDKWARRFAIDFV
+ GGDLKAAAPKGIEPVITLSSGEAKQIEILYVEPFDGYRIQFDWYPTSDSAAPVDMRMF
+ LRCQGKAVSETWLYQYFPPAPDKRRYVDDRIMR"
+ misc_feature 1320179..1321774
+ /gene="mdoD"
+ /locus_tag="SARI_01361"
+ /note="Periplasmic glucans biosynthesis protein [Inorganic
+ ion transport and metabolism]; Region: MdoG; COG3131"
+ /db_xref="CDD:225673"
+ misc_feature 1320281..1321738
+ /gene="mdoD"
+ /locus_tag="SARI_01361"
+ /note="glucan biosynthesis protein D; Provisional; Region:
+ mdoD; PRK13273"
+ /db_xref="CDD:237327"
+ gene complement(1321907..1322161)
+ /locus_tag="SARI_01362"
+ CDS complement(1321907..1322161)
+ /locus_tag="SARI_01362"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_007412659.1"
+ /db_xref="GI:448236225"
+ /translation="MIDLTAEQVHDYACRFPLTENGDAQLLQGCYDYMDAFKRVMDSA
+ SKVQMDYICLQYHGYFRFAKWMERLAQGIADGVIEVPKDH"
+ gene complement(1322218..1322634)
+ /locus_tag="SARI_01363"
+ CDS complement(1322218..1322634)
+ /locus_tag="SARI_01363"
+ /inference="protein motif:HMMPfam:IPR008514"
+ /inference="similar to AA sequence:REFSEQ:ZP_01553897.1"
+ /note="'COG: COG3157 Hemolysin-coregulated protein
+ (uncharacterized);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570404.1"
+ /db_xref="GI:161503292"
+ /db_xref="InterPro:IPR008514"
+ /translation="MMPLRLGSIELKSFSHGVTIPVDPSWGKLTGTRVHRPITIVKEF
+ DQTTPLLYRAVCEGRTMKKATIKMYRILESGIEAEYFNIILENVKFTTVAPFLSPNGM
+ SSTHLETLELRYEAITWKYTEGNIIYRDSWNDRCCA"
+ misc_feature complement(1322230..>1322616)
+ /locus_tag="SARI_01363"
+ /note="Protein of unknown function (DUF796); Region:
+ DUF796; cl01226"
+ /db_xref="CDD:242377"
+ gene complement(1322833..1323069)
+ /locus_tag="SARI_01365"
+ CDS complement(1322833..1323069)
+ /locus_tag="SARI_01365"
+ /inference="protein motif:HMMPfam:IPR008007"
+ /inference="similar to AA sequence:INSD:AAL20530.1"
+ /note="'COG: COG1363 Cellulase M and related proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570405.1"
+ /db_xref="GI:161503294"
+ /db_xref="InterPro:IPR008007"
+ /translation="MLVNHGVGITCLNYHGRGTLAGLITPPRLLRMLEMTAHENSIPV
+ HHPHRIPSGTGVTALVTFLAGTPQVAAAKASAFC"
+ misc_feature complement(1322869..>1323057)
+ /locus_tag="SARI_01365"
+ /note="M42 glutamyl aminopeptidase; Region: Peptidase_M42;
+ cl17262"
+ /db_xref="CDD:247816"
+ gene 1322932..1323279
+ /locus_tag="SARI_01364"
+ CDS 1322932..1323279
+ /locus_tag="SARI_01364"
+ /note="'KEGG: nar:Saro_2593 0.0073 propionyl-CoA
+ carboxylase K01964;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570406.1"
+ /db_xref="GI:161503293"
+ /translation="MVNGNTIFVRSHLQHPQQTRRRNKPCQRTASVIVQAGDADAVVD
+ QHIRVILQVRRVAGWGDINPYRQIGPPTRSKRKKPEGSILRTIKPTSSICAKNYQAKS
+ VRFVAAITGDEVA"
+ gene complement(1323202..1323423)
+ /locus_tag="SARI_01366"
+ CDS complement(1323202..1323423)
+ /locus_tag="SARI_01366"
+ /inference="similar to AA sequence:INSD:AAL20530.1"
+ /note="'KEGG: mja:MJ0555 0.0034 endoglucanase K01179;
+ COG: COG1363 Cellulase M and related proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570407.1"
+ /db_xref="GI:161503295"
+ /translation="METPMIFSAQETLFSLLRLNGISGHESSIADVMQRAFERQAKDV
+ WRDRSGNLVACYGSDKPDALRLIIFCAYG"
+ misc_feature complement(<1323217..1323393)
+ /locus_tag="SARI_01366"
+ /note="Zinc peptidases M18, M20, M28, and M42; Region:
+ Zinc_peptidase_like; cl14876"
+ /db_xref="CDD:246748"
+ gene 1323626..1324168
+ /locus_tag="SARI_01367"
+ CDS 1323626..1324168
+ /locus_tag="SARI_01367"
+ /inference="protein motif:HMMPfam:IPR000182"
+ /inference="similar to AA sequence:INSD:CAD01714.1"
+ /note="'KEGG: sty:STY1453 4.1e-87 rimL;
+ ribosomal-protein-serine acetyltransferase K03817;
+ COG: COG1670 Acetyltransferases, including N-acetylases of
+ ribosomal proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="ribosomal-protein-L7/L12-serine
+ acetyltransferase"
+ /protein_id="YP_001570408.1"
+ /db_xref="GI:161503296"
+ /db_xref="InterPro:IPR000182"
+ /translation="MMAEIIPVNATLKLRAADESHVPALHQLVLKNKAWLQQSLDWPQ
+ YVTSQDETCKYVQGNMLLHQRGYAKMYLIFCQDELAGVLSFNVIEPLNKTAYIGYWLD
+ ESLQGQGVISQSLQALMTHYARRGDIRRFVIKCRVDNHASNAVARRNHFTLEGCMKQA
+ EYLNGDYHDVNMYARIMDTV"
+ misc_feature 1323659..1324081
+ /locus_tag="SARI_01367"
+ /note="Acetyltransferase (GNAT) domain; Region:
+ Acetyltransf_3; pfam13302"
+ /db_xref="CDD:222034"
+ misc_feature 1323833..1324024
+ /locus_tag="SARI_01367"
+ /note="N-Acyltransferase superfamily: Various enzymes that
+ characteristically catalyze the transfer of an acyl group
+ to a substrate; Region: NAT_SF; cd04301"
+ /db_xref="CDD:173926"
+ misc_feature order(1323923..1323928,1323956..1323961)
+ /locus_tag="SARI_01367"
+ /note="Coenzyme A binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:173926"
+ gene complement(1324168..1325146)
+ /locus_tag="SARI_01368"
+ /note="Pseudogene compared to gi|16764954|ref|NP_460569.1|
+ putative nucleoside-diphosphate-sugar pyrophosphorylase
+ [Salmonella typhimurium LT2]"
+ gene 1325253..1326266
+ /locus_tag="SARI_01369"
+ CDS 1325253..1326266
+ /locus_tag="SARI_01369"
+ /inference="protein motif:HMMPfam:IPR004695"
+ /inference="protein motif:HMMTigr:IPR011552"
+ /inference="similar to AA sequence:REFSEQ:NP_460568.1"
+ /note="'COG: COG1275 Tellurite resistance protein and
+ related permeases;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="potassium-tellurite ethidium and proflavin
+ transporter"
+ /protein_id="YP_001570409.1"
+ /db_xref="GI:161503297"
+ /db_xref="InterPro:IPR004695"
+ /db_xref="InterPro:IPR011552"
+ /translation="MRNHKQRDRVLNLPAGYFGIVLGTIGMGFAWRYASQIWAISHWP
+ GDIMVILAMIIWALLTLAFLSRLVRFPHSVMAEVRHPVMSSFVSLFPATTMLVAIGFV
+ PWYRPLAVALFSVGVVIQLAYAAWQTAGLWRGAHPEEATTPGLYLPTVANNFISAMAC
+ GALGYNDAGLVFLGAGVFSWLSLEPVILQRLRSCGELPAVLRTSLGIQLAPALVACSA
+ WLSVNGGEGDTLAKMLFGYGLLQLLFMLRLMPWYLSQPFNASFWSFSFGVSALATTGL
+ HLGHGSESGLFHILAVPLFIFTNAIIALLLVRTFLLLVQGKLLIRTERAALLKTEEKN
+ DRS"
+ misc_feature 1325265..1326161
+ /locus_tag="SARI_01369"
+ /note="Tellurite resistance protein and related permeases
+ [Inorganic ion transport and metabolism]; Region: TehA;
+ COG1275"
+ /db_xref="CDD:224194"
+ misc_feature 1325292..1326161
+ /locus_tag="SARI_01369"
+ /note="Tellurite-resistance/Dicarboxylate Transporter
+ (TDT) family includes TehA protein; Region: TDT_TehA;
+ cd09324"
+ /db_xref="CDD:187764"
+ misc_feature 1326048..1326050
+ /locus_tag="SARI_01369"
+ /note="gating phenylalanine in ion channel; other site"
+ /db_xref="CDD:187764"
+ gene 1326253..1326849
+ /locus_tag="SARI_01370"
+ CDS 1326253..1326849
+ /locus_tag="SARI_01370"
+ /inference="protein motif:HMMPfam:IPR004537"
+ /inference="protein motif:HMMTigr:IPR004537"
+ /inference="similar to AA sequence:INSD:AAX65511.1"
+ /note="with TehA confers resistance to tellurite"
+ /codon_start=1
+ /transl_table=11
+ /product="tellurite resistance protein TehB"
+ /protein_id="YP_001570410.1"
+ /db_xref="GI:161503298"
+ /db_xref="InterPro:IPR004537"
+ /translation="MTVRDENYFTEKYGLARTHSDVLAAAKVVAPGRTLDLGCGNGRN
+ SLFLAANGYDVTAWDKNPVSMANLEHIKAAEGLDNLQTKIVDLNTLTFDGEYDFILST
+ VVMMFLEVQTIPGLITNMQRCTKPGGYNLIVAAMDTPDFPCTVGFPFAFKEGELRRYY
+ EGWEMLKYNEDVGELHRTDENGNRIKLRFATMLARKTI"
+ misc_feature 1326253..1326843
+ /locus_tag="SARI_01370"
+ /note="tellurite resistance protein TehB; Provisional;
+ Region: PRK11207"
+ /db_xref="CDD:183040"
+ misc_feature 1326355..1326639
+ /locus_tag="SARI_01370"
+ /note="S-adenosylmethionine-dependent methyltransferases
+ (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
+ that use S-adenosyl-L-methionine (SAM or AdoMet) as a
+ substrate for methyltransfer, creating the product
+ S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
+ cd02440"
+ /db_xref="CDD:100107"
+ misc_feature order(1326361..1326381,1326427..1326432,1326505..1326513,
+ 1326556..1326558)
+ /locus_tag="SARI_01370"
+ /note="S-adenosylmethionine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:100107"
+ gene 1327007..1327672
+ /locus_tag="SARI_01371"
+ CDS 1327007..1327672
+ /locus_tag="SARI_01371"
+ /inference="similar to AA sequence:REFSEQ:NP_460566.1"
+ /note="'COG: NOG06284 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570411.1"
+ /db_xref="GI:161503299"
+ /translation="MRHTLFKVAVLTGLLALSGCASKVTQPDKYSGFLKNYSDLKETT
+ SPTGKPVLRWVDPKFNDSNYDSIVYNPITYYPVPKPTTQVGQQVLDKLLAYTNTKVKS
+ AIEQRKPLVTTPGPRSLIFRGAITGVDTSKEGLQFYEVIPVALIVAGTQMATGHRTMD
+ THLYFEGELIDAATNKPVIKVVRQGEGEDLSNSSTPMAFETLKQVVDDMATDTTMFDV
+ NKK"
+ misc_feature 1327049..1327651
+ /locus_tag="SARI_01371"
+ /note="Protein of unknown function (DUF3313); Region:
+ DUF3313; pfam11769"
+ /db_xref="CDD:221214"
+ gene complement(1327864..1328097)
+ /locus_tag="SARI_01372"
+ CDS complement(1327864..1328097)
+ /locus_tag="SARI_01372"
+ /inference="protein motif:HMMPfam:IPR004711"
+ /inference="similar to AA sequence:REFSEQ:NP_460565.1"
+ /note="'COG: COG3135 Uncharacterized protein involved in
+ benzoate metabolism;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570412.1"
+ /db_xref="GI:161503300"
+ /db_xref="InterPro:IPR004711"
+ /translation="MIFTGLLALLLSPFGVYSICIAAITDDICQIPEARPEPKHRWLA
+ ATATGVFYLLAGLALLSTISGSLILGAYSRKRA"
+ misc_feature complement(<1327942..>1328097)
+ /locus_tag="SARI_01372"
+ /note="benzoate transporter; Region: benE; TIGR00843"
+ /db_xref="CDD:129923"
+ gene 1328229..1328597
+ /locus_tag="SARI_01373"
+ CDS 1328229..1328597
+ /locus_tag="SARI_01373"
+ /inference="protein motif:HMMPfam:IPR013096"
+ /inference="protein motif:superfamily:IPR011051"
+ /inference="similar to AA sequence:REFSEQ:NP_455892.1"
+ /note="'COG: COG1396 Predicted transcriptional regulators;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570413.1"
+ /db_xref="GI:161503301"
+ /db_xref="InterPro:IPR011051"
+ /db_xref="InterPro:IPR013096"
+ /translation="MGLNVPFSMFISPPQAEFPPTFDPQQQAMVITPLFSWDPELWFD
+ HFSILLSPGAVSESTPHKSGVIEHVVVIQGRLDMCTDGVWQTIDAGKGLHFAGDQAHT
+ YRNSSDQTVHFHSLIPYPRD"
+ misc_feature 1328376..1328579
+ /locus_tag="SARI_01373"
+ /note="Cupin domain; Region: Cupin_2; pfam07883"
+ /db_xref="CDD:219618"
+ gene 1328676..1330640
+ /locus_tag="SARI_01374"
+ CDS 1328676..1330640
+ /locus_tag="SARI_01374"
+ /inference="protein motif:BlastProDom:IPR001539"
+ /inference="protein motif:HMMPfam:IPR001539"
+ /inference="protein motif:ScanRegExp:IPR001539"
+ /note="'KEGG: sec:SC1601 0. ydcP; putative collagenase
+ K08303;
+ COG: COG0826 Collagenase and related proteases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570414.1"
+ /db_xref="GI:161503302"
+ /db_xref="InterPro:IPR001539"
+ /translation="MRQQPHYLELLSPARDAAIAREAILHGADAVYIGGPGFGARHNA
+ SNSLRDIADLVPFAHRYGARIFVTLNTILHDDELEPAQRLITDLYDTGVDALIVQDMG
+ ILELDIPPIELHASTQCDIRSVEKAKFLADVGFSQIVLARELNLSQIAAIHQATDATI
+ EFFIHGALCVAYSGQCYISHAQTGRSANRGDCSQACRLPYTLKDDQGRVVSYEKHLLS
+ MKDNDQTANLGALIDAGVRSFKIEGRYKDMSYVKNITAHYRQMLDAIIEQRSDLARAS
+ AGRTEHFFVPSTEKTFHRGSTDYFVNARKGDIGAFDSPKFIGLPVGEVLNVAKDYLDV
+ EATEPLANGDGLNVLLKRDVVGFRANTVEKIGHNRYRVWPNDMPADLYKVRPHHSLNR
+ NLDHNWQQALTKTSSERRVAVDIMLGGWQEQLILTLTSEEGISITHTLDGMFEEANNP
+ EKALNNLKDGLAKLGQTIYYACEVQVTLPAALFVPNSLLNQFRREAIDMLDTARLARY
+ QRGRRKPVAQPAPAYPQTHLSFLANVYNHKAREFYHRYGVQLIDAAYEAHQEKGDVPV
+ MITRHCLRFAFNLCPKQAKGNIKSWKATPMQLVHGDEVLTLKFDCRPCEMHVIGKIKN
+ YILKMPQPGSVVASVSPEALMKTLPKRRGV"
+ misc_feature 1328697..1329719
+ /locus_tag="SARI_01374"
+ /note="Collagenase and related proteases
+ [Posttranslational modification, protein turnover,
+ chaperones]; Region: COG0826"
+ /db_xref="CDD:223896"
+ misc_feature <1328706..>1328972
+ /locus_tag="SARI_01374"
+ /note="TIM barrel proteins share a structurally conserved
+ phosphate binding motif and in general share an eight
+ beta/alpha closed barrel structure. Specific for this
+ family is the conserved phosphate binding site at the
+ edges of strands 7 and 8. The phosphate...; Region:
+ TIM_phosphate_binding; cl17186"
+ /db_xref="CDD:247740"
+ misc_feature 1328907..1329593
+ /locus_tag="SARI_01374"
+ /note="Peptidase family U32; Region: Peptidase_U32;
+ pfam01136"
+ /db_xref="CDD:216321"
+ misc_feature 1329843..1330199
+ /locus_tag="SARI_01374"
+ /note="Collagenase; Region: DUF3656; pfam12392"
+ /db_xref="CDD:221556"
+ gene complement(1330641..1330874)
+ /locus_tag="SARI_01375"
+ CDS complement(1330641..1330874)
+ /locus_tag="SARI_01375"
+ /inference="similar to AA sequence:INSD:AAL20521.1"
+ /note="'COG: NOG18519 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570415.1"
+ /db_xref="GI:161503303"
+ /translation="MMFTKALSVVLLTCALFSGQLLAKQQGHEFVWFATGGHQLRHEA
+ DSDELRAAAEESAEGLREHHNWQKSRKPESYFR"
+ misc_feature complement(1330644..1330871)
+ /locus_tag="SARI_01375"
+ /note="Protein of unknown function (DUF2554); Region:
+ DUF2554; pfam10829"
+ /db_xref="CDD:151278"
+ gene complement(1331492..1332469)
+ /gene="sifB"
+ /locus_tag="SARI_01376"
+ CDS complement(1331492..1332469)
+ /gene="sifB"
+ /locus_tag="SARI_01376"
+ /inference="protein motif:HMMPfam:IPR010637"
+ /inference="similar to AA sequence:INSD:AAF42760.1"
+ /note="translocated by the type III secretion system
+ SPI-2; localizes to Sifs in infected cells and
+ specifically to Salmonella-containing vacuoles"
+ /codon_start=1
+ /transl_table=11
+ /product="secreted effector protein"
+ /protein_id="YP_001570416.1"
+ /db_xref="GI:161503304"
+ /db_xref="InterPro:IPR010637"
+ /translation="MPITIGSSFLKSELFPENSNTQRSFFYLLWEAIKEFFCGTGRAD
+ ADRYIKELCNITSPPGAQRLLDLFCALYKLSSPTCRDNFHFEYYKDAECQYTNLYIED
+ GAETPLRIVIRQDYYYYSIMDKTVTCIYTYPETLKTYPDVSIKTGTYVCEPLCCLFPE
+ RLLLTLPGDITFSISLNEIKETLIGMAENGTLYSWKEQERKIAISSRINTGIARAGVT
+ HIDKATQNIIASKAISAADLKNTIYDANYTQSSIMQMVYSCLFKNDILANLLYEETCY
+ NQLCLNELTEYVALQIHNCLFSENLSSLVEIAEKETHHQLLLNHKNNHL"
+ misc_feature complement(1331534..1332469)
+ /gene="sifB"
+ /locus_tag="SARI_01376"
+ /note="secreted effector protein SifB; Provisional;
+ Region: sifB; PRK09499"
+ /db_xref="CDD:137339"
+ gene 1332923..1333300
+ /locus_tag="SARI_01377"
+ CDS 1332923..1333300
+ /locus_tag="SARI_01377"
+ /inference="similar to AA sequence:INSD:AAV77216.1"
+ /note="'COG: NOG27850 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570417.1"
+ /db_xref="GI:161503305"
+ /translation="MKKSDHDVHEKTASWSILQSEWLKKCGRLLLLLLYRFAIGWAFF
+ QLLTIIVAGILLLGVLLFHPVIFVQTITITEKLNHASVYLWNILKLCLWNYGVIAGFI
+ FMLGCTINKSIRQAQRLSRKFDV"
+ gene 1333911..1334687
+ /locus_tag="SARI_01378"
+ CDS 1333911..1334687
+ /locus_tag="SARI_01378"
+ /inference="protein motif:BlastProDom:IPR000755"
+ /inference="protein motif:HMMPfam:IPR000755"
+ /inference="similar to AA sequence:REFSEQ:NP_455898.1"
+ /note="'KEGG: stt:t1508 3.8e-100 pcgL; D-alanyl-D-alanine
+ dipeptidase K08641;
+ COG: COG2173 D-alanyl-D-alanine dipeptidase;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570418.1"
+ /db_xref="GI:161503306"
+ /db_xref="InterPro:IPR000755"
+ /translation="MVKRVSSFLLFSLLSLQAMSAETQIDSHRPKDVVDITTVAPDVQ
+ VDMRYFTSYNVIGRPIKGYKAPVCLLTPPAANAVKQVADRLPPFGLTLKIYDFYRPQT
+ AVNDFTAMAKAPSQKQMKNEFYPQVDKSSLFEKGYIAAKSSHSRGSTLDLMIVPLDSK
+ LPVYHPGRPLADCAAPAAQRSPDNSLDFGTGFDCFSPLSHPDNAMLTAQQRANRLLLQ
+ TLMRDAGIIQNGGISPLLMSHTRRLGLTFPLRREPQTTLC"
+ misc_feature 1333959..1334585
+ /locus_tag="SARI_01378"
+ /note="D-ala-D-ala dipeptidase; Region: Peptidase_M15;
+ cl00813"
+ /db_xref="CDD:242112"
+ gene 1334807..1336216
+ /locus_tag="SARI_01379"
+ CDS 1334807..1336216
+ /locus_tag="SARI_01379"
+ /inference="protein motif:Gene3D:IPR000524"
+ /inference="protein motif:HMMPfam:IPR000524"
+ /inference="protein motif:HMMPfam:IPR004839"
+ /inference="protein motif:HMMSmart:IPR000524"
+ /inference="similar to AA sequence:REFSEQ:YP_150531.1"
+ /note="'KEGG: eci:UTI89_C1658 4.8e-212 ydcR; hypothetical
+ protein YdcR K00811;
+ COG: COG1167 Transcriptional regulators containing a
+ DNA-binding HTH domain and an aminotransferase domain
+ (MocR family) and their eukaryotic orthologs;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570419.1"
+ /db_xref="GI:161503307"
+ /db_xref="InterPro:IPR000524"
+ /db_xref="InterPro:IPR004839"
+ /translation="MKKYQRLAEHIREQIASGVWLPGDRLPSLREQVASSGMSFMTVG
+ HAYQLLESQGRIIARPQSGYYVAPHPVCRSVASAAHVIRDEAVDINTYIFEMLQASRD
+ ASIVPFASAFPDPRLFPLPQLNRSLAQISKTATAMSVIENLPPGNAELRYAIAHRYAQ
+ QGITVSPDEIVITAGAMEALNLSLQAVTAPGDWVVVETPCFYGALQALERLRLKALSI
+ PTDVKEGIDIMALEQALQEYPVKACWLMTNSQNPLGFTLSAEKKARLVALFTHYNVTL
+ IEDDVYSELYFGREKPLPAKAWDRDDSVLHCSSFSKCLVPGFRIGWVAGGSHAREIQR
+ LQLMSTLSTSSPMQLALVDYLSTRRYDAHLRRLRRQLAERKQQAWQTLLRHLPAEVKI
+ HHNDSGYFLWLALPEHFDAGELSAKALEHNISIAPGKMFSTSGAWTRYFRFNTAWHWG
+ EREEQAVKQLGCLIREMLR"
+ misc_feature 1334807..1336213
+ /locus_tag="SARI_01379"
+ /note="Transcriptional regulators containing a DNA-binding
+ HTH domain and an aminotransferase domain (MocR family)
+ and their eukaryotic orthologs [Transcription / Amino acid
+ transport and metabolism]; Region: ARO8; COG1167"
+ /db_xref="CDD:224089"
+ misc_feature 1334810..1335007
+ /locus_tag="SARI_01379"
+ /note="Winged helix-turn-helix (WHTH) DNA-binding domain
+ of the GntR family of transcriptional regulators; Region:
+ WHTH_GntR; cd07377"
+ /db_xref="CDD:153418"
+ misc_feature order(1334810..1334812,1334816..1334818,1334885..1334887,
+ 1334891..1334896,1334918..1334932,1334936..1334941,
+ 1334948..1334950,1334978..1334983,1334987..1334998)
+ /locus_tag="SARI_01379"
+ /note="DNA-binding site [nucleotide binding]; DNA binding
+ site"
+ /db_xref="CDD:153418"
+ misc_feature 1335122..1336144
+ /locus_tag="SARI_01379"
+ /note="Aspartate aminotransferase family. This family
+ belongs to pyridoxal phosphate (PLP)-dependent aspartate
+ aminotransferase superfamily (fold I). Pyridoxal phosphate
+ combines with an alpha-amino acid to form a compound
+ called a Schiff base or aldimine...; Region: AAT_like;
+ cd00609"
+ /db_xref="CDD:99734"
+ misc_feature order(1335329..1335337,1335407..1335409,1335557..1335559,
+ 1335650..1335652,1335731..1335733,1335737..1335742,
+ 1335761..1335763)
+ /locus_tag="SARI_01379"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:99734"
+ misc_feature order(1335338..1335340,1335437..1335439,1335629..1335631,
+ 1335755..1335763,1335845..1335847,1335854..1335856)
+ /locus_tag="SARI_01379"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99734"
+ misc_feature 1335740..1335742
+ /locus_tag="SARI_01379"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:99734"
+ gene 1336367..1337791
+ /locus_tag="SARI_01380"
+ CDS 1336367..1337791
+ /locus_tag="SARI_01380"
+ /inference="protein motif:HMMPfam:IPR002086"
+ /inference="protein motif:HMMPIR:IPR012303"
+ /inference="protein motif:ScanRegExp:IPR002086"
+ /inference="similar to AA sequence:REFSEQ:YP_216581.1"
+ /note="catalyzes the formation of 4-aminobutanoate from
+ 4-aminobutanal; involved in putrescine degradation"
+ /codon_start=1
+ /transl_table=11
+ /product="gamma-aminobutyraldehyde dehydrogenase"
+ /protein_id="YP_001570420.1"
+ /db_xref="GI:161503308"
+ /db_xref="InterPro:IPR002086"
+ /db_xref="InterPro:IPR012303"
+ /translation="MQYQLLINGALVNGEGERQSVYNPATGEVILEIAEASPKQVDAA
+ VLAADNAFTAWGQTTPKVRAECLLELADSIKQNALQLAKLESQNCGKPLHCVINDEIP
+ AIIDVFRFFAGAARCLNGLAAGEYLEGYTSMIRRDPVGVVASIAPWNYPLMMAAWKLA
+ PALAAGNCVVIKPSEITPLTALKLAALAKDIFPPGVINVLFGRGQTVGDALTGHEKVR
+ MVSLTGSIATGEHILRHTAPAIKRTHMELGGKAPVIVFNDADLDAVAQGIRTFGFYNA
+ GQDCTAACRIYAQRGIYDTLVEKLGQAVSSLKMGAPEDESTELGPLSSQAHLARVTAA
+ VEEAKALSHIRVIAGGRQTGGKGYYFAPTLLADAKQEDAIVQREVFGPVVSITAFDDE
+ EQVLRWANESRYGLASSVWTQDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKQS
+ GYGKDMSLYGLEDYTLVRHIMIKH"
+ misc_feature 1336367..1337788
+ /locus_tag="SARI_01380"
+ /note="gamma-aminobutyraldehyde dehydrogenase;
+ Provisional; Region: PRK13473"
+ /db_xref="CDD:237391"
+ misc_feature 1336427..1337782
+ /locus_tag="SARI_01380"
+ /note="Escherichia coli NAD+-dependent
+ gamma-aminobutyraldehyde dehydrogenase YdcW-like; Region:
+ ALDH_ABALDH-YdcW; cd07092"
+ /db_xref="CDD:143411"
+ misc_feature order(1336541..1336543,1336682..1336684,1336712..1336714,
+ 1336724..1336735,1336739..1336744,1336748..1336750,
+ 1336766..1336771,1337018..1337020,1337054..1337056,
+ 1337063..1337065,1337084..1337086,1337105..1337107,
+ 1337600..1337614,1337621..1337626,1337630..1337632,
+ 1337639..1337641,1337645..1337662,1337687..1337695,
+ 1337708..1337713,1337726..1337728,1337765..1337782)
+ /locus_tag="SARI_01380"
+ /note="tetrameric interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:143411"
+ misc_feature order(1336799..1336804,1336808..1336810,1336880..1336882,
+ 1336886..1336891,1336976..1336978,1336991..1336993,
+ 1337033..1337041,1337048..1337050,1337057..1337059,
+ 1337102..1337104,1337108..1337110,1337204..1337206,
+ 1337345..1337347,1337498..1337500)
+ /locus_tag="SARI_01380"
+ /note="NAD binding site [chemical binding]; other site"
+ /db_xref="CDD:143411"
+ misc_feature order(1336811..1336813,1337102..1337104,1337195..1337197,
+ 1337204..1337206)
+ /locus_tag="SARI_01380"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:143411"
+ misc_feature order(1337201..1337203,1337678..1337680)
+ /locus_tag="SARI_01380"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:143411"
+ gene 1338113..1338349
+ /locus_tag="SARI_01381"
+ CDS 1338113..1338349
+ /locus_tag="SARI_01381"
+ /inference="similar to AA sequence:REFSEQ:YP_216580.1"
+ /note="'COG: NOG12162 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570421.1"
+ /db_xref="GI:161503309"
+ /translation="MCLKKKSILRAFFLWLARMPEMSLYQKMLVFYAVMAVISFLITW
+ FLTHDKKRIRFLSAFLVGATWPISLPVALLFSLF"
+ misc_feature 1338182..1338346
+ /locus_tag="SARI_01381"
+ /note="Protein of unknown function (DUF2566); Region:
+ DUF2566; pfam10753"
+ /db_xref="CDD:119273"
+ gene complement(1338393..1340537)
+ /locus_tag="SARI_01382"
+ CDS complement(1338393..1340537)
+ /locus_tag="SARI_01382"
+ /note="'COG: COG4458 Uncharacterized protein conserved in
+ bacteria, putative virulence factor;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570422.1"
+ /db_xref="GI:161503310"
+ /translation="MTKPLNATQAVIEWVNNTRRYATRLDDEADALLAQLTLVAADES
+ ALNAACASQGCVGLYGYEQSAKAHLLTTLCGNENGKLEIITPDRNYDYFSHINPGHAP
+ ANMAIRFTRDTCSNESNWPLRLRLISEAELVQLFIAWTCSSSDCRQVEKSIITSRLEK
+ WQSLRQPQPVPGVTAEEVATIARFWRTCLPSARQHIDDATWQHFASLLPAVDLTTRAH
+ AWALLWGEQPEITQQWLALAHTLQQTGHAEELAAPLSLLVDHFGLPTENFLTQMALIA
+ SDTQSDVVVHPVKQGSLLNAVSLSLDSLALLTCELVLTVENCALDNVDLLDIPVAPDV
+ HPHPLWRAKLGWMLAHYRQQMQPDVLVICNALASRSQTSTAARHLMEWVNATQPQRES
+ ALPGVVWAITPQDARFATQQNLDEAVQQLMGKPGVHWGTLQALDKHSMQRLVEWLSQA
+ TSAPQRQARLQALREQQRGRVRDLLPIFEDARLPVETVIRRLQAQAARHGDLLSGLLP
+ PVQNFEALLRTRQSREEQVNSLFNDAIDLFADEPTCAPASEGRETGYQAHKMWINHLR
+ QWARSQNNAQRLGMEPPLLNTVANILITASYRLGLPQQLQKTMQREDVSGAQLHAIVG
+ NFIAWLGYADIEEAQRPASRVQKGTAIFAATPRSTMLRLTELNEQPVHAASRYVYDWL
+ VALYTLANENTGYRHPRDVTDVDREQLMALIG"
+ misc_feature complement(1338399..1340537)
+ /locus_tag="SARI_01382"
+ /note="Uncharacterized protein conserved in bacteria,
+ putative virulence factor [Function unknown]; Region:
+ SrfC; COG4458"
+ /db_xref="CDD:226865"
+ gene complement(1340534..1343515)
+ /locus_tag="SARI_01383"
+ CDS complement(1340534..1343515)
+ /locus_tag="SARI_01383"
+ /inference="protein motif:HMMPfam:IPR009216"
+ /note="'COG: COG4457 Uncharacterized protein conserved in
+ bacteria, putative virulence factor;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570423.1"
+ /db_xref="GI:161503311"
+ /db_xref="InterPro:IPR009216"
+ /translation="MLVNLCNYKQSVTLIANSGVQFLDFGLTPQESAHYGRFVRKTAN
+ GPLLRLDFDLTSGRYTLPGRAGGQPEVVKPESTQALHYSLDVLDGIWLPLPFLRFNPP
+ RTFIDGPDNWARIQVRKLSKPDSAGNTHRITLAFDSQLAKNMPSALAPCENDLLNGTR
+ FALAWRDEEVADFLDQTWIDGWLRESFLQYASQVENRSEQAIQQALRSFEYQAHWLNL
+ LTLLGEQLTVPEVKFVTHTLSTPAIPVDLILDVGNTHTCGVLIEDHGDANDGLRQTAE
+ LQVRSLSEPQYLNDPLFTSRVEFSEARFGKQHFSVESGRDDAFIWPSIARVGDEARLL
+ AMQRLGTEGSSGISSPRRYLWDETPALQDWRFSQMNGKTQREPLATAFPLMNLMNDDG
+ QPLFSLPDEERLPVFSPQYSRSTLMTHMLCEILAQALGQINSVATRLRLGFPASPRQL
+ RTLILTLPSAMPKQEREIFRQRMFEALALVWKAMGWHPQDEDFTTPKQREKSVVPVPE
+ IQMEWDEASCGQLVWLYNESISHYAGRTESFFNALARPDRQPEPGVEPGRALRVASID
+ IGGGTTDMAIVHYQLDDGVGANVKITPHLLFREGFKVAGDDLLLDIIQRCVLPSLQTA
+ LQRAGVTDAAALLATLFGDSGRIDTQAILRQQTALQLFMPLGHAVLSAWEQSDINDPF
+ AGLHATFGDLLIRRPTSNVMNYIQQAIDHALPSGSPTFDIFNVPLQIQFSQLQEALLA
+ GQFTLTTPLHAVCEAISHYHCDILLVTGRPTCLPGVQALIQHLQPVPVNRIVWMDKYQ
+ VHEWYPFNQQGRIGNPKSTAAVGAMLCSLALDLRLPRFNFKAADIGAYSTIRYLGVLD
+ NTVNTLRDENIWYHEIDLDNPDATLDARLHFPLRGNVTLGFRQLANSRWPATPLYSLS
+ INSAELAKTIAGDGVLNVRLKLHGKSKDSPPESFILSDAWLQDGTPIAADALTLKLNT
+ LADRRHSGSHYWIDSGSVYLK"
+ misc_feature complement(1340537..1343515)
+ /locus_tag="SARI_01383"
+ /note="Uncharacterized protein conserved in bacteria,
+ putative virulence factor [Function unknown]; Region:
+ SrfB; COG4457"
+ /db_xref="CDD:226864"
+ gene complement(1343520..1344830)
+ /locus_tag="SARI_01384"
+ CDS complement(1343520..1344830)
+ /locus_tag="SARI_01384"
+ /inference="similar to AA sequence:REFSEQ:YP_216577.1"
+ /note="'COG: NOG35976 non supervised orthologous group;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570424.1"
+ /db_xref="GI:161503312"
+ /translation="MAKTLLRSGNLDDYQAVGGGGQAVFESAWQIRETLRLRKQQAMA
+ DCLAIPQLNDNGDRVDWYSPIEGQAIAWKAADEETHFRALRYLASTFESAAALSRKSL
+ QSGKTALQLFGSLLEKATQFPGENHVFLVNGKPVITFWGFVNLNENTRDDVLDCLRTT
+ EAIADIPLVEPEPEPEEKPFVEAVFNQADKSLLASVTEPPNALDPIVSPVIVNTPDST
+ PRATDQAKRSRRLPLWSLPVAAVVIAAVATPFFWQSSFVEGSSPARVVPAAITHNPLP
+ ELTAHLPLHRADVTPAPKVVPPPEAPVIIAAIPKDALVMDSTQMKLGTTRFLNGNWRV
+ IVDVKDPITGKPPSLRYQIQNNKGIARVVHGDNVVCRAEIFSGLHQTGELMIKSRGNA
+ RCTDGSRYPMPEITCKAGVNDVATCTARYDEHAAIPLTFKKIGA"
+ gene 1345053..1345286
+ /locus_tag="SARI_01385"
+ CDS 1345053..1345286
+ /locus_tag="SARI_01385"
+ /inference="similar to AA sequence:INSD:AAV77225.1"
+ /note="'COG: NOG13890 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570425.1"
+ /db_xref="GI:161503313"
+ /translation="MSHLEEVSARVDAAIAESVIAHMNELLIALSDDAELRREDRYAQ
+ QQRLRTAIAHHGRQYKEDRDARREQLTKGGTIL"
+ misc_feature 1345053..1345283
+ /locus_tag="SARI_01385"
+ /note="Protein of unknown function (DUF2526); Region:
+ DUF2526; pfam10735"
+ /db_xref="CDD:119255"
+ gene complement(1345291..1345746)
+ /locus_tag="SARI_01386"
+ CDS complement(1345291..1345746)
+ /locus_tag="SARI_01386"
+ /inference="protein motif:HMMPfam:IPR006750"
+ /inference="similar to AA sequence:INSD:AAO69136.1"
+ /note="'COG: COG3238 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570426.1"
+ /db_xref="GI:161503314"
+ /db_xref="InterPro:IPR006750"
+ /translation="MQMNQSLTLIFLITAGVGLVVQNSIMVRITQTSSSILIAMLLNS
+ LVGIVLFVTILWFKQGAAGFGELFVSVRWWTLIPGLLGSFFVFASISGYQNVGAATTI
+ AVLVASQLIGGLALDLARSHGVTLRAMVGPAFGALLLVIGAWLIAKRQF"
+ misc_feature complement(1345294..1345740)
+ /locus_tag="SARI_01386"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG3238"
+ /db_xref="CDD:225778"
+ gene complement(1345737..1346255)
+ /locus_tag="SARI_01387"
+ CDS complement(1345737..1346255)
+ /locus_tag="SARI_01387"
+ /inference="protein motif:HMMPfam:IPR000182"
+ /inference="protein motif:HMMPfam:IPR013653"
+ /inference="similar to AA sequence:INSD:AAV77227.1"
+ /note="'KEGG: stm:STM1590 1.1e-88 yncA; putative
+ acyltransferase K03823;
+ COG: COG1247 Sortase and related acyltransferases;
+ Psort location: cytoskeletal, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570427.1"
+ /db_xref="GI:161503315"
+ /db_xref="InterPro:IPR000182"
+ /db_xref="InterPro:IPR013653"
+ /translation="MTIRFADKADCAAITEIYNHAVLNTAAIWNDRTVDTDNRLAWYE
+ TRQLLGYPVLVSEENGVVTGYASFGDWRSFDGFRYTVEHSVYVHPAHQGKGLGRKLLS
+ RLIDEARRCGKHVMVAGIESQNAASIRLHHALGFTVTAQMPQVGVKFGRWLDLTFMQL
+ QLDERAAPDVCR"
+ misc_feature complement(1345755..1346255)
+ /locus_tag="SARI_01387"
+ /note="Sortase and related acyltransferases [Cell envelope
+ biogenesis, outer membrane]; Region: COG1247"
+ /db_xref="CDD:224168"
+ misc_feature complement(1345845..1346087)
+ /locus_tag="SARI_01387"
+ /note="Acetyltransferase (GNAT) family; Region:
+ Acetyltransf_1; pfam00583"
+ /db_xref="CDD:216007"
+ gene 1346448..1347515
+ /locus_tag="SARI_01388"
+ CDS 1346448..1347515
+ /locus_tag="SARI_01388"
+ /inference="protein motif:HMMPanther:IPR002085"
+ /inference="protein motif:HMMPfam:IPR013149"
+ /inference="protein motif:superfamily:IPR011032"
+ /inference="similar to AA sequence:REFSEQ:NP_460548.1"
+ /note="'KEGG: stm:STM1589 2.6e-188 yncB; putative
+ NADP-dependent oxidoreductase;
+ COG: COG2130 Putative NADP-dependent oxidoreductases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative NADP-dependent oxidoreductase"
+ /protein_id="YP_001570428.1"
+ /db_xref="GI:161503316"
+ /db_xref="InterPro:IPR002085"
+ /db_xref="InterPro:IPR011032"
+ /db_xref="InterPro:IPR013149"
+ /translation="MDYARHEENIMKQHTNRNRRWVLASRPHGAPQMDNFRLEEDAVA
+ TPGEGQVLLRTVFLSLDPYMRGRMSDEPSYAPPIEPGCVMVGGTVSRVVASNHPDYQP
+ DEWVLSYNGWQDYDISDGKGLVKLGDNPQHPSWSLGISGMPGFTAYMGLLDIGQPKEG
+ ETLVVAAATGPVGATVGQIGKLKGCRVVGIAGGAEKCRHATEVLGFDLCLDHHADDFP
+ QQLAQACSQGIDIYYENVGGKVFDAVLPLLNTSARIPLCGLVSGYNATALPDGPDRLP
+ LLMATLLKKRIRLQGFIIDQDYGQRIHEFQQEMGRWIKEGKIHYREQITDGLENAPEA
+ FIGLLAGKNFGKAVIRLAEDA"
+ misc_feature 1346475..1347506
+ /locus_tag="SARI_01388"
+ /note="Putative NADP-dependent oxidoreductases [General
+ function prediction only]; Region: COG2130"
+ /db_xref="CDD:225041"
+ misc_feature 1346499..1347494
+ /locus_tag="SARI_01388"
+ /note="Prostaglandin dehydrogenases; Region: PGDH;
+ cd05288"
+ /db_xref="CDD:176190"
+ misc_feature order(1346631..1346633,1346871..1346873,1346883..1346885,
+ 1346955..1346963,1347018..1347023,1347033..1347035,
+ 1347081..1347083,1347150..1347155,1347216..1347230,
+ 1347234..1347236,1347321..1347329,1347459..1347464,
+ 1347468..1347470,1347474..1347476)
+ /locus_tag="SARI_01388"
+ /note="NAD(P) binding site [chemical binding]; other site"
+ /db_xref="CDD:176190"
+ misc_feature order(1346634..1346636,1347234..1347236,1347333..1347335)
+ /locus_tag="SARI_01388"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:176190"
+ misc_feature order(1346643..1346645,1346655..1346657,1347198..1347200,
+ 1347213..1347224,1347231..1347233,1347291..1347296,
+ 1347303..1347326,1347336..1347338)
+ /locus_tag="SARI_01388"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:176190"
+ gene 1347508..1347633
+ /locus_tag="SARI_01389"
+ CDS 1347508..1347633
+ /locus_tag="SARI_01389"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570429.1"
+ /db_xref="GI:161503317"
+ /translation="MRKEKMAAFCRHKNVQILKFRLYLYPSLGGYHLWLMISRVT"
+ gene 1347845..1348510
+ /locus_tag="SARI_01390"
+ CDS 1347845..1348510
+ /locus_tag="SARI_01390"
+ /inference="protein motif:Gene3D:IPR000524"
+ /inference="protein motif:HMMPfam:IPR000524"
+ /inference="protein motif:HMMPfam:IPR011711"
+ /inference="protein motif:HMMSmart:IPR000524"
+ /inference="similar to AA sequence:INSD:AAL20506.1"
+ /note="'KEGG: msm:MSMEG_3400 8.3e-08 glutamyl-tRNA(Gln)
+ amidotransferase subunit A K01957;
+ COG: COG1802 Transcriptional regulators;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative DNA-binding transcriptional regulator"
+ /protein_id="YP_001570430.1"
+ /db_xref="GI:161503318"
+ /db_xref="InterPro:IPR000524"
+ /db_xref="InterPro:IPR011711"
+ /translation="MPGTEKTQHISLTTQVENKLKHQLSIGALKPGARLITKNIAQEL
+ GISITPVREALLRLVSSSALSVAPAQAFMVPEISLGRLLEINTIRTALEEMAVAAAAG
+ KITPDREQTLNALLDEFQQALESGVMEDILLTNRAFRFEIYHYADMPTLYAMIEQLWV
+ RLGPSLHFLYDNFKLDGYENGVNLYRKLLNALVSGDKEASRYCLQNVLQQNVATIKNQ
+ YVM"
+ misc_feature 1347845..1348507
+ /locus_tag="SARI_01390"
+ /note="colanic acid/biofilm transcriptional regulator;
+ Provisional; Region: PRK11414"
+ /db_xref="CDD:183126"
+ misc_feature 1347875..>1348003
+ /locus_tag="SARI_01390"
+ /note="Winged helix-turn-helix (WHTH) DNA-binding domain
+ of the GntR family of transcriptional regulators; Region:
+ WHTH_GntR; cd07377"
+ /db_xref="CDD:153418"
+ misc_feature order(1347875..1347877,1347881..1347883,1347950..1347952,
+ 1347956..1347961,1347980..1347994,1347998..1348003)
+ /locus_tag="SARI_01390"
+ /note="DNA-binding site [nucleotide binding]; DNA binding
+ site"
+ /db_xref="CDD:153418"
+ misc_feature 1348094..1348456
+ /locus_tag="SARI_01390"
+ /note="FCD domain; Region: FCD; pfam07729"
+ /db_xref="CDD:219539"
+ gene complement(1348558..1350678)
+ /locus_tag="SARI_01391"
+ CDS complement(1348558..1350678)
+ /locus_tag="SARI_01391"
+ /inference="protein motif:HMMPfam:IPR000531"
+ /inference="protein motif:HMMPfam:IPR012910"
+ /note="'KEGG: shn:Shewana3_3063 0.0041
+ phosphatidylglycerophosphatase K01094;
+ COG: COG1629 Outer membrane receptor proteins, mostly Fe
+ transport;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570431.1"
+ /db_xref="GI:161503319"
+ /db_xref="InterPro:IPR000531"
+ /db_xref="InterPro:IPR012910"
+ /translation="MKIISVRQRLYPAFLFPLAFSPVLQAADTPNEQTMIVTATPQTV
+ SELDTPAAVSVVEGEDMRLATPRVNLSESLTSVPGLQVQNRQNYAQDLQISIRGFGSR
+ SAFGVRGIRLYVDGIPATMPDGQGQISNIDINSIQNVEVLRGPFSALYGNASGGVINV
+ TTETGKQPPTLEASSYYSSYGSWRYGLKATGAMGDGTQPGDVDYTVSTTRFTTHGYRA
+ HSGARKNLANAKLGVRLDDASKLSLIFNSVDIKADDPGGLTESEWKADPQQAPRAEQY
+ NTRKTVKQTQAGLRYERQLSAQDDISVMAYAGERETTQYQSIPMAAQLKPAQAGGVIT
+ LQRHYQGIDSRWTHRGELGVPVTFTTGLNYENMSENRKGYNNFRFNNGLPEFGHKGDL
+ RRDERNLMWNVDPYLQTQWQLTQKFSLDAGVRYSSVWFDSNDHYVASGNGDDSGDASY
+ HQWLPAGSLKYALTDAWNLYLAAGRGFETPTINEISYRADGQSGFNFDLKPSTNDTVE
+ VGSKTRIGNGLLTAALFQTDTDDEIVVASSMGGRTTYKNAGKTRRQGAELALDQRLAG
+ GWRMKASWTWLDATYRSNVCQGQNCNGNRMPGIARNMGFASLGFVPDEGWYAGTDVRY
+ MGDIMADDKNTAKAPSYTVVGLNTGYKLNYSQLTIDIFGRVDNLFDKEYIGSVIVNES
+ NGRYYEPAPGRNYGVGINLAWRFE"
+ misc_feature complement(1348570..1350606)
+ /locus_tag="SARI_01391"
+ /note="Outer membrane receptor proteins, mostly Fe
+ transport [Inorganic ion transport and metabolism];
+ Region: CirA; COG1629"
+ /db_xref="CDD:224544"
+ misc_feature complement(1348570..1350522)
+ /locus_tag="SARI_01391"
+ /note="TonB dependent/Ligand-Gated channels are created by
+ a monomeric 22 strand (22,24) anti-parallel beta-barrel.
+ Ligands apparently bind to the large extracellular loops.
+ The N-terminal 150-200 residues form a plug from the
+ periplasmic end of barrel; Region: ligand_gated_channel;
+ cd01347"
+ /db_xref="CDD:238657"
+ misc_feature complement(order(1350193..1350219,1350250..1350264,
+ 1350265..1350276,1350322..1350345,1350382..1350399,
+ 1350436..1350465,1350496..1350522))
+ /locus_tag="SARI_01391"
+ /note="N-terminal plug; other site"
+ /db_xref="CDD:238657"
+ misc_feature complement(order(1349662..1349664,1349737..1349739))
+ /locus_tag="SARI_01391"
+ /note="ligand-binding site [chemical binding]; other site"
+ /db_xref="CDD:238657"
+ gene 1350943..1352004
+ /locus_tag="SARI_01392"
+ CDS 1350943..1352004
+ /locus_tag="SARI_01392"
+ /inference="protein motif:Gene3D:IPR003143"
+ /inference="protein motif:superfamily:IPR011044"
+ /inference="similar to AA sequence:REFSEQ:YP_216571.1"
+ /note="'COG: COG3391 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570432.2"
+ /db_xref="GI:448236226"
+ /db_xref="InterPro:IPR003143"
+ /db_xref="InterPro:IPR011044"
+ /translation="MHLRHLFSPRLRGSLLLGSLLVASSFNTLAAEEMLRKAVGKGAY
+ EMAYSQQENALWLATSLSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINTVTQT
+ LWFGNTVNSAVTAIDAKTGDVKGRLILDARKRTEEVRPLQPRELVADASTNTVYISGI
+ GKESVIWVVDGETIKLKTTIKNTGKMSTGLALDSKAQRLYTTNADGEFITIDTASNKI
+ LSRKTLLDDGKEHFFINLSLDTAGHRAFITDSKAAEVLVVDTHNGNILAKITAPASLA
+ VLFNPTRNEVYVTHRQEGKVSVIDAKSYKVVKTFDTPTYPNSLTLSADGKTLYVSVKQ
+ KSTREQEATQPDDVIRIAL"
+ misc_feature 1351042..1352001
+ /locus_tag="SARI_01392"
+ /note="Uncharacterized conserved protein [Function
+ unknown]; Region: COG3391"
+ /db_xref="CDD:225926"
+ gene complement(1352645..1353223)
+ /locus_tag="SARI_01393"
+ CDS complement(1352645..1353223)
+ /locus_tag="SARI_01393"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR001647"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:REFSEQ:NP_455921.1"
+ /note="'COG: COG1309 Transcriptional regulator;
+ Psort location: vesicles of secretory system, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570433.1"
+ /db_xref="GI:161503321"
+ /db_xref="InterPro:IPR001647"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /translation="MSYLNRDERREVILQAAMRVALEDGFAAMTVRRIASEADVAAGQ
+ VHHHFSSAGELKALAFVHLIRTLLDAGQVPPPATWRERLHAMLGSEDGGFEPYIKLWR
+ EAQILADRDPHIRSAYLLTMQMWHKETVSIIEQGKQAGEFTSTSNAPDIAWRLIALVC
+ GLDGMYVLGIPEMADPAFEYHLDRMITLELFA"
+ misc_feature complement(1352648..1353223)
+ /locus_tag="SARI_01393"
+ /note="TetR family transcriptional regulator; Provisional;
+ Region: PRK14996"
+ /db_xref="CDD:184958"
+ misc_feature complement(1353059..1353187)
+ /locus_tag="SARI_01393"
+ /note="Bacterial regulatory proteins, tetR family; Region:
+ TetR_N; pfam00440"
+ /db_xref="CDD:201228"
+ gene 1353341..1354828
+ /locus_tag="SARI_01394"
+ CDS 1353341..1354828
+ /locus_tag="SARI_01394"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="similar to AA sequence:INSD:AAL20492.1"
+ /note="'KEGG: shn:Shewana3_1692 0.00039 Xaa-His
+ dipeptidase K01270;
+ COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570434.1"
+ /db_xref="GI:161503322"
+ /db_xref="InterPro:IPR011701"
+ /translation="MFRQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELL
+ WIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTIFGLASLAAAFSHTASWLIATRV
+ LLAIGAAMIVPATLAGIRATFSDEKQRNMALGVWAAVGSGGAAFGPLIGGILLEHFYW
+ GSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHAVMLIIAILLLVYSAKTALKG
+ HLSLWVISVTLLTGALLLGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLV
+ GFELLMAQELQFVHGLSPYEAGVFMLPVMVASGFSGPIAGALVSRLGLRLVATGGMAL
+ SALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPAEKAAAAGAIE
+ TMAYELGAGLGIAIFGLLLSRSFSASIRLPAGLEAQEITRASSSMGEAVQLANSLPPT
+ LGQAILDAARHAFIWSHSVALSSAGSMLLLLAVGMWFSLTKAQRQ"
+ misc_feature 1353341..1354825
+ /locus_tag="SARI_01394"
+ /note="methyl viologen resistance protein SmvA;
+ Provisional; Region: PRK14995"
+ /db_xref="CDD:184957"
+ misc_feature 1353362..>1353892
+ /locus_tag="SARI_01394"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature order(1353404..1353406,1353413..1353421,1353425..1353430,
+ 1353479..1353481,1353488..1353493,1353500..1353502,
+ 1353512..1353517,1353521..1353526,1353662..1353667,
+ 1353674..1353679,1353686..1353691,1353698..1353700,
+ 1353737..1353742,1353749..1353754,1353770..1353772)
+ /locus_tag="SARI_01394"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene complement(1354830..1355270)
+ /locus_tag="SARI_01395"
+ CDS complement(1354830..1355270)
+ /locus_tag="SARI_01395"
+ /inference="protein motif:HMMPfam:IPR006913"
+ /inference="similar to AA sequence:REFSEQ:YP_216560.1"
+ /note="'COG: COG3791 Uncharacterized conserved protein;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570435.1"
+ /db_xref="GI:161503323"
+ /db_xref="InterPro:IPR006913"
+ /translation="MQTFTGRCLCGRSHFTVDVEMLDVYACHCTLCQKWSGGIAMYLE
+ ACGQPQLAPLSPEPPHFSSSSRGERYFCSGCGCPLWFRLTDTDRYFIPWTLLELNDVD
+ RRRLILAAEIYTETQPAFWRLTGQYARLSGKEVEEMDSPCQTTH"
+ misc_feature complement(1354863..1355270)
+ /locus_tag="SARI_01395"
+ /note="Uncharacterized conserved protein [Function
+ unknown]; Region: COG3791"
+ /db_xref="CDD:226314"
+ gene complement(1355356..1356474)
+ /locus_tag="SARI_01396"
+ CDS complement(1355356..1356474)
+ /locus_tag="SARI_01396"
+ /inference="protein motif:FPrintScan:IPR001702"
+ /inference="protein motif:FPrintScan:IPR001897"
+ /inference="protein motif:HMMPfam:IPR001702"
+ /inference="protein motif:ScanRegExp:IPR013793"
+ /inference="similar to AA sequence:INSD:AAL20490.1"
+ /note="'COG: COG3203 Outer membrane protein (porin);
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570436.1"
+ /db_xref="GI:161503324"
+ /db_xref="InterPro:IPR001702"
+ /db_xref="InterPro:IPR001897"
+ /db_xref="InterPro:IPR013793"
+ /translation="MRKLAKKIIRIIKMKLKLVAVAVTSLLAAGVVNAAEVYNKDGNK
+ LDLYGKVHAQHYFSDDNGSDGDKTYARLGFKGETQINDQLTGFGQWEYEFKGNRTESQ
+ GADKDKTRLAFAGLKFADYGSFDYGRNYGVAYDIGAWTDVLPEFGGDTWTQTDVFMTG
+ RTTGVATYRNTDFFGLVEGLNFAAQYQGKNERSNVQEANGDGFGLSTTYEYEGFGVGA
+ TYAKSDRTDAQNNHNSIFKADGKNAEVWAAGLKYDANNIYLATTYSETRNMTTYGSNV
+ AGIAEKAQNFEIVAQYQFDFGLRPSVAYLKSKGKDIAVFGDQDLVEYVDLGATYYFNK
+ NMSTFVDYKINLLDDNNFTRIAGVSTDNIVAVGLNYQF"
+ misc_feature complement(1355359..1356378)
+ /locus_tag="SARI_01396"
+ /note="Outer membrane protein (porin) [Cell envelope
+ biogenesis, outer membrane]; Region: OmpC; COG3203"
+ /db_xref="CDD:225744"
+ misc_feature complement(1355359..1356348)
+ /locus_tag="SARI_01396"
+ /note="Porins form aqueous channels for the diffusion of
+ small hydrophillic molecules across the outer membrane.
+ Individual 16-strand anti-parallel beta-barrels form a
+ central pore, and trimerizes thru mainly hydrophobic
+ interactions at the interface. Trimers...; Region:
+ gram_neg_porins; cd00342"
+ /db_xref="CDD:238208"
+ misc_feature complement(order(1355359..1355361,1355365..1355367,
+ 1355371..1355373,1355467..1355469,1355476..1355481,
+ 1355983..1355988,1355992..1355994,1356091..1356099,
+ 1356127..1356141,1356145..1356150,1356184..1356195,
+ 1356199..1356201,1356205..1356213,1356217..1356219,
+ 1356235..1356249,1356310..1356318,1356322..1356324,
+ 1356340..1356342,1356346..1356348))
+ /locus_tag="SARI_01396"
+ /note="trimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238208"
+ misc_feature complement(order(1355992..1355994,1356052..1356054,
+ 1356145..1356147,1356262..1356264,1356325..1356327))
+ /locus_tag="SARI_01396"
+ /note="eyelet of channel; other site"
+ /db_xref="CDD:238208"
+ gene 1356518..1356700
+ /locus_tag="SARI_01397"
+ CDS 1356518..1356700
+ /locus_tag="SARI_01397"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570437.1"
+ /db_xref="GI:161503325"
+ /translation="MTEWYKFNNKFHKITNYFNLCDQDRLNTFKGINLNRDFLMKYIF
+ VGDYLSVYGFVFGSTD"
+ gene complement(1356963..1357844)
+ /locus_tag="SARI_01398"
+ CDS complement(1356963..1357844)
+ /locus_tag="SARI_01398"
+ /inference="protein motif:HMMPfam:IPR000620"
+ /inference="similar to AA sequence:INSD:AAL20489.1"
+ /note="'COG: COG0697 Permeases of the drug/metabolite
+ transporter (DMT) superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570438.1"
+ /db_xref="GI:161503326"
+ /db_xref="InterPro:IPR000620"
+ /translation="MTSQKATLIGLVAIVLWSTMVGLIRGVSEGLGPVGGAAMIYSLS
+ GLLLIFTVGLPDIRRFPGRYLIAGSVLFVSYEICLALSLGYAATRHQAIEVGMVNYLW
+ PSLTILFAILFNGQKTNWLIVPGLLIALTGVCWVLGGESGLNPGDIISNVATSPLSYL
+ LAFLGAFIWATYCTVTNKYARGFNGITVFVLLTAAALWLHYFLTPQPAMIFSLPVIAK
+ LFTAALTLGFAYAAWNVGILHGNVTIMAVGSYFTPVMSSALAALLLSAPLSFSFWQGA
+ VMVCVGSLLCWLATRRG"
+ misc_feature complement(1356969..1357841)
+ /locus_tag="SARI_01398"
+ /note="aromatic amino acid exporter; Provisional; Region:
+ PRK11689"
+ /db_xref="CDD:183277"
+ gene 1358122..1361169
+ /locus_tag="SARI_01399"
+ /note="Pseudogene based on alignment with
+ gi|16764914|ref|NP_460529.1|"
+ gene 1361183..1362067
+ /locus_tag="SARI_01400"
+ CDS 1361183..1362067
+ /locus_tag="SARI_01400"
+ /inference="protein motif:HMMPfam:IPR001450"
+ /inference="protein motif:HMMTigr:IPR006470"
+ /inference="protein motif:ScanRegExp:IPR001450"
+ /inference="similar to AA sequence:REFSEQ:NP_460528.1"
+ /note="'KEGG: stm:STM1569 4.6e-166 fdnH; formate
+ dehydrogenase, iron-sulfur subunit (formate dehydrogenase
+ beta subunit) K08349;
+ COG: COG0437 Fe-S-cluster-containing hydrogenase
+ components 1;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570439.1"
+ /db_xref="GI:161503327"
+ /db_xref="InterPro:IPR001450"
+ /db_xref="InterPro:IPR006470"
+ /translation="MSMETQDIIKRSATNAITPPPQARDYKAEVAKLIDVSSCVGCKA
+ CQVACSEWNDIRDNVGHCVGVYDNPADLSAKSWTVMRFTETEQNGKLEWLIRKDGCMH
+ CEDPGCLKACPSAGAIIQYANGIVDFQSEHCIGCGYCIAGCPFNIPRLNKEDNRVYKC
+ TLCVDRVSVGQEPACVKTCPTGAIHFGTKKEMLELGEQRVEKLKARGFEHAGIYNPQG
+ VGGTHVMYVLHHANQPELYHGLPKDPQIDTSINLWKGALKPLAAAGFIATFAGLIFHY
+ IGIGPNKETDDDEEEHHE"
+ misc_feature 1361201..1362031
+ /locus_tag="SARI_01400"
+ /note="formate dehydrogenase, beta subunit, Fe-S
+ containing; Region: FDH-beta; TIGR01582"
+ /db_xref="CDD:233481"
+ misc_feature 1361918..1362031
+ /locus_tag="SARI_01400"
+ /note="Formate dehydrogenase N, transmembrane; Region:
+ Form-deh_trans; pfam09163"
+ /db_xref="CDD:192219"
+ gene 1362060..1362716
+ /locus_tag="SARI_01401"
+ CDS 1362060..1362716
+ /locus_tag="SARI_01401"
+ /inference="protein motif:HMMTigr:IPR006471"
+ /inference="similar to AA sequence:REFSEQ:NP_460527.1"
+ /note="'nitrate-inducible, cytochrome b556(fdn) component
+ of formate dehydrogenase'"
+ /codon_start=1
+ /transl_table=11
+ /product="formate dehydrogenase-N subunit gamma"
+ /protein_id="YP_001570440.1"
+ /db_xref="GI:161503328"
+ /db_xref="InterPro:IPR006471"
+ /translation="MSKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFPTLQWLT
+ QTFGTPQMGRILHPFFGIAIFIALMFMFVRFVHHNIPDKKDIPWLKNIVEVLKGNEHK
+ VADVGKYNAGQKMMFWSIMSMIFVLLVTGVIIWRPYFAQYFPMQVVRYSLLIHAAAGI
+ ILMHAILIHMYMAFWVKGSIKGMIEGKVSRRWAKKHHPRWYREIEKAEAKKESEEGIQ
+ "
+ misc_feature 1362060..1362665
+ /locus_tag="SARI_01401"
+ /note="formate dehydrogenase-N subunit gamma; Provisional;
+ Region: PRK10179"
+ /db_xref="CDD:182289"
+ misc_feature 1362078..1362665
+ /locus_tag="SARI_01401"
+ /note="formate dehydrogenase, gamma subunit; Region:
+ formate-DH-gamm; TIGR01583"
+ /db_xref="CDD:130645"
+ gene complement(1362815..1363825)
+ /locus_tag="SARI_01402"
+ CDS complement(1362815..1363825)
+ /locus_tag="SARI_01402"
+ /inference="protein motif:HMMPanther:IPR002085"
+ /inference="protein motif:HMMPfam:IPR013149"
+ /inference="protein motif:HMMPfam:IPR013154"
+ /inference="protein motif:ScanRegExp:IPR002328"
+ /inference="protein motif:superfamily:IPR011032"
+ /inference="similar to AA sequence:INSD:AAX65474.1"
+ /note="similar to zinc-dependent eukaryotic ADH enzymes
+ and distinct from fermentative ADHs"
+ /codon_start=1
+ /transl_table=11
+ /product="alcohol dehydrogenase"
+ /protein_id="YP_001570441.1"
+ /db_xref="GI:161503329"
+ /db_xref="InterPro:IPR002085"
+ /db_xref="InterPro:IPR002328"
+ /db_xref="InterPro:IPR011032"
+ /db_xref="InterPro:IPR013149"
+ /db_xref="InterPro:IPR013154"
+ /translation="MKAAVVTQDHQVDVTEKTLRPLRHGEALLKMECCGVCHTDLHVK
+ NGDFGDKTGVILGHEGIGVVAEVGPGVTSLKPGDRASVAWFYEGCGHCEYCNTGNETL
+ CRNVKNAGYTVDGGMAEECIVVADYAVKVPEGLDSAAASSITCAGVTTYKAVKISHIK
+ PGQWIAIYGLGGLGNLALQYAKNVFNAKVIAIDVNDGQLKLAEEMGADLTINSRTEDA
+ AKIVQEKTGGAHAAVVTAVAKAAFNSAVDAVRAGGRVVAVGLPPEAMNLDIPRLVLDG
+ IQVVGSLVGTRQDLTEAFQFAAEGKVVPKVALRPLEDINVIFKEMEQGQIRGRMVIDF
+ RR"
+ misc_feature complement(1362818..1363825)
+ /locus_tag="SARI_01402"
+ /note="ethanol-active dehydrogenase/acetaldehyde-active
+ reductase; Provisional; Region: PRK09422"
+ /db_xref="CDD:181842"
+ misc_feature complement(1362824..1363825)
+ /locus_tag="SARI_01402"
+ /note="Cinnamyl alcohol dehydrogenases (CAD); Region:
+ CAD3; cd08297"
+ /db_xref="CDD:176257"
+ misc_feature complement(order(1362839..1362841,1362974..1362982,
+ 1363046..1363054,1363103..1363105,1363112..1363123,
+ 1363232..1363234,1363247..1363252,1363307..1363309,
+ 1363310..1363315,1363319..1363321,1363379..1363381,
+ 1363391..1363393,1363700..1363702,1363709..1363717))
+ /locus_tag="SARI_01402"
+ /note="NAD binding site [chemical binding]; other site"
+ /db_xref="CDD:176257"
+ misc_feature complement(order(1362974..1362976,1363046..1363048,
+ 1363391..1363393,1363574..1363576,1363652..1363654,
+ 1363682..1363684,1363709..1363711,1363715..1363717))
+ /locus_tag="SARI_01402"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:176257"
+ misc_feature complement(order(1363391..1363393,1363652..1363654,
+ 1363715..1363717))
+ /locus_tag="SARI_01402"
+ /note="catalytic Zn binding site [ion binding]; other
+ site"
+ /db_xref="CDD:176257"
+ misc_feature complement(order(1362929..1362931,1362938..1362940,
+ 1362950..1362952,1362962..1362967,1362977..1363003,
+ 1363016..1363021,1363046..1363051,1363055..1363057,
+ 1363070..1363072,1363076..1363078,1363100..1363102,
+ 1363214..1363219,1363226..1363228,1363262..1363264,
+ 1363271..1363279,1363340..1363348,1363514..1363522,
+ 1363544..1363549,1363553..1363555,1363682..1363684))
+ /locus_tag="SARI_01402"
+ /note="tetramer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:176257"
+ misc_feature complement(order(1363517..1363519,1363541..1363543,
+ 1363550..1363552,1363559..1363561))
+ /locus_tag="SARI_01402"
+ /note="structural Zn binding site [ion binding]; other
+ site"
+ /db_xref="CDD:176257"
+ gene complement(1364097..1365794)
+ /locus_tag="SARI_01403"
+ CDS complement(1364097..1365794)
+ /locus_tag="SARI_01403"
+ /inference="protein motif:HMMPfam:IPR012301"
+ /inference="protein motif:HMMPfam:IPR012302"
+ /inference="protein motif:HMMPIR:IPR001891"
+ /inference="protein motif:ScanRegExp:IPR001891"
+ /note="malic enzyme; oxaloacetate-decarboxylating;
+ NAD-dependent; catalyzes the formation of pyruvate form
+ malate"
+ /codon_start=1
+ /transl_table=11
+ /product="malate dehydrogenase"
+ /protein_id="YP_001570442.1"
+ /db_xref="GI:161503330"
+ /db_xref="InterPro:IPR001891"
+ /db_xref="InterPro:IPR012301"
+ /db_xref="InterPro:IPR012302"
+ /translation="METTTKKARSLYIPYAGPVLLEFPLLNKGSAFSVEERRNFNLSG
+ LLPEVVESIEEQAERAWLQYQGFKTEIDKHIYLRNIQDTNETLFYRLVQNHLEEMMPV
+ IYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILG
+ LGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRHPRI
+ TDDEYYAFVDEFIQAVKQRWPDILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAA
+ VTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQIIAQTQREGLSEDAARQKVFM
+ VDRFGLLTDRMPNLLSFQTKLVQKCDNLQHWDTENDVLSLLDVVRNVKPDILIGVSGQ
+ TGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVI
+ WKDKVYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLV
+ LPALKDIQVVSRAIAFAVGKMAQQQGVAVKTSAEALQQAIDDNFWKPEYRDYRRTSI"
+ misc_feature complement(1364106..1365794)
+ /locus_tag="SARI_01403"
+ /note="malate dehydrogenase; Provisional; Region:
+ PRK13529"
+ /db_xref="CDD:237414"
+ misc_feature complement(1365012..1365554)
+ /locus_tag="SARI_01403"
+ /note="Malic enzyme, N-terminal domain; Region: malic;
+ pfam00390"
+ /db_xref="CDD:215894"
+ misc_feature complement(1364130..1364984)
+ /locus_tag="SARI_01403"
+ /note="NAD(P) binding domain of malic enzyme (ME),
+ subgroup 1; Region: NAD_bind_1_malic_enz; cd05312"
+ /db_xref="CDD:133454"
+ misc_feature complement(order(1364406..1364408,1364412..1364414,
+ 1364466..1364468,1364541..1364549,1364622..1364627,
+ 1364784..1364789,1364877..1364888))
+ /locus_tag="SARI_01403"
+ /note="NAD(P) binding site [chemical binding]; other site"
+ /db_xref="CDD:133454"
+ gene 1365940..1366074
+ /locus_tag="SARI_01404"
+ CDS 1365940..1366074
+ /locus_tag="SARI_01404"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570443.1"
+ /db_xref="GI:161503331"
+ /translation="MVFNVISGLYDYFWLSARRFLPVGLFTTLLVSPSVTTLRWLEIL
+ "
+ gene complement(1365972..1366115)
+ /gene="rpsV"
+ /locus_tag="SARI_01405"
+ CDS complement(1365972..1366115)
+ /gene="rpsV"
+ /locus_tag="SARI_01405"
+ /inference="protein motif:HMMPfam:IPR012607"
+ /inference="similar to AA sequence:INSD:AAO69118.1"
+ /note="protein D; stationary-phase-induced
+ ribosome-associated; in Escherichia coli this protein
+ becomes associated with the ribosome; expression increases
+ during stationary phase"
+ /codon_start=1
+ /transl_table=11
+ /product="30S ribosomal subunit S22"
+ /protein_id="YP_001570444.1"
+ /db_xref="GI:161503332"
+ /db_xref="InterPro:IPR012607"
+ /translation="MKSNRQARHILGLDYRISNQRKVVTEGDTSSVVNNPTGRKRRAD
+ SQK"
+ misc_feature complement(1365984..1366115)
+ /gene="rpsV"
+ /locus_tag="SARI_01405"
+ /note="30S ribosomal subunit S22; Reviewed; Region: rpsV;
+ PRK10057"
+ /db_xref="CDD:182214"
+ gene complement(1366210..1366425)
+ /locus_tag="SARI_01406"
+ CDS complement(1366210..1366425)
+ /locus_tag="SARI_01406"
+ /inference="similar to AA sequence:SwissProt:P65642"
+ /note="'COG: NOG14119 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="biofilm-dependent modulation protein"
+ /protein_id="YP_001570445.1"
+ /db_xref="GI:161503333"
+ /translation="MFTYHSANTSAAQPALVNAIEQGLRAELGVVTEDDILMELTKWV
+ EASDNDILSDIYQQTINYVVSGQHPTL"
+ misc_feature complement(1366213..1366425)
+ /locus_tag="SARI_01406"
+ /note="biofilm-dependent modulation protein; Provisional;
+ Region: PRK11436"
+ /db_xref="CDD:183135"
+ gene complement(1366832..1366975)
+ /locus_tag="SARI_01408"
+ CDS complement(1366832..1366975)
+ /locus_tag="SARI_01408"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570446.1"
+ /db_xref="GI:161503335"
+ /translation="MPDLSYELSFLFSCLLKKQSIDHSTNPGWPADRGGMLPFICSSD
+ IEK"
+ gene 1366948..1367379
+ /locus_tag="SARI_01407"
+ CDS 1366948..1367379
+ /locus_tag="SARI_01407"
+ /inference="protein motif:HMMPfam:IPR003718"
+ /inference="similar to AA sequence:INSD:AAO69116.1"
+ /note="'KEGG: pfl:PFL_0043 1.7e-42 osmC; hydroperoxide
+ resistance protein OsmC K04063;
+ COG: COG1764 Predicted redox protein, regulator of
+ disulfide bond formation;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570447.1"
+ /db_xref="GI:161503334"
+ /db_xref="InterPro:IPR003718"
+ /translation="MIIHKKGQAHWEGDIKRGKGTVSTESGVLNQQPYGFNTRFEGAQ
+ GTNPEELIGAAHAACFSMALSLMLGEAGFTPTSIDTTADVSLDKVDTGFAITKIALQS
+ KVAVPDIDASTFDQIIQKAKAGCPVSQVLKAEITLDYQLNA"
+ misc_feature 1366960..1367361
+ /locus_tag="SARI_01407"
+ /note="peroxiredoxin, OsmC subfamily; Region:
+ osmo_induc_OsmC; TIGR03562"
+ /db_xref="CDD:234260"
+ gene 1367724..1368053
+ /gene="hdeB"
+ /locus_tag="SARI_01409"
+ CDS 1367724..1368053
+ /gene="hdeB"
+ /locus_tag="SARI_01409"
+ /inference="similar to AA sequence:REFSEQ:NP_805264.1"
+ /note="'COG: NOG11340 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="acid-resistance protein"
+ /protein_id="YP_001570448.1"
+ /db_xref="GI:161503336"
+ /translation="MNKFSLATAGIIVAALVTSVSVNAATDNTKTNVTPKGMSCQEFV
+ DLNPQTMAPVAFWVLNEDEDFKGGDYVDFQETETTAVPLAIELCKKNPQSELSKIKDE
+ IKKELSK"
+ misc_feature 1367745..1368050
+ /gene="hdeB"
+ /locus_tag="SARI_01409"
+ /note="acid-resistance protein; Provisional; Region: hdeB;
+ PRK11566"
+ /db_xref="CDD:183204"
+ gene 1368194..1368979
+ /locus_tag="SARI_01410"
+ CDS 1368194..1368979
+ /locus_tag="SARI_01410"
+ /inference="protein motif:HMMPfam:IPR010686"
+ /inference="similar to AA sequence:REFSEQ:YP_216549.1"
+ /note="'COG: NOG09007 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570449.1"
+ /db_xref="GI:161503337"
+ /db_xref="InterPro:IPR010686"
+ /translation="MKTLPLALFIIPFLAGCGANNTPPQTPVPGEKTSAKLRTLETGA
+ TAIQSRPPVEAISTYLDGFHFYSGDKNGQMEAHHYVTILNEDVMQAVIYDGNTKNARL
+ MGVEYIISERLFKTLPPEEKKLWHSHQYEVKSGSLVAPGLPQVADKALMSKIINTYGK
+ TWHTWHTDRDKTLPMGIPALMMGFTGEGQLDPTLLADRDRRLGIDTEAIKHERQDLPA
+ RPVIKGANAWEQGEVIQLQRAEGSGEHGRGDTAHFGTSEQSRR"
+ misc_feature 1368338..1368841
+ /locus_tag="SARI_01410"
+ /note="Protein of unknown function (DUF1264); Region:
+ DUF1264; pfam06884"
+ /db_xref="CDD:219217"
+ gene 1369109..1370893
+ /locus_tag="SARI_01411"
+ CDS 1369109..1370893
+ /locus_tag="SARI_01411"
+ /inference="protein motif:Gene3D:IPR013781"
+ /inference="protein motif:HMMPfam:IPR006047"
+ /inference="protein motif:HMMSmart:IPR006589"
+ /inference="protein motif:HMMTigr:IPR012768"
+ /note="'KEGG: sme:SMb21447 4.3e-147 glgB2; putative
+ 1,4-alpha-glucan branching enzyme protein K00700;
+ COG: COG0296 1,4-alpha-glucan branching enzyme;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570450.1"
+ /db_xref="GI:161503338"
+ /db_xref="InterPro:IPR006047"
+ /db_xref="InterPro:IPR006589"
+ /db_xref="InterPro:IPR012768"
+ /db_xref="InterPro:IPR013781"
+ /translation="MSSKIFCKSWGAEYIAADVVRFRLWATGQQKVVLRLAGKDYEML
+ TSGDGWFTSEVSGVAPGTEYNFVLSDGLVVPDPASRAQKTDVNGPSYVVNPGSYAWRN
+ TGWKGCRWEQAVVYEMHIGTFTPEGTFRAAIAKLPYLAELGVTVIEVMPVAQFGGERG
+ WGYDGVLLYAPHSAYGTPDDFKAFIDAAHGYGLSVVLDIVLNHFGPEGNYLPLLAPAF
+ FHKERMTPWGNGIAYDVDAVRRYIIEAPLYWLTEYHLDGLRFDAIDQIEDSSAKHVLV
+ EIAQRIREDITDRPIHLTTEDSRNIISLHPRDLDGYAPLFTAEWNDDFHNAVHVFATG
+ ETQSYYNDFADAPEKHLARALAEGFAYQGEISPQTGEPRGVKSTGQPPVAFVDFIQNH
+ DQVGNRAQGDRLITLAGAERAKVLLATLLLSPHIPLLFMGEEYGESRPFLFFTDYHGD
+ LARAVREGRAKEFADHAGENVPDPNAPEAFQRSKLNWKQQHSEEGKAWLAFTRELLLL
+ RQKHIVPLLSAARESSGTVLQTAPGFIAVSWRFPGGTLSLALNISATTVLLPDLPGKT
+ LFAWPNESTGSLSQHSLIVRLAQGESAS"
+ misc_feature 1369139..1369387
+ /locus_tag="SARI_01411"
+ /note="N-terminal Early set domain associated with the
+ catalytic domain of Maltooligosyl trehalose
+ trehalohydrolase (also called Glycosyltrehalose
+ trehalohydrolase) and similar proteins; Region:
+ E_set_MTHase_like_N; cd02853"
+ /db_xref="CDD:199883"
+ misc_feature 1369166..1370788
+ /locus_tag="SARI_01411"
+ /note="malto-oligosyltrehalose trehalohydrolase; Region:
+ trehalose_TreZ; TIGR02402"
+ /db_xref="CDD:233850"
+ misc_feature 1369334..1370644
+ /locus_tag="SARI_01411"
+ /note="Alpha amylase catalytic domain found in
+ Glycosyltrehalose trehalohydrolase (also called
+ Maltooligosyl trehalose Trehalohydrolase); Region:
+ AmyAc_GTHase; cd11325"
+ /db_xref="CDD:200464"
+ misc_feature order(1369889..1369891,1369994..1369996,1370285..1370287)
+ /locus_tag="SARI_01411"
+ /note="catalytic site [active]"
+ /db_xref="CDD:200464"
+ misc_feature order(1369994..1369996,1370000..1370002,1370072..1370074,
+ 1370084..1370086,1370285..1370290,1370297..1370299)
+ /locus_tag="SARI_01411"
+ /note="active site"
+ /db_xref="CDD:200464"
+ misc_feature 1370609..1370866
+ /locus_tag="SARI_01411"
+ /note="Domain of unknown function (DUF3459); Region:
+ DUF3459; pfam11941"
+ /db_xref="CDD:221332"
+ gene 1370890..1373418
+ /locus_tag="SARI_01412"
+ CDS 1370890..1373418
+ /locus_tag="SARI_01412"
+ /inference="protein motif:Gene3D:IPR013781"
+ /inference="protein motif:HMMPfam:IPR006047"
+ /inference="protein motif:HMMSmart:IPR006589"
+ /inference="protein motif:HMMTigr:IPR012767"
+ /note="'KEGG: ret:RHE_PE00008 4.7e-205 putative
+ maltooligosyl trehalose synthase protein;
+ COG: COG3280 Maltooligosyl trehalose synthase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570451.1"
+ /db_xref="GI:161503339"
+ /db_xref="InterPro:IPR006047"
+ /db_xref="InterPro:IPR006589"
+ /db_xref="InterPro:IPR012767"
+ /db_xref="InterPro:IPR013781"
+ /translation="MIPTATYRLQFRNGMTFDRAAALVPYLKNLGISHLYASPIFTAT
+ KASTHGYDVTDANEIDPSIGGREGFERLVAELKAQGLGLIIDIVPNHMASSLENAWWR
+ DVLEYGPESRYARHFDIDWSRRLTLPFLGDTFDAVLENGEIAIKPDPVTGKPTFAYYD
+ NYYPLAPATWQGREAEILALTDKAAIADLHERQPWKLMSWRDAARSLSYRRFFEVTGL
+ VGMRVEDKIVFDDTHRLILELVRTGAVDGLRIDHIDGLADPKAYLARLRQEVGPACYI
+ TVEKILAKGEQLPDDWPVSGTTGYEFIASLAEVLVDDEQIDNLRQAYETVTGAPVDMR
+ AELRAAKLLMVDRNFEGEFTRLLALALSIASELQIAQEESVVRQALRELLIAFPVYRT
+ YGTAEGLPPTDICLLHRIVERVKTLENPPPPEALTFLSRLLTGEVPTSSQEVATQFRV
+ RFQQLTGPLMAKSVEDTLFFRQNMGLALNEVGAEPVAHHFSIERFHHEMKTRQARQPD
+ ALSGTSTHDTKRGEDARARLYTLTEAPEQWSECLARWRQMNQTHVKFLKDGTAPKSAD
+ TWMLYQALTGVWPPTLQPQDETALTALKTRFEAFVEKALREAKLRTDWVDSNEAYETA
+ MLDYARHLLAPDNQPFLQDFYRSLQPFIRAGLVNSLTQSIIKLTAPGVPDIYQGSEAL
+ NFSLVDPDNRREPDFVTLAQQLGQLTPGVFSREESWLNGQVNQYVTAALLRLRQQNHD
+ LFRFGEYLPLRAVGKRADKIIAYARVNHDDVLIVVAPRLVFAECDGLLSQSHAGFWAE
+ TEIIIPGQLNRRRYRNALNQEMLTLEERLSLASHQGGVLVLMSD"
+ misc_feature 1370890..1373415
+ /locus_tag="SARI_01412"
+ /note="Maltooligosyl trehalose synthase [Carbohydrate
+ transport and metabolism]; Region: TreY; COG3280"
+ /db_xref="CDD:225819"
+ misc_feature 1370902..1373103
+ /locus_tag="SARI_01412"
+ /note="Alpha amylase catalytic domain found in
+ maltooligosyl trehalose synthase (MTSase); Region:
+ AmyAc_MTSase; cd11336"
+ /db_xref="CDD:200475"
+ misc_feature order(1371034..1371036,1371040..1371042,1371160..1371162,
+ 1371523..1371525,1371640..1371642,1371724..1371726,
+ 1371730..1371732,1372057..1372059,1372282..1372284,
+ 1372330..1372332,1372438..1372440,1372951..1372953,
+ 1372963..1372965)
+ /locus_tag="SARI_01412"
+ /note="active site"
+ /db_xref="CDD:200475"
+ misc_feature order(1371640..1371642,1371724..1371726,1372438..1372440)
+ /locus_tag="SARI_01412"
+ /note="catalytic site [active]"
+ /db_xref="CDD:200475"
+ gene 1373475..1375550
+ /locus_tag="SARI_01413"
+ CDS 1373475..1375550
+ /locus_tag="SARI_01413"
+ /inference="protein motif:Gene3D:IPR013780"
+ /inference="protein motif:Gene3D:IPR013781"
+ /inference="protein motif:Gene3D:IPR013783"
+ /inference="protein motif:HMMPfam:IPR004193"
+ /inference="protein motif:HMMPfam:IPR006047"
+ /inference="protein motif:HMMPIR:IPR013779"
+ /inference="protein motif:HMMSmart:IPR006589"
+ /inference="protein motif:HMMTigr:IPR011837"
+ /note="'KEGG: stm:STM1558 0. putative glycosyl hydrolase
+ K02438;
+ COG: COG1523 Type II secretory pathway, pullulanase PulA
+ and related glycosidases;
+ Psort location: cytoskeletal, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570452.1"
+ /db_xref="GI:161503340"
+ /db_xref="InterPro:IPR004193"
+ /db_xref="InterPro:IPR006047"
+ /db_xref="InterPro:IPR006589"
+ /db_xref="InterPro:IPR011837"
+ /db_xref="InterPro:IPR013779"
+ /db_xref="InterPro:IPR013780"
+ /db_xref="InterPro:IPR013781"
+ /db_xref="InterPro:IPR013783"
+ /translation="MTTNRTFEIRSGYNHTLGANYDGEGVNFAIFSAHAERVELCLYD
+ PSGKHEIARLELPEYTDEIWHGYVPNLQPGALYGYRVYGPYDPENGHRFNHNKLLIDP
+ YARELVGDILWNDAHFAYQLLHDDKDLTFDDQDSAPFTPKCRVIDPAEANWEDRQRPS
+ IPWSNAIIYETHVKGFTQLNSAIPEPLRGTFEGMGHKASVDYVKSLGITCVELLPVHW
+ FPDDQHLLDKGLKNFWGYNTLGFFAPATRYYGPKGIQGFRNMVRAFHDAGIEVILDVV
+ YNHTAEGNELGPTLSFKGIDNFSYYRTMPDQHRYYINDTGTGNTVNTSHPRVLQMVMD
+ SLRYWAESMHVDGFRFDLGTILGREPEGFDQRGGFFDAVTQDPVLAKLKLIGEPWDIG
+ PGGYQVGGFPPGWGEWNDKYRDTVREYWKGDNVTNDFAARLLGSGDLYDLRGRRPWSS
+ VNFITAHDGFTLNDLVSYNDKHNEANGEDNNDGHNDNRSCNYGAEGPTDDEGINAIRE
+ RQKRNFLTTLLFSHGTPMLLAGDEFGRSQMGNNNGYCQDSEISWIHWDNLPETANALR
+ EFTRRLIQLRATQPLLRRESWRDGLEIRWFNAGGGPQQSEQWDEGSTIGVCISRPDLQ
+ PEAGIWHDALLLFNPFEGSVPFRIPMWGEGGWMLELTTADNAQQGMRFTEERDFDLAG
+ RSIVLFRRP"
+ misc_feature 1373505..1375544
+ /locus_tag="SARI_01413"
+ /note="glycogen debranching enzyme GlgX; Region:
+ glgX_debranch; TIGR02100"
+ /db_xref="CDD:131155"
+ misc_feature 1373523..1373915
+ /locus_tag="SARI_01413"
+ /note="N-terminal Early set domain associated with the
+ catalytic domain of Glycogen debranching enzyme and
+ bacterial isoamylase (also called glycogen
+ 6-glucanohydrolase); Region: E_set_GDE_Isoamylase_N;
+ cd02856"
+ /db_xref="CDD:199886"
+ misc_feature 1373928..1375202
+ /locus_tag="SARI_01413"
+ /note="Alpha amylase catalytic domain found in glycogen
+ debranching enzymes; Region: AmyAc_Glg_debranch; cd11326"
+ /db_xref="CDD:200465"
+ misc_feature order(1374519..1374521,1374525..1374530,1374633..1374635,
+ 1374843..1374848)
+ /locus_tag="SARI_01413"
+ /note="active site"
+ /db_xref="CDD:200465"
+ misc_feature order(1374525..1374527,1374633..1374635,1374846..1374848)
+ /locus_tag="SARI_01413"
+ /note="catalytic site [active]"
+ /db_xref="CDD:200465"
+ gene complement(1375731..1376933)
+ /locus_tag="SARI_01414"
+ CDS complement(1375731..1376933)
+ /locus_tag="SARI_01414"
+ /inference="protein motif:FPrintScan:IPR001176"
+ /inference="protein motif:HMMPfam:IPR004839"
+ /inference="similar to AA sequence:REFSEQ:YP_150572.1"
+ /note="'KEGG: spt:SPA1313 1.7e-216 putative
+ aminotransferase K00842;
+ COG: COG1168 Bifunctional PLP-dependent enzyme with
+ beta-cystaTHIonase and maltose regulon repressor
+ activities;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570453.1"
+ /db_xref="GI:161503341"
+ /db_xref="InterPro:IPR001176"
+ /db_xref="InterPro:IPR004839"
+ /translation="MDFNQIINRNNTGSIKWDFIERHFGDGAGKLLPMWVSDFDFACP
+ PEVQAALHQRIEHGVFGYSERDEAYFNALLHWFSSRHQLTLKQEWVCSVEGVVPGLAL
+ LVQMLTHPGDGVVVQGPYYGSFAKIITLNGRRLLENPLSESPNDGYQMDFCQLERLFR
+ HAHPPLMILCNPHNPTGRCWSANELEQLLLLCETYDVTLISDEIWADLLLPGETFTSV
+ LHLGERWHKRVISATAASKTFGLSSLRISNFLIPDPTLRQRFLSRLDAHGLDVFNALS
+ VQAATTAWNESRQWLDSLLDYLAENRRWFVEQAAEYLPWARIIPAQGTYLLWMDCKKL
+ GLDDEQLKWVMADVAGIAPSMGSGFGPAGSGFVRLNLGCPRTYLEMAMDGLKRISVNT
+ IKGVSTGG"
+ misc_feature complement(1375773..1376933)
+ /locus_tag="SARI_01414"
+ /note="Bifunctional PLP-dependent enzyme with
+ beta-cystathionase and maltose regulon repressor
+ activities [Amino acid transport and metabolism]; Region:
+ MalY; COG1168"
+ /db_xref="CDD:224090"
+ misc_feature complement(1375773..1376840)
+ /locus_tag="SARI_01414"
+ /note="Aspartate aminotransferase family. This family
+ belongs to pyridoxal phosphate (PLP)-dependent aspartate
+ aminotransferase superfamily (fold I). Pyridoxal phosphate
+ combines with an alpha-amino acid to form a compound
+ called a Schiff base or aldimine...; Region: AAT_like;
+ cd00609"
+ /db_xref="CDD:99734"
+ misc_feature complement(order(1376199..1376201,1376223..1376228,
+ 1376232..1376234,1376319..1376321,1376412..1376414,
+ 1376571..1376573,1376643..1376651))
+ /locus_tag="SARI_01414"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:99734"
+ misc_feature complement(order(1376097..1376099,1376106..1376108,
+ 1376199..1376207,1376340..1376342,1376541..1376543,
+ 1376640..1376642))
+ /locus_tag="SARI_01414"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99734"
+ misc_feature complement(1376223..1376225)
+ /locus_tag="SARI_01414"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:99734"
+ gene complement(1376946..1378397)
+ /locus_tag="SARI_01415"
+ CDS complement(1376946..1378397)
+ /locus_tag="SARI_01415"
+ /inference="protein motif:HMMPfam:IPR004770"
+ /inference="protein motif:HMMTigr:IPR004770"
+ /inference="similar to AA sequence:INSD:AAL20474.1"
+ /note="'COG: COG1757 Na+/H+ antiporter;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="sodium/proton antiporter"
+ /protein_id="YP_001570454.2"
+ /db_xref="GI:448236227"
+ /db_xref="InterPro:IPR004770"
+ /translation="MSASQNKKKMLSLGLALIPVISMLLLLIIGYGIMGLRIEPLLLC
+ SAAVAAGIAWWQGYCWEDIINSVVDKLAKAMPVIMILICVGGLIGTWMFSGTIPYMVY
+ WGLKLISPEYILIAAFFLTSVVSVCTGTSWGSAGTVGVALMGVAAGLDVSLAAAAGAV
+ VSGAYFGDKISPLSDSTNFAAIVADTTLFEHIQHLLWTTLPSFLLAAVVYLIAGHSNM
+ LGEVATPQRVTDIIHSLESLYHFNIVLILPPVIVLWGAIRKKPVIPLMLSACVLALFL
+ GVIMQGLSIKQGLDAFIDGFDIAMFPQGAEGVVADVPRLLNRGGMFSMMGTILLVFCA
+ FSFAGALTLTGALTIIINRLLTIIHSVGQLIAATIGTTILVTGATSDGKLALLVPAEL
+ FKDAYRRMGLDTKNLSRTIEDAGTVIEPLLPWTSAGVYMATTLGVSTLDLLPWAIQCY
+ AAIFFALIYGFSGVGIARTTSASEKSPQSSVTE"
+ misc_feature complement(1376991..1378373)
+ /locus_tag="SARI_01415"
+ /note="Na+/H+ antiporter NhaC; Region: antiport_nhaC;
+ TIGR00931"
+ /db_xref="CDD:188097"
+ gene complement(1378510..1379547)
+ /locus_tag="SARI_01416"
+ CDS complement(1378510..1379547)
+ /locus_tag="SARI_01416"
+ /inference="protein motif:FPrintScan:IPR000843"
+ /inference="protein motif:HMMPfam:IPR000843"
+ /inference="protein motif:HMMPfam:IPR001761"
+ /inference="protein motif:HMMSmart:IPR000843"
+ /inference="protein motif:ScanRegExp:IPR000843"
+ /inference="protein motif:superfamily:IPR010982"
+ /inference="similar to AA sequence:REFSEQ:NP_460514.1"
+ /note="'KEGG: efa:EF1922 7.0e-07 transcriptional
+ regulator, LacI family/carbohydrate kinase, PfkB family
+ protein K00852;
+ COG: COG1609 Transcriptional regulators;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570455.1"
+ /db_xref="GI:161503343"
+ /db_xref="InterPro:IPR000843"
+ /db_xref="InterPro:IPR001761"
+ /db_xref="InterPro:IPR010982"
+ /translation="MATIKDVASLAGVSTATVSRVINQTAWVEPVTRGRVEKAMRDLN
+ YRRNAAAIALAKRSGDMLGLLTGNLADPFFARLARGVEDVSRKQQYRLMVCSGGHDEE
+ MEKAGLDFLINQGCEAIVVHASRLPDKELQRYAAHFPALVVVNRYIAGMANRCIWLEN
+ RSAARQATRYLLENGHRRIACVTSDLPIIDRQERLDGYRQALEEYGISPDPRWVISVP
+ FNEEGGERAAHQLINSRLPLTAAVTFNDVMAAGIMRILHQRGVHLPQQLSIVGFDDVV
+ LARYLYPALTTMHYPVEQMARCAAQMAIQLYQGVTPPPSSNRFKAELVIRDSVAPFFL
+ GKCVVNSKDCD"
+ misc_feature complement(1378555..1379544)
+ /locus_tag="SARI_01416"
+ /note="Transcriptional regulators [Transcription]; Region:
+ PurR; COG1609"
+ /db_xref="CDD:224525"
+ misc_feature complement(1379380..1379535)
+ /locus_tag="SARI_01416"
+ /note="Helix-turn-helix (HTH) DNA binding domain of the
+ LacI family of transcriptional regulators; Region:
+ HTH_LacI; cd01392"
+ /db_xref="CDD:143331"
+ misc_feature complement(order(1379383..1379388,1379392..1379397,
+ 1379404..1379406,1379413..1379415,1379452..1379454,
+ 1379461..1379466,1379479..1379481,1379488..1379493,
+ 1379497..1379511,1379533..1379535))
+ /locus_tag="SARI_01416"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:143331"
+ misc_feature complement(1379386..1379415)
+ /locus_tag="SARI_01416"
+ /note="domain linker motif; other site"
+ /db_xref="CDD:143331"
+ misc_feature complement(1378564..1379367)
+ /locus_tag="SARI_01416"
+ /note="Ligand binding domain of DNA transcription
+ iso-repressor GalS, which is one of two regulatory
+ proteins involved in galactose transport and metabolism;
+ Region: PBP1_GalS_like; cd06270"
+ /db_xref="CDD:107265"
+ misc_feature complement(order(1378705..1378710,1378786..1378788,
+ 1378882..1378887,1379206..1379208,1379218..1379220,
+ 1379260..1379262,1379266..1379277,1379302..1379304,
+ 1379311..1379313,1379326..1379328,1379344..1379346,
+ 1379365..1379367))
+ /locus_tag="SARI_01416"
+ /note="dimerization interface (closed form) [polypeptide
+ binding]; other site"
+ /db_xref="CDD:107265"
+ misc_feature complement(order(1378729..1378731,1378813..1378815,
+ 1378891..1378893,1378966..1378968,1379182..1379184,
+ 1379329..1379331))
+ /locus_tag="SARI_01416"
+ /note="ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:107265"
+ gene complement(1379569..1379952)
+ /locus_tag="SARI_01417"
+ CDS complement(1379569..1379952)
+ /locus_tag="SARI_01417"
+ /inference="protein motif:HMMPfam:IPR006440"
+ /inference="protein motif:HMMTigr:IPR006440"
+ /inference="similar to AA sequence:REFSEQ:ZP_00824095.1"
+ /note="'COG: COG3654 Prophage maintenance system killer
+ protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570456.1"
+ /db_xref="GI:161503344"
+ /db_xref="InterPro:IPR006440"
+ /translation="MIWVSAQEVIAFHDRILQRFPGVVGLSDPGRAQALIYRVQNRVH
+ YEGVTDLFELAATYWVAIARGHIFHDGNKRTAFFVTMAFLRRNGIRIHDTDNTLENLT
+ VEAATGEKTVDQLAQYLRKQVDDPL"
+ misc_feature complement(1379581..1379940)
+ /locus_tag="SARI_01417"
+ /note="Prophage maintenance system killer protein [General
+ function prediction only]; Region: Doc; COG3654"
+ /db_xref="CDD:226180"
+ gene complement(1379949..1380170)
+ /locus_tag="SARI_01418"
+ CDS complement(1379949..1380170)
+ /locus_tag="SARI_01418"
+ /inference="protein motif:HMMPfam:IPR003756"
+ /inference="protein motif:HMMTigr:IPR006442"
+ /inference="similar to AA sequence:REFSEQ:ZP_00824096.1"
+ /note="'COG: COG2161 Antitoxin of toxin-antitoxin
+ stability system;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570457.1"
+ /db_xref="GI:161503345"
+ /db_xref="InterPro:IPR003756"
+ /db_xref="InterPro:IPR006442"
+ /translation="MQTYTSTQARANISTVLDTALNGEPVEITRRDGSAAVLISKAEF
+ EAWQNAKLDAEFDAIMQRHEHTIRALTDR"
+ misc_feature complement(<1380006..1380170)
+ /locus_tag="SARI_01418"
+ /note="Antitoxin Phd_YefM, type II toxin-antitoxin system;
+ Region: PhdYeFM_antitox; pfam02604"
+ /db_xref="CDD:217137"
+ gene 1381094..1381396
+ /locus_tag="SARI_01419"
+ CDS 1381094..1381396
+ /locus_tag="SARI_01419"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570458.1"
+ /db_xref="GI:161503346"
+ /translation="MKNNGEWKGSRKSVAAASVQTSIRHPIHVRAAALFHGETQAVDV
+ HLDHSGIAPKDGQIFAYDAKYGQFIPVMSGGGTMIQRNRRAKGRKYAGLLAVRKSK"
+ gene complement(1381516..1382940)
+ /locus_tag="SARI_01420"
+ CDS complement(1381516..1382940)
+ /locus_tag="SARI_01420"
+ /inference="similar to AA sequence:REFSEQ:YP_001280221.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570459.1"
+ /db_xref="GI:161503347"
+ /translation="MLNFKELDKDGKEFELLIRELLFSKGFKVYWSGVGPDGGRDLVC
+ IEEHKSFFAPSQKKWLIQCKHNANGGGSVGIKDLDDIVDSCSQHGATGFILACSTQPS
+ SAVVDRLESITNNPKNDITAIYWDYVFIEQALSTPALWRVAQRFFPVSSEATSWKVYA
+ TENPNHWVVNYKGYYFHLANRIGSYHEHHFESISKRIEEIESIEMPKNHFIRVRSVYF
+ DDKNGNYTWYLDYMYPNADRPKYSSAEIKHYLGDGYALEDGQCYLFDVKLRSYFQFSD
+ HYDPDHYDYYSPYINNYLYGMKREGNWDDHEEAYRSDQELIEKLEACRNVSFEKLAEK
+ FKELDFCRLMRSSNARLEDLDKFHLQRNWSDLISSLDIETDRFFSAWFIFDVNNVNRF
+ HELVSYIPQHVLYNFRLTRAYIYLPERDNRSVLDSNDDEYIFELTLSIHPAELNNKFI
+ AREKLNEYFDLILNGINEFQSKYY"
+ misc_feature complement(<1382644..1382913)
+ /locus_tag="SARI_01420"
+ /note="Restriction endonuclease; Region: Mrr_cat;
+ pfam04471"
+ /db_xref="CDD:218102"
+ gene 1384002..1385525
+ /locus_tag="SARI_01421"
+ CDS 1384002..1385525
+ /locus_tag="SARI_01421"
+ /inference="protein motif:FPrintScan:IPR002296"
+ /inference="protein motif:HMMPfam:IPR003356"
+ /inference="protein motif:HMMTigr:IPR004546"
+ /inference="similar to AA sequence:REFSEQ:ZP_00926477.1"
+ /note="'KEGG: yps:YPTB3882 6.0e-228 hsdM; putative type I
+ site-specific deoxyribonuclease LldI chain K03427;
+ COG: COG0286 Type I restriction-modification system
+ methyltransferase subunit;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570460.1"
+ /db_xref="GI:161503348"
+ /db_xref="InterPro:IPR002296"
+ /db_xref="InterPro:IPR003356"
+ /db_xref="InterPro:IPR004546"
+ /translation="MNDKITQDTINKALWAACDTFRGTISADTYKDFILTMLFLKYIS
+ DVWQDHYDEYKKQYGDAPELIEAMMANERFVLPKNASFYALYERRHEPGNGERIDQAL
+ HAIEEANGTKLKDAGKSVFQDISFNTDRLGEEKQKNTILRHLLEDFAGEALNLKPSRV
+ GTLDVIGNAYEYLIKNFAASGGQKAGEFYTPPEVSDLIAELLDPQPGDTICDPACGSG
+ SLLMKCGRKIVSGHNSRNYALFGQEAIGSTWSLAKMNMFLHGEDNHKIEWGDTIRNPK
+ LLDKNGDLMLFDIVTANPPFSLDKWGHDEAENDKFGRFRRGVPPKTKGDYAFILHMIE
+ TLKPGTGRMGVVVPHGVLFRGSSEGKIRQKLIDENLLDAVIGLPEKLFYGTGIPAAIL
+ IFKKQKVDDKVLFIDASREFKAGKNQNQLSEDNIRTIVKTYRNGDNVEKYAYLASLKE
+ IQDNDYNLNIPRYVDTFEEEEEIDLLAVRAEREELKAELAKLEVEMTGYLKELGYGG"
+ misc_feature 1384014..1385417
+ /locus_tag="SARI_01421"
+ /note="Type I restriction-modification system
+ methyltransferase subunit [Defense mechanisms]; Region:
+ HsdM; COG0286"
+ /db_xref="CDD:223363"
+ misc_feature 1384029..1384445
+ /locus_tag="SARI_01421"
+ /note="HsdM N-terminal domain; Region: HsdM_N; pfam12161"
+ /db_xref="CDD:221448"
+ misc_feature 1384620..1385048
+ /locus_tag="SARI_01421"
+ /note="Methyltransferase domain; Region: Methyltransf_26;
+ pfam13659"
+ /db_xref="CDD:222295"
+ gene 1385515..1386753
+ /locus_tag="SARI_01422"
+ CDS 1385515..1386753
+ /locus_tag="SARI_01422"
+ /inference="protein motif:HMMPfam:IPR000055"
+ /inference="similar to AA sequence:REFSEQ:ZP_00926478.1"
+ /note="'KEGG: gox:GOX2568 2.7e-42 type I
+ restriction-modification enzyme S subunit K01154;
+ COG: COG0732 Restriction endonuclease S subunits;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570461.1"
+ /db_xref="GI:161503349"
+ /db_xref="InterPro:IPR000055"
+ /translation="MVAKDWKSVTLKELLDGPIKNGYSPNATDSETGYWVLGLGALGD
+ EGINSSEIKPVLPEERVLQNILRTDDFLVSRSNTPDKVGRSIRFRNEIENCSYPDLMM
+ RFRIDENKADKAFIEHQLKSAAVRTYFKNCAAGSSSTMVKINKGILEKTPLVVPPVKE
+ QKKIAQILSTWDKAISVTEKLLTNSQQQKKALMQQLLSGKKRLLDENGVMFSGEWEVV
+ RLKQLIHEEKKRNRDNHIQRVLSVTNHSGFVLPEEQFSKRVASEDVSTYKIVKKNQYG
+ YNPSRLNVGSFARLDNYDEGVLSPMYVVFSINHERLNSDYFLNWMSSNEAKQRIAGST
+ QGSVRDSVGFDALCSFSFSLPTLMEQQKIAAVLSAADAEMSMLEKKLACLKEEKKALM
+ QQLLTGKRRVKVESEETVSA"
+ misc_feature 1385521..1386060
+ /locus_tag="SARI_01422"
+ /note="Type I restriction modification DNA specificity
+ domain; Region: Methylase_S; pfam01420"
+ /db_xref="CDD:216490"
+ misc_feature 1385530..1386633
+ /locus_tag="SARI_01422"
+ /note="Restriction endonuclease S subunits [Defense
+ mechanisms]; Region: HsdS; COG0732"
+ /db_xref="CDD:223804"
+ gene 1386775..1389042
+ /locus_tag="SARI_01423"
+ CDS 1386775..1389042
+ /locus_tag="SARI_01423"
+ /inference="protein motif:HMMPfam:IPR006935"
+ /inference="protein motif:HMMPfam:IPR007409"
+ /inference="protein motif:HMMSmart:IPR014001"
+ /inference="protein motif:HMMTigr:IPR004473"
+ /inference="protein motif:superfamily:IPR009000"
+ /note="'KEGG: yps:YPTB3879 0. possible type I restriction
+ enzyme (restriction subunit) K01153;
+ COG: COG0610 Type I site-specific restriction-modification
+ system, R (restriction) subunit and related helicases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570462.1"
+ /db_xref="GI:161503350"
+ /db_xref="InterPro:IPR004473"
+ /db_xref="InterPro:IPR006935"
+ /db_xref="InterPro:IPR007409"
+ /db_xref="InterPro:IPR009000"
+ /db_xref="InterPro:IPR014001"
+ /db_xref="REBASE:SenAZORF1421P"
+ /translation="MNQPYTPKFQEEYSAKIPALTLLTSLGWTFLSPKQIMDYRGYKQ
+ DEVVLRPVLREELSKRSFMAGGKICQLSEKALDNLISQVCSPALNEGLLKANERMYNH
+ LLYGIAVTEFVDGKKVTPTIALIDWEHPENNQFHFTEEFTVLRSGGVETRRPDIVCFV
+ NGIPLAVIEAKSPAGHGKKGPTIDEGISQSIRNQFNDEIPQLFAYSQLLLSINGHDGR
+ YGTCHTPMKFWAAWREEDITDAQMYALRNHPLSTEQIHALFDHRPSADLNWYQQLIAG
+ GELAVSGQDKLLISLLSPERLLEMTRFFTLFDKKTGKIVARYQQVFGIKRLLERISTR
+ RPDGGREGGVIWHTTGSGKSYTMVFLSKALILHDSLKQCRIVVVTDRIDLEEQLSGTF
+ ASGGELAGKKDKANAMATSGQMLAKQIGSGKERIIFTLIQKFNSATKLPECVNTSPDI
+ IVLIDEGHRSQGGENHVRMKLALPNAAFVAFTGTPLLKEDKTTNKFGPIVHAYTMQRA
+ VEDKAVTPLLYEERIPDLEVNDRAIDAWFDRITDGLSDAQKADLKRKYARKGEVYSAD
+ DRIRLIALDIATHFSKNIDEGLKGQLACDSKISAIKYKKYLDEAGLFESAVVISPPDT
+ REGNTEVDESKLPEVTKWWKDNVGTQDESAYTRDIISRFDTDDKLKLLIVVDKLLTGF
+ DEPKNTVLYIDKPLKSHNLIQAIARVNRLHPLKKFGLLIDYRGILAELDTTIGKYQDL
+ ASRTQGGYDSRNCIA"
+ misc_feature 1386838..1388991
+ /locus_tag="SARI_01423"
+ /note="type I site-specific deoxyribonuclease, HsdR
+ family; Region: hsdR; TIGR00348"
+ /db_xref="CDD:232933"
+ misc_feature 1387165..1387449
+ /locus_tag="SARI_01423"
+ /note="Type I restriction enzyme R protein N terminus
+ (HSDR_N); Region: HSDR_N; pfam04313"
+ /db_xref="CDD:218021"
+ misc_feature 1387795..1388229
+ /locus_tag="SARI_01423"
+ /note="DEAD-like helicases superfamily. A diverse family
+ of proteins involved in ATP-dependent RNA or DNA
+ unwinding. This domain contains the ATP-binding region;
+ Region: DEXDc; cd00046"
+ /db_xref="CDD:238005"
+ misc_feature order(1387822..1387833,1387840..1387842)
+ /locus_tag="SARI_01423"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238005"
+ misc_feature 1388137..1388148
+ /locus_tag="SARI_01423"
+ /note="putative Mg++ binding site [ion binding]; other
+ site"
+ /db_xref="CDD:238005"
+ gene complement(1389006..1389146)
+ /locus_tag="SARI_01425"
+ CDS complement(1389006..1389146)
+ /locus_tag="SARI_01425"
+ /inference="similar to AA sequence:INSD:"
+ /note="'COG: COG0038 Chloride channel protein EriC;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570463.1"
+ /db_xref="GI:161503352"
+ /translation="MHRLHAYPDLRAMFRRLLIATLIGILAALAVAAFRHAMQFLESY
+ PP"
+ gene 1389039..1389137
+ /locus_tag="SARI_01424"
+ CDS 1389039..1389137
+ /locus_tag="SARI_01424"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570464.1"
+ /db_xref="GI:161503351"
+ /translation="MTEGGDSQRRENTDERSDQQATKHRAQIRISV"
+ gene complement(1389281..1390429)
+ /locus_tag="SARI_01426"
+ CDS complement(1389281..1390429)
+ /locus_tag="SARI_01426"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR000644"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR000644"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR005892"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:INSD:AAV77308.1"
+ /note="'KEGG: bur:Bcep18194_C7553 1.8e-132 ABC glycine
+ betaine/L-proline transporter, ATPase subunit K05847;
+ COG: COG1125 ABC-type proline/glycine betaine transport
+ systems, ATPase components;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570465.1"
+ /db_xref="GI:161503353"
+ /db_xref="InterPro:IPR000644"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR005892"
+ /translation="MIKLENLTKQFVQKKGQPLKAVDNVNLNVPEGEMCVLLGPSGCG
+ KTTTLKMINRLIAPSSGNILINDENTNDMDTVTLRRNIGYVIQQIGLFPNMTIEENIT
+ VVPRMLGWDKARCKQRAEELMEMVALDARKFLHRYPKEMSGGQQQRIGVIRALAADPP
+ VLLMDEPFGAVDPINREVIQNQFLDMQRKLKKTVMLVSHDIDEALKLGDRIAVFRQGR
+ IVQCASPDELLAKPANEFVGSFVGQDRTLKRLLLVSAGDVTDQQPTITARPSTPLSEA
+ FGIMDENDIRAITVIDNDGKPLGFVKRREARNASGTCADITHPFRITGKAEDNLRIVL
+ SRLYESNTSWMPIVDEDGRYNGEISQDYIADYLSSGRTRRALNIHESS"
+ misc_feature complement(1389329..1390429)
+ /locus_tag="SARI_01426"
+ /note="ABC-type proline/glycine betaine transport systems,
+ ATPase components [Amino acid transport and metabolism];
+ Region: OpuBA; COG1125"
+ /db_xref="CDD:224050"
+ misc_feature complement(1389689..1390426)
+ /locus_tag="SARI_01426"
+ /note="ATP-binding cassette domain of the osmoprotectant
+ transporter; Region: ABC_OpuCA_Osmoprotection; cd03295"
+ /db_xref="CDD:213262"
+ misc_feature complement(1390292..1390315)
+ /locus_tag="SARI_01426"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213262"
+ misc_feature complement(order(1389833..1389835,1389932..1389937,
+ 1390169..1390171,1390289..1390297,1390301..1390306))
+ /locus_tag="SARI_01426"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213262"
+ misc_feature complement(1390169..1390180)
+ /locus_tag="SARI_01426"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213262"
+ misc_feature complement(1389980..1390009)
+ /locus_tag="SARI_01426"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213262"
+ misc_feature complement(1389932..1389949)
+ /locus_tag="SARI_01426"
+ /note="Walker B; other site"
+ /db_xref="CDD:213262"
+ misc_feature complement(1389914..1389925)
+ /locus_tag="SARI_01426"
+ /note="D-loop; other site"
+ /db_xref="CDD:213262"
+ misc_feature complement(1389827..1389847)
+ /locus_tag="SARI_01426"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213262"
+ misc_feature complement(1389332..1389646)
+ /locus_tag="SARI_01426"
+ /note="This cd contains two tandem repeats of the
+ cystathionine beta-synthase (CBS pair) domains in
+ association with the ABC transporter OpuCA. OpuCA is the
+ ATP binding component of a bacterial solute transporter
+ that serves a protective role to cells growing...; Region:
+ CBS_pair_ABC_OpuCA_assoc; cd04582"
+ /db_xref="CDD:239955"
+ gene complement(1390429..1391076)
+ /locus_tag="SARI_01427"
+ CDS complement(1390429..1391076)
+ /locus_tag="SARI_01427"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="similar to AA sequence:REFSEQ:NP_460452.1"
+ /note="'KEGG: lwe:lwe1439 1.3e-42 glycine
+ betaine/L-proline ABC transporter, permease/glycine
+ betaine/L-proline-binding protein;
+ COG: COG1174 ABC-type proline/glycine betaine transport
+ systems, permease component;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570466.1"
+ /db_xref="GI:161503354"
+ /db_xref="InterPro:IPR000515"
+ /translation="MDTIHYMLDNAGYLASLTFQHLWLVALAVGLAIIIGVPLGVLIV
+ RHKWLATPVLGVATLLLTIPSIALFGLMIPLFSLIGQGIGVLPAVTAVFLYSLLPIVR
+ NTHTALDSLPPGLREAGRGIGMTFWQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIA
+ AVIGAGGLGLLLLNGISGSDIRMLIAGALMICLLAIVLDWLLHRLQVVLTPKGIR"
+ misc_feature complement(<1390636..1390944)
+ /locus_tag="SARI_01427"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(1390642..1390647,1390687..1390689,
+ 1390738..1390740,1390747..1390752,1390762..1390764,
+ 1390768..1390773,1390780..1390782,1390786..1390788,
+ 1390792..1390797,1390858..1390860,1390864..1390869,
+ 1390876..1390905,1390909..1390920))
+ /locus_tag="SARI_01427"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(1390858..1390902)
+ /locus_tag="SARI_01427"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(1390666..1390668,1390678..1390683,
+ 1390699..1390737))
+ /locus_tag="SARI_01427"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene complement(1391086..1391988)
+ /locus_tag="SARI_01428"
+ CDS complement(1391086..1391988)
+ /locus_tag="SARI_01428"
+ /inference="protein motif:HMMPfam:IPR007210"
+ /inference="similar to AA sequence:REFSEQ:NP_460453.1"
+ /note="'KEGG: lwe:lwe1443 4.7e-31 opuCC; glycine
+ betaine/L-proline ABC transporter, glycine
+ betaine/L-proline-binding protein;
+ COG: COG1732 Periplasmic glycine betaine/choline-binding
+ (lipo)protein of an ABC-type transport system
+ (osmoprotectant binding protein);
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570467.1"
+ /db_xref="GI:161503355"
+ /db_xref="InterPro:IPR007210"
+ /translation="MRFKKHLLGWLAATLLFSSQTQAAPLVLATKSFTEQHILSAMTV
+ QYLQKKGFQVQPQTNIAAVISRNAMVNKQIDITWEYTGTSLIIFNRIDKRMNPQETYD
+ TVKRLDAKLGLVWLKPADMNNTYAFAMQRKRAEAENITTISQMVAKIEQVRQNDPDHN
+ WMLGLDLEFAGRSDGMKPLQQAYQMQLDRPQIRQMDPGLVYNAVRDGLVDAGLVYTTD
+ GRVKGFDLKVLEDDKGFFPSYAVTPVVRKEVLKANPGLDDALNTLSGLLNNDVISTLN
+ AQVDIDHRTPQQVAHQFLQDKGLL"
+ misc_feature complement(1391098..1391988)
+ /locus_tag="SARI_01428"
+ /note="Periplasmic glycine betaine/choline-binding
+ (lipo)protein of an ABC-type transport system
+ (osmoprotectant binding protein) [Cell envelope
+ biogenesis, outer membrane]; Region: OpuBC; COG1732"
+ /db_xref="CDD:224646"
+ gene complement(1392017..1392751)
+ /locus_tag="SARI_01429"
+ CDS complement(1392017..1392751)
+ /locus_tag="SARI_01429"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="similar to AA sequence:REFSEQ:NP_460454.1"
+ /note="'KEGG: lwe:lwe1439 2.5e-39 glycine
+ betaine/L-proline ABC transporter, permease/glycine
+ betaine/L-proline-binding protein;
+ COG: COG1174 ABC-type proline/glycine betaine transport
+ systems, permease component;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570468.1"
+ /db_xref="GI:161503356"
+ /db_xref="InterPro:IPR000515"
+ /translation="MQTGRHTAMYTLTLKRVLGFTIVILLLLALFIWGIGLETLKARQ
+ VDLLYLGQRHLMLVFTSMFFALLVGIPSGILLSRPAAKGFAEYVMQIFNVGNTLPPLA
+ VLALAMVIIGIGDTPAIVALFLASLLPIVRNTYAGLCSVPASLIEAANGIGMTKWQRL
+ RQVELPNAWPVMLSGIRIATAINVGTAPLAFLIGASSYGELIFPGIYLNDFPTLILGA
+ TATALFALILDTLLAWLGRRLSPHTA"
+ misc_feature complement(1392068..1392592)
+ /locus_tag="SARI_01429"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(1392068..1392073,1392080..1392085,
+ 1392089..1392094,1392101..1392106,1392134..1392139,
+ 1392176..1392181,1392188..1392199,1392218..1392220,
+ 1392227..1392232,1392272..1392274,1392323..1392325,
+ 1392332..1392337,1392347..1392349,1392353..1392358,
+ 1392365..1392367,1392371..1392373,1392377..1392382,
+ 1392428..1392430,1392434..1392439,1392446..1392475,
+ 1392479..1392490,1392521..1392523,1392536..1392541,
+ 1392548..1392553))
+ /locus_tag="SARI_01429"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(1392182..1392199,1392428..1392472))
+ /locus_tag="SARI_01429"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(1392104..1392106,1392134..1392136,
+ 1392143..1392145,1392179..1392181,1392395..1392397,
+ 1392428..1392430))
+ /locus_tag="SARI_01429"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(1392251..1392253,1392263..1392268,
+ 1392284..1392322))
+ /locus_tag="SARI_01429"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene complement(1393032..1393646)
+ /locus_tag="SARI_01430"
+ CDS complement(1393032..1393646)
+ /locus_tag="SARI_01430"
+ /inference="protein motif:HMMPfam:IPR010395"
+ /inference="similar to AA sequence:INSD:AAX65418.1"
+ /note="'binds to the twin-arginine signal peptides of
+ certain proteins, including dimethylsulfoxide reductase
+ and trimethylamine N-oxide reductase that are translocated
+ to the cytoplasmic membrane'"
+ /codon_start=1
+ /transl_table=11
+ /product="twin-argninine leader-binding protein DmsD"
+ /protein_id="YP_001570469.1"
+ /db_xref="GI:161503357"
+ /db_xref="InterPro:IPR010395"
+ /translation="MTTFLQRDDFAVTARVLGALFYYSPESNETAPLVQALLTDDWQA
+ QWPLDADALAPVAAMFKTHSEESLPQAWQRLFIGPYALPSPPWGSVWLDRESVLFGDS
+ TLALRQWMRENGIQFEMQQNEPEDHFGSLLLLAAWLAENGRHHECEQLLAWHLFPWSS
+ RFLDVFIDHAGHPFYQALGQLARLTLAQWQAQLIIPVAVKPLFR"
+ misc_feature complement(1393035..1393646)
+ /locus_tag="SARI_01430"
+ /note="twin-argninine leader-binding protein DmsD;
+ Provisional; Region: PRK11621"
+ /db_xref="CDD:236938"
+ gene complement(1393689..1394546)
+ /locus_tag="SARI_01431"
+ CDS complement(1393689..1394546)
+ /locus_tag="SARI_01431"
+ /inference="protein motif:HMMPfam:IPR007059"
+ /inference="similar to AA sequence:REFSEQ:YP_216500.1"
+ /note="'KEGG: eci:UTI89_C1777 1.5e-119 ynfH; anaerobic
+ dimethyl sulfoxide reductase chain YnfH K07312;
+ COG: COG3302 DMSO reductase anchor subunit;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570470.1"
+ /db_xref="GI:161503358"
+ /db_xref="InterPro:IPR007059"
+ /translation="MGSGWHEWPLVLFTVLGQCVVGALIVSGLGWLIAKDDTIARQRI
+ VRSMFFLWLVMGVGFLASIMHLGSPVRAFNSLNRVGASALSNEIAAGSVFFAVGGIWW
+ LVAVLGKMPPALGKVWLLVSMALGVAFIWAMTRVYQIDTVPTWYNGYTTLAFFLTAFL
+ CGPVFAALLLRIARVLFCSVTFASISGLALVVCVAVIVLQGLSLSTLHSSVQQASHLE
+ PDYGMLQVWRIVLLAAGLGCWLCPLIRRREPHTIGLLLGVVLVLAGEIIGRGLFYGLH
+ MTVGMAVAG"
+ misc_feature complement(1393692..1394537)
+ /locus_tag="SARI_01431"
+ /note="DMSO reductase anchor subunit [General function
+ prediction only]; Region: DmsC; COG3302"
+ /db_xref="CDD:225839"
+ gene complement(1394548..1395165)
+ /locus_tag="SARI_01432"
+ CDS complement(1394548..1395165)
+ /locus_tag="SARI_01432"
+ /inference="protein motif:HMMPfam:IPR001450"
+ /inference="protein motif:ScanRegExp:IPR001450"
+ /inference="similar to AA sequence:REFSEQ:NP_455453.1"
+ /note="'KEGG: ecp:ECP_0909 4.3e-115 anaerobic dimethyl
+ sulfoxide reductase, subunit B K07307;
+ COG: COG0437 Fe-S-cluster-containing hydrogenase
+ components 1;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570471.1"
+ /db_xref="GI:161503359"
+ /db_xref="InterPro:IPR001450"
+ /translation="MTTQYGFFIDSSRCTGCKTCELACKDYKDLTPDVSFRRIYEYAG
+ GDWQEDNGVWHQNVFAYYLSISCNHCEDPACTKVCPSGAMHKRDDGFVVVNEEVCIGC
+ RYCHMACPYSAPQYNAAKGHMTKCDGCYDRVAEGKKPICVESCPLRALDFGPIDELRK
+ KHGELAAVAPLPRAHFTKPNIVIKPNANSRPTGDTTGYLANPKEV"
+ misc_feature complement(1394677..1395156)
+ /locus_tag="SARI_01432"
+ /note="DMSO reductase, iron-sulfur subunit; Region:
+ DMSO_dmsB; TIGR02951"
+ /db_xref="CDD:131996"
+ gene complement(1395176..1397611)
+ /locus_tag="SARI_01433"
+ CDS complement(1395176..1397611)
+ /locus_tag="SARI_01433"
+ /inference="protein motif:HMMPfam:IPR006656"
+ /inference="protein motif:HMMPfam:IPR006657"
+ /inference="protein motif:HMMTigr:IPR011888"
+ /inference="protein motif:ScanRegExp:IPR006655"
+ /inference="protein motif:superfamily:IPR009010"
+ /note="'KEGG: stm:STM1498 0. putative dimethyl sulphoxide
+ reductase K07310;
+ COG: COG0243 Anaerobic dehydrogenases, typically
+ selenocysteine-containing;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="dimethyl sulfoxide reductase subunit A"
+ /protein_id="YP_001570472.2"
+ /db_xref="GI:448236228"
+ /db_xref="InterPro:IPR006655"
+ /db_xref="InterPro:IPR006656"
+ /db_xref="InterPro:IPR006657"
+ /db_xref="InterPro:IPR009010"
+ /db_xref="InterPro:IPR011888"
+ /translation="MKITTPEALMAASISRRSLVKTSAIGSLALASSAFTLPFSRIAH
+ AAAGLASGNVAEKAVWSSCTVNCGSRCLLRLHVKDDTVYWVESDTTGNDEYGNHQVRA
+ CLRGRSIRRRMNHPDRLKYPMKRVGKRGEGKFERISWDEALDTIGDNLKRILKDYGNE
+ AVHVLYGTGVDGGNITNSNVPYRLMNACGGYLSRYGSYSTAQISAAMSYMFGGNDGNS
+ PDDIANTKLVVMFGNNPAETRMSGGGVTYYVEQARERSNARMIVIDPRYNDTAAGRED
+ EWLPIRPGTDGALAAAIAWVLITEDLIDKPFLDKYCIGYDETTLPASAPRNAHYKAYI
+ LGQGEDGIAKTPQWAAQITSIPAEKIIQLAREIGSAKPAYICQGWGPQRHSNGEQTAR
+ AIAMLSVLTGNVGINGGNSGVREGTWDLGVEWFSMLENPVKTQISVFTWTDAIDHGAE
+ MTATRDGVRGKDKLDVPIKFLWCYASNTLINQHGDIAHTHEVLQDDSKCEMIVGIEHF
+ MTASAKYCDILLPDLMPTEQEDLISHESAGNMGYVILGQPATSPKFERKPIYWTLSEV
+ AKRLGPDVYQTFTEGRTQHEWVKYLHAKTKARNPEMPDYEEMKQTGIFKKKCPKEHYV
+ AFRAFREDPAANPLKTPSGKIEIYSERLATLADTWELKKDEIIHPLPAYTPGFDGWDD
+ PLRQRYPLQLTGFHYKARTHSSYGNIDVLQQACPQKIWINPIDAQARGIQHGDTVRVF
+ NQNGQMLIPAKVTPRILPGVTAIGQGAWLNADMFGDKIDRGGSINILTSHRPSPLAKG
+ NPSHSNLVQVEKA"
+ misc_feature complement(1395179..1397572)
+ /locus_tag="SARI_01433"
+ /note="anaerobic dimethyl sulfoxide reductase, A subunit,
+ DmsA/YnfE family; Region: dmsA_ynfE; TIGR02166"
+ /db_xref="CDD:233756"
+ misc_feature complement(1395575..1397434)
+ /locus_tag="SARI_01433"
+ /note="This CD (MopB_DmsA-EC) includes the DmsA enzyme of
+ the dmsABC operon encoding the anaerobic dimethylsulfoxide
+ reductase (DMSOR) of Escherichia coli and other related
+ DMSOR-like enzymes. Unlike other DMSOR-like enzymes, this
+ group has a predicted...; Region: MopB_DmsA-EC; cd02770"
+ /db_xref="CDD:239171"
+ misc_feature complement(order(1397303..1397305,1397399..1397401,
+ 1397411..1397413,1397423..1397425))
+ /locus_tag="SARI_01433"
+ /note="putative [Fe4-S4] binding site [ion binding]; other
+ site"
+ /db_xref="CDD:239171"
+ misc_feature complement(order(1395935..1395937,1396028..1396030,
+ 1396082..1396084,1396094..1396099,1396163..1396165,
+ 1396169..1396171,1396181..1396183,1396187..1396189,
+ 1396463..1396465,1396472..1396477,1396754..1396756,
+ 1396760..1396765,1396817..1396825,1396898..1396903,
+ 1396916..1396918,1397015..1397017))
+ /locus_tag="SARI_01433"
+ /note="putative molybdopterin cofactor binding site
+ [chemical binding]; other site"
+ /db_xref="CDD:239171"
+ misc_feature complement(1395182..1395550)
+ /locus_tag="SARI_01433"
+ /note="The MopB_CT_DmsA-EC CD includes the DmsA enzyme of
+ the dmsABC operon encoding the anaerobic dimethylsulfoxide
+ reductase (DMSOR) of Escherichia coli and other related
+ DMSOR-like enzymes. Unlike other DMSOR-like enzymes, this
+ group has a predicted...; Region: MopB_CT_DmsA-EC;
+ cd02794"
+ /db_xref="CDD:239195"
+ misc_feature complement(order(1395206..1395211,1395257..1395259,
+ 1395317..1395319,1395500..1395508,1395512..1395514,
+ 1395521..1395526,1395530..1395532))
+ /locus_tag="SARI_01433"
+ /note="putative molybdopterin cofactor binding site; other
+ site"
+ /db_xref="CDD:239195"
+ gene complement(1397710..1400148)
+ /locus_tag="SARI_01435"
+ CDS complement(1397710..1400148)
+ /locus_tag="SARI_01435"
+ /inference="protein motif:HMMPfam:IPR006656"
+ /inference="protein motif:HMMPfam:IPR006657"
+ /inference="protein motif:HMMPfam:IPR006963"
+ /inference="protein motif:HMMTigr:IPR011888"
+ /inference="protein motif:ScanRegExp:IPR006655"
+ /inference="protein motif:superfamily:IPR009010"
+ /note="'KEGG: stm:STM1499 0. putative dimethyl sulphoxide
+ reductase, chain A1 K07309;
+ COG: COG0243 Anaerobic dehydrogenases, typically
+ selenocysteine-containing;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570474.1"
+ /db_xref="GI:161503362"
+ /db_xref="InterPro:IPR006655"
+ /db_xref="InterPro:IPR006656"
+ /db_xref="InterPro:IPR006657"
+ /db_xref="InterPro:IPR006963"
+ /db_xref="InterPro:IPR009010"
+ /db_xref="InterPro:IPR011888"
+ /translation="MPGEKQQAGVSRRTLVKSAALGSLALAAGGVSLPFGMRTAAAAV
+ QQAMRDEKDKIVWGACSVNCGSRCALRLHVKDNEVWWVETDNTGDDVYGNHQVRACLR
+ GRSIRRRINHPDRLNYPMKRVGRRGEGKFERISWQEALDTISASLKKTVETYGNEAVY
+ IHYSSGIVGGNITRSSPAASPVKRLMNCYGGSLNQYGSYSTAQISCAMPYTYGSNDGN
+ STSDIENSKLVVMFGNNPAETRMSGGGITWFLEQARERSNARMIVIDPRYTDTAAGRE
+ DEWIPIRPGTDAALVAGIAWVLINENLVDQPFLDNYCIGYDEKTLPADAPPNGHYKAY
+ ILGQGDDGIAKTPQWTSHITGIPADRIIKLAREIGSVKPAYICQGWGPQRQANGEQTA
+ RAIAMLPILTGNVGIHGGNSGARESTYTITIERLPVLENPVKTAISCFSWTDAIARGP
+ EMTALRDGVRGKDKLDVPIKFLWNYAGNTLINQHSDINKTHEILQDEAKCEMIVVIDN
+ FMTSSAKYADILLPDLMTVEQEDIIPNDYAGNMGYLIFIQPATTPKFERKPIYWVLSE
+ IARRLGDDVYQRFTEGRTQAQWLQYLYAKMQARDPALPAYDELKKMGIYKRKDPNGHF
+ VAYKKFREDPQANPLKTPSGKIEIYSSKLAHIASTWELAEGDVISPLPIYTSTFEGWD
+ DPKRSTFPLQLFGFHYKSRTHSSYGNIDVLQAACRQEVWINPLDAQKRGIANGDRVRV
+ FNDRGEVRLPAKVTPRILPGVSAMGQGAWHDADMAGDKIDHGACINTLTTLRPSPLAK
+ GNPQHTNLVEIEKI"
+ misc_feature complement(1397713..1400037)
+ /locus_tag="SARI_01435"
+ /note="anaerobic dimethyl sulfoxide reductase, A subunit,
+ DmsA/YnfE family; Region: dmsA_ynfE; TIGR02166"
+ /db_xref="CDD:233756"
+ misc_feature complement(1398109..1399980)
+ /locus_tag="SARI_01435"
+ /note="This CD (MopB_DmsA-EC) includes the DmsA enzyme of
+ the dmsABC operon encoding the anaerobic dimethylsulfoxide
+ reductase (DMSOR) of Escherichia coli and other related
+ DMSOR-like enzymes. Unlike other DMSOR-like enzymes, this
+ group has a predicted...; Region: MopB_DmsA-EC; cd02770"
+ /db_xref="CDD:239171"
+ misc_feature complement(order(1399849..1399851,1399945..1399947,
+ 1399957..1399959,1399969..1399971))
+ /locus_tag="SARI_01435"
+ /note="putative [Fe4-S4] binding site [ion binding]; other
+ site"
+ /db_xref="CDD:239171"
+ misc_feature complement(order(1398469..1398471,1398562..1398564,
+ 1398616..1398618,1398628..1398633,1398697..1398699,
+ 1398703..1398705,1398715..1398717,1398721..1398723,
+ 1398997..1398999,1399006..1399011,1399288..1399290,
+ 1399294..1399299,1399351..1399359,1399432..1399437,
+ 1399450..1399452,1399549..1399551))
+ /locus_tag="SARI_01435"
+ /note="putative molybdopterin cofactor binding site
+ [chemical binding]; other site"
+ /db_xref="CDD:239171"
+ misc_feature complement(1397716..1398084)
+ /locus_tag="SARI_01435"
+ /note="The MopB_CT_DmsA-EC CD includes the DmsA enzyme of
+ the dmsABC operon encoding the anaerobic dimethylsulfoxide
+ reductase (DMSOR) of Escherichia coli and other related
+ DMSOR-like enzymes. Unlike other DMSOR-like enzymes, this
+ group has a predicted...; Region: MopB_CT_DmsA-EC;
+ cd02794"
+ /db_xref="CDD:239195"
+ misc_feature complement(order(1397740..1397745,1397791..1397793,
+ 1397851..1397853,1398034..1398042,1398046..1398048,
+ 1398055..1398060,1398064..1398066))
+ /locus_tag="SARI_01435"
+ /note="putative molybdopterin cofactor binding site; other
+ site"
+ /db_xref="CDD:239195"
+ gene complement(1400305..1400610)
+ /locus_tag="SARI_01436"
+ CDS complement(1400305..1400610)
+ /locus_tag="SARI_01436"
+ /inference="protein motif:HMMPfam:IPR010595"
+ /inference="similar to AA sequence:INSD:AAL20419.1"
+ /note="'COG: NOG12175 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570475.1"
+ /db_xref="GI:161503363"
+ /db_xref="InterPro:IPR010595"
+ /translation="MKIATAIAVLALISAPSLVMAAPGSCERVKSDIEQRIINNGVPA
+ DNFTLTIVPNDQADQPDSQVVGHCANDTHKILYTRTSSGNAPANTSPAQDGSSAEPQ"
+ misc_feature complement(1400374..1400535)
+ /locus_tag="SARI_01436"
+ /note="Protein of unknown function (DUF1161); Region:
+ DUF1161; pfam06649"
+ /db_xref="CDD:219121"
+ gene 1400682..1401428
+ /locus_tag="SARI_01437"
+ CDS 1400682..1401428
+ /locus_tag="SARI_01437"
+ /inference="protein motif:HMMPfam:IPR010646"
+ /inference="similar to AA sequence:INSD:AAV77299.1"
+ /note="'COG: NOG06202 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570476.1"
+ /db_xref="GI:161503364"
+ /db_xref="InterPro:IPR010646"
+ /translation="MIDKYLSILVKRVKKPILLTLLCMMPAGCDNPKSPESFTPEMAS
+ FSNEFDFDPLRGPVKDFSQTLMSENGEVAKQVTGTLSPEGCFDTLELHDLENNTGLAL
+ VLDANYYRDAQTLEKKVQLQGKCQLAALPSAGVTWETDDNGFVVSATGKEMKVEYRYD
+ AEGYPLGKTTINSQKTLSVTAKPSADPRKKLDYTAVSRVDDRQVGNVRQSCEYDAYAN
+ PVDCRLVIVDESVTPAVSHHYTIKNRIDYY"
+ misc_feature 1400718..1401425
+ /locus_tag="SARI_01437"
+ /note="Uncharacterized protein family (UPF0257); Region:
+ UPF0257; pfam06788"
+ /db_xref="CDD:148410"
+ gene complement(1401469..1402029)
+ /locus_tag="SARI_01438"
+ CDS complement(1401469..1402029)
+ /locus_tag="SARI_01438"
+ /inference="protein motif:HMMPfam:IPR000182"
+ /inference="similar to AA sequence:INSD:AAL20421.1"
+ /note="'KEGG: sec:SC1519 3.5e-97 speG; spermidine
+ N1-acetyltransferase K00657;
+ COG: COG1670 Acetyltransferases, including N-acetylases of
+ ribosomal proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="spermidine N1-acetyltransferase"
+ /protein_id="YP_001570477.1"
+ /db_xref="GI:161503365"
+ /db_xref="InterPro:IPR000182"
+ /translation="MTSDYNVRLRPLEREDLRFVHQLDNNASVMRYWFEEPYEAFVEL
+ SDLYDKHIHDQSERRFVVECDGKNAGLVELVEINHVHRRAEFQIIISPEYQGKGLASR
+ AAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRKLGFRVEGELIHEFFINGEYRNTI
+ RMCIFQQQYLDEHKTSGSTLLKPTAQ"
+ misc_feature complement(1401472..1402029)
+ /locus_tag="SARI_01438"
+ /note="spermidine N1-acetyltransferase; Provisional;
+ Region: PRK15130"
+ /db_xref="CDD:237916"
+ misc_feature complement(1401700..1401852)
+ /locus_tag="SARI_01438"
+ /note="N-Acyltransferase superfamily: Various enzymes that
+ characteristically catalyze the transfer of an acyl group
+ to a substrate; Region: NAT_SF; cd04301"
+ /db_xref="CDD:173926"
+ misc_feature complement(order(1401727..1401732,1401760..1401768))
+ /locus_tag="SARI_01438"
+ /note="Coenzyme A binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:173926"
+ misc_feature complement(1401604..>1401756)
+ /locus_tag="SARI_01438"
+ /note="N-Acyltransferase superfamily: Various enzymes that
+ characteristically catalyze the transfer of an acyl group
+ to a substrate; Region: NAT_SF; cl17182"
+ /db_xref="CDD:247736"
+ gene complement(1402065..1402448)
+ /locus_tag="SARI_01439"
+ CDS complement(1402065..1402448)
+ /locus_tag="SARI_01439"
+ /inference="protein motif:HMMPfam:IPR009700"
+ /inference="similar to AA sequence:INSD:AAL20422.1"
+ /note="'COG: NOG11441 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570478.1"
+ /db_xref="GI:161503366"
+ /db_xref="InterPro:IPR009700"
+ /translation="MFYHFFLLLRKDVVMNYTLSKRLCLTAMLTLAAVVYTTSAFAET
+ SKLVIESGDSAQSRQEAAMEKEQWNDTRSLRQKVNTRAEKEWDKADAAFDNRDKCEQS
+ ANINAYWEPNTLRCLDRRTGRVITP"
+ misc_feature complement(1402068..1402376)
+ /locus_tag="SARI_01439"
+ /note="hypothetical protein; Provisional; Region:
+ PRK13659"
+ /db_xref="CDD:184216"
+ gene 1402551..1402886
+ /locus_tag="SARI_01440"
+ CDS 1402551..1402886
+ /locus_tag="SARI_01440"
+ /inference="protein motif:BlastProDom:IPR003844"
+ /inference="protein motif:HMMPfam:IPR003844"
+ /inference="similar to AA sequence:REFSEQ:YP_216508.1"
+ /note="'COG: COG1742 Uncharacterized conserved protein;
+ Psort location: extracellular, including cell wall, score:
+ 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570479.1"
+ /db_xref="GI:161503367"
+ /db_xref="InterPro:IPR003844"
+ /translation="MTLMLKTTLLFFVTALCEIIGCFLPWLWIKRGASVWWLLPAVAS
+ LALFVWLLTLHPAASGRVYAAYGGVYVCTALLWLRVVDGVRLTVYDWCGALIALCGML
+ IIVVGWGRT"
+ misc_feature 1402593..1402880
+ /locus_tag="SARI_01440"
+ /note="hypothetical protein; Provisional; Region:
+ PRK02237"
+ /db_xref="CDD:235016"
+ gene 1403008..1404222
+ /locus_tag="SARI_01441"
+ CDS 1403008..1404222
+ /locus_tag="SARI_01441"
+ /inference="protein motif:HMMPanther:IPR001354"
+ /inference="protein motif:HMMPfam:IPR013341"
+ /inference="protein motif:HMMPfam:IPR013342"
+ /inference="protein motif:ScanRegExp:IPR001354"
+ /inference="similar to AA sequence:INSD:CAD01808.1"
+ /note="'KEGG: eci:UTI89_C1768 2.1e-218 rspA; starvation
+ sensing protein RspA K08323;
+ COG: COG4948 L-alanine-DL-glutamate epimerase and related
+ enzymes of enolase superfamily;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570480.1"
+ /db_xref="GI:161503368"
+ /db_xref="InterPro:IPR001354"
+ /db_xref="InterPro:IPR013341"
+ /db_xref="InterPro:IPR013342"
+ /translation="MKIVGAEVFVTCPGRNFVTLKITTEDGITGLGDATLNGRELSVA
+ SYLNDHLCPQLIGRDAHRIEDIWQFFYKGAYWRRGPVTMSAISAVDMALWDIKAKAAN
+ MPLYQLLGGASREGVMVYCHTTGHTIDDVLEDYARHKEQGFKAIRVQCGVPGMKTTYG
+ MAKGKGLAYEPATKGQWPEEQLWSTEKYLDFTPKLFDAVRNTFGFNEHLLHDMHHRLT
+ PIEAARFGKRIEDYRLFWMEDPTPAENQACFRLIRQHTVTPIAVGEVFNSIWDCKQLI
+ EEQLIDYIRTTITHAGGITGMRRIADFASLYQVRTGSHGPSDLSPVCMAAALHFDLWV
+ PNFGVQEFMGYSEQMLEVFPHNWTFEDGYMHPGDKPGLGIEFDEKLAAKYPYDPAYLP
+ VARLEDGTLWNW"
+ misc_feature 1403008..1404219
+ /locus_tag="SARI_01441"
+ /note="bifunctional D-altronate/D-mannonate dehydratase;
+ Provisional; Region: PRK15072"
+ /db_xref="CDD:237901"
+ misc_feature 1403011..1404219
+ /locus_tag="SARI_01441"
+ /note="The starvation sensing protein RpsA from E.coli and
+ its homologs are lactonizing enzymes whose putative
+ targets are homoserine lactone (HSL)-derivative. They are
+ part of the mandelate racemase (MR)-like subfamily of the
+ enolase superfamily. Enzymes of...; Region: rpsA; cd03322"
+ /db_xref="CDD:239438"
+ misc_feature order(1403365..1403367,1403446..1403448,1403452..1403454,
+ 1403641..1403643,1403713..1403715,1403719..1403721,
+ 1403797..1403799,1403866..1403868,1403947..1403949,
+ 1404028..1404030)
+ /locus_tag="SARI_01441"
+ /note="putative active site pocket [active]"
+ /db_xref="CDD:239438"
+ misc_feature order(1403641..1403643,1403719..1403721,1403797..1403799)
+ /locus_tag="SARI_01441"
+ /note="putative metal binding site [ion binding]; other
+ site"
+ /db_xref="CDD:239438"
+ gene 1404233..1405252
+ /locus_tag="SARI_01442"
+ CDS 1404233..1405252
+ /locus_tag="SARI_01442"
+ /inference="protein motif:HMMPanther:IPR002085"
+ /inference="protein motif:HMMPfam:IPR013149"
+ /inference="protein motif:HMMPfam:IPR013154"
+ /inference="protein motif:ScanRegExp:IPR002328"
+ /inference="protein motif:superfamily:IPR011032"
+ /inference="similar to AA sequence:INSD:AAL20425.1"
+ /note="'KEGG: stm:STM1506 4.0e-176 rspB; putative
+ dehydrogenase K08322;
+ COG: COG1063 Threonine dehydrogenase and related
+ Zn-dependent dehydrogenases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative dehydrogenase"
+ /protein_id="YP_001570481.1"
+ /db_xref="GI:161503369"
+ /db_xref="InterPro:IPR002085"
+ /db_xref="InterPro:IPR002328"
+ /db_xref="InterPro:IPR011032"
+ /db_xref="InterPro:IPR013149"
+ /db_xref="InterPro:IPR013154"
+ /translation="MKSIVIEKPNTLTIETRALPQPAPGEVRVNVKLAGICGSDSHIY
+ RGHNPFAKYPRVIGHEFFGVIDAVGDDINSARIGERVAVDPVISCGHCYPCSVGKPNV
+ CTSLVVLGVHRDGGFSEYAVVPARNAHRIPDSVADHHAVMVEPFTIAANVTGQVNPTE
+ QDVALIYGAGPMGLTTVQALKGVYQVNTVIVVDRIEERLAMAKQSGADWTLNNGQHSL
+ AEFLQEKALKPTLIVDAACHPAILQEAITLASPAARIVLMGFSSDPCEFIQQGITGKE
+ LTIYSSRLNANKFPVVIDWLNKGLIDPDKLITHTFDYQHVTDAIELFEKDQRQCCKVL
+ LSFAK"
+ misc_feature 1404233..1405249
+ /locus_tag="SARI_01442"
+ /note="putative oxidoreductase; Provisional; Region:
+ PRK10083"
+ /db_xref="CDD:182229"
+ misc_feature 1404233..1405243
+ /locus_tag="SARI_01442"
+ /note="Alcohol dehydrogenases of the MDR family; Region:
+ Zn_ADH7; cd08261"
+ /db_xref="CDD:176222"
+ misc_feature order(1404341..1404349,1404356..1404358,1404662..1404664,
+ 1404674..1404676,1404734..1404751,1404809..1404814,
+ 1404824..1404826,1404869..1404871,1404935..1404940,
+ 1404944..1404946,1405004..1405009,1405076..1405084)
+ /locus_tag="SARI_01442"
+ /note="putative NAD(P) binding site [chemical binding];
+ other site"
+ /db_xref="CDD:176222"
+ misc_feature order(1404341..1404343,1404407..1404412,1404662..1404664)
+ /locus_tag="SARI_01442"
+ /note="catalytic Zn binding site [ion binding]; other
+ site"
+ /db_xref="CDD:176222"
+ misc_feature order(1404497..1404499,1404506..1404508,1404515..1404517,
+ 1404539..1404541)
+ /locus_tag="SARI_01442"
+ /note="structural Zn binding site [ion binding]; other
+ site"
+ /db_xref="CDD:176222"
+ gene 1405306..1406685
+ /locus_tag="SARI_01443"
+ CDS 1405306..1406685
+ /locus_tag="SARI_01443"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="similar to AA sequence:INSD:AAO69071.1"
+ /note="'KEGG: cal:orf19.2425 6.2e-05 highly conserved
+ hypothetical protein K01804;
+ COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="membrane transporter"
+ /protein_id="YP_001570482.1"
+ /db_xref="GI:161503370"
+ /db_xref="InterPro:IPR011701"
+ /translation="MTQIKHERSTQDLVRAAVSGWLGTALEFMDFQLYSLGAALVFHE
+ IFFPEQSAAMALILAMGTYGAGYIARIVGAFVFGKMGDCIGRKKILFITITIMGICTT
+ LIGVLPTYAQIGIFAPVLLVTLRIIQGLGAGAEISGAGTMLAEYAPKGKRGIISSLVA
+ MGTNCGTLSATAIWAVMFFALDREQLVAWGWRIPFLASVVVMIFAIWLRMNLKESPVF
+ EKVSEGEKSPALTPASENTLGAMFTSKSFWLATGLRFGQAGNSGLIQTFLAGYLVQTL
+ LLNKSIPTDALMISSVIGFITIPLLGWLSDKYGRRLPYIILNFSAIILAWPMLSIVVD
+ KTYSPGVIMAALIIIHNFAVLGLFALENITMAEIFGSRNRFTRMAISKEAGGLVAVGF
+ GPVLAGIFCNMTDSWLPILIMLVLYSCIGLISALLMPEVRDRDLSLSEDAAEATAAEK
+ LRHSATQTS"
+ misc_feature 1405366..1406589
+ /locus_tag="SARI_01443"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature 1405372..1406571
+ /locus_tag="SARI_01443"
+ /note="metabolite-proton symporter; Region: 2A0106;
+ TIGR00883"
+ /db_xref="CDD:233168"
+ misc_feature order(1405396..1405398,1405405..1405413,1405417..1405422,
+ 1405471..1405473,1405501..1405506,1405513..1405515,
+ 1405525..1405530,1405534..1405539,1405699..1405704,
+ 1405711..1405716,1405723..1405728,1405735..1405737,
+ 1405771..1405776,1405783..1405788,1405804..1405806,
+ 1406077..1406079,1406086..1406091,1406098..1406103,
+ 1406110..1406112,1406152..1406154,1406164..1406166,
+ 1406176..1406178,1406185..1406187,1406197..1406199,
+ 1406356..1406358,1406365..1406370,1406377..1406379,
+ 1406389..1406394,1406401..1406403,1406434..1406439,
+ 1406446..1406451,1406461..1406466,1406473..1406475)
+ /locus_tag="SARI_01443"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene complement(1406656..1406853)
+ /locus_tag="SARI_01445"
+ CDS complement(1406656..1406853)
+ /locus_tag="SARI_01445"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570483.1"
+ /db_xref="GI:161503372"
+ /translation="MPIKACFAFYNLYILKAEQSQSHACPGAFGFTLIKQKWPDSMAE
+ TALAFRPYRRHDLTRLGCGVA"
+ gene 1406829..1408295
+ /locus_tag="SARI_01444"
+ CDS 1406829..1408295
+ /locus_tag="SARI_01444"
+ /inference="protein motif:HMMPfam:IPR013118"
+ /inference="protein motif:HMMPfam:IPR013131"
+ /inference="protein motif:ScanRegExp:IPR000669"
+ /inference="protein motif:superfamily:IPR008927"
+ /inference="similar to AA sequence:REFSEQ:YP_150604.1"
+ /note="'KEGG: spt:SPA1347 2.2e-255 ydfI; putative mannitol
+ dehydrogenase K00040;
+ COG: COG0246 Mannitol-1-phosphate/altronate
+ dehydrogenases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="D-mannonate oxidoreductase"
+ /protein_id="YP_001570484.2"
+ /db_xref="GI:448236229"
+ /db_xref="InterPro:IPR000669"
+ /db_xref="InterPro:IPR008927"
+ /db_xref="InterPro:IPR013118"
+ /db_xref="InterPro:IPR013131"
+ /translation="MQNRLLSAKATLPDYDRTALAARMVHLGFGAFHRAHQGVYTDIL
+ AAEQHSDWGYYEVNLIGGEQQIADLKQQDNLYTVAEMSAEAWTARVVGVVKAALHVQV
+ DGLERVLAAMCEPQIAIVSLTITEKGYCHSPATGQLLLEHPMIAADLQNPHQPLTAPG
+ IIVEALARRKAAGLPAFTVMSCDNMPENGHVTRNVVTAYARSLDAELAIWIEQNVTFP
+ STMVDRIVPAVTPETLDKMAQLTGVYDPAGVACEPFRQWVIEDKFVAGRPQWENAGAT
+ LVADVIPFEEMKLRMLNGSHSFLAYLGYLAGYQHINDCMADDNYRLTAQALMLREQAP
+ TLKVQGVDLQRYADRLIARYRNPALRHRTWQIAMDGSQKLPQRMLDSVRWHLANHSDF
+ DLLALGVAGWMRYVGGVDEQGKAIDVSDPLLPVIQRAVANSEEGASRVEALLGIADIF
+ GNDLPQAARFTQKVQEAYDRLLTYGAKASVAKYAERLK"
+ misc_feature 1406847..1408277
+ /locus_tag="SARI_01444"
+ /note="Mannitol-1-phosphate/altronate dehydrogenases
+ [Carbohydrate transport and metabolism]; Region: MtlD;
+ COG0246"
+ /db_xref="CDD:223324"
+ misc_feature 1406895..1407383
+ /locus_tag="SARI_01444"
+ /note="Mannitol dehydrogenase Rossmann domain; Region:
+ Mannitol_dh; pfam01232"
+ /db_xref="CDD:144722"
+ misc_feature 1407465..1408208
+ /locus_tag="SARI_01444"
+ /note="Mannitol dehydrogenase C-terminal domain; Region:
+ Mannitol_dh_C; pfam08125"
+ /db_xref="CDD:149275"
+ gene complement(1408362..1408628)
+ /locus_tag="SARI_01446"
+ CDS complement(1408362..1408628)
+ /locus_tag="SARI_01446"
+ /inference="similar to AA sequence:REFSEQ:YP_216513.1"
+ /note="'COG: NOG13886 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570485.1"
+ /db_xref="GI:161503373"
+ /translation="MSPVMRGNPRALAVSLKGENTMMTYDRNRNAITTGSRVMISGTG
+ HTGIIKAIESEGLDAGQIRRGKTVIVEGCEGKFAPVELIRLGMN"
+ misc_feature complement(1408371..1408565)
+ /locus_tag="SARI_01446"
+ /note="putative selenium-binding protein YdfZ; Region:
+ YdfZ_fam; TIGR03318"
+ /db_xref="CDD:132361"
+ gene complement(1408745..1409431)
+ /locus_tag="SARI_01447"
+ CDS complement(1408745..1409431)
+ /locus_tag="SARI_01447"
+ /inference="protein motif:Gene3D:IPR000524"
+ /inference="protein motif:HMMPfam:IPR000524"
+ /inference="protein motif:HMMPfam:IPR011711"
+ /inference="protein motif:HMMSmart:IPR000524"
+ /inference="similar to AA sequence:REFSEQ:YP_150602.1"
+ /note="'KEGG: msm:MSMEG_3400 3.2e-08 glutamyl-tRNA(Gln)
+ amidotransferase subunit A K01957;
+ COG: COG1802 Transcriptional regulators;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570486.1"
+ /db_xref="GI:161503374"
+ /db_xref="InterPro:IPR000524"
+ /db_xref="InterPro:IPR011711"
+ /translation="MTVETQLNPTQPVNQQIYRILRRDIVHCLIPPGTPLSEKEVSTR
+ FSVSRQPVREAFIKLAENGLIQIRPQRGSYVNKISLSQVQNGCFVRQAIECAVVRRAA
+ AMITDEQCYQLAQNLHLQHIAIERKQIDDFFQLDDDFHQKLAQIADCQLAWDTIENIK
+ ATIDRVRYMSLDHVSPPEMLLRQHHDIFSALEKRDGNAVESAMTQHLQEISESVQLIR
+ QENSGWFSED"
+ misc_feature complement(1408802..1409431)
+ /locus_tag="SARI_01447"
+ /note="Transcriptional regulators [Transcription]; Region:
+ GntR; COG1802"
+ /db_xref="CDD:224715"
+ misc_feature complement(1409204..1409389)
+ /locus_tag="SARI_01447"
+ /note="Winged helix-turn-helix (WHTH) DNA-binding domain
+ of the GntR family of transcriptional regulators; Region:
+ WHTH_GntR; cd07377"
+ /db_xref="CDD:153418"
+ misc_feature complement(order(1409213..1409224,1409228..1409233,
+ 1409261..1409263,1409270..1409275,1409279..1409293,
+ 1409315..1409320))
+ /locus_tag="SARI_01447"
+ /note="DNA-binding site [nucleotide binding]; DNA binding
+ site"
+ /db_xref="CDD:153418"
+ misc_feature complement(1408808..1409167)
+ /locus_tag="SARI_01447"
+ /note="FCD domain; Region: FCD; pfam07729"
+ /db_xref="CDD:219539"
+ gene complement(1409560..1410306)
+ /locus_tag="SARI_01448"
+ CDS complement(1409560..1410306)
+ /locus_tag="SARI_01448"
+ /inference="protein motif:HMMPanther:IPR002347"
+ /inference="protein motif:HMMPfam:IPR002198"
+ /inference="protein motif:ScanRegExp:IPR002198"
+ /inference="similar to AA sequence:REFSEQ:NP_455969.1"
+ /note="'NADP(+)-dependent; catalyzes the formation of
+ 2-aminomalonate-semialdehyde from L-serine; can also use
+ 3-hydroxybutyrate, 3-hydroxy-isobutyrate, D-threonine,
+ L-allo-threonine,D-serine'"
+ /codon_start=1
+ /transl_table=11
+ /product="3-hydroxy acid dehydrogenase"
+ /protein_id="YP_001570487.1"
+ /db_xref="GI:161503375"
+ /db_xref="InterPro:IPR002198"
+ /db_xref="InterPro:IPR002347"
+ /translation="MIVLVTGATAGFGECIARRFVENGHKVIATGRRHERLQALKDEL
+ GDNVLTAQLDVRNRAAIEEMMASLPAQWRDIDVLVNNAGLALGLEPAHKASVEDWETM
+ IDTNNKGLIYMTRAVLPGMVERNRGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLN
+ LRTDLHGTAVRVTDIEPGLVGGTEFSSVRFKGDDEKAGKTYENTTALTPEDITEAVWW
+ VATLPAHVNINTVEMMPVTQSFAGLSVHRG"
+ misc_feature complement(1409563..1410306)
+ /locus_tag="SARI_01448"
+ /note="malonic semialdehyde reductase; Provisional;
+ Region: PRK10538"
+ /db_xref="CDD:182531"
+ misc_feature complement(1409569..1410306)
+ /locus_tag="SARI_01448"
+ /note="classical (c) SDR, subgroup 5; Region: SDR_c5;
+ cd05346"
+ /db_xref="CDD:187604"
+ misc_feature complement(order(1409755..1409760,1409767..1409778,
+ 1409854..1409856,1409866..1409868,1409905..1409913,
+ 1409992..1409994,1410058..1410066,1410142..1410150,
+ 1410208..1410216,1410271..1410282,1410286..1410288))
+ /locus_tag="SARI_01448"
+ /note="putative NAD(P) binding site [chemical binding];
+ other site"
+ /db_xref="CDD:187604"
+ misc_feature complement(order(1409569..1409571,1409806..1409811,
+ 1409815..1409820,1409824..1409829,1409836..1409841,
+ 1409848..1409853,1409857..1409865,1409869..1409901,
+ 1409941..1409943,1409953..1409955,1409962..1409964,
+ 1409971..1409976,1409983..1409988,1409995..1410000,
+ 1410007..1410012,1410016..1410021,1410034..1410039,
+ 1410133..1410135))
+ /locus_tag="SARI_01448"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:187604"
+ misc_feature complement(order(1409569..1409622,1409626..1409628,
+ 1409632..1409634,1409653..1409655,1409674..1409676,
+ 1409815..1409823,1409827..1409832,1409839..1409841,
+ 1409848..1409853,1409857..1409862,1409872..1409883,
+ 1409887..1409898,1409962..1409964,1409971..1409973,
+ 1409983..1409985,1409995..1409997,1410007..1410012,
+ 1410016..1410021,1410034..1410036,1410133..1410135))
+ /locus_tag="SARI_01448"
+ /note="homotetramer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:187604"
+ misc_feature complement(order(1409854..1409856,1409866..1409868,
+ 1409905..1409907,1409989..1409991))
+ /locus_tag="SARI_01448"
+ /note="active site"
+ /db_xref="CDD:187604"
+ gene 1410444..1412486
+ /locus_tag="SARI_01449"
+ CDS 1410444..1412486
+ /locus_tag="SARI_01449"
+ /inference="protein motif:HMMPfam:IPR001567"
+ /inference="protein motif:ScanRegExp:IPR006025"
+ /note="'KEGG: stt:t1433 0. dcp; dipeptidyl
+ carboxypeptidase II K01284;
+ COG: COG0339 Zn-dependent oligopeptidases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="dipeptidyl carboxypeptidase II"
+ /protein_id="YP_001570488.1"
+ /db_xref="GI:161503376"
+ /db_xref="InterPro:IPR001567"
+ /db_xref="InterPro:IPR006025"
+ /translation="MSTNPFLDQSRLPYQAPRFDRIKDCHYRPAFDEGVRQKRVEIEA
+ IVNHPAAPDFTNTLLALEQSGALLSRVTSVFFAMAAAHTNDELQRLDEVFSAGLAALS
+ TDIYLNGALFARVDAVWQQRHSMGLDDESLRLVDVIHQRFVLAGAQLAEEDKARLKVL
+ NTESATLMSQFNQRLLAANKAGGLAVEDAHCLEGLSPEEIAVAAEAAREKGLEERWFI
+ PLLNTTQQPALAALRDRQTRKNLFTASWTRAEKGDAHDTRAIIQRLAEIRRCQAKLLG
+ FPNYAAWKIADQMAKTPQAALNFMRDLVPPARQRVLNEQAEIQNVIDSEQGGYSVQPW
+ DWMFYAEQVRREKYALDEAQLKPYFALNTVLQEGVFWTANQLFGITFVERFDIPVYHP
+ DVRVWEIFDSDGVGMALFYGDFFARDSKSGGAWMGNFVEQSTLNGTRPVIYNVCNYQK
+ PVDGQPALLLWDDVITLFHEFGHTLHGLFAVQRYATLSGTNTPRDFVEFPSQINEHWA
+ SHPRVFERYARHAGSGEKMPADLQEKMRQASLFNKGYDMTELLGAALLDMRWHMLEVS
+ VTELSVADFEQQALAAEHLALPAVPPRYRSSYFAHIFGGGYAAGYYAYLWTQMLADDG
+ YQWFVEQGGLTRENGQRFREAILSRGNSADLESLYSAWRGHEPHIGAMLQYRGLDH"
+ misc_feature 1410444..1412483
+ /locus_tag="SARI_01449"
+ /note="dipeptidyl carboxypeptidase II; Provisional;
+ Region: PRK10280"
+ /db_xref="CDD:182353"
+ misc_feature 1410519..1412477
+ /locus_tag="SARI_01449"
+ /note="Peptidase family M3 dipeptidyl carboxypeptidase
+ (DCP); Region: M3A_DCP; cd06456"
+ /db_xref="CDD:188995"
+ misc_feature order(1411713..1411721,1411848..1411853,1411860..1411862,
+ 1411935..1411937,1411944..1411946,1412091..1412093,
+ 1412220..1412225,1412241..1412246,1412256..1412264,
+ 1412274..1412276,1412283..1412285)
+ /locus_tag="SARI_01449"
+ /note="active site"
+ /db_xref="CDD:188995"
+ misc_feature order(1411848..1411850,1411860..1411862,1411935..1411937)
+ /locus_tag="SARI_01449"
+ /note="Zn binding site [ion binding]; other site"
+ /db_xref="CDD:188995"
+ gene 1412635..1412781
+ /locus_tag="SARI_01450"
+ CDS 1412635..1412781
+ /locus_tag="SARI_01450"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570489.1"
+ /db_xref="GI:161503377"
+ /translation="MIAINLLPLRFRDFRKYIFARWRYYVNKVEMNLTLRAGRLNLEL
+ YHMI"
+ gene 1412778..1413011
+ /locus_tag="SARI_01451"
+ CDS 1412778..1413011
+ /locus_tag="SARI_01451"
+ /inference="similar to AA sequence:REFSEQ:YP_216517.1"
+ /note="'COG: COG3729 General stress protein;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570490.1"
+ /db_xref="GI:161503378"
+ /translation="MRRHIIFKTQQHHEDYIMAEHRGGSGNFAEDKEKASEAGRKGGQ
+ HSGGNFKNDPQRASEAGKKGGQNSHSGGRKSDK"
+ misc_feature 1412808..1412990
+ /locus_tag="SARI_01451"
+ /note="General stress protein [General function prediction
+ only]; Region: GsiB; COG3729"
+ /db_xref="CDD:226252"
+ gene complement(1413131..1413658)
+ /locus_tag="SARI_01452"
+ CDS complement(1413131..1413658)
+ /locus_tag="SARI_01452"
+ /inference="protein motif:HMMPfam:IPR008136"
+ /inference="protein motif:HMMPIR:IPR012244"
+ /inference="protein motif:HMMTigr:IPR008136"
+ /inference="similar to AA sequence:REFSEQ:NP_460474.1"
+ /note="'COG: COG1546 Uncharacterized protein (competence-
+ and mitomycin-induced);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="competence damage-inducible protein A"
+ /protein_id="YP_001570491.1"
+ /db_xref="GI:161503379"
+ /db_xref="InterPro:IPR008136"
+ /db_xref="InterPro:IPR012244"
+ /translation="MRLEQHDIVTLDKAESVDSLTKKLGDLLVNQKLRLTTAESCTGG
+ KLASALCAAEDTPSFYGVGYVTFTDEAKAKILRVQRHSLAEHTAVSEAVVTEMAQGAK
+ DQAAVDISIAISGYGGPEGGEDGTPAGTVWFAWNINNTTFTTQQHFTGDCQEVLDKSV
+ RFALAELLFLLTKKA"
+ misc_feature complement(1413134..1413643)
+ /locus_tag="SARI_01452"
+ /note="hypothetical protein; Validated; Region: PRK03657"
+ /db_xref="CDD:235149"
+ gene 1414086..1414478
+ /locus_tag="SARI_01453"
+ CDS 1414086..1414478
+ /locus_tag="SARI_01453"
+ /inference="protein motif:HMMPfam:IPR005220"
+ /inference="protein motif:HMMTigr:IPR005220"
+ /inference="similar to AA sequence:INSD:AAV77285.1"
+ /note="'COG: COG3111 Uncharacterized conserved protein;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570492.1"
+ /db_xref="GI:161503380"
+ /db_xref="InterPro:IPR005220"
+ /translation="MKLQVAAFLSFLIMPYALADDQGGLKKDVAPPPPHAIEDGYRGT
+ DDAEKMTIEQAKTLHDGATVSLRGNLIDHKGDDRYVFRDKSGEINVIIPSAVFDGREV
+ QPDQMININGSLDKKAKEAVVRVSRLQK"
+ misc_feature 1414086..1414475
+ /locus_tag="SARI_01453"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10053"
+ /db_xref="CDD:182212"
+ unsure 1414488..1414494
+ /note="Sequence derived from one plasmid subclone"
+ unsure 1414626..1414892
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(1415195..1415646)
+ /locus_tag="SARI_01454"
+ /note="Pseudogene compared to gi|16764861|ref|NP_460476.1|
+ putative transport protein [Salmonella typhimurium LT2]"
+ gene complement(1415711..1415956)
+ /locus_tag="SARI_01455"
+ CDS complement(1415711..1415956)
+ /locus_tag="SARI_01455"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570493.1"
+ /db_xref="GI:161503381"
+ /translation="MDFWGISLYQSWRNGRVNITGDIGYNASDGISANLIEKTTFAGQ
+ IGVKLLKGDMRWGLGYSVNTSSHNNDQMINATWQLSF"
+ unsure 1415938..1416102
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(1416073..1416462)
+ /locus_tag="SARI_01456"
+ CDS complement(1416073..1416462)
+ /locus_tag="SARI_01456"
+ /inference="protein motif:FPrintScan:IPR000005"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR000005"
+ /inference="protein motif:HMMSmart:IPR000005"
+ /inference="protein motif:ScanRegExp:IPR000005"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:INSD:AAF61916.1"
+ /note="'transcriptional activator of genes involved in the
+ multiple antibiotic resistance (Mar) phenotype; also
+ activates sodA, zwf and micF'"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional activator MarA"
+ /protein_id="YP_001570494.1"
+ /db_xref="GI:161503382"
+ /db_xref="InterPro:IPR000005"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /translation="MTMSRRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHL
+ QRMFKKETGHSLGQYIRSRKMTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYF
+ DVPPHKYRITNMHGESRYMLPLNHGNC"
+ misc_feature complement(1416079..1416456)
+ /locus_tag="SARI_01456"
+ /note="DNA-binding transcriptional activator MarA;
+ Provisional; Region: PRK11511"
+ /db_xref="CDD:236920"
+ misc_feature complement(1416280..1416405)
+ /locus_tag="SARI_01456"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ misc_feature complement(1416133..1416243)
+ /locus_tag="SARI_01456"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ gene complement(1416477..1416911)
+ /locus_tag="SARI_01457"
+ CDS complement(1416477..1416911)
+ /locus_tag="SARI_01457"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000835"
+ /inference="protein motif:HMMSmart:IPR000835"
+ /inference="protein motif:ScanRegExp:IPR000835"
+ /inference="similar to AA sequence:INSD:AAV77280.1"
+ /note="Repressor of the marRAB operon which is involved in
+ the activation of both antibiotic resistance and oxidative
+ stress genes"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional repressor MarR"
+ /protein_id="YP_001570495.1"
+ /db_xref="GI:161503383"
+ /db_xref="InterPro:IPR000835"
+ /db_xref="InterPro:IPR011991"
+ /translation="MKSTSDLFNEIIPLGRLIYMVNQKKDRLLNDYLSPLDITASQFK
+ VLCSIRCAGCITPVELKKVLSVDLGALTRMLDRLLCKGWIERLPNPNDKRGVLVKLTP
+ EGAAICEQCHQQPRQDLHQELTKNLTADEVATLEYLLKKILP"
+ misc_feature complement(1416480..1416911)
+ /locus_tag="SARI_01457"
+ /note="DNA-binding transcriptional repressor MarR;
+ Provisional; Region: PRK11512"
+ /db_xref="CDD:183170"
+ misc_feature complement(1416516..1416818)
+ /locus_tag="SARI_01457"
+ /note="helix_turn_helix multiple antibiotic resistance
+ protein; Region: HTH_MARR; smart00347"
+ /db_xref="CDD:197670"
+ gene 1417170..1417835
+ /locus_tag="SARI_01458"
+ CDS 1417170..1417835
+ /locus_tag="SARI_01458"
+ /inference="protein motif:HMMPfam:IPR002771"
+ /inference="protein motif:HMMTigr:IPR002771"
+ /inference="similar to AA sequence:INSD:AAX65445.1"
+ /note="'protein involved in resistance to different drugs
+ (tetracycline, chloramphenicol, beta-lactams, and
+ quinolones); part of the multiple antibiotic resistance
+ (mar) locus, which is composed by the genes marC and
+ marRAB; unknown function'"
+ /codon_start=1
+ /transl_table=11
+ /product="multiple drug resistance protein MarC"
+ /protein_id="YP_001570496.1"
+ /db_xref="GI:161503384"
+ /db_xref="InterPro:IPR002771"
+ /translation="MMDLFKAIGLGLVVLLPLANPLTTVALFLGLAGNMNSTERNRQS
+ YMASVYVFAIMMVAYYAGQLVMNTFGISIPGLRIAGGLIVAFIGCRMLFPQQKAHESP
+ EAKSKSEELADEPTANIAFVPLAMPSTAGPGTIAMIISSASTVRHGGEFPDWVITVAP
+ PIIFLAVAVILWGCLRSSGAIMRLVGKGGIEAISRLMGFLLVCMGVQFIINGVLEIIK
+ TYH"
+ misc_feature 1417170..1417832
+ /locus_tag="SARI_01458"
+ /note="inner membrane protein; Provisional; Region:
+ PRK10995"
+ /db_xref="CDD:236814"
+ gene complement(1417881..1419071)
+ /locus_tag="SARI_01459"
+ CDS complement(1417881..1419071)
+ /locus_tag="SARI_01459"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="similar to AA sequence:INSD:CAD01791.1"
+ /note="'KEGG: dre:30298 1.2e-06 jak2b; Janus kinase 2b
+ K04447;
+ COG: COG2814 Arabinose efflux permease;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="sugar efflux transporter"
+ /protein_id="YP_001570497.1"
+ /db_xref="GI:161503385"
+ /db_xref="InterPro:IPR011701"
+ /translation="MTINPVSRKVAWLRVVTLAIAAFIFNTTEFVPVGLLSDIAESFH
+ MQTAQVGIMLTIYAWVVAVMSLPFMLLTSQIERRKLLICLFVLFIASHVLSFLAWNFT
+ VLVISRIGIAFTHAIFWSITASLAIRLAPAGKRAQALSLIATGTALAMVLGLPIGRVV
+ GQYFGWRTTFFAIGMGALITLICLIKLLPKLPSEHSGSLKSLPLLFRRPALMSLYLLT
+ AVVVTAHYTAYSYIEPFVQNVAGLSANFATVLLLILGGAGIIGSLVFGKLGNQHASLL
+ VSIAISLLVVCLLLLLPAADSEAHLALLSIFWGIAIMVIGLGMQVKVLALAPDATDVA
+ MALFSGIFNIGIGAGALAGNQVSLHWSMSTIGYIGAVPACAALVWAVLIFRKWPVTLE
+ EQPR"
+ misc_feature complement(1417890..1419059)
+ /locus_tag="SARI_01459"
+ /note="putative arabinose transporter; Provisional;
+ Region: PRK03545"
+ /db_xref="CDD:179591"
+ misc_feature complement(<1418325..1419029)
+ /locus_tag="SARI_01459"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature complement(order(1418331..1418333,1418373..1418375,
+ 1418382..1418387,1418394..1418399,1418406..1418408,
+ 1418622..1418624,1418640..1418645,1418652..1418657,
+ 1418691..1418693,1418700..1418705,1418712..1418717,
+ 1418724..1418729,1418865..1418870,1418874..1418879,
+ 1418889..1418891,1418898..1418903,1418910..1418912,
+ 1418961..1418966,1418970..1418978,1418985..1418987))
+ /locus_tag="SARI_01459"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene complement(1419186..1420058)
+ /locus_tag="SARI_01460"
+ CDS complement(1419186..1420058)
+ /locus_tag="SARI_01460"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="protein motif:HMMPfam:IPR005119"
+ /inference="similar to AA sequence:REFSEQ:NP_460483.1"
+ /note="'KEGG: shn:Shewana3_3435 2.3e-11 transcriptional
+ regulator, LysR family K06022;
+ COG: COG0583 Transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570498.1"
+ /db_xref="GI:161503386"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR005119"
+ /translation="MDLTQLEMFNAVALTGSITQAAAKVHRVPSNLTTRIRQLEADLG
+ VSLFIRENQRLRLSPAGHNFLRYSQQILALVDEARMVVAGEEPQGLFSLGALESTAAV
+ RIPALLAGFNQRYPKIQFALTTGSSGAMLEGVLEGKLNAAFIDGPLMHPGLEGMPVYP
+ EEMMIVAPHGHPVVSRASDVNGCNIYAFRANCSYRRHFESWFHADGAMPGTIHEMESY
+ HGMLACVIAGAGIALMPASMLNSMPGHYQVEAWPLAEKWRWLTTWLIWRRGAMTRQLE
+ AFIELLNAQLSSTD"
+ misc_feature complement(1419192..1420058)
+ /locus_tag="SARI_01460"
+ /note="Transcriptional regulator [Transcription]; Region:
+ LysR; COG0583"
+ /db_xref="CDD:223656"
+ misc_feature complement(1419873..1420052)
+ /locus_tag="SARI_01460"
+ /note="Bacterial regulatory helix-turn-helix protein, lysR
+ family; Region: HTH_1; pfam00126"
+ /db_xref="CDD:215735"
+ misc_feature complement(1419213..1419791)
+ /locus_tag="SARI_01460"
+ /note="The C-terminal substrate binding domain of
+ LysR-type transcriptional regulators, YofA and SoxR,
+ contains the type 2 periplasmic binding fold; Region:
+ PBP2_YofA_SoxR_like; cd08442"
+ /db_xref="CDD:176133"
+ misc_feature complement(order(1419378..1419383,1419387..1419392,
+ 1419408..1419425,1419687..1419707,1419711..1419713,
+ 1419723..1419725,1419732..1419737,1419741..1419746))
+ /locus_tag="SARI_01460"
+ /note="putative dimerization interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:176133"
+ gene 1420161..1421549
+ /locus_tag="SARI_01461"
+ CDS 1420161..1421549
+ /locus_tag="SARI_01461"
+ /inference="protein motif:HMMPfam:IPR002086"
+ /inference="protein motif:HMMPIR:IPR012303"
+ /inference="protein motif:ScanRegExp:IPR002086"
+ /inference="similar to AA sequence:REFSEQ:NP_460484.1"
+ /note="in Escherichia coli this enzyme appears to be an
+ NAD+/NADP+-dependent succinate semialdehyde dehydrogenase"
+ /codon_start=1
+ /transl_table=11
+ /product="putative succinate semialdehyde dehydrogenase"
+ /protein_id="YP_001570499.1"
+ /db_xref="GI:161503387"
+ /db_xref="InterPro:IPR002086"
+ /db_xref="InterPro:IPR012303"
+ /translation="MTMMTPTPALSINPATGQTLATMPWANAQEIEHALNLAAKGFKQ
+ WKMAPVTQRAQTLRDIGQALRTHAEEMAQCITREMGKPIKQARAEVTKSAALCDWYAE
+ HGPAMLNPEPTRVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLK
+ HAPNVTGCAQMIARIFTEAGTPAGVYGWLNASNEGVSQMINDPRIAAVTVTGSVRAGA
+ AIGAQAGAALKKCVLELGGSDPFIVLNDADLDLAVKAAVAGRYQNTGQVCAAAKRFIV
+ EEGIAQAFTERFVAAASALTMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLL
+ LGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFG
+ LSATIFTANDTLAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHE
+ FCNVQTVWKNRV"
+ misc_feature 1420161..1421546
+ /locus_tag="SARI_01461"
+ /note="putative succinate semialdehyde dehydrogenase;
+ Provisional; Region: PRK13968"
+ /db_xref="CDD:184426"
+ misc_feature 1420251..1421534
+ /locus_tag="SARI_01461"
+ /note="Mycobacterium tuberculosis succinate-semialdehyde
+ dehydrogenase 1-like; Region: ALDH_SSADH1_GabD1; cd07100"
+ /db_xref="CDD:143418"
+ misc_feature order(1420557..1420571,1420593..1420595,1420638..1420640,
+ 1420644..1420649,1420788..1420799,1420806..1420808,
+ 1420815..1420820,1420860..1420868,1420962..1420964,
+ 1421253..1421255,1421259..1421261,1421337..1421339,
+ 1421451..1421453)
+ /locus_tag="SARI_01461"
+ /note="NAD(P) binding site [chemical binding]; other site"
+ /db_xref="CDD:143418"
+ misc_feature order(1420569..1420571,1420860..1420862,1420953..1420955,
+ 1420962..1420964)
+ /locus_tag="SARI_01461"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:143418"
+ gene 1421634..1422548
+ /locus_tag="SARI_01462"
+ CDS 1421634..1422548
+ /locus_tag="SARI_01462"
+ /inference="protein motif:HMMPanther:IPR007043"
+ /inference="protein motif:HMMPfam:IPR007043"
+ /inference="protein motif:superfamily:IPR012338"
+ /inference="similar to AA sequence:SwissProt:Q8ZPI2"
+ /note="catalyzes the formation of glutamate from
+ glutamine"
+ /codon_start=1
+ /transl_table=11
+ /product="glutaminase"
+ /protein_id="YP_001570500.2"
+ /db_xref="GI:448236230"
+ /db_xref="InterPro:IPR007043"
+ /db_xref="InterPro:IPR012338"
+ /translation="MDNAILETILQRVRPLIGQGKVADYIPALASVEGSKLGIAICTV
+ DGQHYQAGDAHERFSIQSISKVLSLVVAMRHYPEEEIWQRVGKDPSGSPFNSLVQLEM
+ EQGIPRNPFINAGALVVCDMLQGRLSAPRQRMLEVVRALCGVSDITYDATVARSEFEH
+ SARNAAIAWLMKSFGNFHHDVPTVLQNYFHYCALKMSCMELARTFVFLANQGEAFHLD
+ EPVVTPMQARQINALMATNGMYQNAGEFAWRVGLPAKSGVGGGIVAIVPHEMAIAVWS
+ PELDPAGNSLAGIAALEQLTQTLGRSVY"
+ misc_feature 1421634..1422545
+ /locus_tag="SARI_01462"
+ /note="Glutaminase [Amino acid transport and metabolism];
+ Region: GlsA; COG2066"
+ /db_xref="CDD:224977"
+ misc_feature 1421634..1422545
+ /locus_tag="SARI_01462"
+ /note="glutaminase; Provisional; Region: PRK00971"
+ /db_xref="CDD:234880"
+ gene 1422548..1422907
+ /locus_tag="SARI_01463"
+ CDS 1422548..1422907
+ /locus_tag="SARI_01463"
+ /inference="similar to AA sequence:INSD:AAL20445.1"
+ /note="'COG: NOG13916 non supervised orthologous group;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570501.1"
+ /db_xref="GI:161503389"
+ /translation="MNALEPLFARLARSTFRSRFRLGVKERQYCWDKGAEVIDRHAAD
+ FIAQRLAPAYPAKDGKQTPMRGHPVFIAQHATATCCRGCLAKWHHIPQGETLSEAQQQ
+ YIVSVIHYWLVRQMNQR"
+ misc_feature 1422557..1422889
+ /locus_tag="SARI_01463"
+ /note="Domain of unknown function (DUF4186); Region:
+ DUF4186; pfam13811"
+ /db_xref="CDD:205984"
+ gene 1423445..1426831
+ /locus_tag="SARI_01464"
+ CDS 1423445..1426831
+ /locus_tag="SARI_01464"
+ /inference="similar to AA sequence:REFSEQ:NP_309588.1"
+ /note="'COG: NOG26587 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570502.1"
+ /db_xref="GI:161503390"
+ /translation="MMPITLENISARPSRQTLKIKGIGTRDTMQYLSALGGTYQDAIF
+ NEQTSNLPDEYIRLDEMARDEKQYNLNIYEFFFEPTPELICEEIKTTLDFHYLNSPTF
+ RRLVNYKVDYIINNDIDTNKCEVKISPNYSYENAEGGRGYLSMPFDINGFPIAPDFYN
+ CENKITSEKLLLDLFLKHILHGDLNSNNEVTCIFSNVIYKEIDPVAIAHTLLCFSPVK
+ VNSEHELFNIDSITALPKSTEQIIYEGNEIQKRILSSFHGSNNFQPGAVHKIERNIKS
+ IAVTSLLLSSRVTAMPDSAEIKDKYTKPDGNHPLYKEQQRYPRALPEDHPAQQPERDY
+ VREIFYNHGGLANQVLLANQVLSVLSSVREDLYVKGYHELLVFSQTGKWPQNGREIAS
+ EYMFEKIKNYIEKGTTITLHNGRLITFYQFIIDRLECQYEMFEVLARDMVVHPETKES
+ GHYLHHLKRKFITPHTPSFEKLYGRNVISRVLEDINLYRKTTRKSKLLNHRQMRALFK
+ IAQLVIHHLSRNGGDMKLLEHNIRKQNYVIILTILQKSMNLKNSGSVKDRDIKIISRN
+ IMVNNKLTRHIEEVIRNNGNGIQLRLIKLAIHKQLDWVEKHYKSEEHIKKHMEECDIL
+ GTFDMNKMVKSAVTSFIHEAQDISASIWLTTEQKHNQQVQALERFKSKVSSMNDGQQF
+ VYGFNKVIQEGLGGLIELSFDIDDSRHHRTESSLSPASREGLHLLGTIWNIATSIVPG
+ FNALAGTSSILNRAIVEKSTDVCGYIQDVIRIGMEAAPVAEAKFTERASNAKYTGLRF
+ LENKIERGVIRSPIQKGSNYKVIESIENIDFIYQKSTNKILELNPEGNDGLYRATGFN
+ KETHGYYKQSGEGFYRKQKSFSPLSTEAPNTIKYGEREIVLSKEPGSETYQGTFSDTG
+ KNVGMTFYRTSDGKFYQASGLKGGGPIRHVDKPYSELREGDVGYDEELLDISDDSPLL
+ EDMLPSLSEELYPTSEENVQSIYKKIQSGDTAAGETEVVLCRGTTGPQAENIVKLKTA
+ GGVEGADPNVLPVSEETARLQVRNGRVVPEYTTDLSVADRFSREHYLIIVKVKAKYIT
+ RGSVSESGWVMPYTAPVEPVGIIDRTYGHAENIGQANASK"
+ gene 1427491..1427847
+ /locus_tag="SARI_01465"
+ CDS 1427491..1427847
+ /locus_tag="SARI_01465"
+ /inference="protein motif:HMMPfam:IPR001702"
+ /inference="similar to AA sequence:INSD:AAL20449.1"
+ /note="'COG: COG3203 Outer membrane protein (porin);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570503.1"
+ /db_xref="GI:161503391"
+ /db_xref="InterPro:IPR001702"
+ /translation="MGMGMGVSLREAYTSSKRTLDQITQDKYDNGDRAEAWTGDANNV
+ YLAANYTRTYDMTYMGDTLDSLLLIYSIVISGRFWRPFLLTILLRFPEYAFCYCHLSV
+ PFLNDKRDSWGWMFET"
+ misc_feature <1427497..>1427673
+ /locus_tag="SARI_01465"
+ /note="Porin superfamily. These outer membrane channels
+ share a beta-barrel structure that differ in strand and
+ shear number. Classical (gram-negative ) porins are
+ non-specific channels for small hydrophillic molecules and
+ form 16 beta-stranded barrels (16,20)...; Region:
+ OM_channels; cl17244"
+ /db_xref="CDD:247798"
+ gene complement(1427744..1428085)
+ /locus_tag="SARI_01466"
+ CDS complement(1427744..1428085)
+ /locus_tag="SARI_01466"
+ /inference="protein motif:BlastProDom:IPR000688"
+ /inference="protein motif:HMMPfam:IPR000688"
+ /inference="protein motif:HMMPIR:IPR000688"
+ /inference="protein motif:HMMTigr:IPR000688"
+ /inference="similar to AA sequence:INSD:AAL20450.1"
+ /note="'COG: COG0375 Zn finger protein HypA/HybF (possibly
+ regulating hydrogenase expression);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570504.1"
+ /db_xref="GI:161503392"
+ /db_xref="InterPro:IPR000688"
+ /translation="MHELALAQNIIELLEEQAVNHQFNQVKQVWLEIGVMACVEVPAL
+ HFGLDVAARHTIAENARFHITIAPAQGWCLSCNQPFTSQTSTPSCPACHSGKVQIDDS
+ SRMRIREIEVE"
+ misc_feature complement(1427747..1428085)
+ /locus_tag="SARI_01466"
+ /note="Zn finger protein HypA/HybF (possibly regulating
+ hydrogenase expression) [General function prediction
+ only]; Region: HybF; COG0375"
+ /db_xref="CDD:223452"
+ misc_feature complement(1427747..1428085)
+ /locus_tag="SARI_01466"
+ /note="Hydrogenase expression/synthesis hypA family;
+ Region: HypA; cl17671"
+ /db_xref="CDD:248225"
+ gene complement(1428098..1428976)
+ /locus_tag="SARI_01467"
+ CDS complement(1428098..1428976)
+ /locus_tag="SARI_01467"
+ /inference="similar to AA sequence:INSD:AAL20451.1"
+ /note="'COG: NOG36839 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570505.1"
+ /db_xref="GI:161503393"
+ /translation="MTLYSHPLRIIWQEPPVGRLLQGATPVYAKTLISRLFTLCAQAH
+ SAAASLLLFPQEEPDMQAAQRELARETLRRALTDWLPIFSHRQATVEEWALLRRGDLS
+ SLASTIFFADDPHSWLAAGVQGWEAWFLQGHSDAARWLAALQSIVTPTLPIASSPDQA
+ LITHGPLDVSPLAIEYPLLSACCLSGKNTALRLLARCITLARSLSALPTLRWNRFDDG
+ EWKIAVVETARGWLVHQARLATSGNILDYRIISPTTRHAQSDGVIACELAAIPASLWS
+ RQLQVIDPCVAINIIE"
+ misc_feature complement(1428215..>1428313)
+ /locus_tag="SARI_01467"
+ /note="Coenzyme F420-reducing hydrogenase, alpha subunit
+ [Energy production and conversion]; Region: FrhA; COG3259"
+ /db_xref="CDD:225798"
+ gene complement(1428973..1430034)
+ /locus_tag="SARI_01468"
+ CDS complement(1428973..1430034)
+ /locus_tag="SARI_01468"
+ /inference="protein motif:BlastProDom:IPR004039"
+ /inference="protein motif:HMMPfam:IPR004039"
+ /inference="protein motif:HMMPfam:IPR006894"
+ /inference="similar to AA sequence:REFSEQ:YP_150580.1"
+ /note="'KEGG: eci:UTI89_C1045 6.2e-36 hyaF; hydrogenase-1
+ operon protein HyaF K03618;
+ COG: COG1773 Rubredoxin;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570506.1"
+ /db_xref="GI:161503394"
+ /db_xref="InterPro:IPR004039"
+ /db_xref="InterPro:IPR006894"
+ /translation="MNHSRTIPIVNIAGPGSQPEEEDFNFLPIPAGINLPLTPVLPEQ
+ ALPGELHVARQVLTTLISKMDSPVETLSFPLTYKLNASEQQNSGLLDQLLGEGEISAR
+ VLLPKGKEQRIQETVFAGVWRVREYNADQQRVTDEIIVGPIPESIWRTHPQPPITPEL
+ PPQSTELMNGAFIAHEIAERVKQPVKEPHIINLTLLPVNDADREYLDRFLGEGCSAIF
+ SRGYGKCRIVSTHFPGVWRVNYFNDMNTLLQDMIEIADIPEIAVAGIDDIEDACAGLK
+ NTLEWLKEYPVTENEPVVRMECKVCWWVYDPVLGDDVWQIPPGVPFSQLPDYWCCPVC
+ ETSKSGFMVIDEGNDSCKD"
+ misc_feature complement(<1429600..>1429770)
+ /locus_tag="SARI_01468"
+ /note="HupH hydrogenase expression protein, C-terminal
+ conserved region; Region: HupH_C; pfam04809"
+ /db_xref="CDD:147123"
+ misc_feature complement(1429186..1429536)
+ /locus_tag="SARI_01468"
+ /note="HupH hydrogenase expression protein, C-terminal
+ conserved region; Region: HupH_C; pfam04809"
+ /db_xref="CDD:147123"
+ misc_feature complement(1428994..1429155)
+ /locus_tag="SARI_01468"
+ /note="Rubredoxin [Energy production and conversion];
+ Region: COG1773"
+ /db_xref="CDD:224687"
+ misc_feature complement(1429003..1429152)
+ /locus_tag="SARI_01468"
+ /note="Rubredoxin; nonheme iron binding domains containing
+ a [Fe(SCys)4] center. Rubredoxins are small nonheme iron
+ proteins. The iron atom is coordinated by four cysteine
+ residues (Fe(S-Cys)4), but iron can also be replaced by
+ cobalt, nickel or zinc. They are...; Region: rubredoxin;
+ cd00730"
+ /db_xref="CDD:238372"
+ misc_feature complement(order(1429033..1429035,1429042..1429044,
+ 1429132..1429134,1429141..1429143))
+ /locus_tag="SARI_01468"
+ /note="iron binding site [ion binding]; other site"
+ /db_xref="CDD:238372"
+ gene complement(1430052..1430462)
+ /locus_tag="SARI_01469"
+ CDS complement(1430052..1430462)
+ /locus_tag="SARI_01469"
+ /inference="protein motif:Gene3D:IPR012335"
+ /inference="protein motif:HMMPfam:IPR010893"
+ /inference="protein motif:superfamily:IPR012336"
+ /inference="similar to AA sequence:INSD:AAO69094.1"
+ /note="'COG: NOG22061 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570507.1"
+ /db_xref="GI:161503395"
+ /db_xref="InterPro:IPR010893"
+ /db_xref="InterPro:IPR012335"
+ /db_xref="InterPro:IPR012336"
+ /translation="MTISPKNPVCPLANKGFLITDAQTLPSLINAHPTLLVLLQSDPN
+ KHPEVADSWIIIPEILKQFPATSYTAAFADSEQSELIAREYRILKYPALLFFRQSRFV
+ GSLAGLYSWQEYSTRVAALLTTPGYRQDIPVITQ"
+ misc_feature complement(1430112..1430438)
+ /locus_tag="SARI_01469"
+ /note="HyaE family; HyaE is also called HupG and HoxO.
+ They are proteins serving a critical role in the assembly
+ of multimeric [NiFe] hydrogenases, the enzymes that
+ catalyze the oxidation of molecular hydrogen to enable
+ microorganisms to utilize hydrogen as the...; Region:
+ HyaE; cd02965"
+ /db_xref="CDD:239263"
+ gene complement(1430459..1430758)
+ /locus_tag="SARI_01470"
+ CDS complement(1430459..1430758)
+ /locus_tag="SARI_01470"
+ /inference="protein motif:BlastProDom:IPR001109"
+ /inference="protein motif:HMMPfam:IPR001109"
+ /inference="protein motif:HMMPIR:IPR001109"
+ /inference="protein motif:HMMTigr:IPR001109"
+ /inference="protein motif:ScanRegExp:IPR001109"
+ /inference="similar to AA sequence:INSD:AAX65458.1"
+ /note="'COG: NOG17080 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570508.1"
+ /db_xref="GI:161503396"
+ /db_xref="InterPro:IPR001109"
+ /translation="MCIGIPVQVISPGQWFAQCRDRYGDLIDVDIRLVAPPLAGAWLL
+ TFGGAARREMDETEALEVLAALDSLEQAMFTQSDPLAGFADLLSRTPELPEHLKK"
+ misc_feature complement(1430540..1430758)
+ /locus_tag="SARI_01470"
+ /note="HupF/HypC family; Region: HupF_HypC; cl00394"
+ /db_xref="CDD:241837"
+ gene complement(1430758..1431366)
+ /locus_tag="SARI_01471"
+ CDS complement(1430758..1431366)
+ /locus_tag="SARI_01471"
+ /inference="protein motif:Gene3D:IPR000671"
+ /inference="protein motif:HMMPfam:IPR000671"
+ /inference="protein motif:HMMPIR:IPR000671"
+ /inference="protein motif:HMMTigr:IPR000671"
+ /inference="protein motif:HMMTigr:IPR004419"
+ /inference="protein motif:HMMTigr:IPR006227"
+ /inference="similar to AA sequence:REFSEQ:NP_460496.1"
+ /note="'KEGG: sec:SC1553 1.1e-102 hupD; putative
+ hydrogenase maturation protease K03605;
+ COG: COG0680 Ni,Fe-hydrogenase maturation factor;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570509.1"
+ /db_xref="GI:161503397"
+ /db_xref="InterPro:IPR000671"
+ /db_xref="InterPro:IPR004419"
+ /db_xref="InterPro:IPR006227"
+ /translation="MAEVTILGLGNLLWADEGFGVRAAEKLFEQYADNEKVDVVDGGT
+ QGLALLPWLQQTEKLLIMDAIDFGMAPGSLAMFRDEQVPAYLTAKKLSLHQTSFSEVL
+ ALLQLTGCQLSEIVLIGVQPECLDDYGGSLTPQVKAQLMPAVYLAQEVLAQWGITASS
+ AALPTERLNHYSLCMERYEDERPDAQSACRIGDIRVLQREKS"
+ misc_feature complement(1430914..1431363)
+ /locus_tag="SARI_01471"
+ /note="coenzyme F420-reducing hydrogenase delta subunit
+ (putative coenzyme F420 hydrogenase processing subunit);
+ Region: frhD; TIGR00130"
+ /db_xref="CDD:161726"
+ misc_feature complement(1430914..1431357)
+ /locus_tag="SARI_01471"
+ /note="Endopeptidases belonging to membrane-bound
+ hydrogenases group. These hydrogenases transfer electrons
+ from H2 to a cytochrome that is bound to a
+ membrane-located complex coupling electron transfer to
+ transmembrane proton translocation. Endopeptidase HybD...;
+ Region: H2MP_MemB-H2up; cd06062"
+ /db_xref="CDD:99873"
+ misc_feature complement(order(1431238..1431246,1431292..1431294,
+ 1431334..1431336))
+ /locus_tag="SARI_01471"
+ /note="putative substrate-binding site; other site"
+ /db_xref="CDD:99873"
+ misc_feature complement(order(1431085..1431087,1431178..1431180,
+ 1431316..1431318))
+ /locus_tag="SARI_01471"
+ /note="nickel binding site [ion binding]; other site"
+ /db_xref="CDD:99873"
+ gene complement(1431372..1432100)
+ /locus_tag="SARI_01472"
+ CDS complement(1431372..1432100)
+ /locus_tag="SARI_01472"
+ /inference="protein motif:BlastProDom:IPR000516"
+ /inference="protein motif:FPrintScan:IPR000516"
+ /inference="protein motif:HMMPfam:IPR011577"
+ /inference="protein motif:HMMTigr:IPR000516"
+ /inference="protein motif:ScanRegExp:IPR000516"
+ /inference="similar to AA sequence:INSD:"
+ /note="'KEGG: eci:UTI89_C1042 1.7e-65 hyaC; probable
+ Ni/Fe-hydrogenase 1 B-type cytochrome subunit K03620;
+ COG: COG1969 Ni,Fe-hydrogenase I cytochrome b subunit;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570510.1"
+ /db_xref="GI:161503398"
+ /db_xref="InterPro:IPR000516"
+ /db_xref="InterPro:IPR011577"
+ /translation="MEGSWSGFRYDDDDSEVSMHLKEITSQGYYIYEAPVRLWHWITA
+ LSIVVLAVTGYFIGRPLPSIQGEATFLFWMGWIRLIHFTTAYIFSVALLFRIYWACVG
+ NEYAREMFLVPFWRRAWRKGIISEIRWYFFLEKEAHRYYGHNPVAGLAVMFYFWMSVL
+ MVCSGFALYGEGLGTDSWAYQWFGWMIRLTGNDSLALHFWHRLGMWFIIAFVIAHVYT
+ AIREDIMSRQSVISVMISGWRWFR"
+ misc_feature complement(1431375..1432046)
+ /locus_tag="SARI_01472"
+ /note="Ni,Fe-hydrogenase I cytochrome b subunit [Energy
+ production and conversion]; Region: HyaC; COG1969"
+ /db_xref="CDD:224880"
+ gene complement(1432066..1433868)
+ /locus_tag="SARI_01473"
+ CDS complement(1432066..1433868)
+ /locus_tag="SARI_01473"
+ /inference="protein motif:HMMPfam:IPR001501"
+ /inference="protein motif:ScanRegExp:IPR001501"
+ /note="'KEGG: stm:STM1538 0. hydrogenase large chain
+ K06281;
+ COG: COG0374 Ni,Fe-hydrogenase I large subunit;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570511.1"
+ /db_xref="GI:161503399"
+ /db_xref="InterPro:IPR001501"
+ /translation="MSYPYQTQGFTLDNSGRRIVVDPVTRIEGHMRCEVNIDNNNVIT
+ NAVSTGTMWRGLEVILKGRDPRDAWAFVERICGVCTGTHALTSIRAVENALGIAIPDN
+ ANCIRNMMQATLHVHDHLVHFYHLHALDWVDVVAALKADPHQTSAIAQSLSAWPLSSP
+ GYFRDLQNRLKQFIESGQLGPFRNGYWGHPAMKLPPEANLLAVAHYLEALDFQKEIVK
+ IHTVFGGKNPHPNWLVGGVPCAINLDETGAVGAVNMERLNLVRSIIQKARQFCEQVYL
+ PDILLIASYYKDWAKIGGGLSSMNLLAYGEFPDNPNDYSASNLLLPRGAIINGRFDEI
+ HPVDLTAPDEIQEFVTHSWYTYGNGNNDKGLHPWDGLTEPQLVMGEHYKGTKTFIEQL
+ DESAKYSWIKSPRWKGYAMEVGPLARCLIGYHQNKPEFKEPVDQLLSVLKLPKEALFS
+ TLGRTAARALESVWAGNTLQYFFDRLMRNLKSGDTATANVTLWEPDTWPTFAKGVGFS
+ EAPRGALGHWIKIENQRIDSYQCVVPTTWNAGPRDDKGQIGAYEAALMGTKLAVPDQP
+ LEILRTLHSFDPCLACSTHVIDNHGGELVRVQVR"
+ misc_feature complement(1432069..1433868)
+ /locus_tag="SARI_01473"
+ /note="hydrogenase 1 large subunit; Provisional; Region:
+ PRK10170"
+ /db_xref="CDD:182281"
+ misc_feature complement(1432069..1433823)
+ /locus_tag="SARI_01473"
+ /note="Ni,Fe-hydrogenase I large subunit [Energy
+ production and conversion]; Region: HyaB; COG0374"
+ /db_xref="CDD:223451"
+ gene complement(1433871..1434863)
+ /locus_tag="SARI_01474"
+ CDS complement(1433871..1434863)
+ /locus_tag="SARI_01474"
+ /inference="protein motif:HMMPfam:IPR006137"
+ /inference="protein motif:HMMPfam:IPR013634"
+ /inference="protein motif:HMMTigr:IPR001821"
+ /inference="similar to AA sequence:REFSEQ:NP_460499.1"
+ /note="'KEGG: stm:STM1539 7.5e-182 hydrogenase small chain
+ K06282;
+ COG: COG1740 Ni,Fe-hydrogenase I small subunit;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570512.1"
+ /db_xref="GI:161503400"
+ /db_xref="InterPro:IPR001821"
+ /db_xref="InterPro:IPR006137"
+ /db_xref="InterPro:IPR013634"
+ /translation="MIPQIAYALENKPRTPVIWLHGLECTCCTESFIRSAHPLAKDAI
+ LSLISLDYDDTIMAAAGQQAEQALADVMREYKGNYIVAVEGNAPLNEDGMFCILAGEP
+ FLEKLKRVSADAKAIIAWGACASWGCVQAARPNPTKATPVHKLITDKPVIKVPGCPPI
+ PEVMSAVITYMLAFDRIPPLDRLGRPKMFYGQRIHDKCYRRAHFDAGQFVEAWDDEGA
+ RKGYCLYKMGCKGPTTYNACSTVRWNDGVSFPIQSGHGCLGCSEDGFWDYGSFYSRAT
+ GIPQTGIEATADKIGLGVAGVAGAAAIAHATVSAIKHTRNKNSTSSENAPEEKK"
+ misc_feature complement(1433997..1434863)
+ /locus_tag="SARI_01474"
+ /note="Ni,Fe-hydrogenase I small subunit [Energy
+ production and conversion]; Region: HyaA; COG1740"
+ /db_xref="CDD:224654"
+ misc_feature complement(1434354..1434791)
+ /locus_tag="SARI_01474"
+ /note="NADH ubiquinone oxidoreductase, 20 Kd subunit;
+ Region: Oxidored_q6; pfam01058"
+ /db_xref="CDD:216271"
+ gene complement(1435308..1436804)
+ /locus_tag="SARI_01475"
+ CDS complement(1435308..1436804)
+ /locus_tag="SARI_01475"
+ /inference="protein motif:HMMPIR:IPR009199"
+ /inference="similar to AA sequence:INSD:CAD01772.1"
+ /note="'COG: COG4287 PhoPQ-activated pathogenicity-related
+ protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570513.1"
+ /db_xref="GI:161503401"
+ /db_xref="InterPro:IPR009199"
+ /translation="MKKIYLVIILVLFISTNVYTQLHNNIFFCRNSPECDLSHVLPDY
+ REHISDTPLKYTLISTEPLAQVELRHYELLSQHWSPDDMVTPAQWRHNVDIYIPETAK
+ QRHALVVVNNGVNYEEGVQINSKPVDFTQETLASIARDTNTIVISVSDIPNQYLTFQD
+ DKKPLKEDESVSRSWALFMEAPEQRKLMPLNIPMVSSLSQAIRLAKEELTRWNIHSFI
+ VTGISKRGWTAWLSAIADPDVEAIVPFAIDLLDIDASLEHIYQSYGGNWPITFYPYYQ
+ QGIDEKIKTHSFSQLRQIIDPLRYLNTVYQPRLAIPKYIINASGDDFFVPDNSRFYYS
+ KLPGVKSLRIVPNTSHYSIKQITEESLVTFINRFQDKKTLPQVLGIIQHNLLTVYFSE
+ EPIKVVRWTATNPNARDFRYACGIRYHPLTIDIPTNNRVNITLNEPVTGWEATYIEAT
+ FDDGYVATTQVYITPDDKYAQTAPPSVNTACQTLPGRGLGENDIADGA"
+ misc_feature complement(1435341..1436804)
+ /locus_tag="SARI_01475"
+ /note="PhoPQ-activated pathogenicity-related protein
+ [General function prediction only]; Region: PqaA; COG4287"
+ /db_xref="CDD:226737"
+ misc_feature complement(1435752..>1436216)
+ /locus_tag="SARI_01475"
+ /note="Alpha/beta hydrolase family; Region: Abhydrolase_6;
+ pfam12697"
+ /db_xref="CDD:221720"
+ gene 1437303..1437761
+ /locus_tag="SARI_01476"
+ CDS 1437303..1437761
+ /locus_tag="SARI_01476"
+ /inference="similar to AA sequence:INSD:BAB91597.1"
+ /note="'COG: COG3109 Activator of osmoprotectant
+ transporter ProP;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570514.1"
+ /db_xref="GI:161503402"
+ /translation="MFSSEARVVPGQDSAILVSPRLMPSIFSFSQTEPEFINASLEKV
+ KALFPLLRAEEGGFRPIKIGITRDVTDFIAQNPDAGLTLPEWQGAARIITCRWKYLER
+ ISVSGALRYGIDGLPAGVVSEHEARHARAFLTSKLPSKNKNNGANDKSAT"
+ misc_feature 1437405..1437695
+ /locus_tag="SARI_01476"
+ /note="ProQ/FINO family; Region: ProQ; pfam04352"
+ /db_xref="CDD:218040"
+ gene complement(1437968..1438147)
+ /locus_tag="SARI_01477"
+ gene 1438410..1439303
+ /locus_tag="SARI_01478"
+ CDS 1438410..1439303
+ /locus_tag="SARI_01478"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="similar to AA sequence:INSD:BAA03385.1"
+ /note="'KEGG: shn:Shewana3_3435 1.3e-05 transcriptional
+ regulator, LysR family K06022;
+ COG: COG0583 Transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570516.1"
+ /db_xref="GI:161503404"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR011991"
+ /translation="MDFLINKKLKIFITLMETGSFSIATSVLYITRTPLSRVISDLER
+ ELKQRLFIRKNGTLIPTEFAQTIYRKVKSHYIFLHALEQEIGPTGKTKQLEIIFDEIY
+ PESLKNLIISALNISGQKTNIMGRAVNSQIIEELCQTNNCIVISARHYFHRESLVCRT
+ SVEGGGMLFIPKKFFLCGKPDINRLAGTPVLLHEGAKNFNLDTIYHFFEQTLGITNPA
+ FSFDNVDLFSSLYRLQQGLAMLLIPVRVCRALGLSTEHALHIKGVALCTSLYYPTKKR
+ ETPDYRKAIKLIQQELQQSTF"
+ misc_feature 1438410..1439300
+ /locus_tag="SARI_01478"
+ /note="transcriptional regulator SpvR; Provisional;
+ Region: PRK15243"
+ /db_xref="CDD:185155"
+ misc_feature 1438428..1438604
+ /locus_tag="SARI_01478"
+ /note="Bacterial regulatory helix-turn-helix protein, lysR
+ family; Region: HTH_1; pfam00126"
+ /db_xref="CDD:215735"
+ misc_feature 1438794..1439246
+ /locus_tag="SARI_01478"
+ /note="The substrate binding domain of LysR-type
+ transcriptional regulators (LTTRs), a member of the type 2
+ periplasmic binding fold protein superfamily; Region:
+ PBP2_LTTR_substrate; cl11398"
+ /db_xref="CDD:245600"
+ gene 1439278..1439641
+ /locus_tag="SARI_01479"
+ /pseudogene="unknown"
+ gene 1439815..1440708
+ /locus_tag="SARI_01480"
+ CDS 1439815..1440708
+ /locus_tag="SARI_01480"
+ /inference="protein motif:BlastProDom:IPR003518"
+ /inference="protein motif:FPrintScan:IPR003518"
+ /inference="protein motif:HMMPfam:IPR003518"
+ /inference="similar to AA sequence:INSD:AAD02677.1"
+ /note="'COG: NOG27507 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570518.1"
+ /db_xref="GI:161503406"
+ /db_xref="InterPro:IPR003518"
+ /translation="MNMNQTTSPALSQVETAIRVPAGNFAKYNYYSVFDIVRQTRKQF
+ INANMSWPCSREGKAKDLAMGQAQYIRCLFRENQLTRRVRGAMQQTPDNGTNLSSSAV
+ GGIQGQAERRPDLATLMVDNDAINQQIPTLQLVNDILENNIATSLPSEQSVDETLAQT
+ RYPTLLPYHFPHDQVELSLLNTDVSLEDIISESSTDWPWFLSNLLTGDNSNYAMELAS
+ RLSPEQQTLPTEPDNSTTTDLTSFYQTNLGLKTADYTPFEALNTSARQLAITVPQVEQ
+ LIAGTLRASRQFSFPRYQSSE"
+ misc_feature 1439815..1440705
+ /locus_tag="SARI_01480"
+ /note="virulence protein SpvA; Provisional; Region:
+ PRK15212"
+ /db_xref="CDD:185134"
+ gene 1440862..1442649
+ /locus_tag="SARI_01481"
+ CDS 1440862..1442649
+ /locus_tag="SARI_01481"
+ /inference="protein motif:HMMPfam:IPR003284"
+ /note="'COG: NOG06259 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570519.1"
+ /db_xref="GI:161503407"
+ /db_xref="InterPro:IPR003284"
+ /translation="MLILNGFSSATLALITTPFLPKGGKALSQSGPDGLASITLPLPI
+ SAECGFAPALALHYSSSGGNGPFGVGWSCATMSIARRTSHGVPQYNDSDEFLGPDGEV
+ LVQTLSTGDAPNPVTCFAYGDVSFPQSYTVTRYQPRTEGSFYRLEYWVGNSNGDDFWL
+ LHDSNGILHLLGKTAAARLSDPQAASHTAKWLVEESVTPAGEHIYYSYLAENGDNVDL
+ SGNEAGRDRSAMRYLSKVQYGNATPAADLYLWTSATPAAQWLFTLVFDYGERGVDPLV
+ PPAFTAQNSWLARQDSFSLYDYGFEIRLHRLCRQVLMFHHFPDELGEADTLVSRLLLE
+ YDENPVLTQLSATRTLAYEGDGYRRAPVNNMMPPPPPPPPPPPMIGGNSSRPKSKWAI
+ VEESKQIQALRYYSAQGYSVINKYLRGDDYPEIQAKETLLSRDYLSTNEPSDEEFKNA
+ MSVYINDIVEGLSSLPETDHRVVYRGLKLDKPALSDVLKEYTTVGNIIIDKAFMSTSP
+ DKAWINDTILNIYLEKGHKGRILGDVAHFKGEAEMLFPPNTKLKIESIVNCGSQDFAS
+ QLSKLRLSDDATADTNRIKRIINMRVLNS"
+ misc_feature 1440862..1442646
+ /locus_tag="SARI_01481"
+ /note="virulence protein SpvB; Provisional; Region:
+ PRK15244"
+ /db_xref="CDD:185156"
+ misc_feature 1440940..1441812
+ /locus_tag="SARI_01481"
+ /note="Salmonella virulence plasmid 65kDa B protein;
+ Region: SpvB; pfam03534"
+ /db_xref="CDD:217601"
+ misc_feature 1442047..1442532
+ /locus_tag="SARI_01481"
+ /note="VIP2; A family of actin-ADP-ribosylating toxin. A
+ member of the Bacillus-prodiced vegetative insecticidal
+ proteins (VIPs) possesses high specificity against the
+ major insect pest, corn rootworms, and belongs to a classs
+ of binary toxins and regulators of...; Region: VIP2;
+ cl00173"
+ /db_xref="CDD:241658"
+ misc_feature order(1442074..1442076,1442113..1442115,1442284..1442286,
+ 1442374..1442382,1442485..1442487,1442512..1442514)
+ /locus_tag="SARI_01481"
+ /note="active site"
+ /db_xref="CDD:238144"
+ misc_feature 1442113..1442115
+ /locus_tag="SARI_01481"
+ /note="conformational flexibility of ligand binding
+ pocket; other site"
+ /db_xref="CDD:238144"
+ misc_feature order(1442470..1442472,1442479..1442481,1442485..1442487)
+ /locus_tag="SARI_01481"
+ /note="ADP-ribosylating toxin turn-turn motif; other site"
+ /db_xref="CDD:238144"
+ gene 1442931..1443656
+ /locus_tag="SARI_01482"
+ CDS 1442931..1443656
+ /locus_tag="SARI_01482"
+ /inference="protein motif:BlastProDom:IPR003519"
+ /inference="protein motif:HMMPfam:IPR003519"
+ /inference="similar to AA sequence:INSD:AAL23529.1"
+ /note="'COG: NOG06167 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570520.1"
+ /db_xref="GI:161503408"
+ /db_xref="InterPro:IPR003519"
+ /translation="MPINMPNLKLNISPLNIVAAYDGAEIPSTNKHLKNNFNSLHNQM
+ RKMPVSHFKEALDAPDYSGMRQSGFFAMSQGFQLNNHGYDVFIHARRESPQSQGEFAG
+ DKFHISVLRDMVPQAFQALSGLLFSEDSPVDKWKVTDMEKVVQQARVSLGAQFTLYIK
+ PDQENSQYSASFLHKTRQFIECLESRLSENGVISGQCPESDVHPENWKYLSYRNELRS
+ GRDGGEMQRQALREEPFYRLMTE"
+ misc_feature 1442934..1443653
+ /locus_tag="SARI_01482"
+ /note="Salmonella virulence-associated 28kDa protein;
+ Region: VRP3; pfam03536"
+ /db_xref="CDD:202678"
+ gene 1444096..1445247
+ /locus_tag="SARI_01483"
+ CDS 1444096..1445247
+ /locus_tag="SARI_01483"
+ /inference="similar to AA sequence:INSD:AAX39449.1"
+ /note="'COG: COG3179 Predicted chitinase;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570521.1"
+ /db_xref="GI:161503409"
+ /translation="MAIKLLTHVTLSTPAGIYGANRRPCHARKKVVQISGKPAYILLA
+ YTGRVGEDTPVYLTWQADAPLFEKGEQGMVAGSRKTKISGIVTLAKVPGVDAAGTALS
+ DNKDAAYYQIYQEGGWLPAVSVQKISQYALGELGFATLDKAPASFDLIDGINQPNNVV
+ KGILEQLYKAAQEETRTPHALNKYNYKRLLELIDSNQDGYYSEQEYLQANHNVSYRDH
+ LYRVIAKHASEWYYGKDDQLWKTYLEVFLDKMTWMKAASENGVALGAEPWHMHPIAFL
+ NAIKKGKAKITREMLRRIWPDPRQYDPVLNEPMAVSAETHGDFWEDDMDYSEAVSYEG
+ INTKAGVQAKTDEKTCENCPPEGKVMPMVRRCSRWSMVTISSNMAIRSA"
+ gene complement(1445088..1445255)
+ /locus_tag="SARI_01484"
+ CDS complement(1445088..1445255)
+ /locus_tag="SARI_01484"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570522.1"
+ /db_xref="GI:161503410"
+ /translation="MSDYAERMAMLLLIVTMLQREQRLTIGITFPSGGQFSHVFSSVF
+ ACTPALVLMPS"
+ gene 1445456..1445629
+ /locus_tag="SARI_01485"
+ CDS 1445456..1445629
+ /locus_tag="SARI_01485"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570523.1"
+ /db_xref="GI:161503411"
+ /translation="MIHWLSYKNQQFGSKRIWQQILQNHGIVLSGYVGKKVPAGYVAM
+ VLMYCDLITGEKR"
+ gene complement(1445690..1446445)
+ /locus_tag="SARI_01486"
+ CDS complement(1445690..1446445)
+ /locus_tag="SARI_01486"
+ /inference="protein motif:HMMPfam:IPR002725"
+ /inference="similar to AA sequence:REFSEQ:ZP_00734030.1"
+ /note="'KEGG: sat:SYN_02061 2.4e-18 zinc metalloprotease;
+ COG: COG1451 Predicted metal-dependent hydrolase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570524.1"
+ /db_xref="GI:161503412"
+ /db_xref="InterPro:IPR002725"
+ /translation="MSEKKSLSMNAVRFVYGDETIVVQCSPRSAVKGRILIKVHPDCR
+ VVASVPPGTPELDVISALKKRGRWIYQQLRDFREQQTHIVPRQYVSGESHYYLGKQYQ
+ LKVTEDASVPQRVKMLRGRLDVTVRQKSAERVKALLAEWYRERARDVFQRRLDLLIPQ
+ TLWVSERPPIRLRAMQTQWGNCSAKGCLTLNPWLVKASSECIDYVLLHELCHVAEHNH
+ SEEFYRLMGQVMPGWEKVKKRLDGMAGMLLADM"
+ misc_feature complement(1445717..1446346)
+ /locus_tag="SARI_01486"
+ /note="Protein of unknown function DUF45; Region: DUF45;
+ pfam01863"
+ /db_xref="CDD:145171"
+ gene complement(1446442..1447449)
+ /locus_tag="SARI_01488"
+ CDS complement(1446442..1447449)
+ /locus_tag="SARI_01488"
+ /inference="similar to AA sequence:REFSEQ:ZP_00734029.1"
+ /note="'KEGG: yps:YPTB3879 1.8e-123 possible type I
+ restriction enzyme (restriction subunit) K01153;
+ COG: COG0610 Type I site-specific restriction-modification
+ system, R (restriction) subunit and related helicases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570525.1"
+ /db_xref="GI:161503414"
+ /db_xref="REBASE:SenAZORF1488P"
+ /translation="MSSEYKRLPHLYNQLWAIFAGVKNKNDTEQLRAVLVPKMEERDG
+ EMVDIHQKTRDDFFEALTAFAGCLKVALQSATFFTDKSFTEQDRNLYKETVKQMSSLR
+ QWAMQVSGEQVNYDDYAEQVKKLLDKHVTGVAVREPDGVYEVGKMGKTEKPEEWDNNK
+ TRNETDIIKTRVTKMIEHELCDDPYAQEAFSKLLRMVIEETEKLFDHPLKQYLLFREF
+ EAQVEARKLSDIPDALAVNKHAQAYYGVFKKELPEVFAVNDDQVQHKWTKLAFEVDTI
+ IVKAVAENSLNPQDIEKAVKTSLLPRLFTACREIGAGMNQVNRIVETIIQILRVGLMK
+ S"
+ gene 1447448..1448644
+ /locus_tag="SARI_01487"
+ CDS 1447448..1448644
+ /locus_tag="SARI_01487"
+ /inference="protein motif:HMMPanther:IPR001807"
+ /inference="protein motif:HMMPfam:IPR001807"
+ /inference="similar to AA sequence:SwissProt:Q8ZPK5"
+ /note="'KEGG: cpr:CPR_1400 1.7e-27 chloride channel
+ protein K01529;
+ COG: COG0038 Chloride channel protein EriC;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative voltage-gated ClC-type chloride channel
+ ClcB"
+ /protein_id="YP_001570526.1"
+ /db_xref="GI:161503413"
+ /db_xref="InterPro:IPR001807"
+ /translation="MALYNPSISLIWLFLSNDTGSLVNAAAGLSPWRRLITPALGGLA
+ AGLLLWRWQKMNQQRPHAPTDYMEALQTDGQFDVGASLVKSLASLLVVVSGSAIGREG
+ AMILLAALAASGFARRLTPREEWKLWIASGAAAGMAGAYHAPLAGSLFIAEILFGTLM
+ LASLGPVVVSAVVALLTTNLLNGSNSLLYTVHLTLDLHTREYFMIVSTGLVAGLCGPL
+ LMWLMTASHNSFLRLKLSPPWQLALGGLIVGILSLLTPTVWGNGYSVVQSFLLSPPLF
+ SLISGIFACKILAVLASSGSGAPGGVFTPTLFVGLSIGMLLGRIWGFWLPGSDEIAIL
+ LGLAGMATLLAATTHAPIMSTLMICEMTGEYQLLPGLLIACVVASVLSRTLRHNSIYR
+ QHAAEH"
+ misc_feature 1447469..1448584
+ /locus_tag="SARI_01487"
+ /note="CLC voltage-gated chloride channel. The ClC
+ chloride channels catalyse the selective flow of Cl- ions
+ across cell membranes, thereby regulating electrical
+ excitation in skeletal muscle and the flow of salt and
+ water across epithelial barriers. This...; Region:
+ Voltage_gated_ClC; cd00400"
+ /db_xref="CDD:238233"
+ misc_feature 1447475..1448635
+ /locus_tag="SARI_01487"
+ /note="Chloride channel protein EriC [Inorganic ion
+ transport and metabolism]; Region: EriC; COG0038"
+ /db_xref="CDD:223116"
+ misc_feature order(1447640..1447654,1447742..1447756,1448348..1448362)
+ /locus_tag="SARI_01487"
+ /note="Cl- selectivity filter; other site"
+ /db_xref="CDD:238233"
+ misc_feature order(1447643..1447645,1447649..1447651,1447748..1447753,
+ 1448348..1448356)
+ /locus_tag="SARI_01487"
+ /note="Cl- binding residues [ion binding]; other site"
+ /db_xref="CDD:238233"
+ misc_feature 1447748..1447750
+ /locus_tag="SARI_01487"
+ /note="pore gating glutamate residue; other site"
+ /db_xref="CDD:238233"
+ misc_feature order(1447880..1447882,1447907..1447909,1447952..1447954,
+ 1447973..1447975,1448492..1448494,1448501..1448503,
+ 1448525..1448527,1448549..1448551,1448570..1448575)
+ /locus_tag="SARI_01487"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238233"
+ gene complement(1448600..1449376)
+ /locus_tag="SARI_01489"
+ CDS complement(1448600..1449376)
+ /locus_tag="SARI_01489"
+ /inference="protein motif:HMMPfam:IPR002586"
+ /inference="protein motif:HMMPIR:IPR004472"
+ /inference="protein motif:HMMTigr:IPR004472"
+ /inference="similar to AA sequence:REFSEQ:YP_216494.1"
+ /note="'DTB synthetase; dethiobiotin synthase; involved in
+ production of dethiobiotin from ATP and
+ 7,8-diaminononanoate and carbon dioxide; contains
+ magnesium'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative dithiobiotin synthetase"
+ /protein_id="YP_001570527.1"
+ /db_xref="GI:161503415"
+ /db_xref="InterPro:IPR002586"
+ /db_xref="InterPro:IPR004472"
+ /translation="MPLPYLRLPSLYYFPGLYFRSITVELVMLKRFFITGTDTSVGKT
+ VVSRALLQALASGGKSVAGYKPVAKGSKETPEGMRNKDAVVLQSVSSLELPYEAINPI
+ ALSEEESSVAHSCPINYTLLSNGLANLSDKVDHVVVENTGGWRSLMNDLRPLSEWVVQ
+ EQLPVLMVVGIQEGCINHALLTAQAVANDGLPLIGWVANRINPGLAHYAEIIDVLGKK
+ LPAPLIGELPYLPRAEQRELGQYIRLSMLGSVLSVDRIMA"
+ misc_feature complement(1448603..1449295)
+ /locus_tag="SARI_01489"
+ /note="putative dithiobiotin synthetase; Provisional;
+ Region: PRK12374"
+ /db_xref="CDD:237083"
+ misc_feature complement(1448684..1449289)
+ /locus_tag="SARI_01489"
+ /note="AAA domain; Region: AAA_26; pfam13500"
+ /db_xref="CDD:222178"
+ gene complement(1449421..1450641)
+ /locus_tag="SARI_01490"
+ CDS complement(1449421..1450641)
+ /locus_tag="SARI_01490"
+ /inference="protein motif:HMMPfam:IPR000600"
+ /inference="similar to AA sequence:REFSEQ:NP_460448.1"
+ /note="'KEGG: eci:UTI89_C1781 1.8e-196 mlc; putative
+ NAGC-like transcriptional regulator K00845;
+ COG: COG1940 Transcriptional regulator/sugar kinase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570528.1"
+ /db_xref="GI:161503416"
+ /db_xref="InterPro:IPR000600"
+ /translation="MVADSQPGHIDQIKQTNAGAVYRLIDQLGPVSRIDLSRLAQLAP
+ ASITKIVREMLEAHLVQELEIKEAGSRGRPAVGLVVETEAWHYLSIRISRGEIFLALH
+ DLSSKLVVEENLPLPLTEATPLLERIITHVDQFFIRHQQKLERLTSIAITLPGIIDTE
+ NGIVHRMPFYEDVKEMPLGDALERHTGVPVYIQHDISAWTMAEALFGASRGARDVIQV
+ VIDHNVGAGVITDGHLLHAGSSSLVEIGHTQVDPYGKRCYCGNHGCLETIASVESVLE
+ LTQLRLNQSMSSMLHGQPLTVDSLCQAAIQGDLLAKDIISGVGAHVGRILAIMVNLFN
+ PQKILIGSPLSKAADILFPAIVDSIRQQALPAYSKNTVVESTQFTNQGTMAGAALVKD
+ AMYNGSLLIRLLQG"
+ misc_feature complement(1450462..1450584)
+ /locus_tag="SARI_01490"
+ /note="Iron dependent repressor, N-terminal DNA binding
+ domain; Region: Fe_dep_repress; pfam01325"
+ /db_xref="CDD:110335"
+ misc_feature complement(1449424..1450404)
+ /locus_tag="SARI_01490"
+ /note="Transcriptional regulator/sugar kinase
+ [Transcription / Carbohydrate transport and metabolism];
+ Region: NagC; COG1940"
+ /db_xref="CDD:224851"
+ misc_feature complement(1449916..>1450227)
+ /locus_tag="SARI_01490"
+ /note="Nucleotide-Binding Domain of the sugar
+ kinase/HSP70/actin superfamily; Region:
+ NBD_sugar-kinase_HSP70_actin; cd00012"
+ /db_xref="CDD:212657"
+ gene complement(1450769..1451668)
+ /locus_tag="SARI_01491"
+ CDS complement(1450769..1451668)
+ /locus_tag="SARI_01491"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="protein motif:HMMPfam:IPR005119"
+ /inference="similar to AA sequence:REFSEQ:NP_455992.1"
+ /note="'KEGG: shn:Shewana3_3435 1.6e-21 transcriptional
+ regulator, LysR family K06022;
+ COG: COG0583 Transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570529.1"
+ /db_xref="GI:161503417"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR005119"
+ /db_xref="InterPro:IPR011991"
+ /translation="MNIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQILEQQ
+ VGARLLARTNRSVALTAAGRQFLADSRQILSLVNDAAARAERLHQGEAGEVRIGFTSS
+ APFIRAVSNTFSLFRQSYPGVHMQTREMNTREQIAPLNEGILDIGLLRNTPLPDTLNH
+ EVILHEPLMAMIPREHRLAQKPVVSLTELAKEPFVFFDPHVGTGLYDDILGLMRRYNL
+ TPTIAQEVGEAMTIIGLVAAGLGVSILPASFKRVRMSEMRWVPLAEEDAVSEMWLVWS
+ KHHEQSHAVQRFCQLLVTAVRCD"
+ misc_feature complement(1450793..1451662)
+ /locus_tag="SARI_01491"
+ /note="DNA-binding transcriptional activator XapR;
+ Provisional; Region: PRK09986"
+ /db_xref="CDD:182183"
+ misc_feature complement(1451477..1451656)
+ /locus_tag="SARI_01491"
+ /note="Bacterial regulatory helix-turn-helix protein, lysR
+ family; Region: HTH_1; pfam00126"
+ /db_xref="CDD:215735"
+ misc_feature complement(1450793..1451389)
+ /locus_tag="SARI_01491"
+ /note="The C-terminal substrate binding domain of
+ LysR-type transcriptional regulators involved in the
+ catabolism of aromatic compounds and that of other related
+ regulators, contains type 2 periplasmic binding fold;
+ Region: PBP2_LTTR_aromatics_like; cd08414"
+ /db_xref="CDD:176106"
+ misc_feature complement(order(1450901..1450903,1450955..1450960,
+ 1450964..1450969,1450985..1450990,1451045..1451050,
+ 1451150..1451152,1451282..1451284,1451288..1451290,
+ 1451294..1451296,1451318..1451320,1451327..1451332,
+ 1451336..1451341,1451348..1451350,1451372..1451374))
+ /locus_tag="SARI_01491"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:176106"
+ misc_feature complement(order(1451054..1451056,1451075..1451080,
+ 1451219..1451221,1451369..1451371))
+ /locus_tag="SARI_01491"
+ /note="substrate binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:176106"
+ gene 1451788..1453041
+ /locus_tag="SARI_01492"
+ CDS 1451788..1453041
+ /locus_tag="SARI_01492"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="protein motif:ScanRegExp:IPR005829"
+ /inference="similar to AA sequence:INSD:CAD01827.1"
+ /note="'KEGG: shn:Shewana3_1692 3.9e-50 Xaa-His
+ dipeptidase K01270;
+ COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570530.2"
+ /db_xref="GI:448236231"
+ /db_xref="InterPro:IPR005829"
+ /db_xref="InterPro:IPR011701"
+ /translation="MSRTTILDNATTSDIDEQRYSQSVQYIKRGTAPFMRVTLALFSA
+ GLATFALLYCVQPILPILSREFGVSPASSSVSLSISTAMLAIGLLFTGPLSDAIGRKP
+ VMVTALLLASCCTLLSTMMTSWHGILIMRALIGLSLSGVAAVGMTYLSEEIHPSFVAF
+ SMGLYISGNSIGGMSGRLLSGVMTDFFNWRIALATIGCFALASALMFWKILPASQHFR
+ PTSLRPKTLFINFRLHWRDRGLPLLFAEGFLLMGAFVTLFNYIGYRLMLSPWELNQAV
+ VGLLSVAYLTGTWSSPKAGAMTSRYGRGPVMLFSTAVMLCGLLLTLFTSLWLIFAGML
+ LFSAGFFAAHSVASSWIGPRARRGKGQASSLYLFSYYMGSSIAGTLGGVFWHSYGWNG
+ VGGFIALMLVLAILVGTRLHHRLHA"
+ misc_feature 1451890..1453008
+ /locus_tag="SARI_01492"
+ /note="Arabinose efflux permease [Carbohydrate transport
+ and metabolism]; Region: AraJ; COG2814"
+ /db_xref="CDD:225371"
+ misc_feature 1451899..1453008
+ /locus_tag="SARI_01492"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature order(1451941..1451943,1451950..1451958,1451962..1451967,
+ 1452016..1452018,1452025..1452030,1452037..1452039,
+ 1452049..1452054,1452058..1452063,1452199..1452204,
+ 1452211..1452216,1452223..1452228,1452235..1452237,
+ 1452271..1452276,1452283..1452288,1452304..1452306,
+ 1452538..1452540,1452547..1452552,1452559..1452564,
+ 1452571..1452573,1452613..1452615,1452625..1452627,
+ 1452637..1452639,1452646..1452648,1452658..1452660,
+ 1452796..1452798,1452805..1452810,1452817..1452819,
+ 1452829..1452834,1452841..1452843,1452871..1452876,
+ 1452883..1452888,1452895..1452900,1452907..1452909)
+ /locus_tag="SARI_01492"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene 1453414..1453689
+ /locus_tag="SARI_01493"
+ CDS 1453414..1453689
+ /locus_tag="SARI_01493"
+ /inference="similar to AA sequence:REFSEQ:YP_216490.1"
+ /note="required for growth and survival under moderately
+ acid conditions"
+ /codon_start=1
+ /transl_table=11
+ /product="acid shock protein precursor"
+ /protein_id="YP_001570531.1"
+ /db_xref="GI:161503419"
+ /translation="MKNQIEGIKMKKVLALVVAAAMGLSSAAFAAETATPAKTAAPAK
+ TTQHHKKQHKKQHKAVEQKAQAAKKHQKKDGKAPAKTTSKPTTQPAA"
+ gene 1453958..1454779
+ /locus_tag="SARI_01494"
+ CDS 1453958..1454779
+ /locus_tag="SARI_01494"
+ /inference="protein motif:FPrintScan:IPR008256"
+ /inference="protein motif:HMMPfam:IPR001254"
+ /inference="protein motif:ScanRegExp:IPR001254"
+ /inference="protein motif:superfamily:IPR009003"
+ /inference="similar to AA sequence:REFSEQ:YP_150626.1"
+ /note="'KEGG: spt:SPA1370 4.0e-144 putative secreted
+ protein K04775;
+ COG: COG3591 V8-like Glu-specific endopeptidase;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570532.1"
+ /db_xref="GI:161503420"
+ /db_xref="InterPro:IPR001254"
+ /db_xref="InterPro:IPR008256"
+ /db_xref="InterPro:IPR009003"
+ /translation="MHKTIAVLLGIVCFLPVMAKARGAETDATDASDVKTLFFNHDDR
+ TPVADPTQSPWDAIGQLETASGNLCTATLISPHIALTAGHCLLTPPTGKPDKAVTLRF
+ VAQKGIWRYEIHGIEGRVEPSLGRRLKADGDGWIVPPAGASWDFGLIILRYPPSGIRP
+ VPLFTGDKAALTAALKAADRKVTQSGYPEDHLNALYSHQDCVVTGWAQNAVLSHQCDT
+ LPGDSGSPLLLETDSGWQLIGVQSSAPAAKDRWRADNRAISVTGFRDKLKALAQD"
+ misc_feature 1453961..1454773
+ /locus_tag="SARI_01494"
+ /note="V8-like Glu-specific endopeptidase [Amino acid
+ transport and metabolism]; Region: COG3591"
+ /db_xref="CDD:226119"
+ gene complement(1454829..1455158)
+ /locus_tag="SARI_01495"
+ CDS complement(1454829..1455158)
+ /locus_tag="SARI_01495"
+ /inference="protein motif:HMMPfam:IPR000390"
+ /inference="similar to AA sequence:REFSEQ:NP_455997.1"
+ /note="'with MdtJ is involved in resistance to
+ deoxycholate, nalidixic acid, fosfomycin, and SDS'"
+ /codon_start=1
+ /transl_table=11
+ /product="multidrug efflux system protein MdtI"
+ /protein_id="YP_001570533.1"
+ /db_xref="GI:161503421"
+ /db_xref="InterPro:IPR000390"
+ /translation="MQQFEWVHGAWLALAIILEIAANVLLKFSDGFRRKCYGILSLAA
+ VLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWVLFGQRLNPKGWVGVVLLLVG
+ MIMIKLA"
+ misc_feature complement(1454832..1455158)
+ /locus_tag="SARI_01495"
+ /note="multidrug efflux system protein MdtI; Provisional;
+ Region: PRK10650"
+ /db_xref="CDD:182618"
+ gene complement(1455145..1455507)
+ /locus_tag="SARI_01496"
+ CDS complement(1455145..1455507)
+ /locus_tag="SARI_01496"
+ /inference="protein motif:HMMPfam:IPR000390"
+ /inference="similar to AA sequence:INSD:AAX65406.1"
+ /note="'with MdtI is involved in resistance to
+ deoxycholate , nalidixic acid, fosfomycin, and SDS'"
+ /codon_start=1
+ /transl_table=11
+ /product="multidrug efflux system protein MdtJ"
+ /protein_id="YP_001570534.1"
+ /db_xref="GI:161503422"
+ /db_xref="InterPro:IPR000390"
+ /translation="MFYWILLALAIVAEITGTLSMKWASVGNGNAGYILMLVMITLSY
+ IFLSFAVKKIALGVAYALWEGIGILFITVFSVLLFDEVLSTMKIVGLLTLIVGIVLIK
+ SGTRKPGKPVKEATRATI"
+ misc_feature complement(1455148..1455507)
+ /locus_tag="SARI_01496"
+ /note="multidrug efflux system protein MdtJ; Provisional;
+ Region: PRK10452"
+ /db_xref="CDD:182471"
+ gene complement(1455619..1455789)
+ /locus_tag="SARI_01497"
+ CDS complement(1455619..1455789)
+ /locus_tag="SARI_01497"
+ /inference="similar to AA sequence:REFSEQ:YP_150628.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570535.1"
+ /db_xref="GI:161503423"
+ /translation="MFNYRGQLSSAMTRSNTADNCNIMDNMFSAFFSTQIHLHSTSFF
+ LLIGEQHWRNAL"
+ gene complement(1456032..1457420)
+ /gene="pntB"
+ /locus_tag="SARI_01498"
+ CDS complement(1456032..1457420)
+ /gene="pntB"
+ /locus_tag="SARI_01498"
+ /inference="protein motif:HMMPfam:IPR004003"
+ /inference="protein motif:HMMPIR:IPR012136"
+ /inference="similar to AA sequence:REFSEQ:NP_805195.1"
+ /note="catalyzes reversible transfer of hydride ion
+ equivalent between NAD and NADP; membrane-bound proton
+ pump that translocates protons from cytosolic to
+ periplasmic side of the inner membrane; forms a tetramer
+ composed of two alpha and 2 beta subunits;
+ AB-stereospecific enzyme"
+ /codon_start=1
+ /transl_table=11
+ /product="pyridine nucleotide transhydrogenase"
+ /protein_id="YP_001570536.1"
+ /db_xref="GI:161503424"
+ /db_xref="InterPro:IPR004003"
+ /db_xref="InterPro:IPR012136"
+ /translation="MSGGLVTAAYIVAAILFIFSLAGLSKHETSRQGNNFGIAGMAIA
+ LLATIFGPDTGNVAWILVAMIIGGAIGIRMAKKVEMTEMPELVAILHSFVGLAAVLVG
+ FNSYLYHDASLAPVLVNIHLTEVFLGIFIGAVTFTGSIVAFGKLRGKISSKPLMLPNR
+ HKMNLAALVVSFLLLLVFVRTESVGLQVLALLLMTIIALAFGWHLVASIGGADMPVVV
+ SMLNSYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFISVIAGGFG
+ TDGSSTGDDQEAGEHREITAEETAEMLKNSHSVIITPGYGMAVAQAQYPVAEITEKLR
+ ARGINVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFADTDTVLVIGAND
+ TVNPAAQDDPRSPIAGMPVLEVWKAQNVVVFKRSMNTGYAGVQNPLFFKENTQMLFGD
+ AKASVDAILKAL"
+ misc_feature complement(1456035..1457420)
+ /gene="pntB"
+ /locus_tag="SARI_01498"
+ /note="pyridine nucleotide transhydrogenase; Provisional;
+ Region: pntB; PRK09444"
+ /db_xref="CDD:236520"
+ misc_feature complement(1456035..1457411)
+ /gene="pntB"
+ /locus_tag="SARI_01498"
+ /note="NAD(P) transhydrogenase beta subunit; Region: PNTB;
+ pfam02233"
+ /db_xref="CDD:216941"
+ gene complement(1457431..1458960)
+ /gene="pntA"
+ /locus_tag="SARI_01499"
+ CDS complement(1457431..1458960)
+ /gene="pntA"
+ /locus_tag="SARI_01499"
+ /inference="protein motif:HMMPfam:IPR007698"
+ /inference="protein motif:HMMPfam:IPR007886"
+ /inference="protein motif:HMMTigr:IPR004571"
+ /inference="protein motif:ScanRegExp:IPR008142"
+ /inference="protein motif:ScanRegExp:IPR008143"
+ /inference="similar to AA sequence:INSD:AAV77319.1"
+ /note="forms a tetramer composed of 2 alpha subunits and 2
+ beta subunits in the inner membrane; involved in
+ catalyzing transfer of hydride ion equivalents between NAD
+ and NADP; stereospecific (AB-specific); functions as a
+ proton pump by translocating protons from cytoplasm to
+ periplasm"
+ /codon_start=1
+ /transl_table=11
+ /product="NAD(P) transhydrogenase subunit alpha"
+ /protein_id="YP_001570537.1"
+ /db_xref="GI:161503425"
+ /db_xref="InterPro:IPR004571"
+ /db_xref="InterPro:IPR007698"
+ /db_xref="InterPro:IPR007886"
+ /db_xref="InterPro:IPR008142"
+ /db_xref="InterPro:IPR008143"
+ /translation="MRIGIPKERLPNETRVAATPKTVEQLLKLGFSVAIESGAGQLAS
+ FDDKAFAQAGADIVDGNAIWQSEIILKVNAPEEDEIALLNPGTTLVSFIWPAQNPGLM
+ EKLAERKVTVMAMDSVPRISRAQSLDALSSMANIAGYRAIVEAAHEFGRFFTGQITAA
+ GKVPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKE
+ EAGSGDGYAKVMSEAFIKAEMALFAAQAKEVDIIVTTALIPGKPAPKLITRDMVDSMK
+ AGSVIVDLAAQNGGNCEYTVANQVVTTDNGVKVIGYTDLPGRLPTQSSQLYGTNLVNL
+ LKLLCKEKDGNIDVDFDDVVIRGVTVIRDGDVTWPAPPIQVSAQPQAAPKAAPAPKEP
+ GKPASPWRKYALMALAIILFGWLADVAPKEFLGHFTVFALACVVGYYVVWNVSHALHT
+ PLMSVTNAISGIIVVGALLQIGQGGWVSFLSFIAVLIASINIFGGFTVTQRMLKMFRK
+ N"
+ misc_feature complement(1457437..1458960)
+ /gene="pntA"
+ /locus_tag="SARI_01499"
+ /note="NAD(P) transhydrogenase subunit alpha; Provisional;
+ Region: pntA; PRK09424"
+ /db_xref="CDD:236507"
+ misc_feature complement(1457869..1458960)
+ /gene="pntA"
+ /locus_tag="SARI_01499"
+ /note="Rubrum transdehydrogenase NAD-binding and catalytic
+ domains; Region: Rubrum_tdh; cd05304"
+ /db_xref="CDD:240629"
+ misc_feature complement(order(1458013..1458015,1458019..1458021,
+ 1458100..1458102,1458685..1458687,1458742..1458744,
+ 1458916..1458918))
+ /gene="pntA"
+ /locus_tag="SARI_01499"
+ /note="ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:240629"
+ misc_feature complement(order(1457971..1457976,1457983..1457985,
+ 1457995..1458000,1458127..1458132,1458400..1458405,
+ 1458472..1458474,1458481..1458489,1458493..1458495,
+ 1458499..1458516,1458520..1458525,1458529..1458534,
+ 1458541..1458546,1458553..1458558,1458583..1458588,
+ 1458829..1458831))
+ /gene="pntA"
+ /locus_tag="SARI_01499"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:240629"
+ misc_feature complement(order(1458163..1458165,1458169..1458171,
+ 1458190..1458198,1458247..1458249,1458280..1458282,
+ 1458370..1458378,1458436..1458447,1458568..1458570,
+ 1458577..1458579,1458586..1458588,1458598..1458603))
+ /gene="pntA"
+ /locus_tag="SARI_01499"
+ /note="NAD(P) binding site [chemical binding]; other site"
+ /db_xref="CDD:240629"
+ misc_feature complement(order(1458337..1458348,1458352..1458357,
+ 1458403..1458405,1458424..1458429,1458556..1458558,
+ 1458586..1458588,1458592..1458597))
+ /gene="pntA"
+ /locus_tag="SARI_01499"
+ /note="trimer interface B [polypeptide binding]; other
+ site"
+ /db_xref="CDD:240629"
+ misc_feature complement(order(1458391..1458393,1458397..1458399,
+ 1458466..1458468,1458475..1458477,1458484..1458498))
+ /gene="pntA"
+ /locus_tag="SARI_01499"
+ /note="trimer interface A [polypeptide binding]; other
+ site"
+ /db_xref="CDD:240629"
+ misc_feature complement(1457437..1457691)
+ /gene="pntA"
+ /locus_tag="SARI_01499"
+ /note="Domain of unknown function (DUF3814); Region:
+ DUF3814; pfam12769"
+ /db_xref="CDD:221763"
+ gene 1459487..1460431
+ /locus_tag="SARI_01500"
+ CDS 1459487..1460431
+ /locus_tag="SARI_01500"
+ /inference="protein motif:HMMPfam:IPR010854"
+ /inference="protein motif:superfamily:IPR011050"
+ /inference="similar to AA sequence:REFSEQ:YP_150632.1"
+ /note="'COG: NOG06063 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570538.1"
+ /db_xref="GI:161503426"
+ /db_xref="InterPro:IPR010854"
+ /db_xref="InterPro:IPR011050"
+ /translation="MKLKNTLLASALLSAAAFSVHAATELTPEQAAALKPYDRIVITG
+ RFNAIGDAVSAVSRRADKEGAASFYVVDTSEFGNSGNWRVVADVYKADAPKADVPKNR
+ IINGIVELPKDQAVQLEPYDTVTVQGFYRSQPEVNDAITKAAKQEGAYAFYIVRQVDA
+ NQGGNQRITAFIYKQDAKKRIVQSPDAIPADSEAGRAALAQGGEAAKKVEIPGVATSA
+ SPSAEVGRFFETQSTKGGRYTVTLPDGTKVEELNKATAAMMVPFDSIKFTGNYGNMTE
+ ISYQVAKRAAKKGAKYYHITRQWQERGNNITISADLYK"
+ misc_feature 1459586..1459756
+ /locus_tag="SARI_01500"
+ /note="Protein of unknown function (DUF1471); Region:
+ DUF1471; pfam07338"
+ /db_xref="CDD:219380"
+ misc_feature 1459838..1460008
+ /locus_tag="SARI_01500"
+ /note="Protein of unknown function (DUF1471); Region:
+ DUF1471; pfam07338"
+ /db_xref="CDD:219380"
+ misc_feature 1460261..1460428
+ /locus_tag="SARI_01500"
+ /note="Protein of unknown function (DUF1471); Region:
+ DUF1471; pfam07338"
+ /db_xref="CDD:219380"
+ gene 1460731..1462113
+ /locus_tag="SARI_01501"
+ CDS 1460731..1462113
+ /locus_tag="SARI_01501"
+ /inference="protein motif:HMMPanther:IPR002293"
+ /inference="protein motif:HMMPfam:IPR004841"
+ /inference="protein motif:HMMTigr:IPR004754"
+ /inference="similar to AA sequence:INSD:AAO68993.1"
+ /note="'KEGG: eci:UTI89_C0120 1.6e-08 aroP; aromatic amino
+ acid transport protein AroP K03293;
+ COG: COG0531 Amino acid transporters;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570539.1"
+ /db_xref="GI:161503427"
+ /db_xref="InterPro:IPR002293"
+ /db_xref="InterPro:IPR004754"
+ /db_xref="InterPro:IPR004841"
+ /translation="MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWA
+ ITGVGILLLAFAMLILTRIRSELDGGIFTYAREGFGELIGFCSAWGYWLCAVIANVSY
+ LVIVFSALSFFTDTPTLRLFGDGNTWQAIVGASVLLWIVHFLILRGVQTAASINLVAT
+ LAKLLPLGTFIVLAVMLFKLDTFTLDFTGVELGIPVWEQVKNTMLITLWVFIGVEGAV
+ VVSARAKNKRDVGRATLLAVLAALGIYLLVTLLSLGVLARPELAEMRNPSMAGLMVKM
+ MGPWGEIIIAAGLIVSVCGAYLSWTIMAAEVPLLAAAYKSFPGIFARQNAQGAPSASL
+ WLTNSCVQICLVLIWLTGSDYNTLLTIASEMILVPYFLVGAFLLKIATCPLHRAVGIG
+ ACIYGLWLLYASGPMHLLLSVVLYAPGLLVFLYARRTHKHDNVLNRQEVALIGLLLVA
+ AIPATWMLVG"
+ misc_feature 1460737..1462110
+ /locus_tag="SARI_01501"
+ /note="transporter, basic amino acid/polyamine antiporter
+ (APA) family; Region: 2A0302; TIGR00905"
+ /db_xref="CDD:129983"
+ misc_feature 1460740..>1461447
+ /locus_tag="SARI_01501"
+ /note="Spore germination protein; Region: Spore_permease;
+ cl17796"
+ /db_xref="CDD:248350"
+ gene complement(1462177..1462512)
+ /locus_tag="SARI_01502"
+ CDS complement(1462177..1462512)
+ /locus_tag="SARI_01502"
+ /inference="protein motif:HMMPfam:IPR009707"
+ /inference="similar to AA sequence:INSD:CAD01891.1"
+ /note="'COG: COG3136 Uncharacterized membrane protein
+ required for alginate biosynthesis;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570540.1"
+ /db_xref="GI:161503428"
+ /db_xref="InterPro:IPR009707"
+ /translation="MGLVIKAALGALVVVLIGLLSKMKNYYIAGLIPLFPTFALIAHY
+ IVASDRGIDAMRTTIVFSMWSIIPYFIYLASLWYFSGMMRLPVALGGAVVCWGISAWL
+ LIFCWIKWH"
+ misc_feature complement(1462180..1462452)
+ /locus_tag="SARI_01502"
+ /note="GlpM protein; Region: GlpM; pfam06942"
+ /db_xref="CDD:148516"
+ gene 1462639..1463373
+ /locus_tag="SARI_01503"
+ CDS 1462639..1463373
+ /locus_tag="SARI_01503"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:BlastProDom:IPR001867"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR001789"
+ /inference="protein motif:HMMPfam:IPR001867"
+ /inference="protein motif:HMMSmart:IPR001789"
+ /inference="protein motif:superfamily:IPR011006"
+ /inference="similar to AA sequence:REFSEQ:YP_150635.1"
+ /note="response regulator in two-component regulatory
+ system with RstB"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional regulator RstA"
+ /protein_id="YP_001570541.1"
+ /db_xref="GI:161503429"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR001867"
+ /db_xref="InterPro:IPR011006"
+ /db_xref="InterPro:IPR011991"
+ /translation="MNRIVFVEDDSEVGSLIAAYLAKHDIDVIVEPRGDRAEDLILTT
+ QPDLVLLDIMLPGKDGMTICRDLRGRWQGPIVLLTSLDSDMNHILALEMGACDYILKT
+ TPPAVLLARLRLHLRQNKQAQQAKSLQESALTPHKTLRFGALTIDPLNRAVQLNGELI
+ SLSTADFELLWELATHAGQIMDRDALLKTLRGVNYDGLDRSVDVAISRLRKKLLDSAA
+ EPYRIKTIRNKGYLFAPHAWDETTKE"
+ misc_feature 1462639..1463358
+ /locus_tag="SARI_01503"
+ /note="DNA-binding transcriptional regulator RstA;
+ Provisional; Region: PRK10701"
+ /db_xref="CDD:236738"
+ misc_feature 1462657..1462941
+ /locus_tag="SARI_01503"
+ /note="Signal receiver domain; originally thought to be
+ unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
+ recently identified in eukaroytes ETR1 Arabidopsis
+ thaliana; this domain receives the signal from the sensor
+ partner in a two-component systems; Region: REC; cd00156"
+ /db_xref="CDD:238088"
+ misc_feature order(1462660..1462665,1462792..1462794,1462816..1462818,
+ 1462873..1462875,1462930..1462932,1462939..1462941)
+ /locus_tag="SARI_01503"
+ /note="active site"
+ /db_xref="CDD:238088"
+ misc_feature 1462792..1462794
+ /locus_tag="SARI_01503"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238088"
+ misc_feature order(1462801..1462806,1462810..1462818)
+ /locus_tag="SARI_01503"
+ /note="intermolecular recognition site; other site"
+ /db_xref="CDD:238088"
+ misc_feature 1463053..1463337
+ /locus_tag="SARI_01503"
+ /note="Effector domain of response regulator. Bacteria and
+ certain eukaryotes like protozoa and higher plants use
+ two-component signal transduction systems to detect and
+ respond to changes in the environment. The system consists
+ of a sensor histidine kinase and...; Region: trans_reg_C;
+ cd00383"
+ /db_xref="CDD:238225"
+ misc_feature order(1463125..1463127,1463182..1463187,1463239..1463241,
+ 1463248..1463250,1463272..1463277,1463311..1463313,
+ 1463326..1463328)
+ /locus_tag="SARI_01503"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:238225"
+ gene 1463595..1463729
+ /locus_tag="SARI_01504"
+ CDS 1463595..1463729
+ /locus_tag="SARI_01504"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570542.1"
+ /db_xref="GI:161503430"
+ /translation="MLAFRSIDVFFRKMSNKTNYMYKYIITDIFILNMTISKGKFCIN
+ "
+ gene 1463852..1465003
+ /locus_tag="SARI_01505"
+ CDS 1463852..1465003
+ /locus_tag="SARI_01505"
+ /inference="protein motif:FPrintScan:IPR001702"
+ /inference="protein motif:FPrintScan:IPR001897"
+ /inference="protein motif:HMMPfam:IPR001702"
+ /inference="similar to AA sequence:REFSEQ:YP_150636.1"
+ /note="'COG: COG3203 Outer membrane protein (porin);
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570543.1"
+ /db_xref="GI:161503431"
+ /db_xref="InterPro:IPR001702"
+ /db_xref="InterPro:IPR001897"
+ /translation="MKRKVLALVIPALLAAGAVHAAEIYNKDGNKLDLYGKIDGLHYF
+ SDDSSKDGDQTYVRFGFKGETQINDQLTGYGQWEYNVQTNTSEGDGANSWTRLAFAGL
+ KFGDYGSFDYGRNYGVLYDVEGWTDMLPEFGGDSYTYADNYMTGRANGVATYRNTDFF
+ GLVDGLNFALQYQGKNESQSADDVNIGTNNRNDSDDMRYDNGDGFGISTTYDIGMGFS
+ AGAAYTTSDRTNEQVNAGGTIAGGDKADAWTAGLKYDANNIYLATMYSETRNMTPYGK
+ TDTGYAGGVANKTQNFEVTAQYQFDFGLRPAVSFLMSKGKDLSYNNVNGDDKDLVKYA
+ DVGATYYFNKNFSTYVDYKINLLDDDDQFYKDAGISTDDIVALGMVYQF"
+ misc_feature 1463918..1465000
+ /locus_tag="SARI_01505"
+ /note="Outer membrane protein (porin) [Cell envelope
+ biogenesis, outer membrane]; Region: OmpC; COG3203"
+ /db_xref="CDD:225744"
+ misc_feature 1463939..1465000
+ /locus_tag="SARI_01505"
+ /note="Porins form aqueous channels for the diffusion of
+ small hydrophillic molecules across the outer membrane.
+ Individual 16-strand anti-parallel beta-barrels form a
+ central pore, and trimerizes thru mainly hydrophobic
+ interactions at the interface. Trimers...; Region:
+ gram_neg_porins; cd00342"
+ /db_xref="CDD:238208"
+ misc_feature order(1463939..1463941,1463945..1463947,1463963..1463965,
+ 1463969..1463977,1464038..1464052,1464068..1464070,
+ 1464074..1464082,1464086..1464088,1464092..1464103,
+ 1464134..1464139,1464143..1464157,1464185..1464193,
+ 1464290..1464292,1464296..1464301,1464875..1464880,
+ 1464887..1464889,1464986..1464988,1464992..1464994,
+ 1464998..1465000)
+ /locus_tag="SARI_01505"
+ /note="trimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238208"
+ misc_feature order(1463960..1463962,1464023..1464025,1464137..1464139,
+ 1464230..1464232,1464290..1464292)
+ /locus_tag="SARI_01505"
+ /note="eyelet of channel; other site"
+ /db_xref="CDD:238208"
+ gene 1465477..1466778
+ /locus_tag="SARI_01506"
+ CDS 1465477..1466778
+ /locus_tag="SARI_01506"
+ /inference="protein motif:Gene3D:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003660"
+ /inference="protein motif:HMMPfam:IPR003661"
+ /inference="protein motif:HMMSmart:IPR003594"
+ /inference="protein motif:HMMSmart:IPR003660"
+ /inference="protein motif:HMMSmart:IPR003661"
+ /inference="protein motif:superfamily:IPR003594"
+ /inference="protein motif:superfamily:IPR009082"
+ /inference="similar to AA sequence:REFSEQ:YP_150638.1"
+ /note="'KEGG: spt:SPA1384 5.8e-223 rstB; two component
+ sensor kinase K07639;
+ COG: COG0642 Signal transduction histidine kinase;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="sensor protein RstB"
+ /protein_id="YP_001570544.1"
+ /db_xref="GI:161503432"
+ /db_xref="InterPro:IPR003594"
+ /db_xref="InterPro:IPR003660"
+ /db_xref="InterPro:IPR003661"
+ /db_xref="InterPro:IPR009082"
+ /translation="MKKLFVQFYLLLFVCFLVMTLLVGLVYKFTAERAGRQSLDDLMK
+ SSLYLMRSELREIPPREWGKTLKEMDLNLSFDLRVEPLNHYKLDAATAQRLREGDIVA
+ LDDQYTFIQRIPRSHYVLAVGPVPYLYFLHQMRLLDIALMALIAFSLAFPVFIWMRPH
+ WQEMLRLESAAQRFGEGHLTERLHFDNGSSFERLGVAFNQMADNINALIASKKQLIDG
+ IAHELRTPLVRLRYRLEMSENLTPPESQALNRDIGQLEALIEELLTYARLDRPQNELM
+ LTEPDLPAWLSAHLQDVQSVNPERAVNLHTCATGNYGALDMRLMARVLDNLLNNALRY
+ SHSTVQVSLLLDGSQATLIVEDDGPGIEADARERIFEPFVRLDPSRDRTTGGCGLGLA
+ IVHSIALAMGGSVACDDSELGGAKFIFHWPVWHAIPGMAAA"
+ misc_feature 1465477..1466775
+ /locus_tag="SARI_01506"
+ /note="sensor protein RstB; Provisional; Region: PRK10604"
+ /db_xref="CDD:236724"
+ misc_feature 1465972..1466097
+ /locus_tag="SARI_01506"
+ /note="Histidine kinase, Adenylyl cyclase,
+ Methyl-accepting protein, and Phosphatase (HAMP) domain.
+ HAMP is a signaling domain which occurs in a wide variety
+ of signaling proteins, many of which are bacterial. The
+ HAMP domain consists of two alpha helices...; Region:
+ HAMP; cd06225"
+ /db_xref="CDD:100122"
+ misc_feature order(1465975..1465980,1465987..1465992,1465996..1465998,
+ 1466044..1466049,1466053..1466058,1466065..1466070,
+ 1466074..1466079,1466086..1466091)
+ /locus_tag="SARI_01506"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:100122"
+ misc_feature 1466101..1466277
+ /locus_tag="SARI_01506"
+ /note="Histidine Kinase A (dimerization/phosphoacceptor)
+ domain; Histidine Kinase A dimers are formed through
+ parallel association of 2 domains creating 4-helix
+ bundles; usually these domains contain a conserved His
+ residue and are activated via...; Region: HisKA; cd00082"
+ /db_xref="CDD:119399"
+ misc_feature order(1466119..1466121,1466131..1466133,1466143..1466145,
+ 1466152..1466154,1466164..1466166,1466173..1466175,
+ 1466218..1466220,1466227..1466229,1466239..1466241,
+ 1466248..1466250,1466260..1466262)
+ /locus_tag="SARI_01506"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119399"
+ misc_feature 1466137..1466139
+ /locus_tag="SARI_01506"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:119399"
+ misc_feature 1466434..1466736
+ /locus_tag="SARI_01506"
+ /note="Histidine kinase-like ATPases; This family includes
+ several ATP-binding proteins for example: histidine
+ kinase, DNA gyrase B, topoisomerases, heat shock protein
+ HSP90, phytochrome-like ATPases and DNA mismatch repair
+ proteins; Region: HATPase_c; cd00075"
+ /db_xref="CDD:238030"
+ misc_feature order(1466452..1466454,1466464..1466466,1466473..1466475,
+ 1466536..1466538,1466542..1466544,1466548..1466550,
+ 1466554..1466559,1466638..1466649,1466695..1466697,
+ 1466701..1466703,1466716..1466721,1466725..1466727)
+ /locus_tag="SARI_01506"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature 1466464..1466466
+ /locus_tag="SARI_01506"
+ /note="Mg2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature order(1466548..1466550,1466554..1466556,1466638..1466640,
+ 1466644..1466646)
+ /locus_tag="SARI_01506"
+ /note="G-X-G motif; other site"
+ /db_xref="CDD:238030"
+ gene 1466854..1467783
+ /locus_tag="SARI_01507"
+ CDS 1466854..1467783
+ /locus_tag="SARI_01507"
+ /inference="protein motif:HMMPfam:IPR008865"
+ /inference="protein motif:HMMTigr:IPR008865"
+ /inference="similar to AA sequence:SwissProt:Q5PIB8"
+ /note="binds to DNA replication terminator sequences to
+ prevent passage of replication forks"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA replication terminus site-binding protein"
+ /protein_id="YP_001570545.1"
+ /db_xref="GI:161503433"
+ /db_xref="InterPro:IPR008865"
+ /translation="MSCYDLVERLNGTFRQIEQHLAALTDNLQQHSLLIARVFSLPQV
+ TKEAEHAPLDTIEVTQHLGKEAETLALRHYRHLFIQQQSENRSSKAAVRLPGVLCYQV
+ DNATQADLENQVQRINQLKTTFGQMVTVESGLPSAARFEWVHRYLPGLITLNAYRTLT
+ LINNPATIRFGWANKHIIKNLSRDEVLSQLKKSLSSTRSVPPWTREQWQFKLEREYQD
+ IAALPQQARLKIKRPVKVQPIARIWYKGQQKQVQHACPTPIIALINTDNGAGVPDIGG
+ LENYDADNIQHRFKPQAQPMRLIIPRLHLYVAD"
+ misc_feature 1466854..1467780
+ /locus_tag="SARI_01507"
+ /note="DNA replication terminus site-binding protein;
+ Provisional; Region: PRK02951"
+ /db_xref="CDD:235090"
+ gene complement(1467780..1469225)
+ /gene="fumC"
+ /locus_tag="SARI_01508"
+ CDS complement(1467780..1469225)
+ /gene="fumC"
+ /locus_tag="SARI_01508"
+ /inference="protein motif:FPrintScan:IPR000362"
+ /inference="protein motif:FPrintScan:IPR003031"
+ /inference="protein motif:HMMPfam:IPR000362"
+ /inference="protein motif:HMMTigr:IPR005677"
+ /inference="protein motif:ScanRegExp:IPR000362"
+ /inference="protein motif:superfamily:IPR008948"
+ /inference="similar to AA sequence:REFSEQ:YP_150640.1"
+ /note="class II family (does not require metal);
+ tetrameric enzyme; fumarase C; reversibly converts
+ (S)-malate to fumarate and water; functions in the TCA
+ cycle"
+ /codon_start=1
+ /transl_table=11
+ /product="fumarate hydratase"
+ /protein_id="YP_001570546.1"
+ /db_xref="GI:161503434"
+ /db_xref="InterPro:IPR000362"
+ /db_xref="InterPro:IPR003031"
+ /db_xref="InterPro:IPR005677"
+ /db_xref="InterPro:IPR008948"
+ /translation="MSTHDLINLSKEQVMVTVRREKDSMGAIEVPADKLWGAQTQRSL
+ EHFRISTEKMPVSLIHALALTKRAAAKVNQDLGLLAAEKASAIIQAADEVLAGKHADE
+ FPLAIWQTGSGTQSNMNMNEVLANRASEILGGVRGMERKVHPNDDVNKSQSSNDVFPT
+ AMHVAALLALRKHLIPQLSALIDTLREKSHAFADIVKIGRTHLQDATPLTLGQEISGW
+ VAMLEHNLRHIEHSLPHVAELALGGTAVGTGLNTHPEYARRVAQELATITATPFVTAP
+ NKFEALAACDALVHAHGALKGLAASLMKIANDVRWLASGPRCGIGEIAIPENEPGSSI
+ MPGKVNPTQCEAVTMLCCQVMGNDVAINMGGASGNFELNVYRPMIIHNFLQTVRLLAD
+ GMASFNQHCASGIEPNRERITQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLK
+ ASAVALGYLSDEEFDAWVRPELMVGSMTPGR"
+ misc_feature complement(1467795..1469183)
+ /gene="fumC"
+ /locus_tag="SARI_01508"
+ /note="fumarate hydratase; Reviewed; Region: fumC;
+ PRK00485"
+ /db_xref="CDD:234779"
+ misc_feature complement(1467807..1469171)
+ /gene="fumC"
+ /locus_tag="SARI_01508"
+ /note="Class II fumarases; Region: Fumarase_classII;
+ cd01362"
+ /db_xref="CDD:176465"
+ misc_feature complement(order(1468191..1468193,1468206..1468208,
+ 1468212..1468214,1468620..1468622,1468761..1468769,
+ 1468788..1468799,1468806..1468808,1468884..1468886,
+ 1468890..1468892))
+ /gene="fumC"
+ /locus_tag="SARI_01508"
+ /note="active site"
+ /db_xref="CDD:176465"
+ misc_feature complement(order(1467954..1467956,1468113..1468121,
+ 1468128..1468130,1468152..1468154,1468302..1468307,
+ 1468314..1468319,1468323..1468328,1468335..1468340,
+ 1468347..1468349,1468356..1468361,1468368..1468370,
+ 1468374..1468379,1468386..1468388,1468395..1468400,
+ 1468488..1468490,1468542..1468544,1468554..1468556,
+ 1468566..1468568,1468584..1468589,1468605..1468607,
+ 1468617..1468628))
+ /gene="fumC"
+ /locus_tag="SARI_01508"
+ /note="tetramer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:176465"
+ gene complement(1469212..1469358)
+ /locus_tag="SARI_01509"
+ CDS complement(1469212..1469358)
+ /locus_tag="SARI_01509"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570547.1"
+ /db_xref="GI:161503435"
+ /translation="MPPCGAVKFLLNQTLFCLITPQTPYPAYTVVLLSLILIRPQPCG
+ NVDT"
+ gene complement(1469361..1471007)
+ /locus_tag="SARI_01510"
+ CDS complement(1469361..1471007)
+ /locus_tag="SARI_01510"
+ /inference="protein motif:HMMPfam:IPR004646"
+ /inference="protein motif:HMMPfam:IPR004647"
+ /inference="protein motif:HMMPIR:IPR011167"
+ /inference="protein motif:HMMTigr:IPR004646"
+ /inference="protein motif:HMMTigr:IPR004647"
+ /inference="protein motif:ScanRegExp:IPR000362"
+ /inference="similar to AA sequence:REFSEQ:YP_150641.1"
+ /note="'KEGG: spt:SPA1387 3.1e-295 fumA; Fumarate
+ hydratase class I, aerobic K01676;
+ COG: COG1951 Tartrate dehydratase alpha subunit/Fumarate
+ hydratase class I, N-terminal domain;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570548.1"
+ /db_xref="GI:161503436"
+ /db_xref="InterPro:IPR000362"
+ /db_xref="InterPro:IPR004646"
+ /db_xref="InterPro:IPR004647"
+ /db_xref="InterPro:IPR011167"
+ /translation="MSNKPFFYQHPFPLKKDATEYYLLTSEHVSVAEFEGQEILKVAP
+ EALTLLARQAFHDASFMLRPAHQQQVADILRDPQASENDKYVALQFLRNSDIAAKGVL
+ PTCQDTGTAIIVGKKGQRVWTGGGDEAALARGVYNTYIEDNLRYSQNAALDMYKEVNT
+ GTNLPAQIDLYSVDGDEYKFLCIAKGGGSANKTYLYQETKALLTPGKLKNYLVDKMRT
+ LGTAACPPYHIAFVIGGTSAEANLKTVKLASAKYYDALPTEGNEHGQAFRDIELEKEL
+ LLEAQNLGLGAQFGGKYFAHDIRVIRLPRHGASCPVGMGVSCSADRNIKAKINREGIW
+ IEKLERNPGKYIPEALRQAGEGEAVRVDLNRPMSEILQQLSQYPVSTRLSLNGTIIVG
+ RDIAHAKLKERMDRGEGLPQYIKDHPIYYAGPAKTPEGYASGSLGPTTAGRMDSYVDQ
+ LQSQGGSMIMLAKGNRSQQVTDACKKHGGFYLGSIGGPAAVLAQGSIKRLECVEYPEL
+ GMEAIWKIEVEDFPAFILVDDKGNDFFQQIQTSQCARCVK"
+ misc_feature complement(1469397..1471004)
+ /locus_tag="SARI_01510"
+ /note="fumarate hydratase; Provisional; Region: PRK15389"
+ /db_xref="CDD:237955"
+ misc_feature complement(1469976..1470896)
+ /locus_tag="SARI_01510"
+ /note="Tartrate dehydratase alpha subunit/Fumarate
+ hydratase class I, N-terminal domain [Energy production
+ and conversion]; Region: TtdA; COG1951"
+ /db_xref="CDD:224862"
+ misc_feature complement(1469391..1470014)
+ /locus_tag="SARI_01510"
+ /note="Fumarase C-terminus; Region: Fumerase_C; pfam05683"
+ /db_xref="CDD:218690"
+ gene 1471207..1472382
+ /locus_tag="SARI_01511"
+ CDS 1471207..1472382
+ /locus_tag="SARI_01511"
+ /inference="protein motif:HMMPfam:IPR001250"
+ /inference="protein motif:HMMTigr:IPR001250"
+ /inference="protein motif:ScanRegExp:IPR001250"
+ /inference="protein motif:superfamily:IPR011051"
+ /inference="similar to AA sequence:SwissProt:P25081"
+ /note="'KEGG: stm:STM1467 7.1e-202 manA;
+ mannose-6-phosphate isomerase K01809;
+ COG: COG1482 Phosphomannose isomerase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="mannose-6-phosphate isomerase"
+ /protein_id="YP_001570549.1"
+ /db_xref="GI:161503437"
+ /db_xref="InterPro:IPR001250"
+ /db_xref="InterPro:IPR011051"
+ /translation="MQKLINSVQNYAWGSKTALTELYGIANPQQQPQAELWMGAHPKS
+ SSRITTANGETVSLRDVIENNKTALLGEAVANRFGELPFLFKVLCAAQPLSIQVHPNK
+ RNSEIGFAKENAAGIPMDAAKRNYKDPNHKPELVFALTPFLAMNAFREFSDIVSLLQP
+ IAGAHSAIAHFLQAPNAERLSQLFASLLNMQGEEKSRALAVLKAALNSQQGEPWQTIR
+ VISEYYPDDSGLFSPLLLNVVKLNPGEAMFLFAETPHAYLQGVALEVMANSDNVLRAG
+ LTPKYIDIPELVANVKFEPKPASELLTAPVKSGAELDFPIPVDDFAFSLHDLSLQETS
+ IGQHSAAILFCVEGEAVLRKDEQRLVLKPGESAFIGADESPVNASGTGRLARVYNKL"
+ misc_feature 1471207..1472373
+ /locus_tag="SARI_01511"
+ /note="mannose-6-phosphate isomerase; Provisional; Region:
+ PRK15131"
+ /db_xref="CDD:185085"
+ misc_feature 1471210..>1471527
+ /locus_tag="SARI_01511"
+ /note="Alpha-Mannosidase Binding Domain of Atg19/34;
+ Region: ABD; cl15429"
+ /db_xref="CDD:246961"
+ misc_feature <1471684..1472352
+ /locus_tag="SARI_01511"
+ /note="Alpha-Mannosidase Binding Domain of Atg19/34;
+ Region: ABD; cl15429"
+ /db_xref="CDD:246961"
+ gene 1472485..1473993
+ /locus_tag="SARI_01512"
+ CDS 1472485..1473993
+ /locus_tag="SARI_01512"
+ /inference="protein motif:HMMPfam:IPR010352"
+ /inference="similar to AA sequence:INSD:CAD01901.1"
+ /note="'COG: COG5339 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570550.1"
+ /db_xref="GI:161503438"
+ /db_xref="InterPro:IPR010352"
+ /translation="MKKTLVAAGVVIALGIVWTGGAWYTGKKLENHLSEMVTQANEQL
+ KRTAPEAGVELSYQNYQRGVFSSHLQLVVKPVAGADNTWLKPGQSIVLDESVSHGPFP
+ LAQLKTFNLIPSMASVKTTLVNNDAAKPLFDIAKGDAPFVINTRIGYGGDTRSDISLN
+ PLNYENAGEKVAFSGGEFQLNADKDGNVVSLSGEAQSGLVDAVNEYNQKVQLTFTNLK
+ TDGSSKLASFGERVGDQKLTLDKLSIAIEGKEMAVLEGMEIVGKSDLVNDGKTINSQL
+ DYSLNSLKVQNQDLGSGKLTLKVGQVDGEAWHQFSQQYNAQTQALLNQPDIAQNPELY
+ QQKVTEAFFSALPVLLKGDPVLTLAPLSWQNAKGETTLNLSLFLKDPATTTAQPQTLA
+ QEIDRSVKSLDAKLAIPMDMAVEFMTQIAKLEGYQQDDAEKLAKQQVQGLSAMGQMFR
+ LTTLKDNTIASSLQYANGQITLNGQKMPLEDFVGLFGMPALSVPDVPALPQQ"
+ misc_feature 1472536..1473957
+ /locus_tag="SARI_01512"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG5339"
+ /db_xref="CDD:227644"
+ misc_feature 1472536..1473930
+ /locus_tag="SARI_01512"
+ /note="Bacterial protein of unknown function (DUF945);
+ Region: DUF945; pfam06097"
+ /db_xref="CDD:218895"
+ gene complement(1474051..1475079)
+ /locus_tag="SARI_01513"
+ CDS complement(1474051..1475079)
+ /locus_tag="SARI_01513"
+ /inference="protein motif:HMMPfam:IPR000843"
+ /inference="protein motif:HMMPfam:IPR001761"
+ /inference="protein motif:HMMSmart:IPR000843"
+ /inference="protein motif:ScanRegExp:IPR000843"
+ /inference="protein motif:superfamily:IPR010982"
+ /inference="similar to AA sequence:REFSEQ:ZP_00926581.1"
+ /note="regulates malXY which are involved in
+ maltose-glucose transport"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional repressor MalI"
+ /protein_id="YP_001570551.1"
+ /db_xref="GI:161503439"
+ /db_xref="InterPro:IPR000843"
+ /db_xref="InterPro:IPR001761"
+ /db_xref="InterPro:IPR010982"
+ /translation="MAIAKKITIHDVALAAGVSVSTVSLVLSGKGRISAATGERVNAA
+ IEQLGFVRNRQASALRGGQSGVIGLIVRDLSAPFYAELTAGLTEALEAQGRMVFLLHG
+ GKDGEQLNQRFTMLLNQGVDGMVIAGAAGSSEALRAQADAQGIPVVFASRASYLDDAD
+ TVRPDNMQAAQLLTEYLIRQGHQRIAWLGGQSASLTRAERVGGYCATLLKYGLPFHSE
+ WVVECASSQKQAAESITALLRYNPTISAVVCYNETIAMGAWFGLLRAGRQSGESGVDR
+ YFEQQVSLAAFADVAENALDDLPIIWASTPAREIGYTLAERILQRIAHDEHHVRSQTI
+ AARLVTQK"
+ misc_feature complement(1474054..1475079)
+ /locus_tag="SARI_01513"
+ /note="DNA-binding transcriptional repressor MalI;
+ Provisional; Region: PRK10014"
+ /db_xref="CDD:182193"
+ misc_feature complement(1474897..>1474986)
+ /locus_tag="SARI_01513"
+ /note="Helix-turn-helix (HTH) DNA binding domain of the
+ LacI family of transcriptional regulators; Region:
+ HTH_LacI; cd01392"
+ /db_xref="CDD:143331"
+ misc_feature complement(order(1474900..1474905,1474909..1474914,
+ 1474921..1474923,1474930..1474932,1474969..1474971,
+ 1474978..1474983))
+ /locus_tag="SARI_01513"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:143331"
+ misc_feature complement(1474903..1474932)
+ /locus_tag="SARI_01513"
+ /note="domain linker motif; other site"
+ /db_xref="CDD:143331"
+ misc_feature complement(1474063..1474884)
+ /locus_tag="SARI_01513"
+ /note="Ligand-binding domain of MalI, a transcription
+ regulator of the maltose system of Escherichia coli and
+ its close homologs from other bacteria; Region:
+ PBP1_MalI_like; cd06289"
+ /db_xref="CDD:107284"
+ misc_feature complement(order(1474288..1474293,1474300..1474302,
+ 1474312..1474314,1474396..1474398,1474720..1474728,
+ 1474735..1474737,1474744..1474746,1474777..1474779,
+ 1474783..1474797,1474816..1474821,1474825..1474830,
+ 1474837..1474845,1474882..1474884))
+ /locus_tag="SARI_01513"
+ /note="putative dimerization interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:107284"
+ misc_feature complement(order(1474165..1474167,1474216..1474218,
+ 1474405..1474407,1474480..1474482,1474588..1474590,
+ 1474627..1474629,1474699..1474701,1474834..1474836,
+ 1474843..1474848))
+ /locus_tag="SARI_01513"
+ /note="putative ligand binding site [chemical binding];
+ other site"
+ /db_xref="CDD:107284"
+ gene 1475252..1476844
+ /locus_tag="SARI_01514"
+ CDS 1475252..1476844
+ /locus_tag="SARI_01514"
+ /inference="protein motif:HMMPfam:IPR001996"
+ /inference="protein motif:HMMPfam:IPR003352"
+ /inference="protein motif:HMMTigr:IPR004719"
+ /inference="protein motif:HMMTigr:IPR011301"
+ /inference="protein motif:HMMTigr:IPR011535"
+ /inference="protein motif:ScanRegExp:IPR001996"
+ /inference="similar to AA sequence:REFSEQ:YP_669473.1"
+ /note="phosphoenolpyruvate-dependent sugar
+ phosphotransferase system (PTS); catalyzes the
+ phosphorylation of maltose and glucose concomitant with
+ their translocation across the cell membrane; component
+ IIB catalyzes the phosphorylation of the sugar molecule;
+ IIC forms the translocation channel and contains the
+ substrate specific binding site"
+ /codon_start=1
+ /transl_table=11
+ /product="bifunctional PTS system maltose and
+ glucose-specific transporter subunits IICB"
+ /protein_id="YP_001570552.1"
+ /db_xref="GI:161503440"
+ /db_xref="InterPro:IPR001996"
+ /db_xref="InterPro:IPR003352"
+ /db_xref="InterPro:IPR004719"
+ /db_xref="InterPro:IPR011301"
+ /db_xref="InterPro:IPR011535"
+ /translation="MTTKTTPKITLWEFFQQLGKTFMLPVALLSFCGIMLGIGSSLSS
+ HDVITLLPMLGNPLLQAIFTWMSKVGSFAFSFLPVMFCIAIPLGLARENKGVAAFAGF
+ VGYAVMNLAVNFWLTAKGILPTTDAAVLKANNVQNILGIPSIDTGILGAVIAGIIVWM
+ LHERFHTIRLPDALAFFGGTRFVPIVSAVVMGLVGLVIPLVWPIFAMGISGLGHIINS
+ AGDFGPMIFGTGERLLLPFGLHHILVALIRFTEAGGTQEVCGHTVSGALTIFQAQLSC
+ PTTHGFSESATRFLSQGKMPAFLGGLPGAALAMYHCARPENRPKIKGLLISGLIACVV
+ GGTTEPLEFLFLFVAPVLYVIHALLTGLGFTIMAILGVTIGNTDGNIIDFVVFGILHG
+ LSTKWYLVPVVAVIWFAVYYIIFRFAITRFNLKTPGREAEIATSIEKAIAGAPGKSGY
+ NVPAILAALGGTENIVSLDNCITRLRLSVKDMALVDIQALKDNRAIGVVQLNQHNLQV
+ VIGPQVQSVKDEMVGLMNTVQA"
+ misc_feature 1475252..1476841
+ /locus_tag="SARI_01514"
+ /note="bifunctional PTS system maltose and
+ glucose-specific transporter subunits IICB; Provisional;
+ Region: PRK10110"
+ /db_xref="CDD:182245"
+ misc_feature 1475459..1476367
+ /locus_tag="SARI_01514"
+ /note="PTS system, maltose and glucose-specific subfamily,
+ IIC component; Region: pts-Glc; TIGR00852"
+ /db_xref="CDD:233151"
+ misc_feature 1476605..1476826
+ /locus_tag="SARI_01514"
+ /note="PTS_IIB, PTS system, glucose/sucrose specific IIB
+ subunit. The bacterial phosphoenolpyruvate: sugar
+ phosphotransferase system (PTS) is a multi-protein system
+ involved in the regulation of a variety of metabolic and
+ transcriptional processes. This family...; Region:
+ PTS_IIB_glc; cd00212"
+ /db_xref="CDD:238130"
+ misc_feature 1476659..1476679
+ /locus_tag="SARI_01514"
+ /note="active site turn [active]"
+ /db_xref="CDD:238130"
+ misc_feature 1476662..1476664
+ /locus_tag="SARI_01514"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238130"
+ gene 1476854..1478026
+ /locus_tag="SARI_01515"
+ CDS 1476854..1478026
+ /locus_tag="SARI_01515"
+ /inference="protein motif:HMMPfam:IPR004839"
+ /inference="similar to AA sequence:REFSEQ:NP_288058.1"
+ /note="'KEGG: ece:Z2627 1.9e-176 malY; enzyme that may
+ degrade or block biosynthesis of endogenous mal inducer,
+ probably aminotrasferase K01760;
+ COG: COG1168 Bifunctional PLP-dependent enzyme with
+ beta-cystaTHIonase and maltose regulon repressor
+ activities;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570553.1"
+ /db_xref="GI:161503441"
+ /db_xref="InterPro:IPR004839"
+ /translation="MFDFSQEVDRHGTWCTQWDYVADRFGEADLLPFTISDMDFATAP
+ CILEALNQRLSHSVLGYSRWKNEAFLGAISHWFATRHQTTIDAHSLVYGPSVIYMASE
+ LIRQWSDQGDGVVVHTPAYDAFYKAIEGNHRIVTPVPLEKEGNAWYCDMAKLEAALAR
+ PESKILLLCSPQNPTGKVWTHDELETMSALCERHGVRVISDEIHMDMVWGSQPHIPWS
+ NVARGDWALVSSGSKSFNIPALTGAYGVIENSESRERYLSALKGRDGLSSPAVLSLTA
+ HIAAYQHGAPWLDALRAYLAENMRYIEQRLNDAFPALNWQAPQSTYLAWIDLRQLGID
+ DQKLQDTLIHQEKVAIMPGDTYGAEGRGFVRLNAGCPHLKLEKGVYGLINAIRTVR"
+ misc_feature 1476854..1478023
+ /locus_tag="SARI_01515"
+ /note="Bifunctional PLP-dependent enzyme with
+ beta-cystathionase and maltose regulon repressor
+ activities [Amino acid transport and metabolism]; Region:
+ MalY; COG1168"
+ /db_xref="CDD:224090"
+ misc_feature 1476944..1477990
+ /locus_tag="SARI_01515"
+ /note="Aspartate aminotransferase family. This family
+ belongs to pyridoxal phosphate (PLP)-dependent aspartate
+ aminotransferase superfamily (fold I). Pyridoxal phosphate
+ combines with an alpha-amino acid to form a compound
+ called a Schiff base or aldimine...; Region: AAT_like;
+ cd00609"
+ /db_xref="CDD:99734"
+ misc_feature order(1477136..1477144,1477214..1477216,1477370..1477372,
+ 1477463..1477465,1477541..1477543,1477547..1477552,
+ 1477574..1477576)
+ /locus_tag="SARI_01515"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:99734"
+ misc_feature order(1477145..1477147,1477244..1477246,1477442..1477444,
+ 1477568..1477576,1477670..1477672,1477679..1477681)
+ /locus_tag="SARI_01515"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99734"
+ misc_feature 1477550..1477552
+ /locus_tag="SARI_01515"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:99734"
+ gene complement(1478055..1478402)
+ /locus_tag="SARI_01516"
+ CDS complement(1478055..1478402)
+ /locus_tag="SARI_01516"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570554.1"
+ /db_xref="GI:161503442"
+ /translation="MWNQRFQRLGGKGDIELATKIQNSLGANVAIKVAVDVSQRKRNI
+ NHGRTQFLIKERTIILQIGNPLDILEKRSHYVVKRGMSGIFIARAREKFCIILLNAPP
+ VSSQGALLSSHLR"
+ gene 1478265..1479266
+ /locus_tag="SARI_01517"
+ CDS 1478265..1479266
+ /locus_tag="SARI_01517"
+ /inference="protein motif:HMMPanther:IPR001365"
+ /inference="protein motif:HMMPfam:IPR001365"
+ /inference="protein motif:HMMTigr:IPR006330"
+ /inference="protein motif:ScanRegExp:IPR006650"
+ /inference="similar to AA sequence:ScanRegExp:IPR006650"
+ /note="'KEGG: stt:t1331 1.8e-141 add; adenosine deaminase
+ K01488;
+ COG: COG1816 Adenosine deaminase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="adenosine deaminase"
+ /protein_id="YP_001570555.2"
+ /db_xref="GI:448236232"
+ /db_xref="InterPro:IPR001365"
+ /db_xref="InterPro:IPR006330"
+ /db_xref="InterPro:IPR006650"
+ /translation="MIDITLPLTDIHRHLDGNIRAQTILDLGRQFNIALPAQTLETLI
+ PHVQVTSTEPDLVSFLSKLDWGVKVLASLDACRRVAFENIEDAARNGLHYVELRFSPG
+ YMAMAHQLPVTGVVEAVIDGVRDGCNTFGVEARLIGIMSRTFGEAACSQELNALLAHR
+ EKITALDLAGDELGFPGSLFLSHFNRARDAGWHITVHAGEAAGPESIWQAIRELGAER
+ IGHGVKAVEDRALMDFLAQQRIGIESCLTSNIQTSTVASLADHPLKTFLEHGVLASLN
+ TDDPAVQGVDIIHEYHIAAPAAGLSREQIRQAQINGLEIAFLSDTEKRALREKVAAA"
+ misc_feature 1478265..1479263
+ /locus_tag="SARI_01517"
+ /note="Adenosine deaminase [Nucleotide transport and
+ metabolism]; Region: Add; COG1816"
+ /db_xref="CDD:224729"
+ misc_feature 1478280..1479254
+ /locus_tag="SARI_01517"
+ /note="Adenosine deaminase (ADA) is a monomeric zinc
+ dependent enzyme which catalyzes the irreversible
+ hydrolytic deamination of both adenosine, as well as
+ desoxyadenosine, to ammonia and inosine or desoxyinosine,
+ respectively. ADA plays an important role in...; Region:
+ ADA; cd01320"
+ /db_xref="CDD:238645"
+ misc_feature order(1478298..1478300,1478304..1478306,1478853..1478855,
+ 1478862..1478864,1478925..1478927,1479096..1479101)
+ /locus_tag="SARI_01517"
+ /note="active site"
+ /db_xref="CDD:238645"
+ misc_feature order(1478304..1478306,1478310..1478312,1478772..1478774,
+ 1478862..1478864,1479096..1479101)
+ /locus_tag="SARI_01517"
+ /note="purine riboside binding site [chemical binding];
+ other site"
+ /db_xref="CDD:238645"
+ gene complement(1479341..1480381)
+ /locus_tag="SARI_01518"
+ CDS complement(1479341..1480381)
+ /locus_tag="SARI_01518"
+ /inference="protein motif:HMMPfam:IPR000683"
+ /inference="protein motif:HMMPfam:IPR004104"
+ /inference="similar to AA sequence:INSD:CAD01905.1"
+ /note="'KEGG: eci:UTI89_C1812 6.2e-171 ydgJ; hypothetical
+ oxidoreductase YdgJ;
+ COG: COG0673 Predicted dehydrogenases and related
+ proteins;
+ Psort location: cytoskeletal, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative oxidoreductase"
+ /protein_id="YP_001570556.1"
+ /db_xref="GI:161503444"
+ /db_xref="InterPro:IPR000683"
+ /db_xref="InterPro:IPR004104"
+ /translation="MNDRIRVGLIGYGYASKTFHAPLIMGTPGLELATISSSDETKVK
+ ADWPKVSVVSEPRHLFSDPHIDLIVIPTPNDTHFPLAKAALEAGKHVVVDKPFTVTLS
+ QARELDALARSTGRVLSVFHNRRWDSDFLTLKALLANGVLGEVSLFESHFDRFRPQVR
+ DRWREQGGPGSGIWYDLAPHLLDQAVQLFGLPVSMAVDLAQLRPGAQSTDYFHAILSY
+ PQRRVILHGTMLAAAESARYIVHGSRGSYVKYGLDPQEERLKNGERLPQEDWGYDMRD
+ GVLTLVEGETRKEKNWLTLPGNYPAYYAAIRDALTGNGENPVPASQAIQIMELIELGI
+ ESAKHRATLCLA"
+ misc_feature complement(1479344..1480381)
+ /locus_tag="SARI_01518"
+ /note="putative oxidoreductase; Provisional; Region:
+ PRK11579"
+ /db_xref="CDD:183212"
+ misc_feature complement(1480016..1480369)
+ /locus_tag="SARI_01518"
+ /note="Oxidoreductase family, NAD-binding Rossmann fold;
+ Region: GFO_IDH_MocA; pfam01408"
+ /db_xref="CDD:201778"
+ misc_feature complement(1479659..1479982)
+ /locus_tag="SARI_01518"
+ /note="Oxidoreductase family, C-terminal alpha/beta
+ domain; Region: GFO_IDH_MocA_C; pfam02894"
+ /db_xref="CDD:217272"
+ gene 1480501..1480722
+ /locus_tag="SARI_01519"
+ CDS 1480501..1480722
+ /locus_tag="SARI_01519"
+ /inference="similar to AA sequence:INSD:ABG69576.1"
+ /note="'Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570557.1"
+ /db_xref="GI:161503445"
+ /translation="MKSFPFLLPAVRQESNIYLLCFMDQLKQMSSIMNRLIELTGWIV
+ LVISVILLGIANHIDNYQPPEPVASVQKK"
+ gene 1481019..1481234
+ /locus_tag="SARI_01520"
+ CDS 1481019..1481234
+ /locus_tag="SARI_01520"
+ /inference="protein motif:HMMPfam:IPR007985"
+ /inference="similar to AA sequence:INSD:AAL20383.1"
+ /note="'YdgT; in E. coli, when complexed with H-NS or StpA
+ binds a 26 base-pair DNA sequence of oriC; seems to play a
+ role in optimizing the activity of oriC; non-essential;
+ Hha protein paralog; in an hha mutant background, cnu is
+ overexpressed and can compensate hha-induced phenotypes'"
+ /codon_start=1
+ /transl_table=11
+ /product="oriC-binding nucleoid-associated protein"
+ /protein_id="YP_001570558.1"
+ /db_xref="GI:161503446"
+ /db_xref="InterPro:IPR007985"
+ /translation="MTVQDYLLKFRKISSLESLEKLFDHLNYTLTDDRDIVNMYRAAD
+ HRRAELVSGGRLFDVGQVPQSVWRYVQ"
+ misc_feature 1481019..1481231
+ /locus_tag="SARI_01520"
+ /note="oriC-binding nucleoid-associated protein;
+ Provisional; Region: PRK10391"
+ /db_xref="CDD:182426"
+ gene 1481281..1481763
+ /locus_tag="SARI_01521"
+ CDS 1481281..1481763
+ /locus_tag="SARI_01521"
+ /inference="similar to AA sequence:INSD:AAL20382.1"
+ /note="'COG: NOG08686 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570559.1"
+ /db_xref="GI:161503447"
+ /translation="MSGMTVNARNPGEDMTTTPPQRIGGWLLGPLAWLLVALLSASLA
+ LLLYVMALATPQTLKTLSGQETGNILLWGISFITAIAMWYYTLWLTIAFFKRRRCVPK
+ HYIIWLLVSVLLAVKAFAFSPVSDAFAVRQLLFPLLATALIVPYLKRSARVKTTFVNP
+ "
+ misc_feature <1481440..1481757
+ /locus_tag="SARI_01521"
+ /note="Protein of unknown function (DUF2569); Region:
+ DUF2569; pfam10754"
+ /db_xref="CDD:220870"
+ gene 1481840..1482421
+ /locus_tag="SARI_01522"
+ CDS 1481840..1482421
+ /locus_tag="SARI_01522"
+ /inference="protein motif:HMMPfam:IPR003667"
+ /inference="protein motif:HMMTigr:IPR011293"
+ /inference="similar to AA sequence:INSD:AAV77335.1"
+ /note="'KEGG: vfi:VF0935 2.6e-78 Na(+)-translocating
+ NADH-quinone reductase subunit E K03617;
+ COG: COG4657 Predicted NADH:ubiquinone oxidoreductase,
+ subunit RnfA;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="Na(+)-translocating NADH-quinone reductase
+ subunit E"
+ /protein_id="YP_001570560.1"
+ /db_xref="GI:161503448"
+ /db_xref="InterPro:IPR003667"
+ /db_xref="InterPro:IPR011293"
+ /translation="MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLA
+ TTFVMTLASICAWLIDTWILIPLDLVYLRTLSFILVIAVVVQFTEMVVRKTSPALYRL
+ LGIFLPLITTNCAVLGVALLNINLGHHFLQSALYGFSAAVGFSLVMVLFAAIRERLAV
+ ADVPAPFRGNAIALITAGLMSLAFMGFSGLVKL"
+ misc_feature 1481840..1482418
+ /locus_tag="SARI_01522"
+ /note="electron transport complex protein RsxA;
+ Provisional; Region: PRK05151"
+ /db_xref="CDD:235352"
+ gene complement(1482232..1482900)
+ /locus_tag="SARI_01524"
+ CDS complement(1482232..1482900)
+ /locus_tag="SARI_01524"
+ /inference="similar to AA sequence:INSD:EAZ49444.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570561.1"
+ /db_xref="GI:161503450"
+ /translation="MRRTRIDAQITAGTEIAHDRVHGARCANDSVNRTGLNAFCATNA
+ VIFINNRQHTHWGGLLFFSIAWLRLYVQQIRNFQHDGFTAGRATINFLALETHGFGVG
+ AASGIAALATLALRQNRIDFFNNRIIFNRESAGGITQNGAEHQTQKGQGANGNPDSIH
+ YNFTKPLKPIKAKDINPAVINAIALPRKGAGTSATARRSRMAANRTITNEKPTAAENP
+ YNAD"
+ gene 1482421..1482999
+ /locus_tag="SARI_01523"
+ CDS 1482421..1482999
+ /locus_tag="SARI_01523"
+ /inference="protein motif:HMMPfam:IPR001450"
+ /inference="protein motif:HMMPfam:IPR007202"
+ /inference="protein motif:HMMTigr:IPR010207"
+ /inference="protein motif:ScanRegExp:IPR001450"
+ /inference="similar to AA sequence:REFSEQ:NP_460421.1"
+ /note="part of membrane-bound complex thought to be
+ involved in electron transport to nitrogen"
+ /codon_start=1
+ /transl_table=11
+ /product="electron transport complex protein RnfB"
+ /protein_id="YP_001570562.1"
+ /db_xref="GI:161503449"
+ /db_xref="InterPro:IPR001450"
+ /db_xref="InterPro:IPR007202"
+ /db_xref="InterPro:IPR010207"
+ /translation="MNTIWIAVGALTFLGLVFGAILGYASRRFAVEDDPVVEKIDAIL
+ PQSQCGQCGYPGCRPYAEAVGLQGEKINRCAPGGEAVMLKIADLLNVEPQPCDAEEQQ
+ AAPVRMLAVIDENHCIGCTKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTH
+ CIELRPVNETPDSWKWDLNTIPVRIIPVEQHA"
+ misc_feature 1482421..1482996
+ /locus_tag="SARI_01523"
+ /note="electron transport complex protein RnfB;
+ Provisional; Region: PRK05113"
+ /db_xref="CDD:235347"
+ misc_feature 1482547..1482651
+ /locus_tag="SARI_01523"
+ /note="Putative Fe-S cluster; Region: FeS; cl17515"
+ /db_xref="CDD:248069"
+ misc_feature 1482748..1482816
+ /locus_tag="SARI_01523"
+ /note="4Fe-4S binding domain; Region: Fer4; pfam00037"
+ /db_xref="CDD:215671"
+ gene 1482992..1485013
+ /locus_tag="SARI_01525"
+ CDS 1482992..1485013
+ /locus_tag="SARI_01525"
+ /inference="protein motif:Gene3D:IPR012285"
+ /inference="protein motif:HMMPfam:IPR001450"
+ /inference="protein motif:HMMPfam:IPR011538"
+ /inference="protein motif:HMMTigr:IPR010208"
+ /inference="protein motif:ScanRegExp:IPR001450"
+ /inference="protein motif:superfamily:IPR009051"
+ /inference="protein motif:superfamily:IPR011054"
+ /note="part of membrane-bound complex thought to be
+ involved in electron transport to nitrogen"
+ /codon_start=1
+ /transl_table=11
+ /product="electron transport complex protein RnfC"
+ /protein_id="YP_001570563.1"
+ /db_xref="GI:161503451"
+ /db_xref="InterPro:IPR001450"
+ /db_xref="InterPro:IPR009051"
+ /db_xref="InterPro:IPR010208"
+ /db_xref="InterPro:IPR011054"
+ /db_xref="InterPro:IPR011538"
+ /db_xref="InterPro:IPR012285"
+ /translation="MLKLFSAFRKDKIWDFDGGIHPPEMKTQSNGTPLRQIPLAPRFV
+ IPLKQHIGAEGELCVSVGDRVLRGQALTHGRGKMLPVHAPTSGTVIAVAPHSTAHPSA
+ LAELSVIIDADGEDRWIEREGWSDYRAHSREALIERIHQYGVAGLGGAGFPTGVKLQG
+ GIDKITTLIINAAECEPYITADDRLMQDCAAQIVEGIRILAYILQPREVLIGIEDNKP
+ QAISMLRAVLADAHDISLRVIPTKYPSGGAKQLTQILTGKQVPHGGRSSDIGVLMQNV
+ GTAYAVKRAVVDGEPITERVVTLTGEAVSRPGNIWARLGTPVRHLLNNAGFCPSADQM
+ VIMGGPLMGFTLPWLDVPVVKITNCLLAPSATEMGAPQEETSCIRCSACADACPADLL
+ PQQLYWFSKGQQHDKATAHHIADCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEE
+ KRAAEAKARFEARQARLEREKAARLARHKSAAVQPAAKDQDAIAAALARVKEKQAQAT
+ QPVIIQAGSLPDNSAAIAAREARKAQARAKQAGHPMADSATSGDDPRKAAVEAAVARA
+ KARKQEQQAISEAAEPVDPRKAAVEAAIARAKARKQEQQAVSEAAEPVDPRKAAVEAA
+ IARAKARKQEQQAVSVPVEPVDPRKAAVAAAIARVQAKKAAQQQVVNEE"
+ misc_feature 1483022..1484557
+ /locus_tag="SARI_01525"
+ /note="Predicted NADH:ubiquinone oxidoreductase, subunit
+ RnfC [Energy production and conversion]; Region: RnfC;
+ COG4656"
+ /db_xref="CDD:227003"
+ misc_feature 1483877..1484023
+ /locus_tag="SARI_01525"
+ /note="SLBB domain; Region: SLBB; pfam10531"
+ /db_xref="CDD:220798"
+ misc_feature <1484120..>1484290
+ /locus_tag="SARI_01525"
+ /note="The HCP family of iron-sulfur proteins includes
+ hybrid cluster protein (HCP), acetyl-CoA synthase (ACS),
+ and carbon monoxide dehydrogenase (CODH), all of which
+ contain [Fe4-S4] metal clusters at their active sites.
+ These proteins have a conserved...; Region: HCP_like;
+ cl14655"
+ /db_xref="CDD:246686"
+ gene 1485014..1486072
+ /gene="rnfD"
+ /locus_tag="SARI_01526"
+ CDS 1485014..1486072
+ /gene="rnfD"
+ /locus_tag="SARI_01526"
+ /inference="protein motif:HMMPfam:IPR004338"
+ /inference="protein motif:HMMTigr:IPR011303"
+ /inference="similar to AA sequence:REFSEQ:NP_460419.1"
+ /note="RnfD; RsxD; required for nitrogen fixation in
+ Rhodobacter capsulatus; part of a membrane-bound complex
+ thought to be involved in electron transport to
+ nitrogenase; in Escherichia coli this gene is part of a
+ cluster controlling SoxR-mediated induction of the SoxS
+ transcription factor in the absence of oxidizing agents"
+ /codon_start=1
+ /transl_table=11
+ /product="electron transport complex protein RnfD"
+ /protein_id="YP_001570564.1"
+ /db_xref="GI:161503452"
+ /db_xref="InterPro:IPR004338"
+ /db_xref="InterPro:IPR011303"
+ /translation="MVFRIASSPYTHNQRQTSRIMLLVLIAALPGVAAQTWFFGWGTL
+ FQIVLAAVTALFAEAIVLSLRKQSIASRLKDYSALLTGLLLAVSIPPLAPWWMIVLGT
+ GFAIIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPYEIAATTPDMLDTLR
+ MIFTGHTASGGDLTLLRIGIDGISQATPLDTFKTSLRAGHSVKQIMQYPIYSGVLAGV
+ GWQWVNLAWLVGGVFLLWQKTIRWHIPVSFLVTLALCATLGWLFSPGTLASPQLHLLS
+ GATMLGAFFILTDPVTASTTNRGRLIFGALAGVLVWLIRSFGGYPDGVAFAVLLANIT
+ VPLIDYYTRPRVYGHRKG"
+ misc_feature 1485017..1486066
+ /gene="rnfD"
+ /locus_tag="SARI_01526"
+ /note="electron transport complex protein RnfD; Reviewed;
+ Region: rnfD; PRK00816"
+ /db_xref="CDD:234844"
+ unsure 1485947..1485965
+ /gene="rnfD"
+ /locus_tag="SARI_01526"
+ /note="Sequence derived from one plasmid subclone"
+ gene 1486076..1486696
+ /locus_tag="SARI_01527"
+ CDS 1486076..1486696
+ /locus_tag="SARI_01527"
+ /inference="protein motif:HMMPfam:IPR007329"
+ /inference="protein motif:HMMPIR:IPR010209"
+ /inference="protein motif:HMMTigr:IPR010209"
+ /inference="similar to AA sequence:REFSEQ:NP_456075.1"
+ /note="part of membrane-bound complex hought to be
+ involved in electron transport to nitrogen"
+ /codon_start=1
+ /transl_table=11
+ /product="electron transport complex protein RnfG"
+ /protein_id="YP_001570565.1"
+ /db_xref="GI:161503453"
+ /db_xref="InterPro:IPR007329"
+ /db_xref="InterPro:IPR010209"
+ /translation="MLKTIRKHGITLALFAAGSTGLTAVINQMTKSTIHEQALQQQHA
+ LFDQVLPPDRYNNNLQESCYLVDAPALGKGIHRVFIARKDDTPVAVIMEATAPDGYSG
+ AIRLIVGADFNGTILGTRVTEHHETPGLGDKIERRLSDWITHFSGKTISGENDTHWAV
+ KKDGGDFDQFTGATITPRAVVNAVKRAGLYAESLPAQLPHLTACGE"
+ misc_feature 1486088..1486693
+ /locus_tag="SARI_01527"
+ /note="electron transport complex protein RnfG; Validated;
+ Region: PRK01908"
+ /db_xref="CDD:179350"
+ gene 1486699..1487391
+ /locus_tag="SARI_01528"
+ CDS 1486699..1487391
+ /locus_tag="SARI_01528"
+ /inference="protein motif:HMMPfam:IPR003667"
+ /inference="protein motif:HMMTigr:IPR010968"
+ /inference="similar to AA sequence:INSD:AAL20376.1"
+ /note="in Excherichia coli RsxABCDEG reduces SoxR which
+ turns off induction of SoxS transcription factor in the
+ absence of oxidizing agents; similar to the rnfABCDGE
+ operon in Rhodobacter capsulatus involved in transferring
+ electrons to nitrogenase"
+ /codon_start=1
+ /transl_table=11
+ /product="electron transport complex RsxE subunit"
+ /protein_id="YP_001570566.1"
+ /db_xref="GI:161503454"
+ /db_xref="InterPro:IPR003667"
+ /db_xref="InterPro:IPR010968"
+ /translation="MSEIKDIVVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLA
+ TTLVLTLTNLTVSALRRWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFI
+ PLIVTNCIVVGRAEAFAAKKGPWLSALDGFSIGMGATGAMFVLGSLREILGNGTLFDG
+ ADSLLGSWAKVLRVEIFHTDSPFLLAMLPPGAFIGLGLMLAVKYLIDEKMKKRRAVTA
+ PSAVPAGETGKV"
+ misc_feature 1486699..1487388
+ /locus_tag="SARI_01528"
+ /note="electron transport complex RsxE subunit;
+ Provisional; Region: PRK12405"
+ /db_xref="CDD:237091"
+ gene 1487391..1488026
+ /locus_tag="SARI_01529"
+ CDS 1487391..1488026
+ /locus_tag="SARI_01529"
+ /inference="protein motif:HMMPfam:IPR000445"
+ /inference="protein motif:HMMPfam:IPR003265"
+ /inference="protein motif:HMMSmart:IPR003265"
+ /inference="protein motif:HMMSmart:IPR003651"
+ /inference="protein motif:HMMTigr:IPR005759"
+ /inference="protein motif:ScanRegExp:IPR004035"
+ /inference="protein motif:ScanRegExp:IPR004036"
+ /inference="protein motif:superfamily:IPR011257"
+ /inference="similar to AA sequence:REFSEQ:NP_460416.1"
+ /note="'DNA-(apurinic or apyrimidinic site) lyase; has
+ apurinic or apyrimidinic endonuclease activity and DNA
+ N-glycosylase activity; removed damaged DNA at cytosines,
+ thymines and guanines'"
+ /codon_start=1
+ /transl_table=11
+ /product="endonuclease III"
+ /protein_id="YP_001570567.1"
+ /db_xref="GI:161503455"
+ /db_xref="InterPro:IPR000445"
+ /db_xref="InterPro:IPR003265"
+ /db_xref="InterPro:IPR003651"
+ /db_xref="InterPro:IPR004035"
+ /db_xref="InterPro:IPR004036"
+ /db_xref="InterPro:IPR005759"
+ /db_xref="InterPro:IPR011257"
+ /translation="MNKAKRLEILTRLRDNNPHPTTELNFTSPFELLIAVLLSAQATD
+ VSVNKATAKLYPVANTPSAMLELGVEGVKSYIKTIGLFNSKAENVIKTCRILLEKHNG
+ EVPEDRAALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVE
+ EKLLKVVPSEFKVDCHHWLILHGRYTCIARKPRCGSCLIEDLCEYKEKVDI"
+ misc_feature 1487391..1488023
+ /locus_tag="SARI_01529"
+ /note="endonuclease III; Provisional; Region: PRK10702"
+ /db_xref="CDD:182661"
+ misc_feature 1487478..1487939
+ /locus_tag="SARI_01529"
+ /note="endonuclease III; includes endonuclease III
+ (DNA-(apurinic or apyrimidinic site) lyase), alkylbase DNA
+ glycosidases (Alka-family) and other DNA glycosidases;
+ Region: ENDO3c; cd00056"
+ /db_xref="CDD:238013"
+ misc_feature order(1487511..1487519,1487526..1487528,1487643..1487645)
+ /locus_tag="SARI_01529"
+ /note="minor groove reading motif; other site"
+ /db_xref="CDD:238013"
+ misc_feature 1487730..1487753
+ /locus_tag="SARI_01529"
+ /note="helix-hairpin-helix signature motif; other site"
+ /db_xref="CDD:238013"
+ misc_feature order(1487760..1487762,1487916..1487918,1487928..1487930)
+ /locus_tag="SARI_01529"
+ /note="substrate binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:238013"
+ misc_feature 1487802..1487804
+ /locus_tag="SARI_01529"
+ /note="active site"
+ /db_xref="CDD:238013"
+ misc_feature 1487946..1488008
+ /locus_tag="SARI_01529"
+ /note="iron-sulpphur binding domain in DNA-(apurinic or
+ apyrimidinic site) lyase (subfamily of ENDO3); Region:
+ FES; smart00525"
+ /db_xref="CDD:197771"
+ unsure 1488019..1488523
+ /note="Sequence derived from one plasmid subclone"
+ gene 1488626..1490131
+ /gene="tppB"
+ /locus_tag="SARI_01530"
+ CDS 1488626..1490131
+ /gene="tppB"
+ /locus_tag="SARI_01530"
+ /inference="protein motif:HMMPanther:IPR000109"
+ /inference="protein motif:HMMPanther:IPR005279"
+ /inference="protein motif:HMMPfam:IPR000109"
+ /inference="protein motif:HMMTigr:IPR005279"
+ /inference="protein motif:ScanRegExp:IPR000109"
+ /inference="protein motif:ScanRegExp:IPR000560"
+ /inference="similar to AA sequence:INSD:AAL20374.1"
+ /note="mutations in this gene confer resistance to the
+ toxic peptide alafosfalin in Salmonella typhimurium;
+ member of proton-dependent oligopeptide transport (POT)
+ system family; in Escherichia coli this gene is regulated
+ by OmpR although not via osmoregulation"
+ /codon_start=1
+ /transl_table=11
+ /product="putative tripeptide transporter permease"
+ /protein_id="YP_001570568.1"
+ /db_xref="GI:161503456"
+ /db_xref="InterPro:IPR000109"
+ /db_xref="InterPro:IPR000560"
+ /db_xref="InterPro:IPR005279"
+ /translation="MSTANNKPTESVSLNAFKQPKAFYLIFSIELWERFGYYGLQGIM
+ AVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKILGTKRVIMLGAVVLAIGY
+ ALVAWSGHDAGIVYMGMAAIAVGNGLFKANPSSLLSTCYAKDDPRLDGAFTMYYMSVN
+ IGSFFSMLATPWLAARYGWSTAFALSVVGMLITVVNFAFCQRWVKSYGSKPDFEPLNF
+ RNLLLTIVGIVVLIAVATWLLHNQDIARMALGVIALGIVIIFGKEAVSMHGAARRKMI
+ VAFILMLQAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAFEPEQYQALNPFWIIIGSP
+ ILATIYNKMGDTLPMPMKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVSWLIASYGLQ
+ SIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGANIIGGYVANMMAVPSDVTDP
+ LMSLEVYGRVFMQIGVATAVIAVLMLLTAPKLNRMTQDDDTTEKGSKAATV"
+ misc_feature 1488626..1490095
+ /gene="tppB"
+ /locus_tag="SARI_01530"
+ /note="Dipeptide/tripeptide permease [Amino acid transport
+ and metabolism]; Region: PTR2; COG3104"
+ /db_xref="CDD:225646"
+ misc_feature 1488692..>1489237
+ /gene="tppB"
+ /locus_tag="SARI_01530"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature order(1488734..1488736,1488743..1488751,1488755..1488757,
+ 1488761..1488763,1488812..1488814,1488821..1488826,
+ 1488833..1488835,1488845..1488850,1488854..1488859,
+ 1489001..1489006,1489013..1489018,1489025..1489030,
+ 1489037..1489039,1489079..1489084,1489091..1489096,
+ 1489112..1489114)
+ /gene="tppB"
+ /locus_tag="SARI_01530"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ misc_feature 1488887..1489918
+ /gene="tppB"
+ /locus_tag="SARI_01530"
+ /note="POT family; Region: PTR2; pfam00854"
+ /db_xref="CDD:216153"
+ unsure 1488682..1489432
+ /gene="tppB"
+ /locus_tag="SARI_01530"
+ /note="Sequence derived from one plasmid subclone"
+ gene 1490236..1490841
+ /locus_tag="SARI_01531"
+ CDS 1490236..1490841
+ /locus_tag="SARI_01531"
+ /inference="protein motif:Gene3D:IPR012335"
+ /inference="protein motif:HMMPfam:IPR004045"
+ /inference="protein motif:HMMPfam:IPR004046"
+ /inference="protein motif:superfamily:IPR010987"
+ /inference="protein motif:superfamily:IPR012336"
+ /inference="similar to AA sequence:INSD:AAL20373.1"
+ /note="'KEGG: stm:STM1451 2.0e-101 gst; glutaTHIonine
+ S-transferase K00799;
+ COG: COG0625 GlutaTHIone S-transferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="glutathionine S-transferase"
+ /protein_id="YP_001570569.1"
+ /db_xref="GI:161503457"
+ /db_xref="InterPro:IPR004045"
+ /db_xref="InterPro:IPR004046"
+ /db_xref="InterPro:IPR010987"
+ /db_xref="InterPro:IPR012335"
+ /db_xref="InterPro:IPR012336"
+ /translation="MKLFYKPGACSLASHITLREIGKDFTLDGVDLAKKRLENGDDYL
+ AVNPKGQVPALLLDDGTLLTEGVAIMQYLADSVPDRQLLAPVSSLARYHTLEWLNYIA
+ TELHKGFTPLFRPDTPETIKPAVRAGLEKKFQYVDEALSDDQWICGQRFTIADAYLFT
+ VLRWAYGVNLNMSGFTHIESYMKRVAERPTVAAALKAEGLK"
+ misc_feature 1490236..1490838
+ /locus_tag="SARI_01531"
+ /note="glutathionine S-transferase; Provisional; Region:
+ PRK10542"
+ /db_xref="CDD:182533"
+ misc_feature 1490236..1490469
+ /locus_tag="SARI_01531"
+ /note="GST_N family, Class Beta subfamily; GSTs are
+ cytosolic dimeric proteins involved in cellular
+ detoxification by catalyzing the conjugation of
+ glutathione (GSH) with a wide range of endogenous and
+ xenobiotic alkylating agents, including carcinogens;
+ Region: GST_N_Beta; cd03057"
+ /db_xref="CDD:239355"
+ misc_feature order(1490254..1490259,1490272..1490274,1490278..1490280,
+ 1490290..1490295,1490446..1490448,1490458..1490460)
+ /locus_tag="SARI_01531"
+ /note="C-terminal domain interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:239355"
+ misc_feature order(1490263..1490265,1490386..1490391,1490428..1490433)
+ /locus_tag="SARI_01531"
+ /note="GSH binding site (G-site) [chemical binding]; other
+ site"
+ /db_xref="CDD:239355"
+ misc_feature order(1490386..1490388,1490425..1490430,1490434..1490436,
+ 1490449..1490451,1490458..1490460)
+ /locus_tag="SARI_01531"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:239355"
+ misc_feature 1490500..1490820
+ /locus_tag="SARI_01531"
+ /note="C-terminal, alpha helical domain of Class Beta
+ Glutathione S-transferases; Region: GST_C_Beta; cd03188"
+ /db_xref="CDD:198297"
+ misc_feature order(1490500..1490502,1490509..1490514,1490521..1490523,
+ 1490530..1490532,1490542..1490544,1490554..1490556,
+ 1490581..1490583,1490596..1490598,1490605..1490607,
+ 1490617..1490619)
+ /locus_tag="SARI_01531"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:198297"
+ misc_feature order(1490506..1490508,1490551..1490553,1490692..1490694,
+ 1490713..1490715,1490725..1490727,1490797..1490799,
+ 1490803..1490805,1490815..1490817)
+ /locus_tag="SARI_01531"
+ /note="N-terminal domain interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:198297"
+ misc_feature order(1490539..1490541,1490551..1490556,1490563..1490568,
+ 1490572..1490574,1490716..1490718,1490725..1490727,
+ 1490734..1490736)
+ /locus_tag="SARI_01531"
+ /note="substrate binding pocket (H-site) [chemical
+ binding]; other site"
+ /db_xref="CDD:198297"
+ unsure 1490835..1491176
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(1490900..1491760)
+ /locus_tag="SARI_01532"
+ CDS complement(1490900..1491760)
+ /locus_tag="SARI_01532"
+ /inference="protein motif:HMMPfam:IPR011611"
+ /inference="protein motif:HMMTigr:IPR004625"
+ /inference="similar to AA sequence:REFSEQ:YP_150656.1"
+ /note="catalyzes the formation of pyridoxal 5'-phosphate
+ from pyridoxal"
+ /codon_start=1
+ /transl_table=11
+ /product="pyridoxamine kinase"
+ /protein_id="YP_001570570.1"
+ /db_xref="GI:161503458"
+ /db_xref="InterPro:IPR004625"
+ /db_xref="InterPro:IPR011611"
+ /translation="MKNILAIQSHVVFGHAGNSAAEFPMRRLGANVWPLNTVQFSNHT
+ QYGKWTGCVMPPSHLTEIVQGIADIGQLAHCDAVLSGYLGSAEQGEHILDIVRQVKAA
+ NPQAKYFCDPVMGHPEKGCIVAPGVAEFHVRYALPASDIIAPNLIELEILSKHTVNNA
+ NEAVQAARELIAHGPEIVLVKHLARAGYSSDRFEMLLVTAQEAWHISRPLVDFGLRQP
+ VGVGDVTSGLLLVKLLQGATLQQALEHVTAAVYEIMIATKAMQEYELQVVAAQDRIAN
+ PEHYFSATRL"
+ misc_feature complement(1490903..1491760)
+ /locus_tag="SARI_01532"
+ /note="pyridoxamine kinase; Validated; Region: PRK05756"
+ /db_xref="CDD:235592"
+ misc_feature complement(1490990..1491754)
+ /locus_tag="SARI_01532"
+ /note="Pyridoxal kinase plays a key role in the synthesis
+ of the active coenzyme pyridoxal-5'-phosphate (PLP),
+ by catalyzing the phosphorylation of the precursor vitamin
+ B6 in the presence of Zn2+ and ATP. Mammals are unable to
+ synthesize PLP de novo and...; Region:
+ pyridoxal_pyridoxamine_kinase; cd01173"
+ /db_xref="CDD:238578"
+ misc_feature complement(order(1491554..1491556,1491575..1491580,
+ 1491599..1491601,1491605..1491610,1491635..1491637,
+ 1491644..1491646,1491653..1491670,1491683..1491685,
+ 1491692..1491694,1491704..1491706,1491716..1491718,
+ 1491722..1491727,1491731..1491733,1491752..1491754))
+ /locus_tag="SARI_01532"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238578"
+ misc_feature complement(order(1491092..1491094,1491101..1491106,
+ 1491509..1491511,1491515..1491517,1491614..1491616,
+ 1491629..1491634,1491641..1491643,1491710..1491715,
+ 1491734..1491736))
+ /locus_tag="SARI_01532"
+ /note="pyridoxal binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:238578"
+ misc_feature complement(order(1490999..1491001,1491011..1491013,
+ 1491086..1491088,1491092..1491100,1491107..1491109,
+ 1491128..1491133,1491137..1491139,1491182..1491184,
+ 1491215..1491220,1491317..1491319,1491326..1491328,
+ 1491332..1491334,1491413..1491415,1491428..1491430))
+ /locus_tag="SARI_01532"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238578"
+ gene complement(1491820..1493106)
+ /locus_tag="SARI_01533"
+ CDS complement(1491820..1493106)
+ /locus_tag="SARI_01533"
+ /inference="protein motif:HMMPanther:IPR002307"
+ /inference="protein motif:HMMPfam:IPR002305"
+ /inference="protein motif:HMMPfam:IPR002942"
+ /inference="protein motif:HMMSmart:IPR002942"
+ /inference="protein motif:HMMTigr:IPR002307"
+ /inference="protein motif:ScanRegExp:IPR001412"
+ /inference="similar to AA sequence:INSD:AAV77345.1"
+ /note="catalyzes the formation of tyrosyl-tRNA(Tyr) from
+ tyrosine and tRNA(Tyr)"
+ /codon_start=1
+ /transl_table=11
+ /product="tyrosyl-tRNA synthetase"
+ /protein_id="YP_001570571.1"
+ /db_xref="GI:161503459"
+ /db_xref="InterPro:IPR001412"
+ /db_xref="InterPro:IPR002305"
+ /db_xref="InterPro:IPR002307"
+ /db_xref="InterPro:IPR002942"
+ /translation="MEILMASSNLIKQLQERGLVAQVTDEDALAERLAQGPIALYCGF
+ DPTADSLHLGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQ
+ EWVAKIRKQVAPFLDFDCGENSAIAANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEA
+ VKQRLNRDDQGISFTEFSYNLLQGYDFACLNKLHGVALQIGGSDQWGNITSGIDLTRR
+ LHQNQVFGLTVPLITKADGTKFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFL
+ KFFTFMDIEEINALEEEDKNSGKAPRAQYVLAEQVTRLVHGEEGLIAAKRITESLFNG
+ SLGELSEADFEQLAQDGVPMIELEKGTDLMQALVDAELQPSRGQARKTIASNAVTING
+ EKQSDPEYIFNDEDRLFGRYTLLRRGKKNYCLICWK"
+ misc_feature complement(1491826..1493094)
+ /locus_tag="SARI_01533"
+ /note="tyrosyl-tRNA synthetase; Validated; Region:
+ PRK05912"
+ /db_xref="CDD:235645"
+ misc_feature complement(1492165..1492995)
+ /locus_tag="SARI_01533"
+ /note="catalytic core domain of tyrosinyl-tRNA synthetase;
+ Region: TyrRS_core; cd00805"
+ /db_xref="CDD:173902"
+ misc_feature complement(order(1492381..1492392,1492411..1492416,
+ 1492492..1492494,1492501..1492506,1492510..1492512,
+ 1492549..1492551,1492558..1492560,1492570..1492572,
+ 1492942..1492947,1492951..1492953,1492972..1492980,
+ 1492984..1492986))
+ /locus_tag="SARI_01533"
+ /note="active site"
+ /db_xref="CDD:173902"
+ misc_feature complement(1492942..1492953)
+ /locus_tag="SARI_01533"
+ /note="HIGH motif; other site"
+ /db_xref="CDD:173902"
+ misc_feature complement(order(1492561..1492566,1492573..1492578,
+ 1492582..1492584,1492639..1492644,1492648..1492659,
+ 1492663..1492668,1492675..1492683,1492687..1492692,
+ 1492858..1492863,1492870..1492872))
+ /locus_tag="SARI_01533"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:173902"
+ misc_feature complement(1492378..1492392)
+ /locus_tag="SARI_01533"
+ /note="KMSKS motif; other site"
+ /db_xref="CDD:173902"
+ misc_feature complement(<1491883..1492020)
+ /locus_tag="SARI_01533"
+ /note="S4/Hsp/ tRNA synthetase RNA-binding domain; The
+ domain surface is populated by conserved, charged residues
+ that define a likely RNA-binding site; Found in stress
+ proteins, ribosomal proteins and tRNA synthetases; This
+ may imply a hitherto unrecognized...; Region: S4; cd00165"
+ /db_xref="CDD:238095"
+ misc_feature complement(order(1491898..1491900,1491904..1491927,
+ 1491946..1491948,1491952..1491957,1491964..1491969,
+ 1491973..1491978,1491982..1491987))
+ /locus_tag="SARI_01533"
+ /note="RNA binding surface [nucleotide binding]; other
+ site"
+ /db_xref="CDD:238095"
+ gene complement(1493221..1493925)
+ /locus_tag="SARI_01534"
+ CDS complement(1493221..1493925)
+ /locus_tag="SARI_01534"
+ /inference="protein motif:BlastProDom:IPR000659"
+ /inference="protein motif:Gene3D:IPR012349"
+ /inference="protein motif:HMMPanther:IPR000659"
+ /inference="protein motif:HMMPfam:IPR011576"
+ /inference="protein motif:HMMPIR:IPR000659"
+ /inference="protein motif:HMMTigr:IPR000659"
+ /inference="protein motif:ScanRegExp:IPR000659"
+ /inference="protein motif:superfamily:IPR009002"
+ /inference="similar to AA sequence:SwissProt:Q8ZPM9"
+ /note="catalyzes the formation of pyridoxal 5'-phosphate
+ from pyridoxamine 5'-phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="pyridoxamine 5'-phosphate oxidase"
+ /protein_id="YP_001570572.1"
+ /db_xref="GI:161503460"
+ /db_xref="InterPro:IPR000659"
+ /db_xref="InterPro:IPR009002"
+ /db_xref="InterPro:IPR011576"
+ /db_xref="InterPro:IPR012349"
+ /translation="MGAHNSATHCLFLINAMSDNDQLQQIAHLRREYTKGGLRRRDLP
+ AEPLILFERWLGQACDARLADPTAMVVATVDDKGQPYQRIVLLKHYDEKGLVFYTNLG
+ SRKAHQIEHNPRICLLFPWHMLERQVMVTGMAERLSTLDVVRYFHSRPRDSQIGAWVS
+ KQSSRISARGILESKFLELKQKFQQGEVPLPSFWGGFRVSIEQMEFWQGGEHRLHDRF
+ LYQRDDGAWKIDRLAP"
+ misc_feature complement(1493224..1493808)
+ /locus_tag="SARI_01534"
+ /note="pyridoxamine 5'-phosphate oxidase;
+ Provisional; Region: PRK05679"
+ /db_xref="CDD:235555"
+ misc_feature complement(1493512..1493763)
+ /locus_tag="SARI_01534"
+ /note="Pyridoxamine 5'-phosphate oxidase; Region:
+ Pyridox_oxidase; pfam01243"
+ /db_xref="CDD:216385"
+ misc_feature complement(1493224..1493346)
+ /locus_tag="SARI_01534"
+ /note="Pyridoxine 5'-phosphate oxidase C-terminal
+ dimerisation region; Region: PNPOx_C; pfam10590"
+ /db_xref="CDD:204522"
+ gene complement(1493936..1494265)
+ /locus_tag="SARI_01535"
+ CDS complement(1493936..1494265)
+ /locus_tag="SARI_01535"
+ /inference="similar to AA sequence:INSD:AAX65371.1"
+ /note="MliC; membrane-bound lysozyme inhibitor of c-type
+ lysozyme"
+ /codon_start=1
+ /transl_table=11
+ /product="lysozyme inhibitor"
+ /protein_id="YP_001570573.1"
+ /db_xref="GI:161503461"
+ /translation="MSMKKIVIMCLPALLVGCSVYHQFVERMQTDTLEYQCDEKPLTV
+ NVNNPREEVSFVYDNKLLTLKQGISASGARYTDGIFVFWSQGESATVYKRDRIVLNNC
+ QLQNPKR"
+ misc_feature complement(1493939..1494265)
+ /locus_tag="SARI_01535"
+ /note="lysozyme inhibitor; Provisional; Region: PRK11372"
+ /db_xref="CDD:236902"
+ misc_feature complement(1493969..1494163)
+ /locus_tag="SARI_01535"
+ /note="Membrane-bound lysozyme-inhibitor of c-type
+ lysozyme; Region: MliC; pfam09864"
+ /db_xref="CDD:204332"
+ unsure 1494182..1494215
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(1494349..1495473)
+ /gene="anmK"
+ /locus_tag="SARI_01536"
+ CDS complement(1494349..1495473)
+ /gene="anmK"
+ /locus_tag="SARI_01536"
+ /inference="protein motif:HMMPfam:IPR005338"
+ /inference="similar to AA sequence:INSD:AAO68964.1"
+ /note="'catalyzes hydrolysis of 1,6-anhydro bond of
+ anyhydro-N-acetylmuramic acid (anhMurNAc) and
+ phosphorylates anhMurNAc to produce
+ N-acetyl-muramate-6-phosphate; involved in murein
+ recycling'"
+ /codon_start=1
+ /transl_table=11
+ /product="anhydro-N-acetylmuramic acid kinase"
+ /protein_id="YP_001570574.1"
+ /db_xref="GI:161503462"
+ /db_xref="InterPro:IPR005338"
+ /translation="MKSGRFIGVMSGTSLDGVDVVLAAIDETMVAQQASLTWPIPGHL
+ KKGILDICQGQLLTLSQLGQLDTQLGRLFAQAVNALLAQQHLQPRDIVAIGCHGQTVW
+ HEPTGDAPHTLQIGDNNHIVAHTGITVVGDFRRRDIALGGQGAPLVPAFHHALLGHPT
+ EKRMVLNIGGIANLSLLFPRQAVRGYDTGPGNMLMDAWIWRQCAQPYDKDAAWAKEGK
+ VILPLLQKMLSDPYFAASAPKSTGREYFNYGWLERHLAAFPGASACDVQATLAELTAV
+ SISHQVLLNGGCERLMVCGGGSRNPLVMARLAALLPGIEVATTDKAGISGDDMEALAF
+ AWLAWRTLAGLPGNLPSVTGASKASILGAIYPATPELRVN"
+ misc_feature complement(1494373..1495467)
+ /gene="anmK"
+ /locus_tag="SARI_01536"
+ /note="anhydro-N-acetylmuramic acid kinase; Reviewed;
+ Region: anmK; PRK09585"
+ /db_xref="CDD:236579"
+ gene 1495748..1496215
+ /locus_tag="SARI_01537"
+ CDS 1495748..1496215
+ /locus_tag="SARI_01537"
+ /inference="protein motif:HMMPfam:IPR008816"
+ /inference="similar to AA sequence:REFSEQ:YP_150661.1"
+ /note="'COG: COG3133 Outer membrane lipoprotein;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570575.1"
+ /db_xref="GI:161503463"
+ /db_xref="InterPro:IPR008816"
+ /translation="MIKRVLAVSLMGLSLAGCVNNDSLSGDVYTASEAKQVQNVTYGT
+ IVNVRPVQIQGGDDSNVIGAIGGAVLGGFLGNTIGGGTGRSLATAAGAVAGGVAGQGV
+ QGAMNKTQGVELEIRKDDGNTIMVVQKQGKTRFTAGQRVVLASNGSQVTVSPR"
+ misc_feature 1495748..1496209
+ /locus_tag="SARI_01537"
+ /note="Outer membrane lipoprotein [Cell envelope
+ biogenesis, outer membrane]; Region: SlyB; COG3133"
+ /db_xref="CDD:225675"
+ gene complement(1496263..1496703)
+ /locus_tag="SARI_01538"
+ CDS complement(1496263..1496703)
+ /locus_tag="SARI_01538"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000835"
+ /inference="protein motif:HMMSmart:IPR000835"
+ /inference="protein motif:ScanRegExp:IPR000835"
+ /inference="similar to AA sequence:INSD:AAA58796.1"
+ /note="Transcription regulator that can both activate or
+ repress expression"
+ /codon_start=1
+ /transl_table=11
+ /product="transcriptional regulator SlyA"
+ /protein_id="YP_001570576.1"
+ /db_xref="GI:161503464"
+ /db_xref="InterPro:IPR000835"
+ /db_xref="InterPro:IPR011991"
+ /translation="MKLESPLGSDLARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQ
+ LPPDQSQIQLAKAIGIEQPSLVRTLDQLEDKGLISRQTCASDRRAKRIKLTEKAEPLI
+ TEMEAVIHKTRGEILDGISSEEIALLIKLIAKLEHNIMELHSQD"
+ misc_feature complement(1496266..1496697)
+ /locus_tag="SARI_01538"
+ /note="transcriptional regulator SlyA; Provisional;
+ Region: PRK03573"
+ /db_xref="CDD:179596"
+ misc_feature complement(1496413..1496613)
+ /locus_tag="SARI_01538"
+ /note="Winged helix DNA-binding domain; Region: HTH_27;
+ pfam13463"
+ /db_xref="CDD:222148"
+ gene 1497137..1497991
+ /locus_tag="SARI_01539"
+ CDS 1497137..1497991
+ /locus_tag="SARI_01539"
+ /inference="protein motif:HMMPfam:IPR006143"
+ /inference="protein motif:superfamily:IPR011053"
+ /inference="similar to AA sequence:REFSEQ:NP_456088.1"
+ /note="'COG: COG1566 Multidrug resistance efflux pump;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570577.1"
+ /db_xref="GI:161503465"
+ /db_xref="InterPro:IPR006143"
+ /db_xref="InterPro:IPR011053"
+ /translation="MSLKTIKYFSTLIVAVVAVLAAWWLWNYYMQSPWTRDGKIRAEQ
+ VSVTPQVSGSIIQLNVKDNQFVNAGDVLFVIDKTPFHIAELNAQAQLAKAQSDLAKAN
+ NEANRRRHLSRNYISAEDLDSANLNVKAMQASVDVALATLKQAQWQLSQTAVKAPVSG
+ WVTNLSTRIGDYATTGKPLFALVDSHSFYVIGYFEETKLRHITVGEPALITLYSDNIK
+ LQGHVASIGRAIYDQSVESDSGLVPDIKPNVPWVRLAQRVPVRIEFDALPQDITLVSG
+ TTCSVAIG"
+ misc_feature 1497137..1497985
+ /locus_tag="SARI_01539"
+ /note="Multidrug resistance efflux pump [Defense
+ mechanisms]; Region: EmrA; COG1566"
+ /db_xref="CDD:224482"
+ misc_feature 1497263..1497412
+ /locus_tag="SARI_01539"
+ /note="Biotin-lipoyl like; Region: Biotin_lipoyl_2;
+ pfam13533"
+ /db_xref="CDD:205711"
+ misc_feature 1497596..1497838
+ /locus_tag="SARI_01539"
+ /note="HlyD family secretion protein; Region: HlyD_3;
+ pfam13437"
+ /db_xref="CDD:222128"
+ gene 1497997..1500018
+ /locus_tag="SARI_01540"
+ CDS 1497997..1500018
+ /locus_tag="SARI_01540"
+ /inference="protein motif:HMMPfam:IPR006726"
+ /inference="protein motif:ScanRegExp:IPR002016"
+ /note="'COG: COG1289 Predicted membrane protein;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570578.1"
+ /db_xref="GI:161503466"
+ /db_xref="InterPro:IPR002016"
+ /db_xref="InterPro:IPR006726"
+ /translation="MALFLPPLRNTPWFKATSGQWRYALRNSIAMCLALTFAYYLNLD
+ EPYWAMTSAAVVSFPTVGGVISKSLGRIAGSLLGATAALIIAGHTLNEPWLFLFSMAA
+ WIGFCTWACAHFTNNAAYAFQLSGYTAAIIAFPMVNFVEITQLWDIAQARVCEVIVGI
+ LCGGMMMMILPSTSDGAALLTALKNMHARLLEHASLLWQPDTTDVIRSAHEDVIGQIL
+ TMNLLRIQAFWSHYRFRRQNALLNSLLHQQLRLTSVISSLRRMLLNWPTPPENSHQVL
+ EQLLVALAKPGADSYTVARIIAPLRPQDEQDYRLLAFWQRLRYFCQLYLLCSRQLYLL
+ ENGTPEDQIKIRRTPGLARHTDNTEAIWSGVRTFCTLTVIGAWSIGAQWESGSGALTL
+ AAISCVLYSIVATPFKSLSLLMRILVLLSLFSFVVKFGLMVQITDLWQFLLFLFPLFT
+ TMQLLKLQMPKLAGLWGQLIVFMGSFIAVTNPPVYNFADFLNDNTAKIVGVAISWLAF
+ AILRPGSDARKSRRHIRALRRDFVDQLSRHPSHSESEFESLTYHHVSQLSNSQDTLAR
+ RWLLRWGVVLLNCSHVVWQLRAWESRSDPLSRVRDICLTLLRDVMSERGVQQHSLATT
+ LQELQRICDTLAHHHQPAAHELAAIIWRLHCSLSQLEQAPPQVRCLRVI"
+ misc_feature 1498054..1499985
+ /locus_tag="SARI_01540"
+ /note="Fusaric acid resistance protein family; Region:
+ FUSC; pfam04632"
+ /db_xref="CDD:218184"
+ misc_feature 1498093..1498461
+ /locus_tag="SARI_01540"
+ /note="Fusaric acid resistance protein-like; Region:
+ FUSC_2; pfam13515"
+ /db_xref="CDD:222189"
+ gene complement(1500011..1500532)
+ /locus_tag="SARI_01541"
+ CDS complement(1500011..1500532)
+ /locus_tag="SARI_01541"
+ /inference="protein motif:BlastProDom:IPR001424"
+ /inference="protein motif:Gene3D:IPR001424"
+ /inference="protein motif:HMMPfam:IPR001424"
+ /inference="protein motif:ScanRegExp:IPR001424"
+ /inference="similar to AA sequence:INSD:CAD01927.1"
+ /note="SodC; copper and zinc binding; converts superoxide
+ radicals to hydrogen peroxide and water"
+ /codon_start=1
+ /transl_table=11
+ /product="superoxide dismutase"
+ /protein_id="YP_001570579.1"
+ /db_xref="GI:161503467"
+ /db_xref="InterPro:IPR001424"
+ /translation="MKRLSLAMVTLLACAGAQAASEKVEMNLVTAQGVGQSIGTVVID
+ ETEDGLKFTPHLKALPPGEHGFHIHAKGSCQPAIKDGKAVAAEAAGGHLDPQNTGKHE
+ GPEGLGHLGDLPVLVVNNDGIATEPVTAPRLKSLDQVKDKALMIHVGGDNMSDQPKPL
+ GGGGTRYACGVIK"
+ misc_feature complement(1500014..1500532)
+ /locus_tag="SARI_01541"
+ /note="Cu/Zn superoxide dismutase [Inorganic ion transport
+ and metabolism]; Region: SodC; COG2032"
+ /db_xref="CDD:224943"
+ misc_feature complement(1500014..1500430)
+ /locus_tag="SARI_01541"
+ /note="Copper/zinc superoxide dismutase (SOD). superoxide
+ dismutases catalyse the conversion of superoxide radicals
+ to molecular oxygen. Three evolutionarily distinct
+ families of SODs are known, of which the
+ copper/zinc-binding family is one. Defects in the...;
+ Region: Cu-Zn_Superoxide_Dismutase; cd00305"
+ /db_xref="CDD:238186"
+ misc_feature complement(order(1500110..1500115,1500314..1500322,
+ 1500407..1500409,1500413..1500415))
+ /locus_tag="SARI_01541"
+ /note="E-class dimer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:238186"
+ misc_feature complement(order(1500182..1500184,1500380..1500382))
+ /locus_tag="SARI_01541"
+ /note="P-class dimer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:238186"
+ misc_feature complement(order(1500092..1500094,1500197..1500199,
+ 1500206..1500208,1500257..1500259,1500326..1500328,
+ 1500332..1500334))
+ /locus_tag="SARI_01541"
+ /note="active site"
+ /db_xref="CDD:238186"
+ misc_feature complement(order(1500092..1500094,1500257..1500259,
+ 1500326..1500328,1500332..1500334))
+ /locus_tag="SARI_01541"
+ /note="Cu2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238186"
+ misc_feature complement(order(1500197..1500199,1500206..1500208,
+ 1500230..1500232,1500257..1500259))
+ /locus_tag="SARI_01541"
+ /note="Zn2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238186"
+ gene complement(1500612..1501550)
+ /locus_tag="SARI_01542"
+ CDS complement(1500612..1501550)
+ /locus_tag="SARI_01542"
+ /inference="protein motif:BlastProDom:IPR001395"
+ /inference="protein motif:Gene3D:IPR001395"
+ /inference="protein motif:HMMPanther:IPR001395"
+ /inference="protein motif:HMMPfam:IPR001395"
+ /inference="similar to AA sequence:INSD:AAL20361.1"
+ /note="'KEGG: ecc:c2039 9.5e-143 ydhF; hypothetical
+ oxidoreductase YdhF;
+ COG: COG4989 Predicted oxidoreductase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570580.1"
+ /db_xref="GI:161503468"
+ /db_xref="InterPro:IPR001395"
+ /translation="MRILNLIILYEESVMVQRVTIAPQGPEFSRFVMGYWRLMDWNIS
+ ARQLVSFIEEHLDLGVTTVDHADIYGSYQCEAAFGEALTLAPHLREKLQIVTKCGIAT
+ TARAENKLGHYITDCRHIILSAEQSLKNLATDHLDMLLIHRPDPLMDADEVTQAFQHL
+ HQSGKVRHFGVSNFTPAQFTLLQSRLPFTLATNQVEISPVHQPLLLDGTLDHLQQLRI
+ RPMAWSCLGGGRLFNDEAYQPLRQELSVIAQELNASSIEQVVYAWILRLPSQPLPIIG
+ SGKIERVRAAVEAETLSLSRQQWFRIRKAALGYDVP"
+ misc_feature complement(1500636..1501499)
+ /locus_tag="SARI_01542"
+ /note="Aldo-keto reductases (AKRs) are a superfamily of
+ soluble NAD(P)(H) oxidoreductases whose chief purpose is
+ to reduce aldehydes and ketones to primary and secondary
+ alcohols. AKRs are present in all phyla and are of
+ importance to both health and industrial...; Region:
+ Aldo_ket_red; cd06660"
+ /db_xref="CDD:119408"
+ misc_feature complement(1500633..1501463)
+ /locus_tag="SARI_01542"
+ /note="Aldo/keto reductase family; Region: Aldo_ket_red;
+ pfam00248"
+ /db_xref="CDD:215817"
+ misc_feature complement(order(1500693..1500698,1500705..1500707,
+ 1500720..1500731,1500780..1500782,1500867..1500884,
+ 1500969..1500971,1501032..1501037,1501122..1501127,
+ 1501260..1501262,1501344..1501346,1501359..1501361,
+ 1501443..1501451))
+ /locus_tag="SARI_01542"
+ /note="active site"
+ /db_xref="CDD:119408"
+ misc_feature complement(order(1501125..1501127,1501260..1501262,
+ 1501344..1501346,1501359..1501361))
+ /locus_tag="SARI_01542"
+ /note="catalytic tetrad [active]"
+ /db_xref="CDD:119408"
+ unsure 1501329..1501573
+ /note="Sequence derived from one plasmid subclone"
+ gene 1501655..1501834
+ /locus_tag="SARI_01543"
+ CDS 1501655..1501834
+ /locus_tag="SARI_01543"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570581.1"
+ /db_xref="GI:161503469"
+ /translation="MFLGIAHFLPVKPFVAAAHTSPAKATLIRLADTATWAYYRKKLQ
+ LLGHISSSTFGAYDY"
+ gene 1501901..1502500
+ /locus_tag="SARI_01544"
+ CDS 1501901..1502500
+ /locus_tag="SARI_01544"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR001647"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:INSD:CAD01930.1"
+ /note="'KEGG: bpm:BURPS1710b_A2293 5.6e-35 TetR-family
+ regulatory protein K00356;
+ COG: COG1309 Transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570582.1"
+ /db_xref="GI:161503470"
+ /db_xref="InterPro:IPR001647"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /translation="MNKQTEHDTREHLLTIGELLCMQRGFTGMGLSELLKTAQVPKGS
+ FYHYFRSKEAFGVAMLERHYACYHQRLTAHFTYGPGDHRDRILAWYQETLNKFCQQGA
+ ISGCLTVKLSAEVCDLSEDMRSAMDKGARDITTLLARALEDGRNSDCLHFTGQPLQQA
+ QVLYALWLGANLQAKISRSAEPLENALAHVKTILTTPEQ"
+ misc_feature 1501901..1502482
+ /locus_tag="SARI_01544"
+ /note="Transcriptional regulator [Transcription]; Region:
+ AcrR; COG1309"
+ /db_xref="CDD:224228"
+ misc_feature <1501967..1502077
+ /locus_tag="SARI_01544"
+ /note="Bacterial regulatory proteins, tetR family; Region:
+ TetR_N; pfam00440"
+ /db_xref="CDD:201228"
+ gene 1502560..1503657
+ /locus_tag="SARI_01545"
+ CDS 1502560..1503657
+ /locus_tag="SARI_01545"
+ /inference="protein motif:HMMPfam:IPR001155"
+ /inference="similar to AA sequence:REFSEQ:YP_216442.1"
+ /note="FMN-linked; catalyzes the formation of
+ N-ethylsuccinimide from N-ethylmaleimide"
+ /codon_start=1
+ /transl_table=11
+ /product="N-ethylmaleimide reductase"
+ /protein_id="YP_001570583.1"
+ /db_xref="GI:161503471"
+ /db_xref="InterPro:IPR001155"
+ /translation="MSSEKLFTPLKVGAITATNRIFMAPLTRLRSIEPGDIPTPLMAE
+ YYRQRASAGLIISEATQISAQAKGYAGAPGLHSDEQIAAWKKITQGVHAQGGHMAVQL
+ WHTGRISHASLQPGGQAPVAPSAINAGTRTSLRDENGQAIRVETSTPRALDTHEIPGI
+ VNDFRQAIANAREAGFDLVELHAAHGYLLHQFLSPSSNHRTNQYGGSVENRARLVLDV
+ IDAGIEEWGADRIGIRLSPVGTFQNVDNGPNEEADALYLIEALGKRGIAYLHMSEPDW
+ AGGMPYTEAFRKKVRACFHGPIIGAGAYTPEKAEALIEKGLIDAVAFGRDYIANPDLV
+ ARLQRKAKLNPQRPESFYGGGEEGYTDYPTL"
+ misc_feature 1502560..1503654
+ /locus_tag="SARI_01545"
+ /note="NADH:flavin oxidoreductases, Old Yellow Enzyme
+ family [Energy production and conversion]; Region: NemA;
+ COG1902"
+ /db_xref="CDD:224814"
+ misc_feature 1502572..1503594
+ /locus_tag="SARI_01545"
+ /note="Old yellow enzyme (OYE)-like FMN binding domain.
+ OYE was the first flavin-dependent enzyme identified,
+ however its true physiological role remains elusive to
+ this day. Each monomer of OYE contains FMN as a
+ non-covalently bound cofactor, uses NADPH as a...; Region:
+ OYE_like_FMN; cd02933"
+ /db_xref="CDD:239243"
+ misc_feature order(1502632..1502634,1502638..1502640,1502734..1502736,
+ 1502860..1502862,1503259..1503261,1503463..1503465,
+ 1503523..1503525,1503529..1503537)
+ /locus_tag="SARI_01545"
+ /note="FMN binding site [chemical binding]; other site"
+ /db_xref="CDD:239243"
+ misc_feature order(1502632..1502634,1502638..1502640,1502734..1502736,
+ 1502860..1502862,1502866..1502868,1502887..1502889,
+ 1503103..1503105,1503112..1503114,1503118..1503120,
+ 1503259..1503261,1503280..1503282,1503463..1503465,
+ 1503523..1503525,1503529..1503534)
+ /locus_tag="SARI_01545"
+ /note="active site"
+ /db_xref="CDD:239243"
+ misc_feature order(1502638..1502640,1502866..1502868,1503103..1503105,
+ 1503112..1503114,1503118..1503120,1503532..1503534)
+ /locus_tag="SARI_01545"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:239243"
+ misc_feature 1503118..1503120
+ /locus_tag="SARI_01545"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:239243"
+ unsure 1502689..1503200
+ /locus_tag="SARI_01545"
+ /note="Sequence derived from one plasmid subclone"
+ gene 1503744..1504133
+ /locus_tag="SARI_01546"
+ CDS 1503744..1504133
+ /locus_tag="SARI_01546"
+ /inference="protein motif:BlastProDom:IPR011588"
+ /inference="protein motif:HMMPfam:IPR004360"
+ /inference="protein motif:HMMTigr:IPR004361"
+ /inference="protein motif:ScanRegExp:IPR004361"
+ /inference="similar to AA sequence:INSD:AAL20357.1"
+ /note="Ni-dependent; catalyzes the formation of
+ S-lactoylglutathione from methylglyoxal and glutathione"
+ /codon_start=1
+ /transl_table=11
+ /product="glyoxalase I"
+ /protein_id="YP_001570584.1"
+ /db_xref="GI:161503472"
+ /db_xref="InterPro:IPR004360"
+ /db_xref="InterPro:IPR004361"
+ /db_xref="InterPro:IPR011588"
+ /translation="MLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPET
+ EEAVIELTYNWGVESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGST
+ VIAFVEDPDGYKIELIEAKDAGRGLGN"
+ misc_feature 1503744..1504097
+ /locus_tag="SARI_01546"
+ /note="Glyoxalase I catalyzes the isomerization of the
+ hemithioacetal, formed by a 2-oxoaldehyde and glutathione,
+ to S-D-lactoylglutathione; Region: Glyoxalase_I; cd07233"
+ /db_xref="CDD:176659"
+ misc_feature 1503744..1504094
+ /locus_tag="SARI_01546"
+ /note="Glyoxalase/Bleomycin resistance protein/Dioxygenase
+ superfamily; Region: Glyoxalase; pfam00903"
+ /db_xref="CDD:216182"
+ misc_feature order(1503744..1503746,1503750..1503752,1503762..1503767,
+ 1503774..1503779,1503786..1503791,1503798..1503800,
+ 1503807..1503809,1503816..1503821,1503849..1503851,
+ 1503861..1503863,1503882..1503884,1503888..1503893,
+ 1503903..1503908,1503936..1503965,1503987..1503989,
+ 1504080..1504082,1504089..1504091)
+ /locus_tag="SARI_01546"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:176659"
+ misc_feature order(1503750..1503752,1503825..1503827,1503840..1503842,
+ 1503846..1503848,1503891..1503893,1503897..1503899,
+ 1503903..1503905,1503945..1503947,1504017..1504019,
+ 1504053..1504055,1504059..1504061,1504083..1504085,
+ 1504089..1504091)
+ /locus_tag="SARI_01546"
+ /note="active site"
+ /db_xref="CDD:176659"
+ misc_feature order(1503750..1503752,1503825..1503827,1503840..1503842,
+ 1503846..1503848,1503897..1503899,1503903..1503905,
+ 1504017..1504019,1504053..1504055,1504059..1504061,
+ 1504083..1504085)
+ /locus_tag="SARI_01546"
+ /note="glutathione binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:176659"
+ unsure 1504213..1504488
+ /note="Sequence derived from one plasmid subclone"
+ gene 1504234..1504881
+ /locus_tag="SARI_01547"
+ CDS 1504234..1504881
+ /locus_tag="SARI_01547"
+ /inference="protein motif:HMMPfam:IPR013520"
+ /inference="protein motif:HMMSmart:IPR006055"
+ /inference="protein motif:HMMTigr:IPR005987"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:INSD:CAD01933.1"
+ /note="Responsible for the end-turnover of tRNA:
+ specifically removes the terminal AMP residue from
+ uncharged tRNA (tRNA-C-C-A)"
+ /codon_start=1
+ /transl_table=11
+ /product="ribonuclease T"
+ /protein_id="YP_001570585.1"
+ /db_xref="GI:161503473"
+ /db_xref="InterPro:IPR005987"
+ /db_xref="InterPro:IPR006055"
+ /db_xref="InterPro:IPR012337"
+ /db_xref="InterPro:IPR013520"
+ /translation="MSDNAQLSGLCDRFRGFYPVVIDVETAGFNAKTDALLEIAAITL
+ KMDEQGWLMPDMTLHFHVEPFAGANLQPEALAFNGIDPSNPLRGAVSEYEALHAIFKM
+ VRKGIKESGCSRAIMVAHNATFDHSFMMAAAERASLKRNPFHPFVTFDTAALSGLALG
+ QTVLSKACLAAGMEFDGEKAHSALYDTERTAVLFCEIVNRWKRLGGWPLPLPTDK"
+ misc_feature 1504261..1504866
+ /locus_tag="SARI_01547"
+ /note="DNA polymerase III, epsilon subunit and related
+ 3'-5' exonucleases [DNA replication,
+ recombination, and repair]; Region: DnaQ; COG0847"
+ /db_xref="CDD:223916"
+ misc_feature 1504270..1504836
+ /locus_tag="SARI_01547"
+ /note="DEDDh 3'-5' exonuclease domain of RNase
+ T; Region: RNaseT; cd06134"
+ /db_xref="CDD:99837"
+ misc_feature order(1504270..1504272,1504276..1504278,1504600..1504602,
+ 1504669..1504683,1504690..1504692,1504699..1504704,
+ 1504711..1504716,1504834..1504836)
+ /locus_tag="SARI_01547"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:99837"
+ misc_feature order(1504300..1504302,1504306..1504308,1504606..1504608,
+ 1504774..1504776,1504789..1504791)
+ /locus_tag="SARI_01547"
+ /note="catalytic site [active]"
+ /db_xref="CDD:99837"
+ misc_feature order(1504300..1504311,1504315..1504317,1504591..1504596,
+ 1504600..1504608,1504774..1504776,1504789..1504791)
+ /locus_tag="SARI_01547"
+ /note="putative active site [active]"
+ /db_xref="CDD:99837"
+ misc_feature order(1504300..1504311,1504315..1504317,1504591..1504596,
+ 1504600..1504605,1504774..1504776,1504789..1504791)
+ /locus_tag="SARI_01547"
+ /note="putative substrate binding site [chemical binding];
+ other site"
+ /db_xref="CDD:99837"
+ unsure 1504936..1505204
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(1504960..1505307)
+ /locus_tag="SARI_01548"
+ CDS complement(1504960..1505307)
+ /locus_tag="SARI_01548"
+ /inference="protein motif:Gene3D:IPR012335"
+ /inference="protein motif:HMMPanther:IPR004480"
+ /inference="protein motif:HMMPfam:IPR002109"
+ /inference="protein motif:HMMTigr:IPR004480"
+ /inference="protein motif:superfamily:IPR012336"
+ /inference="similar to AA sequence:INSD:AAL20355.1"
+ /note="'KEGG: ama:AM1083 1.2e-07 grxC1; glutaredoxin 3
+ K03676;
+ COG: COG0278 Glutaredoxin-related protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570586.1"
+ /db_xref="GI:161503474"
+ /db_xref="InterPro:IPR002109"
+ /db_xref="InterPro:IPR004480"
+ /db_xref="InterPro:IPR012335"
+ /db_xref="InterPro:IPR012336"
+ /translation="MSTTIEKIQRQIAENPILLYMKGSPKLPSCGFSAQAVQALSACG
+ ERFAYVDILQNPDIRAELPKYANWPTFPQLWVDGELVGGCDIVIEMYQRGELQQLIKE
+ TAAKYKTQEPDAG"
+ misc_feature complement(1505017..1505286)
+ /locus_tag="SARI_01548"
+ /note="Glutaredoxin (GRX) family, PKC-interacting cousin
+ of TRX (PICOT)-like subfamily; composed of PICOT and
+ GRX-PICOT-like proteins. The non-PICOT members of this
+ family contain only the GRX-like domain, whereas PICOT
+ contains an N-terminal TRX-like domain...; Region:
+ GRX_PICOT_like; cd03028"
+ /db_xref="CDD:239326"
+ misc_feature complement(order(1505095..1505100,1505212..1505220,
+ 1505242..1505244))
+ /locus_tag="SARI_01548"
+ /note="putative GSH binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:239326"
+ misc_feature complement(order(1505209..1505211,1505218..1505220))
+ /locus_tag="SARI_01548"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:239326"
+ gene complement(1505761..1505901)
+ /locus_tag="SARI_01549"
+ CDS complement(1505761..1505901)
+ /locus_tag="SARI_01549"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570587.1"
+ /db_xref="GI:161503475"
+ /translation="MEAIVRFGAETKEERLVFEVFFTFFLLVLLIFLLVVLFFFSTVL
+ VA"
+ gene 1505972..1506475
+ /locus_tag="SARI_01550"
+ CDS 1505972..1506475
+ /locus_tag="SARI_01550"
+ /inference="protein motif:HMMPfam:IPR000064"
+ /inference="similar to AA sequence:INSD:CAD01935.1"
+ /note="'KEGG: ssn:SSO_1501 3.9e-75 ydhO; putative
+ lipoprotein K01183;
+ COG: COG0791 Cell wall-associated hydrolases
+ (invasion-associated proteins);
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570588.1"
+ /db_xref="GI:161503476"
+ /db_xref="InterPro:IPR000064"
+ /translation="MEKCTTRKGRKSHCVKKKGTLPVSIADAHRDKVQKATKTAMSKL
+ MNQIGKPYHWGGASPRTGFDCSGLVYYAYKDLVKIRIPRTANEMYHLRDAAPIARSEL
+ KNGDLVFFRTQGRGTADHVGVYVGNGKFIQSPRSGQEIRITSLNEVYWQRHYVGARRV
+ MTSKTIR"
+ misc_feature <1506056..1506445
+ /locus_tag="SARI_01550"
+ /note="Cell wall-associated hydrolases
+ (invasion-associated proteins) [Cell envelope biogenesis,
+ outer membrane]; Region: Spr; COG0791"
+ /db_xref="CDD:223862"
+ misc_feature 1506116..1506448
+ /locus_tag="SARI_01550"
+ /note="NlpC/P60 family; Region: NLPC_P60; pfam00877"
+ /db_xref="CDD:189752"
+ gene 1506602..1507183
+ /locus_tag="SARI_01551"
+ CDS 1506602..1507183
+ /locus_tag="SARI_01551"
+ /inference="protein motif:BlastProDom:IPR001189"
+ /inference="protein motif:FPrintScan:IPR001189"
+ /inference="protein motif:Gene3D:IPR001189"
+ /inference="protein motif:HMMPanther:IPR001189"
+ /inference="protein motif:HMMPfam:IPR001189"
+ /inference="protein motif:ScanRegExp:IPR001189"
+ /inference="protein motif:superfamily:IPR001189"
+ /inference="similar to AA sequence:REFSEQ:YP_216437.1"
+ /note="SodB; iron binding; present under aerobic and
+ anaerobic conditions; destroys free radicals"
+ /codon_start=1
+ /transl_table=11
+ /product="superoxide dismutase"
+ /protein_id="YP_001570589.1"
+ /db_xref="GI:161503477"
+ /db_xref="InterPro:IPR001189"
+ /translation="MSFELPALPYAKDALAPHISAETLEYHYGKHHQTYVTNLNNLIK
+ GTAFEGKSLEEIIRASEGGIFNNAAQVWNHTFYWHCLAPNAGGEPTGKLADAIAASFG
+ SFTEFKTQFTDAAIKNFGSGWTWLVKGADGKLAIVSTSNAGTPLTTDATPLLTVDVWE
+ HAYYIDYRNARPNYLEHFWALVNWEFVAKNLAA"
+ misc_feature 1506602..1507180
+ /locus_tag="SARI_01551"
+ /note="superoxide dismutase; Provisional; Region:
+ PRK10543"
+ /db_xref="CDD:182534"
+ misc_feature 1506605..1506847
+ /locus_tag="SARI_01551"
+ /note="Iron/manganese superoxide dismutases, alpha-hairpin
+ domain; Region: Sod_Fe_N; pfam00081"
+ /db_xref="CDD:200985"
+ misc_feature 1506860..1507174
+ /locus_tag="SARI_01551"
+ /note="Iron/manganese superoxide dismutases, C-terminal
+ domain; Region: Sod_Fe_C; pfam02777"
+ /db_xref="CDD:202388"
+ gene 1507823..1508848
+ /locus_tag="SARI_01552"
+ CDS 1507823..1508848
+ /locus_tag="SARI_01552"
+ /inference="protein motif:FPrintScan:IPR000843"
+ /inference="protein motif:HMMPfam:IPR000843"
+ /inference="protein motif:HMMPfam:IPR001761"
+ /inference="protein motif:HMMSmart:IPR000843"
+ /inference="protein motif:ScanRegExp:IPR000843"
+ /inference="protein motif:superfamily:IPR010982"
+ /inference="similar to AA sequence:INSD:AAO68948.1"
+ /note="'binds to the purF operator and coregulates other
+ genes for de novo purine nucleotide synthesis; is involved
+ in regulation of purB, purC, purEK, purHD, purL, purMN and
+ guaBA expression; binds hypoxanthine and guanine as
+ inducers'"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional repressor PurR"
+ /protein_id="YP_001570590.1"
+ /db_xref="GI:161503478"
+ /db_xref="InterPro:IPR000843"
+ /db_xref="InterPro:IPR001761"
+ /db_xref="InterPro:IPR010982"
+ /translation="MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELH
+ YSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLE
+ KQRAYLSMMAQKRVDGLLVMCSEYPEPLLSMLEEYRHIPMVVMDWGEAKADFTDTVID
+ NAFEGGYMAGRYLVERGHRDIGVIPGPLERNTGAGRLAGFMKAMEEALIKVPDNWIVQ
+ GDFEPESGYHAMQQILSQSHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSVIGYDN
+ VRNARFFTPALTTIHQPKDSLGETAFNMLLDRIVNKREESQSIEVHPRLVERRSVADG
+ PFRDYRR"
+ misc_feature 1507823..1508845
+ /locus_tag="SARI_01552"
+ /note="DNA-binding transcriptional repressor PurR;
+ Provisional; Region: PRK10703"
+ /db_xref="CDD:236739"
+ misc_feature 1507835..1507987
+ /locus_tag="SARI_01552"
+ /note="Helix-turn-helix (HTH) DNA binding domain of the
+ LacI family of transcriptional regulators; Region:
+ HTH_LacI; cd01392"
+ /db_xref="CDD:143331"
+ misc_feature order(1507835..1507837,1507859..1507873,1507877..1507882,
+ 1507889..1507891,1507904..1507909,1507916..1507918,
+ 1507955..1507957,1507964..1507966,1507973..1507978,
+ 1507982..1507987)
+ /locus_tag="SARI_01552"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:143331"
+ misc_feature 1507955..1507984
+ /locus_tag="SARI_01552"
+ /note="domain linker motif; other site"
+ /db_xref="CDD:143331"
+ misc_feature 1508003..1508812
+ /locus_tag="SARI_01552"
+ /note="Ligand-binding domain of purine repressor, PurR,
+ which functions as the master regulatory protein of de
+ novo purine nucleotide biosynthesis in Escherichia coli;
+ Region: PBP1_PurR; cd06275"
+ /db_xref="CDD:107270"
+ misc_feature order(1508030..1508032,1508078..1508080,1508090..1508092,
+ 1508096..1508104,1508141..1508143,1508162..1508164,
+ 1508492..1508494,1508576..1508578,1508588..1508590,
+ 1508600..1508602,1508657..1508659,1508663..1508668,
+ 1508807..1508809)
+ /locus_tag="SARI_01552"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:107270"
+ misc_feature order(1508039..1508041,1508390..1508392,1508396..1508398,
+ 1508408..1508410,1508483..1508485,1508645..1508647)
+ /locus_tag="SARI_01552"
+ /note="ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:107270"
+ gene complement(1508845..1509777)
+ /locus_tag="SARI_01553"
+ CDS complement(1508845..1509777)
+ /locus_tag="SARI_01553"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="protein motif:HMMPfam:IPR005119"
+ /inference="similar to AA sequence:INSD:AAL20351.1"
+ /note="'KEGG: shn:Shewana3_3435 0.00016 transcriptional
+ regulator, LysR family K06022;
+ COG: COG0583 Transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative DNA-binding transcriptional regulator"
+ /protein_id="YP_001570591.1"
+ /db_xref="GI:161503479"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR005119"
+ /db_xref="InterPro:IPR011991"
+ /translation="MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWL
+ AVPLFLRRHRDVELTPAGVWFLKEGRSVIKKMQITRQQCQQIANGWRGQLAIAVDNIV
+ RPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATQAIPVGGRYAF
+ RDMGTLRWSCVVASDHPLASMPGPLSDDTLRNWPSLVREDTSRSLPKRITWLLDNQKR
+ VVVPDWESSATCLSAGLCVGMVPTHFARQWIDNGEWVALTLENPFPDAACCVTWQQNE
+ ASPALAWLLDYLGDSETLNREWLREPEEAPDSAD"
+ misc_feature complement(1508878..1509777)
+ /locus_tag="SARI_01553"
+ /note="putative DNA-binding transcriptional regulator;
+ Provisional; Region: PRK11074"
+ /db_xref="CDD:182948"
+ misc_feature complement(1509592..1509759)
+ /locus_tag="SARI_01553"
+ /note="Bacterial regulatory helix-turn-helix protein, lysR
+ family; Region: HTH_1; pfam00126"
+ /db_xref="CDD:215735"
+ misc_feature complement(1508914..1509501)
+ /locus_tag="SARI_01553"
+ /note="The substrate binding domain of LysR-type
+ transcriptional regulators (LTTRs), a member of the type 2
+ periplasmic binding fold protein superfamily; Region:
+ PBP2_LTTR_substrate; cl11398"
+ /db_xref="CDD:245600"
+ misc_feature complement(order(1509079..1509084,1509088..1509093,
+ 1509109..1509126,1509397..1509417,1509421..1509423,
+ 1509433..1509435,1509442..1509447,1509451..1509456))
+ /locus_tag="SARI_01553"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:176102"
+ gene 1509890..1511095
+ /locus_tag="SARI_01554"
+ CDS 1509890..1511095
+ /locus_tag="SARI_01554"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="protein motif:HMMTigr:IPR004812"
+ /inference="similar to AA sequence:INSD:AAV77366.1"
+ /note="uncharacterized member of the major facilitator
+ superfamily (MFS)"
+ /codon_start=1
+ /transl_table=11
+ /product="inner membrane transport protein YdhC"
+ /protein_id="YP_001570592.1"
+ /db_xref="GI:161503480"
+ /db_xref="InterPro:IPR004812"
+ /db_xref="InterPro:IPR011701"
+ /translation="MQPGKGFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPAAAVS
+ ASLSLFLAGFAVAQLLWGPLSDRYGRKPILLLGLSIFALGSLGMLWVESAAALLTLRF
+ VQAVGVCAATVIWQALVADYYPAQKINRIFATIMPLVGLSPALAPLLGSWILTHFSWQ
+ AIFATLFAITLLLMLPALRLKASVKARAEGQDKFTFATLLRSKTYRGNVLIYAACSAS
+ FFAWLTGSPFILSAMGYSPAVIGLSYVPQTIAFLIGGYSCRAALQKWQGYQLLPWLLG
+ LYALSVIATWGAGFLNDASLVEILIPFCVMAIANGAIYPIVVAQALRPFPQATGRAAA
+ LQNTLQLGLCFLASLVVSWLISTPLLTTTSVMLSTVVLAALGYKIQSHAASDEAGFPH
+ ADVAHEKYR"
+ misc_feature 1509890..1511080
+ /locus_tag="SARI_01554"
+ /note="putative transporter; Provisional; Region:
+ PRK11043"
+ /db_xref="CDD:182924"
+ misc_feature 1509911..1510954
+ /locus_tag="SARI_01554"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature order(1509953..1509955,1509962..1509970,1509974..1509979,
+ 1510028..1510030,1510037..1510042,1510049..1510051,
+ 1510061..1510066,1510070..1510075,1510211..1510216,
+ 1510223..1510228,1510235..1510240,1510247..1510249,
+ 1510283..1510288,1510295..1510300,1510316..1510318,
+ 1510535..1510537,1510544..1510549,1510556..1510561,
+ 1510568..1510570,1510607..1510609,1510619..1510621,
+ 1510631..1510633,1510640..1510642,1510652..1510654,
+ 1510808..1510810,1510817..1510822,1510829..1510831,
+ 1510841..1510846,1510853..1510855,1510883..1510888,
+ 1510895..1510900,1510907..1510912,1510919..1510921)
+ /locus_tag="SARI_01554"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ unsure 1511332..1511370
+ /note="Sequence derived from one plasmid subclone"
+ gene 1511386..1512534
+ /locus_tag="SARI_01555"
+ CDS 1511386..1512534
+ /locus_tag="SARI_01555"
+ /inference="protein motif:HMMPfam:IPR003333"
+ /inference="similar to AA sequence:INSD:AAL20349.1"
+ /note="catalyzes the transfer of a methylene group from
+ S-adenosyl-L-methionine to the cis double bond of an
+ unsaturated fatty acid chain resulting in the replacement
+ of the double bond with a methylene bridge"
+ /codon_start=1
+ /transl_table=11
+ /product="cyclopropane fatty acyl phospholipid synthase"
+ /protein_id="YP_001570593.1"
+ /db_xref="GI:161503481"
+ /db_xref="InterPro:IPR003333"
+ /translation="MSSSCIEEVSVPDDNWYRIANELLSRADITINGSAPSDIRVNNP
+ DFFKRVLQEGSLGLGESYMDGWWECERLDIFFTKVLRAGLENQLPHHVKDTLRILGAR
+ LINLQSKKRAWIVGKEHYDLGNDLFSRMLDPYMQYSCAYWKDADTLEAAQQAKLELIC
+ EKLQLQPGMRVLDIGCGWGGLSQYMATQYGVSVVGVTISAEQQKMAQTRCEGLDVSIL
+ LQDYRDLNDQFDRIVSVGMFEHVGPKNYNTYFDVVDRNLKPDGLFLLHTIGSKKTDHN
+ VDPWINKYIFPNGCLPSVRQIAEASESHFVMEDWHNFGADYDTTLMAWHERFINAWPE
+ IAGNYNERFKRMFSYYLNACAGAFRARDIQLWQVVFTRGVENGLRVPR"
+ misc_feature 1511386..1512531
+ /locus_tag="SARI_01555"
+ /note="cyclopropane fatty acyl phospholipid synthase;
+ Provisional; Region: PRK11705"
+ /db_xref="CDD:183282"
+ misc_feature 1511737..>1512018
+ /locus_tag="SARI_01555"
+ /note="S-adenosylmethionine-dependent methyltransferases
+ (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
+ that use S-adenosyl-L-methionine (SAM or AdoMet) as a
+ substrate for methyltransfer, creating the product
+ S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
+ cl17173"
+ /db_xref="CDD:247727"
+ misc_feature 1511893..1512183
+ /locus_tag="SARI_01555"
+ /note="S-adenosylmethionine-dependent methyltransferases
+ (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
+ that use S-adenosyl-L-methionine (SAM or AdoMet) as a
+ substrate for methyltransfer, creating the product
+ S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
+ cd02440"
+ /db_xref="CDD:100107"
+ misc_feature order(1511905..1511925,1511974..1511979,1512043..1512051,
+ 1512088..1512090)
+ /locus_tag="SARI_01555"
+ /note="S-adenosylmethionine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:100107"
+ gene complement(1512575..1513216)
+ /locus_tag="SARI_01556"
+ CDS complement(1512575..1513216)
+ /locus_tag="SARI_01556"
+ /inference="protein motif:BlastProDom:IPR001783"
+ /inference="protein motif:HMMPanther:IPR001783"
+ /inference="protein motif:HMMPfam:IPR001783"
+ /inference="protein motif:HMMTigr:IPR001783"
+ /inference="similar to AA sequence:REFSEQ:NP_460389.1"
+ /note="'catalyzes the formation of riboflavin from
+ 6,7-dimethyl-8-(1-D-ribityl)lumazine'"
+ /codon_start=1
+ /transl_table=11
+ /product="riboflavin synthase subunit alpha"
+ /protein_id="YP_001570594.1"
+ /db_xref="GI:161503482"
+ /db_xref="InterPro:IPR001783"
+ /translation="MFTGIVQGTAKLVLIDEKPNFRTHVVTLPDHMLEGLETGASVAN
+ NGCCLTVTEINGNQISFDLMKETLRITNLGALKVGDEVNVERAAKFSDEIGGHLMSGH
+ IITTAEITKILTSENNHQVWFKVQDASLMKYILYKGFIGVDGISLTVGEVTPTRFCVY
+ LIPETLERTTLGRKKLGERVNIEIDPQTQAIVDTVERVLAARENAVRTQADNS"
+ misc_feature complement(1512602..1513216)
+ /locus_tag="SARI_01556"
+ /note="riboflavin synthase subunit alpha; Provisional;
+ Region: PRK13020"
+ /db_xref="CDD:183846"
+ misc_feature complement(1512956..1513210)
+ /locus_tag="SARI_01556"
+ /note="Lumazine binding domain; Region: Lum_binding;
+ pfam00677"
+ /db_xref="CDD:201387"
+ misc_feature complement(1512662..1512919)
+ /locus_tag="SARI_01556"
+ /note="Lumazine binding domain; Region: Lum_binding;
+ pfam00677"
+ /db_xref="CDD:201387"
+ unsure 1512843..1512869
+ /note="Sequence derived from one plasmid subclone"
+ unsure 1513246..1513408
+ /note="Sequence derived from one plasmid subclone"
+ gene 1513432..1514805
+ /locus_tag="SARI_01557"
+ CDS 1513432..1514805
+ /locus_tag="SARI_01557"
+ /inference="protein motif:HMMPfam:IPR002528"
+ /inference="protein motif:HMMTigr:IPR002528"
+ /inference="similar to AA sequence:REFSEQ:NP_456105.1"
+ /note="NorM; MdtK; functions as a Na(+)/drug antiporter;
+ inactivation in Vibrio cholerae results in susceptibility
+ to fluoroquinolones"
+ /codon_start=1
+ /transl_table=11
+ /product="multidrug efflux protein"
+ /protein_id="YP_001570595.1"
+ /db_xref="GI:161503483"
+ /db_xref="InterPro:IPR002528"
+ /translation="MQKYTSEARQLLALAIPVILAQVAQTAMGFVDTVMAGGYSATDM
+ AAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLASFVSVLV
+ MIVLWNAGYIIRSMHNIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPG
+ MVMGFLGLLVNIPVNYIFIYGHFGMPELGGIGCGVATAAVYWVMFIAMLSYIKHARSM
+ RDIRNEKSFGKPDSAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVNVAGHQI
+ ALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLSVGVCMAVVTAIFTV
+ TLRKHIALLYNDNPEVVSLAAQLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFFITF
+ TAYWVLGLPSGYILALTDLVVDRMGPAGFWMGFIIGLTSAAVLMMLRMRYLQRQPSSI
+ ILQRAAR"
+ misc_feature 1513432..1514802
+ /locus_tag="SARI_01557"
+ /note="multidrug efflux protein; Reviewed; Region:
+ PRK01766"
+ /db_xref="CDD:234981"
+ misc_feature 1513450..1514766
+ /locus_tag="SARI_01557"
+ /note="Subfamily of the multidrug and toxic compound
+ extrusion (MATE)-like proteins similar to Vibrio cholerae
+ NorM; Region: MATE_NorM_like; cd13131"
+ /db_xref="CDD:240536"
+ misc_feature order(1514185..1514187,1514197..1514199,1514275..1514277,
+ 1514284..1514286,1514521..1514523,1514533..1514535,
+ 1514614..1514616,1514704..1514706,1514716..1514718)
+ /locus_tag="SARI_01557"
+ /note="cation binding site [ion binding]; other site"
+ /db_xref="CDD:240536"
+ gene 1514957..1515030
+ /locus_tag="SARI_01558"
+ tRNA 1514957..1515030
+ /locus_tag="SARI_01558"
+ /product="tRNA-Val"
+ unsure 1514967..1515143
+ /note="Sequence derived from one plasmid subclone"
+ gene 1515044..1515117
+ /locus_tag="SARI_01559"
+ tRNA 1515044..1515117
+ /locus_tag="SARI_01559"
+ /product="tRNA-Val"
+ gene complement(1515302..1516357)
+ /locus_tag="SARI_01560"
+ CDS complement(1515302..1516357)
+ /locus_tag="SARI_01560"
+ /inference="protein motif:FPrintScan:IPR006135"
+ /inference="protein motif:HMMPfam:IPR006135"
+ /inference="protein motif:HMMTigr:IPR006307"
+ /inference="similar to AA sequence:REFSEQ:NP_456106.1"
+ /note="'member of a type III secretion system which is
+ part of a pathogenicity island in Salmonella, Yersinia and
+ pathogenic Escherichia coli'"
+ /codon_start=1
+ /transl_table=11
+ /product="secretion system apparatus protein SsaU"
+ /protein_id="YP_001570596.1"
+ /db_xref="GI:161503484"
+ /db_xref="InterPro:IPR006135"
+ /db_xref="InterPro:IPR006307"
+ /translation="MSEKTEQPTEKKLRDGRKEGQVVKSIEITSLFQLIALFLYFHFL
+ TEKVILRIIELINFTLQLINKPFSYALTQLSYSLVDSLSSVILFLGAGIIISTVASVF
+ LQVGVVIASKAIGFKSDHINPVSNFKQIFSLHSVVELCKSTLKVIILSLILAFFFYYY
+ VSTFRALPYCGLACALPVVFCLIKWLWVGVMAFYIVVGILDYSFQYYKIRKDLKMSKD
+ DVKQEHKDLEGDPQMKTRRREMQSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTD
+ MPIPRVLEKGSDAQANYIVNIAERNCIPVVENVDLARSLFFEVERGDKIPETLFEPVA
+ ALLRMVMKIDYAHSTET"
+ misc_feature complement(1515311..1516357)
+ /locus_tag="SARI_01560"
+ /note="secretion system apparatus protein SsaU; Reviewed;
+ Region: PRK12721"
+ /db_xref="CDD:183700"
+ misc_feature complement(1515326..1515559)
+ /locus_tag="SARI_01560"
+ /note="Uncharacterized homolog of the cytoplasmic domain
+ of flagellar protein FhlB [Function unknown]; Region:
+ COG2257; cl15822"
+ /db_xref="CDD:247086"
+ gene complement(1516354..1517133)
+ /locus_tag="SARI_01561"
+ CDS complement(1516354..1517133)
+ /locus_tag="SARI_01561"
+ /inference="protein motif:HMMPfam:IPR002010"
+ /inference="protein motif:HMMTigr:IPR006304"
+ /inference="similar to AA sequence:REFSEQ:NP_456107.1"
+ /note="'COG: COG4791 Type III secretory pathway, component
+ EscT;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570597.1"
+ /db_xref="GI:161503485"
+ /db_xref="InterPro:IPR002010"
+ /db_xref="InterPro:IPR006304"
+ /translation="MTQQLNEWIIVLAVAFIRPLGLSLLLPLLKSGSLGTELLRNGVL
+ ISLTFPVLPIIYQQHIFMHVGKDYSWLGLITGEIIIGFLIGFCAAVPFWAVDMAGFLL
+ DTLRGATMGAIFNSTMEAETSLFGLLFSQFLCMIFFISGGMEFILNILYESYQYLPPG
+ RTLLFDRQFLKYIQVEWRTLYQLCISFSLPAIICMVLADLALGLLNRSAQQLNVFFFS
+ MPLKSILVLLMLLISFPYALHHYLVESDKFYIYLKNWFPSV"
+ misc_feature complement(1516357..1517133)
+ /locus_tag="SARI_01561"
+ /note="type III secretion system protein SsaT;
+ Provisional; Region: PRK15349"
+ /db_xref="CDD:185247"
+ gene complement(1517134..1517400)
+ /locus_tag="SARI_01562"
+ CDS complement(1517134..1517400)
+ /locus_tag="SARI_01562"
+ /inference="protein motif:FPrintScan:IPR002191"
+ /inference="protein motif:HMMPfam:IPR002191"
+ /inference="protein motif:HMMTigr:IPR006306"
+ /inference="similar to AA sequence:REFSEQ:NP_460385.1"
+ /note="'COG: COG4794 Type III secretory pathway, component
+ EscS;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570598.1"
+ /db_xref="GI:161503486"
+ /db_xref="InterPro:IPR002191"
+ /db_xref="InterPro:IPR006306"
+ /translation="MNDSELTQFVTQLLWIVLFTSMPVVLVASVVGVIVSLVQALTQI
+ QDQTLQFMIKLLAIATTLMVSYPWLSGILLNYTRQIMLRIGEHG"
+ misc_feature complement(1517137..1517400)
+ /locus_tag="SARI_01562"
+ /note="type III secretion system protein SsaS;
+ Provisional; Region: PRK15350"
+ /db_xref="CDD:185248"
+ gene complement(1517397..1518044)
+ /locus_tag="SARI_01563"
+ CDS complement(1517397..1518044)
+ /locus_tag="SARI_01563"
+ /inference="protein motif:BlastProDom:IPR005838"
+ /inference="protein motif:HMMPfam:IPR005838"
+ /inference="protein motif:HMMTigr:IPR005773"
+ /inference="protein motif:ScanRegExp:IPR005838"
+ /inference="similar to AA sequence:INSD:AAL20343.1"
+ /note="part of a set of proteins involved in the infection
+ of eukaryotic cells; in plant pathogens involved in the
+ hypersensitivity response"
+ /codon_start=1
+ /transl_table=11
+ /product="type III secretion system protein"
+ /protein_id="YP_001570599.1"
+ /db_xref="GI:161503487"
+ /db_xref="InterPro:IPR005773"
+ /db_xref="InterPro:IPR005838"
+ /translation="MSLPDSPLQLIGILFLLSILPLIIVMGTSFLKLAVVFSILRNAL
+ GIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVADAPFWMSEWDSKALAPYR
+ QFLQKNSEEKEASYFRNLIKRTWPEDIKRKIKPDSLLILIPAFTVSQLTQAFRIGLLI
+ YLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTLAQLVQSFS"
+ misc_feature complement(1517400..1517972)
+ /locus_tag="SARI_01563"
+ /note="Type III secretory pathway, component EscR
+ [Intracellular trafficking and secretion]; Region: EscR;
+ COG4790"
+ /db_xref="CDD:227128"
+ gene complement(1518110..1519078)
+ /locus_tag="SARI_01564"
+ CDS complement(1518110..1519078)
+ /locus_tag="SARI_01564"
+ /inference="protein motif:BlastProDom:IPR001543"
+ /inference="protein motif:HMMPfam:IPR001543"
+ /inference="protein motif:HMMTigr:IPR013385"
+ /inference="similar to AA sequence:REFSEQ:NP_456110.1"
+ /note="'COG: COG1886 Flagellar motor switch/type III
+ secretory pathway protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="type III secretion system protein"
+ /protein_id="YP_001570600.1"
+ /db_xref="GI:161503488"
+ /db_xref="InterPro:IPR001543"
+ /db_xref="InterPro:IPR013385"
+ /translation="MLTIANEERPWMDILPTEGATIGELTLRMQEYPVQEGILFTINY
+ NNELGRVWIAEQCWLRWCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQKE
+ PPTFCSNVPHQLTLNIKWIVEEHEFHSIIFKWPTAFLQNIVGELSAERQQIYPAPPIV
+ VPVYLGWCHLTLTELESIEIGMGIRIHCFGDVRIGCFVIQLPGRIYARVLLTEDNMMK
+ FDELVQDIETLLAQEGPILKSDIASSVELEQLPQSVLFEIGRASVEIGQLRQLKAGDV
+ LPVGGCFAPEVTIRLNGRVIGQGELIACGNEFMVRITRWYLSKNTV"
+ misc_feature complement(1518113..1519078)
+ /locus_tag="SARI_01564"
+ /note="type III secretion system protein SsaQ; Validated;
+ Region: PRK08035"
+ /db_xref="CDD:181204"
+ misc_feature complement(1518134..>1518400)
+ /locus_tag="SARI_01564"
+ /note="Flagellar motor switch/type III secretory pathway
+ protein [Cell motility and secretion / Intracellular
+ trafficking and secretion]; Region: FliN; COG1886"
+ /db_xref="CDD:224798"
+ gene complement(1519059..1519430)
+ /locus_tag="SARI_01565"
+ CDS complement(1519059..1519430)
+ /locus_tag="SARI_01565"
+ /inference="similar to AA sequence:REFSEQ:YP_150687.1"
+ /note="'COG: NOG24542 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570601.1"
+ /db_xref="GI:161503489"
+ /translation="MRITKVEGSLGLPRKSYQDDNEAEAGRTDFEQLMYQALPIGENN
+ LVALNKNVVFTQCYRVSGGYLDGVECEVCESGGLIQLKINVPHHEVYRSMKTLKQWLE
+ SQLLNIGYVISLEIFYVNNSE"
+ misc_feature complement(1519062..1519430)
+ /locus_tag="SARI_01565"
+ /note="type III secretion system protein SsaP;
+ Provisional; Region: PRK15351"
+ /db_xref="CDD:185249"
+ gene complement(1519411..1519794)
+ /locus_tag="SARI_01566"
+ CDS complement(1519411..1519794)
+ /locus_tag="SARI_01566"
+ /inference="similar to AA sequence:REFSEQ:YP_216424.1"
+ /note="'COG: NOG23008 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570602.1"
+ /db_xref="GI:161503490"
+ /translation="MILETLLEIIARREKQLRGKLAVLDQQQQALISEQQVCQTRALA
+ VNARLKELTDWQGTLSCHLLLDKKLQMARLFTQAQSFLTQRQQLDNQYQQLVSQQSKL
+ QENVNALMKRKEKITMVLNDAYYQS"
+ misc_feature complement(1519414..1519788)
+ /locus_tag="SARI_01566"
+ /note="type III secretion system protein SsaO;
+ Provisional; Region: PRK15352"
+ /db_xref="CDD:185250"
+ gene complement(1519791..1521092)
+ /locus_tag="SARI_01567"
+ CDS complement(1519791..1521092)
+ /locus_tag="SARI_01567"
+ /inference="protein motif:HMMPfam:IPR000194"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR005714"
+ /inference="protein motif:HMMTigr:IPR013380"
+ /inference="protein motif:superfamily:IPR004100"
+ /inference="similar to AA sequence:INSD:AAO68935.1"
+ /note="'KEGG: stt:t1283 5.1e-215 ssaN; putative type III
+ secretion ATP synthase K03224;
+ COG: COG1157 Flagellar biosynthesis/type III secretory
+ pathway ATPase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="type III secretion system ATPase"
+ /protein_id="YP_001570603.1"
+ /db_xref="GI:161503491"
+ /db_xref="InterPro:IPR000194"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR004100"
+ /db_xref="InterPro:IPR005714"
+ /db_xref="InterPro:IPR013380"
+ /translation="MKNELMQCLRLKYPPPDGYRRWGRIQDISATLLNAWLPGVFMGE
+ LCCIKPGGEFAEVVGINGSKALLSPFTSTVGLHCGQQVMALRRRHQVPVGEVLLGRVI
+ DGFGRPLDGSELPEVCWKDYDAMPPPAMVRRPMTQPLMTGIRAIDSVATCGEGQRVGI
+ FSAPGVGKSTLLAMLCNAPGADVNVLVLIGERGREVREFIDFTLTKESRKRCVIVVAT
+ SDRPALERVRALFVATTIAEFFRDHGKRVVLLADSLTRYARAAREIALAAGETAVSGE
+ YPPGVFSALPRLLERTGMGEKGSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRR
+ LAEMGHYPAIDVLATLSRVFPAVTSPEHRQLATTLRRHLALYQDVELLIRIGEYQRGV
+ DAAADKAIDTYPNICTFLRQSKDEVCGPELLIEKLQQILTE"
+ misc_feature complement(1519794..1521092)
+ /locus_tag="SARI_01567"
+ /note="type III secretion system ATPase SsaN; Validated;
+ Region: PRK07594"
+ /db_xref="CDD:136438"
+ misc_feature complement(1519857..1520828)
+ /locus_tag="SARI_01567"
+ /note="RecA-like NTPases. This family includes the NTP
+ binding domain of F1 and V1 H+ATPases, DnaB and related
+ helicases as well as bacterial RecA and related eukaryotic
+ and archaeal recombinases. This group also includes
+ bacterial conjugation proteins and...; Region:
+ RecA-like_NTPases; cl17233"
+ /db_xref="CDD:247787"
+ misc_feature complement(order(1520586..1520594,1520604..1520609))
+ /locus_tag="SARI_01567"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:238540"
+ misc_feature complement(order(1520334..1520339,1520526..1520531,
+ 1520535..1520537,1520586..1520594,1520604..1520606))
+ /locus_tag="SARI_01567"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238540"
+ misc_feature complement(1520337..1520351)
+ /locus_tag="SARI_01567"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:238540"
+ gene complement(1521082..1523058)
+ /locus_tag="SARI_01568"
+ CDS complement(1521082..1523058)
+ /locus_tag="SARI_01568"
+ /inference="protein motif:FPrintScan:IPR001712"
+ /inference="protein motif:HMMPfam:IPR001712"
+ /inference="protein motif:HMMTigr:IPR006302"
+ /inference="protein motif:ScanRegExp:IPR001712"
+ /note="with SsaC forms part of a protein export system
+ across the inner and outer cell membranes; part of the
+ Salmonella pathogenicity island 2; part of the type III
+ secretion system"
+ /codon_start=1
+ /transl_table=11
+ /product="secretion system apparatus protein SsaV"
+ /protein_id="YP_001570604.1"
+ /db_xref="GI:161503492"
+ /db_xref="InterPro:IPR001712"
+ /db_xref="InterPro:IPR006302"
+ /translation="MVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYL
+ SDPLDLSVFPSLLLITTLYRLSLTISTSRLVLLQHNAGNIVDAFGRFVVGGNLTVGLV
+ VFTIITIVQFIVITKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQ
+ HVQQESRFLGAMDGAMKFVKGDTIAGIIVVLVNIIGGIIIAIVQYDMSMSEAVHTYSV
+ LSIGDGLCGQIPSLLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLM
+ LLAFIPGFPFIILAFFSALLALPIILIRRKKAVVSVSGAEAQEKDSMVPGACPLILRL
+ TPTLHSADLIRDIDAMRWLVFEDTGVPLPEVNIEVLPEPTEKLTVLLYQEPVFSLSIP
+ TQADYLLIGADASVVGESQTLPNGMGQICWLSKDMGNKAQGFGLEVFAGSQRISALLK
+ CALLRHMGEFIGVQETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIR
+ DLRLIFGTLIDWAPREKDVLMLTEYVRIALRRHILRRLNPEGKPLPILRIGEGIENLV
+ RESIRQTAMGTYTALSSRHKSQILQLIEQALKRSAKLFIVTSVDTRRFLRKITEATLF
+ DVPILSWQELGEECFVQVVESIDLSEEELADNEE"
+ misc_feature complement(1521103..1523058)
+ /locus_tag="SARI_01568"
+ /note="secretion system apparatus protein SsaV;
+ Provisional; Region: PRK12720"
+ /db_xref="CDD:183699"
+ misc_feature complement(1521148..1523028)
+ /locus_tag="SARI_01568"
+ /note="FHIPEP family; Region: FHIPEP; pfam00771"
+ /db_xref="CDD:216110"
+ gene complement(1523538..1524530)
+ /locus_tag="SARI_01569"
+ CDS complement(1523538..1524530)
+ /locus_tag="SARI_01569"
+ /inference="protein motif:HMMPfam:IPR009747"
+ /inference="protein motif:HMMTigr:IPR013351"
+ /inference="similar to AA sequence:REFSEQ:NP_460377.1"
+ /note="'COG: NOG09839 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570605.1"
+ /db_xref="GI:161503493"
+ /db_xref="InterPro:IPR009747"
+ /db_xref="InterPro:IPR013351"
+ /translation="MDIKINEIKIMPPTEFTPDQLIEEKEINSPSMLALQELQETTGT
+ ALYETMEEIGMALSGKLREKYKLIDAEKLERRQQALLRLLKQIQEDNGATLRPLAEEN
+ SDPNLQNAYQIISLAMALTDSGLSKKKKRALQAQLDTLTAEEGWELAVFSLMELGEVD
+ TATLASLKRFMQQAIDNDEMPLSQWFRRVADWPDRCERVRILLRAIAFELSICIEPSQ
+ QSRLAAALVRLRRLLLFLGLEKECQREELICQLPPNTLLTLLLDIICERWLFSDWLLD
+ RLTAVVSSSRMFNRLLQQLDAQFMLIPDNCFNDEDQREQILETLRELKVNQVLF"
+ misc_feature complement(1523547..1524524)
+ /locus_tag="SARI_01569"
+ /note="type III secretion system protein SsaL;
+ Provisional; Region: PRK15345"
+ /db_xref="CDD:237949"
+ misc_feature complement(1523952..1524386)
+ /locus_tag="SARI_01569"
+ /note="HrpJ-like domain; Region: HrpJ; cl15454"
+ /db_xref="CDD:246967"
+ misc_feature complement(1523562..1523744)
+ /locus_tag="SARI_01569"
+ /note="TyeA; Region: TyeA; cl07611"
+ /db_xref="CDD:141982"
+ gene complement(1524520..1525194)
+ /locus_tag="SARI_01570"
+ CDS complement(1524520..1525194)
+ /locus_tag="SARI_01570"
+ /inference="protein motif:HMMTigr:IPR012842"
+ /inference="similar to AA sequence:INSD:AAO68931.1"
+ /note="'COG: NOG14113 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570606.1"
+ /db_xref="GI:161503494"
+ /db_xref="InterPro:IPR012842"
+ /translation="MSFTSLPLTEINHKLPARNIIESQWITLQLTLFAQEQQANSVSH
+ AIVNAAYRKAEKIIRDAYRSQRQQKMEQQQEIERLRKHTLEELEAEWLERHVKYLLED
+ ESQFRSLVDQAAHHIKNSIEQVLMSWFEQQSVDSVMCHRLARQAMTIAEEGGLYLHIH
+ PEKEALMRETFGKRFTLIIEPGFSTDQAELSSTRYSVEFSLSRHFNALLKWLRNGEDY
+ RGGDGY"
+ misc_feature complement(1524523..1525194)
+ /locus_tag="SARI_01570"
+ /note="type III secretion system protein SsaK;
+ Provisional; Region: PRK15354"
+ /db_xref="CDD:185252"
+ misc_feature complement(1524577..1525116)
+ /locus_tag="SARI_01570"
+ /note="type III secretion apparatus protein, HrpE/YscL
+ family; Region: HrpE_YscL_not; TIGR02499"
+ /db_xref="CDD:233897"
+ gene complement(1525191..1525520)
+ /locus_tag="SARI_01571"
+ CDS complement(1525191..1525520)
+ /locus_tag="SARI_01571"
+ /inference="similar to AA sequence:INSD:AAO68930.1"
+ /note="'COG: NOG12246 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570607.1"
+ /db_xref="GI:161503495"
+ /translation="MSAFAFGLGLFKLRCSDYFMLPEYRQLLLQWFSEDEIWQLYGWL
+ GQRDGKLLSPQAMLQTALQIGTAILNREAYDDVVLHALLVLLPPPQRALWPKTSLNEI
+ IFMEHLL"
+ misc_feature complement(1525293..>1525520)
+ /locus_tag="SARI_01571"
+ /note="Type III secretion system subunit; Region:
+ T3SS_LEE_assoc; pfam13327"
+ /db_xref="CDD:205507"
+ gene complement(1525757..1526506)
+ /locus_tag="SARI_01572"
+ CDS complement(1525757..1526506)
+ /locus_tag="SARI_01572"
+ /inference="protein motif:HMMPfam:IPR006182"
+ /inference="protein motif:HMMTigr:IPR003282"
+ /inference="similar to AA sequence:INSD:CAD01956.1"
+ /note="'COG: COG4669 Type III secretory pathway,
+ lipoprotein EscJ;
+ Psort location: extracellular, including cell wall, score:
+ 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570608.1"
+ /db_xref="GI:161503496"
+ /db_xref="InterPro:IPR003282"
+ /db_xref="InterPro:IPR006182"
+ /translation="MKVHRILFLTALAFLLTGCDVDLYRSLPEDEANQMLALLMQHHI
+ NAEKKQEENGITLRVEQSQFINAVELLRLNGYPHRQFMTADKMFPANQLVVSPQEEQQ
+ KINFLKEQRIEGMLSQMEGVINTKVTIALPIYDEGSNYSPSSVAVFIKYSPQVNMEAL
+ RIKIKDLIEKSIPGLQYGRISILMQPAEFRMVPDAPARQTFSMMDVISANKEKVVKWL
+ IKYPYQLMLSLTGLLLGVGIVIGYFWLRRRF"
+ misc_feature complement(1525760..1526506)
+ /locus_tag="SARI_01572"
+ /note="type III secretion system lipoprotein SsaJ;
+ Provisional; Region: PRK15348"
+ /db_xref="CDD:185246"
+ gene complement(1526503..1526724)
+ /locus_tag="SARI_01573"
+ CDS complement(1526503..1526724)
+ /locus_tag="SARI_01573"
+ /inference="protein motif:HMMTigr:IPR012670"
+ /inference="similar to AA sequence:REFSEQ:YP_216416.1"
+ /note="'COG: NOG38377 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570609.1"
+ /db_xref="GI:161503497"
+ /db_xref="InterPro:IPR012670"
+ /translation="MPSTDSGQEHQEQVNLFKQLLTDGMSTSKDDVLLPQVMLARQMN
+ YMELTVDMDFLARISGSTSQALNKLVSMT"
+ misc_feature complement(1526506..1526724)
+ /locus_tag="SARI_01573"
+ /note="type III secretion system protein SsaI;
+ Provisional; Region: PRK15355"
+ /db_xref="CDD:185253"
+ gene complement(1526775..1527002)
+ /locus_tag="SARI_01574"
+ CDS complement(1526775..1527002)
+ /locus_tag="SARI_01574"
+ /inference="protein motif:HMMTigr:IPR010437"
+ /inference="similar to AA sequence:INSD:AAL20331.1"
+ /note="'COG: NOG22388 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570610.1"
+ /db_xref="GI:161503498"
+ /db_xref="InterPro:IPR010437"
+ /translation="MFAGVNHSLISQVHAMLPALSVIVPDKKLQLVCLALLLAGLNEP
+ LKAGEILAGIDLPEAMALRLLFPAPNEELKN"
+ misc_feature complement(1526778..1527002)
+ /locus_tag="SARI_01574"
+ /note="type III secretion system protein SsaH;
+ Provisional; Region: PRK15356"
+ /db_xref="CDD:185254"
+ gene complement(1527043..1527258)
+ /locus_tag="SARI_01575"
+ CDS complement(1527043..1527258)
+ /locus_tag="SARI_01575"
+ /inference="protein motif:HMMTigr:IPR011841"
+ /inference="similar to AA sequence:INSD:AAO68926.1"
+ /note="'COG: NOG18517 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570611.1"
+ /db_xref="GI:161503499"
+ /db_xref="InterPro:IPR011841"
+ /translation="MDIGQLVDMLSHMARQAGEAINDKMNGNDLLNPESMIKVQFALQ
+ QYSTFINYESSMIKMIKDMLSGIIAKI"
+ misc_feature complement(1527046..1527258)
+ /locus_tag="SARI_01575"
+ /note="type III secretion system needle protein SsaG;
+ Provisional; Region: PRK15344"
+ /db_xref="CDD:185242"
+ gene complement(1527355..1527945)
+ /locus_tag="SARI_01576"
+ CDS complement(1527355..1527945)
+ /locus_tag="SARI_01576"
+ /inference="similar to AA sequence:REFSEQ:YP_216413.1"
+ /note="'COG: NOG26042 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570612.1"
+ /db_xref="GI:161503500"
+ /translation="MDVEIGRIGPEQGKERLLTGFAKRAIAVFPKEIFNWQMVILGGQ
+ VLCCSAGIALTVLSGGGVPLLALAGVGLAIAIADVACLIYHHKHNLPMAHDSIGNAVF
+ YIANCFISQRSSMALAKAVSLGGRVALTATVMTHSYWCSTLGLQSHLLERINDITYGL
+ MRFTRFGMDGMSMTGMQVSSPLYRLLAQVRPEKSVP"
+ misc_feature complement(1527358..1527945)
+ /locus_tag="SARI_01576"
+ /note="pathogenicity island 2 effector protein SseG;
+ Provisional; Region: PRK15357"
+ /db_xref="CDD:185255"
+ gene complement(1528044..1528769)
+ /locus_tag="SARI_01577"
+ CDS complement(1528044..1528769)
+ /locus_tag="SARI_01577"
+ /inference="similar to AA sequence:INSD:AAV77388.1"
+ /note="'COG: NOG26742 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570613.1"
+ /db_xref="GI:161503501"
+ /translation="MQAEGASFLPPEIPAPDTPTTPVLLTPEQIKQQRDYAMHFIQYT
+ IRALGAAVVFGLSIAAAVISGGAGLPILILAGVALVIATGDACCAYHNYQLICHQKEP
+ LQTASDSVAFVVSKLSLECGASLNCANTLANCLSLLIRSGIAISSLVIPIQFPLPAAD
+ NIAASLVMGTVITSASLTAIGAVLDYCRVRPQNADQEITFDERPADPCVLLAEKITEF
+ CQSDTPPALMECIDNGYRGEGGP"
+ misc_feature complement(1528056..1528769)
+ /locus_tag="SARI_01577"
+ /note="pathogenicity island 2 effector protein SseF;
+ Provisional; Region: PRK15358"
+ /db_xref="CDD:185256"
+ gene complement(1528848..1529276)
+ /locus_tag="SARI_01578"
+ CDS complement(1528848..1529276)
+ /locus_tag="SARI_01578"
+ /inference="protein motif:Gene3D:IPR011990"
+ /inference="protein motif:HMMTigr:IPR005415"
+ /inference="similar to AA sequence:INSD:AAC28884.1"
+ /note="'KEGG: ter:Tery_0416 8.9e-07 1-deoxy-D-xylulose
+ 5-phosphate reductoisomerase K00099;
+ COG: COG0457 FOG: TPR repeat;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570614.1"
+ /db_xref="GI:161503502"
+ /db_xref="InterPro:IPR005415"
+ /db_xref="InterPro:IPR011990"
+ /translation="MKENQKNKVPEEILKQLLSVDPETVYAKGYASWQEGDYSRALID
+ FSWLVMAQPWSWRAHIALAGTWMMLKEYSTAINFYGHALMLDASHPEPVYQTGVCLKM
+ MGEPGLAREAFQTAIKMSYADASWSEIRQNAQIMFDTLVT"
+ misc_feature complement(1528851..1529276)
+ /locus_tag="SARI_01578"
+ /note="type III secretion system chaperone protein SscB;
+ Provisional; Region: PRK15359"
+ /db_xref="CDD:185257"
+ misc_feature complement(1528923..1529210)
+ /locus_tag="SARI_01578"
+ /note="Tetratricopeptide repeat domain; typically contains
+ 34 amino acids
+ [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
+ X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
+ a variety of organisms including bacteria, cyanobacteria,
+ yeast, fungi; Region: TPR; cd00189"
+ /db_xref="CDD:238112"
+ misc_feature complement(order(1528968..1528973,1528980..1528985,
+ 1528992..1528997,1529073..1529078,1529085..1529090,
+ 1529094..1529099,1529184..1529189,1529196..1529201,
+ 1529205..1529210))
+ /locus_tag="SARI_01578"
+ /note="binding surface"
+ /db_xref="CDD:238112"
+ misc_feature complement(order(1528929..1528931,1528938..1528940,
+ 1528950..1528952,1528986..1528988,1529031..1529033,
+ 1529040..1529042,1529052..1529054,1529088..1529090,
+ 1529133..1529135,1529142..1529144,1529154..1529156,
+ 1529190..1529192))
+ /locus_tag="SARI_01578"
+ /note="TPR motif; other site"
+ /db_xref="CDD:238112"
+ gene complement(1529331..1529747)
+ /locus_tag="SARI_01579"
+ CDS complement(1529331..1529747)
+ /locus_tag="SARI_01579"
+ /inference="similar to AA sequence:INSD:CAD01963.1"
+ /note="'COG: NOG20797 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570615.1"
+ /db_xref="GI:161503503"
+ /translation="MQEIEQWLHRHQVLTEPAYLGETSIFLGQQFILSPYLVVYRIEA
+ EEMIICEFRRLTPGQPRPQQLFHLLGLLRGIFVHHPQLKYLKMLIITDVLDEKQSMLR
+ RKLLRILTAMGATYTMLDGDKWTILSAEQLIQRHFK"
+ misc_feature complement(1529337..1529747)
+ /locus_tag="SARI_01579"
+ /note="pathogenicity island 2 effector protein SseE;
+ Provisional; Region: PRK15360"
+ /db_xref="CDD:185258"
+ gene complement(1529752..1530255)
+ /locus_tag="SARI_01580"
+ CDS complement(1529752..1530255)
+ /locus_tag="SARI_01580"
+ /inference="similar to AA sequence:REFSEQ:YP_216409.1"
+ /note="'COG: NOG18516 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570616.1"
+ /db_xref="GI:161503504"
+ /translation="MDAESLLWLFDKIWETLIELAKKLRNIMRAYNVVKQQLSWELQV
+ NAFNTQLKTIDQTYKASILNGVGSICSGMLTIGFGVTGGEAGVMFGQGAGHIAAGGFS
+ LGGSAAQRQSDQTSTIAELQQKGAQSYSKTLTEIMDKAADIMQQIMGMGTSLVDVLAH
+ ILQSLTR"
+ misc_feature complement(1529755..1530255)
+ /locus_tag="SARI_01580"
+ /note="pathogenicity island 2 effector protein SseD;
+ Provisional; Region: PRK15361"
+ /db_xref="CDD:185259"
+ gene complement(1530355..1531692)
+ /locus_tag="SARI_01581"
+ CDS complement(1530355..1531692)
+ /locus_tag="SARI_01581"
+ /inference="protein motif:HMMPfam:IPR006972"
+ /inference="similar to AA sequence:INSD:AAV77392.1"
+ /note="'COG: COG5613 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570617.1"
+ /db_xref="GI:161503505"
+ /db_xref="InterPro:IPR006972"
+ /translation="MDFAFGNGNAMCAVTRKISLQEANNALKKLLDAVPGNHKSPPLP
+ DFLRINPTVLSMMMTILILNVFGSSAQSLCQQLERATEVQNTLRDKQVKEYQEQIQKA
+ IEQADKARKAGIFGAIFDWITGIFETVIGAFKVVEGFLSDNPVEMASGVAYMAAGCAG
+ MVKAGAETAMLFGADPDTCKAIINVTSKIQLGCEIVALALDVIQIGRAFMATRALSGA
+ AEKVLDSGFGEELAERMAGAGEEEIDALAEEFGRQVSENFSRQFESFDREMVELGEME
+ EESAEFSRTAEKNMTRRAGKSFTKEGVKAMVKEAAKEALEKCAQEGEKFLLKNIRKQI
+ LVNVFKKIMSALLRDCSCKSLQAIRCATEGGNQTNAGVIKTEKAKLEKKIEQLIARQQ
+ FQDFIMEQMEGQKKMEQKRLQALYKGSGAALKDTLDIIDDYSSVQAKIAGWRA"
+ misc_feature complement(1530358..1531692)
+ /locus_tag="SARI_01581"
+ /note="pathogenicity island 2 effector protein SseC;
+ Provisional; Region: PRK15362"
+ /db_xref="CDD:237952"
+ gene complement(1531812..1532285)
+ /locus_tag="SARI_01582"
+ CDS complement(1531812..1532285)
+ /locus_tag="SARI_01582"
+ /inference="protein motif:Gene3D:IPR011990"
+ /inference="protein motif:HMMPfam:IPR011716"
+ /inference="protein motif:HMMPfam:IPR013105"
+ /inference="protein motif:HMMTigr:IPR005415"
+ /inference="similar to AA sequence:REFSEQ:YP_150705.1"
+ /note="'COG: COG0457 FOG: TPR repeat;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570618.1"
+ /db_xref="GI:161503506"
+ /db_xref="InterPro:IPR005415"
+ /db_xref="InterPro:IPR011716"
+ /db_xref="InterPro:IPR011990"
+ /db_xref="InterPro:IPR013105"
+ /translation="MKKEPTLQQVYDTMRFFRRGGSLRMLLDDDVTQPLNTLYRYAMQ
+ LMEVQEFSGAARLFQLLTIYDAWSFDYWFRLGECCQAQKLWGEAIYAYGRAAQIKLDA
+ PQAPWAAAECYLACDNVRYARKALKAVVRICGEASEHHILRLRAEKMLQQLSDRS"
+ misc_feature complement(1531815..1532285)
+ /locus_tag="SARI_01582"
+ /note="pathogenicity island 2 chaperone protein SscA;
+ Provisional; Region: PRK15363"
+ /db_xref="CDD:185261"
+ gene complement(1532282..1532878)
+ /locus_tag="SARI_01583"
+ CDS complement(1532282..1532878)
+ /locus_tag="SARI_01583"
+ /inference="protein motif:HMMPfam:IPR005095"
+ /inference="similar to AA sequence:REFSEQ:YP_216406.1"
+ /note="'COG: NOG20796 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570619.1"
+ /db_xref="GI:161503507"
+ /db_xref="InterPro:IPR005095"
+ /translation="MSAGNIFWGTPNPTTVKNNFGVRNFDSDTESQDGLYEQNPFAEG
+ YSVLLILLTVIQAIANAKFMDVQKNAERARNTQEKSNEMDEVIAEVSKGDPKTKAAVP
+ DDVANYMRKNGITIDGLTFDQYMAKYGDHGKLDKGGLQALKAALDNDANRNTDMMSQG
+ QLTIQKTAQMLNAVLSQLTGLISKWGEISTMIAQKTYS"
+ misc_feature complement(1532285..1532878)
+ /locus_tag="SARI_01583"
+ /note="pathogenicity island 2 effector protein SseB;
+ Provisional; Region: PRK15364"
+ /db_xref="CDD:185262"
+ gene complement(1532885..1533232)
+ /locus_tag="SARI_01584"
+ CDS complement(1532885..1533232)
+ /locus_tag="SARI_01584"
+ /inference="protein motif:superfamily:IPR009053"
+ /inference="similar to AA sequence:INSD:AAO68917.1"
+ /note="'COG: NOG23007 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570620.1"
+ /db_xref="GI:161503508"
+ /db_xref="InterPro:IPR009053"
+ /translation="MLKKKVVFSDEYRDLEQSYMQLNHYLKKFHQIRAKVSQQISERA
+ QCSKKNREPDTILDTLFPQGVAGVNREAERDLKKIVNMFKQLEARLQQLNTQSTVDNT
+ QSTVEVPSGKTKR"
+ misc_feature complement(1532888..1533232)
+ /locus_tag="SARI_01584"
+ /note="type III secretion system chaperone SseA;
+ Provisional; Region: PRK15365"
+ /db_xref="CDD:185263"
+ gene complement(1533274..1533537)
+ /locus_tag="SARI_01585"
+ CDS complement(1533274..1533537)
+ /locus_tag="SARI_01585"
+ /inference="protein motif:HMMTigr:IPR012671"
+ /inference="similar to AA sequence:INSD:AAL20320.1"
+ /note="'COG: NOG24541 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570621.1"
+ /db_xref="GI:161503509"
+ /db_xref="InterPro:IPR012671"
+ /translation="MKMTTLTQLEDLLLHSREEAKGIILQLRAARQQLEKACGKIQDP
+ QQYQQNTLLIEAIEQAENIINIIYYRYHNCALVVSEGPQKTLS"
+ misc_feature complement(1533292..1533531)
+ /locus_tag="SARI_01585"
+ /note="type III secretion system chaperone SsaE;
+ Provisional; Region: PRK15366"
+ /db_xref="CDD:185264"
+ gene complement(1533538..1534749)
+ /locus_tag="SARI_01586"
+ CDS complement(1533538..1534749)
+ /locus_tag="SARI_01586"
+ /inference="protein motif:HMMTigr:IPR012843"
+ /inference="similar to AA sequence:INSD:AAO68915.1"
+ /note="'COG: NOG08735 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570622.1"
+ /db_xref="GI:161503510"
+ /db_xref="InterPro:IPR012843"
+ /translation="MAYLMANLKSSWKIRFLGHLLQGREVWLNEGNLSLGEKGCDICI
+ PLTINGKIVLREQEESLFVDAGKARVKVNGRRFNQNKPLPSSGVLQVAGVALAFGKED
+ CDLASYQIPVSSLGYWWLAGIFLIFIGGIGVLLSIDGQPETVNDLPLRVKSLLDKSNI
+ HYVRTQWKKDGSLQLSGYCSSSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDILI
+ QMGYPHAEVSSEGPGSVLIHDNIQMDQKWRKVQPLLADVPGLLHWRISNSHQSQGNDI
+ ISAIIENGLVGLVNVTPMRCSFVISGVLDESHQRILQETLATLKKKYPALSIIYQDIA
+ PSHDAGRYLPAPVAGFVQSRHGDYLLLTDKERLRVGALLPDGGEIVHLSADVVTIKHS
+ DTLINYPLDFK"
+ misc_feature complement(1533544..1534728)
+ /locus_tag="SARI_01586"
+ /note="type III secretion system protein SsaD;
+ Provisional; Region: PRK15367"
+ /db_xref="CDD:185265"
+ misc_feature complement(1533550..1534716)
+ /locus_tag="SARI_01586"
+ /note="type III secretion apparatus protein, YscD/HrpQ
+ family; Region: type_III_yscD; TIGR02500"
+ /db_xref="CDD:233898"
+ gene complement(1534730..1536184)
+ /locus_tag="SARI_01587"
+ CDS complement(1534730..1536184)
+ /locus_tag="SARI_01587"
+ /inference="protein motif:HMMPfam:IPR004846"
+ /inference="protein motif:HMMPfam:IPR005644"
+ /inference="protein motif:HMMTigr:IPR003522"
+ /inference="protein motif:ScanRegExp:IPR004845"
+ /inference="similar to AA sequence:REFSEQ:NP_460359.1"
+ /note="'COG: COG1450 Type II secretory pathway, component
+ PulD;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570623.1"
+ /db_xref="GI:161503511"
+ /db_xref="InterPro:IPR003522"
+ /db_xref="InterPro:IPR004845"
+ /db_xref="InterPro:IPR004846"
+ /db_xref="InterPro:IPR005644"
+ /translation="MLNTAKSYELSWKGNDFTLYARQMPLTEVLHLLSENYDTAITIS
+ PSITATFSGKISPGPPVDILNNLAAQYDLLTWFDGNMLYVYPASLLKHQVINFNILST
+ GRFIHYLRSQNILSSPGCEVKEITGTSAVEVSGVPSCLTRISQLASVLDNALIKQKDS
+ AVSVSIYTLKYATAMDTQYQYRDQAVVVPGVVSVLREMSKSSVPASSTNNGSPATQEL
+ PMFAADPRQNAVIVRDYSVNMAGYRKLITELDQHQQMIEISVKIIDVNAGDINQLGID
+ WGTAVSLGGKKIAFNSGPNEGDTNGFSTVISDTSNFMVRLNALEKSSQAYVLSQPSVV
+ TLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSLLRVTPRLLNDNGTQKIMLNLNIQ
+ DGQQSDTQSETNPLPEVQNSEIASQATLLAGQSLLLGGFKQGKQIRSQNKIPLLGDIP
+ VLGHLFRNDTTQVHSVIRLFLIKASVVNNGISHG"
+ misc_feature complement(1534739..1536172)
+ /locus_tag="SARI_01587"
+ /note="outer membrane secretin SsaC; Provisional; Region:
+ PRK15346"
+ /db_xref="CDD:237950"
+ misc_feature complement(1535432..1535695)
+ /locus_tag="SARI_01587"
+ /note="Bacterial type II/III secretion system short
+ domain; Region: Secretin_N; pfam03958"
+ /db_xref="CDD:217815"
+ misc_feature complement(1534751..1535233)
+ /locus_tag="SARI_01587"
+ /note="Bacterial type II and III secretion system protein;
+ Region: Secretin; pfam00263"
+ /db_xref="CDD:215826"
+ gene complement(1536225..1536626)
+ /locus_tag="SARI_01588"
+ CDS complement(1536225..1536626)
+ /locus_tag="SARI_01588"
+ /inference="similar to AA sequence:REFSEQ:YP_150711.1"
+ /note="'COG: NOG20795 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570624.1"
+ /db_xref="GI:161503512"
+ /translation="MYEEGFMLAVLKGIPLIQDIKAEGNSRFWIMTIDGHPARGEIFS
+ DAFSISLFLNNLESLPTPCLVYVTLLLAAHPDIHDYAIQLTADAGWLNGYYTTSNSAE
+ LIAIEIEKHLSLTCILKNVIRNRHKLYSGGL"
+ misc_feature complement(1536228..1536608)
+ /locus_tag="SARI_01588"
+ /note="pathogenicity island chaperone protein SpiC;
+ Provisional; Region: PRK15368"
+ /db_xref="CDD:185266"
+ gene 1536979..1539789
+ /locus_tag="SARI_01589"
+ CDS 1536979..1539789
+ /locus_tag="SARI_01589"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:Gene3D:IPR003594"
+ /inference="protein motif:HMMPfam:IPR001789"
+ /inference="protein motif:HMMPfam:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003660"
+ /inference="protein motif:HMMPfam:IPR003661"
+ /inference="protein motif:HMMSmart:IPR001789"
+ /inference="protein motif:HMMSmart:IPR003594"
+ /inference="protein motif:HMMSmart:IPR003660"
+ /inference="protein motif:HMMSmart:IPR003661"
+ /inference="protein motif:superfamily:IPR003594"
+ /inference="protein motif:superfamily:IPR008207"
+ /inference="protein motif:superfamily:IPR009082"
+ /inference="protein motif:superfamily:IPR011006"
+ /note="'KEGG: sec:SC1413 0. ssrA; secretion system
+ regulator:sensor component K00873;
+ COG: COG0784 FOG: CheY-like receiver;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570625.1"
+ /db_xref="GI:161503513"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR003594"
+ /db_xref="InterPro:IPR003660"
+ /db_xref="InterPro:IPR003661"
+ /db_xref="InterPro:IPR008207"
+ /db_xref="InterPro:IPR009082"
+ /db_xref="InterPro:IPR011006"
+ /translation="MIKHQIFCNWKLKEGIMNLLNLKNTLQTSLVTRLTFLFLLTTII
+ IWLLSVFAAAYISMAQNRKHIMEDLSTISEMNIVLNNQRFEEAERDAQKLMYQCSFAT
+ VIRHNNTFPGVSRHLPVGPPNCTPTLNRDKPRIFPQPYDIDEENNHRDHFILNHKNEI
+ SLLPANAPSGYSTLQLMTLRRLPLYPNHAGFYWSKPEYINGKGWNVSVAVTDQHGVFF
+ GVTVDLHNLITNNHPQLDDSIHVWLDQNNHLLPFSYASQKIRTRLENVTLHDGWQQIP
+ GFLILRTTLHGPGWSQVILYPYGNLSSRILKTIIQQIPFTLTALVLMTSTFCWLLHSL
+ LAKPLWHFVDAINKTATEPLSTRLPEERQDELGSIAYAFNQLLNTLQVQYDNLESKVA
+ ERTHALNEAKKRAEQANKRKSIHLTVISHELRTPMNGVLGAIELLQTTPLNIKQQGLA
+ DTARYCTLSLLTLINNLLDFSRIESGHFTLHMEETALLPLLDQTMQTIQGPAQSKKLS
+ LRTFVGQHVPLYFHTDAIRLRQILVNLLGNAVKFTETGGIRLTVKRHAEQLIFLVSDS
+ GKGIEIQQQPKIFTAFYQADTNSQGTGIGLTIASSLAKMMGGELKIDSIPGVGTCISL
+ VLPLQEYQPPQPINGTLSAPICLHRQLACWGIRGELSHQQNALFNAELLYFPGKLYNL
+ AQQLILCTPNTPDINKLVQPWQLQILLVDDADINRDIIGRMLVSLGQNVTIAASSNEA
+ LTLSQQQRFDLVLMDIRMPEIDGIECVQLWHDNPANLDPDCMIVALSASVASEDINRC
+ KKHGIHHYITKPVTLATLARYISIAAEYQLLRNIELQEQDPSRCSALLATDDIDINSK
+ IFQSLDLLLSDIESAVSTGKKVDQLLHTLKGCLGQAGQTELACYVADIEYRVNMGKII
+ TMEELTNLRQKVRIIFNNYTIT"
+ misc_feature 1537129..1539786
+ /locus_tag="SARI_01589"
+ /note="two component system sensor kinase SsrA;
+ Provisional; Region: PRK15347"
+ /db_xref="CDD:237951"
+ misc_feature 1537981..1538121
+ /locus_tag="SARI_01589"
+ /note="Histidine kinase, Adenylyl cyclase,
+ Methyl-accepting protein, and Phosphatase (HAMP) domain.
+ HAMP is a signaling domain which occurs in a wide variety
+ of signaling proteins, many of which are bacterial. The
+ HAMP domain consists of two alpha helices...; Region:
+ HAMP; cd06225"
+ /db_xref="CDD:100122"
+ misc_feature order(1537981..1537986,1537993..1537998,1538002..1538007,
+ 1538014..1538019,1538023..1538025,1538071..1538076,
+ 1538080..1538085,1538092..1538097,1538101..1538106,
+ 1538113..1538118)
+ /locus_tag="SARI_01589"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:100122"
+ misc_feature 1538224..1538394
+ /locus_tag="SARI_01589"
+ /note="Histidine Kinase A (dimerization/phosphoacceptor)
+ domain; Histidine Kinase A dimers are formed through
+ parallel association of 2 domains creating 4-helix
+ bundles; usually these domains contain a conserved His
+ residue and are activated via...; Region: HisKA; cd00082"
+ /db_xref="CDD:119399"
+ misc_feature order(1538233..1538235,1538245..1538247,1538254..1538256,
+ 1538266..1538268,1538275..1538277,1538323..1538325,
+ 1538335..1538337,1538344..1538346,1538356..1538358,
+ 1538365..1538367,1538377..1538379)
+ /locus_tag="SARI_01589"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119399"
+ misc_feature 1538239..1538241
+ /locus_tag="SARI_01589"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:119399"
+ misc_feature 1538560..1538856
+ /locus_tag="SARI_01589"
+ /note="Histidine kinase-like ATPases; This family includes
+ several ATP-binding proteins for example: histidine
+ kinase, DNA gyrase B, topoisomerases, heat shock protein
+ HSP90, phytochrome-like ATPases and DNA mismatch repair
+ proteins; Region: HATPase_c; cd00075"
+ /db_xref="CDD:238030"
+ misc_feature order(1538578..1538580,1538590..1538592,1538599..1538601,
+ 1538665..1538667,1538671..1538673,1538677..1538679,
+ 1538683..1538688,1538755..1538766,1538812..1538814,
+ 1538818..1538820,1538833..1538838,1538842..1538844)
+ /locus_tag="SARI_01589"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature 1538590..1538592
+ /locus_tag="SARI_01589"
+ /note="Mg2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature order(1538677..1538679,1538683..1538685,1538755..1538757,
+ 1538761..1538763)
+ /locus_tag="SARI_01589"
+ /note="G-X-G motif; other site"
+ /db_xref="CDD:238030"
+ misc_feature 1539100..1539438
+ /locus_tag="SARI_01589"
+ /note="Signal receiver domain; originally thought to be
+ unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
+ recently identified in eukaroytes ETR1 Arabidopsis
+ thaliana; this domain receives the signal from the sensor
+ partner in a two-component systems; Region: REC; cd00156"
+ /db_xref="CDD:238088"
+ misc_feature order(1539109..1539114,1539241..1539243,1539265..1539267,
+ 1539337..1539339,1539394..1539396,1539403..1539408)
+ /locus_tag="SARI_01589"
+ /note="active site"
+ /db_xref="CDD:238088"
+ misc_feature 1539241..1539243
+ /locus_tag="SARI_01589"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238088"
+ misc_feature order(1539250..1539255,1539259..1539267)
+ /locus_tag="SARI_01589"
+ /note="intermolecular recognition site; other site"
+ /db_xref="CDD:238088"
+ misc_feature 1539403..1539411
+ /locus_tag="SARI_01589"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238088"
+ gene 1539820..1540458
+ /locus_tag="SARI_01590"
+ CDS 1539820..1540458
+ /locus_tag="SARI_01590"
+ /inference="protein motif:BlastProDom:IPR000792"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000792"
+ /inference="protein motif:HMMPfam:IPR001789"
+ /inference="protein motif:HMMSmart:IPR000792"
+ /inference="protein motif:HMMSmart:IPR001789"
+ /inference="protein motif:ScanRegExp:IPR000792"
+ /inference="protein motif:superfamily:IPR011006"
+ /inference="similar to AA sequence:INSD:CAD01974.1"
+ /note="'KEGG: pha:PSHAa1916 8.1e-27 uvrY, sirA; response
+ regulator K07689;
+ COG: COG2197 Response regulator containing a CheY-like
+ receiver domain and an HTH DNA-binding domain;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570626.1"
+ /db_xref="GI:161503514"
+ /db_xref="InterPro:IPR000792"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR011006"
+ /db_xref="InterPro:IPR011991"
+ /translation="MKEYKILLVDDHEIIVNGIMNALLPWPHFKIVEHVKNGLEVYNA
+ CCAHEPDILILDLILPGINGLDIIPQLHQRWPAMNILVYTAYQQEHMTIKTLAAGANG
+ YVLKSSSQQVLLAALQTVAVNKRYIDPTLNREAIMAELNADAPNHQLLTLRERQVLKL
+ IDEGYTNHGISEKLHISIKTVETHRMNMMRKLQVHKVTELLNCARRMRLIEY"
+ misc_feature 1539820..1540452
+ /locus_tag="SARI_01590"
+ /note="two component system sensor kinase SsrB;
+ Provisional; Region: PRK15369"
+ /db_xref="CDD:185267"
+ misc_feature 1539838..1540182
+ /locus_tag="SARI_01590"
+ /note="Signal receiver domain; originally thought to be
+ unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
+ recently identified in eukaroytes ETR1 Arabidopsis
+ thaliana; this domain receives the signal from the sensor
+ partner in a two-component systems; Region: REC; cd00156"
+ /db_xref="CDD:238088"
+ misc_feature order(1539847..1539852,1539985..1539987,1540009..1540011,
+ 1540069..1540071,1540126..1540128,1540135..1540140)
+ /locus_tag="SARI_01590"
+ /note="active site"
+ /db_xref="CDD:238088"
+ misc_feature 1539985..1539987
+ /locus_tag="SARI_01590"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238088"
+ misc_feature order(1539994..1539999,1540003..1540011)
+ /locus_tag="SARI_01590"
+ /note="intermolecular recognition site; other site"
+ /db_xref="CDD:238088"
+ misc_feature 1540135..1540143
+ /locus_tag="SARI_01590"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238088"
+ misc_feature 1540267..1540437
+ /locus_tag="SARI_01590"
+ /note="C-terminal DNA-binding domain of LuxR-like
+ proteins. This domain contains a helix-turn-helix motif
+ and binds DNA. Proteins belonging to this group are
+ response regulators; some act as transcriptional
+ activators, others as transcriptional repressors. Many...;
+ Region: LuxR_C_like; cd06170"
+ /db_xref="CDD:99777"
+ misc_feature order(1540270..1540278,1540315..1540323,1540345..1540350,
+ 1540354..1540359,1540363..1540377,1540408..1540410)
+ /locus_tag="SARI_01590"
+ /note="DNA binding residues [nucleotide binding]"
+ /db_xref="CDD:99777"
+ misc_feature order(1540303..1540305,1540309..1540311,1540315..1540317,
+ 1540408..1540416,1540423..1540425,1540432..1540437)
+ /locus_tag="SARI_01590"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99777"
+ gene 1540627..1541355
+ /locus_tag="SARI_01591"
+ CDS 1540627..1541355
+ /locus_tag="SARI_01591"
+ /inference="protein motif:HMMPfam:IPR000551"
+ /inference="protein motif:HMMSmart:IPR000551"
+ /inference="protein motif:ScanRegExp:IPR000551"
+ /inference="protein motif:superfamily:IPR009061"
+ /inference="similar to AA sequence:INSD:CAB37409.1"
+ /note="'KEGG: eci:UTI89_C3737 3.0e-06 yhdM;
+ Zn(II)-responsive regulator of ZntA;
+ COG: COG0789 Predicted transcriptional regulators;
+ Psort location: vesicles of secretory system, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570627.1"
+ /db_xref="GI:161503515"
+ /db_xref="InterPro:IPR000551"
+ /db_xref="InterPro:IPR009061"
+ /translation="MAYSIGEFARLCGINATTLRAWQRRYGLLKPQRTDGGHRLYSDE
+ DVQQALSILEWMRKGVPISQVKPLLSRPVIRLGDNWITIQETMLQHLHEGRIDALRQL
+ IYDCGREYPRAELVTHLLRPLRSKVSAHLPAVMTLREVLDGIIISYTTFCLEGDRKAP
+ GYSAFISGWNLSDHCEIWLEALTRTGQGLRIDILPSPPTVLAPELFSQRKWFLVTTGK
+ LTAGQKKQLAQWHNVIASLELITL"
+ misc_feature 1540633..1541316
+ /locus_tag="SARI_01591"
+ /note="transcriptional regulator MirA; Provisional;
+ Region: PRK15043"
+ /db_xref="CDD:185003"
+ misc_feature 1540633..1540836
+ /locus_tag="SARI_01591"
+ /note="Helix-Turn-Helix DNA binding domain of the
+ transcription regulators MlrA and CarA; Region:
+ HTH_MlrA-CarA; cd01104"
+ /db_xref="CDD:133379"
+ misc_feature order(1540636..1540644,1540684..1540686,1540735..1540743)
+ /locus_tag="SARI_01591"
+ /note="DNA binding residues [nucleotide binding]"
+ /db_xref="CDD:133379"
+ gene 1541528..1542487
+ /locus_tag="SARI_01592"
+ CDS 1541528..1542487
+ /locus_tag="SARI_01592"
+ /inference="protein motif:HMMPfam:IPR007553"
+ /inference="protein motif:HMMPfam:IPR013560"
+ /inference="similar to AA sequence:INSD:AAO68909.1"
+ /note="'KEGG: ctc:CTC02272 0.0015 purine nucleoside
+ phosphorylase K00755;
+ COG: COG3272 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570628.1"
+ /db_xref="GI:161503516"
+ /db_xref="InterPro:IPR007553"
+ /db_xref="InterPro:IPR013560"
+ /translation="MKNKPVIGISECLTGAAVRFDGGHKRMDFVMNSLAPWVTYKTIC
+ PEVAIGLPVPRPALRLIQTTSGDIRMRYSHAPYDDITDKMNAFADRFLPTMGELAGFI
+ VCAKSPSCGMERVRLYDEKGNRGRKAGTGLFTAAMMAKYPWLPVEEDGRLHDPVLREN
+ FIERVFALNELNALRAQGLNRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDD
+ LEAFFVHYREKLMAILRHPASRKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAG
+ RLPILAPLTLLKHYLAEHPDDYLRTQNYFEPYPDTLGLRLTIT"
+ misc_feature 1541534..1541995
+ /locus_tag="SARI_01592"
+ /note="Uncharacterized conserved protein [Function
+ unknown]; Region: COG1683"
+ /db_xref="CDD:224597"
+ misc_feature 1541996..1542484
+ /locus_tag="SARI_01592"
+ /note="Uncharacterized conserved protein [Function
+ unknown]; Region: COG3272"
+ /db_xref="CDD:225811"
+ misc_feature 1542101..1542454
+ /locus_tag="SARI_01592"
+ /note="Protein of unknown function (DUF1722); Region:
+ DUF1722; pfam08349"
+ /db_xref="CDD:149418"
+ gene complement(1542511..1542645)
+ /locus_tag="SARI_01593"
+ CDS complement(1542511..1542645)
+ /locus_tag="SARI_01593"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570629.1"
+ /db_xref="GI:161503517"
+ /translation="MRDEAVGLENALRFQGGFLFAFITTGAKPYLNGTAYRQLVWRYQ
+ "
+ gene complement(1542714..1543028)
+ /locus_tag="SARI_01594"
+ CDS complement(1542714..1543028)
+ /locus_tag="SARI_01594"
+ /inference="similar to AA sequence:REFSEQ:YP_216396.1"
+ /note="'COG: NOG13889 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570630.1"
+ /db_xref="GI:161503518"
+ /translation="MNNKLRYCFDLDQILFKGGDCYILLVCAGGREKRMGKPTKDDEL
+ YREMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTALANQRIQRSALEKKAMETVINALV
+ GS"
+ misc_feature complement(1542720..1542926)
+ /locus_tag="SARI_01594"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10292"
+ /db_xref="CDD:182359"
+ gene complement(1543025..1543645)
+ /locus_tag="SARI_01595"
+ CDS complement(1543025..1543645)
+ /locus_tag="SARI_01595"
+ /inference="protein motif:BlastProDom:IPR000792"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000792"
+ /inference="protein motif:HMMPfam:IPR001789"
+ /inference="protein motif:HMMSmart:IPR000792"
+ /inference="protein motif:HMMSmart:IPR001789"
+ /inference="protein motif:ScanRegExp:IPR000792"
+ /inference="protein motif:superfamily:IPR011006"
+ /inference="similar to AA sequence:INSD:CAB37412.1"
+ /note="'KEGG: rru:Rru_A1500 6.4e-19 signal transduction
+ histidine kinase (STHK) with CheB and CheR activity
+ K03412:K00575;
+ COG: COG4566 Response regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570631.1"
+ /db_xref="GI:161503519"
+ /db_xref="InterPro:IPR000792"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR011006"
+ /db_xref="InterPro:IPR011991"
+ /translation="MAIIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQAGLY
+ QTGVILLDMRMPVLDGQDVHDALRQCGGTLAVIFLTGHGDVPMAVEQMKRGAVDFLQK
+ PVAVKPLQAALERALRVSSLAVARREIMLCYQQLTPKERELASLVAKGFMNREIAEAM
+ NIALRTVEVHRARVMEKMQAGSLAELIRRFEKLTAPETKISTNYDS"
+ misc_feature complement(1543067..1543645)
+ /locus_tag="SARI_01595"
+ /note="Response regulator [Signal transduction
+ mechanisms]; Region: TtrR; COG4566"
+ /db_xref="CDD:226932"
+ misc_feature complement(1543295..1543630)
+ /locus_tag="SARI_01595"
+ /note="Signal receiver domain; originally thought to be
+ unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
+ recently identified in eukaroytes ETR1 Arabidopsis
+ thaliana; this domain receives the signal from the sensor
+ partner in a two-component systems; Region: REC; cd00156"
+ /db_xref="CDD:238088"
+ misc_feature complement(order(1543337..1543342,1543349..1543351,
+ 1543406..1543408,1543466..1543468,1543490..1543492,
+ 1543619..1543624))
+ /locus_tag="SARI_01595"
+ /note="active site"
+ /db_xref="CDD:238088"
+ misc_feature complement(1543490..1543492)
+ /locus_tag="SARI_01595"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238088"
+ misc_feature complement(order(1543466..1543474,1543478..1543483))
+ /locus_tag="SARI_01595"
+ /note="intermolecular recognition site; other site"
+ /db_xref="CDD:238088"
+ misc_feature complement(1543334..1543342)
+ /locus_tag="SARI_01595"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238088"
+ misc_feature complement(1543079..1543240)
+ /locus_tag="SARI_01595"
+ /note="C-terminal DNA-binding domain of LuxR-like
+ proteins. This domain contains a helix-turn-helix motif
+ and binds DNA. Proteins belonging to this group are
+ response regulators; some act as transcriptional
+ activators, others as transcriptional repressors. Many...;
+ Region: LuxR_C_like; cd06170"
+ /db_xref="CDD:99777"
+ misc_feature complement(order(1543097..1543099,1543130..1543144,
+ 1543148..1543153,1543157..1543162,1543184..1543192,
+ 1543229..1543237))
+ /locus_tag="SARI_01595"
+ /note="DNA binding residues [nucleotide binding]"
+ /db_xref="CDD:99777"
+ misc_feature complement(order(1543082..1543084,1543091..1543099,
+ 1543190..1543192,1543196..1543198,1543202..1543204))
+ /locus_tag="SARI_01595"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99777"
+ gene complement(1543620..1545299)
+ /locus_tag="SARI_01596"
+ CDS complement(1543620..1545299)
+ /locus_tag="SARI_01596"
+ /inference="protein motif:Gene3D:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003661"
+ /inference="protein motif:HMMSmart:IPR003594"
+ /inference="protein motif:HMMSmart:IPR003661"
+ /inference="protein motif:superfamily:IPR003594"
+ /inference="protein motif:superfamily:IPR009082"
+ /inference="similar to AA sequence:INSD:AAL20310.1"
+ /note="'KEGG: stm:STM1386 7.2e-280 ttrS; sensory histidine
+ kinase K00873;
+ COG: COG0642 Signal transduction histidine kinase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570632.1"
+ /db_xref="GI:161503520"
+ /db_xref="InterPro:IPR003594"
+ /db_xref="InterPro:IPR003661"
+ /db_xref="InterPro:IPR009082"
+ /translation="MRGEASTRRHWQPLEMTLNQQIPGETFHIQPLDLHQIQEAVNRR
+ TVQFVITNPAQFVRLNSHAPLRWLASLRSTRDGKAVGNVIGSVILTRRDSGITTAHDL
+ IGKTVGAIDAQAFGGYLLGYKALSDAGLRPERDFHFRFTGFPGDALVYMLREKAVQAA
+ IVPVCLLENMDQEGLIDEKDFIALLSRPTTLPCLTSTQLYPDWSFAALPAVSDALADR
+ VTRALFNAPAAAPFHWGAPASTSQVEALLRDVRQHPQQRRLWLDVKSWLIQHQLMVGG
+ LTLAFLLLTLNYIWVMLLVRRRGKQLERNSVVLHQHERALEAARQMSVLGEMTSGFAH
+ ELNQPLSAIRHYAQGCLIRLRVEDERHPLLSALDHIDQQAQRGADTLRNLRHWVSQAQ
+ GNPVLTEEWKAIAIREAIDHVWQLLRMAHQFPSVDLHTEVSAALRVTLPPVLLEQVLA
+ NVILNAAQAGATHLWIIAERIENGVSIVLQDNAGGIDNALLRQAFQPFMTTRKEGMGL
+ GLAICQRLVRYGRGDISIRNQTAPDGQAGTVVTIHFLHENGGKDGDNTSIG"
+ misc_feature complement(1544610..1545299)
+ /locus_tag="SARI_01596"
+ /note="ABC transporter, phosphonate, periplasmic
+ substrate-binding protein; Region: Phosphonate-bd;
+ pfam12974"
+ /db_xref="CDD:221878"
+ misc_feature complement(<1544859..>1545110)
+ /locus_tag="SARI_01596"
+ /note="TRAP transporter solute receptor, TAXI family;
+ Region: TRAP_TAXI; TIGR02122"
+ /db_xref="CDD:233736"
+ misc_feature complement(1543668..>1544423)
+ /locus_tag="SARI_01596"
+ /note="Signal transduction histidine kinase [Signal
+ transduction mechanisms]; Region: BaeS; COG0642"
+ /db_xref="CDD:223715"
+ misc_feature complement(1544148..1544336)
+ /locus_tag="SARI_01596"
+ /note="Histidine Kinase A (dimerization/phosphoacceptor)
+ domain; Histidine Kinase A dimers are formed through
+ parallel association of 2 domains creating 4-helix
+ bundles; usually these domains contain a conserved His
+ residue and are activated via...; Region: HisKA; cd00082"
+ /db_xref="CDD:119399"
+ misc_feature complement(order(1544148..1544150,1544160..1544162,
+ 1544169..1544171,1544181..1544183,1544190..1544192,
+ 1544211..1544213,1544262..1544264,1544271..1544273,
+ 1544283..1544285,1544292..1544294,1544304..1544306,
+ 1544316..1544318))
+ /locus_tag="SARI_01596"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119399"
+ misc_feature complement(1544298..1544300)
+ /locus_tag="SARI_01596"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:119399"
+ misc_feature complement(1543668..1543967)
+ /locus_tag="SARI_01596"
+ /note="Histidine kinase-like ATPases; This family includes
+ several ATP-binding proteins for example: histidine
+ kinase, DNA gyrase B, topoisomerases, heat shock protein
+ HSP90, phytochrome-like ATPases and DNA mismatch repair
+ proteins; Region: HATPase_c; cd00075"
+ /db_xref="CDD:238030"
+ misc_feature complement(order(1543680..1543682,1543686..1543691,
+ 1543716..1543718,1543722..1543724,1543770..1543781,
+ 1543842..1543847,1543851..1543853,1543857..1543859,
+ 1543863..1543865,1543935..1543937,1543947..1543949))
+ /locus_tag="SARI_01596"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature complement(1543935..1543937)
+ /locus_tag="SARI_01596"
+ /note="Mg2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature complement(order(1543773..1543775,1543779..1543781,
+ 1543845..1543847,1543851..1543853))
+ /locus_tag="SARI_01596"
+ /note="G-X-G motif; other site"
+ /db_xref="CDD:238030"
+ gene 1545562..1546314
+ /locus_tag="SARI_01597"
+ CDS 1545562..1546314
+ /locus_tag="SARI_01597"
+ /inference="protein motif:HMMPfam:IPR001450"
+ /inference="protein motif:ScanRegExp:IPR001450"
+ /inference="similar to AA sequence:INSD:AAG31757.1"
+ /note="'KEGG: pai:PAE1263 1.4e-45 molybdopterin
+ oxidoreductase, iron-sulfur binding subunit K00184;
+ COG: COG0437 Fe-S-cluster-containing hydrogenase
+ components 1;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570633.1"
+ /db_xref="GI:161503521"
+ /db_xref="InterPro:IPR001450"
+ /translation="MWTGVNMDSSKRQLLQQLGILTVGASLVPLAEAKFPFSPERHEG
+ SSRHRYAMLIDLRRCIGCQSCTVSCTIENQTPQGAFRTTVNQYQVQPEGSREVTNVLL
+ PRLCNHCDNPPCVPVCPVQATFQREDGIVVVDNKRCVGCAYCVQACPYDARFINHETQ
+ TADKCTFCVHRLEAGLLPACVESCVGGARIIGDIKDPHSRIATMLHQHRDAIKVLKPE
+ NGTSPHVFYLGLDDAFVTPLMGRAQPALWQEV"
+ misc_feature 1545580..1546311
+ /locus_tag="SARI_01597"
+ /note="tetrathionate reductase subunit B; Provisional;
+ Region: PRK14993"
+ /db_xref="CDD:184955"
+ misc_feature 1545952..1546017
+ /locus_tag="SARI_01597"
+ /note="4Fe-4S binding domain; Region: Fer4; pfam00037"
+ /db_xref="CDD:215671"
+ gene 1546315..1547337
+ /locus_tag="SARI_01598"
+ CDS 1546315..1547337
+ /locus_tag="SARI_01598"
+ /inference="protein motif:HMMPfam:IPR005614"
+ /inference="similar to AA sequence:INSD:AAS90313.1"
+ /note="'KEGG: pai:PAE2861 3.5e-06 molybdopterin
+ oxidoreductase, membrane subunit K00185;
+ COG: NOG06755 non supervised orthologous group;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570634.1"
+ /db_xref="GI:161503522"
+ /db_xref="InterPro:IPR005614"
+ /translation="MTHLLIIEEVLAHPQDISWLPWAVQYFFFIGIAACAALFACYLH
+ WRKKDAATEENQALLIAVTCAITAPLALTADLHQTARVWHFYAWPTPWSWMPWGALFL
+ PMFTGFLVLWFLAQQMKRMLNKSYNVTKWLALASALCALGLLIYTGREVSVVMARPIW
+ FSYAFPVAMFLSALQACFALMIVAARRDSARLPKILWGQIWTLAALGLVVAMWVSGDT
+ LSGTAIRRWITVALSAKYYAAGWIALWVLTLLFCSLTLRHPLSQLRRVLLVLSALALC
+ WLMRWTLLIQVQTVPKFNAQFNPYSLPGGTDGWLAILGTFGLWIALLIIIRETLNGLT
+ RRLQHG"
+ misc_feature 1546330..1547334
+ /locus_tag="SARI_01598"
+ /note="tetrathionate reductase subunit C; Provisional;
+ Region: PRK14992"
+ /db_xref="CDD:184954"
+ misc_feature 1546339..1547091
+ /locus_tag="SARI_01598"
+ /note="Polysulphide reductase, NrfD; Region: NrfD;
+ pfam03916"
+ /db_xref="CDD:217790"
+ gene 1547330..1550392
+ /locus_tag="SARI_01599"
+ CDS 1547330..1550392
+ /locus_tag="SARI_01599"
+ /inference="protein motif:HMMPfam:IPR006656"
+ /inference="protein motif:HMMPfam:IPR006657"
+ /inference="protein motif:HMMPfam:IPR006963"
+ /inference="protein motif:superfamily:IPR009010"
+ /note="'KEGG: afu:AF0159 6.0e-95 molybdopterin
+ oxidoreductase, molybdopterin binding subunit K00183;
+ COG: COG0243 Anaerobic dehydrogenases, typically
+ selenocysteine-containing;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570635.1"
+ /db_xref="GI:161503523"
+ /db_xref="InterPro:IPR006656"
+ /db_xref="InterPro:IPR006657"
+ /db_xref="InterPro:IPR006963"
+ /db_xref="InterPro:IPR009010"
+ /translation="MANLTRRQWLKVGLAVGGMVTFGLSYRDVAKRAIDGLLNGTSGK
+ VTRDRIFGNALIPEAQAQTHWQQNPQQTIAMTQCFGCWTQCGIRARVNADGKVIRIAG
+ NPYHPLSQEHPIDPSVPFSKAMEQLAGESGLDARSTACARGATLLESLYSPLRLLEPM
+ KRVGKRGEGKWQRISFEQLIEEVVEGGDLFGEGHVDGLRAIHAPDTPIDAKHPSFGPK
+ TNQLLVTNTSDEGRDAFLRRFALNSFGSKNFGAHGAYCGLAYRAGSGALMGDLDKNPH
+ VKPDWENVEFALFMGTSPAQSGNPFKRQARQLASARLRENFQYVVVAPALPLSTVLAD
+ PRGRWQPVLPGSDSALAMGMIRWIMDNQRYHADYLAIPGVQAMQQAGEQSWTNATHLV
+ IADELPTLAGQHLTLRHLTPGGEETPVVLNTDGELVAASTCRQARLFVTQVVTLADGQ
+ RVTVKSGLQRLKEAAEKLSLTQYSEQCGVPEAQIIALAETFTAHGRKAAVISHGGMMA
+ GNGFYNAWSVMMLNTLIGNLSLSGGVFVGGGKFNGVSDGPRYNMNSFAGKMKPSGLSI
+ ARSKTAYETSEEYRDKIAAGQSPYPAKAPWYPFVAGQLTELLTSALEGYPYPLKAWIS
+ NMSNPFYGIPGLRAVAEEKLKDPRRLPLFIAIDAFMNETTALADYIVPDTHNFESWGF
+ TAPWGGVASKTTTARWPVVAPATSRTADGQPVSMEAFCIAVAKRLRLPGFGDRAITDP
+ QGNAFPLNRAEDFYLRVAANIAFMGKTPVAPANQEDITLTGVTRILPAIQHTLKPDEV
+ SRVAFIYSRGGRFAPEGSGYTDQRLGNAWEKPLQVWNADVAAHRHAITGERFSGCPVW
+ YPARLSDGRAIDDQFPVGQWPLKLISFKSNTMSSSTAVIPRLHHVKPANLVALNPQDG
+ ERYGLQHGDRVRIITPGGQVVTQISLLNGVMPGVIAIEHGYGHREMGATQHSLDGAPM
+ PYDPQIQSGINLNDLGFADPTRTVTNTWLDWVSGAAVRQGLPAKIERI"
+ misc_feature 1547333..1550389
+ /locus_tag="SARI_01599"
+ /note="tetrathionate reductase subunit A; Provisional;
+ Region: PRK14991"
+ /db_xref="CDD:237883"
+ misc_feature 1547552..1549921
+ /locus_tag="SARI_01599"
+ /note="The MopB_Tetrathionate-Ra CD contains tetrathionate
+ reductase, subunit A, (TtrA) and other related proteins.
+ The Salmonella enterica tetrathionate reductase catalyses
+ the reduction of trithionate but not sulfur or
+ thiosulfate. Members of this CD belong...; Region:
+ MopB_Tetrathionate-Ra; cd02758"
+ /db_xref="CDD:239159"
+ misc_feature order(1547561..1547563,1547570..1547572,1547582..1547584,
+ 1547747..1547749)
+ /locus_tag="SARI_01599"
+ /note="putative [Fe4-S4] binding site [ion binding]; other
+ site"
+ /db_xref="CDD:239159"
+ misc_feature order(1547753..1547755,1548008..1548010,1548086..1548088,
+ 1548092..1548100,1548197..1548202,1548206..1548208,
+ 1548215..1548220,1548293..1548304,1548362..1548364,
+ 1548368..1548370,1548833..1548844,1548848..1548850,
+ 1548947..1548952,1549205..1549213,1549223..1549225,
+ 1549295..1549303,1549310..1549312,1549346..1549351,
+ 1549364..1549366)
+ /locus_tag="SARI_01599"
+ /note="putative molybdopterin cofactor binding site
+ [chemical binding]; other site"
+ /db_xref="CDD:239159"
+ misc_feature 1549955..1550386
+ /locus_tag="SARI_01599"
+ /note="This CD contains the molybdopterin_binding
+ C-terminal (MopB_CT) region of tetrathionate reductase,
+ subunit A, (TtrA); respiratory arsenate As(V) reductase,
+ catalytic subunit (ArrA); and other related proteins;
+ Region: MopB_CT_Tetrathionate_Arsenate-R; cd02780"
+ /db_xref="CDD:239181"
+ misc_feature order(1549958..1549984,1550186..1550188,1550273..1550275,
+ 1550366..1550371)
+ /locus_tag="SARI_01599"
+ /note="putative molybdopterin cofactor binding site; other
+ site"
+ /db_xref="CDD:239181"
+ gene complement(1550548..1550772)
+ /locus_tag="SARI_01601"
+ CDS complement(1550548..1550772)
+ /locus_tag="SARI_01601"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570636.1"
+ /db_xref="GI:161503525"
+ /translation="MGKNTPLGFHPEIEPTQVHDKKSEKRAKVHQRGDGFNLAQITEQ
+ QGDSAGKLMPDRVKTRLLLRSRARYFLRAD"
+ gene 1550638..1550949
+ /locus_tag="SARI_01600"
+ CDS 1550638..1550949
+ /locus_tag="SARI_01600"
+ /inference="protein motif:HMMPanther:IPR002293"
+ /inference="similar to AA sequence:INSD:AAX65306.1"
+ /note="'COG: COG0531 Amino acid transporters;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570637.1"
+ /db_xref="GI:161503524"
+ /db_xref="InterPro:IPR002293"
+ /translation="MLLSYLCKIESISPLVNFGALFAFFVVNLCGFNFRMKSQRRIFA
+ HVILPIMGIIAIGYVCLSMNIHALLVGISWAAIGIAILCYQKAHNQNIAIDLEGKKLL
+ N"
+ gene 1551351..1552763
+ /locus_tag="SARI_01602"
+ CDS 1551351..1552763
+ /locus_tag="SARI_01602"
+ /inference="protein motif:BlastProDom:IPR001697"
+ /inference="protein motif:FPrintScan:IPR001697"
+ /inference="protein motif:HMMPanther:IPR001697"
+ /inference="protein motif:HMMPfam:IPR001697"
+ /inference="protein motif:HMMTigr:IPR001697"
+ /inference="protein motif:ScanRegExp:IPR001697"
+ /inference="protein motif:superfamily:IPR001697"
+ /inference="protein motif:superfamily:IPR011037"
+ /inference="similar to AA sequence:INSD:AAO68900.1"
+ /note="catalyzes the formation of phosphoenolpyruvate from
+ pyruvate"
+ /codon_start=1
+ /transl_table=11
+ /product="pyruvate kinase"
+ /protein_id="YP_001570638.1"
+ /db_xref="GI:161503526"
+ /db_xref="InterPro:IPR001697"
+ /db_xref="InterPro:IPR011037"
+ /translation="MKKTKIVCTIGPKTESEEMLTKMLDAGMNVMRLNFSHGDYAEHG
+ QRIQNLRNVMSKTGKKAAILLDTKGPEIRTIKLEGGNDVSLKAGQTFTFTTDKSVVGN
+ NEIVAVTYEGFTSDLSVGNTVLVDDGLIGMEVTAIEGNKVVCKVLNNGDLGENKGVNL
+ PGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVVEIREHLKAHGGENIQII
+ SKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVIT
+ ATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICER
+ TDRVMNSRLDYHNDSRKLRITEAVCRGAVETAEKLEAPLIVVATQGGKSARAVRKYFP
+ DATILALTTNEVTARQLVLSKGVVSQLVKEINSTDDFYRLGKDVALQSGLAQKGDVVV
+ MVSGALVPSGTTNTASVHVL"
+ misc_feature 1551351..1552760
+ /locus_tag="SARI_01602"
+ /note="pyruvate kinase; Provisional; Region: PRK09206"
+ /db_xref="CDD:181699"
+ misc_feature 1551351..1552760
+ /locus_tag="SARI_01602"
+ /note="Pyruvate kinase (PK): Large allosteric enzyme that
+ regulates glycolysis through binding of the substrate,
+ phosphoenolpyruvate, and one or more allosteric effectors.
+ Like other allosteric enzymes, PK has a high substrate
+ affinity R state and a low...; Region: Pyruvate_Kinase;
+ cd00288"
+ /db_xref="CDD:238178"
+ misc_feature order(1551357..1551362,1551528..1551530,1551534..1551536,
+ 1551558..1551569,1551822..1551827,1551843..1551845,
+ 1551852..1551866,1551909..1551911,1551933..1551935,
+ 1551954..1551956,1551990..1551992,1552098..1552100,
+ 1552152..1552157,1552167..1552169,1552263..1552265,
+ 1552269..1552271,1552356..1552358,1552362..1552367,
+ 1552515..1552517,1552521..1552523,1552527..1552529,
+ 1552560..1552562,1552569..1552574,1552578..1552580,
+ 1552584..1552592)
+ /locus_tag="SARI_01602"
+ /note="domain interfaces; other site"
+ /db_xref="CDD:238178"
+ misc_feature order(1551444..1551446,1551450..1551452,1551546..1551548,
+ 1551927..1551929,1552008..1552010,1552014..1552016,
+ 1552086..1552088,1552182..1552184)
+ /locus_tag="SARI_01602"
+ /note="active site"
+ /db_xref="CDD:238178"
+ gene 1553073..1553309
+ /locus_tag="SARI_01603"
+ CDS 1553073..1553309
+ /locus_tag="SARI_01603"
+ /inference="similar to AA sequence:INSD:AAR02620.1"
+ /note="'COG: COG4238 Murein lipoprotein;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570639.1"
+ /db_xref="GI:161503527"
+ /translation="MNRTKLVLGAVILGSTLLAGCSSNAKIDQLSSDVQTLNAKVDQL
+ SNDVNAMRSDVQAAKDDAARANQRLDNQATKYRK"
+ misc_feature 1553073..1553306
+ /locus_tag="SARI_01603"
+ /note="murein lipoprotein; Provisional; Region: PRK15396"
+ /db_xref="CDD:185294"
+ gene complement(1553378..1554379)
+ /locus_tag="SARI_01604"
+ CDS complement(1553378..1554379)
+ /locus_tag="SARI_01604"
+ /inference="protein motif:HMMPfam:IPR002482"
+ /inference="protein motif:HMMPfam:IPR005490"
+ /inference="protein motif:HMMSmart:IPR002482"
+ /inference="similar to AA sequence:INSD:AAL20299.1"
+ /note="'KEGG: eci:UTI89_C2228 2.9e-63 erfK; hypothetical
+ protein K00257;
+ COG: COG1376 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570640.1"
+ /db_xref="GI:161503528"
+ /db_xref="InterPro:IPR002482"
+ /db_xref="InterPro:IPR005490"
+ /translation="MKRASFITLTFIGAYSALQAAWAVDYPLPPEGSRLIGQNQTYTV
+ QEGDKNLQAIARRFDTAAMLILEANNTIAPVPKPGTLITIPSQMLLPDAPREGVVVNL
+ AELRLYYYPAGENRVQVYPIGIGLQGLETPVMDTRIGQKIPNPTWTPTAGIRQRSLER
+ GITLPPVIPAGPNNPLGRYALRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIK
+ ALFTQVKTGTPVKVINQPVKFSVEPNGVRYVEVHRPLSSEKEQNVQTMSYVLPAEFTS
+ FRNAKEVDSSLVDKALYRRAGHPVSVSAGQTPVVNTTVVESAQNGFVGEEGQTRATQ"
+ misc_feature complement(1553456..1554325)
+ /locus_tag="SARI_01604"
+ /note="L,D-transpeptidase; Provisional; Region: PRK10190"
+ /db_xref="CDD:182294"
+ misc_feature complement(1554128..1554262)
+ /locus_tag="SARI_01604"
+ /note="Lysine Motif is a small domain involved in binding
+ peptidoglycan; Region: LysM; cd00118"
+ /db_xref="CDD:212030"
+ misc_feature complement(1553684..1554088)
+ /locus_tag="SARI_01604"
+ /note="L,D-transpeptidase catalytic domain; Region: YkuD;
+ pfam03734"
+ /db_xref="CDD:217702"
+ gene complement(1554534..1554950)
+ /locus_tag="SARI_01605"
+ CDS complement(1554534..1554950)
+ /locus_tag="SARI_01605"
+ /inference="protein motif:HMMPfam:IPR003808"
+ /inference="similar to AA sequence:INSD:CAD01991.1"
+ /note="Acts with SufS to catalyze the formation of
+ L-alanine from L-cysteine"
+ /codon_start=1
+ /transl_table=11
+ /product="cysteine desufuration protein SufE"
+ /protein_id="YP_001570641.1"
+ /db_xref="GI:161503529"
+ /db_xref="InterPro:IPR003808"
+ /translation="MAALPDKEKLLRNFTRCANWEEKYLYIIDLGQRLAELNTQDRNP
+ QNRIQGCQSQVWIVIGRNADGIIELQGDSDAAIVKGLMAVVFILYHHMTAQDIVHFDV
+ RPWFEKMALTQHLTPSRSQGLEAMIRAIRAKAATLS"
+ misc_feature complement(1554537..1554950)
+ /locus_tag="SARI_01605"
+ /note="cysteine desufuration protein SufE; Provisional;
+ Region: PRK09296"
+ /db_xref="CDD:181767"
+ gene complement(1554963..1556183)
+ /locus_tag="SARI_01606"
+ CDS complement(1554963..1556183)
+ /locus_tag="SARI_01606"
+ /inference="protein motif:HMMPfam:IPR000192"
+ /inference="protein motif:HMMTigr:IPR010970"
+ /inference="protein motif:ScanRegExp:IPR000192"
+ /inference="similar to AA sequence:INSD:CAD01992.1"
+ /note="catalyzes the formation of L-alanine and selenide
+ or sulfanylcysteine from selenocysteine or cysteine"
+ /codon_start=1
+ /transl_table=11
+ /product="bifunctional cysteine desulfurase/selenocysteine
+ lyase"
+ /protein_id="YP_001570642.1"
+ /db_xref="GI:161503530"
+ /db_xref="InterPro:IPR000192"
+ /db_xref="InterPro:IPR010970"
+ /translation="MTFPVEKVRADFPILQREVNGLPLAYLDSAASAQKPNQVIDAES
+ AFYRHGYAAVHRGIHTLSAQATESMENVRKQASRFINARSAEELIFVRGTTEGINLVA
+ NSWGAENIRAGDNIIISEMEHHANIVPWQMLCERKGAELRVIPLNPDGTLRLEVLATL
+ FDDRTRLLAITHVSNVLGTENPLPEMIAQARQHGAKVLVDGAQAVMHHAVDVQALDCD
+ FYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSMIATVSLAQGTTWAKAPWRFEA
+ GTPNTGGIIGLGAAIDYVASLGLDKIGDYEQMLMHYALEQLAQVPDIRLYGPAQRLGV
+ IAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAWYGVPAMCRASLAMYNTYEEVD
+ RLVAGLTRIYRLLG"
+ misc_feature complement(1554981..1556183)
+ /locus_tag="SARI_01606"
+ /note="Selenocysteine lyase/Cysteine desulfurase
+ [Posttranslational modification, protein turnover,
+ chaperones]; Region: csdA; COG0520"
+ /db_xref="CDD:223594"
+ misc_feature complement(1554990..1556108)
+ /locus_tag="SARI_01606"
+ /note="Cysteine desulfurase (SufS)-like. This family
+ belongs to the pyridoxal phosphate (PLP)-dependent
+ aspartate aminotransferase superfamily (fold I). The major
+ groups in this CD correspond to cysteine desulfurase
+ (SufS) and selenocysteine lyase. SufS...; Region:
+ SufS_like; cd06453"
+ /db_xref="CDD:99746"
+ misc_feature complement(order(1555506..1555511,1555515..1555517,
+ 1555575..1555580,1555584..1555586,1555815..1555817,
+ 1555890..1555892,1555899..1555904))
+ /locus_tag="SARI_01606"
+ /note="pyridoxal 5'-phosphate binding pocket [chemical
+ binding]; other site"
+ /db_xref="CDD:99746"
+ misc_feature complement(1555506..1555508)
+ /locus_tag="SARI_01606"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:99746"
+ gene complement(1556186..1557451)
+ /locus_tag="SARI_01607"
+ CDS complement(1556186..1557451)
+ /locus_tag="SARI_01607"
+ /inference="protein motif:HMMPfam:IPR000825"
+ /inference="protein motif:HMMTigr:IPR011542"
+ /inference="similar to AA sequence:INSD:AAL20296.1"
+ /note="with SufBC activates cysteine desulfurase SufS"
+ /codon_start=1
+ /transl_table=11
+ /product="cysteine desulfurase activator complex subunit
+ SufD"
+ /protein_id="YP_001570643.1"
+ /db_xref="GI:161503531"
+ /db_xref="InterPro:IPR000825"
+ /db_xref="InterPro:IPR011542"
+ /translation="MAGLPNSSKALQQWRHLFEEQGESRTEEARQHLQQMLRLGLPTR
+ KHEDWKYTPLDGFAHSQFIQQFAAISAAQRDALALKNDAVRLVFVDGRFMPELSDSTQ
+ NSGFDVSVRDERQTLAAPVQPEIFLHLTESLAHCVTYIQVRRNQRPVKPLLLMHITQG
+ VDGDELNTAHYRHHLSLAEGAEATVIEHYVSHGEAKHFTGARLTMKVAENARLRHIKL
+ TFENASSYHFAHNDLLLATDASAFSHCFLLGAAVLRHHTSTQLNGENATLRLNSLAMP
+ VKNEVCDTRTWLEHNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNN
+ LLLGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLQSRGIRQQEARHMILYA
+ FAAELTEAIHDSTLKQQVLARIGQRLPGG"
+ misc_feature complement(1556189..1557451)
+ /locus_tag="SARI_01607"
+ /note="cysteine desulfurase activator complex subunit
+ SufD; Provisional; Region: PRK10948"
+ /db_xref="CDD:236804"
+ misc_feature complement(1556222..1557061)
+ /locus_tag="SARI_01607"
+ /note="FeS assembly protein SufD; Region: sufD; TIGR01981"
+ /db_xref="CDD:233666"
+ gene complement(1557426..1558172)
+ /gene="sufC"
+ /locus_tag="SARI_01608"
+ CDS complement(1557426..1558172)
+ /gene="sufC"
+ /locus_tag="SARI_01608"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPanther:IPR010230"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR010230"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:REFSEQ:YP_150730.1"
+ /note="part of SUF system involved in inserting
+ iron-sulfur clusters into proteins; in Escherichia coli
+ this protein forms a complex with SufBD; the SufBCD
+ complex stimulates the cysteine desulfurase SufS in
+ conjunction with SufE"
+ /codon_start=1
+ /transl_table=11
+ /product="cysteine desulfurase ATPase component"
+ /protein_id="YP_001570644.1"
+ /db_xref="GI:161503532"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR010230"
+ /translation="MLNIKGLHVSVEEKAILRGLNLEVRPGEVHAIMGPNGSGKSTLS
+ ATLAGREEYEVTGGSVTFNGKDLLELSPEERAGEGIFMAFQYPVEIPGVSNQFFLQTA
+ LNAVRAYRGQASLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDILQMA
+ VLEPELCILDESDSGLDIDALKIVAEGVNALRDDKRAFIIVTHYQRILDYIKPDYVHV
+ LYQGRIVRSGDFTLVKQLEEQGYGWLTEQQ"
+ misc_feature complement(1557429..1558172)
+ /gene="sufC"
+ /locus_tag="SARI_01608"
+ /note="cysteine desulfurase ATPase component; Reviewed;
+ Region: sufC; PRK09580"
+ /db_xref="CDD:181965"
+ misc_feature complement(1557450..1558169)
+ /gene="sufC"
+ /locus_tag="SARI_01608"
+ /note="ABC-type transport system involved in Fe-S cluster
+ assembly, ATPase component; Region: ABC_FeS_Assembly;
+ cd03217"
+ /db_xref="CDD:213184"
+ misc_feature complement(1558050..1558073)
+ /gene="sufC"
+ /locus_tag="SARI_01608"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213184"
+ misc_feature complement(order(1557564..1557566,1557660..1557665,
+ 1557918..1557920,1558047..1558055,1558059..1558064))
+ /gene="sufC"
+ /locus_tag="SARI_01608"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213184"
+ misc_feature complement(1557918..1557929)
+ /gene="sufC"
+ /locus_tag="SARI_01608"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213184"
+ misc_feature complement(1557708..1557737)
+ /gene="sufC"
+ /locus_tag="SARI_01608"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213184"
+ misc_feature complement(1557660..1557677)
+ /gene="sufC"
+ /locus_tag="SARI_01608"
+ /note="Walker B; other site"
+ /db_xref="CDD:213184"
+ misc_feature complement(1557642..1557653)
+ /gene="sufC"
+ /locus_tag="SARI_01608"
+ /note="D-loop; other site"
+ /db_xref="CDD:213184"
+ misc_feature complement(1557558..1557578)
+ /gene="sufC"
+ /locus_tag="SARI_01608"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213184"
+ gene complement(1558189..1559676)
+ /locus_tag="SARI_01609"
+ CDS complement(1558189..1559676)
+ /locus_tag="SARI_01609"
+ /inference="protein motif:HMMPfam:IPR000825"
+ /inference="protein motif:HMMTigr:IPR010231"
+ /inference="similar to AA sequence:INSD:AAL20294.1"
+ /note="with SufCD activates cysteine desulfurase SufS"
+ /codon_start=1
+ /transl_table=11
+ /product="cysteine desulfurase activator complex subunit
+ SufB"
+ /protein_id="YP_001570645.1"
+ /db_xref="GI:161503533"
+ /db_xref="InterPro:IPR000825"
+ /db_xref="InterPro:IPR010231"
+ /translation="MSRNTEATEEVGIWTGGRLNYKEGFFTQLPTDELAKGISEEVVR
+ AISAKRNEPEWMLEFRLNAYRSWLEMDEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDS
+ CVSQPGAVQQTGANTFLSKEVEDAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLA
+ EQGIIFCSFGEAIHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCP
+ MELSTYFRINAEKTGQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKD
+ AEVKYSTVQNWFPGDNNTGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCIL
+ RGDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKI
+ MPTATNARNFTQCDSMLIGTDCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQ
+ RGISEEDAISMIVNGFCKDVFSELPLEFAVEAQKLLAISLEHSVG"
+ misc_feature complement(1558192..1559676)
+ /locus_tag="SARI_01609"
+ /note="cysteine desulfurase activator complex subunit
+ SufB; Provisional; Region: PRK11814"
+ /db_xref="CDD:236990"
+ misc_feature complement(1558192..1559616)
+ /locus_tag="SARI_01609"
+ /note="putative ABC transporter; Region: ycf24; CHL00085"
+ /db_xref="CDD:214359"
+ gene complement(1559685..1560053)
+ /gene="sufA"
+ /locus_tag="SARI_01610"
+ CDS complement(1559685..1560053)
+ /gene="sufA"
+ /locus_tag="SARI_01610"
+ /inference="protein motif:BlastProDom:IPR000361"
+ /inference="protein motif:HMMPanther:IPR000361"
+ /inference="protein motif:HMMPfam:IPR000361"
+ /inference="protein motif:HMMTigr:IPR000361"
+ /inference="protein motif:HMMTigr:IPR011298"
+ /inference="protein motif:ScanRegExp:IPR000361"
+ /inference="similar to AA sequence:INSD:AAV77420.1"
+ /note="functions as a scaffold on which iron-sulfur
+ clusters ([2Fe-2S]; [4Fe-4S]) are assembled; forms a
+ homodimer; similar to IscA protein"
+ /codon_start=1
+ /transl_table=11
+ /product="iron-sulfur cluster assembly scaffold protein"
+ /protein_id="YP_001570646.1"
+ /db_xref="GI:161503534"
+ /db_xref="InterPro:IPR000361"
+ /db_xref="InterPro:IPR011298"
+ /translation="MELHSGTFNPEDFPWQGLTLTPAAAAHIRELAAKQPGILGVRLS
+ VKQTGCAGFGYVLDTVREPDKDDLVFEAEGAKLFVPLKAMPFIDGTEVDYVQEGLNQL
+ FKFHNPKAQNECGCGESFGV"
+ misc_feature complement(1559688..1560053)
+ /gene="sufA"
+ /locus_tag="SARI_01610"
+ /note="iron-sulfur cluster assembly scaffold protein;
+ Provisional; Region: sufA; PRK09504"
+ /db_xref="CDD:181915"
+ gene 1560479..1560799
+ /locus_tag="SARI_01611"
+ CDS 1560479..1560799
+ /locus_tag="SARI_01611"
+ /inference="protein motif:HMMPfam:IPR001991"
+ /inference="similar to AA sequence:INSD:CAD01997.1"
+ /note="'KEGG: eci:UTI89_C4668 0.00083 gltP;
+ glutamate-aspartate symport protein K03309;
+ COG: COG1823 Predicted Na+/dicarboxylate symporter;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570647.1"
+ /db_xref="GI:161503535"
+ /db_xref="InterPro:IPR001991"
+ /translation="MVVTLAYIALFLVFSWAILRINQKSDSLSKSVFIAIFLGAIIGL
+ SLHFISTNHTKTIIEWYSIVGNGYVNLLKLVAIPLIFISILSAINKLENSAGIGKVSL
+ TIVA"
+ misc_feature 1560479..>1560793
+ /locus_tag="SARI_01611"
+ /note="Sodium:dicarboxylate symporter family; Region: SDF;
+ cl00573"
+ /db_xref="CDD:241958"
+ gene 1560861..1560927
+ /locus_tag="SARI_01612"
+ misc_RNA 1560861..1560927
+ /locus_tag="SARI_01612"
+ /product="RydB RNA"
+ /inference="nucleotide motif:Rfam:RF00118"
+ /note="Rfam score 75.23"
+ gene complement(1561081..1561320)
+ /locus_tag="SARI_01613"
+ CDS complement(1561081..1561320)
+ /locus_tag="SARI_01613"
+ /inference="similar to AA sequence:INSD:AAV77422.1"
+ /note="'COG: NOG11331 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570648.1"
+ /db_xref="GI:161503536"
+ /translation="MQKKVVYCARLPISEDDMSTDLDPAQLAIEFLRRDKTELSPAQY
+ LKRLKQLELEFADLLALSSTELKEEIYFAWRLGVH"
+ gene complement(1561368..1561778)
+ /locus_tag="SARI_01614"
+ CDS complement(1561368..1561778)
+ /locus_tag="SARI_01614"
+ /inference="protein motif:HMMPfam:IPR006683"
+ /inference="protein motif:HMMTigr:IPR003736"
+ /inference="similar to AA sequence:INSD:AAL20290.1"
+ /note="'KEGG: eco:b1686 4.1e-64 ydiI; hypothetical
+ protein;
+ COG: COG2050 Uncharacterized protein, possibly involved in
+ aromatic compounds catabolism;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570649.1"
+ /db_xref="GI:161503537"
+ /db_xref="InterPro:IPR003736"
+ /db_xref="InterPro:IPR006683"
+ /translation="MIWKREVTLDALNAMGEGNMVGLLDIRFEHIGDDTLEATMPVDH
+ RTKQPFGLLHGGASVVLAESIGSVAGYLCTQGEQKVVGLEVNANHVRSARQGRVRGVC
+ KALHTGARHQVWQIDIFDEQGRLCCSSRLTTAIV"
+ misc_feature complement(1561374..1561712)
+ /locus_tag="SARI_01614"
+ /note="PaaI_thioesterase is a tetrameric acyl-CoA
+ thioesterase with a hot dog fold and one of several
+ proteins responsible for phenylacetic acid (PA)
+ degradation in bacteria. Although orthologs of PaaI exist
+ in archaea and eukaryotes, their function has not...;
+ Region: PaaI_thioesterase; cd03443"
+ /db_xref="CDD:239527"
+ misc_feature complement(order(1561503..1561514,1561533..1561535,
+ 1561620..1561622))
+ /locus_tag="SARI_01614"
+ /note="CoenzymeA binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:239527"
+ misc_feature complement(order(1561512..1561514,1561518..1561532,
+ 1561602..1561604,1561611..1561613,1561617..1561619))
+ /locus_tag="SARI_01614"
+ /note="subunit interaction site [polypeptide binding];
+ other site"
+ /db_xref="CDD:239527"
+ misc_feature complement(order(1561533..1561535,1561575..1561580,
+ 1561587..1561592,1561614..1561616))
+ /locus_tag="SARI_01614"
+ /note="PHB binding site; other site"
+ /db_xref="CDD:239527"
+ gene complement(1561775..1564834)
+ /locus_tag="SARI_01615"
+ CDS complement(1561775..1564834)
+ /locus_tag="SARI_01615"
+ /inference="protein motif:Gene3D:IPR012285"
+ /inference="protein motif:HMMPfam:IPR004113"
+ /inference="protein motif:HMMPfam:IPR006094"
+ /inference="protein motif:ScanRegExp:IPR001450"
+ /inference="protein motif:superfamily:IPR009051"
+ /note="'KEGG: eci:UTI89_C1879 0. ydiJ; hypothetical
+ protein YdiJ;
+ COG: COG0247 Fe-S oxidoreductase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570650.1"
+ /db_xref="GI:161503538"
+ /db_xref="InterPro:IPR001450"
+ /db_xref="InterPro:IPR004113"
+ /db_xref="InterPro:IPR006094"
+ /db_xref="InterPro:IPR009051"
+ /db_xref="InterPro:IPR012285"
+ /translation="MIPQISQAPGVVQLVLNFLQALEQQGFTGDTATSYADRLTMSTD
+ NSIYQLLPDAVVFPRSTADVALLARLAAEPRFTSLVFTPRGGGTGTNGQALNQGIIVD
+ MSRYMNRIIEINPEEGWVRVEAGVIKDQLNQALKPYGYFFAPELSTSNRATLGGMINT
+ DASGQGSLVYGKTSDHVLGIRAVLLGGDILDTQSMPVELAQTLGENNTTPGRIYQTVY
+ QSCRENRQLILDSFPKLNRFLTGYDLRHVFNDDMTRFDLTRILTGSEGTLAFITEARL
+ DITPIPKVRRLVNVKYDSFDSALRNAPFMVDARALSVETVDSKVLNLAREDIVWHSVS
+ ELITDVPDKEMLGLNIVEFAGDDEALIDGQVTALCQRLDGLMARAEAGVIGWQLCTDL
+ TGIERIYAMRKKAVGLLGNAKGSAKPIPFAEDTCVPPEHLANYIAEFRALLDGHGLSY
+ GMFGHVDAGVLHVRPALDMCDPQQELLMKQISDEVVALTARYGGLLWGEHGKGFRAEY
+ SPAFFGEVLYGELRKIKAAFDPHNRLNPGKICPPQGIEEAPMMKVDAVKRGTWDRQIP
+ LAVRQTWRGAMECNGNGLCFNFDAKSPMCPSMKISLNRIHSPKGRATLVREWLRLLAD
+ RGVDPLKLEKDLPEKRASLRTLIARTRNSWHWRKGEYDFSHEVKEAMSGCLACKACST
+ QCPIKIDVPEFRSRFLQLYHTRYLRPVRDHLVATVETYAPLMARAPKTFNFFINQPMV
+ RNLAKKHIGMVDLPLLSAPSLQQQLVGHPSANMTLEQLERMSAEQKAKTVLVVQDPFT
+ SYYDARVVADFISLAEKLGRRPVLLPFSPNGKAQHIKGFLNRFAKTAKKTSEFLNRIA
+ ALGMPMVGVDPALVLCYRDEYKLALGEQRGDFHVLLVNEWLAQEINARLSVEVSGEPW
+ YFFGHCTEVTALPGAPAQWAAIFAHFGAKLENVSVGCCGMAGTYGHELTNHQNSLGIY
+ ELSWHQAMQRLPRNRCLATGYSCRSQVKRIEGTGVRHPLQALLEIIG"
+ misc_feature complement(1563206..1564744)
+ /locus_tag="SARI_01615"
+ /note="FAD/FMN-containing dehydrogenases [Energy
+ production and conversion]; Region: GlcD; COG0277"
+ /db_xref="CDD:223354"
+ misc_feature complement(1564259..1564681)
+ /locus_tag="SARI_01615"
+ /note="FAD binding domain; Region: FAD_binding_4;
+ pfam01565"
+ /db_xref="CDD:216574"
+ misc_feature complement(1561778..1563130)
+ /locus_tag="SARI_01615"
+ /note="Fe-S oxidoreductase [Energy production and
+ conversion]; Region: GlpC; COG0247"
+ /db_xref="CDD:223325"
+ gene 1565098..1566216
+ /locus_tag="SARI_01616"
+ CDS 1565098..1566216
+ /locus_tag="SARI_01616"
+ /inference="protein motif:HMMPfam:IPR002549"
+ /inference="similar to AA sequence:INSD:AAL20288.1"
+ /note="'YdiK; inner membrane protein; ydiK promoter
+ presents a PurR sequence, suggesting that its expression
+ is purine-regulated; unknown function'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative inner membrane protein"
+ /protein_id="YP_001570651.1"
+ /db_xref="GI:161503539"
+ /db_xref="InterPro:IPR002549"
+ /translation="MVNVRQPRDIAQALLSVLFLAIMIVACLWIVQPFILGFAWAGTI
+ VIATWPVLLKLQKILWGRRSLAVLVMTLLLVLLFVIPVALLVNSIVDGSGPLIHAVTG
+ GDMTLPNLAWLNTIPLVGAKLYAGWHSLLDMGGSAIMAKVRPYIGTTTTWFVGQAAHI
+ GRFMMHCALMLLFSALLYWRGEQVAMGIRHFACRLAAKRGDAAVLLAAQAIRAVALGV
+ VVTALVQAVLGGIGLAISGVPYATLLTVVMILSCLVQLGPLPVLIPAIIWLYWTGDTT
+ WGTVLLVWSAVVGTLDNVIRPVLIRMGADLPLLLILSGVIGGLIAFGMIGLFIGPVLL
+ AVTWRLFSAWVHEVPAPTNEPEEILEELDEIEEANKHS"
+ misc_feature 1565098..1566156
+ /locus_tag="SARI_01616"
+ /note="putative inner membrane protein; Provisional;
+ Region: PRK10983"
+ /db_xref="CDD:182881"
+ misc_feature 1565137..1566132
+ /locus_tag="SARI_01616"
+ /note="Domain of unknown function DUF20; Region: UPF0118;
+ pfam01594"
+ /db_xref="CDD:216594"
+ gene 1566399..1566506
+ /locus_tag="SARI_01617"
+ misc_RNA 1566399..1566506
+ /locus_tag="SARI_01617"
+ /product="RprA RNA"
+ /inference="nucleotide motif:Rfam:RF00034"
+ /note="Rfam score 111.69"
+ gene 1566535..1567326
+ /gene="aroD"
+ /locus_tag="SARI_01618"
+ CDS 1566535..1567326
+ /gene="aroD"
+ /locus_tag="SARI_01618"
+ /inference="protein motif:BlastProDom:IPR001381"
+ /inference="protein motif:Gene3D:IPR001381"
+ /inference="protein motif:HMMPfam:IPR001381"
+ /inference="protein motif:HMMTigr:IPR001381"
+ /inference="protein motif:ScanRegExp:IPR001381"
+ /inference="similar to AA sequence:INSD:CAD02002.1"
+ /note="catalyzes the dehydration of 3-dehydroquinate to
+ form 3-dehydroshikimate in aromatic amino acid
+ biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="3-dehydroquinate dehydratase"
+ /protein_id="YP_001570652.1"
+ /db_xref="GI:161503540"
+ /db_xref="InterPro:IPR001381"
+ /translation="MARRQKTDRTRMKTVTVKNLIIGEGMPKIIVSLMGRDINRVKAE
+ MLAYREATFDILEWRVDHFTDIASTQSVLTAARAIRDAMPDIPLLFTFRSAKEGGEQT
+ IPTQHYLALNRAAIDSGLVDMIDLELFTGDADVKATVDYAHAHNVYVVMSNHDFHQTP
+ PAEEIVLRLRKMQALGADIAKIAVMPQSQHDVLTLLTATLEMRQRYADGPVITMSMAK
+ EGIISRLAGEVFGSAATFGAVTQASAPGQIAVNDLRSVLMILHNA"
+ misc_feature 1566610..1567323
+ /gene="aroD"
+ /locus_tag="SARI_01618"
+ /note="3-dehydroquinate dehydratase [Amino acid transport
+ and metabolism]; Region: AroD; COG0710"
+ /db_xref="CDD:223782"
+ misc_feature 1566616..1567311
+ /gene="aroD"
+ /locus_tag="SARI_01618"
+ /note="Type I 3-dehydroquinase, (3-dehydroquinate
+ dehydratase or DHQase); Region: DHQase_I; cd00502"
+ /db_xref="CDD:188633"
+ misc_feature order(1566628..1566630,1566703..1566705,1566709..1566711,
+ 1566811..1566813,1566994..1566996,1567075..1567077,
+ 1567204..1567206,1567261..1567266,1567273..1567275)
+ /gene="aroD"
+ /locus_tag="SARI_01618"
+ /note="active site"
+ /db_xref="CDD:188633"
+ misc_feature 1567075..1567077
+ /gene="aroD"
+ /locus_tag="SARI_01618"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:188633"
+ misc_feature order(1567111..1567113,1567123..1567125,1567132..1567134,
+ 1567207..1567212,1567222..1567224,1567288..1567290,
+ 1567300..1567302,1567309..1567311)
+ /gene="aroD"
+ /locus_tag="SARI_01618"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:188633"
+ gene complement(1567429..1569807)
+ /locus_tag="SARI_01619"
+ CDS complement(1567429..1569807)
+ /locus_tag="SARI_01619"
+ /inference="protein motif:BlastProDom:IPR000121"
+ /inference="protein motif:Gene3D:IPR013815"
+ /inference="protein motif:HMMPfam:IPR000121"
+ /inference="protein motif:HMMPfam:IPR002192"
+ /inference="protein motif:HMMPfam:IPR008279"
+ /inference="protein motif:HMMTigr:IPR006319"
+ /inference="protein motif:ScanRegExp:IPR000121"
+ /inference="protein motif:ScanRegExp:IPR008279"
+ /note="catalyzes the formation of phosphoenolpyruvate from
+ pyruvate"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphoenolpyruvate synthase"
+ /protein_id="YP_001570653.1"
+ /db_xref="GI:161503541"
+ /db_xref="InterPro:IPR000121"
+ /db_xref="InterPro:IPR002192"
+ /db_xref="InterPro:IPR006319"
+ /db_xref="InterPro:IPR008279"
+ /db_xref="InterPro:IPR013815"
+ /translation="MSNNGSSPLVLWYNQLGMNDVDRVGGKNASLGEMITNLSGMGVS
+ VPNGFATTADAFNQFLDQSGVNQRIYELLDKTDIDDVSQLAKAGTQIRQWIIDTPFQP
+ ALENAIRDAYAQLSSDDENASFAVRSSATAEDMPDASFAGQQETFLNVQGFDAVLVAV
+ KHVFASLFNDRAISYRVHQGYDHRGVALSAGVQRMVRSDLASSGVMFSIDTESGFDQV
+ VFITSAWGLGEMVVQGAVNPDEFYVHKSTLAAGRPAIVRRTMGSKKIRMVYAATQEHG
+ KQVKIEDVPQEQRDIFSLTNEEVQELAKQAVQIEQHYGRPMDIEWAKDGHTGKLFIVQ
+ ARPETVRSRGQVMERYTLHAQGKIIAEGRAIGHRIGAGMVKVIHDIGEMNRIEPGDVL
+ VTDMTDPDWEPIMKKAAAIVTNRGGRTCHAAIIARELGIPAVVGCGDATERMKDGEKV
+ TVSCAEGDTGYVYADMLDFSVKSSSIDTMPDLPLKIMMNVGNPDRAFDFACLPNEGVG
+ LARLEFIINRMIGVHPRALLEFDDQDAALQNDIRELMKGFDSPREFYVGRLTEGIATL
+ GAAFYPKRVIVRLSDFKSNEYANLIGGERYEPHEENPMLGFRGAGRYVAESFRDCFAL
+ ECEAVKRVRNDMGLTNIEIMIPFVRTVDQAKAVVEELARQGLKRGENGLKIIMMCEIP
+ SNALLAEQFLDYFDGFSIGSNDMTQLALGLDRDSGVVSELFDERNDAVKALLSMAIRA
+ AKKQGKYVGICGQGPSDHEDFAAWLMEEGIDSLSLNPDTVVQTWLSLAELKK"
+ misc_feature complement(1567432..1569792)
+ /locus_tag="SARI_01619"
+ /note="phosphoenolpyruvate synthase; Validated; Region:
+ PRK06464"
+ /db_xref="CDD:235809"
+ misc_feature complement(1568722..1569753)
+ /locus_tag="SARI_01619"
+ /note="Pyruvate phosphate dikinase, PEP/pyruvate binding
+ domain; Region: PPDK_N; pfam01326"
+ /db_xref="CDD:216434"
+ misc_feature complement(1568452..1568652)
+ /locus_tag="SARI_01619"
+ /note="PEP-utilising enzyme, mobile domain; Region:
+ PEP-utilizers; pfam00391"
+ /db_xref="CDD:201201"
+ misc_feature complement(1567468..1568358)
+ /locus_tag="SARI_01619"
+ /note="PEP-utilising enzyme, TIM barrel domain; Region:
+ PEP-utilizers_C; pfam02896"
+ /db_xref="CDD:217274"
+ gene 1569854..1569985
+ /locus_tag="SARI_01620"
+ CDS 1569854..1569985
+ /locus_tag="SARI_01620"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570654.1"
+ /db_xref="GI:161503542"
+ /translation="MRIYPGIFKPVKKTVNRSSKFIFHFFRLFTYLRKLTHSAPFPQ"
+ gene 1570134..1570976
+ /locus_tag="SARI_01621"
+ CDS 1570134..1570976
+ /locus_tag="SARI_01621"
+ /inference="protein motif:HMMPfam:IPR005177"
+ /inference="similar to AA sequence:INSD:CAD02004.1"
+ /note="'COG: COG1806 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570655.1"
+ /db_xref="GI:161503543"
+ /db_xref="InterPro:IPR005177"
+ /translation="MNRMDNVVDRHVFYISDGTAITAEVLGHAVMSQFPVTISSITLP
+ FVENESRARAVKDQIDAIYHQTGVRPLVFYSIVLPEIRAIILQSEGFCQDIVQALVAP
+ LQQEMKLDPTPIAHRTHGLNPGNLNKYDARIAAIDYTLAHDDGISLRNLDQAQVILLG
+ VSRCGKTPTSLYLAMQFGIRAANYPFIADDMDNLTLPTSLKPLQHKLFGLTIDPERLA
+ AIREERRENSRYASLRQCRMEVAEVEALYRKNQIPCLNSTNYSVEEIATKILDIMGLN
+ RRMY"
+ misc_feature 1570161..1570973
+ /locus_tag="SARI_01621"
+ /note="PEP synthetase regulatory protein; Provisional;
+ Region: PRK05339"
+ /db_xref="CDD:235419"
+ gene 1571132..1572178
+ /locus_tag="SARI_01622"
+ CDS 1571132..1572178
+ /locus_tag="SARI_01622"
+ /inference="protein motif:Gene3D:IPR006218"
+ /inference="protein motif:HMMPfam:IPR006218"
+ /inference="protein motif:HMMPIR:IPR006219"
+ /inference="protein motif:HMMTigr:IPR006219"
+ /inference="similar to AA sequence:REFSEQ:YP_150741.1"
+ /note="tryptophan sensitive; catalyzes the formation of
+ 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from
+ phosphoenolpyruvate and D-erythrose 4-phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="phospho-2-dehydro-3-deoxyheptonate aldolase"
+ /protein_id="YP_001570656.1"
+ /db_xref="GI:161503544"
+ /db_xref="InterPro:IPR006218"
+ /db_xref="InterPro:IPR006219"
+ /translation="MNRTDELRTARIDSLVTPSELAQRYPVSSSVASHVTDSRRRIEK
+ ILNGEDPRLLVVIGPCSIHDLNAAMEYATQLHTQRQKHQARLEIVMRTYFEKPRTVVG
+ WKGLISDPDLNGSYRVNHGLELARRLLLQVNELGVPTATEFLDMVTGQFIADLISWGA
+ IGARTTESQIHREMASALSCPVGFKNGTDGNTRIAVDAIRASRASHMFLSPDKDGQMT
+ IYQTSGNPYGHIIMRGGKKPNYYAEDIAAACDTLHEFDLPEHLVVDFSHGNCQKQHRR
+ QLDVCDDICQQIRNGSTAIVGIMAESFLREGTQKIISGQPLIYGQSITDPCLSWEATE
+ ILLEKLAAAVDSRF"
+ misc_feature 1571132..1572175
+ /locus_tag="SARI_01622"
+ /note="phospho-2-dehydro-3-deoxyheptonate aldolase;
+ Provisional; Region: PRK12756"
+ /db_xref="CDD:183726"
+ misc_feature 1571258..1572145
+ /locus_tag="SARI_01622"
+ /note="DAHP synthetase I family; Region: DAHP_synth_1;
+ pfam00793"
+ /db_xref="CDD:216123"
+ gene 1572346..1572528
+ /locus_tag="SARI_01623"
+ CDS 1572346..1572528
+ /locus_tag="SARI_01623"
+ /inference="similar to AA sequence:REFSEQ:NP_456165.1"
+ /note="'COG: COG4256 Hemin uptake protein;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570657.1"
+ /db_xref="GI:161503545"
+ /translation="MDNTELPHPKEIDNETLLPAAERRVNSQALLGPDGKVIIDHNGQ
+ EYLLRKTQAGKLLLTK"
+ misc_feature 1572358..1572525
+ /locus_tag="SARI_01623"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10183"
+ /db_xref="CDD:182290"
+ gene complement(1572563..1574005)
+ /locus_tag="SARI_01624"
+ CDS complement(1572563..1574005)
+ /locus_tag="SARI_01624"
+ /inference="protein motif:HMMPfam:IPR003846"
+ /inference="similar to AA sequence:SwissProt:Q8ZPS5"
+ /note="'COG: COG0397 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570658.1"
+ /db_xref="GI:161503546"
+ /db_xref="InterPro:IPR003846"
+ /translation="MTLSFTAHWRDELPATYTALLPTPLKNARLIWYNDKLAQQLAIP
+ ASLFDVTNGAGVWGGETLLPGMSPVAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGS
+ TLDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDTPVQ
+ RETQEAGAMLMRLAQSHMRFGHFEHFYYRREPEKVQQLADFAIRHYWPQWQDAPEKYD
+ LWFEEVAARTGRLIADWQTIGFAHGVMNTDNMSILGLTIDYGPFGFLDDYDPGFIGNH
+ SDHQGRYRFDNQPSVALWNLQRLAQTLTPFIEIDALNRALDRYQDALLTRYGQRMRQK
+ LGFFTEQKDDNVLLNELFSLMAREGSDYTRTFRMLSHTEQQSASSPLRDTFIDRAAFD
+ GWFDRYRARLRTEAVDDALRQQQMQSVNPAVVLRNWLAQRAIDAAEQGDMAELHRLHE
+ ILRQPFIDRDDDYASRPPEWGKRLEVSCSS"
+ misc_feature complement(1572566..1574005)
+ /locus_tag="SARI_01624"
+ /note="Uncharacterized conserved protein [Function
+ unknown]; Region: COG0397"
+ /db_xref="CDD:223474"
+ misc_feature complement(1572566..1574005)
+ /locus_tag="SARI_01624"
+ /note="hypothetical protein; Validated; Region: PRK00029"
+ /db_xref="CDD:234583"
+ gene complement(1574067..1574780)
+ /locus_tag="SARI_01625"
+ CDS complement(1574067..1574780)
+ /locus_tag="SARI_01625"
+ /inference="similar to AA sequence:REFSEQ:YP_150744.1"
+ /note="'COG: COG2200 FOG: EAL domain;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570659.1"
+ /db_xref="GI:161503547"
+ /translation="MIASLDELYHSELFFLPAMDKNARLVGLEIIATFATEDGAVRMP
+ TELVAPRLSVEEQYCLFVEKLALLETCQHFFIQHKLIAWLNLPPAISGLLLLDSELFS
+ RAARFPFLELAINENYPGLNHGKENETLAHLAMHFPLMLANFGAGEASTKAIFDGLFK
+ RIMLDKNFIQQRADMISFEPFMHAIVAQISSSCESLMIAGIDNEAMFARAAPLGFSAL
+ QGGLWPPVPVSQLIRLVQR"
+ misc_feature complement(1574070..1574747)
+ /locus_tag="SARI_01625"
+ /note="c-di-GMP phosphodiesterase class I (EAL domain)
+ [Signal transduction mechanisms]; Region: Rtn; COG2200"
+ /db_xref="CDD:225110"
+ gene complement(1575093..1575557)
+ /locus_tag="SARI_01626"
+ CDS complement(1575093..1575557)
+ /locus_tag="SARI_01626"
+ /inference="protein motif:HMMPfam:IPR000064"
+ /inference="similar to AA sequence:INSD:AAV77433.1"
+ /note="'KEGG: eci:UTI89_C1901 9.5e-72 nlpC; probable
+ lipoprotein NlpC precursor;
+ COG: COG0791 Cell wall-associated hydrolases
+ (invasion-associated proteins);
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570660.1"
+ /db_xref="GI:161503548"
+ /db_xref="InterPro:IPR000064"
+ /translation="MRFWLLVITALFMAGCSTHRAPAPNARLSDSITVIAGLDDQLQS
+ WRGTPYRYGGMSRRGVDCSGFVVVTMRDKFDLQLPRDTREQSKIGTRIDKDELLPGDL
+ VFFKTGSGESGLHVGIYDTNNEFIHASTSRGVMRSSLDNVYWRKNFWQARRI"
+ misc_feature complement(1575099..1575419)
+ /locus_tag="SARI_01626"
+ /note="NlpC/P60 family; Region: NLPC_P60; pfam00877"
+ /db_xref="CDD:189752"
+ gene complement(1575634..1576383)
+ /locus_tag="SARI_01627"
+ CDS complement(1575634..1576383)
+ /locus_tag="SARI_01627"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:INSD:"
+ /note="ATP-binding protein that acts with the
+ transmembrane protein BtuC and the solute binding protein
+ BtuF to transport vitamin B12 into the cell"
+ /codon_start=1
+ /transl_table=11
+ /product="vitamin B12-transporter ATPase"
+ /protein_id="YP_001570661.1"
+ /db_xref="GI:161503549"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MSQLMQLKDVAESTRLGPLSGEVSVGEILHLVGPNGAGKSTLLA
+ RMAGLTSGEGSIRFGGAPLETWIASKLAQHRAYLAQQQNPPFAMPVWHYLTLHQPDKT
+ RTGHLNDVADMLGLGDKLGRCVNQLSGGEWQRVRLAAVILQIHPDANPVGQLLLLDEP
+ MNSLDVAQQNALDRVLHQLCQAGIAIVMSSHDLNHTLRHAHKAWLLKRGKLIACGRRD
+ EVLTPFYLAQAYGLSFRRVDVEGHQMLILGT"
+ misc_feature complement(1575646..1576371)
+ /locus_tag="SARI_01627"
+ /note="vitamin B12-transporter ATPase; Provisional;
+ Region: PRK03695"
+ /db_xref="CDD:235150"
+ misc_feature complement(1575739..1576344)
+ /locus_tag="SARI_01627"
+ /note="ATP-binding component of iron-siderophores, vitamin
+ B12 and hemin transporters and related proteins; Region:
+ ABC_Iron-Siderophores_B12_Hemin; cd03214"
+ /db_xref="CDD:213181"
+ misc_feature complement(1576264..1576287)
+ /locus_tag="SARI_01627"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213181"
+ misc_feature complement(order(1575811..1575813,1575907..1575912,
+ 1576144..1576146,1576261..1576269,1576273..1576278))
+ /locus_tag="SARI_01627"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213181"
+ misc_feature complement(1576144..1576155)
+ /locus_tag="SARI_01627"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213181"
+ misc_feature complement(1575976..1576005)
+ /locus_tag="SARI_01627"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213181"
+ misc_feature complement(1575907..1575924)
+ /locus_tag="SARI_01627"
+ /note="Walker B; other site"
+ /db_xref="CDD:213181"
+ misc_feature complement(1575889..1575900)
+ /locus_tag="SARI_01627"
+ /note="D-loop; other site"
+ /db_xref="CDD:213181"
+ misc_feature complement(1575805..1575825)
+ /locus_tag="SARI_01627"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213181"
+ gene complement(1576383..1576934)
+ /gene="btuE"
+ /locus_tag="SARI_01628"
+ CDS complement(1576383..1576934)
+ /gene="btuE"
+ /locus_tag="SARI_01628"
+ /inference="protein motif:Gene3D:IPR012335"
+ /inference="protein motif:HMMPanther:IPR000889"
+ /inference="protein motif:HMMPfam:IPR000889"
+ /inference="protein motif:ScanRegExp:IPR000889"
+ /inference="protein motif:superfamily:IPR012336"
+ /inference="similar to AA sequence:INSD:AAL20266.1"
+ /note="similar to glutathione peroxidase; member of the
+ btuCED operon which is required for vitamin B12 transport
+ across the inner membrane"
+ /codon_start=1
+ /transl_table=11
+ /product="putative glutathione peroxidase"
+ /protein_id="YP_001570662.1"
+ /db_xref="GI:161503550"
+ /db_xref="InterPro:IPR000889"
+ /db_xref="InterPro:IPR012335"
+ /db_xref="InterPro:IPR012336"
+ /translation="MQNSLLNTHVTTIDGEATTLEKYAGKVLLIVNVASRCGLTSQYE
+ QLENIHKAWADRGFVVLGFPCNQFMGQEPGSEEEIKTYCANTWGVTFPMFSKIDVNGE
+ ARHPLYQKLIAAAPTAVAPDKSGFYERMVSKGRTPLYPDDILWNFEKFLVGRDGQVVQ
+ RFSPDMTPEDPIVMESIKIALAK"
+ misc_feature complement(1576425..1576925)
+ /gene="btuE"
+ /locus_tag="SARI_01628"
+ /note="Glutathione (GSH) peroxidase family; tetrameric
+ selenoenzymes that catalyze the reduction of a variety of
+ hydroperoxides including lipid peroxidases, using GSH as a
+ specific electron donor substrate. GSH peroxidase contains
+ one selenocysteine residue per...; Region: GSH_Peroxidase;
+ cd00340"
+ /db_xref="CDD:238207"
+ misc_feature complement(order(1576500..1576502,1576722..1576724,
+ 1576824..1576826))
+ /gene="btuE"
+ /locus_tag="SARI_01628"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:238207"
+ misc_feature complement(order(1576680..1576682,1576692..1576694,
+ 1576701..1576703,1576710..1576712,1576716..1576718,
+ 1576725..1576727))
+ /gene="btuE"
+ /locus_tag="SARI_01628"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238207"
+ gene complement(1577026..1578015)
+ /locus_tag="SARI_01629"
+ CDS complement(1577026..1578015)
+ /locus_tag="SARI_01629"
+ /inference="protein motif:HMMPfam:IPR000522"
+ /inference="similar to AA sequence:INSD:AAO68876.1"
+ /note="with BtuD and BtuF transports vitamin B12 into the
+ cell"
+ /codon_start=1
+ /transl_table=11
+ /product="vtamin B12-transporter permease"
+ /protein_id="YP_001570663.1"
+ /db_xref="GI:161503551"
+ /db_xref="InterPro:IPR000522"
+ /translation="MDNMLTFARQQQRRNVRWLLSLSLLVLLATLLSLCAGEQWIAPG
+ DWLSSRGELFVWQIRLPRTLAVLLVGASLALSGAVMQALFENPLAEPGLLGVSNGAGV
+ GLIAAVLLGQGQLPGWSLGLCAIAGALTITLILLRFARRHLSTSRLLLAGVALGIICS
+ ALMTWAIYFSTSFDLRQLMYWMMGGFGGVDWQQSWLMTALIPVLIWICCQSQPMNILA
+ LGETPARQLGLPLWLWRNLLVVATGWMVGVSVAMAGAIGFIGLVIPHILRLCGLTDHR
+ VLLPGCALAGAIALLLADVVARLALASAELPIGVVTATLGAPIFIWLLLKSAR"
+ misc_feature complement(1577029..>1577880)
+ /locus_tag="SARI_01629"
+ /note="iron-hydroxamate transporter permease subunit;
+ Provisional; Region: PRK10577"
+ /db_xref="CDD:236720"
+ misc_feature complement(1577044..1577778)
+ /locus_tag="SARI_01629"
+ /note="Transmembrane subunit (TM), of Periplasmic Binding
+ Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters involved in the uptake of siderophores, heme,
+ vitamin B12, or the divalent cations Mg2+ and Zn2+.
+ PBP-dependent ABC transporters consist of...; Region:
+ TM_ABC_iron-siderophores_like; cd06550"
+ /db_xref="CDD:119348"
+ misc_feature complement(order(1577191..1577193,1577212..1577214,
+ 1577335..1577343,1577347..1577364,1577368..1577373,
+ 1577377..1577385,1577389..1577394,1577755..1577763,
+ 1577773..1577775))
+ /locus_tag="SARI_01629"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119348"
+ misc_feature complement(order(1577044..1577046,1577053..1577058,
+ 1577065..1577067,1577074..1577079,1577086..1577088,
+ 1577242..1577244,1577467..1577469,1577476..1577481,
+ 1577515..1577517,1577521..1577526,1577533..1577535,
+ 1577542..1577547,1577554..1577559,1577566..1577571,
+ 1577575..1577577,1577737..1577739,1577752..1577754,
+ 1577758..1577760))
+ /locus_tag="SARI_01629"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119348"
+ misc_feature complement(order(1577095..1577097,1577119..1577121,
+ 1577254..1577256,1577266..1577268,1577437..1577439,
+ 1577515..1577517))
+ /locus_tag="SARI_01629"
+ /note="putative PBP binding regions; other site"
+ /db_xref="CDD:119348"
+ gene complement(1578209..1578508)
+ /gene="ihfA"
+ /locus_tag="SARI_01630"
+ CDS complement(1578209..1578508)
+ /gene="ihfA"
+ /locus_tag="SARI_01630"
+ /inference="protein motif:BlastProDom:IPR000119"
+ /inference="protein motif:Gene3D:IPR000119"
+ /inference="protein motif:HMMPfam:IPR000119"
+ /inference="protein motif:HMMSmart:IPR000119"
+ /inference="protein motif:HMMTigr:IPR005684"
+ /inference="protein motif:ScanRegExp:IPR000119"
+ /inference="protein motif:superfamily:IPR010992"
+ /inference="similar to AA sequence:SwissProt:P0A1S1"
+ /note="'This protein is one of the two subunits of
+ integration host factor, a specific DNA-binding protein
+ that functions in genetic recombination as well as in
+ transcriptional and translational control'"
+ /codon_start=1
+ /transl_table=11
+ /product="integration host factor subunit alpha"
+ /protein_id="YP_001570664.1"
+ /db_xref="GI:161503552"
+ /db_xref="InterPro:IPR000119"
+ /db_xref="InterPro:IPR005684"
+ /db_xref="InterPro:IPR010992"
+ /translation="MALTKAEMSEYLFDKLGLSKRDAKELVELFFEEIRRALENGEQV
+ KLSGFGNFDLRDKNQRPGRNPKTGEDIPITARRVVTFRPGQKLKSRVENAAPKEE"
+ misc_feature complement(1578239..1578499)
+ /gene="ihfA"
+ /locus_tag="SARI_01630"
+ /note="Integration host factor (IHF) and HU are small
+ heterodimeric members of the DNABII protein family that
+ bind and bend DNA, functioning as architectural factors in
+ many cellular processes including transcription,
+ site-specific recombination, and...; Region: HU_IHF;
+ cd00591"
+ /db_xref="CDD:238332"
+ misc_feature complement(order(1578239..1578241,1578260..1578262,
+ 1578266..1578268,1578278..1578283,1578347..1578349,
+ 1578362..1578367,1578374..1578388,1578398..1578403,
+ 1578410..1578415,1578422..1578424,1578464..1578466,
+ 1578476..1578478,1578485..1578487,1578494..1578499))
+ /gene="ihfA"
+ /locus_tag="SARI_01630"
+ /note="IHF dimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238332"
+ misc_feature complement(order(1578254..1578256,1578263..1578265,
+ 1578269..1578271,1578281..1578283,1578311..1578322,
+ 1578329..1578331,1578335..1578340,1578344..1578346,
+ 1578356..1578358,1578365..1578370,1578374..1578376,
+ 1578380..1578382,1578425..1578427,1578491..1578499))
+ /gene="ihfA"
+ /locus_tag="SARI_01630"
+ /note="IHF - DNA interface [nucleotide binding]; other
+ site"
+ /db_xref="CDD:238332"
+ gene complement(1578513..1580900)
+ /gene="pheT"
+ /locus_tag="SARI_01631"
+ CDS complement(1578513..1580900)
+ /gene="pheT"
+ /locus_tag="SARI_01631"
+ /inference="protein motif:Gene3D:IPR005121"
+ /inference="protein motif:Gene3D:IPR005147"
+ /inference="protein motif:Gene3D:IPR012340"
+ /inference="protein motif:HMMPfam:IPR002547"
+ /inference="protein motif:HMMPfam:IPR005121"
+ /inference="protein motif:HMMPfam:IPR005146"
+ /inference="protein motif:HMMPfam:IPR005147"
+ /inference="protein motif:HMMTigr:IPR004532"
+ /inference="protein motif:superfamily:IPR005121"
+ /inference="protein motif:superfamily:IPR008994"
+ /inference="protein motif:superfamily:IPR009061"
+ /note="'catalyzes a two-step reaction, first charging a
+ phenylalanine molecule by linking its carboxyl group to
+ the alpha-phosphate of ATP, followed by transfer of the
+ aminoacyl-adenylate to its tRNA; forms a tetramer of
+ alpha(2)beta(2); binds two magnesium ions per tetramer;
+ type 2 subfamily'"
+ /codon_start=1
+ /transl_table=11
+ /product="phenylalanyl-tRNA synthetase subunit beta"
+ /protein_id="YP_001570665.1"
+ /db_xref="GI:161503553"
+ /db_xref="InterPro:IPR002547"
+ /db_xref="InterPro:IPR004532"
+ /db_xref="InterPro:IPR005121"
+ /db_xref="InterPro:IPR005146"
+ /db_xref="InterPro:IPR005147"
+ /db_xref="InterPro:IPR008994"
+ /db_xref="InterPro:IPR009061"
+ /db_xref="InterPro:IPR012340"
+ /translation="MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFNG
+ VVVGEVVECAQHPNADKLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAILPGD
+ FKIKAAKLRGEPSEGMLCSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEI
+ SVTPNRADCLGIIGIARDVAVLNKASLQEPEMTPVAATISDTLPITVDATDACPRYLG
+ RVVKGINVNAPTPLWMKEKLRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIDGGI
+ VVRMAKKGETLVLLDGSEAKLDTDTLVIADHQKALAMGGIFGGEHSGVNGETQNVLLE
+ CAYFNPLSITGRARRHGLHTDASHRYERGVDPALQYKAMERATRLLLDICGGEAGPVI
+ DITNEATLPKRATITLRRSKLDRLIGHHIADEQVSDILRRLGCEVTEGQDEWKAVAPD
+ WRFDMEIEEDLVEEVARVYGYNNIPDEPIQAGLIMGTHREADLSLKRVKTMLNDKGYQ
+ EVITYSFVDPKVQQLIHPGVEALLLPNPISVEMSAMRLSLWSGLLATAVYNQNRQQNR
+ VRIFETGLRFVPDTQANLGIRQDLMLAGVICGNRYDEHWNLAKETVDFYDLKGDLEAV
+ LDLTGKLDDIQFKPEMNPALHPGQSAAIYLKDERIGFIGVVHPELERKLDLNGRTLVF
+ ELEWNSLADRIVPQAREISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNL
+ FDVYRGKGVAEGYKSLAISLILQDTNRTLEEEEIAATVAKCVEALKERFQASLRD"
+ misc_feature complement(1578516..1580900)
+ /gene="pheT"
+ /locus_tag="SARI_01631"
+ /note="phenylalanyl-tRNA synthetase subunit beta;
+ Reviewed; Region: pheT; PRK00629"
+ /db_xref="CDD:234804"
+ misc_feature complement(1580460..1580768)
+ /gene="pheT"
+ /locus_tag="SARI_01631"
+ /note="tRNA-binding-domain-containing prokaryotic
+ phenylalanly tRNA synthetase (PheRS) beta chain. PheRS
+ aminoacylate phenylalanine transfer RNAs (tRNAphe).
+ PheRSs belong structurally to class II aminoacyl tRNA
+ synthetases (aaRSs) but, as they aminoacylate...; Region:
+ tRNA_bind_bactPheRS; cd02796"
+ /db_xref="CDD:239196"
+ misc_feature complement(order(1580547..1580549,1580556..1580558,
+ 1580577..1580579,1580616..1580618,1580679..1580681,
+ 1580718..1580720))
+ /gene="pheT"
+ /locus_tag="SARI_01631"
+ /note="putative tRNA-binding site [nucleotide binding];
+ other site"
+ /db_xref="CDD:239196"
+ misc_feature complement(1579746..1580222)
+ /gene="pheT"
+ /locus_tag="SARI_01631"
+ /note="B3/4 domain; Region: B3_4; pfam03483"
+ /db_xref="CDD:202662"
+ misc_feature complement(1579488..1579691)
+ /gene="pheT"
+ /locus_tag="SARI_01631"
+ /note="tRNA synthetase B5 domain; Region: B5; smart00874"
+ /db_xref="CDD:197942"
+ misc_feature complement(1578834..1579418)
+ /gene="pheT"
+ /locus_tag="SARI_01631"
+ /note="Phenylalanyl-tRNA synthetase (PheRS) beta chain
+ core domain. PheRS belongs to class II aminoacyl-tRNA
+ synthetases (aaRS) based upon its structure. While class
+ II aaRSs generally aminoacylate the 3'-OH ribose of
+ the appropriate tRNA, PheRS is an...; Region:
+ PheRS_beta_core; cd00769"
+ /db_xref="CDD:238392"
+ misc_feature complement(order(1579041..1579043,1579137..1579139,
+ 1579167..1579169,1579173..1579175,1579179..1579181,
+ 1579194..1579196,1579224..1579226,1579266..1579268,
+ 1579299..1579310,1579362..1579370,1579374..1579376,
+ 1579380..1579382,1579392..1579394,1579401..1579403))
+ /gene="pheT"
+ /locus_tag="SARI_01631"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238392"
+ misc_feature complement(1579362..1579382)
+ /gene="pheT"
+ /locus_tag="SARI_01631"
+ /note="motif 1; other site"
+ /db_xref="CDD:238392"
+ misc_feature complement(1579239..1579250)
+ /gene="pheT"
+ /locus_tag="SARI_01631"
+ /note="motif 3; other site"
+ /db_xref="CDD:238392"
+ misc_feature complement(1579167..1579175)
+ /gene="pheT"
+ /locus_tag="SARI_01631"
+ /note="motif 2; other site"
+ /db_xref="CDD:238392"
+ misc_feature complement(1578519..1578800)
+ /gene="pheT"
+ /locus_tag="SARI_01631"
+ /note="Ferredoxin-fold anticodon binding domain; Region:
+ FDX-ACB; pfam03147"
+ /db_xref="CDD:202554"
+ gene complement(1580916..1581911)
+ /gene="pheS"
+ /locus_tag="SARI_01632"
+ CDS complement(1580916..1581911)
+ /gene="pheS"
+ /locus_tag="SARI_01632"
+ /inference="protein motif:HMMPanther:IPR002319"
+ /inference="protein motif:HMMPfam:IPR002319"
+ /inference="protein motif:HMMPfam:IPR004188"
+ /inference="protein motif:HMMTigr:IPR004529"
+ /inference="protein motif:superfamily:IPR010978"
+ /inference="similar to AA sequence:INSD:AAV77439.1"
+ /note="'catalyzes a two-step reaction, first charging a
+ phenylalanine molecule by linking its carboxyl group to
+ the alpha-phosphate of ATP, followed by transfer of the
+ aminoacyl-adenylate to its tRNA; forms a heterotetramer of
+ alpha(2)beta(2); binds two magnesium ions per tetramer;
+ type 1 subfamily'"
+ /codon_start=1
+ /transl_table=11
+ /product="phenylalanyl-tRNA synthetase subunit alpha"
+ /protein_id="YP_001570666.1"
+ /db_xref="GI:161503554"
+ /db_xref="InterPro:IPR002319"
+ /db_xref="InterPro:IPR004188"
+ /db_xref="InterPro:IPR004529"
+ /db_xref="InterPro:IPR010978"
+ /translation="MRKTMSHLAELVANAAAAINQASDVAALDNVRVEYLGKKGHLTL
+ QMTTLRDLPPEERPAAGAVINAAKEQVQQALNARKAELESAALNARLAAETIDISLPG
+ RRIENGGLHPVTRTIDRIESFFGELGFTVATGPEIEDDYHNFDALNIPGHHPARADHD
+ TFWFDATRLLRTQTSGVQIRTMKAQQPPIRIIAPGRVYRNDYDQTHTPMFHQMEGLIV
+ DTNISFTNLKGTLHDFLRNFFEEDLQIRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGC
+ GMVHPNVLRNVGIDPEIYSGFAFGMGMERLTMLRYGVTDLRSFFENDLRFLKQFK"
+ misc_feature complement(1580922..1581830)
+ /gene="pheS"
+ /locus_tag="SARI_01632"
+ /note="phenylalanyl-tRNA synthetase subunit alpha;
+ Validated; Region: pheS; PRK00488"
+ /db_xref="CDD:234780"
+ misc_feature complement(1581636..1581830)
+ /gene="pheS"
+ /locus_tag="SARI_01632"
+ /note="Aminoacyl tRNA synthetase class II, N-terminal
+ domain; Region: Phe_tRNA-synt_N; pfam02912"
+ /db_xref="CDD:111764"
+ misc_feature complement(1580937..1581581)
+ /gene="pheS"
+ /locus_tag="SARI_01632"
+ /note="Phenylalanyl-tRNA synthetase (PheRS) alpha chain
+ catalytic core domain. PheRS belongs to class II
+ aminoacyl-tRNA synthetases (aaRS) based upon its structure
+ and the presence of three characteristic sequence motifs.
+ This domain is primarily responsible...; Region:
+ PheRS_alpha_core; cd00496"
+ /db_xref="CDD:238277"
+ misc_feature complement(order(1580940..1580948,1580952..1580954,
+ 1581069..1581074,1581132..1581134,1581138..1581146,
+ 1581165..1581167,1581225..1581230,1581234..1581242,
+ 1581291..1581293,1581312..1581314,1581318..1581320,
+ 1581324..1581326,1581330..1581332,1581342..1581350,
+ 1581369..1581371,1581417..1581431,1581441..1581443,
+ 1581456..1581458,1581507..1581515,1581519..1581524,
+ 1581537..1581539,1581558..1581563,1581570..1581572,
+ 1581579..1581581))
+ /gene="pheS"
+ /locus_tag="SARI_01632"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238277"
+ misc_feature complement(1581507..1581527)
+ /gene="pheS"
+ /locus_tag="SARI_01632"
+ /note="motif 1; other site"
+ /db_xref="CDD:238277"
+ misc_feature complement(order(1580964..1580966,1580997..1580999,
+ 1581006..1581017,1581081..1581098,1581147..1581152,
+ 1581156..1581158,1581270..1581272,1581276..1581278,
+ 1581282..1581284,1581291..1581299,1581309..1581311,
+ 1581315..1581317,1581378..1581380,1581387..1581389,
+ 1581393..1581395,1581435..1581443))
+ /gene="pheS"
+ /locus_tag="SARI_01632"
+ /note="active site"
+ /db_xref="CDD:238277"
+ misc_feature complement(1581309..1581320)
+ /gene="pheS"
+ /locus_tag="SARI_01632"
+ /note="motif 2; other site"
+ /db_xref="CDD:238277"
+ misc_feature complement(1580997..1581014)
+ /gene="pheS"
+ /locus_tag="SARI_01632"
+ /note="motif 3; other site"
+ /db_xref="CDD:238277"
+ gene complement(1582202..1582558)
+ /gene="rplT"
+ /locus_tag="SARI_01633"
+ CDS complement(1582202..1582558)
+ /gene="rplT"
+ /locus_tag="SARI_01633"
+ /inference="protein motif:BlastProDom:IPR005813"
+ /inference="protein motif:HMMPanther:IPR005813"
+ /inference="protein motif:HMMPfam:IPR005813"
+ /inference="protein motif:HMMTigr:IPR005812"
+ /inference="protein motif:ScanRegExp:IPR005812"
+ /inference="similar to AA sequence:INSD:AAZ88148.1"
+ /note="binds directly to 23S ribosomal RNA prior to in
+ vitro assembly of the 50S ribosomal subunit"
+ /codon_start=1
+ /transl_table=11
+ /product="50S ribosomal protein L20"
+ /protein_id="YP_001570667.1"
+ /db_xref="GI:161503555"
+ /db_xref="InterPro:IPR005812"
+ /db_xref="InterPro:IPR005813"
+ /translation="MARVKRGVIARARHKKILKQAKGYYGARSRVYRVAFQAVIKAGQ
+ YAYRDRRQRKRQFRQLWIARINAAARQNGISYSKFINGLKKASVEIDRKILADIAVFD
+ KVAFSALVEKAKAALA"
+ misc_feature complement(1582226..1582543)
+ /gene="rplT"
+ /locus_tag="SARI_01633"
+ /note="Ribosomal protein L20; Region: Ribosomal_L20;
+ cd07026"
+ /db_xref="CDD:197305"
+ misc_feature complement(order(1582277..1582285,1582307..1582309,
+ 1582316..1582321,1582328..1582333,1582349..1582351,
+ 1582361..1582363,1582370..1582378,1582382..1582426,
+ 1582433..1582438,1582448..1582453,1582460..1582471,
+ 1582475..1582498,1582511..1582522,1582526..1582543))
+ /gene="rplT"
+ /locus_tag="SARI_01633"
+ /note="23S rRNA binding site [nucleotide binding]; other
+ site"
+ /db_xref="CDD:197305"
+ misc_feature complement(order(1582232..1582237,1582253..1582258,
+ 1582274..1582276,1582283..1582294,1582409..1582411,
+ 1582418..1582423,1582427..1582432,1582439..1582441,
+ 1582451..1582453))
+ /gene="rplT"
+ /locus_tag="SARI_01633"
+ /note="L21 binding site [polypeptide binding]; other site"
+ /db_xref="CDD:197305"
+ misc_feature complement(order(1582259..1582261,1582268..1582270,
+ 1582277..1582279,1582349..1582351,1582355..1582360,
+ 1582367..1582369,1582376..1582381,1582388..1582390))
+ /gene="rplT"
+ /locus_tag="SARI_01633"
+ /note="L13 binding site [polypeptide binding]; other site"
+ /db_xref="CDD:197305"
+ gene complement(1582609..1582806)
+ /gene="rpmI"
+ /locus_tag="SARI_01635"
+ CDS complement(1582609..1582806)
+ /gene="rpmI"
+ /locus_tag="SARI_01635"
+ /inference="protein motif:BlastProDom:IPR001706"
+ /inference="protein motif:HMMPfam:IPR001706"
+ /inference="protein motif:HMMTigr:IPR001706"
+ /inference="protein motif:ScanRegExp:IPR001706"
+ /inference="similar to AA sequence:REFSEQ:YP_688993.1"
+ /note="'COG: COG0291 Ribosomal protein L35;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="50S ribosomal protein L35"
+ /protein_id="YP_001570668.1"
+ /db_xref="GI:161503557"
+ /db_xref="InterPro:IPR001706"
+ /translation="MPKIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHL
+ RPKAMVSKGDLGLVIACLPYA"
+ misc_feature complement(1582612..1582806)
+ /gene="rpmI"
+ /locus_tag="SARI_01635"
+ /note="50S ribosomal protein L35; Reviewed; Region: rpmI;
+ PRK00172"
+ /db_xref="CDD:234676"
+ gene 1582678..1582896
+ /locus_tag="SARI_01634"
+ CDS 1582678..1582896
+ /locus_tag="SARI_01634"
+ /inference="similar to AA sequence:REFSEQ:YP_852805.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570669.1"
+ /db_xref="GI:161503556"
+ /translation="MTFTFSRFFGQNVTQVSVLVLKTTFTGFFEALSSTAYGLNFWHF
+ NNFHFALLINETQANKTCEARKLHRIVT"
+ gene complement(1582902..1583336)
+ /gene="infC"
+ /locus_tag="SARI_01636"
+ CDS complement(1582902..1583336)
+ /gene="infC"
+ /locus_tag="SARI_01636"
+ /inference="protein motif:BlastProDom:IPR001288"
+ /inference="protein motif:Gene3D:IPR001288"
+ /inference="protein motif:HMMPanther:IPR001288"
+ /inference="protein motif:HMMPfam:IPR001288"
+ /inference="protein motif:HMMTigr:IPR001288"
+ /inference="protein motif:ScanRegExp:IPR001288"
+ /inference="similar to AA sequence:INSD:AAC36814.1"
+ /note="IF-3 has several functions that are required and
+ promote translation initiation including; preventing
+ association of 70S by binding to 30S; monitoring
+ codon-anticodon interactions by promoting disassociation
+ of fMet-tRNA(fMet) from initiation complexes formed on
+ leaderless mRNAs or incorrectly bound noninitiatior tRNAs
+ and complexes with noncanonical start sites; stimulates
+ codon-anticodon interactions at P-site; involved in moving
+ mRNA to the P-site; and in recycling subunits"
+ /codon_start=1
+ /transl_table=11
+ /product="translation initiation factor IF-3"
+ /protein_id="YP_001570670.1"
+ /db_xref="GI:161503558"
+ /db_xref="InterPro:IPR001288"
+ /translation="MSLREALEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKS
+ SKEQKKKQKVIQVKEIKFRPGTDEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQ
+ QIGMEVLNRVKDDLQELAVVESFPTKIEGRQMIMVLAPKKKQ"
+ misc_feature complement(1582908..1583336)
+ /gene="infC"
+ /locus_tag="SARI_01636"
+ /note="translation initiation factor IF-3; Reviewed;
+ Region: infC; PRK00028"
+ /db_xref="CDD:234582"
+ misc_feature complement(1583220..>1583336)
+ /gene="infC"
+ /locus_tag="SARI_01636"
+ /note="Translation initiation factor IF-3, N-terminal
+ domain; Region: IF3_N; pfam05198"
+ /db_xref="CDD:191228"
+ misc_feature complement(1582914..1583153)
+ /gene="infC"
+ /locus_tag="SARI_01636"
+ /note="Translation initiation factor IF-3, C-terminal
+ domain; Region: IF3_C; pfam00707"
+ /db_xref="CDD:201407"
+ gene complement(1583448..1585376)
+ /locus_tag="SARI_01637"
+ CDS complement(1583448..1585376)
+ /locus_tag="SARI_01637"
+ /inference="protein motif:Gene3D:IPR004154"
+ /inference="protein motif:Gene3D:IPR012675"
+ /inference="protein motif:HMMPfam:IPR002314"
+ /inference="protein motif:HMMPfam:IPR004095"
+ /inference="protein motif:HMMPfam:IPR004154"
+ /inference="protein motif:HMMPfam:IPR012947"
+ /inference="protein motif:HMMTigr:IPR002320"
+ /inference="protein motif:superfamily:IPR004154"
+ /inference="protein motif:superfamily:IPR012676"
+ /note="'catalyzes the formation of threonyl-tRNA(Thr) from
+ threonine and tRNA(Thr); catalyzes a two-step reaction,
+ first charging a threonine molecule by linking its
+ carboxyl group to the alpha-phosphate of ATP, followed by
+ transfer of the aminoacyl-adenylate to its tRNA'"
+ /codon_start=1
+ /transl_table=11
+ /product="threonyl-tRNA synthetase"
+ /protein_id="YP_001570671.2"
+ /db_xref="GI:448236233"
+ /db_xref="InterPro:IPR002314"
+ /db_xref="InterPro:IPR002320"
+ /db_xref="InterPro:IPR004095"
+ /db_xref="InterPro:IPR004154"
+ /db_xref="InterPro:IPR012675"
+ /db_xref="InterPro:IPR012676"
+ /db_xref="InterPro:IPR012947"
+ /translation="MPVITLPDGSQRHYDHPVSPMDVALDIGPGLAKATIAGRVNGEL
+ VDASDLIENDATLSIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVVDNGF
+ YYDVDLDRTLTQEDVEALEKRMHELAEKDYDVIKKKVSWHDARETFVKRGETYKVAIL
+ DENIAHDDKPGLYHHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRI
+ YGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRE
+ LEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNC
+ PGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQ
+ IRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPDKRIGSDEMWDRAEADLAVALEENNI
+ PFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPV
+ MIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVVMNITDSQSEYVNELTQKLQNAG
+ IRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNEV
+ IEKLQQEIRSRSLQQLEE"
+ misc_feature complement(1583463..1585376)
+ /locus_tag="SARI_01637"
+ /note="threonyl-tRNA synthetase; Reviewed; Region: thrS;
+ PRK00413"
+ /db_xref="CDD:234752"
+ misc_feature complement(1585191..1585367)
+ /locus_tag="SARI_01637"
+ /note="TGS _ThrRS_N: ThrRS (threonyl-tRNA Synthetase) is
+ a class II tRNA synthetase that couples threonine to its
+ cognate tRNA. In addition to its catalytic and
+ anticodon-binding domains, ThrRS has an N-terminal TGS
+ domain, named after the ThrRS, GTPase, and...; Region:
+ TGS_ThrRS_N; cd01667"
+ /db_xref="CDD:133437"
+ misc_feature complement(1584720..1584863)
+ /locus_tag="SARI_01637"
+ /note="Threonyl and Alanyl tRNA synthetase second
+ additional domain; Region: tRNA_SAD; pfam07973"
+ /db_xref="CDD:219676"
+ misc_feature complement(1583760..1584653)
+ /locus_tag="SARI_01637"
+ /note="Threonyl-tRNA synthetase (ThrRS) class II core
+ catalytic domain. ThrRS is a homodimer. It is responsible
+ for the attachment of threonine to the 3' OH group of
+ ribose of the appropriate tRNA. This domain is primarily
+ responsible for ATP-dependent...; Region: ThrRS_core;
+ cd00771"
+ /db_xref="CDD:238394"
+ misc_feature complement(order(1583817..1583819,1583826..1583831,
+ 1583925..1583927,1583937..1583942,1583949..1583951,
+ 1584234..1584236,1584240..1584242,1584249..1584257,
+ 1584270..1584278,1584282..1584284,1584288..1584290,
+ 1584384..1584386,1584426..1584431,1584438..1584440,
+ 1584450..1584452,1584603..1584605,1584642..1584644))
+ /locus_tag="SARI_01637"
+ /note="active site"
+ /db_xref="CDD:238394"
+ misc_feature complement(order(1583877..1583879,1583883..1583885,
+ 1584030..1584038,1584162..1584164,1584243..1584248,
+ 1584276..1584278,1584285..1584287,1584291..1584293,
+ 1584330..1584338,1584342..1584350,1584357..1584362,
+ 1584396..1584398,1584402..1584413,1584417..1584425,
+ 1584477..1584479,1584483..1584491,1584495..1584497,
+ 1584501..1584506,1584516..1584521,1584564..1584566,
+ 1584573..1584575,1584579..1584584,1584588..1584590,
+ 1584594..1584596,1584600..1584608,1584612..1584614,
+ 1584630..1584632))
+ /locus_tag="SARI_01637"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238394"
+ misc_feature complement(1584483..1584506)
+ /locus_tag="SARI_01637"
+ /note="motif 1; other site"
+ /db_xref="CDD:238394"
+ misc_feature complement(1584282..1584293)
+ /locus_tag="SARI_01637"
+ /note="motif 2; other site"
+ /db_xref="CDD:238394"
+ misc_feature complement(1583817..1583831)
+ /locus_tag="SARI_01637"
+ /note="motif 3; other site"
+ /db_xref="CDD:238394"
+ misc_feature complement(1583490..1583762)
+ /locus_tag="SARI_01637"
+ /note="ThrRS Threonyl-anticodon binding domain. ThrRS
+ belongs to class II aminoacyl-tRNA synthetases (aaRS).
+ This alignment contains the anticodon binding domain,
+ which is responsible for specificity in tRNA-binding, so
+ that the activated amino acid is...; Region:
+ ThrRS_anticodon; cd00860"
+ /db_xref="CDD:238437"
+ misc_feature complement(order(1583550..1583552,1583556..1583558,
+ 1583586..1583588,1583610..1583612,1583628..1583630,
+ 1583733..1583738))
+ /locus_tag="SARI_01637"
+ /note="anticodon binding site; other site"
+ /db_xref="CDD:238437"
+ gene complement(1585741..1587009)
+ /gene="umuC"
+ /locus_tag="SARI_01638"
+ CDS complement(1585741..1587009)
+ /gene="umuC"
+ /locus_tag="SARI_01638"
+ /inference="protein motif:HMMPfam:IPR001126"
+ /inference="similar to AA sequence:INSD:AAL20907.1"
+ /note="binds processed UmuD protein to form functional DNA
+ pol V (UmuD'2UmuC); involved in translesion
+ polymerization"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA polymerase V subunit UmuC"
+ /protein_id="YP_001570672.1"
+ /db_xref="GI:161503560"
+ /db_xref="InterPro:IPR001126"
+ /translation="MFALCDVNSFYASCETVFRPDLKGRPVVVLSNNDGCVIACSAEA
+ KQLGIAMGEPYFKQKELFRRSGVVCFSSNYELYADMSNRVMTMLEEMSPRVEIYSIDE
+ AFCDLTGVRNCRDLTDFGREIRATIQQRTRLTVGVGIAQTKTLAKLANHAAKRWQQST
+ GGVVDLSNVERQRKLMAVLPVSEVWGVGHRINKKLEVMGIRTVLDLADSDIRFIRKHF
+ NVVLERTVRELRGEPCLELEEFAPTKQEIVCSRSFGERVTSYEEMRQAICSYAARAAE
+ KLRGEHQYCRFISTFVKTSPFVLNEPCYGNSASVMLLTPTQDSRDIINAAVKCLDKIW
+ RDGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRAGSEKLMEVLDHLNAKDGKGTLYFA
+ GQGILRQWAMKREMLSPRYTTRYSDLLRVR"
+ misc_feature complement(1585744..1587009)
+ /gene="umuC"
+ /locus_tag="SARI_01638"
+ /note="DNA polymerase V subunit UmuC; Reviewed; Region:
+ umuC; PRK03609"
+ /db_xref="CDD:179607"
+ misc_feature complement(1585963..1587003)
+ /gene="umuC"
+ /locus_tag="SARI_01638"
+ /note="umuC subunit of DNA Polymerase V; Region:
+ PolY_Pol_V_umuC; cd01700"
+ /db_xref="CDD:176454"
+ misc_feature complement(order(1586548..1586550,1586704..1586709,
+ 1586875..1586877,1586884..1586886,1586977..1586982,
+ 1586989..1586994))
+ /gene="umuC"
+ /locus_tag="SARI_01638"
+ /note="active site"
+ /db_xref="CDD:176454"
+ misc_feature complement(order(1586101..1586103,1586107..1586112,
+ 1586116..1586124,1586179..1586181,1586260..1586277,
+ 1586350..1586352,1586437..1586457,1586704..1586706,
+ 1586713..1586715))
+ /gene="umuC"
+ /locus_tag="SARI_01638"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:176454"
+ misc_feature complement(1585747..1585971)
+ /gene="umuC"
+ /locus_tag="SARI_01638"
+ /note="Domain of unknown function (DUF4113); Region:
+ DUF4113; pfam13438"
+ /db_xref="CDD:222129"
+ gene complement(1587012..1587431)
+ /locus_tag="SARI_01639"
+ CDS complement(1587012..1587431)
+ /locus_tag="SARI_01639"
+ /inference="protein motif:FPrintScan:IPR006197"
+ /inference="protein motif:HMMPfam:IPR006198"
+ /inference="protein motif:superfamily:IPR011056"
+ /inference="similar to AA sequence:INSD:AAV76854.1"
+ /note="binds with UmuC protein to form functional DNA pol
+ V (UmuD'2UmuC); involved in translesion polymerization"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA polymerase V subunit UmuD"
+ /protein_id="YP_001570673.1"
+ /db_xref="GI:161503561"
+ /db_xref="InterPro:IPR006197"
+ /db_xref="InterPro:IPR006198"
+ /db_xref="InterPro:IPR011056"
+ /translation="MEFFRPTELPGIISLPFFSYLVPCGFPSPAADYVEQRIDLNELL
+ VSHPGSTYFVKATGDSMIEAGISDGDLLVVDSSRTAEHGDIVIAAVGGEFTVKRLQLR
+ PTVQLNPMNSAYSPIIIGSEDTLDVFGVVTFIVKVAS"
+ misc_feature complement(1587024..>1587431)
+ /locus_tag="SARI_01639"
+ /note="SOS-response transcriptional repressors
+ (RecA-mediated autopeptidases) [Transcription / Signal
+ transduction mechanisms]; Region: LexA; COG1974"
+ /db_xref="CDD:224885"
+ misc_feature complement(1587036..1587278)
+ /locus_tag="SARI_01639"
+ /note="Peptidase S24 LexA-like proteins are involved in
+ the SOS response leading to the repair of single-stranded
+ DNA within the bacterial cell. This family includes: the
+ lambda repressor CI/C2 family and related bacterial
+ prophage repressor proteins; LexA (EC...; Region:
+ S24_LexA-like; cd06529"
+ /db_xref="CDD:119397"
+ misc_feature complement(order(1587141..1587143,1587252..1587254))
+ /locus_tag="SARI_01639"
+ /note="Catalytic site [active]"
+ /db_xref="CDD:119397"
+ gene 1587658..1587813
+ /locus_tag="SARI_01640"
+ CDS 1587658..1587813
+ /locus_tag="SARI_01640"
+ /note="'COG: NOG21841 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570674.1"
+ /db_xref="GI:161503562"
+ /translation="MSTNEMTQAELAKINAEIAKLTAETSKLNRESAWYPIVIAIGLI
+ GAVAKLI"
+ gene 1587852..1588121
+ /locus_tag="SARI_01641"
+ CDS 1587852..1588121
+ /locus_tag="SARI_01641"
+ /inference="protein motif:superfamily:IPR010982"
+ /inference="similar to AA sequence:REFSEQ:ZP_00986339.1"
+ /note="'COG: NOG26807 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570675.1"
+ /db_xref="GI:161503563"
+ /db_xref="InterPro:IPR010982"
+ /translation="MRLIKDYTPPTPEDLNQLKEKLGYTGAQMADLAGVASNSQWRKY
+ TGGESPRAMSPHILFFMAAQLALDDKELASVLEKMQEIGASFENI"
+ misc_feature <1587855..>1587956
+ /locus_tag="SARI_01641"
+ /note="Carbamoyl-phosphate synthetase large chain,
+ oligomerisation domain; Region: CPSase_L_D3; pfam02787"
+ /db_xref="CDD:217231"
+ misc_feature <1587909..1588109
+ /locus_tag="SARI_01641"
+ /note="Phage antitermination protein Q; Region:
+ Phage_antiter_Q; pfam06323"
+ /db_xref="CDD:218989"
+ gene 1588194..1589336
+ /locus_tag="SARI_01642"
+ CDS 1588194..1589336
+ /locus_tag="SARI_01642"
+ /inference="protein motif:HMMPfam:IPR001296"
+ /inference="similar to AA sequence:INSD:AAC69662.1"
+ /note="'KEGG: spt:SPA3566 1.7e-113 waaK;
+ lipopolysaccharide 1,2-N-acetylglucosaminetransferase
+ K03280;
+ COG: COG0438 Glycosyltransferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570676.1"
+ /db_xref="GI:161503564"
+ /db_xref="InterPro:IPR001296"
+ /translation="MVDKIILTVTPIFSIPPRSAAAVETWMYQVAKRTKIPNRIVCIR
+ EEGYPDFTIVNERCSIHRIGFSRIYKRIFQKWTRLDPIPYSQRILNIAKDFNITDESV
+ IIVHNSMKLYRQIRQRAPHVKMIMHMHNAFEPEGLDKDVKMIVPSEFLKNYYRNHLPY
+ ADISIVPNGTDPYSLDKDLEKLKKSDLNIPSDKKVIFYAGRISPDKGVTLLLQAFEYL
+ LKERSDIELVVVGDYMNKSKGEKAAYQREVRELAERLKPHCHMLGGVAPEKIYSYYSL
+ ADLVVIPSQFQEPFCMVAIEAMGTGKPVLVSTRGGMTEFVKENETGYHLQEPMTPLTI
+ AQDIEKVLDAPDLSNIANNGRKYVLENYLWWHVTNKFEKVIEKWFD"
+ misc_feature 1588194..1589333
+ /locus_tag="SARI_01642"
+ /note="lipopolysaccharide
+ 1,2-N-acetylglucosaminetransferase; Provisional; Region:
+ PRK15484"
+ /db_xref="CDD:185381"
+ misc_feature 1588209..1589321
+ /locus_tag="SARI_01642"
+ /note="This family is most closely related to the GT1
+ family of glycosyltransferases and named after YqgM in
+ Bacillus licheniformis about which little is known.
+ Glycosyltransferases catalyze the transfer of sugar
+ moieties from activated donor molecules to...; Region:
+ GT1_YqgM_like; cd03801"
+ /db_xref="CDD:99974"
+ gene complement(1589533..1589709)
+ /locus_tag="SARI_01643"
+ CDS complement(1589533..1589709)
+ /locus_tag="SARI_01643"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:INSD:CAD33770.1"
+ /note="'COG: COG2801 Transposase and inactivated
+ derivatives;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570677.1"
+ /db_xref="GI:161503565"
+ /db_xref="InterPro:IPR012337"
+ /translation="MEHHDDQLYLAINDIDHTKIKAMSPQTNGIRERLHKTILNEFYQ
+ VAFRKKLYVDLDTL"
+ misc_feature complement(1589584..>1589691)
+ /locus_tag="SARI_01643"
+ /note="Integrase core domain; Region: rve; pfam00665"
+ /db_xref="CDD:216050"
+ gene complement(1589748..1589972)
+ /locus_tag="SARI_01644"
+ CDS complement(1589748..1589972)
+ /locus_tag="SARI_01644"
+ /inference="similar to AA sequence:INSD:AAG10024.1"
+ /note="'COG: COG2801 Transposase and inactivated
+ derivatives;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570678.1"
+ /db_xref="GI:161503566"
+ /translation="MMTKPVERLKPLIWVIWVHRTFCVGNLKGVGRIYQQIFVDTYSK
+ VVHCKLYITKALITKADLLNNRVLPFYGWC"
+ gene complement(1589854..1590291)
+ /locus_tag="SARI_01645"
+ CDS complement(1589854..1590291)
+ /locus_tag="SARI_01645"
+ /inference="similar to AA sequence:INSD:ABE10322.1"
+ /note="'COG: NOG14667 non supervised orthologous group;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570679.1"
+ /db_xref="GI:161503567"
+ /translation="MRCAMWGVDALINRRRCSPNFKNRTDESTERAVVDYAVAFPAHG
+ QHRTSNERRKQGIFIYGSGVRSIWLRHPPENFKKCLKALEEKVTSNGIELTDSQIAAL
+ ERKVSDDEACGEIETAHLGYLGSQDVLCGQPERRRTYLSADIC"
+ misc_feature complement(1590079..>1590291)
+ /locus_tag="SARI_01645"
+ /note="Winged helix-turn helix; Region: HTH_29; pfam13551"
+ /db_xref="CDD:222216"
+ gene complement(1590288..1591142)
+ /locus_tag="SARI_01646"
+ CDS complement(1590288..1591142)
+ /locus_tag="SARI_01646"
+ /inference="protein motif:HMMPfam:IPR001604"
+ /inference="protein motif:HMMSmart:IPR001604"
+ /inference="protein motif:ScanRegExp:IPR001604"
+ /inference="similar to AA sequence:INSD:AAX65257.1"
+ /note="'KEGG: pat:Patl_0573 7.7e-38 endonuclease;
+ COG: COG1864 DNA/RNA endonuclease G, NUC1;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA/RNA non-specific endonuclease"
+ /protein_id="YP_001570680.2"
+ /db_xref="GI:448236234"
+ /db_xref="InterPro:IPR001604"
+ /translation="MCKTINLLKLLPVILLSACTTSYHPQDTTSAPALPHREGLVQQP
+ DNCSVGCPQGGSHQTLYRYAYTLNNNSATKFANWVAYSVTKTSQASGRPRNWAQDPDL
+ PPSDTLAPSAYKNAHALLKVDRGHQAPLAGLGGISDWPSLNYLSNITPQKSALNQGAW
+ ASLENRVRELAKQADISVVHVVTGPLFERHIATLPEDATVEIPSGYWKVLFTGTAPSK
+ SEGNYAAFIMDQNTPRSANFCDYQVTVDAIEHKTKPVLTLWSALPEAVANEVKTTKGN
+ LAQKLGCR"
+ misc_feature complement(1590318..1591004)
+ /locus_tag="SARI_01646"
+ /note="DNA/RNA non-specific endonuclease; prokaryotic and
+ eukaryotic double- and single-stranded DNA and RNA
+ endonucleases also present in phosphodiesterases. They
+ exists as monomers and homodimers; Region: NUC; cd00091"
+ /db_xref="CDD:238043"
+ misc_feature complement(1590351..1590959)
+ /locus_tag="SARI_01646"
+ /note="DNA/RNA non-specific endonuclease; Region:
+ Endonuclease_NS; smart00892"
+ /db_xref="CDD:214889"
+ misc_feature complement(order(1590639..1590641,1590651..1590653,
+ 1590675..1590677,1590765..1590767,1590771..1590776))
+ /locus_tag="SARI_01646"
+ /note="active site"
+ /db_xref="CDD:238043"
+ misc_feature complement(order(1590639..1590641,1590771..1590776))
+ /locus_tag="SARI_01646"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:238043"
+ misc_feature complement(1590675..1590677)
+ /locus_tag="SARI_01646"
+ /note="Mg2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238043"
+ gene complement(1591332..1591463)
+ /locus_tag="SARI_01647"
+ CDS complement(1591332..1591463)
+ /locus_tag="SARI_01647"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570681.1"
+ /db_xref="GI:161503569"
+ /translation="MIRCLNVEKMALKNLRHSRYWVPIFSFIIRVRTIVGFMIMHII"
+ gene 1591647..1592549
+ /locus_tag="SARI_01648"
+ CDS 1591647..1592549
+ /locus_tag="SARI_01648"
+ /inference="similar to AA sequence:REFSEQ:NP_456183.1"
+ /note="'COG: COG3528 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570682.1"
+ /db_xref="GI:161503570"
+ /translation="MANASSLAISLANDDAGIFQPTLNTLYGHQAADRDDYSSGLFLG
+ YSHDINDASQLSFHIAQDIYSPSGANKRKPEAVKGDRAFSAFLHTGLEWNSLATNWLR
+ YRFGTDIGVIGPDAGGKEVQNRAHQIIGAEKYPAWQDQIENRYGYAAKGMVSLTPSVD
+ ILGINVGLYPEVSAVGGNLFQYFGYGATVALGNDKTFNSDNGFGLLARRGLMHSQKEG
+ LIYKVFAGVERREVDKNYTLQGKTLQTKMETVDINKTVDEYRVGATVGYSPVAFSLSL
+ NKVTPEFRTGGDYSYINGDITFFF"
+ misc_feature 1591695..1592546
+ /locus_tag="SARI_01648"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG3528"
+ /db_xref="CDD:226059"
+ gene complement(1592598..1593356)
+ /locus_tag="SARI_01649"
+ CDS complement(1592598..1593356)
+ /locus_tag="SARI_01649"
+ /inference="protein motif:HMMPfam:IPR007433"
+ /inference="protein motif:superfamily:IPR011049"
+ /inference="similar to AA sequence:REFSEQ:YP_216335.1"
+ /note="'COG: COG3137 Putative salt-induced outer membrane
+ protein;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570683.1"
+ /db_xref="GI:161503571"
+ /db_xref="InterPro:IPR007433"
+ /db_xref="InterPro:IPR011049"
+ /translation="MKLLKTVPAAVMLAGGVFASLHAAADDSVFTVMDDPSTAKKPFE
+ GNLNAGYLAQSGNTKSSSLTADTTMTWYGQRTAWSLWGNASNTSSNDERSSEKYAVGA
+ RNRFNITNYDYAFGQASWLTDRFNGYRQRDVLTTGYGRQFLNGPVHSFRFEFGPGVRY
+ DEHTDDTTETQPLGYASGSYAWQLTDNAKFTQGVSIFGAEDTTLNSETALNVAINEHF
+ GLKVGYNLTWNSQPPESAPEHTDRRTTVTLGYKM"
+ misc_feature complement(1592601..1593356)
+ /locus_tag="SARI_01649"
+ /note="Putative salt-induced outer membrane protein [Cell
+ envelope biogenesis, outer membrane]; Region: COG3137"
+ /db_xref="CDD:225679"
+ gene 1593644..1594576
+ /locus_tag="SARI_01650"
+ CDS 1593644..1594576
+ /locus_tag="SARI_01650"
+ /inference="protein motif:HMMPfam:IPR011611"
+ /inference="protein motif:ScanRegExp:IPR002173"
+ /inference="similar to AA sequence:INSD:AAX65253.1"
+ /note="'KEGG: stm:STM1326 3.8e-155 pfkB;
+ 6-phosphofructokinase II K00850;
+ COG: COG1105 Fructose-1-phosphate kinase and related
+ fructose-6-phosphate kinase (PfkB);
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="6-phosphofructokinase 2"
+ /protein_id="YP_001570684.1"
+ /db_xref="GI:161503572"
+ /db_xref="InterPro:IPR002173"
+ /db_xref="InterPro:IPR011611"
+ /translation="MVRIYTLTLAPSLDSATITPQIYPEGKLRCSAPVFEPGGGGINV
+ ARAIAHLGGAATAIFPAGGATGEHLVALLADENVPVSTVDTKDWTRQNLHVHVESSGE
+ QYRFVMPGATLDDDEFRQLEEQVLEIESGAILVISGSLPPGVKVEKLTQLISAAQKQG
+ IRCIIDSSGEALTAALALGDIELVKPNLKELGALVNRDLTQPDDVRKAALEVAQSGKA
+ RRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAEDASLEEMV
+ RFGVAAGSAATLNQGTRLCSRDDTQKIYAYLSAQ"
+ misc_feature 1593644..1594570
+ /locus_tag="SARI_01650"
+ /note="6-phosphofructokinase 2; Provisional; Region:
+ PRK10294"
+ /db_xref="CDD:182361"
+ misc_feature 1593650..1594519
+ /locus_tag="SARI_01650"
+ /note="1-phosphofructokinase (FruK), minor
+ 6-phosphofructokinase (pfkB) and related sugar kinases.
+ FruK plays an important role in the predominant pathway
+ for fructose utilisation.This group also contains
+ tagatose-6-phophate kinase, an enzyme of the tagatose...;
+ Region: FruK_PfkB_like; cd01164"
+ /db_xref="CDD:238570"
+ misc_feature order(1593776..1593778,1593788..1593790,1593806..1593808,
+ 1593812..1593814,1594052..1594054)
+ /locus_tag="SARI_01650"
+ /note="putative substrate binding site [chemical binding];
+ other site"
+ /db_xref="CDD:238570"
+ misc_feature order(1594139..1594141,1594196..1594198,1594202..1594204,
+ 1594313..1594315,1594331..1594333,1594403..1594405,
+ 1594409..1594411)
+ /locus_tag="SARI_01650"
+ /note="putative ATP binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:238570"
+ gene 1594673..1594963
+ /locus_tag="SARI_01651"
+ CDS 1594673..1594963
+ /locus_tag="SARI_01651"
+ /inference="similar to AA sequence:INSD:CAD02028.1"
+ /note="'COG: NOG12163 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570685.1"
+ /db_xref="GI:161503573"
+ /translation="MSSGDITRYVITVTFHEDSLTEFNELNNHLTRSGFLLTLTDDEG
+ SVHELGTNTFGFISAQSADEIKALVTGLAKSALDKDVDITVTTWEEWSKNAQ"
+ misc_feature 1594673..1594960
+ /locus_tag="SARI_01651"
+ /note="Protein of unknown function (DUF2622); Region:
+ DUF2622; pfam11080"
+ /db_xref="CDD:220971"
+ gene 1595070..1595930
+ /locus_tag="SARI_01652"
+ CDS 1595070..1595930
+ /locus_tag="SARI_01652"
+ /inference="protein motif:HMMPfam:IPR005581"
+ /inference="protein motif:superfamily:IPR011009"
+ /inference="similar to AA sequence:INSD:AAL20249.1"
+ /note="'KEGG: eci:UTI89_C1919 2.9e-148 yniA; hypothetical
+ protein YniA K00924;
+ COG: COG3001 Fructosamine-3-kinase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570686.1"
+ /db_xref="GI:161503574"
+ /db_xref="InterPro:IPR005581"
+ /db_xref="InterPro:IPR011009"
+ /translation="MWQAISRLLSEQVGEGEIELRNELPGGEVHAAWHLRYAGHDFFV
+ KCDEREMLRGFTAEADQLELLSRSKTVVVPKVWAVGSDRDYSFLVMDYLPPRPLDAHN
+ AFILGQQLAHLHEWSDQPQFGLDFDNALSTTPQPNAWQRRWSTFFAEQRIGWQLELAA
+ EKGITFGNIDAIVEHVQQRLASHQPQPSLLHGDLWSANCALGPDGPYIFDPACYWGDR
+ ECDLAMLPLHTGQPPQIYDGYQSVSPLSVDFLDRQPIYQLYTLLNRARLFGGQHLLMA
+ QKAMDRLLAA"
+ misc_feature 1595136..1595765
+ /locus_tag="SARI_01652"
+ /note="Phosphotransferase enzyme family; Region: APH;
+ pfam01636"
+ /db_xref="CDD:216618"
+ misc_feature 1595136..>1595423
+ /locus_tag="SARI_01652"
+ /note="Aminoglycoside 3'-phosphotransferase (APH) and
+ Choline Kinase (ChoK) family. The APH/ChoK family is part
+ of a larger superfamily that includes the catalytic
+ domains of other kinases, such as the typical
+ serine/threonine/tyrosine protein kinases (PKs)...;
+ Region: APH_ChoK_like; cd05120"
+ /db_xref="CDD:240159"
+ misc_feature order(1595151..1595153,1595163..1595165,1595196..1595198,
+ 1595202..1595204,1595289..1595291,1595337..1595348)
+ /locus_tag="SARI_01652"
+ /note="active site"
+ /db_xref="CDD:240159"
+ misc_feature order(1595163..1595165,1595196..1595198,1595202..1595204,
+ 1595289..1595291,1595337..1595348)
+ /locus_tag="SARI_01652"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:240159"
+ misc_feature <1595577..1595744
+ /locus_tag="SARI_01652"
+ /note="Aminoglycoside 3'-phosphotransferase (APH) and
+ Choline Kinase (ChoK) family. The APH/ChoK family is part
+ of a larger superfamily that includes the catalytic
+ domains of other kinases, such as the typical
+ serine/threonine/tyrosine protein kinases (PKs)...;
+ Region: APH_ChoK_like; cl17270"
+ /db_xref="CDD:247824"
+ gene complement(1595981..1596517)
+ /locus_tag="SARI_01653"
+ CDS complement(1595981..1596517)
+ /locus_tag="SARI_01653"
+ /inference="similar to AA sequence:INSD:AAX65250.1"
+ /note="'COG: NOG07880 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570687.1"
+ /db_xref="GI:161503575"
+ /translation="MTYQQAGRIAILKRVVGWVIFIPALLSTLISVLKFMYAHSEKQE
+ GINAVMLDFTHVMIDMMRVNTPFLNVFWYNSPTPNFQGSLNIGFWLIFILIFVGLAMQ
+ DSGARMSRQSRFLREGVEDQLILEKAKGAEGLTREQIESRIVVPHHTIFLQFFSLYIL
+ PVIIIVLGYFFFTLLGFM"
+ misc_feature complement(1595987..1596475)
+ /locus_tag="SARI_01653"
+ /note="YniB-like protein; Region: YniB; pfam14002"
+ /db_xref="CDD:206172"
+ gene 1596665..1597333
+ /locus_tag="SARI_01654"
+ CDS 1596665..1597333
+ /locus_tag="SARI_01654"
+ /inference="protein motif:HMMPfam:IPR005834"
+ /inference="protein motif:HMMTigr:IPR006402"
+ /inference="similar to AA sequence:REFSEQ:YP_216330.1"
+ /note="'YniC; catalyzes the dephosphorylation of
+ 2-deoxyglucose 6-phosphate, mannose 6-phosphate and
+ p-nitrophenyl phosphate'"
+ /codon_start=1
+ /transl_table=11
+ /product="2-deoxyglucose-6-phosphatase"
+ /protein_id="YP_001570688.1"
+ /db_xref="GI:161503576"
+ /db_xref="InterPro:IPR005834"
+ /db_xref="InterPro:IPR006402"
+ /translation="MSTPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDITRRH
+ ELPDTLGLRIDMVVDLWFAQQPWSGPDRQEVTNRVIARAITLIEETRPLLPGVHEAVA
+ LCKAQGLFVGLASASPLHMLEKVLTMFELRDSFDALASAEKLPYSKPHPQVYLDCAAK
+ LGVDPLTCVALEDSVNGLIAAKAARMRAIVVPAEENQRDPRFALANVKLSSLRGLTAA
+ HLLG"
+ misc_feature 1596665..1597330
+ /locus_tag="SARI_01654"
+ /note="2-deoxyglucose-6-phosphatase; Provisional; Region:
+ PRK10826"
+ /db_xref="CDD:236770"
+ misc_feature 1596911..1597237
+ /locus_tag="SARI_01654"
+ /note="Haloacid dehalogenase-like hydrolases. The haloacid
+ dehalogenase-like (HAD) superfamily includes L-2-haloacid
+ dehalogenase, epoxide hydrolase, phosphoserine
+ phosphatase, phosphomannomutase, phosphoglycolate
+ phosphatase, P-type ATPase, and many others; Region:
+ HAD_like; cd01427"
+ /db_xref="CDD:119389"
+ misc_feature 1597007..1597009
+ /locus_tag="SARI_01654"
+ /note="motif II; other site"
+ /db_xref="CDD:119389"
+ gene 1597471..1598070
+ /locus_tag="SARI_01655"
+ CDS 1597471..1598070
+ /locus_tag="SARI_01655"
+ /inference="protein motif:HMMPfam:IPR007404"
+ /inference="similar to AA sequence:REFSEQ:YP_216329.1"
+ /note="'COG: COG1988 Predicted membrane-bound
+ metal-dependent hydrolases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570689.1"
+ /db_xref="GI:161503577"
+ /db_xref="InterPro:IPR007404"
+ /translation="MGFIMTAEGHLLFSIASAVFAKNAGLTPVLAQGDWWHIIPSAIL
+ TCLLPDIDHPKSFLGQRLKWVSKPIARAFGHRGFTHSLLAVFALLATFYLKVPDTWII
+ PADALQGMVLGYLSHIVADMLTPAGVPLLWPCRWRFRLPILAPRKGNQLERFLCMALF
+ AWAVWMPQSIPENSAIRWSSHMINILQMQFNRFINHQID"
+ misc_feature 1597483..1598067
+ /locus_tag="SARI_01655"
+ /note="inner membrane protein; Provisional; Region:
+ PRK11648"
+ /db_xref="CDD:183256"
+ gene 1598207..1599598
+ /locus_tag="SARI_01656"
+ CDS 1598207..1599598
+ /locus_tag="SARI_01656"
+ /inference="protein motif:FPrintScan:IPR001991"
+ /inference="protein motif:HMMPfam:IPR001991"
+ /inference="similar to AA sequence:INSD:AAL20245.1"
+ /note="'KEGG: eci:UTI89_C4668 1.7e-35 gltP;
+ glutamate-aspartate symport protein K03309;
+ COG: COG1823 Predicted Na+/dicarboxylate symporter;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570690.1"
+ /db_xref="GI:161503578"
+ /db_xref="InterPro:IPR001991"
+ /translation="MNFPLIANIAVFVILLFVLAQARHKQWSLAKKVLIGLVMGVIFG
+ LALHTIYGADSQVLKDSIQWFNIVGNGYVQLLQMIVMPLVFASILSAVARLHNASQLG
+ KISFLTIGTLLFTTLIAALVGVLVTNLFGLTAEGLVQGGAETARLNAIETNYVGKVAD
+ LSVPQLVLSFVPKNPFADLTGANPTSIISVVIFAAFLGVAALKLLKDDAPKGERVLIA
+ IDTLQSWVMKLVRLVMQLTPYGVLALMTKVVAGSNLQDIIKLGSFVVASYLGLAIMFV
+ VHGILLGANGISPLKYFRKVWPVLTFAFTSRSSAASIPLNVEAQTRRLGVPESIASFA
+ ASFGATIGQNGCAGLYPAMLAVMVAPTVGINPLDPVWIATLAGIVTVSSAGVAGVGGG
+ ATFAALIVLPAMGLPVTLVALLISVEPLIDMGRTALNVSGSMTAGTLTSQWLKQTDKT
+ ILDSEEDGELAHR"
+ misc_feature 1598207..1599577
+ /locus_tag="SARI_01656"
+ /note="Predicted Na+/dicarboxylate symporter [General
+ function prediction only]; Region: COG1823"
+ /db_xref="CDD:224736"
+ misc_feature 1598273..1599589
+ /locus_tag="SARI_01656"
+ /note="Na+/H+-dicarboxylate symporters [Energy production
+ and conversion]; Region: GltP; COG1301"
+ /db_xref="CDD:224220"
+ gene complement(1599705..1599947)
+ /locus_tag="SARI_01657"
+ CDS complement(1599705..1599947)
+ /locus_tag="SARI_01657"
+ /inference="similar to AA sequence:INSD:AAX65246.1"
+ /note="'COG: NOG11329 non supervised orthologous group;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="cell division modulator"
+ /protein_id="YP_001570691.1"
+ /db_xref="GI:161503579"
+ /translation="MMKPLRQQNRQIISYIPRVEPAPPEHAIKMDAFRDVWILRGKYV
+ AFVLMGESFQRSPAFSVPESAQRWANQVRQENEIAD"
+ misc_feature complement(1599708..1599947)
+ /locus_tag="SARI_01657"
+ /note="cell division modulator; Provisional; Region:
+ PRK10113"
+ /db_xref="CDD:182246"
+ gene complement(1599995..1600132)
+ /locus_tag="SARI_01658"
+ CDS complement(1599995..1600132)
+ /locus_tag="SARI_01658"
+ /note="'Psort location: cytoskeletal, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570692.1"
+ /db_xref="GI:161503580"
+ /translation="MGVVVVKITLTIEYFSNYAMGERNVGKGATGKSHAQSRTLRGKI
+ G"
+ gene 1600341..1601574
+ /locus_tag="SARI_01659"
+ /note="Pseudogene compared to gi|16764669|ref|NP_460284.1|
+ hydroperoxidase HPII [Salmonella typhimurium LT2]"
+ gene complement(1601829..1602587)
+ /locus_tag="SARI_01661"
+ CDS complement(1601829..1602587)
+ /locus_tag="SARI_01661"
+ /inference="protein motif:HMMPfam:IPR006879"
+ /inference="similar to AA sequence:REFSEQ:YP_150772.1"
+ /note="'KEGG: eci:UTI89_C1926 3.5e-106 ydjC; hypothetical
+ protein YdjC K03478;
+ COG: COG3394 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570694.1"
+ /db_xref="GI:161503582"
+ /db_xref="InterPro:IPR006879"
+ /translation="MKRVLIVNADDFGLSKGQNYGIVEAYRNGVVTSTTALVNGEAID
+ HAAQLSHGLPALGVGMHFVLTLGKPVSEMPGLTRDGLLGKWIWQMAEEDTLPLDEIAY
+ ELACQYQRFIELFGREPTHLDSHHHVHMFPQIFPIAARFAAQRGIALRIDRQTVFNAG
+ NLPSNLRSTQGFSSEFYGEEISEARFLHILDTSAHRGEGSLEVMCHPAFVDNIIRQSA
+ YCYPRLTELDVLTSASLKAAIAERGYRPGSFLDI"
+ misc_feature complement(1601880..1602575)
+ /locus_tag="SARI_01661"
+ /note="Enterococcus faecalis EF3048 and similar proteins;
+ Region: YdjC_EF3048_like; cd10803"
+ /db_xref="CDD:212114"
+ misc_feature complement(order(1601919..1601921,1601970..1601972,
+ 1602213..1602215,1602219..1602221,1602225..1602227,
+ 1602405..1602407,1602411..1602413,1602549..1602551,
+ 1602555..1602560))
+ /locus_tag="SARI_01661"
+ /note="putative active site [active]"
+ /db_xref="CDD:212114"
+ misc_feature complement(order(1601919..1601921,1601970..1601972,
+ 1602213..1602230,1602405..1602413,1602549..1602560))
+ /locus_tag="SARI_01661"
+ /note="YdjC motif; other site"
+ /db_xref="CDD:212114"
+ misc_feature complement(order(1602213..1602215,1602405..1602407,
+ 1602555..1602560))
+ /locus_tag="SARI_01661"
+ /note="Mg binding site [ion binding]; other site"
+ /db_xref="CDD:212114"
+ misc_feature complement(order(1602249..1602251,1602258..1602260,
+ 1602282..1602284,1602345..1602347,1602351..1602356,
+ 1602453..1602467,1602474..1602476,1602540..1602542))
+ /locus_tag="SARI_01661"
+ /note="putative homodimer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:212114"
+ gene complement(1602600..1603955)
+ /locus_tag="SARI_01662"
+ CDS complement(1602600..1603955)
+ /locus_tag="SARI_01662"
+ /inference="protein motif:BlastProDom:IPR001088"
+ /inference="protein motif:HMMPfam:IPR001088"
+ /inference="protein motif:ScanRegExp:IPR001088"
+ /inference="similar to AA sequence:INSD:AAX65243.1"
+ /note="'KEGG: sec:SC1337 3.5e-239 celF;
+ phospho-beta-glucosidase (cellobiose-6-phosphate
+ hydrolase) K01222;
+ COG: COG1486
+ Alpha-galactosidases/6-phospho-beta-glucosidases, family 4
+ of glycosyl hydrolases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570695.1"
+ /db_xref="GI:161503583"
+ /db_xref="InterPro:IPR001088"
+ /translation="MSQKLKVVTIGGGSSYTPELLEGFIKRYHELPVTELWLVDVEDG
+ KEKLDIIFDLCQRMIDKAGVPLKLYKTLDRREALKDANFVTTQLRVGQLKARELDERI
+ PLSHGYLGQETNGAGGLFKGLRTIPVIFGIIKDVEELCPNAWVINFTNPAGMVTEAVY
+ RHTNFKKFIGVCNIPVGMKMFIHDVLALNENDDLSIDLFGLNHMVFIKDVLVNGTSRF
+ AELLDGVASGQLKASTVKNIFDLPFSEGLIRSLNMLPCSYLLYYFKQKEMLAIEMGEY
+ YKGGARAQVVQKVEKQLFDLYKNPELNVKPKELEQRGGAYYSDAACEVINAIYNDKQT
+ EHYVNIPHHGHVENIPADWAVEMTCTLGRNGARPHPRITRFDEKVLGLIHTIKGFEVA
+ ASNAALSGNFNDVLLALNLSPLVHSDRDAEVLARELILAHEKWLPNFATCIDALKGKQ
+ H"
+ misc_feature complement(1602630..1603949)
+ /locus_tag="SARI_01662"
+ /note="Alpha-galactosidases/6-phospho-beta-glucosidases,
+ family 4 of glycosyl hydrolases [Carbohydrate transport
+ and metabolism]; Region: CelF; COG1486"
+ /db_xref="CDD:224403"
+ misc_feature complement(1602648..1603943)
+ /locus_tag="SARI_01662"
+ /note="Glycoside Hydrolases Family 4;
+ Phospho-beta-glucosidase; Region: GH4_P_beta_glucosidase;
+ cd05296"
+ /db_xref="CDD:133432"
+ misc_feature complement(order(1603005..1603007,1603020..1603022,
+ 1603086..1603088,1603506..1603508,1603512..1603514,
+ 1603560..1603562,1603620..1603622,1603689..1603697,
+ 1603815..1603817,1603833..1603838,1603908..1603910,
+ 1603914..1603919))
+ /locus_tag="SARI_01662"
+ /note="NAD binding site [chemical binding]; other site"
+ /db_xref="CDD:133432"
+ misc_feature complement(order(1603005..1603007,1603017..1603022,
+ 1603110..1603112,1603182..1603184,1603347..1603349,
+ 1603437..1603439,1603506..1603508,1603620..1603622,
+ 1603668..1603670))
+ /locus_tag="SARI_01662"
+ /note="sugar binding site [chemical binding]; other site"
+ /db_xref="CDD:133432"
+ misc_feature complement(order(1603347..1603349,1603440..1603442))
+ /locus_tag="SARI_01662"
+ /note="divalent metal binding site [ion binding]; other
+ site"
+ /db_xref="CDD:133432"
+ misc_feature complement(order(1602846..1602857,1602861..1602863,
+ 1602867..1602872,1602927..1602929,1602963..1602965,
+ 1603314..1603316,1603323..1603325,1603371..1603373,
+ 1603380..1603382))
+ /locus_tag="SARI_01662"
+ /note="tetramer (dimer of dimers) interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:133432"
+ misc_feature complement(order(1602690..1602692,1602696..1602698,
+ 1602702..1602707,1602735..1602740,1602747..1602749,
+ 1602771..1602773,1602792..1602794,1602804..1602806,
+ 1602825..1602830,1603158..1603163,1603167..1603169,
+ 1603203..1603211,1603218..1603220,1603224..1603226))
+ /locus_tag="SARI_01662"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:133432"
+ gene complement(1604080..1604922)
+ /locus_tag="SARI_01663"
+ CDS complement(1604080..1604922)
+ /locus_tag="SARI_01663"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR000005"
+ /inference="protein motif:HMMPfam:IPR013096"
+ /inference="protein motif:HMMSmart:IPR000005"
+ /inference="protein motif:ScanRegExp:IPR000005"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="protein motif:superfamily:IPR011051"
+ /inference="similar to AA sequence:REFSEQ:NP_805001.1"
+ /note="represses the celABCDF-ydjC operon involved in
+ carbon uptake"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional regulator ChbR"
+ /protein_id="YP_001570696.1"
+ /db_xref="GI:161503584"
+ /db_xref="InterPro:IPR000005"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR011051"
+ /db_xref="InterPro:IPR012287"
+ /db_xref="InterPro:IPR013096"
+ /translation="MMQLQVNATEIKTVYEQQLFNGKNFHVFIYNKTESVTGLHQHDY
+ YEFTLVLTGRYYQEINGKRVLLERGDFVFIPVGSNHQSFYEFGATRILNVGISKRFFE
+ QHYLPLLPFCFVASQVYRVNSTFLTYIETVIASLNFRGNGLDEFIEVVTFYIINRLRH
+ YREEQVYDDIPQWLKATVEIMHDKSQFGENALENMVRLSAKSQEYLTRATRRYYSKTP
+ MQIINEIRINFAKKQLEMTNYSVTDIAYEAGYSSPSLFIKTFKKMTSFTPNSYRKRLT
+ EINE"
+ misc_feature complement(1604086..1604919)
+ /locus_tag="SARI_01663"
+ /note="DNA-binding transcriptional regulator ChbR;
+ Provisional; Region: PRK10296"
+ /db_xref="CDD:182362"
+ misc_feature complement(<1604680..1604817)
+ /locus_tag="SARI_01663"
+ /note="Cupin domain; Region: Cupin_2; pfam07883"
+ /db_xref="CDD:219618"
+ misc_feature complement(1604104..1604229)
+ /locus_tag="SARI_01663"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ gene complement(1604933..1605280)
+ /locus_tag="SARI_01664"
+ CDS complement(1604933..1605280)
+ /locus_tag="SARI_01664"
+ /inference="protein motif:BlastProDom:IPR003188"
+ /inference="protein motif:Gene3D:IPR003188"
+ /inference="protein motif:HMMPfam:IPR003188"
+ /inference="protein motif:HMMPIR:IPR003188"
+ /inference="protein motif:superfamily:IPR003188"
+ /inference="similar to AA sequence:INSD:AAV77463.1"
+ /note="'catalyzes the phosphorylation of incoming sugar
+ substrates concomitant with their translocation across the
+ cell membrane; involved N,N'-diacetylchitobiose transport;
+ protein IIA transfers a phosphoryl group to IIB which then
+ transfers the phosphoryl group to the sugar; IIC forms the
+ translocation channel for the sugar uptake'"
+ /codon_start=1
+ /transl_table=11
+ /product="PTS system N,N'-diacetylchitobiose-specific
+ transporter subunit IIA"
+ /protein_id="YP_001570697.1"
+ /db_xref="GI:161503585"
+ /db_xref="InterPro:IPR003188"
+ /translation="MFDLENVVDSQTAAEELEEVVMGLIINSGQARSLAYGALRKAKE
+ GDFEAAKAMMDQSRMALNEAHLVQTKLIEGDQGEGKMKVSLVLVHAQDHLMTSMLARE
+ LIAELIELHEKLK"
+ misc_feature complement(1604987..1605232)
+ /locus_tag="SARI_01664"
+ /note="PTS_IIA, PTS system, lactose/cellobiose specific
+ IIA subunit. The bacterial phosphoenolpyruvate: sugar
+ phosphotransferase system (PTS) is a multi-protein system
+ involved in the regulation of a variety of metabolic and
+ transcriptional processes. This...; Region: PTS_IIA_lac;
+ cd00215"
+ /db_xref="CDD:238133"
+ misc_feature complement(order(1604996..1604998,1605017..1605022,
+ 1605068..1605070,1605230..1605232))
+ /locus_tag="SARI_01664"
+ /note="methionine cluster; other site"
+ /db_xref="CDD:238133"
+ misc_feature complement(order(1605002..1605010,1605014..1605016,
+ 1605185..1605187))
+ /locus_tag="SARI_01664"
+ /note="active site"
+ /db_xref="CDD:238133"
+ misc_feature complement(1605014..1605016)
+ /locus_tag="SARI_01664"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238133"
+ misc_feature complement(1605005..1605007)
+ /locus_tag="SARI_01664"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:238133"
+ gene complement(1605331..1606689)
+ /locus_tag="SARI_01665"
+ CDS complement(1605331..1606689)
+ /locus_tag="SARI_01665"
+ /inference="protein motif:HMMPfam:IPR003352"
+ /inference="protein motif:HMMTigr:IPR004501"
+ /inference="protein motif:HMMTigr:IPR004796"
+ /inference="protein motif:superfamily:IPR008979"
+ /inference="similar to AA sequence:INSD:CAD02041.1"
+ /note="'catalyzes the phosphorylation of incoming sugar
+ substrates concomitant with their translocation across the
+ cell membrane; involved in N,N'-diacetylchitobiose
+ transport; protein IIA transfers a phosphoryl group to IIB
+ which then transfers the phosphoryl group to the sugar;
+ IIC forms the translocation channel for the sugar uptake'"
+ /codon_start=1
+ /transl_table=11
+ /product="PTS system N,N'-diacetylchitobiose-specific
+ transporter subunit IIC"
+ /protein_id="YP_001570698.1"
+ /db_xref="GI:161503586"
+ /db_xref="InterPro:IPR003352"
+ /db_xref="InterPro:IPR004501"
+ /db_xref="InterPro:IPR004796"
+ /db_xref="InterPro:IPR008979"
+ /translation="MSNVIASLEKVLLPFAVKIGKQPHVNAIKNGFIRLMPLTLAGAM
+ FVLINNVFLSFGEGAFFYSMGIRLDASIIETLNGLKGIGGNVYNGTLGIMSLMAPFFI
+ GMALAEERKVDALAAGLLSVAAFMTVTPYSVGEAYAVGANWLGGANIISGIIIGLVVA
+ EMFTFVVRRNWVIKLPDSVPASVSRSFSALIPGFIILSIMGIISWVLSNYGSNFHQII
+ MDTISTPLASLGSVVGWAYVIFVPLLWFFGIHGSLALTALDSGIMTPWALENISIYQQ
+ FGSVDAALEAGKTFHVWAKPMLDSYIFLGGSGATLGLIIAIFLASRRADYRQVAKLAL
+ PSGVFQINEPILFGLPIIMNPVMFIPFILVQPILAAITLVAYYLGIIPPITNIAPWTM
+ PTGLGAFFNTNGSVAALLVALFNLGVATLIYLPFVVVANKAQNAIEQEESEEDIANAL
+ KF"
+ misc_feature complement(1605334..1606689)
+ /locus_tag="SARI_01665"
+ /note="PTS system N,N'-diacetylchitobiose-specific
+ transporter subunit IIC; Provisional; Region: PRK10297"
+ /db_xref="CDD:182363"
+ misc_feature complement(1605361..1606668)
+ /locus_tag="SARI_01665"
+ /note="cellobiose phosphotransferase system IIC component;
+ Reviewed; Region: celD; PRK09592"
+ /db_xref="CDD:181976"
+ gene complement(1606773..1607108)
+ /locus_tag="SARI_01666"
+ CDS complement(1606773..1607108)
+ /locus_tag="SARI_01666"
+ /inference="protein motif:HMMPfam:IPR003501"
+ /inference="protein motif:HMMTigr:IPR003501"
+ /inference="similar to AA sequence:REFSEQ:YP_150777.1"
+ /note="'catalyzes the phosphorylation of incoming sugar
+ substrates concomitant with their translocation across the
+ cell membrane; involved in N,N'-diacetylchitobiose
+ transport; protein IIA transfers a phosphoryl group to IIB
+ which then transfers the phosphoryl group to the sugar;
+ IIC forms the translocation channel for the sugar uptake'"
+ /codon_start=1
+ /transl_table=11
+ /product="PTS system N,N'-diacetylchitobiose-specific
+ transporter subunit IIB"
+ /protein_id="YP_001570699.1"
+ /db_xref="GI:161503587"
+ /db_xref="InterPro:IPR003501"
+ /translation="MRTVFMEKKHIYLFCSAGMSTSLLVSKMRAQAEKYEVPVIIEAF
+ PETLVGEKGPTADVVLLGPQIAYMLPEIQRLLSDKPVEVIDSMLYGKVDGLGVLKAAV
+ AAIKKAAAN"
+ misc_feature complement(1606815..1607081)
+ /locus_tag="SARI_01666"
+ /note="PTS_IIB_chitobiose_lichenan: subunit IIB of enzyme
+ II (EII) of the N,N-diacetylchitobiose-specific and
+ lichenan-specific phosphoenolpyruvate:carbohydrate
+ phosphotransferase system (PTS). In these systems, EII is
+ either a lichenan- or an N; Region:
+ PTS_IIB_chitobiose_lichenan; cd05564"
+ /db_xref="CDD:99906"
+ misc_feature complement(order(1606842..1606844,1606917..1606919,
+ 1607046..1607051,1607055..1607060,1607064..1607066))
+ /locus_tag="SARI_01666"
+ /note="active site"
+ /db_xref="CDD:99906"
+ misc_feature complement(1607046..1607066)
+ /locus_tag="SARI_01666"
+ /note="P-loop; other site"
+ /db_xref="CDD:99906"
+ misc_feature complement(1607064..1607066)
+ /locus_tag="SARI_01666"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:99906"
+ gene complement(1607395..1607736)
+ /locus_tag="SARI_01667"
+ CDS complement(1607395..1607736)
+ /locus_tag="SARI_01667"
+ /inference="protein motif:HMMPfam:IPR007450"
+ /inference="similar to AA sequence:REFSEQ:YP_150778.1"
+ /note="osmotically-inducible lipoprotein E; activator of
+ ntr-like gene protein"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional activator OsmE"
+ /protein_id="YP_001570700.1"
+ /db_xref="GI:161503588"
+ /db_xref="InterPro:IPR007450"
+ /translation="MNKNVAGILSAAAVMTMLAGCTAYDRTKDQFVEPVVKDVKKGMS
+ RAQVAQIAGKPSSEVSMIHARGTCQTYILGQRDGKAETYFVALDDTGHVINSGYQTCA
+ EYDTDPQAPKQ"
+ misc_feature complement(1607401..1607727)
+ /locus_tag="SARI_01667"
+ /note="DNA-binding transcriptional activator OsmE;
+ Provisional; Region: PRK11251"
+ /db_xref="CDD:183058"
+ gene 1607954..1608781
+ /gene="nadE"
+ /locus_tag="SARI_01668"
+ CDS 1607954..1608781
+ /gene="nadE"
+ /locus_tag="SARI_01668"
+ /inference="protein motif:HMMPfam:IPR003694"
+ /inference="protein motif:HMMTigr:IPR003694"
+ /inference="similar to AA sequence:REFSEQ:YP_216318.1"
+ /note="catalyzes the formation of nicotinamide adenine
+ dinucleotide (NAD) from nicotinic acid adenine
+ dinucleotide (NAAD) using either ammonia or glutamine as
+ the amide donor and ATP; ammonia-utilizing enzymes include
+ the ones from Bacillus and Escherichia coli while
+ glutamine-utilizing enzymes include the Mycobacterial one;
+ forms homodimers"
+ /codon_start=1
+ /transl_table=11
+ /product="NAD synthetase"
+ /protein_id="YP_001570701.1"
+ /db_xref="GI:161503589"
+ /db_xref="InterPro:IPR003694"
+ /translation="MTLQQEIIQALGAKSYINPEEEIRRSVDFLKAYLKTYPFLKSLV
+ LGISGGQDSTLAGKLSQMAISELREETDDDALQFIAVRLPYGVQADEQDCQDAIAFIK
+ PDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARERMKAQYSIAGMTHGVVVGT
+ DHAAEAITGFFTKYGDGGTDINPLHRLNKRQGKQLLAALGCPEHLYKKVPTADLEDDR
+ PSLPDEAALGVTYDNIDDYLEGKTLAPAIAKIIEGWYVKTEHKRRLPITVFDDFWKK"
+ misc_feature 1608002..1608778
+ /gene="nadE"
+ /locus_tag="SARI_01668"
+ /note="NAD synthase [Coenzyme metabolism]; Region: NadE;
+ COG0171"
+ /db_xref="CDD:223249"
+ misc_feature 1608002..1608739
+ /gene="nadE"
+ /locus_tag="SARI_01668"
+ /note="NAD+ synthase is a homodimer, which catalyzes the
+ final step in de novo nicotinamide adenine dinucleotide
+ (NAD+) biosynthesis, an amide transfer from either ammonia
+ or glutamine to nicotinic acid adenine dinucleotide
+ (NaAD). The conversion of NaAD to NAD...; Region:
+ NAD_synthase; cd00553"
+ /db_xref="CDD:238309"
+ misc_feature order(1608026..1608031,1608038..1608040,1608047..1608052,
+ 1608272..1608274,1608275..1608277,1608284..1608289,
+ 1608296..1608301,1608350..1608352,1608362..1608364,
+ 1608371..1608376,1608380..1608388,1608392..1608400,
+ 1608404..1608409,1608470..1608475,1608482..1608499,
+ 1608506..1608511,1608731..1608733,1608737..1608739)
+ /gene="nadE"
+ /locus_tag="SARI_01668"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238309"
+ misc_feature order(1608086..1608097,1608110..1608112,1608194..1608202,
+ 1608347..1608349,1608359..1608361,1608368..1608373,
+ 1608377..1608379,1608431..1608433,1608446..1608448,
+ 1608461..1608472,1608479..1608481,1608584..1608589,
+ 1608593..1608595,1608629..1608631,1608731..1608736)
+ /gene="nadE"
+ /locus_tag="SARI_01668"
+ /note="NAD binding pocket [chemical binding]; other site"
+ /db_xref="CDD:238309"
+ misc_feature order(1608089..1608097,1608107..1608112,1608197..1608202,
+ 1608377..1608379,1608431..1608433,1608518..1608520,
+ 1608581..1608586)
+ /gene="nadE"
+ /locus_tag="SARI_01668"
+ /note="ATP binding pocket [chemical binding]; other site"
+ /db_xref="CDD:238309"
+ misc_feature order(1608095..1608097,1608107..1608109,1608446..1608448,
+ 1608584..1608586)
+ /gene="nadE"
+ /locus_tag="SARI_01668"
+ /note="Mg binding site [ion binding]; other site"
+ /db_xref="CDD:238309"
+ misc_feature order(1608224..1608226,1608572..1608595,1608611..1608634)
+ /gene="nadE"
+ /locus_tag="SARI_01668"
+ /note="active-site loop [active]"
+ /db_xref="CDD:238309"
+ gene 1608875..1609783
+ /locus_tag="SARI_01669"
+ CDS 1608875..1609783
+ /locus_tag="SARI_01669"
+ /inference="protein motif:HMMPfam:IPR000305"
+ /inference="protein motif:HMMSmart:IPR000305"
+ /inference="similar to AA sequence:INSD:CAD02045.1"
+ /note="3' incision activity; acts with UvrC"
+ /codon_start=1
+ /transl_table=11
+ /product="nucleotide excision repair endonuclease"
+ /protein_id="YP_001570702.1"
+ /db_xref="GI:161503590"
+ /db_xref="InterPro:IPR000305"
+ /translation="MNNQLTESTVVRRQSAPRLEFEAAAIYEYPEHLRPFLSELPALP
+ GVYVFHSESDTLPLYIGKSVNIRSRVLSHLRTPDEAAMLRQSRRISWICTAGEMGALL
+ LEARLIKEQQPLFNKRLRRNRQLCSLQLSEQKIEVVSARSVDFSHEPNLFGLFANRRA
+ ALQSLQSLADEQKLCYGLLGLEPLNRGRACFRFALKRCAGACCGQESPQAHFLRLQAS
+ LERLRVVCWPWKGAIALKESRPQMTQFHIINNWLWLGAVSSLVEATTLVRTPAGFDQD
+ GYKILCKPLMSGQYEIIELNTDCRQS"
+ misc_feature 1608905..1609759
+ /locus_tag="SARI_01669"
+ /note="nucleotide excision repair endonuclease;
+ Provisional; Region: PRK10545"
+ /db_xref="CDD:182535"
+ misc_feature 1608992..1609225
+ /locus_tag="SARI_01669"
+ /note="Catalytic GIY-YIG domain of nucleotide excision
+ repair endonucleases UvrC, Cho, and similar proteins;
+ Region: GIY-YIG_UvrC_Cho; cd10434"
+ /db_xref="CDD:198381"
+ misc_feature order(1609007..1609015,1609049..1609057)
+ /locus_tag="SARI_01669"
+ /note="GIY-YIG motif/motif A; other site"
+ /db_xref="CDD:198381"
+ misc_feature order(1609013..1609015,1609049..1609051,1609055..1609060,
+ 1609079..1609081,1609091..1609093,1609184..1609186,
+ 1609220..1609222)
+ /locus_tag="SARI_01669"
+ /note="active site"
+ /db_xref="CDD:198381"
+ misc_feature order(1609049..1609051,1609079..1609081,1609184..1609186)
+ /locus_tag="SARI_01669"
+ /note="catalytic site [active]"
+ /db_xref="CDD:198381"
+ misc_feature order(1609049..1609051,1609079..1609081,1609184..1609186)
+ /locus_tag="SARI_01669"
+ /note="putative DNA binding site [nucleotide binding];
+ other site"
+ /db_xref="CDD:198381"
+ misc_feature 1609184..1609186
+ /locus_tag="SARI_01669"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:198381"
+ gene complement(1609858..1610343)
+ /locus_tag="SARI_01671"
+ CDS complement(1609858..1610343)
+ /locus_tag="SARI_01671"
+ /inference="protein motif:HMMPfam:IPR012899"
+ /inference="similar to AA sequence:INSD:AAV77469.1"
+ /note="periplasmic protein induced by stress response via
+ Cpx and BaeSR system; similar to CpxP"
+ /codon_start=1
+ /transl_table=11
+ /product="periplasmic protein"
+ /protein_id="YP_001570703.1"
+ /db_xref="GI:161503592"
+ /db_xref="InterPro:IPR012899"
+ /translation="MRKLTALFVASTLAMGAANLAHADETNTAAPADVKPMMQHKGKF
+ GPHHDMMFKNLNLTDAQKQQIRDIMKAQREQMKRPPLEERRAIHDIIASDTFDKAKAE
+ AQITKMEAQRKANMLAHMETQNKIYNILTPEQKKQYNANFEKRLTERPAQEGKMPAAA
+ E"
+ misc_feature complement(1609909..1610181)
+ /locus_tag="SARI_01671"
+ /note="CpxP component of the bacterial Cpx-two-component
+ system and related proteins; Region: CpxP_like; cd09916"
+ /db_xref="CDD:197366"
+ misc_feature complement(order(1609918..1609920,1609927..1609932,
+ 1609963..1609965,1609972..1609974,1609981..1609986,
+ 1609993..1609995,1610005..1610007,1610017..1610019,
+ 1610029..1610031,1610038..1610040,1610050..1610052,
+ 1610056..1610058,1610068..1610073,1610080..1610082,
+ 1610092..1610094))
+ /locus_tag="SARI_01671"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:197366"
+ gene 1609888..1610409
+ /locus_tag="SARI_01670"
+ CDS 1609888..1610409
+ /locus_tag="SARI_01670"
+ /inference="similar to AA sequence:INSD:EAY47041.1"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570704.1"
+ /db_xref="GI:161503591"
+ /translation="MRRAFCQTLLKISVILLFLFWRQNVINFILGFHMRQHIGFALRF
+ HFGNLRFCFGFIERIAGNNIMYGATLFQRRTFHLFALRFHNVANLLLLRIRQVQVFKH
+ HIVMRAKLTFMLHHWLHIRWRGGVGLIGMSQIRSPHRQGRGHKQSGQFTHIFILPFGY
+ FYGIFKTVPCSRD"
+ gene complement(1610678..1611646)
+ /locus_tag="SARI_01672"
+ CDS complement(1610678..1611646)
+ /locus_tag="SARI_01672"
+ /inference="protein motif:HMMPfam:IPR007036"
+ /inference="similar to AA sequence:REFSEQ:YP_216315.1"
+ /note="catalyzes the formation of succinate and glutamate
+ from N(2)-succinylglutamate in arginine catabolism"
+ /codon_start=1
+ /transl_table=11
+ /product="succinylglutamate desuccinylase"
+ /protein_id="YP_001570705.1"
+ /db_xref="GI:161503593"
+ /db_xref="InterPro:IPR007036"
+ /translation="MDNFLSLTLTGETPRVTQGKGADFRWRWLGHGLLELTPNAPVDR
+ ALILSAGIHGNETAPVEMLDKLLSALYIGSLSLTWRVLVVFGNPQALAAGKRYCNSDM
+ NRMFGRRWQSFAESDETRRARELELSLETFFSYEQARIRWHLDLHTAIRGSHHLRFGI
+ LPQRDRPWDTDFLAWLGAAGLEALVFHQAPGGTFTHFSTEHFGALSCTLELGKALPFG
+ QNDLAQFSVTSQALSALLSGLETSTSSSPPLRYRVVSQITRHSDNFALYMDAQTLNFT
+ AFTKGTLLAEEGDKRVTVTHDVEYVLFPNPAVACGLRAGLMLERLP"
+ misc_feature complement(1610681..1611646)
+ /locus_tag="SARI_01672"
+ /note="succinylglutamate desuccinylase; Provisional;
+ Region: PRK05324"
+ /db_xref="CDD:235408"
+ misc_feature complement(1610693..1611517)
+ /locus_tag="SARI_01672"
+ /note="Succinylglutamate desuccinylase / Aspartoacylase
+ family; Region: AstE_AspA; pfam04952"
+ /db_xref="CDD:218345"
+ misc_feature complement(order(1611017..1611019,1611167..1611169,
+ 1611203..1611208,1611335..1611340,1611359..1611361,
+ 1611479..1611481,1611488..1611490))
+ /locus_tag="SARI_01672"
+ /note="active site"
+ /db_xref="CDD:199839"
+ misc_feature complement(order(1611206..1611208,1611479..1611481,
+ 1611488..1611490))
+ /locus_tag="SARI_01672"
+ /note="Zn binding site [ion binding]; other site"
+ /db_xref="CDD:199839"
+ gene complement(1611639..1612982)
+ /locus_tag="SARI_01673"
+ CDS complement(1611639..1612982)
+ /locus_tag="SARI_01673"
+ /inference="protein motif:HMMPfam:IPR007079"
+ /inference="similar to AA sequence:REFSEQ:NP_456206.1"
+ /note="'catalyzes the hydrolysis of 2-N-succinylarginine
+ into 2-N-succinylornithine, ammonia and carbon dioxide in
+ arginine degradation'"
+ /codon_start=1
+ /transl_table=11
+ /product="succinylarginine dihydrolase"
+ /protein_id="YP_001570706.1"
+ /db_xref="GI:161503594"
+ /db_xref="InterPro:IPR007079"
+ /translation="MTAHEVNFDGLVGLTHHYAGLSFGNEASTRHRFQVSNPLLAVKQ
+ GLLKMKALADAGFPQAVIPPHERPFIPALRQLGFSGNDEQILDKVARQAPRWLSRVSS
+ ASPMWVANAATVCPSADALDGKVHLTVANLNNKFHRSLEAPVTEALLRTIFRDESRFS
+ LHSALPQVALLGDEGAANHNRLGGEYGLAGVQLFVYGREEGNEKRPARYPARQTREAS
+ EAVARLNQVNPQQVIFAQQNPEAIDQGVFHNDVIAVSNRQVLFCHEAAFARQERLINH
+ LRTRVDGFMAIEVPADEVSVSDAVATYLFNSQLLSRDDGSMLLVLPQECQDHVGVWRY
+ LNKLVAEDNPISAMQVFDLRESMANGGGPACLRLRVVLTEEEQRAVNPAVMMNDALFT
+ ALNAWAERFYRDRLTAADLADPLLLREGREALDVLTRLLDLGSVYPFQQTGAADG"
+ misc_feature complement(1611660..1612982)
+ /locus_tag="SARI_01673"
+ /note="succinylarginine dihydrolase; Provisional; Region:
+ PRK13281"
+ /db_xref="CDD:237332"
+ gene complement(1612979..1614457)
+ /gene="astD"
+ /locus_tag="SARI_01674"
+ CDS complement(1612979..1614457)
+ /gene="astD"
+ /locus_tag="SARI_01674"
+ /inference="protein motif:HMMPfam:IPR002086"
+ /inference="protein motif:HMMPIR:IPR012303"
+ /inference="protein motif:ScanRegExp:IPR002086"
+ /inference="similar to AA sequence:SwissProt:Q8Z6G1"
+ /note="a high throughput screen identified this enzyme as
+ an aldehyde dehydrogenase with broad substrate
+ specificity; converts succinylglutamate semialdehyde and
+ NAD to succinylglutamate and NADH"
+ /codon_start=1
+ /transl_table=11
+ /product="succinylglutamic semialdehyde dehydrogenase"
+ /protein_id="YP_001570707.1"
+ /db_xref="GI:161503595"
+ /db_xref="InterPro:IPR002086"
+ /db_xref="InterPro:IPR012303"
+ /translation="MTLWINGDWITGQGERRSKTNPVSAEILWQGNDADTAQVAGACE
+ AARAAFPCWARQPFAARQAIVEKFAVLLEEHKAELTAVIARETGKPRWEAATEVTAMI
+ NKIAISIKAYHARTGEQTSELADGAATLRHRPHGVLAVFGPYNFPGHLPNGHIVPALL
+ AGNTLIFKPSELTPWTGETVIKLWERAGLPAGVLNLVQGGRETGHALSLLDDLDGLLF
+ TGSASTGYQLHRQLSGQPKKILALEMGGNNPLIIEDAEDIDAAVHLTLQSAFITAGQR
+ CTCARRLLVKQGVQGDAFLARLVDVAGRLQPGRWDDDPQPFIGGLISAQAAQHVIEAW
+ HQREALGGRTLLAPRKVKEGTSLLTPGIIELTGVTDVPDEEVFGPLLSVWRYDHFDEA
+ IHLANSTRFGLSCGLVSTDRAQFEQLLLEARAGIVNWNKPLTGAASTSPFGGVGASGN
+ HRPSAWYAADYCAWPMATLESPELTLPATLSPGLDFSRREAV"
+ misc_feature complement(1612997..1614457)
+ /gene="astD"
+ /locus_tag="SARI_01674"
+ /note="succinylglutamic semialdehyde dehydrogenase;
+ Reviewed; Region: astD; PRK09457"
+ /db_xref="CDD:181873"
+ misc_feature complement(1613051..1614346)
+ /gene="astD"
+ /locus_tag="SARI_01674"
+ /note="N-succinylglutamate 5-semialdehyde dehydrogenase,
+ AstD-like; Region: ALDH_SGSD_AstD; cd07095"
+ /db_xref="CDD:143414"
+ misc_feature complement(order(1613132..1613134,1613249..1613251,
+ 1613327..1613329,1613333..1613335,1613627..1613629,
+ 1613723..1613731,1613774..1613779,1613786..1613788,
+ 1613795..1613806,1613945..1613950,1613954..1613956,
+ 1613999..1614001,1614023..1614037))
+ /gene="astD"
+ /locus_tag="SARI_01674"
+ /note="NAD(P) binding site [chemical binding]; other site"
+ /db_xref="CDD:143414"
+ misc_feature complement(order(1613627..1613629,1613636..1613638,
+ 1613729..1613731,1614023..1614025))
+ /gene="astD"
+ /locus_tag="SARI_01674"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:143414"
+ gene complement(1614454..1615488)
+ /locus_tag="SARI_01675"
+ CDS complement(1614454..1615488)
+ /locus_tag="SARI_01675"
+ /inference="protein motif:HMMPfam:IPR007041"
+ /inference="similar to AA sequence:INSD:AAL20229.1"
+ /note="'KEGG: spt:SPA1540 1.4e-182 astA; arginine
+ succinyltransferase K00673;
+ COG: COG3138 Arginine/orniTHIne N-succinyltransferase beta
+ subunit;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="arginine succinyltransferase"
+ /protein_id="YP_001570708.1"
+ /db_xref="GI:161503596"
+ /db_xref="InterPro:IPR007041"
+ /translation="MRVIRPVEHADIAALMRLAGKTGGGLTSLPANEATLAARIERAR
+ KTWSDDLPKSEQGYVFVLEDSETGEVGGICAIEVAVGLNDPWYNYRVGTLVHASKELN
+ VYNALPTLFLSNDHTGSSELCTLFLDPEWRKEGNGYVLSKSRFMFMAAFRDKFNEKVV
+ AEMRGVIDEHGYSPFWQSLGKRFFSMDFSRADFLCGTGQKAFIAELMPKHPIYTHFLS
+ EEAQAVIGEVHPQTAPARAVLEKEGFRYRHYIDIFDGGPTLECDIDRVRAIRKSRLVE
+ IAEGQPAPGDYPACLVANENYHHFRAALVRADPQTSRLVFTAAQLDALKCRAGDHVRL
+ VRLCAEEKTV"
+ misc_feature complement(1614457..1615488)
+ /locus_tag="SARI_01675"
+ /note="arginine succinyltransferase; Provisional; Region:
+ PRK10456"
+ /db_xref="CDD:182474"
+ misc_feature complement(1614478..1615488)
+ /locus_tag="SARI_01675"
+ /note="Arginine/ornithine N-succinyltransferase beta
+ subunit [Amino acid transport and metabolism]; Region:
+ AstA; COG3138"
+ /db_xref="CDD:225680"
+ gene complement(1615479..1616705)
+ /locus_tag="SARI_01676"
+ CDS complement(1615479..1616705)
+ /locus_tag="SARI_01676"
+ /inference="protein motif:HMMPanther:IPR004636"
+ /inference="protein motif:HMMPanther:IPR005814"
+ /inference="protein motif:HMMPfam:IPR005814"
+ /inference="protein motif:HMMTigr:IPR004636"
+ /inference="protein motif:ScanRegExp:IPR005814"
+ /inference="similar to AA sequence:REFSEQ:YP_216313.1"
+ /note="catalyzes the transamination of
+ 2-N-succinylornithine and alpha-ketoglutarate into
+ 2-N-succinylglutamate semialdehyde and glutamate; also
+ functions as the catabolic acetylornithine
+ aminotransferase catalyzing the formation of
+ 2-N-acetylglutamate semialdehyde and glutamate from
+ 2-N-acetylornithine and alpha-ketoglutarate"
+ /codon_start=1
+ /transl_table=11
+ /product="bifunctional succinylornithine
+ transaminase/acetylornithine transaminase"
+ /protein_id="YP_001570709.1"
+ /db_xref="GI:161503597"
+ /db_xref="InterPro:IPR004636"
+ /db_xref="InterPro:IPR005814"
+ /translation="MSLSVTRENFDEWMVPVYVPAPFIPVRGEGSRLWDQQGKEYIDF
+ AGGIAVNALGHAHPALREALNEQASRFWHTGNGYTNEPALRLAKKLIDATFAERVFFC
+ NSGAEANEAALKLARKYAHDRVGNYKGGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAP
+ LPPDIRHAAYNDLNSASALIDDNTCAVIVEPIQGEGGVIPATKAFLQGLRELCDRHQA
+ LLIFDEVQTGVGRTGELYAYMHYGVTPDILTTAKALGGGFPIGAMLTTQDYASVMTPG
+ THGTTYGGNPLATAVAGKVLDIINTPEMQNGVRQRHDAFIERLTTINERFGMFSEIRG
+ LGLLLGCALQGEFAGKAKLIAQEAAKAGVMVLIAGGDVVRFAPALNVSDEEIATGLDR
+ FTQACGRIQTGGASCG"
+ misc_feature complement(1615488..1616705)
+ /locus_tag="SARI_01676"
+ /note="bifunctional succinylornithine
+ transaminase/acetylornithine transaminase; Provisional;
+ Region: PRK12381"
+ /db_xref="CDD:183486"
+ misc_feature complement(1615518..1616666)
+ /locus_tag="SARI_01676"
+ /note="Acetyl ornithine aminotransferase family. This
+ family belongs to pyridoxal phosphate (PLP)-dependent
+ aspartate aminotransferase superfamily (fold I). The major
+ groups in this CD correspond to ornithine
+ aminotransferase, acetylornithine aminotransferase;
+ Region: OAT_like; cd00610"
+ /db_xref="CDD:99735"
+ misc_feature complement(order(1615950..1615952,1616028..1616033,
+ 1616037..1616039,1616136..1616138,1616283..1616285,
+ 1616289..1616294,1616388..1616396))
+ /locus_tag="SARI_01676"
+ /note="inhibitor-cofactor binding pocket; inhibition site"
+ /db_xref="CDD:99735"
+ misc_feature complement(order(1615950..1615952,1616028..1616030,
+ 1616037..1616039,1616136..1616138,1616289..1616294,
+ 1616388..1616393))
+ /locus_tag="SARI_01676"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:99735"
+ misc_feature complement(1615950..1615952)
+ /locus_tag="SARI_01676"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:99735"
+ gene 1617150..1617956
+ /locus_tag="SARI_01677"
+ CDS 1617150..1617956
+ /locus_tag="SARI_01677"
+ /inference="protein motif:HMMPfam:IPR005135"
+ /inference="protein motif:HMMTigr:IPR000097"
+ /inference="protein motif:HMMTigr:IPR004808"
+ /inference="protein motif:ScanRegExp:IPR000097"
+ /inference="similar to AA sequence:INSD:AAO68838.1"
+ /note="removes the damaged DNA at cytosines and guanines
+ by cleaving on the 3' side of the AP site by a
+ beta-elimination reaction"
+ /codon_start=1
+ /transl_table=11
+ /product="exonuclease III"
+ /protein_id="YP_001570710.1"
+ /db_xref="GI:161503598"
+ /db_xref="InterPro:IPR000097"
+ /db_xref="InterPro:IPR004808"
+ /db_xref="InterPro:IPR005135"
+ /translation="MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDEMFPL
+ EEVAKLGYNVFYHGQKGHYGVALLTKATPISVRRGFPDDGEEAQRRIIMAEIPSPLGN
+ ITVINGYFPQGESRDHPLKFPAKAQFYQNLQNYLETELKCDNPVLIMGDMNISPTDLD
+ IGIGEENRKRWLRTGKCSFLPEEREWMSRLLKWGLVDTFRQANPETVDKFSWFDYRSK
+ GFVDNRGLRIDLLLASRPLAERCAETGIDYDIRSMEKPSDHAPVWATFRV"
+ misc_feature 1617150..1617947
+ /locus_tag="SARI_01677"
+ /note="Escherichia coli exonuclease III (ExoIII) and
+ Neisseria meningitides NExo-like subfamily of the ExoIII
+ family purinic/apyrimidinic (AP) endonucleases; Region:
+ ExoIII-like_AP-endo; cd09086"
+ /db_xref="CDD:197320"
+ misc_feature order(1617168..1617170,1617249..1617251,1617474..1617476,
+ 1617600..1617602,1617606..1617608,1617834..1617836,
+ 1617921..1617926)
+ /locus_tag="SARI_01677"
+ /note="putative catalytic site [active]"
+ /db_xref="CDD:197320"
+ misc_feature order(1617168..1617170,1617249..1617251,1617474..1617476,
+ 1617483..1617485,1617600..1617602,1617606..1617608,
+ 1617924..1617926)
+ /locus_tag="SARI_01677"
+ /note="putative phosphate binding site [ion binding];
+ other site"
+ /db_xref="CDD:197320"
+ misc_feature order(1617174..1617179,1617183..1617191,1617249..1617251,
+ 1617327..1617332,1617474..1617476,1617483..1617485,
+ 1617489..1617491,1617510..1617512,1617600..1617602,
+ 1617606..1617608,1617783..1617785,1617792..1617797,
+ 1617825..1617827,1617831..1617836,1617912..1617917,
+ 1617924..1617926)
+ /locus_tag="SARI_01677"
+ /note="active site"
+ /db_xref="CDD:197320"
+ misc_feature order(1617174..1617176,1617249..1617251,1617921..1617926)
+ /locus_tag="SARI_01677"
+ /note="metal binding site A [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:197320"
+ misc_feature order(1617174..1617179,1617183..1617191,1617327..1617332,
+ 1617474..1617476,1617483..1617485,1617489..1617491,
+ 1617510..1617512,1617792..1617797,1617912..1617917)
+ /locus_tag="SARI_01677"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:197320"
+ misc_feature order(1617474..1617476,1617483..1617485,1617600..1617602,
+ 1617606..1617608,1617783..1617785,1617825..1617827,
+ 1617831..1617833,1617924..1617926)
+ /locus_tag="SARI_01677"
+ /note="putative AP binding site [nucleotide binding];
+ other site"
+ /db_xref="CDD:197320"
+ misc_feature order(1617474..1617476,1617600..1617602,1617606..1617608,
+ 1617924..1617926)
+ /locus_tag="SARI_01677"
+ /note="putative metal binding site B [ion binding]; other
+ site"
+ /db_xref="CDD:197320"
+ gene 1618029..1618445
+ /locus_tag="SARI_01678"
+ CDS 1618029..1618445
+ /locus_tag="SARI_01678"
+ /inference="protein motif:BlastProDom:IPR002667"
+ /inference="protein motif:FPrintScan:IPR000086"
+ /inference="protein motif:Gene3D:IPR000086"
+ /inference="protein motif:HMMPfam:IPR000086"
+ /inference="protein motif:ScanRegExp:IPR000086"
+ /inference="protein motif:superfamily:IPR000086"
+ /inference="similar to AA sequence:REFSEQ:YP_216310.1"
+ /note="'KEGG: sec:SC1323 4.2e-69 nudG; putative mutator
+ MutT protein K08320;
+ COG: COG0494 NTP pyrophosphohydrolases including oxidative
+ damage repair enzymes;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="pyrimidine (deoxy)nucleoside triphosphate
+ pyrophosphohydrolase"
+ /protein_id="YP_001570711.1"
+ /db_xref="GI:161503599"
+ /db_xref="InterPro:IPR000086"
+ /db_xref="InterPro:IPR002667"
+ /translation="MIKKLDVVAAIIERDGKILLAQRPNHADQAGLWEFAGGKVEPGE
+ TQPQALVRELREELGIDATPGAYIASHQRDISGRRIHLHAWHVPAFNGLIRALEHQAL
+ AWCTPEEALEYPLVPADIPLLQTFMALRDARLTDSC"
+ misc_feature 1618041..1618397
+ /locus_tag="SARI_01678"
+ /note="The MutT pyrophosphohydrolase is a prototypical
+ Nudix hydrolase that catalyzes the hydrolysis of
+ nucleoside and deoxynucleoside triphosphates (NTPs and
+ dNTPs) by substitution at a beta-phosphorus to yield a
+ nucleotide monophosphate (NMP) and inorganic...; Region:
+ MutT_pyrophosphohydrolase; cd03425"
+ /db_xref="CDD:239517"
+ misc_feature order(1618041..1618043,1618047..1618049,1618140..1618145,
+ 1618149..1618151,1618185..1618187,1618194..1618199,
+ 1618266..1618268,1618320..1618322,1618383..1618385)
+ /locus_tag="SARI_01678"
+ /note="active site"
+ /db_xref="CDD:239517"
+ misc_feature order(1618041..1618043,1618047..1618049,1618140..1618145,
+ 1618260..1618262,1618266..1618268,1618383..1618385)
+ /locus_tag="SARI_01678"
+ /note="8-oxo-dGMP binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:239517"
+ misc_feature 1618140..1618208
+ /locus_tag="SARI_01678"
+ /note="nudix motif; other site"
+ /db_xref="CDD:239517"
+ misc_feature order(1618185..1618187,1618194..1618199)
+ /locus_tag="SARI_01678"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:239517"
+ gene complement(1618405..1618680)
+ /locus_tag="SARI_01679"
+ CDS complement(1618405..1618680)
+ /locus_tag="SARI_01679"
+ /inference="protein motif:HMMPfam:IPR009971"
+ /inference="similar to AA sequence:REFSEQ:YP_150789.1"
+ /note="'COG: NOG11328 non supervised orthologous group;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570712.1"
+ /db_xref="GI:161503600"
+ /db_xref="InterPro:IPR009971"
+ /translation="MRRSLVAAAMAVIPVVALANQSSRPDIQVNVPPEVFSTRGQSSQ
+ PCIQCCVYLDQNYSEGAVIKVEGVLLQCQRDEKTISTNPLVWRRVTP"
+ misc_feature complement(1618408..1618581)
+ /locus_tag="SARI_01679"
+ /note="Protein of unknown function (DUF1496); Region:
+ DUF1496; pfam07383"
+ /db_xref="CDD:191736"
+ gene 1618919..1620262
+ /locus_tag="SARI_01680"
+ CDS 1618919..1620262
+ /locus_tag="SARI_01680"
+ /inference="protein motif:HMMPfam:IPR006096"
+ /inference="protein motif:HMMPfam:IPR006097"
+ /inference="protein motif:ScanRegExp:IPR006095"
+ /inference="similar to AA sequence:REFSEQ:YP_150790.1"
+ /note="converts 2-oxoglutarate to glutamate; in
+ Escherichia coli this enzyme plays a role in glutamate
+ synthesis when the cell is under energy restriction; uses
+ NADPH; forms a homohexamer"
+ /codon_start=1
+ /transl_table=11
+ /product="glutamate dehydrogenase"
+ /protein_id="YP_001570713.1"
+ /db_xref="GI:161503601"
+ /db_xref="InterPro:IPR006095"
+ /db_xref="InterPro:IPR006096"
+ /db_xref="InterPro:IPR006097"
+ /translation="MDQTCSLESFLNHVQKRDPHQTEFAQAVREVMTTLWPFLEQNPR
+ YRHMSLLERLVEPERVIQFRVVWLDDRNQVQVNRAWRVQFNAAIGPYKGGMRFHPSVN
+ LSILKFLGFEQTFKNALTTLPMGGGKGGSDFDPKGKSEGEVMRFCQALMTELYRHLGP
+ DTDVPAGDIGVGGREVGFMAGMMRKLSNNSACVFTGKGLSFGGSLIRPEATGYGLVYF
+ TEAMLKRHGLGFEGMRVAVSGSGNVAQYAIEKAMAFGARVVTASDSSGTVVDESGFTQ
+ EKLARLCEIKASRDGRVADYAREFGLIYLESQQPWSVPVDIALPCATQNELDVDAARV
+ LIANGVKAVAEGANMPTTIEATDLFLEAGVLFAPGKAANAGGVATSGLEMAQNAARLS
+ WKAEKVDARLHHIMLDIHHSCVEYGSDNKHINYVQGANIAGFVKVADAMLAQGVI"
+ misc_feature 1618919..1620259
+ /locus_tag="SARI_01680"
+ /note="glutamate dehydrogenase; Provisional; Region:
+ PRK09414"
+ /db_xref="CDD:181834"
+ misc_feature 1619087..1619476
+ /locus_tag="SARI_01680"
+ /note="Glu/Leu/Phe/Val dehydrogenase, dimerisation domain;
+ Region: ELFV_dehydrog_N; pfam02812"
+ /db_xref="CDD:202408"
+ misc_feature 1619501..1620256
+ /locus_tag="SARI_01680"
+ /note="NAD(P) binding domain of glutamate dehydrogenase,
+ subgroup 2; Region: NAD_bind_2_Glu_DH; cd05313"
+ /db_xref="CDD:133455"
+ misc_feature order(1619639..1619647,1619705..1619710,1619882..1619887,
+ 1619954..1619962)
+ /locus_tag="SARI_01680"
+ /note="NAD(P) binding site [chemical binding]; other site"
+ /db_xref="CDD:133455"
+ gene complement(1620292..1622241)
+ /locus_tag="SARI_01681"
+ CDS complement(1620292..1622241)
+ /locus_tag="SARI_01681"
+ /inference="protein motif:Gene3D:IPR013824"
+ /inference="protein motif:HMMPanther:IPR000380"
+ /inference="protein motif:HMMPfam:IPR006171"
+ /inference="protein motif:HMMPfam:IPR013497"
+ /inference="protein motif:HMMSmart:IPR003601"
+ /inference="protein motif:HMMSmart:IPR003602"
+ /inference="protein motif:HMMSmart:IPR006154"
+ /inference="protein motif:HMMTigr:IPR005738"
+ /inference="protein motif:ScanRegExp:IPR000380"
+ /note="decatenates replicating daughter chromosomes"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA topoisomerase III"
+ /protein_id="YP_001570714.1"
+ /db_xref="GI:161503602"
+ /db_xref="InterPro:IPR000380"
+ /db_xref="InterPro:IPR003601"
+ /db_xref="InterPro:IPR003602"
+ /db_xref="InterPro:IPR005738"
+ /db_xref="InterPro:IPR006154"
+ /db_xref="InterPro:IPR006171"
+ /db_xref="InterPro:IPR013497"
+ /db_xref="InterPro:IPR013824"
+ /translation="MRLFIAEKPSLGRAIADVLPKPHRKGDGFIECGNGQVVTWCIGH
+ LLEQAQPDAYDSRYARWNLADLPIVPEKWQLQPRPSVTKQLNVIKRFLHGAGEIIHAG
+ DPDREGQLLVDEVLDYLQLPAEKRQRVQRCLINDLNPQAVERAIERLRANSDFVPLCV
+ SALARARADWLYGINMTRAYTILGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVA
+ KDFFEVKAHIVTPADERFTAIWQPSEACEPYQDEEGRLLHRPLAEHVVNRINGQPALV
+ TSYNDKRESESAPLPFSLSTLQIEAAKRFGLSAQNVLDICQKLYETHKLITYPRSDCR
+ YLPEEHFAGRQAVMNAISVHAPDLLPQPVVDPDTRNRCWDDKKVDAHHAIIPTARSSS
+ VHLTENEAKVYTLIARQYLMQFCPDAVFRKCVIELEIAKGKFVAKARFLAEAGWRTLL
+ GSKERDEENDGTPLPVVAKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQ
+ DKDLKKILRATDGLGTEATRAGIIELLFKRSFLTKKGRYIHSTEAGKALIHSLPEMAA
+ RPDMTAHWESVLTQISEKQCRYQDFMQPLVGTLYQLIDQAKRTPVKRFRGIVAPDGGE
+ KKKSAPRKRAGKKKPPAEETGRQAE"
+ misc_feature complement(1620382..1622241)
+ /locus_tag="SARI_01681"
+ /note="DNA topoisomerase III; Provisional; Region:
+ PRK07726"
+ /db_xref="CDD:236078"
+ misc_feature complement(1621795..1622241)
+ /locus_tag="SARI_01681"
+ /note="TOPRIM_TopoIA_TopoIII: The topoisomerase-primase
+ (TORPIM) domain found in members of the type IA family of
+ DNA topoisomerases (Topo IA) similar to topoisomerase III.
+ Type IA DNA topoisomerases remove (relax) negative
+ supercoils in the DNA by: cleaving...; Region:
+ TOPRIM_TopoIA_TopoIII; cd03362"
+ /db_xref="CDD:173782"
+ misc_feature complement(order(1621921..1621923,1621927..1621929,
+ 1621933..1621935,1622209..1622211,1622218..1622223))
+ /locus_tag="SARI_01681"
+ /note="active site"
+ /db_xref="CDD:173782"
+ misc_feature complement(order(1621891..1621896,1621900..1621905,
+ 1621924..1621926,1621930..1621932,1622200..1622202))
+ /locus_tag="SARI_01681"
+ /note="putative interdomain interaction site [polypeptide
+ binding]; other site"
+ /db_xref="CDD:173782"
+ misc_feature complement(order(1621927..1621929,1621933..1621935))
+ /locus_tag="SARI_01681"
+ /note="putative metal-binding site [ion binding]; other
+ site"
+ /db_xref="CDD:173782"
+ misc_feature complement(1621924..1621926)
+ /locus_tag="SARI_01681"
+ /note="putative nucleotide binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:173782"
+ misc_feature complement(1620433..1621773)
+ /locus_tag="SARI_01681"
+ /note="DNA Topoisomerase, subtype IA; DNA-binding,
+ ATP-binding and catalytic domain of bacterial DNA
+ topoisomerases I and III, and eukaryotic DNA topoisomerase
+ III and eubacterial and archael reverse gyrases.
+ Topoisomerases clevage single or double stranded DNA...;
+ Region: TOP1Ac; cd00186"
+ /db_xref="CDD:238110"
+ misc_feature complement(order(1621603..1621665,1621693..1621773))
+ /locus_tag="SARI_01681"
+ /note="domain I; other site"
+ /db_xref="CDD:238110"
+ misc_feature complement(order(1620628..1620633,1620643..1620645,
+ 1620649..1620654,1620661..1620666,1621252..1621254,
+ 1621279..1621281,1621291..1621293,1621711..1621713,
+ 1621723..1621725,1621735..1621737,1621744..1621749))
+ /locus_tag="SARI_01681"
+ /note="DNA binding groove [nucleotide binding]"
+ /db_xref="CDD:238110"
+ misc_feature complement(order(1620556..1620558,1621618..1621620,
+ 1621630..1621632))
+ /locus_tag="SARI_01681"
+ /note="phosphate binding site [ion binding]; other site"
+ /db_xref="CDD:238110"
+ misc_feature complement(order(1620784..1620816,1620892..1620948,
+ 1620952..1620996,1621381..1621428,1621570..1621590))
+ /locus_tag="SARI_01681"
+ /note="domain II; other site"
+ /db_xref="CDD:238110"
+ misc_feature complement(order(1620997..1621059,1621081..1621104,
+ 1621186..1621269,1621273..1621356,1621360..1621380))
+ /locus_tag="SARI_01681"
+ /note="domain III; other site"
+ /db_xref="CDD:238110"
+ misc_feature complement(order(1620598..1620600,1620664..1620666,
+ 1620670..1620672,1621018..1621020,1621030..1621032,
+ 1621039..1621041,1621099..1621101,1621327..1621335,
+ 1621345..1621347))
+ /locus_tag="SARI_01681"
+ /note="nucleotide binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:238110"
+ misc_feature complement(order(1621099..1621101,1621252..1621254,
+ 1621258..1621260))
+ /locus_tag="SARI_01681"
+ /note="catalytic site [active]"
+ /db_xref="CDD:238110"
+ misc_feature complement(order(1620433..1620540,1620556..1620600,
+ 1620610..1620681,1620733..1620783))
+ /locus_tag="SARI_01681"
+ /note="domain IV; other site"
+ /db_xref="CDD:238110"
+ gene complement(1622246..1623295)
+ /locus_tag="SARI_01682"
+ CDS complement(1622246..1623295)
+ /locus_tag="SARI_01682"
+ /inference="protein motif:HMMPfam:IPR000728"
+ /inference="protein motif:HMMPfam:IPR010918"
+ /inference="protein motif:HMMPIR:IPR004536"
+ /inference="protein motif:HMMTigr:IPR004536"
+ /inference="similar to AA sequence:REFSEQ:YP_150792.1"
+ /note="catalyzes the formation of selenophosphate from
+ selenide and ATP"
+ /codon_start=1
+ /transl_table=11
+ /product="selenophosphate synthetase"
+ /protein_id="YP_001570715.1"
+ /db_xref="GI:161503603"
+ /db_xref="InterPro:IPR000728"
+ /db_xref="InterPro:IPR004536"
+ /db_xref="InterPro:IPR010918"
+ /translation="MSMSEQAIRLTQYSHGAGCGCKISPKVLETILHSEQAKFVDPNL
+ LVGNETRDDAAVYDLGNGTSIISTTDFFMPIVDNPFDFGRIAATNAISDIFAMGGKPI
+ MAIAILGWPINTLSPDIAREVTEGGRFACRQAGIALAGGHSIDAPEPIFGLAVTGVVP
+ TERVKKNSTAQAGCKLFLTKPLGIGVLTTAEKKSLLKPEHQGLATEVMCRMNVAGAAF
+ ANIDGVKAMTDVTGFGLLGHLSEMCQGAGVQALLRYQDIPKLPGVEEYIALGAVPGGT
+ DRNFASYGHLMSDMPREVRSLLCDPQTSGGLLLAVTPDAEDKVKATAAEFGIDLTAIG
+ ELVDARGGRAMVEIH"
+ misc_feature complement(1622252..1623289)
+ /locus_tag="SARI_01682"
+ /note="selenophosphate synthetase; Provisional; Region:
+ PRK00943"
+ /db_xref="CDD:234870"
+ misc_feature complement(1622288..1623268)
+ /locus_tag="SARI_01682"
+ /note="Selenophosphate synthetase (SelD) catalyzes the
+ conversion of selenium to selenophosphate which is
+ required by a number of bacterial, archaeal and eukaryotic
+ organisms for synthesis of Secys-tRNA, the precursor of
+ selenocysteine in selenoenzymes. The...; Region: SelD;
+ cd02195"
+ /db_xref="CDD:100031"
+ misc_feature complement(order(1622573..1622575,1622834..1622836,
+ 1622846..1622851,1622870..1622872,1622969..1622971,
+ 1622978..1622980,1622987..1622989,1623017..1623019,
+ 1623083..1623085,1623089..1623091,1623095..1623106))
+ /locus_tag="SARI_01682"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:100031"
+ misc_feature complement(order(1622870..1622878,1623017..1623019,
+ 1623029..1623031))
+ /locus_tag="SARI_01682"
+ /note="putative ATP binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:100031"
+ unsure 1623036..1623162
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(1623407..1623958)
+ /locus_tag="SARI_01683"
+ CDS complement(1623407..1623958)
+ /locus_tag="SARI_01683"
+ /inference="protein motif:HMMPfam:IPR000415"
+ /inference="similar to AA sequence:INSD:CAD02058.1"
+ /note="'KEGG: sbo:SBO_1322 2.3e-86 ydjA; hypothetical
+ protein;
+ COG: COG0778 Nitroreductase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570716.1"
+ /db_xref="GI:161503604"
+ /db_xref="InterPro:IPR000415"
+ /translation="MDALELLVNRRSASRLAEPAPVGEQLQNILRAGMRVPDHKSLQP
+ WRFFVIEGEGRHRFSAVLEQGAVAAGDDEKAIEKARNAPFRAPLIITVVAKCEENHKV
+ PVWEQEMSAGCAVMAMQMAAIAQGFNGIWRSGALTESPVVREAFECRPQDKIVGFLYL
+ GTPQLKASTTISTPDPTPFVRYF"
+ misc_feature complement(1623473..1623949)
+ /locus_tag="SARI_01683"
+ /note="Nitroreductase-like family which includes NADH
+ oxidase and arsenite oxidiase. NADH oxidase catalyses the
+ oxidation of NAD(P)H and accepts a wide broad range of
+ compounds as electron acceptors, such as nitrocompound.
+ Arsenite oxidase in a...; Region: Arsenite_oxidase;
+ cd02135"
+ /db_xref="CDD:239050"
+ misc_feature complement(order(1623557..1623562,1623839..1623841,
+ 1623914..1623916,1623920..1623922,1623926..1623928))
+ /locus_tag="SARI_01683"
+ /note="putative FMN binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:239050"
+ gene 1624132..1625988
+ /locus_tag="SARI_01684"
+ CDS 1624132..1625988
+ /locus_tag="SARI_01684"
+ /inference="protein motif:BlastProDom:IPR002142"
+ /inference="protein motif:HMMPfam:IPR002142"
+ /inference="protein motif:HMMPIR:IPR004634"
+ /inference="protein motif:HMMTigr:IPR004634"
+ /inference="protein motif:HMMTigr:IPR004635"
+ /note="SppA; catalyzes the degradation of cleaved signal
+ peptides; essential to maintain secretion of mature
+ proteins across the membrane"
+ /codon_start=1
+ /transl_table=11
+ /product="protease 4"
+ /protein_id="YP_001570717.1"
+ /db_xref="GI:161503605"
+ /db_xref="InterPro:IPR002142"
+ /db_xref="InterPro:IPR004634"
+ /db_xref="InterPro:IPR004635"
+ /translation="MRTLWRFIAGFFKWTWRLLNFVREMVLNLFFIFLVLVGVGIWMQ
+ IGNGSNSEQTARGALLLDISGVIVDKPSTNHRLGALGRQLFGASSNRLQENSLFDIVN
+ TIRQAKDDRNITGIVLDLKNFTGADQPSMRYIGKALREFRDSGKPVFAVGENYSQGQY
+ YLASFANKIWLSPQGQINLHGFATNGLYYKTLLDKLKVSTHVFRVGTYKSAVEPFIRD
+ DMSPAAREADSRWIGELWQNYLNTVSTNRQISPQQLFPGAQAIIDGLTSVGGDTAKYA
+ LDHKLVDALASSADVEKALTKQFGWSKTENNYRAISYYDYSLKTPADTGGTIAVIFAN
+ GAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIVLRVNSPGGSVNASEVIRAELAAV
+ KAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLTGSIGIFGVINTVENSLSSIGV
+ HSDGVSTSPLAEISMTKALSPEVQQMMQLSIEYGYKRFITLVAEARKRTPEQIDKIAQ
+ GHVWTGQDAKANGLVDKLGDFDDAVAKAAALAKLKQWHLDYYQNEPTVLDMIMDSMTG
+ SVRAMLPEAIQAMLPAPLVSAANTVKAEGDKLAAFNDPQNRYAFCLTCANVR"
+ misc_feature 1624132..1625985
+ /locus_tag="SARI_01684"
+ /note="protease 4; Provisional; Region: PRK10949"
+ /db_xref="CDD:182860"
+ misc_feature 1624306..1625022
+ /locus_tag="SARI_01684"
+ /note="Signal peptide peptidase A (SppA) 67K type, a
+ serine protease, has catalytic Ser-Lys dyad; Region:
+ S49_SppA_67K_type; cd07018"
+ /db_xref="CDD:132929"
+ misc_feature order(1624321..1624323,1624486..1624488,1624600..1624602,
+ 1624645..1624647,1624651..1624653,1624675..1624686,
+ 1624837..1624839,1624933..1624941,1624945..1624947,
+ 1624954..1624956)
+ /locus_tag="SARI_01684"
+ /note="tandem repeat interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:132929"
+ misc_feature order(1624423..1624425,1624444..1624446,1624525..1624527,
+ 1624831..1624833,1624843..1624845)
+ /locus_tag="SARI_01684"
+ /note="oligomer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:132929"
+ misc_feature 1624600..1624602
+ /locus_tag="SARI_01684"
+ /note="active site residues [active]"
+ /db_xref="CDD:132929"
+ misc_feature 1625113..1625724
+ /locus_tag="SARI_01684"
+ /note="Signal peptide peptidase A (SppA), a serine
+ protease, has catalytic Ser-Lys dyad; Region: S49_SppA_1;
+ cd07019"
+ /db_xref="CDD:132930"
+ misc_feature order(1625131..1625133,1625242..1625244,1625356..1625358,
+ 1625401..1625403,1625407..1625409,1625431..1625442,
+ 1625584..1625586,1625656..1625664,1625668..1625670,
+ 1625677..1625679)
+ /locus_tag="SARI_01684"
+ /note="tandem repeat interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:132930"
+ misc_feature order(1625179..1625181,1625200..1625202,1625278..1625280,
+ 1625476..1625478,1625482..1625496,1625578..1625580,
+ 1625590..1625592)
+ /locus_tag="SARI_01684"
+ /note="oligomer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:132930"
+ misc_feature 1625356..1625358
+ /locus_tag="SARI_01684"
+ /note="active site residues [active]"
+ /db_xref="CDD:132930"
+ gene 1626075..1627091
+ /gene="ansA"
+ /locus_tag="SARI_01685"
+ CDS 1626075..1627091
+ /gene="ansA"
+ /locus_tag="SARI_01685"
+ /inference="protein motif:BlastProDom:IPR006034"
+ /inference="protein motif:HMMPanther:IPR006034"
+ /inference="protein motif:HMMPfam:IPR006034"
+ /inference="protein motif:HMMTigr:IPR006033"
+ /inference="protein motif:ScanRegExp:IPR006034"
+ /inference="protein motif:superfamily:IPR006034"
+ /inference="similar to AA sequence:INSD:AAL20219.1"
+ /note="converts asparagine to aspartate and ammonia"
+ /codon_start=1
+ /transl_table=11
+ /product="cytoplasmic asparaginase I"
+ /protein_id="YP_001570718.1"
+ /db_xref="GI:161503606"
+ /db_xref="InterPro:IPR006033"
+ /db_xref="InterPro:IPR006034"
+ /translation="MQKKSIYVAYTGGTIGMQRSEQGYIPVSGHLQRQLALMPEFHRP
+ EMPDFTIHEYAPLMDSSDMTPEDWQHIAEDIKTHYDEYDGFVILHGTDTMAFTASALS
+ FMLENLGKPVIVTGSQIPLAELRSDGQINLLNALYVAANYPINEVTLFFNNRLFRGNR
+ TTKAHADGFDAFASPNLPPLLEAGIHIRRLNTPPAPHGSGELIVHPITPQPIGVVTIY
+ PGISAEVVCNFLRQPVKALILRSYGVGNAPQNKAFLQELKEASSRGIVVINLTQCMSG
+ RVNMGGYATGNALAHAGVIGGADMTVEATLTKLHYLLSQGLDTQAIRSAMAQNLRGEL
+ TPDD"
+ misc_feature 1626084..1627043
+ /gene="ansA"
+ /locus_tag="SARI_01685"
+ /note="Type I (cytosolic) bacterial L-asparaginase;
+ Region: L-asparaginase_I; cd08963"
+ /db_xref="CDD:199207"
+ misc_feature order(1626111..1626116,1626252..1626257,1626342..1626350,
+ 1626423..1626425,1626561..1626563)
+ /gene="ansA"
+ /locus_tag="SARI_01685"
+ /note="active site"
+ /db_xref="CDD:199207"
+ misc_feature order(1626114..1626116,1626141..1626149,1626240..1626242,
+ 1626249..1626269,1626273..1626278,1626348..1626353,
+ 1626360..1626362,1626426..1626431,1626561..1626578,
+ 1626702..1626704,1626708..1626737,1626741..1626746,
+ 1626753..1626755,1626762..1626767,1626792..1626794,
+ 1626798..1626806,1626816..1626818,1626888..1626890,
+ 1626897..1626911,1626921..1626923,1626978..1626980,
+ 1626990..1626992,1627002..1627004)
+ /gene="ansA"
+ /locus_tag="SARI_01685"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:199207"
+ gene 1627118..1627774
+ /locus_tag="SARI_01686"
+ CDS 1627118..1627774
+ /locus_tag="SARI_01686"
+ /inference="protein motif:Gene3D:IPR000868"
+ /inference="protein motif:HMMPfam:IPR000868"
+ /inference="protein motif:superfamily:IPR000868"
+ /inference="similar to AA sequence:INSD:AAL20218.1"
+ /note="catalyzes the formation of nicotinate from
+ nicotinamide in NAD biosynthesis and the formation of
+ pyrazinoate from pyrazinamide"
+ /codon_start=1
+ /transl_table=11
+ /product="nicotinamidase/pyrazinamidase"
+ /protein_id="YP_001570719.1"
+ /db_xref="GI:161503607"
+ /db_xref="InterPro:IPR000868"
+ /translation="MTNRALLLVDLQNDFCAGGALAVPEGDSTIDIANRLIDWCQPRQ
+ IPVLASQDWHPVGHGSFASQHQAEPYSQGELDGLPQTLWPDHCVQHTDGAALHPLLNQ
+ HAIDATIYKGENPLIDSYSAFFDNEHRQKTTLDAWLREHDVTELIVLGLATDYCVKFT
+ VLDALQLGYAVNVITDGCRGVNIQPQDSAHAFMEMAAAGATLYTLADWEETQGQVVAK
+ "
+ misc_feature 1627124..1627669
+ /locus_tag="SARI_01686"
+ /note="Nicotinamidase/pyrazinamidase (PZase).
+ Nicotinamidase, a ubiquitous enzyme in prokaryotes,
+ converts nicotinamide to nicotinic acid (niacin) and
+ ammonia, which in turn can be recycled to make
+ nicotinamide adenine dinucleotide (NAD). The same enzyme
+ is...; Region: nicotinamidase; cd01011"
+ /db_xref="CDD:238493"
+ misc_feature 1627130..1627678
+ /locus_tag="SARI_01686"
+ /note="Isochorismatase family; Region: Isochorismatase;
+ pfam00857"
+ /db_xref="CDD:216156"
+ misc_feature order(1627145..1627147,1627448..1627450,1627583..1627585)
+ /locus_tag="SARI_01686"
+ /note="catalytic triad [active]"
+ /db_xref="CDD:238493"
+ misc_feature order(1627271..1627273,1627277..1627279,1627373..1627375)
+ /locus_tag="SARI_01686"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:238493"
+ misc_feature 1627568..1627573
+ /locus_tag="SARI_01686"
+ /note="conserved cis-peptide bond; other site"
+ /db_xref="CDD:238493"
+ gene complement(1628022..1628300)
+ /locus_tag="SARI_01687"
+ CDS complement(1628022..1628300)
+ /locus_tag="SARI_01687"
+ /inference="protein motif:HMMPfam:IPR009749"
+ /inference="similar to AA sequence:REFSEQ:NP_456220.1"
+ /note="'COG: COG3139 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570720.1"
+ /db_xref="GI:161503608"
+ /db_xref="InterPro:IPR009749"
+ /translation="MNLDEIINSMTPEVYQRLSTAVELGKWPDGVALTPEQKENSLQL
+ VMLWQARHNTEAQHMTIDTHGQMVMKSKQQLKADFGITPKPIATLKMQ"
+ misc_feature complement(1628031..1628300)
+ /locus_tag="SARI_01687"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG3139"
+ /db_xref="CDD:225681"
+ gene complement(1628342..1628755)
+ /locus_tag="SARI_01688"
+ CDS complement(1628342..1628755)
+ /locus_tag="SARI_01688"
+ /inference="protein motif:BlastProDom:IPR002579"
+ /inference="protein motif:HMMPfam:IPR002579"
+ /inference="protein motif:HMMTigr:IPR002579"
+ /inference="protein motif:superfamily:IPR011057"
+ /inference="similar to AA sequence:INSD:AAX65210.1"
+ /note="this stereospecific enzymes reduces the R isomer of
+ methionine sulfoxide while MsrA reduces the S form;
+ provides protection against oxidative stress"
+ /codon_start=1
+ /transl_table=11
+ /product="methionine sulfoxide reductase B"
+ /protein_id="YP_001570721.1"
+ /db_xref="GI:161503609"
+ /db_xref="InterPro:IPR002579"
+ /db_xref="InterPro:IPR011057"
+ /translation="MANQLSAEELKKKLSEMQFYVTQNRGTEPPFTGRLLHNKRDGVY
+ HCLVCEAPLFHSHTKYDSGCGWPSFYQPVSKEAIRYIDDFSHGMQRVEIRCGNCDAHL
+ GHVFPDGPQPTGERYCVNSASLAFSDEKNGDQLKG"
+ misc_feature complement(1628363..1628755)
+ /locus_tag="SARI_01688"
+ /note="methionine sulfoxide reductase B; Provisional;
+ Region: PRK00222"
+ /db_xref="CDD:234692"
+ misc_feature complement(1628372..1628734)
+ /locus_tag="SARI_01688"
+ /note="SelR domain; Region: SelR; pfam01641"
+ /db_xref="CDD:201899"
+ unsure 1628616..1628699
+ /note="Sequence derived from one plasmid subclone"
+ gene 1629097..1629657
+ /locus_tag="SARI_01689"
+ CDS 1629097..1629657
+ /locus_tag="SARI_01689"
+ /inference="protein motif:FPrintScan:IPR000173"
+ /inference="protein motif:HMMPanther:IPR000173"
+ /inference="protein motif:HMMPfam:IPR000173"
+ /inference="protein motif:ScanRegExp:IPR000173"
+ /inference="similar to AA sequence:INSD:AAL20215.1"
+ /note="'KEGG: stt:t1169 5.9e-95 gapA; glyceraldehyde
+ 3-phosphate dehydrogenase A K00134;
+ COG: COG0057 Glyceraldehyde-3-phosphate
+ dehydrogenase/erythrose-4-phosphate dehydrogenase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570722.1"
+ /db_xref="GI:161503610"
+ /db_xref="InterPro:IPR000173"
+ /translation="MTIKVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDAEYMAYM
+ LKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGIFLT
+ DETARKHITAGAKKVVLTGPSKDNTPMFVKGANFDKYEGQDIVSNASCTTNCLAPLAK
+ VINDNFGIIEGLMTTVHATTATQKNR"
+ misc_feature 1629103..1629543
+ /locus_tag="SARI_01689"
+ /note="Glyceraldehyde 3-phosphate dehydrogenase, NAD
+ binding domain; Region: Gp_dh_N; pfam00044"
+ /db_xref="CDD:215675"
+ misc_feature 1629559..>1629648
+ /locus_tag="SARI_01689"
+ /note="Glyceraldehyde 3-phosphate dehydrogenase,
+ C-terminal domain; Region: Gp_dh_C; pfam02800"
+ /db_xref="CDD:217235"
+ gene 1629749..1630093
+ /locus_tag="SARI_01690"
+ CDS 1629749..1630093
+ /locus_tag="SARI_01690"
+ /inference="protein motif:FPrintScan:IPR000173"
+ /inference="protein motif:HMMPanther:IPR000173"
+ /inference="protein motif:HMMPfam:IPR000173"
+ /inference="similar to AA sequence:INSD:AAP16937.1"
+ /note="'KEGG: ecs:ECs2488 4.6e-56
+ glyceraldehyde-3-phosphate dehydrogenase A K00134;
+ COG: COG0057 Glyceraldehyde-3-phosphate
+ dehydrogenase/erythrose-4-phosphate dehydrogenase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570723.1"
+ /db_xref="GI:161503611"
+ /db_xref="InterPro:IPR000173"
+ /translation="MLPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVK
+ AAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYS
+ NKVLDLIAHISK"
+ misc_feature <1629752..1630033
+ /locus_tag="SARI_01690"
+ /note="Glyceraldehyde 3-phosphate dehydrogenase,
+ C-terminal domain; Region: Gp_dh_C; pfam02800"
+ /db_xref="CDD:217235"
+ gene 1630416..1631300
+ /locus_tag="SARI_01691"
+ CDS 1630416..1631300
+ /locus_tag="SARI_01691"
+ /inference="protein motif:HMMPfam:IPR008183"
+ /inference="protein motif:superfamily:IPR011013"
+ /inference="similar to AA sequence:REFSEQ:YP_150800.1"
+ /note="'KEGG: tbd:Tbd_2730 1.2e-34 dihydroxy-acid
+ dehydratase K01687;
+ COG: COG0676 Uncharacterized enzymes related to aldose
+ 1-epimerase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570724.1"
+ /db_xref="GI:161503612"
+ /db_xref="InterPro:IPR008183"
+ /db_xref="InterPro:IPR011013"
+ /translation="MINKIFALPVIEQVTPVFSRRQLDDLELIVVDHPQVKASFALQG
+ SHLLSWKPAGEEEVLWLSNNTPFKTGVALRGGVPICWPWFGPAAQQGLPSHGFARNLP
+ WALKAHNEDDHGVMLTFELQSSDATRKYWPHDFTLLARFKVGKTCEIELEAHGEFETT
+ SALHSYFNIGDIANVQVSGLGDRFIDKVNDAKEGVLTDGVQTFPSRTDRVYLNPEACS
+ VIHDATLRRTIDVVHHHQINVVGWNPGPALSASMGDMPDDGYKTFVCVETAYATAPQY
+ ATEEKPSRLAQTICVAQR"
+ misc_feature 1630500..1631282
+ /locus_tag="SARI_01691"
+ /note="D-hexose-6-phosphate epimerase-like; Region:
+ D-hex-6-P-epi_like; cd09020"
+ /db_xref="CDD:185697"
+ misc_feature order(1630635..1630637,1630698..1630700,1630710..1630712,
+ 1630905..1630907,1630911..1630913,1631037..1631039,
+ 1631139..1631141,1631214..1631216)
+ /locus_tag="SARI_01691"
+ /note="active site"
+ /db_xref="CDD:185697"
+ misc_feature order(1630635..1630637,1630710..1630712)
+ /locus_tag="SARI_01691"
+ /note="phosphate binding residues; other site"
+ /db_xref="CDD:185697"
+ misc_feature order(1630905..1630907,1631214..1631216)
+ /locus_tag="SARI_01691"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:185697"
+ gene complement(1631418..1632275)
+ /locus_tag="SARI_01692"
+ CDS complement(1631418..1632275)
+ /locus_tag="SARI_01692"
+ /inference="protein motif:BlastProDom:IPR001395"
+ /inference="protein motif:FPrintScan:IPR001395"
+ /inference="protein motif:Gene3D:IPR001395"
+ /inference="protein motif:HMMPanther:IPR001395"
+ /inference="protein motif:HMMPfam:IPR001395"
+ /inference="similar to AA sequence:INSD:AAV77489.1"
+ /note="'KEGG: reh:H16_A3186 2.0e-78 aldehyde reductase,
+ related to diketogulonate reductase K00011;
+ COG: COG0656 Aldo/keto reductases, related to
+ diketogulonate reductase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570725.1"
+ /db_xref="GI:161503613"
+ /db_xref="InterPro:IPR001395"
+ /translation="MRTVKNVTFCGQATLPAIGQGTWYMGERADNRQREVAALRAGLD
+ LGLRLIDTAEMYADGGAEKVVGEALAGRRDEAYLVSKVYPWNAGGQKMIAACEGSLRR
+ LKTDYLDLYLLHWAGSFSFEETIEGMERLMAQGKIRRWGVSNLDYDDMQALWRTPGGQ
+ QCATNQVLYHLASRGIEYDLLPWCQQQRMPVMAYSPLAQAGRLRSGLLNHPVVNEIAQ
+ AHNATGAQILLAWVIAHPGVVAIPKAGSAEHVKQNAAALEIALSANEIALLDSAWPAP
+ KGKTALDMV"
+ misc_feature complement(1631460..1632236)
+ /locus_tag="SARI_01692"
+ /note="Aldo-keto reductases (AKRs) are a superfamily of
+ soluble NAD(P)(H) oxidoreductases whose chief purpose is
+ to reduce aldehydes and ketones to primary and secondary
+ alcohols. AKRs are present in all phyla and are of
+ importance to both health and industrial...; Region:
+ Aldo_ket_red; cd06660"
+ /db_xref="CDD:119408"
+ misc_feature complement(1631454..1632227)
+ /locus_tag="SARI_01692"
+ /note="Aldo/keto reductase family; Region: Aldo_ket_red;
+ pfam00248"
+ /db_xref="CDD:215817"
+ misc_feature complement(order(1631517..1631522,1631529..1631531,
+ 1631544..1631555,1631601..1631603,1631679..1631696,
+ 1631778..1631780,1631844..1631849,1631931..1631936,
+ 1632033..1632035,1632108..1632110,1632123..1632125,
+ 1632207..1632215))
+ /locus_tag="SARI_01692"
+ /note="active site"
+ /db_xref="CDD:119408"
+ misc_feature complement(order(1631934..1631936,1632033..1632035,
+ 1632108..1632110,1632123..1632125))
+ /locus_tag="SARI_01692"
+ /note="catalytic tetrad [active]"
+ /db_xref="CDD:119408"
+ gene complement(1632387..1633143)
+ /locus_tag="SARI_01693"
+ /note="Pseudogene compared to gi|16764638|ref|NP_460253.1|
+ arylsulfatase regulator [Salmonella typhimurium LT2]"
+ gene complement(1633431..1634177)
+ /locus_tag="SARI_01694"
+ CDS complement(1633431..1634177)
+ /locus_tag="SARI_01694"
+ /inference="protein motif:HMMPfam:IPR010583"
+ /inference="similar to AA sequence:REFSEQ:YP_216285.1"
+ /note="'COG: COG3713 Outer membrane protein V;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="MltA-interacting protein MipA"
+ /protein_id="YP_001570726.2"
+ /db_xref="GI:448236235"
+ /db_xref="InterPro:IPR010583"
+ /translation="MTKLKLLALGVLIATSASVAHAESNLTLGAGVGVVEHPYKDYDS
+ DVYPIPVIAYESENFWFRGLGGGYYLWNDNTDKLSIMAYWSPMYFKPGDSDDHQLRRL
+ DRRKSTMMAGVSYAHHTQYGFLRTSLAGDTLDNSNGIVWDLAWLYRYTNGGLTLTPGI
+ GVEWNSENQNDYYYGVSRKESSRSGLRGYNPNDSWNPYLEFSANYNFAGNWSVYGTAR
+ YTRLSDEITDSPMVDKSWTGILSTGVTYRF"
+ misc_feature complement(1633434..1634168)
+ /locus_tag="SARI_01694"
+ /note="Outer membrane protein V [Cell envelope biogenesis,
+ outer membrane]; Region: OmpV; COG3713"
+ /db_xref="CDD:226236"
+ gene 1634572..1636536
+ /locus_tag="SARI_01695"
+ CDS 1634572..1636536
+ /locus_tag="SARI_01695"
+ /inference="protein motif:HMMPfam:IPR010650"
+ /inference="protein motif:HMMPfam:IPR013153"
+ /inference="protein motif:HMMSmart:IPR013153"
+ /note="'KEGG: eci:UTI89_C1979 0. yeaG; hypothetical
+ protein K07180;
+ COG: COG2766 Putative Ser protein kinase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570727.1"
+ /db_xref="GI:161503615"
+ /db_xref="InterPro:IPR010650"
+ /db_xref="InterPro:IPR013153"
+ /translation="MCEKTKGWHIMNIFDHYRQRYEAAKDEEFTLQDFLTICRQDRSA
+ YANAAERLLMAIGEPSMVDTAQEPRLSRLFSNRVIARYPAFEEFYGMEDAIEQIVSYL
+ KHAAQGLEEKKQILYLLGPVGGGKSSLAERLKSLMQRVPIYVLSANGERSPVNDHPLC
+ LFNPQEDAQILEKEYGIPRRYLGTIMSPWAAKRLHEFGGDITKFRVVKVWPSILEQIA
+ IAKTEPGDENNQDISALVGKVDIRKLEHHAQNDPDAYGYSGALCRANQGIMEFVEMFK
+ APIKVLHPLLTATQEGNYNGTEGISALPFNGIILAHSNESEWVTFRNNKNNEAFLDRV
+ YIVKVPYCLRISEEIKIYEKLLNHSELAHAPCAPGTLETLSRFSILSRLKEPENSSIY
+ SKMRVYDGESLKDTDPKAKSYQEYRDYAGVDEGMNGLSTRFAFKILSRVFNFDHAEVA
+ ANPVHLFYVLEQQIEREQFPQEQAERYLEFLKGYLIPKYAEFIGKEIQTAYLESYSEY
+ GQNIFDRYVTYADFWIQDQEYRDPDTGQLFDRESLNAELEKIEKPAGISNPKDFRNEI
+ VNFVLRARANNSGRNPNWTSYEKLRTVIEKKMFSNTEELLPVISFNAKTSTDEQKKHD
+ DFVDRMMEKGYTRKQVRLLCEWYLRVRKSS"
+ misc_feature 1634602..1636533
+ /locus_tag="SARI_01695"
+ /note="PrkA family serine protein kinase; Provisional;
+ Region: PRK15455"
+ /db_xref="CDD:185352"
+ misc_feature 1634830..>1634976
+ /locus_tag="SARI_01695"
+ /note="AAA ATPase domain; Region: AAA_16; pfam13191"
+ /db_xref="CDD:221970"
+ misc_feature 1634929..1634952
+ /locus_tag="SARI_01695"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature 1634932..1634955
+ /locus_tag="SARI_01695"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:99707"
+ misc_feature 1635745..1636509
+ /locus_tag="SARI_01695"
+ /note="PrkA serine protein kinase C-terminal domain;
+ Region: PrkA; pfam06798"
+ /db_xref="CDD:219180"
+ gene 1636659..1637939
+ /locus_tag="SARI_01696"
+ CDS 1636659..1637939
+ /locus_tag="SARI_01696"
+ /inference="protein motif:HMMPfam:IPR006698"
+ /inference="similar to AA sequence:SwissProt:Q8ZPW3"
+ /note="'KEGG: eci:UTI89_C1980 1.1e-214 yeaH; hypothetical
+ protein YeaH K00754;
+ COG: COG2718 Uncharacterized conserved protein;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570728.1"
+ /db_xref="GI:161503616"
+ /db_xref="InterPro:IPR006698"
+ /translation="MTWFIDRRLNGKNKSTVNRQRFLRRYKAQIKQSISEAINKRSVT
+ DVDSGESVSIPTDDISEPMFHQGRGGLRHRVHPGNDHFIQNDRIERPQDGGGSGSGNG
+ QASQDGEGQDEFVFQISKDEYLDLLFEDLALPNLKKNQHRQLNEYKTHRAGFTSNGVP
+ ANISVVRSLQNSLARRTAMTAGKRRELHALEAELETLSSSEPAQLLEEERLRREIAEL
+ RAKIEKVPFIDTFDLRYKNYEKRPDPSSQAVMFCLMDVSGSMDQATKDMAKRFYILLY
+ LFLSRTYKNVEVVYIRHHTQAKEVDEHEFFYSQETGGTIVSSALKLMDEVVKERYDPG
+ QWNIYAAQASDGDNWADDSPLCHEILAKKLLPVVRYYSYIEITRRAHQTLWREYEHLQ
+ AMFDNFAMQHIRDQDDIYPVFRELFQKQSANQSA"
+ misc_feature 1636698..1637930
+ /locus_tag="SARI_01696"
+ /note="hypothetical protein; Provisional; Region:
+ PRK05325"
+ /db_xref="CDD:235409"
+ gene 1638585..1640075
+ /locus_tag="SARI_01697"
+ CDS 1638585..1640075
+ /locus_tag="SARI_01697"
+ /inference="protein motif:HMMPfam:IPR000160"
+ /inference="protein motif:HMMSmart:IPR000160"
+ /inference="protein motif:HMMTigr:IPR000160"
+ /inference="similar to AA sequence:REFSEQ:YP_216282.1"
+ /note="'KEGG: eci:UTI89_C1612 2.6e-13 ydaM; hypothetical
+ protein YdaM;
+ COG: COG2199 FOG: GGDEF domain;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570729.1"
+ /db_xref="GI:161503617"
+ /db_xref="InterPro:IPR000160"
+ /translation="MNLHHKALRHFISASVIVLTSSFLIYELIASDRAMNAYMRYIME
+ RADSSFLYDKYQNQSIAAHLMRTFEAPGEPVTTEKRRAFCDAFETVNGTHGVNLIRHN
+ YPALHGTLQTAATQCTDNIDDVFLLPAFDQAVSINRAQDDHSHGLGTLEIKFRYYVDL
+ KKHYVYFYDLINSQRFAMHRWTFLQKGTMGINRKDIDKLFTGRTVISSIYMDDITQEN
+ VMSFLTPVYLSGTLKGIVMVDVNQDNLKNIFYTQDRPLVWRYLNITLKDLGSGKEIII
+ NKSKNNLFQYVNYNHDIPGGLRVSFSLDLTYFIVSSWKALAFYLLATALLLNMVRMHF
+ RLYRDVTRENISDAMTGLYNRKILTPVLEQRLQRLVNTGTPVTFIAIDCDKLKLINDT
+ LGHQEGDRIITLLAKAIKTSIRKSDYAIRLGGDEFCIILVDYAADLAIHLPERIIRSL
+ QIIAPDKSVHFSAGIYNMQPNDTINDAYQASDAQLYLNKQQKQRRS"
+ misc_feature 1639569..1640069
+ /locus_tag="SARI_01697"
+ /note="c-di-GMP synthetase (diguanylate cyclase, GGDEF
+ domain) [Signal transduction mechanisms]; Region:
+ COG2199"
+ /db_xref="CDD:225109"
+ misc_feature 1639623..1640069
+ /locus_tag="SARI_01697"
+ /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region:
+ GGDEF; cd01949"
+ /db_xref="CDD:143635"
+ misc_feature order(1639728..1639730,1639857..1639859)
+ /locus_tag="SARI_01697"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:143635"
+ misc_feature order(1639743..1639745,1639752..1639757,1639767..1639769,
+ 1639779..1639781,1639845..1639847,1639851..1639862)
+ /locus_tag="SARI_01697"
+ /note="active site"
+ /db_xref="CDD:143635"
+ misc_feature order(1639833..1639835,1639917..1639919)
+ /locus_tag="SARI_01697"
+ /note="I-site; other site"
+ /db_xref="CDD:143635"
+ gene 1640125..1640652
+ /locus_tag="SARI_01698"
+ CDS 1640125..1640652
+ /locus_tag="SARI_01698"
+ /inference="protein motif:HMMPfam:IPR007214"
+ /inference="similar to AA sequence:REFSEQ:YP_150806.1"
+ /note="'COG: COG2606 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570730.1"
+ /db_xref="GI:161503618"
+ /db_xref="InterPro:IPR007214"
+ /translation="MTEMTEVAKGVATHQRLVALLTQENARYRVVSHEAVGKCEAVSE
+ IRGTALGQGAKALVCKVKGNGLNQHVLAILAADQQADLSQLALHLGGLRASLASPAEV
+ DMLTGCVFGAIPPFSFHPNLKLVADPLLFERFDEIAFNAGLLEKSVIMNTQDYLRIAR
+ PELATFRRAQSSPTS"
+ misc_feature 1640164..1640625
+ /locus_tag="SARI_01698"
+ /note="YeaK is an uncharacterized Echerichia coli protein
+ with a YbaK-like domain of unknown function. The
+ YbaK-like domain family includes the INS amino
+ acid-editing domain of the bacterial class II prolyl tRNA
+ synthetase (ProRS), and it's trans-acting...; Region:
+ YeaK; cd04336"
+ /db_xref="CDD:239828"
+ misc_feature order(1640287..1640289,1640455..1640460,1640542..1640544)
+ /locus_tag="SARI_01698"
+ /note="putative deacylase active site [active]"
+ /db_xref="CDD:239828"
+ gene 1640929..1641405
+ /locus_tag="SARI_01699"
+ CDS 1640929..1641405
+ /locus_tag="SARI_01699"
+ /inference="protein motif:HMMPfam:IPR007382"
+ /inference="similar to AA sequence:INSD:AAV77496.1"
+ /note="'COG: COG2707 Predicted membrane protein;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570731.1"
+ /db_xref="GI:161503619"
+ /db_xref="InterPro:IPR007382"
+ /translation="MGLLFGKETIMFDVTLLILLGLAALGFISHNTTVAVSILVLIIV
+ RVTPLNTFFPWIEKQGLTVGIIILTIGVMAPIASGTLPSSTLLHSFENWKSLVAIAVG
+ VFVSWLGGRGVALMGNQPQLVAGLLVGTVLGVALFRGVPVGPLIAAGLVSLIVGRQ"
+ misc_feature 1640959..1641402
+ /locus_tag="SARI_01699"
+ /note="Predicted membrane protein [Function unknown];
+ Region: COG2707"
+ /db_xref="CDD:225334"
+ gene complement(1641406..1642179)
+ /locus_tag="SARI_01700"
+ CDS complement(1641406..1642179)
+ /locus_tag="SARI_01700"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR000005"
+ /inference="protein motif:HMMSmart:IPR000005"
+ /inference="protein motif:ScanRegExp:IPR000005"
+ /inference="protein motif:superfamily:IPR011051"
+ /inference="similar to AA sequence:REFSEQ:YP_150809.1"
+ /note="'KEGG: rfe:RF_0915 0.0075
+ methylated-DNA--protein-cysteine methyltransferase
+ K00567;
+ COG: COG2207 AraC-type DNA-binding domain-containing
+ proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570732.1"
+ /db_xref="GI:161503620"
+ /db_xref="InterPro:IPR000005"
+ /db_xref="InterPro:IPR011051"
+ /db_xref="InterPro:IPR012287"
+ /translation="MIGLRLDGYDPDLHYDAAVAFCIRARDDELFSPRHLHRKGQLIL
+ ALHGAITCEVENAMWMVPPQYAVWLPGSLPHSNHVTAGAELCFLFIEPTAVVMPERCC
+ TLKISPLCRELILSLARRTDLERTQMPTQRLIQVLFDELPQQPQEQLQLPVSAHPKIR
+ QMVETMALEPARWNTLGQWASVFAMSERNLARLVVKETGLSFRRWRHQLQLILALQAL
+ IAGRNVQQTAHMLGYDSTSAFITMFKKGLGQTLGQYLTG"
+ misc_feature complement(1641445..1641720)
+ /locus_tag="SARI_01700"
+ /note="AraC-type DNA-binding domain-containing proteins
+ [Transcription]; Region: AraC; COG2207"
+ /db_xref="CDD:225117"
+ gene 1642280..1643464
+ /locus_tag="SARI_01701"
+ CDS 1642280..1643464
+ /locus_tag="SARI_01701"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="protein motif:HMMTigr:IPR004747"
+ /inference="similar to AA sequence:REFSEQ:NP_460244.1"
+ /note="'KEGG: dre:30298 5.1e-05 jak2b; Janus kinase 2b
+ K04447;
+ COG: COG2807 Cyanate permease;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570733.1"
+ /db_xref="GI:161503621"
+ /db_xref="InterPro:IPR004747"
+ /db_xref="InterPro:IPR011701"
+ /translation="MTTALSLRGKQGAFLIAGILMIATTLRVTFTGAAPLLETIRADY
+ GLSTAQTGLLTTLPLLAFAMVSPLAAGLARRFGMERSLFAAMLLICAGIALRSLPSAA
+ LLFVGTTIIGCGIALGNVLLPGLIKRDFSQHVARLTGAYSLTMGAAAALGSALVVPLA
+ LHGFGWRGALLMLMLFPLFAFLIWLPQWRTTRAANLSSSRALHERGVWRSPLAWQVTL
+ FLGLNSLIYYVIIGWVPTILISHGYSEAQAGSLHGLLQLATAAPGLAIPLILHRLNDQ
+ RWIAALVSLLCATGAAGLWFAPDQALIWTLLFGFGSGATMILGLTFIGLRASSAHQAA
+ ALSGMAQSVGYLLAACGPPVMGKLHDVSGSWYLPLSGVAVLAIVMAIFGLYAGREREI
+ AS"
+ misc_feature 1642286..1643461
+ /locus_tag="SARI_01701"
+ /note="Cyanate permease [Inorganic ion transport and
+ metabolism]; Region: CynX; COG2807"
+ /db_xref="CDD:225365"
+ misc_feature 1642325..1643434
+ /locus_tag="SARI_01701"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature order(1642367..1642369,1642376..1642384,1642388..1642393,
+ 1642442..1642444,1642451..1642456,1642463..1642465,
+ 1642475..1642480,1642484..1642489,1642622..1642627,
+ 1642634..1642639,1642646..1642651,1642658..1642660,
+ 1642694..1642699,1642706..1642711,1642727..1642729,
+ 1642949..1642951,1642958..1642963,1642970..1642975,
+ 1642982..1642984,1643021..1643023,1643033..1643035,
+ 1643045..1643047,1643054..1643056,1643066..1643068,
+ 1643204..1643206,1643213..1643218,1643225..1643227,
+ 1643237..1643242,1643252..1643254,1643285..1643290,
+ 1643297..1643302,1643309..1643314,1643321..1643323)
+ /locus_tag="SARI_01701"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene 1643646..1643993
+ /locus_tag="SARI_01702"
+ CDS 1643646..1643993
+ /locus_tag="SARI_01702"
+ /inference="protein motif:HMMPfam:IPR007438"
+ /inference="similar to AA sequence:REFSEQ:NP_456232.1"
+ /note="'KEGG: eci:UTI89_C1988 4.5e-42 yeaO; hypothetical
+ protein K00589;
+ COG: COG3189 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570734.1"
+ /db_xref="GI:161503622"
+ /db_xref="InterPro:IPR007438"
+ /translation="MLIQCKRVYFPAEKNDGYRVLVDRLWPRGIKKTALIYDEWNKAI
+ APSPELRKAFHSELIDFNHFAQQYRAELAQQPEESKRLADIARQQPLTLLYAAKNARQ
+ NHAIVLAEWLRTL"
+ misc_feature 1643652..1643990
+ /locus_tag="SARI_01702"
+ /note="Uncharacterized conserved protein [Function
+ unknown]; Region: COG3189"
+ /db_xref="CDD:225730"
+ gene complement(1643979..1644290)
+ /locus_tag="SARI_01703"
+ CDS complement(1643979..1644290)
+ /locus_tag="SARI_01703"
+ /inference="similar to AA sequence:INSD:CAD02077.1"
+ /note="'COG: NOG29442 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570735.1"
+ /db_xref="GI:161503623"
+ /translation="MFQLKPGALAIVIGAKTPAGRRNIGKSVELFCLCQPGDKFINPV
+ NGHVTLLPKEAPRSLWLVTGDVASADSQHGFAWVRTEHLIPLSPDRQPGRAAVRQLQR
+ S"
+ gene complement(1644359..1644610)
+ /locus_tag="SARI_01704"
+ CDS complement(1644359..1644610)
+ /locus_tag="SARI_01704"
+ /inference="protein motif:HMMPfam:IPR005590"
+ /inference="similar to AA sequence:REFSEQ:YP_216273.1"
+ /note="'COG: COG3042 Putative hemolysin;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570736.2"
+ /db_xref="GI:448236236"
+ /db_xref="InterPro:IPR005590"
+ /translation="MKFMWIALPGVLLLSACSSSQPDASRQSRIGMPNPAAVYCEQQG
+ GTLAPVQTPQGVRSDCKLPNGEVIDEWTLWRRDHSNTKK"
+ misc_feature complement(1644374..1644610)
+ /locus_tag="SARI_01704"
+ /note="Putative hemolysin [General function prediction
+ only]; Region: Hlx; COG3042"
+ /db_xref="CDD:225584"
+ misc_feature complement(1644377..1644523)
+ /locus_tag="SARI_01704"
+ /note="Domain of unknown function (DUF333); Region:
+ DUF333; pfam03891"
+ /db_xref="CDD:202798"
+ gene 1644711..1644905
+ /locus_tag="SARI_01706"
+ CDS 1644711..1644905
+ /locus_tag="SARI_01706"
+ /note="'Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570738.1"
+ /db_xref="GI:161503626"
+ /translation="MSGNNGLPQNIWPFVVKGTLLFWRPLNSEGNSMRVGILFPIVIF
+ ITAILFLAWFFIGGYAAPGA"
+ unsure 1645027..1645089
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(1645044..1645292)
+ /locus_tag="SARI_01707"
+ CDS complement(1645044..1645292)
+ /locus_tag="SARI_01707"
+ /inference="protein motif:HMMPfam:IPR007341"
+ /inference="similar to AA sequence:INSD:AAL20199.1"
+ /note="'KEGG: bja:bll5026 0.0049 rrpP; H+ translocating
+ pyrophosphate synthase K01507;
+ COG: COG2261 Predicted membrane protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570739.1"
+ /db_xref="GI:161503627"
+ /db_xref="InterPro:IPR007341"
+ /translation="MGILSWIIFGLIAGILAKWIMPGKDGGGFFMTIILGIVGAVVGG
+ WISTLFGFGKVDGFNFGSFAVAVIGAIVVLLIYRKIKS"
+ misc_feature complement(1645047..1645292)
+ /locus_tag="SARI_01707"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10457"
+ /db_xref="CDD:182475"
+ gene 1645472..1645556
+ /locus_tag="SARI_01708"
+ misc_RNA 1645472..1645556
+ /locus_tag="SARI_01708"
+ /product="RyhB RNA"
+ /inference="nucleotide motif:Rfam:RF00057"
+ /note="Rfam score 54.37"
+ gene complement(1645601..1646242)
+ /locus_tag="SARI_01709"
+ CDS complement(1645601..1646242)
+ /locus_tag="SARI_01709"
+ /inference="similar to AA sequence:INSD:AAL20198.1"
+ /note="'COG: NOG24806 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570740.1"
+ /db_xref="GI:161503628"
+ /translation="MKLDTQLTLSALILALAAVVIPFAADWQLPLLNGVVVRWIENAQ
+ ALWLLFGALFTAWYIRPFSRPEGAKQFWLWAVVWWMVLLGRSTSWGRDYFPGEPRIVF
+ RTISVLLIAALVLPVLLSVGLRKEIVRRLRNVPLPLWLFAVTACSYLISDTVEHHRLL
+ SPIFLHNAHYTDLIEELYEVPFMIGLFMVTVGFMQQDKQDEDTTLEMTPYHAK"
+ gene complement(1646616..1647014)
+ /locus_tag="SARI_01710"
+ CDS complement(1646616..1647014)
+ /locus_tag="SARI_01710"
+ /inference="similar to AA sequence:INSD:CAD02084.1"
+ /note="'COG: COG3615 Uncharacterized protein/domain,
+ possibly involved in tellurite resistance;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570741.1"
+ /db_xref="GI:161503629"
+ /translation="MLQIPQNHIHTRSTPFWNKKTAPAGIFERHLDKGTRPGVYPRLS
+ VMQGAVKYLGYADEHSSEPEDIMVINAGEFGVFPPQKWHNIEVMTDDTYFNIDFFVAP
+ EVLMEGANPRKVIPGENNDEKSHLYRHGNE"
+ misc_feature complement(1646706..1647014)
+ /locus_tag="SARI_01710"
+ /note="Uncharacterized protein/domain, possibly involved
+ in tellurite resistance [Inorganic ion transport and
+ metabolism]; Region: TehB; COG3615"
+ /db_xref="CDD:226142"
+ unsure 1646974..1647111
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(1647187..1647885)
+ /locus_tag="SARI_01711"
+ CDS complement(1647187..1647885)
+ /locus_tag="SARI_01711"
+ /inference="protein motif:HMMPfam:IPR001123"
+ /inference="similar to AA sequence:INSD:AAX65186.1"
+ /note="'COG: COG1280 Putative threonine efflux protein;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="leucine export protein LeuE"
+ /protein_id="YP_001570742.1"
+ /db_xref="GI:161503630"
+ /db_xref="InterPro:IPR001123"
+ /translation="MHSLAYCFAVKRKFFQEEVNVFAEYGVLNYWTYLVGAIFIVLVP
+ GPNTLFVLKNSVGRGVKGGYLAACGVFIGDAVLMFLAYAGVATLIKTTPILFNIVRYL
+ GAFYLLYLGAKILYATLASKGRATADTVVPFGAIFKRALILSLTNPKAILFYVSFFVQ
+ FIDVNAPNTGMSFFILAITLEIVSFYYLSFLILSGAFVTHYIGTKKKLAKVGNSLIGL
+ LFVGFAARLATLQS"
+ misc_feature complement(1647190..1647825)
+ /locus_tag="SARI_01711"
+ /note="leucine export protein LeuE; Provisional; Region:
+ PRK10958"
+ /db_xref="CDD:236807"
+ gene complement(1647921..1648703)
+ /locus_tag="SARI_01712"
+ CDS complement(1647921..1648703)
+ /locus_tag="SARI_01712"
+ /inference="protein motif:HMMPfam:IPR001638"
+ /inference="protein motif:HMMSmart:IPR001638"
+ /inference="similar to AA sequence:REFSEQ:YP_048938.1"
+ /note="'KEGG: bur:Bcep18194_A3548 6.5e-18 ABC amino acid
+ transporter, periplasmic ligand binding protein
+ K02030:K02424;
+ COG: COG0834 ABC-type amino acid transport/signal
+ transduction systems, periplasmic component/domain;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570743.1"
+ /db_xref="GI:161503631"
+ /db_xref="InterPro:IPR001638"
+ /translation="MFRKVRILTMTGLFLLATAGHAEPKVLRVGVDLTNPPLQVRDQC
+ GNPTGFVIDITNALCQTINVKCHYVVNSFDAQIPELLARKVDFIMPLGVTPKRRASIA
+ FSRYVYHDPTVLVARKTVNILPQAARLKGKNIAVEQGSIQETWANTYWLPAGVVIKSY
+ PDMTSIYQDLVTGRLDGALCPAIALKFGFLQTAQGKAFEVKGSAVTDTHLFSIGSAYG
+ IRKEDEATQRLINQGLEQIKRNGVWLAIKERYFGDLDISVTE"
+ misc_feature complement(1647936..1648703)
+ /locus_tag="SARI_01712"
+ /note="histidine ABC transporter substrate-binding protein
+ HisJ; Provisional; Region: PRK15437"
+ /db_xref="CDD:185334"
+ misc_feature complement(1647951..1648625)
+ /locus_tag="SARI_01712"
+ /note="Bacterial periplasmic transport systems use
+ membrane-bound complexes and substrate-bound,
+ membrane-associated, periplasmic binding proteins (PBPs)
+ to transport a wide variety of substrates, such as, amino
+ acids, peptides, sugars, vitamins and inorganic...;
+ Region: PBPb; cd00134"
+ /db_xref="CDD:238078"
+ misc_feature complement(order(1648161..1648163,1648281..1648283,
+ 1648413..1648415,1648485..1648487,1648599..1648601))
+ /locus_tag="SARI_01712"
+ /note="substrate binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:238078"
+ misc_feature complement(order(1648182..1648184,1648200..1648202,
+ 1648212..1648214))
+ /locus_tag="SARI_01712"
+ /note="membrane-bound complex binding site; other site"
+ /db_xref="CDD:238078"
+ misc_feature complement(1648056..1648073)
+ /locus_tag="SARI_01712"
+ /note="hinge residues; other site"
+ /db_xref="CDD:238078"
+ gene complement(1648726..1649271)
+ /locus_tag="SARI_01713"
+ CDS complement(1648726..1649271)
+ /locus_tag="SARI_01713"
+ /inference="protein motif:HMMPfam:IPR002701"
+ /inference="protein motif:HMMPIR:IPR012279"
+ /inference="protein motif:HMMTigr:IPR008240"
+ /inference="protein motif:superfamily:IPR002701"
+ /inference="similar to AA sequence:REFSEQ:YP_150820.1"
+ /note="catalyzes the interconversion of chorismate to
+ prephenate"
+ /codon_start=1
+ /transl_table=11
+ /product="chorismate mutase"
+ /protein_id="YP_001570744.2"
+ /db_xref="GI:448236237"
+ /db_xref="InterPro:IPR002701"
+ /db_xref="InterPro:IPR008240"
+ /db_xref="InterPro:IPR012279"
+ /translation="MIRYIAVFLCSLLMCSSTFADSVTSVSLGALSTVLNERMLLMKE
+ VAAYKMKHHLPIDDFVREQNVFAEAEKEAKNNGLDPYSIIPFISSLMEASKAIQYRYL
+ AQWRTGPEPSFPIQTLSVSRQRIRQLDNQLVIIISQRLMVGAFSHEDMVWLRAQFNAP
+ NLNESDISDVLAALSLVRRAR"
+ misc_feature complement(1648729..1649268)
+ /locus_tag="SARI_01713"
+ /note="chorismate mutase; Provisional; Region: PRK08055"
+ /db_xref="CDD:236143"
+ gene 1649587..1649835
+ /locus_tag="SARI_01714"
+ CDS 1649587..1649835
+ /locus_tag="SARI_01714"
+ /inference="similar to AA sequence:INSD:AAV77510.1"
+ /note="'COG: NOG23111 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570745.1"
+ /db_xref="GI:161503633"
+ /translation="MTTITLVNEQNSTGNPFSAHMLCEQRAIQEITYELLQSQQHVSN
+ KDIIAKLIEKLETEKDVVQLDIYRNALEAVLFQTPDDI"
+ misc_feature <1649593..1649700
+ /locus_tag="SARI_01714"
+ /note="Pleckstrin homology-like domain; Region: PH-like;
+ cl17171"
+ /db_xref="CDD:247725"
+ misc_feature 1649650..1649829
+ /locus_tag="SARI_01714"
+ /note="Biofilm development protein YmgB/AriR; Region:
+ YmgB; pfam10798"
+ /db_xref="CDD:151248"
+ gene complement(1649797..1649967)
+ /locus_tag="SARI_01715"
+ CDS complement(1649797..1649967)
+ /locus_tag="SARI_01715"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570746.1"
+ /db_xref="GI:161503634"
+ /translation="MTCQGECGMSRRKLIQKVMKNQAQNVDASSLLTKKGGLNPPLFI
+ LDVVRRLKQNGF"
+ gene complement(1649888..1650736)
+ /locus_tag="SARI_01716"
+ CDS complement(1649888..1650736)
+ /locus_tag="SARI_01716"
+ /inference="protein motif:HMMPfam:IPR000551"
+ /inference="protein motif:HMMSmart:IPR000551"
+ /inference="protein motif:ScanRegExp:IPR000551"
+ /inference="protein motif:superfamily:IPR009061"
+ /inference="similar to AA sequence:REFSEQ:NP_460232.1"
+ /note="'COG: COG0789 Predicted transcriptional regulators;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative transcriptional regulator"
+ /protein_id="YP_001570747.1"
+ /db_xref="GI:161503635"
+ /db_xref="InterPro:IPR000551"
+ /db_xref="InterPro:IPR009061"
+ /translation="MATFSISAMAAQCGVTTANIRSWERYGLLEPVKDEAGNRFYCIE
+ DAIRIQHIIDALSKGFSLKEIKPALYGEEMHCRSGWLFYQEEILAQCRKFEPAKLRKL
+ LWRYGREIPPGIVIESILRPLRLWLSAGDDDARRFEKALLDTAIIEYATFQLSSVRKA
+ PAGTMLIAAFSLNDPVELWLETIKYCSEGMRVEVIPWQAPMPDLLSTSFGHIVLWHDE
+ ALTPAQENLIQDLKESGKFSLQVKNGPGLTLLPAVYRQHDMPGRVRHVPPQTHSEGYE
+ KSGTER"
+ misc_feature complement(1650032..1650736)
+ /locus_tag="SARI_01716"
+ /note="transcriptional regulator MirA; Provisional;
+ Region: PRK15043"
+ /db_xref="CDD:185003"
+ misc_feature complement(1650431..1650727)
+ /locus_tag="SARI_01716"
+ /note="Helix-Turn-Helix DNA binding domain of MerR-like
+ transcription regulators; Region: HTH_MerR-like; cd00592"
+ /db_xref="CDD:133378"
+ misc_feature complement(order(1650620..1650628,1650674..1650676,
+ 1650716..1650724))
+ /locus_tag="SARI_01716"
+ /note="DNA binding residues [nucleotide binding]"
+ /db_xref="CDD:133378"
+ misc_feature complement(order(1650431..1650433,1650443..1650445,
+ 1650461..1650463,1650473..1650475,1650533..1650535,
+ 1650560..1650565,1650575..1650577,1650584..1650586))
+ /locus_tag="SARI_01716"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:133378"
+ unsure 1650484..1650740
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(1650805..1651452)
+ /locus_tag="SARI_01717"
+ CDS complement(1650805..1651452)
+ /locus_tag="SARI_01717"
+ /inference="protein motif:BlastProDom:IPR000792"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000792"
+ /inference="protein motif:HMMSmart:IPR000792"
+ /inference="similar to AA sequence:INSD:CAC48228.1"
+ /note="'COG: COG2771 DNA-binding HTH domain-containing
+ proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570748.1"
+ /db_xref="GI:161503636"
+ /db_xref="InterPro:IPR000792"
+ /db_xref="InterPro:IPR011991"
+ /translation="MRAIEWTFPHGYRFVEVDMTGSATSVLKTVTRLLSENLFLNYGL
+ ESLFKDVAIIVGNVNYIIFDIDDYYTIQQYITTTFKTVLIGVVTHNEYNFIDEYHAIY
+ RIKSDASIAEWRDLLILAGSGQVIPRTQKFRLTANEKKVLAMLIKGMDIRQISCELNV
+ HLKTIYSVRYHVLAKLGCRTVLDYQILSVSKLFTHWITINSASNIISHVNSEVIA"
+ misc_feature complement(1650913..1651053)
+ /locus_tag="SARI_01717"
+ /note="C-terminal DNA-binding domain of LuxR-like
+ proteins. This domain contains a helix-turn-helix motif
+ and binds DNA. Proteins belonging to this group are
+ response regulators; some act as transcriptional
+ activators, others as transcriptional repressors. Many...;
+ Region: LuxR_C_like; cd06170"
+ /db_xref="CDD:99777"
+ misc_feature complement(order(1650943..1650957,1650961..1650966,
+ 1650970..1650975,1650997..1651005,1651042..1651050))
+ /locus_tag="SARI_01717"
+ /note="DNA binding residues [nucleotide binding]"
+ /db_xref="CDD:99777"
+ unsure 1651118..1652073
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(1651552..1651881)
+ /locus_tag="SARI_01718"
+ CDS complement(1651552..1651881)
+ /locus_tag="SARI_01718"
+ /inference="similar to AA sequence:INSD:AAL20189.1"
+ /note="'KEGG: stm:STM1264 1.3e-21 aadA; Aminoglycoside
+ adenyltransferase K00984;
+ COG: COG1708 Predicted nucleotidyltransferases;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570749.1"
+ /db_xref="GI:161503637"
+ /translation="MTKCCTTKCNRCIKARYSQRAFFCCDVIILDTKIKRYLQPRATV
+ ALSVPPSIQRRADATADWLLPQPEDYAATLRAAEREYLGLEKKDWHILLPEVVRFVDF
+ AKAHIPT"
+ misc_feature complement(1651561..>1651713)
+ /locus_tag="SARI_01718"
+ /note="Domain of unknown function (DUF4111); Region:
+ DUF4111; pfam13427"
+ /db_xref="CDD:205605"
+ gene complement(1651859..1652470)
+ /locus_tag="SARI_01719"
+ CDS complement(1651859..1652470)
+ /locus_tag="SARI_01719"
+ /inference="similar to AA sequence:INSD:CAD02092.1"
+ /note="'COG: COG3443 Predicted periplasmic or secreted
+ protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570750.1"
+ /db_xref="GI:161503638"
+ /translation="MLFVNSPAFAHGHHAHGAPMTEVEQKAAAGVFDDANVRDRALTD
+ WDGMWQSVYPYLVSGELDPVFRQKSKKDPGKTFEDIKAYYRKGYATNVETIGIENGVI
+ EFHRDNGVASCKYDYAGYKILTYTSGKKGVRYLFECKDANSKAPKYIQFSDHIIAPRK
+ SGHFHIFMGNTSQQALLQEMENWPTYYPYQLKTNEVVDEMLHH"
+ misc_feature complement(1651862..1652470)
+ /locus_tag="SARI_01719"
+ /note="zinc/cadmium-binding protein; Provisional; Region:
+ PRK10306"
+ /db_xref="CDD:182368"
+ gene complement(1652623..1652696)
+ /locus_tag="SARI_01720"
+ tRNA complement(1652623..1652696)
+ /locus_tag="SARI_01720"
+ /product="tRNA-Arg"
+ gene complement(1652705..1653031)
+ /locus_tag="SARI_01721"
+ CDS complement(1652705..1653031)
+ /locus_tag="SARI_01721"
+ /inference="protein motif:HMMPfam:IPR005560"
+ /inference="similar to AA sequence:INSD:AAV77515.1"
+ /note="'KEGG: mja:MJ0155 0.0015 formate dehydrogenase,
+ iron-sulfur subunit K00124;
+ COG: COG1145 Ferredoxin;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570751.1"
+ /db_xref="GI:161503639"
+ /db_xref="InterPro:IPR005560"
+ /translation="MQQEHRECIEQCYECAAACDVCASSCLREDNVGMMKHCIQLDMQ
+ CAAICRLAAQFMALESEYSQKVCRLCADICKACAEACARHDHDHCQNCARACSQCADA
+ CLKMTA"
+ misc_feature complement(1652714..1653019)
+ /locus_tag="SARI_01721"
+ /note="Cysteine-rich 4 helical bundle widely conserved in
+ bacteria; Region: DUF326; cd08026"
+ /db_xref="CDD:153434"
+ misc_feature complement(order(1652813..1652818,1652825..1652827,
+ 1652837..1652839,1652846..1652851,1652867..1652872,
+ 1652879..1652881,1652888..1652893,1652900..1652905,
+ 1652909..1652914))
+ /locus_tag="SARI_01721"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:153434"
+ gene 1653225..1654358
+ /locus_tag="SARI_01722"
+ CDS 1653225..1654358
+ /locus_tag="SARI_01722"
+ /inference="protein motif:HMMPfam:IPR006685"
+ /inference="protein motif:superfamily:IPR010920"
+ /inference="protein motif:superfamily:IPR011014"
+ /inference="protein motif:superfamily:IPR011066"
+ /inference="similar to AA sequence:INSD:AAO68799.1"
+ /note="'COG: COG0668 Small-conductance mechanosensitive
+ channel;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570752.1"
+ /db_xref="GI:161503640"
+ /db_xref="InterPro:IPR006685"
+ /db_xref="InterPro:IPR010920"
+ /db_xref="InterPro:IPR011014"
+ /db_xref="InterPro:IPR011066"
+ /translation="MEYLARLNIVTLLMSTTFWINLAVVFFVTLITYWLINWLLNVVY
+ KTLERPDKKDDAHGRLRSIIFEMLKKTSKMLIFFAAFLFSLRFVALPDRLFSTLSHAW
+ FLVVAIQMAIWLDQGVQSWMRHLLYAPGSNKNPVTLVILGMILRVLVWSMMLLSILAN
+ VGVDITALVASLGVGGIAIALAVQTVLSDVFASLSIGFDKPFEIGDFVVFNDVAGTIE
+ HIGLKTTRIRSLSGEQIVCANAQLLQQTIHNYKRMQTRRIVFTFGVATATPPEKLRLI
+ GDMVKKIITDVGETQFDRAHLLAFGQDRLTYEVVHIVNTADYNKYMDIQQEINIRIIE
+ KLIENDIELALPSLVVRAPVQVEETRDYSNTADAKNADKRVIQ"
+ misc_feature 1653525..1654277
+ /locus_tag="SARI_01722"
+ /note="Small-conductance mechanosensitive channel [Cell
+ envelope biogenesis, outer membrane]; Region: MscS;
+ COG0668"
+ /db_xref="CDD:223740"
+ misc_feature 1653654..1654253
+ /locus_tag="SARI_01722"
+ /note="Mechanosensitive ion channel; Region: MS_channel;
+ pfam00924"
+ /db_xref="CDD:201506"
+ gene complement(1654440..1655030)
+ /locus_tag="SARI_01723"
+ CDS complement(1654440..1655030)
+ /locus_tag="SARI_01723"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:REFSEQ:NP_460226.1"
+ /note="'KEGG: ava:Ava_B0212 9.6e-40 ABC transporter-like
+ K02032;
+ COG: COG1124 ABC-type dipeptide/oligopeptide/nickel
+ transport system, ATPase component;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570753.1"
+ /db_xref="GI:161503641"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MLSCRDLVIRQGGKVLWQNLTFTISAGERVGIHAPSGTGKTTLG
+ RVLAGWQKPTAGDVLLDGSPFPLHQYCPVQLVPQHPELTFNPWRSAGDAVRDAWQPDP
+ ETLRRLHVQPEWLTRRPMQLSGGELARIAILRALDPRTRFLIADEMTAQLDPSIQKAI
+ WVYVLEVCRSRSLGMLVISHQSALLDQVCTRHLQVE"
+ misc_feature complement(1654458..1655030)
+ /locus_tag="SARI_01723"
+ /note="ATP-binding cassette transporter nucleotide-binding
+ domain; Region: ABC_ATPase; cl17201"
+ /db_xref="CDD:247755"
+ misc_feature complement(1654491..1655030)
+ /locus_tag="SARI_01723"
+ /note="lipoprotein releasing system, ATP-binding protein;
+ Region: LolD_lipo_ex; TIGR02211"
+ /db_xref="CDD:131266"
+ misc_feature complement(1654908..1654931)
+ /locus_tag="SARI_01723"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(order(1654491..1654493,1654590..1654595,
+ 1654797..1654799,1654905..1654913,1654917..1654922))
+ /locus_tag="SARI_01723"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(1654797..1654808)
+ /locus_tag="SARI_01723"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(1654638..1654667)
+ /locus_tag="SARI_01723"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(1654590..1654607)
+ /locus_tag="SARI_01723"
+ /note="Walker B; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(1654572..1654583)
+ /locus_tag="SARI_01723"
+ /note="D-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(1654485..1654505)
+ /locus_tag="SARI_01723"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213179"
+ gene complement(1655024..1655821)
+ /locus_tag="SARI_01724"
+ CDS complement(1655024..1655821)
+ /locus_tag="SARI_01724"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="similar to AA sequence:REFSEQ:NP_460225.1"
+ /note="'KEGG: ava:Ava_B0213 6.6e-32 oligopeptide/dipeptide
+ ABC transporter, ATP-binding protein-like K02031;
+ COG: COG1123 ATPase components of various ABC-type
+ transport systems, contain duplicated ATPase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570754.1"
+ /db_xref="GI:161503642"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MLSLRQVTLESVRYRWYGARRWSALLQNVSFDIAPGEMVALVGG
+ SGEGKSLLLQCLLDLLPENLRFRGEIMLDGNRLDRHTIRQLRGNTFSYVPQGVQALNP
+ MLNIKKHLNRACYLTGRAWDEEQMVQLLQQSDLEPTVLERFPRQLSGGMAKRILACHA
+ SLSQARYILADEITAWLDTALANQLLEHLRGLCERGCGVLWVTHDLLLAARYADRIVV
+ LHQGHITDNIRCEQLQPEEMSEPLKRQWQALPELNPLFMPTGEGIEC"
+ misc_feature complement(1655150..1655821)
+ /locus_tag="SARI_01724"
+ /note="ATP-binding cassette domain of nickel/oligopeptides
+ specific transporters; Region: ABC_NikE_OppD_transporters;
+ cd03257"
+ /db_xref="CDD:213224"
+ misc_feature complement(1655123..1655749)
+ /locus_tag="SARI_01724"
+ /note="nickel import ATP-binding protein NikD; Region:
+ nickel_nikD; TIGR02770"
+ /db_xref="CDD:131817"
+ misc_feature complement(1655672..1655695)
+ /locus_tag="SARI_01724"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(order(1655210..1655212,1655306..1655311,
+ 1655537..1655539,1655669..1655677,1655681..1655686))
+ /locus_tag="SARI_01724"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(1655537..1655548)
+ /locus_tag="SARI_01724"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(1655354..1655383)
+ /locus_tag="SARI_01724"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(1655306..1655323)
+ /locus_tag="SARI_01724"
+ /note="Walker B; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(1655288..1655299)
+ /locus_tag="SARI_01724"
+ /note="D-loop; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(1655204..1655224)
+ /locus_tag="SARI_01724"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213224"
+ gene complement(1655815..1656627)
+ /locus_tag="SARI_01725"
+ CDS complement(1655815..1656627)
+ /locus_tag="SARI_01725"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="similar to AA sequence:INSD:AAV77519.1"
+ /note="'COG: COG1173 ABC-type
+ dipeptide/oligopeptide/nickel transport systems, permease
+ components;
+ Psort location: endoplasmic reticulum, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570755.1"
+ /db_xref="GI:161503643"
+ /db_xref="InterPro:IPR000515"
+ /translation="MLYNPAQTLLRLILSAACLLFIAGYGYATLSQPPEINLLARHLS
+ PDIQHWFGTDNLGRDVWLRCFQGAFVSLQIGIGAALCSGIIALVMAAAARIHPRLDIL
+ MRLITDSMLAMPHLLLLILICFTLGGGKSGVIAAVALTHWPRLALILRADAERVAQSD
+ YLTLTYRLGHGHLYCWRYHYLPALLPQWLTGTLLMFPHAVLHSAALSFLGFGLAPHEP
+ SLGLLLADALRFISHGNWWLVLFPGLMLFTLVMLFDQFARAVQRLWLRSDVC"
+ misc_feature complement(1655836..1656549)
+ /locus_tag="SARI_01725"
+ /note="ABC-type dipeptide/oligopeptide/nickel transport
+ systems, permease components [Amino acid transport and
+ metabolism / Inorganic ion transport and metabolism];
+ Region: DppC; COG1173"
+ /db_xref="CDD:224094"
+ misc_feature complement(1655872..1656426)
+ /locus_tag="SARI_01725"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(1655872..1655877,1655884..1655889,
+ 1655896..1655901,1655905..1655910,1655917..1655922,
+ 1655959..1655964,1656004..1656009,1656016..1656027,
+ 1656046..1656048,1656055..1656060,1656100..1656102,
+ 1656151..1656153,1656160..1656165,1656175..1656177,
+ 1656181..1656186,1656193..1656195,1656199..1656201,
+ 1656205..1656210,1656265..1656270,1656277..1656306,
+ 1656310..1656321,1656349..1656351,1656361..1656366,
+ 1656373..1656378))
+ /locus_tag="SARI_01725"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(1656010..1656027,1656262..1656303))
+ /locus_tag="SARI_01725"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(1655920..1655922,1655959..1655961,
+ 1655968..1655970,1656007..1656009,1656223..1656225))
+ /locus_tag="SARI_01725"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(1656079..1656081,1656091..1656096,
+ 1656112..1656150))
+ /locus_tag="SARI_01725"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene complement(1656617..1657591)
+ /locus_tag="SARI_01726"
+ CDS complement(1656617..1657591)
+ /locus_tag="SARI_01726"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="similar to AA sequence:REFSEQ:NP_456254.1"
+ /note="'KEGG: rha:RHA1_ro09047 1.2e-32 ABC peptide
+ transporter, permease component K02033;
+ COG: COG0601 ABC-type dipeptide/oligopeptide/nickel
+ transport systems, permease components;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570756.1"
+ /db_xref="GI:161503644"
+ /db_xref="InterPro:IPR000515"
+ /translation="MKSLFSHFLRLITLLVLVAAGTFILLSFSPVDPIRAYIGNDLLH
+ VPPEQYARIAARWGLDQPLWERFGHWFWRLLQGDMGYSMLFNAPVASVIRERFATSFA
+ LLAGAWLLSGFLGAALGFLAGRFLNRWPDRIICRISYLLSSLPTFWIAMLLLALFAVR
+ WPVLPVCCAWEPGNNAGAALLSERLRHLVLPVCALSLLGMGQIALHTREKIASVMKSE
+ FIRFARAQGDKGWSLLRHQVLRHAITPAICLQFASLGELLGGALLAEKVFAYPGLGQA
+ TIDAGLRGDVPLLMGIVLFSTLLVFAGNTISAWLVGVLNRSLERPDAL"
+ misc_feature complement(1656647..1657591)
+ /locus_tag="SARI_01726"
+ /note="ABC-type dipeptide/oligopeptide/nickel transport
+ systems, permease components [Amino acid transport and
+ metabolism / Inorganic ion transport and metabolism];
+ Region: DppB; COG0601"
+ /db_xref="CDD:223674"
+ misc_feature complement(<1656851..1657213)
+ /locus_tag="SARI_01726"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(1656890..1656892,1656941..1656943,
+ 1656950..1656955,1656965..1656967,1656971..1656976,
+ 1656983..1656985,1656989..1656991,1656995..1657000,
+ 1657130..1657132,1657136..1657141,1657148..1657177,
+ 1657181..1657192))
+ /locus_tag="SARI_01726"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(1657130..1657174)
+ /locus_tag="SARI_01726"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(1656869..1656871,1656881..1656886,
+ 1656902..1656940))
+ /locus_tag="SARI_01726"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene complement(1657591..1659267)
+ /locus_tag="SARI_01727"
+ CDS complement(1657591..1659267)
+ /locus_tag="SARI_01727"
+ /inference="protein motif:HMMPfam:IPR000914"
+ /inference="similar to AA sequence:INSD:AAV77521.1"
+ /note="'KEGG: shn:Shewana3_2650 4.8e-07 acetate kinase
+ K00925;
+ COG: COG0747 ABC-type dipeptide transport system,
+ periplasmic component;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570757.1"
+ /db_xref="GI:161503645"
+ /db_xref="InterPro:IPR000914"
+ /translation="MVAIMPSSGGFPTFTLRREEQKQRIIWDKLMIKGKLALVTCALT
+ LAFTSPLFAVSDTTDARTLKLAIGPEPTEGFDPMLGWTHGSYLLLHAPLLKQNADMSW
+ GNLLTEKVDTSPDGKTWTLTLKPDLKFSDGSPLTAEDVVFTYNKAAKSGGKIDMGNFS
+ HAQALDARRIEMTLSHPQSTFVNVLGSLGIVPASRYDEKTFAREPIGAGPYRLVSFQP
+ GQQLIVEANPWYAGKKNDFNRLVFVFLDEDNAYAAARSGQLGLVRIAPSMAVAPQQDN
+ LKLWVRDSVENRGIVFPMVPAGKKDANGYPVGNDVTADVAIRRAINYAINRKQLAEQV
+ MEGHAIPAYSAVQGLPWQNPSVVFSDGDMAKARAILDEAGWKKNSAGVREKAGNEARL
+ TLWYASGDSTRRDLAEAVRAMLQPLGIVVSLQSGSWETVERHMHANPTLFGWGSLDPM
+ ELFHHYSGKAAGVEYYNPGYYSNPVVEAHLKQAIDAPDWQKAVPFWQQVEWDGKQGAG
+ VQGDAAWAWLLNIQHTYLANSCIDLGKGAPEIHGSWSVLNNLDDWAWTCR"
+ misc_feature complement(1657666..1659084)
+ /locus_tag="SARI_01727"
+ /note="The substrate-binding component of an
+ uncharacterized ABC-type
+ nickel/dipeptide/oligopeptide-like import system contains
+ the type 2 periplasmic binding fold; Region:
+ PBP2_NikA_DppA_OppA_like_19; cd08518"
+ /db_xref="CDD:173883"
+ misc_feature complement(1657882..1658952)
+ /locus_tag="SARI_01727"
+ /note="Bacterial extracellular solute-binding proteins,
+ family 5 Middle; Region: SBP_bac_5; pfam00496"
+ /db_xref="CDD:215949"
+ gene 1659942..1660256
+ /locus_tag="SARI_01728"
+ CDS 1659942..1660256
+ /locus_tag="SARI_01728"
+ /inference="similar to AA sequence:REFSEQ:YP_150834.1"
+ /note="'COG: NOG18515 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570758.1"
+ /db_xref="GI:161503646"
+ /translation="MKNKKHIFSIIFIGSLLTGCATGPSPTGIGLYTDVKGPITTTSL
+ PATKTGKACAQTVLGIVNTGDASIDSAKKAGAISLVSSVDYETTGSYPFYGKTCIVVR
+ GQ"
+ misc_feature 1660023..1660253
+ /locus_tag="SARI_01728"
+ /note="TRL-like protein family; Region: TRL; pfam13146"
+ /db_xref="CDD:221935"
+ gene 1660402..1660928
+ /locus_tag="SARI_01729"
+ /note="Pseudogene compared to gi|16764605|ref|NP_460220.1|
+ putative inner membrane protein [Salmonella typhimurium
+ LT2]"
+ gene complement(1661024..1662067)
+ /locus_tag="SARI_01730"
+ CDS complement(1661024..1662067)
+ /locus_tag="SARI_01730"
+ /inference="protein motif:superfamily:IPR011040"
+ /inference="similar to AA sequence:INSD:AAL20178.1"
+ /note="'KEGG: eci:UTI89_C0678 3.6e-19 hypothetical protein
+ K01186;
+ COG: COG4692 Predicted neuraminidase (sialidase);
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570759.1"
+ /db_xref="GI:161503647"
+ /db_xref="InterPro:IPR011040"
+ /translation="MKLALVNRQKIIPASRATPFQCHASTLVCLPCGTLVAAWFAGLR
+ EGSEDTAIWLSRYEHNIWTKPQRVAACEGEAHWNPVLFSPSDRLWLFYKVGSDVHVWK
+ TWFITSSDRGFTWSTPTELVKGDILPRGPAKNKLLLASNGAWIAPGSIENAEHWEAFV
+ DRSCDEGKHWDISFVPLEPHNMISAKNVALWEGIKKGMLWECCLENLLRWDGVIQPTL
+ WESSPGHIHMLLRSTRGAVFRSDSTDYGATWSVARATALPNNNSGIDLVSMQDGTLIL
+ ALNPVNGNWGKRYPLSLIASCDNGTSWLPLLELESNRGEYSYPAIINEEGVVHITYTW
+ NRKNIVYCRLQTK"
+ misc_feature complement(1661030..1662067)
+ /locus_tag="SARI_01730"
+ /note="Predicted neuraminidase (sialidase) [Carbohydrate
+ transport and metabolism]; Region: COG4692"
+ /db_xref="CDD:227036"
+ misc_feature complement(1661078..1661971)
+ /locus_tag="SARI_01730"
+ /note="BNR repeat-like domain; Region: BNR_2; pfam13088"
+ /db_xref="CDD:221914"
+ gene complement(1662407..1662877)
+ /locus_tag="SARI_01731"
+ CDS complement(1662407..1662877)
+ /locus_tag="SARI_01731"
+ /inference="protein motif:HMMPfam:IPR002068"
+ /inference="protein motif:superfamily:IPR008978"
+ /inference="similar to AA sequence:INSD:CAD02104.1"
+ /note="'COG: COG0071 Molecular chaperone (small heat shock
+ protein);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570760.1"
+ /db_xref="GI:161503648"
+ /db_xref="InterPro:IPR002068"
+ /db_xref="InterPro:IPR008978"
+ /translation="MMALRTLSALPVFADSLFSDRFHRIDRLFSQLTGDTPVAATPAY
+ DLKKRDANNYLLTLSVPGWKEEELEIETVGGNLNITGKHTEDTVEDQANWIYRGIRKT
+ DFQLSFSLPEHAKVNNAKLEQGLLSVEIYQEIPESEKPKKIAIESKQKALEHKS"
+ misc_feature complement(1662440..1662874)
+ /locus_tag="SARI_01731"
+ /note="Molecular chaperone (small heat shock protein)
+ [Posttranslational modification, protein turnover,
+ chaperones]; Region: IbpA; COG0071"
+ /db_xref="CDD:223149"
+ misc_feature complement(1662482..1662754)
+ /locus_tag="SARI_01731"
+ /note="Alpha-crystallin domain (ACD) found in Escherichia
+ coli inclusion body-associated proteins IbpA and IbpB, and
+ similar proteins. IbpA and IbpB are 16 kDa small heat
+ shock proteins (sHsps). sHsps are molecular chaperones
+ that suppress protein aggregation...; Region:
+ ACD_IbpA-B_like; cd06470"
+ /db_xref="CDD:107227"
+ misc_feature complement(order(1662503..1662508,1662560..1662562,
+ 1662692..1662697,1662701..1662703,1662707..1662709,
+ 1662734..1662748))
+ /locus_tag="SARI_01731"
+ /note="putative dimer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:107227"
+ gene 1663079..1663366
+ /locus_tag="SARI_01732"
+ CDS 1663079..1663366
+ /locus_tag="SARI_01732"
+ /inference="similar to AA sequence:REFSEQ:YP_216248.1"
+ /note="'Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570761.1"
+ /db_xref="GI:161503649"
+ /translation="MIMIINCINVSKLVMAVTNTPSPLLDPAPPSGGLFGGNMVAKNK
+ IHGRRMRQPLQQLHNRCFFQQLAVSPPGTKYVSVTAGTKTWLIHLVTSEDR"
+ gene complement(1663497..1663622)
+ /locus_tag="SARI_01733"
+ CDS complement(1663497..1663622)
+ /locus_tag="SARI_01733"
+ /inference="similar to AA sequence:INSD:CAD02106.1"
+ /note="'COG: NOG33500 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative lipoprotein"
+ /protein_id="YP_001570762.1"
+ /db_xref="GI:161503650"
+ /translation="MKKWLIGGMLIASFLTGCLMWHNIDKWFNKDIEAFYAGDDN"
+ gene complement(1663619..1663756)
+ /locus_tag="SARI_01734"
+ CDS complement(1663619..1663756)
+ /locus_tag="SARI_01734"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570763.1"
+ /db_xref="GI:161503651"
+ /translation="MQLGKTLPFTILRQTEAVSETISSNGGLFIIGQVMKLAGIIQEY
+ M"
+ gene 1664001..1664345
+ /locus_tag="SARI_01735"
+ CDS 1664001..1664345
+ /locus_tag="SARI_01735"
+ /inference="similar to AA sequence:INSD:AAL20175.1"
+ /note="PliC; periplasmic lysozyme inhibitor of c-type
+ lysozyme"
+ /codon_start=1
+ /transl_table=11
+ /product="lysozyme inhibitor"
+ /protein_id="YP_001570764.1"
+ /db_xref="GI:161503652"
+ /translation="MMKRKLIPLTLFLTALSASTASIAASQEISKSIYTCNDNQVMEV
+ VYVNTEAGNAYAIINQVNEMIPMRLMKMASGANYEAMNKNYTYKLYTKGKTAELVEGD
+ DKPVLSNCYLAN"
+ misc_feature 1664001..1664339
+ /locus_tag="SARI_01735"
+ /note="lysozyme inhibitor; Provisional; Region: PRK13791"
+ /db_xref="CDD:237508"
+ gene complement(1665078..1665151)
+ /locus_tag="SARI_01736"
+ tRNA complement(1665078..1665151)
+ /locus_tag="SARI_01736"
+ /product="tRNA-Arg"
+ gene complement(1665508..1666065)
+ /locus_tag="SARI_01737"
+ CDS complement(1665508..1666065)
+ /locus_tag="SARI_01737"
+ /inference="protein motif:FPrintScan:IPR000758"
+ /inference="protein motif:HMMPfam:IPR000758"
+ /inference="protein motif:ScanRegExp:IPR000758"
+ /inference="similar to AA sequence:REFSEQ:NP_460215.1"
+ /note="'COG: COG3637 Opacity protein and related surface
+ antigens;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570765.1"
+ /db_xref="GI:161503653"
+ /db_xref="InterPro:IPR000758"
+ /translation="MKNFIFSTLVVTTSVWVVNVAQADTNALSVGYAQSKVQDFKNIR
+ GVNMKYRYEDDSPVSFITSLSYLYGDSKASGSSEPEGIHYHDKFEVKYGSLMVGPAYR
+ LNDNFSLYALGGAGTMKATLKEHSTQDGESTSGKISSRKTGFAWGAGVQMNPMENIVI
+ DVGYEGSNISSTKINGFNVGVGYRF"
+ misc_feature complement(1665511..1666005)
+ /locus_tag="SARI_01737"
+ /note="Outer membrane protein beta-barrel domain; Region:
+ OMP_b-brl; cl17254"
+ /db_xref="CDD:247808"
+ gene complement(1666371..1666568)
+ /locus_tag="SARI_01738"
+ CDS complement(1666371..1666568)
+ /locus_tag="SARI_01738"
+ /note="'COG: NOG33321 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570766.1"
+ /db_xref="GI:161503654"
+ /translation="MFAAPTMAYNCISSGESSEDYEAQCDIFWLYGEFAYWACFGLVG
+ VSYFGIREMQNILFEYQRLKS"
+ gene 1666916..1667179
+ /locus_tag="SARI_01739"
+ CDS 1666916..1667179
+ /locus_tag="SARI_01739"
+ /inference="similar to AA sequence:REFSEQ:YP_216242.1"
+ /note="'COG: NOG30737 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="virulence protein PagD"
+ /protein_id="YP_001570767.2"
+ /db_xref="GI:448236238"
+ /translation="MKHHAFMLWSLIILSLPVLASSYRSPGLQQASWEIFIYDFGSKT
+ PQPPANTDKKQARKINSPFCSTTKPMMPAPTNGSKKENTLTRM"
+ gene 1667383..1667610
+ /locus_tag="SARI_01740"
+ CDS 1667383..1667610
+ /locus_tag="SARI_01740"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570768.1"
+ /db_xref="GI:161503656"
+ /translation="MDVKMFRSIFQHAANTKQKCLSPVYALSFVAFMASAGLPPPTFI
+ FHNSAFFQKKLVRALWQERSYKTGCLFKVAG"
+ gene 1668069..1668590
+ /locus_tag="SARI_01741"
+ CDS 1668069..1668590
+ /locus_tag="SARI_01741"
+ /inference="protein motif:HMMPfam:IPR000772"
+ /inference="protein motif:HMMSmart:IPR000772"
+ /inference="protein motif:superfamily:IPR008997"
+ /inference="similar to AA sequence:REFSEQ:YP_150843.1"
+ /note="'KEGG: sde:Sde_3710 9.6e-08 arabinogalactan
+ endo-1,4-beta-galactosidase K01224;
+ COG: NOG25721 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570769.1"
+ /db_xref="GI:161503657"
+ /db_xref="InterPro:IPR000772"
+ /db_xref="InterPro:IPR008997"
+ /translation="MALLSGKTILVLCLSSVLCGCTNDGLPAPYSINLSFPVITQNQI
+ NSDGYYINDAEQIRTTDGLCLDAGSEQQNRLTLQECKHVQSQLFSFYRDRITHGVKCL
+ DAAGQGTKEGTPVILYSCTGNDNQRWFTDDNKIKGKQSRKCLGTNSFIVRKGNPVVLA
+ DCDFSRALEFTIR"
+ misc_feature 1668234..1668563
+ /locus_tag="SARI_01741"
+ /note="Ricin-type beta-trefoil; Region: RICIN; smart00458"
+ /db_xref="CDD:214672"
+ misc_feature 1668234..1668557
+ /locus_tag="SARI_01741"
+ /note="Ricin-type beta-trefoil; Carbohydrate-binding
+ domain formed from presumed gene triplication. The domain
+ is found in a variety of molecules serving diverse
+ functions such as enzymatic activity, inhibitory toxicity
+ and signal transduction. Highly specific...; Region:
+ RICIN; cd00161"
+ /db_xref="CDD:238092"
+ misc_feature order(1668264..1668266,1668294..1668296,1668300..1668302,
+ 1668321..1668326,1668375..1668377,1668414..1668416,
+ 1668420..1668422,1668441..1668446,1668501..1668503,
+ 1668540..1668542,1668546..1668548)
+ /locus_tag="SARI_01741"
+ /note="putative sugar binding sites [chemical binding];
+ other site"
+ /db_xref="CDD:238092"
+ misc_feature order(1668324..1668332,1668444..1668452)
+ /locus_tag="SARI_01741"
+ /note="Q-X-W motif; other site"
+ /db_xref="CDD:238092"
+ gene 1668801..1669040
+ /locus_tag="SARI_01742"
+ CDS 1668801..1669040
+ /locus_tag="SARI_01742"
+ /inference="protein motif:HMMPfam:IPR010391"
+ /inference="similar to AA sequence:INSD:CAD02118.1"
+ /note="'COG: NOG15335 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="macrophage survival protein"
+ /protein_id="YP_001570770.2"
+ /db_xref="GI:448236239"
+ /db_xref="InterPro:IPR010391"
+ /translation="MFVELVYDKRNVEGLPGAREIILNELTKRVHRIFPAAQVRVKPM
+ QANALNSDCTKTEKERLNRMLEEMFEEADMWLVAE"
+ misc_feature 1668840..1669031
+ /locus_tag="SARI_01742"
+ /note="DinI-like family; Region: DinI; pfam06183"
+ /db_xref="CDD:114876"
+ gene complement(1669131..1673285)
+ /locus_tag="SARI_01743"
+ CDS complement(1669131..1673285)
+ /locus_tag="SARI_01743"
+ /inference="protein motif:HMMPfam:IPR000710"
+ /inference="protein motif:HMMPfam:IPR005546"
+ /inference="protein motif:HMMTigr:IPR006315"
+ /inference="protein motif:superfamily:IPR009003"
+ /inference="protein motif:superfamily:IPR011050"
+ /note="'KEGG: nma:NMA0905 5.0e-94 iga; IgA1 protease
+ K01347;
+ COG: COG3468 Type V secretory pathway, adhesin AidA;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570771.1"
+ /db_xref="GI:161503659"
+ /db_xref="InterPro:IPR000710"
+ /db_xref="InterPro:IPR005546"
+ /db_xref="InterPro:IPR006315"
+ /db_xref="InterPro:IPR009003"
+ /db_xref="InterPro:IPR011050"
+ /translation="MNKIYALKYSVRQGALVPVSELATHAKKSSRTGLIKRLIPSVII
+ NTLLLGYSVTSLASVVRYDIPYQTIRDFAENKGQFTPGSMNIPVYSKTGTVIGYLNNA
+ PMPDFSSANHQSAVATLVSPQYIMSVKHNGGYQSVSFGDGENGYRLVDRNNQPGRDFH
+ APRLNKLVTEVEPSLMTQSGMVSGAYSDKNRYPAFYRVGSGTQEIKETDGHIISISGA
+ YSYLTGGTAGAPGSYNQGQMISTNTNKELYSLAQGPMGTHPRVGDSGSPLFAYDSVLQ
+ KWVIVGVDSSGGGGGTNWAVVDANFVNQAIQDDTDALVTFMADQGPLRWAFNSTDGTG
+ TLIQQETVYQMHGQKGTDLNEGKNLVFNGADGQIALEDAVNQGAGALAFNGNYTVFTT
+ NGSTWRGAGLDITQDAEVSWQVNGVQGDNLHKIGEGVLKVNGTGINPGGLKVGDGTVI
+ LAQRPDEDGKVQAFSSVNIASGRPTVILTDSRQVNSDNISWGFRGGRLDINGNDVTFH
+ KINAADNGANIINTSDTFATVSIKPLTDMTVTINDWDKNKPSGGAAGLLYKYNNIYTH
+ TVDYFIQKRKGYGYYPVNQSDNDSWEYVGHNEMQAIERVKSRRPIDDRIYHGNIVGNI
+ HLNIDTSHSNGGVIFDGNIDTPDGELMQSGGQLTFQGHPVIHAYNGKWLTDKLKSLGD
+ DSVRNQPTSFDQPDWENRTFHLKTLVLKNTYFGLARNASLNGNIEAVHSSVTLGTPNL
+ YIDLNDGNGTKVTPQKGISVAGQESDMSRYAGKVTLSEQSTLDVREIFTGSIQSQDSD
+ VTVSSRHAKLDDYSRFGNTSLTLQEGARLTATGGWWSDSDVIVGPAATLSLTGTPAAS
+ LPGQMSPAFYSTNYGAGYQLGAASELQFSPYTFVTGDIRAAGDARIAIGSSDNVVLAD
+ NLPLEEQMMYGLFNGFRNVYSGNVSAPQGRMAMTDTQWQMPGDSRIGALRMTRSLAGF
+ TGRGFHTLATDTLQANQSAFALRTDLKDSDKIVVNQNAEGRDNTLFVNFLKKPSGKES
+ LNIPLVSAPAGTSPTMFKAAERVTGFSLVTPTLHTTEQDGKIQWILDGFKTAPDKGTA
+ TSANSFMGMGYKNFMTEVNNLTKRMGDLRDTQGEDGMWVRIMNGAGTGDAGYSDRYTH
+ LQTGFDKKHRLPGADLFTGVLMSYTDSSASGRAYSGDTHSLGGGLYASVMFDSGAYMD
+ VIGKYIHHDNDYNAGFAGLGKRNYGTHSWYAGLEGGYRYHLTESLYIEPQAELVYGTV
+ SGTTLKWNDNGMDVSMRSKTYNPLIGRTGVALGKTFSGKDWSVTAHTGVDYQFDLVTN
+ GEKALRDASGEKRFTGDKDSRMLYNVGLNAQVKDNVRFGLELEQSAFGKYNVDHAINA
+ NFRYMF"
+ misc_feature complement(1673217..1673285)
+ /locus_tag="SARI_01743"
+ /note="Extended Signal Peptide of Type V secretion system;
+ Region: ESPR; pfam13018"
+ /db_xref="CDD:205199"
+ misc_feature complement(1670850..1673114)
+ /locus_tag="SARI_01743"
+ /note="Immunoglobulin A1 protease; Region: Peptidase_S6;
+ pfam02395"
+ /db_xref="CDD:217015"
+ misc_feature complement(1670037..>1670561)
+ /locus_tag="SARI_01743"
+ /note="Pertactin-like passenger domains (virulence
+ factors) of autotransporter proteins of the type V
+ secretion system. Autotransporters are proteins used by
+ Gram-negative bacteria to transport proteins across their
+ outer membranes. The C-terminal (beta) domain...; Region:
+ PL_Passenger_AT; cl00185"
+ /db_xref="CDD:241667"
+ misc_feature complement(1669134..1670369)
+ /locus_tag="SARI_01743"
+ /note="outer membrane autotransporter barrel domain;
+ Region: autotrans_barl; TIGR01414"
+ /db_xref="CDD:233402"
+ misc_feature complement(1669173..1669931)
+ /locus_tag="SARI_01743"
+ /note="Autotransporter beta-domain; Region:
+ Autotransporter; pfam03797"
+ /db_xref="CDD:217734"
+ gene 1673980..1674381
+ /locus_tag="SARI_01744"
+ CDS 1673980..1674381
+ /locus_tag="SARI_01744"
+ /inference="protein motif:HMMPfam:IPR007280"
+ /inference="similar to AA sequence:INSD:BAB35095.1"
+ /note="'COG: NOG10257 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570772.1"
+ /db_xref="GI:161503660"
+ /db_xref="InterPro:IPR007280"
+ /translation="MKIKRIGKAVFLLALLTSTCLAAGKNINVEFRKGHYSAQYSGII
+ KGYDYDTYKFQAKKGQQLHVNISNEGVDTYLFGPEISDSVDLSRYSSALNDNGQYTLP
+ ASGNYELRILQTRNDARKNKAKKYRVNIQIK"
+ misc_feature 1674121..1674312
+ /locus_tag="SARI_01744"
+ /note="Bacterial pre-peptidase C-terminal domain; Region:
+ PPC; pfam04151"
+ /db_xref="CDD:217929"
+ gene 1675182..1675472
+ /locus_tag="SARI_01745"
+ CDS 1675182..1675472
+ /locus_tag="SARI_01745"
+ /inference="protein motif:HMMPfam:IPR010438"
+ /inference="similar to AA sequence:SwissProt:P26814"
+ /note="'COG: NOG23112 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570773.1"
+ /db_xref="GI:161503661"
+ /db_xref="InterPro:IPR010438"
+ /translation="MIKTVSAYALVLLLSGCAQQTFKMSSEPVTSPKQIITHHFFISG
+ LGQKKTVDAAAICGGTDKVMRTETQQTFVNSLLAFVTLGIYTPLEARVYCSN"
+ misc_feature 1675182..1675466
+ /locus_tag="SARI_01745"
+ /note="Bor protein; Region: Lambda_Bor; pfam06291"
+ /db_xref="CDD:114982"
+ gene 1675951..1676919
+ /locus_tag="SARI_01746"
+ CDS 1675951..1676919
+ /locus_tag="SARI_01746"
+ /inference="protein motif:BlastProDom:IPR000036"
+ /inference="protein motif:HMMPfam:IPR000036"
+ /inference="protein motif:ScanRegExp:IPR000036"
+ /inference="similar to AA sequence:INSD:BAA97899.1"
+ /note="outer membrane protease; involved in virulence in
+ many organisms; OmpT; IcsP; SopA; Pla; PgtE; omptin; in
+ Escherichia coli OmpT can degrade antimicrobial peptides;
+ in Yersinia Pla activates plasminogen during infection; in
+ Shigella flexneria SopA cleaves the autotransporter IcsA"
+ /codon_start=1
+ /transl_table=11
+ /product="outer membrane protease"
+ /protein_id="YP_001570774.1"
+ /db_xref="GI:161503662"
+ /db_xref="InterPro:IPR000036"
+ /translation="MTNGVIFMRLKLLGIALTAPVAFNSLASTEFSFLTPEKVSADIS
+ LGTLSGKTKERVYEPAEGGRKVSQLDWKYNNAAIIKGAINWDLMPWLSVGAAGWSTID
+ SRGANMVDKDWQDASHAGTWTDESRHPNTHLNYANEFDLNIKGWFLNEPDYRLGLMAG
+ YQESRYSFNATGGTYIYSENGGFRNETGSFLDGERGIGYKQQFKMPYVGLTGSYRYDN
+ FEFSGAFKYSGWVRASDNDEHYAREITFRSKVKDQNYYSIAANAGYYVTPNAKLYVEG
+ TWNRITNKKGDTTLYDRSNNTSEHSKNTAGIENYNFMTTVGLKYTF"
+ misc_feature 1675972..1676916
+ /locus_tag="SARI_01746"
+ /note="outer membrane protease; Reviewed; Region:
+ PRK10993"
+ /db_xref="CDD:236813"
+ gene 1677168..1679624
+ /locus_tag="SARI_01747"
+ CDS 1677168..1679624
+ /locus_tag="SARI_01747"
+ /inference="protein motif:HMMPfam:IPR001214"
+ /inference="protein motif:HMMPfam:IPR005543"
+ /inference="similar to AA sequence:INSD:ABB61158.1"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570775.1"
+ /db_xref="GI:161503663"
+ /db_xref="InterPro:IPR001214"
+ /db_xref="InterPro:IPR005543"
+ /translation="MRGIGAVIHLHPPAGSSAPPLNFSGMWNNLRDWFALPAQDEAAQ
+ CFRAFYQPDEGTSSSDRLMCFFKLKALASPGRQANFTAERRIDTGETICVIASGKNND
+ FPTVTLHLSDQEWHTAQSQEETIDSTLLPLNADNPVATTTEESAEKSRKGTRITNAQI
+ QAWRDLPPETKREAGGWKIWAHTQGISISGARHYLTNTGLTTYGMVRLQQPEEKGYSI
+ TNAQIQAWLDLPPETKREAGGWKIWAQTQGISISSARHYLTNTGLTPQGMVRMQQPEE
+ KGSSITNAQIQAWRDLPPETKRETGGWKTWAQLQGIASGSAGNFLTNSGLTLFGTERL
+ KPPGERSTPITNMQIQTWRDLPPETKREAGGWMKWAQLQGINIKSARTFLTNSGLTLV
+ GTERLKPPEERGTPITNTQIQTWRDLPQEAKREAGGWMKWAQAQGVDISCARSYLTNT
+ GLKPKGIVRLQPPGERGSPITQAQLLAWFNMSPEERHTSGGWAAWAQTQGISYRSARK
+ YLALADHEMSPRHTSRSSPSATVTSASPQVSSSSDTGDEITVIVSPPPQNHGEKRSLP
+ RTNEDNSAPPAKQIKEEEDAVTWRTHQINNDLPILQHWRDPTISVMAQAEGRIETLRV
+ TRWGPLFSTLSRQTKARINQVIGWFLQNEGNHDVRMNEMMSVAIPLDDSDGYRGRTVY
+ ARTDLAAFTVLGPYSGRLLDSEKVRCEYEKEYGKDASNYYFATRSQERLVSGFPQGNL
+ LSLINNPVFIHRTAEGEARQNVSAVLVGKNIHFFLTTRDISAGEELWFDYGPDYMHFE
+ SGEALRSVQVKEESPSSDEG"
+ misc_feature 1679196..1679555
+ /locus_tag="SARI_01747"
+ /note="SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)
+ domain; Region: SET; smart00317"
+ /db_xref="CDD:214614"
+ gene complement(1680246..1681313)
+ /locus_tag="SARI_01748"
+ CDS complement(1680246..1681313)
+ /locus_tag="SARI_01748"
+ /inference="protein motif:HMMPfam:IPR003507"
+ /inference="similar to AA sequence:REFSEQ:YP_216231.1"
+ /note="'KEGG: rbe:RBE_0581 1.7e-26 mccF; microcin C7
+ self-immunity protein K01297;
+ COG: COG1619 Uncharacterized proteins, homologs of
+ microcin C7 resistance protein MccF;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570776.1"
+ /db_xref="GI:161503664"
+ /db_xref="InterPro:IPR003507"
+ /translation="MVTRRELLLKTVGVAVCSSLELNSFAGIKDTSLNVPSWDFLKEG
+ DVIDVIAPSSPIDDPQERYKKIEKYFKENTPFKINIPDHLIEPTALLDEANTIWKRAK
+ FVYDAFSSESKAIWAISGGGWGASILGELMSYPKPDKIKPIIGYSDITALHIYANEYL
+ NFPSIHSVVLGINGDISPGYNKNGIGATLDILSGKKTEVMYELSPLNKLAASMTEVTG
+ KIVGGNSLLVSALNGAPGLSLKTKGKFLFLESIADDPGQFSRKLMGLAYSPVIKDCLG
+ VIFGDVIKDGGKINSPLVQSQFDYIIHRFAEQFIEDKIALKANNLFGHGAINMPLPLN
+ TFAVVKRSGANITATISTNRV"
+ misc_feature complement(1680303..1681175)
+ /locus_tag="SARI_01748"
+ /note="LD-Carboxypeptidase, a serine protease, includes
+ microcin C7 self immunity protein; Region: Peptidase_S66;
+ cd07025"
+ /db_xref="CDD:132882"
+ misc_feature complement(order(1680387..1680392,1680522..1680527,
+ 1680534..1680539,1680543..1680548,1680615..1680620,
+ 1680624..1680629,1680933..1680938))
+ /locus_tag="SARI_01748"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:132882"
+ misc_feature complement(order(1680342..1680344,1680567..1680569,
+ 1680873..1680875))
+ /locus_tag="SARI_01748"
+ /note="catalytic triad [active]"
+ /db_xref="CDD:132882"
+ gene complement(1681396..1681626)
+ /locus_tag="SARI_01749"
+ CDS complement(1681396..1681626)
+ /locus_tag="SARI_01749"
+ /inference="protein motif:HMMPfam:IPR001584"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:INSD:ABG29522.1"
+ /note="'COG: COG2801 Transposase and inactivated
+ derivatives;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570777.1"
+ /db_xref="GI:161503665"
+ /db_xref="InterPro:IPR001584"
+ /db_xref="InterPro:IPR012337"
+ /translation="MLSVAAGTPGVTAVYGAMRGSMSAKGNCYDNARAESFFHSLKVE
+ CVHGEHFASREIMRPTVFNDIEYDYNRRHLYN"
+ misc_feature complement(1681492..>1681566)
+ /locus_tag="SARI_01749"
+ /note="Integrase core domain; Region: rve; pfam00665"
+ /db_xref="CDD:216050"
+ misc_feature complement(<1681405..1681524)
+ /locus_tag="SARI_01749"
+ /note="Integrase core domain; Region: rve_2; pfam13333"
+ /db_xref="CDD:205513"
+ gene complement(1681687..1681833)
+ /locus_tag="SARI_01750"
+ CDS complement(1681687..1681833)
+ /locus_tag="SARI_01750"
+ /note="'COG: COG2963 Transposase and inactivated
+ derivatives;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570778.1"
+ /db_xref="GI:161503666"
+ /translation="MTKPASTNKKPRKQHTPEFRKEALKLAERDEELSILQKAATYFA
+ KRLK"
+ gene 1682159..1682845
+ /locus_tag="SARI_01751"
+ CDS 1682159..1682845
+ /locus_tag="SARI_01751"
+ /inference="protein motif:HMMPfam:IPR010777"
+ /inference="protein motif:ScanRegExp:IPR006025"
+ /inference="similar to AA sequence:INSD:AAC33726.1"
+ /note="'COG: NOG26051 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570779.1"
+ /db_xref="GI:161503667"
+ /db_xref="InterPro:IPR006025"
+ /db_xref="InterPro:IPR010777"
+ /translation="MLPGTSRVSSHSGTSTYGLNTADTPVFPDIPEHGQNPSQLRLAY
+ DTLAINSEFRLEPEYAVEYLISGAGGIDPDTEIDDDIYNECYSELSSVLQNAYTQSGT
+ FRRLMNYAYEKELYDVEKRWLLGAGETFETTVTPEDLNLSGGRRVICLNLDDTDDDDV
+ YPEHYESNEGPQLFDTTRSFMHEIVHALTNLQDEEENHPRGPVVEYTNIILKEMGHPS
+ PPRIAYTSNN"
+ misc_feature 1682228..1682830
+ /locus_tag="SARI_01751"
+ /note="PipA protein; Region: PipA; pfam07108"
+ /db_xref="CDD:203581"
+ gene complement(1683274..1684524)
+ /locus_tag="SARI_01752"
+ CDS complement(1683274..1684524)
+ /locus_tag="SARI_01752"
+ /inference="protein motif:Gene3D:IPR013814"
+ /inference="protein motif:HMMPanther:IPR001804"
+ /inference="protein motif:HMMPfam:IPR001804"
+ /inference="protein motif:HMMTigr:IPR004439"
+ /inference="protein motif:ScanRegExp:IPR001804"
+ /inference="similar to AA sequence:INSD:CAD08362.1"
+ /note="Converts isocitrate to alpha ketoglutarate"
+ /codon_start=1
+ /transl_table=11
+ /product="isocitrate dehydrogenase"
+ /protein_id="YP_001570780.1"
+ /db_xref="GI:161503668"
+ /db_xref="InterPro:IPR001804"
+ /db_xref="InterPro:IPR004439"
+ /db_xref="InterPro:IPR013814"
+ /translation="MESKVVVPAEGKKITLQNGKLNVPENPIIPFIEGDGIGVDVTPA
+ MLKVVDAAVEKAYKGERKISWMEIYTGEKSTQVYGQDVWLPAETLDLIRDYRVAIKGP
+ LTTPVGGGIRSLNVALRQELDLYVCLRPVRYYQGTPSPVKHPELTDMVIFRENSEDIY
+ AGIEWKADSADAEKVIKFLREEMGVKKIRFPEHCGIGIKPCSEEGTKRLVRAAIEYAI
+ TNDRDSVTLVHKGNIMKFTEGAFKDWGYQLARDEFSGELIDGGPWLKIKNPNTGKEIV
+ VKDVIADAFLQQILLRPAEYDVIACMNLNGDYISDALAAQVGGIGIAPGANIGDECAL
+ FEATHGTAPKYAGQDKVNPGSIILSAEMMLRHMQWFEAADLIVKGMEGAIAAKTVTYD
+ FERLMDGAKLLKCSEFGDAIIANM"
+ misc_feature complement(1683280..1684524)
+ /locus_tag="SARI_01752"
+ /note="isocitrate dehydrogenase; Validated; Region:
+ PRK07362"
+ /db_xref="CDD:180944"
+ misc_feature complement(1683277..1684503)
+ /locus_tag="SARI_01752"
+ /note="isocitrate dehydrogenase; Reviewed; Region:
+ PRK07006"
+ /db_xref="CDD:180792"
+ gene 1684624..1685361
+ /locus_tag="SARI_01753"
+ CDS 1684624..1685361
+ /locus_tag="SARI_01753"
+ /inference="protein motif:HMMPfam:IPR006145"
+ /inference="protein motif:HMMTigr:IPR000748"
+ /inference="protein motif:ScanRegExp:IPR000748"
+ /inference="similar to AA sequence:REFSEQ:NP_460207.1"
+ /note="'KEGG: stm:STM1237 4.6e-111 ymfC; putative
+ ribosomal large subunit pseudouridine synthase K06181;
+ COG: COG1187 16S rRNA uridine-516 pseudouridylate synthase
+ and related pseudouridylate synthases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570781.1"
+ /db_xref="GI:161503669"
+ /db_xref="InterPro:IPR000748"
+ /db_xref="InterPro:IPR006145"
+ /translation="MFCNEHVNTTLLFAAMKDTPYCAIMRQLISYEHTMKKTSFRNHY
+ VKRFSSRQAPKPRKENQPKRVVLFNKPYDVLPQFTDEAGRRTLKDFIPVQGVYAAGRL
+ DRDSEGLLVLTNDGALQARLTQPDKRTGKIYYVQVEGIPDHEALQALRAGVTLNDGPT
+ LPAGIEIVAEPDWLWPRTPPIRERKNIPTTWLKVTLYEGRNRQIRRMTAHVGHPTLRL
+ IRYSMGDYMLNGLNNGQWREIAQEKDR"
+ misc_feature 1684696..1685340
+ /locus_tag="SARI_01753"
+ /note="23S rRNA pseudouridine synthase E; Provisional;
+ Region: PRK11394"
+ /db_xref="CDD:183115"
+ misc_feature 1684816..1685316
+ /locus_tag="SARI_01753"
+ /note="Pseudouridine synthase, Escherichia coli RluE;
+ Region: PseudoU_synth_RluE; cd02566"
+ /db_xref="CDD:211334"
+ misc_feature order(1684921..1684932,1685236..1685238)
+ /locus_tag="SARI_01753"
+ /note="probable active site [active]"
+ /db_xref="CDD:211334"
+ gene 1685358..1685687
+ /locus_tag="SARI_01754"
+ CDS 1685358..1685687
+ /locus_tag="SARI_01754"
+ /inference="similar to AA sequence:INSD:AAV77541.1"
+ /note="'COG: COG4461 Uncharacterized protein conserved in
+ bacteria, putative lipoprotein;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570782.1"
+ /db_xref="GI:161503670"
+ /translation="MKRLLITFALLTPLLVNAASFDCQKAKAADEKTICAHLALNDKD
+ VEMHTKYQFLKGLFAMGNRGALQDAQQSWLKQRQQCKTDAACLTKAYNERLKQLDALY
+ DHIDKPL"
+ misc_feature 1685403..>1685684
+ /locus_tag="SARI_01754"
+ /note="Uncharacterized protein conserved in bacteria,
+ putative lipoprotein [Function unknown]; Region: LprI;
+ COG4461"
+ /db_xref="CDD:226868"
+ misc_feature 1685421..1685651
+ /locus_tag="SARI_01754"
+ /note="Protein of unknown function (DUF1311); Region:
+ DUF1311; pfam07007"
+ /db_xref="CDD:219267"
+ gene 1685699..1686160
+ /locus_tag="SARI_01755"
+ CDS 1685699..1686160
+ /locus_tag="SARI_01755"
+ /inference="protein motif:FPrintScan:IPR000086"
+ /inference="protein motif:Gene3D:IPR000086"
+ /inference="protein motif:HMMPfam:IPR000086"
+ /inference="protein motif:ScanRegExp:IPR000086"
+ /inference="protein motif:superfamily:IPR000086"
+ /inference="similar to AA sequence:INSD:AAL20164.1"
+ /note="'KEGG: stm:STM1235 5.7e-81 ymfB; putative MutT-like
+ protein;
+ COG: COG0494 NTP pyrophosphohydrolases including oxidative
+ damage repair enzymes;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570783.1"
+ /db_xref="GI:161503671"
+ /db_xref="InterPro:IPR000086"
+ /translation="MLKPHVTVACIVHAEDKFLVVEETINGKSLWNQPAGHLEADETL
+ AQAAARELWEETGITAQPQYFIRMHQWIAPDKTPFLRFLFAIKLDHICATEPHDNDID
+ CCRWVSADEILNASNLRSPLVAESIRSYQTGQRYPLSIVGEFNWPFTEGVK"
+ misc_feature 1685714..1686109
+ /locus_tag="SARI_01755"
+ /note="Contains a crystal structure of the Nudix hydrolase
+ from Nitrosomonas europaea, which has an unknown function.
+ In general, members of the Nudix hydrolase superfamily
+ catalyze the hydrolysis of NUcleoside DIphosphates linked
+ to other moieties, X. Enzymes...; Region:
+ Nudix_Hydrolase_2; cd03675"
+ /db_xref="CDD:239647"
+ misc_feature 1685804..1685872
+ /locus_tag="SARI_01755"
+ /note="nudix motif; other site"
+ /db_xref="CDD:239647"
+ gene 1686169..1687320
+ /gene="mnmA"
+ /locus_tag="SARI_01756"
+ CDS 1686169..1687320
+ /gene="mnmA"
+ /locus_tag="SARI_01756"
+ /inference="protein motif:HMMPanther:IPR004506"
+ /inference="protein motif:HMMPfam:IPR004506"
+ /inference="protein motif:HMMTigr:IPR004506"
+ /inference="protein motif:ScanRegExp:IPR002086"
+ /inference="similar to AA sequence:REFSEQ:YP_216172.1"
+ /note="catalyzes a sulfuration reaction to synthesize
+ 2-thiouridine at the U34 position of tRNAs"
+ /codon_start=1
+ /transl_table=11
+ /product="tRNA-specific 2-thiouridylase MnmA"
+ /protein_id="YP_001570784.1"
+ /db_xref="GI:161503672"
+ /db_xref="InterPro:IPR002086"
+ /db_xref="InterPro:IPR004506"
+ /translation="MVEYAALKFNVASIPMSESPKKVIVGMSGGVDSSVSAWLLQQQG
+ YQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFL
+ EEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRVDINGKSRLLRGL
+ DGNKDQSYFLYTLGHEQIAQSLFPVGELEKPQVRKIAEDLGLITAKKKDSTGICFIGE
+ RKFRDFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKDGSEDPWYV
+ VDKDVENNVLIVAQGHEHPRLMSSGLIAQQLHWVDREPFTGTLSCTVKTRYRQTDIPC
+ TINALDDDRIEVIFDEPVAAVTPGQSAVFYSGEVCLGGGIIEQRLPLTV"
+ misc_feature 1686277..1687293
+ /gene="mnmA"
+ /locus_tag="SARI_01756"
+ /note="tRNA methyl transferase. This family represents
+ tRNA(5-methylaminomethyl-2-thiouridine)-methyltransferase
+ which is involved in the biosynthesis of the modified
+ nucleoside 5-methylaminomethyl-2-thiouridine present in
+ the wobble position of some tRNAs; Region: tRNA_Me_trans;
+ cd01998"
+ /db_xref="CDD:238956"
+ misc_feature 1686277..1687293
+ /gene="mnmA"
+ /locus_tag="SARI_01756"
+ /note="tRNA
+ (5-methylaminomethyl-2-thiouridylate)-methyltransferase;
+ Region: trmU; TIGR00420"
+ /db_xref="CDD:232968"
+ unsure 1687067..1687194
+ /gene="mnmA"
+ /locus_tag="SARI_01756"
+ /note="Sequence derived from one plasmid subclone"
+ gene 1687401..1688048
+ /locus_tag="SARI_01757"
+ CDS 1687401..1688048
+ /locus_tag="SARI_01757"
+ /inference="protein motif:HMMPfam:IPR007451"
+ /inference="similar to AA sequence:INSD:AAL20162.1"
+ /note="HflD; UPF0274; in Escherichia coli this protein is
+ peripherally associated with the membrane and appears to
+ act with lambda CII protein; in Haemophilus influenzae a
+ knockout of the HI0638 gene affected paracytosis"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570785.1"
+ /db_xref="GI:161503673"
+ /db_xref="InterPro:IPR007451"
+ /translation="MIVAKNYYDITLALSGICQSARLVQQVAHQGHCDADALHVSLNS
+ VIDMNPSSTLGVFGSSEANLRLGLETLLGVLNASSRQGLNAELTRYTLSLMVLERKLS
+ STKGALNTLGDRINGLQRQLDHFDLQSDTLMNAMAGIYVDVISPLGPRIQVTGSPAVL
+ QSPQVQAKVRASLLAGIRAAVLWHQVGGGRLQLMFSRHRLTTQAKQILAHLTPEL"
+ misc_feature 1687410..1688033
+ /locus_tag="SARI_01757"
+ /note="putative lysogenization regulator; Reviewed;
+ Region: PRK00218"
+ /db_xref="CDD:234690"
+ unsure 1687420..1687431
+ /locus_tag="SARI_01757"
+ /note="Sequence derived from one plasmid subclone"
+ gene 1688052..1689422
+ /locus_tag="SARI_01758"
+ CDS 1688052..1689422
+ /locus_tag="SARI_01758"
+ /inference="protein motif:FPrintScan:IPR000362"
+ /inference="protein motif:HMMPfam:IPR000362"
+ /inference="protein motif:HMMPfam:IPR013539"
+ /inference="protein motif:HMMTigr:IPR004769"
+ /inference="protein motif:ScanRegExp:IPR000362"
+ /inference="protein motif:superfamily:IPR008948"
+ /inference="similar to AA sequence:REFSEQ:YP_216170.1"
+ /note="Catalyzes two discrete reactions in the de novo
+ synthesis of purines: the cleavage of adenylosuccinate and
+ succinylaminoimidazole carboxamide ribotide"
+ /codon_start=1
+ /transl_table=11
+ /product="adenylosuccinate lyase"
+ /protein_id="YP_001570786.1"
+ /db_xref="GI:161503674"
+ /db_xref="InterPro:IPR000362"
+ /db_xref="InterPro:IPR004769"
+ /db_xref="InterPro:IPR008948"
+ /db_xref="InterPro:IPR013539"
+ /translation="MELSSLTAVSPVDGRYGDKVSALRGIFSEYGLLKFRVQVEVRWL
+ QKLAAHAAIKEVPAFAADANGYLDTLVANFNEDDAVRIKTIERTTNHDVKAVEYFLKE
+ KVAAIPALHAVSEFIHFACTSEDINNLSHALMLKTARDEVILPYWRQVINAIKDLATQ
+ YRDIPLLSRTHGQPATPSTLGKEMANVAYRMERQFRQLNQVEILGKINGAVGNYNAHI
+ AAYPEVDWHQFSEEFVTSLGIQWNPYTTQIEPHDYIAELFDCIARFNTILIDFDRDVW
+ GYIALNHFKQKTIAGEIGSSTMPHKVNPIDFENSEGNLGLSNAVLQHLANKLPVSRWQ
+ RDLTDSTVLRNLGVGIGYALIAYQSTLKGISKLEVNRDRLLDELDHNWEVLAEPIQTV
+ MRRYSIEKPYEKLKELTRGKRVDAEGMKQFIDSLPLPEAEKTRLKAMTPANYIGHAVT
+ LVDELK"
+ misc_feature 1688052..1689419
+ /locus_tag="SARI_01758"
+ /note="adenylosuccinate lyase; Provisional; Region:
+ PRK09285"
+ /db_xref="CDD:236452"
+ misc_feature 1688118..1689389
+ /locus_tag="SARI_01758"
+ /note="PurB_like adenylosuccinases (adenylsuccinate lyase,
+ ASL); Region: PurB; cd01598"
+ /db_xref="CDD:176470"
+ misc_feature order(1688133..1688138,1688325..1688327,1688352..1688354,
+ 1688397..1688402,1688406..1688411,1688556..1688573,
+ 1688577..1688579,1688595..1688600,1688607..1688609,
+ 1688616..1688621,1688637..1688642,1688688..1688699,
+ 1688706..1688708,1688775..1688777,1688781..1688786,
+ 1688805..1688807,1688817..1688819,1688838..1688840,
+ 1688859..1688861,1688871..1688873,1688877..1688882,
+ 1688886..1688891,1688955..1688960,1688973..1688975,
+ 1688985..1688987,1688994..1688999,1689003..1689008,
+ 1689015..1689020,1689027..1689032,1689042..1689062,
+ 1689072..1689077,1689081..1689083,1689096..1689098,
+ 1689384..1689386)
+ /locus_tag="SARI_01758"
+ /note="tetramer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:176470"
+ misc_feature order(1688322..1688324,1688403..1688405,1688562..1688564,
+ 1688790..1688792,1688952..1688954,1688958..1688960,
+ 1688973..1688975)
+ /locus_tag="SARI_01758"
+ /note="active site"
+ /db_xref="CDD:176470"
+ gene 1689546..1690220
+ /locus_tag="SARI_01759"
+ CDS 1689546..1690220
+ /locus_tag="SARI_01759"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:BlastProDom:IPR001867"
+ /inference="protein motif:HMMPfam:IPR001789"
+ /inference="protein motif:HMMPfam:IPR001867"
+ /inference="protein motif:HMMSmart:IPR001789"
+ /inference="protein motif:superfamily:IPR011006"
+ /inference="similar to AA sequence:INSD:AAL20160.1"
+ /note="response regulator in two-component regulatory
+ system with PhoQ; involved in magnesium starvation and
+ stress"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional regulator PhoP"
+ /protein_id="YP_001570787.1"
+ /db_xref="GI:161503675"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR001867"
+ /db_xref="InterPro:IPR011006"
+ /translation="MMRVLVVEDNALLRHHLKVQLQDSGHQVDAAEDAREADYYLNEH
+ LPDIAIIDLGLPDEDGLSLIRRWRSSDVLLPVLVLTAREGWQDKVEVLSSGADDYVTK
+ PFHIEEVMARMQALMRRNSGLASQVINIPPFQVDLSRRELSVNEEIIKLTAFEYTIME
+ TLIRNNGKVVSKDSLMLQLYPDAELRESHTIDVLMGRLRKKIQAQYPHDVITTVRGQG
+ YLFELR"
+ misc_feature 1689549..1690217
+ /locus_tag="SARI_01759"
+ /note="DNA-binding transcriptional regulator PhoP;
+ Provisional; Region: PRK10816"
+ /db_xref="CDD:182755"
+ misc_feature 1689558..1689896
+ /locus_tag="SARI_01759"
+ /note="Signal receiver domain; originally thought to be
+ unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
+ recently identified in eukaroytes ETR1 Arabidopsis
+ thaliana; this domain receives the signal from the sensor
+ partner in a two-component systems; Region: REC; cd00156"
+ /db_xref="CDD:238088"
+ misc_feature order(1689567..1689572,1689699..1689701,1689723..1689725,
+ 1689783..1689785,1689840..1689842,1689849..1689854)
+ /locus_tag="SARI_01759"
+ /note="active site"
+ /db_xref="CDD:238088"
+ misc_feature 1689699..1689701
+ /locus_tag="SARI_01759"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238088"
+ misc_feature order(1689708..1689713,1689717..1689725)
+ /locus_tag="SARI_01759"
+ /note="intermolecular recognition site; other site"
+ /db_xref="CDD:238088"
+ misc_feature 1689849..1689857
+ /locus_tag="SARI_01759"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238088"
+ misc_feature 1689927..1690208
+ /locus_tag="SARI_01759"
+ /note="Effector domain of response regulator. Bacteria and
+ certain eukaryotes like protozoa and higher plants use
+ two-component signal transduction systems to detect and
+ respond to changes in the environment. The system consists
+ of a sensor histidine kinase and...; Region: trans_reg_C;
+ cd00383"
+ /db_xref="CDD:238225"
+ misc_feature order(1689999..1690001,1690056..1690061,1690113..1690115,
+ 1690122..1690124,1690146..1690151,1690182..1690184,
+ 1690197..1690199)
+ /locus_tag="SARI_01759"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:238225"
+ gene 1690220..1691683
+ /locus_tag="SARI_01760"
+ CDS 1690220..1691683
+ /locus_tag="SARI_01760"
+ /inference="protein motif:Gene3D:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003660"
+ /inference="protein motif:HMMPfam:IPR003661"
+ /inference="protein motif:HMMSmart:IPR003594"
+ /inference="protein motif:superfamily:IPR003594"
+ /inference="protein motif:superfamily:IPR009082"
+ /inference="similar to AA sequence:INSD:AAL20159.1"
+ /note="'KEGG: spt:SPA1620 3.2e-254 phoQ; sensor protein
+ PhoQ, regulator of virulence determinants K07637;
+ COG: COG0642 Signal transduction histidine kinase;
+ Psort location: endoplasmic reticulum, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="sensor protein PhoQ"
+ /protein_id="YP_001570788.1"
+ /db_xref="GI:161503676"
+ /db_xref="InterPro:IPR003594"
+ /db_xref="InterPro:IPR003660"
+ /db_xref="InterPro:IPR003661"
+ /db_xref="InterPro:IPR009082"
+ /translation="MNKFARHFLPLSLRVRFLLATAGVVLVLSLAYGMVALVGYSVSF
+ DKTTFRLLRGESNLFYTLAKWENNKISVELPANLDMQSPTMTLIYDETGKLLWTQRDI
+ PWLIKSIQPEWLKTNGFHEIETNVNATSTLLSDDHSAQEKLKEVREDDDDAEMTHSVA
+ VNIYPATARMPQLTIVVVDTIPIELKRSYMVWSWFVYVLAANLLLVIPLLWIAAWWSL
+ RPIEALAREVRELEDHHREMLNPDTTRELTSLVRNLNQLLKSERERYNKYRTTLTDLT
+ HSLKTPLAVLQSTLRSLRNEKISVRKAEPVMLEQISRISQQIGYYLHRASMRGSGVLL
+ SRELHPVAPLLDNLISALNKVYQRKGVNISMDISPEISFVGEQNDFVEVMGNVLDNAC
+ KYCLEFVEISARQTDDYLHIFVEDDGPGIPHSKRSLVFDRGQRADTLRPGQGVGLAVA
+ REITEQYAGQIIASDSLLGGARMEVVFGRQHPTQKEE"
+ misc_feature 1690226..1691677
+ /locus_tag="SARI_01760"
+ /note="sensor protein PhoQ; Provisional; Region: PRK10815"
+ /db_xref="CDD:182754"
+ misc_feature 1690247..1690789
+ /locus_tag="SARI_01760"
+ /note="PhoQ Sensor; Region: PhoQ_Sensor; pfam08918"
+ /db_xref="CDD:149855"
+ misc_feature 1691033..1691203
+ /locus_tag="SARI_01760"
+ /note="His Kinase A (phospho-acceptor) domain; Region:
+ HisKA; pfam00512"
+ /db_xref="CDD:215963"
+ misc_feature 1691366..1691650
+ /locus_tag="SARI_01760"
+ /note="Histidine kinase-like ATPases; This family includes
+ several ATP-binding proteins for example: histidine
+ kinase, DNA gyrase B, topoisomerases, heat shock protein
+ HSP90, phytochrome-like ATPases and DNA mismatch repair
+ proteins; Region: HATPase_c; cd00075"
+ /db_xref="CDD:238030"
+ misc_feature order(1691375..1691377,1691387..1691389,1691396..1691398,
+ 1691459..1691461,1691465..1691467,1691471..1691473,
+ 1691477..1691482,1691549..1691560,1691606..1691608,
+ 1691612..1691614,1691627..1691632,1691636..1691638)
+ /locus_tag="SARI_01760"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature 1691387..1691389
+ /locus_tag="SARI_01760"
+ /note="Mg2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature order(1691471..1691473,1691477..1691479,1691549..1691551,
+ 1691555..1691557)
+ /locus_tag="SARI_01760"
+ /note="G-X-G motif; other site"
+ /db_xref="CDD:238030"
+ gene 1691764..1692885
+ /locus_tag="SARI_01761"
+ CDS 1691764..1692885
+ /locus_tag="SARI_01761"
+ /inference="protein motif:HMMPanther:IPR013109"
+ /inference="protein motif:HMMPfam:IPR013109"
+ /inference="protein motif:HMMSmart:IPR003347"
+ /inference="similar to AA sequence:REFSEQ:YP_150860.1"
+ /note="'COG: COG2850 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570789.1"
+ /db_xref="GI:161503677"
+ /db_xref="InterPro:IPR003347"
+ /db_xref="InterPro:IPR013109"
+ /translation="MEYQLTLNWPDFLECHWQKRPVVLKRGFTNFIDPLSPDELAGLA
+ MESEIDSRLVSHQDGKWQVRHGPFESYDHLGESNWSLLVQAVNHWHEPTAALMRPFRA
+ LPDWRIDDLMISFSVPGGGVGPHLDQYDVFIIQGTGRRRWRVGEKLQMRQHCPHPDLL
+ QVDPFDAIIDEELEPGDILYIPPGFPHEGYALENAMNYSVGFRAPNTRELISGFADYV
+ LQRELGNTYYSDPDMPSRKHPADILPQEMDKLRNMMLDLINQPAHFQQWLGEFISQSR
+ HELDIAPPEPPYQPDEIYDALKQGEVLVRLGGLRVLRIGDDVYANGEKIDSPHRPALE
+ ALASHIVLTAENFDDALEDPSFLAMLAALINSGYWFFEG"
+ misc_feature 1691764..1692882
+ /locus_tag="SARI_01761"
+ /note="Uncharacterized conserved protein [Function
+ unknown]; Region: COG2850"
+ /db_xref="CDD:225406"
+ misc_feature <1692115..>1692324
+ /locus_tag="SARI_01761"
+ /note="Cupin domain; Region: Cupin_2; cl17218"
+ /db_xref="CDD:247772"
+ gene complement(1692991..1694217)
+ /locus_tag="SARI_01762"
+ CDS complement(1692991..1694217)
+ /locus_tag="SARI_01762"
+ /inference="protein motif:HMMPfam:IPR002933"
+ /inference="protein motif:HMMPfam:IPR011650"
+ /inference="protein motif:HMMTigr:IPR010161"
+ /inference="protein motif:ScanRegExp:IPR001261"
+ /inference="similar to AA sequence:INSD:AAX65084.1"
+ /note="catalyzes the release of the N-terminal amino acid
+ from a tripeptide"
+ /codon_start=1
+ /transl_table=11
+ /product="peptidase T"
+ /protein_id="YP_001570790.1"
+ /db_xref="GI:161503678"
+ /db_xref="InterPro:IPR001261"
+ /db_xref="InterPro:IPR002933"
+ /db_xref="InterPro:IPR010161"
+ /db_xref="InterPro:IPR011650"
+ /translation="MDKLLERFLHYVSLDTQSKSGVRQVPSTEGQWKLLRLLKQQLEE
+ MGLVNITLSEKGTLMATLPANVEGDIPAIGFISHVDTSPDFSGKNVTPQIVENYRGGD
+ IALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGVAEIMTALAVLKGNNI
+ PHGEIKVAFTPDEEVGKGAKHFDVEAFGAQWAYTVDGGGVGELEFENFNAASVNIKIV
+ GNNVHPGTAKGVMVNALSLAARIHAEVPVDEAPETTEGYEGFYHLASMKGTVDRADMH
+ YIIRDFDRKQFEARKRKMMEIAKKVGKGLHPDCYIELVIEDSYYNMREKVVEHPHILD
+ IAQQAMRDCDITPEMKPIRGGTDGAQLSFMGLPCPNLFTGGYNYHGKHEFVTLEGMEK
+ AVQVIVRIAELTAKQQ"
+ misc_feature complement(1692997..1694217)
+ /locus_tag="SARI_01762"
+ /note="Di- and tripeptidases [Amino acid transport and
+ metabolism]; Region: PepD; COG2195"
+ /db_xref="CDD:225106"
+ misc_feature complement(1693009..1694208)
+ /locus_tag="SARI_01762"
+ /note="M20 Peptidase T specifically cleaves tripeptides;
+ Region: M20_peptT; cd03892"
+ /db_xref="CDD:193512"
+ misc_feature complement(order(1693081..1693083,1693630..1693632,
+ 1693696..1693701,1693798..1693800,1693984..1693986))
+ /locus_tag="SARI_01762"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:193512"
+ misc_feature complement(order(1693081..1693083,1693159..1693161,
+ 1693408..1693434,1693438..1693440,1693453..1693467,
+ 1693492..1693494,1693501..1693503,1693510..1693515,
+ 1693519..1693521,1693525..1693527,1693531..1693539,
+ 1693543..1693551,1693966..1693968))
+ /locus_tag="SARI_01762"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:193512"
+ gene 1694468..1695604
+ /gene="potA"
+ /locus_tag="SARI_01763"
+ CDS 1694468..1695604
+ /gene="potA"
+ /locus_tag="SARI_01763"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMPfam:IPR013611"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR005893"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="protein motif:superfamily:IPR008995"
+ /inference="similar to AA sequence:SwissProt:Q5PMK1"
+ /note="functions together with PotBCD (A2BCD) in
+ ATP-dependent polyamine transport; PotA is the
+ membrane-associated ATPase"
+ /codon_start=1
+ /transl_table=11
+ /product="putrescine/spermidine ABC transporter ATPase
+ protein"
+ /protein_id="YP_001570791.1"
+ /db_xref="GI:161503679"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR005893"
+ /db_xref="InterPro:IPR008995"
+ /db_xref="InterPro:IPR013611"
+ /translation="MGQNKKLNKQPRSLSPLVLLSGISKSFDGKEVISQLDLTINNGE
+ FLTLLGPSGCGKTTVLRLIAGLETVDAGHIMLDNQDITHVPAENRYVNTVFQSYALFP
+ HMTVFENVAFGLRMQKTPAAGIASRVTDALRMVQLEEFAQRKPHQLSGGQQQRVAIAR
+ AVVNKPRLLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRI
+ VVMRNGVIEQDGTPREIYEEPKNLFVAGFIGEINRFDATVIERLDEQRVRARVEGREC
+ NIYVNFAVEPGQKLNVLLRPEDLRVDEINDDNHIEGLIGYVRERNYKGMTLESVVELE
+ NGKMVMVSEFFNEDDPDFDHSLNQKMAINWVESWEVVLADEEHK"
+ misc_feature 1694480..1695601
+ /gene="potA"
+ /locus_tag="SARI_01763"
+ /note="putrescine/spermidine ABC transporter ATPase
+ protein; Reviewed; Region: potA; PRK09452"
+ /db_xref="CDD:236523"
+ misc_feature 1694519..1695214
+ /gene="potA"
+ /locus_tag="SARI_01763"
+ /note="ATP-binding cassette transporter nucleotide-binding
+ domain; Region: ABC_ATPase; cl17201"
+ /db_xref="CDD:247755"
+ misc_feature 1694615..1694638
+ /gene="potA"
+ /locus_tag="SARI_01763"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature order(1694624..1694629,1694633..1694641,1694753..1694755,
+ 1694981..1694986,1695083..1695085)
+ /gene="potA"
+ /locus_tag="SARI_01763"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213179"
+ misc_feature 1694744..1694755
+ /gene="potA"
+ /locus_tag="SARI_01763"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213179"
+ misc_feature 1694909..1694938
+ /gene="potA"
+ /locus_tag="SARI_01763"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213179"
+ misc_feature 1694969..1694986
+ /gene="potA"
+ /locus_tag="SARI_01763"
+ /note="Walker B; other site"
+ /db_xref="CDD:213179"
+ misc_feature 1694993..1695004
+ /gene="potA"
+ /locus_tag="SARI_01763"
+ /note="D-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature 1695071..1695091
+ /gene="potA"
+ /locus_tag="SARI_01763"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213179"
+ misc_feature 1695341..>1695526
+ /gene="potA"
+ /locus_tag="SARI_01763"
+ /note="TOBE domain; Region: TOBE_2; pfam08402"
+ /db_xref="CDD:219823"
+ gene 1695588..1696451
+ /gene="potB"
+ /locus_tag="SARI_01764"
+ CDS 1695588..1696451
+ /gene="potB"
+ /locus_tag="SARI_01764"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="similar to AA sequence:INSD:AAO69320.1"
+ /note="can transport spermidine and putrescine but
+ affinity is higher for spermidine; forms a complex of
+ PotA2BCD; PotB is a membrane component"
+ /codon_start=1
+ /transl_table=11
+ /product="spermidine/putrescine ABC transporter membrane
+ protein"
+ /protein_id="YP_001570792.1"
+ /db_xref="GI:161503680"
+ /db_xref="InterPro:IPR000515"
+ /translation="MKNTSKFQNIVIVTIVGWLVLFVFLPNLMIIGTSFLTRDDARFV
+ KMVFTLDNYARLLDPLYFEVLLHSLNMALIATLACLVLGYPFAWFLAKLPEKIRPLLL
+ FLLIVPFWTNSLIRIYGLKIFLSTKGYLNEFLLWLGVIDTPIRIMFTPSAVIIGLVYI
+ LLPFMVMPLYSSIEKLDKPLLEAARDLGASKMQTFIRIIIPLTMPGIVAGCLLVMLPA
+ MGLFYVSDLMGGAKNLLIGNVIKVQFLNIRDWPFGAATSITLTIVMGLMLLIYWRASR
+ LLNKKVSDISD"
+ misc_feature 1695588..1696427
+ /gene="potB"
+ /locus_tag="SARI_01764"
+ /note="ABC-type sugar transport system, permease component
+ [Carbohydrate transport and metabolism]; Region: UgpE;
+ COG0395"
+ /db_xref="CDD:223472"
+ misc_feature 1695780..1696379
+ /gene="potB"
+ /locus_tag="SARI_01764"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature order(1695828..1695833,1695840..1695845,1695858..1695860,
+ 1695888..1695899,1695903..1695932,1695939..1695944,
+ 1695987..1695989,1696062..1696067,1696071..1696073,
+ 1696077..1696079,1696086..1696091,1696095..1696097,
+ 1696107..1696112,1696119..1696121,1696170..1696172,
+ 1696212..1696217,1696224..1696226,1696245..1696256,
+ 1696263..1696268,1696299..1696304,1696332..1696337,
+ 1696344..1696349,1696353..1696358,1696365..1696370,
+ 1696377..1696379)
+ /gene="potB"
+ /locus_tag="SARI_01764"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(1695906..1695947,1695987..1695989,1696245..1696262)
+ /gene="potB"
+ /locus_tag="SARI_01764"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(1695987..1695989,1696047..1696049,1696263..1696265,
+ 1696293..1696295,1696302..1696304,1696332..1696334)
+ /gene="potB"
+ /locus_tag="SARI_01764"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(1696122..1696160,1696176..1696181,1696191..1696193)
+ /gene="potB"
+ /locus_tag="SARI_01764"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene complement(1696493..1696672)
+ /locus_tag="SARI_01765"
+ CDS complement(1696493..1696672)
+ /locus_tag="SARI_01765"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570793.1"
+ /db_xref="GI:161503681"
+ /translation="MRLAISIIPDKFIYKRITAYDSSDIGKSMPVVDDDVRLQYWLQL
+ AFMRFLWRGMKFAFE"
+ gene 1696773..1697783
+ /gene="sifA"
+ /locus_tag="SARI_01766"
+ CDS 1696773..1697783
+ /gene="sifA"
+ /locus_tag="SARI_01766"
+ /inference="protein motif:HMMPfam:IPR010637"
+ /inference="similar to AA sequence:INSD:AAL38931.1"
+ /note="translocated by the type III secretion system
+ SPI-2; required for the formation of lysosomal
+ glycoprotein structures (Sifs); required for maintenance
+ of membrane in the Salmonella-containing vacuole; a
+ cysteine residue with CAAX motif is modified by isoprenoid
+ addition of protein geranylgeranyl transferase I; also
+ modified by S-acylation"
+ /codon_start=1
+ /transl_table=11
+ /product="secreted effector protein"
+ /protein_id="YP_001570794.1"
+ /db_xref="GI:161503682"
+ /db_xref="InterPro:IPR010637"
+ /translation="MPITIGNGYLKSEIFINAPSKTREPWWKALWEALKDLFFSTGRA
+ KADSYIHEMFFSDPPPTRERLADIFFELKGLACPSHKERFQVYNPHEDDSTIIYHILD
+ ENGKDELLCIIQNTDTVHCKAMGNSYFAVREQPVCLKSYPQMTYTVNKKYSEIVESSL
+ PSTLCLKLAGTPFLSVPLNNIVKYLYSELDNRNLDKWKTQEKANYLAEKIRSGIEKAM
+ RILYHADISESMQQRAFLETMSMCGLKSTETSPPPTHIPIVKIVQEVLLADKKFKRFL
+ ATDTNASQSMLAEIIEIVSDGVFRALFRTDPQAIQKMAEEQLTTLHVRSDQQDGRLGG
+ FL"
+ misc_feature 1696773..1697780
+ /gene="sifA"
+ /locus_tag="SARI_01766"
+ /note="Sif protein; Region: Sif; pfam06767"
+ /db_xref="CDD:148397"
+ gene 1698083..1698226
+ /locus_tag="SARI_01767"
+ CDS 1698083..1698226
+ /locus_tag="SARI_01767"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570795.1"
+ /db_xref="GI:161503683"
+ /translation="MTSGGSLFSLAANNRETFWRDFGEEKKLIIFNTLKASHPLNKKV
+ ELE"
+ gene 1698223..1699002
+ /gene="potC"
+ /locus_tag="SARI_01768"
+ CDS 1698223..1699002
+ /gene="potC"
+ /locus_tag="SARI_01768"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="similar to AA sequence:INSD:AAL38932.1"
+ /note="can transport spermidine and putrescine but
+ affinity is higher for spermidine; forms a complex of
+ PotA2BCD; PotC is a membrane component"
+ /codon_start=1
+ /transl_table=11
+ /product="spermidine/putrescine ABC transporter membrane
+ protein"
+ /protein_id="YP_001570796.1"
+ /db_xref="GI:161503684"
+ /db_xref="InterPro:IPR000515"
+ /translation="MIGRLLRGGFMTAIYAYLYIPIIILIVNSFNSSRFGINWQGFTT
+ KWYEHLISNDSLLQAAQHSLTMAIFSATFATVIGSLTAVALYRYRFRGKPFVSGMLFV
+ VMMSPDIVMAISLLVLFMLLGIQLGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLE
+ AAKDLGASEVTILRKIILPLAMPAVAAGWLLSFTLSMDDVVVSSFVTGPGYEILPLKI
+ YSMVKVGVSPEVNALATILLVLSLVMVIASQLIARDKTKGR"
+ misc_feature 1698301..1698999
+ /gene="potC"
+ /locus_tag="SARI_01768"
+ /note="ABC-type spermidine/putrescine transport system,
+ permease component II [Amino acid transport and
+ metabolism]; Region: PotC; COG1177"
+ /db_xref="CDD:224098"
+ misc_feature 1698400..1698957
+ /gene="potC"
+ /locus_tag="SARI_01768"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature order(1698448..1698453,1698460..1698465,1698478..1698480,
+ 1698508..1698519,1698523..1698552,1698559..1698564,
+ 1698568..1698570,1698628..1698630,1698634..1698636,
+ 1698640..1698642,1698646..1698648,1698655..1698660,
+ 1698664..1698666,1698676..1698681,1698688..1698690,
+ 1698739..1698741,1698781..1698786,1698793..1698795,
+ 1698814..1698825,1698832..1698837,1698874..1698879,
+ 1698907..1698912,1698919..1698924,1698928..1698933,
+ 1698940..1698945,1698952..1698957)
+ /gene="potC"
+ /locus_tag="SARI_01768"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(1698526..1698570,1698814..1698831)
+ /gene="potC"
+ /locus_tag="SARI_01768"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(1698568..1698570,1698613..1698615,1698832..1698834,
+ 1698868..1698870,1698877..1698879,1698907..1698909)
+ /gene="potC"
+ /locus_tag="SARI_01768"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(1698691..1698729,1698745..1698750,1698760..1698762)
+ /gene="potC"
+ /locus_tag="SARI_01768"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene 1699027..1700073
+ /gene="potD"
+ /locus_tag="SARI_01769"
+ CDS 1699027..1700073
+ /gene="potD"
+ /locus_tag="SARI_01769"
+ /inference="protein motif:BlastProDom:IPR011587"
+ /inference="protein motif:HMMPfam:IPR006059"
+ /inference="similar to AA sequence:INSD:AAV77555.1"
+ /note="can transport spermidine and putrescine but
+ affinity is higher for spermidine; forms a complex of
+ PotA2BCD; PotD is a periplasmic component that binds the
+ substrate"
+ /codon_start=1
+ /transl_table=11
+ /product="spermidine/putrescine ABC transporter
+ periplasmic substrate-binding protein"
+ /protein_id="YP_001570797.1"
+ /db_xref="GI:161503685"
+ /db_xref="InterPro:IPR006059"
+ /db_xref="InterPro:IPR011587"
+ /translation="MKKWSRHLLAAGALALGMSAAHADDNNTLYFYNWTEYVPPGLLE
+ QFTKETGIKVIYSTYESNETMYAKLKTYKDGAYDLVVPSTYYVDKMRKEGMIQKIDKS
+ KLTNFHNLDPEMLNKPFDPNNDYSVPYIWGATAIGVNSDAIDPKTITSWADLWKPEYK
+ NSLLLTDDAREVFQMALRKLGYSGNTTDPKEIKAAYEELKKLMPNVAAFNSDNPANPY
+ MEGEVSLGMVWNGSAFVARQAGTPLEVVWPKEGGIFWMDSLAIPANAKNKEGALKLIN
+ FLLRPDVAKEVAETIGYPTPNLAARKLLSPELASDKSLYPDAQTISKGEWQNDVGDAS
+ AIYEEYYQKLKAGR"
+ misc_feature 1699027..1700070
+ /gene="potD"
+ /locus_tag="SARI_01769"
+ /note="spermidine/putrescine ABC transporter periplasmic
+ substrate-binding protein; Reviewed; Region: potD;
+ PRK09501"
+ /db_xref="CDD:181913"
+ misc_feature 1699255..1699926
+ /gene="potD"
+ /locus_tag="SARI_01769"
+ /note="Bacterial extracellular solute-binding protein;
+ Region: SBP_bac_6; pfam13343"
+ /db_xref="CDD:222057"
+ gene complement(1700155..1700868)
+ /locus_tag="SARI_01770"
+ CDS complement(1700155..1700868)
+ /locus_tag="SARI_01770"
+ /inference="protein motif:HMMPanther:IPR003000"
+ /inference="protein motif:HMMPfam:IPR003000"
+ /inference="similar to AA sequence:INSD:CAD08345.1"
+ /note="'KEGG: stt:t1699 1.4e-125 cobB; putative regulatory
+ protein K01463;
+ COG: COG0846 NAD-dependent protein deacetylases, SIR2
+ family;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570798.1"
+ /db_xref="GI:161503686"
+ /db_xref="InterPro:IPR003000"
+ /translation="MMENPRVLVLTGAGISAESGIRTFRAADGLWEEHRVEDVATPEG
+ FARNPALVQTFYNVRRQQLQQPEIQPNAAHLALAKLEEALGDRFLLVTQNIDNLHERA
+ GNRNIIHMHGELLKVRCSQSGQILEWDGDVMPEDKCHCCQFPAPLRPHVVWFGEMPLG
+ MDEIYMALSMADIFIAIGTSGHVYPAAGFVHEAKLHGAHTVELNLEPSQVGSEFEEKH
+ YGPASQVVPEFVDNLLKGL"
+ misc_feature complement(1700164..1700868)
+ /locus_tag="SARI_01770"
+ /note="NAD-dependent deacetylase; Provisional; Region:
+ PRK00481"
+ /db_xref="CDD:234777"
+ misc_feature complement(1700179..1700856)
+ /locus_tag="SARI_01770"
+ /note="SIRT5_Af1_CobB: Eukaryotic, archaeal and
+ prokaryotic group (class3) which includes human sirtuin
+ SIRT5, Archaeoglobus fulgidus Sir2-Af1, and E. coli CobB;
+ and are members of the SIR2 family of proteins, silent
+ information regulator 2 (Sir2) enzymes which...; Region:
+ SIRT5_Af1_CobB; cd01412"
+ /db_xref="CDD:238703"
+ misc_feature complement(order(1700206..1700208,1700251..1700256,
+ 1700320..1700322,1700335..1700337,1700536..1700538,
+ 1700581..1700583,1700587..1700592,1700647..1700649,
+ 1700794..1700799,1700818..1700823,1700827..1700829))
+ /locus_tag="SARI_01770"
+ /note="NAD+ binding site [chemical binding]; other site"
+ /db_xref="CDD:238703"
+ misc_feature complement(order(1700317..1700325,1700398..1700409,
+ 1700413..1700415,1700536..1700538,1700584..1700586))
+ /locus_tag="SARI_01770"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:238703"
+ misc_feature complement(order(1700446..1700448,1700455..1700457,
+ 1700503..1700505,1700512..1700514))
+ /locus_tag="SARI_01770"
+ /note="Zn binding site [ion binding]; other site"
+ /db_xref="CDD:238703"
+ gene complement(1700993..1701904)
+ /locus_tag="SARI_01771"
+ CDS complement(1700993..1701904)
+ /locus_tag="SARI_01771"
+ /inference="protein motif:HMMPfam:IPR000600"
+ /inference="protein motif:ScanRegExp:IPR000600"
+ /inference="similar to AA sequence:REFSEQ:YP_150869.1"
+ /note="catalyzes the formation of
+ N-acetyl-D-glucosamine-6-phosphate from
+ N-acetyl-D-glucosamine"
+ /codon_start=1
+ /transl_table=11
+ /product="N-acetyl-D-glucosamine kinase"
+ /protein_id="YP_001570799.1"
+ /db_xref="GI:161503687"
+ /db_xref="InterPro:IPR000600"
+ /translation="MFYGFDIGGTKIALGVFDSTRRLQWEKRVPTPHTSYSAFLDAVC
+ ELVAEADLRFGVKGAVGIGIPGMPETEDGTLYAANVPAASGKPLRADLSARLERDVRL
+ DNDANCFALSEAWDDEFTQYPLVMGLILGTGVGGGLVLNGKPITGQSYITGEFGHMRL
+ PVDALTLMGFDFPLRRCGCGQMGCIENYLSGRGFAWLYQHYYHQSLQAPEIIALWEQG
+ DKQAHAHVERYLDLLAVCLGNILTIVDPCLLVIGGGLSNFTAITTQLSERLPRHLLPV
+ ARVPRIERARHGDAGGMRGAAFLHLTD"
+ misc_feature complement(1701008..1701904)
+ /locus_tag="SARI_01771"
+ /note="fructokinase; Reviewed; Region: PRK09557"
+ /db_xref="CDD:236565"
+ misc_feature complement(<1701551..1701895)
+ /locus_tag="SARI_01771"
+ /note="Nucleotide-Binding Domain of the sugar
+ kinase/HSP70/actin superfamily; Region:
+ NBD_sugar-kinase_HSP70_actin; cd00012"
+ /db_xref="CDD:212657"
+ misc_feature complement(order(1701590..1701592,1701866..1701868,
+ 1701872..1701874,1701878..1701889))
+ /locus_tag="SARI_01771"
+ /note="nucleotide binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:212657"
+ gene complement(1701933..1703177)
+ /locus_tag="SARI_01772"
+ CDS complement(1701933..1703177)
+ /locus_tag="SARI_01772"
+ /inference="protein motif:HMMPfam:IPR003838"
+ /inference="protein motif:HMMTigr:IPR011925"
+ /inference="protein motif:HMMTigr:IPR011926"
+ /inference="protein motif:superfamily:IPR009010"
+ /inference="similar to AA sequence:REFSEQ:YP_216156.1"
+ /note="part of the ATP-dependent transport system LolCDE;
+ responsible for the localization of lipoproteins to the
+ periplasmic surface of the outer membrane"
+ /codon_start=1
+ /transl_table=11
+ /product="outer membrane-specific lipoprotein transporter
+ subunit LolE"
+ /protein_id="YP_001570800.1"
+ /db_xref="GI:161503688"
+ /db_xref="InterPro:IPR003838"
+ /db_xref="InterPro:IPR009010"
+ /db_xref="InterPro:IPR011925"
+ /db_xref="InterPro:IPR011926"
+ /translation="MASPLSLLIGLRFSRGRRRGGIVSLISVISTIGIALGVAVLIVG
+ LSAMNGFERELNNRILAVVPHGEIEAVNQPWTNWREALEKVRKVPGIAAAAPYINFTG
+ LVESGANLRAIQVKGVNPKQEQQLSALPSFVQNHAWDHFKAGEQQVIIGKGVADALKV
+ KQGDWVSIMIPNANADHKLLQPKRVRLHVTGILQLSGQLDHSFAMIPLEDAQQYLDMG
+ SSVSGIALKVHDVFNANKLVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAM
+ ILVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLLGSLIG
+ VAIGIVVSLQLTAIINGIEKAIGHQFLSGDIYFIDFLPSELHWLDVVYVLVTALLLSL
+ LASWYPARRASNIDPARVLSGQ"
+ misc_feature complement(1701936..1703096)
+ /locus_tag="SARI_01772"
+ /note="outer membrane-specific lipoprotein transporter
+ subunit LolE; Provisional; Region: PRK11146"
+ /db_xref="CDD:236860"
+ misc_feature complement(1702455..1703096)
+ /locus_tag="SARI_01772"
+ /note="MacB-like periplasmic core domain; Region:
+ MacB_PCD; pfam12704"
+ /db_xref="CDD:221725"
+ misc_feature complement(1701957..1702361)
+ /locus_tag="SARI_01772"
+ /note="FtsX-like permease family; Region: FtsX; pfam02687"
+ /db_xref="CDD:217187"
+ unsure 1703173..1703197
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(1703177..1703878)
+ /gene="lolD"
+ /locus_tag="SARI_01773"
+ CDS complement(1703177..1703878)
+ /gene="lolD"
+ /locus_tag="SARI_01773"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR011924"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:INSD:AAV77559.1"
+ /note="'outer membrane specific; part of transporter
+ complex lolCDE involved in the translocation of mature
+ outer membrane-directed lipoproteins, from the inner
+ membrane to the periplasmic chaperone'"
+ /codon_start=1
+ /transl_table=11
+ /product="lipoprotein transporter ATP-binding subunit"
+ /protein_id="YP_001570801.1"
+ /db_xref="GI:161503689"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR011924"
+ /translation="MNKILLQCDNLCKRYQEGTVQTDVLHDVSFSIGEGEMMAIVGSS
+ GSGKSTLLHLLGGLDTPTSGDVIFSGQPMSKLASAEKAELRNQKLGFIYQFHHLLPDF
+ TALENVAMPLLIGKKRPAEIDARAREMLHAVGLEHRATHRPSELSGGERQRVAIARAL
+ VNNPRLVLADEPTGNLDARNADSIFELLGALNRLQGTAFLVVTHDLQLAKRMSRQLEM
+ RDGRLTAELSLMGAK"
+ misc_feature complement(1703183..1703878)
+ /gene="lolD"
+ /locus_tag="SARI_01773"
+ /note="lipoprotein transporter ATP-binding subunit;
+ Provisional; Region: lolD; PRK11629"
+ /db_xref="CDD:183244"
+ misc_feature complement(1703210..1703863)
+ /gene="lolD"
+ /locus_tag="SARI_01773"
+ /note="ATP-binding cassette domain of the transporters
+ involved in export of lipoprotein and macrolide, and cell
+ division protein; Region: ABC_MJ0796_LolCDE_FtsE; cd03255"
+ /db_xref="CDD:213222"
+ misc_feature complement(1703732..1703755)
+ /gene="lolD"
+ /locus_tag="SARI_01773"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213222"
+ misc_feature complement(order(1703267..1703269,1703366..1703371,
+ 1703597..1703599,1703729..1703737,1703741..1703746))
+ /gene="lolD"
+ /locus_tag="SARI_01773"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213222"
+ misc_feature complement(1703597..1703608)
+ /gene="lolD"
+ /locus_tag="SARI_01773"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213222"
+ misc_feature complement(1703414..1703443)
+ /gene="lolD"
+ /locus_tag="SARI_01773"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213222"
+ misc_feature complement(1703366..1703383)
+ /gene="lolD"
+ /locus_tag="SARI_01773"
+ /note="Walker B; other site"
+ /db_xref="CDD:213222"
+ misc_feature complement(1703348..1703359)
+ /gene="lolD"
+ /locus_tag="SARI_01773"
+ /note="D-loop; other site"
+ /db_xref="CDD:213222"
+ misc_feature complement(1703261..1703281)
+ /gene="lolD"
+ /locus_tag="SARI_01773"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213222"
+ gene complement(1703871..1705070)
+ /locus_tag="SARI_01774"
+ CDS complement(1703871..1705070)
+ /locus_tag="SARI_01774"
+ /inference="protein motif:HMMPfam:IPR003838"
+ /inference="protein motif:HMMTigr:IPR011925"
+ /inference="similar to AA sequence:INSD:AAX65073.1"
+ /note="part of the ATP-dependent transport system LolCDE;
+ responsible for the localization of lipoproteins to the
+ periplasmic surface of the outer membrane"
+ /codon_start=1
+ /transl_table=11
+ /product="outer membrane-specific lipoprotein transporter
+ subunit LolC"
+ /protein_id="YP_001570802.1"
+ /db_xref="GI:161503690"
+ /db_xref="InterPro:IPR003838"
+ /db_xref="InterPro:IPR011925"
+ /translation="MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTV
+ LSVMNGFERELQNNILGLMPQAILSPEHGSLNPNQVPKKDVDLQGVNRIAPLTTGDVV
+ LQSARSVAVGVMLGIDPAQKDPLTPYLVNVKQSELQPGKYNVILGEQLAGQLGVNRGD
+ QIRVMVPSASQFTPMGRLPSQRLFTVIGTFAANSEVDGYEMLVNIQDASRLMRYPAGN
+ ITGWRLWLDEPLKVDTLSQQTLPKGTKWQDWRERKGELFQAVRMEKNMMGLLLSLIVA
+ VAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGALLGAVLGA
+ LLASQLNNLMPVIGAFLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQP
+ AEALRYE"
+ misc_feature complement(1703874..1705070)
+ /locus_tag="SARI_01774"
+ /note="outer membrane-specific lipoprotein transporter
+ subunit LolC; Provisional; Region: PRK10814"
+ /db_xref="CDD:182753"
+ misc_feature complement(1704357..1705040)
+ /locus_tag="SARI_01774"
+ /note="MacB-like periplasmic core domain; Region:
+ MacB_PCD; pfam12704"
+ /db_xref="CDD:221725"
+ misc_feature complement(<1704123..1704266)
+ /locus_tag="SARI_01774"
+ /note="FtsX-like permease family; Region: FtsX; pfam02687"
+ /db_xref="CDD:217187"
+ unsure 1705029..1705084
+ /note="Sequence derived from one plasmid subclone"
+ gene 1705408..1708854
+ /locus_tag="SARI_01775"
+ CDS 1705408..1708854
+ /locus_tag="SARI_01775"
+ /inference="protein motif:HMMPfam:IPR001650"
+ /inference="protein motif:HMMPfam:IPR003711"
+ /inference="protein motif:HMMPfam:IPR005118"
+ /inference="protein motif:HMMPfam:IPR011545"
+ /inference="protein motif:HMMSmart:IPR001650"
+ /inference="protein motif:HMMSmart:IPR014001"
+ /inference="protein motif:HMMTigr:IPR004576"
+ /note="'KEGG: eci:UTI89_C1242 0. mfd; transcription-repair
+ coupling factor; mutation frequency decline K03723;
+ COG: COG1197 Transcription-repair coupling factor
+ (superfamily II helicase);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="transcription-repair coupling factor"
+ /protein_id="YP_001570803.1"
+ /db_xref="GI:161503691"
+ /db_xref="InterPro:IPR001650"
+ /db_xref="InterPro:IPR003711"
+ /db_xref="InterPro:IPR004576"
+ /db_xref="InterPro:IPR005118"
+ /db_xref="InterPro:IPR011545"
+ /db_xref="InterPro:IPR014001"
+ /translation="MPEKQRYTLPTKAGDQRQLGELTGAACATLVAEIAERHVGPVVL
+ IAPDMQNALRLHDEIRQFTDQMVMNLADWETLPYDSFSPHQEIISSRLSTLYQLPSMQ
+ RGVLIVPVNTLMQRVCPHSYLHGHALVMKKGQRLSRDALRAQLDSAGYRHVDQVMEHG
+ EYATRGALLDLFPMGSEQPYRLDFFDDEIDSLRLFDADTQRTLEEVEVINLLPAHEFP
+ TDKAAIELFRSQWRDTFEVKRDAEHIYQQVSKGTLPAGIEYWQPLFFSEPLPPLFSYF
+ PANTLVVNTGSLETSAERFQADTLARFENRGVDPMRPLLPPEALWLRVDELFSELKRW
+ PRLQLKTDHLPEKTANTNLGFQKLPDLAIQAQQKAPLDALRKFLESFSGPVIFSVESE
+ GRREALGELLARIKIAPKRILRLDDARDAGRYLMIGAAEHGFIDTQRNLALICESDLL
+ GERVARRRLDSRRTINPDTLIRNLAELHVGQPVVHLEHGVGRYAGMTTLEAGGIKGEY
+ LMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWSRARQKAAEKVRDVAA
+ ELLDIYAQRAAKEGFAFKHDREHYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDR
+ LVCGDVGFGKTEVAMRAAFLAVENHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEM
+ LSRFRSAKEQAQILAEAAEGKIDILIGTHKLLQSDVKLRDLGLLIVDEEHRFGVRHKE
+ RIKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVV
+ REAILREVLRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMND
+ FHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWL
+ LTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEEQSGSMETIGF
+ SLYMELLENAVDALKAGREPSLEDLTSQQTEVELRMPSLLPDDFIPDVNTRLSFYKRI
+ ASAKNENELEEIKVELIDRFGLLPDPARNLLDIARLRQQAQKLGIRKLEGNEKGGTIE
+ FAEKNHVDPAWLIGLLQKQPQHFRLDGPTRLKFIQDLSERKTRIDWVRQFMQQLEENA
+ IA"
+ misc_feature 1705408..1708848
+ /locus_tag="SARI_01775"
+ /note="transcription-repair coupling factor; Provisional;
+ Region: PRK10689"
+ /db_xref="CDD:182649"
+ misc_feature 1706833..1707126
+ /locus_tag="SARI_01775"
+ /note="CarD-like/TRCF domain; Region: CarD_TRCF;
+ smart01058"
+ /db_xref="CDD:215001"
+ misc_feature 1707271..1707681
+ /locus_tag="SARI_01775"
+ /note="DEAD-like helicases superfamily. A diverse family
+ of proteins involved in ATP-dependent RNA or DNA
+ unwinding. This domain contains the ATP-binding region;
+ Region: DEXDc; cd00046"
+ /db_xref="CDD:238005"
+ misc_feature 1707298..1707312
+ /locus_tag="SARI_01775"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238005"
+ misc_feature 1707592..1707603
+ /locus_tag="SARI_01775"
+ /note="putative Mg++ binding site [ion binding]; other
+ site"
+ /db_xref="CDD:238005"
+ misc_feature 1707763..1708152
+ /locus_tag="SARI_01775"
+ /note="Helicase superfamily c-terminal domain; associated
+ with DEXDc-, DEAD-, and DEAH-box proteins, yeast
+ initiation factor 4A, Ski2p, and Hepatitis C virus NS3
+ helicases; this domain is found in a wide variety of
+ helicases and helicase related proteins; may...; Region:
+ HELICc; cd00079"
+ /db_xref="CDD:238034"
+ misc_feature order(1707856..1707867,1707931..1707936,1708009..1708017)
+ /locus_tag="SARI_01775"
+ /note="nucleotide binding region [chemical binding]; other
+ site"
+ /db_xref="CDD:238034"
+ misc_feature order(1708033..1708035,1708099..1708101,1708111..1708113,
+ 1708120..1708122)
+ /locus_tag="SARI_01775"
+ /note="ATP-binding site [chemical binding]; other site"
+ /db_xref="CDD:238034"
+ misc_feature 1708420..1708719
+ /locus_tag="SARI_01775"
+ /note="This domain is found in proteins necessary for
+ strand-specific repair in DNA such as TRCF in Escherichia
+ coli; Region: TRCF; smart00982"
+ /db_xref="CDD:198050"
+ unsure 1705448..1705460
+ /locus_tag="SARI_01775"
+ /note="Sequence derived from one plasmid subclone"
+ gene 1709003..1709962
+ /locus_tag="SARI_01776"
+ CDS 1709003..1709962
+ /locus_tag="SARI_01776"
+ /inference="protein motif:HMMPfam:IPR002482"
+ /inference="protein motif:HMMPfam:IPR005490"
+ /inference="protein motif:HMMSmart:IPR002482"
+ /inference="similar to AA sequence:REFSEQ:YP_216152.1"
+ /note="'KEGG: eci:UTI89_C2228 4.9e-68 erfK; hypothetical
+ protein K00257;
+ COG: COG1376 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570804.1"
+ /db_xref="GI:161503692"
+ /db_xref="InterPro:IPR002482"
+ /db_xref="InterPro:IPR005490"
+ /translation="MFKNMRLSRWWALLALTATIMLALPAQANTWPLPPPGSRLVGEN
+ KFHVVEDDGGSLEAIAKKYNVGFLALLQANPGIDPYVPRAGSVLTIPLQTLLPDAPRE
+ GIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKRANPTWTPTAN
+ IRARYKAQGIDLPAVVPAGPDNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCI
+ RLRDGDIETLFRQVTPGTKVNIINTPIKTSVEPGGVRLVEVHQPLSKNIGDDPQVLPI
+ VLNGPMQTFKDAPQTDAAVMEHVMEVRSGMPVDVTRTPETKPL"
+ misc_feature 1709081..1709950
+ /locus_tag="SARI_01776"
+ /note="L,D-transpeptidase; Provisional; Region: PRK10190"
+ /db_xref="CDD:182294"
+ misc_feature 1709135..1709272
+ /locus_tag="SARI_01776"
+ /note="Lysine Motif is a small domain involved in binding
+ peptidoglycan; Region: LysM; cd00118"
+ /db_xref="CDD:212030"
+ misc_feature 1709312..1709722
+ /locus_tag="SARI_01776"
+ /note="L,D-transpeptidase catalytic domain; Region: YkuD;
+ pfam03734"
+ /db_xref="CDD:217702"
+ gene complement(1710084..1710347)
+ /locus_tag="SARI_01777"
+ CDS complement(1710084..1710347)
+ /locus_tag="SARI_01777"
+ /inference="protein motif:HMMPfam:IPR010854"
+ /inference="similar to AA sequence:REFSEQ:YP_216151.1"
+ /note="'KEGG: reu:Reut_B4338 0.0018 copper/zinc superoxide
+ dismutase K04565;
+ COG: NOG13874 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570805.1"
+ /db_xref="GI:161503693"
+ /db_xref="InterPro:IPR010854"
+ /translation="MTMKNVKILIAAVVFSSLSFASFAAVEVQATPEGQQKFGTISAN
+ GGTNLGSLEDQLAQKAEEMGAKSFRITSITGPNTLHGTAVIYK"
+ misc_feature complement(1710087..1710242)
+ /locus_tag="SARI_01777"
+ /note="Protein of unknown function (DUF1471); Region:
+ DUF1471; pfam07338"
+ /db_xref="CDD:219380"
+ gene 1710580..1711215
+ /locus_tag="SARI_01778"
+ CDS 1710580..1711215
+ /locus_tag="SARI_01778"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR001647"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:REFSEQ:YP_216150.1"
+ /note="'COG: COG1309 Transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="TetR family transcriptional regulator"
+ /protein_id="YP_001570806.2"
+ /db_xref="GI:448236240"
+ /db_xref="InterPro:IPR001647"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /translation="MTTDTTSCAKKSRGRPKVFDREAALDKAMRLFWQHGYEATSLAD
+ LVEATGAKAPTLYAEFTNKEGLFRAVLDRYITRFALKHEAQLFCDEKSVESALEDYFR
+ EIAACFTSTDTPAGCFMINTSATLAASSRDIARTVKSRHAMQEQTLIQFLRQRQERGE
+ IPAHCNPQMLAEYINCILQGMSISAREGATFEQLMQIARTTLRIWPELLKP"
+ misc_feature 1710607..1711197
+ /locus_tag="SARI_01778"
+ /note="Transcriptional regulator [Transcription]; Region:
+ AcrR; COG1309"
+ /db_xref="CDD:224228"
+ misc_feature 1710652..1710789
+ /locus_tag="SARI_01778"
+ /note="Bacterial regulatory proteins, tetR family; Region:
+ TetR_N; pfam00440"
+ /db_xref="CDD:201228"
+ misc_feature 1711039..>1711206
+ /locus_tag="SARI_01778"
+ /note="RecT family; Region: RecT; cl04285"
+ /db_xref="CDD:243693"
+ gene complement(1711289..1711816)
+ /locus_tag="SARI_01779"
+ CDS complement(1711289..1711816)
+ /locus_tag="SARI_01779"
+ /inference="protein motif:HMMPfam:IPR008816"
+ /inference="similar to AA sequence:INSD:AAO69333.1"
+ /note="'COG: COG3134 Predicted outer membrane lipoprotein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570807.1"
+ /db_xref="GI:161503695"
+ /db_xref="InterPro:IPR008816"
+ /translation="MLAGIGIGVAAALGVAAVASLNVFDRGPQYAQVISAKPIKETVK
+ TPRQECRNVTVTHRRPVQDENRIAGSVLGAVAGGVIGHQFGGGRGKDLATVVGALGGG
+ YAGNQIQGAMQEGDTYTTTQQRCKTVYDKSEKMLGYDVTYKIGDQQGKIRMDKDPGTQ
+ IPLDGNGQLVLNNKA"
+ misc_feature complement(1711301..1711759)
+ /locus_tag="SARI_01779"
+ /note="hypothetical protein; Provisional; Region:
+ PRK11280"
+ /db_xref="CDD:183072"
+ gene complement(1712006..1713337)
+ /locus_tag="SARI_01780"
+ CDS complement(1712006..1713337)
+ /locus_tag="SARI_01780"
+ /inference="protein motif:HMMPfam:IPR001327"
+ /inference="protein motif:HMMPfam:IPR013027"
+ /inference="similar to AA sequence:INSD:CAD08335.1"
+ /note="'KEGG: stt:t1709 2.0e-229 ndh; NADH dehydrogenase
+ K03885;
+ COG: COG1252 NADH dehydrogenase, FAD-containing subunit;
+ Psort location: cytoskeletal, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570808.1"
+ /db_xref="GI:161503696"
+ /db_xref="InterPro:IPR001327"
+ /db_xref="InterPro:IPR013027"
+ /translation="MVNKFKGVTLTTPLKKIVIVGGGAGGLEMATQLGHKLGRKKKAK
+ ITLVDRNHSHLWKPLLHEVATGSLDEGVDALSYLAHARNHGFQFQLGSVMDINREAKT
+ ITIAELRDEKGELLVPERKIAYDTLVMALGSTSNDFNTPGVKEHCIFLDNPHQARRFH
+ QEMLNLFLKYSANLGANGKVNIAIVGGGATGVELSAELHNAVKQLHSYGYKGLTNDAL
+ NVTLVEAGERILPALPPRISSAAHNELTKLGVRVLTQTMVTSADEGGLHTKEGEYIQA
+ DLMVWAAGIKAPDFMREIGGLETNRINQLVVESTLQTTRDPDIFAIGDCASCARPEGG
+ FVPPRAQAAHQMATCAMNNILAQMNGKPLKAYQYKDHGSLVSLSNFSTVGSLMGNLTR
+ GSMMIEGRIARFVYISLYRMHQIALHGYFKTGLMMLVGSINRVIRPRLKLH"
+ misc_feature complement(1712042..1713256)
+ /locus_tag="SARI_01780"
+ /note="NADH dehydrogenase, FAD-containing subunit [Energy
+ production and conversion]; Region: Ndh; COG1252"
+ /db_xref="CDD:224172"
+ misc_feature complement(1712543..1712797)
+ /locus_tag="SARI_01780"
+ /note="Pyridine nucleotide-disulphide oxidoreductase;
+ Region: Pyr_redox; pfam00070"
+ /db_xref="CDD:215691"
+ gene complement(1713558..1714100)
+ /locus_tag="SARI_01781"
+ CDS complement(1713558..1714100)
+ /locus_tag="SARI_01781"
+ /inference="protein motif:HMMPfam:IPR008886"
+ /inference="similar to AA sequence:REFSEQ:YP_216147.1"
+ /note="'COG: COG3150 Predicted esterase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570809.1"
+ /db_xref="GI:161503697"
+ /db_xref="InterPro:IPR008886"
+ /translation="MIIYLHGFDSNSPGNHEKVLQLQFIDPDVRLVSYSTRHPKHDMQ
+ HLLKEVDKMLQLNVDDRPLICGVGLGGYWAERIGFLCDIRQVVFNPNLFPYENMEGKI
+ DRPEEYADIATKCVTNFREKNRDRCLVILSRHDEALDSQRSAEALHPYYEIVWDEEQT
+ HKFKNISPHLQRIKAFKTLG"
+ misc_feature complement(1713561..1714100)
+ /locus_tag="SARI_01781"
+ /note="hypothetical protein; Provisional; Region:
+ PRK04940"
+ /db_xref="CDD:179896"
+ unsure 1713565..1713623
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(1714125..1715138)
+ /locus_tag="SARI_01782"
+ CDS complement(1714125..1715138)
+ /locus_tag="SARI_01782"
+ /inference="protein motif:HMMPfam:IPR001764"
+ /inference="protein motif:ScanRegExp:IPR001764"
+ /inference="similar to AA sequence:REFSEQ:YP_216146.1"
+ /note="hydrolyzes the terminal non-reducing
+ N-acetyl-D-hexosamine residues in
+ N-acetyl-beta-D-hexosaminides"
+ /codon_start=1
+ /transl_table=11
+ /product="beta-hexosaminidase"
+ /protein_id="YP_001570810.1"
+ /db_xref="GI:161503698"
+ /db_xref="InterPro:IPR001764"
+ /translation="MLDIEGFELDAEEREILAHPLVGGLILFTRNYHDPEQLRELVRQ
+ IRAASRNQLVVAVDQEGGRVQRFREGFTRLPAAQSFFALHGLEEGGRLAQEAGWLMAS
+ EMIAMDIDISFAPVLDVGHICAAIGERSYHADPAKALAVATRFIDGMHDAGMKTTGKH
+ FPGHGAVTADSHKETPCDPRPETDIRGKDMSVFRTLISENKLDAIMPAHVIYSAVDPR
+ PASGSPHWLKTVLRQELGFDGVIFSDDLSMEGAAIMGSYAERAQASLDAGCDMILVCN
+ NRKGAVSVLDNLSPIKAERVTRLYHKGSFSRRELMDSTRWKTASAQLKQLHERWQEEK
+ AGH"
+ misc_feature complement(1714128..1715138)
+ /locus_tag="SARI_01782"
+ /note="Beta-glucosidase-related glycosidases [Carbohydrate
+ transport and metabolism]; Region: BglX; COG1472"
+ /db_xref="CDD:224389"
+ misc_feature complement(1714146..1715138)
+ /locus_tag="SARI_01782"
+ /note="beta-hexosaminidase; Provisional; Region: PRK05337"
+ /db_xref="CDD:235417"
+ gene complement(1715169..1715984)
+ /gene="thiK"
+ /locus_tag="SARI_01783"
+ CDS complement(1715169..1715984)
+ /gene="thiK"
+ /locus_tag="SARI_01783"
+ /inference="protein motif:HMMPfam:IPR002575"
+ /inference="protein motif:superfamily:IPR011009"
+ /inference="similar to AA sequence:SwissProt:Q8ZQ07"
+ /note="catalyzes the phosphorylation of thiamine to
+ thiamine phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="thiamine kinase"
+ /protein_id="YP_001570811.2"
+ /db_xref="GI:448236241"
+ /db_xref="InterPro:IPR002575"
+ /db_xref="InterPro:IPR011009"
+ /translation="MRSSNNNPLTRDEILSRYFPQYLPVAAAAQGLSGGSCIIAHDTH
+ RIVLRRHHDPDAPESHFLRHYRALSRLPVSLAPRALFYTPGWMAVEYLHGAVNSALPD
+ ADGLAALLYHLHQQPRFGWRIALSPLLAQYWACCDPTRRTPFWLGRLKYLQKNGEPRP
+ LRLAPLHMDVHGDNIVLTAAGLRLIDWEYAGDGDIALELAAVWVEDERQRRQLANAYA
+ ARARIDARLLWRQIRLWQPWVIMLKAGWFEYRWRQTGEQQFIRLADETWRQLR"
+ misc_feature complement(1715172..1715912)
+ /gene="thiK"
+ /locus_tag="SARI_01783"
+ /note="thiamine kinase; Region: ycfN_thiK; TIGR02721"
+ /db_xref="CDD:233983"
+ misc_feature complement(1715172..1715726)
+ /gene="thiK"
+ /locus_tag="SARI_01783"
+ /note="thiamine kinase; Provisional; Region: thiK;
+ PRK10271"
+ /db_xref="CDD:182349"
+ misc_feature complement(order(1715370..1715372,1715478..1715480))
+ /gene="thiK"
+ /locus_tag="SARI_01783"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:240159"
+ gene complement(1715965..1716594)
+ /locus_tag="SARI_01784"
+ CDS complement(1715965..1716594)
+ /locus_tag="SARI_01784"
+ /inference="similar to AA sequence:REFSEQ:YP_216144.1"
+ /note="'COG: COG3417 Collagen-binding surface adhesin SpaP
+ (antigen I/II family);
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570812.1"
+ /db_xref="GI:161503700"
+ /translation="MTKMHRYAAIAALAIFLSGCVAQREPAPVEEVKPAPEQPAQPPV
+ VPSVPTIPQQPGPIEHEDQAGQPAPKVRHYDWNGAMQPMVSKMLQADGVTAGSILLVD
+ SVNNRTNGSLNTGEATEILRNALANNGKFTLVSVQQLSMAKQQLGLSPQDSLGTRSKA
+ IGIARNVGAQYVLYSSASGNVNAPALQMQLMLVQTGEIIWSGKGAVQQQ"
+ misc_feature complement(1715968..1716594)
+ /locus_tag="SARI_01784"
+ /note="Collagen-binding surface adhesin SpaP (antigen I/II
+ family) [General function prediction only]; Region: FlgN;
+ COG3417"
+ /db_xref="CDD:225951"
+ unsure 1716285..1716300
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(1716608..1716982)
+ /locus_tag="SARI_01785"
+ CDS complement(1716608..1716982)
+ /locus_tag="SARI_01785"
+ /inference="protein motif:HMMPfam:IPR010824"
+ /inference="similar to AA sequence:REFSEQ:NP_460176.1"
+ /note="'COG: COG5633 Predicted periplasmic lipoprotein;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570813.1"
+ /db_xref="GI:161503701"
+ /db_xref="InterPro:IPR010824"
+ /translation="MTRGCIVVSLGLLLLTGCRSHPEIPVSDEQSLVMESTVLAAGIT
+ AEQPELTASDIQPSASSRVYNERQEPITVHYRFYWYDARGLEMHPLEAPRSVTIPARS
+ SVTLFGSANYLGAHKVRLYLYL"
+ misc_feature complement(1716611..1716982)
+ /locus_tag="SARI_01785"
+ /note="Predicted periplasmic lipoprotein [General function
+ prediction only]; Region: COG5633"
+ /db_xref="CDD:227920"
+ misc_feature complement(1716614..1716916)
+ /locus_tag="SARI_01785"
+ /note="Putative periplasmic lipoprotein; Region: DUF1425;
+ cd09030"
+ /db_xref="CDD:176923"
+ misc_feature complement(order(1716614..1716628,1716704..1716706,
+ 1716842..1716844,1716848..1716850,1716854..1716856,
+ 1716887..1716889,1716902..1716916))
+ /locus_tag="SARI_01785"
+ /note="putative dimer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:176923"
+ gene complement(1716985..1717383)
+ /locus_tag="SARI_01786"
+ CDS complement(1716985..1717383)
+ /locus_tag="SARI_01786"
+ /inference="protein motif:HMMPanther:IPR001310"
+ /inference="protein motif:HMMPfam:IPR001310"
+ /inference="protein motif:HMMPIR:IPR001310"
+ /inference="protein motif:ScanRegExp:IPR001310"
+ /inference="similar to AA sequence:REFSEQ:YP_216142.1"
+ /note="'KEGG: eci:UTI89_C1231 5.1e-57 ycfF; HIT-like
+ protein YcfF K01518;
+ COG: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase
+ and other HIT family hydrolases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="purine nucleoside phosphoramidase"
+ /protein_id="YP_001570814.1"
+ /db_xref="GI:161503702"
+ /db_xref="InterPro:IPR001310"
+ /translation="MCAARAIMKKENLVAEETIFSKIIRREIPSDIVYQDELVTAFRD
+ ISPQAPTHILIIPNILIPTVNDVTAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNT
+ NRHGGQEVYHIHMHLLGGRPLGPMLAYKGL"
+ misc_feature complement(1717024..1717335)
+ /locus_tag="SARI_01786"
+ /note="Protein Kinase C Interacting protein related
+ (PKCI): PKCI and related proteins belong to the ubiquitous
+ HIT family of hydrolases that act on alpha-phosphates of
+ ribonucleotides. The members of this subgroup have a
+ conserved HxHxHxx motif (x is a...; Region: PKCI_related;
+ cd01276"
+ /db_xref="CDD:238607"
+ misc_feature complement(order(1717036..1717038,1717042..1717044,
+ 1717054..1717056,1717060..1717062,1717081..1717083,
+ 1717222..1717224,1717228..1717230,1717249..1717254,
+ 1717258..1717260))
+ /locus_tag="SARI_01786"
+ /note="nucleotide binding site/active site [active]"
+ /db_xref="CDD:238607"
+ misc_feature complement(order(1717030..1717038,1717042..1717044,
+ 1717048..1717050))
+ /locus_tag="SARI_01786"
+ /note="HIT family signature motif; other site"
+ /db_xref="CDD:238607"
+ misc_feature complement(1717042..1717044)
+ /locus_tag="SARI_01786"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:238607"
+ gene 1717686..1719860
+ /locus_tag="SARI_01787"
+ CDS 1717686..1719860
+ /locus_tag="SARI_01787"
+ /inference="protein motif:HMMPfam:IPR000531"
+ /inference="protein motif:HMMPfam:IPR012910"
+ /inference="protein motif:HMMTigr:IPR010105"
+ /inference="protein motif:ScanRegExp:IPR010916"
+ /note="'COG: COG4773 Outer membrane receptor for ferric
+ coprogen and ferric-rhodotorulic acid;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="ferric-rhodotorulic acid outer membrane
+ transporter"
+ /protein_id="YP_001570815.2"
+ /db_xref="GI:448236242"
+ /db_xref="InterPro:IPR000531"
+ /db_xref="InterPro:IPR010105"
+ /db_xref="InterPro:IPR010916"
+ /db_xref="InterPro:IPR012910"
+ /translation="MFFIQYRRDKHIQSTAAPSLLAMGIAMAFMPAAFAAEDTVIVEG
+ AMSADASNSEEQDYSVKTTAAGTKMPMTQRDIPQSVSIVSQQRMEDQQLQTLGEVMAN
+ TLGISGSQADSDRISYYSRGFEIDNYMVDGIPTYFESRWNLGDTLTDTALYERVEVVR
+ GANGLMTGTGNPSASINMIRKHATSREFRGNVSTEYGSWNKQRYVMDLQSPLTPDGNV
+ RGRIVAGYQNNDSWLDRYNNEKTFFSGIVDADLGVTTGLSAGYEYQKIDVNSPTWGGL
+ PRWNTDGSKNSYDRARSTAPEWAYNDKEINKFFVTLKQRFAESWQATLNATHTEVKFD
+ SKMMYIDALVDKENGALVSPYGASYPVVGGTGWNSGKRKVDAIDLFADGAYALFGRQH
+ NMMFGGSYSKQNNRYFSAWSNVFPNEIGNFSAFNGNFPQTNWAPQNLAQDDTTHIKSL
+ YAATRMSLADPLHLILGARYTNWRIDTLTYGMEKNHTTPYAGLIYDIDDNWSAYASYT
+ SIFQPQNKRDKAGQYLAPITGNNYEVGLKSDWMNSRLTSTLSVFRIEQDNVAQATTIP
+ IPGSNGEFAWKPTDGTVSKGVEFEVNGAITDNWQMTFGATRYIAEDNEGNAVNPNLPR
+ TSVKLFTRYRLPVMPELTVGGGINWQNRVYKDTATPYGAFRAEQGSYALVDLFTRYQV
+ TKNFSVQGNINNLLNKTYDTNIDGSIVYGAPRNVSLTANYQF"
+ misc_feature 1717689..1719857
+ /locus_tag="SARI_01787"
+ /note="ferric-rhodotorulic acid outer membrane
+ transporter; Provisional; Region: PRK10003"
+ /db_xref="CDD:236640"
+ misc_feature 1717920..1719857
+ /locus_tag="SARI_01787"
+ /note="TonB dependent/Ligand-Gated channels are created by
+ a monomeric 22 strand (22,24) anti-parallel beta-barrel.
+ Ligands apparently bind to the large extracellular loops.
+ The N-terminal 150-200 residues form a plug from the
+ periplasmic end of barrel; Region: ligand_gated_channel;
+ cd01347"
+ /db_xref="CDD:238657"
+ misc_feature order(1717920..1717949,1717977..1718006,1718040..1718045,
+ 1718046..1718054,1718067..1718090,1718133..1718165,
+ 1718199..1718225)
+ /locus_tag="SARI_01787"
+ /note="N-terminal plug; other site"
+ /db_xref="CDD:238657"
+ misc_feature order(1718682..1718684,1718793..1718795)
+ /locus_tag="SARI_01787"
+ /note="ligand-binding site [chemical binding]; other site"
+ /db_xref="CDD:238657"
+ gene complement(1719945..1721426)
+ /locus_tag="SARI_01788"
+ CDS complement(1719945..1721426)
+ /locus_tag="SARI_01788"
+ /inference="protein motif:HMMPfam:IPR001996"
+ /inference="protein motif:HMMPfam:IPR003352"
+ /inference="protein motif:HMMTigr:IPR004719"
+ /inference="protein motif:HMMTigr:IPR011299"
+ /inference="protein motif:HMMTigr:IPR011535"
+ /inference="protein motif:ScanRegExp:IPR001996"
+ /inference="protein motif:superfamily:IPR008934"
+ /inference="similar to AA sequence:INSD:AAL20132.1"
+ /note="phosphoenolpyruvate-dependent sugar
+ phosphotransferase system; catalyzes the phosphorylation
+ of incoming sugar substrates concomitant with their
+ translocation across the cell membrane; IIB is
+ phosphorylated by IIA and then transfers the phosphoryl
+ group to the sugar; IIC forms the translocation channel"
+ /codon_start=1
+ /transl_table=11
+ /product="PTS system glucose-specific transporter subunits
+ IIBC"
+ /protein_id="YP_001570816.1"
+ /db_xref="GI:161503704"
+ /db_xref="InterPro:IPR001996"
+ /db_xref="InterPro:IPR003352"
+ /db_xref="InterPro:IPR004719"
+ /db_xref="InterPro:IPR008934"
+ /db_xref="InterPro:IPR011299"
+ /db_xref="InterPro:IPR011535"
+ /translation="MRENVEKHKYSGALSIMFKNAFANLQKVGKSLMLPVSVLPIAGI
+ LLGVGSANFSWLPAVVSHVMAEAGGSVFANMPLIFAIGVALGFTNNDGVSALAAVVAY
+ GIMVKTMAVVAPLVLHLPAEEIAVKHLADTGVLGGIISGAIAAYMFNRFYRIKLPEYL
+ GFFAGKRFVPIISGLAAIFTGVVLSFIWPPIGTAIQAFSQWAAYQNPVVAFGIYGFIE
+ RCLVPFGLHHIWNVPFQMQIGEYTNAAGQVFHGDIPRYMAGDPTAGMLSGGFLFKMYG
+ LPAAAIAIWHSAKPENRAKVGGIMISAALTSFLTGITEPIEFSFMFVAPILYIIHAIL
+ AGLAFPICILLGMRDGTSFSHGLIDFIVLSGNSSKLWLFPIVGAGYAIVYYTVFRVLI
+ KALDLKTPGREDSTDDAKAGASSEMAPALVAAFGGKENITNLDACITRLRVSVADVAK
+ VDQAGLKQLGAAGVVVAGSGVQAIFGTKSDNLKTEMDEYIRNS"
+ misc_feature complement(1719948..1721378)
+ /locus_tag="SARI_01788"
+ /note="PTS system glucose-specific transporter subunits
+ IIBC; Provisional; Region: PRK11089"
+ /db_xref="CDD:182955"
+ misc_feature complement(1720188..1721378)
+ /locus_tag="SARI_01788"
+ /note="Phosphotransferase system IIC components,
+ glucose/maltose/N-acetylglucosamine-specific [Carbohydrate
+ transport and metabolism]; Region: PtsG; COG1263"
+ /db_xref="CDD:224183"
+ misc_feature complement(1719957..1720184)
+ /locus_tag="SARI_01788"
+ /note="PTS_IIB, PTS system, glucose/sucrose specific IIB
+ subunit. The bacterial phosphoenolpyruvate: sugar
+ phosphotransferase system (PTS) is a multi-protein system
+ involved in the regulation of a variety of metabolic and
+ transcriptional processes. This family...; Region:
+ PTS_IIB_glc; cd00212"
+ /db_xref="CDD:238130"
+ misc_feature complement(1720101..1720121)
+ /locus_tag="SARI_01788"
+ /note="active site turn [active]"
+ /db_xref="CDD:238130"
+ misc_feature complement(1720116..1720118)
+ /locus_tag="SARI_01788"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238130"
+ gene 1721511..1721648
+ /locus_tag="SARI_01789"
+ CDS 1721511..1721648
+ /locus_tag="SARI_01789"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570817.1"
+ /db_xref="GI:161503705"
+ /translation="MFDGYHVSMPDSLKSITFWQNEFLNISKSSFTAHFVAVNFTRFA
+ Y"
+ gene complement(1721672..1722469)
+ /locus_tag="SARI_01790"
+ CDS complement(1721672..1722469)
+ /locus_tag="SARI_01790"
+ /inference="protein motif:HMMPanther:IPR001130"
+ /inference="protein motif:HMMPfam:IPR001130"
+ /inference="protein motif:HMMPIR:IPR012278"
+ /inference="protein motif:HMMTigr:IPR001130"
+ /inference="protein motif:ScanRegExp:IPR001130"
+ /inference="similar to AA sequence:REFSEQ:YP_216139.1"
+ /note="'KEGG: sec:SC1152 1.5e-137 ycfH; putative
+ metal-dependent hydrolase K03424;
+ COG: COG0084 Mg-dependent DNase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative metallodependent hydrolase"
+ /protein_id="YP_001570818.1"
+ /db_xref="GI:161503706"
+ /db_xref="InterPro:IPR001130"
+ /db_xref="InterPro:IPR012278"
+ /translation="MFLVDSHCHLDGLDYQSLHKDVDDVLAKAAARDVKFCLAVATTL
+ PGYRHMRELVGKRDNVVFSCGVHPLNQDEAYDVAELRALAAEDDVVAMGETGLDYFYM
+ PETKIRQQASFIHHIQIGRELHKPVIVHTRDARADTLAILREEKVTDCGGVLHCFTED
+ RETAGKLLDLGFYISFSGIVTFRNAGQLRDAARYVPLDRLLVETDSPYLAPVPHRGKE
+ NQPAMVRDVAEYMAVLKGVAVEELAQITTDNFARLFHIDASRLSSIR"
+ misc_feature complement(1721705..1722463)
+ /locus_tag="SARI_01790"
+ /note="TatD like proteins; E.coli TatD is a cytoplasmic
+ protein, shown to have magnesium dependent DNase activity;
+ Region: TatD_DNAse; cd01310"
+ /db_xref="CDD:238635"
+ misc_feature complement(order(1721855..1721857,1722005..1722007,
+ 1722080..1722082,1722443..1722445,1722449..1722451))
+ /locus_tag="SARI_01790"
+ /note="active site"
+ /db_xref="CDD:238635"
+ gene complement(1722480..1723484)
+ /locus_tag="SARI_01791"
+ CDS complement(1722480..1723484)
+ /locus_tag="SARI_01791"
+ /inference="protein motif:HMMTigr:IPR004622"
+ /inference="protein motif:superfamily:IPR008921"
+ /inference="similar to AA sequence:INSD:CAD08325.1"
+ /note="catalyzes the DNA-template-directed extension of
+ the 3'-end of a DNA strand; the delta' subunit seems to
+ interact with the gamma subunit to transfer the beta
+ subunit on the DNA"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA polymerase III subunit delta'"
+ /protein_id="YP_001570819.1"
+ /db_xref="GI:161503707"
+ /db_xref="InterPro:IPR004622"
+ /db_xref="InterPro:IPR008921"
+ /translation="MKWYPWLRPAYEKLVESYQAGRGHHALLIQSLPGMGDEALSYAL
+ SRYLLCQQPEGHKSCGHCRGCQLMQAGTHPDYYTLTPDKGKSSLGVDSVREVSEKLYE
+ HSRLGGAKVVWIADAALLTDAAANALLKTLEEPPEQTWFFLASPEPARLLATLRSRCR
+ LHHLAPPSESYAMSWLSREVTASQEALLTALRLNAGSPGAALALLQSERWAQREALCQ
+ ALMDSLHTGDWYALLTALNHEQAPARLHWLATLLVDALKRQHGASYLTNVDADAVVAA
+ LAGPLSPARIQAILNDVCHCRDQLLHVTGLNRELVLTDLILRIEHYLQPGTLLPVPHL
+ "
+ misc_feature complement(1722483..1723484)
+ /locus_tag="SARI_01791"
+ /note="DNA polymerase III subunit delta'; Validated;
+ Region: PRK07993"
+ /db_xref="CDD:181190"
+ misc_feature complement(1722516..1722869)
+ /locus_tag="SARI_01791"
+ /note="DNA polymerase III, delta subunit, C terminal;
+ Region: DNApol3-delta_C; pfam09115"
+ /db_xref="CDD:220116"
+ gene complement(1723481..1724122)
+ /gene="tmk"
+ /locus_tag="SARI_01792"
+ CDS complement(1723481..1724122)
+ /gene="tmk"
+ /locus_tag="SARI_01792"
+ /inference="protein motif:HMMPfam:IPR000062"
+ /inference="protein motif:HMMTigr:IPR000062"
+ /inference="protein motif:ScanRegExp:IPR000062"
+ /inference="similar to AA sequence:SwissProt:P65246"
+ /note="catalyzes the reversible phosphoryl transfer from
+ adenosine triphosphate (ATP) to thymidine monophosphate
+ (dTMP) to form thymidine diphosphate (dTDP)"
+ /codon_start=1
+ /transl_table=11
+ /product="thymidylate kinase"
+ /protein_id="YP_001570820.1"
+ /db_xref="GI:161503708"
+ /db_xref="InterPro:IPR000062"
+ /translation="MGSNYIVIEGLEGAGKTTARDVVVETLEQLGIRNMIFTREPGGT
+ QLAEKLRSLVLDIRSVGDEVITDKAEVLMFYAARVQLVETVIKPALAQGVWVIGDRHD
+ LSTQAYQGGGRGIDQTMLATLRDAVLGDFRPDLTLYLDVTPEVGLKRARARGDLDRIE
+ QESFDFFNRTRARYLELAAQDPRIRTIDATQPLDAVMRDIRATVTTWVQGQAA"
+ misc_feature complement(1723496..1724122)
+ /gene="tmk"
+ /locus_tag="SARI_01792"
+ /note="thymidylate kinase; Validated; Region: tmk;
+ PRK00698"
+ /db_xref="CDD:234814"
+ misc_feature complement(1723508..1724110)
+ /gene="tmk"
+ /locus_tag="SARI_01792"
+ /note="Thymidine monophosphate kinase (TMPK), also known
+ as thymidylate kinase, catalyzes the phosphorylation of
+ thymidine monophosphate (TMP) to thymidine diphosphate
+ (TDP) utilizing ATP as its preferred phophoryl donor. TMPK
+ represents the rate-limiting step...; Region: TMPK;
+ cd01672"
+ /db_xref="CDD:238835"
+ misc_feature complement(order(1723664..1723666,1723799..1723801,
+ 1723823..1723828,1723889..1723891,1723901..1723903,
+ 1724072..1724074))
+ /gene="tmk"
+ /locus_tag="SARI_01792"
+ /note="TMP-binding site; other site"
+ /db_xref="CDD:238835"
+ misc_feature complement(order(1723556..1723558,1723676..1723678,
+ 1724069..1724071))
+ /gene="tmk"
+ /locus_tag="SARI_01792"
+ /note="ATP-binding site [chemical binding]; other site"
+ /db_xref="CDD:238835"
+ gene complement(1724112..1725134)
+ /locus_tag="SARI_01793"
+ CDS complement(1724112..1725134)
+ /locus_tag="SARI_01793"
+ /inference="protein motif:HMMPfam:IPR003770"
+ /inference="protein motif:HMMTigr:IPR003770"
+ /inference="similar to AA sequence:INSD:AAX65055.1"
+ /note="'KEGG: eci:UTI89_C1224 1.8e-157 yceG; putative
+ thymidylate kinase;
+ COG: COG1559 Predicted periplasmic solute-binding protein;
+ Psort location: extracellular, including cell wall, score:
+ 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570821.1"
+ /db_xref="GI:161503709"
+ /db_xref="InterPro:IPR003770"
+ /translation="MKKLSGVFLLLLVVLGIAAGVGVWKVRHLANSTLLIKDETIFTL
+ KAGTGRLALGDQLYDEKIINRPRVFQWLLRVEPELSHFKAGTYRFMPGMTVRDMLELL
+ ESGKEAQFPLRFVEGMRLSDYLKQLREAPYIRHTLPDDDYATVARALKLAHPEWVEGW
+ FWPDTWMYTANTSDVAILKRAHQRMVKAVDTVWKGRAGGLPYKDQNQLVTMASIIEKE
+ TAIPSERDQVASVFINRLRIGMRLQTDPTVIYGMGASYNGKLSRADLEKPTAYNTYTI
+ TGLPPGPIASPSEASLQAAAHPAKTPYLYFVADGKGGHTFNTNLASHNRSVQEYLKVL
+ KEKNGQ"
+ misc_feature complement(1724124..1725065)
+ /locus_tag="SARI_01793"
+ /note="conserved hypothetical protein, YceG family;
+ Region: TIGR00247"
+ /db_xref="CDD:232894"
+ misc_feature complement(1724154..1724891)
+ /locus_tag="SARI_01793"
+ /note="proteins similar to Escherichia coli yceG; Region:
+ yceG_like; cd08010"
+ /db_xref="CDD:153433"
+ misc_feature complement(order(1724154..1724156,1724163..1724168,
+ 1724175..1724177,1724196..1724201,1724340..1724342,
+ 1724349..1724351,1724400..1724402,1724406..1724408,
+ 1724796..1724798,1724805..1724810,1724829..1724831,
+ 1724841..1724843,1724868..1724885,1724889..1724891))
+ /locus_tag="SARI_01793"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:153433"
+ gene complement(1725137..1725946)
+ /locus_tag="SARI_01794"
+ CDS complement(1725137..1725946)
+ /locus_tag="SARI_01794"
+ /inference="protein motif:BlastProDom:IPR001544"
+ /inference="protein motif:HMMPanther:IPR001544"
+ /inference="protein motif:HMMPfam:IPR001544"
+ /inference="protein motif:ScanRegExp:IPR001544"
+ /inference="protein motif:superfamily:IPR001544"
+ /inference="similar to AA sequence:INSD:CAD08322.1"
+ /note="catalyzes the formation of 4-aminobenzoate and
+ pyruvate from 4-amino-4-deoxychorismate"
+ /codon_start=1
+ /transl_table=11
+ /product="4-amino-4-deoxychorismate lyase"
+ /protein_id="YP_001570822.1"
+ /db_xref="GI:161503710"
+ /db_xref="InterPro:IPR001544"
+ /translation="MFLIDGKSTDTLAVNNRGTQFGDGCFTTARVVNGRIDLLSMHLH
+ RLQFACDRLGIRFQDWELLADEMQHLAAGKSQAVLKVMITRGVGGRGYSAMGCETPTR
+ VVSVSPYPAHYSHWREKGITLALSPIRLGRNPALAGLKHLNRLEQVLIRSHLEQTDAD
+ EALVLDSEGWVTECCAANVFWRTGDIVSTPRLDQAGVNGIMRQFCLRKLAQSPFHVLE
+ VQAREEAVRQADEVIICNALMPIIPIRAFDGTSYSSRTLFQFLAPFCEHPN"
+ misc_feature complement(1725149..1725946)
+ /locus_tag="SARI_01794"
+ /note="Branched-chain amino acid
+ aminotransferase/4-amino-4-deoxychorismate lyase [Amino
+ acid transport and metabolism / Coenzyme metabolism];
+ Region: IlvE; COG0115"
+ /db_xref="CDD:223193"
+ misc_feature complement(1725176..1725901)
+ /locus_tag="SARI_01794"
+ /note="ADCL_like: 4-Amino-4-deoxychorismate lyase: is a
+ member of the fold-type IV of PLP dependent enzymes that
+ converts 4-amino-4-deoxychorismate (ADC) to
+ p-aminobenzoate and pyruvate. Based on the information
+ available from the crystal structure, most...; Region:
+ ADCL_like; cd01559"
+ /db_xref="CDD:238800"
+ misc_feature complement(order(1725428..1725430,1725527..1725529,
+ 1725812..1725814))
+ /locus_tag="SARI_01794"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:238800"
+ misc_feature complement(1725527..1725529)
+ /locus_tag="SARI_01794"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:238800"
+ gene 1726297..1726845
+ /locus_tag="SARI_01795"
+ CDS 1726297..1726845
+ /locus_tag="SARI_01795"
+ /inference="protein motif:Gene3D:IPR000259"
+ /inference="protein motif:HMMPfam:IPR000259"
+ /inference="protein motif:superfamily:IPR008966"
+ /inference="similar to AA sequence:REFSEQ:YP_739432.1"
+ /note="'COG: COG3539 P pilus assembly protein, pilin FimA;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570823.1"
+ /db_xref="GI:161503711"
+ /db_xref="InterPro:IPR000259"
+ /db_xref="InterPro:IPR008966"
+ /translation="MMKGKFAVVAFAALLGVSSTAMADNKDGDGKIEFFGNIIDAGCQ
+ IDTGASNLSVKLGDVAKTTFTAAGDTAATTKFVLTLKDCPDTLNSKPVTIKYSGTPDT
+ TDNDYLQLTQETGVAKGVAIQLLNSDASPLPLGSASTQTVTVASNKAELDFFARYIAT
+ AAASGIEAGKANGSVNFTMTYN"
+ misc_feature 1726345..1726842
+ /locus_tag="SARI_01795"
+ /note="P pilus assembly protein, pilin FimA [Cell motility
+ and secretion / Intracellular trafficking and secretion];
+ Region: FimA; COG3539"
+ /db_xref="CDD:226069"
+ gene 1727030..1727707
+ /locus_tag="SARI_01796"
+ CDS 1727030..1727707
+ /locus_tag="SARI_01796"
+ /inference="protein motif:BlastProDom:IPR001829"
+ /inference="protein motif:FPrintScan:IPR001829"
+ /inference="protein motif:Gene3D:IPR001829"
+ /inference="protein motif:HMMPfam:IPR001829"
+ /inference="protein motif:ScanRegExp:IPR001829"
+ /inference="protein motif:superfamily:IPR008962"
+ /inference="similar to AA sequence:INSD:EAV33812.1"
+ /note="'COG: COG3121 P pilus assembly protein, chaperone
+ PapD;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570824.1"
+ /db_xref="GI:161503712"
+ /db_xref="InterPro:IPR001829"
+ /db_xref="InterPro:IPR008962"
+ /translation="MKFYSPLLAFVPLFAIATVAEAGVIVGGTRIIYDGNKKETSISV
+ KNPDKFSYLIQSWADISEGSKEKAPFIVTPPLFRLGAGQENMLRIIRTGGNLPEDRES
+ LFWMNIKSIPATEKQESANVLQIAVKTRIKIIYRPQTLKNVPENFADKLTWQRMGNQL
+ RVNNPTPYYMNFSLVNVGTTMIQDATYVAPMSNSTFTIPTGAAGDVSWTLISDYGAAG
+ AKHSSHL"
+ misc_feature 1727051..1727698
+ /locus_tag="SARI_01796"
+ /note="fimbrial assembly chaperone SthB; Provisional;
+ Region: PRK15295"
+ /db_xref="CDD:237936"
+ misc_feature 1727096..1727452
+ /locus_tag="SARI_01796"
+ /note="Gram-negative pili assembly chaperone, N-terminal
+ domain; Region: Pili_assembly_N; pfam00345"
+ /db_xref="CDD:215870"
+ misc_feature 1727507..1727683
+ /locus_tag="SARI_01796"
+ /note="Gram-negative pili assembly chaperone, C-terminal
+ domain; Region: Pili_assembly_C; pfam02753"
+ /db_xref="CDD:217216"
+ gene 1727873..1730308
+ /locus_tag="SARI_01797"
+ CDS 1727873..1730308
+ /locus_tag="SARI_01797"
+ /inference="protein motif:HMMPfam:IPR000015"
+ /inference="protein motif:ScanRegExp:IPR000015"
+ /inference="similar to AA sequence:REFSEQ:ZP_01536501.1"
+ /note="'KEGG: ddi:DDB0230105 0.0030 putative CLK family
+ kinase K08287;
+ COG: COG3188 P pilus assembly protein, porin PapC;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570825.1"
+ /db_xref="GI:161503713"
+ /db_xref="InterPro:IPR000015"
+ /translation="MLGIDGPGKDITDLSAFEEGVGQMPGTYHVDVVINNAAQGTYDI
+ PFSMQKNAQGQQSLQPCLSIDMLKSFRIRTELFPQLVGDGQCAVLNAIPMASAEFDFN
+ HQRLLLSIPQAAVSTMARGWVAPDRLDEGINALLLNYTFTGGNTSARQSGNSDSDSYF
+ LNLRPGLNLGPWRLRNYSTWNQNKTGDTKEESWDSVYTYAQRDIIALKSQLTLGDSTA
+ PSDMFDSVPFRGVQLASDDDMLPESLRGYAPIIRGIARTNAQVSVKQNGYVIYQTYVS
+ PGAFEIADMFPTGSSGDLDVTIKETDGSEQHQVIPFASLPVLQREGRLKYSVTSGQYR
+ PYDGDIDKEWFSQATAIYGLPAGFTLYGGGQFAQHYQSLLAGFGKNLGELGAFSVDGT
+ QAWSTQQDTDKESGQSWRVRYSKNMLATGTNISISGYRYSTSGYYSLSETLDTWRENE
+ WKTSNERRRNRAEIMLNQSLGDVAGSLSVNAVSEDYWNSDREMRSIGVGYSNSFSGIT
+ WNLNYSYNRNTTAGRDSDKVYSEDQVFTLNFNIPLDCWLSNSWASYSLNTSKRGDTSH
+ TVGLNGTALENQNLNWSIQESQTNHGQGNGGYANLDYQGTYARVNAGYGYDHDQRNLN
+ YSIDGGIIAHAHGLTFSQSLGETAALVEAPGVSGVEVTNQTGVKTDFRGYTVVPYLSP
+ YRENTVGLNPETLPDDADLTLTNQILTPTRGAIVRARFDTRVGKRVLMTLTRSNGKTV
+ PFGAIVSVHGENQAQSFIVGDAGQVYLTGMPLSGSLLAKWGNAASEICKVTFQLPEED
+ NTIGVMQTNARCN"
+ misc_feature 1727882..1730302
+ /locus_tag="SARI_01797"
+ /note="P pilus assembly protein, porin PapC [Cell motility
+ and secretion / Intracellular trafficking and secretion];
+ Region: FimD; COG3188"
+ /db_xref="CDD:225729"
+ misc_feature 1727882..1728301
+ /locus_tag="SARI_01797"
+ /note="PapC N-terminal domain; Region: PapC_N; pfam13954"
+ /db_xref="CDD:222472"
+ misc_feature 1728350..1730032
+ /locus_tag="SARI_01797"
+ /note="Type VII secretion system (T7SS), usher protein;
+ Region: Usher; pfam00577"
+ /db_xref="CDD:216001"
+ misc_feature 1730060..1730269
+ /locus_tag="SARI_01797"
+ /note="PapC C-terminal domain; Region: PapC_C; pfam13953"
+ /db_xref="CDD:222471"
+ gene 1730341..1731339
+ /locus_tag="SARI_01798"
+ CDS 1730341..1731339
+ /locus_tag="SARI_01798"
+ /inference="protein motif:Gene3D:IPR000259"
+ /inference="protein motif:HMMPfam:IPR000259"
+ /inference="protein motif:superfamily:IPR008966"
+ /note="'COG: COG3539 P pilus assembly protein, pilin FimA;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570826.1"
+ /db_xref="GI:161503714"
+ /db_xref="InterPro:IPR000259"
+ /db_xref="InterPro:IPR008966"
+ /translation="MNKTSIIACTLATILYTTPGISFAIAIDTKDAGRNTYNYDLSSW
+ SIPTNVGGIAWFDDHGLYKLNTLDETGTARVTLTINGTPVGTASDGSTIYATNNPGIG
+ IAYNLNYSTPTITTPQNDNVAPYEFVFNNGYYATGYLHVKYAIVRLTDQIPPGQITTA
+ PVVTVNYFNEPARTDYPDISFTALSGTVTKQPVITACSINAPTEVKLPTLYGNNLSNG
+ AQGVTDVPTITLTNCPGARNGISYNLSPVYSTHQASNGVLQTVTGEGYAKNVYIQVQN
+ DDGTAHILNGNIPLSDYIGSGNYTIPKFKVAYYIDDVNDVTAGNVKSAIEVKLAYN"
+ misc_feature 1730890..1731336
+ /locus_tag="SARI_01798"
+ /note="Fimbrial protein; Region: Fimbrial; pfam00419"
+ /db_xref="CDD:215909"
+ gene 1731355..1731882
+ /locus_tag="SARI_01799"
+ CDS 1731355..1731882
+ /locus_tag="SARI_01799"
+ /inference="protein motif:Gene3D:IPR000259"
+ /inference="protein motif:HMMPfam:IPR000259"
+ /inference="protein motif:superfamily:IPR008966"
+ /inference="similar to AA sequence:REFSEQ:YP_001175801.1"
+ /note="'COG: COG3539 P pilus assembly protein, pilin FimA;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570827.1"
+ /db_xref="GI:161503715"
+ /db_xref="InterPro:IPR000259"
+ /db_xref="InterPro:IPR008966"
+ /translation="MKTIHGRKTALLLLAGGMLFPALSQAGNTVIDITGKVVASPCVI
+ NSGEPTLAVNIGNDIQADSLSTAGSASAWKDFTLKVSNCPSSTTSFNVTFSGTPDTDA
+ NYYRNTGDATNLAVELATTNDKTSLKNGTALNNLIIDTSTRGYDLLMSARAVSKGNVM
+ PGSIASQVQLTFTYQ"
+ misc_feature 1731355..1731879
+ /locus_tag="SARI_01799"
+ /note="P pilus assembly protein, pilin FimA [Cell motility
+ and secretion / Intracellular trafficking and secretion];
+ Region: FimA; COG3539"
+ /db_xref="CDD:226069"
+ gene 1731897..1732421
+ /locus_tag="SARI_01800"
+ CDS 1731897..1732421
+ /locus_tag="SARI_01800"
+ /inference="protein motif:Gene3D:IPR000259"
+ /inference="protein motif:HMMPfam:IPR000259"
+ /inference="protein motif:superfamily:IPR008966"
+ /inference="similar to AA sequence:REFSEQ:YP_001175801.1"
+ /note="'COG: COG3539 P pilus assembly protein, pilin FimA;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570828.1"
+ /db_xref="GI:161503716"
+ /db_xref="InterPro:IPR000259"
+ /db_xref="InterPro:IPR008966"
+ /translation="MAYRVKQRIPVLAVLLSLTVCGLVHGADINLSGIVIASACTIDT
+ ATQSQKVTFDQARATDYQTPGASGEWQDFSLTLSSCPTSTSSVTATFSGDPDSDDPTK
+ FANTQGDAAGMALQIMSRDHLTEIRPAGTFTVNVDGASHRAEFPLSARMYAPTGEVTA
+ GSFYTVVQFTFTYQ"
+ misc_feature 1731912..1732418
+ /locus_tag="SARI_01800"
+ /note="P pilus assembly protein, pilin FimA [Cell motility
+ and secretion / Intracellular trafficking and secretion];
+ Region: FimA; COG3539"
+ /db_xref="CDD:226069"
+ gene complement(1732494..1733735)
+ /locus_tag="SARI_01801"
+ CDS complement(1732494..1733735)
+ /locus_tag="SARI_01801"
+ /inference="protein motif:HMMPanther:IPR000794"
+ /inference="protein motif:HMMPfam:IPR000794"
+ /inference="protein motif:ScanRegExp:IPR000794"
+ /inference="similar to AA sequence:REFSEQ:NP_460167.1"
+ /note="'FabF; beta-ketoacyl-ACP synthase II, KASII;
+ catalyzes a condensation reaction in fatty acid
+ biosynthesis: addition of an acyl acceptor of two carbons
+ from malonyl-ACP; required for the elongation of
+ short-chain unsaturated acyl-ACP'"
+ /codon_start=1
+ /transl_table=11
+ /product="3-oxoacyl-(acyl carrier protein) synthase II"
+ /protein_id="YP_001570829.2"
+ /db_xref="GI:228879509"
+ /db_xref="InterPro:IPR000794"
+ /translation="MSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTS
+ AYATKFAGLVKDFNCDDIISRKEQRKMDAFIQYGIVAGVQAMQDSGLEVTEENATRIG
+ AAIGSGIGGLGLIEENHSSLVKGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISI
+ ATACTSGVHNIGHAARIIAYGDADAMVAGGAEKASTPLGVGGFGAARALSTRNDNPQA
+ ASRPWDKERDGFVLGDGAGMLVLEEYEHAKARGAKIYAEIVGFGMSSDAYHMTSPPED
+ GAGAAQAMVNALRDAAIEPAQIGYVNAHGTSTPAGDKAEAQAVKSVFGDAASRVMVSS
+ TKSMTGHLLGAAGAVESIFSILALRDRAIPPTINLDTPDEGCDLDFVPHEARQVKELE
+ YALCNSFGFGGTNGSLIFKKV"
+ misc_feature complement(1732497..1733729)
+ /locus_tag="SARI_01801"
+ /note="3-oxoacyl-(acyl carrier protein) synthase II;
+ Reviewed; Region: PRK07314"
+ /db_xref="CDD:235987"
+ misc_feature complement(1732506..1733726)
+ /locus_tag="SARI_01801"
+ /note="Beta-ketoacyl-acyl carrier protein (ACP) synthase
+ (KAS), type I and II. KASs are responsible for the
+ elongation steps in fatty acid biosynthesis. KASIII
+ catalyses the initial condensation and KAS I and II
+ catalyze further elongation steps by Claisen...; Region:
+ KAS_I_II; cd00834"
+ /db_xref="CDD:238430"
+ misc_feature complement(order(1732524..1732526,1732530..1732532,
+ 1732890..1732892,1732932..1732946,1733118..1733123,
+ 1733130..1733135,1733196..1733198,1733205..1733210,
+ 1733217..1733219,1733253..1733261,1733265..1733267,
+ 1733271..1733273,1733289..1733291,1733301..1733303,
+ 1733313..1733315,1733331..1733333,1733367..1733372,
+ 1733376..1733378,1733388..1733393,1733412..1733414))
+ /locus_tag="SARI_01801"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238430"
+ misc_feature complement(order(1732713..1732715,1732824..1732826,
+ 1733244..1733246))
+ /locus_tag="SARI_01801"
+ /note="active site"
+ /db_xref="CDD:238430"
+ gene complement(1733821..1734057)
+ /locus_tag="SARI_01802"
+ CDS complement(1733821..1734057)
+ /locus_tag="SARI_01802"
+ /inference="protein motif:BlastProDom:IPR003231"
+ /inference="protein motif:Gene3D:IPR009081"
+ /inference="protein motif:HMMPfam:IPR006163"
+ /inference="protein motif:HMMTigr:IPR003231"
+ /inference="protein motif:ScanRegExp:IPR006162"
+ /inference="protein motif:superfamily:IPR009081"
+ /inference="similar to AA sequence:INSD:AAX65050.1"
+ /note="'KEGG: eci:UTI89_C1220 1.7e-35 acpP; acyl carrier
+ protein K02078;
+ COG: COG0236 Acyl carrier protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="acyl carrier protein"
+ /protein_id="YP_001570830.2"
+ /db_xref="GI:448236243"
+ /db_xref="InterPro:IPR003231"
+ /db_xref="InterPro:IPR006162"
+ /db_xref="InterPro:IPR006163"
+ /db_xref="InterPro:IPR009081"
+ /translation="MSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELV
+ MALEEEFDTEIPDEEAEKITTVQAAIDYINGHQA"
+ misc_feature complement(1733824..1734057)
+ /locus_tag="SARI_01802"
+ /note="acyl carrier protein; Provisional; Region: acpP;
+ PRK00982"
+ /db_xref="CDD:179197"
+ gene complement(1734211..1734945)
+ /gene="fabG"
+ /locus_tag="SARI_01803"
+ CDS complement(1734211..1734945)
+ /gene="fabG"
+ /locus_tag="SARI_01803"
+ /inference="protein motif:FPrintScan:IPR002198"
+ /inference="protein motif:FPrintScan:IPR002347"
+ /inference="protein motif:HMMPanther:IPR002347"
+ /inference="protein motif:HMMPfam:IPR002198"
+ /inference="protein motif:HMMTigr:IPR011284"
+ /inference="protein motif:ScanRegExp:IPR002198"
+ /inference="similar to AA sequence:INSD:AAC38650.1"
+ /note="catalyzes the first of the two reduction steps in
+ the elongation cycle of fatty acid synthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="3-ketoacyl-(acyl-carrier-protein) reductase"
+ /protein_id="YP_001570831.1"
+ /db_xref="GI:161503719"
+ /db_xref="InterPro:IPR002198"
+ /db_xref="InterPro:IPR002347"
+ /db_xref="InterPro:IPR011284"
+ /translation="MSFEGKIALVTGASRGIGRAIAETLVARGARVIGTATSENGAKN
+ ISDYLGANGKGLMLNVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDE
+ WNDIIETNLSSVFRLSKAVMRAMMKKRCGRIITIGSVVGTMGNAGQANYAAAKAGLIG
+ FSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIASA
+ VAFLASDEASYITGETLHVNGGMYMV"
+ misc_feature complement(1734214..1734945)
+ /gene="fabG"
+ /locus_tag="SARI_01803"
+ /note="3-ketoacyl-(acyl-carrier-protein) reductase;
+ Validated; Region: fabG; PRK05557"
+ /db_xref="CDD:235500"
+ misc_feature complement(1734220..1734930)
+ /gene="fabG"
+ /locus_tag="SARI_01803"
+ /note="beta-Keto acyl carrier protein reductase (BKR),
+ involved in Type II FAS, classical (c) SDRs; Region:
+ BKR_SDR_c; cd05333"
+ /db_xref="CDD:187594"
+ misc_feature complement(order(1734382..1734390,1734394..1734396,
+ 1734400..1734405,1734481..1734483,1734493..1734495,
+ 1734532..1734540,1734619..1734621,1734679..1734690,
+ 1734766..1734774,1734835..1734840,1734895..1734906,
+ 1734910..1734912))
+ /gene="fabG"
+ /locus_tag="SARI_01803"
+ /note="NAD(P) binding site [chemical binding]; other site"
+ /db_xref="CDD:187594"
+ misc_feature complement(order(1734220..1734222,1734226..1734264,
+ 1734271..1734273,1734283..1734288,1734292..1734297,
+ 1734304..1734306,1734313..1734324,1734328..1734336,
+ 1734397..1734399,1734433..1734438,1734442..1734459,
+ 1734463..1734468,1734475..1734480,1734487..1734492,
+ 1734499..1734522,1734568..1734570,1734577..1734582,
+ 1734589..1734594,1734598..1734603,1734610..1734615,
+ 1734625..1734627,1734634..1734639,1734646..1734654,
+ 1734658..1734669,1734745..1734747,1734862..1734864,
+ 1734874..1734876))
+ /gene="fabG"
+ /locus_tag="SARI_01803"
+ /note="homotetramer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:187594"
+ misc_feature complement(order(1734442..1734447,1734451..1734459,
+ 1734463..1734468,1734475..1734480,1734487..1734492,
+ 1734499..1734525,1734568..1734570,1734577..1734582,
+ 1734589..1734591,1734598..1734603,1734610..1734615,
+ 1734625..1734627,1734634..1734639,1734646..1734648,
+ 1734652..1734654,1734658..1734666))
+ /gene="fabG"
+ /locus_tag="SARI_01803"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:187594"
+ misc_feature complement(order(1734481..1734483,1734493..1734495,
+ 1734532..1734534,1734616..1734618))
+ /gene="fabG"
+ /locus_tag="SARI_01803"
+ /note="active site"
+ /db_xref="CDD:187594"
+ gene complement(1734958..1735887)
+ /locus_tag="SARI_01804"
+ CDS complement(1734958..1735887)
+ /locus_tag="SARI_01804"
+ /inference="protein motif:Gene3D:IPR001227"
+ /inference="protein motif:HMMPfam:IPR001227"
+ /inference="protein motif:HMMTigr:IPR004410"
+ /inference="similar to AA sequence:INSD:AAL20123.1"
+ /note="'KEGG: stm:STM1194 1.7e-159 fabD;
+ malonyl-CoA-[acyl-carrier-protein] transacylase K00645;
+ COG: COG0331 (acyl-carrier-protein) S-malonyltransferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="acyl carrier protein S-malonyltransferase"
+ /protein_id="YP_001570832.1"
+ /db_xref="GI:161503720"
+ /db_xref="InterPro:IPR001227"
+ /db_xref="InterPro:IPR004410"
+ /translation="MTQFAFVFPGQGSQSVGMLAEMAANYPIVEETFAEASAALGYDL
+ WALTQQGPAEELNKTWQTQPALLTASVALWRVWQQQGGKMPALMAGHSLGEYSALVCA
+ GVINFADAVRLVEMRGKFMQEAVPEGTGGMSAIIGLDDASIAKACEESAEGQVVSPVN
+ FNSPGQVVIAGHKEAVERAGAACKAAGAKRALPLPVSVPSHCALMKPAADKLAVELAK
+ ITFSAPTVPVVNNVDVKCETDAAAIRDALVRQLYNPVQWTKSVEFIAAQGVKHLYEVG
+ PGKVLTGLTKRIVDTLTASALNESAALSAALTQ"
+ misc_feature complement(1735018..1735887)
+ /locus_tag="SARI_01804"
+ /note="(acyl-carrier-protein) S-malonyltransferase [Lipid
+ metabolism]; Region: FabD; COG0331"
+ /db_xref="CDD:223408"
+ misc_feature complement(1735018..1735884)
+ /locus_tag="SARI_01804"
+ /note="malonyl CoA-acyl carrier protein transacylase;
+ Region: fabD; TIGR00128"
+ /db_xref="CDD:232839"
+ gene complement(1735903..1736856)
+ /locus_tag="SARI_01805"
+ CDS complement(1735903..1736856)
+ /locus_tag="SARI_01805"
+ /inference="protein motif:HMMPfam:IPR013747"
+ /inference="protein motif:HMMPfam:IPR013751"
+ /inference="protein motif:HMMTigr:IPR004655"
+ /inference="similar to AA sequence:INSD:AAX65047.1"
+ /note="FabH; beta-ketoacyl-acyl carrier protein synthase
+ III; catalyzes the condensation of acetyl-CoA with
+ malonyl-ACP to initiate cycles of fatty acid elongation;
+ differs from 3-oxoacyl-(acyl carrier protein) synthase I
+ and II in that it utilizes CoA thioesters as primers
+ rather than acyl-ACPs"
+ /codon_start=1
+ /transl_table=11
+ /product="3-oxoacyl-(acyl carrier protein) synthase III"
+ /protein_id="YP_001570833.1"
+ /db_xref="GI:161503721"
+ /db_xref="InterPro:IPR004655"
+ /db_xref="InterPro:IPR013747"
+ /db_xref="InterPro:IPR013751"
+ /translation="MYTKIIGTGSYLPEQVRTNADLEKMVETSDEWIVTRTGIRERHI
+ AAPNETVATMGFTAANRALEMAGIDKDQIGLIVVATTSATHAFPSAACQIQSMLGIKG
+ CPAFDVAAACAGFTYALSIADQYVKSGAVKHALVVGSDVLARTCDPSDRGTIIIFGDG
+ AGAVVLSASEEPGIISTHLHADGRYGELLTLPNADRVNPDNPIYLTMAGNEVFKVAVT
+ ELAHIVDETLAANNLDRSELDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTS
+ AASVPCALDEAVRDGRIKAGQLVLLEAFGGGFTWGSALIRF"
+ misc_feature complement(1735906..1736856)
+ /locus_tag="SARI_01805"
+ /note="3-oxoacyl-(acyl carrier protein) synthase III;
+ Reviewed; Region: PRK09352"
+ /db_xref="CDD:236475"
+ misc_feature complement(1735912..1736853)
+ /locus_tag="SARI_01805"
+ /note="Ketoacyl-acyl carrier protein synthase III (KASIII)
+ initiates the elongation in type II fatty acid synthase
+ systems. It is found in bacteria and plants. Elongation of
+ fatty acids in the type II systems occurs by Claisen
+ condensation of malonyl-acyl...; Region: KAS_III; cd00830"
+ /db_xref="CDD:238426"
+ misc_feature complement(order(1735936..1735938,1736284..1736289,
+ 1736305..1736322,1736425..1736427,1736482..1736487,
+ 1736494..1736499,1736506..1736508,1736530..1736550,
+ 1736572..1736574,1736581..1736583,1736608..1736610,
+ 1736614..1736616))
+ /locus_tag="SARI_01805"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238426"
+ misc_feature complement(order(1736035..1736037,1736125..1736127,
+ 1736521..1736523))
+ /locus_tag="SARI_01805"
+ /note="active site"
+ /db_xref="CDD:238426"
+ misc_feature complement(1736116..1736118)
+ /locus_tag="SARI_01805"
+ /note="CoA binding pocket [chemical binding]; other site"
+ /db_xref="CDD:238426"
+ gene complement(1736936..1737985)
+ /locus_tag="SARI_01806"
+ CDS complement(1736936..1737985)
+ /locus_tag="SARI_01806"
+ /inference="protein motif:BlastProDom:IPR003664"
+ /inference="protein motif:HMMPfam:IPR003664"
+ /inference="protein motif:HMMPIR:IPR012281"
+ /inference="protein motif:HMMTigr:IPR003664"
+ /inference="similar to AA sequence:INSD:CAD08316.1"
+ /note="involved in acylation of glycerol-3-phosphate to
+ form 1-acyl-glycerol-3 phosphate for use in phospholipid
+ biosynthesis; functions with PlsY"
+ /codon_start=1
+ /transl_table=11
+ /product="putative glycerol-3-phosphate acyltransferase
+ PlsX"
+ /protein_id="YP_001570834.1"
+ /db_xref="GI:161503722"
+ /db_xref="InterPro:IPR003664"
+ /db_xref="InterPro:IPR012281"
+ /translation="MGGDFGPSVTVPAALQALNANSQLTLLLVGNPDIITPLLAKADF
+ EQRSRLQIIPAQSVIASDARPSQAIRASRGTSMRVALELVKEGRAEACVSAGNTGALM
+ GLAKLLLKPLEGIERPALVTVLPHQHKGKTVVLDLGANVDCDSTMLVQFAVMGAVLAE
+ EVVGIKNPRVALLNIGEEETKGLDSIREASLTLKTVPSINYIGYLEANELLTGKTDVL
+ VCDGFTGNVTLKTMEGVVRMFLSLLKSQGEGKKRSWWLLLLKRWLQKSLMRRFSHLNP
+ DQYNGACLLGLRGTVIKSHGAANQRAFAVAIEQAVQAVQRQVPQRIAARLESVYPAGF
+ ESLDDGKSVNLRAHR"
+ misc_feature complement(1737083..1737985)
+ /locus_tag="SARI_01806"
+ /note="putative phosphate acyltransferase; Provisional;
+ Region: PRK05331"
+ /db_xref="CDD:235414"
+ unsure 1737081..1737319
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(1738150..1738323)
+ /gene="rpmF"
+ /locus_tag="SARI_01807"
+ CDS complement(1738150..1738323)
+ /gene="rpmF"
+ /locus_tag="SARI_01807"
+ /inference="protein motif:HMMPfam:IPR002677"
+ /inference="protein motif:HMMTigr:IPR002677"
+ /inference="similar to AA sequence:INSD:AAZ87834.1"
+ /note="some L32 proteins have zinc finger motifs
+ consisting of CXXC while others do not"
+ /codon_start=1
+ /transl_table=11
+ /product="50S ribosomal protein L32"
+ /protein_id="YP_001570835.1"
+ /db_xref="GI:161503723"
+ /db_xref="InterPro:IPR002677"
+ /translation="MAVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHIT
+ ADGYYRGRKVIAK"
+ misc_feature complement(1738153..1738323)
+ /gene="rpmF"
+ /locus_tag="SARI_01807"
+ /note="50S ribosomal protein L32; Validated; Region: rpmF;
+ PRK01110"
+ /db_xref="CDD:234901"
+ gene complement(1738375..1738896)
+ /locus_tag="SARI_01808"
+ CDS complement(1738375..1738896)
+ /locus_tag="SARI_01808"
+ /inference="protein motif:HMMPfam:IPR003772"
+ /inference="similar to AA sequence:INSD:AAL20119.1"
+ /note="'COG: COG1399 Predicted metal-binding, possibly
+ nucleic acid-binding protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570836.1"
+ /db_xref="GI:161503724"
+ /db_xref="InterPro:IPR003772"
+ /translation="MQKVKLPLTLDPVRTAQKRLDYQGIYTPDQVERVAESVVSVDSD
+ VECSMSFAIDNQRLAVLTGDAMVTVSLECQRCGKPFTHQVHITYCFSPVRSDEQAEAL
+ PEAYEPIEVNDFGEIDLLAMVEDEIILTLPVVPVHDSEHCEVSEADMVFGELPDEAQK
+ PNPFAVLASLKRK"
+ misc_feature complement(1738381..1738896)
+ /locus_tag="SARI_01808"
+ /note="hypothetical protein; Provisional; Region:
+ PRK11193"
+ /db_xref="CDD:236878"
+ gene complement(1738933..1739100)
+ /locus_tag="SARI_01810"
+ misc_RNA complement(1738933..1739100)
+ /locus_tag="SARI_01810"
+ /product="SraB RNA"
+ /inference="nucleotide motif:Rfam:RF00077"
+ /note="Rfam score 180.37"
+ gene 1739094..1739678
+ /locus_tag="SARI_01809"
+ CDS 1739094..1739678
+ /locus_tag="SARI_01809"
+ /inference="protein motif:HMMPfam:IPR003697"
+ /inference="protein motif:HMMTigr:IPR003697"
+ /inference="similar to AA sequence:REFSEQ:YP_150900.1"
+ /note="Maf; overexpression in Bacillus subtilis inhibits
+ septation in the dividing cell"
+ /codon_start=1
+ /transl_table=11
+ /product="Maf-like protein"
+ /protein_id="YP_001570837.1"
+ /db_xref="GI:161503725"
+ /db_xref="InterPro:IPR003697"
+ /translation="MPRLILASTSPWRRALLEKLTIPFECAAPEVDETPIQGEAPRQL
+ VLRLAQAKAQSLAHRYPAHLIIGSDQICVLDGEITGKPLTEENARQQLLKARGNIVTF
+ YTGLALYNSATGHLQTEVEPFDVHFRHLSETEIEDYVRKERPLHCAGSFKSEGLGIAL
+ FERLEGRDPNTLIGLPLIALCQMLRREEMNPLNA"
+ misc_feature 1739097..1739654
+ /locus_tag="SARI_01809"
+ /note="Maf-like protein; Region: Maf; pfam02545"
+ /db_xref="CDD:202278"
+ misc_feature 1739103..1739645
+ /locus_tag="SARI_01809"
+ /note="Nucleotide binding protein Maf. Maf has been
+ implicated in inhibition of septum formation in
+ eukaryotes, bacteria and archaea, but homologs in
+ B.subtilis and S.cerevisiae are nonessential for cell
+ division. Maf has been predicted to be a nucleotide-
+ or...; Region: Maf; cd00555"
+ /db_xref="CDD:238310"
+ misc_feature order(1739115..1739117,1739130..1739132,1739190..1739192,
+ 1739247..1739249,1739298..1739300,1739334..1739336)
+ /locus_tag="SARI_01809"
+ /note="active site"
+ /db_xref="CDD:238310"
+ misc_feature order(1739229..1739231,1739436..1739453)
+ /locus_tag="SARI_01809"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238310"
+ gene complement(1739737..1740690)
+ /locus_tag="SARI_01811"
+ CDS complement(1739737..1740690)
+ /locus_tag="SARI_01811"
+ /inference="protein motif:BlastProDom:IPR006145"
+ /inference="protein motif:HMMPfam:IPR002942"
+ /inference="protein motif:HMMPfam:IPR006145"
+ /inference="protein motif:HMMSmart:IPR002942"
+ /inference="protein motif:HMMTigr:IPR006225"
+ /inference="protein motif:ScanRegExp:IPR006224"
+ /inference="similar to AA sequence:REFSEQ:YP_216121.1"
+ /note="'catalyzes the transformation of uracil to
+ pseudouracil at nucleotides U955, U2504, and U2580 in 23S
+ rRNA'"
+ /codon_start=1
+ /transl_table=11
+ /product="23S rRNA pseudouridylate synthase C"
+ /protein_id="YP_001570838.1"
+ /db_xref="GI:161503726"
+ /db_xref="InterPro:IPR002942"
+ /db_xref="InterPro:IPR006145"
+ /db_xref="InterPro:IPR006224"
+ /db_xref="InterPro:IPR006225"
+ /translation="MKTETPSVKIVAITADEAGQRIDNFLRTQLKGVPKSMIYRILRK
+ GEVRVNKKRIKPEYKLEAGDEVRIPPVRVAEREEEAVSPHLQKVAALADVILYEDDYL
+ LVLNKPSGTAVHGGSGLSFGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSAL
+ RSLHEQLREKGMQKDYLALVRGQWQSHVKTVQAPLLKNILQSGERIVRVSQEGKPSET
+ RFKVEERFAFATLVRCSPVTGRTHQIRVHTQYVGHPIAFDDRYGDREFDKQLAGTGLS
+ RLFLHAAALKFTHPGTGDVLRIEAPMDDQLKRCLQVLRNPA"
+ misc_feature complement(1739746..1740690)
+ /locus_tag="SARI_01811"
+ /note="23S rRNA pseudouridylate synthase C; Provisional;
+ Region: PRK11025"
+ /db_xref="CDD:182909"
+ misc_feature complement(<1740499..1740633)
+ /locus_tag="SARI_01811"
+ /note="S4/Hsp/ tRNA synthetase RNA-binding domain; The
+ domain surface is populated by conserved, charged residues
+ that define a likely RNA-binding site; Found in stress
+ proteins, ribosomal proteins and tRNA synthetases; This
+ may imply a hitherto unrecognized...; Region: S4; cd00165"
+ /db_xref="CDD:238095"
+ misc_feature complement(order(1740508..1740510,1740514..1740528,
+ 1740529..1740534,1740553..1740555,1740559..1740564,
+ 1740571..1740576,1740580..1740585,1740589..1740594,
+ 1740628..1740630))
+ /locus_tag="SARI_01811"
+ /note="RNA binding surface [nucleotide binding]; other
+ site"
+ /db_xref="CDD:238095"
+ misc_feature complement(1739830..1740387)
+ /locus_tag="SARI_01811"
+ /note="Pseudouridine synthase, RsuA/RluD family; Region:
+ PseudoU_synth_RluCD_like; cd02869"
+ /db_xref="CDD:211346"
+ misc_feature complement(order(1739956..1739958,1740259..1740270))
+ /locus_tag="SARI_01811"
+ /note="active site"
+ /db_xref="CDD:211346"
+ misc_feature 1740902..1741239
+ /inference="nucleotide motif:Rfam:RF00040"
+ /note="RNAse e 5' utr element"
+ gene 1741264..1744473
+ /gene="rne"
+ /locus_tag="SARI_01812"
+ CDS 1741264..1744473
+ /gene="rne"
+ /locus_tag="SARI_01812"
+ /inference="protein motif:Gene3D:IPR012340"
+ /inference="protein motif:HMMPfam:IPR003029"
+ /inference="protein motif:HMMSmart:IPR003029"
+ /inference="protein motif:HMMTigr:IPR004659"
+ /inference="protein motif:superfamily:IPR008994"
+ /note="'bifunctional ribonuclease
+ E/endoribonuclease/RNA-binding protein/RNA degradosome
+ binding protein; forms part of the membrane-associated
+ degradosome complex along with PNPase, RhlB, and enolase'"
+ /codon_start=1
+ /transl_table=11
+ /product="ribonuclease E"
+ /protein_id="YP_001570839.1"
+ /db_xref="GI:161503727"
+ /db_xref="InterPro:IPR003029"
+ /db_xref="InterPro:IPR004659"
+ /db_xref="InterPro:IPR008994"
+ /db_xref="InterPro:IPR012340"
+ /translation="MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKG
+ KITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIV
+ QIDKEERGNKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLEL
+ PEGMGLIVRTAGVGKSADALQWDLSFRLKHWEAIQKAAESRPAPFLIHQESNVIVRAF
+ RDYLRQDIGEILIDNPKVLELARQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIE
+ SAFQREVRLPSGGSIVIDSTEALTAIDINSARATRGGDIEETAFNTNLEAADEIARQL
+ RLRDLGGLIVIDFIDMTPVRHQRAVENRLREAVRQDRARIQISHISRFGLLEMSRQRL
+ SPSLGESSHHVCPRCSGTGTVRDNESLSLSILRLIEEEALKENTQEVHAIVPVPIASY
+ LLNEKRTAVNAIETRQDGVRCVIVPNDQMETPHYSVLRVRKGEETPTLSYMLPKLHEE
+ AMALPSEEEYAERKRPEQPALATFAMPEVPPAPTPAEPTVNVATAKNANVAAAQPAQP
+ GLFSRFLNALKQLFSGDEETKTVEKAAPKVEEKPERQQDRRKPRQNNRRDRNERRDTR
+ DNRAERDGSESRDDNRRNRRQAQQQNAETRDTRQQETTEKVKTSDEQQQTPRRERNRR
+ RNDEKRQAQQEVKALNREEQPVQETEQEERVQQVQPRRKQRQLNQKVRFTNSATVETV
+ DTPVVIDEPRPVENVEQPVPAPRTELAKVDLPVVADIAPEQDDTVEPRDNTGMPRRSR
+ RSPRHLRVSGQRRRRYRDERYPTQSPMPLTVACASPEMASGKVWIRYPIVRPQETQVE
+ EQREPELALPQPVVAEPQVIAAAEAFEPETPVQEVENESVAVEPQVAAESQAPEAVDF
+ ETTHPEVIAAPVDEQPQLIAESDTPIAQAVIADAEPVAETADTSITVTESVADVVVVE
+ PEEETKTEAAVVEHTAEETVIAPVQADEKTEDVVCVDDHNHASAPMTRAPAPEYVPEA
+ PHHSDWQRPTFHFEGKGAAGGHSATRHASAPAARPQPVE"
+ misc_feature 1741264..1744461
+ /gene="rne"
+ /locus_tag="SARI_01812"
+ /note="ribonuclease E; Reviewed; Region: rne; PRK10811"
+ /db_xref="CDD:236766"
+ misc_feature 1741357..1741635
+ /gene="rne"
+ /locus_tag="SARI_01812"
+ /note="S1_RNase_E: RNase E and RNase G, S1-like
+ RNA-binding domain. RNase E is an essential
+ endoribonuclease in the processing and degradation of RNA.
+ In addition to its role in mRNA degradation, RNase E has
+ also been implicated in the processing of rRNA, and...;
+ Region: S1_RNase_E; cd04453"
+ /db_xref="CDD:239900"
+ misc_feature order(1741390..1741392,1741546..1741548,1741558..1741560)
+ /gene="rne"
+ /locus_tag="SARI_01812"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:239900"
+ misc_feature order(1741462..1741464,1741579..1741581,1741588..1741590,
+ 1741597..1741602,1741630..1741632)
+ /gene="rne"
+ /locus_tag="SARI_01812"
+ /note="oligonucleotide binding site [chemical binding];
+ other site"
+ /db_xref="CDD:239900"
+ misc_feature 1744348..1744464
+ /gene="rne"
+ /locus_tag="SARI_01812"
+ /note="Polyribonucleotide phosphorylase C terminal;
+ Region: PNPase_C; pfam12111"
+ /db_xref="CDD:152546"
+ gene complement(1744724..1745677)
+ /gene="flgL"
+ /locus_tag="SARI_01813"
+ CDS complement(1744724..1745677)
+ /gene="flgL"
+ /locus_tag="SARI_01813"
+ /inference="protein motif:BlastProDom:IPR001029"
+ /inference="protein motif:HMMPfam:IPR001492"
+ /inference="protein motif:HMMTigr:IPR013384"
+ /inference="similar to AA sequence:REFSEQ:YP_150904.1"
+ /note="'with FlgK acts as a hook filament junction protein
+ to join the flagellar filament to the hook; Yersinia,
+ Vibrio parahaemolyticus, Bradyrhizobium and other
+ organisms have 2 copies of this and other flagellar
+ genes'"
+ /codon_start=1
+ /transl_table=11
+ /product="flagellar hook-associated protein FlgL"
+ /protein_id="YP_001570840.1"
+ /db_xref="GI:161503728"
+ /db_xref="InterPro:IPR001029"
+ /db_xref="InterPro:IPR001492"
+ /db_xref="InterPro:IPR013384"
+ /translation="MRISTQMMYEQNMSGITNSQAEWMKLGEQMSSGKRVTNPSDDPI
+ AASQAVVLSQAQAQNSQYALARTFATQKVSLEESVLSQVTTAIQTAQEKIVYAGNGTL
+ SDDDRASLATDLQGIRDQLMNLANSTDGNGRYIFAGYKTEAAPFDQATGNYHGGEKNV
+ TQQVDSARTMVIGHTGAQIFNSLTSNAVPEPDGTDSEKNLFVMLDTAIAALNTPVEGN
+ DVEKEKAAAAIDKTSRGLKNSLNNVLTVRAELGTQLGELSTLDALGSDRALGQKLQMS
+ NLVDVDWNSVISSYVMQQAALQASYKTFTDMQGMSLFQLNR"
+ misc_feature complement(1744727..1745677)
+ /gene="flgL"
+ /locus_tag="SARI_01813"
+ /note="flagellar hook-associated protein FlgL; Reviewed;
+ Region: flgL; PRK08027"
+ /db_xref="CDD:181202"
+ misc_feature complement(1745255..1745671)
+ /gene="flgL"
+ /locus_tag="SARI_01813"
+ /note="Bacterial flagellin N-terminal helical region;
+ Region: Flagellin_N; pfam00669"
+ /db_xref="CDD:216053"
+ gene complement(1745692..1747353)
+ /gene="flgK"
+ /locus_tag="SARI_01814"
+ CDS complement(1745692..1747353)
+ /gene="flgK"
+ /locus_tag="SARI_01814"
+ /inference="protein motif:HMMPfam:IPR001444"
+ /inference="protein motif:HMMPfam:IPR010930"
+ /inference="protein motif:HMMTigr:IPR002371"
+ /inference="protein motif:ScanRegExp:IPR001444"
+ /inference="similar to AA sequence:INSD:AAX65036.1"
+ /note="with FlgL acts as a hook filament junction protein
+ to join the flagellar filament to the hook"
+ /codon_start=1
+ /transl_table=11
+ /product="flagellar hook-associated protein FlgK"
+ /protein_id="YP_001570841.1"
+ /db_xref="GI:161503729"
+ /db_xref="InterPro:IPR001444"
+ /db_xref="InterPro:IPR002371"
+ /db_xref="InterPro:IPR010930"
+ /translation="MSSLINHAMSGLNAAQSALNTVSNNINNYNVAGYTRQTTILAQA
+ NSTLGAGGWIGNGVYVSGVQREYDAFITNQLRGAQNQSSGLTTRYEQMSKIDNLLADK
+ SSSLSGSLQSFFTSLQTLVSNAEDPAARQALIGKAEGLVNQFKTTDQYLRDQDKQVNI
+ AIGSSVAQINNYAKQIANLNDQISRLTGVGAGASPNDLLDQRDQLVSELNKIVGVEVS
+ VQDGGTYNLTMANGYTLVQGATARQLAAVPSSADPTRTTVAYVDEAAGNIEIPEKLLN
+ TGSLGGLLTFRSQDLDQTRNTLGQLALAFADAFNAQHTKGYDADGNKGKDFFGIGSPV
+ VYSNSNNADKTVSLTAEVVDSTKVQATDYQIVFDGTDWQVTRLADNTTFTATKDVDGK
+ LEIDGLKVTVGTGAQKNDSFLLKPVSNAIVDMKVKVTNEAEIAMAAESKLDPDVDTGD
+ SDNRNGQALLDLQNSNVVGGNKTFNDAYATLVSDVGNKTSTLKTSSTTQANVVKQLYK
+ QQQSVSGVNLDEEYGNLQRYQQYYLANAQVLQTANTLFDALLSIR"
+ misc_feature complement(1745695..1747353)
+ /gene="flgK"
+ /locus_tag="SARI_01814"
+ /note="flagellar hook-associated protein FlgK; Validated;
+ Region: flgK; PRK08147"
+ /db_xref="CDD:236165"
+ misc_feature complement(1745698..>1745814)
+ /gene="flgK"
+ /locus_tag="SARI_01814"
+ /note="Flagellar basal body rod FlgEFG protein C-terminal;
+ Region: Flg_bbr_C; pfam06429"
+ /db_xref="CDD:219024"
+ gene complement(1747418..1748368)
+ /gene="flgJ"
+ /locus_tag="SARI_01815"
+ CDS complement(1747418..1748368)
+ /gene="flgJ"
+ /locus_tag="SARI_01815"
+ /inference="protein motif:HMMPfam:IPR002901"
+ /inference="protein motif:HMMSmart:IPR013338"
+ /inference="protein motif:HMMTigr:IPR013377"
+ /inference="similar to AA sequence:SwissProt:P15931"
+ /note="Flagellum-specific muramidase which hydrolyzes the
+ peptidoglycan layer to assemble the rod structure in the
+ periplasmic space"
+ /codon_start=1
+ /transl_table=11
+ /product="flagellar rod assembly protein/muramidase FlgJ"
+ /protein_id="YP_001570842.1"
+ /db_xref="GI:161503730"
+ /db_xref="InterPro:IPR002901"
+ /db_xref="InterPro:IPR013338"
+ /db_xref="InterPro:IPR013377"
+ /translation="MIGDGKLLASAAWDAQSLNELKAKAGQDPAANIRPVARQVEGMF
+ VQMMLKSMREALPKDGLFSSDQTRLYTSMYDQQIAQQMTAGKGLGLADMMVKQMTSGQ
+ SMPADDAPQVPLKFSLETVNSYQNQALTQLVRKAMPKTPDSSDEPLSGDSKDFLARLS
+ LPARLASEQSGVPHHLILAQAALESGWGQRQILRENGEPSYNVFGVKATASWKGPVTE
+ ITTTEYENGEAKKVKAKFRVYNSYLEALSDYVELLTRNPRYAAVTTAATAEQGAVALQ
+ NAGYATDPHYARKLTSMIQQLKAMSEKVSKTYSANLDNLF"
+ misc_feature complement(1747433..1748365)
+ /gene="flgJ"
+ /locus_tag="SARI_01815"
+ /note="flagellar rod assembly protein/muramidase FlgJ;
+ Validated; Region: flgJ; PRK05684"
+ /db_xref="CDD:235559"
+ misc_feature complement(1747904..1748362)
+ /gene="flgJ"
+ /locus_tag="SARI_01815"
+ /note="Rod binding protein [Cell envelope biogenesis,
+ outer membrane / Cell motility and secretion /
+ Posttranslational modification, protein turnover,
+ chaperones]; Region: COG3951"
+ /db_xref="CDD:226460"
+ misc_feature complement(1747421..1747945)
+ /gene="flgJ"
+ /locus_tag="SARI_01815"
+ /note="Muramidase (flagellum-specific) [Cell motility and
+ secretion / Intracellular trafficking and secretion];
+ Region: FlgJ; COG1705"
+ /db_xref="CDD:224619"
+ gene complement(1748368..1749471)
+ /gene="flgI"
+ /locus_tag="SARI_01816"
+ CDS complement(1748368..1749471)
+ /gene="flgI"
+ /locus_tag="SARI_01816"
+ /inference="protein motif:FPrintScan:IPR001782"
+ /inference="protein motif:HMMPfam:IPR001782"
+ /inference="similar to AA sequence:REFSEQ:NP_455674.1"
+ /note="'part of the basal body which consists of four
+ rings L, P, S, and M mounted on a central rod; Vibrio
+ parahaemolyticus, Yersinia, Bradyrhizobium and other
+ bacteria have two copies of this and other flagellar
+ genes; the V. parahaemolyticus protein is associated with
+ the polar flagella and the Bradyrhizobium protein is
+ associated with the thick flagellum'"
+ /codon_start=1
+ /transl_table=11
+ /product="flagellar basal body P-ring protein"
+ /protein_id="YP_001570843.1"
+ /db_xref="GI:161503731"
+ /db_xref="InterPro:IPR001782"
+ /translation="MYVFKALAGIVLALVATLAHAERIRDLTSVQGVRENSLIGYGLV
+ VGLDGTGDQTTQTPFTTQTLNNMLSQLGITVPTGTNMQLKNVAAVMVTASYPPFARQG
+ QTIDVVVSSMGNAKSLRGGTLLMTPLKGVDSQVYALAQGNILVGGAGASAGGSSVQVN
+ QLNGGRITNGAIIERELPSQFGAGNTINLQLNDEDFTMAQQITDAINRARGYGSATAL
+ DARTVQVRVPSGNSSQVRFLADIQNMEVNVTPQDAKVVINSRTGSVVMNREVTLDSCA
+ VAQGNLSVTVNRQLNVNQPNTPFGGGQTVVTPQTQIDLRQSGGSLQSVRSSANLNSVV
+ RALNALGATPMDLMSILQSMQSAGCLRAKLEII"
+ misc_feature complement(1748371..1749471)
+ /gene="flgI"
+ /locus_tag="SARI_01816"
+ /note="flagellar basal body P-ring protein; Provisional;
+ Region: flgI; PRK05303"
+ /db_xref="CDD:235399"
+ misc_feature complement(1748374..1749444)
+ /gene="flgI"
+ /locus_tag="SARI_01816"
+ /note="flagellar basal body P-ring protein; Reviewed;
+ Region: flgI; cl14622"
+ /db_xref="CDD:187395"
+ gene complement(1749477..1750184)
+ /gene="flgH"
+ /locus_tag="SARI_01817"
+ CDS complement(1749477..1750184)
+ /gene="flgH"
+ /locus_tag="SARI_01817"
+ /inference="protein motif:HMMPfam:IPR000527"
+ /inference="similar to AA sequence:REFSEQ:YP_216114.1"
+ /note="'part of the flagellar basal body which consists of
+ four rings L,P, S and M mounted on a central rod'"
+ /codon_start=1
+ /transl_table=11
+ /product="flagellar basal body L-ring protein"
+ /protein_id="YP_001570844.1"
+ /db_xref="GI:161503732"
+ /db_xref="InterPro:IPR000527"
+ /translation="MKVMQKYALHAYPLMALVVATLTGCAWIPSKPLVQGATTAQPIP
+ GPVPVANGSIFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRD
+ GKTSFGFDTVPRYLQGLFGNSRADMEASGGNSFNGKGGANASNTFSGTLTVTVDQVLA
+ NGNLHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNSVPSTQVADARIEYVGNGYINE
+ AQNMGWLQRFFLNLSPM"
+ misc_feature complement(1749489..1750157)
+ /gene="flgH"
+ /locus_tag="SARI_01817"
+ /note="Flagellar basal body L-ring protein [Cell motility
+ and secretion]; Region: FlgH; COG2063"
+ /db_xref="CDD:224974"
+ misc_feature complement(1749480..1750139)
+ /gene="flgH"
+ /locus_tag="SARI_01817"
+ /note="flagellar basal body L-ring protein; Reviewed;
+ Region: flgH; PRK00249"
+ /db_xref="CDD:234700"
+ gene complement(1750232..1751014)
+ /gene="flgG"
+ /locus_tag="SARI_01818"
+ CDS complement(1750232..1751014)
+ /gene="flgG"
+ /locus_tag="SARI_01818"
+ /inference="protein motif:HMMPfam:IPR001444"
+ /inference="protein motif:HMMPfam:IPR010930"
+ /inference="protein motif:HMMTigr:IPR012834"
+ /inference="protein motif:ScanRegExp:IPR001444"
+ /inference="similar to AA sequence:INSD:AAO69365.1"
+ /note="makes up the distal portion of the flagellar basal
+ body rod"
+ /codon_start=1
+ /transl_table=11
+ /product="flagellar basal body rod protein FlgG"
+ /protein_id="YP_001570845.1"
+ /db_xref="GI:161503733"
+ /db_xref="InterPro:IPR001444"
+ /db_xref="InterPro:IPR010930"
+ /db_xref="InterPro:IPR012834"
+ /translation="MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDL
+ LYQTIRQPGAQSSEQTTLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGF
+ FQVMLPDGTSAYTRDGSFQVDQNGQLVTAGGFQVQPAITIPANALNITIGRDGVVSVT
+ QQGQAAPVQVGQLNLTTFMNDTGLESIGENLYIETQSSGAPNESTPGLNGAGLLYQGY
+ VETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL"
+ misc_feature complement(1750235..1751014)
+ /gene="flgG"
+ /locus_tag="SARI_01818"
+ /note="flagellar basal body rod protein FlgG; Provisional;
+ Region: flgG; PRK12693"
+ /db_xref="CDD:183687"
+ misc_feature complement(1750910..1751002)
+ /gene="flgG"
+ /locus_tag="SARI_01818"
+ /note="Flagella basal body rod protein; Region:
+ Flg_bb_rod; pfam00460"
+ /db_xref="CDD:109515"
+ misc_feature complement(1750235..1750468)
+ /gene="flgG"
+ /locus_tag="SARI_01818"
+ /note="Flagellar basal body rod FlgEFG protein C-terminal;
+ Region: Flg_bbr_C; pfam06429"
+ /db_xref="CDD:219024"
+ gene complement(1751028..1751783)
+ /gene="flgF"
+ /locus_tag="SARI_01819"
+ CDS complement(1751028..1751783)
+ /gene="flgF"
+ /locus_tag="SARI_01819"
+ /inference="protein motif:HMMPfam:IPR001444"
+ /inference="protein motif:HMMPfam:IPR010930"
+ /inference="protein motif:HMMTigr:IPR012836"
+ /inference="protein motif:ScanRegExp:IPR001444"
+ /inference="similar to AA sequence:REFSEQ:NP_460149.1"
+ /note="'FlgF, with FlgB and C, makes up the proximal
+ portion of the flagellar basal body rod'"
+ /codon_start=1
+ /transl_table=11
+ /product="flagellar basal body rod protein FlgF"
+ /protein_id="YP_001570846.1"
+ /db_xref="GI:161503734"
+ /db_xref="InterPro:IPR001444"
+ /db_xref="InterPro:IPR010930"
+ /db_xref="InterPro:IPR012836"
+ /translation="MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV
+ PVDGLSLATRTLVTASTPGADMTPGQLDYTSRPLDVALQQDGWLVVQAADGAEGYTRN
+ GNIQVGPTGQLTIQGHPVIGEGGPITVPEGAEITIAADGTISALNPGDPPNTVAPVGQ
+ LKLVKAEGHEVQRGDDGLFRLTADAQASRGAVLAADPSIRIMSGVLEGSNVKPVEAMT
+ DMIANARRFEMQMKVITSVDENEGRANQLLSMS"
+ misc_feature complement(1751031..1751783)
+ /gene="flgF"
+ /locus_tag="SARI_01819"
+ /note="Flagellar basal body rod protein [Cell motility and
+ secretion]; Region: FlgF; COG4787"
+ /db_xref="CDD:227126"
+ misc_feature complement(1751679..1751771)
+ /gene="flgF"
+ /locus_tag="SARI_01819"
+ /note="Flagella basal body rod protein; Region:
+ Flg_bb_rod; pfam00460"
+ /db_xref="CDD:109515"
+ misc_feature complement(1751100..1751405)
+ /gene="flgF"
+ /locus_tag="SARI_01819"
+ /note="flagellar basal-body rod protein FlgF; Region:
+ flgF; TIGR02490"
+ /db_xref="CDD:233892"
+ gene complement(1751804..1753012)
+ /gene="flgE"
+ /locus_tag="SARI_01820"
+ CDS complement(1751804..1753012)
+ /gene="flgE"
+ /locus_tag="SARI_01820"
+ /inference="protein motif:HMMPfam:IPR001444"
+ /inference="protein motif:HMMPfam:IPR010930"
+ /inference="protein motif:HMMPfam:IPR011491"
+ /inference="protein motif:ScanRegExp:IPR001444"
+ /inference="similar to AA sequence:INSD:AAO69367.1"
+ /note="the hook connects flagellar basal body to the
+ flagellar filament"
+ /codon_start=1
+ /transl_table=11
+ /product="flagellar hook protein FlgE"
+ /protein_id="YP_001570847.1"
+ /db_xref="GI:161503735"
+ /db_xref="InterPro:IPR001444"
+ /db_xref="InterPro:IPR010930"
+ /db_xref="InterPro:IPR011491"
+ /translation="MSFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA
+ GSKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKL
+ DENRNLVNMQGMQLTGYPATGTPPTIQQGANPAPITIPNTLMAAKSTTTASMQVNLNS
+ TDPVPTKAFNPADADSYNKKGTVTVYDSQGNAHDMNVYFVKTKDNEWAVYTHDSSDPT
+ ATAPTAASTTLKFNENGILESGGTVNITTGTINGATAATFSLNFLNSMQQNTGANNIV
+ ATNQNGYKPGDLVSYQINNDGTVVGNYSNEQEQVLGQIVLANFANNEGLASQGDNVWA
+ ATQASGVALLGTAGSGNFGKLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQD
+ QILNTLVNLR"
+ misc_feature complement(1751807..1753012)
+ /gene="flgE"
+ /locus_tag="SARI_01820"
+ /note="flagellar hook protein FlgE; Validated; Region:
+ flgE; PRK05682"
+ /db_xref="CDD:235557"
+ misc_feature complement(1752914..1753006)
+ /gene="flgE"
+ /locus_tag="SARI_01820"
+ /note="Flagella basal body rod protein; Region:
+ Flg_bb_rod; pfam00460"
+ /db_xref="CDD:109515"
+ misc_feature complement(1752164..1752508)
+ /gene="flgE"
+ /locus_tag="SARI_01820"
+ /note="Flagellar basal body protein FlaE; Region: FlaE;
+ pfam07559"
+ /db_xref="CDD:219465"
+ misc_feature complement(1751810..1752046)
+ /gene="flgE"
+ /locus_tag="SARI_01820"
+ /note="Flagellar basal body rod FlgEFG protein C-terminal;
+ Region: Flg_bbr_C; pfam06429"
+ /db_xref="CDD:219024"
+ gene complement(1753039..1753737)
+ /gene="flgD"
+ /locus_tag="SARI_01821"
+ CDS complement(1753039..1753737)
+ /gene="flgD"
+ /locus_tag="SARI_01821"
+ /inference="protein motif:HMMPfam:IPR005648"
+ /inference="similar to AA sequence:INSD:AAO69368.1"
+ /note="'acts as a scaffold for the assembly of hook
+ proteins onto the flagellar basal body rod; Yersinia,
+ Vibrio parahaemolyticus, Bradyrhizobium and other
+ organisms have 2 copies of some flagellar genes; in V.
+ parahaemolyticus one set used for lateral flagella
+ production and the other is used for the polar flagella
+ production'"
+ /codon_start=1
+ /transl_table=11
+ /product="flagellar basal body rod modification protein"
+ /protein_id="YP_001570848.1"
+ /db_xref="GI:161503736"
+ /db_xref="InterPro:IPR005648"
+ /translation="MSIAVNMNDPTNTGVKTTTGSGSMTGNNAADLQSSFLTLLVAQL
+ KNQDPTNPLQNNELTTQLAQISTVSGIEKLNTTLGAISGQIDNSQSLQATTLIGHGVM
+ VPGTTILAGKGAEEGAVTSTTPFGVELQQPADKVTATITDKDGRVVRTLEIGELKAGV
+ HTFTWDGKQTDGTSVPNGSYNIAITASNGGTQLVAQPLQFALVQGVTKGSNGNLLDLG
+ TYGTTTLDEVRQII"
+ misc_feature complement(1753099..1753653)
+ /gene="flgD"
+ /locus_tag="SARI_01821"
+ /note="flagellar basal body rod modification protein;
+ Reviewed; Region: flgD; PRK06655"
+ /db_xref="CDD:235847"
+ misc_feature complement(1753495..>1753653)
+ /gene="flgD"
+ /locus_tag="SARI_01821"
+ /note="Flagellar hook capping protein - N-terminal region;
+ Region: FlgD; pfam03963"
+ /db_xref="CDD:202834"
+ misc_feature complement(1753102..1753473)
+ /gene="flgD"
+ /locus_tag="SARI_01821"
+ /note="FlgD Tudor-like domain; Region: FLgD_tudor;
+ pfam13861"
+ /db_xref="CDD:222423"
+ gene complement(1753749..1754153)
+ /gene="flgC"
+ /locus_tag="SARI_01822"
+ CDS complement(1753749..1754153)
+ /gene="flgC"
+ /locus_tag="SARI_01822"
+ /inference="protein motif:HMMPfam:IPR001444"
+ /inference="protein motif:HMMPfam:IPR010930"
+ /inference="protein motif:HMMTigr:IPR006299"
+ /inference="protein motif:ScanRegExp:IPR001444"
+ /inference="similar to AA sequence:INSD:AAL20105.1"
+ /note="with FlgF and B makes up the proximal portion of
+ the flagellar basal body rod"
+ /codon_start=1
+ /transl_table=11
+ /product="flagellar basal body rod protein FlgC"
+ /protein_id="YP_001570849.1"
+ /db_xref="GI:161503737"
+ /db_xref="InterPro:IPR001444"
+ /db_xref="InterPro:IPR006299"
+ /db_xref="InterPro:IPR010930"
+ /translation="MALLNIFDIAGSALTAQSKRLNVAASNLANADSVTGPDGQPYRA
+ KQVVFQVDAAPGQATGGVKVASVIESQAPEKLVYEPGNPLADANGYVKMPNVDVVGEM
+ VNTMSASRSYQANVEVLNTVKSMMLKTLTLGQ"
+ misc_feature complement(1753752..1754153)
+ /gene="flgC"
+ /locus_tag="SARI_01822"
+ /note="flagellar basal body rod protein FlgC; Reviewed;
+ Region: flgC; PRK05681"
+ /db_xref="CDD:235556"
+ misc_feature complement(1754052..1754135)
+ /gene="flgC"
+ /locus_tag="SARI_01822"
+ /note="Flagella basal body rod protein; Region:
+ Flg_bb_rod; pfam00460"
+ /db_xref="CDD:109515"
+ misc_feature complement(1753758..>1753895)
+ /gene="flgC"
+ /locus_tag="SARI_01822"
+ /note="Flagellar basal body rod FlgEFG protein C-terminal;
+ Region: Flg_bbr_C; pfam06429"
+ /db_xref="CDD:219024"
+ gene complement(1754157..1754573)
+ /gene="flgB"
+ /locus_tag="SARI_01823"
+ CDS complement(1754157..1754573)
+ /gene="flgB"
+ /locus_tag="SARI_01823"
+ /inference="protein motif:HMMPfam:IPR001444"
+ /inference="protein motif:HMMTigr:IPR006300"
+ /inference="protein motif:ScanRegExp:IPR001444"
+ /inference="similar to AA sequence:SwissProt:P16437"
+ /note="with FlgF and C makes up the proximal portion of
+ the flagellar basal body rod; Vibrio parahaemolyticus
+ protein is associated with the polar flagella"
+ /codon_start=1
+ /transl_table=11
+ /product="flagellar basal body rod protein FlgB"
+ /protein_id="YP_001570850.1"
+ /db_xref="GI:161503738"
+ /db_xref="InterPro:IPR001444"
+ /db_xref="InterPro:IPR006300"
+ /translation="MLDRLDAALRFQQEALNLRAQRQEILAANIANADTPGYQARDID
+ FASELKKVMVRGREETGGVSLTLTSSHHIPAQAVSSPAVDLLYRVPDQPSLDGNTVDM
+ DRERAQFADNSLKYQMGLTVLGSQLKGMMNVLQGGN"
+ misc_feature complement(1754160..1754573)
+ /gene="flgB"
+ /locus_tag="SARI_01823"
+ /note="flagellar basal body rod protein FlgB; Reviewed;
+ Region: flgB; PRK05680"
+ /db_xref="CDD:180196"
+ misc_feature complement(1754166..1754552)
+ /gene="flgB"
+ /locus_tag="SARI_01823"
+ /note="flagellar basal body rod protein FlgB; Reviewed;
+ Region: flgB; PRK07182"
+ /db_xref="CDD:75964"
+ gene 1754731..1755390
+ /gene="flgA"
+ /locus_tag="SARI_01824"
+ CDS 1754731..1755390
+ /gene="flgA"
+ /locus_tag="SARI_01824"
+ /inference="protein motif:HMMPfam:IPR013974"
+ /inference="similar to AA sequence:INSD:CAD08297.1"
+ /note="required for the assembly of the flagellar basal
+ body P-ring"
+ /codon_start=1
+ /transl_table=11
+ /product="flagellar basal body P-ring biosynthesis protein
+ FlgA"
+ /protein_id="YP_001570851.2"
+ /db_xref="GI:448236244"
+ /db_xref="InterPro:IPR013974"
+ /translation="MQTLKRGFAVAALLFSPLTMAQDINAQLTTWFSQRLAGFSDEVV
+ VTLRSPPTLLPGCEQPAFSMTGSAKLWGNVNVVARCANEKRYLQVNVQATGNYVAVAA
+ PVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAISLRDLAPGQPVQLTMIRQAW
+ RVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVRMTSGQIVSGTVDPDGNILIN
+ L"
+ misc_feature 1754731..1755387
+ /gene="flgA"
+ /locus_tag="SARI_01824"
+ /note="flagellar basal body P-ring biosynthesis protein
+ FlgA; Reviewed; Region: flgA; PRK07018"
+ /db_xref="CDD:180794"
+ misc_feature 1755016..1755198
+ /gene="flgA"
+ /locus_tag="SARI_01824"
+ /note="SAF domains of the flagella basal body P-ring
+ formation protein FlgA and the flp pilus assembly CpaB;
+ Region: SAF_CpaB_FlgA_like; cd11614"
+ /db_xref="CDD:212159"
+ misc_feature <1755118..1755375
+ /gene="flgA"
+ /locus_tag="SARI_01824"
+ /note="Domains similar to fish antifreeze type III
+ protein; Region: SAF; cl00555"
+ /db_xref="CDD:241945"
+ gene 1755482..1755775
+ /locus_tag="SARI_01825"
+ CDS 1755482..1755775
+ /locus_tag="SARI_01825"
+ /inference="protein motif:HMMPfam:IPR007412"
+ /inference="similar to AA sequence:INSD:"
+ /note="regulates the flagellar specific sigma28
+ transcription factor"
+ /codon_start=1
+ /transl_table=11
+ /product="anti-sigma28 factor FlgM"
+ /protein_id="YP_001570852.1"
+ /db_xref="GI:161503740"
+ /db_xref="InterPro:IPR007412"
+ /translation="MSIDRTSPLKPVSTVQTRETSDTSVQKTRQEKTSAATSASVTLS
+ DAQAKLMQPGASDINMERVEALKTAIRNGELKMDTGKIADSLIREAQSYLQSK"
+ misc_feature 1755482..1755772
+ /locus_tag="SARI_01825"
+ /note="anti-sigma28 factor FlgM; Provisional; Region:
+ PRK10810"
+ /db_xref="CDD:236765"
+ gene 1755780..1756202
+ /locus_tag="SARI_01826"
+ CDS 1755780..1756202
+ /locus_tag="SARI_01826"
+ /inference="protein motif:HMMPfam:IPR007809"
+ /inference="similar to AA sequence:INSD:AAL20101.1"
+ /note="'COG: COG3418 Flagellar biosynthesis/type III
+ secretory pathway chaperone;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570853.1"
+ /db_xref="GI:161503741"
+ /db_xref="InterPro:IPR007809"
+ /translation="MTRLSEILDQMTAVLNDLKTVMDAEQQQLSVGQINGSQLQRITE
+ EKSSLLATLDYLEQQRRLEQNAQRSANDNIAERWQEITEKTQHLRDLNQHNGWLLEGQ
+ IERNQQALEVLKPHQEPTLYGANGQTAVSHRGGKKISI"
+ misc_feature 1755780..1756199
+ /locus_tag="SARI_01826"
+ /note="flagella synthesis chaperone protein FlgN;
+ Provisional; Region: PRK15459"
+ /db_xref="CDD:185356"
+ gene complement(1756285..1757886)
+ /locus_tag="SARI_01827"
+ CDS complement(1756285..1757886)
+ /locus_tag="SARI_01827"
+ /inference="protein motif:HMMPfam:IPR004268"
+ /inference="protein motif:HMMTigr:IPR004268"
+ /inference="similar to AA sequence:INSD:AAL20100.1"
+ /note="'COG: COG0728 Uncharacterized membrane protein,
+ putative virulence factor;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570854.1"
+ /db_xref="GI:161503742"
+ /db_xref="InterPro:IPR004268"
+ /translation="MRYPVWGSAIQEFCARVWNTKEMNLLKSLAAVSSMTMFSRVLGF
+ ARDAIVARIFGAGMATDAFFVAFKLPNLLRRIFAEGAFSQAFVPILAEYKSKQGEEAT
+ RVFVAYVSGLLTLALAVVTVAGMLAAPWVIMVTAPGFADTADKFALTTQLLRITFPYI
+ LLISLASLVGAILNTWNRFSIPAFAPTFLNISMIGFALFAAPYFNPPVLALAWAVTVG
+ GVLQLVYQLPYLKKIGMLVLPRINFRDTGAMRVVKQMGPAILGVSVSQISLIINTIFA
+ SFLASGSVSWMYYADRLMEFPSGVLGVALGTILLPSLSKSFASGNHDEYCRLMDWGLR
+ LCFLLALPSAVALGVLAKPLTVSLFQYGKFTAFDAAMTQRALIAYSVGLIGLIVVKVL
+ APGFYSRQDIKTPVKIAIVTLIMTQLMNLAFIGPLKHAGLSLSIGLAACLNASLLYWQ
+ LRKQNIFTPQPGWMWFLARLIISVLVMAAVLFGVLHIMPEWSQGAMLWRLLRLMAVVI
+ AGIAAYFAALAVLGFKVKEFVRRTA"
+ misc_feature complement(1756375..1757835)
+ /locus_tag="SARI_01827"
+ /note="Uncharacterized membrane protein, putative
+ virulence factor [General function prediction only];
+ Region: MviN; COG0728"
+ /db_xref="CDD:223800"
+ misc_feature complement(1756525..1757790)
+ /locus_tag="SARI_01827"
+ /note="MurJ/MviN, a subfamily of the multidrug and toxic
+ compound extrusion (MATE)-like proteins; Region:
+ MATE_MurJ_like; cd13123"
+ /db_xref="CDD:240528"
+ gene complement(1758184..1759107)
+ /locus_tag="SARI_01828"
+ CDS complement(1758184..1759107)
+ /locus_tag="SARI_01828"
+ /inference="protein motif:HMMPfam:IPR000683"
+ /inference="protein motif:HMMPfam:IPR004104"
+ /inference="similar to AA sequence:REFSEQ:YP_150919.1"
+ /note="'KEGG: lpl:lp_0813 2.0e-30 oxidoreductase
+ (putative) K03810;
+ COG: COG0673 Predicted dehydrogenases and related
+ proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570855.1"
+ /db_xref="GI:161503743"
+ /db_xref="InterPro:IPR000683"
+ /db_xref="InterPro:IPR004104"
+ /translation="MRTLRIGIVGLGGIAQKAWLPVLTHTAGWTLQGAWSPSRDKALR
+ ICESWRIPYVDSLANLASGCDAVFVHSSTASHYAVVSELLNAGVHVCVDKPLAENLRD
+ AERLVALAAQKKLTLMVGFNRRFAPLYRELKTRLGAAASLRMDKHRTDSVGPHDLRFT
+ LLDDYLHVVDTALWLAGGEAYLASGTLLTGEVGEMRYAEHHFSADKLQITTSMHRRAG
+ SQRESVQAVTDGGLYDVTDMREWREERGQGILIKPIPGWQTTLEQRGFVGCARHFIDC
+ VQNQTVPETAGEQAILAQRVVEALWRDAMSE"
+ misc_feature complement(1758190..1759107)
+ /locus_tag="SARI_01828"
+ /note="Predicted dehydrogenases and related proteins
+ [General function prediction only]; Region: MviM; COG0673"
+ /db_xref="CDD:223745"
+ misc_feature complement(1758745..1759098)
+ /locus_tag="SARI_01828"
+ /note="Oxidoreductase family, NAD-binding Rossmann fold;
+ Region: GFO_IDH_MocA; pfam01408"
+ /db_xref="CDD:201778"
+ misc_feature complement(1758427..1758684)
+ /locus_tag="SARI_01828"
+ /note="Oxidoreductase family, C-terminal alpha/beta
+ domain; Region: GFO_IDH_MocA_C; pfam02894"
+ /db_xref="CDD:217272"
+ gene complement(1759109..1759810)
+ /locus_tag="SARI_01829"
+ CDS complement(1759109..1759810)
+ /locus_tag="SARI_01829"
+ /inference="protein motif:HMMPfam:IPR007432"
+ /inference="similar to AA sequence:REFSEQ:NP_455661.1"
+ /note="'COG: COG3132 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570856.1"
+ /db_xref="GI:161503744"
+ /db_xref="InterPro:IPR007432"
+ /translation="MDAGALSGLRSERQREKTMKYELTATEARVIGCLLEKQVTTPEQ
+ YPLSVHGVVTACNQKTNREPVMNLTEQAVQEQLDNLVKRHFLRTVSGFGNRVTKYEQR
+ FCNSEFGDLKLSAAEVALVTTLLLRGAQTPGELRSRASRMYEFSDMAEVESTLERLAS
+ REDGPYVIRLAREPGKRESRYMHLFCGDVDELSLQTSVPDSASGDLQSRVEALESEVA
+ ELKQRLDSLLAHLGE"
+ misc_feature complement(1759112..1759756)
+ /locus_tag="SARI_01829"
+ /note="hypothetical protein; Provisional; Region:
+ PRK11239"
+ /db_xref="CDD:183048"
+ misc_feature complement(1759118..1759756)
+ /locus_tag="SARI_01829"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG3132"
+ /db_xref="CDD:225674"
+ gene complement(1759792..1760376)
+ /locus_tag="SARI_01830"
+ CDS complement(1759792..1760376)
+ /locus_tag="SARI_01830"
+ /inference="protein motif:HMMPfam:IPR000182"
+ /inference="similar to AA sequence:REFSEQ:YP_216102.1"
+ /note="'KEGG: sec:SC1115 7.2e-106 rimJ; acetylation of
+ N-terminal alanine of 30S ribosomal subunit protein S5
+ K03790;
+ COG: COG1670 Acetyltransferases, including N-acetylases of
+ ribosomal proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="ribosomal-protein-S5-alanine
+ N-acetyltransferase"
+ /protein_id="YP_001570857.1"
+ /db_xref="GI:161503745"
+ /db_xref="InterPro:IPR000182"
+ /translation="MFGYRSNVPKVRLTTDRLVVRLVHERDAWRLADYYAENRHFLKP
+ WEPVRDESHCYPSGWQARLGMIGEFHKQGSAFYFALLDPEEKEIIGVANFSNVVRGSF
+ HACYLGYSIAQKWQGQGMMFEALTAAIRYMQRTQHIHRIMANYMPHNKRSGALLARLG
+ FEKEGYAKDYLLIDGQWRDHVLTALTTPSWTPGR"
+ misc_feature complement(1759795..1760376)
+ /locus_tag="SARI_01830"
+ /note="ribosomal-protein-S5-alanine N-acetyltransferase;
+ Provisional; Region: PRK10809"
+ /db_xref="CDD:182749"
+ misc_feature complement(1759795..1760343)
+ /locus_tag="SARI_01830"
+ /note="Acetyltransferases, including N-acetylases of
+ ribosomal proteins [Translation, ribosomal structure and
+ biogenesis]; Region: RimL; COG1670"
+ /db_xref="CDD:224584"
+ gene 1760613..1761827
+ /locus_tag="SARI_01831"
+ CDS 1760613..1761827
+ /locus_tag="SARI_01831"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="similar to AA sequence:REFSEQ:YP_150922.1"
+ /note="Confers resistance to norfloxacin and enoxacin"
+ /codon_start=1
+ /transl_table=11
+ /product="multidrug resistance protein MdtH"
+ /protein_id="YP_001570858.1"
+ /db_xref="GI:161503746"
+ /db_xref="InterPro:IPR011701"
+ /translation="MSRVSQARNLGKYFLLIDNMLVVLGFFVVFPLISIRFVDQMGWA
+ AVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMGIAHEPWLL
+ WFSCFLSGLGGTLFDPPRSALVVKLIRPEQRGRFFSLLMMQDSAGAVIGALLGSWLLQ
+ YDFRLVCAMGAILFIVCAIFNAWLLPAWKLSTVRTPVREGMRRVISDKRFVTYVLTLA
+ GYYMLAVQVMLMLPIMVNDVAGSPAAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHR
+ LMAGLLIMSLSMIPIGLAGNLQQLFTLICAFYIGSVIAEPARETLSASLTDARARGSY
+ MGFSRLGLAIGGAIGYIGGGWLFDMGKTLAQPELPWMMLGIIGFITFLALGWQFSHKR
+ TPRQYTGARRLI"
+ misc_feature 1760613..1761797
+ /locus_tag="SARI_01831"
+ /note="multidrug resistance protein MdtH; Provisional;
+ Region: PRK11646"
+ /db_xref="CDD:183255"
+ misc_feature 1760721..1761770
+ /locus_tag="SARI_01831"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature order(1760766..1760768,1760775..1760780,1760787..1760789,
+ 1760799..1760804,1760808..1760813,1760949..1760954,
+ 1760961..1760966,1760973..1760978,1760985..1760987,
+ 1761021..1761026,1761033..1761038,1761054..1761056,
+ 1761273..1761275,1761282..1761287,1761294..1761299,
+ 1761306..1761308,1761345..1761347,1761357..1761359,
+ 1761369..1761371,1761378..1761380,1761390..1761392,
+ 1761534..1761536,1761543..1761548,1761555..1761557,
+ 1761567..1761572,1761579..1761581,1761612..1761617,
+ 1761624..1761629,1761636..1761641,1761648..1761650)
+ /locus_tag="SARI_01831"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene 1761934..1762533
+ /locus_tag="SARI_01832"
+ CDS 1761934..1762533
+ /locus_tag="SARI_01832"
+ /inference="protein motif:Gene3D:IPR012335"
+ /inference="protein motif:HMMPfam:IPR007494"
+ /inference="protein motif:HMMTigr:IPR011901"
+ /inference="protein motif:superfamily:IPR010987"
+ /inference="protein motif:superfamily:IPR012336"
+ /inference="similar to AA sequence:INSD:CAD08289.1"
+ /note="cofactor involved in the reduction of disulfides"
+ /codon_start=1
+ /transl_table=11
+ /product="glutaredoxin 2"
+ /protein_id="YP_001570859.1"
+ /db_xref="GI:161503747"
+ /db_xref="InterPro:IPR007494"
+ /db_xref="InterPro:IPR010987"
+ /db_xref="InterPro:IPR011901"
+ /db_xref="InterPro:IPR012335"
+ /db_xref="InterPro:IPR012336"
+ /translation="MIFGLKNIPVELNVLQNDDEATPTRMIGQKMVPILQKDDSRYLP
+ ESMDIVHYVDNSDGTPLLTGKRSPAIEEWLRKVNGYVNQLLLPRFAKSAFDEFSTPAA
+ RQYFIRKKEASSGSFDNHLAHSAGLIKKIGDDLRSLDKLIVQPNAVNGELSEDDIHLF
+ PLLRNLTLVAGIHWPTKVADYRDNMAKQTQINLLSSMAI"
+ misc_feature 1761934..1762515
+ /locus_tag="SARI_01832"
+ /note="glutaredoxin 2; Provisional; Region: PRK10387"
+ /db_xref="CDD:236679"
+ misc_feature <1761934..1762095
+ /locus_tag="SARI_01832"
+ /note="Protein Disulfide Oxidoreductases and Other
+ Proteins with a Thioredoxin fold; Region:
+ Thioredoxin_like; cl00388"
+ /db_xref="CDD:241832"
+ misc_feature 1762132..1762515
+ /locus_tag="SARI_01832"
+ /note="C-terminal, alpha helical domain of Glutaredoxin 2;
+ Region: GST_C_GRX2; cd03199"
+ /db_xref="CDD:198308"
+ misc_feature order(1762198..1762200,1762213..1762230,1762234..1762239,
+ 1762246..1762251,1762258..1762260,1762387..1762389,
+ 1762393..1762395,1762399..1762407,1762411..1762416,
+ 1762423..1762428,1762486..1762488,1762495..1762500,
+ 1762504..1762506)
+ /locus_tag="SARI_01832"
+ /note="N-terminal domain interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:198308"
+ gene 1762643..1763218
+ /locus_tag="SARI_01833"
+ CDS 1762643..1763218
+ /locus_tag="SARI_01833"
+ /inference="protein motif:HMMPfam:IPR010835"
+ /inference="similar to AA sequence:INSD:AAL20094.1"
+ /note="'COG: NOG07875 non supervised orthologous group;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570860.1"
+ /db_xref="GI:161503748"
+ /db_xref="InterPro:IPR010835"
+ /translation="MLRNAMKKFFFAAALVVSGLLVGCNQLTQYTISEQEINQALEKR
+ NNFSKDIGLPGIADAHIVLTNLASQIGREEPNKVTLTGDARLDMNSLFGSQKATMKLK
+ LKALPVFNKEKGAIYLQEMEVVDATVTPEKMQSVLQTLLPYLNQSLRNYFNQQPAYVL
+ REDSSKGEALAKRFAKGIEVKPGEIVIPFTN"
+ misc_feature 1762658..1763215
+ /locus_tag="SARI_01833"
+ /note="lipoprotein; Provisional; Region: PRK10598"
+ /db_xref="CDD:182579"
+ gene 1763319..1764365
+ /locus_tag="SARI_01834"
+ CDS 1763319..1764365
+ /locus_tag="SARI_01834"
+ /inference="protein motif:HMMPfam:IPR006680"
+ /inference="protein motif:HMMTigr:IPR004721"
+ /inference="protein motif:ScanRegExp:IPR002195"
+ /inference="similar to AA sequence:REFSEQ:YP_216098.1"
+ /note="catalyzes the formation of N-carbamoyl-L-aspartate
+ from (S)-dihydroorotate in pyrimidine biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="dihydroorotase"
+ /protein_id="YP_001570861.1"
+ /db_xref="GI:161503749"
+ /db_xref="InterPro:IPR002195"
+ /db_xref="InterPro:IPR004721"
+ /db_xref="InterPro:IPR006680"
+ /translation="MTAPSQVLKIHRPDDWHVHLRDGDMLKTVVPYTSEIYGRAIVMP
+ NLASPITTVDAAIAYRQRILDAVPAGHDFTPLMTCYLTDSLDADELERGFHEGVFTAA
+ KLYPANATTNSSHGVTSIDAIMPVLERMEKLGMPLLVHGEVTHADVDIFDREARFIDT
+ VMEPLRQRLTALKVVFEHITTKDAAQYVRDGNDYLAATITPQHLMFNRNHMLVGGIRP
+ HLYCLPILKRNIHQQALRELVASGFTRAFLGTDSAPHSRHRKETSCGCAGCFNAPSAL
+ GSYAVVFEEMNALAHFEAFCSLNGPQFYGLPVNKGWVELVRDEQQIPENIALADDSLV
+ PFLAGETVRWSVKK"
+ misc_feature 1763340..1764350
+ /locus_tag="SARI_01834"
+ /note="Dihydroorotase (DHOase) catalyzes the reversible
+ interconversion of carbamoyl aspartate to dihydroorotate,
+ a key reaction in the pyrimidine biosynthesis. In contrast
+ to the large polyfunctional CAD proteins of higher
+ organisms, this group of DHOases is...; Region: DHOase;
+ cd01294"
+ /db_xref="CDD:238619"
+ misc_feature order(1763367..1763369,1763373..1763375,1763625..1763627,
+ 1763736..1763738,1763850..1763852,1764069..1764071)
+ /locus_tag="SARI_01834"
+ /note="active site"
+ /db_xref="CDD:238619"
+ misc_feature order(1763379..1763381,1763982..1763987,1764075..1764077,
+ 1764081..1764083,1764117..1764122)
+ /locus_tag="SARI_01834"
+ /note="substrate binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:238619"
+ misc_feature order(1763766..1763777,1763940..1763945,1763979..1763981,
+ 1764000..1764002,1764105..1764113)
+ /locus_tag="SARI_01834"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238619"
+ gene 1764439..1764684
+ /locus_tag="SARI_01835"
+ CDS 1764439..1764684
+ /locus_tag="SARI_01835"
+ /inference="protein motif:HMMPfam:IPR010391"
+ /inference="similar to AA sequence:INSD:AAV77613.1"
+ /note="'COG: NOG13873 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA damage-inducible protein I"
+ /protein_id="YP_001570862.1"
+ /db_xref="GI:161503750"
+ /db_xref="InterPro:IPR010391"
+ /translation="MRIEVTIAKTSPLPAGAIDALAGELSRRISHHFPENLDNVTVRY
+ AAANNLSVIGASKEDKERVSEILQETWESADDWFINE"
+ misc_feature 1764439..1764681
+ /locus_tag="SARI_01835"
+ /note="DNA damage-inducible protein I; Provisional;
+ Region: PRK10597"
+ /db_xref="CDD:182578"
+ gene 1764971..1765228
+ /gene="bssS"
+ /locus_tag="SARI_01836"
+ CDS 1764971..1765228
+ /gene="bssS"
+ /locus_tag="SARI_01836"
+ /inference="similar to AA sequence:REFSEQ:NP_460132.2"
+ /note="'BssS; regulator of biofilm through signal
+ secretion; disruption of this gene in Escherichia coli led
+ to effects on biofilm formation, alteration in expression
+ of a number of genes and mutations in bssS led to defects
+ in indole transport and autoinducer-2 uptake and
+ processing'"
+ /codon_start=1
+ /transl_table=11
+ /product="biofilm formation regulatory protein BssS"
+ /protein_id="YP_001570863.1"
+ /db_xref="GI:161503751"
+ /translation="MMEKNNEVIQPHPLVGWDISTVDSYDALMLRLHYQTPNRPEPEG
+ TEVGQTLWLTTDVARQFISILEAGIAKIESGDYQENEYRRH"
+ misc_feature 1764974..1765225
+ /gene="bssS"
+ /locus_tag="SARI_01836"
+ /note="biofilm formation regulatory protein BssS;
+ Reviewed; Region: bssS; PRK12301"
+ /db_xref="CDD:183419"
+ gene 1765340..1766458
+ /gene="solA"
+ /locus_tag="SARI_01837"
+ CDS 1765340..1766458
+ /gene="solA"
+ /locus_tag="SARI_01837"
+ /inference="protein motif:HMMPfam:IPR006076"
+ /inference="similar to AA sequence:INSD:AAL20090.1"
+ /note="catalyzes the demethylation of
+ N-methyl-L-tryptophan forming L-tryptophan and
+ formaldehyde; FAD-binding; can also catalyze the
+ demethylation of other N-methyl amino acids"
+ /codon_start=1
+ /transl_table=11
+ /product="N-methyltryptophan oxidase"
+ /protein_id="YP_001570864.1"
+ /db_xref="GI:161503752"
+ /db_xref="InterPro:IPR006076"
+ /translation="MKYDLIIIGSGSVGAAAGYYATRAGLKVLMTDAHMPPHQQGSHH
+ GDTRLIRHAYGEGEKYVPLVLRAQALWDELSAHNEEPIFVRSGVVNLGPADSAFLANV
+ ARSAQQRQLNVERLDATALMTRWPEIRVPDNYIGLFEADSGFLRSELAITTWLRLARE
+ AGCAQLFNCPVTRIHHDDNGVTIETGEGRYHASRALLSAGTWVKALAPELPVQPIRKV
+ FAWFQADGRYSVKNRFPAFTGEMPNGDQYYGFPAENNELKIGKHNGGQLIQSQEERKP
+ FAAVASDGAEAFPFLRNVLPGIGGCLHGAACTYDNSPDEDFIIDTLPGHENTLVITGL
+ SGHGFKFAPVLGEIAADFALEKTPSFDLTPFRLSRFSQ"
+ misc_feature 1765340..1766455
+ /gene="solA"
+ /locus_tag="SARI_01837"
+ /note="N-methyltryptophan oxidase; Provisional; Region:
+ solA; PRK11259"
+ /db_xref="CDD:236887"
+ misc_feature <1765634..>1765939
+ /gene="solA"
+ /locus_tag="SARI_01837"
+ /note="hydroxyglutarate oxidase; Provisional; Region:
+ PRK11728"
+ /db_xref="CDD:183292"
+ unsure 1766088..1766134
+ /gene="solA"
+ /locus_tag="SARI_01837"
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(1766487..1766657)
+ /locus_tag="SARI_01838"
+ CDS complement(1766487..1766657)
+ /locus_tag="SARI_01838"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570865.1"
+ /db_xref="GI:161503753"
+ /translation="MRKFQEMSVNVNAKRLEEKEINDIHNRQDRLKNNVKHEMFANII
+ NQKKKETTHSLP"
+ gene complement(1766629..1766817)
+ /locus_tag="SARI_01839"
+ CDS complement(1766629..1766817)
+ /locus_tag="SARI_01839"
+ /inference="similar to AA sequence:REFSEQ:YP_216093.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570866.1"
+ /db_xref="GI:161503754"
+ /translation="MQLINKNLNDIYFYFNNFDVVCDSASEVSKCFDPITALRGDCYH
+ FYALLYEIKSEEVSGNVS"
+ gene 1766873..1767445
+ /locus_tag="SARI_01840"
+ CDS 1766873..1767445
+ /locus_tag="SARI_01840"
+ /inference="protein motif:HMMPfam:IPR011577"
+ /inference="similar to AA sequence:INSD:AAL20088.1"
+ /note="'KEGG: reh:H16_A3123 1.0e-26 cytochrome b561
+ K00156;
+ COG: COG3038 Cytochrome B561;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570867.1"
+ /db_xref="GI:161503755"
+ /db_xref="InterPro:IPR011577"
+ /translation="MQFKNTPQRYGMVSAALHWLTALVVYGMFALGLWMVTLSYYDGW
+ YHQAPELHKSIGILLMMALILRIIWRLYSPPPVALTSYSRLTRAAAAAGHFLLYLLLF
+ AIVISGYLISTADGKPISVFGWFEVPATLADAGTQADVAGTLHRWFAWSLVIISLSHG
+ VMALKHHFIDKDDTLKRMTGTSSSDYGAQK"
+ misc_feature 1766879..1767421
+ /locus_tag="SARI_01840"
+ /note="Cytochrome B561 [Energy production and conversion];
+ Region: CybB; COG3038"
+ /db_xref="CDD:225580"
+ gene 1767442..1768017
+ /locus_tag="SARI_01841"
+ CDS 1767442..1768017
+ /locus_tag="SARI_01841"
+ /inference="protein motif:HMMPfam:IPR007372"
+ /inference="similar to AA sequence:INSD:AAV77618.1"
+ /note="'COG: COG2353 Uncharacterized conserved protein;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570868.1"
+ /db_xref="GI:161503756"
+ /db_xref="InterPro:IPR007372"
+ /translation="MKKNLLGFTLASLLFTTGSAVAAEYKIDKEGQHAFVNFRIQHLG
+ YSWLYGTFKDFDGTFTFDEKNPSADKVNVTINTNSVDTNHAERDKHLRSAEFLNVAKF
+ PQATFTSTSVKKEGDELDITGNLTLNGVTKPVTLEAKLMGQGDDPWGGKRAGFEAEGK
+ IKLKDFNITTDLGPASQEVELIISVEGVQQK"
+ misc_feature 1767442..1768011
+ /locus_tag="SARI_01841"
+ /note="hypothetical protein; Provisional; Region:
+ PRK03757"
+ /db_xref="CDD:179642"
+ gene complement(1768070..1769122)
+ /locus_tag="SARI_01842"
+ CDS complement(1768070..1769122)
+ /locus_tag="SARI_01842"
+ /inference="protein motif:HMMPfam:IPR001763"
+ /inference="protein motif:HMMSmart:IPR001763"
+ /inference="similar to AA sequence:REFSEQ:YP_150931.1"
+ /note="'KEGG: pub:SAR11_1074 3.2e-23 yceA; rhodanese
+ domain protein;
+ COG: COG1054 Predicted sulfurtransferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570869.1"
+ /db_xref="GI:161503757"
+ /db_xref="InterPro:IPR001763"
+ /translation="MPVLHNRISNDELKARMLAESEPRTTISFYKYFTIVSPQQTRDA
+ LYQMFTALGIFGRVYLAHEGINAQISVPQSKVETFRQQLYAFDPALDGLRLNIALEDD
+ GKSFWVLRMKVRDRIVADGIDDPSFDASNVGAYLKAAEVNAMLDDPDAIFIDMRNHYE
+ YEVGHFENALEIPADTFREQLPKAVEMLREHADKKIVMYCTGGIRCEKASAWMKHNGF
+ NKVWHIEGGIIEYARRAREQGLPVRFIGKNFVFDERMGERISDEVIAHCHQCGALCDS
+ HTNCKNAGCHLLFIQCPLCASKFNGCCSEQCCEELALPEDEQRRRRAGREKGNKIFNK
+ SRGRLNSKLGIPDPTE"
+ misc_feature complement(1768112..1769062)
+ /locus_tag="SARI_01842"
+ /note="putative rhodanese-related sulfurtransferase;
+ Provisional; Region: PRK00142"
+ /db_xref="CDD:234663"
+ misc_feature complement(1768424..1768726)
+ /locus_tag="SARI_01842"
+ /note="Member of the Rhodanese Homology Domain
+ superfamily. This CD includes Escherichia coli YceA,
+ Bacillus subtilis YbfQ, and similar uncharacterized
+ proteins; Region: RHOD_YceA; cd01518"
+ /db_xref="CDD:238776"
+ misc_feature complement(1768523..1768525)
+ /locus_tag="SARI_01842"
+ /note="active site residue [active]"
+ /db_xref="CDD:238776"
+ gene 1769344..1770264
+ /locus_tag="SARI_01843"
+ CDS 1769344..1770264
+ /locus_tag="SARI_01843"
+ /inference="protein motif:HMMPfam:IPR004960"
+ /inference="protein motif:HMMTigr:IPR011920"
+ /inference="similar to AA sequence:REFSEQ:NP_460126.1"
+ /note="Acylates the intermediate (KDO)2-lipid IVA to form
+ (KDO)2-(lauroyl)-lipid IVA"
+ /codon_start=1
+ /transl_table=11
+ /product="lipid A biosynthesis lauroyl acyltransferase"
+ /protein_id="YP_001570870.1"
+ /db_xref="GI:161503758"
+ /db_xref="InterPro:IPR004960"
+ /db_xref="InterPro:IPR011920"
+ /translation="MTNLPKFSLALLHPRYWLTWLGIGALWLVVQLPYPVIYKLGCTL
+ GHLARRVMKRRAKIAYRNLELCFPEMSAQERHTMVVKNFESVGMGVMETGMAWFWPDR
+ RVTRWMEASGLEYIREVKAQGLGFILVGIHFLTLEFGARMFGMHNPGIGVYRPNDNPL
+ LDWLQTWGRLRSNKSMLDRKDLKGMVKALKSGELIWYAPDHDYGPRASVFVPLFAVDQ
+ AATTSGTWMLARMSKACIIPFVPRRKPDGKGYELIILPAEYSPPLESAEATAAWMNKI
+ VEQCIMMAPEQYMWLHRRFKTRPEGVPSRY"
+ misc_feature 1769353..1770234
+ /locus_tag="SARI_01843"
+ /note="Bacterial lipid A biosynthesis acyltransferase;
+ Region: Lip_A_acyltrans; pfam03279"
+ /db_xref="CDD:112109"
+ misc_feature 1769659..1770231
+ /locus_tag="SARI_01843"
+ /note="Lysophospholipid Acyltransferases (LPLATs) of
+ Glycerophospholipid Biosynthesis: LABLAT-like; Region:
+ LPLAT_LABLAT-like; cd07984"
+ /db_xref="CDD:153246"
+ misc_feature order(1769737..1769739,1769746..1769748,1769752..1769754,
+ 1769800..1769811,1769944..1769952)
+ /locus_tag="SARI_01843"
+ /note="putative acyl-acceptor binding pocket; other site"
+ /db_xref="CDD:153246"
+ gene 1770412..1771626
+ /locus_tag="SARI_01844"
+ CDS 1770412..1771626
+ /locus_tag="SARI_01844"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="similar to AA sequence:INSD:AAO69389.1"
+ /note="Confers resistance to fosfomycin and deoxycholate"
+ /codon_start=1
+ /transl_table=11
+ /product="drug efflux system protein MdtG"
+ /protein_id="YP_001570871.1"
+ /db_xref="GI:161503759"
+ /db_xref="InterPro:IPR011701"
+ /translation="MSPSDVPINWKRNLTVTWLGCFLTGAAFSLVMPFLPLYVEQLGV
+ TGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMAIVMLLMGMA
+ QNIWQFLILRALLGLLGGFIPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAG
+ GLLADHYGLRPVFFITASVLFICFLLTFFFIRENFQPVSKKEMLHVREVVASLKNPRL
+ VLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRL
+ GKLGDRIGPEKILIVALIISVLLLIPMSFVQTPWQLALLRFLLGAADGALLPAVQTLL
+ VYNSTNQIAGRIFSYNQSFRDIGNVTGPLMGAAISASYGFRAVFCVTAGVVLFNAIYS
+ WNSLQRRRLATE"
+ misc_feature 1770412..1771617
+ /locus_tag="SARI_01844"
+ /note="drug efflux system protein MdtG; Provisional;
+ Region: PRK09874"
+ /db_xref="CDD:182127"
+ misc_feature 1770451..1771590
+ /locus_tag="SARI_01844"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature order(1770493..1770495,1770502..1770510,1770514..1770519,
+ 1770583..1770585,1770592..1770597,1770604..1770606,
+ 1770616..1770621,1770625..1770630,1770766..1770771,
+ 1770778..1770780,1770787..1770792,1770799..1770801,
+ 1770835..1770840,1770847..1770852,1770868..1770870,
+ 1771099..1771101,1771108..1771113,1771120..1771125,
+ 1771132..1771134,1771183..1771185,1771195..1771197,
+ 1771207..1771209,1771216..1771218,1771228..1771230,
+ 1771369..1771371,1771378..1771383,1771390..1771392,
+ 1771402..1771407,1771414..1771416,1771447..1771452,
+ 1771459..1771464,1771471..1771476,1771483..1771485)
+ /locus_tag="SARI_01844"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene 1771708..1772082
+ /locus_tag="SARI_01845"
+ CDS 1771708..1772082
+ /locus_tag="SARI_01845"
+ /inference="similar to AA sequence:INSD:AAL20083.1"
+ /note="'COG: NOG09842 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570872.1"
+ /db_xref="GI:161503760"
+ /translation="MTMYATLEEAIDAAREEFLADNPGLEQDEANVQQFNVQKYVLQD
+ GDIMWQVEFFADEGEDGECLPMLSGEAAQSVFDGDYDEIEIRQEWQEENTLHEWDEGE
+ FQLEPPLDTEEGRTAADEWDER"
+ misc_feature 1771708..1772079
+ /locus_tag="SARI_01845"
+ /note="secY/secA suppressor protein; Provisional; Region:
+ PRK11467"
+ /db_xref="CDD:183149"
+ gene complement(1772083..1772322)
+ /locus_tag="SARI_01846"
+ CDS complement(1772083..1772322)
+ /locus_tag="SARI_01846"
+ /inference="protein motif:HMMPfam:IPR010780"
+ /inference="similar to AA sequence:REFSEQ:YP_216086.1"
+ /note="'COG: COG5645 Predicted periplasmic lipoprotein;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570873.1"
+ /db_xref="GI:161503761"
+ /db_xref="InterPro:IPR010780"
+ /translation="MRYLMRIFMVSIMVITLSGCGSIISRTVPGQGHGNQYYPGVQWD
+ MRDSAWRYITILDLPFSLLFDTLLLPLDIQHGPYK"
+ misc_feature complement(1772086..1772310)
+ /locus_tag="SARI_01846"
+ /note="lipoprotein; Provisional; Region: PRK10175"
+ /db_xref="CDD:182286"
+ gene complement(1772408..1774951)
+ /locus_tag="SARI_01847"
+ CDS complement(1772408..1774951)
+ /locus_tag="SARI_01847"
+ /inference="protein motif:HMMPfam:IPR001173"
+ /inference="protein motif:ScanRegExp:IPR002345"
+ /note="necessary for biosynthesis of osmoregulated
+ periplasmic glucans possibly involved in the transfer to
+ the periplasmic space"
+ /codon_start=1
+ /transl_table=11
+ /product="glucosyltransferase MdoH"
+ /protein_id="YP_001570874.1"
+ /db_xref="GI:161503762"
+ /db_xref="InterPro:IPR001173"
+ /db_xref="InterPro:IPR002345"
+ /translation="MNKTTEYIDALLLSEREKAALPKTDIRAVHQALDAEHRTYSRED
+ DSPLGSVKARLEHAWPDSLAQGQLIKDGEGRDHLQAMPKATRSSMFPDPWRTNPIGRF
+ WDRLRGRDVTPRYVSRLTKEEQANEQKWRTVGTIRRYILLILTLAQTVIATWYMKTIL
+ PYQGWALINPMDMVGQDIWVSFMQLLPYVLQTGILILFAVLFCWVSAGFWTALMGFLQ
+ LLIGRDKYSISASTVGDEPLNPEHRTALIMPICNEDVSRVFAGLRATWESVKATGNAA
+ HFDVYILSDSYNPDICVAEQKAWMELIAEVQGEGQIFYRRRRRRMKRKSGNIDDFCRR
+ WGNQYSYMVVLDADSVMSGECLSGLVRLMEANPNAGIIQSSPKASGMDTLYARCQQFA
+ TRVYGPLFTAGLHFWQLGESHYWGHNAIIRVKPFIEHCALAPLPGEGSFAGSILSHDF
+ VEAALMRRAGWGVWIAYDLPGSYEELPPNLLDELKRDRRWCHGNLMNFRLFLVKGMHP
+ VHRAVFLTGVMSYLSAPLWFMFLALSTALQIVHALTEPQYFLQPRQLFPVWPQWRPEL
+ AIALFASTMVLLFLPKLLSIMLIWCKGTKEYGGFWRVTLSLLLEVLFSVLLAPVRMLF
+ HTVFVVSAFLGWEVVWNSPQRDDDSTPWGEAFMRHGSQLLLGLVWAVGMAWLDLRFLF
+ WLAPIVFSLILSPFVSVISSRSTVGLRTKRWKLFLIPEEYSPPQVLVDTDKYLEMNRR
+ RILDDGFMHAVFNPSLNSLATAMATARHRASKVLEIARDRHVEQALNETPEKLNRDRR
+ LVLLSDPVTMARLHYRVWNAPERYSSWVNHYQSLVLNPQALQGRTSSAG"
+ misc_feature complement(1773473..1774228)
+ /locus_tag="SARI_01847"
+ /note="Glycosyltransferase like family 2; Region:
+ Glyco_tranf_2_3; pfam13641"
+ /db_xref="CDD:222281"
+ misc_feature complement(1773461..1774222)
+ /locus_tag="SARI_01847"
+ /note="Glucan_BSP_ModH catalyzes the elongation of
+ beta-1,2 polyglucose chains of glucan; Region:
+ Glucan_BSP_ModH; cd04191"
+ /db_xref="CDD:133034"
+ misc_feature complement(order(1773908..1773910,1774199..1774201,
+ 1774205..1774207))
+ /locus_tag="SARI_01847"
+ /note="Ligand binding site; other site"
+ /db_xref="CDD:133034"
+ misc_feature complement(1773908..1773916)
+ /locus_tag="SARI_01847"
+ /note="DXD motif; other site"
+ /db_xref="CDD:133034"
+ gene complement(1774944..1776545)
+ /gene="mdoG"
+ /locus_tag="SARI_01848"
+ CDS complement(1774944..1776545)
+ /gene="mdoG"
+ /locus_tag="SARI_01848"
+ /inference="protein motif:HMMPfam:IPR007444"
+ /inference="similar to AA sequence:INSD:AAL20080.1"
+ /note="involved in the biosynthesis of osmoregulated
+ periplasmic glucans; required for the assembly of the
+ polyglucose structure of glucan"
+ /codon_start=1
+ /transl_table=11
+ /product="glucan biosynthesis protein G"
+ /protein_id="YP_001570875.1"
+ /db_xref="GI:161503763"
+ /db_xref="InterPro:IPR007444"
+ /translation="MDRIDISTQRGKCLLIMKHKRQMMKMRWLGAAVMLTLYASSSWA
+ FSIDDVAKKAQSLAGKGYEAPKSNLPSVFRDMKYADYQQIQFNSDKAYWNNLKTPFKL
+ EFYHQGMYFDTPVKINEVTATTVKRIKYSPDYFNFGNVQHDKDTVKDLGFAGFKILYP
+ INSKDKNDEIVSMLGASYFRVIGAGQVYGLSARGLAIDTALPSGEEFPRFREFWIERP
+ KPTDKRLTVYALLDSPRATGAYRFVIIPGRDTVVDVQSKVYLRDKVGKLGVAPLTSMF
+ LFGPNQPSPTTNYRPELHDSNGLSIHAGNGEWIWRPLNNPKHLAVSSYAMENPQGFGL
+ LQRGREFSRFEDLDDRYDLRPSAWITPKGDWGKGKVELVEIPTNDETNDNIVAYWTPD
+ QLPEPGKEMNFKYTLTFSRDEDKLHAPDNAWVLQTRRSTGDVKQSNLIRQPDGTIAFV
+ VDFVGTDMKKLPPDTPVAAQTSIGDNGEIVDSNVRYNPVTKGWRLMLRVKVKDAKKTT
+ EMRAALVNADQTLSETWSYQLPANE"
+ misc_feature complement(1774950..1776497)
+ /gene="mdoG"
+ /locus_tag="SARI_01848"
+ /note="glucan biosynthesis protein G; Provisional; Region:
+ mdoG; PRK13274"
+ /db_xref="CDD:237328"
+ misc_feature complement(1774953..1776413)
+ /gene="mdoG"
+ /locus_tag="SARI_01848"
+ /note="Periplasmic glucan biosynthesis protein, MdoG;
+ Region: MdoG; pfam04349"
+ /db_xref="CDD:113132"
+ gene 1776751..1777905
+ /gene="mdoC"
+ /locus_tag="SARI_01849"
+ CDS 1776751..1777905
+ /gene="mdoC"
+ /locus_tag="SARI_01849"
+ /inference="protein motif:HMMPfam:IPR002656"
+ /inference="similar to AA sequence:REFSEQ:YP_150938.1"
+ /note="required for the transfer of succinyl residues to
+ the glucan backbone"
+ /codon_start=1
+ /transl_table=11
+ /product="glucans biosynthesis protein"
+ /protein_id="YP_001570876.1"
+ /db_xref="GI:161503764"
+ /db_xref="InterPro:IPR002656"
+ /translation="MSSVPAPREYFLDSIRAWLMLLGIPFHISLIYSTHSWHVNSAAP
+ SWWLTLFNDFIHAFRMQVFFVISGYFSYMLFLRYPLKRWWRVRVERVGIPMLTAIPLL
+ TLPQFIMLQFVKGKTENWHMLSAYEKYNTLAWELISHLWFLLVLVILTTVSIGIFTWF
+ QKRQKTSKPRPAAISLATLSLIFFLLGMAYAAIRRIIFIVYPAILSDGMFNFVVMQTL
+ FYVPFFILGALAFIHPELKARFTTPSRGCALGAAAAFIAYLLNQRYGSGDAWMYETES
+ VITMVMGLWMVNVVFSLGHRLLNFQSARVTYFVNASLFIYLVHHPLTLFFGAYITPLI
+ SSNLIGFLCGLIFVIGIALILYEIHLRIPLLKFLFSGKPPVKRENRAAIG"
+ misc_feature 1776751..1777872
+ /gene="mdoC"
+ /locus_tag="SARI_01849"
+ /note="glucans biosynthesis protein; Provisional; Region:
+ opgC; PRK03854"
+ /db_xref="CDD:235167"
+ misc_feature 1776778..1777821
+ /gene="mdoC"
+ /locus_tag="SARI_01849"
+ /note="Acyltransferase family; Region: Acyl_transf_3;
+ pfam01757"
+ /db_xref="CDD:216682"
+ gene complement(1777922..1779409)
+ /locus_tag="SARI_01850"
+ CDS complement(1777922..1779409)
+ /locus_tag="SARI_01850"
+ /inference="protein motif:HMMPfam:IPR001736"
+ /inference="protein motif:HMMSmart:IPR001736"
+ /inference="similar to AA sequence:REFSEQ:NP_455642.1"
+ /note="'KEGG: reh:H16_B1107 3.5e-106 phospholipase D
+ K01115;
+ COG: COG1502
+ Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi
+ n synthases and related enzymes;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="phospholipase"
+ /protein_id="YP_001570877.2"
+ /db_xref="GI:448236245"
+ /db_xref="InterPro:IPR001736"
+ /translation="MMKKLPGFTHDYLLSKATTQPDKTRLQRAVEPLCARHPGECGIL
+ ALDNSLDAFAARYRLTEMAERTLDVQYYIWEDDMSGRLLFAVLLSAAKRGVHVRLLLD
+ DNNTPGLDDTLRLLDSHPNIEVRLFNPFSFRTLRALGYLTDFARLNRRMHNKSYTADG
+ VVTLVGGRNIGDAYFGAGEEPLFSDLDVMAIGPVVNDVANDFERYWRCSSVSTLQQVL
+ SLSEQELTQRIELPDSWYNDEITRRYLHKLETSQFMADLDRGALPLIWAKTRLLSDDP
+ SKGEGKAQRHSLLPQRLFDVMGSPRERIDIISAYFVPTRAGVAQLLNLVRKGVKIAIL
+ TNSLAANDVAVVHAGYARWRKKLLRYGVELYELKPTREHETVVHDRGLTGNSGSSLHA
+ KTFSIDGSKVFIGSLNLDPRSTLLNTEMGFVIESETLATLIHKRFTQSQRDAAWQLRL
+ DRWGRINWIDRQQEEERVLKKEPATRFWQRVLVRLAAVLPVEWLL"
+ misc_feature complement(1778792..1779274)
+ /locus_tag="SARI_01850"
+ /note="Putative catalytic domain, repeat 1, of Escherichia
+ coli uncharacterized protein ymdC and similar proteins;
+ Region: PLDc_ymdC_like_1; cd09111"
+ /db_xref="CDD:197210"
+ misc_feature complement(1778792..1779217)
+ /locus_tag="SARI_01850"
+ /note="PLD-like domain; Region: PLDc_2; pfam13091"
+ /db_xref="CDD:221916"
+ misc_feature complement(order(1778855..1778857,1778903..1778905,
+ 1778909..1778911,1778948..1778950,1778954..1778956))
+ /locus_tag="SARI_01850"
+ /note="putative active site [active]"
+ /db_xref="CDD:197210"
+ misc_feature complement(1778954..1778956)
+ /locus_tag="SARI_01850"
+ /note="catalytic site [active]"
+ /db_xref="CDD:197210"
+ misc_feature complement(1777973..1778596)
+ /locus_tag="SARI_01850"
+ /note="Putative catalytic domain, repeat 2, of Escherichia
+ coli uncharacterized protein ymdC and similar proteins;
+ Region: PLDc_ymdC_like_2; cd09113"
+ /db_xref="CDD:197212"
+ misc_feature complement(1778093..1778506)
+ /locus_tag="SARI_01850"
+ /note="PLD-like domain; Region: PLDc_2; pfam13091"
+ /db_xref="CDD:221916"
+ misc_feature complement(order(1778153..1778155,1778186..1778188,
+ 1778192..1778194,1778231..1778233,1778237..1778239))
+ /locus_tag="SARI_01850"
+ /note="putative active site [active]"
+ /db_xref="CDD:197212"
+ misc_feature complement(1778237..1778239)
+ /locus_tag="SARI_01850"
+ /note="catalytic site [active]"
+ /db_xref="CDD:197212"
+ gene complement(1779345..1779884)
+ /locus_tag="SARI_01851"
+ CDS complement(1779345..1779884)
+ /locus_tag="SARI_01851"
+ /inference="protein motif:HMMPfam:IPR002589"
+ /inference="protein motif:HMMSmart:IPR002589"
+ /inference="similar to AA sequence:INSD:CAD08271.1"
+ /note="'KEGG: reh:H16_A1552 1.1e-45 predicted phosphatase
+ homolog to the C-terminal domain of histone macroH2A1;
+ COG: COG2110 Predicted phosphatase homologous to the
+ C-terminal domain of histone macroH2A1;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570878.1"
+ /db_xref="GI:161503766"
+ /db_xref="InterPro:IPR002589"
+ /translation="MTSRLQVIQGDITQLSVDAIVNAANASLMGGGGVDGAIHRAAGP
+ ALLDACKKIRRQQGECPTGHAVITPAGKLSAKAVIHTVGPVWRGGEHQEAELLEEAYR
+ NCLLLAEANRYRSIAFPAISCGVYGYPRAQAAEIAVRTVSDFITRYALPEQVYFVCYD
+ EETARLYARLLTQQGDDPA"
+ misc_feature complement(1779372..1779875)
+ /locus_tag="SARI_01851"
+ /note="Macro domain, Appr-1"-pase_like family. The
+ macro domain is a high-affinity ADP-ribose binding module
+ found in a variety of proteins as a stand-alone domain or
+ in combination with other domains like in histone macroH2A
+ and some PARPs (poly...; Region: Macro_Appr_pase_like;
+ cd02908"
+ /db_xref="CDD:239236"
+ misc_feature complement(order(1779507..1779515,1779519..1779521,
+ 1779780..1779785,1779789..1779791,1779810..1779812,
+ 1779849..1779854))
+ /locus_tag="SARI_01851"
+ /note="putative ADP-ribose binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:239236"
+ misc_feature complement(order(1779645..1779647,1779780..1779782,
+ 1779792..1779794,1779810..1779812,1779819..1779821))
+ /locus_tag="SARI_01851"
+ /note="putative active site [active]"
+ /db_xref="CDD:239236"
+ gene complement(1779984..1780304)
+ /locus_tag="SARI_01852"
+ CDS complement(1779984..1780304)
+ /locus_tag="SARI_01852"
+ /inference="similar to AA sequence:REFSEQ:YP_216081.1"
+ /note="'COG: NOG18522 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570879.1"
+ /db_xref="GI:161503767"
+ /translation="MVVTKKNIPGVSLCICAFFIHSAMGQQTVQGGVIHFRGAIVEPL
+ CDIYTHGENIDLTCLREGKKHVHRIDLRQTPALPRDIQSIATVRLHYLNAQKNLAVMN
+ IEYR"
+ misc_feature complement(<1780134..1780292)
+ /locus_tag="SARI_01852"
+ /note="Fimbrial protein; Region: Fimbrial; cl01416"
+ /db_xref="CDD:242492"
+ gene complement(1780436..1780858)
+ /gene="csgC"
+ /locus_tag="SARI_01853"
+ CDS complement(1780436..1780858)
+ /gene="csgC"
+ /locus_tag="SARI_01853"
+ /inference="similar to AA sequence:INSD:AAL20075.1"
+ /note="involved in autoagglutination of curliated cells;
+ not involved in production of curli fibers"
+ /codon_start=1
+ /transl_table=11
+ /product="putative autoagglutination protein"
+ /protein_id="YP_001570880.1"
+ /db_xref="GI:161503768"
+ /translation="MALATTPRLTSINLASALIKTGRKPCFFREEIMHTLLLLAALSN
+ QITFITTQQGDIYTVIPQVILSEPCVCQVQILSVRNGTWGQSHTQQKQTLSLPANQPI
+ ELSRLSVNISSEDSVKIILTVSNGQSLHLSQQWPSSAR"
+ misc_feature complement(1780439..1780762)
+ /gene="csgC"
+ /locus_tag="SARI_01853"
+ /note="curli assembly protein CsgC; Provisional; Region:
+ csgC; PRK10102"
+ /db_xref="CDD:182243"
+ gene complement(1780821..1781255)
+ /locus_tag="SARI_01854"
+ CDS complement(1780821..1781255)
+ /locus_tag="SARI_01854"
+ /inference="protein motif:HMMPfam:IPR009742"
+ /inference="similar to AA sequence:INSD:CAD08268.1"
+ /note="'COG: NOG09021 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="cryptic curlin major subunit"
+ /protein_id="YP_001570881.1"
+ /db_xref="GI:161503769"
+ /db_xref="InterPro:IPR009742"
+ /translation="MKLLKVAAFAAIVVSGSALAGVVPQWGGGNSSGPDSTLSIYQYG
+ SANAALALQSDVRKFETTISQSGYGNGADVGQGADNSTIELTQNGFRNNATIDQWNAK
+ NSDITVSQYGGNNAALLNQTASDSDVMVRQVGFGNNATAHQY"
+ misc_feature complement(1780824..1781255)
+ /locus_tag="SARI_01854"
+ /note="major curlin subunit; Provisional; Region: csgA;
+ PRK10051"
+ /db_xref="CDD:182211"
+ misc_feature complement(1780920..1781024)
+ /locus_tag="SARI_01854"
+ /note="Curlin associated repeat; Region: Curlin_rpt;
+ pfam07012"
+ /db_xref="CDD:115652"
+ gene complement(1781294..1781749)
+ /locus_tag="SARI_01855"
+ CDS complement(1781294..1781749)
+ /locus_tag="SARI_01855"
+ /inference="protein motif:HMMPfam:IPR009742"
+ /inference="similar to AA sequence:INSD:AAO69400.1"
+ /note="CsgB; functions as a nucleator in the assembly of
+ curli (coiled surface structures) on the cell surface"
+ /codon_start=1
+ /transl_table=11
+ /product="curlin minor subunit"
+ /protein_id="YP_001570882.1"
+ /db_xref="GI:161503770"
+ /db_xref="InterPro:IPR009742"
+ /translation="MKNKLLFIMLTILGAPGIAIATNYDLARSEYNFAVNELNKTSFN
+ QAAIIGQVGADNSASVRQDGSKLLSVISQEGRNNRARVDQAGNDNFAYIERTGNANDA
+ SISQSAYGYSAAIIQKGSGNKANITQHGTQKTAVVVQKQSHMAIRVTQR"
+ misc_feature complement(1781297..1781749)
+ /locus_tag="SARI_01855"
+ /note="curlin minor subunit CsgB; Provisional; Region:
+ csgB; PRK10101"
+ /db_xref="CDD:182242"
+ misc_feature complement(1781492..1781593)
+ /locus_tag="SARI_01855"
+ /note="Curlin associated repeat; Region: Curlin_rpt;
+ pfam07012"
+ /db_xref="CDD:115652"
+ misc_feature complement(1781360..1781461)
+ /locus_tag="SARI_01855"
+ /note="Curlin associated repeat; Region: Curlin_rpt;
+ pfam07012"
+ /db_xref="CDD:115652"
+ gene 1782529..1782723
+ /locus_tag="SARI_01856"
+ CDS 1782529..1782723
+ /locus_tag="SARI_01856"
+ /inference="similar to AA sequence:INSD:AAX64996.1"
+ /note="'COG: COG2771 DNA-binding HTH domain-containing
+ proteins;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570883.1"
+ /db_xref="GI:161503771"
+ /translation="MITKPSLQATALLQHLKQSLTLTGKLHNIQRTLEDISAGCIVLM
+ DMMEADKKLIHYWQDNLSQL"
+ misc_feature 1782529..>1782714
+ /locus_tag="SARI_01856"
+ /note="DNA-binding transcriptional regulator CsgD;
+ Provisional; Region: PRK10100"
+ /db_xref="CDD:182241"
+ gene 1782755..1782970
+ /locus_tag="SARI_01857"
+ CDS 1782755..1782970
+ /locus_tag="SARI_01857"
+ /inference="similar to AA sequence:INSD:AAX64994.1"
+ /note="'COG: NOG08684 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570884.1"
+ /db_xref="GI:161503772"
+ /translation="MDNFTQAIQSQILGGLLTNINTGKPGRMVTNDFTIDIANRDGQL
+ QLNVTDRKTGRTSTIEVSGLQTQSTDF"
+ misc_feature <1782755..1782967
+ /locus_tag="SARI_01857"
+ /note="Type VIII secretion system (T8SS), CsgF protein;
+ Region: CsgF; cl08082"
+ /db_xref="CDD:244848"
+ gene 1782998..1783809
+ /locus_tag="SARI_01858"
+ /note="Pseudogene compared to gi|16764495|ref|NP_460110.1|
+ putative curli operon transcriptional regulator
+ [Salmonella typhimurium LT2]"
+ gene complement(1783851..1784345)
+ /locus_tag="SARI_01859"
+ CDS complement(1783851..1784345)
+ /locus_tag="SARI_01859"
+ /inference="protein motif:HMMPfam:IPR009476"
+ /inference="similar to AA sequence:INSD:CAD08262.1"
+ /note="'COG: NOG09737 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570885.1"
+ /db_xref="GI:161503773"
+ /db_xref="InterPro:IPR009476"
+ /translation="MMRTMNILLSIAITTGILSGIWGWVAVSLGLLSWAGFLGCTAYF
+ ACPQGGFKGLLISACTLLSGMVWALVIIHGSALAPHLEIVSYVLTGIVAFLMCIQAKH
+ LLLSFVPGTFIGACATFAGQGDWRLVLPSLALGLIFGYAMKNSGLWLASRREQHSAHT
+ AVTK"
+ misc_feature complement(1783896..1784312)
+ /locus_tag="SARI_01859"
+ /note="Protein of unknown function (DUF1097); Region:
+ DUF1097; pfam06496"
+ /db_xref="CDD:219062"
+ gene complement(1784434..1784988)
+ /locus_tag="SARI_01860"
+ CDS complement(1784434..1784988)
+ /locus_tag="SARI_01860"
+ /inference="protein motif:HMMPfam:IPR010395"
+ /inference="similar to AA sequence:INSD:CAD08261.1"
+ /note="'KEGG: vfi:VFA0083 5.7e-10 ynfI; anaerobic dimethyl
+ sulfoxide reductase chain YnfI K00397;
+ COG: COG3381 Uncharacterized component of anaerobic
+ dehydrogenases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570886.1"
+ /db_xref="GI:161503774"
+ /db_xref="InterPro:IPR010395"
+ /translation="MNEFSILCRALGSLYYRQPQDPLLVPLFTLIREGKLATNWPLEQ
+ DDMLARLQKSCDITQISTDYNALFVGEECAVPPYRSAWIEGAEESEVRAFLTSRGMPL
+ GDTPADHIGTLLLAASWLEDQSAEDESEALETLFADYLLPWCNTFLGKVEAHAVTPFW
+ RTLAPLTRDAIGAMWDELQEEDEE"
+ misc_feature complement(1784437..1784988)
+ /locus_tag="SARI_01860"
+ /note="Uncharacterized component of anaerobic
+ dehydrogenases [General function prediction only]; Region:
+ TorD; COG3381"
+ /db_xref="CDD:225916"
+ gene complement(1785012..1785749)
+ /locus_tag="SARI_01861"
+ CDS complement(1785012..1785749)
+ /locus_tag="SARI_01861"
+ /inference="protein motif:HMMPfam:IPR004013"
+ /inference="protein motif:HMMSmart:IPR003141"
+ /inference="similar to AA sequence:INSD:AAL20066.1"
+ /note="'KEGG: eci:UTI89_C1155 2.2e-120 ycdX; hypothetical
+ protein K04477;
+ COG: COG1387 Histidinol phosphatase and related hydrolases
+ of the PHP family;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative hydrolase"
+ /protein_id="YP_001570887.1"
+ /db_xref="GI:161503775"
+ /db_xref="InterPro:IPR003141"
+ /db_xref="InterPro:IPR004013"
+ /translation="MYPVDLHMHTVASTHAYSTLSDYIAEAKRKGIKLFAITDHGPDM
+ EDAPHHWHFINMRIWPRLVDGVGILRGIEANIKNINGEIDCSGKMFDSLDLIIAGFHE
+ LVFAPHDKETNTQAMIATIASGKVHIISHPGNPKYPVEVKAVAQAAAKHHVALEINNS
+ SFLHSRKGSEDNCRAVAAAVRDAGGWVALGSDSHTAFTLGDFTECRKILDAVDFPEDR
+ ILNVSPQRLLSFLESRGMAPVPEFAEL"
+ misc_feature complement(1785015..1785749)
+ /locus_tag="SARI_01861"
+ /note="putative hydrolase; Validated; Region: PRK09248"
+ /db_xref="CDD:236429"
+ misc_feature complement(1785048..1785746)
+ /locus_tag="SARI_01861"
+ /note="Polymerase and Histidinol Phosphatase domain of
+ Ycdx like; Region: PHP_HisPPase_Ycdx_like; cd07437"
+ /db_xref="CDD:213992"
+ misc_feature complement(order(1785168..1785170,1785174..1785176,
+ 1785357..1785359,1785447..1785449,1785531..1785533,
+ 1785630..1785632,1785705..1785707,1785723..1785725,
+ 1785729..1785731))
+ /locus_tag="SARI_01861"
+ /note="active site"
+ /db_xref="CDD:213992"
+ gene complement(1785834..1786772)
+ /locus_tag="SARI_01863"
+ CDS complement(1785834..1786772)
+ /locus_tag="SARI_01863"
+ /inference="protein motif:HMMPfam:IPR006140"
+ /inference="protein motif:ScanRegExp:IPR006140"
+ /inference="similar to AA sequence:REFSEQ:YP_150951.1"
+ /note="'KEGG: eco:b1033 1.4e-134 ycdW; 2-ketoacid
+ reductase K00049;
+ COG: COG0111 Phosphoglycerate dehydrogenase and related
+ dehydrogenases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570888.1"
+ /db_xref="GI:161503777"
+ /db_xref="InterPro:IPR006140"
+ /translation="MEIIFYHPTFNAAWWVNALEKALPHVRVREWKAGDNSPADYALV
+ WQPPVEMLAGRRLKAVFALGAGVDSILSELNTHPEMLDASIPLFRLEDTGMGLQMQEY
+ AVSQVLHWFRRFDDYQALKNQAIWKPLPEYTREEFSVGIMGAGILGSKVAESLQAWGF
+ PLRCWSRSRKSWPGVESYAGREELDAFLNQTRVLINLLPNTAQTVGIINRELLNKLPD
+ SAYVLNLARGVHVNEADLLAALESGKLKGAMLDVFSQEPLPQESPLWRHSRVAMTPHI
+ AAVTRPAEAIEYISRTINQLERGEPVTGQVDRARGY"
+ misc_feature complement(1785837..1786772)
+ /locus_tag="SARI_01863"
+ /note="bifunctional glyoxylate/hydroxypyruvate reductase
+ A; Provisional; Region: ghrA; PRK15469"
+ /db_xref="CDD:185366"
+ misc_feature complement(1785843..1786772)
+ /locus_tag="SARI_01863"
+ /note="Putative glycerate dehydrogenase and related
+ proteins of the D-specific 2-hydroxy dehydrogenase family;
+ Region: GDH_like_2; cd12164"
+ /db_xref="CDD:240641"
+ misc_feature complement(order(1785948..1785950,1786092..1786094,
+ 1786488..1786490,1786575..1786583,1786635..1786637))
+ /locus_tag="SARI_01863"
+ /note="putative ligand binding site [chemical binding];
+ other site"
+ /db_xref="CDD:240641"
+ misc_feature complement(order(1785843..1785845,1785939..1785944,
+ 1785948..1785950,1786017..1786022,1786092..1786100,
+ 1786161..1786166,1786176..1786184,1786263..1786265,
+ 1786269..1786280,1786332..1786346,1786476..1786478,
+ 1786488..1786490,1786506..1786508,1786575..1786580))
+ /locus_tag="SARI_01863"
+ /note="NAD binding site [chemical binding]; other site"
+ /db_xref="CDD:240641"
+ misc_feature complement(order(1785930..1785932,1785942..1785947,
+ 1785951..1785959,1785963..1785965,1785972..1785974,
+ 1785978..1785983,1785993..1785995,1785999..1786007,
+ 1786014..1786016,1786026..1786028,1786299..1786301,
+ 1786371..1786373,1786380..1786382,1786389..1786391,
+ 1786395..1786400,1786410..1786415,1786419..1786424,
+ 1786431..1786433,1786437..1786439,1786446..1786451,
+ 1786458..1786463,1786467..1786475,1786479..1786481))
+ /locus_tag="SARI_01863"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:240641"
+ misc_feature complement(order(1785948..1785950,1786005..1786007,
+ 1786092..1786094))
+ /locus_tag="SARI_01863"
+ /note="catalytic site [active]"
+ /db_xref="CDD:240641"
+ unsure 1786585..1786591
+ /note="Sequence derived from one plasmid subclone"
+ gene 1786771..1786935
+ /locus_tag="SARI_01862"
+ CDS 1786771..1786935
+ /locus_tag="SARI_01862"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570889.1"
+ /db_xref="GI:161503776"
+ /translation="MLSPEQYCAEYDCAYYQRFQRDVQHSKFPGAGKKSSFRLLKPQI
+ GGSLYKRAFF"
+ unsure 1786826..1787093
+ /note="Sequence derived from one plasmid subclone"
+ gene 1787008..1787092
+ /locus_tag="SARI_01864"
+ tRNA 1787008..1787092
+ /locus_tag="SARI_01864"
+ /product="tRNA-Ser"
+ gene 1787752..1788030
+ /locus_tag="SARI_01865"
+ CDS 1787752..1788030
+ /locus_tag="SARI_01865"
+ /inference="similar to AA sequence:INSD:CAD05350.1"
+ /note="'COG: NOG33927 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570890.1"
+ /db_xref="GI:161503778"
+ /translation="MDKRRACEETARRASAASQSPLTAIFKKELVRKYGLFAYMYPPN
+ QGGMRTTDRGSTTGAASWTDDEPARRLPAGRAQRVNPPLTAIFKEELV"
+ gene complement(1788052..1788336)
+ /locus_tag="SARI_01866"
+ CDS complement(1788052..1788336)
+ /locus_tag="SARI_01866"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570891.1"
+ /db_xref="GI:161503779"
+ /translation="MVVLLFDDVALIRSGCTVVPDEAPAAPSGNSRWRNAKKKPVLSY
+ ELFFEDGGEGGLTRCARPAGSLLAGSSFVQLAAPVVEPRTGVLIPPGKVA"
+ gene complement(1788352..1789458)
+ /locus_tag="SARI_01867"
+ CDS complement(1788352..1789458)
+ /locus_tag="SARI_01867"
+ /inference="protein motif:HMMPfam:IPR000683"
+ /inference="protein motif:HMMPfam:IPR004104"
+ /inference="similar to AA sequence:INSD:AAL20064.1"
+ /note="'KEGG: eco:b4280 6.5e-128 yjhC; KpLE2 phage-like
+ element; predicted oxidoreductase;
+ COG: COG0673 Predicted dehydrogenases and related
+ proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570892.1"
+ /db_xref="GI:161503780"
+ /db_xref="InterPro:IPR000683"
+ /db_xref="InterPro:IPR004104"
+ /translation="MMTKYGVVGTGYFGAELARFMSKVEGAQITAIYDPANAAPIAKE
+ LNCVATVTMEALCTHPDVDCVIIASPNYLHKAPVIAAAKAGKHVFCEKPIALNYQDCK
+ EMVDTCKEAGVTFMAGHVMNFFNGVRHAKALIKAGEIGEVTQVHTKRNGFEDVQDEIS
+ WKKIRAKSGGHLYHHIHELDCTLFIMDETPSLVSMAAGNVAHKGEKFGDEDDVVLITL
+ EFESGRFATLQWGSSFHYPEHYVLIEGTTGAILIDMQNTAGYLIKAGKKTHFLVHESQ
+ AEDDDRRNGNISSEMDGAIAYGKPGKRTPMWLSSIMKLEMQYLHDVINGLEPGEEFAK
+ LLTGEAATNAIATADAATLSSNEGRKVKLSEILG"
+ misc_feature complement(1788574..1789458)
+ /locus_tag="SARI_01867"
+ /note="Predicted dehydrogenases and related proteins
+ [General function prediction only]; Region: MviM; COG0673"
+ /db_xref="CDD:223745"
+ misc_feature complement(1789102..1789449)
+ /locus_tag="SARI_01867"
+ /note="Oxidoreductase family, NAD-binding Rossmann fold;
+ Region: GFO_IDH_MocA; pfam01408"
+ /db_xref="CDD:201778"
+ misc_feature complement(1788730..1789068)
+ /locus_tag="SARI_01867"
+ /note="Oxidoreductase family, C-terminal alpha/beta
+ domain; Region: GFO_IDH_MocA_C; pfam02894"
+ /db_xref="CDD:217272"
+ gene complement(1789469..1790749)
+ /locus_tag="SARI_01868"
+ CDS complement(1789469..1790749)
+ /locus_tag="SARI_01868"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="similar to AA sequence:INSD:AAL20063.1"
+ /note="'KEGG: cal:orf19.2425 2.6e-07 highly conserved
+ hypothetical protein K01804;
+ COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative sialic acid transporter"
+ /protein_id="YP_001570893.1"
+ /db_xref="GI:161503781"
+ /db_xref="InterPro:IPR011701"
+ /translation="MIAKFFPWYSEITRPQKNALFSAWLGYVFDGFDFMLIFYIMYLI
+ KVDLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGL
+ ATGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNILAAY
+ FMPSFAEAYGWRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLSSPGKHSPSAWLVFS
+ WSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAA
+ FGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMAT
+ NVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTF
+ IVAFWTATILLIIGLSIPDKLKARRERFLSTKEL"
+ misc_feature complement(1789475..1790749)
+ /locus_tag="SARI_01868"
+ /note="putative sialic acid transporter; Provisional;
+ Region: PRK12307"
+ /db_xref="CDD:237051"
+ misc_feature complement(1789529..1790692)
+ /locus_tag="SARI_01868"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature complement(order(1789640..1789642,1789649..1789654,
+ 1789661..1789666,1789673..1789678,1789709..1789711,
+ 1789718..1789723,1789733..1789735,1789748..1789753,
+ 1789760..1789762,1789901..1789903,1789913..1789915,
+ 1789922..1789924,1789934..1789936,1789946..1789948,
+ 1789985..1789987,1789994..1789999,1790006..1790011,
+ 1790018..1790020,1790285..1790287,1790303..1790308,
+ 1790315..1790320,1790354..1790356,1790363..1790368,
+ 1790375..1790380,1790387..1790392,1790528..1790533,
+ 1790537..1790542,1790552..1790554,1790561..1790566,
+ 1790573..1790575,1790624..1790629,1790633..1790641,
+ 1790648..1790650))
+ /locus_tag="SARI_01868"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene complement(1791032..1791724)
+ /locus_tag="SARI_01869"
+ CDS complement(1791032..1791724)
+ /locus_tag="SARI_01869"
+ /inference="protein motif:HMMPfam:IPR009331"
+ /inference="similar to AA sequence:INSD:CAD08256.1"
+ /note="'COG: NOG15538 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570894.1"
+ /db_xref="GI:161503782"
+ /db_xref="InterPro:IPR009331"
+ /translation="MKINRYLLGMASFIAFSSYLQAATLDYRHEYADRTRINKDRIAI
+ IEKLPNGIGFYVDASVKSGGVDGEQDKHLSDLVANAIELGVSYNYKVTDHVVLQPGFI
+ FESGPDTSIYKPYLRMQYNFDSGVYMAGRYRYDYARKTANYNDDEKTNRFDAYIGYVF
+ DELKLEYDFTWMDSDQIKFDNKKTNYEHNVALAWKLNKSFTPYVEVGNVAVRNNSDER
+ QTRYRVGLQYHF"
+ misc_feature complement(1791035..1791679)
+ /locus_tag="SARI_01869"
+ /note="Oligogalacturonate-specific porin protein (KdgM);
+ Region: KdgM; pfam06178"
+ /db_xref="CDD:218926"
+ gene complement(1791770..1792930)
+ /locus_tag="SARI_01870"
+ CDS complement(1791770..1792930)
+ /locus_tag="SARI_01870"
+ /inference="protein motif:HMMPfam:IPR006652"
+ /inference="protein motif:superfamily:IPR011043"
+ /inference="similar to AA sequence:REFSEQ:YP_216067.1"
+ /note="'COG: COG3055 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="N-acetylneuraminic acid mutarotase"
+ /protein_id="YP_001570895.1"
+ /db_xref="GI:161503783"
+ /db_xref="InterPro:IPR006652"
+ /db_xref="InterPro:IPR011043"
+ /translation="MGMQMKNSKKMMTLMALCLSVAITTSGYATTLPDIPEPLKNGTG
+ AIDNNGVIYVGLGSAGTSWYKIDLKKQHKDWERIKSFPGGAREQSVSVFLNGELYVFG
+ GVGKESNEAPLQVYSDVYKYTPAKNTWQKVNTISPVGLTGHTVVKLNETMALITGGVN
+ EHIFDKYFIDIAAAAGDDSEKNRVIYNYFNKPSKDYFFNKIVFIYNAKENTWENAGEL
+ PGAGTAGSSSAMENNSLTLINGELKPGLRTDVIYRAIWDNDKLTWLKNSQLPPSPGEQ
+ HQEGLAGAFSGYSQGVLLVGGGANFPGAKQNYTDGKFYAHEGINKKWRDEVYGLINGH
+ WQYVGKMKQPLGYGVSVNYGDEIFLIGGENAKGKPVSSVISFAMHDGKLLIE"
+ misc_feature complement(1791773..1792900)
+ /locus_tag="SARI_01870"
+ /note="N-acetylneuraminic acid mutarotase; Provisional;
+ Region: PRK14131"
+ /db_xref="CDD:237617"
+ misc_feature complement(1792529..1792678)
+ /locus_tag="SARI_01870"
+ /note="Kelch motif; Region: Kelch_1; pfam01344"
+ /db_xref="CDD:201739"
+ gene 1793437..1794117
+ /locus_tag="SARI_01871"
+ CDS 1793437..1794117
+ /locus_tag="SARI_01871"
+ /inference="protein motif:HMMPfam:IPR007260"
+ /inference="protein motif:superfamily:IPR011060"
+ /inference="similar to AA sequence:REFSEQ:YP_216066.1"
+ /note="Converts N-acetylmannosamine-6-phosphate to
+ N-acetylglucosamine-6-phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="N-acetylmannosamine-6-phosphate 2-epimerase"
+ /protein_id="YP_001570896.2"
+ /db_xref="GI:448236246"
+ /db_xref="InterPro:IPR007260"
+ /db_xref="InterPro:IPR011060"
+ /translation="MSLLARLEQSVRENGGLIVSCQPVPGSPMDKPEIVAAMTQAAAS
+ AGAVAVRVEGIENLQAVRPHLFVPVIGIIKRDLTESPVRITPYLQDVDALAQAGADII
+ AFDASFRSRPVDIDSLLSRIRLHGLLAMADCSTVSEGVDCHQKGVEFIGTTLSGYTGP
+ ATPVEPDLAMVRQLSHAGCRVIAEGRYNAPALAANAIKHGAWAVTVGSAITRIEHICQ
+ WFSHAVKR"
+ misc_feature 1793437..1794114
+ /locus_tag="SARI_01871"
+ /note="Putative N-acetylmannosamine-6-phosphate epimerase
+ [Carbohydrate transport and metabolism]; Region: NanE;
+ COG3010"
+ /db_xref="CDD:225555"
+ misc_feature 1793437..1794096
+ /locus_tag="SARI_01871"
+ /note="N-acetylmannosamine-6-phosphate epimerase (NanE)
+ converts N-acetylmannosamine-6-phosphate to
+ N-acetylglucosamine-6-phosphate. This reaction is part of
+ the pathway that allows the usage of sialic acid as a
+ carbohydrate source. Sialic acids are a family of...;
+ Region: NanE; cd04729"
+ /db_xref="CDD:240080"
+ misc_feature order(1793494..1793496,1793500..1793502,1793587..1793589,
+ 1793650..1793652,1793656..1793658,1793749..1793751,
+ 1793830..1793832,1793893..1793895,1793905..1793907,
+ 1793986..1793994,1794055..1794057)
+ /locus_tag="SARI_01871"
+ /note="putative active site cavity [active]"
+ /db_xref="CDD:240080"
+ gene 1794454..1795950
+ /locus_tag="SARI_01872"
+ CDS 1794454..1795950
+ /locus_tag="SARI_01872"
+ /inference="protein motif:HMMPanther:IPR001734"
+ /inference="protein motif:HMMPfam:IPR001734"
+ /inference="protein motif:HMMTigr:IPR001734"
+ /inference="similar to AA sequence:REFSEQ:YP_150956.1"
+ /note="'KEGG: rpr:RP465 5.4e-08 phoR; alkaline phosphatase
+ synthesis sensor protein phoR K07636;
+ COG: COG0591 Na+/proline symporter;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570897.1"
+ /db_xref="GI:161503785"
+ /db_xref="InterPro:IPR001734"
+ /translation="MITHSFGIVNYLVLFGYLLAMMLVGVYFSRRQKTADDYFRGGGR
+ VPGWAAGVSVFATTLSSITFMSIPAKAFTSDWTFIIGQYLAIAILPLVFYFYIPFFRK
+ LKVTSAYEYLEARFDVRCRLFASMSFMLFHIGRIAIITFLTVLALRPFIAIDPVILVL
+ LISVMCIIYTWMGGIEGVIWTDVIQGLLLSGSAILIFIVICLKVQGSIGEIFTVAQQA
+ DKFFPATQFHWSWTESTVPVLMIGFLFANIQQFTASQDVVQRYIVTDSIEETKKTLLT
+ NAKLVAVIPVFFFAIGSALFVYYQQHPQLLPAGFNTGGILPLFVVTEMPVGIAGLIIA
+ AIFAAAQSSISSSLNSISSCFNSDIYQRLSHKKRTPENRMKIAKLVILVAGLISSAAS
+ VWLVMADESEIWDAFNSLIGLMGGPMTGLFMLGIFFKRANAGSAVLGIIISVITVLGA
+ RYATDLNFFFYGVIGSLSVVISGVIFAPLFASAPPLVLDEKPSPKVTL"
+ misc_feature 1794469..1795836
+ /locus_tag="SARI_01872"
+ /note="uncharacterized subgroup of the Na(+)/iodide (NIS)
+ cotransporter subfamily; putative solute-binding domain;
+ Region: SLC5sbd_NIS-like_u3; cd11495"
+ /db_xref="CDD:212064"
+ misc_feature order(1794619..1794621,1794628..1794630,1795468..1795470,
+ 1795477..1795482)
+ /locus_tag="SARI_01872"
+ /note="Na binding site [ion binding]; other site"
+ /db_xref="CDD:212064"
+ gene 1796238..1797119
+ /locus_tag="SARI_01873"
+ CDS 1796238..1797119
+ /locus_tag="SARI_01873"
+ /inference="protein motif:HMMPfam:IPR000281"
+ /inference="protein motif:HMMPfam:IPR001347"
+ /inference="similar to AA sequence:REFSEQ:NP_460099.1"
+ /note="'KEGG: bte:BTH_I1550 2.1e-26
+ glucokinase/transcriptional regulator, RpiR family, fusion
+ K00845;
+ COG: COG1737 Transcriptional regulators;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative transcriptional regulator"
+ /protein_id="YP_001570898.1"
+ /db_xref="GI:161503786"
+ /db_xref="InterPro:IPR000281"
+ /db_xref="InterPro:IPR001347"
+ /translation="MESQPPRLKPGKILDTLGAMQKSLTRASQRIAHFILAFPRQVTQ
+ LSIADLSRETQAGEATVIRFCRTLGYKGFQDFKMDLAIELATTEFDDSSSLLDAAVSE
+ SDDAHAIGLKLQNTISNVLSETLNLLDMQQVLGVVDALRHCHSVYIFGVGSSGITALD
+ MKHKLMRIGLRGDAVSNNHFMYMQATLLKAGDVAIGVSHSGTSPETVHSLRLARLAGA
+ TTVAITHNLGSPLCEEADFCLINGNRQGMLQGDSIGTKAAQLFVFDLLYTLLVQSSPE
+ QARESKLRTMNALDMTK"
+ misc_feature 1796262..1797116
+ /locus_tag="SARI_01873"
+ /note="Transcriptional regulators [Transcription]; Region:
+ RpiR; COG1737"
+ /db_xref="CDD:224651"
+ misc_feature 1796274..1796495
+ /locus_tag="SARI_01873"
+ /note="Helix-turn-helix domain, rpiR family; Region:
+ HTH_6; pfam01418"
+ /db_xref="CDD:201784"
+ misc_feature 1796643..1797044
+ /locus_tag="SARI_01873"
+ /note="RpiR-like protein. RpiR contains a SIS (Sugar
+ ISomerase) domain, which is found in many phosphosugar
+ isomerases and phosphosugar binding proteins. In E. coli,
+ rpiR negatively regulates the expression of rpiB gene.
+ Both rpiB and rpiA are ribose phosphate...; Region:
+ SIS_RpiR; cd05013"
+ /db_xref="CDD:240144"
+ misc_feature order(1796697..1796699,1796829..1796831)
+ /locus_tag="SARI_01873"
+ /note="putative active site [active]"
+ /db_xref="CDD:240144"
+ gene complement(1797225..1798013)
+ /locus_tag="SARI_01874"
+ CDS complement(1797225..1798013)
+ /locus_tag="SARI_01874"
+ /inference="protein motif:HMMPfam:IPR003714"
+ /inference="similar to AA sequence:INSD:AAV77646.1"
+ /note="'KEGG: reh:H16_A0527 2.5e-41 phoH; phosphate
+ starvation-inducible protein PhoH,predicted ATPase;
+ COG: COG1702 Phosphate starvation-inducible protein PhoH,
+ predicted ATPase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570899.1"
+ /db_xref="GI:161503787"
+ /db_xref="InterPro:IPR003714"
+ /translation="MGRQKAVIKARREAKRVLRRDSRSHKQREEESVTSLVQMGGVEA
+ IGMARDSRDTSPIKARNEAQAHYLNAIDSKQLIFATGEAGCGKTWISAAKAAEALIHK
+ DVERIIVTRPVLQADEDLGFLPGDIAEKFAPYFRPVYDVLLKRLGASFMQYCLRPEIG
+ KVEIAPFAYMRGRTFENAVVILDEAQNVTAAQMKMFLTRLGENVTVIVNGDITQCDLP
+ AHVQSGLSDALARFNEDEMVGIVRFNKDDCVRSALCQRTLHAYS"
+ misc_feature complement(1797228..1798013)
+ /locus_tag="SARI_01874"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10536"
+ /db_xref="CDD:182529"
+ misc_feature complement(1797228..>1798004)
+ /locus_tag="SARI_01874"
+ /note="Phosphate starvation-inducible protein PhoH,
+ predicted ATPase [Signal transduction mechanisms]; Region:
+ PhoH; COG1702"
+ /db_xref="CDD:224616"
+ gene 1799793..1800983
+ /locus_tag="SARI_01875"
+ CDS 1799793..1800983
+ /locus_tag="SARI_01875"
+ /inference="similar to AA sequence:INSD:ABB68939.1"
+ /note="'COG: COG4886 Leucine-rich repeat (LRR) protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570900.1"
+ /db_xref="GI:161503788"
+ /translation="MIVIHNRLIVLPQLPESLRFLNCSSNRLTALPALPDALDSLYCH
+ TNELEILPTLPNGLQELGYNGNPLATLPVLPASLINLNNDPFAGGATAPLQLIQSIEY
+ WFPLSQRAEMLTRFESIASEENADIFSGFLNRLRHRYREPQYEGFRSQVKECLIRLVD
+ NPELRERLFMCAYESTQTCDDRISLTWNMMRVAEMVFTVEQEGHEGNLPEMVDIARQV
+ FRIEMLTDIATRKIQQLQRIHNTFDEDLEVMLGLQTQLRDTLCLTHVAPDMYFFRFSQ
+ LTEIDVKTAERQVRIAENRQFESWLNNWEPWQMLLKRIDPLWYEKAMDEKYAFVNGPD
+ FQNRLDEKFQLHQVPPEIRDDTSHILGKIVIAEKTQEIFANQTRKILEAKEQSSLLEP
+ TWTE"
+ misc_feature <1799808..1800974
+ /locus_tag="SARI_01875"
+ /note="E3 ubiquitin-protein ligase SlrP; Provisional;
+ Region: PRK15370"
+ /db_xref="CDD:185268"
+ gene 1801105..1802862
+ /locus_tag="SARI_01876"
+ CDS 1801105..1802862
+ /locus_tag="SARI_01876"
+ /inference="similar to AA sequence:INSD:AAN42357.1"
+ /note="'KEGG: ehi:4.t00016 1.6e-05 dual specificity
+ protein phosphatase, putative K04459;
+ COG: COG4886 Leucine-rich repeat (LRR) protein;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570901.1"
+ /db_xref="GI:161503789"
+ /translation="MLPMNNSGRIPIVTPEILPATGKDYPAIWRAWAREAPLGGHELR
+ EMAVERLLACLEKEESLLDLSELNLSSLPELPPLITTLLANDNHLSSLPELPESLQIL
+ ICSFNLLELLPPLPGSLKKLICSSCNLKKLPSLPDSLEELTCSWNPLEGLPLLPMSLK
+ YLTCTNNGFESLPALPESLLTLICSKNPLPNLPDLPASLYSLNCAECQLETLPDLPES
+ LNSLICPRNQLRVIPALPFNLDELNYLENPLLQFPILPPSLTSLNNSPYEGGAAGAAR
+ PLTDSAADWFPAVQQRDIRERFREITHETNAGIFSEFLDRLRNRYADSKYETFRHQVM
+ HCLIRLAASPGLREKLFMCALETTARCDDRISLSWNNMRIAEMAYTVEQLGTEQNLGK
+ MISLAREVFRMELLTEIASQKIIQIRHAHEHFDEDLEVLLGYQTELQHALHLTQVVPD
+ MYFFTCSYLTAEEVKAAKTQVQTAENQRFLEWLSLWEPWQAMLKRLNPAAWGAAESEK
+ NAFTVSEEFQSRIHEKLKTRGSSEFASDEAIQKAGLEVMKEKLRELFMPCTLSTLEAK
+ AQLSLVEPVWDLSGDQAGV"
+ misc_feature <1801159..1801251
+ /locus_tag="SARI_01876"
+ /note="Type III secretion system leucine rich repeat
+ protein; Region: TTSSLRR; pfam12468"
+ /db_xref="CDD:204932"
+ misc_feature <1801486..1802832
+ /locus_tag="SARI_01876"
+ /note="E3 ubiquitin-protein ligase SlrP; Provisional;
+ Region: PRK15370"
+ /db_xref="CDD:185268"
+ gene complement(1802915..1804423)
+ /locus_tag="SARI_01877"
+ CDS complement(1802915..1804423)
+ /locus_tag="SARI_01877"
+ /inference="protein motif:HMMPanther:IPR001734"
+ /inference="protein motif:HMMPfam:IPR001734"
+ /inference="protein motif:HMMTigr:IPR001734"
+ /inference="protein motif:HMMTigr:IPR011851"
+ /inference="protein motif:ScanRegExp:IPR001734"
+ /inference="protein motif:superfamily:IPR008934"
+ /inference="similar to AA sequence:INSD:AAV77647.1"
+ /note="'KEGG: rpr:RP465 3.2e-07 phoR; alkaline phosphatase
+ synthesis sensor protein phoR K07636;
+ COG: COG0591 Na+/proline symporter;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570902.1"
+ /db_xref="GI:161503790"
+ /db_xref="InterPro:IPR001734"
+ /db_xref="InterPro:IPR008934"
+ /db_xref="InterPro:IPR011851"
+ /translation="MAISTPMLVTFCVYILGMLLIGFIAWRSTKNFDDYILGGRSLGP
+ FVTALSAGASDMSGWLLMGLPGAIFLSGISESWIAIGLTLGAWINWKLVAGRLRVHTE
+ FNNNALTLPDYFTGRFEDKSRVLRIISALVILLFFTIYCASGIVAGARLFESTFGMSY
+ ETALWAGAAATIIYTFIGGFLAVSWTDTVQASLMIFALILTPVMVIVGVGGFSESLEV
+ IKQKSIENVDMLKGLNFVAIISLMGWGLGYFGQPHILARFMAADSHYSIVHARRISMT
+ WMILCLAGAVAVGFFGIAYFNNNPALAGAVNQNSERVFIELAQILFNPWIAGILLSAI
+ LAAVMSTLSCQLLVCSSAITEDLYKAFLRKSASQQELVWVGRVMVLVVALIAIALAAN
+ PDNRVLGLVSYAWAGFGAAFGPVVLFSVMWSRMTRNGALAGMIIGAVTVIVWKQYGWL
+ DLYEIIPGFIFGSMGIVVFSLLGKAPTAAIQERFAKADAHYHAAPPSKLQAE"
+ misc_feature complement(1802987..1804408)
+ /locus_tag="SARI_01877"
+ /note="Predicted symporter [General function prediction
+ only]; Region: DhlC; COG4147"
+ /db_xref="CDD:226627"
+ misc_feature complement(1803008..1804402)
+ /locus_tag="SARI_01877"
+ /note="Na(+)/proline cotransporter PutP and related
+ proteins; solute binding domain; Region: SLC5sbd_PutP;
+ cd11475"
+ /db_xref="CDD:212045"
+ misc_feature complement(order(1803401..1803406,1803413..1803415,
+ 1804256..1804258,1804265..1804267))
+ /locus_tag="SARI_01877"
+ /note="Na binding site [ion binding]; other site"
+ /db_xref="CDD:212045"
+ gene 1804843..1808805
+ /gene="putA"
+ /locus_tag="SARI_01878"
+ CDS 1804843..1808805
+ /gene="putA"
+ /locus_tag="SARI_01878"
+ /inference="protein motif:HMMPfam:IPR002086"
+ /inference="protein motif:HMMPfam:IPR002872"
+ /inference="protein motif:HMMPIR:IPR011350"
+ /inference="protein motif:HMMTigr:IPR005933"
+ /inference="protein motif:ScanRegExp:IPR002086"
+ /inference="protein motif:superfamily:IPR010985"
+ /note="proline utilization protein A; multifunctional
+ protein that functions in proline catabolism in the first
+ two enzymatic steps resulting in the conversion of proline
+ to glutamate; in Escherichai coli this protein also
+ self-regulates transcription via a DNA-binding domain at
+ the N-terminus; forms dimers and is a peripherally
+ membrane-associated protein"
+ /codon_start=1
+ /transl_table=11
+ /product="trifunctional transcriptional regulator/proline
+ dehydrogenase/pyrroline-5-carboxylate dehydrogenase"
+ /protein_id="YP_001570903.1"
+ /db_xref="GI:161503791"
+ /db_xref="InterPro:IPR002086"
+ /db_xref="InterPro:IPR002872"
+ /db_xref="InterPro:IPR005933"
+ /db_xref="InterPro:IPR010985"
+ /db_xref="InterPro:IPR011350"
+ /translation="MGTTTMGVKLDDATRERIKTAASRIDRTPHWLIKQAIFSYLDKL
+ ENSDTLPELPALFAGAANESEEPTVPQDEPHQPFLEFAEQILPQSVSRAAITAAWRRP
+ ETDAVSMLMEQARLSPPVAEQAHKLAYQLAEKLRNQKSASGRAGMVQGLLQEFSLSSQ
+ EGVALMCLAEALLRIPDKATRDALIRDKISNGNWQSHIGRSPSLFVNAATWGLLFTGR
+ LVSTHNEANLSRSLNRIIGKSGEPLIRKGVDMAMRLMGEQFVTGETIAQALANARKLE
+ EKGFRYSYDMLGEAALTAADAQAYMVSYQQAIHAIGKASNGRGIYEGPGISIKLSALH
+ PRYSRAQYDRVMEELYPRLKSLTLLARQYDIGLNIDAEEADRLEISLDLLEKLCFEPE
+ LAGWNGIGFVIQAYQKRCPLVIDYLVDLASRSRRRLMIRLVKGAYWDSEIKRAQMEGL
+ EGYPVYTRKVYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYHLAGQNYYPGQY
+ EFQCLHGMGEPLYEQVTGKVADGKLNRPCRIYAPVGTHETLLAYLVRRLLENGANTSF
+ VNRIADATLPLDELVADPVEAVEKLAQQEGQAGIPHPKIPLPRDLYGEGRINSAGLDL
+ ANEHRLASLSSALLSNAMQKWQAKPVLEQPVADSEMTPVINPAEPKDIVGWGREATES
+ EVDQALQNAVNQAPVWFATPPQERAAILQRAAVLMEDQMQQLIGLLVREAGKTFSNAI
+ AEVREAVDFLHYYAGQVRDDFDNETHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNS
+ VLAKPAEQTSLIAAQGIAILLEAGVPPGVVQLLPGRGETVGAQLTADARVRGVMFTGS
+ TEVATLLQRNIATRLDAQGRPIPLIAETGGMNAMIVDSSALTEQVVVDVLASAFDSAG
+ QRCSALRVLCLQDDIAEHTLKMLRGAMAECRMGNPGRLTTDIGPVIDSEAKANIERHI
+ QTMRAKGRPVFQAARENSDDAQEWQTGTFVMPTLIELENFAELEKEVFGPVLHVVRYN
+ RNHLAELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPF
+ GGEGLSGTGPKAGGPLYLYRLLAHRPPNALNTTLTRQDARYPVDAQLKTTLLAPLTTL
+ TQWAADRPALQTICRQFADLAQAGTQRLLPGPTGERNTWTLLPRERVLCLADDEQDAL
+ AQLAAVLAVGSQALWSDDAFHRDLAKRLPAAVAARVQFAKAETLMAQPFDAVIFHGDS
+ DKLRTVCEAVAAREGAIVSVQGFARGESNMLLERLYIERSLSVNTAAAGGNASLMTIG
+ "
+ misc_feature 1804843..1808802
+ /gene="putA"
+ /locus_tag="SARI_01878"
+ /note="trifunctional transcriptional regulator/proline
+ dehydrogenase/pyrroline-5-carboxylate dehydrogenase;
+ Reviewed; Region: putA; PRK11809"
+ /db_xref="CDD:236989"
+ misc_feature 1804852..>1804968
+ /gene="putA"
+ /locus_tag="SARI_01878"
+ /note="Predicted transcriptional regulator
+ [Transcription]; Region: COG3905"
+ /db_xref="CDD:226420"
+ misc_feature 1805149..1806414
+ /gene="putA"
+ /locus_tag="SARI_01878"
+ /note="Proline dehydrogenase [Amino acid transport and
+ metabolism]; Region: PutA; COG0506"
+ /db_xref="CDD:223580"
+ misc_feature 1806769..1808169
+ /gene="putA"
+ /locus_tag="SARI_01878"
+ /note="Delta(1)-pyrroline-5-carboxylate dehydrogenase,
+ PutA; Region: ALDH_PutA-P5CDH; cd07125"
+ /db_xref="CDD:143443"
+ misc_feature order(1807075..1807077,1807177..1807182,1807489..1807491,
+ 1807585..1807596,1808059..1808061,1808104..1808106)
+ /gene="putA"
+ /locus_tag="SARI_01878"
+ /note="Glutamate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:143443"
+ misc_feature order(1807165..1807170,1807246..1807248,1807252..1807257,
+ 1807345..1807347,1807399..1807401,1807408..1807410,
+ 1807417..1807419)
+ /gene="putA"
+ /locus_tag="SARI_01878"
+ /note="NAD binding site [chemical binding]; other site"
+ /db_xref="CDD:143443"
+ misc_feature order(1807177..1807179,1807489..1807491,1807582..1807584,
+ 1807591..1807593)
+ /gene="putA"
+ /locus_tag="SARI_01878"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:143443"
+ gene 1808864..1809259
+ /locus_tag="SARI_01879"
+ CDS 1808864..1809259
+ /locus_tag="SARI_01879"
+ /inference="protein motif:HMMPfam:IPR009739"
+ /inference="similar to AA sequence:INSD:AAV77649.1"
+ /note="'COG: COG3755 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570904.1"
+ /db_xref="GI:161503792"
+ /db_xref="InterPro:IPR009739"
+ /translation="MKRIFLTCAALLFSSQALADECASASTQLEMNRCAAAQYQAADK
+ KLNETYQSAIKRAQPPQRELLQKAQVAWIALRDADCALIRSGTEGGSVQPMIASQCLT
+ DKTNEREAFLASLLQCEEGDLSCPLPPAG"
+ misc_feature 1808864..1809220
+ /locus_tag="SARI_01879"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG3755"
+ /db_xref="CDD:226278"
+ gene complement(1809256..1809894)
+ /locus_tag="SARI_01880"
+ CDS complement(1809256..1809894)
+ /locus_tag="SARI_01880"
+ /inference="protein motif:FPrintScan:IPR001647"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR001647"
+ /inference="protein motif:HMMPfam:IPR013573"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="protein motif:superfamily:IPR011075"
+ /inference="similar to AA sequence:INSD:AAO69421.1"
+ /note="'KEGG: bcl:ABC2937 0.00081 NADH dehydrogenase
+ K03885;
+ COG: COG1309 Transcriptional regulator;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570905.1"
+ /db_xref="GI:161503793"
+ /db_xref="InterPro:IPR001647"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR011075"
+ /db_xref="InterPro:IPR012287"
+ /db_xref="InterPro:IPR013573"
+ /translation="MSQRTEKKIGKRSQAVSAKRRLILTAALAVFSQYGIHGARLEQV
+ AERAGVSKTNLLYYYPSKEALYVAVMRQILDVWLAPLKAFRAEFSPLEAIKEYIRLKL
+ EVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVHSGKLAPVSPH
+ HLIFMIWAATQHYADFAPQVEAVTGATLRDEAFFNQTVESVQRIIIEGIRVR"
+ misc_feature complement(1809259..1809894)
+ /locus_tag="SARI_01880"
+ /note="HTH-type transcriptional regulator RutR;
+ Provisional; Region: PRK15008"
+ /db_xref="CDD:184970"
+ misc_feature complement(1809688..1809828)
+ /locus_tag="SARI_01880"
+ /note="Bacterial regulatory proteins, tetR family; Region:
+ TetR_N; pfam00440"
+ /db_xref="CDD:201228"
+ misc_feature complement(1809259..1809687)
+ /locus_tag="SARI_01880"
+ /note="YcdC-like protein, C-terminal region; Region:
+ TetR_C_3; pfam08362"
+ /db_xref="CDD:203918"
+ gene 1810583..1811179
+ /locus_tag="SARI_01881"
+ CDS 1810583..1811179
+ /locus_tag="SARI_01881"
+ /inference="protein motif:HMMPfam:IPR008254"
+ /inference="protein motif:HMMTigr:IPR010089"
+ /inference="similar to AA sequence:SwissProt:Q8ZQ40"
+ /note="stationary phase protein that binds TrpR repressor"
+ /codon_start=1
+ /transl_table=11
+ /product="TrpR binding protein WrbA"
+ /protein_id="YP_001570906.1"
+ /db_xref="GI:161503794"
+ /db_xref="InterPro:IPR008254"
+ /db_xref="InterPro:IPR010089"
+ /translation="MAKILVLYYSMYGHIETMAHAVAEGAKKVDGAEVIIKRVPETMP
+ PEIFAKAGGKTQNAPVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGA
+ LYGKLGSVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYAAQELFDVSQVRGGTPY
+ GATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG"
+ misc_feature 1810583..1811176
+ /locus_tag="SARI_01881"
+ /note="NAD(P)H:quinone oxidoreductase; Provisional;
+ Region: PRK03767"
+ /db_xref="CDD:179647"
+ misc_feature 1810589..1811017
+ /locus_tag="SARI_01881"
+ /note="NADPH-dependent FMN reductase; Region: FMN_red;
+ pfam03358"
+ /db_xref="CDD:217511"
+ gene 1811200..1811427
+ /locus_tag="SARI_01882"
+ CDS 1811200..1811427
+ /locus_tag="SARI_01882"
+ /inference="similar to AA sequence:INSD:CAD08243.1"
+ /note="'COG: NOG13872 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570907.1"
+ /db_xref="GI:161503795"
+ /translation="MPTQEAKTHRVGEWASLRNTSPEIAEAIFEVANYDEKLAEKIWE
+ EGSDEVLIKAFEKTDKESLFWGEQTIERKNV"
+ misc_feature 1811200..1811424
+ /locus_tag="SARI_01882"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10174"
+ /db_xref="CDD:182285"
+ gene complement(1811461..1812702)
+ /locus_tag="SARI_01883"
+ CDS complement(1811461..1812702)
+ /locus_tag="SARI_01883"
+ /inference="protein motif:HMMPfam:IPR000560"
+ /inference="protein motif:ScanRegExp:IPR000560"
+ /inference="protein motif:superfamily:IPR011047"
+ /inference="similar to AA sequence:REFSEQ:YP_150966.1"
+ /note="'KEGG: spt:SPA1733 5.5e-218 agp;
+ glucose-1-phosphatase precursor (G1Pase), secreted
+ K01085;
+ COG: NOG06767 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="glucose-1-phosphatase/inositol phosphatase"
+ /protein_id="YP_001570908.1"
+ /db_xref="GI:161503796"
+ /db_xref="InterPro:IPR000560"
+ /db_xref="InterPro:IPR011047"
+ /translation="MKKSLLVVAVAGAILLSSAVQAQTTPEGYQLQQVLMISRHNLRA
+ PLANNGSVLAQSTPNAWPTWDVPGGQLTTKGGVLEVYMGHYTREWLVAQGLIPSGECP
+ APDTVYAYANSLQRTVATAQFFITGAFPGCDIPVHHQEKMGAMDPTFNPVITDDSAAF
+ RQQAVQAMEKARSQKHLDESYKLLEQITHYQDSPSCKEKHQCSLIDAKDTFSANYQQE
+ PGVQGPLKVGNSLVDAFTLQYYEGFPLDQVAWGKINTDRQWNVLSKLKNGYQDSLFTS
+ PTVARNIAAPLVKYIDKVLVADRVSAPKITVLVGHDSNIASLLTALDFKPYQLHDQYE
+ KTPIGGQLVFQRWHDGKANRDLMKVEYVYQSARQLRNAEALTLKSPAQRVTLELKGCP
+ VDANGFCPLDKFDNVMNAAAK"
+ misc_feature complement(1811464..1812702)
+ /locus_tag="SARI_01883"
+ /note="glucose-1-phosphatase/inositol phosphatase;
+ Provisional; Region: PRK10173"
+ /db_xref="CDD:182284"
+ misc_feature complement(<1812283..1812615)
+ /locus_tag="SARI_01883"
+ /note="Histidine phosphatase domain found in histidine
+ acid phosphatases and phytases; contains a His residue
+ which is phosphorylated during the reaction; Region:
+ HP_HAP_like; cd07061"
+ /db_xref="CDD:132717"
+ misc_feature complement(order(1812355..1812357,1812574..1812576,
+ 1812583..1812588))
+ /locus_tag="SARI_01883"
+ /note="catalytic core [active]"
+ /db_xref="CDD:132717"
+ misc_feature complement(1811620..>1812018)
+ /locus_tag="SARI_01883"
+ /note="Histidine phosphatase domain found in histidine
+ acid phosphatases and phytases; contains a His residue
+ which is phosphorylated during the reaction; Region:
+ HP_HAP_like; cd07061"
+ /db_xref="CDD:132717"
+ unsure 1812710..1812713
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(1812834..1813340)
+ /locus_tag="SARI_01884"
+ CDS complement(1812834..1813340)
+ /locus_tag="SARI_01884"
+ /inference="protein motif:BlastProDom:IPR011594"
+ /inference="protein motif:Gene3D:IPR012335"
+ /inference="protein motif:HMMPfam:IPR013740"
+ /inference="protein motif:superfamily:IPR012336"
+ /inference="similar to AA sequence:REFSEQ:NP_460089.1"
+ /note="'KEGG: ava:Ava_4761 1.2e-09 THIoredoxin K03671;
+ COG: COG0526 Thiol-disulfide isomerase and THIoredoxins;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570909.1"
+ /db_xref="GI:161503797"
+ /db_xref="InterPro:IPR011594"
+ /db_xref="InterPro:IPR012335"
+ /db_xref="InterPro:IPR012336"
+ /db_xref="InterPro:IPR013740"
+ /translation="MAGKLRRWLREAAVFLALLIAIIVVMDVWRAPQAPPAFAATPLR
+ TLTGESTTLATLSEERPVLLYFWASWCGICRFTTPAVARLAAEGENVMTVALRSGDDA
+ EVARWLTRKGVDFPVVNDANGALSARWEISVTPTLVVVSQGRVVFTTSGWTSYWGMKL
+ RLWWAKTF"
+ misc_feature complement(1812852..1813208)
+ /locus_tag="SARI_01884"
+ /note="TlpA-like family, suppressor for copper sensitivity
+ D protein (ScsD) and actinobacterial DsbE homolog
+ subfamily; composed of ScsD, the DsbE homolog of
+ Mycobacterium tuberculosis (MtbDsbE) and similar proteins,
+ all containing a redox-active CXXC motif; Region:
+ TlpA_like_ScsD_MtbDsbE; cd03011"
+ /db_xref="CDD:239309"
+ misc_feature complement(1812906..1813163)
+ /locus_tag="SARI_01884"
+ /note="Thioredoxin-like; Region: Thioredoxin_8; pfam13905"
+ /db_xref="CDD:222448"
+ misc_feature complement(order(1813119..1813121,1813128..1813130))
+ /locus_tag="SARI_01884"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:239309"
+ gene complement(1813330..1813953)
+ /locus_tag="SARI_01885"
+ CDS complement(1813330..1813953)
+ /locus_tag="SARI_01885"
+ /inference="protein motif:Gene3D:IPR012335"
+ /inference="protein motif:HMMPfam:IPR001853"
+ /inference="protein motif:ScanRegExp:IPR006662"
+ /inference="protein motif:superfamily:IPR012336"
+ /inference="similar to AA sequence:REFSEQ:YP_150968.1"
+ /note="'KEGG: azo:azo0382 2.8e-05 dsbA; putative protein
+ disulfide-isomerase K01829;
+ COG: COG1651 Protein-disulfide isomerase;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570910.1"
+ /db_xref="GI:161503798"
+ /db_xref="InterPro:IPR001853"
+ /db_xref="InterPro:IPR006662"
+ /db_xref="InterPro:IPR012335"
+ /db_xref="InterPro:IPR012336"
+ /translation="MKYMIVLLLALFSTLSIAQETAPFTPEQEKQIENLIHTALFNDP
+ ASPRIGAKHPKLTLVNFTDYNCPYCKQLDPMLEKIVQKYPDVAVIIKPLPFKGESSIL
+ AARIALTTWREHPQQFLALHEKLMQKRGYHTDDSIKQAQQKAGATPVTLDEKSMETIR
+ TNLQLARLVGVQGTPATIIGDELIPGAVPWDTLEAVVKEKLAAANGG"
+ misc_feature complement(<1813705..1813953)
+ /locus_tag="SARI_01885"
+ /note="conjugal transfer protein TrbB; Provisional;
+ Region: PRK13728; cl17283"
+ /db_xref="CDD:247837"
+ misc_feature complement(1813360..1813806)
+ /locus_tag="SARI_01885"
+ /note="DsbA family, Com1-like subfamily; composed of
+ proteins similar to Com1, a 27-kDa outer
+ membrane-associated immunoreactive protein originally
+ found in both acute and chronic disease strains of the
+ pathogenic bacteria Coxiella burnetti. It contains a
+ CXXC...; Region: DsbA_Com1_like; cd03023"
+ /db_xref="CDD:239321"
+ misc_feature complement(1813372..1813785)
+ /locus_tag="SARI_01885"
+ /note="DSBA-like thioredoxin domain; Region: DSBA;
+ pfam01323"
+ /db_xref="CDD:216433"
+ misc_feature complement(order(1813747..1813749,1813756..1813758))
+ /locus_tag="SARI_01885"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:239321"
+ gene complement(1813950..1815836)
+ /locus_tag="SARI_01886"
+ CDS complement(1813950..1815836)
+ /locus_tag="SARI_01886"
+ /inference="protein motif:Gene3D:IPR012335"
+ /inference="protein motif:superfamily:IPR012336"
+ /note="'KEGG: xcv:XCV0567 3.2e-53 putative C-type
+ cytochrome biogenesis protein K04084;
+ COG: COG4233 Uncharacterized protein predicted to be
+ involved in C-type cytochrome biogenesis;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570911.1"
+ /db_xref="GI:161503799"
+ /db_xref="InterPro:IPR012335"
+ /db_xref="InterPro:IPR012336"
+ /translation="MMILFRRILFCLLWLWLPVSWAAESGWLRSPDNDHASIRLRADT
+ SANGETRLLLDVKLENGWKTYWRAPGEGGVAPSIAWKGDMLEVSWFWPTPSRFDVANI
+ TTQGYHDEVTFPMIVRGTPPATLNGVLTLSTCSNVCLLTDYPFSVTPTVQNADFAHDY
+ ARAMGKVPLRSGLTDSLEVGYRTGELVVTATRAAGWSSPGLYLDTIDDVDFGKPRLRI
+ EGDRLQATVPVTDSWGEKAPDLRDKSLTLVLADGAIAQESTQTIGAASALTPDNAALP
+ FWQVVLMALVGGLILNLMPCVLPVLGMKLGSILLVEEKSRSHIRRQFLASVAGIIASF
+ MALAAFMTLLRLSNHALAWGVQFQNVWFIGFMTLVMLLFSASLFGLFEFRLPSSMTTK
+ LATYGGNGMSGHFWQGAFATLLATPCSAPFLGTAVAVALTASLPTLWGLFLALGLGMS
+ APWLLVAIRPGLALRLPRPGRWMNVLRRFLGLMMLGSAIWLATLLLPHFGFTASKSAQ
+ DTVQWQPLSEQAIQSALAQHKRVFVDVTADWCITCKVNKYNVLQKEDVQAALQQPDVV
+ ALRGDWTLPSDDITDFLKTRGQVAVPFNQVYGPGLPEGEALPTLLTRDAVLQTLKKAK
+ GITQ"
+ misc_feature complement(1815048..1815836)
+ /locus_tag="SARI_01886"
+ /note="Uncharacterized protein predicted to be involved in
+ C-type cytochrome biogenesis [Posttranslational
+ modification, protein turnover, chaperones / Energy
+ production and conversion]; Region: COG4233"
+ /db_xref="CDD:226686"
+ misc_feature complement(1814361..1815026)
+ /locus_tag="SARI_01886"
+ /note="Cytochrome c biogenesis protein [Posttranslational
+ modification, protein turnover, chaperones]; Region: CcdA;
+ COG0785"
+ /db_xref="CDD:223856"
+ misc_feature complement(1814358..1814987)
+ /locus_tag="SARI_01886"
+ /note="Cytochrome C biogenesis protein transmembrane
+ region; Region: DsbD; cl15788"
+ /db_xref="CDD:247070"
+ misc_feature complement(1813974..1814285)
+ /locus_tag="SARI_01886"
+ /note="DsbD gamma family; DsbD gamma is the C-terminal
+ periplasmic domain of the bacterial protein DsbD. It
+ contains a CXXC motif in a TRX fold and shuttles the
+ reducing potential from the membrane domain (DsbD beta) to
+ the N-terminal periplasmic domain (DsbD...; Region:
+ DsbDgamma; cd02953"
+ /db_xref="CDD:239251"
+ misc_feature complement(order(1813980..1813982,1814007..1814015,
+ 1814022..1814027,1814031..1814033,1814061..1814069,
+ 1814190..1814195,1814205..1814207,1814211..1814213,
+ 1814217..1814225))
+ /locus_tag="SARI_01886"
+ /note="DsbD alpha interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:239251"
+ misc_feature complement(order(1814208..1814210,1814217..1814219))
+ /locus_tag="SARI_01886"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:239251"
+ gene complement(1815739..1815888)
+ /locus_tag="SARI_01887"
+ CDS complement(1815739..1815888)
+ /locus_tag="SARI_01887"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570912.1"
+ /db_xref="GI:161503800"
+ /translation="MTDRLLLTVNYSFTEKKYDDFVQADTVLPVMALAARLLGGGKRL
+ AAFAR"
+ gene complement(1815885..1816247)
+ /locus_tag="SARI_01888"
+ CDS complement(1815885..1816247)
+ /locus_tag="SARI_01888"
+ /inference="similar to AA sequence:INSD:AAX64970.1"
+ /note="'COG: NOG29928 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570913.1"
+ /db_xref="GI:161503801"
+ /translation="MAKQQRMGWWFLCLVCVVVMVCTAQRMAGLHALQMQATTSSTLV
+ SAHPSTDDASPVTPCELSAKSLLAAPPVLFEGAILALCLLFSLLAAVRVMRLPFSPPR
+ AISPPTLRVHLRFCVFRE"
+ gene 1816482..1817402
+ /locus_tag="SARI_01889"
+ CDS 1816482..1817402
+ /locus_tag="SARI_01889"
+ /inference="protein motif:HMMPfam:IPR001623"
+ /inference="protein motif:HMMPfam:IPR002939"
+ /inference="protein motif:HMMSmart:IPR001623"
+ /inference="protein motif:ScanRegExp:IPR001623"
+ /inference="protein motif:superfamily:IPR001623"
+ /inference="protein motif:superfamily:IPR008971"
+ /inference="similar to AA sequence:INSD:AAV77658.1"
+ /note="'functional analog of DnaJ; co-chaperone with DnaK,
+ molecular chaperone in an adaptive response to
+ environmental stresses other than heat shock'"
+ /codon_start=1
+ /transl_table=11
+ /product="curved DNA-binding protein CbpA"
+ /protein_id="YP_001570914.1"
+ /db_xref="GI:161503802"
+ /db_xref="InterPro:IPR001623"
+ /db_xref="InterPro:IPR002939"
+ /db_xref="InterPro:IPR008971"
+ /translation="MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEA
+ RFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNRQFQQHEGQPYNAEDFDDIFSSIF
+ GQHGRHSHHRHAARGHDIEIEVAVFLEETLEEHQRTISYSVPVYNAFGLVEREIPRTL
+ NVKIPAGVSNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVNQDLEVVLPLA
+ PWEAALGAKVSVPTLKERILLTIPPGSQAGQRLRIKGKGLASKKHTGDLYAVIKIVMP
+ PKPDEKTAALWQQLADAQSSFDPRQQWGKA"
+ misc_feature 1816482..1817399
+ /locus_tag="SARI_01889"
+ /note="curved DNA-binding protein CbpA; Provisional;
+ Region: PRK10266"
+ /db_xref="CDD:182347"
+ misc_feature 1816494..1816655
+ /locus_tag="SARI_01889"
+ /note="DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock
+ protein 40) proteins are highly conserved and play crucial
+ roles in protein translation, folding, unfolding,
+ translocation, and degradation. They act primarily by
+ stimulating the ATPase activity of Hsp70s; Region: DnaJ;
+ cd06257"
+ /db_xref="CDD:99751"
+ misc_feature order(1816578..1816586,1816608..1816610,1816617..1816622,
+ 1816629..1816634)
+ /locus_tag="SARI_01889"
+ /note="HSP70 interaction site [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99751"
+ misc_feature 1816836..1817315
+ /locus_tag="SARI_01889"
+ /note="C-terminal substrate binding domain of DnaJ and
+ HSP40; Region: DnaJ_C; cd10747"
+ /db_xref="CDD:199909"
+ misc_feature order(1816845..1816847,1816890..1816907,1816950..1816952,
+ 1817022..1817024)
+ /locus_tag="SARI_01889"
+ /note="substrate binding site [polypeptide binding]; other
+ site"
+ /db_xref="CDD:199909"
+ misc_feature order(1817136..1817141,1817148..1817153,1817211..1817222,
+ 1817304..1817315)
+ /locus_tag="SARI_01889"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:199909"
+ gene 1817402..1817707
+ /locus_tag="SARI_01890"
+ CDS 1817402..1817707
+ /locus_tag="SARI_01890"
+ /inference="similar to AA sequence:INSD:AAL20043.1"
+ /note="with CpbA modulates the activity of the dnaK
+ chaperone system; interacts with CbpA and inhibits both
+ the DnaJ-like co-chaperone activity and the DNA binding
+ activity of CbpA"
+ /codon_start=1
+ /transl_table=11
+ /product="chaperone-modulator protein CbpM"
+ /protein_id="YP_001570915.1"
+ /db_xref="GI:161503803"
+ /translation="MANITVTFTITEFCLHTGVTEEELNEIVGLGVIEPYEDDNANWQ
+ FDDRAASVVQRALRLREELALDWPGIAVALTLLEENSRLREENRQLLLRLSRFISHP"
+ misc_feature 1817402..1817704
+ /locus_tag="SARI_01890"
+ /note="chaperone-modulator protein CbpM; Provisional;
+ Region: PRK10265"
+ /db_xref="CDD:182346"
+ misc_feature 1817423..>1817626
+ /locus_tag="SARI_01890"
+ /note="MerR HTH family regulatory protein; Region: MerR_2;
+ pfam13591"
+ /db_xref="CDD:205769"
+ gene complement(1819122..1820060)
+ /locus_tag="SARI_01891"
+ CDS complement(1819122..1820060)
+ /locus_tag="SARI_01891"
+ /inference="protein motif:HMMPfam:IPR001279"
+ /inference="similar to AA sequence:INSD:CAD08235.1"
+ /note="'KEGG: aha:AHA_1197 4.2e-30 ribonuclease Z,
+ putative K00784;
+ COG: COG1234 Metal-dependent hydrolases of the
+ beta-lactamase superfamily III;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570916.1"
+ /db_xref="GI:161503804"
+ /db_xref="InterPro:IPR001279"
+ /translation="MFKNRVAMLAVCMLAQSHLAIAAGAPAPQEINIVLLGTKGGPSL
+ LNTDRLPQATALTIGDKIWLIDAGYGASLQLVKNGIPVRNINTILLTHLHSDHILDYP
+ SLLMNAWASGLKDHIIQVYGPPGTQAMTKASWKVFDRDITLRMEEEGKPDPRKLVKAT
+ DIGQGVIYRDELVTISALKVPHSPFPDGEAFAYRFDTQGKRIVFSGDTSWFPPLATFA
+ QGADILVHEAVHVPSVAKLADSIGNGKTLAEAIASHHTTIEDVGKIAREAHVKKLVLS
+ HLVPATVTDDVWQQEAMKNYQGPVIVGHDNMTINVP"
+ misc_feature complement(1819125..1819970)
+ /locus_tag="SARI_01891"
+ /note="Metal-dependent hydrolases of the beta-lactamase
+ superfamily III [General function prediction only];
+ Region: ElaC; COG1234"
+ /db_xref="CDD:224155"
+ gene complement(1820074..1820970)
+ /locus_tag="SARI_01892"
+ CDS complement(1820074..1820970)
+ /locus_tag="SARI_01892"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR000005"
+ /inference="protein motif:HMMPfam:IPR013096"
+ /inference="protein motif:HMMSmart:IPR000005"
+ /inference="protein motif:HMMTigr:IPR011983"
+ /inference="protein motif:ScanRegExp:IPR000005"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="protein motif:superfamily:IPR011051"
+ /inference="similar to AA sequence:REFSEQ:NP_460081.1"
+ /note="'KEGG: bli:BL05281 1.1e-06 adaA;
+ methylphosphotriester-DNA alkyltransferase and
+ transcriptional regulator (AraC/XylS family) K00567;
+ COG: COG2207 AraC-type DNA-binding domain-containing
+ proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570917.1"
+ /db_xref="GI:161503805"
+ /db_xref="InterPro:IPR000005"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR011051"
+ /db_xref="InterPro:IPR011983"
+ /db_xref="InterPro:IPR012287"
+ /db_xref="InterPro:IPR013096"
+ /translation="MCQRAIANIDISKEYDESMGSNDVHYQSFARMADFFGRDMQAHR
+ HDQFFQMHFLDTGQIELQLDDHRYSVQAPLFVLTPPSVPHAFITESDSDGHVLTVREE
+ LVWPLLEVLYPGTREAFGLPGICLSLADKPNELAALKHYWQLIERESTEQLAGCEHTL
+ VLLAQAVFTLLLRNAKLDDHAATGMRGELKLFQRFTLLIDNHFHQHWTVPDYACELHI
+ TESRLTDICRRFANRPPKRLIFDRQLREAKRLLLFSDNAVNEIAWQLGFKDPAYFARF
+ FNRLAGCSPSQFRQREVPPFLN"
+ misc_feature complement(1820098..1820958)
+ /locus_tag="SARI_01892"
+ /note="4-hydroxyphenylacetate catabolism regulatory
+ protein HpaA; Region: HpaA; TIGR02297"
+ /db_xref="CDD:131350"
+ misc_feature complement(1820674..1820862)
+ /locus_tag="SARI_01892"
+ /note="Cupin domain; Region: Cupin_2; pfam07883"
+ /db_xref="CDD:219618"
+ misc_feature complement(1820101..1820217)
+ /locus_tag="SARI_01892"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ gene complement(1820980..1822356)
+ /locus_tag="SARI_01894"
+ CDS complement(1820980..1822356)
+ /locus_tag="SARI_01894"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="protein motif:HMMTigr:IPR012707"
+ /inference="similar to AA sequence:REFSEQ:YP_150975.1"
+ /note="'COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570918.1"
+ /db_xref="GI:161503807"
+ /db_xref="InterPro:IPR011701"
+ /db_xref="InterPro:IPR012707"
+ /translation="MSDTSSALPESPESVSSHNALSTGQQTVINKLFRRLIVFLFVLF
+ IFSFLDRINIGFAGLTMGQDLGLSATMFGLATTLFYATYVIFGIPSNVMLSIVGARRW
+ IATIMVLWGIASTATMFAVGPKSLYVLRMLVGITEAGFLPGILLYLTYWFPAFFRARA
+ NALFMIAMPATTALGSIVSGYILSLDGIFNLHGWQWLFLLEGFPSVLLGIMVWFYLDD
+ TPAKAKWLTTEDKKCLQEMRDNDRLTLVQPEGAISHNAMQQRSLWREVFTPIVLMYTL
+ AYFCLTNTLSAISIWTPQILKSFNESSSNITIGLLAAIPQICTILGMIYWSRHSDKHQ
+ ERKHHTALPFLFAAAGWLLASATDHNLIQLLGIVMASTGSFSAMAIFWTTPDQSISLR
+ ARAIGIAVINATGNIGSALSPFMIGWLKDITGSFNSGLWFVASLLVVGAAIIWLIPMK
+ VSRPRATP"
+ misc_feature complement(1821013..1822209)
+ /locus_tag="SARI_01894"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature complement(1821040..1822209)
+ /locus_tag="SARI_01894"
+ /note="4-hydroxyphenylacetate permease; Region: HpaX;
+ TIGR02332"
+ /db_xref="CDD:131385"
+ misc_feature complement(order(1821130..1821132,1821139..1821144,
+ 1821151..1821156,1821163..1821168,1821199..1821201,
+ 1821208..1821213,1821223..1821225,1821232..1821237,
+ 1821244..1821246,1821388..1821390,1821400..1821402,
+ 1821409..1821411,1821421..1821423,1821433..1821435,
+ 1821478..1821480,1821487..1821492,1821499..1821504,
+ 1821511..1821513,1821841..1821843,1821859..1821864,
+ 1821871..1821876,1821910..1821912,1821919..1821924,
+ 1821931..1821936,1821943..1821948,1822084..1822089,
+ 1822093..1822098,1822108..1822110,1822117..1822122,
+ 1822129..1822131,1822180..1822185,1822189..1822197,
+ 1822204..1822206))
+ /locus_tag="SARI_01894"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene 1822289..1822432
+ /locus_tag="SARI_01893"
+ CDS 1822289..1822432
+ /locus_tag="SARI_01893"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570919.1"
+ /db_xref="GI:161503806"
+ /translation="MLSALCELTDSGLSGSADDVSLIFFPLMGIFIGYYGCPVALRLP
+ GRA"
+ gene complement(1822429..1823220)
+ /locus_tag="SARI_01895"
+ CDS complement(1822429..1823220)
+ /locus_tag="SARI_01895"
+ /inference="protein motif:HMMPfam:IPR005000"
+ /inference="protein motif:HMMTigr:IPR012689"
+ /inference="similar to AA sequence:INSD:AAO69435.1"
+ /note="'KEGG: sty:STY1140 4.7e-134 hpcH, hpaI;
+ 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K02510;
+ COG: COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid
+ aldolase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570920.1"
+ /db_xref="GI:161503808"
+ /db_xref="InterPro:IPR005000"
+ /db_xref="InterPro:IPR012689"
+ /translation="MKNAFKDALKAGRPQIGLWLGLANSYSAELVAGAGFDWLLIDGE
+ HAPNNVQTVLTQLQAIAPYPSQPVVRPSWNDPVQIKQLLDVGAQTLLVPMVQNADEAR
+ DAVAATRYPPAGIRGVGSALARASRWNRIPDYLHEANDAMCVLVQIETREAMSNLASI
+ LDVDGIDGVFIGPADLSADMGFAGNPQHPAVQAAIENAIVQIRAAGKAPGILMANEAL
+ AKRYLELGALFVAVGVDTTLLARGAEALAARFGAEKKLSGASGVY"
+ misc_feature complement(1822507..1823214)
+ /locus_tag="SARI_01895"
+ /note="HpcH/HpaI aldolase/citrate lyase family; Region:
+ HpcH_HpaI; cl17231"
+ /db_xref="CDD:247785"
+ gene complement(1823231..1824034)
+ /locus_tag="SARI_01896"
+ CDS complement(1823231..1824034)
+ /locus_tag="SARI_01896"
+ /inference="protein motif:BlastProDom:IPR002607"
+ /inference="protein motif:HMMPfam:IPR002607"
+ /inference="protein motif:HMMTigr:IPR012690"
+ /inference="similar to AA sequence:REFSEQ:YP_150977.1"
+ /note="'KEGG: sty:STY1139 2.9e-141 hpcG;
+ 2-oxo-hepta-3-ene-1,7-dioic acid hydratase K02509;
+ COG: COG3971 2-keto-4-pentenoate hydratase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570921.1"
+ /db_xref="GI:161503809"
+ /db_xref="InterPro:IPR002607"
+ /db_xref="InterPro:IPR012690"
+ /translation="MLDKQTHTLIAQRLNQAEKQREQIRAVSLDYPNITIEDAYAVQR
+ EWVNIKIAEGRTLKGHKIGLTSKAMQASSQISEPDYGALLDDMFFHDGGDIPTDRFIV
+ PRIEVELAFVLAKPLRGPNCTLFDVYNATDYVIPALELIDARSHNIDPETQRPRKVFD
+ TISDNAANAGVILGGRPIKPDELDLRWISALLYRNGVIEETGVAAGVLNHPANGVAWL
+ ANKLAPYDVQLEAGQIILGGSFTRPVPARKGDTFHVDYGNMGAISCRFV"
+ misc_feature complement(1823234..1824034)
+ /locus_tag="SARI_01896"
+ /note="2-oxo-hepta-3-ene-1,7-dioic acid hydratase; Region:
+ HpaH; TIGR02312"
+ /db_xref="CDD:131365"
+ gene complement(1824113..1824493)
+ /locus_tag="SARI_01898"
+ CDS complement(1824113..1824493)
+ /locus_tag="SARI_01898"
+ /inference="protein motif:HMMPfam:IPR004220"
+ /inference="similar to AA sequence:REFSEQ:NP_460077.1"
+ /note="'KEGG: sec:SC1054 2.3e-61 hpaF;
+ 4-hydroxyphenylacetate catabolism K01826;
+ COG: COG3232 5-carboxymethyl-2-hydroxymuconate isomerase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570922.1"
+ /db_xref="GI:161503811"
+ /db_xref="InterPro:IPR004220"
+ /translation="MPHFIAECTENIREQADLPGLFSKVNDALAATGIFPMGGIRSRA
+ HWLDTWQMADDKHDYAFVHMTLKIGAGRSLESRQDVGEMLFGLIKAHFAALMKSRYLA
+ LSFEIAELHPTLNYKQNNVHALFK"
+ misc_feature complement(1824152..1824490)
+ /locus_tag="SARI_01898"
+ /note="5-carboxymethyl-2-hydroxymuconate isomerase (CHMI)
+ is a trimeric enzyme catalyzing the isomerization of the
+ unsaturated ketone 5-(carboxymethyl)-2-hydroxymuconate to
+ 5-(carboxymethyl)-2-oxo-3-hexene-1,6-dionate. This is one
+ step in the...; Region: CHMI; cd00580"
+ /db_xref="CDD:238324"
+ misc_feature complement(order(1824278..1824280,1824287..1824289,
+ 1824371..1824373,1824377..1824379,1824488..1824490))
+ /locus_tag="SARI_01898"
+ /note="putative substrate binding pocket [chemical
+ binding]; other site"
+ /db_xref="CDD:238324"
+ misc_feature complement(order(1824152..1824154,1824170..1824193,
+ 1824227..1824229,1824239..1824241,1824260..1824265,
+ 1824293..1824295,1824305..1824307,1824317..1824319,
+ 1824335..1824376,1824380..1824385,1824416..1824418,
+ 1824425..1824427,1824473..1824475,1824485..1824487))
+ /locus_tag="SARI_01898"
+ /note="trimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238324"
+ gene 1824485..1825312
+ /locus_tag="SARI_01897"
+ CDS 1824485..1825312
+ /locus_tag="SARI_01897"
+ /inference="similar to AA sequence:REFSEQ:ZP_01567955.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570923.1"
+ /db_xref="GI:161503810"
+ /translation="MRHKLSLRRQWENGVNLPGPGAGEQVGDKFYLAVVFVPAQHSQQ
+ HYRVMHVAFAVAVVGVLRQHGAELLEFPLAPQLDHAFVHLMIELAGVAVHPLFRPLVV
+ NKTMRQRTAGEHRYGAVIFLNRLNDRFSQLATVGKVVNGAERRDGDHFEVLIAVHIAH
+ RHQSAVLQLQAWDVVRFGAHAELDRFVGDKVPQLRIAVIVIGHVANKVRQFVAGIDPL
+ EMVGTVNVVGAVHQPVGVEHNNGVDAHFATTLANLDMSINGSLTTAVIFSRQFRKIH"
+ gene complement(1824503..1825354)
+ /locus_tag="SARI_01899"
+ CDS complement(1824503..1825354)
+ /locus_tag="SARI_01899"
+ /inference="protein motif:Gene3D:IPR004183"
+ /inference="protein motif:HMMPfam:IPR004183"
+ /inference="protein motif:HMMTigr:IPR011984"
+ /inference="similar to AA sequence:REFSEQ:NP_460076.1"
+ /note="'KEGG: stm:STM1103 1.3e-154 hpaD;
+ 4-hydroxyphenylacetate catabolism K00455;
+ COG: COG3384 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570924.1"
+ /db_xref="GI:161503812"
+ /db_xref="InterPro:IPR004183"
+ /db_xref="InterPro:IPR011984"
+ /translation="MGKLALAAKITHVPSMYLSELPGKNYGCRQAAIDGHIEIGKRCR
+ EMGVDTIIVFDTHWLVNSAYHINCADHFQGVYTSNELPHFIRDMTYDYDGNPELGHLI
+ ADEAVKLGVRAKAHNIPSLKLEYGTLVPMRYMNSDKHFKVVSISAFCTVHDFADSRKL
+ GEAIIKAIEKYDGTVAVFASGSLSHRFIDDQRAEEGMNSYTREFDHQMDERVVKLWRE
+ GKFKEFCTMLPEYADYCYGEGNMHDTVMLLGMLGWDKYDGKVEFITDLFASSGTGQVN
+ AVFPLPA"
+ misc_feature complement(1824512..1825348)
+ /locus_tag="SARI_01899"
+ /note="The Class III extradiol dioxygenase,
+ homoprotocatechuate 2,3-dioxygenase, catalyzes the key
+ ring cleavage step in the metabolism of
+ homoprotocatechuate; Region: HPCD; cd07370"
+ /db_xref="CDD:153382"
+ misc_feature complement(1824515..1825324)
+ /locus_tag="SARI_01899"
+ /note="Catalytic LigB subunit of aromatic ring-opening
+ dioxygenase; Region: LigB; pfam02900"
+ /db_xref="CDD:217276"
+ misc_feature complement(order(1824539..1824544,1824635..1824637,
+ 1824800..1824802,1824980..1824982,1825184..1825186,
+ 1825313..1825321))
+ /locus_tag="SARI_01899"
+ /note="putative active site [active]"
+ /db_xref="CDD:153382"
+ misc_feature complement(order(1825184..1825186,1825319..1825321))
+ /locus_tag="SARI_01899"
+ /note="putative metal binding site [ion binding]; other
+ site"
+ /db_xref="CDD:153382"
+ gene complement(1825356..1826822)
+ /locus_tag="SARI_01900"
+ CDS complement(1825356..1826822)
+ /locus_tag="SARI_01900"
+ /inference="protein motif:HMMPfam:IPR002086"
+ /inference="protein motif:HMMPIR:IPR012303"
+ /inference="protein motif:HMMTigr:IPR011985"
+ /inference="protein motif:ScanRegExp:IPR002086"
+ /inference="similar to AA sequence:REFSEQ:NP_460075.1"
+ /note="'KEGG: stm:STM1102 7.4e-262 hpaE;
+ 4-hydroxyphenylacetate catabolism K00151;
+ COG: COG1012 NAD-dependent aldehyde dehydrogenases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570925.1"
+ /db_xref="GI:161503813"
+ /db_xref="InterPro:IPR002086"
+ /db_xref="InterPro:IPR011985"
+ /db_xref="InterPro:IPR012303"
+ /translation="MKKINHWINGKNVAGNDYFQTTNPATGDVLAEVASGGEAEVNQA
+ VAAAKDAFPKWANLPMKERARLMRRLGDLIDQNVPEIAAMETADTGLPIHQTKNVLIP
+ RASHNFEFFAEVCQQMNGKTYPVDDKMLNYTLVQPVGVCALVSPWNVPFMTATWKVAP
+ CLALGNTAVLKMSELSPLTADRLGELALEAGIPAGVLNVVQGYGATAGDALVRHHDVR
+ AVSFTGGTATGRNIMKNAGLKKYSMELGGKSPVLIFDDADIERALDAALFTIFSINGE
+ RCTAGSRIFIQQSIYPEFVKRFAERANRLRVGDPTDPNTQVGALISQQHWEKVSGYIR
+ LGIEEGATLLAGGAEKPTDLPAHLKGGNFLRPTVLADVDNRMRVAQEEIFGPVACLLP
+ FKDEAEGLRLANDVEYGLASYIWTQDVSKVLRLARGIEAGMVFVNTQNVRDLRQPFGG
+ VKASGTGREGGEYSFEVFAEMKNVCISMGGHPIPKWGV"
+ misc_feature complement(1825362..1826813)
+ /locus_tag="SARI_01900"
+ /note="5-carboxymethyl-2-hydroxymuconate semialdehyde
+ dehydrogenase; Region: HpaE; TIGR02299"
+ /db_xref="CDD:131352"
+ misc_feature complement(1825395..1826762)
+ /locus_tag="SARI_01900"
+ /note="Human aldehyde dehydrogenase family 8 member
+ A1-like; Region: ALDH_F8_HMSADH; cd07093"
+ /db_xref="CDD:143412"
+ misc_feature complement(order(1825479..1825481,1825671..1825673,
+ 1825677..1825679,1825989..1825991,1826088..1826093,
+ 1826130..1826132,1826139..1826141,1826148..1826156,
+ 1826196..1826201,1826211..1826213,1826301..1826306,
+ 1826310..1826312,1826364..1826366,1826382..1826390))
+ /locus_tag="SARI_01900"
+ /note="NAD binding site [chemical binding]; other site"
+ /db_xref="CDD:143412"
+ misc_feature complement(order(1825989..1825991,1825998..1826000,
+ 1826091..1826093,1826379..1826381))
+ /locus_tag="SARI_01900"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:143412"
+ gene complement(1826819..1828108)
+ /locus_tag="SARI_01901"
+ CDS complement(1826819..1828108)
+ /locus_tag="SARI_01901"
+ /inference="protein motif:HMMPfam:IPR002529"
+ /inference="protein motif:HMMTigr:IPR012684"
+ /inference="protein motif:HMMTigr:IPR012686"
+ /inference="similar to AA sequence:REFSEQ:NP_460074.1"
+ /note="'KEGG: stm:STM1101 9.9e-228 hpaG; putative
+ bifunctional enzyme
+ 2-hydroxyhepta-2,4-diene-1,7-dioatesomerase /
+ 5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioatedecarboxylase
+ protein K05921;
+ COG: COG0179 2-keto-4-pentenoate
+ hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase
+ (catechol pathway);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570926.1"
+ /db_xref="GI:161503814"
+ /db_xref="InterPro:IPR002529"
+ /db_xref="InterPro:IPR012684"
+ /db_xref="InterPro:IPR012686"
+ /translation="MKGTVFAVALNHRSQLDAWREAFSQPPYNAPPKTAVWFIKPRNT
+ VIRHGEPIPYPQGEKVLSGATVALIVGKTASRVRPEAAADYIAGYALANEVSLPEESF
+ YRPAIKAKCRDGFCPLGEMAPLSDVDNLTIITEINGREADHWNTDDLQRSAAQLLSAL
+ SEFATLNPGDAILLGTPQNRVALRPGDRVRILAKGLPALENPVVAEDEFARHQTFTWP
+ LSATGTLFALGLNYADHASELAFTPPKEPLVFIKAPNTFTGHNQTSVRPDNVEYMHYE
+ AELVVVIGKTARKVSEAEAMEYVAGYTVCNDYAIRDYLENYYRPNLRVKSRDGLTPIG
+ PWIVDKEAISDPHNLTLRTFVNGELRQEGTTADLIFSIPFLIAYLSEFMTLQPGDMIA
+ TGTPKGLSDVVPGDEVVVEVEGVGRLVNRIVSEESAK"
+ misc_feature complement(1826822..1828108)
+ /locus_tag="SARI_01901"
+ /note="4-hydroxyphenylacetate degradation bifunctional
+ isomerase/decarboxylase; Provisional; Region: PRK15203"
+ /db_xref="CDD:185125"
+ misc_feature complement(1827500..1828102)
+ /locus_tag="SARI_01901"
+ /note="Fumarylacetoacetate (FAA) hydrolase family; Region:
+ FAA_hydrolase; cl11421"
+ /db_xref="CDD:245608"
+ misc_feature complement(1826915..1827439)
+ /locus_tag="SARI_01901"
+ /note="Fumarylacetoacetate (FAA) hydrolase family; Region:
+ FAA_hydrolase; pfam01557"
+ /db_xref="CDD:216570"
+ gene 1828213..1828398
+ /locus_tag="SARI_01902"
+ CDS 1828213..1828398
+ /locus_tag="SARI_01902"
+ /note="'Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570927.1"
+ /db_xref="GI:161503815"
+ /translation="MMRLTIFSQIYFKIYKYQIINKKPLFLINSNRKTGFIVNIGIHD
+ YSGINNSAKENRLCMIH"
+ gene 1828383..1828823
+ /locus_tag="SARI_01903"
+ CDS 1828383..1828823
+ /locus_tag="SARI_01903"
+ /inference="protein motif:FPrintScan:IPR000835"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000835"
+ /inference="protein motif:HMMSmart:IPR000835"
+ /inference="protein motif:HMMTigr:IPR012712"
+ /inference="protein motif:ScanRegExp:IPR000835"
+ /inference="similar to AA sequence:REFSEQ:NP_460073.1"
+ /note="'COG: COG1846 Transcriptional regulators;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570928.1"
+ /db_xref="GI:161503816"
+ /db_xref="InterPro:IPR000835"
+ /db_xref="InterPro:IPR011991"
+ /db_xref="InterPro:IPR012712"
+ /translation="MHDSLTIALLQAREAAMTYFRPIVKSHNLTDQQWRIVRILADSP
+ SMDFHDLAFRTCILRPSLTGILTRMERDGLVLRLKPVNDQRKLYVMLTEQGQTLYARA
+ RTQVEEAYRKIEADFTPEKTQKLMLLLDDLIALGRQHPDGDEEA"
+ misc_feature 1828392..1828745
+ /locus_tag="SARI_01903"
+ /note="homoprotocatechuate degradation operon regulator,
+ HpaR; Region: HpaR; TIGR02337"
+ /db_xref="CDD:188209"
+ misc_feature 1828449..1828745
+ /locus_tag="SARI_01903"
+ /note="helix_turn_helix multiple antibiotic resistance
+ protein; Region: HTH_MARR; smart00347"
+ /db_xref="CDD:197670"
+ gene 1829041..1830603
+ /locus_tag="SARI_01904"
+ CDS 1829041..1830603
+ /locus_tag="SARI_01904"
+ /inference="protein motif:HMMPfam:IPR004925"
+ /inference="protein motif:HMMTigr:IPR012688"
+ /inference="protein motif:superfamily:IPR009100"
+ /inference="similar to AA sequence:REFSEQ:NP_460072.1"
+ /note="'KEGG: stm:STM1099 1.0e-287 hpaB;
+ 4-hydroxyphenylacetate catabolism K00483;
+ COG: COG2368 Aromatic ring hydroxylase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570929.1"
+ /db_xref="GI:161503817"
+ /db_xref="InterPro:IPR004925"
+ /db_xref="InterPro:IPR009100"
+ /db_xref="InterPro:IPR012688"
+ /translation="MKPEDFRTDNKRPLTGEEYLKSLQDGREIYIYGERVKDVTTHPA
+ FRNAAASVAQLYDALHKPAMQDTLCWNTDTGSGGYTHKFFRVAKSADDLRQQRDAIAE
+ WSRLSYGWMGRTPDYKAAFGCALGANPAFYGQFEQNARNWYTRIQETGLYFNHAIVNP
+ PIDRHKPADEVKDVYIKLEKETDAGIIVSGAKVVATNSALTHYNMIGFGSAQVMGENP
+ DFALMFVAPMDAEGVKLISRASYEMVAGATGSPFDYPLSSRFDENDAILVMDKVLIPW
+ ENVLIYRDFDRCRRWTMEGGFARMYPLQACVRLAVKLDFITALLKKSLECTGTVEFRG
+ VQADLGEVVAWRNMFWALSDSMCSEATPWVNGAWLPDHAALQTYRVMAPMAYAKIKNI
+ IERNVTSGLIYLPSSARDLNNPQIDQYLAKYVRGSNGMDHVERIKILKLMWDAIGSEF
+ GGRHELYEINYSGSQDEIRLQCLRQAQSSGNMDKMMAMVDRCLSEYDQNGWTVSHLHN
+ NDDINQLDKLLK"
+ misc_feature 1829044..1830600
+ /locus_tag="SARI_01904"
+ /note="4-hydroxyphenylacetate 3-monooxygenase, oxygenase
+ component; Region: HpaB-2; TIGR02310"
+ /db_xref="CDD:213700"
+ misc_feature 1829896..1830513
+ /locus_tag="SARI_01904"
+ /note="4-hydroxyphenylacetate 3-hydroxylase C terminal;
+ Region: HpaB; pfam03241"
+ /db_xref="CDD:217448"
+ gene 1830621..1831133
+ /locus_tag="SARI_01905"
+ CDS 1830621..1831133
+ /locus_tag="SARI_01905"
+ /inference="protein motif:Gene3D:IPR002563"
+ /inference="protein motif:HMMPfam:IPR002563"
+ /inference="protein motif:HMMTigr:IPR011982"
+ /inference="protein motif:superfamily:IPR009002"
+ /inference="similar to AA sequence:INSD:AAL20030.1"
+ /note="'KEGG: spt:SPA1752 5.8e-88 hpaC;
+ 4-hydroxyphenylacetate 3-monooxygenase coupling protein
+ K00484;
+ COG: COG1853 Conserved protein/domain typically associated
+ with flavoprotein oxygenases, DIM6/NTAB family;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570930.1"
+ /db_xref="GI:161503818"
+ /db_xref="InterPro:IPR002563"
+ /db_xref="InterPro:IPR009002"
+ /db_xref="InterPro:IPR011982"
+ /translation="MQVDEQRLRFRDAMASLAAAVNIVTTAGHAGRCGITATAVCSVT
+ DTPPSVMVCINANSAMNPVFQGNGRLCINVLNHEQELMARHFAGMTGMAMEDRFHQPC
+ WQSGPLGQPVLNGALAGLEGEISDVQTIGTHLVYLVAIKNIILSQDGHGLIYFKRRFH
+ PVRLEMEAPV"
+ misc_feature 1830621..1831130
+ /locus_tag="SARI_01905"
+ /note="4-hydroxyphenylacetate 3-monooxygenase reductase
+ subunit; Provisional; Region: hpaC; PRK15486"
+ /db_xref="CDD:185383"
+ gene complement(1831256..1831666)
+ /locus_tag="SARI_01906"
+ CDS complement(1831256..1831666)
+ /locus_tag="SARI_01906"
+ /inference="protein motif:BlastProDom:IPR000895"
+ /inference="protein motif:FPrintScan:IPR000895"
+ /inference="protein motif:Gene3D:IPR000895"
+ /inference="protein motif:HMMPfam:IPR000895"
+ /inference="protein motif:HMMSmart:IPR000895"
+ /inference="protein motif:ScanRegExp:IPR000895"
+ /inference="similar to AA sequence:REFSEQ:YP_150984.1"
+ /note="'KEGG: gbe:GbCGDNIH1_1243 2.7e-12 urate oxidase
+ K00365;
+ COG: COG2351 Transthyretin-like protein;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570931.1"
+ /db_xref="GI:161503819"
+ /db_xref="InterPro:IPR000895"
+ /translation="MKRYILASAIASLVAAPAMALAAGNNILSVHILDQQTGKPAPGV
+ EVVLEQKKDNGWAQLNTGHTDQDGRIKALWPEKPAAPGDYRVVFKTGHYFESKKLDTF
+ FPEIPVEFHISKTNEHYHVPLLLSQYGYSTYRGS"
+ misc_feature complement(1831259..1831591)
+ /locus_tag="SARI_01906"
+ /note="HIUase (5-hydroxyisourate hydrolase) catalyzes the
+ second step in a three-step ureide pathway in which
+ 5-hydroxyisourate (HIU), a product of the uricase (urate
+ oxidase) reaction, is hydrolyzed to
+ 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU);
+ Region: TLP_HIUase; cd05822"
+ /db_xref="CDD:100114"
+ misc_feature complement(order(1831268..1831270,1831295..1831297,
+ 1831301..1831303,1831307..1831309,1831460..1831462,
+ 1831568..1831570,1831574..1831576))
+ /locus_tag="SARI_01906"
+ /note="active site"
+ /db_xref="CDD:100114"
+ misc_feature complement(order(1831265..1831285,1831289..1831291,
+ 1831334..1831342,1831352..1831354,1831358..1831363,
+ 1831553..1831564))
+ /locus_tag="SARI_01906"
+ /note="homotetramer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:100114"
+ gene 1831803..1832483
+ /locus_tag="SARI_01907"
+ CDS 1831803..1832483
+ /locus_tag="SARI_01907"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:BlastProDom:IPR001867"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR001789"
+ /inference="protein motif:HMMPfam:IPR001867"
+ /inference="protein motif:HMMSmart:IPR001789"
+ /inference="protein motif:HMMTigr:IPR006291"
+ /inference="protein motif:superfamily:IPR011006"
+ /inference="similar to AA sequence:REFSEQ:YP_150985.1"
+ /note="induced by CusR in the presence of copper; YedW
+ induces the expression of the upstream gene yedV (encoding
+ a sensor kinase) as well as yedW; yedVW is one of four
+ copper regulons found in E. coli; part of the copper
+ homeostasis mechanism; confers resistance to copper and
+ several drugs when induced"
+ /codon_start=1
+ /transl_table=11
+ /product="transcriptional regulatory protein YedW"
+ /protein_id="YP_001570932.1"
+ /db_xref="GI:161503820"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR001867"
+ /db_xref="InterPro:IPR006291"
+ /db_xref="InterPro:IPR011006"
+ /db_xref="InterPro:IPR011991"
+ /translation="MKILLIEDNQKTIEWVRQGLTEAGYVVDYACDGRDGLHLALREH
+ YSLIILDIMLPGLDGWQVLRALRTAHQTPVIYLTARDSVEDRVKGLEAGANDYLVKPF
+ SFAELLARVRAQLRQHVSVFTRLSINGLDMDATRQSVSRNKKPISLTRKEFLLLWLLA
+ SRAGEIVPRTAIASEVWGINFDSETNTVDVAIRRLRAKVDDPFEKKLITTVRGMGYRL
+ QAEASQNG"
+ misc_feature 1831803..1832471
+ /locus_tag="SARI_01907"
+ /note="transcriptional regulatory protein YedW;
+ Provisional; Region: PRK11517"
+ /db_xref="CDD:183172"
+ misc_feature 1831812..1832147
+ /locus_tag="SARI_01907"
+ /note="Signal receiver domain; originally thought to be
+ unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
+ recently identified in eukaroytes ETR1 Arabidopsis
+ thaliana; this domain receives the signal from the sensor
+ partner in a two-component systems; Region: REC; cd00156"
+ /db_xref="CDD:238088"
+ misc_feature order(1831821..1831826,1831953..1831955,1831977..1831979,
+ 1832034..1832036,1832091..1832093,1832100..1832105)
+ /locus_tag="SARI_01907"
+ /note="active site"
+ /db_xref="CDD:238088"
+ misc_feature 1831953..1831955
+ /locus_tag="SARI_01907"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238088"
+ misc_feature order(1831962..1831967,1831971..1831979)
+ /locus_tag="SARI_01907"
+ /note="intermolecular recognition site; other site"
+ /db_xref="CDD:238088"
+ misc_feature 1832100..1832108
+ /locus_tag="SARI_01907"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238088"
+ misc_feature 1832175..1832456
+ /locus_tag="SARI_01907"
+ /note="Effector domain of response regulator. Bacteria and
+ certain eukaryotes like protozoa and higher plants use
+ two-component signal transduction systems to detect and
+ respond to changes in the environment. The system consists
+ of a sensor histidine kinase and...; Region: trans_reg_C;
+ cd00383"
+ /db_xref="CDD:238225"
+ misc_feature order(1832247..1832249,1832304..1832309,1832361..1832363,
+ 1832370..1832372,1832394..1832399,1832430..1832432,
+ 1832445..1832447)
+ /locus_tag="SARI_01907"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:238225"
+ gene 1832476..1833834
+ /locus_tag="SARI_01908"
+ CDS 1832476..1833834
+ /locus_tag="SARI_01908"
+ /inference="protein motif:Gene3D:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003660"
+ /inference="protein motif:HMMPfam:IPR003661"
+ /inference="protein motif:HMMSmart:IPR003594"
+ /inference="protein motif:HMMSmart:IPR003661"
+ /inference="protein motif:HMMTigr:IPR006290"
+ /inference="protein motif:superfamily:IPR003594"
+ /inference="protein motif:superfamily:IPR009082"
+ /inference="similar to AA sequence:INSD:CAD08221.1"
+ /note="'KEGG: sty:STY1127 5.1e-215 copS; histidine kinase
+ K07644;
+ COG: COG0642 Signal transduction histidine kinase;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570933.1"
+ /db_xref="GI:161503821"
+ /db_xref="InterPro:IPR003594"
+ /db_xref="InterPro:IPR003660"
+ /db_xref="InterPro:IPR003661"
+ /db_xref="InterPro:IPR006290"
+ /db_xref="InterPro:IPR009082"
+ /translation="MVKLSMTLRLTISFIAILILACTGISWTLYRALSKELTYRDDMT
+ LINRAAQMQQLLLDGARPENLPLYFNRMVDTKQDILLIHSPTGHSVAINHSGIPNERL
+ NMIPLAKNITRETLFRQTVRGTELTAVRVIGRSGDYPLTLTIARLATERRQMLEQYRH
+ NSLLISLIAIIVCSALSPLVIRNGLRAITSLSRLTAATDSGTLRQPLAEQALPVELRP
+ LGQALNIMRQKLSDDFGRLNQFADDLAHELRTPVNILLGKNQVMLSQERSIEEYQQAL
+ VDNIEELEGLSRLTENILFLARVEHQNIAVKKQPVPLNALVENMLDYLSPLAEEKRIR
+ FISQCQGTVWADKILLQRVLSNLLTNAIRYSDENAVIRIESAYDNNAAEIRVANPGNP
+ AADPGKLFRRFWRGDNARHTTGFGLGLSLVNAIAMLHGGSASYLYADKHNIFSVRLPD
+ NG"
+ misc_feature 1832482..1833822
+ /locus_tag="SARI_01908"
+ /note="heavy metal sensor kinase; Region: cztS_silS_copS;
+ TIGR01386"
+ /db_xref="CDD:233391"
+ misc_feature 1832959..1833171
+ /locus_tag="SARI_01908"
+ /note="HAMP domain; Region: HAMP; pfam00672"
+ /db_xref="CDD:216054"
+ misc_feature 1833181..1833369
+ /locus_tag="SARI_01908"
+ /note="Histidine Kinase A (dimerization/phosphoacceptor)
+ domain; Histidine Kinase A dimers are formed through
+ parallel association of 2 domains creating 4-helix
+ bundles; usually these domains contain a conserved His
+ residue and are activated via...; Region: HisKA; cd00082"
+ /db_xref="CDD:119399"
+ misc_feature order(1833193..1833195,1833205..1833207,1833217..1833219,
+ 1833226..1833228,1833238..1833240,1833247..1833249,
+ 1833298..1833300,1833310..1833312,1833319..1833321,
+ 1833331..1833333,1833340..1833342,1833352..1833354)
+ /locus_tag="SARI_01908"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119399"
+ misc_feature 1833211..1833213
+ /locus_tag="SARI_01908"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:119399"
+ misc_feature 1833523..1833819
+ /locus_tag="SARI_01908"
+ /note="Histidine kinase-like ATPases; This family includes
+ several ATP-binding proteins for example: histidine
+ kinase, DNA gyrase B, topoisomerases, heat shock protein
+ HSP90, phytochrome-like ATPases and DNA mismatch repair
+ proteins; Region: HATPase_c; cd00075"
+ /db_xref="CDD:238030"
+ misc_feature order(1833541..1833543,1833553..1833555,1833562..1833564,
+ 1833631..1833633,1833637..1833639,1833643..1833645,
+ 1833721..1833732,1833778..1833780,1833784..1833786,
+ 1833796..1833801,1833805..1833807)
+ /locus_tag="SARI_01908"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature 1833553..1833555
+ /locus_tag="SARI_01908"
+ /note="Mg2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature order(1833643..1833645,1833721..1833723,1833727..1833729)
+ /locus_tag="SARI_01908"
+ /note="G-X-G motif; other site"
+ /db_xref="CDD:238030"
+ gene 1834012..1835481
+ /locus_tag="SARI_01909"
+ CDS 1834012..1835481
+ /locus_tag="SARI_01909"
+ /inference="protein motif:HMMPfam:IPR005322"
+ /inference="similar to AA sequence:REFSEQ:NP_460067.1"
+ /note="'KEGG: lsa:LSA0897 1.2e-73 pepD5; dipeptidase
+ D-type (U34 family) K01274;
+ COG: COG4690 Dipeptidase;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570934.1"
+ /db_xref="GI:161503822"
+ /db_xref="InterPro:IPR005322"
+ /translation="MKLYFAFAVTLLGLGKVIACTTLLVGNQASADGSFIIARNEDGS
+ ANNAKHMVIHPISFHQQGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNS
+ AGVGMSATETIYNGSAALAADPYVTKTGITEDAIQTVILPVAHSARQGAKLLGDIIEQ
+ KGAGEGFGVAFIDTKEIWYLETGSGHQWLAVRLPADKYFVSANQGRLRRYDPNDKANY
+ MASPTLVSFAKKQGLYDPAHGEFDFHQAYSQDNKIDITYNYPRVWTLQHRFNPHLDTA
+ VSKGETFPVFLTPMTKINLEAIKNALRNHYQGTPHDPYANHHPQEPWRPISVFRTQES
+ HILQVRPGLPQAVGEVEYVAYGMPSLSVYLPYYQGMRHYQPGYDKGTDRASSDSTYWT
+ FRTLQTLVMQDYNAFAPDVQHAWKTFEQQTAKQQHTMEQTYLRLYASHPKEAQHLLQN
+ FEDKTMQNAQTLAHRLTNNIITKMTYNTDMKYHFSGTQP"
+ misc_feature 1834066..1835466
+ /locus_tag="SARI_01909"
+ /note="Dipeptidase [Amino acid transport and metabolism];
+ Region: PepD; COG4690"
+ /db_xref="CDD:227034"
+ gene 1836202..1837887
+ /locus_tag="SARI_01910"
+ CDS 1836202..1837887
+ /locus_tag="SARI_01910"
+ /inference="protein motif:HMMPfam:IPR008108"
+ /inference="similar to AA sequence:REFSEQ:YP_150989.1"
+ /note="'COG: NOG06178 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570935.1"
+ /db_xref="GI:161503823"
+ /db_xref="InterPro:IPR008108"
+ /translation="MQIQSFYHSALLKSQEAFKSLQKTLYNGMQILSGQGKAPAKAPD
+ ARPEIIVLREPGATWGNYLQNQKTSNHSLHHIYDLQRDLLTVTATVLGKQDPVLMAMA
+ NQMELAKVKADRPATKQEEAAAKTLKKNLIELIAARTQQQNGLPAKEAHRLAAEMFKD
+ AQVKQLNSQSWQTIKNTLIHNGHHYTNTQLPAADMKIDTKDIFPSAYQGKGVCSWDTQ
+ NIHHATNLWMSTVSTHEDGKDKTLFCGIRHGVLSPYGVKDPLLRQVGAENRAKEVLTA
+ ALFSKPELLESALKGEAVSLKLVSVGLLTASNVLGQEGTMVEDQMRAWQSLTQPGKMI
+ HLKIRNKDGELQTVKIKPEVAAFNVGVNELALKLGFGLKASDRYNIEALHQLLGNDLR
+ PEARPGGWVGNWLAQYPDNYEVVNKLARQIKDIWKNNLHHKDGGEPYKLAQRLAMLAN
+ EIDAVPAWNCKSGKDRTGMMDSEIKREVISFHQTHTLNAPGNLPDRSGQEIFQKVLLN
+ SGNLEIQKLNTGGAGNKVMKNLSPEVLNLSYQKRIGNENIWQSVKGISSLITS"
+ misc_feature 1836202..1837884
+ /locus_tag="SARI_01910"
+ /note="inositol phosphate phosphatase SopB; Provisional;
+ Region: PRK15378"
+ /db_xref="CDD:237953"
+ misc_feature 1836202..1837878
+ /locus_tag="SARI_01910"
+ /note="Enterobacterial virulence protein IpgD; Region:
+ IpgD; pfam05925"
+ /db_xref="CDD:147852"
+ gene 1837903..1838244
+ /locus_tag="SARI_01911"
+ CDS 1837903..1838244
+ /locus_tag="SARI_01911"
+ /inference="protein motif:HMMPfam:IPR013095"
+ /inference="similar to AA sequence:INSD:AAL20022.1"
+ /note="'COG: NOG09749 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570936.1"
+ /db_xref="GI:161503824"
+ /db_xref="InterPro:IPR013095"
+ /translation="MENLLNRLYDALGLDAPEDEPLLIIDDEIQVYFNESDLMLEMCC
+ PFMPFPDDLLTLQHFLRLNYTSPVTIGADADNTALVALYRLPQTSTEEEALTGFELFI
+ SSVKKFIEHYT"
+ misc_feature 1837903..1838241
+ /locus_tag="SARI_01911"
+ /note="type III secretion chaperone protein SigE;
+ Provisional; Region: PRK15202"
+ /db_xref="CDD:237922"
+ gene complement(1838492..1838899)
+ /locus_tag="SARI_01912"
+ CDS complement(1838492..1838899)
+ /locus_tag="SARI_01912"
+ /note="'Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570937.1"
+ /db_xref="GI:161503825"
+ /translation="MKYQKLLAGMMVITVMMMTGCSTFNPVQLRQHQLERNYTYYLLD
+ PPLYEGDVVQYKCKDGSQDTVTIQKVTPQSLITSTDQVIPLADLTSLEKKDISKGKTA
+ AAVGAGVGVTAVAIAAIFAATLSAGLAAMIVNG"
+ gene 1840925..1841842
+ /locus_tag="SARI_01913"
+ CDS 1840925..1841842
+ /locus_tag="SARI_01913"
+ /inference="protein motif:HMMPfam:IPR009977"
+ /inference="similar to AA sequence:INSD:AAO70247.1"
+ /note="'COG: NOG11449 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570938.1"
+ /db_xref="GI:161503826"
+ /db_xref="InterPro:IPR009977"
+ /translation="MKIQELFLNIQHIKRKLTHWETSSFPIYRDTFEQYGGSVNMHPD
+ IVEYFMKYHDWKFSFFHYKKYDEIKGAYFVCNNQNIGILMRRAFPLSSDEVLIPLAPE
+ LRCFLPERTNKLSVYHRSQIINATWRLARKKQNCLVKDTFSTKFGKNRRNEYQKFLRN
+ GGNVKSLDDFSGDELVWIYQSLFRSRFGDTLPCYPTGNLTDFFSRLRHLLYGCVLYVE
+ NSPCAFDIVLKAESRLNVYFDVPNGGVKKECMNLSPGSILMWLNVNNAKSYCQAKNKK
+ FIFSIGALRPEWEYKLRWAEPFFTGKSFC"
+ misc_feature 1840946..1841839
+ /locus_tag="SARI_01913"
+ /note="antimicrobial resistance protein Mig-14;
+ Provisional; Region: PRK15312"
+ /db_xref="CDD:185212"
+ misc_feature 1841357..1841797
+ /locus_tag="SARI_01913"
+ /note="Acetyltransferase (GNAT) domain; Region:
+ Acetyltransf_6; cl17497"
+ /db_xref="CDD:248051"
+ gene complement(1842652..1842855)
+ /locus_tag="SARI_01914"
+ CDS complement(1842652..1842855)
+ /locus_tag="SARI_01914"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570939.1"
+ /db_xref="GI:161503827"
+ /translation="MKGIKRKGYENLYLIEFEPAPQNIDETKSLVQQNQKQGLTAEAD
+ SMPYDPLREFIITASRVSLETPR"
+ gene 1843494..1844597
+ /locus_tag="SARI_01915"
+ CDS 1843494..1844597
+ /locus_tag="SARI_01915"
+ /note="'COG: KOG2893 Zn finger protein;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570940.1"
+ /db_xref="GI:161503828"
+ /translation="MLMNIIHNSIKLRSIMFKSIHNNGSSNIVFDMVKKDVIGCMDDV
+ AEYREKIKQLSEVSLQFSQLFFHFEDFCKKNNILIFCHSEEELAQCFANENPQYTFSE
+ SFNYISRTHSYGFTALTENRIYSISGARGKHGANHEMMHLLSAPGGKTKMLLQISANM
+ MEGTNEFFTREVEKYMSVIEPEITEAYSFTYPKQYEFITTIINVCGETVKNALYQIHF
+ CGEDTDCLIDAMLLQWKQKSVMGNMKPVYKTPPNETQAKNFLKRFLIEITSNMDGESD
+ NSIALTGFHKRFPTPEPEIPPPPPLPPLPGAPRPLPVAPPILPGAPPPLPGEPQILDA
+ IDAGFNEEEAYNIFKLQMMDFLHLVPPPPPLLF"
+ gene complement(1844359..1844481)
+ /locus_tag="SARI_01916"
+ CDS complement(1844359..1844481)
+ /locus_tag="SARI_01916"
+ /note="'Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570941.1"
+ /db_xref="GI:161503829"
+ /translation="MAHQVMAVAHQVISVAQQVTVVAHQVMVVVVEAGVSLVQV"
+ gene complement(1844819..1845079)
+ /locus_tag="SARI_01917"
+ CDS complement(1844819..1845079)
+ /locus_tag="SARI_01917"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570942.1"
+ /db_xref="GI:161503830"
+ /translation="METAIILVFVQRPSITLGSGLYPEITHLANEAREPDFFNLLSAI
+ RNVGNEDMIERAGWILYPGFFSLYGCDNFLRNHSLVRILISV"
+ gene 1845353..1846234
+ /locus_tag="SARI_01918"
+ CDS 1845353..1846234
+ /locus_tag="SARI_01918"
+ /inference="protein motif:HMMPfam:IPR001646"
+ /inference="similar to AA sequence:INSD:CAD08215.1"
+ /note="'KEGG: ana:alr3268 9.2e-08 serine/threonine kinase
+ K08884;
+ COG: COG1357 Uncharacterized low-complexity proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570943.1"
+ /db_xref="GI:161503831"
+ /db_xref="InterPro:IPR001646"
+ /translation="MPITQATPEKVAKYLCAAGVGTKEAMENATSPQGICEWIVNFFT
+ CGRVKRNNEKCFREVVEKLTTALLHVNKDDFYSGAKIFLEDINGCVTSFSYGEVFESS
+ SPMVTVEVSKNGKTVTRTIVAKTFLDACRMLKLMNKYNIQPQEDSALLTDEGKLDLRG
+ ANLTHKDFNGEDLSHIDASNADFRGSNLSDVNLIGANLCCANLHAVNLMGSNMTRANL
+ THADLTYANMSSVNLTAAILFSSDFTSTNLNSAILDKIALTLAKSLTGANLTGIQHTP
+ TPLLDYNDETPFPRLIF"
+ misc_feature 1845353..1846231
+ /locus_tag="SARI_01918"
+ /note="secreted effector protein PipB; Provisional;
+ Region: PRK15197"
+ /db_xref="CDD:185119"
+ misc_feature 1845821..1845937
+ /locus_tag="SARI_01918"
+ /note="Pentapeptide repeats (8 copies); Region:
+ Pentapeptide; pfam00805"
+ /db_xref="CDD:109845"
+ misc_feature 1845953..1846066
+ /locus_tag="SARI_01918"
+ /note="Pentapeptide repeats (8 copies); Region:
+ Pentapeptide; pfam00805"
+ /db_xref="CDD:109845"
+ gene complement(1846526..1846876)
+ /locus_tag="SARI_01919"
+ CDS complement(1846526..1846876)
+ /locus_tag="SARI_01919"
+ /inference="protein motif:Gene3D:IPR012335"
+ /inference="protein motif:HMMPfam:IPR006660"
+ /inference="protein motif:superfamily:IPR012336"
+ /inference="similar to AA sequence:REFSEQ:ZP_00829952.1"
+ /note="'KEGG: ecc:c4301 1.6e-44 arsC; arsenate reductase
+ K00537;
+ COG: COG1393 Arsenate reductase and related proteins,
+ glutaredoxin family;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570944.1"
+ /db_xref="GI:161503832"
+ /db_xref="InterPro:IPR006660"
+ /db_xref="InterPro:IPR012335"
+ /db_xref="InterPro:IPR012336"
+ /translation="MIRNSGNEPTIIYYLDTPPTHNELVKLITDMRITVRALLRKNVE
+ PYEKLVLADDKFTDEQLISFMIENPILINRPIVVTSVGTRLCRPSEVVLDIIPDSQKD
+ VFTKAEGEQVVDEK"
+ misc_feature complement(1846592..1846876)
+ /locus_tag="SARI_01919"
+ /note="Arsenate Reductase (ArsC) family, ArsC subfamily;
+ arsenic reductases similar to that encoded by arsC on the
+ R733 plasmid of Escherichia coli. E. coli ArsC catalyzes
+ the reduction of arsenate [As(V)] to arsenite [As(III)],
+ the first step in the...; Region: ArsC_ArsC; cd03034"
+ /db_xref="CDD:239332"
+ misc_feature complement(order(1846616..1846618,1846655..1846657,
+ 1846757..1846759))
+ /locus_tag="SARI_01919"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:239332"
+ gene complement(1846949..1847380)
+ /locus_tag="SARI_01920"
+ CDS complement(1846949..1847380)
+ /locus_tag="SARI_01920"
+ /inference="protein motif:HMMPfam:IPR000802"
+ /inference="similar to AA sequence:REFSEQ:ZP_00829951.1"
+ /note="'KEGG: ecj:JW3469 7.3e-65 arsB; arsenite/antimonite
+ transporter K03893;
+ COG: COG1055 Na+/H+ antiporter NhaD and related arsenite
+ permeases;
+ Psort location: vesicles of secretory system, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570945.1"
+ /db_xref="GI:161503833"
+ /db_xref="InterPro:IPR000802"
+ /translation="MGMYLVVYGLRNAGLTEYLSGVLNMLVGKGLWAATFGTGFLTAF
+ LSSVMNNMPTVLVGALSVDGSTASGVIKEAMVYANVIGCDLGPKITPIGSLATLLWLH
+ VLSQKNMKITWGYYFRIGIVMTLPVLFVALAALVLRLSVTL"
+ misc_feature complement(1847009..>1847380)
+ /locus_tag="SARI_01920"
+ /note="Anion permease ArsB/NhaD. These permeases have
+ been shown to translocate sodium, arsenate, antimonite,
+ sulfate and organic anions across biological membranes in
+ all three kingdoms of life. A typical anion permease
+ contains 8-13 transmembrane helices...; Region:
+ ArsB_NhaD_permease; cl17221"
+ /db_xref="CDD:247775"
+ gene complement(1847583..1847939)
+ /locus_tag="SARI_01921"
+ CDS complement(1847583..1847939)
+ /locus_tag="SARI_01921"
+ /inference="protein motif:HMMPfam:IPR000802"
+ /inference="similar to AA sequence:INSD:ABP62861.1"
+ /note="'KEGG: ecj:JW3469 7.0e-44 arsB; arsenite/antimonite
+ transporter K03893;
+ COG: COG1055 Na+/H+ antiporter NhaD and related arsenite
+ permeases;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570946.1"
+ /db_xref="GI:161503834"
+ /db_xref="InterPro:IPR000802"
+ /translation="MLGAAVAALFANDGVALILTPIVIVMLPPLGFSKETTLAFVMAA
+ GFIADIASLPLVVSNLMNIVSADYFGLGFTQYASVMLPVDIAAIAATLVMLHMFFRRD
+ IPTTYDALLLKSSASR"
+ misc_feature complement(<1847601..>1847939)
+ /locus_tag="SARI_01921"
+ /note="Anion permease ArsB/NhaD. These permeases have
+ been shown to translocate sodium, arsenate, antimonite,
+ sulfate and organic anions across biological membranes in
+ all three kingdoms of life. A typical anion permease
+ contains 8-13 transmembrane helices...; Region:
+ ArsB_NhaD_permease; cl17221"
+ /db_xref="CDD:247775"
+ gene 1847960..1848298
+ /locus_tag="SARI_01922"
+ CDS 1847960..1848298
+ /locus_tag="SARI_01922"
+ /inference="protein motif:HMMPfam:IPR005025"
+ /inference="similar to AA sequence:REFSEQ:YP_049706.1"
+ /note="'KEGG: cyb:CYB_1452 0.0021 NADPH-dependent FMN
+ reductase K00299;
+ COG: COG0431 Predicted flavoprotein;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570947.1"
+ /db_xref="GI:161503835"
+ /db_xref="InterPro:IPR005025"
+ /translation="MTHARYPTGKRVVQPIQRNQTHHILGQWIRTFTIPNQSSEAKAW
+ QEFDENGRMKPSAWYARIVDVTEELFKVTLLLKGYTGYLAYRHSASKESHQPLPARIN
+ QEKSGIWNHR"
+ misc_feature <1848029..1848235
+ /locus_tag="SARI_01922"
+ /note="Flavodoxin-like fold; Region: Flavodoxin_2;
+ cl00438"
+ /db_xref="CDD:241863"
+ gene 1848207..1848350
+ /locus_tag="SARI_01923"
+ CDS 1848207..1848350
+ /locus_tag="SARI_01923"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570948.1"
+ /db_xref="GI:161503836"
+ /translation="MRIATAQAKKVISHCQLALTKKNLVSGITAKYVRTGLEMVFHQP
+ KAF"
+ gene complement(1848496..1848705)
+ /locus_tag="SARI_01924"
+ CDS complement(1848496..1848705)
+ /locus_tag="SARI_01924"
+ /note="'Psort location: extracellular, including cell
+ wall, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570949.1"
+ /db_xref="GI:161503837"
+ /translation="MVFTAVFIASSQKISGVLLSVTLRAASTGDALYQAERELMEHGY
+ YNIEHLSVCIAEDDSFLGIKIIDNS"
+ gene 1848942..1849148
+ /locus_tag="SARI_01925"
+ CDS 1848942..1849148
+ /locus_tag="SARI_01925"
+ /inference="similar to AA sequence:REFSEQ:YP_050336.1"
+ /note="'COG: NOG36091 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570950.1"
+ /db_xref="GI:161503838"
+ /translation="MKTCIDDIASFLHRIKVEAKPVVSEILEQLEKQAGQLPLDCQIY
+ PELVKLGVAKYREYNTAGGYRVLY"
+ gene complement(1850102..1850186)
+ /locus_tag="SARI_01926"
+ tRNA complement(1850102..1850186)
+ /locus_tag="SARI_01926"
+ /product="tRNA-Ser"
+ gene 1850590..1851249
+ /locus_tag="SARI_01927"
+ CDS 1850590..1851249
+ /locus_tag="SARI_01927"
+ /inference="protein motif:HMMPfam:IPR006214"
+ /inference="protein motif:ScanRegExp:IPR006213"
+ /inference="similar to AA sequence:INSD:AAV77682.1"
+ /note="'COG: COG0670 Integral membrane protein, interacts
+ with FtsH;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570951.1"
+ /db_xref="GI:161503839"
+ /db_xref="InterPro:IPR006213"
+ /db_xref="InterPro:IPR006214"
+ /translation="MDRIITSSRDRSSLLSTHKVLRNTYFLLSLTLAFSAITATASTV
+ LMLPSPGLILTLVGMYGLMFLTYKTANKPVGILSAFAFTGFLGYILGPILNAYLSAGM
+ GDVIGMALGGTALVFFCCSAYVLTTRKDMSFLGGMLMAGIVVVLIGMVANIFLQLSAL
+ HLAISAVFILISSGAILYETSNIIHGGETNYIRATVSLYVSLYNIFVSLLSILGFASR
+ D"
+ misc_feature 1850641..1851246
+ /locus_tag="SARI_01927"
+ /note="Integral membrane protein, interacts with FtsH
+ [General function prediction only]; Region: COG0670"
+ /db_xref="CDD:223742"
+ misc_feature 1850641..1851240
+ /locus_tag="SARI_01927"
+ /note="YccA-like proteins; Region: YccA_like; cd10433"
+ /db_xref="CDD:198415"
+ gene 1851336..1851665
+ /locus_tag="SARI_01928"
+ CDS 1851336..1851665
+ /locus_tag="SARI_01928"
+ /inference="protein motif:HMMPfam:IPR007453"
+ /inference="similar to AA sequence:SwissProt:Q7CQS8"
+ /note="transfers sulfur from TusBCD complex to MnmA;
+ involved in thiouridation of U34 position of some tRNAs"
+ /codon_start=1
+ /transl_table=11
+ /product="sulfur transfer protein TusE"
+ /protein_id="YP_001570952.1"
+ /db_xref="GI:161503840"
+ /db_xref="InterPro:IPR007453"
+ /translation="MLIFEGKEISTDSEGYLKETTQWSEPLAVAIAANEGIELSAEHW
+ EVVRFVREFYLEFNTSPAIRMLVKAMANKFGEEKGNSRYLYRLFPKGPAKQATKIAGL
+ PKPVKCI"
+ misc_feature 1851336..1851662
+ /locus_tag="SARI_01928"
+ /note="Dissimilatory sulfite reductase (desulfoviridin),
+ gamma subunit [Inorganic ion transport and metabolism];
+ Region: DsrC; COG2920"
+ /db_xref="CDD:225472"
+ misc_feature 1851336..1851662
+ /locus_tag="SARI_01928"
+ /note="sulfur transfer protein TusE; Provisional; Region:
+ PRK11508"
+ /db_xref="CDD:183167"
+ gene complement(1851662..1851943)
+ /locus_tag="SARI_01929"
+ CDS complement(1851662..1851943)
+ /locus_tag="SARI_01929"
+ /inference="protein motif:BlastProDom:IPR001792"
+ /inference="protein motif:FPrintScan:IPR001792"
+ /inference="protein motif:HMMPfam:IPR001792"
+ /inference="protein motif:ScanRegExp:IPR001792"
+ /inference="similar to AA sequence:REFSEQ:NP_455581.1"
+ /note="catalyzes the hydrolysis of acylphosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="acylphosphatase"
+ /protein_id="YP_001570953.1"
+ /db_xref="GI:161503841"
+ /db_xref="InterPro:IPR001792"
+ /translation="MSNVCTIAWIYGRVQGVGFRYTTQHEAQRLGLTGYAKNMDDGSV
+ EVVACGDEAQVEKLIKWLKEGGPRSARVDKILTEPHSPHETLTDFSIRY"
+ misc_feature complement(1851668..1851943)
+ /locus_tag="SARI_01929"
+ /note="acylphosphatase; Provisional; Region: PRK14426"
+ /db_xref="CDD:184675"
+ unsure 1852127..1852497
+ /note="Sequence derived from one plasmid subclone"
+ gene 1852416..1853627
+ /locus_tag="SARI_01930"
+ CDS 1852416..1853627
+ /locus_tag="SARI_01930"
+ /inference="protein motif:HMMPfam:IPR004398"
+ /inference="protein motif:HMMSmart:IPR002478"
+ /inference="similar to AA sequence:INSD:CAD08206.1"
+ /note="'KEGG: eci:UTI89_C1034 2.9e-196 yccW; hypothetical
+ protein YccW K06969;
+ COG: COG1092 Predicted SAM-dependent methyltransferases;
+ Psort location: vesicles of secretory system, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570954.1"
+ /db_xref="GI:161503842"
+ /db_xref="InterPro:IPR002478"
+ /db_xref="InterPro:IPR004398"
+ /translation="MTESTFPNYPRLVLSKGREKSLLRRHPWVFSGAVSRLEGKANPG
+ ETIDIVDHQGKWLARGAWSPASQIRARVWTFDKTEPVDIAFFTRRLRQAQHWRDWLAK
+ KDGLDSYRLIAGESDGLPGVTIDRFGHFLVLQLLSAGAEYQRAALISALQTCYPDCAI
+ YDRSDVAVRKKEGMALAQGPVTGELPPALLPIEEHGMKLLVDIQGGHKTGYYLDQRDS
+ RLATRRYVENQRVLNCFSYTGGFAVSALMGGCRQVVSVDTSQDALDIARQNVELNQLD
+ LSKAEFVRDDVFKLLRAYRERGEKFDVIIMDPPKFVENKSQLMGACRGYKDINMLAIQ
+ LLNPGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEG
+ LYLKGFACRVM"
+ misc_feature 1852440..1853624
+ /locus_tag="SARI_01930"
+ /note="23S rRNA m(5)C1962 methyltransferase; Provisional;
+ Region: PRK15128"
+ /db_xref="CDD:185082"
+ misc_feature 1852443..1852637
+ /locus_tag="SARI_01930"
+ /note="Putative RNA-binding Domain in PseudoUridine
+ synthase and Archaeosine transglycosylase; Region: PUA;
+ smart00359"
+ /db_xref="CDD:214635"
+ misc_feature 1852665..1852964
+ /locus_tag="SARI_01930"
+ /note="Middle domain of the SAM-dependent
+ methyltransferase RlmI and related proteins; Region:
+ RlmI_M_like; cd11572"
+ /db_xref="CDD:211413"
+ misc_feature order(1852743..1852745,1852815..1852817)
+ /locus_tag="SARI_01930"
+ /note="putative RNA binding site [nucleotide binding];
+ other site"
+ /db_xref="CDD:211413"
+ misc_feature 1853103..1853447
+ /locus_tag="SARI_01930"
+ /note="S-adenosylmethionine-dependent methyltransferases
+ (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
+ that use S-adenosyl-L-methionine (SAM or AdoMet) as a
+ substrate for methyltransfer, creating the product
+ S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
+ cd02440"
+ /db_xref="CDD:100107"
+ misc_feature order(1853115..1853135,1853184..1853189,1853268..1853276,
+ 1853334..1853336)
+ /locus_tag="SARI_01930"
+ /note="S-adenosylmethionine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:100107"
+ gene 1853685..1854002
+ /locus_tag="SARI_01931"
+ CDS 1853685..1854002
+ /locus_tag="SARI_01931"
+ /inference="protein motif:HMMTigr:IPR011722"
+ /inference="similar to AA sequence:REFSEQ:YP_150999.1"
+ /note="'COG: COG3785 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="heat shock protein HspQ"
+ /protein_id="YP_001570955.1"
+ /db_xref="GI:161503843"
+ /db_xref="InterPro:IPR011722"
+ /translation="MIASKFGIGQQVRHSLLGYLGVVVDIDPEYSLDEPSPDELAVND
+ ELRAAPWYHVVMEDDNGQPVHTYLAEAQLRSEMRDEHPEQPSMDELARTIRKQLQAPR
+ LRN"
+ misc_feature 1853685..1853999
+ /locus_tag="SARI_01931"
+ /note="heat shock protein HspQ; Provisional; Region:
+ PRK14129"
+ /db_xref="CDD:184526"
+ gene complement(1854057..1854473)
+ /locus_tag="SARI_01932"
+ CDS complement(1854057..1854473)
+ /locus_tag="SARI_01932"
+ /inference="protein motif:HMMPfam:IPR003781"
+ /inference="similar to AA sequence:REFSEQ:NP_455576.1"
+ /note="'KEGG: rru:Rru_A2075 9.5e-30
+ O-acetylhomoserine/O-acetylserine sulfhydrylase K01740;
+ COG: COG1832 Predicted CoA-binding protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570956.1"
+ /db_xref="GI:161503844"
+ /db_xref="InterPro:IPR003781"
+ /translation="MMKETDITDVLTSTRTIALVGASDKSDRPSYRVMKYLLDQGYHV
+ IPVAPKVAGKLLLGQQGYATLADIPEKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWLQ
+ LGVINEQAAVLARDAGMTVVMDRCPAIEIPRLGLAK"
+ misc_feature complement(1854060..1854473)
+ /locus_tag="SARI_01932"
+ /note="Predicted CoA-binding protein [General function
+ prediction only]; Region: COG1832"
+ /db_xref="CDD:224745"
+ gene 1854644..1855306
+ /locus_tag="SARI_01933"
+ CDS 1854644..1855306
+ /locus_tag="SARI_01933"
+ /inference="similar to AA sequence:REFSEQ:YP_216016.1"
+ /note="'COG: COG3110 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570957.1"
+ /db_xref="GI:161503845"
+ /translation="MKTGALTTFLALYLPVTVFATTLRLSNEVDLLVLDGKRVSGSLL
+ RGADSIELENGPHQLVLRVEKNIRLSGNEERLYISPPLVISFDTQQTSQVNFHLPRLE
+ NEREASHFNAAPRLMLLDGDAMPIPVKLDILTTTSTAKVVDYEIETERYNKSAKRASL
+ PQFATIMANDSTLLSDASELDAVPPQSQTLTEQRLKHWFRLADPQTRSHFLQWAEKQP
+ SS"
+ misc_feature 1854644..1855303
+ /locus_tag="SARI_01933"
+ /note="hypothetical protein; Provisional; Region:
+ PRK03641"
+ /db_xref="CDD:179619"
+ misc_feature 1854644..1855297
+ /locus_tag="SARI_01933"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG3110"
+ /db_xref="CDD:225652"
+ gene 1855401..1855859
+ /gene="mgsA"
+ /locus_tag="SARI_01934"
+ CDS 1855401..1855859
+ /gene="mgsA"
+ /locus_tag="SARI_01934"
+ /inference="protein motif:BlastProDom:IPR004363"
+ /inference="protein motif:HMMPfam:IPR011607"
+ /inference="protein motif:HMMPIR:IPR004363"
+ /inference="protein motif:HMMTigr:IPR004363"
+ /inference="protein motif:ScanRegExp:IPR004363"
+ /inference="similar to AA sequence:INSD:AAV77690.1"
+ /note="catalyzes the formation of methylglyoxal from
+ glycerone phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="methylglyoxal synthase"
+ /protein_id="YP_001570958.1"
+ /db_xref="GI:161503846"
+ /db_xref="InterPro:IPR004363"
+ /db_xref="InterPro:IPR011607"
+ /translation="MELTTRTLPTRKHIALVAHDHCKQMLMNWVERHQPLLEKHVLYA
+ TGTTGNLIQRATGMDVNAMLSGPMGGDQQVGALISEGKIDVLIFFWDPLNAVPHDPDV
+ KALLRLATVWNIPVATNVSTADFIIQSPHFNDAVDILIPDYARYLAERLK"
+ misc_feature 1855437..1855781
+ /gene="mgsA"
+ /locus_tag="SARI_01934"
+ /note="Methylglyoxal synthase catalyzes the enolization of
+ dihydroxyacetone phosphate (DHAP) to produce
+ methylglyoxal. The first part of the catalytic mechanism
+ is believed to be similar to TIM (triosephosphate
+ isomerase) in that both enzymes utilize DHAP to...;
+ Region: MGS; cd01422"
+ /db_xref="CDD:238710"
+ misc_feature order(1855449..1855451,1855467..1855469,1855533..1855535,
+ 1855539..1855544,1855593..1855598,1855611..1855613,
+ 1855692..1855694)
+ /gene="mgsA"
+ /locus_tag="SARI_01934"
+ /note="active site"
+ /db_xref="CDD:238710"
+ misc_feature order(1855458..1855460,1855539..1855541,1855590..1855595,
+ 1855599..1855604,1855614..1855619,1855635..1855637,
+ 1855674..1855676,1855701..1855703,1855710..1855712,
+ 1855719..1855727,1855731..1855748,1855755..1855766,
+ 1855773..1855775)
+ /gene="mgsA"
+ /locus_tag="SARI_01934"
+ /note="dimer interfaces [polypeptide binding]; other site"
+ /db_xref="CDD:238710"
+ misc_feature order(1855611..1855613,1855692..1855694)
+ /gene="mgsA"
+ /locus_tag="SARI_01934"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:238710"
+ unsure 1855729..1855923
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(1855895..1857949)
+ /gene="helD"
+ /locus_tag="SARI_01935"
+ CDS complement(1855895..1857949)
+ /gene="helD"
+ /locus_tag="SARI_01935"
+ /inference="protein motif:HMMPanther:IPR000212"
+ /inference="protein motif:HMMPfam:IPR000212"
+ /note="catalyzes the ATP-dependent unwinding of duplex DNA
+ in the 3' to 5' direction with respect to the bound single
+ strand"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA helicase IV"
+ /protein_id="YP_001570959.1"
+ /db_xref="GI:161503847"
+ /db_xref="InterPro:IPR000212"
+ /translation="MELKATSLGKRLAQHPYDRAVILNAGVKVSGDRHEYLIPFNQLL
+ AIHCKRGLVWGELEFVLPEDKVVRLHGTEWTETQQFHRHLDAHWRRWSQEMSDVAAQA
+ LQEQWARISERTGENQWLTRERVRGLEHEIRQTFAALPLPISRLEEFDNCREIWRKCL
+ AWLQDSEGSRQQHNQAYADAMLEAHADFFTEIETSPLNSSQARAVVNGESSLLVLAGA
+ GSGKTSVLVARAGWLLARGQADAGQILLLAFGRKAAEEMDERIRERLHTEEITARTFH
+ SLALYIIQQGSKKAPVVSKLESDAATRHQLFLHTWRQQCSEKKAQAKGWRQWLQEEMK
+ WTVPEGNFWDDETLQRRLAPRLDRWVSLMRMHGGAQAEMIAGAPEECRELFGKRIKLM
+ APLLKAWKSALKAENAVDFSGLIHQAMAILDKGRFISPWKHILVDEFQDISPQRAALL
+ QALRKQNSQTTLFAVGDDWQAIYRFSGAQLSLTTAFHQTFGEGEHCHLDTTYRFNSRI
+ GDIANRFVQQNPHQLKKPLNSLTAGDKKAVTLLDESQLDALLDKLSGYAKEDERILVL
+ ARYHHLKPTSLQKAAIRWPKLQIDFMTIHASKGQQADYVILVGLQEGSDGFPAPARES
+ IMEDALLPQAEDFPDAEERRLLYVALTRARARVWLLFNKENPSRFVAALKQLDVPVAR
+ KP"
+ misc_feature complement(1855898..1857949)
+ /gene="helD"
+ /locus_tag="SARI_01935"
+ /note="DNA helicase IV; Provisional; Region: helD;
+ PRK11054"
+ /db_xref="CDD:182930"
+ misc_feature complement(1857455..1857949)
+ /gene="helD"
+ /locus_tag="SARI_01935"
+ /note="DNA helicase IV / RNA helicase N terminal; Region:
+ Nucleolin_N; pfam12462"
+ /db_xref="CDD:221589"
+ misc_feature complement(1857113..1857346)
+ /gene="helD"
+ /locus_tag="SARI_01935"
+ /note="Part of AAA domain; Region: AAA_19; pfam13245"
+ /db_xref="CDD:222005"
+ misc_feature complement(1855970..1856350)
+ /gene="helD"
+ /locus_tag="SARI_01935"
+ /note="Family description; Region: UvrD_C_2; pfam13538"
+ /db_xref="CDD:222209"
+ gene 1858073..1858519
+ /locus_tag="SARI_01936"
+ CDS 1858073..1858519
+ /locus_tag="SARI_01936"
+ /inference="protein motif:HMMPfam:IPR005185"
+ /inference="protein motif:HMMPIR:IPR005185"
+ /inference="similar to AA sequence:INSD:AAL20007.1"
+ /note="'COG: COG3304 Predicted membrane protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570960.1"
+ /db_xref="GI:161503848"
+ /db_xref="InterPro:IPR005185"
+ /translation="MRTVLNILNFVLGGFATTLAWLLATLVSIVLIFTLPLTRSCWEI
+ TKLSLLPYGNEAIHVDELNPAAKNVLMNTGGTLLNIFWLLFFGWWLCVMHIASGIAQC
+ VTIIGIPVGIANFKIAAIALWPVGRRVVSVETARAAREANARRRFE"
+ misc_feature 1858073..1858474
+ /locus_tag="SARI_01936"
+ /note="Predicted membrane protein [Function unknown];
+ Region: COG3304"
+ /db_xref="CDD:225841"
+ misc_feature 1858079..1858237
+ /locus_tag="SARI_01936"
+ /note="Domain of unknown function (DUF307); Region:
+ DUF307; pfam03733"
+ /db_xref="CDD:202748"
+ misc_feature 1858298..1858456
+ /locus_tag="SARI_01936"
+ /note="Domain of unknown function (DUF307); Region:
+ DUF307; pfam03733"
+ /db_xref="CDD:202748"
+ gene 1858538..1860691
+ /locus_tag="SARI_01937"
+ CDS 1858538..1860691
+ /locus_tag="SARI_01937"
+ /inference="protein motif:HMMPfam:IPR010289"
+ /inference="protein motif:HMMTigr:IPR010019"
+ /inference="protein motif:HMMTigr:IPR010020"
+ /inference="protein motif:ScanRegExp:IPR005829"
+ /note="'KEGG: eco:b3358 6.6e-30 yhfK; conserved inner
+ membrane protein K01823;
+ COG: COG1289 Predicted membrane protein;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570961.1"
+ /db_xref="GI:161503849"
+ /db_xref="InterPro:IPR005829"
+ /db_xref="InterPro:IPR010019"
+ /db_xref="InterPro:IPR010020"
+ /db_xref="InterPro:IPR010289"
+ /translation="MLSPLIRRYTWNSTWLYYIRIFIALCGTTALPWWMGDVKLTIPL
+ TLGMVAAALTDLDDRLAGRLRNLIITLICFFIASASVELLFPWPWLFALGLTLSTSGF
+ ILLGGLGQRYATIAFGALLIAIYTMLGASLYTHWYQQPLLLLAGAVWYNLLTLTGHLL
+ FPIRPLQDNLARSYEQLAHYLELKSRLFDPDIEDESQAPLYDLALANGQLMATLNQTK
+ VSLLTRLRGDRGQRGTRRTLHYYFVAQDIHERASSSHIQYQTLRDHFRHSDVMFRFQR
+ LMSMQAQACTQLARCILLRTPYQHDPRFERVFTHIDAALERMRASGASLELLNTLGFL
+ LTNLRAIDAQLATIESEQAQAMPRNESENQLADDSLHGFSDIWLRLSRNFTPESALFR
+ HAVRMSLVLCVGYALIQITGMRHGYWILLTSLFVCQPNYNATRHRLALRIIGTLVGVA
+ IGLPILWFVPSLEGQLVLLVITGVLFFAFRNVQYAHATMFITLLVLLCFNLLGEGFEV
+ ALPRVIDTLLGCAIAWAAVSFIWPDWRFRNLPRVLQRATDANCRYLDAILEQYHQGRD
+ NRLAYRIARRDAHNRDAELASVVSNMSSEPDVTAETREAAFRLLCLNHTFTSYISALG
+ AHREKLSNPDVLGLLDDAVCYVDDALHHQPEDEQRVHLALEDLKQRVQSLETRPDSKE
+ PLVVQQIGLLIALLPEIGRLQRQISPLPSTAIAQP"
+ misc_feature 1858559..1860655
+ /locus_tag="SARI_01937"
+ /note="TIGR01666 family membrane protein; Region: YCCS"
+ /db_xref="CDD:130727"
+ misc_feature 1858733..1859572
+ /locus_tag="SARI_01937"
+ /note="FUSC-like inner membrane protein yccS; Region:
+ FUSC-like; pfam12805"
+ /db_xref="CDD:221781"
+ misc_feature 1859744..1860115
+ /locus_tag="SARI_01937"
+ /note="Fusaric acid resistance protein-like; Region:
+ FUSC_2; pfam13515"
+ /db_xref="CDD:222189"
+ unsure 1860320..1860343
+ /locus_tag="SARI_01937"
+ /note="Sequence derived from one plasmid subclone"
+ unsure 1860493..1861321
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(1860669..1861283)
+ /locus_tag="SARI_01938"
+ CDS complement(1860669..1861283)
+ /locus_tag="SARI_01938"
+ /inference="protein motif:HMMPfam:IPR007076"
+ /inference="protein motif:HMMPfam:IPR007077"
+ /inference="similar to AA sequence:REFSEQ:NP_460046.1"
+ /note="'COG: COG3070 Regulator of competence-specific
+ genes;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570962.1"
+ /db_xref="GI:161503850"
+ /db_xref="InterPro:IPR007076"
+ /db_xref="InterPro:IPR007077"
+ /translation="MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVA
+ NGELYLRACEQSVSYCVKHPPVWLTFMKCGRPVMLNYYRVDESLWRDQQQLVRLSKYS
+ LDAAMKEKHSRFLQHRLKDLPNMTFHLETLLNESGIKDENMLRVLGAKMCWLRLRQSN
+ PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAAQLL"
+ misc_feature complement(1860921..1861280)
+ /locus_tag="SARI_01938"
+ /note="Regulator of competence-specific genes
+ [Transcription]; Region: TfoX; COG3070"
+ /db_xref="CDD:225612"
+ misc_feature complement(1860699..1860929)
+ /locus_tag="SARI_01938"
+ /note="TfoX C-terminal domain; Region: TfoX_C; pfam04994"
+ /db_xref="CDD:218369"
+ gene 1861500..1862009
+ /locus_tag="SARI_01939"
+ CDS 1861500..1862009
+ /locus_tag="SARI_01939"
+ /inference="protein motif:HMMPfam:IPR004596"
+ /inference="protein motif:HMMTigr:IPR004596"
+ /inference="similar to AA sequence:SwissProt:P0A241"
+ /note="'COG: COG5404 SOS-response cell division inhibitor,
+ blocks FtsZ ring formation;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="SOS cell division inhibitor"
+ /protein_id="YP_001570963.1"
+ /db_xref="GI:161503851"
+ /db_xref="InterPro:IPR004596"
+ /translation="MYTSGYANRSSSFPTTTHNAARAATENAAAGLVSEVVYHEDQPM
+ MAQLLLLPLLRHLGQQSRWQLWLTPQQKLSREWVQSAGLPLTKVMQISQLAPPHTLES
+ MIRALRTGNYSVVIGWLTEELTEEEHASLVEAANVGNAVGFIMRPVRAHALPRRQHSG
+ LKIHSNLYH"
+ misc_feature 1861503..1862006
+ /locus_tag="SARI_01939"
+ /note="cell division inhibitor SulA; Region: sula;
+ TIGR00623"
+ /db_xref="CDD:129710"
+ unsure 1862224..1862891
+ /note="Sequence derived from one plasmid subclone"
+ gene 1862343..1863419
+ /locus_tag="SARI_01940"
+ CDS 1862343..1863419
+ /locus_tag="SARI_01940"
+ /inference="protein motif:BlastProDom:IPR006665"
+ /inference="protein motif:HMMPfam:IPR000498"
+ /inference="protein motif:HMMPfam:IPR006665"
+ /inference="protein motif:ScanRegExp:IPR006690"
+ /inference="similar to AA sequence:INSD:AAN79561.1"
+ /note="'OmpA is believed to be a porin, involved in
+ diffusion of nonspecific small solutes across the outer
+ membrane. It is the most abundant integral protein of the
+ outer membrane of E. coli, and it is known to play a role
+ as a phage receptor, a mediator of F-factor dependent
+ conjugation, and in maintaining the structural shape of
+ the outer membrane; 3a; II*; G; d'"
+ /codon_start=1
+ /transl_table=11
+ /product="outer membrane protein A"
+ /protein_id="YP_001570964.1"
+ /db_xref="GI:161503852"
+ /db_xref="InterPro:IPR000498"
+ /db_xref="InterPro:IPR006665"
+ /db_xref="InterPro:IPR006690"
+ /translation="MDDNEAQKMKKTAIAIAVALAGFATVAQAAPKDNTWYTGAKLGW
+ SQYHDTGFIPNNGPTHENQLGAGAFGGYQVNPYVGFEMGYDWLGRMPYKGDNINGAYK
+ AQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKSNTPGGASYKDHDTGVSPVFAGGI
+ EYAITPEIATRLEYQWTNNIGDAHTIGTRPDNGLLSVGVSYRFGQEEAAPMPAPTPAP
+ APEVQTKHFTLKSDVLFTFNKDNLKPEGKQALDQLYNQLNNLDPKDGSVVVLGFTDRI
+ GSDAYNQGLSEKRAQSVVNYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALID
+ CLAPDRRVEIEVKGIKDVVTQPQA"
+ misc_feature 1862367..1863416
+ /locus_tag="SARI_01940"
+ /note="outer membrane protein A; Reviewed; Region:
+ PRK10808"
+ /db_xref="CDD:236764"
+ misc_feature 1862433..1862963
+ /locus_tag="SARI_01940"
+ /note="OmpA-like transmembrane domain; Region:
+ OmpA_membrane; pfam01389"
+ /db_xref="CDD:201764"
+ misc_feature 1863036..1863380
+ /locus_tag="SARI_01940"
+ /note="Peptidoglycan binding domains similar to the
+ C-terminal domain of outer-membrane protein OmpA; Region:
+ OmpA_C-like; cd07185"
+ /db_xref="CDD:143586"
+ misc_feature order(1863051..1863056,1863159..1863164,1863171..1863173,
+ 1863183..1863188,1863195..1863197,1863348..1863350,
+ 1863360..1863362)
+ /locus_tag="SARI_01940"
+ /note="ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:143586"
+ unsure 1862968..1863242
+ /locus_tag="SARI_01940"
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(1863479..1863931)
+ /locus_tag="SARI_01941"
+ CDS complement(1863479..1863931)
+ /locus_tag="SARI_01941"
+ /inference="protein motif:HMMPfam:IPR009390"
+ /inference="protein motif:superfamily:IPR010985"
+ /inference="similar to AA sequence:SwissProt:Q8ZQ68"
+ /note="'COG: COG3120 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570965.1"
+ /db_xref="GI:161503853"
+ /db_xref="InterPro:IPR009390"
+ /db_xref="InterPro:IPR010985"
+ /translation="MKYQQLENLESGWKWKYLVKKHREGELITRYVEASAAQEAVNLL
+ LALENEPVRVNVWIDRHMNPALLNRMKQTIRARRKRHFNAEHQHTRKKSIDLEFMVWQ
+ RLAGLAQRRGKTLSETIVQLIEDAEHKEKYATTMSTLKQDLQALLGKK"
+ misc_feature complement(1863482..1863931)
+ /locus_tag="SARI_01941"
+ /note="Ter macrodomain organizer matS-binding protein;
+ Provisional; Region: PRK05097"
+ /db_xref="CDD:235344"
+ unsure 1863992..1864027
+ /note="Sequence derived from one plasmid subclone"
+ gene 1864117..1865877
+ /locus_tag="SARI_01942"
+ CDS 1864117..1865877
+ /locus_tag="SARI_01942"
+ /inference="protein motif:HMMPfam:IPR008269"
+ /note="'KEGG: spt:SPA1782 0. lonH; Lon-like ATP-dependent
+ protease K04770;
+ COG: COG1067 Predicted ATP-dependent protease;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570966.1"
+ /db_xref="GI:161503854"
+ /db_xref="InterPro:IPR008269"
+ /translation="MTITKLAWRDLVPDSESYQEIFAQPHATNEKDTLLSDTQPRLQF
+ ALEQLIQPRASSSFMLTKAPEEQEYLTLLSDVVRALQTDAGQLTGGHYDVSGHTIHYR
+ AAQDVQDNFATLAQVVSADWVEAEQLFGCLRQYKGDITLQPGLVHQANGGVLIISLRT
+ LLAQPLLWMRLKAIVTRERFDWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQE
+ MEPELAEQAIYSEFEDNLQIADAEAMTLWCQWVTHIASRDNLPAPAPDVWPVLIREAV
+ RYTGEQDTLPLCPLWIARQFKEAAPLCEGETCGAEALSLMLARREWREGFLAERMQDE
+ ILQEQILIETEGERVGQINALSVIEFPGHPRAFGEPSRISCVVHIGDGEFNDIERKAE
+ LGGNIHAKGMMIMQAFLMSELQLEQQIPFSASLTFEQSYSEVDGDSASMAELCALISA
+ LANVPVNQNIAITGSVDQFGRAQPVGGLNEKIEGFFAICEQRELSGKQGVIIPAANVR
+ HLSLKSRLLQAVKEEKFTIWAVDDVTDALPLLLNLVWDGEGQTTLMQTIQERIAQATQ
+ QEGRHRFPWPLRWLNYFIPN"
+ misc_feature 1864117..1865832
+ /locus_tag="SARI_01942"
+ /note="Predicted ATP-dependent protease [Posttranslational
+ modification, protein turnover, chaperones]; Region: LonB;
+ COG1067"
+ /db_xref="CDD:223994"
+ misc_feature <1865419..1865739
+ /locus_tag="SARI_01942"
+ /note="Lon protease (S16) C-terminal proteolytic domain;
+ Region: Lon_C; pfam05362"
+ /db_xref="CDD:191262"
+ gene 1865946..1866464
+ /locus_tag="SARI_01943"
+ CDS 1865946..1866464
+ /locus_tag="SARI_01943"
+ /inference="protein motif:HMMPanther:IPR000794"
+ /inference="protein motif:HMMPfam:IPR013114"
+ /inference="protein motif:HMMTigr:IPR010083"
+ /inference="similar to AA sequence:INSD:AAL20000.1"
+ /note="'catalyzes the dehydration of
+ (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or
+ 3,4-decenoyl-ACP'"
+ /codon_start=1
+ /transl_table=11
+ /product="3-hydroxydecanoyl-(acyl carrier protein)
+ dehydratase"
+ /protein_id="YP_001570967.1"
+ /db_xref="GI:161503855"
+ /db_xref="InterPro:IPR000794"
+ /db_xref="InterPro:IPR010083"
+ /db_xref="InterPro:IPR013114"
+ /translation="MVDKRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVVKMT
+ ETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFYLGWLGGEG
+ KGRALGVGEVKFTGQVLPTAKKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTAHD
+ LKVGLFQDTSAF"
+ misc_feature 1866024..1866449
+ /locus_tag="SARI_01943"
+ /note="FabA, beta-hydroxydecanoyl-acyl carrier protein
+ (ACP)-dehydratase: Bacterial protein of the type II, fatty
+ acid synthase system that binds ACP and catalyzes both
+ dehydration and isomerization reactions, apparently in the
+ same active site. The FabA...; Region: FabA; cd01287"
+ /db_xref="CDD:238614"
+ misc_feature order(1866024..1866032,1866198..1866200,1866207..1866212,
+ 1866219..1866224,1866255..1866266)
+ /locus_tag="SARI_01943"
+ /note="active site 1 [active]"
+ /db_xref="CDD:238614"
+ misc_feature order(1866027..1866029,1866033..1866035,1866186..1866188,
+ 1866198..1866200,1866255..1866281,1866285..1866287,
+ 1866291..1866296)
+ /locus_tag="SARI_01943"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238614"
+ misc_feature order(1866177..1866185,1866285..1866296)
+ /locus_tag="SARI_01943"
+ /note="active site 2 [active]"
+ /db_xref="CDD:238614"
+ gene complement(1866980..1867543)
+ /locus_tag="SARI_01944"
+ CDS complement(1866980..1867543)
+ /locus_tag="SARI_01944"
+ /inference="protein motif:HMMPfam:IPR005586"
+ /inference="similar to AA sequence:REFSEQ:YP_151013.1"
+ /note="'COG: COG3009 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570968.1"
+ /db_xref="GI:161503856"
+ /db_xref="InterPro:IPR005586"
+ /translation="MKKWLVVIMAFWLASCSSSGENKSYYQLPIAQSGVQSTASQGNR
+ LLWVEQVSVPDYLAGNGVVYQTSDVQYVIANNNLWASPLDQQLRNTLVANLSTRLPGW
+ IVASQPLGTTQDTLNVTVTGFHGRYDGKVIVSGEWLLNHNGQLIKRPFHIEASQQKDG
+ YDEMVKVLASVWSQEATAMADEIKRLP"
+ misc_feature complement(1866983..1867543)
+ /locus_tag="SARI_01944"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG3009"
+ /db_xref="CDD:225554"
+ misc_feature complement(1867004..1867465)
+ /locus_tag="SARI_01944"
+ /note="Protein of unknown function (DUF330); Region:
+ DUF330; pfam03886"
+ /db_xref="CDD:217780"
+ gene complement(1867540..1869198)
+ /locus_tag="SARI_01945"
+ CDS complement(1867540..1869198)
+ /locus_tag="SARI_01945"
+ /inference="protein motif:HMMPfam:IPR003399"
+ /inference="similar to AA sequence:INSD:AAX64922.1"
+ /note="'COG: COG3008 Paraquat-inducible protein B;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="paraquat-inducible protein B"
+ /protein_id="YP_001570969.1"
+ /db_xref="GI:161503857"
+ /db_xref="InterPro:IPR003399"
+ /translation="MRSPDSMESKKGEAKVQKVKNWSPVWIFPIITALIGAWILFYHY
+ SHQGPEVTLITTNAEGIEGGKTTIKSRSVDVGVVESATLTDDLTHVQIKARLHSGMEK
+ LLHKDSVFWVVKPQVGREGISGLGTLLSGAYIELQPGNKGSQPESYQLLDSPPLAPPD
+ AKGIRVILDSKKAGQLSPGDPVLFRGYRVGSVETSMFDPQKRSISYQLFINAPNDRLV
+ TSNVRFWKDSGIAVDLTSAGMRVEMGSLSTLFGGGVSFDVPEGLEQGQPVAEKTAFSL
+ YDDQKSIQDSLYTDHIDYLMFFKDSIRGLQPGAPVEFRGIRLGTVGKVPFFAPGMRQA
+ FNDDYRIPVLVRIEPERLKAQLGENTDVGAHLADLLNRGLRASLKTGNLVTGALYVDL
+ DFYPKEPPLKGIREFGGYQIIPTVSGGLAQIQQRLMEALDKINNLPLNPMIEQATNTL
+ TESQRTMKHLQTTLDNMDKITSSQSMQQLPADMQTTLRELNRSMQGFQPGSAAYNKMV
+ ADMQRLDQVLRELQPVLKTLNEKSNALVFEAKDKKDPEPKRAKQ"
+ misc_feature complement(1867543..1869180)
+ /locus_tag="SARI_01945"
+ /note="paraquat-inducible protein B; Provisional; Region:
+ PRK10807"
+ /db_xref="CDD:182747"
+ misc_feature complement(1868782..1869060)
+ /locus_tag="SARI_01945"
+ /note="mce related protein; Region: MCE; pfam02470"
+ /db_xref="CDD:217055"
+ misc_feature complement(<1868527..1868715)
+ /locus_tag="SARI_01945"
+ /note="mce related protein; Region: MCE; pfam02470"
+ /db_xref="CDD:217055"
+ misc_feature complement(1868017..1868331)
+ /locus_tag="SARI_01945"
+ /note="mce related protein; Region: MCE; pfam02470"
+ /db_xref="CDD:217055"
+ gene complement(1869185..1870438)
+ /locus_tag="SARI_01946"
+ CDS complement(1869185..1870438)
+ /locus_tag="SARI_01946"
+ /inference="protein motif:HMMPfam:IPR007498"
+ /inference="protein motif:HMMTigr:IPR005219"
+ /inference="similar to AA sequence:INSD:CAD08189.1"
+ /note="'COG: COG2995 Uncharacterized paraquat-inducible
+ protein A;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="paraquat-inducible protein A"
+ /protein_id="YP_001570970.2"
+ /db_xref="GI:448236247"
+ /db_xref="InterPro:IPR005219"
+ /db_xref="InterPro:IPR007498"
+ /translation="MCEHHHAAKHILCSQCDMLVALPRLSHGQKAACPRCGATLTTEW
+ DAPRQRPTAYALAALFMLLLSNLFPFVNMNVAGVTSEVTLLEIPGVMFSEDYASLGTF
+ FLLFVQLVPAFCLVTILLLVNRASLPLSVKKTLARILFLLKSWGMAEIFLAGVLVSFV
+ KLMAYGDIGIGSSFIPWCLFCLVQLRAFQCVDRRWLWDDIAPQPALAQPLTPGITGIR
+ QSLRSCACCTAILPAESLVCPRCHTKGYVRRKNSLQWTLALLFTSIMLYLPANILPIM
+ ITDLLGSKMPSTILAGVILLWSEGSYPVAAVIFLASIMVPTLKMIAIAWLCWDAKGHG
+ KRDSERMHFIYEIVEFVGRWSMIDVFVIAVLSALVRMGGLMNIYPAMGALMFALVVIM
+ TMFSAMTFDPRLSWDREYEPGHEES"
+ misc_feature complement(1869188..1870438)
+ /locus_tag="SARI_01946"
+ /note="paraquat-inducible membrane protein A; Provisional;
+ Region: PRK15103"
+ /db_xref="CDD:237910"
+ misc_feature complement(1869839..1870237)
+ /locus_tag="SARI_01946"
+ /note="Paraquat-inducible protein A; Region: PqiA;
+ pfam04403"
+ /db_xref="CDD:218068"
+ misc_feature complement(1869203..1869685)
+ /locus_tag="SARI_01946"
+ /note="Paraquat-inducible protein A; Region: PqiA;
+ pfam04403"
+ /db_xref="CDD:218068"
+ gene complement(1870453..1872345)
+ /locus_tag="SARI_01947"
+ CDS complement(1870453..1872345)
+ /locus_tag="SARI_01947"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /note="Uup; in Escherichia coli this cytoplasmic protein
+ was shown to contain ATPase activity; mutations in this
+ gene affect RecA-independent excision of transposons and
+ affects Mu bacteriophage growth"
+ /codon_start=1
+ /transl_table=11
+ /product="ABC transporter ATPase component"
+ /protein_id="YP_001570971.1"
+ /db_xref="GI:161503859"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MHGAWLSFSDAPLLDNAELHIEDNERVCLVGRNGAGKSTLMKIL
+ NREQGLDDGRIIYEQDLIVARLQQDPPRNIAGSVYDFVAEGIEEQAEYLKRYHEISRL
+ VMTDPSEKNLNEMARVQEQLDHHNLWQLENRINEVLAQLGLDPNAALSSLSGGWLRKA
+ ALGRALVSNPRVLLLDEPTNHLDIETIDWLEGFLKTFNGTIIFISHDRSFIRNMATRI
+ VDLDRGKLVTYPGNYDQYLLEKEEALRVEELQNAEFDRKLAQEEVWIRQGIKARRTRN
+ EGRVRALKAMRRERSERREVMGTAKMQVEEATRSGKIVFEMENVDYQLEGKQLVKDFS
+ AQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHVGTKLEVAYFDQHRAELDPE
+ KTVMDNLAEGKQEVMVNGKPRHVLGYLQDFLFHPKRAMTPVRALSGGERNRLLLARLF
+ LKPSNLLILDEPTNDLDVETLELLEELIDGYQGTVLLVSHDRQFVDNTVTECWIFEGG
+ GKIGRYIGGYHDARAQQEQHLATRQPMVRKNEEVIAPKAEIVKRGSSKLSYKLQRELE
+ QLPGQLEDLEAKLEALQAQVADAAFFSQPHEQTQKVLADLSQAEQELEQAFERWEYLE
+ GLKNGA"
+ misc_feature complement(1870456..1872345)
+ /locus_tag="SARI_01947"
+ /note="ABC transporter ATPase component; Reviewed; Region:
+ PRK11147"
+ /db_xref="CDD:236861"
+ misc_feature complement(<1872142..1872330)
+ /locus_tag="SARI_01947"
+ /note="ATP-binding cassette transporter nucleotide-binding
+ domain; Region: ABC_ATPase; cl17201"
+ /db_xref="CDD:247755"
+ misc_feature complement(<1871794..1872261)
+ /locus_tag="SARI_01947"
+ /note="ATP-binding cassette transporter nucleotide-binding
+ domain; Region: ABC_ATPase; cl17201"
+ /db_xref="CDD:247755"
+ misc_feature complement(1872232..1872255)
+ /locus_tag="SARI_01947"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(1872232..1872255)
+ /locus_tag="SARI_01947"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(order(1871815..1871820,1872016..1872018,
+ 1872229..1872237,1872241..1872246))
+ /locus_tag="SARI_01947"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(order(1872142..1872144,1872229..1872237,
+ 1872241..1872246))
+ /locus_tag="SARI_01947"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(1872142..1872153)
+ /locus_tag="SARI_01947"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(order(1872016..1872018,1872025..1872033))
+ /locus_tag="SARI_01947"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(1871671..>1871892)
+ /locus_tag="SARI_01947"
+ /note="ATP-binding cassette domain of elongation factor 3,
+ subfamily F; Region: ABCF_EF-3; cd03221"
+ /db_xref="CDD:213188"
+ misc_feature complement(1871863..1871892)
+ /locus_tag="SARI_01947"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(1871815..1871832)
+ /locus_tag="SARI_01947"
+ /note="Walker B; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(1871797..1871808)
+ /locus_tag="SARI_01947"
+ /note="D-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(1871488..1871691)
+ /locus_tag="SARI_01947"
+ /note="ABC transporter; Region: ABC_tran_2; pfam12848"
+ /db_xref="CDD:221805"
+ misc_feature complement(1870828..1871400)
+ /locus_tag="SARI_01947"
+ /note="ATP-binding cassette domain of elongation factor 3,
+ subfamily F; Region: ABCF_EF-3; cd03221"
+ /db_xref="CDD:213188"
+ gene complement(1872373..1874481)
+ /gene="rlmL"
+ /locus_tag="SARI_01948"
+ CDS complement(1872373..1874481)
+ /gene="rlmL"
+ /locus_tag="SARI_01948"
+ /inference="protein motif:HMMPfam:IPR000241"
+ /inference="protein motif:HMMPfam:IPR004114"
+ /inference="protein motif:HMMPfam:IPR004398"
+ /inference="protein motif:ScanRegExp:IPR000241"
+ /inference="protein motif:ScanRegExp:IPR002052"
+ /note="catalyzes the N2-methyl guanosine modification of
+ the G2445 residue of 23S rRNA"
+ /codon_start=1
+ /transl_table=11
+ /product="23S rRNA m(2)G2445 methyltransferase"
+ /protein_id="YP_001570972.1"
+ /db_xref="GI:161503860"
+ /db_xref="InterPro:IPR000241"
+ /db_xref="InterPro:IPR002052"
+ /db_xref="InterPro:IPR004114"
+ /db_xref="InterPro:IPR004398"
+ /translation="MNSLFASTARGLEELLKTELEKLGAVECQVVQGGVHFQGDTRLI
+ YQSLMWSRLASRIILPMGECKVYSDLDLYLGVQAINWTEIFNPGATFAVHFSGLNDTI
+ RNSQYGAMKVKDAIVDAFTRKNLPRPNVDRESPDLRINVWLNKETASIALDLSGDGLH
+ LRGYRDRAGLAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMWATDRAPGL
+ HRGHWGFSGWAQHDETIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIERARSNAR
+ RAGIGELITFEVKDVAQLSNPLPKGPYGTVISNPPYGERLDSEPALIALHSLLGRIMK
+ NQFGGWNLSLFSASPDLLGSLQLRADKQFKAKNGPLDCVQKNYHIAETTADSKPATVA
+ EDYANRLRKNLKKLEKWARQEGIECYRLYDADLPEYNVAVDRYGDWAVIQEYAPPKTV
+ DAQKARQRLFDIIAATLSVLGIPPNKLVLKTRERQKGKNQYQKMSEKGEFLEVSEYNA
+ RLWVNLTDYLDTGLFLDHRIARRMLGEMSQGKDFLNLFSYTGSASVHAGLGGARSTTT
+ VDMSRTYLEWAERNLRLNGLSGRAHRLIQADCLGWLREANEQFDLIFIDPPTFSNSKR
+ MEASFDVQRDHVALMKDLKRLLRKGGTIMFSNNKRGFRMDLEGLAELGLTAQEITQKT
+ LSPDFARNRQIHNCWLICAA"
+ misc_feature complement(1872385..1874481)
+ /gene="rlmL"
+ /locus_tag="SARI_01948"
+ /note="23S rRNA m(2)G2445 methyltransferase; Provisional;
+ Region: rlmL; PRK11783"
+ /db_xref="CDD:236981"
+ misc_feature complement(1874014..1874472)
+ /gene="rlmL"
+ /locus_tag="SARI_01948"
+ /note="THUMP domain associated with
+ S-adenosylmethionine-dependent methyltransferases; Region:
+ THUMP_AdoMetMT; cd11715"
+ /db_xref="CDD:212584"
+ misc_feature complement(1873354..1873998)
+ /gene="rlmL"
+ /locus_tag="SARI_01948"
+ /note="Putative RNA methylase family UPF0020; Region:
+ UPF0020; pfam01170"
+ /db_xref="CDD:216342"
+ misc_feature complement(1872517..1872861)
+ /gene="rlmL"
+ /locus_tag="SARI_01948"
+ /note="S-adenosylmethionine-dependent methyltransferases
+ (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
+ that use S-adenosyl-L-methionine (SAM or AdoMet) as a
+ substrate for methyltransfer, creating the product
+ S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
+ cd02440"
+ /db_xref="CDD:100107"
+ misc_feature complement(order(1872637..1872639,1872688..1872696,
+ 1872775..1872780,1872829..1872849))
+ /gene="rlmL"
+ /locus_tag="SARI_01948"
+ /note="S-adenosylmethionine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:100107"
+ gene 1874622..1875689
+ /locus_tag="SARI_01949"
+ CDS 1874622..1875689
+ /locus_tag="SARI_01949"
+ /inference="protein motif:Gene3D:IPR012675"
+ /inference="protein motif:HMMPfam:IPR001041"
+ /inference="protein motif:HMMPfam:IPR005302"
+ /inference="protein motif:HMMPfam:IPR005303"
+ /inference="protein motif:superfamily:IPR001041"
+ /inference="similar to AA sequence:INSD:AAL19993.1"
+ /note="'KEGG: eci:UTI89_C0875 1.8e-05 hcr; NADH
+ oxidoreductase;
+ COG: COG0633 Ferredoxin;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570973.1"
+ /db_xref="GI:161503861"
+ /db_xref="InterPro:IPR001041"
+ /db_xref="InterPro:IPR005302"
+ /db_xref="InterPro:IPR005303"
+ /db_xref="InterPro:IPR012675"
+ /translation="MRGIGLTHALADISGLAFDRIFMITEPDGTFITARQFPQMVRFT
+ PSPLHDGLHLTAPDGSNALVRFTDFTPQDAPTEVWGNHFTARVAPTAINQWLSGFFSR
+ DVQLRWVGPQLTRRVKRHNAVPLGFADGYPYLLTNEASLRDLQQRCPAGVQMEQFRPN
+ LVVSGVAAWEEDNWKVLRIGDVIFDVVKPCSRCIFTTISPEKGQKHPSGEPLATLQAF
+ RTALDNGDVDFGQNLIARNSGVIRVGDEVEILATAPAKAYGTAAVDDSITPDKHPDVS
+ VTIDWQGQIFRGNNQQVLLEQLENQGIRIPYSCRAGICGCCRIRLLEGEVSPLKKSAI
+ GDDGTILSCSCVPKTALRLEN"
+ misc_feature 1874622..1875371
+ /locus_tag="SARI_01949"
+ /note="Uncharacterized Fe-S protein [General function
+ prediction only]; Region: COG3217"
+ /db_xref="CDD:225758"
+ misc_feature 1874622..1874930
+ /locus_tag="SARI_01949"
+ /note="MOSC N-terminal beta barrel domain; Region: MOSC_N;
+ pfam03476"
+ /db_xref="CDD:217584"
+ misc_feature 1874979..1875368
+ /locus_tag="SARI_01949"
+ /note="MOSC domain; Region: MOSC; pfam03473"
+ /db_xref="CDD:217583"
+ misc_feature 1875444..1875683
+ /locus_tag="SARI_01949"
+ /note="2Fe-2S iron-sulfur cluster binding domain.
+ Iron-sulfur proteins play an important role in electron
+ transfer processes and in various enzymatic reactions. The
+ family includes plant and algal ferredoxins, which act as
+ electron carriers in photosynthesis...; Region: fer2;
+ cd00207"
+ /db_xref="CDD:238126"
+ misc_feature order(1875534..1875539,1875546..1875548,1875555..1875557,
+ 1875561..1875572,1875645..1875650)
+ /locus_tag="SARI_01949"
+ /note="catalytic loop [active]"
+ /db_xref="CDD:238126"
+ misc_feature order(1875546..1875548,1875561..1875563,1875570..1875572,
+ 1875648..1875650)
+ /locus_tag="SARI_01949"
+ /note="iron binding site [ion binding]; other site"
+ /db_xref="CDD:238126"
+ gene complement(1875686..1876228)
+ /locus_tag="SARI_01950"
+ CDS complement(1875686..1876228)
+ /locus_tag="SARI_01950"
+ /inference="protein motif:HMMPfam:IPR009809"
+ /inference="similar to AA sequence:INSD:CAD08185.1"
+ /note="'COG: NOG07913 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570974.1"
+ /db_xref="GI:161503862"
+ /db_xref="InterPro:IPR009809"
+ /translation="MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFSRKMLTPDAF
+ CPTGFCVDDAALYFSFEEKCRDFELTKEQRAELVLNALVAIRYLKPQMPKSWHFVAHG
+ EMWPPGTGDAASVWLSDTAEQVNLLVVEPGENAALCLLAQPGVMIAGRTMQLGDAIKI
+ MNDRLKPQAYCHSFSLEQAV"
+ misc_feature complement(1875728..1876168)
+ /locus_tag="SARI_01950"
+ /note="Protein of unknown function (DUF1379); Region:
+ DUF1379; pfam07126"
+ /db_xref="CDD:203584"
+ gene complement(1876404..1877414)
+ /locus_tag="SARI_01951"
+ CDS complement(1876404..1877414)
+ /locus_tag="SARI_01951"
+ /inference="protein motif:HMMPfam:IPR001295"
+ /inference="protein motif:HMMPIR:IPR012135"
+ /inference="protein motif:HMMTigr:IPR005719"
+ /inference="protein motif:ScanRegExp:IPR001295"
+ /inference="similar to AA sequence:SwissProt:P25468"
+ /note="'catalyzes the conversion of dihydroorotate to
+ orotate in the pyrimidine biosynthesis pathway; uses a
+ flavin nucleotide as an essential cofactor; class 2
+ enzymes are monomeric and compared to the class 1 class 2
+ possess an extended N terminus, which plays a role in the
+ membrane association of the enzyme and provides the
+ binding site for the respiratory quinones that serve as
+ physiological electron acceptors'"
+ /codon_start=1
+ /transl_table=11
+ /product="dihydroorotate dehydrogenase 2"
+ /protein_id="YP_001570975.1"
+ /db_xref="GI:161503863"
+ /db_xref="InterPro:IPR001295"
+ /db_xref="InterPro:IPR005719"
+ /db_xref="InterPro:IPR012135"
+ /translation="MYYPFVRKALFQLDPERAHEFTFQQLRRITGTPLEALVRQKVPT
+ KPVTCMGLTFKNPLGLAAGLDKDGECIDALGAMGFGSLEIGTVTPRPQPGNDKPRLFR
+ LVDAEGLINRMGFNNLGVDNLVENVKKAHFDGILGINIGKNKDTPVENGKDDYLICME
+ KVYAYAGYIAINISSPNTPGLRTLQYGDALDDLLIAIKNKQNDLQAIHHKYVPVAVKI
+ APDLCEEELIQVADSLLRHNIDGVIATNTTLDRSLVQGMKNCQQTGGLSGRPLQLKST
+ EIIRRLSQELNGQLPIIGVGGIDSVIAAREKIAAGATLVQIYSGFIFKGPPLIKEIVT
+ HI"
+ misc_feature complement(1876407..1877414)
+ /locus_tag="SARI_01951"
+ /note="dihydroorotate dehydrogenase 2; Reviewed; Region:
+ PRK05286"
+ /db_xref="CDD:235388"
+ misc_feature complement(1876407..1877396)
+ /locus_tag="SARI_01951"
+ /note="Dihydroorotate dehydrogenase (DHOD) class 2. DHOD
+ catalyzes the oxidation of (S)-dihydroorotate to orotate.
+ This is the fourth step and the only redox reaction in the
+ de novo biosynthesis of UMP, the precursor of all
+ pyrimidine nucleotides. DHOD requires...; Region:
+ DHOD_2_like; cd04738"
+ /db_xref="CDD:240089"
+ misc_feature complement(order(1877109..1877111,1877358..1877360))
+ /locus_tag="SARI_01951"
+ /note="quinone interaction residues [chemical binding];
+ other site"
+ /db_xref="CDD:240089"
+ misc_feature complement(order(1876458..1876463,1876524..1876526,
+ 1876611..1876613,1876674..1876682,1876764..1876766,
+ 1876884..1876886,1876890..1876892,1876899..1876901,
+ 1877070..1877078,1877082..1877084,1877157..1877159,
+ 1877217..1877219,1877229..1877231))
+ /locus_tag="SARI_01951"
+ /note="active site"
+ /db_xref="CDD:240089"
+ misc_feature complement(order(1876764..1876766,1876890..1876892,
+ 1877217..1877219))
+ /locus_tag="SARI_01951"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:240089"
+ misc_feature complement(order(1876458..1876463,1876524..1876526,
+ 1876611..1876613,1876677..1876682,1876764..1876766,
+ 1876899..1876901,1877082..1877084,1877157..1877159))
+ /locus_tag="SARI_01951"
+ /note="FMN binding site [chemical binding]; other site"
+ /db_xref="CDD:240089"
+ misc_feature complement(order(1876674..1876679,1876893..1876895,
+ 1876899..1876901,1877082..1877084))
+ /locus_tag="SARI_01951"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:240089"
+ gene complement(1877621..1880233)
+ /gene="pepN"
+ /locus_tag="SARI_01952"
+ CDS complement(1877621..1880233)
+ /gene="pepN"
+ /locus_tag="SARI_01952"
+ /inference="protein motif:FPrintScan:IPR001930"
+ /inference="protein motif:HMMPanther:IPR001930"
+ /inference="protein motif:HMMPfam:IPR001930"
+ /inference="protein motif:HMMTigr:IPR012779"
+ /inference="protein motif:ScanRegExp:IPR006025"
+ /note="'KEGG: stm:STM1057 0. pepN; aminopeptidase N
+ K01256;
+ COG: COG0308 Aminopeptidase N;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="aminopeptidase N"
+ /protein_id="YP_001570976.1"
+ /db_xref="GI:161503864"
+ /db_xref="InterPro:IPR001930"
+ /db_xref="InterPro:IPR006025"
+ /db_xref="InterPro:IPR012779"
+ /translation="MTQQPQAKYRHDYRAPDYQITDIDLTFDLDAEKTVVTAISQAVR
+ HGAPDAPLRLDGEDLMLVSLHVNDAPWTAYKEEEGALIISDLPERFTLRIVNEISPAA
+ NTALEGLYQSGDALCTQCEAEGFRHITWYLDRPDVLARFTTKIIADKTKYPFLLSNGN
+ RVAQGELENGRHWVQWQDPFPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRG
+ NLDRAPWAMTSLKNSMKWDETRFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYV
+ LARTDTATDKDYLDIERVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDL
+ GSRAVNRISNVRTMRGLQFAEDASPMAHPIRPDKVIEMNNFYTLTVYEKGAEVIRMIH
+ TLLGEENFQKGMQLYFERHDGSAATCDDFVQAMEDASNVDLSHFRRWYSQSGTPIVTV
+ KDDYNPETEQYTLTISQRTPATADQAEKQPLHIPFAIELYDNEGNVIPLQKGGHPVNA
+ VLNVTQAEQTFTFDNVYFQPVPALLCEFSAPVKLEYKWSDQQLTFLMRHARNDFSRWD
+ AAQSLLATYIKLNVARHQQGQPLSLPVHVADAFRAVLLDEKIDPALAAEILTLPSANE
+ IAELFDVIDPIAIAQVREALTRTLAAELADEFLAIYNANYLDEYRIDHGDIGKRTLRN
+ ACLRFLAFGETELANTLVSKQYRDANNMTDALAALSAAVAAQLPCRDTLMREYDDKWH
+ QDGLVMDKWFILQSTSPAENVLETVRGLLKHRSFSMSNPNRIRSLIGAFAGSNPAAFH
+ AEDGSGYQFLVEMLTDLNSRNPQVASRLIEPLIRLKRYDDKRQEKMRAALEQLKGLEN
+ LSGDLYEKITKALA"
+ misc_feature complement(1877624..1880233)
+ /gene="pepN"
+ /locus_tag="SARI_01952"
+ /note="aminopeptidase N; Provisional; Region: pepN;
+ PRK14015"
+ /db_xref="CDD:237585"
+ misc_feature complement(1877627..1880200)
+ /gene="pepN"
+ /locus_tag="SARI_01952"
+ /note="Peptidase M1 family containing Aminopeptidase N;
+ Region: M1_APN_1; cd09600"
+ /db_xref="CDD:189007"
+ misc_feature complement(order(1877771..1877773,1879091..1879093,
+ 1879106..1879108,1879115..1879117,1879274..1879279,
+ 1879331..1879333,1879340..1879345,1879352..1879357,
+ 1879442..1879456,1879868..1879873,1879877..1879879))
+ /gene="pepN"
+ /locus_tag="SARI_01952"
+ /note="active site"
+ /db_xref="CDD:189007"
+ misc_feature complement(order(1879274..1879276,1879331..1879333,
+ 1879343..1879345))
+ /gene="pepN"
+ /locus_tag="SARI_01952"
+ /note="Zn binding site [ion binding]; other site"
+ /db_xref="CDD:189007"
+ gene complement(1880602..1880862)
+ /locus_tag="SARI_01953"
+ CDS complement(1880602..1880862)
+ /locus_tag="SARI_01953"
+ /inference="similar to AA sequence:INSD:"
+ /note="'KEGG: sty:STY2205 6.6e-21 umuC; UmuC protein
+ K03502;
+ COG: COG0389 Nucleotidyltransferase/DNA polymerase
+ involved in DNA repair;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570977.1"
+ /db_xref="GI:161503865"
+ /translation="MIGEDPLGGFFSQGVVQLNLFDDNAPRAGSEKLMEVLDHLNAKE
+ GRGILISLGEGIQQQLAMKRDMRSSRILPAMKTCFRLSDRFN"
+ misc_feature complement(1880653..1880844)
+ /locus_tag="SARI_01953"
+ /note="Domain of unknown function (DUF4113); Region:
+ DUF4113; pfam13438"
+ /db_xref="CDD:222129"
+ gene 1880920..1881393
+ /locus_tag="SARI_01954"
+ CDS 1880920..1881393
+ /locus_tag="SARI_01954"
+ /inference="protein motif:HMMPfam:IPR010637"
+ /inference="similar to AA sequence:REFSEQ:NP_460026.1"
+ /note="'COG: COG4886 Leucine-rich repeat (LRR) protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570978.1"
+ /db_xref="GI:161503866"
+ /db_xref="InterPro:IPR010637"
+ /translation="MFVGTIVVAQIHLLSEVTMPFYVGSNCFPACISKKKISDILNSD
+ TLPKMSLWDKFKEFFFSTHQAEAQNCLYRICHPSPGTTPDDVRRLFERLKELAYPGYA
+ DNIQCYRYGGKSFCIMDNNGDELLSASFGDDYTVTTGTRGAFFADGTTRSYSLHP"
+ misc_feature 1881064..>1881327
+ /locus_tag="SARI_01954"
+ /note="pathogenicity island 2 effector protein SseI;
+ Provisional; Region: PRK15372"
+ /db_xref="CDD:185270"
+ gene complement(1881623..1881781)
+ /locus_tag="SARI_01955"
+ CDS complement(1881623..1881781)
+ /locus_tag="SARI_01955"
+ /inference="protein motif:HMMPfam:IPR003458"
+ /inference="similar to AA sequence:REFSEQ:YP_215990.1"
+ /note="'COG: COG5525 Bacteriophage tail assembly protein;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570979.1"
+ /db_xref="GI:161503867"
+ /db_xref="InterPro:IPR003458"
+ /translation="MKDESAEAAARLCESEETKSCLLQMASGKIAPLQDAVAPGIATD
+ DKKARLDM"
+ misc_feature complement(<1881632..>1881772)
+ /locus_tag="SARI_01955"
+ /note="Caudovirales tail fibre assembly protein; Region:
+ Caudo_TAP; pfam02413"
+ /db_xref="CDD:217022"
+ gene complement(1881781..1882112)
+ /locus_tag="SARI_01956"
+ /note="Pseudogene compared to gi|16764410|ref|NP_460025.1|
+ tail fiber assembly like-protein [Phage Gifsy-2]"
+ gene 1882598..1883800
+ /locus_tag="SARI_01957"
+ CDS 1882598..1883800
+ /locus_tag="SARI_01957"
+ /inference="protein motif:HMMPanther:IPR007229"
+ /inference="protein motif:HMMPfam:IPR007229"
+ /inference="protein motif:HMMPIR:IPR006406"
+ /inference="protein motif:HMMTigr:IPR006406"
+ /inference="protein motif:superfamily:IPR008967"
+ /inference="similar to AA sequence:SwissProt:Q5PGD8"
+ /note="catalyzes the formation of nictonate and
+ 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate
+ D-ribonucleotide and diphosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="nicotinate phosphoribosyltransferase"
+ /protein_id="YP_001570980.1"
+ /db_xref="GI:161503868"
+ /db_xref="InterPro:IPR006406"
+ /db_xref="InterPro:IPR007229"
+ /db_xref="InterPro:IPR008967"
+ /translation="MTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVQVAAEFRCRGD
+ DLLGIYADAIREQVDAMQHLRLQEDEFQWLSGLPFFKTDYLDWLREFRYDPAQVCVTN
+ DNGKLNIRLTGPWREVIMWEVPLLAVISELVHHYRSPKAGVDQALDALESKLVDFTAL
+ TADLDMSRFHLMDFGTRRRFSREVQQTIVKRLQQEPWFVGTSNYDLARRLALMPMGTQ
+ AHEWFQAHQQISPDLATSQRAALAAWLNEYPDQLGIALTDCITMDAFLRDFGVEFASH
+ YQGLRHDSGDPVEWGEKAIAHYEKLGIDPMTKTLVFSDNLDLQKAVELYRHFASRVQL
+ SFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFD
+ LPQVRKAS"
+ misc_feature 1882619..1883779
+ /locus_tag="SARI_01957"
+ /note="nicotinate phosphoribosyltransferase; Region:
+ NAPRTase; TIGR01514"
+ /db_xref="CDD:130578"
+ misc_feature 1882625..1883725
+ /locus_tag="SARI_01957"
+ /note="Nicotinate phosphoribosyltransferase (NAPRTase),
+ related to PncB. Nicotinate phosphoribosyltransferase
+ catalyses the formation of NAMN and PPi from
+ 5-phosphoribosy -1-pyrophosphate (PRPP) and nicotinic
+ acid, this is the first, and also rate limiting; Region:
+ PncB_like; cd01401"
+ /db_xref="CDD:238695"
+ misc_feature order(1883123..1883131,1883198..1883203,1883444..1883446,
+ 1883534..1883539,1883606..1883608,1883612..1883617,
+ 1883624..1883626)
+ /locus_tag="SARI_01957"
+ /note="active site"
+ /db_xref="CDD:238695"
+ gene 1883969..1885369
+ /gene="asnC"
+ /locus_tag="SARI_01958"
+ CDS 1883969..1885369
+ /gene="asnC"
+ /locus_tag="SARI_01958"
+ /inference="protein motif:Gene3D:IPR012340"
+ /inference="protein motif:HMMPfam:IPR004364"
+ /inference="protein motif:HMMPfam:IPR004365"
+ /inference="protein motif:HMMTigr:IPR004522"
+ /inference="protein motif:superfamily:IPR008994"
+ /inference="similar to AA sequence:REFSEQ:NP_455486.1"
+ /note="'catalyzes a two-step reaction, first charging an
+ asparagine molecule by linking its carboxyl group to the
+ alpha-phosphate of ATP, followed by transfer of the
+ aminoacyl-adenylate to its tRNA'"
+ /codon_start=1
+ /transl_table=11
+ /product="asparaginyl-tRNA synthetase"
+ /protein_id="YP_001570981.2"
+ /db_xref="GI:448236248"
+ /db_xref="InterPro:IPR004364"
+ /db_xref="InterPro:IPR004365"
+ /db_xref="InterPro:IPR004522"
+ /db_xref="InterPro:IPR008994"
+ /db_xref="InterPro:IPR012340"
+ /translation="MSVVPVADVLQGRVAVDQEVTVRGWVRTRRDSKAGISFLAVYDG
+ SCFDPVQAVINNSLPNYNEEVLHLTAGCSVVVTGKVVASPGQGQSFEIQATKVEVAGW
+ VEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWV
+ STPLITASDTEGAGEMFRVSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGET
+ YACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFADLEDNARLAEAMLKYVFKA
+ VLEERADDMKFFAERVDKDAIARLERFVSTDFAQVDYTDAVAILARCGKKFENPVFWG
+ VDLSSEHERYLAEEHFKAPVVVKNYPKEIKAFYMRLNGDGKTVAAMDVLAPGIGEIIG
+ GSQREERLDVLDARMAEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQN
+ VRDVIPFPRTPRNASF"
+ misc_feature 1883969..1885366
+ /gene="asnC"
+ /locus_tag="SARI_01958"
+ /note="asparaginyl-tRNA synthetase; Validated; Region:
+ asnC; PRK03932"
+ /db_xref="CDD:235176"
+ misc_feature 1884023..1884274
+ /gene="asnC"
+ /locus_tag="SARI_01958"
+ /note="EcAsnRS_like_N: N-terminal, anticodon recognition
+ domain of the type found in Escherichia coli
+ asparaginyl-tRNA synthetase (AsnRS) and, in Arabidopsis
+ thaliana and Saccharomyces cerevisiae mitochondrial (mt)
+ AsnRS. This domain is a beta-barrel domain (OB...; Region:
+ EcAsnRS_like_N; cd04318"
+ /db_xref="CDD:239813"
+ misc_feature order(1884041..1884043,1884098..1884100,1884185..1884187,
+ 1884269..1884271)
+ /gene="asnC"
+ /locus_tag="SARI_01958"
+ /note="putative dimer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:239813"
+ misc_feature order(1884050..1884052,1884056..1884061,1884080..1884082,
+ 1884119..1884121,1884125..1884127,1884173..1884175,
+ 1884215..1884217,1884239..1884241)
+ /gene="asnC"
+ /locus_tag="SARI_01958"
+ /note="putative anticodon binding site; other site"
+ /db_xref="CDD:239813"
+ misc_feature 1884311..1885354
+ /gene="asnC"
+ /locus_tag="SARI_01958"
+ /note="Asx tRNA synthetase (AspRS/AsnRS) class II core
+ domain. Assignment to class II aminoacyl-tRNA synthetases
+ (aaRS) based upon its structure and the presence of three
+ characteristic sequence motifs in the core domain. This
+ family includes AsnRS as well as...; Region: AsxRS_core;
+ cd00776"
+ /db_xref="CDD:238399"
+ misc_feature order(1884338..1884340,1884344..1884346,1884356..1884358,
+ 1884371..1884373,1884389..1884394,1884401..1884403,
+ 1884413..1884415,1884434..1884436,1884443..1884445,
+ 1884449..1884451,1884455..1884463,1884467..1884469,
+ 1884560..1884565,1884569..1884577,1884611..1884613,
+ 1884620..1884622,1884629..1884640,1884701..1884706,
+ 1884731..1884736,1884749..1884751,1885232..1885234,
+ 1885241..1885252,1885343..1885351)
+ /gene="asnC"
+ /locus_tag="SARI_01958"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238399"
+ misc_feature 1884455..1884469
+ /gene="asnC"
+ /locus_tag="SARI_01958"
+ /note="motif 1; other site"
+ /db_xref="CDD:238399"
+ misc_feature 1884665..1884676
+ /gene="asnC"
+ /locus_tag="SARI_01958"
+ /note="motif 2; other site"
+ /db_xref="CDD:238399"
+ misc_feature order(1884668..1884670,1884674..1884676,1884692..1884697,
+ 1885133..1885135,1885142..1885144,1885277..1885279,
+ 1885286..1885288)
+ /gene="asnC"
+ /locus_tag="SARI_01958"
+ /note="active site"
+ /db_xref="CDD:238399"
+ misc_feature 1885277..1885288
+ /gene="asnC"
+ /locus_tag="SARI_01958"
+ /note="motif 3; other site"
+ /db_xref="CDD:238399"
+ unsure 1884224..1884253
+ /gene="asnC"
+ /locus_tag="SARI_01958"
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(1885419..1885790)
+ /locus_tag="SARI_01959"
+ CDS complement(1885419..1885790)
+ /locus_tag="SARI_01959"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:REFSEQ:NP_418698.1"
+ /note="'COG: COG3385 FOG: Transposase and inactivated
+ derivatives;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570982.1"
+ /db_xref="GI:161503870"
+ /db_xref="InterPro:IPR012337"
+ /translation="MKQTMQQSRLTLRSKKPELVEQELWGVLLAYNLMRYQMIKMAGH
+ LKGYWPNHLSFSESCGMVMRMLMTLQGASPGRIPELMRALESMGQLVKLPTRRERAFP
+ RVAKERPWRYPTAPKKGQSVA"
+ gene complement(1885787..1885915)
+ /locus_tag="SARI_01960"
+ CDS complement(1885787..1885915)
+ /locus_tag="SARI_01960"
+ /inference="similar to AA sequence:REFSEQ:ZP_00697684.1"
+ /note="'COG: COG3385 FOG: Transposase and inactivated
+ derivatives;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570983.1"
+ /db_xref="GI:161503871"
+ /translation="MHTGQALDLVSRYDSLRNPLTSLRDYLDPELISRCLNWDTGR"
+ gene 1886585..1887676
+ /locus_tag="SARI_01961"
+ CDS 1886585..1887676
+ /locus_tag="SARI_01961"
+ /inference="protein motif:FPrintScan:IPR001702"
+ /inference="protein motif:FPrintScan:IPR001897"
+ /inference="protein motif:HMMPfam:IPR001702"
+ /inference="protein motif:ScanRegExp:IPR013793"
+ /inference="similar to AA sequence:INSD:CAD05399.1"
+ /note="'COG: COG3203 Outer membrane protein (porin);
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570984.1"
+ /db_xref="GI:161503872"
+ /db_xref="InterPro:IPR001702"
+ /db_xref="InterPro:IPR001897"
+ /db_xref="InterPro:IPR013793"
+ /translation="MMKRKILAAVIPALLAAATANAAEIYNKDGNKLDLYGKAVGRHV
+ WTTTGDSKNADQTYAQIGFKGETQINTDLTGFGQWEYRTKADRAEGEQQNSNLVRLAF
+ AGLKYAEVGSIDYGRNYGIVYDVESYTDMAPYFSGETWGGAYTDNYMTSRAGGLLTYR
+ NSDFFGLVDGLSFGIQYQGKNQDNHSINSQNGDGVGYTMAYEFDGFGVTAAYSNSKRT
+ NDQQDRDGNGDRAESWAVGAKYDANNVYLAAVYAETRNMSIVENTVTDTVEMANKTQN
+ LEVVAQYQFDFGLRPAISYVQSKGKQLNGADSTADLAKYIQAGATYYFNKNMNVWVDY
+ RFNLLDKNDYSSSYVGTDDQAAVGITYQF"
+ misc_feature 1886660..1887673
+ /locus_tag="SARI_01961"
+ /note="Outer membrane protein (porin) [Cell envelope
+ biogenesis, outer membrane]; Region: OmpC; COG3203"
+ /db_xref="CDD:225744"
+ misc_feature 1886675..1887673
+ /locus_tag="SARI_01961"
+ /note="Porins form aqueous channels for the diffusion of
+ small hydrophillic molecules across the outer membrane.
+ Individual 16-strand anti-parallel beta-barrels form a
+ central pore, and trimerizes thru mainly hydrophobic
+ interactions at the interface. Trimers...; Region:
+ gram_neg_porins; cd00342"
+ /db_xref="CDD:238208"
+ misc_feature order(1886675..1886677,1886681..1886683,1886699..1886701,
+ 1886705..1886713,1886777..1886791,1886807..1886809,
+ 1886813..1886821,1886825..1886827,1886831..1886842,
+ 1886876..1886881,1886885..1886899,1886927..1886935,
+ 1887038..1887040,1887044..1887049,1887554..1887559,
+ 1887566..1887568,1887659..1887661,1887665..1887667,
+ 1887671..1887673)
+ /locus_tag="SARI_01961"
+ /note="trimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238208"
+ misc_feature order(1886696..1886698,1886762..1886764,1886879..1886881,
+ 1886972..1886974,1887038..1887040)
+ /locus_tag="SARI_01961"
+ /note="eyelet of channel; other site"
+ /db_xref="CDD:238208"
+ unsure 1886821..1887094
+ /locus_tag="SARI_01961"
+ /note="Sequence derived from one plasmid subclone"
+ gene 1887861..1889051
+ /locus_tag="SARI_01962"
+ CDS 1887861..1889051
+ /locus_tag="SARI_01962"
+ /inference="protein motif:HMMPanther:IPR000796"
+ /inference="protein motif:HMMPfam:IPR004839"
+ /inference="protein motif:ScanRegExp:IPR004838"
+ /inference="similar to AA sequence:INSD:CAD05398.1"
+ /note="catalyzes the formation of L-glutamate and an
+ aromatic oxo acid from an aromatic amino acid and
+ 2-oxoglutarate"
+ /codon_start=1
+ /transl_table=11
+ /product="aromatic amino acid aminotransferase"
+ /protein_id="YP_001570985.1"
+ /db_xref="GI:161503873"
+ /db_xref="InterPro:IPR000796"
+ /db_xref="InterPro:IPR004838"
+ /db_xref="InterPro:IPR004839"
+ /translation="MFENITAAPADPILGLADLFRADDRPGKINLGIGVYKDETGKTP
+ VLTSVKKAEQYLLENETTKNYLGIDGIPEFARCTQELLFGKGSALINDKRARTAQTPG
+ GTGALRVAADFLAKNTPVKRVWVSNPSWPNHKSVFNSAGLEVREYNYYDAANHSLDFD
+ ALLASLSEAHAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFA
+ RGLEEDAEGLRAFVALHKELIVASSYSKNFGLYNERVGACTLVAADAETVDCAFSQMK
+ SAIRANYSNPPAHGASIVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGA
+ NRDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI
+ VAVL"
+ misc_feature 1887861..1889048
+ /locus_tag="SARI_01962"
+ /note="aromatic amino acid aminotransferase; Provisional;
+ Region: PRK09257"
+ /db_xref="CDD:181731"
+ misc_feature 1887945..1889036
+ /locus_tag="SARI_01962"
+ /note="Aspartate aminotransferase family. This family
+ belongs to pyridoxal phosphate (PLP)-dependent aspartate
+ aminotransferase superfamily (fold I). Pyridoxal phosphate
+ combines with an alpha-amino acid to form a compound
+ called a Schiff base or aldimine...; Region: AAT_like;
+ cd00609"
+ /db_xref="CDD:99734"
+ misc_feature order(1888164..1888172,1888248..1888250,1888407..1888409,
+ 1888500..1888502,1888587..1888589,1888593..1888598,
+ 1888620..1888622)
+ /locus_tag="SARI_01962"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:99734"
+ misc_feature order(1888173..1888175,1888278..1888280,1888479..1888481,
+ 1888614..1888622,1888728..1888730,1888737..1888739)
+ /locus_tag="SARI_01962"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99734"
+ misc_feature 1888596..1888598
+ /locus_tag="SARI_01962"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:99734"
+ unsure 1889080..1889118
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(1889114..1889761)
+ /locus_tag="SARI_01963"
+ CDS complement(1889114..1889761)
+ /locus_tag="SARI_01963"
+ /inference="protein motif:HMMPfam:IPR001279"
+ /inference="similar to AA sequence:INSD:AAL19931.1"
+ /note="'KEGG: eci:UTI89_C0999 9.6e-111 ycbL; hypothetical
+ protein K01069;
+ COG: COG0491 Zn-dependent hydrolases, including
+ glyoxylases;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570986.1"
+ /db_xref="GI:161503874"
+ /db_xref="InterPro:IPR001279"
+ /translation="MNYRIIPVTAFSQNCSLIWCEQTRLAALVDPGGDAEKIKQEVDA
+ SGVTLMQILLTHGHLDHVGAASELAQHYGVPVIGPEKEDEFWLQGLPAQSRMFGLDEC
+ QPLTPDRWLSEGDRISVGNVNLQVLHCPGHTPGHVVFFDEQSQLLISGDVIFKGGVGR
+ SDFPRGDHNQLIDVIKRKLLPLGDDVTFIPGHGPLSTLGYERLHNPFLQDEVPVW"
+ misc_feature complement(1889117..1889761)
+ /locus_tag="SARI_01963"
+ /note="Zn-dependent hydrolases, including glyoxylases
+ [General function prediction only]; Region: GloB; COG0491"
+ /db_xref="CDD:223565"
+ gene complement(1889789..1890337)
+ /locus_tag="SARI_01964"
+ CDS complement(1889789..1890337)
+ /locus_tag="SARI_01964"
+ /inference="protein motif:HMMPfam:IPR010275"
+ /inference="protein motif:superfamily:IPR009045"
+ /inference="similar to AA sequence:INSD:AAV77718.1"
+ /note="'COG: COG3108 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570987.1"
+ /db_xref="GI:161503875"
+ /db_xref="InterPro:IPR009045"
+ /db_xref="InterPro:IPR010275"
+ /translation="MDKFDANRRKLLALGGVALGAAILPAPAFATLSTPRPRILTLNN
+ LHTGESIKAEFFDGRAYIQDELAKLNHFFRDYRANKVRSIDPRLFDQLYRLQGLLGTR
+ KPVQLISGYRSLDTNNELRARSSGVAKKSYHTKGQAMDFHIEGVALSNIHKAALSMGA
+ GGVGYYPRSNFVHIDTGPARHW"
+ misc_feature complement(1889792..1890337)
+ /locus_tag="SARI_01964"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG3108"
+ /db_xref="CDD:225650"
+ misc_feature complement(1889792..1890241)
+ /locus_tag="SARI_01964"
+ /note="Peptidase M15; Region: Peptidase_M15_3; cl01194"
+ /db_xref="CDD:242357"
+ gene complement(1890596..1892530)
+ /locus_tag="SARI_01965"
+ CDS complement(1890596..1892530)
+ /locus_tag="SARI_01965"
+ /inference="protein motif:Gene3D:IPR002477"
+ /inference="protein motif:HMMPfam:IPR002477"
+ /inference="protein motif:ScanRegExp:IPR002052"
+ /inference="protein motif:superfamily:IPR009070"
+ /note="'COG: COG2989 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570988.1"
+ /db_xref="GI:161503876"
+ /db_xref="InterPro:IPR002052"
+ /db_xref="InterPro:IPR002477"
+ /db_xref="InterPro:IPR009070"
+ /translation="MVEVDPRRGQHAHAEYDNKNRGQGMLLNKMCGRRLSAISLCLAV
+ TFAPLFNAQADEPAMIPGDSSAAAIGQAGALAQPQKQSAATAILAGIQPLQEGVSAEK
+ VRADIRSQLPSGYTPVYMSQLTLLYAAHDMKPMWENRDAVKAFQQQLAEVAIAGFQPQ
+ FTAWVALLTDPAVNGMARDVVLSDAMMGYLHFIANIPVKGNRWLYSNKPYVLATPPVS
+ VINQWQIALEEGQLPTFVASLAPQNPQYAPMHEALLKLVADSRPWPQLTNTATLRPGQ
+ WSNDVPALREILQRTGMLDGGPKIALPGDDTSDSAVVSPSAVEVETLVAQPVAEQTAR
+ RSKPAPAVRAAYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNI
+ QRLRLLPAELSTGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVV
+ NPPWNVPPTLARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNL
+ PFRFQQAPGARNSLGRYKFNMPSSDAIYLHDTPNHNLFQRDARALSSGCVRVNKAPEL
+ ANMLLQDAGWNDARISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYN
+ YDLTARSSAQIVPKVEQLIR"
+ misc_feature complement(1890599..1892458)
+ /locus_tag="SARI_01965"
+ /note="murein L,D-transpeptidase; Provisional; Region:
+ PRK10594"
+ /db_xref="CDD:236723"
+ misc_feature complement(1891400..>1891495)
+ /locus_tag="SARI_01965"
+ /note="Putative peptidoglycan binding domain; Region:
+ PG_binding_1; pfam01471"
+ /db_xref="CDD:216518"
+ misc_feature complement(<1891205..1891315)
+ /locus_tag="SARI_01965"
+ /note="L,D-transpeptidase catalytic domain; Region: YkuD;
+ pfam03734"
+ /db_xref="CDD:217702"
+ misc_feature complement(1890818..>1890928)
+ /locus_tag="SARI_01965"
+ /note="L,D-transpeptidase catalytic domain; Region: YkuD;
+ pfam03734"
+ /db_xref="CDD:217702"
+ gene complement(1892644..1892775)
+ /locus_tag="SARI_01967"
+ CDS complement(1892644..1892775)
+ /locus_tag="SARI_01967"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570989.1"
+ /db_xref="GI:161503878"
+ /translation="MEIIADCRSDKAFTPPSGKINSALSSGMGGESRLFLYPKILSG"
+ gene 1892693..1892800
+ /locus_tag="SARI_01966"
+ CDS 1892693..1892800
+ /locus_tag="SARI_01966"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570990.1"
+ /db_xref="GI:161503877"
+ /translation="MPDDKAEFILPDGGVNALSDLQSAIISILQEIIQA"
+ gene complement(1892842..1897308)
+ /gene="mukB"
+ /locus_tag="SARI_01968"
+ CDS complement(1892842..1897308)
+ /gene="mukB"
+ /locus_tag="SARI_01968"
+ /inference="protein motif:HMMPfam:IPR007406"
+ /inference="protein motif:HMMPIR:IPR012090"
+ /inference="protein motif:superfamily:IPR009053"
+ /note="SMC (structural maintenance of chromosomes) family
+ of proteins; involved in chromosome condensatin and
+ partitioning; forms a homodimer and the C-terminal is
+ essential for DNA-binding activity while the purified
+ N-terminal domain binds FtsZ; mutations result in cell
+ division defects"
+ /codon_start=1
+ /transl_table=11
+ /product="cell division protein MukB"
+ /protein_id="YP_001570991.1"
+ /db_xref="GI:161503879"
+ /db_xref="InterPro:IPR007406"
+ /db_xref="InterPro:IPR009053"
+ /db_xref="InterPro:IPR012090"
+ /translation="MIERGKFRSLTLINWNGFFARTFDLDELVTTLSGGNGAGKSTTM
+ AAFVTALIPDLTLLHFRNTTEAGATSGSRDKGLHGKLKAGVCYSMLDTINSRHQRVVV
+ GVRLQQVAGRDRKVDIKPFAIQGLPMSVQPTQLVTETLNERQARVLSLAELKDKLDEM
+ EGVQFKQFNSITDYHSLMFDLGIIARRLRSASDRSKFYRLIEASLYGGISSAITRSLR
+ DYLLPENSGVRKAFQDMEAALRENRLTLEAIRVTQSDRDLFKHLISEATDYVAADYMR
+ HANERRVHLDQALAFRRELYTSRKQLAAEQYKHVDMARELGEHNGAEGSLEADYQAAS
+ DHLNLVQTALRQQEKIERYEADLEELQIRLEEQNEVVAEAAEMQEENEARAEAAELEV
+ DELKSQLADYQQALDVQQTRAIQYNQAISALARARELCHLPDLTPESAAEWLDTFQAK
+ EQEATEKLLSLEQKMSVAQTAHSQFEQAYQLVAAINGPLARGEAWDVARELLRDGVNQ
+ RHLAEQVQPLRMRLSELEQRLREQQEAERLLAEFCKRQGKNFDIDELEALHQELEARI
+ AALSDSVANASEQRLALRQEQEQLQSRIQHLMQRAPVWLAAQNSLNQLSEQCGEAFSS
+ SQEVTEYLQQLLEREREAIVERDEVGARKNAVDEEIERLSQPGGAEDQRLNTLAERFG
+ GVLLSEIYDDVSLEDAPYFSALYGPSRHAIVVPDLSQIAEQLEGLTDCPEDLYLIEGD
+ PQSFDDSVFSVDELEKAVVVKIADRQWRYSRFPSLPIFGRAARENRIESLHAEREVLS
+ ERFATLSFDVQKTQRLHQAFSRFIGSHLSVAFEDDPEAEIRRLNGRRVELERALATHE
+ NDNQQQRLQFEQAKEGVSALNRLLPRLNLLADETLADRVDEIQERLDEAQEAARFVQQ
+ YGNQLAKLEPVVSVLQSDPEQFEQLKEDYAWSQQMQRDARQQAFALAEVVERRAHFSY
+ SDSAEMLSGNSDLNEKLRQRLEQAEAERTRAREALRSHASQLSQYSQVLASLKSSYDT
+ KKELLNDLQRELQDIGVRADSGAEERARQRRDELHAQLSNNRSRRNQLEKALTFCEAE
+ MDNLTRKLRKLERDYHEMREQVVTAKAGWCAVMRMVKDNGVERRLHRRELAYLSADEL
+ RSMSDKALGALRLAVADNEHLRDVLRLSEDPKRPERKIQFFVAVYQHLRERIRQDIIR
+ TDDPVEAIEQMEIELSRLTEELTSREQKLAISSRSVANIIRKTIQREQNRIRMLNQGL
+ QSVSFGQVNSVRLNVNVRETHATLLDVLSEQQEQHQDLFNSNRLTFSEALAKLYQRLN
+ PQIDMGQRTPQTIGEELLDYRNYLEMEVEVNRGSDGWLRAESGALSTGEAIGTGMSIL
+ VMVVQSWEDEARRLRGKDISPCRLLFLDEAARLDARSIATLFELCERLQMQLIIAAPE
+ NISPEKGTTYKLVRKVFQNTEHVHVVGLRGFAPQLPETLPGTQTEDTPSEAS"
+ misc_feature complement(1892878..1897308)
+ /gene="mukB"
+ /locus_tag="SARI_01968"
+ /note="Uncharacterized protein involved in chromosome
+ partitioning [Cell division and chromosome partitioning];
+ Region: MukB; COG3096"
+ /db_xref="CDD:225638"
+ misc_feature complement(1896628..1897308)
+ /gene="mukB"
+ /locus_tag="SARI_01968"
+ /note="P-loop containing region of AAA domain; Region:
+ AAA_29; cl17516"
+ /db_xref="CDD:248070"
+ misc_feature complement(1893034..1893279)
+ /gene="mukB"
+ /locus_tag="SARI_01968"
+ /note="Putative exonuclease SbcCD, C subunit; Region:
+ SbcCD_C; pfam13558"
+ /db_xref="CDD:222219"
+ gene complement(1897308..1898012)
+ /locus_tag="SARI_01969"
+ CDS complement(1897308..1898012)
+ /locus_tag="SARI_01969"
+ /inference="protein motif:HMMPfam:IPR007385"
+ /inference="similar to AA sequence:REFSEQ:YP_215938.1"
+ /note="acts with MukB and MukF to condense the chromosome
+ and allow for segregation during cell division"
+ /codon_start=1
+ /transl_table=11
+ /product="condesin subunit E"
+ /protein_id="YP_001570992.1"
+ /db_xref="GI:161503880"
+ /db_xref="InterPro:IPR007385"
+ /translation="MSLTNIEQVMPVKLAQALANPLFPALDSALRAGRHIGLDELDNH
+ AFLMDFQEYLEEFYARYNVELIRAPEGFFYLRPRSTTLIPRSVLSELDMMVGKILCYL
+ YLSPERLANEGIFTQQELYDELLTLADEAKLLKLVNNRSTGSDVDRQKLQEKVRSSLN
+ RLRRLGMVWFMGHDSSKFRITESVFRFGADVRTGDDPREAQRRLIRDGEAMPIENHLQ
+ LNDETEENQPDSGEDE"
+ misc_feature complement(1897311..1898012)
+ /locus_tag="SARI_01969"
+ /note="condesin subunit E; Provisional; Region: PRK05256"
+ /db_xref="CDD:235378"
+ gene complement(1897993..1899315)
+ /locus_tag="SARI_01970"
+ CDS complement(1897993..1899315)
+ /locus_tag="SARI_01970"
+ /inference="protein motif:HMMPfam:IPR005582"
+ /inference="protein motif:superfamily:IPR010989"
+ /inference="similar to AA sequence:INSD:AAX64856.1"
+ /note="acts with MukB and MukE to condense the chromosome
+ and allow for segregation during cell division"
+ /codon_start=1
+ /transl_table=11
+ /product="condesin subunit F"
+ /protein_id="YP_001570993.1"
+ /db_xref="GI:161503881"
+ /db_xref="InterPro:IPR005582"
+ /db_xref="InterPro:IPR010989"
+ /translation="MSEISQTVPELVAWARKNDFSISLPVDRLSFLLAVATLNGERLD
+ GEMSEGELVDAFRHVSDAFEQTSETIGVRANNAINEMVRQRLLNRFTSEQAEGNAIYR
+ LTPLGIGITDYYIRQREFSTLRLSMQLSIVAGELKRAADAAQEGGDEFHWHRNVYAPL
+ KYSVAEIFDSIDLTQRIMDEQQQQVKDDIAQLLNKDWRAAISSCELLLSETSGTLREL
+ QDTLEAAGDKLQANLLRIQDATMSHDDLHFVDRLVFDLQSKLDRIISWGQQSIDLWIG
+ YDRHVHKFIRTAIDMDKNRVFAQRLRQSVQTYFDDPWALTYASADRLLDMRDEEMALR
+ DDEVTGELPPDLEYEEFNEIREQLAAIIEEQLAIYKTRQTPLDLGLVVREYLAQYPRA
+ RHFDVARIVIDQAVRLGVAQADFTGLPAKWQPINDYGAKVQAHVIDKY"
+ misc_feature complement(1897996..1899315)
+ /locus_tag="SARI_01970"
+ /note="condesin subunit F; Provisional; Region: PRK05260"
+ /db_xref="CDD:179980"
+ gene complement(1899308..1900111)
+ /locus_tag="SARI_01971"
+ CDS complement(1899308..1900111)
+ /locus_tag="SARI_01971"
+ /inference="protein motif:HMMPfam:IPR013216"
+ /inference="similar to AA sequence:REFSEQ:NP_455477.1"
+ /note="involved in cellular zinc and cadmium homeostasis
+ by binding excess metal ions to its cysteine sulfurs and
+ histidine nitrogens; expression of smtA in cyanobacteria
+ is repressed by SmtB at low concentrations of zinc; NO
+ elicits release of Zn ions from SmtA"
+ /codon_start=1
+ /transl_table=11
+ /product="putative metallothionein SmtA"
+ /protein_id="YP_001570994.1"
+ /db_xref="GI:161503882"
+ /db_xref="InterPro:IPR013216"
+ /translation="MQDRNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDRVLEEIGGR
+ KLRVLDAGGGEGQTAIKMAERGHQVTLCDLSGEMIARAQQAAEAKGVSKDMHFIQCPA
+ QNVASHLESPVDLILFHAVLEWVADPVGVLETLWSVLRPGGALSLMFYNANGLLMHNM
+ VAGNFDYVQAGMPKRKKRTLSPDYPRDPAQVYQWLEAIGWQITGKTGVRVFHDYLREK
+ RQQRDCYETLVELETRYCRQEPYISLGRYIHVTAIKSPALAADARITYE"
+ misc_feature complement(1899362..1900111)
+ /locus_tag="SARI_01971"
+ /note="SAM-dependent methyltransferases [Secondary
+ metabolites biosynthesis, transport, and catabolism /
+ General function prediction only]; Region: SmtA; COG0500"
+ /db_xref="CDD:223574"
+ misc_feature complement(1899662..1899973)
+ /locus_tag="SARI_01971"
+ /note="S-adenosylmethionine-dependent methyltransferases
+ (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
+ that use S-adenosyl-L-methionine (SAM or AdoMet) as a
+ substrate for methyltransfer, creating the product
+ S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
+ cd02440"
+ /db_xref="CDD:100107"
+ misc_feature complement(order(1899755..1899757,1899806..1899814,
+ 1899890..1899895,1899941..1899961))
+ /locus_tag="SARI_01971"
+ /note="S-adenosylmethionine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:100107"
+ gene 1900247..1901023
+ /locus_tag="SARI_01972"
+ CDS 1900247..1901023
+ /locus_tag="SARI_01972"
+ /inference="protein motif:HMMPfam:IPR003848"
+ /inference="similar to AA sequence:INSD:CAD05390.1"
+ /note="'COG: COG1434 Uncharacterized conserved protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570995.1"
+ /db_xref="GI:161503883"
+ /db_xref="InterPro:IPR003848"
+ /translation="MLFTLKKVIGGMLLPLPLLLLIIGVGLALIWFSRFQKTGKVFIS
+ VGWLALLLLSLQPVADRLLRPIENSYPTWQGPQKVEYIVVLGGGYTWNPQWAPSSNLI
+ NNSLPRLAEGIRLWRANPGAKLIFTGGVAKTNTVSTAEVGARVAQSLGVPRSDIITLD
+ KPKDTEEEAAAVKQAIGDTPFLLVTSASHLPRAMIFFQHAGLNPLPAPANQLAIDSPL
+ NPWEQAIPSPVWLMHSDRASYEALGRIWQWLKGASGKPGE"
+ misc_feature 1900337..1901002
+ /locus_tag="SARI_01972"
+ /note="Uncharacterized conserved protein [Function
+ unknown]; Region: COG1434"
+ /db_xref="CDD:224351"
+ misc_feature 1900484..1900921
+ /locus_tag="SARI_01972"
+ /note="YdcF-like. YdcF-like is a large family of mainly
+ bacterial proteins, with a few members found in fungi,
+ plants, and archaea. Escherichia coli YdcF has been shown
+ to bind S-adenosyl-L-methionine (AdoMet), but a
+ biochemical function has not been...; Region: YdcF-like;
+ cd06259"
+ /db_xref="CDD:99750"
+ misc_feature order(1900739..1900741,1900748..1900750,1900799..1900801,
+ 1900811..1900813,1900820..1900822)
+ /locus_tag="SARI_01972"
+ /note="putative active site [active]"
+ /db_xref="CDD:99750"
+ gene complement(1901003..1901896)
+ /locus_tag="SARI_01973"
+ CDS complement(1901003..1901896)
+ /locus_tag="SARI_01973"
+ /inference="protein motif:superfamily:IPR011009"
+ /inference="similar to AA sequence:REFSEQ:YP_151037.1"
+ /note="'COG: NOG06195 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570996.1"
+ /db_xref="GI:161503884"
+ /db_xref="InterPro:IPR011009"
+ /translation="MEQLRAELSHLLGEKLSRIECVNEKADSALWSLYDSQGNPMPLM
+ ARSFTTPGVAQQLAWKTSMLARSGTVRMPVIYGVLTHEEHPGPDVLLLERLRGVPVEA
+ PARTPERWEQLKDQIVEGLLAWHRLDSRGCVGAVDHTQENIWSSWYRQRVEVLWTTLN
+ QFSNTGLTMQDKRILFRTRECLPSLFEGFNDNCVLVHGNFCLRSMLKDARSDQLLAMV
+ GPGLMLWAPREFELFRLMDNPLAEGLLWHYLQRAPVAESFIWRRWLYVLWDEVAQLVN
+ TGRFNRTHFDLAAKSLLPWLA"
+ misc_feature complement(1901006..1901896)
+ /locus_tag="SARI_01973"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10593"
+ /db_xref="CDD:182575"
+ gene complement(1902107..1902853)
+ /locus_tag="SARI_01974"
+ CDS complement(1902107..1902853)
+ /locus_tag="SARI_01974"
+ /inference="protein motif:HMMPfam:IPR003329"
+ /inference="protein motif:HMMTigr:IPR004528"
+ /inference="similar to AA sequence:INSD:AAL19922.1"
+ /note="CMP-2-keto-3-deoxyoctulosonic acid synthetase;
+ catalyzes the formation of
+ CMP-3-deoxy-D-manno-octulosonate from CTP and
+ 3-deoxy-D-manno-octulosonate which is incorporated into
+ LPS"
+ /codon_start=1
+ /transl_table=11
+ /product="3-deoxy-manno-octulosonate cytidylyltransferase"
+ /protein_id="YP_001570997.1"
+ /db_xref="GI:161503885"
+ /db_xref="InterPro:IPR003329"
+ /db_xref="InterPro:IPR004528"
+ /translation="MSFVVIIPARFSSTRLPGKPLLDINGKPMIVHVLERARESGAER
+ IIVATDHEDVARAVEAAGGEVCITRADHQSGTERLAEVVEKCGFSDDTVIVNVQGDEP
+ MIPAVIIRQVAENLAQRQVGMATLAAPIHSAEEAFNPNAVKVVLDAEGYALYFSRATI
+ PWDRDRFAKSLETVGDTCLRHLGIYGYRAGFIRRYVSWQPSPLEQIEMLEQLRVLWYG
+ EKIHVAVAKAVPGTGVDTADDLERVRAEMR"
+ misc_feature complement(1902110..1902853)
+ /locus_tag="SARI_01974"
+ /note="3-deoxy-manno-octulosonate cytidylyltransferase;
+ Provisional; Region: PRK05450"
+ /db_xref="CDD:235473"
+ misc_feature complement(1902119..1902850)
+ /locus_tag="SARI_01974"
+ /note="CMP-KDO synthetase catalyzes the activation of KDO
+ which is an essential component of the lipopolysaccharide;
+ Region: CMP-KDO-Synthetase; cd02517"
+ /db_xref="CDD:133010"
+ misc_feature complement(order(1902554..1902556,1902560..1902562,
+ 1902629..1902631,1902710..1902712,1902824..1902832))
+ /locus_tag="SARI_01974"
+ /note="Ligand binding site; other site"
+ /db_xref="CDD:133010"
+ misc_feature complement(order(1902200..1902211,1902230..1902238,
+ 1902245..1902250,1902323..1902325,1902368..1902388,
+ 1902392..1902397,1902413..1902421,1902437..1902439,
+ 1902488..1902490))
+ /locus_tag="SARI_01974"
+ /note="oligomer interface; other site"
+ /db_xref="CDD:133010"
+ gene complement(1902850..1903032)
+ /locus_tag="SARI_01975"
+ CDS complement(1902850..1903032)
+ /locus_tag="SARI_01975"
+ /inference="protein motif:HMMPfam:IPR005651"
+ /inference="similar to AA sequence:REFSEQ:NP_455473.1"
+ /note="'KEGG: net:Neut_2110 1.2e-14 tetraacyldisaccharide
+ 4'-kinase K00912;
+ COG: COG2835 Uncharacterized conserved protein;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001570998.1"
+ /db_xref="GI:161503886"
+ /db_xref="InterPro:IPR005651"
+ /translation="MDHRLLEIIACPVCNGKLWYNQEKQELICKLDNLAFPLRDGIPV
+ LLENEARSLTSDESKS"
+ misc_feature complement(1902853..1903032)
+ /locus_tag="SARI_01975"
+ /note="hypothetical protein; Provisional; Region:
+ PRK11827"
+ /db_xref="CDD:183328"
+ gene complement(1903137..1903735)
+ /locus_tag="SARI_01976"
+ /note="Pseudogene compared to gi|16764346|ref|NP_459961.1|
+ putative cytoplasmic protein [Salmonella typhimurium LT2]"
+ gene complement(1903779..1904756)
+ /gene="lpxK"
+ /locus_tag="SARI_01977"
+ CDS complement(1903779..1904756)
+ /gene="lpxK"
+ /locus_tag="SARI_01977"
+ /inference="protein motif:HMMPfam:IPR003758"
+ /inference="protein motif:HMMTigr:IPR003758"
+ /inference="similar to AA sequence:INSD:CAD05385.1"
+ /note="'transfers the gamma-phosphate of ATP to the 4'
+ position of a tetraacyldisaccharide 1-phosphate
+ intermediate to form tetraacyldisaccharide
+ 1,4'-bis-phosphate'"
+ /codon_start=1
+ /transl_table=11
+ /product="tetraacyldisaccharide 4'-kinase"
+ /protein_id="YP_001570999.1"
+ /db_xref="GI:161503887"
+ /db_xref="InterPro:IPR003758"
+ /translation="MIARIWSGESPLWRLLLPFSWLYGLVSGAIRLSYKLGLKRAWRA
+ PVPVVVVGNLTAGGNGKTPVVIWLVEQLQRRGVRVGVVSRGYGGKAVAYPLLLTPETT
+ TAEAGDEPVLIYQRTGAPVAVAPERAAAVKAILAAHDVQIIITDDGLQHYRLARDIEI
+ VVIDGVRRFGNGWWLPAGPMRERASRLKTVDAAIVNGGVARAGEIPMQLAPGLAVNLR
+ TGARCDVAQLSNIVAMAGIGHPPRFFATLESCGAHPQKCVPLADHQTLAPADVQALVG
+ EGQTLVMTEKDAVKCRAFAEDNWWFLPVDARLSGEKPDKLLEHITSLVR"
+ misc_feature complement(1903791..1904756)
+ /gene="lpxK"
+ /locus_tag="SARI_01977"
+ /note="tetraacyldisaccharide 4'-kinase; Reviewed;
+ Region: lpxK; PRK00652"
+ /db_xref="CDD:234808"
+ misc_feature complement(1903803..1904756)
+ /gene="lpxK"
+ /locus_tag="SARI_01977"
+ /note="Tetraacyldisaccharide-1-P 4'-kinase [Cell
+ envelope biogenesis, outer membrane]; Region: LpxK;
+ COG1663"
+ /db_xref="CDD:224577"
+ gene complement(1904753..1906501)
+ /locus_tag="SARI_01978"
+ CDS complement(1904753..1906501)
+ /locus_tag="SARI_01978"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR001140"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR011917"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:INSD:CAD05384.1"
+ /note="involved in the transport of lipid A across the
+ inner membrane"
+ /codon_start=1
+ /transl_table=11
+ /product="lipid transporter ATP-binding/permease protein"
+ /protein_id="YP_001571000.1"
+ /db_xref="GI:161503888"
+ /db_xref="InterPro:IPR001140"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR011917"
+ /translation="MHNDKDLSTWQTFRRLWPTIAPFKAGLIVAGIALILNAASDTFM
+ LSLLKPLLDDGFGKTDRSVLLWMPLVVIGLMVLRGITSYVSSYCISWVSGKVVMTMRR
+ RLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMM
+ FYYSWQLSIILVVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVL
+ IFGGQEVETKRFDKVSNKMRLQGMKMVSASSISDPVIQLIASLALAFVLYAASFPSVM
+ DSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEKDEGKRV
+ IERATGDLEFRDVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRF
+ YDIDEGHILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQI
+ EEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQRQRIAIARALLRDSPILILDEAT
+ SALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHSELL
+ AQHGVYAQLHKMQFGQ"
+ misc_feature complement(1904756..1906501)
+ /locus_tag="SARI_01978"
+ /note="lipid transporter ATP-binding/permease protein;
+ Provisional; Region: PRK11176"
+ /db_xref="CDD:183016"
+ misc_feature complement(1905608..1906423)
+ /locus_tag="SARI_01978"
+ /note="ABC transporter transmembrane region; Region:
+ ABC_membrane; pfam00664"
+ /db_xref="CDD:216049"
+ misc_feature complement(1904774..1905478)
+ /locus_tag="SARI_01978"
+ /note="ATP-binding cassette domain of the bacterial lipid
+ flippase and related proteins, subfamily C; Region:
+ ABCC_MsbA; cd03251"
+ /db_xref="CDD:213218"
+ misc_feature complement(1905353..1905376)
+ /locus_tag="SARI_01978"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213218"
+ misc_feature complement(order(1904891..1904893,1904984..1904989,
+ 1905230..1905232,1905350..1905358,1905362..1905367))
+ /locus_tag="SARI_01978"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213218"
+ misc_feature complement(1905230..1905241)
+ /locus_tag="SARI_01978"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213218"
+ misc_feature complement(1905032..1905061)
+ /locus_tag="SARI_01978"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213218"
+ misc_feature complement(1904984..1905001)
+ /locus_tag="SARI_01978"
+ /note="Walker B; other site"
+ /db_xref="CDD:213218"
+ misc_feature complement(1904966..1904977)
+ /locus_tag="SARI_01978"
+ /note="D-loop; other site"
+ /db_xref="CDD:213218"
+ misc_feature complement(1904885..1904905)
+ /locus_tag="SARI_01978"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213218"
+ gene complement(1906538..1908727)
+ /locus_tag="SARI_01979"
+ CDS complement(1906538..1908727)
+ /locus_tag="SARI_01979"
+ /inference="protein motif:HMMPfam:IPR001279"
+ /inference="protein motif:HMMPfam:IPR004477"
+ /inference="protein motif:HMMTigr:IPR004477"
+ /inference="protein motif:HMMTigr:IPR004797"
+ /note="'COG: COG0658 Predicted membrane metal-binding
+ protein;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571001.1"
+ /db_xref="GI:161503889"
+ /db_xref="InterPro:IPR001279"
+ /db_xref="InterPro:IPR004477"
+ /db_xref="InterPro:IPR004797"
+ /translation="MRILAALFCLVCLLCLIPHHYARYAALSLLFFLWGTLAARQAIW
+ AGNVLPASTQEATVVITATDHMTTHYGRITQLRGKPLFPAVGIVLYGQYLPTEVCAGQ
+ QWAMTLKVRAVHGQLNEGGFDSQRYALAQHQPLTGRFLQAKAINPTCSLRARYLASLR
+ ATLAPYPWQQVILALGMGERGAMSQDIKAVMRETGTAHLMAISGLHIAFAALLAAGLI
+ RGGQLFLPVRWIRWQTPLLGGIVCAMFYAWLTGLQPPALRTVAALSVWGGLKLSGRQW
+ SGWQVWCCCLAAIIFADPVAVISQSLWLSAFAVAGLLFWYQWFPAPNGNFPWSIRWLL
+ NLLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGP
+ FFLEEGVWFLTDRALAALFYLLNALPQGWVNIDQRWQWLTLSPWLTLIAWRLNIWRTW
+ PAVCFSGLLLMSWPLWRPINPSGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPGGD
+ SGQQVIIPWLRWHNLTPEGVILSHEHLDHRGGLRSLQRVWPSMWIRSPLGWQGHLPCF
+ RGEQWQWQGLTFHAHWPLRESAARGNNRSCVVKVDDGVHSILLTGDIEAGAEQKMLSR
+ YWRHLAATFIQVPHHGSNTSSSLPLIQRVHGEAALASASRYNAWRLPSRKVKQRYRQQ
+ EYQWFDTPHQGQISLVFSPQGWRIQGLRDQILPRWYHQWFGVSEDNG"
+ misc_feature complement(1906544..1908679)
+ /locus_tag="SARI_01979"
+ /note="ComEC family competence protein; Provisional;
+ Region: PRK11539"
+ /db_xref="CDD:236924"
+ misc_feature complement(1908332..1908676)
+ /locus_tag="SARI_01979"
+ /note="Domain of unknown function (DUF4131); Region:
+ DUF4131; pfam13567"
+ /db_xref="CDD:222228"
+ misc_feature complement(<1907549..1908196)
+ /locus_tag="SARI_01979"
+ /note="Competence protein; Region: Competence; pfam03772"
+ /db_xref="CDD:217721"
+ misc_feature complement(1906880..1907293)
+ /locus_tag="SARI_01979"
+ /note="Metallo-beta-lactamase superfamily; Region:
+ Lactamase_B; pfam00753"
+ /db_xref="CDD:216099"
+ gene complement(1909032..1909316)
+ /gene="ihfB"
+ /locus_tag="SARI_01980"
+ CDS complement(1909032..1909316)
+ /gene="ihfB"
+ /locus_tag="SARI_01980"
+ /inference="protein motif:BlastProDom:IPR000119"
+ /inference="protein motif:Gene3D:IPR000119"
+ /inference="protein motif:HMMPfam:IPR000119"
+ /inference="protein motif:HMMSmart:IPR000119"
+ /inference="protein motif:HMMTigr:IPR005685"
+ /inference="protein motif:ScanRegExp:IPR000119"
+ /inference="protein motif:superfamily:IPR010992"
+ /inference="similar to AA sequence:SwissProt:P64394"
+ /note="'This protein is one of the two subunits of
+ integration host factor, a specific DNA-binding protein
+ that functions in genetic recombination as well as in
+ transcriptional and translational control'"
+ /codon_start=1
+ /transl_table=11
+ /product="integration host factor subunit beta"
+ /protein_id="YP_001571002.1"
+ /db_xref="GI:161503890"
+ /db_xref="InterPro:IPR000119"
+ /db_xref="InterPro:IPR005685"
+ /db_xref="InterPro:IPR010992"
+ /translation="MTKSELIERLASQQSHIPAKAVEDAVKEMLEHMASTLAQGERIE
+ IRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG"
+ misc_feature complement(1909050..1909313)
+ /gene="ihfB"
+ /locus_tag="SARI_01980"
+ /note="Integration host factor (IHF) and HU are small
+ heterodimeric members of the DNABII protein family that
+ bind and bend DNA, functioning as architectural factors in
+ many cellular processes including transcription,
+ site-specific recombination, and...; Region: HU_IHF;
+ cd00591"
+ /db_xref="CDD:238332"
+ misc_feature complement(order(1909050..1909052,1909071..1909073,
+ 1909077..1909079,1909089..1909094,1909158..1909160,
+ 1909173..1909178,1909185..1909199,1909209..1909214,
+ 1909221..1909226,1909233..1909235,1909275..1909277,
+ 1909290..1909292,1909299..1909301,1909308..1909313))
+ /gene="ihfB"
+ /locus_tag="SARI_01980"
+ /note="IHF dimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238332"
+ misc_feature complement(order(1909065..1909067,1909074..1909076,
+ 1909080..1909082,1909092..1909094,1909122..1909133,
+ 1909140..1909142,1909146..1909151,1909155..1909157,
+ 1909167..1909169,1909176..1909181,1909185..1909187,
+ 1909191..1909193,1909236..1909238,1909305..1909313))
+ /gene="ihfB"
+ /locus_tag="SARI_01980"
+ /note="IHF - DNA interface [nucleotide binding]; other
+ site"
+ /db_xref="CDD:238332"
+ unsure 1909409..1909490
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(1909472..1911145)
+ /gene="rpsA"
+ /locus_tag="SARI_01981"
+ CDS complement(1909472..1911145)
+ /gene="rpsA"
+ /locus_tag="SARI_01981"
+ /inference="protein motif:Gene3D:IPR012340"
+ /inference="protein motif:HMMPfam:IPR003029"
+ /inference="protein motif:HMMSmart:IPR003029"
+ /inference="protein motif:HMMTigr:IPR000110"
+ /inference="protein motif:superfamily:IPR008994"
+ /inference="similar to AA sequence:REFSEQ:YP_215922.1"
+ /note="in Escherichia coli this protein is involved in
+ binding to the leader sequence of mRNAs and is itself
+ bound to the 30S subunit; autoregulates expression via a
+ C-terminal domain; in most gram negative organisms this
+ protein is composed of 6 repeats of the S1 domain while in
+ gram positive there are 4 repeats; the S1 nucleic
+ acid-binding domain is found associated with other
+ proteins"
+ /codon_start=1
+ /transl_table=11
+ /product="30S ribosomal protein S1"
+ /protein_id="YP_001571003.1"
+ /db_xref="GI:161503891"
+ /db_xref="InterPro:IPR000110"
+ /db_xref="InterPro:IPR003029"
+ /db_xref="InterPro:IPR008994"
+ /db_xref="InterPro:IPR012340"
+ /translation="MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDIVLVDAGLKS
+ ESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAY
+ EDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLD
+ QKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLL
+ HITDMAWKRVKHPSEIVNVGDEINVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE
+ GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD
+ IDEERRRISLGLKQCKSNPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH
+ LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK
+ GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDDVEAKFTGV
+ DRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE"
+ misc_feature complement(1909475..1911145)
+ /gene="rpsA"
+ /locus_tag="SARI_01981"
+ /note="30S ribosomal protein S1; Reviewed; Region: rpsA;
+ PRK06299"
+ /db_xref="CDD:235775"
+ misc_feature complement(1910885..1911085)
+ /gene="rpsA"
+ /locus_tag="SARI_01981"
+ /note="S1_RPS1_repeat_ec1_hs1: Ribosomal protein S1 (RPS1)
+ domain. RPS1 is a component of the small ribosomal subunit
+ thought to be involved in the recognition and binding of
+ mRNA's during translation initiation. The bacterial
+ RPS1 domain architecture...; Region:
+ S1_RPS1_repeat_ec1_hs1; cd05687"
+ /db_xref="CDD:240192"
+ misc_feature complement(order(1910999..1911001,1911005..1911007,
+ 1911035..1911037,1911059..1911061))
+ /gene="rpsA"
+ /locus_tag="SARI_01981"
+ /note="RNA binding site [nucleotide binding]; other site"
+ /db_xref="CDD:240192"
+ misc_feature complement(1910633..1910830)
+ /gene="rpsA"
+ /locus_tag="SARI_01981"
+ /note="S1_RPS1_repeat_ec2_hs2: Ribosomal protein S1 (RPS1)
+ domain. RPS1 is a component of the small ribosomal subunit
+ thought to be involved in the recognition and binding of
+ mRNA's during translation initiation. The bacterial
+ RPS1 domain architecture...; Region:
+ S1_RPS1_repeat_ec2_hs2; cd04465"
+ /db_xref="CDD:239911"
+ misc_feature complement(order(1910750..1910752,1910756..1910758,
+ 1910783..1910785,1910807..1910809))
+ /gene="rpsA"
+ /locus_tag="SARI_01981"
+ /note="RNA binding site [nucleotide binding]; other site"
+ /db_xref="CDD:239911"
+ misc_feature complement(1910372..1910575)
+ /gene="rpsA"
+ /locus_tag="SARI_01981"
+ /note="S1_RPS1_repeat_ec3: Ribosomal protein S1 (RPS1)
+ domain. RPS1 is a component of the small ribosomal subunit
+ thought to be involved in the recognition and binding of
+ mRNA's during translation initiation. The bacterial
+ RPS1 domain architecture consists...; Region:
+ S1_RPS1_repeat_ec3; cd05688"
+ /db_xref="CDD:240193"
+ misc_feature complement(order(1910489..1910491,1910495..1910497,
+ 1910522..1910524,1910546..1910548))
+ /gene="rpsA"
+ /locus_tag="SARI_01981"
+ /note="RNA binding site [nucleotide binding]; other site"
+ /db_xref="CDD:240193"
+ misc_feature complement(1910111..1910326)
+ /gene="rpsA"
+ /locus_tag="SARI_01981"
+ /note="S1_RPS1_repeat_ec4: Ribosomal protein S1 (RPS1)
+ domain. RPS1 is a component of the small ribosomal subunit
+ thought to be involved in the recognition and binding of
+ mRNA's during translation initiation. The bacterial
+ RPS1 domain architecture consists...; Region:
+ S1_RPS1_repeat_ec4; cd05689"
+ /db_xref="CDD:240194"
+ misc_feature complement(order(1910231..1910233,1910237..1910239,
+ 1910267..1910269,1910291..1910293))
+ /gene="rpsA"
+ /locus_tag="SARI_01981"
+ /note="RNA binding site [nucleotide binding]; other site"
+ /db_xref="CDD:240194"
+ misc_feature complement(1909850..1910056)
+ /gene="rpsA"
+ /locus_tag="SARI_01981"
+ /note="S1_like: Ribosomal protein S1-like RNA-binding
+ domain. Found in a wide variety of RNA-associated
+ proteins. Originally identified in S1 ribosomal protein.
+ This superfamily also contains the Cold Shock Domain
+ (CSD), which is a homolog of the S1 domain; Region:
+ S1_like; cl09927"
+ /db_xref="CDD:245202"
+ misc_feature complement(order(1909970..1909972,1909976..1909978,
+ 1910006..1910008,1910030..1910032))
+ /gene="rpsA"
+ /locus_tag="SARI_01981"
+ /note="RNA binding site [nucleotide binding]; other site"
+ /db_xref="CDD:238094"
+ misc_feature complement(1909586..1909795)
+ /gene="rpsA"
+ /locus_tag="SARI_01981"
+ /note="S1_RPS1_repeat_ec6: Ribosomal protein S1 (RPS1)
+ domain. RPS1 is a component of the small ribosomal subunit
+ thought to be involved in the recognition and binding of
+ mRNA's during translation initiation. The bacterial
+ RPS1 domain architecture consists...; Region:
+ S1_RPS1_repeat_ec6; cd05691"
+ /db_xref="CDD:240196"
+ misc_feature complement(order(1909709..1909711,1909715..1909717,
+ 1909745..1909747,1909769..1909771))
+ /gene="rpsA"
+ /locus_tag="SARI_01981"
+ /note="RNA binding site [nucleotide binding]; other site"
+ /db_xref="CDD:240196"
+ unsure 1911092..1911313
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(1911259..1911942)
+ /gene="cmk"
+ /locus_tag="SARI_01983"
+ CDS complement(1911259..1911942)
+ /gene="cmk"
+ /locus_tag="SARI_01983"
+ /inference="protein motif:BlastProDom:IPR011769"
+ /inference="protein motif:HMMPfam:IPR011994"
+ /inference="protein motif:HMMTigr:IPR003136"
+ /inference="similar to AA sequence:INSD:CAD05380.1"
+ /note="Catalyzes the formation of (d)CDP from ATP and
+ (d)CMP"
+ /codon_start=1
+ /transl_table=11
+ /product="cytidylate kinase"
+ /protein_id="YP_001571004.1"
+ /db_xref="GI:161503893"
+ /db_xref="InterPro:IPR003136"
+ /db_xref="InterPro:IPR011769"
+ /db_xref="InterPro:IPR011994"
+ /translation="MTAIAPVITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLA
+ LAALHHHVGLASEDALVPLASHLDVRFVSTDGNLEVILEGEDVSGEIRTQEVANAASQ
+ VAAFPRVREALLRRQRAFREAPGLIADGRDMGTVVFPDAPVKIFLDASSEERANRRML
+ QLQEKGFSVNFERLLAEIKERDDRDRNRAVAPLVPAADALVLDSTRLSIEQVIEKALQ
+ YARQKLALA"
+ misc_feature complement(1911268..1911939)
+ /gene="cmk"
+ /locus_tag="SARI_01983"
+ /note="cytidylate kinase; Provisional; Region: cmk;
+ PRK00023"
+ /db_xref="CDD:234579"
+ misc_feature complement(1911379..1911924)
+ /gene="cmk"
+ /locus_tag="SARI_01983"
+ /note="Cytidine monophosphate kinase (CMPK) catalyzes the
+ reversible phosphorylation of cytidine monophosphate (CMP)
+ to produce cytidine diphosphate (CDP), using ATP as the
+ preferred phosphoryl donor; Region: CMPK; cd02020"
+ /db_xref="CDD:238978"
+ misc_feature complement(order(1911379..1911381,1911547..1911552,
+ 1911613..1911615))
+ /gene="cmk"
+ /locus_tag="SARI_01983"
+ /note="CMP-binding site; other site"
+ /db_xref="CDD:238978"
+ misc_feature complement(order(1911388..1911390,1911400..1911402))
+ /gene="cmk"
+ /locus_tag="SARI_01983"
+ /note="The sites determining sugar specificity; other
+ site"
+ /db_xref="CDD:238978"
+ gene 1911875..1912168
+ /locus_tag="SARI_01982"
+ CDS 1911875..1912168
+ /locus_tag="SARI_01982"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571005.1"
+ /db_xref="GI:161503892"
+ /translation="MHKVPLPAPLGPSMVITGAIAVIFISLNRRTVNANAAHYTRQRS
+ RPLTLRAKTSFVCNQMRNNCAIIAGWRGTSPKDDNDLLFISGNSVAHMLRAVG"
+ gene complement(1911969..1912070)
+ /locus_tag="SARI_01984"
+ CDS complement(1911969..1912070)
+ /locus_tag="SARI_01984"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571006.1"
+ /db_xref="GI:161503894"
+ /translation="MRNYSASDYRQNWFLHATLTVASVGAYNARRLR"
+ gene complement(1912497..1913780)
+ /locus_tag="SARI_01985"
+ CDS complement(1912497..1913780)
+ /locus_tag="SARI_01985"
+ /inference="protein motif:BlastProDom:IPR001986"
+ /inference="protein motif:Gene3D:IPR001986"
+ /inference="protein motif:HMMPfam:IPR001986"
+ /inference="protein motif:HMMTigr:IPR006264"
+ /inference="protein motif:ScanRegExp:IPR001986"
+ /inference="protein motif:superfamily:IPR013792"
+ /inference="similar to AA sequence:INSD:AAX64838.1"
+ /note="catalyzes the formation of
+ 5-O-(1-carboxyvinyl)-3-phosphoshikimate from
+ phosphoenolpyruvate and 3-phosphoshikimate in tryptophan
+ biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="3-phosphoshikimate 1-carboxyvinyltransferase"
+ /protein_id="YP_001571007.1"
+ /db_xref="GI:161503895"
+ /db_xref="InterPro:IPR001986"
+ /db_xref="InterPro:IPR006264"
+ /db_xref="InterPro:IPR013792"
+ /translation="MESLTLQPIARVDGAINLPGSKSVSNRALLLAALACGKTVLTNL
+ LDSDDVRHMLNALSALGIDYTLSADRTRCDIIGNGGALRAPGDLELFLGNAGTAMRPL
+ AAALCLGQNETVLTGEPRMKERPIGHLVDSLRQGGANIDYLEQENYPPLRLRGGFTGG
+ DIEVDGSVSSQFLTALLMTAPLAPKDTIIRVKGELVSKPYIDITLNLMKTFGVEIMNH
+ HYQQFVVKGGQQYHSPGRYLVEGDASSASYFLAAGAIKGGTVKVTGIGRKSMQGDIRF
+ ADVLEKMGATITWGDDFIACTRGELHAIDMDMNHIPDAAMTIATTALFAKGTTTLRNI
+ YNWRVKETDRLFAMATELRKVGAEVEEGDDYIRITPPAKLHHADIGTYNDHRMAMCFS
+ LVALSDTPVTILDPKCTAKTFPDYFEQLARISTPA"
+ misc_feature complement(1912509..1913780)
+ /locus_tag="SARI_01985"
+ /note="3-phosphoshikimate 1-carboxyvinyltransferase;
+ Provisional; Region: PRK02427"
+ /db_xref="CDD:235037"
+ misc_feature complement(1912512..1913747)
+ /locus_tag="SARI_01985"
+ /note="This domain family includes the Enolpyruvate
+ transferase (EPT) family and the RNA 3' phosphate
+ cyclase family (RTPC). These 2 families differ in that EPT
+ is formed by 3 repeats of an alpha-beta structural domain
+ while RTPC has 3 similar repeats...; Region:
+ EPT_RTPC-like; cl00288"
+ /db_xref="CDD:241755"
+ misc_feature complement(order(1912545..1912547,1912623..1912625,
+ 1912833..1912835,1913040..1913042))
+ /locus_tag="SARI_01985"
+ /note="putative active site [active]"
+ /db_xref="CDD:238794"
+ gene complement(1913851..1914939)
+ /locus_tag="SARI_01986"
+ CDS complement(1913851..1914939)
+ /locus_tag="SARI_01986"
+ /inference="protein motif:BlastProDom:IPR003248"
+ /inference="protein motif:HMMPfam:IPR000192"
+ /inference="protein motif:HMMTigr:IPR003248"
+ /inference="protein motif:ScanRegExp:IPR000192"
+ /inference="similar to AA sequence:INSD:CAA37461.1"
+ /note="catalyzes the formation of 3-phosphonooxypyruvate
+ and glutamate from O-phospho-L-serine and 2-oxoglutarate;
+ required both in major phosphorylated pathway of serine
+ biosynthesis and in the biosynthesis of pyridoxine"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphoserine aminotransferase"
+ /protein_id="YP_001571008.1"
+ /db_xref="GI:161503896"
+ /db_xref="InterPro:IPR000192"
+ /db_xref="InterPro:IPR003248"
+ /translation="MAQVFNFSSGPAMLPTEVLKLAQQELRDWHDLGTSVMEISHRGK
+ EFIQVAEEAEQDFRDLLSIPSNYKVLFCHGGGRGQFAGVPLNLLGDRTTADYVDAGYW
+ AASAIKEAKKYCAPQIIDAKITVDGKRAVKPMREWQLSDNAAYLHYCPNETIDGIAID
+ ETPDFGPGVVVTADFSSTILSAPLDVSRYGVIYAGAQKNIGPAGLTLVIVREDLLGKA
+ HENCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAQLL
+ YGVIDNSDFYRNDVAQANRSRMNVPFQLADNALDKVFLEESFAAGLHALKGHRVVGGM
+ RASIYNAMPIEGVKALTDFMIDFERRHG"
+ misc_feature complement(1913863..1914927)
+ /locus_tag="SARI_01986"
+ /note="Phosphoserine aminotransferase (PSAT) family. This
+ family belongs to pyridoxal phosphate (PLP)-dependent
+ aspartate aminotransferase superfamily (fold I). The major
+ group in this CD corresponds to phosphoserine
+ aminotransferase (PSAT). PSAT is active as...; Region:
+ PSAT_like; cd00611"
+ /db_xref="CDD:99736"
+ misc_feature complement(order(1914217..1914225,1914331..1914333,
+ 1914601..1914606,1914613..1914615,1914709..1914711,
+ 1914718..1914723,1914898..1914900,1914904..1914909,
+ 1914922..1914924))
+ /locus_tag="SARI_01986"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99736"
+ misc_feature complement(order(1913956..1913958,1914346..1914351,
+ 1914418..1914420,1914481..1914483,1914634..1914636,
+ 1914709..1914714,1914913..1914915))
+ /locus_tag="SARI_01986"
+ /note="substrate-cofactor binding pocket; other site"
+ /db_xref="CDD:99736"
+ misc_feature complement(order(1914346..1914351,1914412..1914414,
+ 1914418..1914420,1914481..1914483,1914634..1914636,
+ 1914709..1914717))
+ /locus_tag="SARI_01986"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:99736"
+ misc_feature complement(1914346..1914348)
+ /locus_tag="SARI_01986"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:99736"
+ gene complement(1915125..1915817)
+ /locus_tag="SARI_01987"
+ CDS complement(1915125..1915817)
+ /locus_tag="SARI_01987"
+ /inference="protein motif:HMMPfam:IPR007353"
+ /inference="similar to AA sequence:INSD:AAL19910.1"
+ /note="'COG: COG2323 Predicted membrane protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571009.1"
+ /db_xref="GI:161503897"
+ /db_xref="InterPro:IPR007353"
+ /translation="MKAFDLQRMALDNVPVAFLGEVALRSFYTFVLVFLFLKVTGRRG
+ VRQMSLFEVLIILTLGSAAGDVAFYDDVPMLPVLVVFITLALLYRLVMWLMAHSEKLE
+ DLLEGKSVVIVEDGELAWEKLQRSNMTEFEFFMELRLNGVEQLGQVRLAILETNGQIS
+ VYFFEDKDVKPGLSILPEHCTPRFTEIPEAGDYACVRCSEVVRMTVGEKQLCPRCANP
+ EWTKASWAKRVV"
+ misc_feature complement(1915134..1915769)
+ /locus_tag="SARI_01987"
+ /note="Predicted membrane protein [Function unknown];
+ Region: COG2323"
+ /db_xref="CDD:225205"
+ gene 1915954..1917714
+ /locus_tag="SARI_01988"
+ CDS 1915954..1917714
+ /locus_tag="SARI_01988"
+ /inference="protein motif:HMMPfam:IPR003776"
+ /inference="protein motif:HMMTigr:IPR003776"
+ /note="'COG: COG1944 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571010.1"
+ /db_xref="GI:161503898"
+ /db_xref="InterPro:IPR003776"
+ /translation="MTQTFIPGKDAALEDSIARFQQKLLDLGFHIEEAAWLNPVPNVW
+ SVHIRDKECALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETVANGPFVH
+ YPNEKWFPLTENDDVPEGLLDARLRAFYDPENELTGSQLIDLQSGNEARGVCGLPFTR
+ QSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPE
+ IPAEVMARYPAVMESIATLEAEGFPIFAYDGSLGGKYPVICVVLFNPANGTCFASFGA
+ HPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDL
+ FKQDADYPFTDWSFSGTTEEEFATLMAIFAAEDKEVYIADYEHLGVYACRIIVPGMSD
+ IYPTEDLWLANNNMGSHLRETLLSLPGSAWNKEDYLNLIEQLDEEGFDDFTRVRELLG
+ LATGADNGWYTLRVGELKAMLALAGGDLEQALIWTEWTMEFNSSVFSPARANYYRCLQ
+ TLLLLSQEDARQPLQYLNAFIKMYGAEAVEAASAALSGEAAFYGLPAVDHDLQAFPAH
+ QSLLKAYDKLQRAKAAYWSK"
+ misc_feature 1915984..1917165
+ /locus_tag="SARI_01988"
+ /note="uncharacterized domain; Region: TIGR00702"
+ /db_xref="CDD:129785"
+ misc_feature 1916125..1917126
+ /locus_tag="SARI_01988"
+ /note="YcaO-like family; Region: YcaO; pfam02624"
+ /db_xref="CDD:217151"
+ gene 1918119..1918976
+ /locus_tag="SARI_01989"
+ CDS 1918119..1918976
+ /locus_tag="SARI_01989"
+ /inference="protein motif:HMMPfam:IPR000292"
+ /inference="protein motif:HMMTigr:IPR000292"
+ /inference="protein motif:ScanRegExp:IPR000292"
+ /inference="similar to AA sequence:REFSEQ:YP_215915.1"
+ /note="'KEGG: shn:Shewana3_1556 1.9e-75 meTHIonine
+ gamma-lyase K01761;
+ COG: COG2116 Formate/nitrite family of transporters;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="formate transporter"
+ /protein_id="YP_001571011.1"
+ /db_xref="GI:161503899"
+ /db_xref="InterPro:IPR000292"
+ /translation="MKADNPFDLLLPAAMAKVAEEAGVYKATKHPLKTFWLAITAGVF
+ ISIAFVFYITATTGTGAMPYGIAKLIGGICFSLGLILCVICGADLFTSTVLIVVAKAS
+ GRITWGQLAKNWLNVYFGNLIGALLFVLLMWLSGEYMTANGQWGFNVLQTADHKMHHT
+ FIEAVCLGILANLMVCLAVWMSYSGRSLMDKAFIMVLPVAMFVASGFEHSIANMFMIP
+ MGIVIRDFATPEFWTAVGSSPESFSHLTVTSFITDNLIPVTIGNIIGGGLLVGLTYWV
+ IYLRGNDHH"
+ misc_feature 1918119..1918973
+ /locus_tag="SARI_01989"
+ /note="formate transporter; Provisional; Region: PRK10805"
+ /db_xref="CDD:182746"
+ gene 1919037..1921319
+ /locus_tag="SARI_01990"
+ CDS 1919037..1921319
+ /locus_tag="SARI_01990"
+ /inference="protein motif:HMMPfam:IPR001150"
+ /inference="protein motif:HMMPfam:IPR004184"
+ /inference="protein motif:HMMTigr:IPR005949"
+ /inference="protein motif:ScanRegExp:IPR001150"
+ /note="'KEGG: stm:STM0973 0. pflB; pyruvate formate lyase
+ I K00656;
+ COG: COG1882 Pyruvate-formate lyase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571012.1"
+ /db_xref="GI:161503900"
+ /db_xref="InterPro:IPR001150"
+ /db_xref="InterPro:IPR004184"
+ /db_xref="InterPro:IPR005949"
+ /translation="MSELNEKLATAWEGFTKGDWQNEVNVRDFIQKNYTPYEGDESFL
+ AGATEATTTLWDSVMEGVKQENRTHAPVDFDTSVASTITSHDAGYINKELEKIVGLQT
+ EAPLKRAIIPFGGIKMVEGSCKAYNRELDPMLKKIFTEYRKTHNQGVFDVYTPDILRC
+ RKSGVLTGLPDAYGRGRIIGDYRRVALYGIDYLMKDKFAQFTSLQSDLENGVNLEATI
+ RLREEIAEQHRALGQIKEMAAKYGCDISGPATNAQEAIQWTYFGYLAAVKSQNGAAMS
+ FGRVSTFLDVYIERDLKAGKITEQDAQEMIDHLVMKLRMVRFLRTPEYDELFSGDPIW
+ ATESIGGMGVDGRTLVTKNSFRFLNTLYTMGPSPEPNITVLWSEKLPLNFKKFAAKVS
+ IDTSSLQYENDDLMRPDFNNDDYAIACCVSPMIVGKQMQFFGARANLAKTMLYAINGG
+ VDEKLKMQVGPKSEPIKGDVLNFDEVMDRMDHFMDWLAKQYVTALNVIHYMHDKYSYE
+ ASLMALHDRDVIRTMACGIAGLSVAADSLSAIKYAKVKPIRDEDGLAIDFEIEGEYPQ
+ FGNNDARVDDMAVDLVERFMKKIQKLTTYRGAIPTQSVLTITSNVVYGKKTGNTPDGR
+ RAGAPFGPGANPMHGRDQKGAVASLTSVAKLPFAYAKDGISYTFSIVPNALGKDDEVR
+ KTNLAGLMDGYFHHEASIEGGQHLNVNVMNREMLLDAMEHPEKYPQLTIRVSGYAVRF
+ NSLTKEQQQDVITRTFTQTM"
+ misc_feature 1919067..1921316
+ /locus_tag="SARI_01990"
+ /note="formate acetyltransferase 1; Region: pyr_form_ly_1;
+ TIGR01255"
+ /db_xref="CDD:233331"
+ misc_feature 1919067..1921304
+ /locus_tag="SARI_01990"
+ /note="Pyruvate formate lyase 1; Region: PFL1; cd01678"
+ /db_xref="CDD:153087"
+ misc_feature order(1919385..1919390,1919472..1919477,1919484..1919489,
+ 1919493..1919495,1919508..1919510,1919517..1919522)
+ /locus_tag="SARI_01990"
+ /note="coenzyme A binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:153087"
+ misc_feature order(1919565..1919567,1919853..1919858,1920018..1920020,
+ 1920036..1920038,1920291..1920293,1920333..1920335,
+ 1920342..1920344,1920849..1920851,1920855..1920857)
+ /locus_tag="SARI_01990"
+ /note="active site"
+ /db_xref="CDD:153087"
+ misc_feature order(1920291..1920296,1921239..1921241)
+ /locus_tag="SARI_01990"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:153087"
+ misc_feature 1921230..1921244
+ /locus_tag="SARI_01990"
+ /note="glycine loop; other site"
+ /db_xref="CDD:153087"
+ gene complement(1921396..1922250)
+ /locus_tag="SARI_01991"
+ CDS complement(1921396..1922250)
+ /locus_tag="SARI_01991"
+ /inference="similar to AA sequence:REFSEQ:YP_215913.1"
+ /note="'COG: NOG25864 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571013.1"
+ /db_xref="GI:161503901"
+ /translation="MGPWDRLKEYFRTHKKEEALKVLYELIHGCEREKQAELGVDVSG
+ MDKIYAFERLKQYANPAQQDRFVMRFNMNQTHVLFMIDGQVIDKLNLKRLLNVWDECI
+ LKPMEWDEEELFFKICICYGKRIFSDAELLQNLASNLRRSVNEDDSIKDAVYELMRSG
+ EDRHMACVEWNGNLTREEIEKLKCLNMGSFDASTQFFKIGYWDLEGEVLFDMLHPTIL
+ FMLQGYTPSVQLTEANTRLLTEILKADDDDYHNNKREIDLILERLYKSHNGSLFISKD
+ SCCRNMLV"
+ misc_feature complement(1921399..1922250)
+ /locus_tag="SARI_01991"
+ /note="pathogenicity island 1 protein SopD2; Provisional;
+ Region: PRK15380"
+ /db_xref="CDD:185278"
+ gene 1922919..1923716
+ /locus_tag="SARI_01993"
+ CDS 1922919..1923716
+ /locus_tag="SARI_01993"
+ /inference="protein motif:HMMPfam:IPR007197"
+ /inference="protein motif:HMMTigr:IPR012838"
+ /inference="similar to AA sequence:REFSEQ:NP_455458.1"
+ /note="'KEGG: sec:SC0924 9.8e-102 pflA; pyruvate formate
+ lyase activating enzyme 1 K04069;
+ COG: COG1180 Pyruvate-formate lyase-activating enzyme;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="pyruvate formate lyase-activating enzyme"
+ /protein_id="YP_001571015.2"
+ /db_xref="GI:448236249"
+ /db_xref="InterPro:IPR007197"
+ /db_xref="InterPro:IPR012838"
+ /translation="MSNLTDCIKKENIAVTADKNPLIGRIHSFESCGTVDGPGIRFIT
+ FFQGCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEVVTYRHFMNASGGGVTASGGEAIL
+ QAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVTDLVMLDLKQMNDEIHQN
+ LVGVSNHRTLEFAQYLSTKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIEL
+ LPYHELGKHKWVAMGEEYKLDGVKPPKKETMERVKGILEQYGHKVMY"
+ misc_feature 1922985..1923713
+ /locus_tag="SARI_01993"
+ /note="pyruvate formate lyase-activating enzyme 1;
+ Provisional; Region: pflA; PRK11145"
+ /db_xref="CDD:182994"
+ misc_feature 1923045..1923599
+ /locus_tag="SARI_01993"
+ /note="Radical SAM superfamily. Enzymes of this family
+ generate radicals by combining a 4Fe-4S cluster and
+ S-adenosylmethionine (SAM) in close proximity. They are
+ characterized by a conserved CxxxCxxC motif, which
+ coordinates the conserved iron-sulfur cluster; Region:
+ Radical_SAM; cd01335"
+ /db_xref="CDD:100105"
+ misc_feature order(1923063..1923065,1923069..1923071,1923075..1923077,
+ 1923081..1923089,1923204..1923206,1923210..1923215,
+ 1923288..1923296,1923357..1923359,1923480..1923482,
+ 1923576..1923581)
+ /locus_tag="SARI_01993"
+ /note="FeS/SAM binding site; other site"
+ /db_xref="CDD:100105"
+ gene complement(1922928..1923113)
+ /locus_tag="SARI_01992"
+ CDS complement(1922928..1923113)
+ /locus_tag="SARI_01992"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571014.1"
+ /db_xref="GI:161503902"
+ /translation="MRIPCVAIMAIQAAHQAALEKGNKADAWAINSATGFKRVNAANK
+ RIFISGYCNIFFFNTIS"
+ gene complement(1924443..1925864)
+ /locus_tag="SARI_01994"
+ CDS complement(1924443..1925864)
+ /locus_tag="SARI_01994"
+ /inference="protein motif:HMMPanther:IPR002293"
+ /inference="protein motif:HMMPfam:IPR004841"
+ /inference="similar to AA sequence:INSD:CAD05369.1"
+ /note="'KEGG: eci:UTI89_C0120 3.7e-10 aroP; aromatic amino
+ acid transport protein AroP K03293;
+ COG: COG0531 Amino acid transporters;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571016.1"
+ /db_xref="GI:161503904"
+ /db_xref="InterPro:IPR002293"
+ /db_xref="InterPro:IPR004841"
+ /translation="MSNVQEKQLRWYNIALMSFITVWGFGNVVNNYANQGLVVVFSWV
+ FIFALYFIPYALIVGQLGSTFKEGKGGVSTWIKHTMGPGLAYLAAWTYWVVHIPYLAQ
+ KPQAILIALGWALKGDGSLIKEYTVVALQGLTLALFVFFMWVASRGMKSLKVVGSVAG
+ IAMFIMSILYVVMAVTAPAITSVEIATANITWQSFIPHIDFTYITTISMLVFAVGGAE
+ KISPYVNQTRNPGKEFPKGMLFLAVMVAVCAILGSLAMGMMFDSRHIPDDLMTNGQYY
+ AFQKLGEYYHLGNTLMVIYAIANTLGQIAALVFSIDAPLKVLLGDADSKYIPQRLCRT
+ NASGTPVNGYLLTLVLVAILIMLPTLGIGDMNNLYKWLLNLNSVVMPLRYLWVFVAFI
+ AVIRLAQKYKPEYVFIRNRALALTVGIWCFAFTAFACLTGIFPKMEAFTPEWVFQLTL
+ NIGTPFVLVGLGLIFPLLARRNA"
+ misc_feature complement(1924581..1925864)
+ /locus_tag="SARI_01994"
+ /note="inner membrane transporter YjeM; Provisional;
+ Region: PRK15238"
+ /db_xref="CDD:237929"
+ gene complement(1926082..1927230)
+ /locus_tag="SARI_01995"
+ CDS complement(1926082..1927230)
+ /locus_tag="SARI_01995"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="similar to AA sequence:INSD:AAL19902.1"
+ /note="'KEGG: eci:UTI89_C5041 6.2e-09 yjiJ; hypothetical
+ protein YjiJ K00403;
+ COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: endoplasmic reticulum, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative MFS family transporter protein"
+ /protein_id="YP_001571017.1"
+ /db_xref="GI:161503905"
+ /db_xref="InterPro:IPR011701"
+ /translation="MSTYTRPVKLLLCGLLLLTLAIAVLNTLVPLWLAQASLPTWQVG
+ MVSSSYFTGNLVGTLFTGYLIKRIGFNRSYYLASLIFAAGCVGLGVMVGFWSWMSWRF
+ IAGIGCAMIWVVVESALMCSGTSHNRGRLLAAYMMVYYVGTFLGQLLVSKVSGELLHV
+ LPWVTGMILAGILPLLFTRIVNQQTEARYSTSISAMLKLRQARLGVNGCIISGIVLGS
+ LYGLMPLYLKHQGMANASIGFWMAVLVSAGILGQWPVGRLADKFGRLLVLRVQVFVVI
+ LGSIVMLTQAAMAPALFILGAAGFTLYPVAMAWACEKVEHHQLVAMNQALLLSYTVGS
+ LLGPSFTAMLMQNYSDNLLFLMIASVSFIYLLMLLRNAGQTPNPVAHI"
+ misc_feature complement(1926088..1927230)
+ /locus_tag="SARI_01995"
+ /note="putative MFS family transporter protein;
+ Provisional; Region: PRK03633"
+ /db_xref="CDD:179614"
+ misc_feature complement(1926121..1927143)
+ /locus_tag="SARI_01995"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature complement(order(1926229..1926231,1926238..1926243,
+ 1926250..1926255,1926262..1926267,1926298..1926300,
+ 1926307..1926312,1926322..1926324,1926331..1926336,
+ 1926343..1926345,1926475..1926477,1926487..1926489,
+ 1926496..1926498,1926508..1926510,1926520..1926522,
+ 1926559..1926561,1926568..1926573,1926580..1926585,
+ 1926592..1926594,1926802..1926804,1926820..1926825,
+ 1926832..1926837,1926871..1926873,1926880..1926885,
+ 1926892..1926897,1926904..1926909,1927045..1927050,
+ 1927054..1927059,1927069..1927071,1927078..1927083,
+ 1927090..1927092,1927141..1927143))
+ /locus_tag="SARI_01995"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene 1927475..1927711
+ /locus_tag="SARI_01996"
+ CDS 1927475..1927711
+ /locus_tag="SARI_01996"
+ /inference="protein motif:Gene3D:IPR000868"
+ /inference="protein motif:HMMPfam:IPR000868"
+ /inference="protein motif:superfamily:IPR000868"
+ /inference="similar to AA sequence:INSD:ABJ00280.1"
+ /note="'KEGG: reh:H16_A0619 2.5e-16 YcaC related
+ amidohydrolase K00517;
+ COG: COG1335 Amidases related to nicotinamidase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571018.1"
+ /db_xref="GI:161503906"
+ /db_xref="InterPro:IPR000868"
+ /translation="MHSGKGYTARLSLPLQTEKVMTRPYVRLDKNDAAVLLVDYQAGL
+ LLLARDIEPDKFKNNMLVLNDLAKSFNQPINTWG"
+ misc_feature 1927556..>1927696
+ /locus_tag="SARI_01996"
+ /note="Cysteine hydrolases; This family contains
+ amidohydrolases, like CSHase (N-carbamoylsarcosine
+ amidohydrolase), involved in creatine metabolism and
+ nicotinamidase, converting nicotinamide to nicotinic acid
+ and ammonia in the pyridine nucleotide cycle. It...;
+ Region: cysteine_hydrolases; cl00220"
+ /db_xref="CDD:241698"
+ gene 1927788..1927889
+ /locus_tag="SARI_01997"
+ CDS 1927788..1927889
+ /locus_tag="SARI_01997"
+ /inference="protein motif:Gene3D:IPR000868"
+ /inference="protein motif:HMMPfam:IPR000868"
+ /inference="protein motif:superfamily:IPR000868"
+ /note="'KEGG: reh:H16_A1689 2.2e-10 ycaC; YcaC related
+ amidohydrolase K00517;
+ COG: COG1335 Amidases related to nicotinamidase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571019.1"
+ /db_xref="GI:161503907"
+ /db_xref="InterPro:IPR000868"
+ /translation="MAFPALSAIEEGFDVFVVTDASGTFNEITRHYA"
+ misc_feature <1927788..1927886
+ /locus_tag="SARI_01997"
+ /note="Cysteine hydrolases; This family contains
+ amidohydrolases, like CSHase (N-carbamoylsarcosine
+ amidohydrolase), involved in creatine metabolism and
+ nicotinamidase, converting nicotinamide to nicotinic acid
+ and ammonia in the pyridine nucleotide cycle. It...;
+ Region: cysteine_hydrolases; cl00220"
+ /db_xref="CDD:241698"
+ gene complement(1928116..1928949)
+ /locus_tag="SARI_01998"
+ CDS complement(1928116..1928949)
+ /locus_tag="SARI_01998"
+ /inference="protein motif:HMMPfam:IPR007059"
+ /inference="similar to AA sequence:INSD:CAD05366.1"
+ /note="'KEGG: ecp:ECP_0910 2.4e-130 anaerobic dimethyl
+ sulfoxide reductase, subunit C K07308;
+ COG: COG3302 DMSO reductase anchor subunit;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571020.1"
+ /db_xref="GI:161503908"
+ /db_xref="InterPro:IPR007059"
+ /translation="MIFTVFGQCVAGGFIVLALALMKGGLRAETQQRVIACMFGLWVL
+ MGIGFIASMLHLGSPMRAFNSLNRVGASALSNEIASGSVFFVVGGIGWLLAVLKKLPP
+ ALRAFWLVITMVLGVVFVWMMVRVYNSIDTVPTWYSIWTPLGFFLTLFIGGPLLGYLL
+ LRMAGVDGWAMRLLPAVSVLALVVSAIMAAMQGAELAAIHSSIQQASALVPDYGSLMA
+ WRMVLLAVALCCWIVPQLKGDQPAVPLLSVAFILMLVGELIGRGVFYGLHMTVGMAVA
+ S"
+ misc_feature complement(1928149..1928949)
+ /locus_tag="SARI_01998"
+ /note="DMSO reductase anchor subunit (DmsC); Region: DmsC;
+ pfam04976"
+ /db_xref="CDD:113736"
+ gene complement(1928981..1929598)
+ /locus_tag="SARI_01999"
+ CDS complement(1928981..1929598)
+ /locus_tag="SARI_01999"
+ /inference="protein motif:HMMPfam:IPR001450"
+ /inference="protein motif:ScanRegExp:IPR001450"
+ /inference="similar to AA sequence:REFSEQ:NP_455453.1"
+ /note="'KEGG: ecp:ECP_0909 3.8e-116 anaerobic dimethyl
+ sulfoxide reductase, subunit B K07307;
+ COG: COG0437 Fe-S-cluster-containing hydrogenase
+ components 1;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571021.1"
+ /db_xref="GI:161503909"
+ /db_xref="InterPro:IPR001450"
+ /translation="MTTQYGFFIDSSRCTGCKTCELACKDYKDLTPDVSFRRIYEYAG
+ GDWQEDNGVWHQNVFAYYLSISCNHCEDPACTKVCPSGAMHKRDDGFVVVNEEVCIGC
+ RYCHMACPYGAPQYNAAKGHMTKCDGCYDRVAEGKKPICVESCPLRALDFGPIDELRK
+ KHGDLAAVAPLPRAHFTKPNIVIKPNANSRPTGDTTGYLANPKEV"
+ misc_feature complement(1929110..1929589)
+ /locus_tag="SARI_01999"
+ /note="DMSO reductase, iron-sulfur subunit; Region:
+ DMSO_dmsB; TIGR02951"
+ /db_xref="CDD:131996"
+ misc_feature complement(1929260..1929325)
+ /locus_tag="SARI_01999"
+ /note="4Fe-4S binding domain; Region: Fer4; pfam00037"
+ /db_xref="CDD:215671"
+ gene complement(1929609..1932053)
+ /locus_tag="SARI_02000"
+ CDS complement(1929609..1932053)
+ /locus_tag="SARI_02000"
+ /inference="protein motif:HMMPfam:IPR006656"
+ /inference="protein motif:HMMPfam:IPR006657"
+ /inference="protein motif:HMMPfam:IPR006963"
+ /inference="protein motif:HMMTigr:IPR006311"
+ /inference="protein motif:HMMTigr:IPR011888"
+ /inference="protein motif:ScanRegExp:IPR006655"
+ /inference="protein motif:superfamily:IPR009010"
+ /note="'KEGG: stm:STM0964 0. dmsA; anaerobic dimethyl
+ sulfoxide reductase, subunit A K07306;
+ COG: COG0243 Anaerobic dehydrogenases, typically
+ selenocysteine-containing;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571022.1"
+ /db_xref="GI:161503910"
+ /db_xref="InterPro:IPR006311"
+ /db_xref="InterPro:IPR006655"
+ /db_xref="InterPro:IPR006656"
+ /db_xref="InterPro:IPR006657"
+ /db_xref="InterPro:IPR006963"
+ /db_xref="InterPro:IPR009010"
+ /db_xref="InterPro:IPR011888"
+ /translation="MKTEIPDVVLAAEVSRRGLVKTTAIGGLAMACSAFTLPFTRIAH
+ AAEAISPAKIGEKVVWSACTVNCGSRCPLRMHVVDGEIKYVETDNTGNDDYDGLHQVR
+ ACLRGRSMRRRVYNPDRLKYPMKRVGARGEGKFERISWDEAYNIIATNMQRLIKEYGN
+ ESIYLNYGTGTLGGTMTRSWPPGKTLVARLMNCCGGYLNHYGDYSSAQIAAGLNYTYG
+ GWADGNSPSDIENSKLVVLFGNNPGETRMSGGGVTYYLEQARQKSNARMIIIDPRYTD
+ TGAGREDEWIPIRPGTDAALVNGLAYVLITENMVDQPFLDKYCVGYDEKTLPASAPKN
+ GHYKAYILGQGKDGIAKTPEWAAQITGIPADRIIKLAREIGSAKPAYICQGWGPQRHA
+ NGEIATRAISMLAILTGNVGINGGNSGAREGSYDLPFERMPTLENPVETSISMFMWTD
+ AIERGPEMTALRDGVRGKDKLDVPIKMIWNYAGNCLINQHSEINRTHEILQDDKKCEM
+ IVVIDCHMTSSAKYADILLPDCTASEQMDFALDASCGNMSYVIFTDQAIKPRFECKTI
+ YEMTSELAKRLGVEQQFTEGRTQEEWMRHLYEQSRKTIPNLPTFEEFRKQGIFKQRDP
+ EGHHVAYKDFREDPQANPLTTPSGKIEIYSQALADIAATWELPEGDVIDPLPIYTPGF
+ ENYNDPLTDKFPLQLTGFHYKARVHSTYGNVDVLKAACRQEMWINPVDAQKRGINNGD
+ KVRIFNDRGEVHIEAKVTPRMMPGVVALGEGAWYDPDAKRVDQGGCINVLTTQRPSPL
+ AKGNPSHTNLVQVEKA"
+ misc_feature complement(1929615..1932053)
+ /locus_tag="SARI_02000"
+ /note="anaerobic dimethyl sulfoxide reductase subunit A;
+ Provisional; Region: PRK14990"
+ /db_xref="CDD:184952"
+ misc_feature complement(1929999..1931876)
+ /locus_tag="SARI_02000"
+ /note="This CD (MopB_DmsA-EC) includes the DmsA enzyme of
+ the dmsABC operon encoding the anaerobic dimethylsulfoxide
+ reductase (DMSOR) of Escherichia coli and other related
+ DMSOR-like enzymes. Unlike other DMSOR-like enzymes, this
+ group has a predicted...; Region: MopB_DmsA-EC; cd02770"
+ /db_xref="CDD:239171"
+ misc_feature complement(order(1931742..1931744,1931841..1931843,
+ 1931853..1931855,1931865..1931867))
+ /locus_tag="SARI_02000"
+ /note="putative [Fe4-S4] binding site [ion binding]; other
+ site"
+ /db_xref="CDD:239171"
+ misc_feature complement(order(1930356..1930358,1930449..1930451,
+ 1930503..1930505,1930515..1930520,1930584..1930586,
+ 1930590..1930592,1930602..1930604,1930608..1930610,
+ 1930884..1930886,1930893..1930898,1931175..1931177,
+ 1931181..1931186,1931238..1931246,1931319..1931324,
+ 1931337..1931339,1931439..1931441))
+ /locus_tag="SARI_02000"
+ /note="putative molybdopterin cofactor binding site
+ [chemical binding]; other site"
+ /db_xref="CDD:239171"
+ misc_feature complement(1929615..1929977)
+ /locus_tag="SARI_02000"
+ /note="The MopB_CT_DmsA-EC CD includes the DmsA enzyme of
+ the dmsABC operon encoding the anaerobic dimethylsulfoxide
+ reductase (DMSOR) of Escherichia coli and other related
+ DMSOR-like enzymes. Unlike other DMSOR-like enzymes, this
+ group has a predicted...; Region: MopB_CT_DmsA-EC;
+ cd02794"
+ /db_xref="CDD:239195"
+ misc_feature complement(order(1929639..1929644,1929690..1929692,
+ 1929744..1929746,1929927..1929935,1929939..1929941,
+ 1929948..1929953,1929957..1929959))
+ /locus_tag="SARI_02000"
+ /note="putative molybdopterin cofactor binding site; other
+ site"
+ /db_xref="CDD:239195"
+ gene complement(1932289..1933581)
+ /locus_tag="SARI_02001"
+ CDS complement(1932289..1933581)
+ /locus_tag="SARI_02001"
+ /inference="protein motif:FPrintScan:IPR002317"
+ /inference="protein motif:HMMPanther:IPR002317"
+ /inference="protein motif:HMMPfam:IPR002314"
+ /inference="protein motif:HMMPfam:IPR002317"
+ /inference="protein motif:HMMTigr:IPR002317"
+ /inference="protein motif:superfamily:IPR010978"
+ /inference="similar to AA sequence:INSD:AAX64823.1"
+ /note="'catalyzes a two-step reaction, first charging a
+ serine molecule by linking its carboxyl group to the
+ alpha-phosphate of ATP, followed by transfer of the
+ aminoacyl-adenylate to its tRNA'"
+ /codon_start=1
+ /transl_table=11
+ /product="seryl-tRNA synthetase"
+ /protein_id="YP_001571023.1"
+ /db_xref="GI:161503911"
+ /db_xref="InterPro:IPR002314"
+ /db_xref="InterPro:IPR002317"
+ /db_xref="InterPro:IPR010978"
+ /translation="MLDPNLLRNEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVNT
+ ENLQAERNSRSKSIGQAKARGEDIEPLRREVNKLGEELDAAKAELEALLAEIRDIALT
+ IPNLPADEVPVGKDENDNVEVSRWGTPREFDFEIRDHVTLGEMHSGLDFAAAVKLTGS
+ RFVVMRGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNHDTLYGTGQLPKFAGDLF
+ HTRPLEEEADSSNYALIPTAEVPLTNLVRDEIIDEDQLPIKMTAHTPCFRSEAGSYGR
+ DTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMG
+ FGACKTYDLEVWVPAQNTYREISSCSNIWDFQARRMQARCRSKSDKKTRLVHTLNGSG
+ LAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYIG"
+ misc_feature complement(1932292..1933581)
+ /locus_tag="SARI_02001"
+ /note="seryl-tRNA synthetase; Provisional; Region:
+ PRK05431"
+ /db_xref="CDD:235461"
+ misc_feature complement(1933261..1933581)
+ /locus_tag="SARI_02001"
+ /note="Seryl-tRNA synthetase N-terminal domain; Region:
+ Seryl_tRNA_N; pfam02403"
+ /db_xref="CDD:217020"
+ misc_feature complement(1932313..1933227)
+ /locus_tag="SARI_02001"
+ /note="Seryl-tRNA synthetase (SerRS) class II core
+ catalytic domain. SerRS is responsible for the attachment
+ of serine to the 3' OH group of ribose of the
+ appropriate tRNA. This domain It is primarily responsible
+ for ATP-dependent formation of the enzyme...; Region:
+ SerRS_core; cd00770"
+ /db_xref="CDD:238393"
+ misc_feature complement(order(1932313..1932318,1932724..1932726,
+ 1932787..1932789,1932835..1932837,1932847..1932849,
+ 1932859..1932861,1932886..1932888,1932898..1932900,
+ 1932925..1932930,1932982..1932984,1932988..1932996,
+ 1933000..1933011,1933048..1933050,1933057..1933059,
+ 1933063..1933065,1933069..1933071,1933081..1933101,
+ 1933108..1933125))
+ /locus_tag="SARI_02001"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238393"
+ misc_feature complement(order(1932391..1932393,1932409..1932411,
+ 1932415..1932417,1932508..1932519,1932709..1932711,
+ 1932715..1932717,1932721..1932723,1932730..1932732,
+ 1932736..1932738,1932745..1932747,1932754..1932756,
+ 1932772..1932774,1932778..1932780,1932865..1932867,
+ 1932871..1932873,1933102..1933104))
+ /locus_tag="SARI_02001"
+ /note="active site"
+ /db_xref="CDD:238393"
+ misc_feature complement(1932988..1933011)
+ /locus_tag="SARI_02001"
+ /note="motif 1; other site"
+ /db_xref="CDD:238393"
+ misc_feature complement(1932772..1932783)
+ /locus_tag="SARI_02001"
+ /note="motif 2; other site"
+ /db_xref="CDD:238393"
+ misc_feature complement(order(1932391..1932393,1932400..1932408))
+ /locus_tag="SARI_02001"
+ /note="motif 3; other site"
+ /db_xref="CDD:238393"
+ gene complement(1933833..1935119)
+ /locus_tag="SARI_02002"
+ CDS complement(1933833..1935119)
+ /locus_tag="SARI_02002"
+ /inference="protein motif:HMMPfam:IPR003959"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:superfamily:IPR008949"
+ /inference="similar to AA sequence:REFSEQ:NP_455450.1"
+ /note="'KEGG: pha:PSHAa1714 4.9e-139 rarA; polynucleotide
+ enzyme with nucleotide triphosphate hydrolase domain
+ K07478;
+ COG: COG2256 ATPase related to the helicase subunit of the
+ Holliday junction resolvase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="recombination factor protein RarA"
+ /protein_id="YP_001571024.1"
+ /db_xref="GI:161503912"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR003959"
+ /db_xref="InterPro:IPR008949"
+ /translation="MRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGK
+ TTLAEVIARYASADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKS
+ QQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLTIDDIEQVLDQAMQ
+ DKTRGYGDQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLLPALL
+ TEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRC
+ LAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAF
+ KAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEPNAYAAGEVYFPPEIA
+ KTRYYHPTNRGLEGKIGEKLAWLAEQDQNSPTKRYR"
+ misc_feature complement(1933860..1935119)
+ /locus_tag="SARI_02002"
+ /note="recombination factor protein RarA; Reviewed;
+ Region: PRK13342"
+ /db_xref="CDD:237355"
+ misc_feature complement(1934709..1935092)
+ /locus_tag="SARI_02002"
+ /note="The AAA+ (ATPases Associated with a wide variety of
+ cellular Activities) superfamily represents an ancient
+ group of ATPases belonging to the ASCE (for additional
+ strand, catalytic E) division of the P-loop NTPase fold.
+ The ASCE division also includes ABC; Region: AAA; cd00009"
+ /db_xref="CDD:99707"
+ misc_feature complement(1934985..1935008)
+ /locus_tag="SARI_02002"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(order(1934751..1934753,1934838..1934840,
+ 1934982..1935005))
+ /locus_tag="SARI_02002"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(1934835..1934852)
+ /locus_tag="SARI_02002"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(1934709..1934711)
+ /locus_tag="SARI_02002"
+ /note="arginine finger; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(1933869..1934375)
+ /locus_tag="SARI_02002"
+ /note="MgsA AAA+ ATPase C terminal; Region: MgsA_C;
+ pfam12002"
+ /db_xref="CDD:192911"
+ gene complement(1935186..1935800)
+ /gene="lolA"
+ /locus_tag="SARI_02003"
+ CDS complement(1935186..1935800)
+ /gene="lolA"
+ /locus_tag="SARI_02003"
+ /inference="protein motif:HMMPfam:IPR004564"
+ /inference="protein motif:HMMTigr:IPR004564"
+ /inference="similar to AA sequence:REFSEQ:NP_459937.1"
+ /note="participates with LolB in the incorporation of
+ lipoprotein into the outer membrane"
+ /codon_start=1
+ /transl_table=11
+ /product="outer-membrane lipoprotein carrier protein"
+ /protein_id="YP_001571025.1"
+ /db_xref="GI:161503913"
+ /db_xref="InterPro:IPR004564"
+ /translation="MMKKMAIACALLSSVVVSSVWADAASDLKSRLDKVSSFHASFTQ
+ KVTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATW
+ LKDATGNTPFMLIARNQSSDWQQYNIKQDGDNFVLTPKASNGNLKQFTINVGRDGTIH
+ QFSAVEQDDQRSAYQLKSQQNGAVDPSKFTFTPPQGVTIDDQRK"
+ misc_feature complement(1935192..1935800)
+ /gene="lolA"
+ /locus_tag="SARI_02003"
+ /note="Outer membrane lipoprotein-sorting protein [Cell
+ envelope biogenesis, outer membrane]; Region: LolA;
+ COG2834"
+ /db_xref="CDD:225390"
+ misc_feature complement(1935189..1935716)
+ /gene="lolA"
+ /locus_tag="SARI_02003"
+ /note="periplasmic chaperone LolA; Region: lolA;
+ TIGR00547"
+ /db_xref="CDD:129638"
+ gene complement(1935930..1939817)
+ /locus_tag="SARI_02004"
+ CDS complement(1935930..1939817)
+ /locus_tag="SARI_02004"
+ /inference="protein motif:HMMPfam:IPR002543"
+ /note="'KEGG: pen:PSEEN2212 6.0e-182 ftsK; cell division
+ protein FtsK;
+ COG: COG1674 DNA segregation ATPase FtsK/SpoIIIE and
+ related proteins;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA translocase FtsK"
+ /protein_id="YP_001571026.1"
+ /db_xref="GI:161503914"
+ /db_xref="InterPro:IPR002543"
+ /translation="MSVLASGGKSLEPGEPFLSQEYTEDKDVTLTKLSSGRRLLEALL
+ ILIALFAVWLMAALLSFNPSDPSWSQTAWHEPIHNLGGAPGAWLADTLFFIFGVMAYT
+ IPVIIVGGCWFAWRHQSTDDYIDYFAVSLRLIGVLALILTSCGLAAINADDIWYFASG
+ GVIGSLLSTTLQPLLHSSGGTITLLCIWAAGLTLFTGWSWVSIAEKLGGWLLNILTFA
+ SNRTRRDDTWVDDEEYEDEYDEETDGVQRESRRARILRGALARRKRLAAKFSNPRGRQ
+ TDAALFSGKRMDDGEDIQYSARGVAADPDDVLFSGNRATQPEYDEYDPLLNGHSVAEP
+ VAAAAAATAVTQTWATSADPVTQTPSMPEAVVAQPTVEWQPVPGPQTGEPVIAPAPEG
+ YPSHPQYAQPQAAQDAPWQQPAPVASAPKYAVSPAIAAEYESPAPQETQPQRQAPGVE
+ QHWQPEPTHQPTPVYQPDPVAAEPSHIPPVVEQPVVTEPEPVIEETRPARPPLYYFEE
+ VEEKRAREREQLAAWYQPIPEPIKETAPVKAAAPVKPSVSAAPSIPPVEAVAAAAGIK
+ SGALAAGAAAAAPAFGLATSGAPRPQVKEGIGPQLPRPNRVRVPTRRELASYGIKLPS
+ QRIAEEKAREAERYQYETGAQLTDEEIDAMHQDELARQFAQSQQHRYGEAYQHDTQQA
+ EDDDTAAEAELARQFAASQQQRYSGEQPAGAQPFSLDNLDFSPMKILVDEGPHEPLFT
+ PGVMPESAPIQQPVAPQPQYQQPQQPVAPQSQYQQPQQPAAPQDSLIHPLLMRNGDSR
+ PLQRPTTPLPSLDLLTPPPSEVEPVDTFALEQMARLVEARLADFRIKADVVNYSPGPV
+ ITRFELNLAPGVKAARISNLSRDLARSLSTVAVRVVEVIPGKPYVGLELPNKKRQTVY
+ LREVLDNAKFRDNPSPLTVVLGKDIAGDPVVADLAKMPHLLVAGTTGSGKSVGVNAMI
+ LSMLYKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWSVNEMERR
+ YKLMSALGVRNLAGYNEKIAEAARMGRPIPDPYWKPGDSMDVQHPVLEKLPYIVVLVD
+ EFADLMMTVGKKVEELIARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPTRIAFT
+ VSSKIDSRTILDQGGAESLLGMGDMLFSGPNSTMPVRVHGAFVRDQEVHAVVQDWKAR
+ GRPQYVDGITSDSESEGGGSFDGGEELDPLFDQAVNFVTQKRKASISGVQRQFRIGYN
+ RAARIIEQMEAQGIVSAQGHNGNREVLAPPPFE"
+ misc_feature complement(<1937580..1939766)
+ /locus_tag="SARI_02004"
+ /note="DNA translocase FtsK; Provisional; Region:
+ PRK10263"
+ /db_xref="CDD:236669"
+ misc_feature complement(1939194..1939670)
+ /locus_tag="SARI_02004"
+ /note="Domain of unknown function (DUF4117); Region:
+ DUF4117; pfam13491"
+ /db_xref="CDD:222173"
+ misc_feature complement(1935933..>1937468)
+ /locus_tag="SARI_02004"
+ /note="DNA translocase FtsK; Provisional; Region:
+ PRK10263"
+ /db_xref="CDD:236669"
+ misc_feature complement(1936434..1937078)
+ /locus_tag="SARI_02004"
+ /note="FtsK/SpoIIIE family; Region: FtsK_SpoIIIE;
+ pfam01580"
+ /db_xref="CDD:216584"
+ misc_feature complement(1935939..1936121)
+ /locus_tag="SARI_02004"
+ /note="Ftsk gamma domain; Region: Ftsk_gamma; pfam09397"
+ /db_xref="CDD:220220"
+ gene complement(1939901..1940395)
+ /locus_tag="SARI_02005"
+ CDS complement(1939901..1940395)
+ /locus_tag="SARI_02005"
+ /inference="protein motif:FPrintScan:IPR000485"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000485"
+ /inference="protein motif:HMMSmart:IPR000485"
+ /inference="protein motif:ScanRegExp:IPR000485"
+ /inference="protein motif:superfamily:IPR011008"
+ /inference="similar to AA sequence:REFSEQ:NP_459935.1"
+ /note="mediates a global response to leucine; acts as a
+ regulator for several genes involved in the high-affinity
+ branched-chain amino acid transport system"
+ /codon_start=1
+ /transl_table=11
+ /product="leucine-responsive transcriptional regulator"
+ /protein_id="YP_001571027.1"
+ /db_xref="GI:161503915"
+ /db_xref="InterPro:IPR000485"
+ /db_xref="InterPro:IPR011008"
+ /db_xref="InterPro:IPR011991"
+ /translation="MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTP
+ CLERVRRLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNAAVQKLEE
+ IQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLV
+ IKTR"
+ misc_feature complement(1939904..1940395)
+ /locus_tag="SARI_02005"
+ /note="leucine-responsive transcriptional regulator;
+ Provisional; Region: PRK11169"
+ /db_xref="CDD:183009"
+ misc_feature complement(<1940213..1940359)
+ /locus_tag="SARI_02005"
+ /note="Arsenical Resistance Operon Repressor and similar
+ prokaryotic, metal regulated homodimeric repressors. ARSR
+ subfamily of helix-turn-helix bacterial transcription
+ regulatory proteins (winged helix topology). Includes
+ several proteins that appear to...; Region: HTH_ARSR;
+ cd00090"
+ /db_xref="CDD:238042"
+ misc_feature complement(order(1940213..1940218,1940234..1940239,
+ 1940243..1940248,1940255..1940260,1940264..1940275,
+ 1940300..1940308,1940348..1940356))
+ /locus_tag="SARI_02005"
+ /note="putative DNA binding site [nucleotide binding];
+ other site"
+ /db_xref="CDD:238042"
+ misc_feature complement(order(1940297..1940299,1940306..1940308))
+ /locus_tag="SARI_02005"
+ /note="putative Zn2+ binding site [ion binding]; other
+ site"
+ /db_xref="CDD:238042"
+ misc_feature complement(1939940..1940164)
+ /locus_tag="SARI_02005"
+ /note="AsnC family; Region: AsnC_trans_reg; pfam01037"
+ /db_xref="CDD:216258"
+ gene 1940942..1941910
+ /locus_tag="SARI_02006"
+ CDS 1940942..1941910
+ /locus_tag="SARI_02006"
+ /inference="protein motif:BlastProDom:IPR001327"
+ /inference="protein motif:HMMPfam:IPR001327"
+ /inference="protein motif:HMMPfam:IPR013027"
+ /inference="protein motif:HMMTigr:IPR005982"
+ /inference="protein motif:ScanRegExp:IPR008255"
+ /inference="similar to AA sequence:INSD:AAV77753.1"
+ /note="catalyzes the transfer of electrons from NADPH to
+ thioredoxin; FAD/NAD(P) binding"
+ /codon_start=1
+ /transl_table=11
+ /product="thioredoxin reductase"
+ /protein_id="YP_001571028.1"
+ /db_xref="GI:161503916"
+ /db_xref="InterPro:IPR001327"
+ /db_xref="InterPro:IPR005982"
+ /db_xref="InterPro:IPR008255"
+ /db_xref="InterPro:IPR013027"
+ /translation="MGTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQL
+ TTTTEVENWPGDPNDLTGPLLMERMHEHAEKFATEIIFDHINSVDLQNRPFRLKGDSG
+ EYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVE
+ EALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIVLHTNRTLEEVTGDQMGV
+ TGLRLRDTQQSDNIETLDIAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGTHGNATQ
+ TSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDSLADTSE"
+ misc_feature 1940942..1941898
+ /locus_tag="SARI_02006"
+ /note="thioredoxin reductase; Provisional; Region:
+ PRK10262"
+ /db_xref="CDD:182343"
+ misc_feature <1941095..1941481
+ /locus_tag="SARI_02006"
+ /note="NAD(P)-binding Rossmann-like domain; Region:
+ NAD_binding_8; cl17500"
+ /db_xref="CDD:248054"
+ misc_feature 1941383..1941598
+ /locus_tag="SARI_02006"
+ /note="Pyridine nucleotide-disulphide oxidoreductase;
+ Region: Pyr_redox; pfam00070"
+ /db_xref="CDD:215691"
+ gene 1942026..1943792
+ /locus_tag="SARI_02007"
+ CDS 1942026..1943792
+ /locus_tag="SARI_02007"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR001140"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /note="in Escherichia coli the CydCD ABC transporter
+ exports cysteine and glutathione into the periplasm in
+ order to maintain redox balance; important for cytochrome
+ bd and c"
+ /codon_start=1
+ /transl_table=11
+ /product="cysteine/glutathione ABC transporter
+ membrane/ATP-binding component"
+ /protein_id="YP_001571029.1"
+ /db_xref="GI:161503917"
+ /db_xref="InterPro:IPR001140"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MNKTRQKELTRWLKQQSAISQRWLNISRLLGFMSGVLIVAQAWI
+ MARILQYMIMENIPREALLLPFTLLILVFVLRAWVVWLRERVGFHAGQHIRFEIRRQV
+ LDRLQQAGPAWIQGKPAGSWATLVMEQIDNMHDYYARYLPQMALAVCVPLLIVAAIFP
+ SNWAAALILLGTAPLIPLFMAMVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIF
+ GRGEAETESIRAASQDFRQRTMEVLRLAFLSSGVLEFFTSLSIALVAVYFGFSYLGEL
+ NFGHYGTGVTLAAGFLALILAPEFFQPLRDLGTFYHAKAQAVGAADSLKTFLETPLAH
+ PARGEVELAENEPVTIDAVNLIITSPEGKTLAGPLNFSLAAGERVVLVGRSGSGKSSL
+ LNVLSGFLSYQGSLRINGVELRDLSPESWRRHLSWVGQNPQLPAATLRENVLLARPDA
+ SEQELHAALDAAWVSEFLPLLPQGVDTPLGNHASRLSVGQAQRVAVARALLNPCQLLL
+ LDEPAASLDAHSEQRVMQALKAASKRQTTLMVTHQLEDLADWDAIWVMQDGAIVEQGS
+ YAELSVANGAFAMLLAHRQEDI"
+ misc_feature 1942026..1943789
+ /locus_tag="SARI_02007"
+ /note="cysteine/glutathione ABC transporter
+ membrane/ATP-binding component; Reviewed; Region:
+ PRK11174"
+ /db_xref="CDD:236870"
+ misc_feature 1942095..1942901
+ /locus_tag="SARI_02007"
+ /note="ABC transporter transmembrane region; Region:
+ ABC_membrane; pfam00664"
+ /db_xref="CDD:216049"
+ misc_feature 1943097..1943765
+ /locus_tag="SARI_02007"
+ /note="ATP-binding cassette transporter nucleotide-binding
+ domain; Region: ABC_ATPase; cl17201"
+ /db_xref="CDD:247755"
+ misc_feature 1943172..1943195
+ /locus_tag="SARI_02007"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature order(1943181..1943186,1943190..1943198,1943313..1943315,
+ 1943553..1943558,1943649..1943651)
+ /locus_tag="SARI_02007"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213179"
+ misc_feature 1943304..1943315
+ /locus_tag="SARI_02007"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213179"
+ misc_feature order(1943481..1943492,1943493..1943507)
+ /locus_tag="SARI_02007"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213179"
+ misc_feature 1943541..1943558
+ /locus_tag="SARI_02007"
+ /note="Walker B; other site"
+ /db_xref="CDD:213179"
+ misc_feature 1943565..1943576
+ /locus_tag="SARI_02007"
+ /note="D-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature 1943637..1943657
+ /locus_tag="SARI_02007"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213179"
+ gene 1943793..1945514
+ /locus_tag="SARI_02008"
+ CDS 1943793..1945514
+ /locus_tag="SARI_02008"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:REFSEQ:YP_151067.1"
+ /note="in Escherichia coli the CydCD ABC transporter
+ exports cysteine and glutathione into the periplasm in
+ order to maintain redox balance; important for cytochrome
+ bd and c"
+ /codon_start=1
+ /transl_table=11
+ /product="cysteine/glutathione ABC transporter
+ membrane/ATP-binding component"
+ /protein_id="YP_001571030.1"
+ /db_xref="GI:161503918"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MRALLPYLTLYKRHKWMLTLGIALAILTLLASIGLLTLSGWFLS
+ ASAIAGFAGIYSFNYMLPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSK
+ LLPLSPAGLARYQQGELLNRIVADVDTLDHLYLRVISPLVGAFVVIMIVTLGLSVLDF
+ TLAITLGGIMLLTLFIMPPVFYRAGKNTGQNLTYLRGQYRQQLTSWLQGQAELTIFGA
+ SKRYRAQMEATELQWHEAQRRQSELTALSQALMLLIGALAVMLMLWMASGGVGGNTQP
+ GALIALFVFCALAAFEALAPVTGAFQHLGQVIASALRITELTEQKPEVTFPQTESIAP
+ ENVTLTLRDVSFHYPGQPINALNALSLQATPGEHIAILGRTGCGKSTLLQLLTRARDP
+ QQGEILVNGLPLSSLSESALRRTISVVPQRVHLFSATLRDNLLLAAPNASDDALSDML
+ RRVGLEKLLEDSGLNSWLGEGGRLLSGGELRRLAIARALLHDAPLMLLDEPTEGLDAT
+ TESEMLELLADVMRQKTVLMVTHRLRGLARFDQIIVMDDGRIIERGTHAELLAGQGRY
+ YQFKQRL"
+ misc_feature 1943793..1945511
+ /locus_tag="SARI_02008"
+ /note="cysteine/glutathione ABC transporter
+ membrane/ATP-binding component; Reviewed; Region:
+ PRK11160"
+ /db_xref="CDD:236865"
+ misc_feature <1944057..1944647
+ /locus_tag="SARI_02008"
+ /note="ABC transporter transmembrane region; Region:
+ ABC_membrane; pfam00664"
+ /db_xref="CDD:216049"
+ misc_feature 1944807..1945454
+ /locus_tag="SARI_02008"
+ /note="ATP-binding cassette transporter nucleotide-binding
+ domain; Region: ABC_ATPase; cl17201"
+ /db_xref="CDD:247755"
+ misc_feature 1944909..1944932
+ /locus_tag="SARI_02008"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature order(1944918..1944923,1944927..1944935,1945053..1945055,
+ 1945287..1945292,1945383..1945385)
+ /locus_tag="SARI_02008"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213179"
+ misc_feature 1945044..1945055
+ /locus_tag="SARI_02008"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213179"
+ misc_feature order(1945104..1945118,1945140..1945154)
+ /locus_tag="SARI_02008"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213179"
+ misc_feature 1945275..1945292
+ /locus_tag="SARI_02008"
+ /note="Walker B; other site"
+ /db_xref="CDD:213179"
+ misc_feature 1945299..1945310
+ /locus_tag="SARI_02008"
+ /note="D-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature 1945371..1945391
+ /locus_tag="SARI_02008"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213179"
+ unsure 1945151..1945154
+ /locus_tag="SARI_02008"
+ /note="Sequence derived from one plasmid subclone"
+ gene 1945559..1946263
+ /gene="aat"
+ /locus_tag="SARI_02009"
+ CDS 1945559..1946263
+ /gene="aat"
+ /locus_tag="SARI_02009"
+ /inference="protein motif:BlastProDom:IPR004616"
+ /inference="protein motif:HMMPfam:IPR004616"
+ /inference="protein motif:HMMTigr:IPR004616"
+ /inference="similar to AA sequence:INSD:AAV77756.1"
+ /note="'leucyltransferase; phenylalanyltransferse;
+ functions in the N-end rule pathway; transfers Leu, Phe,
+ Met, from aminoacyl-tRNAs to N-terminal of proteins with
+ Arg or Lys'"
+ /codon_start=1
+ /transl_table=11
+ /product="leucyl/phenylalanyl-tRNA--protein transferase"
+ /protein_id="YP_001571031.1"
+ /db_xref="GI:161503919"
+ /db_xref="InterPro:IPR004616"
+ /translation="MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQH
+ GIFPWFSPGDPILWWSPDPRAVLWPEEFHLSRSMKRFHNTSPYRVTLNYAFDRVIDGC
+ TNHRDEGTWITRGIEEAYRRLHELGHAHSIEVWRDQELVGGMYGVSQGALFCGESMFS
+ RKENASKTALLVFCAEFIHHGGKLIDCQVLNSHTASLGAIEIPRCDYLEHLSRLRQQP
+ LVSRFWVPRTLFLPRK"
+ misc_feature 1945559..1946257
+ /gene="aat"
+ /locus_tag="SARI_02009"
+ /note="leucyl/phenylalanyl-tRNA--protein transferase;
+ Reviewed; Region: aat; PRK00301"
+ /db_xref="CDD:234720"
+ gene 1946574..1946792
+ /gene="infA"
+ /locus_tag="SARI_02010"
+ CDS 1946574..1946792
+ /gene="infA"
+ /locus_tag="SARI_02010"
+ /inference="protein motif:Gene3D:IPR012340"
+ /inference="protein motif:HMMPfam:IPR006196"
+ /inference="protein motif:HMMSmart:IPR003029"
+ /inference="protein motif:HMMTigr:IPR004368"
+ /inference="protein motif:superfamily:IPR008994"
+ /inference="similar to AA sequence:INSD:ABE06384.1"
+ /note="'stimulates the activities of the other two
+ initiation factors, IF-2 and IF-3'"
+ /codon_start=1
+ /transl_table=11
+ /product="translation initiation factor IF-1"
+ /protein_id="YP_001571032.1"
+ /db_xref="GI:161503920"
+ /db_xref="InterPro:IPR003029"
+ /db_xref="InterPro:IPR004368"
+ /db_xref="InterPro:IPR006196"
+ /db_xref="InterPro:IPR008994"
+ /db_xref="InterPro:IPR012340"
+ /translation="MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNY
+ IRILTGDKVTVELTPYDLSKGRIVFRSR"
+ misc_feature 1946592..1946783
+ /gene="infA"
+ /locus_tag="SARI_02010"
+ /note="S1_IF1: Translation Initiation Factor IF1, S1-like
+ RNA-binding domain. IF1 contains an S1-like RNA-binding
+ domain, which is found in a wide variety of RNA-associated
+ proteins. Translation initiation includes a number of
+ interrelated steps preceding the...; Region: S1_IF1;
+ cd04451"
+ /db_xref="CDD:239898"
+ misc_feature order(1946616..1946624,1946640..1946642,1946676..1946678,
+ 1946685..1946690,1946703..1946714,1946763..1946765,
+ 1946769..1946771)
+ /gene="infA"
+ /locus_tag="SARI_02010"
+ /note="rRNA binding site [nucleotide binding]; other site"
+ /db_xref="CDD:239898"
+ misc_feature order(1946676..1946678,1946688..1946690,1946781..1946783)
+ /gene="infA"
+ /locus_tag="SARI_02010"
+ /note="predicted 30S ribosome binding site; other site"
+ /db_xref="CDD:239898"
+ gene complement(1946885..1947796)
+ /locus_tag="SARI_02011"
+ CDS complement(1946885..1947796)
+ /locus_tag="SARI_02011"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="protein motif:HMMPfam:IPR005119"
+ /inference="similar to AA sequence:REFSEQ:YP_215893.1"
+ /note="'KEGG: shn:Shewana3_3435 1.8e-05 transcriptional
+ regulator, LysR family K06022;
+ COG: COG0583 Transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571033.1"
+ /db_xref="GI:161503921"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR005119"
+ /db_xref="InterPro:IPR011991"
+ /translation="MMKMDLNDFAWFVHVVEEGGFAAAGRALNEPKSKLSRRIAQLEE
+ RLGVRLIQRTTRQFNVTEVGQTFYEHCKAMLVEAQAAQDAIAALQVEPRGIVKLTCPV
+ TLLHVHIGPMLAKFMARYPDVSLQLEATNRRVDVVGEGVDVAIRVRPRPFEDSDLVMR
+ VLADRGHRLFASPDLIARMGSPSAPAELSHWPGLSLASGKHIYRWELYGPQGARAEVH
+ FTPRMITTDMLALREAAMAGVGLVQLPILMVKEQLAAGELVAVLEAWEPRREVIHAVF
+ PSRRGLLPSVRALVDFLTEEYARMAEE"
+ misc_feature complement(1946888..1947790)
+ /locus_tag="SARI_02011"
+ /note="LysR family transcriptional regulator; Provisional;
+ Region: PRK14997"
+ /db_xref="CDD:184959"
+ misc_feature complement(1947602..1947781)
+ /locus_tag="SARI_02011"
+ /note="Bacterial regulatory helix-turn-helix protein, lysR
+ family; Region: HTH_1; pfam00126"
+ /db_xref="CDD:215735"
+ misc_feature complement(1946918..1947523)
+ /locus_tag="SARI_02011"
+ /note="The C-terminal substrate binding domain of an
+ uncharacterized LysR-type transcriptional regulator
+ CrgA-like, contains the type 2 periplasmic binding fold;
+ Region: PBP2_CrgA_like_4; cd08473"
+ /db_xref="CDD:176162"
+ misc_feature complement(order(1946981..1946983,1947062..1947064,
+ 1947113..1947115,1947302..1947304,1947308..1947310,
+ 1947356..1947358,1947473..1947475,1947485..1947487))
+ /locus_tag="SARI_02011"
+ /note="putative effector binding pocket; other site"
+ /db_xref="CDD:176162"
+ misc_feature complement(order(1947086..1947088,1947095..1947100,
+ 1947119..1947133,1947221..1947223,1947410..1947430,
+ 1947434..1947436,1947446..1947448,1947455..1947460,
+ 1947464..1947469,1947479..1947484))
+ /locus_tag="SARI_02011"
+ /note="putative dimerization interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:176162"
+ unsure 1947593..1947908
+ /note="Sequence derived from one plasmid subclone"
+ gene 1947905..1948765
+ /locus_tag="SARI_02012"
+ CDS 1947905..1948765
+ /locus_tag="SARI_02012"
+ /inference="protein motif:HMMPanther:IPR012093"
+ /inference="protein motif:HMMPfam:IPR003829"
+ /inference="protein motif:HMMPfam:IPR008778"
+ /inference="protein motif:HMMPIR:IPR012093"
+ /inference="protein motif:superfamily:IPR011051"
+ /inference="similar to AA sequence:REFSEQ:YP_215892.1"
+ /note="'KEGG: shn:Shewana3_3385 3.6e-33 hypoxanTHIne
+ phosphoribosyltransferase K00760;
+ COG: COG1741 Pirin-related protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571034.1"
+ /db_xref="GI:161503922"
+ /db_xref="InterPro:IPR003829"
+ /db_xref="InterPro:IPR008778"
+ /db_xref="InterPro:IPR011051"
+ /db_xref="InterPro:IPR012093"
+ /translation="MKQITGVYTAPRPHWVGDGFPVRSLFSYQSHTQQLSPFLLLDYA
+ GPHTFTPGNEKRGVGEHPHRGFETVTIVYSGEVEHRDSTGRGGVIGPGDVQWMTAGAG
+ ILHEEFHSDAFTRQGGELEMVQLWVNLPMKDKMTTPAYQSITQDVIPTVTLPDDAGTM
+ RVIAGRYEEAKGPADTFSPLNVWDMRLLRDRQLTLSQPEGWSTALVVLKGNITLNGTT
+ PVNEAQLVVLSQQGKTLHFETSSDASVLLLSGEPLNEPIVGYGPFVMNTKQEIAEAVR
+ DFNSGRFGQI"
+ misc_feature 1947905..1948756
+ /locus_tag="SARI_02012"
+ /note="Pirin-related protein [General function prediction
+ only]; Region: COG1741"
+ /db_xref="CDD:224655"
+ misc_feature 1947959..1948285
+ /locus_tag="SARI_02012"
+ /note="Pirin; Region: Pirin; pfam02678"
+ /db_xref="CDD:217181"
+ misc_feature 1948448..1948756
+ /locus_tag="SARI_02012"
+ /note="Pirin C-terminal cupin domain; Region: Pirin_C;
+ pfam05726"
+ /db_xref="CDD:203319"
+ gene 1948770..1949462
+ /locus_tag="SARI_02013"
+ CDS 1948770..1949462
+ /locus_tag="SARI_02013"
+ /inference="protein motif:Gene3D:IPR000868"
+ /inference="protein motif:HMMPfam:IPR000868"
+ /inference="protein motif:superfamily:IPR000868"
+ /inference="similar to AA sequence:REFSEQ:NP_459926.1"
+ /note="'KEGG: psp:PSPPH_0909 1.1e-47 isochorismatase
+ family protein K05993;
+ COG: COG1335 Amidases related to nicotinamidase;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571035.1"
+ /db_xref="GI:161503923"
+ /db_xref="InterPro:IPR000868"
+ /translation="MKENTMSSPANFNGLRPVIDVNDSVMLLIDHQSGLFQTVGDMPL
+ PELRARAAALAKMAMLAKMPVITTASVPQGPNGPLIPEIHANAPHAQYIARKGEINAW
+ DNEDFVNAVKATGRKTLIIAGTITSVCMAFPAISAVAEGYKVFAVIDASGTYSKMAQE
+ ITLARIVQAGVVPMDTAAVASEMQGTWNREDAAAWAEVYTQVFPAYQLLMESYSKAQD
+ VVKNNERLDSQR"
+ misc_feature 1948839..1949303
+ /locus_tag="SARI_02013"
+ /note="Isochorismatase family; Region: Isochorismatase;
+ pfam00857"
+ /db_xref="CDD:216156"
+ misc_feature 1948842..1949324
+ /locus_tag="SARI_02013"
+ /note="YcaC related amidohydrolases; E.coli YcaC is an
+ homooctameric hydrolase with unknown specificity. Despite
+ its weak sequence similarity, it is structurally related
+ to other amidohydrolases and shares conserved active site
+ residues with them; Region: YcaC_related; cd01012"
+ /db_xref="CDD:238494"
+ misc_feature order(1948857..1948859,1949052..1949054,1949154..1949156)
+ /locus_tag="SARI_02013"
+ /note="catalytic triad [active]"
+ /db_xref="CDD:238494"
+ misc_feature order(1948866..1948868,1948875..1948877,1949013..1949015)
+ /locus_tag="SARI_02013"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238494"
+ misc_feature 1949139..1949144
+ /locus_tag="SARI_02013"
+ /note="conserved cis-peptide bond; other site"
+ /db_xref="CDD:238494"
+ gene 1949610..1949694
+ /locus_tag="SARI_02014"
+ tRNA 1949610..1949694
+ /locus_tag="SARI_02014"
+ /product="tRNA-Ser"
+ gene complement(1949743..1950060)
+ /locus_tag="SARI_02015"
+ CDS complement(1949743..1950060)
+ /locus_tag="SARI_02015"
+ /inference="similar to AA sequence:INSD:"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571036.1"
+ /db_xref="GI:161503924"
+ /translation="MAVRGGLTRCARPAGSLFAGSSSVQLAAPVVEPRPGVLIPPVRW
+ RNAKKKPVLSYELFFEDGGEGGLTRCARPAGSLLAGSSSVQLAAPVVEPRTGVFIPPG
+ KVA"
+ gene complement(1950205..1952481)
+ /gene="clpA"
+ /locus_tag="SARI_02016"
+ CDS complement(1950205..1952481)
+ /gene="clpA"
+ /locus_tag="SARI_02016"
+ /inference="protein motif:HMMPfam:IPR003959"
+ /inference="protein motif:HMMPfam:IPR004176"
+ /inference="protein motif:HMMPfam:IPR013093"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR013461"
+ /inference="protein motif:ScanRegExp:IPR001270"
+ /note="ATPase and specificity subunit of the ClpA-ClpP ATP
+ dependent serine protease; directs protease to specific
+ substrates"
+ /codon_start=1
+ /transl_table=11
+ /product="ATP-dependent Clp protease ATP-binding subunit"
+ /protein_id="YP_001571037.1"
+ /db_xref="GI:161503925"
+ /db_xref="InterPro:IPR001270"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR003959"
+ /db_xref="InterPro:IPR004176"
+ /db_xref="InterPro:IPR013093"
+ /db_xref="InterPro:IPR013461"
+ /translation="MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREAL
+ EACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRSE
+ VTGANVLVAIFSEQESQAAYLLRKHEVSRLDIVNFISHGTRKDEPSQSSDLGNQSTGD
+ EQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGV
+ GKTAIAEGLAWRIVQGDVPEVMADCILYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ
+ DTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKD
+ RALARRFQKIDITEPSVEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDR
+ HLPDKAIDVIDEAGARARLLPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLK
+ NLGDRLKMLVFGQDNAIEALTEAIKMSRAGLGHEHKPVGSFLFAGPTGVGKTEVTVQL
+ SKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEI
+ EKAHPDVFNLLLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDN
+ STDAMGEIKKVFTPEFRNRLDNIIWFDHLSGEVIHQVVDKFIVELQAQLDQKGVSLEV
+ SQEARDWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKN
+ ALTYGFQSAQKHKPEAAH"
+ misc_feature complement(1950208..1952481)
+ /gene="clpA"
+ /locus_tag="SARI_02016"
+ /note="ATP-dependent Clp protease ATP-binding subunit;
+ Provisional; Region: clpA; PRK11034"
+ /db_xref="CDD:236828"
+ misc_feature complement(1952293..1952445)
+ /gene="clpA"
+ /locus_tag="SARI_02016"
+ /note="Clp amino terminal domain; Region: Clp_N;
+ pfam02861"
+ /db_xref="CDD:217254"
+ misc_feature complement(1951450..1951917)
+ /gene="clpA"
+ /locus_tag="SARI_02016"
+ /note="The AAA+ (ATPases Associated with a wide variety of
+ cellular Activities) superfamily represents an ancient
+ group of ATPases belonging to the ASCE (for additional
+ strand, catalytic E) division of the P-loop NTPase fold.
+ The ASCE division also includes ABC; Region: AAA; cd00009"
+ /db_xref="CDD:99707"
+ misc_feature complement(1951819..1951842)
+ /gene="clpA"
+ /locus_tag="SARI_02016"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(order(1951513..1951515,1951627..1951629,
+ 1951816..1951839))
+ /gene="clpA"
+ /locus_tag="SARI_02016"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(1951624..1951641)
+ /gene="clpA"
+ /locus_tag="SARI_02016"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(1951462..1951464)
+ /gene="clpA"
+ /locus_tag="SARI_02016"
+ /note="arginine finger; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(1950631..1951101)
+ /gene="clpA"
+ /locus_tag="SARI_02016"
+ /note="The AAA+ (ATPases Associated with a wide variety of
+ cellular Activities) superfamily represents an ancient
+ group of ATPases belonging to the ASCE (for additional
+ strand, catalytic E) division of the P-loop NTPase fold.
+ The ASCE division also includes ABC; Region: AAA; cd00009"
+ /db_xref="CDD:99707"
+ misc_feature complement(1950976..1950999)
+ /gene="clpA"
+ /locus_tag="SARI_02016"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(order(1950664..1950666,1950790..1950792,
+ 1950973..1950996))
+ /gene="clpA"
+ /locus_tag="SARI_02016"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(1950787..1950804)
+ /gene="clpA"
+ /locus_tag="SARI_02016"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(1950283..1950525)
+ /gene="clpA"
+ /locus_tag="SARI_02016"
+ /note="C-terminal, D2-small domain, of ClpB protein;
+ Region: ClpB_D2-small; pfam10431"
+ /db_xref="CDD:204486"
+ unsure 1950998..1951096
+ /note="Sequence derived from one plasmid subclone"
+ unsure 1951800..1951929
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(1952512..1952832)
+ /gene="clpS"
+ /locus_tag="SARI_02017"
+ CDS complement(1952512..1952832)
+ /gene="clpS"
+ /locus_tag="SARI_02017"
+ /inference="protein motif:HMMPfam:IPR003769"
+ /inference="similar to AA sequence:INSD:AAL19880.1"
+ /note="involved in the modulation of the specificity of
+ the ClpAP-mediated ATP-dependent protein degradation;
+ binds to the N-terminal domain of the chaperone ClpA"
+ /codon_start=1
+ /transl_table=11
+ /product="ATP-dependent Clp protease adaptor protein ClpS"
+ /protein_id="YP_001571038.1"
+ /db_xref="GI:161503926"
+ /db_xref="InterPro:IPR003769"
+ /translation="MGKTNDWLDFDQLVEDDLRDALKPPSMYKVILVNDDYTPMEFVI
+ DVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVEMVNQYARENEHPLLCT
+ LEKA"
+ misc_feature complement(1952515..1952832)
+ /gene="clpS"
+ /locus_tag="SARI_02017"
+ /note="ATP-dependent Clp protease adaptor protein ClpS;
+ Reviewed; Region: clpS; PRK00033"
+ /db_xref="CDD:178809"
+ gene 1953156..1953377
+ /locus_tag="SARI_02018"
+ CDS 1953156..1953377
+ /locus_tag="SARI_02018"
+ /inference="protein motif:BlastProDom:IPR002059"
+ /inference="protein motif:FPrintScan:IPR002059"
+ /inference="protein motif:Gene3D:IPR012340"
+ /inference="protein motif:HMMPfam:IPR002059"
+ /inference="protein motif:HMMPIR:IPR012156"
+ /inference="protein motif:HMMSmart:IPR011129"
+ /inference="protein motif:HMMTigr:IPR012751"
+ /inference="protein motif:ScanRegExp:IPR002059"
+ /inference="protein motif:superfamily:IPR008994"
+ /inference="similar to AA sequence:INSD:AAX64804.1"
+ /note="'COG: COG1278 Cold shock proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571039.1"
+ /db_xref="GI:161503927"
+ /db_xref="InterPro:IPR002059"
+ /db_xref="InterPro:IPR008994"
+ /db_xref="InterPro:IPR011129"
+ /db_xref="InterPro:IPR012156"
+ /db_xref="InterPro:IPR012340"
+ /db_xref="InterPro:IPR012751"
+ /translation="METGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKA
+ GQSVRFDVHQGPKGNHASVIVPIEAEAVA"
+ misc_feature 1953162..1953353
+ /locus_tag="SARI_02018"
+ /note="Cold-Shock Protein (CSP) contains an S1-like
+ cold-shock domain (CSD) that is found in eukaryotes,
+ prokaryotes, and archaea. CSP's include the major
+ cold-shock proteins CspA and CspB in bacteria and the
+ eukaryotic gene regulatory factor Y-box...; Region:
+ CSP_CDS; cd04458"
+ /db_xref="CDD:239905"
+ misc_feature order(1953177..1953179,1953204..1953206,1953237..1953239,
+ 1953324..1953326)
+ /locus_tag="SARI_02018"
+ /note="DNA-binding site [nucleotide binding]; DNA binding
+ site"
+ /db_xref="CDD:239905"
+ misc_feature order(1953195..1953215,1953234..1953245)
+ /locus_tag="SARI_02018"
+ /note="RNA-binding motif; other site"
+ /db_xref="CDD:239905"
+ gene complement(1953332..1953457)
+ /locus_tag="SARI_02019"
+ CDS complement(1953332..1953457)
+ /locus_tag="SARI_02019"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571040.1"
+ /db_xref="GI:161503928"
+ /translation="MLSARNKNASRSGWHFASWMYTMRQRSYATASASMGTMTLA"
+ gene complement(1953530..1955476)
+ /locus_tag="SARI_02020"
+ CDS complement(1953530..1955476)
+ /locus_tag="SARI_02020"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003838"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /note="with MacA is involved in the export of macrolide"
+ /codon_start=1
+ /transl_table=11
+ /product="macrolide transporter ATP-binding /permease
+ protein"
+ /protein_id="YP_001571041.1"
+ /db_xref="GI:161503929"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR003838"
+ /translation="MTALLELRNIRRSYPSGEEQVEVLKDISLQIHAGEMVAIVGVSG
+ SGKSTLMNILGCLDKPTSGTYRVAGRDVSMLDPDALAQLRREHFGFIFQRYHLLSHLT
+ AAQNVEVPAVYAGIERKKRQARARELLQRLGLSDRVDYHPSQLSGGQQQRVSIARALM
+ NGGQVILADEPTGALDSHSGEEVMAILRQLRDRGHTVIIVTHDPLVAAQAGRVIEIHD
+ GKIVHNPPAQENGREQGVAAAAVNTASGWRQFASSFREALAMAWLAMAANKMRTLLTM
+ LGIIIGIASVVSIVVVGDAAKQMVLADIRAMGTNTIDIHPGKDFGDDNPQYRQVLKYD
+ DLAAIQKQPWVNSATPTVSKSLRLRYGNMDIAVNANGVSGDYFNVYGMSFSEGNTFNV
+ VQQRDRAQVVVLDANTRRQLFPNQANVVGEVVLVGNMPVIVIGVAEEKPSMYGNRNLL
+ QVWLPYSTMSDRIMGQSWLNSITVRVKDGVNSDQAEQQLTRLLTLRHGQKDFFTWNMD
+ SILKTAEKTTYTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARAS
+ DVLQQFLIEAVLVCLVGGALGISLSMLIAFMLQLFLPGWEISFSLIALASAFLCSTFT
+ GILFGWLPARNAARLDPVDALARE"
+ misc_feature complement(1953533..1955476)
+ /locus_tag="SARI_02020"
+ /note="macrolide transporter ATP-binding /permease
+ protein; Provisional; Region: PRK10535"
+ /db_xref="CDD:182528"
+ misc_feature complement(1954814..1955464)
+ /locus_tag="SARI_02020"
+ /note="ATP-binding cassette domain of the transporters
+ involved in export of lipoprotein and macrolide, and cell
+ division protein; Region: ABC_MJ0796_LolCDE_FtsE; cd03255"
+ /db_xref="CDD:213222"
+ misc_feature complement(1955333..1955356)
+ /locus_tag="SARI_02020"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213222"
+ misc_feature complement(order(1954871..1954873,1954967..1954972,
+ 1955198..1955200,1955330..1955338,1955342..1955347))
+ /locus_tag="SARI_02020"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213222"
+ misc_feature complement(1955198..1955209)
+ /locus_tag="SARI_02020"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213222"
+ misc_feature complement(1955015..1955044)
+ /locus_tag="SARI_02020"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213222"
+ misc_feature complement(1954967..1954984)
+ /locus_tag="SARI_02020"
+ /note="Walker B; other site"
+ /db_xref="CDD:213222"
+ misc_feature complement(1954949..1954960)
+ /locus_tag="SARI_02020"
+ /note="D-loop; other site"
+ /db_xref="CDD:213222"
+ misc_feature complement(1954865..1954885)
+ /locus_tag="SARI_02020"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213222"
+ misc_feature complement(1954001..1954675)
+ /locus_tag="SARI_02020"
+ /note="MacB-like periplasmic core domain; Region:
+ MacB_PCD; pfam12704"
+ /db_xref="CDD:221725"
+ misc_feature complement(1953554..1953898)
+ /locus_tag="SARI_02020"
+ /note="FtsX-like permease family; Region: FtsX; pfam02687"
+ /db_xref="CDD:217187"
+ gene complement(1955473..1956591)
+ /locus_tag="SARI_02021"
+ CDS complement(1955473..1956591)
+ /locus_tag="SARI_02021"
+ /inference="protein motif:HMMPfam:IPR006143"
+ /inference="protein motif:HMMTigr:IPR006143"
+ /inference="protein motif:superfamily:IPR011053"
+ /inference="protein motif:superfamily:IPR011055"
+ /inference="similar to AA sequence:INSD:AAV77769.1"
+ /note="confers macrolide resistance via active drug
+ efflux"
+ /codon_start=1
+ /transl_table=11
+ /product="macrolide transporter subunit MacA"
+ /protein_id="YP_001571042.1"
+ /db_xref="GI:161503930"
+ /db_xref="InterPro:IPR006143"
+ /db_xref="InterPro:IPR011053"
+ /db_xref="InterPro:IPR011055"
+ /translation="MRAKEKKFKKRYLVIILILLVGGMAIWRMLNAPLPNYQTLIVRP
+ GDLEQSVLATGKLDALRKVDVGAQVSGQLKTLLVSIGDNVKKDQLLGVIDPEQAENQI
+ KEVEATLMELNAERQQAAAELKLARVTLTRRQQLAKTQSVSQQDLDTAATELAVKQAR
+ IGTIDAQIKRNQASLDTAKTNLEYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTL
+ ADMSTMLVKAQVSEADVIHLRPGQKAWFTIPGDPQTRYEGVLKDILPTPEKVNDAIFY
+ YARFEVPNPKRILRLDMTAQVYIQLMDVKNVLIIPLAALGEPVDNNRYKVALLRNGEK
+ REREVVIGERNDTDVEVVKGLEAGDEVIIGEGRPGATP"
+ misc_feature complement(1955479..1956582)
+ /locus_tag="SARI_02021"
+ /note="macrolide transporter subunit MacA; Provisional;
+ Region: PRK11578"
+ /db_xref="CDD:183211"
+ misc_feature complement(1956271..1956411)
+ /locus_tag="SARI_02021"
+ /note="Biotin-lipoyl like; Region: Biotin_lipoyl_2;
+ pfam13533"
+ /db_xref="CDD:205711"
+ misc_feature complement(1955734..1956036)
+ /locus_tag="SARI_02021"
+ /note="HlyD family secretion protein; Region: HlyD_3;
+ pfam13437"
+ /db_xref="CDD:222128"
+ gene 1956995..1957687
+ /locus_tag="SARI_02022"
+ CDS 1956995..1957687
+ /locus_tag="SARI_02022"
+ /inference="protein motif:HMMPfam:IPR007488"
+ /inference="similar to AA sequence:REFSEQ:YP_151082.1"
+ /note="'COG: COG2990 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571043.1"
+ /db_xref="GI:161503931"
+ /db_xref="InterPro:IPR007488"
+ /translation="MAVNIKRDFALDALCFHYQQMRQLLSREQQVSYLSQYGLNLAKF
+ ETKNGELFQLDLVSLVSLDKEGESTIVVRDAQLRILAEITFTLCRFNQKRTLFIGGLQ
+ GAANDVPHDVIQQATKACHGLFPKRIVMEALCQFAQALQAKQIIAVSNDAHVYRSWRY
+ MDKKTQMHADYDAFWESLGGERIKGNYYALPLTIARKSEAEIASKKRAEYRRRYALLD
+ SIVEQVPATFMR"
+ misc_feature <1956995..1957678
+ /locus_tag="SARI_02022"
+ /note="Protein of unknown function (DUF535); Region:
+ DUF535; pfam04393"
+ /db_xref="CDD:218060"
+ gene complement(1957684..1959342)
+ /locus_tag="SARI_02023"
+ CDS complement(1957684..1959342)
+ /locus_tag="SARI_02023"
+ /inference="similar to AA sequence:REFSEQ:YP_215881.1"
+ /note="'COG: COG3593 Predicted ATP-dependent endonuclease
+ of the OLD family;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571044.1"
+ /db_xref="GI:161503932"
+ /translation="MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTL
+ LLSPELDLYHFVREDFWFPPGDIKGREHHLHIILTFRETQPGRHRVRRYRALEACWSP
+ CQDHFHRIFYRLEGECSADGSVMTLRSFLNSDGQPLPVENINEQVRHLVRLMPVLRLR
+ DARFMRRIRNGTMPNVPDVEVTARQLDFLARELATRPQNLTDGQIRQGLSAMVQLLEH
+ YFSEQGAGQARHRLMRRRSQNEQRSWRYLDIINRMIDKPGSRSHRVILLGLFSTLLQA
+ KGTLRLHKDARPLLLVEDPETRLHPIMLSVAWQLLNLLPLQRIATTNSGELLSLTPVE
+ HVVRLVRESSRVAAWRLGPGGLSAEDGRRIAFHIRFNRASSLFARCWLLVEGETETWV
+ INELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATV
+ RSLLNNDREEEREHLTALPALDMEHFMYRQGFADVFYRVAQLPPNVSMNTRKIITKAI
+ HRSSKPDLAIEVAMEAGRRGIDAVPPLFRKMFSRVVWLARGRAD"
+ misc_feature complement(1957687..1959342)
+ /locus_tag="SARI_02023"
+ /note="Predicted ATP-dependent endonuclease of the OLD
+ family [DNA replication, recombination, and repair];
+ Region: COG3593"
+ /db_xref="CDD:226121"
+ misc_feature complement(1958218..1959342)
+ /locus_tag="SARI_02023"
+ /note="Protein of unknown function (DUF2813); Region:
+ DUF2813; pfam11398"
+ /db_xref="CDD:221106"
+ misc_feature complement(1957927..1958217)
+ /locus_tag="SARI_02023"
+ /note="TOPRIM_OLD: topoisomerase-primase (TOPRIM)
+ nucleotidyl transferase/hydrolase domain of the type found
+ in bacterial and archaeal nucleases of the OLD (overcome
+ lysogenization defect) family. The bacteriophage P2 OLD
+ protein, which has DNase as well as...; Region:
+ TOPRIM_OLD; cd01026"
+ /db_xref="CDD:173776"
+ misc_feature complement(order(1958023..1958025,1958029..1958031,
+ 1958176..1958178,1958185..1958190))
+ /locus_tag="SARI_02023"
+ /note="putative active site [active]"
+ /db_xref="CDD:173776"
+ misc_feature complement(order(1958029..1958031,1958188..1958190))
+ /locus_tag="SARI_02023"
+ /note="putative metal-binding site [ion binding]; other
+ site"
+ /db_xref="CDD:173776"
+ gene 1959543..1960442
+ /locus_tag="SARI_02024"
+ CDS 1959543..1960442
+ /locus_tag="SARI_02024"
+ /inference="protein motif:BlastProDom:IPR005642"
+ /inference="protein motif:HMMPfam:IPR005642"
+ /inference="protein motif:ScanRegExp:IPR000005"
+ /inference="similar to AA sequence:INSD:AAL19874.1"
+ /note="'COG: COG2431 Predicted membrane protein;
+ Psort location: endoplasmic reticulum, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571045.1"
+ /db_xref="GI:161503933"
+ /db_xref="InterPro:IPR000005"
+ /db_xref="InterPro:IPR005642"
+ /translation="MFSGLLIILVPLIVGYLIPLRHKAALQLINRLLSWIVYLILFFM
+ GISLAFLDNLASNLVAIFHYSAVSITIILLCNIAALFWLERTLPWRHHHQQEKLPSRI
+ AMALESLQLCGVVVLGFVVGLSGLSFLQHATEASEYTLIFLLFLVGIQLRNSGMTLKQ
+ IVLNRRGMIVAVVVVASSLLGGVINAFILDLPLKTALAMASGFGWYSLSGILLTESFG
+ PVIGSAAFFNDLARELLAIMLIPGLVRRSRSTALGLCGATSMDFTLPVLQRSGGVEIV
+ PAAIVHGFILSLLVPLLMAFFSA"
+ misc_feature 1959615..1960439
+ /locus_tag="SARI_02024"
+ /note="Predicted membrane protein [Function unknown];
+ Region: COG2431"
+ /db_xref="CDD:225287"
+ gene 1960586..1962238
+ /locus_tag="SARI_02025"
+ CDS 1960586..1962238
+ /locus_tag="SARI_02025"
+ /inference="protein motif:HMMPfam:IPR004137"
+ /inference="protein motif:HMMPIR:IPR010048"
+ /inference="protein motif:HMMTigr:IPR010048"
+ /inference="protein motif:superfamily:IPR011254"
+ /inference="similar to AA sequence:SwissProt:Q8Z829"
+ /note="catalyzes the reduction of hydroxylamine to ammonia
+ and water"
+ /codon_start=1
+ /transl_table=11
+ /product="hydroxylamine reductase"
+ /protein_id="YP_001571046.2"
+ /db_xref="GI:448236250"
+ /db_xref="InterPro:IPR004137"
+ /db_xref="InterPro:IPR010048"
+ /db_xref="InterPro:IPR011254"
+ /translation="MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQG
+ LSAWAAKAREYGIINHDVDNFAPRAFFSTLTNVNFDSPRIVGYASDAIAMREALKAQC
+ LSVDTNAHCDNPMAELQLISDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLK
+ GAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECAMEIGQMNFKVMSIL
+ DAGETSKYGHPTPTQVNVKATEGKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLP
+ AHGYPQLRKFRHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGSYDDRIWTRS
+ IVGWPGVSHLEGDDFGPVIAQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLIDLVS
+ REKLRHIFLVGGCDGARGERNYFTDFATSVPDDCLILTLACGKYRFNKLEFGDIEGLP
+ RLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVK
+ NIVTGPTAPGFFTPDLLAILNEKFGLRSITTVEEDMKQLLSA"
+ misc_feature 1960586..1962235
+ /locus_tag="SARI_02025"
+ /note="hybrid cluster protein; Provisional; Region:
+ PRK05290"
+ /db_xref="CDD:235391"
+ misc_feature 1960586..>1960849
+ /locus_tag="SARI_02025"
+ /note="The HCP family of iron-sulfur proteins includes
+ hybrid cluster protein (HCP), acetyl-CoA synthase (ACS),
+ and carbon monoxide dehydrogenase (CODH), all of which
+ contain [Fe4-S4] metal clusters at their active sites.
+ These proteins have a conserved...; Region: HCP_like;
+ cl14655"
+ /db_xref="CDD:246686"
+ misc_feature order(1960694..1960696,1960709..1960714,1960721..1960726)
+ /locus_tag="SARI_02025"
+ /note="ACS interaction site; other site"
+ /db_xref="CDD:238330"
+ misc_feature order(1960712..1960714,1960721..1960723,1960733..1960735,
+ 1960742..1960744)
+ /locus_tag="SARI_02025"
+ /note="CODH interaction site; other site"
+ /db_xref="CDD:238330"
+ misc_feature 1961072..1962229
+ /locus_tag="SARI_02025"
+ /note="Hybrid cluster protein (HCP), formerly known as
+ prismane, is thought to play a role in nitrogen metabolism
+ but its specific function is unknown. HCP has three
+ structural domains, an N-terminal alpha-helical domain,
+ and two similar domains comprising a...; Region: HCP;
+ cd01914"
+ /db_xref="CDD:238895"
+ misc_feature order(1961330..1961332,1961402..1961404,1961534..1961536,
+ 1961798..1961800,1961882..1961884,1961957..1961959,
+ 1962059..1962061)
+ /locus_tag="SARI_02025"
+ /note="hybrid metal cluster; other site"
+ /db_xref="CDD:238895"
+ gene 1962283..1963218
+ /locus_tag="SARI_02026"
+ CDS 1962283..1963218
+ /locus_tag="SARI_02026"
+ /inference="protein motif:FPrintScan:IPR000951"
+ /inference="protein motif:Gene3D:IPR012675"
+ /inference="protein motif:HMMPfam:IPR001041"
+ /inference="protein motif:HMMPfam:IPR001433"
+ /inference="protein motif:HMMPfam:IPR008333"
+ /inference="protein motif:superfamily:IPR001041"
+ /inference="similar to AA sequence:REFSEQ:YP_151086.1"
+ /note="'KEGG: spt:SPA1863 8.0e-162 hcr; NADH
+ oxidoreductase Hcr;
+ COG: COG1018 Flavodoxin reductases (ferredoxin-NADPH
+ reductases) family 1;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="HCP oxidoreductase, NADH-dependent"
+ /protein_id="YP_001571047.1"
+ /db_xref="GI:161503935"
+ /db_xref="InterPro:IPR000951"
+ /db_xref="InterPro:IPR001041"
+ /db_xref="InterPro:IPR001433"
+ /db_xref="InterPro:IPR008333"
+ /db_xref="InterPro:IPR012675"
+ /translation="MQVHHIHQETPDVWSIALICHDYYPYRAGQYALVSVRNSAQTLR
+ AYTLSSTPGVSEYITLTVRRIDDGAGSQWLTRDIKRGDYIWLSDAMGDFTCDDKIEDK
+ FLLLAAGCGVTPIMSMRRWLAKHRPQADVQVIFNIRSPEDVIFADEWRQYPVTLVAEN
+ HATEGFVAGRLTTELLQRVPDLASRTIMTCGPAPYMDFVEQQVKALGVTRFFKEKFFT
+ PVAETATSGLKFTKLQPAQEFYSPVGTTLLEALESNKVPVAAACRAGVCGCCKTKIVS
+ GDYTVSSTMTLSEAEIAEGYVLACSCHPQSDLVLA"
+ misc_feature 1962283..1963215
+ /locus_tag="SARI_02026"
+ /note="HCP oxidoreductase, NADH-dependent; Provisional;
+ Region: PRK10684"
+ /db_xref="CDD:236735"
+ misc_feature 1962283..1962930
+ /locus_tag="SARI_02026"
+ /note="Iron-sulfur binding ferredoxin reductase (FNR)
+ proteins combine the FAD and NAD(P) binding regions of FNR
+ with an iron-sulfur binding cluster domain.
+ Ferredoxin-NADP+ (oxido)reductase is an FAD-containing
+ enzyme that catalyzes the reversible electron...; Region:
+ FNR_iron_sulfur_binding_1; cd06215"
+ /db_xref="CDD:99811"
+ misc_feature order(1962373..1962375,1962412..1962423,1962463..1962471,
+ 1962475..1962477,1962487..1962495,1962610..1962612,
+ 1962619..1962621,1962922..1962924,1962928..1962930)
+ /locus_tag="SARI_02026"
+ /note="FAD binding pocket [chemical binding]; other site"
+ /db_xref="CDD:99811"
+ misc_feature order(1962412..1962414,1962418..1962423)
+ /locus_tag="SARI_02026"
+ /note="FAD binding motif [chemical binding]; other site"
+ /db_xref="CDD:99811"
+ misc_feature order(1962484..1962486,1962493..1962495,1962502..1962504,
+ 1962523..1962525,1962547..1962549,1962553..1962555)
+ /locus_tag="SARI_02026"
+ /note="phosphate binding motif [ion binding]; other site"
+ /db_xref="CDD:99811"
+ misc_feature order(1962595..1962597,1962607..1962618,1962622..1962624)
+ /locus_tag="SARI_02026"
+ /note="beta-alpha-beta structure motif; other site"
+ /db_xref="CDD:99811"
+ misc_feature order(1962610..1962615,1962688..1962696,1962853..1962858)
+ /locus_tag="SARI_02026"
+ /note="NAD binding pocket [chemical binding]; other site"
+ /db_xref="CDD:99811"
+ misc_feature 1962991..1963212
+ /locus_tag="SARI_02026"
+ /note="2Fe-2S iron-sulfur cluster binding domain.
+ Iron-sulfur proteins play an important role in electron
+ transfer processes and in various enzymatic reactions. The
+ family includes plant and algal ferredoxins, which act as
+ electron carriers in photosynthesis...; Region: fer2;
+ cd00207"
+ /db_xref="CDD:238126"
+ misc_feature order(1963054..1963059,1963066..1963068,1963075..1963077,
+ 1963081..1963092,1963177..1963182)
+ /locus_tag="SARI_02026"
+ /note="catalytic loop [active]"
+ /db_xref="CDD:238126"
+ misc_feature order(1963066..1963068,1963081..1963083,1963090..1963092,
+ 1963180..1963182)
+ /locus_tag="SARI_02026"
+ /note="iron binding site [ion binding]; other site"
+ /db_xref="CDD:238126"
+ gene 1963338..1965056
+ /locus_tag="SARI_02027"
+ CDS 1963338..1965056
+ /locus_tag="SARI_02027"
+ /inference="protein motif:HMMPfam:IPR011766"
+ /inference="protein motif:HMMPfam:IPR012000"
+ /inference="protein motif:HMMPfam:IPR012001"
+ /inference="protein motif:HMMPIR:IPR000399"
+ /inference="protein motif:HMMPIR:IPR012217"
+ /inference="similar to AA sequence:INSD:AAL19871.1"
+ /note="catalyzes the formation of acetate from pyruvate"
+ /codon_start=1
+ /transl_table=11
+ /product="pyruvate dehydrogenase"
+ /protein_id="YP_001571048.1"
+ /db_xref="GI:161503936"
+ /db_xref="InterPro:IPR000399"
+ /db_xref="InterPro:IPR011766"
+ /db_xref="InterPro:IPR012000"
+ /db_xref="InterPro:IPR012001"
+ /db_xref="InterPro:IPR012217"
+ /translation="MKQTVAAFIAKTLEQAGVKRIWGVTGDSLNGLSDSLNRMGSIEW
+ MPTRHEEVAAFAAGAEAQLTGELAVCAGSCGPGNLHLINGLFDCHRNHVPVLAIAAHI
+ PSSEIGSGYFQETHPQELFRECSHYCELVSSPEQIPQVLTIAMRKAVLNRGVSVVVLP
+ GDVALKPAPENAVTHWYHAPLPVVTPAEEELKKLAQLLRYSSNIALMCGSGCAGAHEE
+ LVAFAAKLKAPIVHALRGKEHIEYDNPYDVGMTGLIGFSSGFHTMMNADTLILLGTQF
+ PYRAFYPSDAKIIQIDINPGSIGAHSKVDMALVGDIKATLRAMLPLVEEKSDRKFLDK
+ ALEHYRDARKGLDDLAKLSDKAIHPQYLAQQISHFAADDAIFTCDVGTPTVWAARYLK
+ MNGKRRLLGSFNHGSMANAMPQALGAQATALGRQVIAMCGDGGFSMLMGDFLSVVQMK
+ LPVKIVVFNNSVLGFVAMEMKAGGYLTNGTELHDTNFARIAEACGITGIRVEKAADVD
+ SALQRAFSINGPVLVDVVVAKEELAIPPQIKLEQAKGFSLYMLRAIISGRGDEVIELA
+ KTNWLR"
+ misc_feature 1963338..1965053
+ /locus_tag="SARI_02027"
+ /note="pyruvate dehydrogenase; Provisional; Region:
+ PRK09124"
+ /db_xref="CDD:181661"
+ misc_feature 1963347..1963838
+ /locus_tag="SARI_02027"
+ /note="Pyrimidine (PYR) binding domain of POX; Region:
+ TPP_PYR_POX; cd07039"
+ /db_xref="CDD:132922"
+ misc_feature order(1963395..1963397,1963410..1963412,1963416..1963418,
+ 1963425..1963427,1963434..1963439,1963473..1963484,
+ 1963491..1963493,1963503..1963505,1963512..1963517,
+ 1963521..1963526,1963563..1963565,1963572..1963574,
+ 1963584..1963586,1963593..1963598,1963605..1963610,
+ 1963830..1963832)
+ /locus_tag="SARI_02027"
+ /note="PYR/PP interface [polypeptide binding]; other site"
+ /db_xref="CDD:132922"
+ misc_feature order(1963410..1963412,1963416..1963418,1963425..1963427,
+ 1963434..1963439,1963473..1963484,1963488..1963490,
+ 1963563..1963565,1963572..1963577,1963584..1963586,
+ 1963593..1963595,1963695..1963697,1963830..1963832)
+ /locus_tag="SARI_02027"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:132922"
+ misc_feature order(1963410..1963412,1963416..1963418,1963425..1963427,
+ 1963434..1963439,1963473..1963484,1963488..1963490,
+ 1963563..1963565,1963572..1963577,1963584..1963586,
+ 1963593..1963595,1963683..1963685,1963689..1963691,
+ 1963695..1963697,1963719..1963721,1963764..1963766,
+ 1963773..1963775,1963830..1963832)
+ /locus_tag="SARI_02027"
+ /note="tetramer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:132922"
+ misc_feature order(1963410..1963412,1963485..1963487,1963554..1963556,
+ 1963575..1963577)
+ /locus_tag="SARI_02027"
+ /note="TPP binding site [chemical binding]; other site"
+ /db_xref="CDD:132922"
+ misc_feature 1963938..1964294
+ /locus_tag="SARI_02027"
+ /note="Thiamine pyrophosphate enzyme, central domain;
+ Region: TPP_enzyme_M; pfam00205"
+ /db_xref="CDD:215786"
+ misc_feature 1964406..1964936
+ /locus_tag="SARI_02027"
+ /note="Thiamine pyrophosphate (TPP) family, Pyruvate
+ oxidase (POX) subfamily, TPP-binding module; composed of
+ proteins similar to Lactobacillus plantarum POX, which
+ plays a key role in controlling acetate production under
+ aerobic conditions. POX decarboxylates...; Region:
+ TPP_POX; cd02014"
+ /db_xref="CDD:238972"
+ misc_feature order(1964481..1964483,1964553..1964555,1964559..1964561,
+ 1964634..1964642,1964715..1964717,1964721..1964723,
+ 1964727..1964732)
+ /locus_tag="SARI_02027"
+ /note="TPP-binding site [chemical binding]; other site"
+ /db_xref="CDD:238972"
+ gene 1965140..1966096
+ /locus_tag="SARI_02028"
+ CDS 1965140..1966096
+ /locus_tag="SARI_02028"
+ /inference="protein motif:HMMPfam:IPR001597"
+ /inference="similar to AA sequence:REFSEQ:YP_151088.1"
+ /note="'low- specificity; catalyzes the formation of
+ acetaldehyde and glycine from L-threonine; acts on
+ L-threonine, L-allo-threonine, L-threo-phenylserine, and
+ L-erythro-phenylserine'"
+ /codon_start=1
+ /transl_table=11
+ /product="L-threonine aldolase"
+ /protein_id="YP_001571049.1"
+ /db_xref="GI:161503937"
+ /db_xref="InterPro:IPR001597"
+ /translation="MLEAMMAAPVGDDVYGDDPTVNALQHYAAALSGKEAALFLPTGT
+ QANLVALLSHCERGEEYIVGQGAHNYLYEAGGAAVLGSIQPQPIDAAADGTLPLENVA
+ AKIKADDIHFARTRLLSLENTHNGKVLPRAYLKDAWAFTRERGLALHVDGARIFNAVV
+ AYGCELKEVTQYCDSFTICLSKGLGTPVGSLLVGNRDYIKRATRWRKMVGGGMRQAGI
+ LAAAGLYALEHNVARLQEDHDNAAWLAQQLREAGAEVMRHETNMLFVRVGEGQAAALG
+ DYLRERNILINAAPIVRLVTHLDVSRQQLADVIAHWRAFLAR"
+ misc_feature 1965140..1966090
+ /locus_tag="SARI_02028"
+ /note="Threonine aldolase [Amino acid transport and
+ metabolism]; Region: GLY1; COG2008"
+ /db_xref="CDD:224919"
+ misc_feature 1965140..1966084
+ /locus_tag="SARI_02028"
+ /note="Low-specificity threonine aldolase (TA). This
+ family belongs to pyridoxal phosphate (PLP)-dependent
+ aspartate aminotransferase superfamily (fold I). TA
+ catalyzes the conversion of L-threonine or
+ L-allo-threonine to glycine and acetaldehyde in a...;
+ Region: TA_like; cd06502"
+ /db_xref="CDD:99748"
+ misc_feature order(1965143..1965145,1965152..1965160,1965260..1965262,
+ 1965269..1965274,1965293..1965295,1965347..1965370,
+ 1965389..1965397,1965680..1965685,1965701..1965703,
+ 1965746..1965751,1965758..1965763,1965791..1965796,
+ 1965998..1966000)
+ /locus_tag="SARI_02028"
+ /note="tetramer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99748"
+ misc_feature order(1965266..1965271,1965278..1965280,1965500..1965502,
+ 1965590..1965592,1965599..1965601,1965674..1965676,
+ 1965683..1965685)
+ /locus_tag="SARI_02028"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:99748"
+ misc_feature 1965683..1965685
+ /locus_tag="SARI_02028"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:99748"
+ gene 1966107..1967540
+ /locus_tag="SARI_02029"
+ CDS 1966107..1967540
+ /locus_tag="SARI_02029"
+ /inference="protein motif:HMMPfam:IPR001509"
+ /inference="similar to AA sequence:REFSEQ:NP_459910.1"
+ /note="'KEGG: eci:UTI89_C0872 4.5e-216 ybjT; hypothetical
+ protein YbjT K00329:K00356;
+ COG: COG0702 Predicted nucleoside-diphosphate-sugar
+ epimerases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571050.1"
+ /db_xref="GI:161503938"
+ /db_xref="InterPro:IPR001509"
+ /translation="MPQRILVLGASGYIGQHLVFALSQQGYQVRAAARCIERLEKQRL
+ ANVSCHQVDLHWPENLPALLRDIDTVYYLVHGMGEGGDFIAHERQAALNVRDALRQTP
+ VNQLIFLSSLQAPEHEQSDHLRARQLTADTLRDAGVPVTELRAGIIVGAGSAAFEVMR
+ DMVYNLPILTPPRWVRSRTTPIALDNLLYYLVGLLDHPTREHRILEAAGPQVLSYQQQ
+ FERFMAVSGKRRPLIPIPFPTRWISVWFLNVITSVPPTIAKALIQGLRHDLLADDAAL
+ KTLLPQTLITFDDAVRRTLKEEEKLVNSSDWGYDALAFARWRPEYGYFPKQAGFIAQT
+ PASLSALWQVVNRLGGKEGYFFGNILWETRAAMDRLVGHKLAKGRPPHALLKPGDTVD
+ SWKVIIVEPEKQLTLLFGMKAPGLGRLSFTLRDKGRYREIDVRAWWHPHGMPGLIYWL
+ LMIPAHLFIFRGMAKRIARLAEQITEK"
+ misc_feature 1966116..1966907
+ /locus_tag="SARI_02029"
+ /note="Predicted nucleoside-diphosphate-sugar epimerases
+ [Cell envelope biogenesis, outer membrane / Carbohydrate
+ transport and metabolism]; Region: COG0702"
+ /db_xref="CDD:223774"
+ misc_feature 1966119..1966994
+ /locus_tag="SARI_02029"
+ /note="atypical (a) SDRs, subgroup 2; Region: SDR_a2;
+ cd05245"
+ /db_xref="CDD:187556"
+ misc_feature order(1966131..1966133,1966137..1966142,1966146..1966148,
+ 1966203..1966211,1966323..1966331,1966431..1966439,
+ 1966470..1966472,1966482..1966484,1966539..1966550)
+ /locus_tag="SARI_02029"
+ /note="putative NAD(P) binding site [chemical binding];
+ other site"
+ /db_xref="CDD:187556"
+ misc_feature order(1966470..1966472,1966482..1966484)
+ /locus_tag="SARI_02029"
+ /note="putative active site [active]"
+ /db_xref="CDD:187556"
+ misc_feature <1967184..1967495
+ /locus_tag="SARI_02029"
+ /note="Protein of unknown function (DUF2867); Region:
+ DUF2867; pfam11066"
+ /db_xref="CDD:220962"
+ gene 1967636..1968649
+ /locus_tag="SARI_02030"
+ CDS 1967636..1968649
+ /locus_tag="SARI_02030"
+ /inference="protein motif:HMMPfam:IPR001509"
+ /inference="similar to AA sequence:INSD:CAD05334.1"
+ /note="'KEGG: eci:UTI89_C0871 1.8e-171 ybjS; hypothetical
+ protein YbjS K00067;
+ COG: COG0451 Nucleoside-diphosphate-sugar epimerases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571051.1"
+ /db_xref="GI:161503939"
+ /db_xref="InterPro:IPR001509"
+ /translation="MKVLVTGATSGLGRNAVEFLRNKGISVRATGRNEAMGKLLEKMG
+ AEFVHADLTELVSSQAKVMLAGIDTLWHCSSFTSPWGTQQAFDLANVRATRRLGEWAV
+ AWGVRNFIHISSPSLYFDYHHHRDIKEDFRPHRFANEFARSKAAGEEVINMLAQANPQ
+ TRFTVLRPQSLFGQHDKVFIPRLAHMMHHYGSVLLPHGGSAMVDMTYYENAIHAMWLA
+ SQPVCDHLPSGRAYNITNGENRTLRSIVQKLIDELAIDCRIRSVPYPMLDMIARSMER
+ FGKKSAKEPPLTHYGVSKLNFDFTLDTTRAQDELGYQPIVTLDEGIERTAAWLRDHGN
+ LPR"
+ misc_feature 1967636..1968640
+ /locus_tag="SARI_02030"
+ /note="Nucleoside-diphosphate-sugar epimerases [Cell
+ envelope biogenesis, outer membrane / Carbohydrate
+ transport and metabolism]; Region: WcaG; COG0451"
+ /db_xref="CDD:223528"
+ misc_feature 1967642..1968622
+ /locus_tag="SARI_02030"
+ /note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
+ NADB_Rossmann; cl09931"
+ /db_xref="CDD:245206"
+ misc_feature order(1967654..1967656,1967660..1967665,1967669..1967671,
+ 1967726..1967734,1967852..1967860,1967969..1967977,
+ 1968053..1968055,1968065..1968067,1968137..1968148)
+ /locus_tag="SARI_02030"
+ /note="NAD(P) binding site [chemical binding]; other site"
+ /db_xref="CDD:187535"
+ misc_feature order(1967903..1967905,1967975..1967977,1968053..1968055,
+ 1968065..1968067)
+ /locus_tag="SARI_02030"
+ /note="active site"
+ /db_xref="CDD:187535"
+ gene complement(1968646..1969476)
+ /locus_tag="SARI_02031"
+ CDS complement(1968646..1969476)
+ /locus_tag="SARI_02031"
+ /inference="protein motif:HMMPfam:IPR002502"
+ /inference="protein motif:HMMSmart:IPR002502"
+ /inference="protein motif:superfamily:IPR009070"
+ /inference="similar to AA sequence:INSD:CAD05333.1"
+ /note="'KEGG: sty:STY0927 6.3e-146 putative
+ N-acetylmuramoyl-L-alanine amidase K01446;
+ COG: COG3023 Negative regulator of beta-lactamase
+ expression;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571052.1"
+ /db_xref="GI:161503940"
+ /db_xref="InterPro:IPR002502"
+ /db_xref="InterPro:IPR009070"
+ /translation="MRALLWLVGLALLLTGCASEKGIIDKDGYQLDSRHRAQAAYPRI
+ KVLVIHYTAENFDVSLATLTGRNVSSHYLIPAIPPLYGGKPRIWQLVPEQDQAWHAGV
+ SFWRGATRLNDTSIGIELENRGWRMSGGVKSFAPFESAQIQALIPLAKDIIARYDIKP
+ QNVVAHADIAPQRKDDPGPRFPWRELAAQGIGAWPDAQRVAFYLAGRAPYTPVDTATV
+ LALLSRYGYEVKADMTAREQQRVIMAFQMHFRPAQWNGIADAETQAIVKALLEKYGQD
+ "
+ misc_feature complement(1968661..1969434)
+ /locus_tag="SARI_02031"
+ /note="N-acetyl-anhydromuramyl-L-alanine amidase [Cell
+ envelope biogenesis, outer membrane]; Region: ampD;
+ COG3023"
+ /db_xref="CDD:225567"
+ misc_feature complement(1968937..1969350)
+ /locus_tag="SARI_02031"
+ /note="Peptidoglycan recognition proteins (PGRPs) are
+ pattern recognition receptors that bind, and in certain
+ cases, hydrolyze peptidoglycans (PGNs) of bacterial cell
+ walls. PGRPs have been divided into three classes: short
+ PGRPs (PGRP-S), that are small (20...; Region: PGRP;
+ cd06583"
+ /db_xref="CDD:133475"
+ misc_feature complement(order(1968949..1968951,1968955..1968957,
+ 1968979..1968981,1969267..1969269,1969327..1969329))
+ /locus_tag="SARI_02031"
+ /note="amidase catalytic site [active]"
+ /db_xref="CDD:133475"
+ misc_feature complement(order(1968949..1968951,1968979..1968981,
+ 1969327..1969329))
+ /locus_tag="SARI_02031"
+ /note="Zn binding residues [ion binding]; other site"
+ /db_xref="CDD:133475"
+ misc_feature complement(order(1968949..1968957,1968967..1968969,
+ 1968979..1968981,1969141..1969143,1969180..1969185,
+ 1969204..1969206,1969267..1969269,1969279..1969281,
+ 1969321..1969326))
+ /locus_tag="SARI_02031"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:133475"
+ gene complement(1969473..1969796)
+ /locus_tag="SARI_02032"
+ CDS complement(1969473..1969796)
+ /locus_tag="SARI_02032"
+ /inference="protein motif:HMMPfam:IPR002765"
+ /inference="similar to AA sequence:INSD:CAD05332.1"
+ /note="'COG: COG0393 Uncharacterized conserved protein;
+ Psort location: cytoskeletal, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571053.1"
+ /db_xref="GI:161503941"
+ /db_xref="InterPro:IPR002765"
+ /translation="MQFSTTPTLEGQSIVEYCGVVTGEAILGANIFRDFFAGIRDIVG
+ GRSGAYEKELRKAREIAFQELGEQAKALGADAVVGIDIDYETVGKDGSMLMVSVSGTA
+ VKTRR"
+ misc_feature complement(1969479..1969796)
+ /locus_tag="SARI_02032"
+ /note="hypothetical protein; Provisional; Region:
+ PRK02877"
+ /db_xref="CDD:179490"
+ gene complement(1970402..1971004)
+ /locus_tag="SARI_02033"
+ CDS complement(1970402..1971004)
+ /locus_tag="SARI_02033"
+ /inference="protein motif:ScanRegExp:IPR006025"
+ /inference="similar to AA sequence:INSD:AAS47020.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571054.1"
+ /db_xref="GI:161503942"
+ /db_xref="InterPro:IPR006025"
+ /translation="MRWIKNNQQLSFHGTDHKIYQQLEAALDKIESTDTGRILLKCIE
+ LTSQLKSEKLAIHLNCAELGVVAHCNTDAENARGTGSDFHCNLNAVAYPCGQGISLVD
+ FHACIVFHELLHVLHNLNGERLKVESSQPESQTHYPFLLEEARTVGLGSFSEEVLSEN
+ KFREEIGVPRRTFYPRDPYLIHDDNTVTQGLQRKKLHPLL"
+ gene complement(1971531..1971857)
+ /locus_tag="SARI_02034"
+ CDS complement(1971531..1971857)
+ /locus_tag="SARI_02034"
+ /inference="protein motif:HMMPfam:IPR001584"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:REFSEQ:YP_405838.1"
+ /note="'COG: COG2801 Transposase and inactivated
+ derivatives;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571055.1"
+ /db_xref="GI:161503943"
+ /db_xref="InterPro:IPR001584"
+ /db_xref="InterPro:IPR012337"
+ /translation="MATLRGFRTGRWLAGRLMKEPGLVSCQQPAHRYKRGGHEHIAIP
+ NHPERQFAVTETNQVWCGNVTYIWTGKRWAYLAVVLDLFARKPVGRAMLFSLDSRLTI
+ KALEMA"
+ misc_feature complement(<1971534..1971689)
+ /locus_tag="SARI_02034"
+ /note="Integrase core domain; Region: rve; pfam00665"
+ /db_xref="CDD:216050"
+ unsure 1971706..1971777
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(1972101..1972352)
+ /locus_tag="SARI_02035"
+ CDS complement(1972101..1972352)
+ /locus_tag="SARI_02035"
+ /inference="protein motif:HMMPfam:IPR002514"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:INSD:ABB64371.1"
+ /note="'COG: COG2963 Transposase and inactivated
+ derivatives;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571056.1"
+ /db_xref="GI:161503944"
+ /db_xref="InterPro:IPR002514"
+ /db_xref="InterPro:IPR009057"
+ /translation="MKKRNFSAEFKRESAQLVVDQNYTVADAAKAMDAGLSTMTRWVK
+ QLRDARQGKTPEASPITPEQIEIRELRKNYNVLKWITKY"
+ misc_feature complement(<1972134..1972352)
+ /locus_tag="SARI_02035"
+ /note="Transposase and inactivated derivatives [DNA
+ replication, recombination, and repair]; Region: COG2963"
+ /db_xref="CDD:225511"
+ misc_feature complement(1972137..1972349)
+ /locus_tag="SARI_02035"
+ /note="Transposase; Region: HTH_Tnp_1; cl17663"
+ /db_xref="CDD:248217"
+ gene 1972434..1972688
+ /locus_tag="SARI_02036"
+ CDS 1972434..1972688
+ /locus_tag="SARI_02036"
+ /inference="protein motif:Gene3D:IPR013762"
+ /inference="protein motif:superfamily:IPR011010"
+ /inference="similar to AA sequence:INSD:AAL19828.1"
+ /note="'COG: COG0582 Integrase;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571057.1"
+ /db_xref="GI:161503945"
+ /db_xref="InterPro:IPR011010"
+ /db_xref="InterPro:IPR013762"
+ /translation="MRRADLRYRKAYQFRHTYACWSLAAGANPNFIAAQMGHANAQMV
+ YTIYGAWMFDNNQSQVDILNQRLAATAPRVPQTGLVENLI"
+ misc_feature <1972434..1972589
+ /locus_tag="SARI_02036"
+ /note="DNA breaking-rejoining enzymes, C-terminal
+ catalytic domain. The DNA breaking-rejoining enzyme
+ superfamily includes type IB topoisomerases and tyrosine
+ recombinases that share the same fold in their catalytic
+ domain containing six conserved active site...; Region:
+ DNA_BRE_C; cl00213"
+ /db_xref="CDD:241691"
+ misc_feature order(1972461..1972469,1972575..1972577)
+ /locus_tag="SARI_02036"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:238231"
+ misc_feature order(1972467..1972469,1972476..1972478,1972545..1972547,
+ 1972575..1972577)
+ /locus_tag="SARI_02036"
+ /note="active site"
+ /db_xref="CDD:238231"
+ misc_feature order(1972467..1972469,1972476..1972478,1972545..1972547,
+ 1972575..1972577)
+ /locus_tag="SARI_02036"
+ /note="Int/Topo IB signature motif; other site"
+ /db_xref="CDD:238231"
+ gene 1972784..1973299
+ /locus_tag="SARI_02038"
+ CDS 1972784..1973299
+ /locus_tag="SARI_02038"
+ /note="'COG: NOG08103 non supervised orthologous group;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="lipoprotein"
+ /protein_id="YP_001571059.2"
+ /db_xref="GI:448236251"
+ /translation="MRYSKLSLLIPCSLLLNACTTVTPAYKDNGPRIGACVEGGPDRV
+ AQQFYDYRLQNRSNDIAALRPFLSDNLAKLLTDASRDTEHRQLMSSDPFSSRATLPDS
+ ANVASASTIPNRDARNIPLRVALKQGDQNWQDEVLMIHEGPCWAIDDVRYLGGNVHAP
+ AGTLRQSIENH"
+ misc_feature 1972784..1973296
+ /locus_tag="SARI_02038"
+ /note="putative lipoprotein; Provisional; Region:
+ PRK10533"
+ /db_xref="CDD:182526"
+ gene 1973527..1974255
+ /gene="artP"
+ /locus_tag="SARI_02039"
+ CDS 1973527..1974255
+ /gene="artP"
+ /locus_tag="SARI_02039"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:REFSEQ:YP_215870.1"
+ /note="With ArtMQJI transports arginine across the inner
+ membrane"
+ /codon_start=1
+ /transl_table=11
+ /product="arginine transporter ATP-binding subunit"
+ /protein_id="YP_001571060.1"
+ /db_xref="GI:161503948"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MSIQLNGINCFYGAHQALFDITLDCPEGETLVLLGPSGAGKSSL
+ LRVLNLLEMPRSGTLTIAGNHFDFTKTPTDKAIRELRQNVGMVFQQYNLWPHLTVVQN
+ LIEAPCRVLGLTKDQALARAEKLLERLRLKPYSDRYPLHLSGGQQQRVAIARALMMEP
+ QVLLFDEPTAALDPEITAQIVSIIHELAETNITQVIVTHEVEVARKTASRVIYMENGH
+ IVEHGDAGCFAHPQTEAFKNYLSH"
+ misc_feature 1973527..1974252
+ /gene="artP"
+ /locus_tag="SARI_02039"
+ /note="arginine transporter ATP-binding subunit;
+ Provisional; Region: artP; PRK11124"
+ /db_xref="CDD:182980"
+ misc_feature 1973533..1974183
+ /gene="artP"
+ /locus_tag="SARI_02039"
+ /note="ATP-binding cassette transporter nucleotide-binding
+ domain; Region: ABC_ATPase; cl17201"
+ /db_xref="CDD:247755"
+ misc_feature 1973629..1973652
+ /gene="artP"
+ /locus_tag="SARI_02039"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature order(1973638..1973643,1973647..1973655,1973791..1973793,
+ 1974022..1974027,1974121..1974123)
+ /gene="artP"
+ /locus_tag="SARI_02039"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213179"
+ misc_feature 1973782..1973793
+ /gene="artP"
+ /locus_tag="SARI_02039"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213179"
+ misc_feature 1973950..1973979
+ /gene="artP"
+ /locus_tag="SARI_02039"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213179"
+ misc_feature 1974010..1974027
+ /gene="artP"
+ /locus_tag="SARI_02039"
+ /note="Walker B; other site"
+ /db_xref="CDD:213179"
+ misc_feature 1974034..1974045
+ /gene="artP"
+ /locus_tag="SARI_02039"
+ /note="D-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature 1974109..1974129
+ /gene="artP"
+ /locus_tag="SARI_02039"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213179"
+ gene 1974314..1974999
+ /locus_tag="SARI_02040"
+ /note="Pseudogene compared to gi|16764251|ref|NP_459866.1|
+ arginine transport system [Salmonella typhimurium LT2]"
+ gene 1975009..1975725
+ /locus_tag="SARI_02041"
+ CDS 1975009..1975725
+ /locus_tag="SARI_02041"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="protein motif:HMMTigr:IPR010065"
+ /inference="similar to AA sequence:INSD:AAX64787.1"
+ /note="with ArtPMJI transports arginine across the inner
+ membrane"
+ /codon_start=1
+ /transl_table=11
+ /product="arginine transporter permease subunit ArtQ"
+ /protein_id="YP_001571061.1"
+ /db_xref="GI:161503949"
+ /db_xref="InterPro:IPR000515"
+ /db_xref="InterPro:IPR010065"
+ /translation="MNEFFPLVSAAGITVGLAVCALIIGLALAMFFAVWESIKWRPIA
+ WIGSALVTILRGLPEILVVLFIYFGSSQLLLTLSDGVTLNLGFAQIPVQMEIENFDVS
+ PFLCGVVALSLLYAAYASQTLRGALKAIPSGQWESGQALGLSKTAIFFRLVMPQMWRH
+ ALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQDPFNWYILAAAIYLVITLI
+ SQYILKRIDLRATRFERRPD"
+ misc_feature 1975009..1975719
+ /locus_tag="SARI_02041"
+ /note="ABC-type arginine transport system, permease
+ component [Amino acid transport and metabolism]; Region:
+ ArtQ; COG4215"
+ /db_xref="CDD:226670"
+ misc_feature 1975039..1975665
+ /locus_tag="SARI_02041"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature order(1975087..1975092,1975099..1975104,1975117..1975119,
+ 1975147..1975158,1975162..1975191,1975198..1975203,
+ 1975207..1975209,1975345..1975350,1975354..1975356,
+ 1975360..1975362,1975369..1975374,1975378..1975380,
+ 1975390..1975395,1975402..1975404,1975453..1975455,
+ 1975495..1975500,1975507..1975509,1975528..1975539,
+ 1975546..1975551,1975588..1975593,1975621..1975626,
+ 1975633..1975638,1975642..1975647,1975654..1975659)
+ /locus_tag="SARI_02041"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(1975165..1975209,1975528..1975545)
+ /locus_tag="SARI_02041"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(1975207..1975209,1975330..1975332,1975546..1975548,
+ 1975582..1975584,1975591..1975593,1975621..1975623)
+ /locus_tag="SARI_02041"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(1975405..1975443,1975459..1975464,1975474..1975476)
+ /locus_tag="SARI_02041"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene 1975725..1976393
+ /gene="artM"
+ /locus_tag="SARI_02042"
+ CDS 1975725..1976393
+ /gene="artM"
+ /locus_tag="SARI_02042"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="protein motif:HMMTigr:IPR010065"
+ /inference="similar to AA sequence:INSD:CAD05327.1"
+ /note="with ArtPQJI acts to transport arginine across the
+ inner membrane"
+ /codon_start=1
+ /transl_table=11
+ /product="arginine transporter permease subunit ArtM"
+ /protein_id="YP_001571062.1"
+ /db_xref="GI:161503950"
+ /db_xref="InterPro:IPR000515"
+ /db_xref="InterPro:IPR010065"
+ /translation="MLEYLPELLKGLHTSLTLTVASIAVALVLALVFTIILTLKTPFM
+ VWLVRGYITLFTGTPLLVQIFLIYYGPGQFPTLQEYPLLWHLLSEPWLCALIALSLNS
+ AAYTTQLFYGAIRAIPEGQWQSCGALGMSKKDTLAILLPYAFKRALSSYSNEVVLVFK
+ STSLAYTITLMEVMGYSQLLYGRTYDVMVFGAAGVIYLVVNGLLTLMMRLIERKALAF
+ ERRN"
+ misc_feature 1975860..1976342
+ /gene="artM"
+ /locus_tag="SARI_02042"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature order(1975866..1975877,1975881..1975910,1975917..1975922,
+ 1975926..1975928,1976022..1976027,1976031..1976033,
+ 1976037..1976039,1976046..1976051,1976055..1976057,
+ 1976067..1976072,1976079..1976081,1976130..1976132,
+ 1976169..1976174,1976181..1976183,1976202..1976213,
+ 1976220..1976225,1976262..1976267,1976292..1976297,
+ 1976304..1976309,1976313..1976318,1976325..1976330,
+ 1976337..1976342)
+ /gene="artM"
+ /locus_tag="SARI_02042"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(1975884..1975928,1976202..1976219)
+ /gene="artM"
+ /locus_tag="SARI_02042"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(1975926..1975928,1976007..1976009,1976220..1976222,
+ 1976256..1976258,1976265..1976267,1976292..1976294)
+ /gene="artM"
+ /locus_tag="SARI_02042"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(1976082..1976120,1976133..1976138,1976148..1976150)
+ /gene="artM"
+ /locus_tag="SARI_02042"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene 1976630..1977361
+ /locus_tag="SARI_02043"
+ CDS 1976630..1977361
+ /locus_tag="SARI_02043"
+ /inference="protein motif:HMMPfam:IPR001638"
+ /inference="protein motif:HMMSmart:IPR001638"
+ /inference="protein motif:HMMTigr:IPR005768"
+ /inference="protein motif:ScanRegExp:IPR001638"
+ /inference="similar to AA sequence:REFSEQ:YP_215866.1"
+ /note="'KEGG: eci:UTI89_C2121 9.0e-28 fliY;
+ cystine-binding periplasmic protein precursor
+ K02030:K02424;
+ COG: COG0834 ABC-type amino acid transport/signal
+ transduction systems, periplasmic component/domain;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571063.1"
+ /db_xref="GI:161503951"
+ /db_xref="InterPro:IPR001638"
+ /db_xref="InterPro:IPR005768"
+ /translation="MKKLVLAALLASFATGSIAAEKINFGVSATYPPFESLDASNKIV
+ GFDIDLATALCKQMQAECTFTNHAFDSLIPALKFRKYDAVISGMDITPERSKQVAFSN
+ PYYANSALVIAKKDTYKTFADLKGKRIGMENGTTHQKYLQDKHPEVKTVAYDSYQNAI
+ IDLKNGRIDGVFGDTAVVNEWLKTNPQLGPATEKVTDPQYFGTGLGIAVRPDNKALLE
+ KLNNALTAIKADGTYQKISDQWFPQ"
+ misc_feature 1976630..1977352
+ /locus_tag="SARI_02043"
+ /note="putative ABC transporter arginine-biding protein;
+ Provisional; Region: PRK15007"
+ /db_xref="CDD:184969"
+ misc_feature 1976696..1977352
+ /locus_tag="SARI_02043"
+ /note="Bacterial periplasmic transport systems use
+ membrane-bound complexes and substrate-bound,
+ membrane-associated, periplasmic binding proteins (PBPs)
+ to transport a wide variety of substrates, such as, amino
+ acids, peptides, sugars, vitamins and inorganic...;
+ Region: PBPb; cd00134"
+ /db_xref="CDD:238078"
+ misc_feature order(1976720..1976722,1976834..1976836,1976909..1976911,
+ 1977035..1977037,1977149..1977151)
+ /locus_tag="SARI_02043"
+ /note="substrate binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:238078"
+ misc_feature order(1977098..1977100,1977110..1977112,1977128..1977130)
+ /locus_tag="SARI_02043"
+ /note="membrane-bound complex binding site; other site"
+ /db_xref="CDD:238078"
+ misc_feature 1977230..1977247
+ /locus_tag="SARI_02043"
+ /note="hinge residues; other site"
+ /db_xref="CDD:238078"
+ gene complement(1977581..1979068)
+ /locus_tag="SARI_02044"
+ CDS complement(1977581..1979068)
+ /locus_tag="SARI_02044"
+ /inference="protein motif:HMMPfam:IPR000917"
+ /inference="similar to AA sequence:INSD:AAL19821.1"
+ /note="'KEGG: reh:H16_B1528 2.9e-23 sulfatase;
+ COG: COG3119 Arylsulfatase A and related enzymes;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571064.1"
+ /db_xref="GI:161503952"
+ /db_xref="InterPro:IPR000917"
+ /translation="MKAIILLFDSLNKNYLPPYGDLLTKAPNFQRLAAHAATFDKSYV
+ GSMPCMPARRELHTGRYNFLHREWGPLEPFDDSMPELLKKAGIYTHLISDHLHYWEDG
+ GGNYHNRYSSWDVVRGQEGDHWKASVGEPPIPEVLRVPQKQTGGGVSGLWRHDWANRE
+ YIQQEADFPQTKVFDAGCDFIHKNHAEDNWLLQVETFDPHEPFYTTEEYLSLYDDEWQ
+ GPHYDWPRGKVSESEEAIAHIRCRYRALVSMCDRNLGRILDLMDEHDLWRDTMLIVGT
+ DHGFLLGEHGWWAKNQMPYYNEVANNLLFIWDPRSAVCGARRQSLVQMIDWAPTLLDY
+ FQQPIPADMQGQPLAKVIASDEPVREGALFGVFSGHVNVTDGRYVYMRAAQPGREHDI
+ ANYTLMPIKMNARYDVDELGKLSLAPPFNFTKGLQVLRIPAREKYKGVNSFGHLLFDL
+ RDDPQQQHPIHDEAIEARMINLLIRLMKENDAPAEQYRRLGLDVV"
+ misc_feature complement(1977755..1979068)
+ /locus_tag="SARI_02044"
+ /note="Arylsulfatase A and related enzymes [Inorganic ion
+ transport and metabolism]; Region: AslA; COG3119"
+ /db_xref="CDD:225661"
+ misc_feature complement(1977902..1979011)
+ /locus_tag="SARI_02044"
+ /note="Sulfatase; Region: Sulfatase; cl17466"
+ /db_xref="CDD:248020"
+ gene complement(1979078..1979398)
+ /locus_tag="SARI_02045"
+ CDS complement(1979078..1979398)
+ /locus_tag="SARI_02045"
+ /inference="protein motif:HMMPfam:IPR003501"
+ /inference="similar to AA sequence:INSD:AAX64783.1"
+ /note="'KEGG: stm:STM0885 6.2e-52 putative
+ phosphotransferase enzyme II, B component K02822;
+ COG: COG3414 Phosphotransferase system,
+ galactitol-specific IIB component;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571065.1"
+ /db_xref="GI:161503953"
+ /db_xref="InterPro:IPR003501"
+ /translation="MKDSVNILFVCGYGVGSSVMLQSVVKKALAKYDFSFDMEHTAAG
+ EVGGFTDWADIYAISKKLLDVVSLDPKHGQYLIPIENIMDGESIGKQIYEVVEKNFPH
+ LLSK"
+ misc_feature complement(1979114..1979383)
+ /locus_tag="SARI_02045"
+ /note="PTS_IIB_ascorbate: subunit IIB of enzyme II (EII)
+ of the L-ascorbate-specific
+ phosphoenolpyruvate:carbohydrate phosphotransferase system
+ (PTS). In this system, EII is an L-ascorbate-specific
+ permease with two cytoplasmic subunits (IIA and IIB) and
+ a...; Region: PTS_IIB_ascorbate; cd05563"
+ /db_xref="CDD:99905"
+ misc_feature complement(order(1979345..1979350,1979357..1979362,
+ 1979366..1979368))
+ /locus_tag="SARI_02045"
+ /note="active site"
+ /db_xref="CDD:99905"
+ misc_feature complement(order(1979345..1979353,1979357..1979368))
+ /locus_tag="SARI_02045"
+ /note="P-loop; other site"
+ /db_xref="CDD:99905"
+ misc_feature complement(1979366..1979368)
+ /locus_tag="SARI_02045"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:99905"
+ gene complement(1979430..1980773)
+ /locus_tag="SARI_02046"
+ CDS complement(1979430..1980773)
+ /locus_tag="SARI_02046"
+ /inference="protein motif:HMMPfam:IPR007333"
+ /inference="similar to AA sequence:REFSEQ:NP_805775.1"
+ /note="membrane component; functions with enzymes IIB
+ (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for
+ anaerobic utilization and uptake of L-ascorbate; sgaTBA
+ are regulated by yifQ as well as Crp and Fnr"
+ /codon_start=1
+ /transl_table=11
+ /product="PTS system ascorbate-specific transporter
+ subunit IIC"
+ /protein_id="YP_001571066.1"
+ /db_xref="GI:161503954"
+ /db_xref="InterPro:IPR007333"
+ /translation="MEGVQTMFAKFIDVIQTFLTEPAILIGILVGVGYALDKKTPIKI
+ ITGMISAMVGLMMVLFGGFQFSATFKPVAESVSKAYGVHGYLMDSYAMKAATQIALGD
+ NFGYVGYVFVLAFFTNLILVLFGRYTGAKGIFLTGNTGVSHSQAVLWLIVFWLGFGWV
+ QSIVIAGVLTGVFWAFSTTLIVKPIAKVTNNAGFTIAHNQMLGLWFFSKFAHKFGDPE
+ KHDAENLKLPGWLAIFNHNVTAIAIVMTLFVGGFLLATGIDNVQLMAKGKPWYIYIIN
+ LGLQFSMYMVILLQGVRMMVGEINGSFKGWQDRFIPNAIPAVDVAALLPFSPNAATLG
+ FVFCTFGTIFSMGILLLIHSPIMVLPGFVPLFFSGGPIGVLANRMGGYRSVIICTFLL
+ GIIQTFGTVWAIPLTGLAKEGVGWTGIFDWATLWPAICELLKFIASTFHLGPYSI"
+ misc_feature complement(1979463..1980773)
+ /locus_tag="SARI_02046"
+ /note="PTS system ascorbate-specific transporter subunit
+ IIC; Reviewed; Region: PRK12997"
+ /db_xref="CDD:237262"
+ gene complement(1980782..1980949)
+ /locus_tag="SARI_02047"
+ CDS complement(1980782..1980949)
+ /locus_tag="SARI_02047"
+ /inference="similar to AA sequence:INSD:AAV77790.1"
+ /note="'COG: NOG35567 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571067.1"
+ /db_xref="GI:161503955"
+ /translation="MQIKSQIITLNLLMTNFDYYSACKAKLDKVVYRVNFNSISEAIR
+ NVSKGVNHDNE"
+ gene complement(1981068..1982195)
+ /gene="rumB"
+ /locus_tag="SARI_02048"
+ CDS complement(1981068..1982195)
+ /gene="rumB"
+ /locus_tag="SARI_02048"
+ /inference="protein motif:HMMPfam:IPR010280"
+ /inference="protein motif:HMMTigr:IPR011825"
+ /inference="protein motif:ScanRegExp:IPR010280"
+ /inference="similar to AA sequence:SwissProt:Q5PGN2"
+ /note="RNA uridine methyltransferase B; catalyzes the
+ formation of 5-methyl-uridine at position 747 in 23S rRNA"
+ /codon_start=1
+ /transl_table=11
+ /product="23S rRNA methyluridine methyltransferase"
+ /protein_id="YP_001571068.1"
+ /db_xref="GI:161503956"
+ /db_xref="InterPro:IPR010280"
+ /db_xref="InterPro:IPR011825"
+ /translation="MQCALYDAGRCRSCQWITQSVNEQLSAKTADLHRLLAGLPVEQW
+ RTPIGGPEQHFRNKAKMVVSGSVEKPLFGMLHRDGTPVDLCGCPLYPASFAPVFSALK
+ PFIARAGLTPYNVARKRGELKYLLLTESQFDGGMMLRFVLRSETKLTQLRAALPWLRA
+ QLPQLRVITANIQPVHMAIMEGETEIYLTDQHALAERFNDVPLWIRPQSFFQTNPTVA
+ SRLYATARDWVGQLPVRHMWDLFCGVGGFGLHCATPQMQLTGIEIAPEAIACARQSAA
+ ELGLTRLHFQALDSTQFATAQGETPDLVLVNPPRRGIGKPLCDYLAQIAPRFIIYSSC
+ NAQTMAQDIRHLPNYRIQRVQLFDMFPHTAHYEVLTLLCRL"
+ misc_feature complement(1981074..1982192)
+ /gene="rumB"
+ /locus_tag="SARI_02048"
+ /note="23S rRNA (uracil-5-)-methyltransferase RumB;
+ Region: meth_trns_rumB; TIGR02085"
+ /db_xref="CDD:131140"
+ misc_feature complement(<1981269..1981484)
+ /gene="rumB"
+ /locus_tag="SARI_02048"
+ /note="S-adenosylmethionine-dependent methyltransferases
+ (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
+ that use S-adenosyl-L-methionine (SAM or AdoMet) as a
+ substrate for methyltransfer, creating the product
+ S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
+ cd02440"
+ /db_xref="CDD:100107"
+ misc_feature complement(order(1981275..1981277,1981326..1981334,
+ 1981407..1981412,1981458..1981478))
+ /gene="rumB"
+ /locus_tag="SARI_02048"
+ /note="S-adenosylmethionine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:100107"
+ gene complement(1982238..1982639)
+ /locus_tag="SARI_02049"
+ CDS complement(1982238..1982639)
+ /locus_tag="SARI_02049"
+ /inference="similar to AA sequence:INSD:AAV77792.1"
+ /note="'COG: NOG08677 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571069.1"
+ /db_xref="GI:161503957"
+ /translation="MAIILIRGLDVLMIMNTLGIRGMGEFIHRSVQTWSLTLVFLASL
+ VLVFIEIYCAFSLVKGRSWARWVYLATQIIVSGYLWAASLGYGYPELFSIAGESKRAI
+ LHSLFMQKLPDLLILSLLFIPAPSRRFFRLQ"
+ misc_feature complement(1982241..1982639)
+ /locus_tag="SARI_02049"
+ /note="Protein of unknown function (DUF2593); Region:
+ DUF2593; pfam10767"
+ /db_xref="CDD:119287"
+ gene complement(1982785..1983630)
+ /locus_tag="SARI_02050"
+ CDS complement(1982785..1983630)
+ /locus_tag="SARI_02050"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="similar to AA sequence:REFSEQ:YP_151105.1"
+ /note="'KEGG: cyb:CYB_0398 2.8e-14 modB; molybdate ABC
+ transporter, permease protein K02018;
+ COG: COG1177 ABC-type spermidine/putrescine transport
+ system, permease component II;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putrescine transporter subunit: membrane
+ component of ABC superfamily"
+ /protein_id="YP_001571070.1"
+ /db_xref="GI:161503958"
+ /db_xref="InterPro:IPR000515"
+ /translation="MNNLPVVRSPWRILILVLGFTFLYAPMLMLVIYSFNSSKLVTVW
+ AGWSTRWYGELLRDTAMMSAVGLSLTIAACAATMAVILGTIAALVMVRFGRFRGSNGF
+ AFMITAPLVMPDVITGLSLLLLFVALGHAIGWPSDRGMLTIWLAHVTFCTAYVAVVIA
+ SRLRELDSSIEEAAMDLGAAPLKVFFVITLPMIMPAVISGWLLAFTLSLDDLVIASFV
+ SGPGATTLPMLVFSSVRMGVNPEINALATLILGVVGIVGFIAWYLMARAEKQRIRDIQ
+ RARRG"
+ misc_feature complement(1982815..1983630)
+ /locus_tag="SARI_02050"
+ /note="ABC-type spermidine/putrescine transport system,
+ permease component II [Amino acid transport and
+ metabolism]; Region: PotC; COG1177"
+ /db_xref="CDD:224098"
+ misc_feature complement(1982863..1983429)
+ /locus_tag="SARI_02050"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(1982863..1982865,1982872..1982877,
+ 1982884..1982889,1982893..1982898,1982905..1982910,
+ 1982938..1982943,1982980..1982985,1982992..1983003,
+ 1983022..1983024,1983031..1983036,1983076..1983078,
+ 1983127..1983129,1983136..1983141,1983151..1983153,
+ 1983157..1983162,1983169..1983171,1983175..1983177,
+ 1983181..1983183,1983187..1983189,1983265..1983267,
+ 1983271..1983276,1983283..1983312,1983316..1983327,
+ 1983358..1983360,1983373..1983378,1983385..1983390))
+ /locus_tag="SARI_02050"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(1982986..1983003,1983265..1983309))
+ /locus_tag="SARI_02050"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(1982908..1982910,1982938..1982940,
+ 1982947..1982949,1982983..1982985,1983202..1983204,
+ 1983265..1983267))
+ /locus_tag="SARI_02050"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(1983055..1983057,1983067..1983072,
+ 1983088..1983126))
+ /locus_tag="SARI_02050"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene complement(1983627..1984580)
+ /locus_tag="SARI_02051"
+ CDS complement(1983627..1984580)
+ /locus_tag="SARI_02051"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="similar to AA sequence:REFSEQ:YP_215859.1"
+ /note="'KEGG: hpa:HPAG1_0451 2.0e-08 molybdenum ABC
+ transporter ModB K06022;
+ COG: COG1176 ABC-type spermidine/putrescine transport
+ system, permease component I;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="putrescine transporter subunit: membrane
+ component of ABC superfamily"
+ /protein_id="YP_001571071.1"
+ /db_xref="GI:161503959"
+ /db_xref="InterPro:IPR000515"
+ /translation="MSTLEPSARINKPGGAARWVARMQMKQGRKLVIALPYIWLILLF
+ LLPFLIVFKISVAEMARAIPPYTDLLEWADGQLSITLNLGNFLQLTDDPLYFEAYLQS
+ LQIAGISTICCLLLGYPLAWAVAHSKPSTRNILLLLVLLPSWTSFLIRVYAWMGILKN
+ NGVLNNVLLWLEIIDQPLMILHTNLAVYIGIVYAYLPFMVLPIYTALTRIDYSLVEAS
+ LDLGAQPLKTFFSIIVPLTKGGVIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQ
+ EFFNNRDWPVASAVAIIMLLLLIVPIMWFHKHQQKSVGEHG"
+ misc_feature complement(1983738..1984286)
+ /locus_tag="SARI_02051"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(1983756..1983761,1983798..1983803,
+ 1983810..1983821,1983840..1983842,1983849..1983854,
+ 1983894..1983896,1983945..1983947,1983954..1983959,
+ 1983969..1983971,1983975..1983980,1983987..1983989,
+ 1983993..1983995,1983999..1984004,1984116..1984118,
+ 1984122..1984127,1984134..1984163,1984167..1984178,
+ 1984206..1984208,1984221..1984226,1984233..1984238))
+ /locus_tag="SARI_02051"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(1983804..1983821,1984116..1984160))
+ /locus_tag="SARI_02051"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(1983756..1983758,1983765..1983767,
+ 1983801..1983803,1984017..1984019,1984116..1984118))
+ /locus_tag="SARI_02051"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(1983873..1983875,1983885..1983890,
+ 1983906..1983944))
+ /locus_tag="SARI_02051"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene complement(1984590..1985723)
+ /gene="potG"
+ /locus_tag="SARI_02052"
+ CDS complement(1984590..1985723)
+ /gene="potG"
+ /locus_tag="SARI_02052"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMPfam:IPR013611"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR005893"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="protein motif:superfamily:IPR008995"
+ /inference="similar to AA sequence:INSD:AAL19814.1"
+ /note="part of the PotFGHI ATP-dependent putrescine
+ transporter"
+ /codon_start=1
+ /transl_table=11
+ /product="putrescine transporter ATP-binding subunit"
+ /protein_id="YP_001571072.1"
+ /db_xref="GI:161503960"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR005893"
+ /db_xref="InterPro:IPR008995"
+ /db_xref="InterPro:IPR013611"
+ /translation="MNDVPHRPQVKPRKALTPLLEIRNLTKSFDGQHAVDDVSLTIYK
+ GEIFALLGASGCGKSTLLRMLAGFEPPNSGQIMLDGVDLAHVPPYQRPINMMFQSYAL
+ FPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKPHQLSGGQRQRVAL
+ ARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVADILERVGVTCVMVTHDQEEAMTMAG
+ RIAIMNRGKFVQIGEPEEIYEHPTTRYSAEFIGSVNVFGGLLKAREEDGLVIDAPGLV
+ HPLKVDADASVVDNVPVYVALRPEKIMLCEAPPADGYNFAVGEVAHIAYLGDLSIYHV
+ RLKSGQMISAQLQNAHRYRKGLPTWGDEVRLCWEADSCVVLTV"
+ misc_feature complement(1984593..1985723)
+ /gene="potG"
+ /locus_tag="SARI_02052"
+ /note="putrescine transporter ATP-binding subunit;
+ Provisional; Region: potG; PRK11607"
+ /db_xref="CDD:183226"
+ misc_feature complement(1984971..1985666)
+ /gene="potG"
+ /locus_tag="SARI_02052"
+ /note="ATP-binding cassette domain of the polyamine
+ transporter; Region: ABC_PotA_N; cd03300"
+ /db_xref="CDD:213267"
+ misc_feature complement(1985547..1985570)
+ /gene="potG"
+ /locus_tag="SARI_02052"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213267"
+ misc_feature complement(order(1985100..1985102,1985199..1985204,
+ 1985430..1985432,1985544..1985552,1985556..1985561))
+ /gene="potG"
+ /locus_tag="SARI_02052"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213267"
+ misc_feature complement(1985430..1985441)
+ /gene="potG"
+ /locus_tag="SARI_02052"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213267"
+ misc_feature complement(1985247..1985276)
+ /gene="potG"
+ /locus_tag="SARI_02052"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213267"
+ misc_feature complement(1985199..1985216)
+ /gene="potG"
+ /locus_tag="SARI_02052"
+ /note="Walker B; other site"
+ /db_xref="CDD:213267"
+ misc_feature complement(1985181..1985192)
+ /gene="potG"
+ /locus_tag="SARI_02052"
+ /note="D-loop; other site"
+ /db_xref="CDD:213267"
+ misc_feature complement(1985094..1985114)
+ /gene="potG"
+ /locus_tag="SARI_02052"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213267"
+ misc_feature complement(1984599..1984841)
+ /gene="potG"
+ /locus_tag="SARI_02052"
+ /note="TOBE domain; Region: TOBE_2; pfam08402"
+ /db_xref="CDD:219823"
+ gene complement(1985810..1986925)
+ /locus_tag="SARI_02053"
+ CDS complement(1985810..1986925)
+ /locus_tag="SARI_02053"
+ /inference="protein motif:FPrintScan:IPR001188"
+ /inference="protein motif:HMMPfam:IPR006059"
+ /inference="similar to AA sequence:INSD:AAX64776.1"
+ /note="'COG: COG0687 Spermidine/putrescine-binding
+ periplasmic protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="putrescine transporter subunit:
+ periplasmic-binding component of ABC superfamily"
+ /protein_id="YP_001571073.1"
+ /db_xref="GI:161503961"
+ /db_xref="InterPro:IPR001188"
+ /db_xref="InterPro:IPR006059"
+ /translation="MMTALKKKWLSGLVAGALMVVSVGTLAAEQKTLHIYNWSDYIAP
+ DTVANFEKETGINVIYDVFDSNEVLEGKLMAGSTGFDLVVPSASFLERQLTAGVFQPL
+ DKSKLPGWKNLDPELLKLVAKHDPDNKYAMPYMWATTGIGYNVDKVKAVLGDDAPVNS
+ WDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKL
+ RPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMA
+ FFDVFAMPADGRNKDEAYQFLNYLLRPDVIAHISDHVFYANANKAATALVSQQVRDNP
+ GIYPPADVRDKLFTLKVQEPKIDRVRTRAWTKVKSGK"
+ misc_feature complement(1985813..1986922)
+ /locus_tag="SARI_02053"
+ /note="putrescine transporter subunit: periplasmic-binding
+ component of ABC superfamily; Provisional; Region:
+ PRK10682"
+ /db_xref="CDD:182645"
+ misc_feature complement(1985960..1986685)
+ /locus_tag="SARI_02053"
+ /note="Bacterial extracellular solute-binding protein;
+ Region: SBP_bac_1; cl17199"
+ /db_xref="CDD:247753"
+ gene complement(1987271..1987747)
+ /locus_tag="SARI_02054"
+ CDS complement(1987271..1987747)
+ /locus_tag="SARI_02054"
+ /inference="protein motif:superfamily:IPR006121"
+ /inference="similar to AA sequence:INSD:AAL19812.1"
+ /note="'COG: NOG08676 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571074.1"
+ /db_xref="GI:161503962"
+ /db_xref="InterPro:IPR006121"
+ /translation="MISLVVPTLDTLRQWLDDLGMNFFECDTCQALHLPHMQNFDGVY
+ DAKIDLVDNTILFSAMAEVRPSALLPLAADLSAINASSLTVKAFLDMQDDNLPKLVVC
+ QSLSVMQGVTYEQFEWFVRQSEEQISMVILEAGAHQLLFNAEEDAQKTSAVDHFLH"
+ misc_feature complement(1987355..1987723)
+ /locus_tag="SARI_02054"
+ /note="Putative bacterial sensory transduction regulator;
+ Region: YbjN; pfam10722"
+ /db_xref="CDD:220862"
+ gene complement(1987844..1988746)
+ /locus_tag="SARI_02055"
+ CDS complement(1987844..1988746)
+ /locus_tag="SARI_02055"
+ /inference="protein motif:Gene3D:IPR013816"
+ /inference="protein motif:HMMPfam:IPR013651"
+ /inference="protein motif:HMMTigr:IPR004666"
+ /inference="similar to AA sequence:REFSEQ:YP_151110.1"
+ /note="'KEGG: ava:Ava_1836 4.0e-18 glutaTHIone synthetase
+ K01920;
+ COG: COG0189 GlutaTHIone synthase/Ribosomal protein S6
+ modification enzyme (glutaminyl transferase);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="ribosomal protein S6 modification protein"
+ /protein_id="YP_001571075.2"
+ /db_xref="GI:448236252"
+ /db_xref="InterPro:IPR004666"
+ /db_xref="InterPro:IPR013651"
+ /db_xref="InterPro:IPR013816"
+ /translation="MKIAILSRDGTLYSCKRLREAAMRRGHLVEILDPLSCYMNINPA
+ ASSIHYKGRRLPHFDAVIPRIGSAITFYGTAALRQFELLGSYPLNESVAITRARDKLR
+ SLQLLARQGIDLPITGIAHSPDDTSDLIEMVGGAPLVVKLVEGTQGIGVVLAETRQAA
+ ESVIDAFRGLNAHILVQEYIAEAKGCDIRCLVVGNEVVAAIERCAKAGDFRSNLHRGG
+ VASIATITPRERDIAIKAAQTLGLDVAGVDILRAARGPLVMEVNASPGLEGIEKTTGV
+ DIAGRMIQWIERHATPEFCLKIGG"
+ misc_feature complement(1987847..1988746)
+ /locus_tag="SARI_02055"
+ /note="ribosomal protein S6 modification protein;
+ Provisional; Region: PRK10446"
+ /db_xref="CDD:182468"
+ misc_feature complement(1987889..1988458)
+ /locus_tag="SARI_02055"
+ /note="RimK-like ATP-grasp domain; Region: RimK;
+ pfam08443"
+ /db_xref="CDD:117020"
+ gene complement(1988804..1989526)
+ /locus_tag="SARI_02056"
+ CDS complement(1988804..1989526)
+ /locus_tag="SARI_02056"
+ /inference="protein motif:HMMPfam:IPR000415"
+ /inference="similar to AA sequence:REFSEQ:NP_459851.1"
+ /note="NADPH-dependent; oxygen-insensitive; catalyzes the
+ reduction of nitroaromatic compounds"
+ /codon_start=1
+ /transl_table=11
+ /product="nitroreductase A"
+ /protein_id="YP_001571076.1"
+ /db_xref="GI:161503964"
+ /db_xref="InterPro:IPR000415"
+ /translation="MSPTIELLCGHRSIRHFTDEPVTDAQREAIIAAARSTSSSSFLQ
+ CSSIIRITDKVLRHALVPLTGGQKHVAQAAEFWVFCADFNRHLQICPDAQLGLAEQLL
+ LGVVDTAMMGQNALTAAESLGLGGVYIGGIRNNIESVTELLKLPKHVLPLFGLCLGWP
+ ADNPDLKPRLPAALVVHENQYQPLDENLLARYDEQLAEYYLTRGSNPRRDTWSDHIRR
+ TLIKENRPFILEYLHKQGWATR"
+ misc_feature complement(1988852..1989517)
+ /locus_tag="SARI_02056"
+ /note="This family contains NADPH-dependent flavin
+ reductase and oxygen-insensitive nitroreductase. These
+ enzymes are homodimeric flavoproteins that contain one FMN
+ per monomer as a cofactor. Flavin reductase catalyzes the
+ reduction of flavin by using NADPH as...; Region:
+ NfsA_FRP; cd02146"
+ /db_xref="CDD:239060"
+ misc_feature complement(order(1988852..1988854,1988861..1988869,
+ 1988891..1988893,1988951..1988953,1988996..1989004,
+ 1989017..1989025,1989098..1989100,1989128..1989130,
+ 1989164..1989166,1989176..1989178,1989185..1989190,
+ 1989197..1989199,1989218..1989220,1989281..1989283,
+ 1989359..1989361,1989368..1989373,1989377..1989385,
+ 1989389..1989391,1989395..1989397,1989401..1989403,
+ 1989413..1989424,1989428..1989430,1989494..1989496,
+ 1989500..1989505,1989515..1989517))
+ /locus_tag="SARI_02056"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:239060"
+ misc_feature complement(order(1989020..1989022,1989026..1989028,
+ 1989068..1989070,1989125..1989130,1989134..1989139,
+ 1989320..1989322,1989326..1989328,1989482..1989484,
+ 1989488..1989490,1989494..1989496))
+ /locus_tag="SARI_02056"
+ /note="FMN binding site [chemical binding]; other site"
+ /db_xref="CDD:239060"
+ misc_feature complement(order(1988918..1988920,1988927..1988932,
+ 1989026..1989028,1989032..1989034,1989125..1989130,
+ 1989401..1989403,1989482..1989484))
+ /locus_tag="SARI_02056"
+ /note="NADPH bind site [chemical binding]; other site"
+ /db_xref="CDD:239060"
+ gene complement(1989510..1989827)
+ /locus_tag="SARI_02057"
+ CDS complement(1989510..1989827)
+ /locus_tag="SARI_02057"
+ /inference="protein motif:HMMPfam:IPR010815"
+ /inference="similar to AA sequence:INSD:CAD05312.1"
+ /note="YbjC; located in the same operon as the nfsA gene;
+ member of the soxRS regulon which mediates in part the
+ increased levels of superoxide in response to oxidative
+ stress; induced by paraquat; regulated by SoxS; unknown
+ function"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571077.1"
+ /db_xref="GI:161503965"
+ /db_xref="InterPro:IPR010815"
+ /translation="MLQFTGRLDMRTIGVLPKSVVLLECLGMILLALALLSLNHYFTL
+ PAPFNTPLAGVLMVFLGVVLILPAAVAMMWRIAQTLAPQLMKRPPDISFRSDREKHNE
+ SDY"
+ misc_feature complement(1989513..1989800)
+ /locus_tag="SARI_02057"
+ /note="Protein of unknown function (DUF1418); Region:
+ DUF1418; pfam07214"
+ /db_xref="CDD:148676"
+ gene 1989970..1990233
+ /gene="grxA"
+ /locus_tag="SARI_02058"
+ CDS 1989970..1990233
+ /gene="grxA"
+ /locus_tag="SARI_02058"
+ /inference="protein motif:FPrintScan:IPR002109"
+ /inference="protein motif:Gene3D:IPR012335"
+ /inference="protein motif:HMMPfam:IPR002109"
+ /inference="protein motif:HMMTigr:IPR011902"
+ /inference="protein motif:ScanRegExp:IPR011767"
+ /inference="protein motif:superfamily:IPR012336"
+ /inference="similar to AA sequence:SwissProt:P0A1P9"
+ /note="functions as an electron carrier in the
+ glutathione-dependent synthesis of deoxyribonucleotides by
+ the enzyme ribonucleotide reductase; also involved in
+ reducing some disulfides in a coupled system with
+ glutathione reductase"
+ /codon_start=1
+ /transl_table=11
+ /product="glutaredoxin 1"
+ /protein_id="YP_001571078.1"
+ /db_xref="GI:161503966"
+ /db_xref="InterPro:IPR002109"
+ /db_xref="InterPro:IPR011767"
+ /db_xref="InterPro:IPR011902"
+ /db_xref="InterPro:IPR012335"
+ /db_xref="InterPro:IPR012336"
+ /translation="MFTVIFGRPGCPYCVRAKELAEKLSNERDDFNYRYIDIHAEGIT
+ KADLEKTVGKPVETVPQIFVDQKHIGGCTDFEAWAKENLNLFA"
+ misc_feature 1989979..1990209
+ /gene="grxA"
+ /locus_tag="SARI_02058"
+ /note="Glutaredoxin (GRX) family; composed of GRX,
+ approximately 10 kDa in size, and proteins containing a
+ GRX or GRX-like domain. GRX is a glutathione (GSH)
+ dependent reductase, catalyzing the disulfide reduction of
+ target proteins such as ribonucleotide...; Region:
+ GRX_family; cd02066"
+ /db_xref="CDD:239017"
+ misc_feature order(1989991..1989993,1990000..1990008,1990141..1990146)
+ /gene="grxA"
+ /locus_tag="SARI_02058"
+ /note="GSH binding site [chemical binding]; other site"
+ /db_xref="CDD:239017"
+ misc_feature order(1990000..1990002,1990009..1990011)
+ /gene="grxA"
+ /locus_tag="SARI_02058"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:239017"
+ unsure 1990095..1990171
+ /gene="grxA"
+ /locus_tag="SARI_02058"
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(1990265..1990642)
+ /locus_tag="SARI_02059"
+ CDS complement(1990265..1990642)
+ /locus_tag="SARI_02059"
+ /inference="protein motif:superfamily:IPR000883"
+ /inference="similar to AA sequence:INSD:AAV77802.1"
+ /note="'COG: NOG09759 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571079.1"
+ /db_xref="GI:161503967"
+ /db_xref="InterPro:IPR000883"
+ /translation="MKHKHGWAGVVCCFVLFIVVCLSLTLHVQGAFRAAGHPEIGLLF
+ FTLPGAVASFFSHRREVIRPLIGALLAAPFCLVLMRFVFMPTRSLWQELAWLFSAVFW
+ CALGALCYLFISSLFSHRRKKHR"
+ misc_feature complement(1990268..1990642)
+ /locus_tag="SARI_02059"
+ /note="Putative inner membrane protein of
+ Enterobacteriaceae; Region: YbjM; pfam11045"
+ /db_xref="CDD:151492"
+ gene 1990914..1992599
+ /locus_tag="SARI_02060"
+ CDS 1990914..1992599
+ /locus_tag="SARI_02060"
+ /inference="protein motif:HMMPfam:IPR006037"
+ /inference="protein motif:HMMPfam:IPR006512"
+ /inference="protein motif:HMMTigr:IPR006512"
+ /inference="similar to AA sequence:INSD:AAL19806.1"
+ /note="'COG: COG2985 Predicted permease;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571080.1"
+ /db_xref="GI:161503968"
+ /db_xref="InterPro:IPR006037"
+ /db_xref="InterPro:IPR006512"
+ /translation="MNINVADLLNGNYILLLFVVLALGLCLGKLRLGSIQLGNSIGVL
+ VVSLLLGQQHFSINTDALNLGFMLFIFCVGVEAGPNFFSIFFRDGKNYLMLALVMVGS
+ ALLIALGLGKLFGWDIGLTAGMLAGSMTSTPVLVGAGDTLRHSGIASTQLSSALDNLS
+ LGYALTYLIGLVSLIVGARYLPKLQHQDLQTSAQQIARERGLDTDANRKVYLPVIRAY
+ RVGPELVAWTDGKNLRELGIYRQTGCYIERIRRNGILANPDGDAVLQMGDEIALVGYP
+ DAHARLDPSFRNGKEVFDRDLLDMRIVTEEIVVKNHNAVGRRLAQLKLTDHGCFLNRV
+ IRSQIEMPIDDNVVLNKGDVLQVSGDARRVKTIADRIGFISIHSQVTDLLAFCAFFII
+ GLMIGMITFQFSNFSFGIGNAAGLLFAGIMLGFLRANHPTFGYIPQGALNMVKEFGLM
+ VFMAGVGLSAGSGISNGLGAVGGQMLIAGLVVSLAPVVICFLFGAYVLRMNRALLFGA
+ MMGARTCAPAMEIISDTARSNIPALGYAGTYAIANVLLTLAGTLIVIIWPGLG"
+ misc_feature 1990914..1992587
+ /locus_tag="SARI_02060"
+ /note="putative transporter; Provisional; Region:
+ PRK04972"
+ /db_xref="CDD:179905"
+ misc_feature <1991073..1991462
+ /locus_tag="SARI_02060"
+ /note="Predicted Permease Membrane Region; Region:
+ Asp-Al_Ex; pfam06826"
+ /db_xref="CDD:219194"
+ misc_feature 1991556..1991774
+ /locus_tag="SARI_02060"
+ /note="TrkA-C domain; Region: TrkA_C; pfam02080"
+ /db_xref="CDD:216867"
+ misc_feature 1991820..1992029
+ /locus_tag="SARI_02060"
+ /note="TrkA-C domain; Region: TrkA_C; pfam02080"
+ /db_xref="CDD:216867"
+ misc_feature 1992081..1992536
+ /locus_tag="SARI_02060"
+ /note="AspT/YidE/YbjL antiporter duplication domain;
+ Region: YidE_YbjL_dupl; TIGR01625"
+ /db_xref="CDD:130686"
+ gene 1992679..1992757
+ /locus_tag="SARI_02061"
+ misc_RNA 1992679..1992757
+ /locus_tag="SARI_02061"
+ /product="RybB RNA"
+ /inference="nucleotide motif:Rfam:RF00110"
+ /note="Rfam score 90.16"
+ gene 1993503..1994714
+ /locus_tag="SARI_02062"
+ CDS 1993503..1994714
+ /locus_tag="SARI_02062"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="similar to AA sequence:REFSEQ:NP_459845.1"
+ /note="'COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571081.1"
+ /db_xref="GI:161503969"
+ /db_xref="InterPro:IPR011701"
+ /translation="MTVLSSRNALKRRTWALFMFFFLPGLLMASWATRTPAIRDILSV
+ STAEMGAVLFGLSIGSMSGILCSAWLVKRFGTRKVIRTTMTCAVTGMVILSVALWCAS
+ PLIFALGLAVFGASFGAAEVAINVEGAAVERELNKTVLPMMHGFYSFGTLAGAGVGMA
+ LTALSVPANIHIILAAAVAIAPIFIAIRAIPDGTGKNASEGPHLQEKGLPFYRDIQLL
+ LIGVVVLAMAFAEGSANDWLPLLMVDGHGFSPTSGSLIYAGFTLGMTVGRFTGGWFID
+ HYSRVTVVRASALMGALGIGLIIFVDSDWVAGVSVILWGLGASLGFPLTISAASDTGP
+ DAPTRVSVVATTGYLAFLVGPPLLGYLGEHYGLRSAMMVVLALVILAALVAKAVAKPV
+ STPQPVMEHNA"
+ misc_feature 1993587..1994606
+ /locus_tag="SARI_02062"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature order(1993593..1993601,1993605..1993610,1993659..1993661,
+ 1993668..1993673,1993680..1993682,1993692..1993697,
+ 1993701..1993706,1993842..1993847,1993854..1993859,
+ 1993866..1993871,1993878..1993880,1993920..1993925,
+ 1993932..1993937,1993953..1993955,1994184..1994186,
+ 1994193..1994198,1994205..1994210,1994217..1994219,
+ 1994259..1994261,1994271..1994273,1994283..1994285,
+ 1994292..1994294,1994304..1994306,1994445..1994447,
+ 1994454..1994459,1994466..1994468,1994478..1994483,
+ 1994490..1994492,1994517..1994522,1994529..1994534,
+ 1994541..1994546,1994553..1994555)
+ /locus_tag="SARI_02062"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ misc_feature 1993608..1994567
+ /locus_tag="SARI_02062"
+ /note="Major Facilitator Superfamily; Region: MFS_1;
+ pfam07690"
+ /db_xref="CDD:219516"
+ gene 1994711..1995526
+ /locus_tag="SARI_02063"
+ CDS 1994711..1995526
+ /locus_tag="SARI_02063"
+ /inference="protein motif:HMMPfam:IPR013200"
+ /inference="protein motif:HMMTigr:IPR000150"
+ /inference="protein motif:HMMTigr:IPR006379"
+ /inference="protein motif:ScanRegExp:IPR000150"
+ /inference="similar to AA sequence:INSD:AAL19803.1"
+ /note="'KEGG: ecp:ECP_0835 7.0e-76 putative hydrolase of
+ the HAD superfamily K07757;
+ COG: COG0561 Predicted hydrolases of the HAD superfamily;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571082.1"
+ /db_xref="GI:161503970"
+ /db_xref="InterPro:IPR000150"
+ /db_xref="InterPro:IPR006379"
+ /db_xref="InterPro:IPR013200"
+ /translation="MSIKLIAVDMDGTFLSDQKTYNRDRFMAQYQQMKRQGIRFVVAS
+ GNQYYQLISFFPDIAHEIAFVAENGGWVVSEGEDVFNGELTKADFQTVVEHLLTRTDL
+ EIIACGKNSAYTLKRYNDALKAVAAMYYHRLEFVDNFNNINDVFFKFGLNITDERIPE
+ VQAALHGAIGDIMVPVHTGYGSIDLIIPGVHKANGLRLLQQRWGIHDSEVVAFGDGGN
+ DIEMLRQAGLSFAMSHASEAVAAAAKYRAGSNNQEGVLDIIDSVLNNEPPFNV"
+ misc_feature 1994711..1995508
+ /locus_tag="SARI_02063"
+ /note="Predicted hydrolases of the HAD superfamily
+ [General function prediction only]; Region: Cof; COG0561"
+ /db_xref="CDD:223635"
+ misc_feature 1994723..>1994956
+ /locus_tag="SARI_02063"
+ /note="Haloacid dehalogenase-like hydrolases. The haloacid
+ dehalogenase-like (HAD) superfamily includes L-2-haloacid
+ dehalogenase, epoxide hydrolase, phosphoserine
+ phosphatase, phosphomannomutase, phosphoglycolate
+ phosphatase, P-type ATPase, and many others; Region:
+ HAD_like; cl17915"
+ /db_xref="CDD:248469"
+ misc_feature order(1994735..1994743,1994840..1994845)
+ /locus_tag="SARI_02063"
+ /note="active site"
+ /db_xref="CDD:119389"
+ misc_feature 1994735..1994752
+ /locus_tag="SARI_02063"
+ /note="motif I; other site"
+ /db_xref="CDD:119389"
+ misc_feature 1994840..1994842
+ /locus_tag="SARI_02063"
+ /note="motif II; other site"
+ /db_xref="CDD:119389"
+ misc_feature <1995206..1995394
+ /locus_tag="SARI_02063"
+ /note="Haloacid dehalogenase-like hydrolases. The haloacid
+ dehalogenase-like (HAD) superfamily includes L-2-haloacid
+ dehalogenase, epoxide hydrolase, phosphoserine
+ phosphatase, phosphomannomutase, phosphoglycolate
+ phosphatase, P-type ATPase, and many others; Region:
+ HAD_like; cd01427"
+ /db_xref="CDD:119389"
+ gene complement(1995580..1996812)
+ /locus_tag="SARI_02064"
+ CDS complement(1995580..1996812)
+ /locus_tag="SARI_02064"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="protein motif:ScanRegExp:IPR005829"
+ /inference="similar to AA sequence:INSD:CAD05305.1"
+ /note="'KEGG: shn:Shewana3_1692 2.5e-07 Xaa-His
+ dipeptidase K01270;
+ COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571083.1"
+ /db_xref="GI:161503971"
+ /db_xref="InterPro:IPR005829"
+ /db_xref="InterPro:IPR011701"
+ /translation="MHNRLQSGVRLGRQALLFPLCLVLYEFSTYIGNDMIQPGMLAVV
+ EQYQAGLDWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVVWFIVTCLATLLA
+ KNIEQFTFLRFLQGISLCFIGAVGYAAIQESFEEAVCIKITALMANVALIAPLLGPLV
+ GAAWVHVLPWEGMFILFAALAAIAFFGLQRAMPETATRRGETLSFKALGRDYRLVIKN
+ RRFVAGALALGFVSLPLLAWIAQSPIIIISGEQLSSYEYGLLQVPVFGALIAGNLVLA
+ RLTSRRTVRSLIVMGGWPIVAGLIIAAAATVVSSHAYLWMTAGLSVYAFGIGLANAGL
+ VRLTLFSSDMSKGTVSAAMGMLQMLIFTVGIEVSKHAWLSGGNGLFSLFNLANGILWL
+ LLMLVFLKDKRTGNLQTV"
+ misc_feature complement(1995595..1996800)
+ /locus_tag="SARI_02064"
+ /note="multidrug efflux system translocase MdfA;
+ Provisional; Region: PRK15402"
+ /db_xref="CDD:185300"
+ misc_feature complement(1995619..1996755)
+ /locus_tag="SARI_02064"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature complement(order(1995730..1995732,1995739..1995744,
+ 1995751..1995756,1995763..1995768,1995799..1995801,
+ 1995808..1995813,1995820..1995822,1995829..1995834,
+ 1995841..1995843,1995997..1995999,1996009..1996011,
+ 1996018..1996020,1996030..1996032,1996042..1996044,
+ 1996084..1996086,1996093..1996098,1996105..1996110,
+ 1996117..1996119,1996351..1996353,1996369..1996374,
+ 1996381..1996386,1996420..1996422,1996429..1996434,
+ 1996441..1996446,1996453..1996458,1996594..1996599,
+ 1996603..1996608,1996618..1996620,1996627..1996632,
+ 1996639..1996641,1996690..1996695,1996699..1996707,
+ 1996714..1996716))
+ /locus_tag="SARI_02064"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene 1997128..1997736
+ /locus_tag="SARI_02065"
+ CDS 1997128..1997736
+ /locus_tag="SARI_02065"
+ /inference="protein motif:HMMPfam:IPR000326"
+ /inference="protein motif:HMMSmart:IPR000326"
+ /inference="protein motif:superfamily:IPR008934"
+ /inference="similar to AA sequence:REFSEQ:YP_215846.1"
+ /note="'KEGG: btk:BT9727_2194 5.0e-11 probable
+ phosphatase, PAP2 superfamily; possible bacitracin
+ transport permease K01112;
+ COG: COG0671 Membrane-associated phospholipid phosphatase;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="undecaprenyl pyrophosphate phosphatase"
+ /protein_id="YP_001571084.1"
+ /db_xref="GI:161503972"
+ /db_xref="InterPro:IPR000326"
+ /db_xref="InterPro:IPR008934"
+ /translation="MLENLNNSLFYFINATPDSAQWTISLAIFIAKDVINIVLLLAVV
+ LWLWGPRDQVCAQRQLIVKICIALIISLTVSWTMGHLFPHDRPFVDHIGYNFLHHAAD
+ DSFPSDHGTVIFTFALAFLFWHRLWSGLVMMAIAITIAWSRVYLGVHWPLDMIGALLV
+ AMLGCLSTQLIWQRYGAPVYQALQRYYRFCFALPIRKGWVRD"
+ misc_feature 1997194..1997634
+ /locus_tag="SARI_02065"
+ /note="PAP2_like proteins, BcrC_like subfamily. Several
+ members of this family have been annotated as bacitracin
+ transport permeases, as it was suspected that they form
+ the permease component of an ABC transporter system. It
+ was shown, however, that BcrC from...; Region:
+ PAP2_BcrC_like; cd03385"
+ /db_xref="CDD:239480"
+ misc_feature <1997305..1997649
+ /locus_tag="SARI_02065"
+ /note="Membrane-associated phospholipid phosphatase [Lipid
+ metabolism]; Region: PgpB; COG0671"
+ /db_xref="CDD:223743"
+ misc_feature order(1997383..1997385,1997446..1997454,1997554..1997556,
+ 1997572..1997574,1997584..1997586)
+ /locus_tag="SARI_02065"
+ /note="active site"
+ /db_xref="CDD:239480"
+ gene 1997808..1998566
+ /locus_tag="SARI_02066"
+ CDS 1997808..1998566
+ /locus_tag="SARI_02066"
+ /inference="protein motif:HMMPfam:IPR001034"
+ /inference="protein motif:HMMSmart:IPR001034"
+ /inference="protein motif:ScanRegExp:IPR001034"
+ /inference="similar to AA sequence:REFSEQ:NP_459841.1"
+ /note="'COG: COG1349 Transcriptional regulators of sugar
+ metabolism;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional repressor DeoR"
+ /protein_id="YP_001571085.1"
+ /db_xref="GI:161503973"
+ /db_xref="InterPro:IPR001034"
+ /translation="METRRDERIGQLLQALKRSDKLHLKEAAILLGVSEMTIRRDLNN
+ KSAPVVLLGGYIVLEPRSASHYLLSDQKSRLVEEKRHAAQLAASLVQAHQTVFIDCGT
+ TTPWIIEAIDNDLPFTAVCYSLNTFLALQDKPHCRAILSGGEFHASNAIFKPLDFNET
+ LNNICPDIAFYSAAGVHTSKGATCFNLEELPVKHWAMTMAQCHVLVVDHSKFGKVRPA
+ RMGELSRFDTIISDRRPDDAFVAYAKAQHINLMF"
+ misc_feature 1997808..1998563
+ /locus_tag="SARI_02066"
+ /note="DNA-binding transcriptional repressor DeoR;
+ Provisional; Region: PRK10681"
+ /db_xref="CDD:182644"
+ misc_feature 1997829..1997990
+ /locus_tag="SARI_02066"
+ /note="DeoR-like helix-turn-helix domain; Region:
+ HTH_DeoR; pfam08220"
+ /db_xref="CDD:116806"
+ misc_feature 1998033..1998506
+ /locus_tag="SARI_02066"
+ /note="DeoR C terminal sensor domain; Region: DeoRC;
+ pfam00455"
+ /db_xref="CDD:201239"
+ gene complement(1998611..1999813)
+ /locus_tag="SARI_02067"
+ CDS complement(1998611..1999813)
+ /locus_tag="SARI_02067"
+ /inference="protein motif:HMMPfam:IPR001967"
+ /inference="protein motif:HMMPfam:IPR012907"
+ /inference="protein motif:superfamily:IPR012338"
+ /inference="similar to AA sequence:REFSEQ:YP_215844.1"
+ /note="'penicillin-binding protein 6a; removes C-terminal
+ D-alanyl residues from sugar-peptide cell wall precursors;
+ one of four, DD-carboxypeptidase low-molecular weight
+ penicillin-binding proteins that remove terminal D-alanine
+ from pentapeptide side chains'"
+ /codon_start=1
+ /transl_table=11
+ /product="D-alanyl-D-alanine carboxypeptidase fraction C"
+ /protein_id="YP_001571086.1"
+ /db_xref="GI:161503974"
+ /db_xref="InterPro:IPR001967"
+ /db_xref="InterPro:IPR012338"
+ /db_xref="InterPro:IPR012907"
+ /translation="MMQYASSFRSLTAGLVLLFLFASSVKAEEQTIAPPDVDARAWIL
+ MDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKAGKIKLTDMVTVGKDAWATGN
+ PALRGSSVMFLKPGDQVSVADLNKGIIIQSGNDACIALADYVAGSQESFIGLMNAYAK
+ RLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIHDVPDEYALHKEKEFTFNNIRQP
+ NRNRLLWSTNLQVDGMKTGTTSGAGYNLVASATQGDMRLISVVLGAKTDRIRFNESEK
+ LLTWGFRFFETVTPIKPDATFVTQRVWFGDQREVNLGAGDAGSVTIPRGQLKNLKASF
+ TLNEPQLTAPLKKGQIVGTIDFQLNGKSIEQRPLMVMENVDEGGFFSRMWDFVLMKFH
+ QWFGGWFS"
+ misc_feature complement(1998614..1999813)
+ /locus_tag="SARI_02067"
+ /note="D-alanyl-D-alanine carboxypeptidase fraction C;
+ Provisional; Region: PRK10001"
+ /db_xref="CDD:182189"
+ misc_feature complement(1998929..1999792)
+ /locus_tag="SARI_02067"
+ /note="Beta-lactamase enzyme family; Region:
+ Beta-lactamase2; cl17872"
+ /db_xref="CDD:248426"
+ misc_feature complement(1998686..1998961)
+ /locus_tag="SARI_02067"
+ /note="Penicillin-binding protein 5, C-terminal domain;
+ Region: PBP5_C; smart00936"
+ /db_xref="CDD:198004"
+ gene 2000056..2000682
+ /locus_tag="SARI_02068"
+ CDS 2000056..2000682
+ /locus_tag="SARI_02068"
+ /inference="protein motif:Gene3D:IPR012335"
+ /inference="protein motif:HMMPfam:IPR004045"
+ /inference="protein motif:HMMPfam:IPR004046"
+ /inference="protein motif:superfamily:IPR010987"
+ /inference="protein motif:superfamily:IPR012336"
+ /inference="similar to AA sequence:REFSEQ:YP_215843.1"
+ /note="'KEGG: eci:UTI89_C0841 1.1e-93 yliJ; hypothetical
+ GST-like protein YliJ K00799;
+ COG: COG0625 GlutaTHIone S-transferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571087.1"
+ /db_xref="GI:161503975"
+ /db_xref="InterPro:IPR004045"
+ /db_xref="InterPro:IPR004046"
+ /db_xref="InterPro:IPR010987"
+ /db_xref="InterPro:IPR012335"
+ /db_xref="InterPro:IPR012336"
+ /translation="MITLWGRNNSTNVKKVLWTLEELELPYQQIQAGGKFGVNHDADY
+ LAMNPNGLVPLLKDDETNLLLWESNAIVRYLAAQYGQNRLWVDNPARRAEGEKWMDWA
+ NQTLSPAHRVILMGLVRTPPEKRDQAAIEAGIEKCDSLFALLDDALARQPWFSGDNFG
+ TGDIAIAPFVYNLLNVGLKWTPRPNLERWYQQLTERPAFRKVVMIPVT"
+ misc_feature 2000059..2000661
+ /locus_tag="SARI_02068"
+ /note="Glutathione S-transferase [Posttranslational
+ modification, protein turnover, chaperones]; Region: Gst;
+ COG0625"
+ /db_xref="CDD:223698"
+ misc_feature 2000059..2000283
+ /locus_tag="SARI_02068"
+ /note="GST_N family, unknown subfamily 2; composed of
+ uncharacterized bacterial proteins with similarity to
+ GSTs. GSTs are cytosolic dimeric proteins involved in
+ cellular detoxification by catalyzing the conjugation of
+ glutathione (GSH) with a wide range of...; Region:
+ GST_N_2; cd03047"
+ /db_xref="CDD:239345"
+ misc_feature order(2000089..2000091,2000095..2000100,2000104..2000109,
+ 2000116..2000121,2000260..2000262,2000269..2000274)
+ /locus_tag="SARI_02068"
+ /note="putative C-terminal domain interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:239345"
+ misc_feature order(2000089..2000091,2000209..2000217,2000254..2000259)
+ /locus_tag="SARI_02068"
+ /note="putative GSH binding site (G-site) [chemical
+ binding]; other site"
+ /db_xref="CDD:239345"
+ misc_feature order(2000209..2000211,2000251..2000256,2000260..2000265,
+ 2000272..2000274)
+ /locus_tag="SARI_02068"
+ /note="putative dimer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:239345"
+ misc_feature 2000323..2000652
+ /locus_tag="SARI_02068"
+ /note="C-terminal, alpha helical domain of an unknown
+ subfamily 2 of Glutathione S-transferases; Region:
+ GST_C_2; cd03180"
+ /db_xref="CDD:198289"
+ misc_feature order(2000341..2000343,2000362..2000364,2000536..2000538,
+ 2000545..2000550,2000557..2000559,2000569..2000571)
+ /locus_tag="SARI_02068"
+ /note="putative N-terminal domain interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:198289"
+ misc_feature order(2000341..2000346,2000353..2000358,2000365..2000367,
+ 2000482..2000484)
+ /locus_tag="SARI_02068"
+ /note="putative dimer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:198289"
+ misc_feature order(2000362..2000364,2000374..2000379,2000386..2000391,
+ 2000560..2000562,2000569..2000571)
+ /locus_tag="SARI_02068"
+ /note="putative substrate binding pocket (H-site)
+ [chemical binding]; other site"
+ /db_xref="CDD:198289"
+ gene complement(2000679..2001884)
+ /locus_tag="SARI_02069"
+ CDS complement(2000679..2001884)
+ /locus_tag="SARI_02069"
+ /inference="protein motif:HMMPfam:IPR012938"
+ /inference="protein motif:superfamily:IPR011041"
+ /inference="similar to AA sequence:REFSEQ:YP_151124.1"
+ /note="'KEGG: azo:azo1253 1.2e-78 conserved hypothetical
+ protein K00117;
+ COG: COG2133 Glucose/sorbosone dehydrogenases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571088.1"
+ /db_xref="GI:161503976"
+ /db_xref="InterPro:IPR011041"
+ /db_xref="InterPro:IPR012938"
+ /translation="MFCKNKSTSSDADYALTQSPEGGGMRRILLAVVSFSLFSSWANA
+ NLAPVNVEVLQTRLDHPWSLAFLPDNRGMLITLKGGQLRHWQAGRGLSDPLAGVPKVW
+ ANGQGGLLDVVLAPDFAQSRRVWLSYAEADSEGRASTAVGFGRLSDDLQRLEHFRTVF
+ RQMPKLSTGNHFGGRMVFDAKGALFIALGENNQRATAQDLDKLQGKLVRLTGQGEIPP
+ DNPFVHQAGARPEIWSYGIRNPQGLAINPWSGALWLHEHGPRGGDEINIPEKGKNYGW
+ PLATWGINYSGLKVPEAKGEIVEGTEQPVYYWKDSPAISGMAFYASDVFALWRHKLFI
+ GALKDKEVIVMRVDGNTVTEEGRILGDRKQRIRDVRVGPDGYLYVLTDESDGQLLKVS
+ PSSDTAATR"
+ misc_feature complement(2000739..2001743)
+ /locus_tag="SARI_02069"
+ /note="dehydrogenase, PQQ-dependent, s-GDH family; Region:
+ non_repeat_PQQ; TIGR03606"
+ /db_xref="CDD:234278"
+ misc_feature complement(2000727..2001710)
+ /locus_tag="SARI_02069"
+ /note="Glucose / Sorbosone dehydrogenase; Region: GSDH;
+ pfam07995"
+ /db_xref="CDD:219689"
+ gene complement(2001930..2002313)
+ /gene="bssR"
+ /locus_tag="SARI_02070"
+ CDS complement(2001930..2002313)
+ /gene="bssR"
+ /locus_tag="SARI_02070"
+ /inference="similar to AA sequence:REFSEQ:NP_455387.1"
+ /note="'BssS; regulator of biofilm through signal
+ secretion; disruption of this gene in Escherichia coli led
+ to effects on biofilm formation, alteration in expression
+ of a number of genes and mutations in bssS led to defects
+ in indole transport and autoinducer-2 uptake and
+ processing'"
+ /codon_start=1
+ /transl_table=11
+ /product="biofilm formation regulatory protein BssR"
+ /protein_id="YP_001571089.1"
+ /db_xref="GI:161503977"
+ /translation="MVVDRLRTDLLNKLINARIDLAAYLQLRKAKGYMSVSESEILRD
+ NFFELNRELHDQVLRQGLHLDQEEWNALRRAEGALAAAAVCLMSGHHDCPTFIAVNAD
+ KLENCLTTLTLSIQSLKAHSPLIQV"
+ misc_feature complement(2001933..2002313)
+ /gene="bssR"
+ /locus_tag="SARI_02070"
+ /note="biofilm formation regulatory protein BssR;
+ Reviewed; Region: bssR; PRK12302"
+ /db_xref="CDD:183420"
+ gene complement(2002383..2002517)
+ /locus_tag="SARI_02071"
+ CDS complement(2002383..2002517)
+ /locus_tag="SARI_02071"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571090.1"
+ /db_xref="GI:161503978"
+ /translation="MVRAGILQISGQKLYRNLIGSGGINLCCYQRKVKKVNAKKILDL
+ "
+ gene 2002544..2003869
+ /gene="rimO"
+ /locus_tag="SARI_02072"
+ CDS 2002544..2003869
+ /gene="rimO"
+ /locus_tag="SARI_02072"
+ /inference="protein motif:HMMPanther:IPR005839"
+ /inference="protein motif:HMMPfam:IPR002792"
+ /inference="protein motif:HMMPfam:IPR007197"
+ /inference="protein motif:HMMPfam:IPR013848"
+ /inference="protein motif:HMMSmart:IPR006638"
+ /inference="protein motif:HMMTigr:IPR005839"
+ /inference="protein motif:HMMTigr:IPR005840"
+ /inference="protein motif:ScanRegExp:IPR005839"
+ /inference="similar to AA sequence:INSD:AAL19788.1"
+ /note="catalyzes the methylthiolation of an aspartic acid
+ residue of the S12 protein of the 30S ribosomal subunit"
+ /codon_start=1
+ /transl_table=11
+ /product="ribosomal protein S12 methylthiotransferase"
+ /protein_id="YP_001571091.1"
+ /db_xref="GI:161503979"
+ /db_xref="InterPro:IPR002792"
+ /db_xref="InterPro:IPR005839"
+ /db_xref="InterPro:IPR005840"
+ /db_xref="InterPro:IPR006638"
+ /db_xref="InterPro:IPR007197"
+ /db_xref="InterPro:IPR013848"
+ /translation="MSNVTHQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPRYDD
+ ADMVIVNTCGFIDSAVQESLEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITG
+ PHSYEQVLQHVHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIP
+ SMRGDLVSRPIGDVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTS
+ MASLCEQLSKLGVWTRLHYVYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMK
+ RPGSVDRQLARIKQWRDICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCF
+ KYSPVEGAGANELPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIVDEVDE
+ EGAIGRSMADAPEIDGAVYLNGETNVKPGDIVRVKVENADEYDLWGSRV"
+ misc_feature 2002544..2003866
+ /gene="rimO"
+ /locus_tag="SARI_02072"
+ /note="ribosomal protein S12 methylthiotransferase;
+ Provisional; Region: rimO; PRK14862"
+ /db_xref="CDD:237838"
+ misc_feature 2002568..2002834
+ /gene="rimO"
+ /locus_tag="SARI_02072"
+ /note="Uncharacterized protein family UPF0004; Region:
+ UPF0004; pfam00919"
+ /db_xref="CDD:216191"
+ misc_feature 2002973..2003605
+ /gene="rimO"
+ /locus_tag="SARI_02072"
+ /note="Radical SAM superfamily. Enzymes of this family
+ generate radicals by combining a 4Fe-4S cluster and
+ S-adenosylmethionine (SAM) in close proximity. They are
+ characterized by a conserved CxxxCxxC motif, which
+ coordinates the conserved iron-sulfur cluster; Region:
+ Radical_SAM; cd01335"
+ /db_xref="CDD:100105"
+ misc_feature order(2002991..2002993,2002997..2002999,2003003..2003005,
+ 2003009..2003017,2003117..2003119,2003123..2003128,
+ 2003249..2003257,2003330..2003332,2003456..2003458,
+ 2003546..2003551)
+ /gene="rimO"
+ /locus_tag="SARI_02072"
+ /note="FeS/SAM binding site; other site"
+ /db_xref="CDD:100105"
+ gene complement(2003984..2004895)
+ /locus_tag="SARI_02073"
+ CDS complement(2003984..2004895)
+ /locus_tag="SARI_02073"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="similar to AA sequence:INSD:CAD05297.1"
+ /note="'KEGG: rha:RHA1_ro09047 1.4e-07 ABC peptide
+ transporter, permease component K02033;
+ COG: COG1173 ABC-type dipeptide/oligopeptide/nickel
+ transport systems, permease components;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571092.1"
+ /db_xref="GI:161503980"
+ /db_xref="InterPro:IPR000515"
+ /translation="MRLFNWRRQAILNAMPVVKPEQIRTTWREFWRRFHHQHVALVAG
+ GFVLALIMVAIFARWLTPYDAENYFDYDSLNNGPSLQHWFGVDSLGRDIFSRVLVGTQ
+ ISLAAGVLAVLIGAIVGTVLGLLAGYYEGWWDRFIMRICDVLFAFPGILLAIAVVAVL
+ GSGIANVIVAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGARDATILFSHILPGT
+ VSSIVVFFTMRIGTSIISAASLSFLGLGAQPPTPEWGAMLNEARADMVIAPHVALFPA
+ VAIFLTVLAFNLLGDGLRDALDPKIKG"
+ misc_feature complement(2003987..2004889)
+ /locus_tag="SARI_02073"
+ /note="glutathione ABC transporter permease GsiD;
+ Provisional; Region: PRK15082"
+ /db_xref="CDD:185040"
+ misc_feature complement(2004659..2004829)
+ /locus_tag="SARI_02073"
+ /note="N-terminal TM domain of oligopeptide transport
+ permease C; Region: OppC_N; pfam12911"
+ /db_xref="CDD:221848"
+ misc_feature complement(2004017..2004538)
+ /locus_tag="SARI_02073"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(2004017..2004022,2004029..2004034,
+ 2004041..2004046,2004050..2004055,2004062..2004067,
+ 2004125..2004130,2004170..2004175,2004182..2004193,
+ 2004212..2004214,2004221..2004226,2004266..2004268,
+ 2004317..2004319,2004326..2004331,2004341..2004343,
+ 2004347..2004352,2004359..2004361,2004365..2004367,
+ 2004371..2004376,2004425..2004427,2004431..2004436,
+ 2004443..2004472,2004476..2004487,2004515..2004517,
+ 2004530..2004535))
+ /locus_tag="SARI_02073"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(2004176..2004193,2004425..2004469))
+ /locus_tag="SARI_02073"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(2004065..2004067,2004125..2004127,
+ 2004134..2004136,2004173..2004175,2004389..2004391,
+ 2004425..2004427))
+ /locus_tag="SARI_02073"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(2004245..2004247,2004257..2004262,
+ 2004278..2004316))
+ /locus_tag="SARI_02073"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene complement(2004898..2005818)
+ /locus_tag="SARI_02074"
+ CDS complement(2004898..2005818)
+ /locus_tag="SARI_02074"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="similar to AA sequence:SwissProt:Q57RB0"
+ /note="'KEGG: rha:RHA1_ro09047 5.5e-44 ABC peptide
+ transporter, permease component K02033;
+ COG: COG0601 ABC-type dipeptide/oligopeptide/nickel
+ transport systems, permease components;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571093.1"
+ /db_xref="GI:161503981"
+ /db_xref="InterPro:IPR000515"
+ /translation="MLNYILKRLLGLIPTLLIVAVLVFLFVHLLPGDPARLIAGPEAD
+ AQVIALVRQQLGLDQPLHVQFWHYITHVLQGDFGTSMVSRRPVSEEIASRFLPTLWLT
+ ITSMIWAVLFGMAAGIAAAVWRNRWPDRVGMTLAVTGISFPAFALGMLLMQIFSVELG
+ WLPTVGADSWQHYILPSLTLGAAVASVMARFTRSSFVDVLSEDYMRTARAKGVSETWV
+ VLKHGLRNAMIPVVTMMGLQFGFLLGGSIIVEKVFNWPGLGRLLVDSVEMRDYPVIQA
+ EVLLFSLEFILINLVVDVLYAAINPAIRYK"
+ misc_feature complement(2004901..2005818)
+ /locus_tag="SARI_02074"
+ /note="glutathione ABC transporter permease GsiC;
+ Provisional; Region: PRK15081"
+ /db_xref="CDD:185039"
+ misc_feature complement(2004970..2005536)
+ /locus_tag="SARI_02074"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(2004970..2004975,2004982..2004987,
+ 2004991..2004996,2005003..2005008,2005036..2005041,
+ 2005066..2005071,2005078..2005089,2005108..2005110,
+ 2005117..2005122,2005162..2005164,2005213..2005215,
+ 2005222..2005227,2005237..2005239,2005243..2005248,
+ 2005255..2005257,2005261..2005263,2005267..2005272,
+ 2005363..2005365,2005369..2005374,2005381..2005410,
+ 2005414..2005425,2005456..2005458,2005471..2005476,
+ 2005483..2005488))
+ /locus_tag="SARI_02074"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(2005072..2005089,2005363..2005407))
+ /locus_tag="SARI_02074"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(2005006..2005008,2005036..2005038,
+ 2005045..2005047,2005069..2005071,2005285..2005287,
+ 2005363..2005365))
+ /locus_tag="SARI_02074"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(2005141..2005143,2005153..2005158,
+ 2005174..2005212))
+ /locus_tag="SARI_02074"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene complement(2005879..2007417)
+ /locus_tag="SARI_02075"
+ CDS complement(2005879..2007417)
+ /locus_tag="SARI_02075"
+ /inference="protein motif:HMMPfam:IPR000914"
+ /inference="similar to AA sequence:INSD:AAO69652.1"
+ /note="'KEGG: shn:Shewana3_2650 2.6e-34 acetate kinase
+ K00925;
+ COG: COG0747 ABC-type dipeptide transport system,
+ periplasmic component;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="ABC transporter periplasmic-binding protein"
+ /protein_id="YP_001571094.1"
+ /db_xref="GI:161503982"
+ /db_xref="InterPro:IPR000914"
+ /translation="MTQFITHKWLAALGLASFIAAFPALAAKDVVVAVGSNFTTLDPY
+ DANDTLSQAVAKSFYQGLFGLDKDMKVKNVLAEGYTVSDDGLTYTITLRQGVKFQDGA
+ DFDAAAVKANLDRASNPDNHLKRYNLYKNIAKTEVVDPATVKITLKQPFSAFINILAH
+ PATAMISPQALEKYGKDIGFHPVGTGPYQLETWNQTDFVKVKKFAGYWQQGLPKLDSI
+ TWRPVTDNNTRAAMLQTGEAQFAFPIPYEQAALLAKNKNLELVASPSIMQRYISMNVT
+ QKPFDNPKVREALNHAINRQALVKVAFAGYATPATGVAPPSIAYAQSYQPWPYDPAEA
+ RELLKEAGYPDGFSTTLWSSHNHSTAQKVLQFTQQQLAQIGIKARITAMDAGQRAAEV
+ EGKGQKESGVRMFYTGWSASTGEADWALSPLFASQNWPPTQFNTAFYSNKQVDSDLAA
+ ALKTNVPQEKTRLYKEAQDIIWKESPWIPLVVEKLVSAHSKNLTGFWIMPDTGFSFDD
+ ADLK"
+ misc_feature complement(2005882..2007417)
+ /locus_tag="SARI_02075"
+ /note="glutathione ABC transporter substrate-binding
+ protein GsiB; Provisional; Region: PRK15413"
+ /db_xref="CDD:185311"
+ misc_feature complement(2005894..2007333)
+ /locus_tag="SARI_02075"
+ /note="The substrate-binding component of an
+ uncharacterized ABC-type peptide import system Ylib
+ contains the type 2 periplasmic binding fold; Region:
+ PBP2_Ylib_like; cd08499"
+ /db_xref="CDD:173864"
+ gene complement(2007450..2009321)
+ /locus_tag="SARI_02076"
+ CDS complement(2007450..2009321)
+ /locus_tag="SARI_02076"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMPfam:IPR013563"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /note="with GsiBCD is involved in glutathione import; GsiA
+ contains 2 ATP-binding domains"
+ /codon_start=1
+ /transl_table=11
+ /product="glutathione transporter ATP-binding protein"
+ /protein_id="YP_001571095.1"
+ /db_xref="GI:161503983"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR013563"
+ /translation="MPHSDELDSRDVLSVRGLNIAFHHEEQQVDAVRNLSLCLKRGET
+ LAIVGESGSGKSVTALALMRLIEQADANVRCGEMLLRRRNRQVIELSEQSDAQMRRVR
+ GADIAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASHEEALAEAKRMLDQVRIPEPQA
+ ILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQQEM
+ SMGVIFITHDMGVVADIADRVLVMYQGEAMETGSVEQIFHAPTHPYTQTLLAAVPQLG
+ AMRGHSLPRRFPLISADEPAPYESQIEQDTVVEGEPILQVRGLVTRFPLRSGLFNRVT
+ REVHAVENISFDLWPGETLSLVGESGSGKSTTGRALLRLVESRQGEIIFNGQRIDTLS
+ AGKLQPLRRDIQCIFQDPYASLDPRQTVGYSIMEPLRIHGLGQGDAAAKRVAWLLERV
+ GLRPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSVRGQIINLLLD
+ LQREMGIAYLFISHDMAVVERISHRVAVMYLGRIVEMGTRRAVFENPQHPYTRKLMAA
+ VPVADPFRHRPRRVLLSDDIPSNIHKRGEETPAVSLQLVGPGHYVARPLQDNALSRL"
+ misc_feature complement(2007453..2009321)
+ /locus_tag="SARI_02076"
+ /note="glutathione transporter ATP-binding protein;
+ Provisional; Region: PRK10261"
+ /db_xref="CDD:182342"
+ misc_feature complement(2008569..2009288)
+ /locus_tag="SARI_02076"
+ /note="ATP-binding cassette domain of nickel/oligopeptides
+ specific transporters; Region: ABC_NikE_OppD_transporters;
+ cd03257"
+ /db_xref="CDD:213224"
+ misc_feature complement(2009154..2009177)
+ /locus_tag="SARI_02076"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(order(2008641..2008643,2008740..2008745,
+ 2008989..2008991,2009151..2009159,2009163..2009168))
+ /locus_tag="SARI_02076"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(2008989..2009000)
+ /locus_tag="SARI_02076"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(2008788..2008817)
+ /locus_tag="SARI_02076"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(2008740..2008757)
+ /locus_tag="SARI_02076"
+ /note="Walker B; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(2008722..2008733)
+ /locus_tag="SARI_02076"
+ /note="D-loop; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(2008635..2008655)
+ /locus_tag="SARI_02076"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(<2008452..2008580)
+ /locus_tag="SARI_02076"
+ /note="Oligopeptide/dipeptide transporter, C-terminal
+ region; Region: oligo_HPY; cl07097"
+ /db_xref="CDD:244611"
+ misc_feature complement(2007684..2008385)
+ /locus_tag="SARI_02076"
+ /note="ATP-binding cassette domain of nickel/oligopeptides
+ specific transporters; Region: ABC_NikE_OppD_transporters;
+ cd03257"
+ /db_xref="CDD:213224"
+ misc_feature complement(2008230..2008253)
+ /locus_tag="SARI_02076"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(order(2007756..2007758,2007855..2007860,
+ 2008098..2008100,2008227..2008235,2008239..2008244))
+ /locus_tag="SARI_02076"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(2008098..2008109)
+ /locus_tag="SARI_02076"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(2007903..2007932)
+ /locus_tag="SARI_02076"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(2007855..2007872)
+ /locus_tag="SARI_02076"
+ /note="Walker B; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(2007837..2007848)
+ /locus_tag="SARI_02076"
+ /note="D-loop; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(2007750..2007770)
+ /locus_tag="SARI_02076"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213224"
+ misc_feature complement(<2007558..2007695)
+ /locus_tag="SARI_02076"
+ /note="Oligopeptide/dipeptide transporter, C-terminal
+ region; Region: oligo_HPY; pfam08352"
+ /db_xref="CDD:219806"
+ gene 2009565..2010806
+ /locus_tag="SARI_02077"
+ CDS 2009565..2010806
+ /locus_tag="SARI_02077"
+ /inference="protein motif:BlastProDom:IPR001453"
+ /inference="protein motif:HMMPfam:IPR001453"
+ /inference="protein motif:HMMPfam:IPR005110"
+ /inference="protein motif:HMMPfam:IPR005111"
+ /inference="protein motif:HMMPIR:IPR012088"
+ /inference="protein motif:HMMTigr:IPR001453"
+ /inference="protein motif:ScanRegExp:IPR008284"
+ /inference="protein motif:superfamily:IPR001453"
+ /inference="similar to AA sequence:INSD:AAL19782.1"
+ /note="is involved in the formation of active molybdenum
+ cofactor and the chelation of molybdenum"
+ /codon_start=1
+ /transl_table=11
+ /product="molybdopterin biosynthesis protein MoeA"
+ /protein_id="YP_001571096.1"
+ /db_xref="GI:161503984"
+ /db_xref="InterPro:IPR001453"
+ /db_xref="InterPro:IPR005110"
+ /db_xref="InterPro:IPR005111"
+ /db_xref="InterPro:IPR008284"
+ /db_xref="InterPro:IPR012088"
+ /translation="MFMEFSAGLMPLETALTQMLSRITPLTAVETLPLVNCFGRILAT
+ DIVSPLDVPGFDNSAMDGYAVRLADLSADKPLPVAGKAFAGQPYQGEWPAGTCIRIMT
+ GAPVPAGCEAVVMQEQTEQTDDGVRFTADVRCGQNIRRRGEDIRQDAVVFPAGTRLTT
+ AELPVLASLGIADAQVVRKVRVALFSTGDELQLPGQPLEAGQIYDTNRLTIHLMLQQL
+ GCEVINLGIIPDDPGKLRAAFIDADSQADVVISSGGVSVGEADYTKTILEELGEIAFW
+ KLAIKPGKPFAFGKLSNSWFCGLPGNPVSAALTFYQLVQPLLAKLGGNTASALPPRQR
+ VRTTSRLKKTPGRLDFQRGILQRSANGELEVTTTGHQGSHIFSSFSLGNCFIVLERER
+ GSVEPGEWVEVEPFNALFGGL"
+ misc_feature 2009571..2010803
+ /locus_tag="SARI_02077"
+ /note="molybdopterin biosynthesis protein MoeA;
+ Provisional; Region: PRK10680"
+ /db_xref="CDD:182643"
+ misc_feature 2009607..2010782
+ /locus_tag="SARI_02077"
+ /note="MoeA family. Members of this family are involved in
+ biosynthesis of the molybdenum cofactor (MoCF), an
+ essential cofactor of a diverse group of redox enzymes.
+ MoCF biosynthesis is an evolutionarily conserved pathway
+ present in eubacteria, archaea and...; Region: MoeA;
+ cd00887"
+ /db_xref="CDD:238452"
+ misc_feature order(2009667..2009669,2009994..2009996,2010039..2010050,
+ 2010054..2010056,2010063..2010068,2010072..2010074,
+ 2010174..2010176,2010180..2010182,2010189..2010191,
+ 2010561..2010563,2010684..2010686,2010768..2010770)
+ /locus_tag="SARI_02077"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238452"
+ misc_feature order(2010123..2010128,2010132..2010134,2010252..2010254,
+ 2010324..2010326)
+ /locus_tag="SARI_02077"
+ /note="putative functional site; other site"
+ /db_xref="CDD:238452"
+ misc_feature order(2010324..2010332,2010462..2010467,2010477..2010479,
+ 2010486..2010488)
+ /locus_tag="SARI_02077"
+ /note="putative MPT binding site; other site"
+ /db_xref="CDD:238452"
+ gene 2010806..2011555
+ /locus_tag="SARI_02078"
+ CDS 2010806..2011555
+ /locus_tag="SARI_02078"
+ /inference="protein motif:HMMPfam:IPR000594"
+ /inference="protein motif:HMMPfam:IPR007901"
+ /inference="protein motif:HMMTigr:IPR012730"
+ /inference="protein motif:superfamily:IPR009036"
+ /inference="similar to AA sequence:REFSEQ:NP_459822.1"
+ /note="'ATP-dependent adenylate transferase, transfers
+ adenyl moiety to the MoeD subunit of molybdopterin
+ synthase'"
+ /codon_start=1
+ /transl_table=11
+ /product="molybdopterin biosynthesis protein MoeB"
+ /protein_id="YP_001571097.1"
+ /db_xref="GI:161503985"
+ /db_xref="InterPro:IPR000594"
+ /db_xref="InterPro:IPR007901"
+ /db_xref="InterPro:IPR009036"
+ /db_xref="InterPro:IPR012730"
+ /translation="MAELSDQEMLRYNRQIILRGFDFEGQEALKDARVLVVGLGGLGC
+ AATQYLAGAGVGQLTLLDFDTVSVSNLQRQTLHSDATVGQPKVESARDALARINPHIT
+ ITPVNARLDDDAMTSLIAGHSLVLDCTDNVSVRNQLNAGCYTAKVPLISGAAIRMEGQ
+ VTAFTYRENEPCYRCLSRLFGENALTCVEAGVMAPLIGVIGSLQAMEAIKLLAHYGQP
+ ASGKIVMYDAMTCQFREMKLMRNPGCEVCGQ"
+ misc_feature 2010806..2011537
+ /locus_tag="SARI_02078"
+ /note="molybdopterin biosynthesis protein MoeB;
+ Provisional; Region: PRK05690"
+ /db_xref="CDD:180204"
+ misc_feature 2010836..2011519
+ /locus_tag="SARI_02078"
+ /note="ThiF_MoeB_HesA. Family of E1-like enzymes involved
+ in molybdopterin and thiamine biosynthesis family. The
+ common reaction mechanism catalyzed by MoeB and ThiF, like
+ other E1 enzymes, begins with a nucleophilic attack of the
+ C-terminal carboxylate of MoaD...; Region:
+ ThiF_MoeB_HesA_family; cd00757"
+ /db_xref="CDD:238386"
+ misc_feature order(2010917..2010919,2010923..2010925,2010929..2010931,
+ 2010989..2010991,2010995..2010997,2011022..2011024,
+ 2011061..2011063,2011187..2011189,2011205..2011207)
+ /locus_tag="SARI_02078"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238386"
+ misc_feature order(2010929..2010931,2011190..2011198,2011208..2011210,
+ 2011262..2011267,2011277..2011279,2011283..2011285,
+ 2011472..2011474,2011484..2011486,2011505..2011507,
+ 2011511..2011516)
+ /locus_tag="SARI_02078"
+ /note="substrate interface [chemical binding]; other site"
+ /db_xref="CDD:238386"
+ gene 2011833..2012732
+ /locus_tag="SARI_02079"
+ CDS 2011833..2012732
+ /locus_tag="SARI_02079"
+ /inference="protein motif:HMMPfam:IPR007197"
+ /inference="protein motif:HMMPIR:IPR011352"
+ /inference="protein motif:HMMTigr:IPR012839"
+ /inference="protein motif:ScanRegExp:IPR001989"
+ /inference="similar to AA sequence:REFSEQ:NP_459821.1"
+ /note="'KEGG: stm:STM0844 1.1e-162 pflE; putative pyruvate
+ formate lyase activating enzyme K04069;
+ COG: COG1180 Pyruvate-formate lyase-activating enzyme;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571098.1"
+ /db_xref="GI:161503986"
+ /db_xref="InterPro:IPR001989"
+ /db_xref="InterPro:IPR007197"
+ /db_xref="InterPro:IPR011352"
+ /db_xref="InterPro:IPR012839"
+ /translation="MIFNIQRYSTHDGPGIRTVVFLKGCSLGCRWCQNPESRARAQDL
+ LYDARLCLEGCDLCAQAAPDVIERALNGLLIHRETLTDAHFSILAHCCPTQALTVCGE
+ IKSVDEIMATVLRDKPFYDRSGGGLTLSGGEPFMQPELAAELFKASHDAGIHTAVETC
+ LHVPWKYIAPSLPYIDLFLADLKHVANGPFKQWTDGSASRVLENLRKLAAAGKKMVIR
+ VPLIQGFNADEEAIKAITDFAADELHVGEIHFLPYHTLGINKYHLLSQPYHAPDKPLD
+ APALLDFAQKYACQKGLTATLRG"
+ misc_feature 2011836..2012708
+ /locus_tag="SARI_02079"
+ /note="glycyl-radical enzyme activating protein family;
+ Region: PFLE_PFLC; TIGR02494"
+ /db_xref="CDD:233895"
+ misc_feature 2012100..2012603
+ /locus_tag="SARI_02079"
+ /note="Radical SAM superfamily. Enzymes of this family
+ generate radicals by combining a 4Fe-4S cluster and
+ S-adenosylmethionine (SAM) in close proximity. They are
+ characterized by a conserved CxxxCxxC motif, which
+ coordinates the conserved iron-sulfur cluster; Region:
+ Radical_SAM; cd01335"
+ /db_xref="CDD:100105"
+ misc_feature order(2012103..2012105,2012106..2012111,2012220..2012222,
+ 2012226..2012231,2012304..2012312,2012367..2012369,
+ 2012493..2012495,2012586..2012591)
+ /locus_tag="SARI_02079"
+ /note="FeS/SAM binding site; other site"
+ /db_xref="CDD:100105"
+ gene 2012738..2015170
+ /locus_tag="SARI_02080"
+ CDS 2012738..2015170
+ /locus_tag="SARI_02080"
+ /inference="protein motif:HMMPfam:IPR001150"
+ /inference="protein motif:HMMPfam:IPR004184"
+ /inference="protein motif:HMMTigr:IPR010098"
+ /inference="protein motif:ScanRegExp:IPR001150"
+ /note="'KEGG: sec:SC0838 0. pflF; putative pyruvate
+ formate lyase K00656;
+ COG: COG1882 Pyruvate-formate lyase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571099.1"
+ /db_xref="GI:161503987"
+ /db_xref="InterPro:IPR001150"
+ /db_xref="InterPro:IPR004184"
+ /db_xref="InterPro:IPR010098"
+ /translation="MTQLKLDTLSDRIKAHKTALVHIVKPPVCTERAQHYTEMYQQHL
+ DKPIPVRRALALAHHLAERTIWIKHDELIVGNQASEVRAAPIFPEYTVSWIEKEIDDL
+ ADRPGAGFSVSEENKRILHDVCPWWRGQTVQDRCYGMFTDEQKGLLATGIIKAEGNMT
+ SGDAHLAVNFPLLLEKGLDGLRDKVAERRSRINLTVLEDLHGGQFLKAIDIVLDAVSQ
+ HITRFAALARQMAGEETRESRRKELLTIAENCEVIAHQPPQTFWQALQLCYFIQLILQ
+ IESNGHSVSFGRMDQYLYPYYRRDVELNQTLDREHAIELLHCCWLKLLEVNKIRSGSH
+ SKASAGSPLYQNVTIGGQNLINGQPMDAVNPLSYAILESCGRLRSTQPNLSVRYHAGM
+ SNDFLDACVQVIRCGFGMPAFNNDEIVIPEFIKLGIEPQDAYDYAAIGCIETAVGGKW
+ GYRCTGMSFINFARVMLAALEGGRDATSGKVFLPQEKALSAGNFNNFDDVMAAWDTQI
+ RYYTRKSIEIEYVVDTMLEENVHDILCSALVDDCIERAKSIKQGGAKYDWVSGLQVGI
+ ANLGNSLAAVKKLVFEQGVIGQQQLAAALADDFDGLTHEQLRQRLINGAPKYGNDDDS
+ VDTLLARAYQTYIDELKQYHNPRYGRGPVGGNYYAGTSSISANVPFGAATMATPDGRK
+ AHTPLAEGASPASGTDHLGPTAVIGSVGKLPTGSILGGVLLNQKLNPTTLENESDKQK
+ LMVLLRTFFEVHKGWHIQYNIVSRETLLDAKKHPDQYRDLVVRVAGYSAFFTALSPDA
+ QDDIIARTEHML"
+ misc_feature 2012759..2015167
+ /locus_tag="SARI_02080"
+ /note="glycyl radical enzyme, PFL2/glycerol dehydratase
+ family; Region: PFL2-3; TIGR01774"
+ /db_xref="CDD:233568"
+ misc_feature 2012765..2015158
+ /locus_tag="SARI_02080"
+ /note="Pyruvate formate lyase 2 and related enzymes;
+ Region: PFL2_DhaB_BssA; cd01677"
+ /db_xref="CDD:153086"
+ misc_feature order(2012867..2012878,2013119..2013127,2013137..2013142,
+ 2013149..2013160,2013335..2013340,2013344..2013349,
+ 2014295..2014297,2014307..2014309,2014322..2014324,
+ 2014661..2014669,2014673..2014675)
+ /locus_tag="SARI_02080"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:153086"
+ misc_feature order(2013230..2013232,2013581..2013586,2013749..2013751,
+ 2013767..2013769,2014055..2014060,2014064..2014066,
+ 2014103..2014105,2014721..2014723,2014727..2014729)
+ /locus_tag="SARI_02080"
+ /note="active site"
+ /db_xref="CDD:153086"
+ misc_feature 2015084..2015098
+ /locus_tag="SARI_02080"
+ /note="glycine loop; other site"
+ /db_xref="CDD:153086"
+ gene complement(2015248..2016093)
+ /locus_tag="SARI_02081"
+ CDS complement(2015248..2016093)
+ /locus_tag="SARI_02081"
+ /inference="protein motif:HMMPfam:IPR013200"
+ /inference="protein motif:HMMTigr:IPR000150"
+ /inference="protein motif:HMMTigr:IPR006379"
+ /inference="protein motif:ScanRegExp:IPR000150"
+ /inference="similar to AA sequence:REFSEQ:NP_455376.1"
+ /note="'KEGG: stm:STM0842 7.7e-141 ybiV(1); putative
+ hydrolase of the HAD superfamily K07757;
+ COG: COG0561 Predicted hydrolases of the HAD superfamily;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571100.1"
+ /db_xref="GI:161503988"
+ /db_xref="InterPro:IPR000150"
+ /db_xref="InterPro:IPR006379"
+ /db_xref="InterPro:IPR013200"
+ /translation="MFLVAVTARSLSMTVNVVVTDMDGTFLDDAKQYDRVRFMAQYQE
+ MKKRNIEFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGNQLFHGELTRHESR
+ IVIGELLKDKQLNFVACGLKSAYVSENAPDTFVALMAKHYHRLQPVKDYHDIDDILFK
+ FSLNLPDEQIPLVIDKLHISLDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWNRS
+ PQNVVAIGDSGNDAEMLKMAHYSFAMGNAADNIKALSRYHTDDNNHQGALNVIQAVLD
+ GTDPF"
+ misc_feature complement(2015281..2016045)
+ /locus_tag="SARI_02081"
+ /note="Cof subfamily of IIB subfamily of haloacid
+ dehalogenase superfamily; Region: Cof-subfamily;
+ TIGR00099"
+ /db_xref="CDD:232824"
+ misc_feature complement(<2015812..2016045)
+ /locus_tag="SARI_02081"
+ /note="Haloacid dehalogenase-like hydrolases. The haloacid
+ dehalogenase-like (HAD) superfamily includes L-2-haloacid
+ dehalogenase, epoxide hydrolase, phosphoserine
+ phosphatase, phosphomannomutase, phosphoglycolate
+ phosphatase, P-type ATPase, and many others; Region:
+ HAD_like; cd01427"
+ /db_xref="CDD:119389"
+ misc_feature complement(order(2015923..2015928,2016025..2016033))
+ /locus_tag="SARI_02081"
+ /note="active site"
+ /db_xref="CDD:119389"
+ misc_feature complement(2016016..2016033)
+ /locus_tag="SARI_02081"
+ /note="motif I; other site"
+ /db_xref="CDD:119389"
+ misc_feature complement(2015926..2015928)
+ /locus_tag="SARI_02081"
+ /note="motif II; other site"
+ /db_xref="CDD:119389"
+ misc_feature complement(2015362..>2015523)
+ /locus_tag="SARI_02081"
+ /note="Haloacid dehalogenase-like hydrolases. The haloacid
+ dehalogenase-like (HAD) superfamily includes L-2-haloacid
+ dehalogenase, epoxide hydrolase, phosphoserine
+ phosphatase, phosphomannomutase, phosphoglycolate
+ phosphatase, P-type ATPase, and many others; Region:
+ HAD_like; cd01427"
+ /db_xref="CDD:119389"
+ gene 2016320..2017585
+ /locus_tag="SARI_02082"
+ CDS 2016320..2017585
+ /locus_tag="SARI_02082"
+ /inference="protein motif:HMMPfam:IPR010856"
+ /inference="similar to AA sequence:PDB:2CSG"
+ /note="'COG: NOG06762 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571101.1"
+ /db_xref="GI:161503989"
+ /db_xref="InterPro:IPR010856"
+ /translation="MTITFTHETLPPDPKAAIRQMKQALRAQIGDVQAVFDRLSATIE
+ ARVAEINDLKAQGQPVWPIIPFSELAMGNISDAARAEVKRRGCAVIKGHFPREQALAW
+ DQSMLDYLDKNHFDEVYKGPGDNFFGTLSASRPEIYPVYWSQAQMQARQSEEMALAQS
+ FLNRLWQVERDGKRWFNPDISIIYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPAYQ
+ QVFASVFNGNVEQYDPWNAAHRTEVEEYTVDNTTKCSVFRTFQGWTALSDMLPGQGLL
+ HVVPIPEAMAYILLRPLLDDVPEDELCGVAPGRVLPVSERWHPLLMAALTSIPPLEAG
+ DSVWWHCDVIHSVAPVENQQGWGNVMYIPAAPLCEKNLAYARKVKTALETGASPGDFP
+ REDYETTWEGRFTLHDLNIHGKRALGMDI"
+ misc_feature 2016353..2017576
+ /locus_tag="SARI_02082"
+ /note="Protein of unknown function (DUF1479); Region:
+ DUF1479; pfam07350"
+ /db_xref="CDD:219384"
+ gene complement(2017582..2018655)
+ /locus_tag="SARI_02083"
+ CDS complement(2017582..2018655)
+ /locus_tag="SARI_02083"
+ /inference="protein motif:HMMPfam:IPR000843"
+ /inference="protein motif:HMMPfam:IPR001761"
+ /inference="protein motif:superfamily:IPR010982"
+ /inference="similar to AA sequence:INSD:AAZ87549.1"
+ /note="'COG: COG1609 Transcriptional regulators;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571102.1"
+ /db_xref="GI:161503990"
+ /db_xref="InterPro:IPR000843"
+ /db_xref="InterPro:IPR001761"
+ /db_xref="InterPro:IPR010982"
+ /translation="MEKKLKIAEIAARTGLSSSTVSRVLAGKSNTSVHARKEVLTCAR
+ ELGVMEGMAAGRLLLNNLLVFAPPRAFDERLDIFYYRVIQSISKALAPHEVRLRYCAL
+ EENDSDPALFLARMNDAETQAAILIGIDDPHIHDLAADLAKPCVLINCRDDRMRLPLI
+ APDHRLIGAFAARYLFEMGHREVMNVMCLRRYTMEQRLAGIKESWRQYNLDFLDERDL
+ LSISNFSAKETEDKIGAWLDVADGRRLPTALLVGGDFMAAGAINALRLRGLRVPQDVS
+ IMSIDAFNLAAIEDVPLTAVHVPRDELGVEAVQMLQQRLIRPHAPIGSLLLHGRLVVR
+ ESVRRVRPGKGHTVVTDEGLYDS"
+ misc_feature complement(2017675..2018640)
+ /locus_tag="SARI_02083"
+ /note="Transcriptional regulators [Transcription]; Region:
+ PurR; COG1609"
+ /db_xref="CDD:224525"
+ misc_feature complement(<2018515..2018634)
+ /locus_tag="SARI_02083"
+ /note="Helix-turn-helix (HTH) DNA binding domain of the
+ LacI family of transcriptional regulators; Region:
+ HTH_LacI; cd01392"
+ /db_xref="CDD:143331"
+ misc_feature complement(order(2018551..2018553,2018560..2018565,
+ 2018578..2018580,2018587..2018592,2018596..2018610,
+ 2018632..2018634))
+ /locus_tag="SARI_02083"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:143331"
+ misc_feature complement(2017675..2018424)
+ /locus_tag="SARI_02083"
+ /note="Ligand binding domain of the LacI tanscriptional
+ regulator family belonging to the type I
+ periplasmic-binding fold protein superfamily; Region:
+ PBP1_LacI_sugar_binding_like; cd06267"
+ /db_xref="CDD:107262"
+ misc_feature complement(order(2017762..2017764,2017813..2017815,
+ 2017984..2017986,2018065..2018067,2018170..2018172,
+ 2018209..2018211,2018275..2018277,2018410..2018412,
+ 2018419..2018424))
+ /locus_tag="SARI_02083"
+ /note="ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:107262"
+ misc_feature complement(order(2017858..2017863,2017870..2017872,
+ 2017882..2017884,2017975..2017977,2018296..2018304,
+ 2018311..2018313,2018320..2018322,2018353..2018355,
+ 2018359..2018373,2018392..2018397,2018401..2018406,
+ 2018413..2018421))
+ /locus_tag="SARI_02083"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:107262"
+ gene 2018954..2020255
+ /locus_tag="SARI_02084"
+ CDS 2018954..2020255
+ /locus_tag="SARI_02084"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="similar to AA sequence:INSD:AAZ87548.1"
+ /note="'KEGG: dre:30298 0.0026 jak2b; Janus kinase 2b
+ K04447;
+ COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571103.1"
+ /db_xref="GI:161503991"
+ /db_xref="InterPro:IPR011701"
+ /translation="MSLGINNDMAANKPRRVVKNLRWWMLILFLLGVTVNYITRNSLG
+ ILAPELKSSLGITTEQYSWIVGAFQLAYTLFQPLCGWLIDVIGLKLGFMICAGLWALA
+ CLLHAGAGSWLQLAILRFFMGGAEAATTPANAKTIGEWFPKSERPIASGWAGVGFSIG
+ AMLAPPIIYVAHASFGWQGAFMFTGVLAMLWAVLWWIFYNTPDNHPNLSQSELDYIHQ
+ DKEAPAIKLPFLTALKTVARNKRFYGIAIPAFMAEPAWAVLSFWVPLYLSKELGMDLK
+ QIAMFAWLPFLAADLGSVASGYLTRLYTRIFGCTRINSVIASSVTGAFLMISLAIVAF
+ TKSPYITIILISIGGFGHQIISCMLSALVVESFDKGQMATVNGMRGSAAWIASFLFSL
+ IIGVTADKIGFNPLFIAMGFFDLIGAFFLVTFIAERRAQRA"
+ misc_feature 2019029..2020228
+ /locus_tag="SARI_02084"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature 2019044..2020228
+ /locus_tag="SARI_02084"
+ /note="D-galactonate transporter; Region: 2A0114;
+ TIGR00893"
+ /db_xref="CDD:233174"
+ misc_feature order(2019071..2019073,2019080..2019088,2019092..2019097,
+ 2019146..2019148,2019155..2019160,2019167..2019169,
+ 2019179..2019184,2019188..2019193,2019329..2019334,
+ 2019341..2019346,2019353..2019358,2019365..2019367,
+ 2019401..2019406,2019413..2019418,2019434..2019436,
+ 2019710..2019712,2019719..2019724,2019731..2019736,
+ 2019743..2019745,2019785..2019787,2019797..2019799,
+ 2019809..2019811,2019818..2019820,2019830..2019832,
+ 2019998..2020000,2020007..2020012,2020019..2020021,
+ 2020031..2020036,2020043..2020045,2020076..2020081,
+ 2020088..2020093,2020100..2020105,2020112..2020114)
+ /locus_tag="SARI_02084"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ unsure 2019966..2019977
+ /locus_tag="SARI_02084"
+ /note="Sequence derived from one plasmid subclone"
+ gene 2020270..2022633
+ /locus_tag="SARI_02085"
+ CDS 2020270..2022633
+ /locus_tag="SARI_02085"
+ /inference="protein motif:HMMPfam:IPR000322"
+ /note="'KEGG: ssn:SSO_0800 0. putative glucosidase
+ K01187;
+ COG: COG1501 Alpha-glucosidases, family 31 of glycosyl
+ hydrolases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571104.1"
+ /db_xref="GI:161503992"
+ /db_xref="InterPro:IPR000322"
+ /translation="MKTLKNWILQKQLPHHVELLVDGQHTLCLYVLEENLFRVLIKRK
+ GELALDRTWSIAPAQDVPWEGRKREDLSGFTLPVWTLRQQDGTLIVATESLRATVHQP
+ LWIEWQYRNNEGKWQPLVNDRTTSAYLLNAHGDGVAHYQHRRKDERFYGLGDKAGDLQ
+ RTGKRYEMRNLDAMGYNAVSTDPLYKHIPFTITRRDDVSFGLFYDNLSSCWLDLGNEI
+ DNYHAAYRRWQAEAGDIDYYLFTGERVLDVTKAFVRLTGKTLFGPKWSLGYSGSTMHY
+ TDAPDAQNQLMNFIRLCDEHAIPCDAFQLSSGYTSINGKRYVFNWNYDKVPQPKVMSQ
+ AFHDAGLHLAANIKPCLLQDHPRYHEVAEQGLFIRDSENDTPERSSFWDDEGSNLDFT
+ NPQTVAWWQNGVTTQLLEMGIDATWNDNNEFEVWDGEARCHGFGNEIAIKHIRPVMPL
+ LMIRASMEAQQRFAPTKRPYLISRSGCAGMQRYVQTWSGDNRTSWDTLRYNIRIGLGM
+ SLSGLYNLGHDVGGFSGDKPDPELFVRWVQNGVMHPRFTIHSWNDDHTVNEPWMYPGV
+ TPAIRSAIELRYRLLPYFYTLLWLAHTDDEPMLRPTFLDHEHDAQTFEECDDFLLGRD
+ ILVASVVVPGERQRRLWLPDNQTGWYDFYTGAWFSGGQWIIVDAPLEKLPLLVRAGAG
+ LPLSDRISYVNAAKDTSRELKLFPVKGAGVSSGLLFEDDGESWGYQKGHALWLEWEMV
+ CTATTIDLTINARGDYRPAWQTLQVSLPPGEKRKLRVNNEDRSEWAR"
+ misc_feature 2020348..2022603
+ /locus_tag="SARI_02085"
+ /note="Alpha-glucosidases, family 31 of glycosyl
+ hydrolases [Carbohydrate transport and metabolism];
+ Region: COG1501"
+ /db_xref="CDD:224418"
+ misc_feature 2020705..2020908
+ /locus_tag="SARI_02085"
+ /note="Galactose mutarotase-like; Region: Gal_mutarotas_2;
+ pfam13802"
+ /db_xref="CDD:222390"
+ misc_feature 2021038..2021982
+ /locus_tag="SARI_02085"
+ /note="Glycosyl hydrolase family 31 (GH31) domain of a
+ bacterial protein family represented by Escherichia coli
+ protein Aec37. The gene encoding Aec37 (aec-37) is located
+ within a genomic island (AGI-3) isolated from the
+ extraintestinal avian pathogenic...; Region:
+ GH31_glycosidase_Aec37; cd06599"
+ /db_xref="CDD:133130"
+ misc_feature order(2021185..2021187,2021524..2021526,2021689..2021691,
+ 2021728..2021730,2021737..2021739,2021836..2021838,
+ 2021914..2021916)
+ /locus_tag="SARI_02085"
+ /note="putative active site [active]"
+ /db_xref="CDD:133130"
+ misc_feature order(2021524..2021526,2021737..2021739)
+ /locus_tag="SARI_02085"
+ /note="putative catalytic site [active]"
+ /db_xref="CDD:133130"
+ gene complement(2022698..2024269)
+ /locus_tag="SARI_02086"
+ CDS complement(2022698..2024269)
+ /locus_tag="SARI_02086"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="similar to AA sequence:REFSEQ:NP_455374.1"
+ /note="'KEGG: eci:UTI89_C0824 1.3e-273 ybiT; hypothetical
+ ABC transporter ATP-binding protein YbiT K01957;
+ COG: COG0488 ATPase components of ABC transporters with
+ duplicated ATPase domains;
+ Psort location: cytoskeletal, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571105.1"
+ /db_xref="GI:161503993"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLE
+ PTLGNVSLDPNERIGKLRQDQFAFEEFTVLDTVIMGHGELWEVKQERDRIYALPEMSE
+ EDGYKVADLEVKYGEMDGYSAEARAGELLLGVGIPLEQHYGPMSEVAPGWKLRVLLAQ
+ ALFSNPDILLLDEPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHFLNMVCTHMADLD
+ YGELRIYPGNYDEYMTAATQARERLLADNAKKKAQIADLQSFVSRFSANASKSRQATS
+ RARQIDKIKLEEVKASSRQNPFIRFEQDKKLFRNALEVEALTKGFDNGPLFKNVNLLL
+ EVGEKLAVLGTNGVGKSTLLKTLVGDLNADHGTVKWSENARIGYYAQDHEYEFENDLT
+ VFEWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPN
+ ILIMDEPTNHLDMESIESLNMALELYQGTLIFVSHDREFVSSLATRVIEITPERVVDF
+ SGNYEDYLRSKGIES"
+ misc_feature complement(2022704..2024269)
+ /locus_tag="SARI_02086"
+ /note="ABC transporter ATP-binding protein; Provisional;
+ Region: PRK15064"
+ /db_xref="CDD:237894"
+ misc_feature complement(<2024081..2024266)
+ /locus_tag="SARI_02086"
+ /note="ATP-binding cassette domain of elongation factor 3,
+ subfamily F; Region: ABCF_EF-3; cd03221"
+ /db_xref="CDD:213188"
+ misc_feature complement(<2023745..2024203)
+ /locus_tag="SARI_02086"
+ /note="ATP-binding cassette transporter nucleotide-binding
+ domain; Region: ABC_ATPase; cl17201"
+ /db_xref="CDD:247755"
+ misc_feature complement(2024171..2024194)
+ /locus_tag="SARI_02086"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(order(2023751..2023756,2024168..2024176,
+ 2024180..2024185))
+ /locus_tag="SARI_02086"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(order(2023799..2023804,2023835..2023837,
+ 2023847..2023855,2023871..2023882))
+ /locus_tag="SARI_02086"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(2023607..>2023819)
+ /locus_tag="SARI_02086"
+ /note="ATP-binding cassette domain of elongation factor 3,
+ subfamily F; Region: ABCF_EF-3; cd03221"
+ /db_xref="CDD:213188"
+ misc_feature complement(2023751..2023768)
+ /locus_tag="SARI_02086"
+ /note="Walker B; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(2023367..2023627)
+ /locus_tag="SARI_02086"
+ /note="ABC transporter; Region: ABC_tran_2; pfam12848"
+ /db_xref="CDD:221805"
+ misc_feature complement(2022758..2023336)
+ /locus_tag="SARI_02086"
+ /note="ATP-binding cassette domain of elongation factor 3,
+ subfamily F; Region: ABCF_EF-3; cd03221"
+ /db_xref="CDD:213188"
+ gene 2024513..2025433
+ /locus_tag="SARI_02087"
+ CDS 2024513..2025433
+ /locus_tag="SARI_02087"
+ /inference="protein motif:HMMPfam:IPR005490"
+ /inference="similar to AA sequence:INSD:AAL19773.1"
+ /note="'KEGG: eci:UTI89_C2228 2.8e-104 erfK; hypothetical
+ protein K00257;
+ COG: COG1376 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571106.1"
+ /db_xref="GI:161503994"
+ /db_xref="InterPro:IPR005490"
+ /translation="MNMKLTTLFAAAFAVVGFCKTASAVTYPLPTDGSRLIGQNQVIT
+ VPEGNTQPLEYFAAEYQMGLSNMLEANPGVDTFLPKGGTVLNIPQQLILPDTVHEGII
+ INSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE
+ YAAAGEPLPAVVPAGPDNPMGLYALYIGRLYAIHGTNANFGIGLRVSHGCVRLRNDDI
+ KFLFENVPVGTRVQFIDEPVKATTEPDGSRYIEVHNPLSTTEAQFEGKEEVPITLNKS
+ ILAVTNEPDVDQTVVQQAVQDRSGMPVRLN"
+ misc_feature 2024513..2025430
+ /locus_tag="SARI_02087"
+ /note="L,D-transpeptidase; Provisional; Region: PRK10260"
+ /db_xref="CDD:182341"
+ misc_feature 2024813..2025205
+ /locus_tag="SARI_02087"
+ /note="L,D-transpeptidase catalytic domain; Region: YkuD;
+ pfam03734"
+ /db_xref="CDD:217702"
+ unsure 2024787..2024799
+ /locus_tag="SARI_02087"
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(2025488..2026600)
+ /locus_tag="SARI_02088"
+ CDS complement(2025488..2026600)
+ /locus_tag="SARI_02088"
+ /inference="protein motif:HMMPfam:IPR004680"
+ /inference="similar to AA sequence:REFSEQ:YP_151140.1"
+ /note="'COG: COG0471 Di- and tricarboxylate transporters;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571107.1"
+ /db_xref="GI:161503995"
+ /db_xref="InterPro:IPR004680"
+ /translation="MNLAFLRALRRERFFQLLIIVGIALSLFVPFAPRAWPDAIDWHT
+ IITLSGLMLLTKGVELSGYFDVLGRQMTRRFHTQRQLAMFLVLAAAALSTFLTNDVAL
+ FIVVPLTITLKKLCAIPVNRLIIFEALAVNAGSLLTPVGNPQNILLWGRSGLTFAEFS
+ GQMAPLAVMMMLTLLLLCWFCFPGRALQYHTGTRSPQWQPRLVWSCLGLYVVFLTALE
+ LRQELWGLVLVAAGFIVLARRVIISVDWTLLLVFIAMFIDVYLLTQLPALQGVFNQVG
+ ALSHLGLWLTAIGLSQAISNVPSTILLLNYVPASALLAWAVNIGGFGLLPGSLANLIA
+ LRMANDRRIWWRFHFYSLPMLAWAALGGYELLQLVS"
+ misc_feature complement(2025503..2026546)
+ /locus_tag="SARI_02088"
+ /note="Putative anion permease YbiR. Based on sequence
+ similarity, YbiR proteins are predicted to function as
+ anion translocating permeases in eubacteria, archaea and
+ plants. They belong to ArsB/NhaD superfamily of permeases
+ that have been shown to translocate...; Region:
+ YbiR_permease; cd01117"
+ /db_xref="CDD:238537"
+ misc_feature complement(order(2025509..2025547,2025614..2025667,
+ 2025719..2025766,2025815..2025871,2025893..2025937,
+ 2025953..2025991,2026061..2026105,2026169..2026240,
+ 2026250..2026303,2026307..2026357,2026424..2026477,
+ 2026520..2026546))
+ /locus_tag="SARI_02088"
+ /note="transmembrane helices; other site"
+ /db_xref="CDD:238537"
+ misc_feature complement(2025512..2026546)
+ /locus_tag="SARI_02088"
+ /note="Di- and tricarboxylate transporters [Inorganic ion
+ transport and metabolism]; Region: CitT; COG0471"
+ /db_xref="CDD:223547"
+ gene complement(2026597..2027070)
+ /locus_tag="SARI_02089"
+ CDS complement(2026597..2027070)
+ /locus_tag="SARI_02089"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR001367"
+ /inference="protein motif:HMMSmart:IPR001367"
+ /inference="protein motif:superfamily:IPR001367"
+ /inference="similar to AA sequence:INSD:AAV77829.1"
+ /note="Transcriptional regulator that represses the
+ manganese transporter MntH when manganese is present"
+ /codon_start=1
+ /transl_table=11
+ /product="manganese transport regulator MntR"
+ /protein_id="YP_001571108.1"
+ /db_xref="GI:161503996"
+ /db_xref="InterPro:IPR001367"
+ /db_xref="InterPro:IPR011991"
+ /translation="MSRRAGTLTTKKVTQLVNVEEHVEGFRQVREAHRRELIDDYVEL
+ ISDLIIEVGEARQVDMAARLGVSQPTVAKMLKRLASLGFIQMIPWRGVFLTPEGEKLA
+ QESRERHQIVENFLLVLGVSPEIARRDAEGMEHHVSQETLDAFLAFTQQHGTPAE"
+ misc_feature complement(2026609..2027061)
+ /locus_tag="SARI_02089"
+ /note="manganese transport regulator MntR; Provisional;
+ Region: PRK11050"
+ /db_xref="CDD:182927"
+ misc_feature complement(2026795..2026965)
+ /locus_tag="SARI_02089"
+ /note="Iron dependent repressor, N-terminal DNA binding
+ domain; Region: Fe_dep_repress; pfam01325"
+ /db_xref="CDD:110335"
+ misc_feature complement(2026606..2026788)
+ /locus_tag="SARI_02089"
+ /note="Iron dependent repressor, metal binding and
+ dimerisation domain; Region: Fe_dep_repr_C; pfam02742"
+ /db_xref="CDD:202369"
+ unsure 2026684..2026919
+ /note="Sequence derived from one plasmid subclone"
+ gene 2027454..2027621
+ /locus_tag="SARI_02090"
+ CDS 2027454..2027621
+ /locus_tag="SARI_02090"
+ /note="'Psort location: extracellular, including cell
+ wall, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571109.1"
+ /db_xref="GI:161503997"
+ /translation="MVLLFSSQNIFFPAVDLLIRSLYLLAALNILRLAVANPIRFFTH
+ NQASNDPSRQG"
+ gene complement(2027505..2027648)
+ /locus_tag="SARI_02091"
+ CDS complement(2027505..2027648)
+ /locus_tag="SARI_02091"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571110.1"
+ /db_xref="GI:161503998"
+ /translation="MPLLQKRHVLTLARRVITCLIMRKKAYWVRNGESQNIQSCQKIE
+ RAD"
+ gene 2027649..2029229
+ /locus_tag="SARI_02092"
+ CDS 2027649..2029229
+ /locus_tag="SARI_02092"
+ /inference="protein motif:HMMPfam:IPR000917"
+ /inference="similar to AA sequence:REFSEQ:NP_459811.1"
+ /note="'KEGG: eci:UTI89_C0819 5.9e-237 ybiP; hypothetical
+ protein YbiP K00924;
+ COG: COG2194 Predicted membrane-associated,
+ metal-dependent hydrolase;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571111.1"
+ /db_xref="GI:161503999"
+ /db_xref="InterPro:IPR000917"
+ /translation="MNSTLIDSLLARRQAVSPWTGLYFLQSLLINLALGYPFSLLYTA
+ AFTCLLLLLWRYLPRGQKALLGICSLTAAFYFPFGQAYGAPNFNTLLALHSTNMEESS
+ EILTIFPWYSYLTGLFIFTLGIIALRRKKEETRPRWNSLDSLCLLVSVAAFFVAPVQN
+ LAWGGVFKIIDAGYPVFRFAKDVIVNNNEVIEEQHRMSQLSGIKDSWTVTAVKPRYHI
+ YVVVIGESARRDAMGAFGGHWDNTPFASHINGDFFMDYIAASGSTQKSLGLTLNRVVD
+ NKPQYQDNIITLANRAGFQTWWFSNQGQIGEYDTAIASIAKRADEAHFLKNGDFEADK
+ NTRDDALLTMTAQVLATERTQPQLIVLHLMGSHPQACDRTQGKYATFVQSKETSCYLY
+ TMTQTDDLLRQLYTQLRHSGDSFSLVYFSDHGLAFKERGKAVQYLAHDDKFQQNFQVP
+ FMVLSSDSKTHRIINARRSANDFLSFFSQWTGISATEIKHHYRFISEQKAGPVYITNF
+ KLQKVSYNHLDTDVFSLK"
+ misc_feature 2027649..2029226
+ /locus_tag="SARI_02092"
+ /note="Predicted membrane-associated, metal-dependent
+ hydrolase [General function prediction only]; Region:
+ COG2194"
+ /db_xref="CDD:225105"
+ misc_feature 2028303..2029100
+ /locus_tag="SARI_02092"
+ /note="Sulfatase; Region: Sulfatase; pfam00884"
+ /db_xref="CDD:216172"
+ gene complement(2029294..2029809)
+ /gene="ompX"
+ /locus_tag="SARI_02093"
+ CDS complement(2029294..2029809)
+ /gene="ompX"
+ /locus_tag="SARI_02093"
+ /inference="protein motif:HMMPfam:IPR000758"
+ /inference="protein motif:ScanRegExp:IPR000758"
+ /inference="similar to AA sequence:INSD:AAL19769.1"
+ /note="OmpX; involved in cell adhesion; forms an
+ eight-stranded antiparallel beta-barrel that protrudes
+ from the cell surface; mutations in the gene increase
+ cell-surface contact in fimbriated strains but decrease
+ contact in nonfimbriated strains"
+ /codon_start=1
+ /transl_table=11
+ /product="outer membrane protein X"
+ /protein_id="YP_001571112.1"
+ /db_xref="GI:161504000"
+ /db_xref="InterPro:IPR000758"
+ /translation="MKKIACLSALAAVLAFSAGSAVAATSTVTGGYAQSDAQGVANKM
+ NGFNLKYRYEQDDNPLGVIGSFTYTEKDRTNGAGDYNKGQYYGITAGPAYRLNDWASI
+ YGVVGVGYGKFQTTDYPTYKHDTSDYGFSYGAGLQFNPMENVALDFSYEQSRIRSVDV
+ GTWIAGVGYRF"
+ misc_feature complement(2029297..2029809)
+ /gene="ompX"
+ /locus_tag="SARI_02093"
+ /note="outer membrane protein X; Provisional; Region:
+ ompX; PRK09408"
+ /db_xref="CDD:181828"
+ gene 2030162..2031049
+ /locus_tag="SARI_02094"
+ CDS 2030162..2031049
+ /locus_tag="SARI_02094"
+ /inference="protein motif:HMMPfam:IPR000620"
+ /inference="similar to AA sequence:REFSEQ:YP_215815.1"
+ /note="'KEGG: pae:PA1977 2.2e-07 sensor protein GLPS;
+ COG: COG5006 Predicted permease, DMT superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="threonine and homoserine efflux system"
+ /protein_id="YP_001571113.1"
+ /db_xref="GI:161504001"
+ /db_xref="InterPro:IPR000620"
+ /translation="MPGSTRKLPVWLPILVLLIAMSSIQSGASLAKSLFPLVGAPGVT
+ ALRLALGTLILIAFFKPWRLRFAKAQRLPLLFYGLSLGGMNYLFYLSIQTVPLGIAVA
+ LEFTGPLAVALFSSRRPVDFIWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACW
+ AVYILTGQRAGAEHGPATVAVGSLIAAIIFVPIGAVQAGDALWHWSILPLGLAVALLS
+ TALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTGVQIMALCAIIAAS
+ MGSTLTIRREPQIKQVDVK"
+ misc_feature 2030162..2031040
+ /locus_tag="SARI_02094"
+ /note="threonine and homoserine efflux system;
+ Provisional; Region: PRK10532"
+ /db_xref="CDD:182525"
+ misc_feature 2030636..2031004
+ /locus_tag="SARI_02094"
+ /note="EamA-like transporter family; Region: EamA;
+ pfam00892"
+ /db_xref="CDD:216178"
+ gene complement(2031177..2031335)
+ /locus_tag="SARI_02095"
+ CDS complement(2031177..2031335)
+ /locus_tag="SARI_02095"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571114.1"
+ /db_xref="GI:161504002"
+ /translation="MMFVSQAINETKYSIGFSLCFLNLPINLIAQISFNIDFYLQSIG
+ YIKVLFGE"
+ gene 2031350..2031853
+ /locus_tag="SARI_02096"
+ CDS 2031350..2031853
+ /locus_tag="SARI_02096"
+ /inference="protein motif:BlastProDom:IPR002177"
+ /inference="protein motif:Gene3D:IPR012347"
+ /inference="protein motif:HMMPfam:IPR008331"
+ /inference="protein motif:ScanRegExp:IPR002177"
+ /inference="protein motif:superfamily:IPR009078"
+ /inference="similar to AA sequence:INSD:CAD05278.1"
+ /note="binds DNA in a non-sequence-specific manner and is
+ abundant during stationary phase; forms a DNA-protein
+ crystal that protects DNA from damage; required for normal
+ starvation response and long-term stationary viability;
+ forms a homododecameric complex and sequesters iron which
+ provides protection against oxidative damage"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA starvation/stationary phase protection
+ protein Dps"
+ /protein_id="YP_001571115.1"
+ /db_xref="GI:161504003"
+ /db_xref="InterPro:IPR002177"
+ /db_xref="InterPro:IPR008331"
+ /db_xref="InterPro:IPR009078"
+ /db_xref="InterPro:IPR012347"
+ /translation="MSTAKLVKTKASNLLYTRNDVSESDKKATVELLNRQVIQFIDLS
+ LITKQAHWNMRGANFIAVHEMLDGFRAALTDHLDTMAERAVQLGGVALGTTQVINSKT
+ PLKSYPLDIHNVQDHLKELADRYAVVANDVRKAIGEAKDEDTADIFTAASRDLDKFLW
+ FIESNIE"
+ misc_feature 2031389..2031850
+ /locus_tag="SARI_02096"
+ /note="DNA-binding ferritin-like protein (oxidative damage
+ protectant) [Inorganic ion transport and metabolism];
+ Region: Dps; COG0783"
+ /db_xref="CDD:223854"
+ misc_feature 2031440..2031847
+ /locus_tag="SARI_02096"
+ /note="DPS protein, ferritin-like diiron-binding domain;
+ Region: DPS; cd01043"
+ /db_xref="CDD:153102"
+ misc_feature order(2031479..2031484,2031494..2031496,2031500..2031505,
+ 2031536..2031538,2031569..2031571,2031581..2031583,
+ 2031590..2031595)
+ /locus_tag="SARI_02096"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:153102"
+ misc_feature order(2031500..2031502,2031536..2031538,2031548..2031550,
+ 2031581..2031583,2031593..2031595)
+ /locus_tag="SARI_02096"
+ /note="DPS ferroxidase diiron center [ion binding]; other
+ site"
+ /db_xref="CDD:153102"
+ misc_feature order(2031773..2031775,2031794..2031799)
+ /locus_tag="SARI_02096"
+ /note="ion pore; other site"
+ /db_xref="CDD:153102"
+ gene 2032343..2033089
+ /gene="glnH"
+ /locus_tag="SARI_02097"
+ CDS 2032343..2033089
+ /gene="glnH"
+ /locus_tag="SARI_02097"
+ /inference="protein motif:HMMPfam:IPR001638"
+ /inference="protein motif:HMMSmart:IPR001320"
+ /inference="protein motif:HMMSmart:IPR001638"
+ /inference="protein motif:HMMTigr:IPR005768"
+ /inference="protein motif:ScanRegExp:IPR001638"
+ /inference="similar to AA sequence:REFSEQ:NP_459807.1"
+ /note="similar to periplasmic-binding component of ABC
+ transporters"
+ /codon_start=1
+ /transl_table=11
+ /product="glutamine ABC transporter periplasmic protein"
+ /protein_id="YP_001571116.1"
+ /db_xref="GI:161504004"
+ /db_xref="InterPro:IPR001320"
+ /db_xref="InterPro:IPR001638"
+ /db_xref="InterPro:IPR005768"
+ /translation="MKSILKVSLAALTLAFAVSSHAADKKLVVATDTAFVPFEFKQGD
+ KYVGFDIDLWAAIAKELKLDYTLKPMDFSGIIPALQTKNIDLALAGITITDERKKAID
+ FSDGYYKSGLLVMVKANNNDIKSVKDLDGKVVAVKSGTGSVDYAKANIKTKDLRQFPN
+ IDNAYMELGTNRADAVLHDTPNILYFIKTAGNGQFKSVGESLEAQQYGIAFPKGSNEL
+ REKVNGALKTLRENGTYNEIYKKWFGTEPK"
+ misc_feature 2032343..2033086
+ /gene="glnH"
+ /locus_tag="SARI_02097"
+ /note="glutamine ABC transporter periplasmic protein;
+ Reviewed; Region: glnH; PRK09495"
+ /db_xref="CDD:236540"
+ misc_feature 2032421..2033071
+ /gene="glnH"
+ /locus_tag="SARI_02097"
+ /note="Bacterial periplasmic transport systems use
+ membrane-bound complexes and substrate-bound,
+ membrane-associated, periplasmic binding proteins (PBPs)
+ to transport a wide variety of substrates, such as, amino
+ acids, peptides, sugars, vitamins and inorganic...;
+ Region: PBPb; cd00134"
+ /db_xref="CDD:238078"
+ misc_feature order(2032445..2032447,2032556..2032558,2032631..2032633,
+ 2032763..2032765,2032877..2032879)
+ /gene="glnH"
+ /locus_tag="SARI_02097"
+ /note="substrate binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:238078"
+ misc_feature order(2032826..2032828,2032838..2032840,2032856..2032858)
+ /gene="glnH"
+ /locus_tag="SARI_02097"
+ /note="membrane-bound complex binding site; other site"
+ /db_xref="CDD:238078"
+ misc_feature 2032949..2032966
+ /gene="glnH"
+ /locus_tag="SARI_02097"
+ /note="hinge residues; other site"
+ /db_xref="CDD:238078"
+ gene 2033256..2033915
+ /gene="glnP"
+ /locus_tag="SARI_02098"
+ CDS 2033256..2033915
+ /gene="glnP"
+ /locus_tag="SARI_02098"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="protein motif:HMMTigr:IPR010065"
+ /inference="similar to AA sequence:INSD:CAD05276.1"
+ /note="similar to permease component of ABC transporters;
+ mutations impair ability of Escherichia coli to transport
+ and utilize glutamine"
+ /codon_start=1
+ /transl_table=11
+ /product="glutamine ABC transporter permease protein"
+ /protein_id="YP_001571117.1"
+ /db_xref="GI:161504005"
+ /db_xref="InterPro:IPR000515"
+ /db_xref="InterPro:IPR010065"
+ /translation="MQFDWSAIWPAIPLLLEGAKMTLWISILGLAGGLVIGLAAGFAR
+ TFGGWFANHIALIFIEIIRGTPIVVQVMFIYFALPMAFNDLRIDPFSAAVVTIMINSG
+ AYIAEITRGAVLSIHKGFREAGLALGLSRRETIRHVILPLALRRMLPPLGNQWIISIK
+ DTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKI
+ L"
+ misc_feature 2033256..2033900
+ /gene="glnP"
+ /locus_tag="SARI_02098"
+ /note="ABC-type arginine transport system, permease
+ component [Amino acid transport and metabolism]; Region:
+ ArtQ; COG4215"
+ /db_xref="CDD:226670"
+ misc_feature 2033397..2033876
+ /gene="glnP"
+ /locus_tag="SARI_02098"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature order(2033418..2033429,2033433..2033462,2033469..2033474,
+ 2033478..2033480,2033550..2033555,2033559..2033561,
+ 2033565..2033567,2033574..2033579,2033583..2033585,
+ 2033595..2033600,2033607..2033609,2033658..2033660,
+ 2033700..2033705,2033712..2033714,2033733..2033744,
+ 2033751..2033756,2033793..2033798,2033826..2033831,
+ 2033838..2033843,2033847..2033852,2033859..2033864,
+ 2033871..2033876)
+ /gene="glnP"
+ /locus_tag="SARI_02098"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(2033436..2033480,2033733..2033750)
+ /gene="glnP"
+ /locus_tag="SARI_02098"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(2033478..2033480,2033535..2033537,2033751..2033753,
+ 2033787..2033789,2033796..2033798,2033826..2033828)
+ /gene="glnP"
+ /locus_tag="SARI_02098"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(2033610..2033648,2033664..2033669,2033679..2033681)
+ /gene="glnP"
+ /locus_tag="SARI_02098"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene 2033912..2034634
+ /gene="glnQ"
+ /locus_tag="SARI_02099"
+ CDS 2033912..2034634
+ /gene="glnQ"
+ /locus_tag="SARI_02099"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:REFSEQ:NP_455363.1"
+ /note="similar to ATP-binding component of ABC
+ transporters"
+ /codon_start=1
+ /transl_table=11
+ /product="glutamine ABC transporter ATP-binding protein"
+ /protein_id="YP_001571118.1"
+ /db_xref="GI:161504006"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MIEFKNVSKHFGPTQVLHNIDLNIRQGEVVVIIGPSGSGKSTLL
+ RCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGP
+ LRVRGAKKEEAEKQAKELLAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLF
+ DEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDG
+ SPQALIKNPPSPRLQEFLQHVS"
+ misc_feature 2033912..2034631
+ /gene="glnQ"
+ /locus_tag="SARI_02099"
+ /note="glutamine ABC transporter ATP-binding protein;
+ Reviewed; Region: glnQ; PRK09493"
+ /db_xref="CDD:181906"
+ misc_feature 2033915..2034553
+ /gene="glnQ"
+ /locus_tag="SARI_02099"
+ /note="ATP-binding cassette domain of the histidine and
+ glutamine transporters; Region: ABC_HisP_GlnQ; cd03262"
+ /db_xref="CDD:213229"
+ misc_feature 2034011..2034034
+ /gene="glnQ"
+ /locus_tag="SARI_02099"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213229"
+ misc_feature order(2034020..2034025,2034029..2034037,2034161..2034163,
+ 2034392..2034397,2034491..2034493)
+ /gene="glnQ"
+ /locus_tag="SARI_02099"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213229"
+ misc_feature 2034152..2034163
+ /gene="glnQ"
+ /locus_tag="SARI_02099"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213229"
+ misc_feature 2034320..2034349
+ /gene="glnQ"
+ /locus_tag="SARI_02099"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213229"
+ misc_feature 2034380..2034397
+ /gene="glnQ"
+ /locus_tag="SARI_02099"
+ /note="Walker B; other site"
+ /db_xref="CDD:213229"
+ misc_feature 2034404..2034415
+ /gene="glnQ"
+ /locus_tag="SARI_02099"
+ /note="D-loop; other site"
+ /db_xref="CDD:213229"
+ misc_feature 2034479..2034499
+ /gene="glnQ"
+ /locus_tag="SARI_02099"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213229"
+ gene 2034753..2036981
+ /locus_tag="SARI_02100"
+ CDS 2034753..2036981
+ /locus_tag="SARI_02100"
+ /inference="protein motif:HMMPfam:IPR006685"
+ /inference="protein motif:ScanRegExp:IPR006686"
+ /inference="protein motif:superfamily:IPR010920"
+ /inference="protein motif:superfamily:IPR011014"
+ /inference="protein motif:superfamily:IPR011066"
+ /note="'COG: COG0668 Small-conductance mechanosensitive
+ channel;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571119.1"
+ /db_xref="GI:161504007"
+ /db_xref="InterPro:IPR006685"
+ /db_xref="InterPro:IPR006686"
+ /db_xref="InterPro:IPR010920"
+ /db_xref="InterPro:IPR011014"
+ /db_xref="InterPro:IPR011066"
+ /translation="MRWTLFIFFCLLGAPAHSVAIPSVTTGTSTSQQTATAPEPNPEQ
+ KKAAYAALADVLENEASRNELIAQLRESSTTPPTEPVPALAPPAAKDEKTVLENVTTL
+ TRQYGDAFATRFAQLYRNITDAPHKPFNSQTFTNALSHFLFLAVAIFGFYSVIRLCAL
+ PLYRKMGLWARKKNRERSNWLQLPAMIAGAFIIDLLLLALTLFIGQMLSDNFHAGSRT
+ IAFQQSLFLNAFALIEFFKAILRLIFCPNVPELRPFTIQDATARYWNRRMSSLSSLIG
+ YGLIVAVPIISNQVNVQVGAMANVAIMLCITIWALYLIFRNKAEITQHLLNLAERSLA
+ FFSLFIRAFALVWHWLASAYFIVLFFFSLFDPGNSLKFMMGATVRSLAIIGIAAFISG
+ MFTRWIAKTITLSPHTQRNYPELQKRLNGWLSSALKVARFLTVCVTVMLLLNAWGLFD
+ FWHWLHYGAGEKMVDILIRIALILFFSAVGWTILASLIENRLASDIHGRPLPSARTRT
+ LLTLFRNALAVIISTITIMIVLSEIGVNIAPLLAGAGALGLAISFGSQTLVKDIITGV
+ FIQFENGMNTGDLVTIGSLTGTVERMSIRSVGVRQDTGAYHIIPWSSITTFANFVRGI
+ GSVVANYDVDRHEDADKANQALKDAVTALMQTEDIRGLIIGEPTFAGIVGLTNTAFTL
+ RVSFTTLPLKQWTVRFALDSQVKKHFDLANVRAPVQTYQILPAPVGGPLPDSLPPREP
+ TI"
+ misc_feature 2034753..2036978
+ /locus_tag="SARI_02100"
+ /note="putative mechanosensitive channel protein;
+ Provisional; Region: PRK11465"
+ /db_xref="CDD:183147"
+ misc_feature 2036301..2036894
+ /locus_tag="SARI_02100"
+ /note="Mechanosensitive ion channel; Region: MS_channel;
+ pfam00924"
+ /db_xref="CDD:201506"
+ gene complement(2036978..2037904)
+ /locus_tag="SARI_02101"
+ CDS complement(2036978..2037904)
+ /locus_tag="SARI_02101"
+ /inference="protein motif:HMMPanther:IPR010286"
+ /inference="protein motif:HMMPfam:IPR010286"
+ /inference="similar to AA sequence:REFSEQ:YP_151149.1"
+ /note="'KEGG: vfi:VFA1153 4.2e-78 methyltransferase;
+ COG: COG3129 Predicted SAM-dependent methyltransferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative SAM-dependent methyltransferase"
+ /protein_id="YP_001571120.1"
+ /db_xref="GI:161504008"
+ /db_xref="InterPro:IPR010286"
+ /translation="MSAQKPGLHPRNRHQHRYDLAALCQTTPELTSFLTRTPAGEQSV
+ DFANPQAVKALNKALLAHFYAVTHWDIPQGFLCPPVPGRADYIHHLADLLGETTGSIP
+ VQANILDVGVGANCIYPLIGAYEYGWRFTGSEISEAAMSSAQAIIQANTGLSRAIRLR
+ RQKDSTAIFTGIIHKNEYYDATLCNPPFHDSAAAARAGSERKRRNLGQKRDDVLNFGG
+ QQQELCCEGGEVTFIKKMIAESQTFRRQVLWFTTLVSRGENLPPLYRALTEVGAVKVV
+ KKEMAQGQKQSRFIAWTFMDDDQRRRFITRKR"
+ misc_feature complement(2036981..2037904)
+ /locus_tag="SARI_02101"
+ /note="23S rRNA mA1618 methyltransferase; Provisional;
+ Region: PRK11727"
+ /db_xref="CDD:236964"
+ misc_feature complement(2037017..2037901)
+ /locus_tag="SARI_02101"
+ /note="Protein of unknown function (DUF890); Region:
+ Methyltransf_10; pfam05971"
+ /db_xref="CDD:218833"
+ gene 2038082..2038375
+ /locus_tag="SARI_02102"
+ CDS 2038082..2038375
+ /locus_tag="SARI_02102"
+ /inference="protein motif:FPrintScan:IPR000962"
+ /inference="protein motif:HMMPfam:IPR000962"
+ /inference="protein motif:HMMTigr:IPR012783"
+ /inference="protein motif:ScanRegExp:IPR000962"
+ /inference="similar to AA sequence:INSD:CAD05272.1"
+ /note="'KEGG: sme:SMc00768 0.0059 aceA; isocitrate lyase
+ K01637;
+ COG: COG1734 DnaK suppressor protein;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571121.1"
+ /db_xref="GI:161504009"
+ /db_xref="InterPro:IPR000962"
+ /db_xref="InterPro:IPR012783"
+ /translation="MYRYNEENVMASGWAKDDAVNEQINNTIEDAVARARGELPHGES
+ LYECETCGDPIPEARRKAVPGVRLCVSCQQEKDLHNATFSGYNRRGSKDSQLR"
+ misc_feature 2038109..2038372
+ /locus_tag="SARI_02102"
+ /note="hypothetical protein; Provisional; Region:
+ PRK11019"
+ /db_xref="CDD:182903"
+ gene 2038660..2038920
+ /locus_tag="SARI_02103"
+ CDS 2038660..2038920
+ /locus_tag="SARI_02103"
+ /inference="protein motif:HMMPfam:IPR010854"
+ /inference="similar to AA sequence:REFSEQ:YP_151152.1"
+ /note="'COG: NOG13870 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571122.1"
+ /db_xref="GI:161504010"
+ /db_xref="InterPro:IPR010854"
+ /translation="MKTIKYAVAAIALSTLSFGVFAAEPVSASQTQNLHKIGVVSADG
+ ATTLDGLEAKLAEKAAAAGAIAYNITSAVGNDKMSGTAVIYK"
+ misc_feature 2038660..2038917
+ /locus_tag="SARI_02103"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10259"
+ /db_xref="CDD:137782"
+ gene complement(2039083..2040051)
+ /locus_tag="SARI_02104"
+ CDS complement(2039083..2040051)
+ /locus_tag="SARI_02104"
+ /inference="protein motif:BlastProDom:IPR000312"
+ /inference="protein motif:Gene3D:IPR000312"
+ /inference="protein motif:HMMPfam:IPR000312"
+ /inference="similar to AA sequence:REFSEQ:YP_151153.1"
+ /note="'KEGG: rso:RSc0378 2.6e-53 trpD3, RS03346; putative
+ anthranilate phosphoribosyltransferase protein K00766;
+ COG: COG0547 Anthranilate phosphoribosyltransferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="glycosyl transferase family protein"
+ /protein_id="YP_001571123.1"
+ /db_xref="GI:161504011"
+ /db_xref="InterPro:IPR000312"
+ /translation="MDYRKIIKEIGRGKNHARDLDQDTARGLYTRMLNGDVPDLEMGG
+ ILMALRIKGEGEAEMRGFYDAMQHHTFRLTPPVAKPMPVVIPSYNGARKQANLTPLLA
+ ILLHKLGFPVVVHGVSEDPGRVLTETIFALMGVMPTLHAGQAQAKLDGHQPVFVPVSA
+ LCPPLEKQLAMRWRMGVRNSAHSLAKLATPFAEDAALRLSSVSHPEYIPRVATFFSRV
+ GGRALLMHGTEGEVYANPQRCPQISLIDSRGVQVLHERQSDTHDKSLSMPANKDPEVT
+ ARWIERCLAGREPVPQSLKTQMACCLVATGEAATLEDGLARVAQTF"
+ misc_feature complement(2039101..2040051)
+ /locus_tag="SARI_02104"
+ /note="glycosyl transferase family protein; Provisional;
+ Region: PRK08136"
+ /db_xref="CDD:236160"
+ misc_feature complement(2039845..2040048)
+ /locus_tag="SARI_02104"
+ /note="Glycosyl transferase family, helical bundle domain;
+ Region: Glycos_trans_3N; pfam02885"
+ /db_xref="CDD:145834"
+ gene complement(2040081..2042225)
+ /gene="dinG"
+ /locus_tag="SARI_02105"
+ CDS complement(2040081..2042225)
+ /gene="dinG"
+ /locus_tag="SARI_02105"
+ /inference="protein motif:HMMSmart:IPR006554"
+ /inference="protein motif:HMMSmart:IPR006555"
+ /inference="protein motif:HMMSmart:IPR014001"
+ /note="helicase involved in DNA repair and perhaps also
+ replication"
+ /codon_start=1
+ /transl_table=11
+ /product="ATP-dependent DNA helicase DinG"
+ /protein_id="YP_001571124.1"
+ /db_xref="GI:161504012"
+ /db_xref="InterPro:IPR006554"
+ /db_xref="InterPro:IPR006555"
+ /db_xref="InterPro:IPR014001"
+ /translation="MALTAALKAQIAAWYKALQEQIPDFIPRAPQRQMIADVAKTLAG
+ EEGRHLAIEAPTGVGKTLSYLIPGIAIAREEQKTLVVSTANVALQDQIFSKDLPLLRK
+ IIPDLRFTAAFGRGRYVCPRNLAALACSEPAQQDLLAFLDDELTPNNQEEQKRCARLK
+ GDLDSYKWDGLRDHTDIAINDELWRRLSTDKASCLNRNCHYYRECPFFVARREIQEAE
+ VVVANHALVMAAMESEAVLPEPKHLLLVLDEGHHLPDVARDALEMSAEITASWYRLQL
+ DLFSKLVATCMEQFRPKTPPPLANPERLNAHCEEVYELIASLNGILNLYMPATQEAEH
+ RFAMGELPDEVMAICQRLAKLTETLRGLAESFLNDLSDKTGSHDIVRLHRVILQMNRA
+ LGMFEAQSKLWRLASMAQSSGAPVSKWATREVRDGQMHVWFHCVGIRVSDQLEKLLWR
+ SVPHIIVTSATLRSLNSFSRLQEMSGLKEKAGDRFVALDSPFNHVAQGKLVIPQMRCE
+ PTIDNEERHIAEMAAYFREQLESKKHHGMLVLFASGRAMQRFLEHVADLRLLLLVQGD
+ QPRYRLVELHRKRVESGERSVLVGLQSFAEGLDLKGELLTQVHIHKIAFPPIDSPVVI
+ TEGEWLKSLNRYPFEVQSLPSASFNLIQQVGRLIRSHGCRGEVVIYDKRLLTKNYGQR
+ LLNALPVFPIEQPAMPDVIVKPKAKPARRRRR"
+ misc_feature complement(2040138..2042186)
+ /gene="dinG"
+ /locus_tag="SARI_02105"
+ /note="ATP-dependent DNA helicase DinG; Provisional;
+ Region: dinG; PRK11747"
+ /db_xref="CDD:236966"
+ misc_feature complement(2041422..>2041613)
+ /gene="dinG"
+ /locus_tag="SARI_02105"
+ /note="DEAD_2; Region: DEAD_2; pfam06733"
+ /db_xref="CDD:219153"
+ misc_feature complement(2040162..2040647)
+ /gene="dinG"
+ /locus_tag="SARI_02105"
+ /note="Helicase C-terminal domain; Region: Helicase_C_2;
+ pfam13307"
+ /db_xref="CDD:222037"
+ gene complement(2042216..2042368)
+ /locus_tag="SARI_02106"
+ CDS complement(2042216..2042368)
+ /locus_tag="SARI_02106"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571125.1"
+ /db_xref="GI:161504013"
+ /translation="MPDKARAAAIRHIKAALRAAFQNQQKRYFPTLKCDTIVAVYTVF
+ QVFSWH"
+ gene complement(2042431..2043798)
+ /locus_tag="SARI_02107"
+ CDS complement(2042431..2043798)
+ /locus_tag="SARI_02107"
+ /inference="protein motif:HMMPfam:IPR001650"
+ /inference="protein motif:HMMPfam:IPR011545"
+ /inference="protein motif:HMMSmart:IPR001650"
+ /inference="protein motif:HMMSmart:IPR014001"
+ /inference="protein motif:ScanRegExp:IPR000629"
+ /inference="similar to AA sequence:REFSEQ:NP_455358.1"
+ /note="this helicase is not essential cell growth"
+ /codon_start=1
+ /transl_table=11
+ /product="ATP-dependent RNA helicase RhlE"
+ /protein_id="YP_001571126.1"
+ /db_xref="GI:161504014"
+ /db_xref="InterPro:IPR000629"
+ /db_xref="InterPro:IPR001650"
+ /db_xref="InterPro:IPR011545"
+ /db_xref="InterPro:IPR014001"
+ /translation="MSFDSLGLNPDILRAIAEQGYREPTPIQQQAIPAVLEGRDLMAS
+ AQTGTGKTAGFTLPLLQHLITHQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL
+ NIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADR
+ MLDMGFIHDIRRVLAKLPPKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASE
+ QVTQHVHFVDKKRKRELLSLLIGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIH
+ GNKSQGARTRALADFKSGDLRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIG
+ RTGRAAATGEALSLVCIDEHKLLRDIEKLLKKEIPRITTPGYEPDPSIKAEPIQNGRQ
+ QRGGGGGGRGRGQSQGGAGRSQQPRRQDSGAPKAKSKPRAGEGKPAGDKARPPRRPRR
+ ITPAQ"
+ misc_feature complement(2042473..2043798)
+ /locus_tag="SARI_02107"
+ /note="ATP-dependent RNA helicase RhlE; Provisional;
+ Region: PRK10590"
+ /db_xref="CDD:236722"
+ misc_feature complement(2043172..2043792)
+ /locus_tag="SARI_02107"
+ /note="DEAD-box helicases. A diverse family of proteins
+ involved in ATP-dependent RNA unwinding, needed in a
+ variety of cellular processes including splicing, ribosome
+ biogenesis and RNA degradation. The name derives from the
+ sequence of the Walker B motif; Region: DEADc; cd00268"
+ /db_xref="CDD:238167"
+ misc_feature complement(2043643..2043657)
+ /locus_tag="SARI_02107"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238167"
+ misc_feature complement(2043322..2043333)
+ /locus_tag="SARI_02107"
+ /note="Mg++ binding site [ion binding]; other site"
+ /db_xref="CDD:238167"
+ misc_feature complement(2043232..2043240)
+ /locus_tag="SARI_02107"
+ /note="motif III; other site"
+ /db_xref="CDD:238167"
+ misc_feature complement(2042755..2043144)
+ /locus_tag="SARI_02107"
+ /note="Helicase superfamily c-terminal domain; associated
+ with DEXDc-, DEAD-, and DEAH-box proteins, yeast
+ initiation factor 4A, Ski2p, and Hepatitis C virus NS3
+ helicases; this domain is found in a wide variety of
+ helicases and helicase related proteins; may...; Region:
+ HELICc; cd00079"
+ /db_xref="CDD:238034"
+ misc_feature complement(order(2042887..2042895,2042968..2042973,
+ 2043031..2043042))
+ /locus_tag="SARI_02107"
+ /note="nucleotide binding region [chemical binding]; other
+ site"
+ /db_xref="CDD:238034"
+ misc_feature complement(order(2042785..2042787,2042794..2042796,
+ 2042806..2042808,2042869..2042871))
+ /locus_tag="SARI_02107"
+ /note="ATP-binding site [chemical binding]; other site"
+ /db_xref="CDD:238034"
+ gene 2044028..2044702
+ /locus_tag="SARI_02108"
+ CDS 2044028..2044702
+ /locus_tag="SARI_02108"
+ /inference="protein motif:FPrintScan:IPR001647"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR001647"
+ /inference="protein motif:ScanRegExp:IPR001647"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:INSD:"
+ /note="'COG: COG1309 Transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative DNA-binding transcriptional regulator"
+ /protein_id="YP_001571127.1"
+ /db_xref="GI:161504015"
+ /db_xref="InterPro:IPR001647"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /translation="MNISTTTTKGEQAKSQLIAAALAQFGEYGLHATTRDIAALAGQN
+ IAAITYYFGSKEDLYLACAQWIADFLGEKFRPHAEKAEHLFSQPAPDRDAIRELILLA
+ CKNMIMLLTQEHTVNLSKFISREQLSPTAAYQLVHEQVIDPLHTYLTRLIAAYTGCDA
+ NDTRMILHTHALLGEVLAFRLGKETILLRTGWPQFDEEKTELIYQTVTCHIDLILHGL
+ TQRSLD"
+ misc_feature 2044028..2044699
+ /locus_tag="SARI_02108"
+ /note="putative DNA-binding transcriptional regulator;
+ Provisional; Region: PRK11552"
+ /db_xref="CDD:236928"
+ misc_feature 2044076..2044213
+ /locus_tag="SARI_02108"
+ /note="Bacterial regulatory proteins, tetR family; Region:
+ TetR_N; pfam00440"
+ /db_xref="CDD:201228"
+ misc_feature 2044310..2044681
+ /locus_tag="SARI_02108"
+ /note="Domain of unknown function (DUF1956); Region:
+ DUF1956; pfam09209"
+ /db_xref="CDD:220143"
+ gene 2044702..2045697
+ /locus_tag="SARI_02109"
+ CDS 2044702..2045697
+ /locus_tag="SARI_02109"
+ /inference="protein motif:HMMPfam:IPR006143"
+ /inference="protein motif:superfamily:IPR011053"
+ /inference="similar to AA sequence:INSD:AAL19755.1"
+ /note="'COG: COG0845 Membrane-fusion protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571128.1"
+ /db_xref="GI:161504016"
+ /db_xref="InterPro:IPR006143"
+ /db_xref="InterPro:IPR011053"
+ /translation="MKKPVVIGLAIAAIVTVIAGGTWWYQSRQDDGLTLYGNVDIRTV
+ NISFRVGGRLASLNVDEGDTIKAGQVLGELDHAPYENALMQAKAGVSVAQAQYDLMLA
+ GYRDEEIAQAAAAVRQAQAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQAT
+ LKSAQDKLSQYRTGNREQDIAQAKASLEQAKAQLAQAQLDLQDTTLIAPSNGTLLTRA
+ VEPGSMLNAGSTVLTLSLTRPVWVRAYVDERNLSQTQPGREILLYTDGRPDKPYHGKI
+ GFVSPTAEFTPKTVETPDLRTDLVYRLRIIVTDADDALRQGMPVTVKFNDEARHE"
+ misc_feature 2044702..2045694
+ /locus_tag="SARI_02109"
+ /note="putative efflux pump membrane fusion protein;
+ Provisional; Region: PRK03598"
+ /db_xref="CDD:235136"
+ misc_feature <2044828..2044923
+ /locus_tag="SARI_02109"
+ /note="Lipoyl domain of the dihydrolipoyl acyltransferase
+ component (E2) of 2-oxo acid dehydrogenases. 2-oxo acid
+ dehydrogenase multienzyme complexes, like pyruvate
+ dehydrogenase (PDH), 2-oxoglutarate dehydrogenase (OGDH)
+ and branched-chain 2-oxo acid...; Region: lipoyl_domain;
+ cd06849"
+ /db_xref="CDD:133458"
+ misc_feature 2045323..2045652
+ /locus_tag="SARI_02109"
+ /note="HlyD family secretion protein; Region: HlyD_3;
+ pfam13437"
+ /db_xref="CDD:222128"
+ gene 2045690..2047426
+ /locus_tag="SARI_02110"
+ CDS 2045690..2047426
+ /locus_tag="SARI_02110"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /note="'KEGG: rru:Rru_A1792 5.3e-165 ABC transporter
+ component K01990;
+ COG: COG1131 ABC-type multidrug transport system, ATPase
+ component;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571129.1"
+ /db_xref="GI:161504017"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MSEAVITLHGLTKRFAGMDKPAVAPLDCTIHSGYVTGLVGPDGA
+ GKTTLMRMLAGLLKADGGGASVLGFDPIQNDSELHAVLGYMPQKFGLYEDLTVMENLN
+ LYADLRSVTGEIREKTFARLLAFTALGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVL
+ LLDEPGVGVDPISRRELWQMVHELAGDGMLILWSTSYLDEAEQCRDVLLMNEGELLYQ
+ GEPTALTQTMAGRSFLMSSPQENNRRLLQRALRLPQVSDGMIQGRSVRLILKKEATEE
+ EIRQAEGMPEITLNETTPRFEDAFIDLLGGAGTSESPLGSILHTVEGTPGETVIEAQE
+ LTKKFGDFAATDHVNFVVQRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGKALVLDMD
+ LKVSSGKARQHLGYMAQKFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKIQRMSEAFGL
+ KSIASHPTDALPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMVE
+ KGVTVMVTTHFMDEAEYCDRIGLVYRGKLIASGTPDDLKAQAADAQQADPTMEQAFIT
+ LINDWDKEHTHE"
+ misc_feature 2045702..2046607
+ /locus_tag="SARI_02110"
+ /note="ABC-type multidrug transport system, ATPase
+ component [Defense mechanisms]; Region: CcmA; COG1131"
+ /db_xref="CDD:224054"
+ misc_feature 2045705..2046334
+ /locus_tag="SARI_02110"
+ /note="ATP-binding cassette domain of the drug resistance
+ transporter and related proteins, subfamily A; Region:
+ ABC_DR_subfamily_A; cd03230"
+ /db_xref="CDD:213197"
+ misc_feature 2045807..2045830
+ /locus_tag="SARI_02110"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213197"
+ misc_feature order(2045816..2045821,2045825..2045833,2045948..2045950,
+ 2046176..2046181,2046275..2046277)
+ /locus_tag="SARI_02110"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213197"
+ misc_feature 2045939..2045950
+ /locus_tag="SARI_02110"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213197"
+ misc_feature 2046104..2046133
+ /locus_tag="SARI_02110"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213197"
+ misc_feature 2046164..2046181
+ /locus_tag="SARI_02110"
+ /note="Walker B; other site"
+ /db_xref="CDD:213197"
+ misc_feature 2046188..2046199
+ /locus_tag="SARI_02110"
+ /note="D-loop; other site"
+ /db_xref="CDD:213197"
+ misc_feature 2046263..2046283
+ /locus_tag="SARI_02110"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213197"
+ misc_feature 2046674..2047393
+ /locus_tag="SARI_02110"
+ /note="ABC-type Na+ transport system, ATPase component
+ [Energy production and conversion / Inorganic ion
+ transport and metabolism]; Region: NatA; COG4555"
+ /db_xref="CDD:226927"
+ misc_feature 2046677..2047300
+ /locus_tag="SARI_02110"
+ /note="ATP-binding cassette domain of the drug resistance
+ transporter and related proteins, subfamily A; Region:
+ ABC_DR_subfamily_A; cd03230"
+ /db_xref="CDD:213197"
+ misc_feature 2046773..2046796
+ /locus_tag="SARI_02110"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213197"
+ misc_feature order(2046782..2046787,2046791..2046799,2046914..2046916,
+ 2047142..2047147,2047241..2047243)
+ /locus_tag="SARI_02110"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213197"
+ misc_feature 2046905..2046916
+ /locus_tag="SARI_02110"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213197"
+ misc_feature order(2046965..2046973,2047079..2047099)
+ /locus_tag="SARI_02110"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213197"
+ misc_feature 2047130..2047147
+ /locus_tag="SARI_02110"
+ /note="Walker B; other site"
+ /db_xref="CDD:213197"
+ misc_feature 2047154..2047165
+ /locus_tag="SARI_02110"
+ /note="D-loop; other site"
+ /db_xref="CDD:213197"
+ misc_feature 2047229..2047249
+ /locus_tag="SARI_02110"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213197"
+ gene 2047419..2048549
+ /locus_tag="SARI_02111"
+ CDS 2047419..2048549
+ /locus_tag="SARI_02111"
+ /inference="protein motif:HMMPfam:IPR013525"
+ /inference="similar to AA sequence:INSD:AAL19753.1"
+ /note="'KEGG: fal:FRAAL1796 1.9e-11 putative ABC
+ transporter ATP-binding subunit;
+ COG: COG0842 ABC-type multidrug transport system, permease
+ component;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571130.1"
+ /db_xref="GI:161504018"
+ /db_xref="InterPro:IPR013525"
+ /translation="MSKSLSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGY
+ GINLDSSKLRVGILLEQQSQEALDFTHAMTGSPYIDATISDNRHELIEKMQAGRIRGL
+ VVIPVDFAQQMAHADATAPIQVITDGSEPNTANFVQGYVEGIWQIWQQQRAEDRGEAF
+ EPLIDVQTRYWFNPAAISQHFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLST
+ EVTRVELLLCKLIPYYFLGMLAMLICMLVSVFILGVPYRGSLLILFVITSLFLLSTLG
+ MGLLISTITRNQFNAAQVALNAAFLPSIMLSGFIFQIDSMPAVIRAVTYIIPARYFVS
+ TLQSLFLAGNIPVVLGINVLFLIASAVMFIGLTWLKTKRRLD"
+ misc_feature 2047653..2048540
+ /locus_tag="SARI_02111"
+ /note="ABC-type multidrug transport system, permease
+ component [Defense mechanisms]; Region: COG0842"
+ /db_xref="CDD:223912"
+ misc_feature 2047935..2048540
+ /locus_tag="SARI_02111"
+ /note="ABC-2 family transporter protein; Region:
+ ABC2_membrane_2; pfam12679"
+ /db_xref="CDD:221706"
+ gene 2048581..2049687
+ /locus_tag="SARI_02112"
+ CDS 2048581..2049687
+ /locus_tag="SARI_02112"
+ /inference="protein motif:HMMPfam:IPR013525"
+ /inference="similar to AA sequence:INSD:AAL19752.1"
+ /note="'KEGG: fal:FRAAL1796 5.3e-09 putative ABC
+ transporter ATP-binding subunit;
+ COG: COG0842 ABC-type multidrug transport system, permease
+ component;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571131.1"
+ /db_xref="GI:161504019"
+ /db_xref="InterPro:IPR013525"
+ /translation="MFHRLWTLIRKELQSLLREPQTRAILILPVLIQVILFPYAATLE
+ VTNATIAIYNEDNGKHSVELTQRFARAKAFTHVLLLNSPQEIQPTIDTQKALLLVRFP
+ ANFSRNLDTFQPAPMQLILDGRNSNSAQIAANYLQQIVKVYQQELMDGKPKSNNSELV
+ VRNWYNPNLDYKWFVVPSLIAMITTIGVMIVTSLSVAREREQGTLDQLLVSPLTTWQI
+ FVGKAVPALIVATFQATIVLAIGIWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISS
+ LCATQQQAFIGVFVFMMPAILLSGYVSPVENMPVWLQNLTWINPIRHFTDITKQIYLK
+ DASLGIVWGSLWPLLVIAATTGSAAYAMFRRKVM"
+ misc_feature 2048797..2049678
+ /locus_tag="SARI_02112"
+ /note="ABC-type multidrug transport system, permease
+ component [Defense mechanisms]; Region: COG0842"
+ /db_xref="CDD:223912"
+ misc_feature <2049115..2049579
+ /locus_tag="SARI_02112"
+ /note="ABC-2 type transporter; Region: ABC2_membrane;
+ pfam01061"
+ /db_xref="CDD:216273"
+ gene complement(2049649..2050089)
+ /locus_tag="SARI_02113"
+ CDS complement(2049649..2050089)
+ /locus_tag="SARI_02113"
+ /inference="similar to AA sequence:INSD:AAL19751.1"
+ /note="'COG: NOG09757 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571132.1"
+ /db_xref="GI:161504020"
+ /translation="MREKCFRRKAMKWQQRVRVATGLGCWQIMLHLLVVAMLVIGWMS
+ GTLVRVGLGLCVLYGVTVLLMLALQRHHEQRWRDVADVLEELTTTWYFGTALIVLWLL
+ SRVLQNNVLLALAGLAILAGPAVVSLLAKDKKLHDFASKHRIRR"
+ misc_feature complement(2049661..2050059)
+ /locus_tag="SARI_02113"
+ /note="Putative inner membrane protein YbhQ; Region: YbhQ;
+ pfam11076"
+ /db_xref="CDD:192703"
+ gene 2050192..2050950
+ /locus_tag="SARI_02115"
+ CDS 2050192..2050950
+ /locus_tag="SARI_02115"
+ /inference="protein motif:HMMPfam:IPR005135"
+ /inference="similar to AA sequence:INSD:AAV77850.1"
+ /note="'KEGG: eci:UTI89_C0791 7.3e-42 ybhP; putative
+ DNase;
+ COG: COG3568 Metal-dependent hydrolase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571134.2"
+ /db_xref="GI:448236253"
+ /db_xref="InterPro:IPR005135"
+ /translation="MTQHTRNFSFKVLTINTHKGFTAFNKRFILPELRDAVRTVGADI
+ VCLQEVMGAHEVHPLHIENWPDTTHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRY
+ PIEHYENRDVSVGGSEKRGVLYCRITPPMLNHPIHVMCVHLGLRESHRQAQLTMLAGW
+ VNALPESEPVLVAGDFNDWRQRANPPLKAAGLEEIFTRAHGRPARTFPVSMPLLRLDR
+ IYVKNANASSPTALPLRNWRHLSDHAPLSAEIHL"
+ misc_feature 2050192..2050947
+ /locus_tag="SARI_02115"
+ /note="Metal-dependent hydrolase [General function
+ prediction only]; Region: ElsH; COG3568"
+ /db_xref="CDD:226098"
+ misc_feature order(2050237..2050239,2050336..2050338,2050615..2050617,
+ 2050714..2050716,2050720..2050722,2050840..2050842,
+ 2050915..2050920)
+ /locus_tag="SARI_02115"
+ /note="putative catalytic site [active]"
+ /db_xref="CDD:197306"
+ misc_feature order(2050336..2050338,2050915..2050917)
+ /locus_tag="SARI_02115"
+ /note="putative metal binding site [ion binding]; other
+ site"
+ /db_xref="CDD:197306"
+ misc_feature order(2050615..2050617,2050720..2050722,2050918..2050920)
+ /locus_tag="SARI_02115"
+ /note="putative phosphate binding site [ion binding];
+ other site"
+ /db_xref="CDD:197306"
+ gene 2050947..2052188
+ /locus_tag="SARI_02116"
+ CDS 2050947..2052188
+ /locus_tag="SARI_02116"
+ /inference="protein motif:HMMPfam:IPR001736"
+ /inference="protein motif:HMMSmart:IPR001736"
+ /inference="similar to AA sequence:SwissProt:Q8Z883"
+ /note="'KEGG: stt:t2076 1.9e-224 ybhO; putative
+ phospholipase K06132;
+ COG: COG1502
+ Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi
+ n synthases and related enzymes;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="cardiolipin synthase 2"
+ /protein_id="YP_001571135.1"
+ /db_xref="GI:161504023"
+ /db_xref="InterPro:IPR001736"
+ /translation="MKCGWREGNQIQLLENGDQFYPAVFEAIAQAQQKIILETFILFE
+ DEVGKKLHAALLKAAQRGVKAEVLLDGYGSPDLSDAFVGELTAAGVIFRYYDPRPRLL
+ GLRTNIFRRMHRKIVVIDDRIAFVGGINYSAEHMSDYGPQAKQDYAVRVEGPVVADIL
+ QFEVENLPGQSPARRWWKRHHQAEENRHPGEAQALFVWRDNEEHRDDIERHYLKMLTQ
+ AKREVIIANAYFFPGYRLLHAMRKAARRGVSVKLIVQGEPDMPIVKVGARLLYNYLVK
+ GGVQVYEYRRRPLHGKVALMDDHWATVGSSNLDPLSLSLNLEANLIIHDRNFNQTLRD
+ NLQGIIVNDCKQVDESMLPRRTWWNLSKSVLAFHFLRHFPALVGWLPAHTPHLAQVPP
+ PAQPEMETQDRVDPENTGVKP"
+ misc_feature 2050950..2052182
+ /locus_tag="SARI_02116"
+ /note="cardiolipin synthase 2; Provisional; Region:
+ PRK11263"
+ /db_xref="CDD:236888"
+ misc_feature 2050989..2051423
+ /locus_tag="SARI_02116"
+ /note="Catalytic domain, repeat 1, of bacterial
+ cardiolipin synthase and similar proteins; Region:
+ PLDc_CLS_1; cd09110"
+ /db_xref="CDD:197209"
+ misc_feature order(2051283..2051285,2051289..2051291,2051328..2051330,
+ 2051334..2051336,2051382..2051384)
+ /locus_tag="SARI_02116"
+ /note="putative active site [active]"
+ /db_xref="CDD:197209"
+ misc_feature 2051283..2051285
+ /locus_tag="SARI_02116"
+ /note="catalytic site [active]"
+ /db_xref="CDD:197209"
+ misc_feature 2051535..2052044
+ /locus_tag="SARI_02116"
+ /note="Catalytic domain, repeat 2, of Escherichia coli
+ cardiolipin synthase ybhO and similar proteins; Region:
+ PLDc_ybhO_like_2; cd09159"
+ /db_xref="CDD:197256"
+ misc_feature order(2051814..2051816,2051820..2051822,2051859..2051861,
+ 2051865..2051867,2051898..2051900)
+ /locus_tag="SARI_02116"
+ /note="putative active site [active]"
+ /db_xref="CDD:197256"
+ misc_feature 2051814..2051816
+ /locus_tag="SARI_02116"
+ /note="catalytic site [active]"
+ /db_xref="CDD:197256"
+ gene 2052188..2053150
+ /locus_tag="SARI_02117"
+ CDS 2052188..2053150
+ /locus_tag="SARI_02117"
+ /inference="similar to AA sequence:INSD:CAD05258.1"
+ /note="'COG: COG0392 Predicted integral membrane protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571136.1"
+ /db_xref="GI:161504024"
+ /translation="MAKSHPRWRLAKKVLTWLFFIAVVVLLVVYAKKVDWGDVWTVIR
+ DYNRTALLSAVGLVIISYLLYGCYDLLGRLYCGHKLAKRQVMLVSFVCYAFNLTLSTW
+ VGGIGMRYRLYSRLGLPGSTITRIFSLSITTNWLGYILLGGIIFTFGIVQLPDHWYID
+ EGTLRILGIVLLLIIAVYMWFCAFAKRRYMTIKGQKLVLPSWKFALAQMAISSANWMA
+ MGAIIWLLMGQNVNYFFVLGVLLVSSIAGVIVHIPAGIGVLEAVFLALLAGEHTSQGT
+ IIAALLAYRVLYYFIPLLLALVCYLVLEGRAKKLRAKNERAMAK"
+ misc_feature 2052206..2053129
+ /locus_tag="SARI_02117"
+ /note="Predicted integral membrane protein [Function
+ unknown]; Region: COG0392"
+ /db_xref="CDD:223469"
+ gene complement(2053220..2053924)
+ /locus_tag="SARI_02118"
+ CDS complement(2053220..2053924)
+ /locus_tag="SARI_02118"
+ /inference="protein motif:HMMPfam:IPR006214"
+ /inference="similar to AA sequence:INSD:AAL19744.1"
+ /note="'KEGG: cch:Cag_0640 0.0096 NADH dehydrogenase I
+ subunit 6 K00339;
+ COG: COG0670 Integral membrane protein, interacts with
+ FtsH;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571137.1"
+ /db_xref="GI:161504025"
+ /db_xref="InterPro:IPR006214"
+ /translation="MDRFPRSDSIVQARSGLQTYMAQVYGWMTVGLLLTAFIAWYAAN
+ TPAVMMFVFSSKITFFGLIIAQLALVFVLSGLVHKLSAGMATTLFMLYSALTGLTLSS
+ IFVVYTYSSIASTFVVTGGMFGVMSLYGYTTKRDLSGFGNMLFMALIGIVLASLVNFW
+ LKSETLMWIVTYIGVIVFVGLTAYDTQKLKNIGEQIDTRDSANLRKYSILGALTLYLD
+ FINLFLMLLRIFGNRR"
+ misc_feature complement(2053229..2053924)
+ /locus_tag="SARI_02118"
+ /note="Integral membrane protein, interacts with FtsH
+ [General function prediction only]; Region: COG0670"
+ /db_xref="CDD:223742"
+ misc_feature complement(2053232..2053879)
+ /locus_tag="SARI_02118"
+ /note="Bacterial BAX inhibitor (BI)-1/YccA-like proteins;
+ Region: BI-1-like_bacterial; cd10432"
+ /db_xref="CDD:198414"
+ gene complement(2053972..2054424)
+ /gene="moaE"
+ /locus_tag="SARI_02119"
+ CDS complement(2053972..2054424)
+ /gene="moaE"
+ /locus_tag="SARI_02119"
+ /inference="protein motif:HMMPfam:IPR003448"
+ /inference="similar to AA sequence:INSD:AAX64710.1"
+ /note="catalyzes the conversion of molybdopterin precursor
+ Z into molybdopterin"
+ /codon_start=1
+ /transl_table=11
+ /product="molybdopterin guanine dinucleotide biosynthesis
+ protein MoaE"
+ /protein_id="YP_001571138.1"
+ /db_xref="GI:161504026"
+ /db_xref="InterPro:IPR003448"
+ /translation="MRETRIVVGPAPFSVGDEYPWLAARDEDGAVVTFTGKVRNHNLG
+ DSINALTLEHYPGMTEKALAEIVAEARSRWPLGRVTVIHRIGELWPGDEIVFVGVTSA
+ HRSSAFDAGQFIMDYLKTRAPFWKREATPEGDRWVEARDSDQQSAKRW"
+ misc_feature complement(2054014..2054388)
+ /gene="moaE"
+ /locus_tag="SARI_02119"
+ /note="MoaE family. Members of this family are involved in
+ biosynthesis of the molybdenum cofactor (Moco), an
+ essential cofactor for a diverse group of redox enzymes.
+ Moco biosynthesis is an evolutionarily conserved pathway
+ present in eubacteria, archaea and...; Region: MoaE;
+ cd00756"
+ /db_xref="CDD:238385"
+ misc_feature complement(order(2054077..2054079,2054089..2054091,
+ 2054113..2054115,2054119..2054121,2054146..2054148,
+ 2054308..2054310,2054314..2054316,2054320..2054334,
+ 2054338..2054340,2054356..2054358,2054368..2054370))
+ /gene="moaE"
+ /locus_tag="SARI_02119"
+ /note="MoaE homodimer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:238385"
+ misc_feature complement(order(2054017..2054019,2054047..2054055,
+ 2054059..2054061,2054065..2054070,2054176..2054178,
+ 2054230..2054232,2054242..2054244,2054251..2054253,
+ 2054260..2054262,2054266..2054268))
+ /gene="moaE"
+ /locus_tag="SARI_02119"
+ /note="MoaD interaction [polypeptide binding]; other site"
+ /db_xref="CDD:238385"
+ misc_feature complement(order(2054047..2054049,2054068..2054070))
+ /gene="moaE"
+ /locus_tag="SARI_02119"
+ /note="active site residues [active]"
+ /db_xref="CDD:238385"
+ gene complement(2054426..2054671)
+ /gene="moaD"
+ /locus_tag="SARI_02120"
+ CDS complement(2054426..2054671)
+ /gene="moaD"
+ /locus_tag="SARI_02120"
+ /inference="protein motif:Gene3D:IPR003749"
+ /inference="protein motif:HMMPfam:IPR003749"
+ /inference="protein motif:HMMTigr:IPR010034"
+ /inference="similar to AA sequence:REFSEQ:NP_459783.1"
+ /note="catalyzes the conversion of molybdopterin precursor
+ Z into molybdopterin"
+ /codon_start=1
+ /transl_table=11
+ /product="molybdopterin synthase small subunit"
+ /protein_id="YP_001571139.1"
+ /db_xref="GI:161504027"
+ /db_xref="InterPro:IPR003749"
+ /db_xref="InterPro:IPR010034"
+ /translation="MIKVLFFAQVRELTGTDALDISADFSTVESLRQHLAAKSDRWAL
+ ALEDGKLLAAVNQTLVSFDHPLAAGDEVAFFPPVTGG"
+ misc_feature complement(2054429..2054668)
+ /gene="moaD"
+ /locus_tag="SARI_02120"
+ /note="Ubiquitin domain of MoaD-like proteins; Region:
+ MoaD; cd00754"
+ /db_xref="CDD:176354"
+ misc_feature complement(order(2054429..2054431,2054438..2054446,
+ 2054459..2054461,2054504..2054506,2054636..2054641,
+ 2054645..2054653))
+ /gene="moaD"
+ /locus_tag="SARI_02120"
+ /note="MoaE interaction surface [polypeptide binding];
+ other site"
+ /db_xref="CDD:176354"
+ misc_feature complement(order(2054429..2054431,2054438..2054440,
+ 2054444..2054446,2054636..2054641,2054648..2054653))
+ /gene="moaD"
+ /locus_tag="SARI_02120"
+ /note="MoeB interaction surface [polypeptide binding];
+ other site"
+ /db_xref="CDD:176354"
+ misc_feature complement(2054429..2054431)
+ /gene="moaD"
+ /locus_tag="SARI_02120"
+ /note="thiocarboxylated glycine; other site"
+ /db_xref="CDD:176354"
+ gene complement(2054664..2055149)
+ /gene="moaC"
+ /locus_tag="SARI_02121"
+ CDS complement(2054664..2055149)
+ /gene="moaC"
+ /locus_tag="SARI_02121"
+ /inference="protein motif:BlastProDom:IPR002820"
+ /inference="protein motif:Gene3D:IPR002820"
+ /inference="protein motif:HMMPfam:IPR002820"
+ /inference="protein motif:HMMPIR:IPR012087"
+ /inference="protein motif:HMMTigr:IPR002820"
+ /inference="protein motif:superfamily:IPR002820"
+ /inference="similar to AA sequence:REFSEQ:NP_459782.1"
+ /note="MoaC; along with MoaA is involved in conversion of
+ a guanosine derivative into molybdopterin precursor Z;
+ involved in molybdenum cofactor biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="molybdenum cofactor biosynthesis protein MoaC"
+ /protein_id="YP_001571140.1"
+ /db_xref="GI:161504028"
+ /db_xref="InterPro:IPR002820"
+ /db_xref="InterPro:IPR012087"
+ /translation="MSQLTHINAAGEAHMVDVSAKAETVREARAEAFVTMHSETLAMI
+ IDGKHHKGDVFATARIAGIQAAKRTWELIPLCHPLLLSKVEVQLQAESEHNRVRIESL
+ CRLTGKTGVEMEALTAASVAALTIYDMCKAVQKDMVIGPVRLLAKSGGNSGDFKVDTH
+ D"
+ misc_feature complement(2054688..2055107)
+ /gene="moaC"
+ /locus_tag="SARI_02121"
+ /note="MoaC family, prokaryotic and eukaryotic. Members of
+ this family are involved in molybdenum cofactor (Moco)
+ biosynthesis, an essential cofactor of a diverse group of
+ redox enzymes. MoaC, a small hexameric protein, converts,
+ together with MoaA, a guanosine...; Region: MoaC_PE;
+ cd01420"
+ /db_xref="CDD:238708"
+ misc_feature complement(order(2054700..2054735,2054889..2054909,
+ 2054916..2054993,2055096..2055107))
+ /gene="moaC"
+ /locus_tag="SARI_02121"
+ /note="trimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238708"
+ misc_feature complement(order(2054742..2054750,2054931..2054945,
+ 2054991..2054999))
+ /gene="moaC"
+ /locus_tag="SARI_02121"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238708"
+ misc_feature complement(order(2054757..2054759,2054766..2054768,
+ 2054799..2054801,2054808..2054816,2054823..2054825,
+ 2054919..2054924,2054928..2054930,2054949..2054951,
+ 2054997..2054999))
+ /gene="moaC"
+ /locus_tag="SARI_02121"
+ /note="putative active site [active]"
+ /db_xref="CDD:238708"
+ gene complement(2055152..2055664)
+ /locus_tag="SARI_02122"
+ CDS complement(2055152..2055664)
+ /locus_tag="SARI_02122"
+ /inference="protein motif:BlastProDom:IPR001453"
+ /inference="protein motif:HMMPfam:IPR001453"
+ /inference="protein motif:HMMPIR:IPR012245"
+ /inference="protein motif:HMMTigr:IPR001453"
+ /inference="protein motif:HMMTigr:IPR013484"
+ /inference="protein motif:ScanRegExp:IPR008284"
+ /inference="protein motif:superfamily:IPR001453"
+ /inference="similar to AA sequence:INSD:AAX64707.1"
+ /note="'KEGG: mtu:Rv0984 1.9e-11 moaB2; possible
+ pterin-4-alpha-carbinolamine dehydratase MoaB2 (PHS)
+ (4-alpha-hydroxy-tetrahydropterin dehydratase)
+ (pterin-4-A-carbinolamine dehydratase) (phenylalanine
+ hydroxylase-stimulating protein) (PHS) (pterin
+ carbinolamine dehydratase) (PCD);
+ COG: COG0521 Molybdopterin biosynthesis enzymes;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571141.1"
+ /db_xref="GI:161504029"
+ /db_xref="InterPro:IPR001453"
+ /db_xref="InterPro:IPR008284"
+ /db_xref="InterPro:IPR012245"
+ /db_xref="InterPro:IPR013484"
+ /translation="MSQVSAEFIPTRIAILTVSSRRGEEDDTSGHYLRDSAQEAGHEV
+ VAKAIVKENRYAIRAQVSAWIASDEVQVVLITGGTGLTEGDQAPEALLPLFDREVEGF
+ GEVFRMLSFEEIGTATLQSRAVAGVANKTLIFAMPGSTTACRTAWENIIAPQLDARTR
+ PCNFHPHLKK"
+ misc_feature complement(2055197..2055631)
+ /locus_tag="SARI_02122"
+ /note="MogA_MoaB family. Members of this family are
+ involved in biosynthesis of the molybdenum cofactor (MoCF)
+ an essential cofactor of a diverse group of redox enzymes.
+ MoCF biosynthesis is an evolutionarily conserved pathway
+ present in eubacteria, archaea; Region: MogA_MoaB;
+ cd00886"
+ /db_xref="CDD:238451"
+ misc_feature complement(order(2055230..2055232,2055239..2055241,
+ 2055251..2055256,2055335..2055337,2055425..2055433))
+ /locus_tag="SARI_02122"
+ /note="MPT binding site; other site"
+ /db_xref="CDD:238451"
+ misc_feature complement(order(2055299..2055301,2055308..2055310,
+ 2055341..2055346,2055353..2055355,2055368..2055376,
+ 2055398..2055400,2055410..2055412,2055416..2055421,
+ 2055425..2055427))
+ /locus_tag="SARI_02122"
+ /note="trimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238451"
+ gene complement(2055686..2056708)
+ /gene="moaA"
+ /locus_tag="SARI_02123"
+ CDS complement(2055686..2056708)
+ /gene="moaA"
+ /locus_tag="SARI_02123"
+ /inference="protein motif:HMMPfam:IPR007197"
+ /inference="protein motif:HMMPfam:IPR010505"
+ /inference="protein motif:HMMSmart:IPR006638"
+ /inference="protein motif:HMMTigr:IPR013483"
+ /inference="protein motif:ScanRegExp:IPR000385"
+ /inference="similar to AA sequence:INSD:AAX64706.1"
+ /note="'together with moaC, is involved in the conversion
+ of a guanosine derivative (GXP) into molybdopterin
+ precursor Z'"
+ /codon_start=1
+ /transl_table=11
+ /product="molybdenum cofactor biosynthesis protein A"
+ /protein_id="YP_001571142.1"
+ /db_xref="GI:161504030"
+ /db_xref="InterPro:IPR000385"
+ /db_xref="InterPro:IPR006638"
+ /db_xref="InterPro:IPR007197"
+ /db_xref="InterPro:IPR010505"
+ /db_xref="InterPro:IPR013483"
+ /translation="MTPPPVFGKVYMASQLTDAFARKFYYLRLSITDVCNFRCTYCLP
+ DGYKLGGVTNNGFLTVDEIRRVTRAFASLGTEKVRLTGGEPSLRRDFTDIIAAVGENE
+ AIRQIAVTTNGYRLARDAANWREAGLTGVNVSVDSLDARQFHAITGQDKFRQVMAGID
+ AAFDAGFEKVKVNTVLMRDVNHHQLDTFLAWIQPRPIQLRFIELMETGEGSDLFRKHH
+ ISGQVLRDELIKRGWIHQLRLRSDGPAQVFCHPDYAGEIGLIMPYEKDFCATCNRLRV
+ SSVGKLHLCLFGDGGVSLRDLLQDDAQQHALEERISDALREKKQTHFLHQSNTGITQN
+ LSYIGG"
+ misc_feature complement(2055689..2056684)
+ /gene="moaA"
+ /locus_tag="SARI_02123"
+ /note="molybdenum cofactor biosynthesis protein A;
+ Reviewed; Region: moaA; PRK00164"
+ /db_xref="CDD:234672"
+ misc_feature complement(2056082..2056624)
+ /gene="moaA"
+ /locus_tag="SARI_02123"
+ /note="Radical SAM superfamily. Enzymes of this family
+ generate radicals by combining a 4Fe-4S cluster and
+ S-adenosylmethionine (SAM) in close proximity. They are
+ characterized by a conserved CxxxCxxC motif, which
+ coordinates the conserved iron-sulfur cluster; Region:
+ Radical_SAM; cd01335"
+ /db_xref="CDD:100105"
+ misc_feature complement(order(2056103..2056108,2056178..2056180,
+ 2056307..2056309,2056373..2056381,2056457..2056462,
+ 2056466..2056468,2056580..2056588,2056592..2056594,
+ 2056598..2056600,2056604..2056606))
+ /gene="moaA"
+ /locus_tag="SARI_02123"
+ /note="FeS/SAM binding site; other site"
+ /db_xref="CDD:100105"
+ misc_feature complement(2055740..2056120)
+ /gene="moaA"
+ /locus_tag="SARI_02123"
+ /note="Molybdenum Cofactor Synthesis C; Region:
+ Mob_synth_C; pfam06463"
+ /db_xref="CDD:115139"
+ gene 2057071..2057979
+ /locus_tag="SARI_02124"
+ CDS 2057071..2057979
+ /locus_tag="SARI_02124"
+ /inference="protein motif:HMMPfam:IPR002882"
+ /inference="protein motif:HMMTigr:IPR010119"
+ /inference="similar to AA sequence:REFSEQ:YP_215786.1"
+ /note="'KEGG: mth:MTH1018 0.00046 LPPG:FO
+ 2-phopspho-L-lactate transferase K00924;
+ COG: COG0391 Uncharacterized conserved protein;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571143.1"
+ /db_xref="GI:161504031"
+ /db_xref="InterPro:IPR002882"
+ /db_xref="InterPro:IPR010119"
+ /translation="MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDN
+ GGSTGRIRRSEGGIAWGDMRNCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLK
+ ALDHLSVRPLEAINLIRNLLKVDAQLIPMSELPVDLMAIDEHGHEIYGEVNIDQLATP
+ PQELMLTPKVPATREAVQAINDADLILIGPGSFYTSLMPGLLLDELAQALRRTPAPMV
+ YIGNLGRELSLPAASLTLVDKLAMMEQYIGKKVIDAVVVGPKIDVSAVNDRVVIQEVL
+ EASDIPYRHDRQLLHNALEKALQALG"
+ misc_feature 2057176..2057967
+ /locus_tag="SARI_02124"
+ /note="conserved hypothetical protein, cofD-related;
+ Region: CofD_related; TIGR01826"
+ /db_xref="CDD:211689"
+ misc_feature 2057176..2057958
+ /locus_tag="SARI_02124"
+ /note="family of mostly uncharacterized proteins similar
+ to B.subtilis YvcK; Region: YvcK_like; cd07187"
+ /db_xref="CDD:132873"
+ misc_feature order(2057197..2057199,2057209..2057211,2057251..2057253,
+ 2057260..2057262,2057362..2057364)
+ /locus_tag="SARI_02124"
+ /note="putative substrate binding pocket [chemical
+ binding]; other site"
+ /db_xref="CDD:132873"
+ misc_feature order(2057341..2057343,2057356..2057358,2057365..2057370,
+ 2057377..2057382,2057386..2057391,2057419..2057421,
+ 2057428..2057433)
+ /locus_tag="SARI_02124"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:132873"
+ misc_feature order(2057641..2057646,2057656..2057658,2057743..2057748)
+ /locus_tag="SARI_02124"
+ /note="phosphate binding site [ion binding]; other site"
+ /db_xref="CDD:132873"
+ gene complement(2058082..2060382)
+ /locus_tag="SARI_02125"
+ CDS complement(2058082..2060382)
+ /locus_tag="SARI_02125"
+ /inference="protein motif:superfamily:IPR011013"
+ /inference="similar to AA sequence:INSD:AAL19737.1"
+ /note="'KEGG: cal:orf19.5148 4.7e-11 CDC35; adenylate
+ cyclase K01768;
+ COG: COG4886 Leucine-rich repeat (LRR) protein;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571144.1"
+ /db_xref="GI:161504032"
+ /db_xref="InterPro:IPR011013"
+ /translation="MFNITNTQSTVRNQSISHGASKEAPPEEDIWNKTSVFFSSEHQV
+ EAKNCISYLCHPPETVSSEEIKSKFEWLKGLAYPAYADNIQCGREGTNQYCILNENSQ
+ EILSIIFNSDSYTVECGGETVTYTRETAGEQASSASGPGSKDAVNYDVIWSEWVKSAP
+ TEEAPNREKAVQRMRDCLKKNETRLCLDRLKLTTIPHSIPEQIITLILDKNNLLSLPE
+ NLHANIKELSVRENNLTRLPETLPDTIEIMDLDRNNIIELPEHLPSALQTLIVSCNAL
+ TALPDTLPDGLQTLDVYRNNLTALPEHLPSSIVELFVFNNSLTFLPATLPMNLEILVA
+ DDNALTCLPESLPPALKNLSVKNNRITVLPETLPPTLQELYIDHNLLINLPENLPAAL
+ KYLEASYNQLARLPESLPSFLSEGPQPARILIEHNPISERTIQNMQMLMSSEGYRGPR
+ VFFAMGEFSNVRVTRPLHEAVQGWLTCLKEEDVNQWRAFETEVNAAAFSIFLDRLSDT
+ QNTRHPDFKEQVSAWLMRLAEDSTLRELAFTIAMDATISCEDRVTLAYHQMQEATLVY
+ DAERGAFDSKFTELIMAGREIFRLEKIESLAREKVKRLFFIDEIEVFLGFQNQLRESL
+ SLTTMTQDMRFYNVSGITESDLDEAEVRIKVAENSQFNQWFSCWEPWHKVLERIAPDD
+ WQEMMNKRVEYIESNEYQSRVNAKLSALKIAGDSDPERAIEIRADAERAIGRQVMEEI
+ NQSLFTELTEKVLTKQRINSLMTPYW"
+ misc_feature complement(2058085..2060382)
+ /locus_tag="SARI_02125"
+ /note="E3 ubiquitin-protein ligase SlrP; Provisional;
+ Region: PRK15370"
+ /db_xref="CDD:185268"
+ misc_feature complement(<2059987..2060292)
+ /locus_tag="SARI_02125"
+ /note="pathogenicity island 2 effector protein SseI;
+ Provisional; Region: PRK15372"
+ /db_xref="CDD:185270"
+ misc_feature complement(2059867..>2059962)
+ /locus_tag="SARI_02125"
+ /note="Type III secretion system leucine rich repeat
+ protein; Region: TTSSLRR; pfam12468"
+ /db_xref="CDD:204932"
+ gene complement(2060375..2060533)
+ /locus_tag="SARI_02126"
+ CDS complement(2060375..2060533)
+ /locus_tag="SARI_02126"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571145.1"
+ /db_xref="GI:161504033"
+ /translation="MKALEFIKKVLQKMNNLSTIMTKMTFYLKRRISVSVIFRLLKVT
+ SEQVEKNV"
+ gene complement(2060906..2062927)
+ /locus_tag="SARI_02127"
+ CDS complement(2060906..2062927)
+ /locus_tag="SARI_02127"
+ /inference="protein motif:HMMPfam:IPR001650"
+ /inference="protein motif:HMMPfam:IPR001943"
+ /inference="protein motif:HMMPfam:IPR006935"
+ /inference="protein motif:HMMSmart:IPR001650"
+ /inference="protein motif:HMMSmart:IPR014001"
+ /inference="protein motif:HMMTigr:IPR004807"
+ /inference="protein motif:superfamily:IPR009055"
+ /note="'The UvrABC repair system catalyzes the recognition
+ and processing of DNA lesions. The beta-hairpin of the
+ Uvr-B subunit is inserted between the strands, where it
+ probes for the presence of a lesion'"
+ /codon_start=1
+ /transl_table=11
+ /product="excinuclease ABC subunit B"
+ /protein_id="YP_001571146.1"
+ /db_xref="GI:161504034"
+ /db_xref="InterPro:IPR001650"
+ /db_xref="InterPro:IPR001943"
+ /db_xref="InterPro:IPR004807"
+ /db_xref="InterPro:IPR006935"
+ /db_xref="InterPro:IPR009055"
+ /db_xref="InterPro:IPR014001"
+ /translation="MSKPFKLNSAFKPSGDQPDAIRRLEEGLEDGLAHQTLLGVTGSG
+ KTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYV
+ PSSDTFIEKDASVNEHIEQMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLH
+ LTVGMLIDQRAILRRLAELQYTRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFD
+ EEVERLSLFDPLTGQVEATVPRYTIYPKTHYVTPRERILQAMEEIKDELADRRKVLLA
+ NNKLLEEQRLSQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGL
+ LVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYV
+ SATPGNYELEKSGDEVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQRAVINERVL
+ VTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLRE
+ GLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIG
+ ETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIAKTKAKGKGKGRSTAKTGIVE
+ LDMTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS"
+ misc_feature complement(2060909..2062927)
+ /locus_tag="SARI_02127"
+ /note="excinuclease ABC subunit B; Provisional; Region:
+ PRK05298"
+ /db_xref="CDD:235395"
+ misc_feature complement(<2062631..2062828)
+ /locus_tag="SARI_02127"
+ /note="DEAD-like helicases superfamily. A diverse family
+ of proteins involved in ATP-dependent RNA or DNA
+ unwinding. This domain contains the ATP-binding region;
+ Region: DEXDc; cd00046"
+ /db_xref="CDD:238005"
+ misc_feature complement(2062790..2062804)
+ /locus_tag="SARI_02127"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238005"
+ misc_feature complement(2061269..2061637)
+ /locus_tag="SARI_02127"
+ /note="Helicase superfamily c-terminal domain; associated
+ with DEXDc-, DEAD-, and DEAH-box proteins, yeast
+ initiation factor 4A, Ski2p, and Hepatitis C virus NS3
+ helicases; this domain is found in a wide variety of
+ helicases and helicase related proteins; may...; Region:
+ HELICc; cd00079"
+ /db_xref="CDD:238034"
+ misc_feature complement(order(2061413..2061421,2061494..2061499,
+ 2061557..2061568))
+ /locus_tag="SARI_02127"
+ /note="nucleotide binding region [chemical binding]; other
+ site"
+ /db_xref="CDD:238034"
+ misc_feature complement(order(2061296..2061298,2061305..2061307,
+ 2061317..2061319,2061395..2061397))
+ /locus_tag="SARI_02127"
+ /note="ATP-binding site [chemical binding]; other site"
+ /db_xref="CDD:238034"
+ misc_feature complement(2061143..2061274)
+ /locus_tag="SARI_02127"
+ /note="Ultra-violet resistance protein B; Region: UvrB;
+ pfam12344"
+ /db_xref="CDD:204889"
+ misc_feature complement(2060924..2061031)
+ /locus_tag="SARI_02127"
+ /note="UvrB/uvrC motif; Region: UVR; pfam02151"
+ /db_xref="CDD:145355"
+ gene 2063339..2063467
+ /locus_tag="SARI_02128"
+ CDS 2063339..2063467
+ /locus_tag="SARI_02128"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571147.1"
+ /db_xref="GI:161504035"
+ /translation="MDNCFQPVSPAAWQNPRRTFSPDDKKKLSLFSADYWLMWRGK"
+ gene complement(2063578..2064264)
+ /gene="bioD"
+ /locus_tag="SARI_02129"
+ CDS complement(2063578..2064264)
+ /gene="bioD"
+ /locus_tag="SARI_02129"
+ /inference="protein motif:HMMPfam:IPR002586"
+ /inference="protein motif:HMMPIR:IPR004472"
+ /inference="protein motif:HMMTigr:IPR004472"
+ /inference="similar to AA sequence:SwissProt:Q8ZQQ5"
+ /note="'DTB synthetase; dethiobiotin synthase; involved in
+ production of dethiobiotin from ATP and
+ 7,8-diaminononanoate and carbon dioxide; contains
+ magnesium'"
+ /codon_start=1
+ /transl_table=11
+ /product="dithiobiotin synthetase"
+ /protein_id="YP_001571148.1"
+ /db_xref="GI:161504036"
+ /db_xref="InterPro:IPR002586"
+ /db_xref="InterPro:IPR004472"
+ /translation="MTKRYFVTGTDTEVGKTVASCALLQAATQLGYQTVGYKPVASGS
+ EMTTDGLRNSDALALQRNSSMAQPYSAINPYTFAEPTSPHIVSADEGRTIEAAVLSQG
+ LRTLEAQADWVLIEGAGGWFTPLSDTLTFADWVQAERLPVILVVGVKLGCINHAMLTA
+ LAVKQAGLRLAGWIANDVQPPGARHGEYLATLRRVIPAPLLGEIPWLDVSLQQVAMGQ
+ YLDLSLLERA"
+ misc_feature complement(2063641..2064258)
+ /gene="bioD"
+ /locus_tag="SARI_02129"
+ /note="AAA domain; Region: AAA_26; pfam13500"
+ /db_xref="CDD:222178"
+ misc_feature complement(<2064139..2064258)
+ /gene="bioD"
+ /locus_tag="SARI_02129"
+ /note="The Fer4_NifH superfamily contains a variety of
+ proteins which share a common ATP-binding domain.
+ Functionally, proteins in this superfamily use the energy
+ from hydrolysis of NTP to transfer electron or ion;
+ Region: Fer4_NifH; cl17203"
+ /db_xref="CDD:247757"
+ misc_feature complement(2063650..2064012)
+ /gene="bioD"
+ /locus_tag="SARI_02129"
+ /note="Dethiobiotin synthetase (DTBS) is the penultimate
+ enzyme in the biotin biosynthesis pathway in Escherichia
+ coli and other microorganisms. The enzyme catalyzes
+ formation of the ureido ring of dethiobiotin from
+ (7R,8S)-7,8-diaminononanoic acid (DAPA) and...; Region:
+ DTBS; cd03109"
+ /db_xref="CDD:239383"
+ misc_feature complement(order(2063917..2063919,2063986..2063994))
+ /gene="bioD"
+ /locus_tag="SARI_02129"
+ /note="active site"
+ /db_xref="CDD:239383"
+ misc_feature complement(order(2063908..2063913,2063938..2063943))
+ /gene="bioD"
+ /locus_tag="SARI_02129"
+ /note="ADP binding site [chemical binding]; other site"
+ /db_xref="CDD:239383"
+ gene complement(2064257..2065012)
+ /locus_tag="SARI_02130"
+ CDS complement(2064257..2065012)
+ /locus_tag="SARI_02130"
+ /inference="protein motif:HMMPfam:IPR013216"
+ /inference="protein motif:HMMTigr:IPR011814"
+ /inference="similar to AA sequence:INSD:AAL19733.1"
+ /note="'putative methyltransferase; acyl carrier protein
+ involved in an unidentified step in the synthesis of
+ pimeloyl-CoA, a biotin precursor; member of the bio operon
+ (bioABFCD); in Escherichia coli, bioC-null mutants require
+ biotin for growth'"
+ /codon_start=1
+ /transl_table=11
+ /product="biotin biosynthesis protein BioC"
+ /protein_id="YP_001571149.1"
+ /db_xref="GI:161504037"
+ /db_xref="InterPro:IPR011814"
+ /db_xref="InterPro:IPR013216"
+ /translation="MAQVNKQAIAAAFGRAASQYEQHAFLQQQSADALLTMLAGRQFA
+ SVLDAGCGPGRMSRYWRERGSEVTALDLSLPMLLQARDRKAAHHYLLADIEAIPYVSG
+ VFDLAWSNLAVQWCGDLRGALSELCRVVRPGGTVAFTTLCQGSLPELRQAWQAVDNRT
+ HANSFLPEEAIDHALHGWRAYRQTQAITLCFEDALSAMRSLKGIGATHLHEGREPDVL
+ TRARLRQIQLAWPQRQGKYPLTYHLFMGVIERD"
+ misc_feature complement(2064263..2064979)
+ /locus_tag="SARI_02130"
+ /note="biotin biosynthesis protein BioC; Region: BioC;
+ TIGR02072"
+ /db_xref="CDD:233708"
+ misc_feature complement(2064596..2064877)
+ /locus_tag="SARI_02130"
+ /note="S-adenosylmethionine-dependent methyltransferases
+ (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
+ that use S-adenosyl-L-methionine (SAM or AdoMet) as a
+ substrate for methyltransfer, creating the product
+ S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
+ cd02440"
+ /db_xref="CDD:100107"
+ misc_feature complement(order(2064683..2064685,2064731..2064739,
+ 2064797..2064802,2064848..2064868))
+ /locus_tag="SARI_02130"
+ /note="S-adenosylmethionine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:100107"
+ gene complement(2064996..2066153)
+ /locus_tag="SARI_02131"
+ CDS complement(2064996..2066153)
+ /locus_tag="SARI_02131"
+ /inference="protein motif:HMMPfam:IPR004839"
+ /inference="protein motif:HMMTigr:IPR004723"
+ /inference="protein motif:ScanRegExp:IPR001917"
+ /inference="similar to AA sequence:INSD:AAL19732.1"
+ /note="catalyzes the formation of 8-amino-7-oxononanoate
+ from 6-carboxyhexanoyl-CoA and L-alanine"
+ /codon_start=1
+ /transl_table=11
+ /product="8-amino-7-oxononanoate synthase"
+ /protein_id="YP_001571150.1"
+ /db_xref="GI:161504038"
+ /db_xref="InterPro:IPR001917"
+ /db_xref="InterPro:IPR004723"
+ /db_xref="InterPro:IPR004839"
+ /translation="MSWQQRVDDALTARRATDTLRRRYVVSQGAGRWLVANGRQYLNF
+ SSNDYLGLSQHPQIIRAWQQAATRFGVGSGGSGHISGYSVAHQALEEELAQWLGYPRA
+ LLFISGFAANQAVITALMKKNDRIVADRLSHASLLEAANLSPAQLRRFIHNDTQHLSR
+ LLQSPCPGQQLVVAEGIYSMDGDSAPLAEIQQITHKHHAWLLVDDAHGIGVTGVEGRG
+ TCWLQGMKPELLVVTFGKGFGVSGAAVLCSESVANYLLQFARHLVYSTSMPPAQAQAL
+ SASLAVIRSDEGCERREKLADLVKRFRAGVNASRFTLLNAHSAIQPLVVGDNIRALRL
+ AEALRRRGCWVSAIRPPTVPAGTARLRLTLTQSHEACDIDRLLEVLHGAGE"
+ misc_feature complement(2065002..2066153)
+ /locus_tag="SARI_02131"
+ /note="8-amino-7-oxononanoate synthase; Reviewed; Region:
+ PRK05958"
+ /db_xref="CDD:235655"
+ misc_feature complement(2064999..2066063)
+ /locus_tag="SARI_02131"
+ /note="pyridoxal phosphate-dependent acyltransferase,
+ putative; Region: gly_Cac_T_rel; TIGR01825"
+ /db_xref="CDD:130884"
+ misc_feature complement(order(2065446..2065448,2065455..2065457,
+ 2065533..2065535,2065542..2065544,2065629..2065631,
+ 2065818..2065820,2065827..2065832))
+ /locus_tag="SARI_02131"
+ /note="pyridoxal 5'-phosphate binding pocket [chemical
+ binding]; other site"
+ /db_xref="CDD:99742"
+ misc_feature complement(2065446..2065448)
+ /locus_tag="SARI_02131"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:99742"
+ gene complement(2066150..2067190)
+ /locus_tag="SARI_02132"
+ CDS complement(2066150..2067190)
+ /locus_tag="SARI_02132"
+ /inference="protein motif:HMMPfam:IPR007197"
+ /inference="protein motif:HMMPfam:IPR010722"
+ /inference="protein motif:HMMPIR:IPR002684"
+ /inference="protein motif:HMMSmart:IPR006638"
+ /inference="protein motif:HMMTigr:IPR002684"
+ /inference="similar to AA sequence:REFSEQ:YP_151179.1"
+ /note="'KEGG: spt:SPA1958 1.9e-183 bioB; biotin synthetase
+ K01012;
+ COG: COG0502 Biotin synthase and related enzymes;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="biotin synthetase"
+ /protein_id="YP_001571151.1"
+ /db_xref="GI:161504039"
+ /db_xref="InterPro:IPR002684"
+ /db_xref="InterPro:IPR006638"
+ /db_xref="InterPro:IPR007197"
+ /db_xref="InterPro:IPR010722"
+ /translation="MARHPRWTLSQVTELFEKPLLELLFEAQQIHRQHFDPKQIQVST
+ LLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKNAGSTRFCMGAAW
+ KNPRERDMPYLEQIVQGVKAMGLETCMTLGMLNESQAQRLANAGLDYYNHNLDTSPEF
+ YGNIITTRTYQERLDTLEKVREAGIKVCSGGIVGLGETVNDRAGLLLQLANLPTPPES
+ VPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMC
+ FMAGANSIFYGCKLLTTPNPAEDKDLQLFRKLGLNPQQTRVLAGDNEQQQRLEQTLMT
+ PDTDDYYNAAAL"
+ misc_feature complement(2066156..2067190)
+ /locus_tag="SARI_02132"
+ /note="biotin synthase; Provisional; Region: PRK15108"
+ /db_xref="CDD:185063"
+ misc_feature complement(2066444..2067043)
+ /locus_tag="SARI_02132"
+ /note="Radical SAM superfamily. Enzymes of this family
+ generate radicals by combining a 4Fe-4S cluster and
+ S-adenosylmethionine (SAM) in close proximity. They are
+ characterized by a conserved CxxxCxxC motif, which
+ coordinates the conserved iron-sulfur cluster; Region:
+ Radical_SAM; cd01335"
+ /db_xref="CDD:100105"
+ misc_feature complement(order(2066519..2066524,2066615..2066617,
+ 2066732..2066734,2066801..2066803,2066885..2066890,
+ 2066894..2066896,2067008..2067016,2067020..2067022,
+ 2067026..2067028,2067032..2067034))
+ /locus_tag="SARI_02132"
+ /note="FeS/SAM binding site; other site"
+ /db_xref="CDD:100105"
+ misc_feature complement(2066255..2066533)
+ /locus_tag="SARI_02132"
+ /note="Biotin and Thiamin Synthesis associated domain;
+ Region: BATS; smart00876"
+ /db_xref="CDD:214877"
+ gene 2067277..2068566
+ /locus_tag="SARI_02133"
+ CDS 2067277..2068566
+ /locus_tag="SARI_02133"
+ /inference="protein motif:HMMPanther:IPR005814"
+ /inference="protein motif:HMMPfam:IPR005814"
+ /inference="protein motif:HMMTigr:IPR005815"
+ /inference="protein motif:ScanRegExp:IPR005814"
+ /inference="similar to AA sequence:REFSEQ:NP_805851.1"
+ /note="'catalyzes the formation of
+ S-adenosyl-4-methylthionine-2-oxobutanoate and
+ 7,8-diaminononanoate from S-adenosyl-L-methionine and
+ 8-amino-7-oxononanoate'"
+ /codon_start=1
+ /transl_table=11
+ /product="adenosylmethionine--8-amino-7-oxononanoate
+ transaminase"
+ /protein_id="YP_001571152.1"
+ /db_xref="GI:161504040"
+ /db_xref="InterPro:IPR005814"
+ /db_xref="InterPro:IPR005815"
+ /translation="MTTDDLAFDKRHIWHPYTSMISPLPVYPVARAEGCELILASGER
+ LIEGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHMPAVNLCRKLVAITPEP
+ LECVFLADSGSVSVEVAMKMALQYWRARGESRQRFLTFRNGYHGDTFGAMSVCDPDNS
+ MHSLWKGYLPENLFAPAPQSRMDGEWDEGDIAPFARLMAAHRHEIAAVILEPIVQGAG
+ GMRMYHPEWLRRIRNMCDREGILLIADEIATGFGRTGKLFACEHAGIAPDILCLGKAL
+ TGGTMTLSATLTTRQVAETISNGEAGCFMHGPTFMGNPLACAAACASLTLLESGEWRQ
+ QVASIESQLRAELAPAQSSPRVADVRVLGAIGAVETTHPVNMAALQRFFVGQGVWIRP
+ FGKLIYLMPPYIIRPEQLRRLTQAVNDAVHNETFFSH"
+ misc_feature 2067277..2068560
+ /locus_tag="SARI_02133"
+ /note="adenosylmethionine--8-amino-7-oxononanoate
+ transaminase; Validated; Region: PRK07986"
+ /db_xref="CDD:181189"
+ misc_feature 2067292..2068539
+ /locus_tag="SARI_02133"
+ /note="Acetyl ornithine aminotransferase family. This
+ family belongs to pyridoxal phosphate (PLP)-dependent
+ aspartate aminotransferase superfamily (fold I). The major
+ groups in this CD correspond to ornithine
+ aminotransferase, acetylornithine aminotransferase;
+ Region: OAT_like; cd00610"
+ /db_xref="CDD:99735"
+ misc_feature order(2067607..2067615,2067706..2067711,2067715..2067717,
+ 2067907..2067909,2068009..2068011,2068015..2068020,
+ 2068096..2068098)
+ /locus_tag="SARI_02133"
+ /note="inhibitor-cofactor binding pocket; inhibition site"
+ /db_xref="CDD:99735"
+ misc_feature order(2067610..2067615,2067706..2067711,2067907..2067909,
+ 2068009..2068011,2068018..2068020,2068096..2068098)
+ /locus_tag="SARI_02133"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:99735"
+ misc_feature 2068096..2068098
+ /locus_tag="SARI_02133"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:99735"
+ gene 2068624..2069100
+ /locus_tag="SARI_02134"
+ CDS 2068624..2069100
+ /locus_tag="SARI_02134"
+ /inference="protein motif:HMMPfam:IPR008914"
+ /inference="protein motif:HMMTigr:IPR005247"
+ /inference="similar to AA sequence:INSD:CAD05240.1"
+ /note="YbhB; similar to rat and human kinase inhibitory
+ proteins"
+ /codon_start=1
+ /transl_table=11
+ /product="putative kinase inhibitor protein"
+ /protein_id="YP_001571153.1"
+ /db_xref="GI:161504041"
+ /db_xref="InterPro:IPR005247"
+ /db_xref="InterPro:IPR008914"
+ /translation="MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDEVPVGTK
+ SFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLTQGFGSGLVAVPDGVIQTRTDFGKAG
+ YGGAAPPKGETHRYIFTVHALDVERLEVDEDASGAMVGFNVHFHSLASASITAMFS"
+ misc_feature 2068627..2069094
+ /locus_tag="SARI_02134"
+ /note="PhosphatidylEthanolamine-Binding Protein (PEBP)
+ domain present in bacteria and archaea; Region:
+ PEBP_bact_arch; cd00865"
+ /db_xref="CDD:176643"
+ misc_feature order(2068777..2068782,2068804..2068806,2068810..2068812,
+ 2068936..2068950,2068957..2068959,2068963..2068965,
+ 2068969..2068971)
+ /locus_tag="SARI_02134"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:176643"
+ gene complement(2069185..2070705)
+ /locus_tag="SARI_02135"
+ CDS complement(2069185..2070705)
+ /locus_tag="SARI_02135"
+ /inference="protein motif:HMMPfam:IPR001106"
+ /inference="protein motif:HMMTigr:IPR005921"
+ /inference="protein motif:ScanRegExp:IPR001106"
+ /inference="protein motif:superfamily:IPR008948"
+ /inference="similar to AA sequence:INSD:AAL19728.1"
+ /note="catalyzes the degradation of histidine to urocanate
+ and ammmonia"
+ /codon_start=1
+ /transl_table=11
+ /product="histidine ammonia-lyase"
+ /protein_id="YP_001571154.1"
+ /db_xref="GI:161504042"
+ /db_xref="InterPro:IPR001106"
+ /db_xref="InterPro:IPR005921"
+ /db_xref="InterPro:IPR008948"
+ /translation="MNIITLTPGQLSLSQLHDIWRHPVQICLDASAIDSINASVACVN
+ DIVAEGRTAYGINTGFGLLAQTRIADEDLQNLQRSLVLSHAAGVGDPLDDAMVRLIMV
+ LKINSLARGFSGIRLSVIEALIALVNAGVYPLIPAKGSVGASGDLAPLAHLSLTLLGE
+ GKARWQGEWLPAQTALKKAGLEPVALAAKEGLALLNGTQASTAFALRGLFEAQELFAS
+ AVVCGALTTEAVLGSRRPFDARIHAARGQQGQIDAARLFRHLLTETSAIAESHHHCNK
+ VQDPYSLRCQPQVMGACLTQLRQTKEVLLVEANAVSDNPLVFADAGEVISGGNFHAEP
+ VAMAADNLALAIAEIGALSERRIALMMDKHMSQLPPFLVKNGGVNSGFMIAQVTAAAL
+ ASENKALAHPHSVDSLPTSANQEDHVSMAPAAGRRLWEMAANTRGVIAVEWLAACQGI
+ DLREGLTSSPLLEQARQALREQVAHYTQDRFFAPDIACATALLAQGALQRLVPDFM"
+ misc_feature complement(2069347..2070681)
+ /locus_tag="SARI_02135"
+ /note="Phenylalanine ammonia-lyase (PAL) and histidine
+ ammonia-lyase (HAL); Region: PAL-HAL; cd00332"
+ /db_xref="CDD:176460"
+ misc_feature complement(order(2069728..2069730,2069764..2069766,
+ 2069854..2069856,2069863..2069865,2070118..2070120,
+ 2070130..2070144,2070466..2070468,2070475..2070477,
+ 2070526..2070528,2070532..2070534,2070538..2070546))
+ /locus_tag="SARI_02135"
+ /note="active sites [active]"
+ /db_xref="CDD:176460"
+ misc_feature complement(order(2069404..2069409,2069416..2069418,
+ 2069425..2069430,2069446..2069448,2069455..2069475,
+ 2069506..2069517,2069521..2069538,2069542..2069544,
+ 2069548..2069559,2069563..2069568,2069572..2069577,
+ 2069611..2069613,2069620..2069622,2069629..2069631,
+ 2069641..2069643,2069653..2069655,2069662..2069664,
+ 2069683..2069685,2069695..2069697,2069704..2069709,
+ 2069713..2069733,2069737..2069739,2069752..2069760,
+ 2069773..2069778,2069785..2069790,2069797..2069802,
+ 2069809..2069811,2069818..2069823,2069839..2069844,
+ 2069851..2069856,2069860..2069868,2069872..2069874,
+ 2069956..2069958,2069965..2069967,2069971..2069976,
+ 2069983..2069988,2070241..2070243,2070250..2070252,
+ 2070289..2070294,2070376..2070378,2070439..2070462,
+ 2070469..2070471,2070526..2070531))
+ /locus_tag="SARI_02135"
+ /note="tetramer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:176460"
+ gene complement(2070707..2072392)
+ /locus_tag="SARI_02136"
+ CDS complement(2070707..2072392)
+ /locus_tag="SARI_02136"
+ /inference="protein motif:BlastProDom:IPR000193"
+ /inference="protein motif:HMMPfam:IPR000193"
+ /inference="protein motif:HMMTigr:IPR000193"
+ /inference="protein motif:ScanRegExp:IPR000193"
+ /inference="protein motif:superfamily:IPR010990"
+ /note="catalyzes the formation of
+ 4-imidazolone-5-propanoate from urocanate during histidine
+ metabolism"
+ /codon_start=1
+ /transl_table=11
+ /product="urocanate hydratase"
+ /protein_id="YP_001571155.1"
+ /db_xref="GI:161504043"
+ /db_xref="InterPro:IPR000193"
+ /db_xref="InterPro:IPR010990"
+ /translation="MPESKYRQQTIRAPRGATLTAKSWLTEAPLRMLMNNLDPDVAEN
+ PHELVVYGGIGRAARNWECYDAIVDALTRLEADETLLIQSGKPVGVFKTHDNAPRVLI
+ ANSNLVPHWATWEHFNELDAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHY
+ NGTLAGRWVLTAGLGGMGGAQPLAATLAGACSLTIECQQSRIDFRLRTRYVDEQAATL
+ DDALARIAHYTRAGKAVSVALCANAADILPELVNRGVRPDLVTDQTSAHDPLHGYLPT
+ GWRWEEYQEKALSDPQGTMQAAKRSMAAHVQAMLAFSKMGVPTFDYGNNIRQMAKEMG
+ VENAFDFPGFVPAYIRPLFCRGIGPFRWVALSGDPQDIYKTDAKVKEIVAEDKHLHHW
+ LDMARERIHFQGLPARICWVGLEWRQKLGLAFNEMVRCGEVSAPIVIGRDHLDSGSVA
+ SPNRETEAMRDGSDAVSDWPLLNALLNTASGATWVSLHHGGGVGMGFSQHAGMVIVCD
+ GTDEAAARIRRVLHNDPATGVMRHADAGYDLAVECAVEQGLHLPMVAATQRKR"
+ misc_feature complement(2070728..2072392)
+ /locus_tag="SARI_02136"
+ /note="urocanate hydratase; Provisional; Region: PRK05414"
+ /db_xref="CDD:235448"
+ gene complement(2072590..2073267)
+ /locus_tag="SARI_02137"
+ CDS complement(2072590..2073267)
+ /locus_tag="SARI_02137"
+ /inference="protein motif:Gene3D:IPR000524"
+ /inference="protein motif:HMMPfam:IPR000524"
+ /inference="protein motif:HMMPfam:IPR011663"
+ /inference="protein motif:HMMSmart:IPR000524"
+ /inference="protein motif:HMMTigr:IPR010248"
+ /inference="similar to AA sequence:INSD:CAD05237.1"
+ /note="'KEGG: reh:H16_A3019 1.6e-53 hutC; histidine
+ utilization repressor;
+ COG: COG2188 Transcriptional regulators;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="histidine utilization repressor"
+ /protein_id="YP_001571156.1"
+ /db_xref="GI:161504044"
+ /db_xref="InterPro:IPR000524"
+ /db_xref="InterPro:IPR010248"
+ /db_xref="InterPro:IPR011663"
+ /translation="MKQDICKKIAGGVWQPHDRIPSEAELVAQYGFSRMTINRALREL
+ TDEGWLVRLQGVGTFVAEPKGQSALFEIRSIAEEIAARHHQHRCEVLTLERVRANALQ
+ ARAINVNESDHIFHSVMVHYENDLPVQIEDRCVNADIAADYLTQDYRQTTPHAYLSRI
+ APLTEGEHIVEAVRATAQECAWLTIKEYEPCLLIRRTTWSASRIVSHARLLFPGSRYR
+ LQGRFIS"
+ misc_feature complement(2072593..2073267)
+ /locus_tag="SARI_02137"
+ /note="histidine utilization repressor; Provisional;
+ Region: PRK14999"
+ /db_xref="CDD:184961"
+ misc_feature complement(2073085..2073264)
+ /locus_tag="SARI_02137"
+ /note="Winged helix-turn-helix (WHTH) DNA-binding domain
+ of the GntR family of transcriptional regulators; Region:
+ WHTH_GntR; cd07377"
+ /db_xref="CDD:153418"
+ misc_feature complement(order(2073094..2073105,2073109..2073114,
+ 2073142..2073144,2073151..2073156,2073160..2073174,
+ 2073196..2073201,2073205..2073207))
+ /locus_tag="SARI_02137"
+ /note="DNA-binding site [nucleotide binding]; DNA binding
+ site"
+ /db_xref="CDD:153418"
+ misc_feature complement(2072614..2073027)
+ /locus_tag="SARI_02137"
+ /note="UTRA domain; Region: UTRA; pfam07702"
+ /db_xref="CDD:219527"
+ gene complement(2073360..2074301)
+ /locus_tag="SARI_02138"
+ CDS complement(2073360..2074301)
+ /locus_tag="SARI_02138"
+ /inference="protein motif:Gene3D:IPR006035"
+ /inference="protein motif:HMMPanther:IPR006035"
+ /inference="protein motif:HMMPfam:IPR006035"
+ /inference="protein motif:HMMTigr:IPR005923"
+ /inference="protein motif:ScanRegExp:IPR006035"
+ /inference="similar to AA sequence:SwissProt:Q8ZQR1"
+ /note="catalyzes the formation of glutamate and formamide
+ from N-formimidoyl-L-glutamate"
+ /codon_start=1
+ /transl_table=11
+ /product="formimidoylglutamase"
+ /protein_id="YP_001571157.1"
+ /db_xref="GI:161504045"
+ /db_xref="InterPro:IPR005923"
+ /db_xref="InterPro:IPR006035"
+ /translation="MTQWYPVSPTLWQGRDDSAEAADARRLFQTVIRSEDFAPQDWPK
+ QIALMGFACDEGVKRNAGRPGAAGAPDALRKALANMASHNGHERLVDLGNWVAQAPDL
+ EGAQQTLRDAVRRCLCAGMRTLVLGGGHETAFGHGAGVLDAFAQESVGIINLDAHLDL
+ RQTERATSGTPFRQLAQLCDAQRRVFHYACFGVSRAANTRALWREATRRNVTVVEDLD
+ CYNALAQMTQFIARVDKIYLTIDLDVLPVWEMPAVSAPAALGVPLIQILRLIEPVCRS
+ GKLQAADLVEFNPRFDKDGAAARVAARLGWQIAHWWR"
+ misc_feature complement(2073378..2074163)
+ /locus_tag="SARI_02138"
+ /note="Formimidoylglutamase or HutE; Region:
+ Formimidoylglutamase; cd09988"
+ /db_xref="CDD:212514"
+ misc_feature complement(order(2073444..2073446,2073573..2073575,
+ 2073579..2073581,2073795..2073800,2073825..2073833,
+ 2073837..2073839,2073912..2073914))
+ /locus_tag="SARI_02138"
+ /note="putative active site [active]"
+ /db_xref="CDD:212514"
+ misc_feature complement(order(2073573..2073575,2073579..2073581,
+ 2073825..2073827,2073831..2073833,2073837..2073839,
+ 2073912..2073914))
+ /locus_tag="SARI_02138"
+ /note="putative metal binding site [ion binding]; other
+ site"
+ /db_xref="CDD:212514"
+ gene complement(2074298..2075521)
+ /locus_tag="SARI_02139"
+ CDS complement(2074298..2075521)
+ /locus_tag="SARI_02139"
+ /inference="protein motif:BlastProDom:IPR011550"
+ /inference="protein motif:HMMPfam:IPR006680"
+ /inference="protein motif:HMMTigr:IPR005920"
+ /inference="protein motif:superfamily:IPR011059"
+ /inference="similar to AA sequence:REFSEQ:YP_215772.1"
+ /note="'catalyzing the hydrolysis of
+ 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate,
+ the third step in the histidine degradation pathway'"
+ /codon_start=1
+ /transl_table=11
+ /product="imidazolonepropionase"
+ /protein_id="YP_001571158.1"
+ /db_xref="GI:161504046"
+ /db_xref="InterPro:IPR005920"
+ /db_xref="InterPro:IPR006680"
+ /db_xref="InterPro:IPR011059"
+ /db_xref="InterPro:IPR011550"
+ /translation="MRQLLPGDTAWRNIRLATMDPQQQTPYGLVDNLALIVREGLICD
+ IVPKTQIPVSGDNIHDMQGRLVTPGLIDCHTHLVFAGSRAGEWEQRLNGVSYQYISAQ
+ GGGINATVSATRACAEDTLYLLAHERMMRLINEGVTLLEIKSGYGLELATEEKMLRVA
+ AKLAAENAIDISSTLLAAHATPVEYHGDPDGYIALVCETIIPQLWKKRLFEAVDLFCE
+ SVGFSVAHSERVLQTAKALGIPVKGHVEQLSLLGGAQLVSRYQGLSADHIEYLDEAGV
+ AAMRDGGTVGVLLPGAFYFLGETQRPPVELLRRYQVPVAVASDFNPGTSPFCSLHLAM
+ NMACVQFGLTPEEAWAGVTRHAARALGRQATHGQLRAGFRADFVVWDAEQPVEIVYEP
+ GRNPLYQRVYQGQIT"
+ misc_feature complement(2074304..2075500)
+ /locus_tag="SARI_02139"
+ /note="imidazolonepropionase; Validated; Region: PRK09356"
+ /db_xref="CDD:236478"
+ misc_feature complement(2074310..2075419)
+ /locus_tag="SARI_02139"
+ /note="Imidazolonepropionase/imidazolone-5-propionate
+ hydrolase (Imidazolone-5PH) catalyzes the third step in
+ the histidine degradation pathway, the hydrolysis of
+ (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to
+ N-formimidoyl-L-glutamate. In bacteria; Region:
+ Imidazolone-5PH; cd01296"
+ /db_xref="CDD:238621"
+ misc_feature complement(order(2074565..2074567,2074721..2074723,
+ 2074781..2074783,2074790..2074792,2075294..2075296,
+ 2075300..2075302))
+ /locus_tag="SARI_02139"
+ /note="active site"
+ /db_xref="CDD:238621"
+ gene 2076093..2076299
+ /locus_tag="SARI_02140"
+ CDS 2076093..2076299
+ /locus_tag="SARI_02140"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571159.1"
+ /db_xref="GI:161504047"
+ /translation="MLIYKYCLTYSLHTTEISYSTLARIERNECNGRGNFSHEQENLQ
+ WLKFNLISPQKSHLPQLLDRDISC"
+ gene 2076625..2077908
+ /locus_tag="SARI_02141"
+ CDS 2076625..2077908
+ /locus_tag="SARI_02141"
+ /inference="protein motif:Gene3D:IPR000070"
+ /inference="protein motif:HMMPfam:IPR000070"
+ /inference="protein motif:superfamily:IPR011050"
+ /inference="similar to AA sequence:INSD:CAD05234.1"
+ /note="outer membrane lipoprotein that catalyzes the
+ hydrolysis of the thioester bond in palmitoyl-CoA; YbhC
+ localizes to the cellular poles; member of pectinesterase
+ family"
+ /codon_start=1
+ /transl_table=11
+ /product="putative pectinesterase"
+ /protein_id="YP_001571160.1"
+ /db_xref="GI:161504048"
+ /db_xref="InterPro:IPR000070"
+ /db_xref="InterPro:IPR011050"
+ /translation="MNTLSVSRLALALAFGVTLSACSSTPPDQIPSDQTAPGTASRPI
+ LSANEAKNFVAAHYFASLTPNTAPWSPSPITLPAQPDFVVGPAGTPGVTHTSIQAAVD
+ AAMVKRTNKRQYIAIMPGAYQGTVYIPAAPGSLTLYGTGEKPIDVKIGMAIDGEMSIA
+ DWRRAVNPGGKYMPGKPAWYMFDNCQSKRAATIGVMCSAAFWSQNNGLQLQNLTIENT
+ LGDSVDAGNHPAVALRTDGDKVQINKVNILGRQNTFFVTNSGVQNRLQTDRQPRTLVT
+ NSYIEGDVDMVSGRGAVVFDNTNFQVVNSRTQQEAYVFAPATLSNIYYGFLAINSRFS
+ ASGDGVAQLGRSLDVDANTNGQVVIRDSVINEGFNIAKPWADAVISKRPFAGNTGTVD
+ DKGEVQRNLNDTNYNRMWEYNNRGPGSKVVTEPKQ"
+ misc_feature 2076625..2077884
+ /locus_tag="SARI_02141"
+ /note="acyl-CoA thioesterase; Provisional; Region:
+ PRK10531"
+ /db_xref="CDD:236709"
+ misc_feature 2076850..>2077566
+ /locus_tag="SARI_02141"
+ /note="putative pectinesterase; Region: PLN02432; cl01911"
+ /db_xref="CDD:242775"
+ gene 2078327..2079670
+ /locus_tag="SARI_02142"
+ CDS 2078327..2079670
+ /locus_tag="SARI_02142"
+ /inference="protein motif:Gene3D:IPR011990"
+ /inference="protein motif:HMMPfam:IPR007655"
+ /inference="similar to AA sequence:REFSEQ:ZP_00135430.2"
+ /note="'COG: NOG10127 non supervised orthologous group;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571161.1"
+ /db_xref="GI:161504049"
+ /db_xref="InterPro:IPR007655"
+ /db_xref="InterPro:IPR011990"
+ /translation="MKIITFMRLKPGKPPAMVSFIFLLFSTFTSAKEQTLETGNLNNK
+ LTHYLISNNSVAVKNILQTCGECSQFIDPLLLEWANGILARQEKNYAESIRHYRKVIS
+ VHPDWYSARLQLATVLYLNKDILSAEAQLRKLRSESLPEEAAVLIDSFIAKIQKTDNW
+ AFRGGFTYLNEKNINNAPASGRSIGRWKSEKPQSGKGVMFWGEAEKTFSLPDNLFGIT
+ RLATSGKVYKNNHSYDELDGSIGLGFGYRNIDTTILLLPFYEKSYYGGGKKSEKGLKP
+ YSDTRGFGVETTLQLSNRWRLYSDVKLGKNEYKKKTYLNGYRYSLNETLIYFPDSRQY
+ ISAGLGYSMLRTEEKDSSFNKAAFRTGWMYEWNGGVSTLLQAAYGHKKYLAGDFWGIK
+ QINHEYNTSVTVWHRDIYFFGITPKITWSYQRTDSNHPFHDTERNRLLLSFSKYF"
+ misc_feature 2078561..2078740
+ /locus_tag="SARI_02142"
+ /note="Tetratricopeptide repeat; Region: TPR_16;
+ pfam13432"
+ /db_xref="CDD:222123"
+ misc_feature 2078567..>2078728
+ /locus_tag="SARI_02142"
+ /note="Tetratricopeptide repeat domain; typically contains
+ 34 amino acids
+ [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
+ X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
+ a variety of organisms including bacteria, cyanobacteria,
+ yeast, fungi; Region: TPR; cd00189"
+ /db_xref="CDD:238112"
+ misc_feature order(2078567..2078569,2078603..2078605,2078615..2078617,
+ 2078624..2078626,2078669..2078671,2078705..2078707,
+ 2078717..2078719,2078726..2078728)
+ /locus_tag="SARI_02142"
+ /note="TPR motif; other site"
+ /db_xref="CDD:238112"
+ misc_feature 2078747..2079667
+ /locus_tag="SARI_02142"
+ /note="Protein of unknown function (DUF560); Region:
+ DUF560; pfam04575"
+ /db_xref="CDD:218155"
+ gene 2079914..2080801
+ /locus_tag="SARI_02143"
+ CDS 2079914..2080801
+ /locus_tag="SARI_02143"
+ /inference="similar to AA sequence:INSD:EAY42822.1"
+ /note="'COG: COG1020 Non-ribosomal peptide synthetase
+ modules and related proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571162.1"
+ /db_xref="GI:161504050"
+ /translation="MTTEATEATEATEATEATEATEATEATEATEATEATEATEATET
+ TLPNKPIILAPVNETRISEVKYNTGTMLTRTVNDTDSTMLHKSNTVQEPDAYDLRMTD
+ GEVIVDIKPLNTGDPTDYRELASKNLSILRDKSGEPVGFYGIVETYTSETTRNLSGKE
+ KYGRVDYIVAMNGEEKKLPSLAADYTGKVYYDQEQASGKEADISLRYEDRQVTGTIID
+ KTRPHFNLAIDTRKPHDVDEDGSFMAELVGTNDRADHKMHGYIDGGFYGKDGEIVAGS
+ IRSRDDDSWGGVFGGEKQE"
+ misc_feature <2080412..2080795
+ /locus_tag="SARI_02143"
+ /note="Transferrin binding protein-like solute binding
+ protein; Region: Lipoprotein_5; pfam01298"
+ /db_xref="CDD:216420"
+ gene complement(2080977..2081324)
+ /locus_tag="SARI_02144"
+ CDS complement(2080977..2081324)
+ /locus_tag="SARI_02144"
+ /inference="protein motif:Gene3D:IPR000259"
+ /inference="protein motif:superfamily:IPR008966"
+ /inference="similar to AA sequence:INSD:ABG71753.1"
+ /note="'COG: COG3539 P pilus assembly protein, pilin FimA;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571163.1"
+ /db_xref="GI:161504051"
+ /db_xref="InterPro:IPR000259"
+ /db_xref="InterPro:IPR008966"
+ /translation="MPGGNLNLQLKCQDGIDVHATLTDATDTSNQSPVLSLDKTSTVR
+ GVGLKIYKDDSPEALRFGPDSSVKGNINQWQFSTYRGEMNPAVSLNINYIRTGEIQTG
+ TVQAISTITFSYQ"
+ misc_feature complement(2080980..>2081306)
+ /locus_tag="SARI_02144"
+ /note="Fimbrial protein; Region: Fimbrial; pfam00419"
+ /db_xref="CDD:215909"
+ gene complement(2081388..2081702)
+ /locus_tag="SARI_02145"
+ CDS complement(2081388..2081702)
+ /locus_tag="SARI_02145"
+ /note="'Psort location: vesicles of secretory system,
+ score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571164.1"
+ /db_xref="GI:161504052"
+ /translation="MTFTIADSQESGFGEGVEMKGNNLTDVIPPNGRWYLVPRMGASI
+ RIGVIALGRLSPGWINIPSVHVGNFSVISSNRGVNSLGGSSFIILDGFSFFVKTKTCS
+ LS"
+ gene 2081944..2082261
+ /locus_tag="SARI_02146"
+ CDS 2081944..2082261
+ /locus_tag="SARI_02146"
+ /inference="protein motif:HMMPfam:IPR002514"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:INSD:AAW51749.1"
+ /note="'KEGG: rha:RHA1_ro08393 0.0066 transposase;
+ COG: COG2963 Transposase and inactivated derivatives;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571165.1"
+ /db_xref="GI:161504053"
+ /db_xref="InterPro:IPR002514"
+ /db_xref="InterPro:IPR009057"
+ /translation="MIFSPQHKTGDLMNKKTKRTFTPEFRLECAQLIVDKGYPYRQAS
+ EAMNVGSTTLESWVRQIRRERQGITPSATPITPDQQRIRELEKQVRRLEEQNTILKKL
+ PRS"
+ misc_feature 2081980..>2082249
+ /locus_tag="SARI_02146"
+ /note="Transposase and inactivated derivatives [DNA
+ replication, recombination, and repair]; Region: COG2963"
+ /db_xref="CDD:225511"
+ misc_feature 2081986..2082216
+ /locus_tag="SARI_02146"
+ /note="Transposase; Region: HTH_Tnp_1; cl17663"
+ /db_xref="CDD:248217"
+ gene complement(2082167..2082598)
+ /locus_tag="SARI_02148"
+ CDS complement(2082167..2082598)
+ /locus_tag="SARI_02148"
+ /inference="similar to AA sequence:INSD:ABC42284.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571166.1"
+ /db_xref="GI:161504055"
+ /translation="MLLTDIFVLMFSGLTTAQVQIFHQTPGTVTAHRDAVLGQHFSQS
+ TRACRATALVPRSAYFAVQPDAHRINGIALFSPVPVTATVYFQNGTKADNRVVVTQSG
+ SYREPFSESDIKSAVAFLISYFVPPDGEPAFPARGYVAGLE"
+ gene 2082398..2082760
+ /locus_tag="SARI_02147"
+ CDS 2082398..2082760
+ /locus_tag="SARI_02147"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:REFSEQ:ZP_00714857.1"
+ /note="'COG: COG2801 Transposase and inactivated
+ derivatives;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571167.1"
+ /db_xref="GI:161504054"
+ /db_xref="InterPro:IPR012337"
+ /translation="MRVRLYSEIRRAWNQSRGSAGARTLAEMLTQNGVPMSRYRAGRL
+ MKYLNLSSCQPGKHQYKNVRQEHTCLPNLLERQFAVPEPDRVWCGDITYIWAGNRWCY
+ PADAGIDDLIWGVKENWC"
+ misc_feature 2082401..2082571
+ /locus_tag="SARI_02147"
+ /note="HTH-like domain; Region: HTH_21; pfam13276"
+ /db_xref="CDD:222019"
+ gene 2082723..2083325
+ /locus_tag="SARI_02149"
+ CDS 2082723..2083325
+ /locus_tag="SARI_02149"
+ /inference="similar to AA sequence:INSD:ABG56787.1"
+ /note="'COG: COG3547 Transposase and inactivated
+ derivatives;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571168.1"
+ /db_xref="GI:161504056"
+ /translation="MTSFGVLKRIGVECTGTYGSGLLRYCQNAGLAVLEVTAPDRMER
+ HKRGKSDTIDAECAAHAAFSGIRTVTPKTRDGMIESLRVLKTCRKTAISARRVALQII
+ HSNIISAPDELREQLRNMTRMQLIRTLGFSRPDASEYHNVTNIYRIALKSLARRYLEL
+ HDETSDLDVLIAAIVDELAPELIKRNGIRKRFAVADHCRR"
+ misc_feature <2082747..2083007
+ /locus_tag="SARI_02149"
+ /note="Transposase; Region: DEDD_Tnp_IS110; pfam01548"
+ /db_xref="CDD:216564"
+ gene 2083699..2084136
+ /locus_tag="SARI_02150"
+ CDS 2083699..2084136
+ /locus_tag="SARI_02150"
+ /inference="similar to AA sequence:INSD:AAL19840.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571169.1"
+ /db_xref="GI:161504057"
+ /translation="MAIPNQTKHESARKLPGYYRINSRWENRRRRPDDDVFLEVTVTT
+ DKIIQAENTFIRWLKTTEKGTVSLDNKKVTCWYCGGVWLHYTVNINVISLYLHSSGED
+ AFDSLADCTNEIAQLLYQNNPDVSIRWTEHPHRRKYLKETTGT"
+ gene complement(2084399..2085610)
+ /locus_tag="SARI_02151"
+ CDS complement(2084399..2085610)
+ /locus_tag="SARI_02151"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="similar to AA sequence:REFSEQ:NP_943369.1"
+ /note="'KEGG: tpe:Tpen_1086 0.0079 proton-translocating
+ NADH-quinone oxidoreductase, chain M;
+ COG: NOG06795 non supervised orthologous group;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571170.1"
+ /db_xref="GI:161504058"
+ /db_xref="InterPro:IPR011701"
+ /translation="MTSLEIAETPQKPLSCWPLAFSAGLLGVGQNGLLVAIPVLVIQT
+ NLSLSIWAALLMLGSMLFLPSSPWWGKQIARVGSKPVVLWALGGYGASFTLLGLGSVL
+ MATNTVTTAVGLGILIIARIVYGLTVSAMVPACQVWALQRAGEGNRMTALATISAGLS
+ CGRLFGPLCAAAMLAIHPLAPMGLLIAAPLLALLMLLLLPGMPPQSAAERKSATLRLN
+ CLPYLLCALLLAAAVSMMQLGLSPALARQFATDTAAISHQVAWLLGLAAVAALIAQFG
+ VLRPQRLTPIALLLSAGALMMCGLAIMLTGQLWLFYLGCAVLSFGAALATPAYQLLLN
+ DKLTDGAGAGWIATSHTLGYGLCALLVPLVSKTGAAAGLIMVAFFVAVLFTVVSGFIW
+ RSRYRSHCSTI"
+ misc_feature complement(<2085080..2085505)
+ /locus_tag="SARI_02151"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature complement(<2085083..2085499)
+ /locus_tag="SARI_02151"
+ /note="Major Facilitator Superfamily; Region: MFS_1;
+ pfam07690"
+ /db_xref="CDD:219516"
+ unsure 2085617..2085685
+ /note="Sequence derived from one plasmid subclone"
+ gene 2085686..2087467
+ /locus_tag="SARI_02152"
+ CDS 2085686..2087467
+ /locus_tag="SARI_02152"
+ /inference="protein motif:HMMPfam:IPR007310"
+ /inference="similar to AA sequence:INSD:AAR07718.1"
+ /note="'KEGG: ecc:c3627 1.1e-283 iucA; iucA protein
+ K03894;
+ COG: COG4264 Siderophore synthetase component;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571171.1"
+ /db_xref="GI:161504059"
+ /db_xref="InterPro:IPR007310"
+ /translation="MRNIICKIRIIIMYGICLIMTLPTKTPALDVAAQCFLNSLVRET
+ KDWRQTEYQPTELIIPLGEQQALHFRVAYFSPTQHHRFEFPARLVTASGSQPVDFATL
+ SRLIVDKLQHQLLLPATSCETFHQRVMESHAHTQQAIDARHDWAALREKALDFGEAEQ
+ ALLVGHAFHPAPKSHEPFTQQEAERYLPDFAPQFPLRWFTVDKTQIAGESLHLNLQQR
+ LTRFAVENVPQLLNELSDTQWLFPQHPWQGEYLLQQEWCQELVAKGLIKDLGEAGAPW
+ IPTTSSRSLYCSTSRDMIKFSLSVRLTNSVRTLSVKEVKRGMRLARLAQTDNWQRLQA
+ RFPTFRVMQEDGWAGLRDLHGNIMQESLFALRENLLVNQPQNQTNVLVSLTQAAPDGG
+ DSLLVAAVKRLSVRLGITAQQAAHAWVDAYCQQVLKPLFTAEADYGLVLLAHQQNILV
+ QMLQDLPVGLIYRDCQGSAFMPHAADWLDTIGEAQAENIFTREQLLRYFPYYLLVNST
+ FSVTAALGAAGLDSETSLMARVRTFLAEVRDQVTHKTCLNYVLESPYWNVKGNFFCYL
+ NDHNENTIVDPSVIYFDFANPLLAQEG"
+ misc_feature 2085791..2087449
+ /locus_tag="SARI_02152"
+ /note="Siderophore synthetase component [Secondary
+ metabolites biosynthesis, transport, and catabolism];
+ Region: RhbC; COG4264"
+ /db_xref="CDD:226715"
+ misc_feature 2086139..2086843
+ /locus_tag="SARI_02152"
+ /note="IucA / IucC family; Region: IucA_IucC; pfam04183"
+ /db_xref="CDD:217946"
+ misc_feature 2086931..2087407
+ /locus_tag="SARI_02152"
+ /note="Ferric iron reductase FhuF-like transporter;
+ Region: FhuF; pfam06276"
+ /db_xref="CDD:218968"
+ gene 2087468..2088415
+ /locus_tag="SARI_02153"
+ CDS 2087468..2088415
+ /locus_tag="SARI_02153"
+ /inference="similar to AA sequence:REFSEQ:NP_943367.1"
+ /note="'KEGG: sfl:SF3716 4.7e-157 iucB; IucB K03896;
+ COG: COG1670 Acetyltransferases, including N-acetylases of
+ ribosomal proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571172.1"
+ /db_xref="GI:161504060"
+ /translation="MSKANIVHSGYGLHCEKLDKPLDLSWSRDNSVVLHWPGPVPSGW
+ LRDALDQIFIVAPQISAVVLPYAEWHEDSQALTLFGQVKSDIIHRAAFWQLPLWLSSP
+ ANLASGEMVFDAEREIYFPQRAPRPQGEVYRRYDPRVRKTLSLRVADPVLDAERFTRW
+ MNDPRVEYFWEQSGSLEVQTAYLERQLSDKHAFPLIGCFDDRPFSYFEIYWAAEDRIG
+ RHYSWHPFDRGLHLLVGEQQWRGAHYVRSWLRGLTHYLLLDEPRTQRTVLEPRADNQR
+ LFRHLEPAGYRTIKEFDFPHKRSRMVMAERHNFFMEVGL"
+ misc_feature 2087900..2088373
+ /locus_tag="SARI_02153"
+ /note="Acetyltransferase (GNAT) domain; Region:
+ Acetyltransf_8; pfam13523"
+ /db_xref="CDD:222196"
+ misc_feature 2087903..2088046
+ /locus_tag="SARI_02153"
+ /note="Siderophore biosynthesis protein domain; Region:
+ AlcB; smart01006"
+ /db_xref="CDD:198074"
+ gene 2088415..2090148
+ /locus_tag="SARI_02154"
+ CDS 2088415..2090148
+ /locus_tag="SARI_02154"
+ /inference="protein motif:HMMPfam:IPR007310"
+ /note="'KEGG: ecc:c3625 1.1e-294 iucC; iucC protein
+ K03895;
+ COG: COG4264 Siderophore synthetase component;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571173.1"
+ /db_xref="GI:161504061"
+ /db_xref="InterPro:IPR007310"
+ /translation="MNRKDWDFVNRQLAAKMLAELEYEQVFHAESQGDDRYCINLPDA
+ KWHFSAERGIWGWLWIDAHTLRCADEPVLAQTLLMQLKPVLSMSDATVAEHMQDLYAT
+ LLGDLQLLRARRGLTASDLIDLDADRLQCLLSGHPKFAFNKGRRGWGKAALERYAPEY
+ ANTFRLHWLAVKREHMVWRCDSKLDIQQLLTAAMDPQEFARFNQVWQENGLDHDWLPL
+ PVHPWQWQQKIALDFIADLAEGRMVSLGEFGDFWLAQQSLRTLTNASRQGGLDIKLPL
+ TIYNTSCYRGIPGKYISAGPLASRWLQQIFATDATLVQSGAVILGEPAAGYVSHEGYA
+ ALAQAPYRYQEMLGVIWRENPRCWLKPDESPILMATLMECDENNQPLIGAYIARSGLD
+ AETWLTQLFQVVVVPLYHLLCRYGVALIAHGQNITLAMKDGVPQRVLLKDFQGDMRLV
+ KDEFPEMNSLPQEVRDVTARLSADYLIHDLQTGHFVTVLRFVSPLVARLGVPERRFYQ
+ LLAAVLSDYMQEHPQMSARFALFSLFKPQIIRVVLNPVKLTWPDQDGGSRMLPNYLED
+ LQNPLWLATRN"
+ misc_feature 2088415..2090127
+ /locus_tag="SARI_02154"
+ /note="Siderophore synthetase component [Secondary
+ metabolites biosynthesis, transport, and catabolism];
+ Region: RhbC; COG4264"
+ /db_xref="CDD:226715"
+ misc_feature 2088763..2089539
+ /locus_tag="SARI_02154"
+ /note="IucA / IucC family; Region: IucA_IucC; pfam04183"
+ /db_xref="CDD:217946"
+ misc_feature 2089594..2090061
+ /locus_tag="SARI_02154"
+ /note="Ferric iron reductase FhuF-like transporter;
+ Region: FhuF; pfam06276"
+ /db_xref="CDD:218968"
+ gene 2090152..2091486
+ /locus_tag="SARI_02155"
+ CDS 2090152..2091486
+ /locus_tag="SARI_02155"
+ /inference="similar to AA sequence:REFSEQ:NP_943365.1"
+ /note="'KEGG: ssn:SSO_3604 2.4e-201 iucD;
+ lysine:N6-hydroxylase K03897;
+ COG: COG3486 Lysine/orniTHIne N-monooxygenase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571174.1"
+ /db_xref="GI:161504062"
+ /translation="MTRTVDFIGVGIGPFNLSIAALSHQIEGLSCRFFDERQHFAWHP
+ GMLVPDCHMQTVFLKDLVSAVAPTSPYSFVNYLVKRKKFYRFLTTELRTVSRDEFSDY
+ LRWAAEGMNNLHFNHAVESVDFDEKRQLFVVQTSQGESVARNICLGIGKQPHLPPCVK
+ AVTQTCFHASEMSLRQPDLGGKRVTIVGGGQSGADLFLNALRGEWGDAAEISWVSRRN
+ NFNALDEAAFANEYFTPEYVSGFVGLNESARQKMLDEQKMTSDGITADSLLTIYRELY
+ HRFEVLGQPRNTRLLPSRSVTVLESRGQSWQLLLEHHLDNGYDTLESDVVIFATGYRP
+ ALPQILSPLMSRIAMRDECNFKVRDDFTLEWNGPKDNNIFAVNASMQTHGIAEPQLSL
+ MAWRSARILNRALGRDLFDLSTPPALIQWRSGSREKPQPEAASLTRYTASLG"
+ misc_feature 2090152..2091444
+ /locus_tag="SARI_02155"
+ /note="Lysine/ornithine N-monooxygenase [Secondary
+ metabolites biosynthesis, transport, and catabolism];
+ Region: IucD; COG3486"
+ /db_xref="CDD:226017"
+ misc_feature <2090434..2090802
+ /locus_tag="SARI_02155"
+ /note="NAD(P)-binding Rossmann-like domain; Region:
+ NAD_binding_8; cl17500"
+ /db_xref="CDD:248054"
+ gene 2091512..2093713
+ /locus_tag="SARI_02156"
+ CDS 2091512..2093713
+ /locus_tag="SARI_02156"
+ /inference="protein motif:HMMPfam:IPR000531"
+ /inference="protein motif:HMMPfam:IPR012910"
+ /inference="protein motif:HMMTigr:IPR010105"
+ /inference="protein motif:ScanRegExp:IPR010916"
+ /note="'KEGG: shn:Shewana3_3063 0.0063
+ phosphatidylglycerophosphatase K01094;
+ COG: COG1629 Outer membrane receptor proteins, mostly Fe
+ transport;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571175.1"
+ /db_xref="GI:161504063"
+ /db_xref="InterPro:IPR000531"
+ /db_xref="InterPro:IPR010105"
+ /db_xref="InterPro:IPR010916"
+ /db_xref="InterPro:IPR012910"
+ /translation="MMISKKYTLWALNPLLLAMMAPAVAQQADDETLVVSANRSNRTV
+ AEMAQTTWVIENAELEQQIQGGKELKDALAQLIPGLDVSSQSRTNYGMNVRGRPLVVL
+ VDGVRLNSSRTDSRQLDSIDPFNIDHIEVISGATALYGGGSTGGLINIVTKKGQPETQ
+ MEFEAGTKSGFNSSKDHDERIASAISGGNDHISGRVSVAYQKFGGWFDGNGDATLLDN
+ TQTGLQYSDRLDIMGTGTLNIDETQQLQLITQYYKSQGDEDYGLNLGKDFSAISGSST
+ PYVSKGLHSDRIPGTERHLISLQYSNSDFFSQELVGQVYYRDESLLFYPFPTVNANKQ
+ ATAFSSSQQDTDQYGMKLTLNSKPLDGWQITYGLDADHERFTSNQMFFNLAQSSASGG
+ LNNQKIYTTGRYPSYDITNLAAFLQSSYDINDIFTLSGGLRYQYTENKIDNFIGYAQQ
+ QQIAAGKATSADAIPGGSVDYDNVLFNAGLLMHITERQQAWFNFSQGVELPDPGKYYG
+ RGTYGAAVNGHLPLTNSVNVDDSKLEGVKVDSYELGWRFTGDNLRTQISTYYSISDKS
+ VVANKDLTISVVDDKRRIYGVEGAVDYLIPDTDWSTGANFNVLKTESKVNGSWQKYDV
+ KLASPSKATAYIGWAPDPWSLRVQSTTSFEVSDAKGYSIDGYTTVDLLGSYQLPVGKL
+ SFSVENLFDRDYTTVWGQRAPLYYSPGYGPASLYDYKGRGRTFGLNYSVLF"
+ misc_feature 2091647..2093710
+ /locus_tag="SARI_02156"
+ /note="TonB-dependent siderophore receptor; Region:
+ TonB-siderophor; TIGR01783"
+ /db_xref="CDD:233575"
+ misc_feature 2091659..2093710
+ /locus_tag="SARI_02156"
+ /note="TonB dependent/Ligand-Gated channels are created by
+ a monomeric 22 strand (22,24) anti-parallel beta-barrel.
+ Ligands apparently bind to the large extracellular loops.
+ The N-terminal 150-200 residues form a plug from the
+ periplasmic end of barrel; Region: ligand_gated_channel;
+ cd01347"
+ /db_xref="CDD:238657"
+ misc_feature order(2091659..2091688,2091725..2091754,2091785..2091802,
+ 2091812..2091835,2091878..2091910,2091941..2091967)
+ /locus_tag="SARI_02156"
+ /note="N-terminal plug; other site"
+ /db_xref="CDD:238657"
+ misc_feature order(2092472..2092474,2092538..2092540)
+ /locus_tag="SARI_02156"
+ /note="ligand-binding site [chemical binding]; other site"
+ /db_xref="CDD:238657"
+ gene complement(2093846..2094841)
+ /locus_tag="SARI_02157"
+ CDS complement(2093846..2094841)
+ /locus_tag="SARI_02157"
+ /inference="similar to AA sequence:REFSEQ:NP_459764.1"
+ /note="catalyzes the hydrolysis of 6-phosphogluconolactone
+ to 6-phosphogluconate"
+ /codon_start=1
+ /transl_table=11
+ /product="6-phosphogluconolactonase"
+ /protein_id="YP_001571176.1"
+ /db_xref="GI:161504064"
+ /translation="MKQTVYTASPESQQIHVWSLNHEGMLTLVQVVDVPGQVQPMVVS
+ PDKRYLYVGVRPEFRVLAYRIAPDDGALTFATESALPGSPTHISTDHHGRFVFVGSYN
+ AGNVSVTRLQDGLPVELVDVVEGLDGCHSANITPDNRTLWVPALKQDRIALFTLSDDG
+ YLAAQEPAEVNTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKNPHGEIECVQTL
+ DMMPADFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSVEGFQPTETQ
+ PRGFNIDHHGKYLIAAGQKSHHIAVYEIAGAQGLLTEKGRYAVGQGPMWVVVNAY"
+ misc_feature complement(2093849..2094838)
+ /locus_tag="SARI_02157"
+ /note="6-phosphogluconolactonase; Provisional; Region:
+ PRK11028"
+ /db_xref="CDD:182912"
+ gene 2094963..2095823
+ /locus_tag="SARI_02158"
+ CDS 2094963..2095823
+ /locus_tag="SARI_02158"
+ /inference="protein motif:HMMPfam:IPR013200"
+ /inference="protein motif:HMMTigr:IPR000150"
+ /inference="protein motif:HMMTigr:IPR006379"
+ /inference="protein motif:ScanRegExp:IPR000150"
+ /inference="similar to AA sequence:INSD:AAL19722.1"
+ /note="'YbhA; catalyzes the dephosphorylation of pyridoxal
+ phosphate, fructose 1,6-bisphosphate, erythrose
+ 4-phosphate and p-nitrophenyl phosphate; purine and
+ pyrimidine nucleotides are secondary substrates;
+ phosphotransferase activity observed when using
+ monophosphates as phosphate donor; member of the haloacid
+ dehalogenase-like hydrolases superfamily'"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphotransferase"
+ /protein_id="YP_001571177.1"
+ /db_xref="GI:161504065"
+ /db_xref="InterPro:IPR000150"
+ /db_xref="InterPro:IPR006379"
+ /db_xref="InterPro:IPR013200"
+ /translation="MPTDGMITLNLEKIMTARVIALDLDGTLLTPQKTLLPSSLDALS
+ RAKEAGFQLIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAKTVLDADPMPVD
+ KALQLIDLLDEHQIHGLMYVDDAMLYERPTGHVVRTSRWAQTLPPEQRPTFTQVSSLA
+ QAARGVNAVWKFALTDEDIPRLQRFGQHVEQALGLECEWSWHDQVDISRQGNSKGKRL
+ TQWIEAQGGSMENVIAFGDNYNDISMLEAAGTGVAMGNADDAVKARANVVIGDNTTDS
+ IAKFIYTHLL"
+ misc_feature 2095005..2095820
+ /locus_tag="SARI_02158"
+ /note="pyridoxal phosphate (PLP) phosphatase; Provisional;
+ Region: PRK10530"
+ /db_xref="CDD:182523"
+ misc_feature 2095017..2095340
+ /locus_tag="SARI_02158"
+ /note="Haloacid dehalogenase-like hydrolases. The haloacid
+ dehalogenase-like (HAD) superfamily includes L-2-haloacid
+ dehalogenase, epoxide hydrolase, phosphoserine
+ phosphatase, phosphomannomutase, phosphoglycolate
+ phosphatase, P-type ATPase, and many others; Region:
+ HAD_like; cd01427"
+ /db_xref="CDD:119389"
+ misc_feature order(2095029..2095037,2095131..2095136)
+ /locus_tag="SARI_02158"
+ /note="active site"
+ /db_xref="CDD:119389"
+ misc_feature 2095029..2095046
+ /locus_tag="SARI_02158"
+ /note="motif I; other site"
+ /db_xref="CDD:119389"
+ misc_feature 2095131..2095133
+ /locus_tag="SARI_02158"
+ /note="motif II; other site"
+ /db_xref="CDD:119389"
+ misc_feature <2095614..2095724
+ /locus_tag="SARI_02158"
+ /note="Haloacid dehalogenase-like hydrolases. The haloacid
+ dehalogenase-like (HAD) superfamily includes L-2-haloacid
+ dehalogenase, epoxide hydrolase, phosphoserine
+ phosphatase, phosphomannomutase, phosphoglycolate
+ phosphatase, P-type ATPase, and many others; Region:
+ HAD_like; cd01427"
+ /db_xref="CDD:119389"
+ gene complement(2095824..2096882)
+ /gene="modC"
+ /locus_tag="SARI_02159"
+ CDS complement(2095824..2096882)
+ /gene="modC"
+ /locus_tag="SARI_02159"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMPfam:IPR005116"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR004606"
+ /inference="protein motif:HMMTigr:IPR011868"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="protein motif:superfamily:IPR008995"
+ /inference="similar to AA sequence:REFSEQ:YP_151189.1"
+ /note="Part of the ABC transporter complex modABC involved
+ in molybdenum import"
+ /codon_start=1
+ /transl_table=11
+ /product="molybdate transporter ATP-binding protein"
+ /protein_id="YP_001571178.1"
+ /db_xref="GI:161504066"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR004606"
+ /db_xref="InterPro:IPR005116"
+ /db_xref="InterPro:IPR008995"
+ /db_xref="InterPro:IPR011868"
+ /translation="MLELNFSQTLGTHCLTLNETLPASGITAIFGVSGAGKTSLINAI
+ SGLTRPQKGHIALNGRVLHDAENGICLTPEKRRIGYVFQDARLFPHYKVRGNLRYGMA
+ KSMAGQFDKLVSLLGIEALLDRLPGSLSGGEKQRVAIGRALLTAPELLLLDEPLASLD
+ IPRKRELLPYLQRLAREINIPMLYVSHSLDEILHLADKVMVLEDGQVKAFGPLEDVWG
+ SSVMHPWLPKEQQSSILKVSVLEHHPHYAMTALALGDQHLWVNKLNQPLQSTLRIRIQ
+ ASDVSLVLQPPQQTSIRNVLRAKVANCYDDNGQVEVQLEIGGRTLWARISPWARDELS
+ IKPGLWLYAQVKSVSITA"
+ misc_feature complement(2095827..2096882)
+ /gene="modC"
+ /locus_tag="SARI_02159"
+ /note="molybdate transporter ATP-binding protein;
+ Provisional; Region: modC; PRK11144"
+ /db_xref="CDD:182993"
+ misc_feature complement(2096250..2096882)
+ /gene="modC"
+ /locus_tag="SARI_02159"
+ /note="ATP-binding cassette transporter nucleotide-binding
+ domain; Region: ABC_ATPase; cl17201"
+ /db_xref="CDD:247755"
+ misc_feature complement(2096769..2096792)
+ /gene="modC"
+ /locus_tag="SARI_02159"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(order(2096322..2096324,2096421..2096426,
+ 2096634..2096636,2096766..2096774,2096778..2096783))
+ /gene="modC"
+ /locus_tag="SARI_02159"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(2096634..2096645)
+ /gene="modC"
+ /locus_tag="SARI_02159"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(2096469..2096498)
+ /gene="modC"
+ /locus_tag="SARI_02159"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(2096421..2096438)
+ /gene="modC"
+ /locus_tag="SARI_02159"
+ /note="Walker B; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(2096403..2096414)
+ /gene="modC"
+ /locus_tag="SARI_02159"
+ /note="D-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(2096316..2096336)
+ /gene="modC"
+ /locus_tag="SARI_02159"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(2095827..2096021)
+ /gene="modC"
+ /locus_tag="SARI_02159"
+ /note="molybdenum-pterin binding domain; Region: Mop;
+ TIGR00638"
+ /db_xref="CDD:233066"
+ gene complement(2096885..2097574)
+ /gene="modB"
+ /locus_tag="SARI_02160"
+ CDS complement(2096885..2097574)
+ /gene="modB"
+ /locus_tag="SARI_02160"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="protein motif:HMMTigr:IPR011867"
+ /inference="similar to AA sequence:INSD:AAX64686.1"
+ /note="part of ModCBA molybdate transporter; member of ABC
+ superfamily; inner membrane component; regulated by
+ repressor protein ModE"
+ /codon_start=1
+ /transl_table=11
+ /product="molybdate ABC transporter permease protein"
+ /protein_id="YP_001571179.1"
+ /db_xref="GI:161504067"
+ /db_xref="InterPro:IPR000515"
+ /db_xref="InterPro:IPR011867"
+ /translation="MILTDPEWQAVFLSLKVSSLAVLFSLPFGIFFAWLLVRCRFPGK
+ ALLDSVLHLPLVLPPVVVGYLLLVSMGRRGFIGQWLYDWFGLTFAFSWRGAVLAAAVM
+ SFPLMVRAIRLALEGVDIKLEQAARTLGAGRWRVFLTITLPLTLPGIIVGTVLAFARS
+ LGEFGATITFVSNIPGETRTIPSAMYTLIQTPGGESAAARLCVISIVLALISLLISEW
+ LARISRERTGR"
+ misc_feature complement(2096978..2097571)
+ /gene="modB"
+ /locus_tag="SARI_02160"
+ /note="ABC-type sulfate transport system, permease
+ component [Posttranslational modification, protein
+ turnover, chaperones]; Region: CysU; COG0555"
+ /db_xref="CDD:223629"
+ misc_feature complement(2096978..2097535)
+ /gene="modB"
+ /locus_tag="SARI_02160"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(2096981..2096986,2096993..2096998,
+ 2097026..2097031,2097068..2097073,2097080..2097091,
+ 2097110..2097112,2097119..2097124,2097164..2097166,
+ 2097215..2097217,2097224..2097229,2097239..2097241,
+ 2097245..2097250,2097257..2097259,2097263..2097265,
+ 2097269..2097274,2097374..2097376,2097380..2097385,
+ 2097392..2097421,2097425..2097436,2097464..2097466,
+ 2097479..2097484,2097491..2097496))
+ /gene="modB"
+ /locus_tag="SARI_02160"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(2097074..2097091,2097374..2097418))
+ /gene="modB"
+ /locus_tag="SARI_02160"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(2096996..2096998,2097026..2097028,
+ 2097035..2097037,2097071..2097073,2097287..2097289,
+ 2097374..2097376))
+ /gene="modB"
+ /locus_tag="SARI_02160"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(2097143..2097145,2097155..2097160,
+ 2097176..2097214))
+ /gene="modB"
+ /locus_tag="SARI_02160"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene complement(2097574..2098347)
+ /gene="modA"
+ /locus_tag="SARI_02161"
+ CDS complement(2097574..2098347)
+ /gene="modA"
+ /locus_tag="SARI_02161"
+ /inference="protein motif:BlastProDom:IPR011587"
+ /inference="protein motif:HMMPfam:IPR006059"
+ /inference="protein motif:HMMTigr:IPR005950"
+ /inference="protein motif:ScanRegExp:IPR010916"
+ /inference="similar to AA sequence:REFSEQ:YP_215766.1"
+ /note="with ModCB is involved in the high-affinity
+ transport of molybdate"
+ /codon_start=1
+ /transl_table=11
+ /product="molybdate transporter periplasmic protein"
+ /protein_id="YP_001571180.1"
+ /db_xref="GI:161504068"
+ /db_xref="InterPro:IPR005950"
+ /db_xref="InterPro:IPR006059"
+ /db_xref="InterPro:IPR010916"
+ /db_xref="InterPro:IPR011587"
+ /translation="MAHSWLRLVAGATLSFAIAGHALADEGKITVFAAASLTNAMQDI
+ AAEYKKEKNVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAADKKAVDTTTRE
+ TLLGNSLVVVAPKASEQKPFTIDNKTDWIRLLNGGRLAVGDPQHVPAGIYAKEALQKL
+ GAWQTLEPKLAPGEDVRGALALVERNEAPLGIVYGSDAVASKGVNVVATFPEDSHKKV
+ EYPIAIVDGHKNATVSAFYDYLKGPQASAIFKRYGFTTK"
+ misc_feature complement(2097577..2098347)
+ /gene="modA"
+ /locus_tag="SARI_02161"
+ /note="molybdate transporter periplasmic protein;
+ Provisional; Region: modA; PRK10677"
+ /db_xref="CDD:182641"
+ misc_feature complement(2097595..2098242)
+ /gene="modA"
+ /locus_tag="SARI_02161"
+ /note="Bacterial periplasmic transport systems use
+ membrane-bound complexes and substrate-bound,
+ membrane-associated, periplasmic binding proteins (PBPs)
+ to transport a wide variety of substrates, such as, amino
+ acids, peptides, sugars, vitamins and inorganic...;
+ Region: PBPb; cd00134"
+ /db_xref="CDD:238078"
+ misc_feature complement(order(2097766..2097768,2097904..2097906,
+ 2098072..2098074,2098159..2098161))
+ /gene="modA"
+ /locus_tag="SARI_02161"
+ /note="substrate binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:238078"
+ misc_feature complement(order(2097787..2097789,2097805..2097807,
+ 2097817..2097819))
+ /gene="modA"
+ /locus_tag="SARI_02161"
+ /note="membrane-bound complex binding site; other site"
+ /db_xref="CDD:238078"
+ misc_feature complement(2097685..2097702)
+ /gene="modA"
+ /locus_tag="SARI_02161"
+ /note="hinge residues; other site"
+ /db_xref="CDD:238078"
+ gene complement(2098514..2098765)
+ /locus_tag="SARI_02162"
+ CDS complement(2098514..2098765)
+ /locus_tag="SARI_02162"
+ /inference="similar to AA sequence:REFSEQ:YP_215765.1"
+ /note="'COG: NOG17580 non supervised orthologous group;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571181.1"
+ /db_xref="GI:161504069"
+ /translation="MTEKRGSAKPTAQKGSAFLCYAVKIQKGLYLELPMLELLKSLVF
+ AVIMVPVVMAIILGLVYGLGEVFNIFSGIGQKDQSRQNR"
+ misc_feature complement(2098532..>2098597)
+ /locus_tag="SARI_02162"
+ /note="Protein of unknown function (DUF2592); Region:
+ DUF2592; pfam10766"
+ /db_xref="CDD:119286"
+ gene 2098792..2099580
+ /locus_tag="SARI_02163"
+ CDS 2098792..2099580
+ /locus_tag="SARI_02163"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="protein motif:HMMPfam:IPR005116"
+ /inference="protein motif:HMMTigr:IPR003725"
+ /inference="protein motif:HMMTigr:IPR004606"
+ /inference="protein motif:superfamily:IPR008995"
+ /inference="similar to AA sequence:INSD:AAX64683.1"
+ /note="represses the modABCD operon and activates the
+ moaABCD and napFDAGHBC operons"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional regulator ModE"
+ /protein_id="YP_001571182.1"
+ /db_xref="GI:161504070"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR003725"
+ /db_xref="InterPro:IPR004606"
+ /db_xref="InterPro:IPR005116"
+ /db_xref="InterPro:IPR008995"
+ /db_xref="InterPro:IPR011991"
+ /translation="MQAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGIS
+ YKSAWDAINDMNQLSEHMLVERATGGKGGGGAVLTRYGQRLIQLYDLLGQIQQKAFDV
+ LSDDDALPLDSLLAAISRFSLQTSARNQWFGTITARDRVQVQQHVDVLLADGKTRLKV
+ ALTAQSGERLGLEEGKEVLILLKAPWVGITQDATIARAADNQLSGTISHIERSAEQCE
+ VLMALPDGQTLCATIPAADAATLKEGDDVIAWFNADSVIIATLC"
+ misc_feature 2098792..2099577
+ /locus_tag="SARI_02163"
+ /note="DNA-binding transcriptional regulator ModE;
+ Provisional; Region: PRK10676"
+ /db_xref="CDD:182640"
+ misc_feature 2098792..2099184
+ /locus_tag="SARI_02163"
+ /note="N-terminal domain of molybdenum-binding protein
+ [General function prediction only]; Region: ModE; COG2005"
+ /db_xref="CDD:224916"
+ misc_feature 2099158..2099367
+ /locus_tag="SARI_02163"
+ /note="molybdenum-pterin binding domain; Region: Mop;
+ TIGR00638"
+ /db_xref="CDD:233066"
+ misc_feature 2099386..2099565
+ /locus_tag="SARI_02163"
+ /note="TOBE domain; Region: TOBE; pfam03459"
+ /db_xref="CDD:202645"
+ gene 2099648..2101120
+ /locus_tag="SARI_02164"
+ CDS 2099648..2101120
+ /locus_tag="SARI_02164"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="similar to AA sequence:REFSEQ:YP_215763.1"
+ /note="contains 2 ATP-binding cassettes; involved in the
+ transport of molybdenum"
+ /codon_start=1
+ /transl_table=11
+ /product="putative molybdenum transport ATP-binding
+ protein ModF"
+ /protein_id="YP_001571183.1"
+ /db_xref="GI:161504071"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MSSLQISQGTFRLSDTKTLHLDSLTLNAGDSWAFVGANGSGKSS
+ LARALAGELPLLKGERQCRFTRITRLSFEQLQKLVSDEWQRNNTDMLSPGEEDTGRTT
+ AEIIQDDVHDPARCAMLAQQFGISALLTRRFKYLSTGETRKALLCQALMSEPELLILD
+ EPFDGLDVTSRQQLAQRLATLNQAGITLALVLNRFDEIPDFVQFAGVLADCTLTETGT
+ TSELLQRALVAQLAHSERLTDVQLPEPDEPSVHHALSDDEPRIVLNDGVISYNDRPIL
+ YHLSWRVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRRRGSGETIWDI
+ KKHIGYVSSSLHLDYRVSTTVRNVILSGYFDSIGIYRAVSDRQQKLAQQWLDILGIDN
+ RTADAPFHSLSWGQQRLALIVRALVKHPTILILDEPLQGLDPLNRQLVRRFVDVLLRQ
+ GETQLLFVSHHAEDAPACITHRLEFLPDGDHYLYRQSALA"
+ misc_feature 2099648..2101117
+ /locus_tag="SARI_02164"
+ /note="putative molybdenum transport ATP-binding protein
+ ModF; Provisional; Region: PRK10938"
+ /db_xref="CDD:182852"
+ misc_feature 2099687..2100277
+ /locus_tag="SARI_02164"
+ /note="ATP-binding cassette transporter nucleotide-binding
+ domain; Region: ABC_ATPase; cl17201"
+ /db_xref="CDD:247755"
+ misc_feature 2099753..2099776
+ /locus_tag="SARI_02164"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature order(2099762..2099767,2099771..2099779,2099897..2099899,
+ 2100125..2100130,2100224..2100226)
+ /locus_tag="SARI_02164"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213179"
+ misc_feature 2099888..2099899
+ /locus_tag="SARI_02164"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213179"
+ misc_feature 2100053..2100082
+ /locus_tag="SARI_02164"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213179"
+ misc_feature 2100113..2100130
+ /locus_tag="SARI_02164"
+ /note="Walker B; other site"
+ /db_xref="CDD:213179"
+ misc_feature 2100137..2100148
+ /locus_tag="SARI_02164"
+ /note="D-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature 2100212..2100232
+ /locus_tag="SARI_02164"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213179"
+ misc_feature 2100434..2101027
+ /locus_tag="SARI_02164"
+ /note="ATP-binding cassette transporter nucleotide-binding
+ domain; Region: ABC_ATPase; cl17201"
+ /db_xref="CDD:247755"
+ misc_feature 2100524..2100547
+ /locus_tag="SARI_02164"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature order(2100533..2100538,2100542..2100550,2100674..2100676,
+ 2100923..2100928,2101025..2101027)
+ /locus_tag="SARI_02164"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213179"
+ misc_feature 2100665..2100676
+ /locus_tag="SARI_02164"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213179"
+ misc_feature 2100851..2100880
+ /locus_tag="SARI_02164"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213179"
+ misc_feature 2100911..2100928
+ /locus_tag="SARI_02164"
+ /note="Walker B; other site"
+ /db_xref="CDD:213179"
+ misc_feature 2100935..2100946
+ /locus_tag="SARI_02164"
+ /note="D-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature 2101013..2101027
+ /locus_tag="SARI_02164"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213179"
+ gene complement(2101317..2101823)
+ /locus_tag="SARI_02166"
+ CDS complement(2101317..2101823)
+ /locus_tag="SARI_02166"
+ /inference="similar to AA sequence:REFSEQ:ZP_01572884.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571184.1"
+ /db_xref="GI:161504073"
+ /translation="MQIGEDLFYHQFTFAVGALRRAGRKTFDVRNFGLIAINGGGGAK
+ NKVFNVGRTHGADQPQRTVDVVVIVLQRPGDRFADGFQAGKVNHGIYSVIVQNFGYKR
+ FVANIAFDKGRVLTAQTFDNGQYAAFAVAEVIEDDDVMTILQQLHTGMTSYVTATTCN
+ QYSHNSLR"
+ misc_feature complement(2101683..>2101823)
+ /locus_tag="SARI_02166"
+ /note="2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol
+ hydroxylase; Reviewed; Region: ubiF; PRK08020"
+ /db_xref="CDD:181199"
+ gene 2101794..2102348
+ /locus_tag="SARI_02165"
+ CDS 2101794..2102348
+ /locus_tag="SARI_02165"
+ /inference="protein motif:HMMPfam:IPR001509"
+ /inference="protein motif:HMMTigr:IPR005886"
+ /inference="similar to AA sequence:REFSEQ:YP_215761.1"
+ /note="'KEGG: sec:SC0774 5.6e-99 galE; UDP-galactose
+ 4-epimerase K01784;
+ COG: COG1087 UDP-glucose 4-epimerase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571185.1"
+ /db_xref="GI:161504072"
+ /db_xref="InterPro:IPR001509"
+ /db_xref="InterPro:IPR005886"
+ /translation="MVEQILTDLQKAQPAWSIALLRYFNPVGAHPSGDMGEDPQGIPN
+ NLMPYIAQVAVGRRESLAVFGNDYPTEDGTGVRDYIHVMDLADGHIVAMEKLADKSGV
+ HIYNLGAGVGSSVLDVVNAFSKACGKPINYHFAPRRDGDLPAYWADAGKADRELNWHV
+ TRTLDEMAQDTWRWQSRHPQGYPD"
+ misc_feature <2101794..2102321
+ /locus_tag="SARI_02165"
+ /note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
+ NADB_Rossmann; cl09931"
+ /db_xref="CDD:245206"
+ gene 2102359..2103405
+ /locus_tag="SARI_02167"
+ CDS 2102359..2103405
+ /locus_tag="SARI_02167"
+ /inference="protein motif:BlastProDom:IPR011573"
+ /inference="protein motif:HMMPanther:IPR001937"
+ /inference="protein motif:HMMPfam:IPR005849"
+ /inference="protein motif:HMMPfam:IPR005850"
+ /inference="protein motif:HMMPIR:IPR001937"
+ /inference="protein motif:HMMTigr:IPR001937"
+ /inference="protein motif:ScanRegExp:IPR001937"
+ /inference="similar to AA sequence:REFSEQ:NP_459754.1"
+ /note="catalyzes the interconversion of UDP-galactose and
+ galactose-1-P with UDP-galactose and glucose-1-P"
+ /codon_start=1
+ /transl_table=11
+ /product="galactose-1-phosphate uridylyltransferase"
+ /protein_id="YP_001571186.1"
+ /db_xref="GI:161504074"
+ /db_xref="InterPro:IPR001937"
+ /db_xref="InterPro:IPR005849"
+ /db_xref="InterPro:IPR005850"
+ /db_xref="InterPro:IPR011573"
+ /translation="MTPFNPVDHPHRRYNPLTGQWVLVSPHRAKRPWQGAQETPSQQR
+ LPAHDPDCFLCAGNTRVTGDKNPDYQGTYVFTNDFAALMADTPDAPDSHDPLMRCQSA
+ RGTSRVICFSPDHSKTLPELSLPALTEIVRTWQEQTVELGKTYPWVQVFENKGAAMGC
+ SNPHPHGQIWANSFLPNEAEREDRLQKAYFAGQRSPMLVDYVQRELADGSRTVVETEH
+ WLAVVPYWAAWPFETLLLPKTHVRRITDLSDEQRDSLALALKKLTSRYDNLFQCSFPY
+ SMGWHGAPFNGEENVHWQLHAHFYPPLLRSATVRKFMVGYEMLAETQRDLTAEQAAER
+ LRAVSDIHFRESGV"
+ misc_feature 2102359..2103396
+ /locus_tag="SARI_02167"
+ /note="galactose-1-phosphate uridylyltransferase;
+ Provisional; Region: PRK11720"
+ /db_xref="CDD:236963"
+ misc_feature 2102389..2103372
+ /locus_tag="SARI_02167"
+ /note="Galactose-1-phosphate uridyl transferase (GalT):
+ This enzyme plays a key role in galactose metabolism by
+ catalysing the transfer of a uridine 5'-phosphoryl
+ group from UDP-galactose 1-phosphate. The structure of
+ E.coli GalT reveals that the enzyme...; Region: GalT;
+ cd00608"
+ /db_xref="CDD:238341"
+ misc_feature order(2102389..2102400,2102404..2102406,2102416..2102421,
+ 2102431..2102433,2102440..2102442,2102449..2102451,
+ 2102455..2102463,2102515..2102517,2102599..2102601,
+ 2102815..2102817,2102824..2102835,2102839..2102844,
+ 2102866..2102868,2102872..2102874,2102878..2102880,
+ 2102884..2102892,2102923..2102925,2102968..2102970,
+ 2102989..2102991,2103031..2103036,2103043..2103045,
+ 2103187..2103189,2103199..2103201,2103250..2103252,
+ 2103289..2103294,2103304..2103306)
+ /locus_tag="SARI_02167"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238341"
+ misc_feature order(2102587..2102592,2102815..2102817,2102833..2102835,
+ 2102839..2102841,2102860..2102862)
+ /locus_tag="SARI_02167"
+ /note="active site"
+ /db_xref="CDD:238341"
+ gene 2103408..2104556
+ /locus_tag="SARI_02168"
+ CDS 2103408..2104556
+ /locus_tag="SARI_02168"
+ /inference="protein motif:HMMPfam:IPR006204"
+ /inference="protein motif:HMMPfam:IPR013750"
+ /inference="protein motif:HMMPIR:IPR000705"
+ /inference="protein motif:HMMTigr:IPR000705"
+ /inference="protein motif:ScanRegExp:IPR000705"
+ /inference="protein motif:ScanRegExp:IPR006203"
+ /inference="similar to AA sequence:REFSEQ:NP_455316.1"
+ /note="catalyzes the formation of alpha-D-galactose
+ 1-phosphate from D-galactose in galactose metabolism"
+ /codon_start=1
+ /transl_table=11
+ /product="galactokinase"
+ /protein_id="YP_001571187.1"
+ /db_xref="GI:161504075"
+ /db_xref="InterPro:IPR000705"
+ /db_xref="InterPro:IPR006203"
+ /db_xref="InterPro:IPR006204"
+ /db_xref="InterPro:IPR013750"
+ /translation="MNLKEKTRALFAEVFGYPATHTIQAPGRVNLIGEHTDYNDGFVL
+ PCAIDYQTVISCAPRDDRTVRVIAADYDNQVDEFSLDAPIVTHDSQQWSNYVRGVVKH
+ LQQRNNAFGGVDMVISGNVPQGAGLSSSASLEVAVGTVFQQLYHLPLDGAQIALNGQE
+ AENQFVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINSNFKRTL
+ VGSEYNTRREQCETGARFFQQPALRDVSLEAFNAVACELDPVVAKRVRHVLSENARTV
+ EAASALEKGDLQRMGQLMAESHASMRDDFEITVPQIDTLVEIVKATIGDKGGVRMTGG
+ GFGGCIVALIPEDLVPAVQQAVAQQYEAKTGIKETFYVCKPSQGAGQC"
+ misc_feature 2103408..2104553
+ /locus_tag="SARI_02168"
+ /note="galactokinase; Provisional; Region: PRK05101"
+ /db_xref="CDD:179937"
+ misc_feature 2103429..2103584
+ /locus_tag="SARI_02168"
+ /note="Galactokinase galactose-binding signature; Region:
+ GalKase_gal_bdg; pfam10509"
+ /db_xref="CDD:204502"
+ misc_feature 2103747..2103953
+ /locus_tag="SARI_02168"
+ /note="GHMP kinases N terminal domain; Region:
+ GHMP_kinases_N; pfam00288"
+ /db_xref="CDD:215839"
+ gene 2104550..2105590
+ /gene="galM"
+ /locus_tag="SARI_02169"
+ CDS 2104550..2105590
+ /gene="galM"
+ /locus_tag="SARI_02169"
+ /inference="protein motif:HMMPfam:IPR008183"
+ /inference="protein motif:HMMTigr:IPR013458"
+ /inference="protein motif:ScanRegExp:IPR008183"
+ /inference="protein motif:superfamily:IPR011013"
+ /inference="similar to AA sequence:INSD:AAL19711.1"
+ /note="'catalyzes the conversion of alpha-aldose to the
+ beta-anomer; active on D-glucose, L-arabinose, D-xylose,
+ D-galactose, maltose and lactose; links the metabolism of
+ lactose and galactose'"
+ /codon_start=1
+ /transl_table=11
+ /product="aldose 1-epimerase"
+ /protein_id="YP_001571188.1"
+ /db_xref="GI:161504076"
+ /db_xref="InterPro:IPR008183"
+ /db_xref="InterPro:IPR011013"
+ /db_xref="InterPro:IPR013458"
+ /translation="MLNETPALAPDGQPYRLLTLRNRAGMVVTLMDWGATLLSARIPL
+ SDGSVREALLGCASPERYPEQTSFLGASIGRYANRIANSRYTFAGETVQLSPSQGENQ
+ LHGGPEGFDKRRWQIVNQNDRQVLFALTSDDGDQGFPGHLCATAQYRLTDDNRISITY
+ RATVDKPCPVNLTNHVYFNLDGDQTDVRQHKLQILADEYLPVDEYGIPRQGLKSVANT
+ SFDFRMPKVIASEFLADDDQRKVKGYDHAFLLQTQGDGKKPAARLWSQDGKLQMMVYT
+ TAPALQFYSGNYLAGTPARGPEPYADWQGVALESELLPDSPNHPEWPQPDCILRPGEE
+ YASLTEYQFIPF"
+ misc_feature 2104598..2105578
+ /gene="galM"
+ /locus_tag="SARI_02169"
+ /note="galactose mutarotase_like; Region:
+ galactose_mutarotase_like; cd09019"
+ /db_xref="CDD:185696"
+ misc_feature order(2104751..2104753,2104784..2104786,2104859..2104861,
+ 2105072..2105074,2105078..2105080,2105282..2105284,
+ 2105399..2105401,2105474..2105476)
+ /gene="galM"
+ /locus_tag="SARI_02169"
+ /note="active site"
+ /db_xref="CDD:185696"
+ misc_feature order(2105072..2105074,2105474..2105476)
+ /gene="galM"
+ /locus_tag="SARI_02169"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:185696"
+ gene complement(2105628..2106374)
+ /locus_tag="SARI_02170"
+ CDS complement(2105628..2106374)
+ /locus_tag="SARI_02170"
+ /inference="protein motif:HMMPfam:IPR006879"
+ /inference="similar to AA sequence:INSD:AAN80591.1"
+ /note="'KEGG: eci:UTI89_C1926 6.9e-69 ydjC; hypothetical
+ protein YdjC K03478;
+ COG: COG3394 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571189.1"
+ /db_xref="GI:161504077"
+ /db_xref="InterPro:IPR006879"
+ /translation="MTKLLIVNADDFGLSPGINYGIIEAHRHGMVTSTTAMMNGNGIE
+ HAAEISADFPSLGVGLHFVLSFGAPLSRMPSLEREGMLGKWLWQAAAQGKIQDNELVA
+ ELHKQYDCFVRLFGRAPTHIDSHHHAHFIPQVWKHVVRFAGETGLPLRIDRQHTISTQ
+ GVKGVDNFISDFYAENVSAHFILAALARATAGEEQSVELMCHPGFIDKIVLQSRYCYP
+ RLDELNVLTSATLKHDILAQGFRLGTYNDL"
+ misc_feature complement(2105679..2106365)
+ /locus_tag="SARI_02170"
+ /note="Enterococcus faecalis EF3048 and similar proteins;
+ Region: YdjC_EF3048_like; cd10803"
+ /db_xref="CDD:212114"
+ misc_feature complement(order(2105718..2105720,2105769..2105771,
+ 2106000..2106002,2106006..2106008,2106012..2106014,
+ 2106192..2106194,2106198..2106200,2106336..2106338,
+ 2106342..2106347))
+ /locus_tag="SARI_02170"
+ /note="putative active site [active]"
+ /db_xref="CDD:212114"
+ misc_feature complement(order(2105718..2105720,2105769..2105771,
+ 2106000..2106017,2106192..2106200,2106336..2106347))
+ /locus_tag="SARI_02170"
+ /note="YdjC motif; other site"
+ /db_xref="CDD:212114"
+ misc_feature complement(order(2106000..2106002,2106192..2106194,
+ 2106342..2106347))
+ /locus_tag="SARI_02170"
+ /note="Mg binding site [ion binding]; other site"
+ /db_xref="CDD:212114"
+ misc_feature complement(order(2106036..2106038,2106045..2106047,
+ 2106069..2106071,2106132..2106134,2106138..2106143,
+ 2106240..2106254,2106261..2106263,2106327..2106329))
+ /locus_tag="SARI_02170"
+ /note="putative homodimer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:212114"
+ gene complement(2106387..2107742)
+ /locus_tag="SARI_02171"
+ CDS complement(2106387..2107742)
+ /locus_tag="SARI_02171"
+ /inference="protein motif:BlastProDom:IPR001088"
+ /inference="protein motif:HMMPfam:IPR001088"
+ /inference="protein motif:ScanRegExp:IPR001088"
+ /inference="similar to AA sequence:REFSEQ:ZP_00727832.1"
+ /note="'KEGG: ssn:SSO_1424 1.7e-191 celF; cryptic
+ phospho-beta-glucosidase K01222;
+ COG: COG1486
+ Alpha-galactosidases/6-phospho-beta-glucosidases, family 4
+ of glycosyl hydrolases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571190.1"
+ /db_xref="GI:161504078"
+ /db_xref="InterPro:IPR001088"
+ /translation="MKKLKVVTIGGGSSYTPELLDGFIKRYDELPVSELWLVDIEEGR
+ EKLDIIFALCQRMVIQAGVPIAIYKSLNRQEALKDADFVTTQFRVGQLKAREQDERIP
+ LSHGYLGQETNGAGGLFKGLRTIPVIFDIVKDVQQICPQAWIINFTNPAGMVTEAVYR
+ HTRFKRFIGVCNVPVGMRMLIEDILSLTKEDTLSIDLFGLNHLVFISNIWVNGQSRFA
+ EVMNLVASGTTSGSSVKNIFSLPFSEGLLRSLNLLPCSYLLYYFKSKEMLAIEMGEYY
+ KGTVRAQIVQELEKKLFEIYKKPEQNSKPAELEARGGAYYSDAACEVINAIYNDKQTE
+ HYINIPHVGHINNIPVDWSVEMTCLLGKNGATPHPRITHFDEKVLGLIYTIKSFEIAA
+ ANAALSGRMDDVLLALNLNPLVGSDQGAEILAREMMLANQPHLPHFADAISVLRQQEH
+ Y"
+ misc_feature complement(2106420..2107742)
+ /locus_tag="SARI_02171"
+ /note="Alpha-galactosidases/6-phospho-beta-glucosidases,
+ family 4 of glycosyl hydrolases [Carbohydrate transport
+ and metabolism]; Region: CelF; COG1486"
+ /db_xref="CDD:224403"
+ misc_feature complement(2106438..2107733)
+ /locus_tag="SARI_02171"
+ /note="Glycoside Hydrolases Family 4;
+ Phospho-beta-glucosidase; Region: GH4_P_beta_glucosidase;
+ cd05296"
+ /db_xref="CDD:133432"
+ misc_feature complement(order(2106795..2106797,2106810..2106812,
+ 2106876..2106878,2107296..2107298,2107302..2107304,
+ 2107350..2107352,2107410..2107412,2107479..2107487,
+ 2107605..2107607,2107623..2107628,2107698..2107700,
+ 2107704..2107709))
+ /locus_tag="SARI_02171"
+ /note="NAD binding site [chemical binding]; other site"
+ /db_xref="CDD:133432"
+ misc_feature complement(order(2106795..2106797,2106807..2106812,
+ 2106900..2106902,2106972..2106974,2107137..2107139,
+ 2107227..2107229,2107296..2107298,2107410..2107412,
+ 2107458..2107460))
+ /locus_tag="SARI_02171"
+ /note="sugar binding site [chemical binding]; other site"
+ /db_xref="CDD:133432"
+ misc_feature complement(order(2107137..2107139,2107230..2107232))
+ /locus_tag="SARI_02171"
+ /note="divalent metal binding site [ion binding]; other
+ site"
+ /db_xref="CDD:133432"
+ misc_feature complement(order(2106636..2106647,2106651..2106653,
+ 2106657..2106662,2106717..2106719,2106753..2106755,
+ 2107104..2107106,2107113..2107115,2107161..2107163,
+ 2107173..2107175))
+ /locus_tag="SARI_02171"
+ /note="tetramer (dimer of dimers) interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:133432"
+ misc_feature complement(order(2106480..2106482,2106486..2106488,
+ 2106492..2106497,2106525..2106530,2106537..2106539,
+ 2106561..2106563,2106582..2106584,2106594..2106596,
+ 2106615..2106620,2106948..2106953,2106957..2106959,
+ 2106993..2107001,2107008..2107010,2107014..2107016))
+ /locus_tag="SARI_02171"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:133432"
+ gene complement(2107739..2108566)
+ /locus_tag="SARI_02172"
+ CDS complement(2107739..2108566)
+ /locus_tag="SARI_02172"
+ /inference="protein motif:FPrintScan:IPR000005"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR000005"
+ /inference="protein motif:HMMPfam:IPR013096"
+ /inference="protein motif:HMMSmart:IPR000005"
+ /inference="protein motif:superfamily:IPR003313"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:INSD:ABP01551.1"
+ /note="represses the celABCDF-ydjC operon involved in
+ carbon uptake"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional regulator ChbR"
+ /protein_id="YP_001571191.1"
+ /db_xref="GI:161504079"
+ /db_xref="InterPro:IPR000005"
+ /db_xref="InterPro:IPR003313"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /db_xref="InterPro:IPR013096"
+ /translation="MEINTVHENQFLKGKDFYFFILDKTESVSGLHQHDYYEFTLVLT
+ GSCSQEINGKRVILERGDFVFIPVGSYHQTFYDYGVTRILNMGVGRRYFDEHYMAILP
+ SCFVASQPYTMSNAFLTFIEQALSTLDIHQRECDEFNKLLTFYIVNRLQHYEDNSRSD
+ VIPGWLRQLVSDMHKKAMFADDALNNMVRLSGKTQSYLTRATNRYYHKTPGQIINAIR
+ INYCKKQLETTNFSVADIAFDAGFSSPGIFINNFKKMTSFTPGNYRRKLANSQQEHI"
+ misc_feature complement(2107754..2108566)
+ /locus_tag="SARI_02172"
+ /note="DNA-binding transcriptional regulator ChbR;
+ Provisional; Region: PRK10296"
+ /db_xref="CDD:182362"
+ misc_feature complement(<2108348..2108485)
+ /locus_tag="SARI_02172"
+ /note="Cupin domain; Region: Cupin_2; pfam07883"
+ /db_xref="CDD:219618"
+ misc_feature complement(2107772..2107897)
+ /locus_tag="SARI_02172"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ gene complement(2108579..2110042)
+ /locus_tag="SARI_02173"
+ CDS complement(2108579..2110042)
+ /locus_tag="SARI_02173"
+ /inference="protein motif:HMMPfam:IPR003352"
+ /inference="protein motif:HMMTigr:IPR004501"
+ /inference="protein motif:HMMTigr:IPR004796"
+ /inference="protein motif:ScanRegExp:IPR000568"
+ /inference="protein motif:superfamily:IPR008979"
+ /inference="similar to AA sequence:INSD:AAC74807.1"
+ /note="'catalyzes the phosphorylation of incoming sugar
+ substrates concomitant with their translocation across the
+ cell membrane; involved in N,N'-diacetylchitobiose
+ transport; protein IIA transfers a phosphoryl group to IIB
+ which then transfers the phosphoryl group to the sugar;
+ IIC forms the translocation channel for the sugar uptake'"
+ /codon_start=1
+ /transl_table=11
+ /product="PTS system N,N'-diacetylchitobiose-specific
+ transporter subunit IIC"
+ /protein_id="YP_001571192.1"
+ /db_xref="GI:161504080"
+ /db_xref="InterPro:IPR000568"
+ /db_xref="InterPro:IPR003352"
+ /db_xref="InterPro:IPR004501"
+ /db_xref="InterPro:IPR004796"
+ /db_xref="InterPro:IPR008979"
+ /translation="MYPVCHSERNILFVILSVKEIYIFPYQVFYLRVFIMSGAIRSLE
+ RVILPVAVTLGKQIHVNAIKNGFIRLMPLTLVGAIFVLINNVLLSFGEGSFFWSMGIR
+ LDVNTLASLEQLKVIGGSVYNGTLGIMSLMTPFFIGMALAEERKVDALAAGLLSLASF
+ MTVTPFTIGDVSAIGANWLGGANIISGIIIGLVVAEIFTFIIRQNWVIRLPDSVPESV
+ SRSFTALIPGFIILFMMGLIAWGLSLAGTHFHQVIMNSIATPLASLGSIVGWAYVIFN
+ ALLWFFGVHGGLALTALNSGILGPWGMENMATYTEYGSIDAALAAGKAFHFWTGPMLE
+ SYVYLGGTGATLSLIFAIFIASRRADYRQVAKIALPSGLFNINEPILFGLPIIMNPVL
+ MVPFVLIQPILAGITLLVYSLGIIPPSTNFAPWTMPVGLGAFFNSNGSIAALIIALVN
+ LAIATLIYLPFVIIANKAQNIIDEDESEEDIANALKF"
+ misc_feature complement(2108582..2109937)
+ /locus_tag="SARI_02173"
+ /note="PTS system N,N'-diacetylchitobiose-specific
+ transporter subunit IIC; Provisional; Region: PRK10297"
+ /db_xref="CDD:182363"
+ misc_feature complement(2108846..2109853)
+ /locus_tag="SARI_02173"
+ /note="Phosphotransferase system, EIIC; Region: PTS_EIIC;
+ pfam02378"
+ /db_xref="CDD:217005"
+ gene 2110382..2111155
+ /gene="gpmA"
+ /locus_tag="SARI_02174"
+ CDS 2110382..2111155
+ /gene="gpmA"
+ /locus_tag="SARI_02174"
+ /inference="protein motif:HMMPfam:IPR013078"
+ /inference="protein motif:HMMTigr:IPR005952"
+ /inference="protein motif:ScanRegExp:IPR001345"
+ /inference="similar to AA sequence:SwissProt:Q57RI5"
+ /note="'2,3-bisphosphoglycerate-dependent; catalyzes the
+ interconversion of 2-phosphoglycerate to
+ 3-phosphoglycerate'"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphoglyceromutase"
+ /protein_id="YP_001571193.1"
+ /db_xref="GI:161504081"
+ /db_xref="InterPro:IPR001345"
+ /db_xref="InterPro:IPR005952"
+ /db_xref="InterPro:IPR013078"
+ /translation="MSYRSESMAVTKLVLVRHGESQWNKENRFTGWYDVDLSEKGVSE
+ AKAAGKLLKEEGFSFDFAYTSVLKRAIHTLWNVLDELDQVWLPVEKSWKLNERHYGAL
+ QGLNKAETAEKYGDEQVKQWRRGFAVTPPELTKDDERYPGHDPRYAKLTDKELPTTES
+ LALTIERVIPYWNESILPRMKSGERVIIAAHGNSLRALVKYLDNMGEDEILELNIPTG
+ VPLVYEFDENFKPIKHYYLGNADEIAAKAAAVANQGKAK"
+ misc_feature 2110415..>2110669
+ /gene="gpmA"
+ /locus_tag="SARI_02174"
+ /note="Histidine phosphatase domain found in
+ phosphoglycerate mutases and related proteins, mostly
+ phosphatases; contains a His residue which is
+ phosphorylated during the reaction; Region: HP_PGM_like;
+ cd07067"
+ /db_xref="CDD:132718"
+ misc_feature order(2110430..2110435,2110586..2110588)
+ /gene="gpmA"
+ /locus_tag="SARI_02174"
+ /note="catalytic core [active]"
+ /db_xref="CDD:132718"
+ misc_feature <2110877..2111092
+ /gene="gpmA"
+ /locus_tag="SARI_02174"
+ /note="Histidine phosphatase domain found in
+ phosphoglycerate mutases and related proteins, mostly
+ phosphatases; contains a His residue which is
+ phosphorylated during the reaction; Region: HP_PGM_like;
+ cd07067"
+ /db_xref="CDD:132718"
+ gene 2111462..2111593
+ /locus_tag="SARI_02175"
+ CDS 2111462..2111593
+ /locus_tag="SARI_02175"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571194.1"
+ /db_xref="GI:161504082"
+ /translation="MNYSTESLRYIFIYISSSVMVDESHLPAIKKPALQAGLTRYED"
+ gene complement(2111590..2112642)
+ /locus_tag="SARI_02176"
+ CDS complement(2111590..2112642)
+ /locus_tag="SARI_02176"
+ /inference="protein motif:Gene3D:IPR006218"
+ /inference="protein motif:HMMPfam:IPR006218"
+ /inference="protein motif:HMMPIR:IPR006219"
+ /inference="protein motif:HMMTigr:IPR006219"
+ /inference="similar to AA sequence:REFSEQ:NP_459740.1"
+ /note="'catalyzes the formation of
+ 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from
+ phosphoenolpyruvate and D-erythrose 4-phosphate,
+ phenylalanine sensitive'"
+ /codon_start=1
+ /transl_table=11
+ /product="phospho-2-dehydro-3-deoxyheptonate aldolase"
+ /protein_id="YP_001571195.1"
+ /db_xref="GI:161504083"
+ /db_xref="InterPro:IPR006218"
+ /db_xref="InterPro:IPR006219"
+ /translation="MNYQNDDLRIKEINELLPPVALLEKFPATENAANTVAHARKAIH
+ KILKGNDDRLLVVIGPCSIHDPAAAKEYAARLLALRDELKGELEIVMRVYFEKPRTTV
+ GWKGLINDPHMDNSFQINDGLRIARKLLLDINDSGLPAAGEFLDMITPQYLADLMSWG
+ AIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHS
+ AIVNTSGNGDCHIILRGGKAPNYSAQHVAEVKEGLTKAGLTPQVMIDFSHANSCKQFQ
+ KQMEVCADVCQQIAGGEKAIIGVMVESHLVEGNQSLESGQPLTYGKSITDACIGWEDT
+ DALLRQLSEAVKARRG"
+ misc_feature complement(2111596..2112642)
+ /locus_tag="SARI_02176"
+ /note="phospho-2-dehydro-3-deoxyheptonate aldolase;
+ Validated; Region: PRK09261"
+ /db_xref="CDD:236435"
+ misc_feature complement(2111626..2112510)
+ /locus_tag="SARI_02176"
+ /note="DAHP synthetase I family; Region: DAHP_synth_1;
+ pfam00793"
+ /db_xref="CDD:216123"
+ unsure 2112577..2112737
+ /note="Sequence derived from one plasmid subclone"
+ gene 2112960..2113346
+ /locus_tag="SARI_02177"
+ CDS 2112960..2113346
+ /locus_tag="SARI_02177"
+ /inference="similar to AA sequence:INSD:AAL19698.1"
+ /note="'KEGG: pfa:PF08_0034 0.00065 gcn5; histone
+ acetyltransferase Gcn5, putative K00653;
+ COG: NOG09755 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571196.1"
+ /db_xref="GI:161504084"
+ /translation="MKMTKLTTLLLTATLGLASGAVLAAESNAQSSNGQANSAANAGQ
+ VAPDARQNVAPNDVNNNDINTNGNTNNTMQHPDGSTMNHDGMTKDEEHKNTMCKDGRC
+ PDINKKVETGNGVNNDVNTKTDGTTQ"
+ misc_feature <2113173..2113343
+ /locus_tag="SARI_02177"
+ /note="YbgS-like protein; Region: YbgS; pfam13985"
+ /db_xref="CDD:206155"
+ gene 2113457..2114398
+ /locus_tag="SARI_02178"
+ CDS 2113457..2114398
+ /locus_tag="SARI_02178"
+ /inference="protein motif:HMMPanther:IPR002524"
+ /inference="protein motif:HMMPfam:IPR002524"
+ /inference="protein motif:HMMTigr:IPR002524"
+ /inference="protein motif:ScanRegExp:IPR000187"
+ /inference="similar to AA sequence:SwissProt:Q8ZQT3"
+ /note="involved in zinc efflux across the cytoplasmic
+ membrane"
+ /codon_start=1
+ /transl_table=11
+ /product="zinc transporter ZitB"
+ /protein_id="YP_001571197.1"
+ /db_xref="GI:161504085"
+ /db_xref="InterPro:IPR000187"
+ /db_xref="InterPro:IPR002524"
+ /translation="MAHSHSHADSHLPKDNNARRLLFAFIVTAGFMLLEVAGGILSGS
+ LALLADAGHMLTDAAALLFALLAVKFSRRPPTVRHTFGWLRLTTLAAFVNAIALVVIT
+ ILIVWEAIERFYTPRPVTGSLMMMIAVAGLLANLFVFWILHRGSDEKNLNVRAAALHV
+ MGDLLGSVGAIAAALIIIWTGWTPADPILSILVSVLVLRSALRLLKDSVNELLEGAPV
+ SLDINALQRNLSREIPEVRNVHHVHVWMVGEKPVMTLHARVIPPHDHDALLERIQDFL
+ TDEYHIAHATIQMEYQVCHGPDCRLNQASSGYAHHHH"
+ misc_feature 2113457..2114392
+ /locus_tag="SARI_02178"
+ /note="zinc transporter ZitB; Provisional; Region:
+ PRK03557"
+ /db_xref="CDD:235130"
+ gene complement(2114395..2115114)
+ /locus_tag="SARI_02179"
+ CDS complement(2114395..2115114)
+ /locus_tag="SARI_02179"
+ /inference="protein motif:HMMPfam:IPR006419"
+ /inference="protein motif:HMMTigr:IPR006419"
+ /inference="similar to AA sequence:REFSEQ:YP_215743.1"
+ /note="'COG: COG3201 Nicotinamide mononucleotide
+ transporter;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571198.1"
+ /db_xref="GI:161504086"
+ /db_xref="InterPro:IPR006419"
+ /translation="MDFFSTQNILIYIPIGAGGYDLSWIEAVGTFAGLLCIWLASLEK
+ ISNYFFGLVNVTLFAIIFFQIQLYASLLLQLFFFAANIYGWYAWSRQTNDNEAELKIR
+ WLPLPKAITWLAICVIAIGLMTRYIDPVFAVLTRVAVGIMQMLGLQVTMPVLQPDAFP
+ LWDACMMVLSIAAMILMTRKYVENWLLWVIINVISVVIFALQGVYAMSLEYLILTFIA
+ VNGSRMWVNSARERGSRALSH"
+ misc_feature complement(2114398..2115114)
+ /locus_tag="SARI_02179"
+ /note="nicotinamide riboside transporter PnuC;
+ Provisional; Region: PRK15397"
+ /db_xref="CDD:185295"
+ gene complement(2115137..2116183)
+ /locus_tag="SARI_02180"
+ CDS complement(2115137..2116183)
+ /locus_tag="SARI_02180"
+ /inference="protein motif:HMMPfam:IPR003473"
+ /inference="protein motif:HMMTigr:IPR003473"
+ /inference="similar to AA sequence:REFSEQ:YP_215742.1"
+ /note="3 different subfamilies; catalyzes the formation of
+ quinolinate from iminoaspartate and dihydroxyacetone
+ phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="quinolinate synthetase"
+ /protein_id="YP_001571199.1"
+ /db_xref="GI:161504087"
+ /db_xref="InterPro:IPR003473"
+ /translation="MMSVMFDPDRAIYPFPPKPAPLSVEEKQFYREKIKHLLKERDAV
+ LVAHYYTDPEIQLLAEETGGCISDSLEMACFGAKHAASTLLVAGVRFMGETAKILSPE
+ KTILMPTLAAECSLDLGCQIDEFSAFCDAHPDRTVVVYANTSAAVKARADWVVTSSIA
+ VELIEHLDSLGEKIIWAPDRHLGNYVQTQTGADVLCWQGACIVHDEFKTQALTRLKKI
+ YSDAAILVHPEAPQSIVEMADAVGSTSQLIKAAKTLPHRQLIVATDRGIFYKMQQAVP
+ EKELLEAPTAGEGATCRSCAHCPWMAMNGLKAIAEGLEQGGAAHEIQVDAALREGALL
+ PLNRMLDFAATLRT"
+ misc_feature complement(2115152..2116153)
+ /locus_tag="SARI_02180"
+ /note="quinolinate synthetase; Provisional; Region:
+ PRK09375"
+ /db_xref="CDD:236489"
+ gene complement(2116405..2116477)
+ /locus_tag="SARI_02181"
+ tRNA complement(2116405..2116477)
+ /locus_tag="SARI_02181"
+ /product="tRNA-Lys"
+ gene complement(2116529..2116601)
+ /locus_tag="SARI_02182"
+ tRNA complement(2116529..2116601)
+ /locus_tag="SARI_02182"
+ /product="tRNA-Lys"
+ gene complement(2116653..2116725)
+ /locus_tag="SARI_02183"
+ tRNA complement(2116653..2116725)
+ /locus_tag="SARI_02183"
+ /product="tRNA-Lys"
+ gene complement(2116732..2116804)
+ /locus_tag="SARI_02184"
+ tRNA complement(2116732..2116804)
+ /locus_tag="SARI_02184"
+ /product="tRNA-Val"
+ gene complement(2116944..2117016)
+ /locus_tag="SARI_02185"
+ tRNA complement(2116944..2117016)
+ /locus_tag="SARI_02185"
+ /product="tRNA-Lys"
+ gene complement(2117181..2117969)
+ /locus_tag="SARI_02186"
+ CDS complement(2117181..2117969)
+ /locus_tag="SARI_02186"
+ /inference="protein motif:Gene3D:IPR011990"
+ /inference="protein motif:HMMPfam:IPR013105"
+ /inference="similar to AA sequence:INSD:CAD05212.1"
+ /note="periplasmic protein that interacts with TolA; the
+ tol-pal system is probably involved in maintaining cell
+ envelope integrity"
+ /codon_start=1
+ /transl_table=11
+ /product="tol-pal system protein YbgF"
+ /protein_id="YP_001571200.1"
+ /db_xref="GI:161504088"
+ /db_xref="InterPro:IPR011990"
+ /db_xref="InterPro:IPR013105"
+ /translation="MSSNFRHHLLSLSLLIGIAAPWAAFAQAPISSVGSGSVEDRVTQ
+ LERISNAHSQLLTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVIERQRQIMLQLGNLN
+ NGGAAQSATGDQSGAATAASPAPDAGTATSGAPVQSGDANTDYNAAIALVQDKSRQDD
+ AIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADA
+ MYKVGVIMQDKGDMAKAKAVYQQVINKYPGTDGAKQAQKRLNAM"
+ misc_feature complement(2117184..2117969)
+ /locus_tag="SARI_02186"
+ /note="tol-pal system protein YbgF; Provisional; Region:
+ PRK10803"
+ /db_xref="CDD:182745"
+ misc_feature complement(2117334..2117423)
+ /locus_tag="SARI_02186"
+ /note="Tetratricopeptide repeat; Region: TPR_6; pfam13174"
+ /db_xref="CDD:221956"
+ misc_feature complement(2117223..2117321)
+ /locus_tag="SARI_02186"
+ /note="Tetratricopeptide repeat; Region: TPR_6; pfam13174"
+ /db_xref="CDD:221956"
+ gene complement(2117979..2118503)
+ /locus_tag="SARI_02187"
+ CDS complement(2117979..2118503)
+ /locus_tag="SARI_02187"
+ /inference="protein motif:BlastProDom:IPR006665"
+ /inference="protein motif:HMMPfam:IPR006665"
+ /inference="protein motif:ScanRegExp:IPR006690"
+ /inference="similar to AA sequence:INSD:AAL19693.1"
+ /note="'KEGG: bxe:Bxe_A4171 1.5e-07 putative cytochrome c
+ oxidase K00403;
+ COG: COG2885 Outer membrane protein and related
+ peptidoglycan-associated (lipo)proteins;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="peptidoglycan-associated outer membrane
+ lipoprotein"
+ /protein_id="YP_001571201.1"
+ /db_xref="GI:161504089"
+ /db_xref="InterPro:IPR006665"
+ /db_xref="InterPro:IPR006690"
+ /translation="MQLNKVLKGLMIALPVMAVAACSSNKNASNDGSEGGMLNGAGTG
+ MDANGNGNMSSEEQARLQMQQLQQNNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSY
+ KVTVEGHADERGTPEYNISLGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHD
+ EAAYAKNRRAVLVY"
+ misc_feature complement(2117982..2118503)
+ /locus_tag="SARI_02187"
+ /note="peptidoglycan-associated outer membrane
+ lipoprotein; Provisional; Region: PRK10802"
+ /db_xref="CDD:182744"
+ misc_feature complement(2117985..2118290)
+ /locus_tag="SARI_02187"
+ /note="Peptidoglycan binding domains similar to the
+ C-terminal domain of outer-membrane protein OmpA; Region:
+ OmpA_C-like; cd07185"
+ /db_xref="CDD:143586"
+ misc_feature complement(order(2118000..2118002,2118012..2118014,
+ 2118138..2118140,2118147..2118152,2118162..2118164,
+ 2118171..2118176,2118273..2118278))
+ /locus_tag="SARI_02187"
+ /note="ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:143586"
+ gene complement(2118538..2119842)
+ /gene="tolB"
+ /locus_tag="SARI_02188"
+ CDS complement(2118538..2119842)
+ /gene="tolB"
+ /locus_tag="SARI_02188"
+ /inference="protein motif:HMMPfam:IPR007195"
+ /inference="protein motif:HMMPfam:IPR011659"
+ /inference="similar to AA sequence:SwissProt:Q5PCN2"
+ /note="forms dimers; may be involved in cell envelope
+ integrity; interacts with outer membrane proteins and with
+ the C-terminal domain of inner membrane protein TolA"
+ /codon_start=1
+ /transl_table=11
+ /product="translocation protein TolB"
+ /protein_id="YP_001571202.1"
+ /db_xref="GI:161504090"
+ /db_xref="InterPro:IPR007195"
+ /db_xref="InterPro:IPR011659"
+ /translation="MGDMMKQALRVAFGFLMLWAAVLHAEVRIEITQGVDSARPIGVV
+ PFKWAGPGAAPEDIGGIVAADLRNSGKFNPLDRSRLPQQPATAQEVQPAAWSALGIDA
+ VVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKL
+ TGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKL
+ AYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGTKLAFALSKTGSLNLYV
+ MDLASGQIRQITDGRSNNTEPTWFPDSQTLAFTSDQAGRPQVYKMNINGGAAQRITWE
+ GSQNQDADVSSDGKFMVMVSSNNGQQHIAKQDLVTGGVQVLSSTFLDETPSLAPNGTM
+ VIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKSPAWSPYL"
+ misc_feature complement(2118541..2119827)
+ /gene="tolB"
+ /locus_tag="SARI_02188"
+ /note="translocation protein TolB; Provisional; Region:
+ tolB; PRK03629"
+ /db_xref="CDD:235143"
+ misc_feature complement(2119468..2119764)
+ /gene="tolB"
+ /locus_tag="SARI_02188"
+ /note="TolB amino-terminal domain; Region: TolB_N;
+ pfam04052"
+ /db_xref="CDD:217863"
+ misc_feature complement(2119153..2119239)
+ /gene="tolB"
+ /locus_tag="SARI_02188"
+ /note="WD40-like Beta Propeller Repeat; Region: PD40;
+ pfam07676"
+ /db_xref="CDD:203719"
+ misc_feature complement(2119015..2119125)
+ /gene="tolB"
+ /locus_tag="SARI_02188"
+ /note="WD40-like Beta Propeller Repeat; Region: PD40;
+ pfam07676"
+ /db_xref="CDD:203719"
+ misc_feature complement(2118883..2118990)
+ /gene="tolB"
+ /locus_tag="SARI_02188"
+ /note="WD40-like Beta Propeller Repeat; Region: PD40;
+ pfam07676"
+ /db_xref="CDD:203719"
+ gene complement(2119953..2121113)
+ /gene="tolA"
+ /locus_tag="SARI_02189"
+ CDS complement(2119953..2121113)
+ /gene="tolA"
+ /locus_tag="SARI_02189"
+ /inference="protein motif:HMMPfam:IPR010528"
+ /inference="similar to AA sequence:REFSEQ:YP_215738.1"
+ /note="'inner membrane component of 7 member Tol-Pal
+ envelope-spanning complex; involved in maintaining cell
+ envelope integrity; utilized by colicins and filamentous
+ phages for import; interacts with TolB, Pal, and through
+ TolB to various outer membrane porins'"
+ /codon_start=1
+ /transl_table=11
+ /product="cell envelope integrity inner membrane protein
+ TolA"
+ /protein_id="YP_001571203.1"
+ /db_xref="GI:161504091"
+ /db_xref="InterPro:IPR010528"
+ /translation="MSKATEQNDKLKRAIIISAVLHIILFAVLIWSSFDEHIETSAGG
+ GGGSAIDAVMVDPGAVVQQYNRQQDQQASARRAEEERKKLQQQQEEELQEKQAAEQAR
+ LKQLEKERLAAQEQQKQAEEAAKLAQQQQKQAEEAAQKAAADAKKKAEAEATKAAADA
+ KKKAEAEAAKAVADAKKKAEAEAAKAAADAKKKAEAEAAKQAQAEAAKKAAAEKAAAD
+ KKAAAEKAAAEKKAAEKKAAADKAAADKAAAKKAAAAEGVDDLLGDLSSGKNAPKTGG
+ GAKGNGQPSKDSGTSGANGGATGADISAYAKQIQVAIQSRLYDASLYQGKQCVLHISL
+ APDGSLKSITSEGGDPALCQAALMAAKTAKIPKPPSQAVYEKIKDAKLDFKL"
+ misc_feature complement(2119956..>2120342)
+ /gene="tolA"
+ /locus_tag="SARI_02189"
+ /note="cell envelope integrity inner membrane protein
+ TolA; Provisional; Region: tolA; PRK09510"
+ /db_xref="CDD:236545"
+ misc_feature complement(2119962..2120213)
+ /gene="tolA"
+ /locus_tag="SARI_02189"
+ /note="TolA C-terminal; Region: TolA; pfam06519"
+ /db_xref="CDD:148245"
+ gene complement(2121178..2121606)
+ /locus_tag="SARI_02190"
+ CDS complement(2121178..2121606)
+ /locus_tag="SARI_02190"
+ /inference="protein motif:HMMPfam:IPR003400"
+ /inference="similar to AA sequence:REFSEQ:YP_151212.1"
+ /note="membrane spanning protein in TolA-TolQ-TolR
+ complex; involved in the tonB-independent uptake of group
+ A colicins"
+ /codon_start=1
+ /transl_table=11
+ /product="colicin uptake protein TolR"
+ /protein_id="YP_001571204.1"
+ /db_xref="GI:161504092"
+ /db_xref="InterPro:IPR003400"
+ /translation="MARSRGRGRRDLKSEINIVPLLDVLLVLLLIFMATAPIITQSVE
+ VDLPEANQSQAVSSNDDPPVIIEVSGVGQYSVVVDKERMDQLPSEQVIAEAKRHLQAN
+ PKTVFLIGGAKEVPYDEIIKALNLLHSAGVKSVGLMTQPI"
+ misc_feature complement(2121181..2121606)
+ /locus_tag="SARI_02190"
+ /note="Biopolymer transport protein [Intracellular
+ trafficking and secretion]; Region: ExbD; COG0848"
+ /db_xref="CDD:223917"
+ misc_feature complement(2121181..2121603)
+ /locus_tag="SARI_02190"
+ /note="colicin uptake protein TolR; Provisional; Region:
+ PRK11024"
+ /db_xref="CDD:236824"
+ gene complement(2121609..2122301)
+ /locus_tag="SARI_02191"
+ CDS complement(2121609..2122301)
+ /locus_tag="SARI_02191"
+ /inference="protein motif:HMMPfam:IPR002898"
+ /inference="similar to AA sequence:INSD:AAX64655.1"
+ /note="membrane spanning protein in TolA-TolQ-TolR
+ complex; involved in the tonB-independent uptake of group
+ A colicins"
+ /codon_start=1
+ /transl_table=11
+ /product="colicin uptake protein TolQ"
+ /protein_id="YP_001571205.1"
+ /db_xref="GI:161504093"
+ /db_xref="InterPro:IPR002898"
+ /translation="MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNA
+ AAREAEAFEDKFWSGIELSRLYQESQGRRDNLSGSEQIFYSGFKEFVRLHRANSHAPE
+ AVVEGASRAMRISMNRELETLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVK
+ QATLQMVAPGIAEALIATAIGLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILH
+ RQAFTVSESNKG"
+ misc_feature complement(2121612..2122292)
+ /locus_tag="SARI_02191"
+ /note="colicin uptake protein TolQ; Provisional; Region:
+ PRK10801"
+ /db_xref="CDD:182743"
+ gene complement(2122298..2122702)
+ /locus_tag="SARI_02192"
+ CDS complement(2122298..2122702)
+ /locus_tag="SARI_02192"
+ /inference="protein motif:HMMPfam:IPR006683"
+ /inference="protein motif:HMMTigr:IPR006684"
+ /inference="protein motif:ScanRegExp:IPR008272"
+ /inference="similar to AA sequence:REFSEQ:YP_215735.1"
+ /note="catalyzes the hydrolysis of short chain aliphatic
+ acyl-CoA thioesters; physiological role remains unknown;
+ involved in phospholipid metabolism; part of the Tol/Pal
+ system of proteins that are critical for maintaining the
+ integrity of the cell envelope components"
+ /codon_start=1
+ /transl_table=11
+ /product="acyl-CoA thioester hydrolase YbgC"
+ /protein_id="YP_001571206.1"
+ /db_xref="GI:161504094"
+ /db_xref="InterPro:IPR006683"
+ /db_xref="InterPro:IPR006684"
+ /db_xref="InterPro:IPR008272"
+ /translation="MNKSMFRWPIRVYYEDTDAGGVVYHASYVAFYERARTEMLRHHH
+ FSQQVLLAERVAFVVRRMTLEYYAPARLDDMLEVQTEITSMRGTALVFTQRIVNAENM
+ LLNEAEVLIVCVDPLKMKPRALPKSIVAEFKQ"
+ misc_feature complement(2122358..2122687)
+ /locus_tag="SARI_02192"
+ /note="4-hydroxybenzoyl-CoA thioesterase (4HBT). Catalyzes
+ the final step in the 4-chlorobenzoate degradation pathway
+ in which 4-chlorobenzoate is converted to
+ 4-hydroxybenzoate in certain soil-dwelling bacteria. 4HBT
+ forms a homotetramer with four active sites; Region: 4HBT;
+ cd00586"
+ /db_xref="CDD:238329"
+ misc_feature complement(order(2122436..2122447,2122526..2122528,
+ 2122532..2122534,2122604..2122606))
+ /locus_tag="SARI_02192"
+ /note="active site"
+ /db_xref="CDD:238329"
+ gene complement(2122976..2123269)
+ /locus_tag="SARI_02193"
+ CDS complement(2122976..2123269)
+ /locus_tag="SARI_02193"
+ /inference="protein motif:HMMTigr:IPR011846"
+ /inference="similar to AA sequence:REFSEQ:YP_215734.1"
+ /note="'COG: COG3790 Predicted membrane protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571207.1"
+ /db_xref="GI:161504095"
+ /db_xref="InterPro:IPR011846"
+ /translation="MTHIIAKLYAVMDKRPLRALSFVMAIVLAGCMFWDPSRFAAKTS
+ TLEIWHGLLLMWAVCAGIVHGVGFRPESVHWQGIFCPLLADIVLIAGLIFFFL"
+ misc_feature complement(2122979..2123269)
+ /locus_tag="SARI_02193"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10588"
+ /db_xref="CDD:236721"
+ gene complement(2123269..2123382)
+ /locus_tag="SARI_02194"
+ CDS complement(2123269..2123382)
+ /locus_tag="SARI_02194"
+ /inference="protein motif:HMMPfam:IPR012994"
+ /inference="protein motif:HMMTigr:IPR011724"
+ /inference="similar to AA sequence:INSD:AAL19686.1"
+ /note="'COG: COG4890 Predicted outer membrane lipoprotein;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571208.1"
+ /db_xref="GI:161504096"
+ /db_xref="InterPro:IPR011724"
+ /db_xref="InterPro:IPR012994"
+ /translation="MWYFAWILGTLLACAFGIITALALEHVEADKTGQKES"
+ misc_feature complement(2123272..2123382)
+ /locus_tag="SARI_02194"
+ /note="Membrane bound YbgT-like protein; Region:
+ YbgT_YccB; cl02039"
+ /db_xref="CDD:242848"
+ gene complement(2123397..2124536)
+ /locus_tag="SARI_02195"
+ CDS complement(2123397..2124536)
+ /locus_tag="SARI_02195"
+ /inference="protein motif:HMMPfam:IPR003317"
+ /inference="protein motif:HMMTigr:IPR003317"
+ /inference="similar to AA sequence:INSD:CAD05203.1"
+ /note="'KEGG: spt:SPA2002 3.2e-206 cydB; cytochrome d
+ ubiquinol oxidase subunit II K00426;
+ COG: COG1294 Cytochrome bd-type quinol oxidase, subunit 2;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571209.1"
+ /db_xref="GI:161504097"
+ /db_xref="InterPro:IPR003317"
+ /translation="MIDYEVLRFIWWLLVGILLIGFAVTDGFDMGVGMLTRFLGRNDT
+ ERRIMINSIAPHWDGNQVWLITAGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPV
+ GFDYRSKIEDPRWRNMWDWGVFIGSFVPPLVIGVAFGNLLQGVPFHVDEYLRLYYTGN
+ FFQLLNPFGLLAGIVSVGMIITQGATYLQMRTVGELHLRARATSQIAALVTLVCFALA
+ GVWVMYGIDGYVVTSAIDHHAASNPLTKEVAREAGAWLVNFNNAPILWLIPALGVVLP
+ LLTILTSRMEKGAWAFLFSSLTLACIILTAGIAMFPFVMPSSTMMNASLTMWDATSSQ
+ MTLNLMTWVAAVFVPIILIYTTWCYWKMFGRITKEHIESNTHSLY"
+ misc_feature complement(2123400..2124536)
+ /locus_tag="SARI_02195"
+ /note="cytochrome d ubiquinol oxidase subunit 2;
+ Provisional; Region: PRK15003"
+ /db_xref="CDD:184965"
+ misc_feature complement(2123415..2124536)
+ /locus_tag="SARI_02195"
+ /note="Cytochrome bd-type quinol oxidase, subunit 2
+ [Energy production and conversion]; Region: AppB; COG1294"
+ /db_xref="CDD:224213"
+ gene complement(2124552..2126123)
+ /locus_tag="SARI_02196"
+ CDS complement(2124552..2126123)
+ /locus_tag="SARI_02196"
+ /inference="protein motif:HMMPfam:IPR002585"
+ /inference="similar to AA sequence:REFSEQ:NP_459725.1"
+ /note="'KEGG: stm:STM0740 2.2e-278 cydA; cytochrome d
+ terminal oxidase, polypeptide subunit I K00425;
+ COG: COG1271 Cytochrome bd-type quinol oxidase, subunit 1;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571210.1"
+ /db_xref="GI:161504098"
+ /db_xref="InterPro:IPR002585"
+ /translation="MMLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLS
+ GKQIYKDMTKFWGKLFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGL
+ MAFFLESTFVGLFFFGWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIAADF
+ NFETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAYYMLKGRDFAFAK
+ RSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPASFTLFGIP
+ DQDKQENHLAIQIPYALGIIATRSVDTPVIGLKDLMVQHEERIRNGMKAYELLEQLRA
+ GSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVTDATEAQIQQATKDSIPRVAPLYFAFR
+ IMVACGFLLLVIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQ
+ PWAIGEVLPTAVANSSLTVGDLLFSMFLICGLYTLFLVAELFLMFKFARLGPSSLKTG
+ RYHFEQSTVTSQPAR"
+ misc_feature complement(2124555..2126120)
+ /locus_tag="SARI_02196"
+ /note="cytochrome d terminal oxidase subunit 1;
+ Provisional; Region: PRK15097"
+ /db_xref="CDD:185052"
+ misc_feature complement(2124603..2126120)
+ /locus_tag="SARI_02196"
+ /note="Bacterial Cytochrome Ubiquinol Oxidase; Region:
+ Bac_Ubq_Cox; cl00562"
+ /db_xref="CDD:241949"
+ unsure 2124573..2124699
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(2126525..2126794)
+ /locus_tag="SARI_02197"
+ CDS complement(2126525..2126794)
+ /locus_tag="SARI_02197"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571211.1"
+ /db_xref="GI:161504099"
+ /translation="MGGVITRVQRYSFHAVLIISKIKIGEMYKIISVDNLAKKSVSYL
+ AIIEHHDALFFTVRGTAKKRTKSLTLPNKPLFREGLALLFAKTKS"
+ gene 2127327..2127776
+ /locus_tag="SARI_02198"
+ CDS 2127327..2127776
+ /locus_tag="SARI_02198"
+ /inference="protein motif:Gene3D:IPR006158"
+ /inference="protein motif:HMMPfam:IPR006158"
+ /inference="protein motif:HMMTigr:IPR006394"
+ /inference="similar to AA sequence:INSD:AAG55064.1"
+ /note="converts methylaspartate to L-glutamate"
+ /codon_start=1
+ /transl_table=11
+ /product="methylaspartate mutase subunit S"
+ /protein_id="YP_001571212.1"
+ /db_xref="GI:161504100"
+ /db_xref="InterPro:IPR006158"
+ /db_xref="InterPro:IPR006394"
+ /translation="MKKPTLVIGVIGADCHAVGNKVLDRVFTAHNFRVINLGVMVSQD
+ EYIDAAIETGADAIVVSSIYGHGDIDCLGLRERCIERGIGDILLYVGGNLVVGKHDFA
+ GVEAKFKEMGFHRVFAPSHDLEDVCQLMANDINQRHGVEQHCLEEAM"
+ misc_feature 2127339..2127719
+ /locus_tag="SARI_02198"
+ /note="B12 binding domain of glutamate mutase (Glm).
+ Glutamate mutase catalysis the conversion of (S)-glutamate
+ with (2S,3S)-3-methylaspartate. The rearrangement reaction
+ is initiated by the extraction of a hydrogen from the
+ protein-bound substrate by a 5'...; Region:
+ Glm_B12_BD; cd02072"
+ /db_xref="CDD:239023"
+ misc_feature order(2127363..2127383,2127390..2127392,2127501..2127509,
+ 2127513..2127521,2127603..2127605,2127675..2127677,
+ 2127684..2127686,2127699..2127701)
+ /locus_tag="SARI_02198"
+ /note="B12 binding site [chemical binding]; other site"
+ /db_xref="CDD:239023"
+ misc_feature order(2127363..2127365,2127369..2127371,2127375..2127380,
+ 2127387..2127392,2127399..2127401,2127435..2127446,
+ 2127516..2127518,2127522..2127524,2127528..2127536,
+ 2127603..2127605,2127612..2127620,2127645..2127647,
+ 2127681..2127683)
+ /locus_tag="SARI_02198"
+ /note="heterodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:239023"
+ misc_feature 2127372..2127374
+ /locus_tag="SARI_02198"
+ /note="cobalt ligand [ion binding]; other site"
+ /db_xref="CDD:239023"
+ gene 2127776..2129164
+ /locus_tag="SARI_02199"
+ CDS 2127776..2129164
+ /locus_tag="SARI_02199"
+ /inference="protein motif:HMMPIR:IPR006230"
+ /inference="protein motif:HMMTigr:IPR006230"
+ /inference="similar to AA sequence:REFSEQ:NP_308790.1"
+ /note="'KEGG: fnu:FN1854 1.7e-58 methylaspartate mutase
+ K01846;
+ COG: NOG07779 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571213.1"
+ /db_xref="GI:161504101"
+ /db_xref="InterPro:IPR006230"
+ /translation="MQIVSVDIGSTWTKAALFSLEGDALTLVNHALTPTTTHHLADGF
+ FASLNQVLHVADARPLLQHGDIQLKYSSSAKGGLAVAAMGLVPSITLESAKITAHSAG
+ AKIAQYYAYKLNRHDIAELEASPPDILLFTGGTDGGEESYGLANARALAESTLDCAII
+ YAGNRDIQDEVQRILGHKDLIIVDNILPDLDHPNPYAARQAICDVFLSRIVKGKGLDV
+ IVSETGEEPMPTPWTVYELVKAISNIDNAWKEFMLIDMGGATTDVYSACANTLSPDTV
+ LHGVPEPFVKRTVEGDLGMRVSAMVVGESTEELVKVVFAQHPERQQAFYRYLHHLTAQ
+ PDYLPSNEEERYFDTVLAGLCVGYATERHAGTKKQVCTCVGNVDLQMGRDLTTVRKVV
+ GSGGWLSRASQFDIYNWLKYRELNDDGKSILLPNQFDYYRDSKGLLPLLANVARLYPQ
+ LAARTSIQCLTC"
+ misc_feature 2127791..2129158
+ /locus_tag="SARI_02199"
+ /note="conserved hypothetical protein; Region: glmL_fam;
+ TIGR01319"
+ /db_xref="CDD:130386"
+ gene 2129183..2130628
+ /locus_tag="SARI_02200"
+ CDS 2129183..2130628
+ /locus_tag="SARI_02200"
+ /inference="protein motif:HMMPfam:IPR006396"
+ /inference="protein motif:HMMPIR:IPR006396"
+ /inference="protein motif:HMMTigr:IPR006396"
+ /inference="similar to AA sequence:INSD:BAA28708.1"
+ /note="'KEGG: tde:TDE2236 2.0e-149 glmE; methylaspartate
+ mutase, E subunit K01846;
+ COG: COG4865 Glutamate mutase epsilon subunit;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571214.1"
+ /db_xref="GI:161504102"
+ /db_xref="InterPro:IPR006396"
+ /translation="MELRNKKLTHDEFMTERHQVLQTWHTGKEVEKFEEGVKYQHTIP
+ EQKRFSQALLKADREGRTLSQPRAGVALMDEHIALLKTLQEECDLLPSTIDAYTRLNR
+ YEEAAVGIQKSIEAGTSRLNGLPVVNHGVAACRRMTEALEKPIQVRHGTPDARLLAEI
+ AMASGFTSYEGGGISYNIPYAKRVTLEKSIRDWQYCDRLMGMYEEHGIRINREPFGPL
+ TGTLIPPFMSHAVAIIEGLLALEQGVKSITVGYGQVGCLTQDIAAIQSLRELSHEYFQ
+ NYGFDDYELSTVFHQWMGGFPEDESKAFAVISWGAAVAGMSGATKVITKSPHEAFGIP
+ TAAANAQGLKASRQMLNMVSDQKFPSCPAVDQEVELIKSEVRAVLKKVFELGNGDVAR
+ GTVLAFEAGVLDVPFAPAACNAGKILPVRDNTGAIRVLEAGAVPLPQDILALHHDYVA
+ ERAHVEGRKPSFQMVVDDINAVSHSKLIGRP"
+ misc_feature 2129321..2130598
+ /locus_tag="SARI_02200"
+ /note="Coenzyme B12-dependent glutamate mutase epsilon
+ subunit-like family; contains proteins similar to
+ Clostridium cochlearium glutamate mutase (Glm) and
+ Streptomyces tendae Tu901 NikV. Glm catalyzes a
+ carbon-skeleton rearrangement of L-glutamate to...;
+ Region: Glm_e; cd00245"
+ /db_xref="CDD:238149"
+ misc_feature order(2129381..2129383,2129459..2129461,2129477..2129479,
+ 2129624..2129629,2129690..2129692,2129708..2129710,
+ 2129720..2129722,2129825..2129827)
+ /locus_tag="SARI_02200"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:238149"
+ misc_feature order(2129459..2129461,2129717..2129719,2129837..2129839,
+ 2130059..2130070,2130164..2130169,2130176..2130181,
+ 2130590..2130592)
+ /locus_tag="SARI_02200"
+ /note="B12 cofactor binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:238149"
+ misc_feature order(2129468..2129473,2129480..2129482,2129543..2129548,
+ 2129717..2129722,2129726..2129728,2130170..2130175,
+ 2130578..2130580)
+ /locus_tag="SARI_02200"
+ /note="heterodimer (sigma-epsilon) interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:238149"
+ misc_feature order(2129945..2129947,2129951..2129953,2130077..2130079,
+ 2130083..2130088,2130104..2130109,2130116..2130118,
+ 2130203..2130205,2130212..2130217,2130224..2130226,
+ 2130233..2130235,2130452..2130454,2130596..2130598)
+ /locus_tag="SARI_02200"
+ /note="homodimer (epsilon-epsilon) interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:238149"
+ gene 2130628..2131869
+ /locus_tag="SARI_02201"
+ CDS 2130628..2131869
+ /locus_tag="SARI_02201"
+ /inference="protein motif:HMMPfam:IPR006395"
+ /inference="protein motif:HMMPIR:IPR006395"
+ /inference="protein motif:HMMTigr:IPR006395"
+ /inference="similar to AA sequence:INSD:BAA28709.1"
+ /note="'KEGG: ece:Z0892 3.0e-210 putative methylaspartate
+ ammonia-lyase K04835;
+ COG: COG3799 Methylaspartate ammonia-lyase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571215.1"
+ /db_xref="GI:161504103"
+ /db_xref="InterPro:IPR006395"
+ /translation="MKIKQALFTAGYSSFYFDDQQAIKNGAGHDGFIYTGAPVTPGFT
+ SVRQAGECVSVQLILENGAVAVGDCAAVQYSGAGGRDPLFLAEHFIPFLNNHIKPLLE
+ GRDVDTFLPNARFFDKLRIDGNLLHTAVRYGLSQALLDATALATGRLKTEVVYDEWQL
+ PCVPEAIPLFGQSGDDRYIAVDKMILKGVDVLPHALINNVEEKLGFQGEKLREYVRWL
+ SDRILRLRTSPRYHPTLHIDVYGTIGLIFDMDPLRCAEYIASLEKEAQGLPLYIEGPV
+ DAGNKPDQIRLLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAGSCHMVQIKTPD
+ LGGIHNIVDAVLYCNKHGMEAYQGGTCNETEISARTCVHVALAARPMRMLVKPGMGFD
+ EGLNIVFNEMNRTIALLQAKD"
+ misc_feature 2130628..2131866
+ /locus_tag="SARI_02201"
+ /note="Methylaspartate ammonia-lyase [Amino acid transport
+ and metabolism]; Region: Mal; COG3799"
+ /db_xref="CDD:226321"
+ misc_feature 2130742..2131854
+ /locus_tag="SARI_02201"
+ /note="Methylaspartate ammonia lyase (3-methylaspartase,
+ MAL) is a homodimeric enzyme, catalyzing the
+ magnesium-dependent reversible alpha,beta-elimination of
+ ammonia from L-threo-(2S,3S)-3-methylaspartic acid to
+ mesaconic acid. This reaction is part of the...; Region:
+ MAL; cd03314"
+ /db_xref="CDD:239430"
+ misc_feature order(2130745..2130750,2130787..2130789,2130808..2130810,
+ 2130823..2130825,2131162..2131164,2131171..2131176,
+ 2131183..2131188,2131288..2131290,2131789..2131797,
+ 2131801..2131806,2131813..2131815,2131825..2131827,
+ 2131834..2131839,2131846..2131848)
+ /locus_tag="SARI_02201"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:239430"
+ misc_feature order(2131141..2131143,2131207..2131209,2131339..2131341,
+ 2131444..2131446,2131546..2131548,2131612..2131614,
+ 2131705..2131710)
+ /locus_tag="SARI_02201"
+ /note="active site"
+ /db_xref="CDD:239430"
+ gene 2131873..2133243
+ /locus_tag="SARI_02202"
+ CDS 2131873..2133243
+ /locus_tag="SARI_02202"
+ /inference="similar to AA sequence:REFSEQ:NP_308787.1"
+ /note="'COG: NOG07992 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571216.1"
+ /db_xref="GI:161504104"
+ /translation="MGRKFKILSPTAILGYGFPEESFRKAMEESPDLIAVDAGSSDPG
+ PHYLGAGKPFTDRAGVKRDLRYMITAGVKRNIPVVIGTAGGSGAAPHLEWCRQIILEI
+ AQEENLAFSLALIPSDVDKAIVHQALDNGKITALEFVQELTHDTIEESTYIVAQMGIE
+ PFQRALKAGAQVVLGGRAYDPACFAALPIMQGFDEGLALHCGKILECAAIAATPGSGS
+ DCAMGIIDDNGFTLKTFNPQRKFTETSAAAHTLYEKSDPYFLPGPGGVLNLKECRFKA
+ VNDGEVYVSGSRHEATPYALKLEGARQVGFRCLTIAGTRDPIMIAGIDAILEEVKASV
+ ARNLSLKDDSIRMTFHLYGKNGVMGNHEPMQTAGHELGILLDVVAPTQDIANSVCSLV
+ RSTLLHYGYENRIATAGNLAFPFSPSDIQSGPVYEFSIYHLIEASDDLRFDFHLEQVT
+ PQGVQS"
+ misc_feature 2132056..2132931
+ /locus_tag="SARI_02202"
+ /note="Protein of unknown function (DUF1446); Region:
+ DUF1446; pfam07287"
+ /db_xref="CDD:219363"
+ gene 2133240..2133557
+ /locus_tag="SARI_02203"
+ CDS 2133240..2133557
+ /locus_tag="SARI_02203"
+ /inference="similar to AA sequence:REFSEQ:NP_308786.1"
+ /note="'COG: NOG19635 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571217.1"
+ /db_xref="GI:161504105"
+ /translation="MKQSICSLTQVIRSKNAGPYELVLDILFKTQEDYQRVKVSEQLT
+ PQLIASLYNVNPDFIHRIIWFDPANAVKIVMPRDIISGNVGDNDVYGAQQHAPLLAIS
+ LDL"
+ misc_feature 2133252..2133548
+ /locus_tag="SARI_02203"
+ /note="Domain of unknown function (DUF4387); Region:
+ DUF4387; pfam14330"
+ /db_xref="CDD:206498"
+ gene 2133623..2135029
+ /locus_tag="SARI_02204"
+ CDS 2133623..2135029
+ /locus_tag="SARI_02204"
+ /inference="protein motif:FPrintScan:IPR001991"
+ /inference="protein motif:HMMPfam:IPR001991"
+ /inference="similar to AA sequence:REFSEQ:NP_308785.1"
+ /note="'KEGG: eci:UTI89_C4668 6.9e-69 gltP;
+ glutamate-aspartate symport protein K03309;
+ COG: COG1301 Na+/H+-dicarboxylate symporters;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571218.1"
+ /db_xref="GI:161504106"
+ /db_xref="InterPro:IPR001991"
+ /translation="MRLVTTGVRLVCLLAQASAALHITRQPLSDGVKMKKISLTKMII
+ LGLILGMIAGVIINNTTSTETAKIYAQEISIFTTIFLRLVKMIIAPLVISTLVVGIAK
+ MGDAKTLGRIFSKTFFLFICASLLSIALGLVVVNLFEPGVGINFVPHDAGAVATVQSE
+ PFTLKVFISHAVPTSIVDAMARNEILQIVVFSIFLGCSLAAIGEKAEPIVKVFDSLVY
+ VMLKLTGYVMLFAPLTVFAAISGLIAERGLGVMVSAGIFMGEFYLTLSMLWAILIGLS
+ ALIVGPCISRLTRMIFEPALLAFTTSSSEAAFPGTLNKLEKFGVSPKIASFVLPIGYS
+ FNLVGSMAYCSFATVFIAQACNVHLSMGEQITMLLILMLTSKGMAGVPRASMVVIAAT
+ LNQFNIPEAGLILLMGVDPFLDMGRSATNVMSNAMGAAIVSRWEGEHFGAGCRGVAPI
+ NTPEQKRSASENSEVAMS"
+ misc_feature 2133827..2134936
+ /locus_tag="SARI_02204"
+ /note="Na+/H+-dicarboxylate symporters [Energy production
+ and conversion]; Region: GltP; COG1301"
+ /db_xref="CDD:224220"
+ misc_feature 2133860..2134936
+ /locus_tag="SARI_02204"
+ /note="Sodium:dicarboxylate symporter family; Region: SDF;
+ cl00573"
+ /db_xref="CDD:241958"
+ gene 2135147..2136799
+ /locus_tag="SARI_02205"
+ CDS 2135147..2136799
+ /locus_tag="SARI_02205"
+ /inference="protein motif:HMMPfam:IPR004646"
+ /inference="protein motif:HMMPfam:IPR004647"
+ /inference="protein motif:HMMPIR:IPR011167"
+ /inference="protein motif:HMMTigr:IPR004647"
+ /inference="similar to AA sequence:REFSEQ:NP_308784.1"
+ /note="'KEGG: ece:Z0887 1.5e-256 putative fumarate
+ hydratase K01676;
+ COG: COG1951 Tartrate dehydratase alpha subunit/Fumarate
+ hydratase class I, N-terminal domain;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571219.1"
+ /db_xref="GI:161504107"
+ /db_xref="InterPro:IPR004646"
+ /db_xref="InterPro:IPR004647"
+ /db_xref="InterPro:IPR011167"
+ /translation="MSKPFVWQQLFVQSKDNTEYELLTNQHVTVSELDGEEVIKVAPE
+ ALTLLAQHAFYEASFFLRAAHLQQIANILHDPQASHNDQYVALQLLRNAEVSAKGVLP
+ NCQDTGTATIVASKGQHIWTGGDDAEALSKGVYLTFQENNLRYSQNAPLDMYTEVNTQ
+ TNLPAQIDISAAPGSEYRFLFVNKGGGSANKAALFQETKSILQPEKLTAFLVEKMKML
+ GTAACPPYHIAFVVGGLSADQALKTAKLASTKYYDNLPDHGNELGQAFRDTALEKALL
+ NTSREFGIGAQFGGKYFAHDIRVIRLPRHGGSCPIAMALSCSADRNIKAKINKHGIWL
+ EKLERHPGKFIPESCRVEHSAQSVQLDLNRPLYDIRRDLAALPVGTRLSLSGPIVVAR
+ DIVHARIKARMDNGEPMPDYMKNHIVYYAGPAKTPDNQACGSLGPTTGGRMDSYVDAF
+ QAAGGSLIMLSKGNRSQQVTEACRKYGGFSLGSIGGAAALLAQQYVKNLRCLEYPELG
+ MEAVWMMEVEGLPAFLLVDDKGNNFFSQFEQQHRCASCPTGQ"
+ misc_feature 2135147..2136796
+ /locus_tag="SARI_02205"
+ /note="putative fumarate hydratase; Provisional; Region:
+ PRK15392"
+ /db_xref="CDD:185290"
+ misc_feature 2135255..2136175
+ /locus_tag="SARI_02205"
+ /note="Tartrate dehydratase alpha subunit/Fumarate
+ hydratase class I, N-terminal domain [Energy production
+ and conversion]; Region: TtdA; COG1951"
+ /db_xref="CDD:224862"
+ misc_feature 2136137..2136766
+ /locus_tag="SARI_02205"
+ /note="Fumarase C-terminus; Region: Fumerase_C; pfam05683"
+ /db_xref="CDD:218690"
+ gene 2136809..2137411
+ /locus_tag="SARI_02206"
+ CDS 2136809..2137411
+ /locus_tag="SARI_02206"
+ /inference="protein motif:HMMPfam:IPR003724"
+ /inference="protein motif:HMMPIR:IPR003724"
+ /inference="protein motif:HMMTigr:IPR003724"
+ /inference="similar to AA sequence:INSD:BAB34179.1"
+ /note="'catalyzes the formation of adenosylcob(III)yrinic
+ acid a,c-diamide from cob(I)yrinic acid a,c-diamide'"
+ /codon_start=1
+ /transl_table=11
+ /product="cob(I)yrinic acid a,c-diamide
+ adenosyltransferase"
+ /protein_id="YP_001571220.1"
+ /db_xref="GI:161504108"
+ /db_xref="InterPro:IPR003724"
+ /translation="MEARDNTERHRQRQQKLKTQVDSRIAAATVKKGVLIVFTGNGKG
+ KSTAAFGTVTRAVGHRKTVGVAQFIKGQWDNGEYNVLHPLGVEFHIMGTGFTWETQDR
+ EADKEAAEAVWLESKRMLADPRYDLVVLDELTWMLAYHYLETQEVVEAIISRPLEQNV
+ IVTGRGCHARLLELADTVSEIRPVKHAFDSGIQAQAGIDW"
+ misc_feature 2136830..2137408
+ /locus_tag="SARI_02206"
+ /note="ATP:corrinoid adenosyltransferase [Coenzyme
+ metabolism]; Region: BtuR; COG2109"
+ /db_xref="CDD:225020"
+ misc_feature <2136830..2136883
+ /locus_tag="SARI_02206"
+ /note="Cob(I)alamin adenosyltransferase N terminal;
+ Region: Co_AT_N; pfam12557"
+ /db_xref="CDD:193078"
+ misc_feature 2136899..2137372
+ /locus_tag="SARI_02206"
+ /note="ATP:corrinoid adenosyltransferase BtuR/CobO/CobP.
+ This family consists of the BtuR, CobO, CobP proteins all
+ of which are Cob(I)alamin (vitamin B12)
+ adenosyltransferase, which is involved in cobalamin
+ (vitamin B12) biosynthesis. This enzyme is a homodimer;
+ Region: CobA_CobO_BtuR; cd00561"
+ /db_xref="CDD:238314"
+ misc_feature order(2136902..2136904,2136935..2136937,2136947..2136949,
+ 2136959..2136964,2136968..2136985,2137028..2137030,
+ 2137034..2137039,2137043..2137048,2137283..2137285,
+ 2137322..2137327,2137331..2137354,2137358..2137363,
+ 2137367..2137369)
+ /locus_tag="SARI_02206"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238314"
+ misc_feature 2136926..2136946
+ /locus_tag="SARI_02206"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:238314"
+ misc_feature order(2136935..2136937,2136941..2136949,2136971..2136973,
+ 2137202..2137204)
+ /locus_tag="SARI_02206"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238314"
+ misc_feature order(2137016..2137018,2137025..2137027,2137097..2137099,
+ 2137211..2137213,2137223..2137225,2137301..2137303,
+ 2137370..2137372)
+ /locus_tag="SARI_02206"
+ /note="hydroxycobalamin binding site [chemical binding];
+ other site"
+ /db_xref="CDD:238314"
+ misc_feature 2137187..2137201
+ /locus_tag="SARI_02206"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:238314"
+ gene complement(2137452..2138369)
+ /locus_tag="SARI_02207"
+ CDS complement(2137452..2138369)
+ /locus_tag="SARI_02207"
+ /inference="protein motif:FPrintScan:IPR000847"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="protein motif:HMMPfam:IPR005119"
+ /inference="similar to AA sequence:INSD:AAG55055.1"
+ /note="'KEGG: shn:Shewana3_3435 0.0021 transcriptional
+ regulator, LysR family K06022;
+ COG: COG0583 Transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571221.1"
+ /db_xref="GI:161504109"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR005119"
+ /db_xref="InterPro:IPR011991"
+ /translation="MEDVMRGKIPKTELLVTFEVVARHESYTRAAEELALTQSAVFRQ
+ VNALEEFLHTSLFNHAKKRIFLNAAGKYYLSIVKETLNKLERDTNSIMTWQPTVQVIE
+ LAVNPTFSTHWLIPNLREFNKLNPDIIINIHSLANIGDFLNREYDAAIMREDFCSPWS
+ EREYLFEEEILPVCSGSLLSQPQQKLAVDELLNEFTLLHQSTRINGWQEWFALSGISS
+ PQVNNGPRFDLLSMLIAAVRSNLGVALLPRFAIQHDLDNGDMVIPCDVPIRTGNRFIM
+ TWREDKTESCHLRSFREWLLQKSVVSREN"
+ misc_feature complement(2138157..2138333)
+ /locus_tag="SARI_02207"
+ /note="Bacterial regulatory helix-turn-helix protein, lysR
+ family; Region: HTH_1; pfam00126"
+ /db_xref="CDD:215735"
+ misc_feature complement(2137476..2138318)
+ /locus_tag="SARI_02207"
+ /note="DNA-binding transcriptional activator GcvA;
+ Provisional; Region: PRK11139"
+ /db_xref="CDD:182990"
+ misc_feature complement(2137485..2138072)
+ /locus_tag="SARI_02207"
+ /note="The substrate binding domain of LysR-type
+ transcriptional regulators (LTTRs), a member of the type 2
+ periplasmic binding fold protein superfamily; Region:
+ PBP2_LTTR_substrate; cl11398"
+ /db_xref="CDD:245600"
+ misc_feature complement(order(2137653..2137658,2137662..2137667,
+ 2137683..2137700,2137968..2137988,2137992..2137994,
+ 2138004..2138006,2138013..2138018,2138022..2138027))
+ /locus_tag="SARI_02207"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:176102"
+ gene complement(2138708..2139310)
+ /locus_tag="SARI_02208"
+ CDS complement(2138708..2139310)
+ /locus_tag="SARI_02208"
+ /inference="protein motif:FPrintScan:IPR000005"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR000005"
+ /inference="protein motif:HMMSmart:IPR000005"
+ /inference="protein motif:ScanRegExp:IPR003006"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:REFSEQ:ZP_00823347.1"
+ /note="'KEGG: bli:BL05281 2.5e-07 adaA;
+ methylphosphotriester-DNA alkyltransferase and
+ transcriptional regulator (AraC/XylS family) K00567;
+ COG: COG2207 AraC-type DNA-binding domain-containing
+ proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571222.1"
+ /db_xref="GI:161504110"
+ /db_xref="InterPro:IPR000005"
+ /db_xref="InterPro:IPR003006"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /translation="MENQQVCGFIVCGKVRVKYQEYKAIDLMNIEPWENDTALRKAWW
+ SLKVIDNNRLAAAVNLLSFMVNSFTSNTDTILVENLLTSSETDYSLSRHEKKRIAVLR
+ YIEANLYSKLTLDSVAAHVCLSANYFSRFFKKRQGINFKTWVNQRRMHRAGELLRNTD
+ QTIDHIARKLQYAQTSYFCRVFHATYHMSPQMYRRHRQLV"
+ misc_feature complement(2138717..2139085)
+ /locus_tag="SARI_02208"
+ /note="AraC-type DNA-binding domain-containing proteins
+ [Transcription]; Region: AraC; COG2207"
+ /db_xref="CDD:225117"
+ misc_feature complement(2138876..2139001)
+ /locus_tag="SARI_02208"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ gene complement(2139803..2140672)
+ /locus_tag="SARI_02209"
+ CDS complement(2139803..2140672)
+ /locus_tag="SARI_02209"
+ /inference="protein motif:FPrintScan:IPR005810"
+ /inference="protein motif:HMMPfam:IPR003781"
+ /inference="protein motif:HMMPfam:IPR005811"
+ /inference="protein motif:HMMPIR:IPR005810"
+ /inference="protein motif:HMMTigr:IPR005810"
+ /inference="protein motif:ScanRegExp:IPR005810"
+ /inference="similar to AA sequence:REFSEQ:NP_459724.1"
+ /note="Catalyzes the only substrate-level phosphorylation
+ in the TCA cycle"
+ /codon_start=1
+ /transl_table=11
+ /product="succinyl-CoA synthetase subunit alpha"
+ /protein_id="YP_001571223.1"
+ /db_xref="GI:161504111"
+ /db_xref="InterPro:IPR003781"
+ /db_xref="InterPro:IPR005810"
+ /db_xref="InterPro:IPR005811"
+ /translation="MSVLINKDTKVICQGFTGSQGTFHSEQAIAYGTQMVGGVTPGKG
+ GTTHLGLPVFNTVREAVDATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPT
+ LDMLTVKVKLDEAGVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYE
+ AVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEA
+ AAYIKDHVTKPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRS
+ LADIGEALKAIIK"
+ misc_feature complement(2139806..2140672)
+ /locus_tag="SARI_02209"
+ /note="succinyl-CoA synthetase subunit alpha; Validated;
+ Region: PRK05678"
+ /db_xref="CDD:180194"
+ misc_feature complement(2140373..2140663)
+ /locus_tag="SARI_02209"
+ /note="CoA binding domain; Region: CoA_binding;
+ smart00881"
+ /db_xref="CDD:214881"
+ misc_feature complement(2139860..2140222)
+ /locus_tag="SARI_02209"
+ /note="CoA-ligase; Region: Ligase_CoA; pfam00549"
+ /db_xref="CDD:215988"
+ gene complement(2140672..2141838)
+ /gene="sucC"
+ /locus_tag="SARI_02210"
+ CDS complement(2140672..2141838)
+ /gene="sucC"
+ /locus_tag="SARI_02210"
+ /inference="protein motif:Gene3D:IPR013816"
+ /inference="protein motif:HMMPanther:IPR005809"
+ /inference="protein motif:HMMPfam:IPR005811"
+ /inference="protein motif:HMMPfam:IPR013650"
+ /inference="protein motif:HMMPIR:IPR005809"
+ /inference="protein motif:HMMTigr:IPR005809"
+ /inference="protein motif:ScanRegExp:IPR005809"
+ /inference="similar to AA sequence:INSD:CAD05200.1"
+ /note="catalyzes the interconversion of succinyl-CoA and
+ succinate"
+ /codon_start=1
+ /transl_table=11
+ /product="succinyl-CoA synthetase subunit beta"
+ /protein_id="YP_001571224.1"
+ /db_xref="GI:161504112"
+ /db_xref="InterPro:IPR005809"
+ /db_xref="InterPro:IPR005811"
+ /db_xref="InterPro:IPR013650"
+ /db_xref="InterPro:IPR013816"
+ /translation="MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWV
+ VKCQVHAGGRGKAGGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAAT
+ DIGKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQG
+ RELAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGA
+ DGNALFRQPDLREMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIV
+ KLHGGEPANFLDVGGGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIG
+ AVEEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEGK"
+ misc_feature complement(2140675..2141838)
+ /gene="sucC"
+ /locus_tag="SARI_02210"
+ /note="succinyl-CoA synthetase subunit beta; Provisional;
+ Region: sucC; PRK00696"
+ /db_xref="CDD:234813"
+ misc_feature complement(2141230..2141835)
+ /gene="sucC"
+ /locus_tag="SARI_02210"
+ /note="ATP-grasp domain; Region: ATP-grasp_2; pfam08442"
+ /db_xref="CDD:219843"
+ misc_feature complement(2140693..2141055)
+ /gene="sucC"
+ /locus_tag="SARI_02210"
+ /note="CoA-ligase; Region: Ligase_CoA; pfam00549"
+ /db_xref="CDD:215988"
+ gene complement(2141985..2143205)
+ /locus_tag="SARI_02211"
+ CDS complement(2141985..2143205)
+ /locus_tag="SARI_02211"
+ /inference="protein motif:BlastProDom:IPR001078"
+ /inference="protein motif:HMMPfam:IPR000089"
+ /inference="protein motif:HMMPfam:IPR001078"
+ /inference="protein motif:HMMPfam:IPR004167"
+ /inference="protein motif:HMMTigr:IPR006255"
+ /inference="protein motif:ScanRegExp:IPR003016"
+ /inference="protein motif:superfamily:IPR011053"
+ /inference="similar to AA sequence:INSD:AAV77909.1"
+ /note="component of 2-oxoglutarate dehydrogenase complex;
+ catalyzes the transfer of succinyl coenzyme A to form
+ succinyl CoA as part of the conversion of 2-oxoglutarate
+ to succinyl-CoA"
+ /codon_start=1
+ /transl_table=11
+ /product="dihydrolipoamide succinyltransferase"
+ /protein_id="YP_001571225.1"
+ /db_xref="GI:161504113"
+ /db_xref="InterPro:IPR000089"
+ /db_xref="InterPro:IPR001078"
+ /db_xref="InterPro:IPR003016"
+ /db_xref="InterPro:IPR004167"
+ /db_xref="InterPro:IPR006255"
+ /db_xref="InterPro:IPR011053"
+ /translation="MSSVDILVPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDK
+ VVLEVPASADGILDAVLEEEGTTVTSRQILGRLREGNSAGKETSAKSEEKASTPAQRQ
+ QASLEEQNNDALSPAIRRLLAEHNLEASAIKGTGVGGRITREDVEKHLAKAPAKDESK
+ APETAPAAQPALGARGEKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLR
+ KQYGEVFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASIDGDDVVYHNYFDVSMAVST
+ PRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLM
+ STPIINPPQSAILGMHAIKDRPMAIDGKVEILPMMYLALSYDHRLIDGRESVGFLVTI
+ KELLEDPTRLLLDV"
+ misc_feature complement(2141988..2143202)
+ /locus_tag="SARI_02211"
+ /note="dihydrolipoamide succinyltransferase; Validated;
+ Region: PRK05704"
+ /db_xref="CDD:235571"
+ misc_feature complement(2142975..2143196)
+ /locus_tag="SARI_02211"
+ /note="Lipoyl domain of the dihydrolipoyl acyltransferase
+ component (E2) of 2-oxo acid dehydrogenases. 2-oxo acid
+ dehydrogenase multienzyme complexes, like pyruvate
+ dehydrogenase (PDH), 2-oxoglutarate dehydrogenase (OGDH)
+ and branched-chain 2-oxo acid...; Region: lipoyl_domain;
+ cd06849"
+ /db_xref="CDD:133458"
+ misc_feature complement(order(2143056..2143058,2143068..2143085,
+ 2143104..2143106))
+ /locus_tag="SARI_02211"
+ /note="E3 interaction surface; other site"
+ /db_xref="CDD:133458"
+ misc_feature complement(2143074..2143076)
+ /locus_tag="SARI_02211"
+ /note="lipoyl attachment site [posttranslational
+ modification]; other site"
+ /db_xref="CDD:133458"
+ misc_feature complement(2142762..2142866)
+ /locus_tag="SARI_02211"
+ /note="e3 binding domain; Region: E3_binding; pfam02817"
+ /db_xref="CDD:202412"
+ misc_feature complement(2141994..2142629)
+ /locus_tag="SARI_02211"
+ /note="2-oxoacid dehydrogenases acyltransferase (catalytic
+ domain); Region: 2-oxoacid_dh; pfam00198"
+ /db_xref="CDD:215782"
+ gene complement(2143220..2146021)
+ /gene="sucA"
+ /locus_tag="SARI_02212"
+ CDS complement(2143220..2146021)
+ /gene="sucA"
+ /locus_tag="SARI_02212"
+ /inference="protein motif:HMMPfam:IPR001017"
+ /inference="protein motif:HMMPfam:IPR005475"
+ /inference="protein motif:HMMPIR:IPR011603"
+ /inference="protein motif:HMMTigr:IPR011603"
+ /inference="protein motif:superfamily:IPR009014"
+ /note="SucA; E1 component of the oxoglutarate
+ dehydrogenase complex which catalyzes the formation of
+ succinyl-CoA from 2-oxoglutarate; SucA catalyzes the
+ reaction of 2-oxoglutarate with dihydrolipoamide
+ succinyltransferase-lipoate to form dihydrolipoamide
+ succinyltransferase-succinyldihydrolipoate and carbon
+ dioxide"
+ /codon_start=1
+ /transl_table=11
+ /product="2-oxoglutarate dehydrogenase E1 component"
+ /protein_id="YP_001571226.1"
+ /db_xref="GI:161504114"
+ /db_xref="InterPro:IPR001017"
+ /db_xref="InterPro:IPR005475"
+ /db_xref="InterPro:IPR009014"
+ /db_xref="InterPro:IPR011603"
+ /translation="MQNSALKAWLDSSYLSGSNQSWIEQLYEDFLTDPDSVDANWRLT
+ FQQLPGTGVKPDQLHSKTREYFRRQALAGSRYSSTISDPDTNVKQVKVLQLINAYRFR
+ GHQHANLDPLGLWKQERVADLDPSFHDLTEADFQETFNVGSFASGKETMKLGELLDAL
+ KQTYCGPIGAEYMHITSTEEKRWIQQRIESGRAAFSADEKKRFLNELTAAEGLERYLG
+ AKFPGAKRFSLEGGDALIPMLKEMVRHAGNSGTREVVLGMAHRGRLNVLINVLGKKPQ
+ DLFDEFAGKHKEHLGTGDVKYHMGFSSDIETEGGLVHLALAFNPSHLEIVSPVVMGSV
+ RARLDRLDEPSSNKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQV
+ GFTTSNPLDARSTPYCTDIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFI
+ DLVCYRRHGHNEADEPSATQPLMYQKIKKHPTPRKIYADKLEADKVATLEDATEMVNL
+ YRDALDAGECVVKEWRPMNMHSFTWSPYLNHEWDENYPNKVEMKRLQELAKRISTVPE
+ AIEMQSRVAKIYGDRQAMAAGEKLFDWGGAENLAYATLVDEGIPVRLSGEDSGRGTFF
+ HRHAVIHNQTNGSTYTPLQHIHSGQGQFKVWDSVLSEEAVLAFEYGYATAEPRTLTIW
+ EAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLLPHGYEGQGPEHSSARLERYLQL
+ CAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSTLDELANGA
+ FQPAIGEIDELDPKAVKRVVMCSGKVYYDLLEQRRKNDQKDVAIVRIEQLYPFPHKAV
+ QETLQPYAHVHDFVWCQEEPLNQGAWYCSQHHFREVVPFGAALRYAGRPASASPAVGY
+ MSVHQKQQQDLVNDALNVD"
+ misc_feature complement(2143229..2146018)
+ /gene="sucA"
+ /locus_tag="SARI_02212"
+ /note="2-oxoglutarate dehydrogenase E1 component;
+ Reviewed; Region: sucA; PRK09404"
+ /db_xref="CDD:236499"
+ misc_feature complement(2144600..2145385)
+ /gene="sucA"
+ /locus_tag="SARI_02212"
+ /note="Thiamine pyrophosphate (TPP) family, E1 of
+ OGDC-like subfamily, TPP-binding module; composed of
+ proteins similar to the E1 component of the 2-oxoglutarate
+ dehydrogenase multienzyme complex (OGDC). OGDC catalyzes
+ the oxidative decarboxylation of...; Region:
+ TPP_E1_OGDC_like; cd02016"
+ /db_xref="CDD:238974"
+ misc_feature complement(order(2144846..2144848,2144852..2144854,
+ 2144945..2144956,2145053..2145055))
+ /gene="sucA"
+ /locus_tag="SARI_02212"
+ /note="TPP-binding site [chemical binding]; other site"
+ /db_xref="CDD:238974"
+ misc_feature complement(2143667..2144248)
+ /gene="sucA"
+ /locus_tag="SARI_02212"
+ /note="Transketolase, pyrimidine binding domain; Region:
+ Transket_pyr; pfam02779"
+ /db_xref="CDD:217226"
+ misc_feature complement(order(2143805..2143807,2143811..2143813,
+ 2143931..2143933,2143937..2143942,2144042..2144044,
+ 2144051..2144056))
+ /gene="sucA"
+ /locus_tag="SARI_02212"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:132915"
+ misc_feature complement(order(2143925..2143930,2144000..2144002,
+ 2144009..2144017,2144021..2144026,2144033..2144035,
+ 2144042..2144044,2144051..2144056))
+ /gene="sucA"
+ /locus_tag="SARI_02212"
+ /note="PYR/PP interface [polypeptide binding]; other site"
+ /db_xref="CDD:132915"
+ misc_feature complement(order(2143937..2143939,2144039..2144041))
+ /gene="sucA"
+ /locus_tag="SARI_02212"
+ /note="TPP binding site [chemical binding]; other site"
+ /db_xref="CDD:132915"
+ gene complement(2146224..2146943)
+ /gene="sdhB"
+ /locus_tag="SARI_02213"
+ CDS complement(2146224..2146943)
+ /gene="sdhB"
+ /locus_tag="SARI_02213"
+ /inference="protein motif:Gene3D:IPR012285"
+ /inference="protein motif:Gene3D:IPR012675"
+ /inference="protein motif:HMMPIR:IPR004489"
+ /inference="protein motif:HMMTigr:IPR004489"
+ /inference="protein motif:ScanRegExp:IPR001450"
+ /inference="protein motif:superfamily:IPR001041"
+ /inference="protein motif:superfamily:IPR009051"
+ /inference="similar to AA sequence:INSD:AAV77911.1"
+ /note="part of four member succinate dehydrogenase enzyme
+ complex that forms a trimeric complex (trimer of
+ tetramers); SdhA/B are the catalytic subcomplex and can
+ exhibit succinate dehydrogenase activity in the absence of
+ SdhC/D which are the membrane components and form
+ cytochrome b556; SdhC binds ubiquinone; oxidizes succinate
+ to fumarate while reducing ubiquinone to ubiquinol; the
+ catalytic subunits are similar to fumarate reductase"
+ /codon_start=1
+ /transl_table=11
+ /product="succinate dehydrogenase iron-sulfur subunit"
+ /protein_id="YP_001571227.1"
+ /db_xref="GI:161504115"
+ /db_xref="InterPro:IPR001041"
+ /db_xref="InterPro:IPR001450"
+ /db_xref="InterPro:IPR004489"
+ /db_xref="InterPro:IPR009051"
+ /db_xref="InterPro:IPR012285"
+ /db_xref="InterPro:IPR012675"
+ /translation="MMKLEFSIYRYNPDVDNAPRMQDYTLEGEEGRDMMLLDALIQLK
+ EKDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALHHPGKKIVIRPLPGLPVIR
+ DLVVDMGQFYAQYEKIKPYLLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSC
+ PSFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLEGMSDAFSVFRCHSIMNCVSVCP
+ KGLNPTRAIGHIKSMLLQRSA"
+ misc_feature complement(2146227..2146931)
+ /gene="sdhB"
+ /locus_tag="SARI_02213"
+ /note="succinate dehydrogenase iron-sulfur subunit;
+ Reviewed; Region: sdhB; PRK05950"
+ /db_xref="CDD:235652"
+ misc_feature complement(2146608..2146928)
+ /gene="sdhB"
+ /locus_tag="SARI_02213"
+ /note="2Fe-2S iron-sulfur cluster binding domain; Region:
+ Fer2_3; pfam13085"
+ /db_xref="CDD:221911"
+ gene complement(2146957..2148723)
+ /gene="sdhA"
+ /locus_tag="SARI_02214"
+ CDS complement(2146957..2148723)
+ /gene="sdhA"
+ /locus_tag="SARI_02214"
+ /inference="protein motif:HMMPfam:IPR003953"
+ /inference="protein motif:HMMPfam:IPR004112"
+ /inference="protein motif:HMMTigr:IPR011281"
+ /inference="protein motif:HMMTigr:IPR014006"
+ /inference="protein motif:ScanRegExp:IPR003952"
+ /inference="protein motif:superfamily:IPR004112"
+ /note="part of four member succinate dehydrogenase enzyme
+ complex that forms a trimeric complex (trimer of
+ tetramers); SdhA/B are the catalytic subcomplex and can
+ exhibit succinate dehydrogenase activity in the absence of
+ SdhC/D which are the membrane components and form
+ cytochrome b556; SdhC binds ubiquinone; oxidizes succinate
+ to fumarate while reducing ubiquinone to ubiquinol"
+ /codon_start=1
+ /transl_table=11
+ /product="succinate dehydrogenase flavoprotein subunit"
+ /protein_id="YP_001571228.1"
+ /db_xref="GI:161504116"
+ /db_xref="InterPro:IPR003952"
+ /db_xref="InterPro:IPR003953"
+ /db_xref="InterPro:IPR004112"
+ /db_xref="InterPro:IPR011281"
+ /db_xref="InterPro:IPR014006"
+ /translation="MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRS
+ HTVSAQGGITVALGNSHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHM
+ GLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTI
+ FSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHIN
+ TGDGVGMALRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERY
+ APNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLESRLPGILELS
+ RTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEQGEDVVIPGLFAVGEIACV
+ SVHGANRLGGNSLLDLVVFGRAAGLHLQESIAEQGVLRDASESDVEGSLERLNRWNNN
+ RNGEDPVAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSSEFNT
+ QRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPERDDANWLCHTLYQPQTESM
+ TRRSVNMEPKLRPAFPPKIRTY"
+ misc_feature complement(2146960..2148723)
+ /gene="sdhA"
+ /locus_tag="SARI_02214"
+ /note="succinate dehydrogenase flavoprotein subunit;
+ Reviewed; Region: sdhA; PRK08958"
+ /db_xref="CDD:181594"
+ misc_feature complement(2147455..2148711)
+ /gene="sdhA"
+ /locus_tag="SARI_02214"
+ /note="L-aspartate oxidase; Provisional; Region: PRK06175"
+ /db_xref="CDD:180442"
+ misc_feature complement(2146960..2147346)
+ /gene="sdhA"
+ /locus_tag="SARI_02214"
+ /note="Fumarate reductase flavoprotein C-term; Region:
+ Succ_DH_flav_C; pfam02910"
+ /db_xref="CDD:217281"
+ gene complement(2148723..2149070)
+ /gene="sdhD"
+ /locus_tag="SARI_02215"
+ CDS complement(2148723..2149070)
+ /gene="sdhD"
+ /locus_tag="SARI_02215"
+ /inference="similar to AA sequence:INSD:AAL19677.1"
+ /note="'KEGG: sty:STY0776 6.7e-55 sdhD; succinate
+ dehydrogenase hydrophobic membrane anchor protein K00242;
+ COG: COG2142 Succinate dehydrogenase, hydrophobic anchor
+ subunit;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="succinate dehydrogenase cytochrome b556 small
+ membrane subunit"
+ /protein_id="YP_001571229.1"
+ /db_xref="GI:161504117"
+ /translation="MVSNASALGRNGVHDFILVRATAIVLTLYIIYMVGFFATSGELT
+ FEVWTSFFSSAFTKVFTLLALFSILIHAWIGMWQVLTDYVKPLAVRLLLQLVIVVALV
+ VYVIYGFVVVWGV"
+ misc_feature complement(<2148822..2149028)
+ /gene="sdhD"
+ /locus_tag="SARI_02215"
+ /note="Succinate:quinone oxidoreductase (SQR) Type C
+ subfamily, Succinate dehydrogenase D (SdhD) subunit; SQR
+ catalyzes the oxidation of succinate to fumarate coupled
+ to the reduction of quinone to quinol. E. coli SQR, a
+ member of this subfamily, reduces the...; Region:
+ SQR_TypeC_SdhD; cd03494"
+ /db_xref="CDD:239574"
+ misc_feature complement(order(2148825..2148827,2148927..2148929,
+ 2148936..2148938,2149011..2149013))
+ /gene="sdhD"
+ /locus_tag="SARI_02215"
+ /note="SdhC subunit interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:239574"
+ misc_feature complement(order(2148846..2148848,2148858..2148860,
+ 2148867..2148869,2148990..2148992,2149002..2149004))
+ /gene="sdhD"
+ /locus_tag="SARI_02215"
+ /note="proximal heme binding site [chemical binding];
+ other site"
+ /db_xref="CDD:239574"
+ misc_feature complement(order(2148942..2148944,2148948..2148950,
+ 2148960..2148962))
+ /gene="sdhD"
+ /locus_tag="SARI_02215"
+ /note="cardiolipin binding site; other site"
+ /db_xref="CDD:239574"
+ misc_feature complement(order(2148825..2148830,2148837..2148839))
+ /gene="sdhD"
+ /locus_tag="SARI_02215"
+ /note="Iron-sulfur protein interface; other site"
+ /db_xref="CDD:239574"
+ misc_feature complement(2148822..2148824)
+ /gene="sdhD"
+ /locus_tag="SARI_02215"
+ /note="proximal quinone binding site [chemical binding];
+ other site"
+ /db_xref="CDD:239574"
+ gene complement(2149064..2149468)
+ /gene="sdhC"
+ /locus_tag="SARI_02216"
+ CDS complement(2149064..2149468)
+ /gene="sdhC"
+ /locus_tag="SARI_02216"
+ /inference="protein motif:HMMPfam:IPR000701"
+ /inference="protein motif:ScanRegExp:IPR000701"
+ /inference="similar to AA sequence:INSD:"
+ /note="'KEGG: spt:SPA2011 7.6e-63 sdhC; succinate
+ dehydrogenase cytochrome b-556 subunit K00241;
+ COG: COG2009 Succinate dehydrogenase/fumarate reductase,
+ cytochrome b subunit;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="succinate dehydrogenase cytochrome b556 large
+ membrane subunit"
+ /protein_id="YP_001571230.1"
+ /db_xref="GI:161504118"
+ /db_xref="InterPro:IPR000701"
+ /translation="MWALFMIRNVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFI
+ AVGILLWLLGTSLSSPEGFQQAADIMDGFLVKFIMWGILTALAYHVIVGIRHMLMDFG
+ YLEETFEAGQRSAKISFVITVVLSLLAGVLVW"
+ misc_feature complement(2149076..2149429)
+ /gene="sdhC"
+ /locus_tag="SARI_02216"
+ /note="Succinate:quinone oxidoreductase (SQR) Type C
+ subfamily, Succinate dehydrogenase C (SdhC) subunit;
+ composed of bacterial SdhC and eukaryotic large cytochrome
+ b binding (CybL) proteins. SQR catalyzes the oxidation of
+ succinate to fumarate coupled to the...; Region:
+ SQR_TypeC_SdhC; cd03499"
+ /db_xref="CDD:239579"
+ misc_feature complement(order(2149166..2149168,2149172..2149174,
+ 2149181..2149183,2149361..2149363,2149382..2149384,
+ 2149391..2149393,2149397..2149405,2149418..2149429))
+ /gene="sdhC"
+ /locus_tag="SARI_02216"
+ /note="Iron-sulfur protein interface; other site"
+ /db_xref="CDD:239579"
+ misc_feature complement(order(2149361..2149363,2149370..2149375,
+ 2149394..2149396))
+ /gene="sdhC"
+ /locus_tag="SARI_02216"
+ /note="proximal quinone binding site [chemical binding];
+ other site"
+ /db_xref="CDD:239579"
+ misc_feature complement(order(2149082..2149084,2149169..2149171,
+ 2149232..2149234,2149280..2149282,2149307..2149312,
+ 2149319..2149321,2149328..2149330,2149361..2149363))
+ /gene="sdhC"
+ /locus_tag="SARI_02216"
+ /note="SdhD (CybS) interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:239579"
+ misc_feature complement(order(2149199..2149204,2149340..2149345,
+ 2149361..2149363))
+ /gene="sdhC"
+ /locus_tag="SARI_02216"
+ /note="proximal heme binding site [chemical binding];
+ other site"
+ /db_xref="CDD:239579"
+ unsure 2149647..2149737
+ /note="Sequence derived from one plasmid subclone"
+ gene 2150208..2151491
+ /gene="gltA"
+ /locus_tag="SARI_02217"
+ CDS 2150208..2151491
+ /gene="gltA"
+ /locus_tag="SARI_02217"
+ /inference="protein motif:FPrintScan:IPR002020"
+ /inference="protein motif:HMMPanther:IPR002020"
+ /inference="protein motif:HMMPfam:IPR002020"
+ /inference="protein motif:HMMTigr:IPR010953"
+ /inference="protein motif:ScanRegExp:IPR002020"
+ /inference="similar to AA sequence:REFSEQ:YP_215723.1"
+ /note="'type II enzyme; in Escherichia coli this enzyme
+ forms a trimer of dimers which is allosterically inhibited
+ by NADH and competitively inhibited by
+ alpha-ketoglutarate; allosteric inhibition is lost when
+ Cys206 is chemically modified which also affects hexamer
+ formation; forms oxaloacetate and acetyl-CoA and water
+ from citrate and coenzyme A; functions in TCA cycle,
+ glyoxylate cycle and respiration; enzyme from Helicobacter
+ pylori is not inhibited by NADH'"
+ /codon_start=1
+ /transl_table=11
+ /product="type II citrate synthase"
+ /protein_id="YP_001571231.1"
+ /db_xref="GI:161504119"
+ /db_xref="InterPro:IPR002020"
+ /db_xref="InterPro:IPR010953"
+ /translation="MADKKAKITLTGDTAIELDVLKGTLGQDVIDIRSLGSKGVFTFD
+ PGFTSTASCESKITFIDGDEGILLHRGFPIDQLATDSNYLEVCYILLYGEKPTQEEYD
+ EFRTTVTRHTMIHEQITRLFHAFRRDSHPMAVMCGITGALAAFYHDSLDVNNPRHREI
+ AAFRLLSKMPTMAAMCYKYSIGQPFVYPRNDLSYAGNFLNMMFSTPCETYEVNPVLER
+ AMDRILILHADHEQNASTSTVRTAGSSGANPFACIAAGIASLWGPAHGGANEAALKML
+ EEISSVKHIPEFVRRAKDKNDSFRLMGFGHRVYKNYDPRATVMRETCHEVLKELGTKD
+ DLLEVAMELEHIALNDPYFIEKKLYPNVDFYSGIILKAMGIPSSMFTVIFAMARTVGW
+ IAHWNEMHSEGMKIARPRQLYTGYEKRDFKSALKR"
+ misc_feature 2150259..2151452
+ /gene="gltA"
+ /locus_tag="SARI_02217"
+ /note="Escherichia coli (Ec) citrate synthase (CS)
+ GltA_like. CS catalyzes the condensation of acetyl
+ coenzyme A (AcCoA) and oxalacetate (OAA) to form citrate
+ and coenzyme A (CoA), the first step in the citric acid
+ cycle (TCA or Krebs cycle). The overall CS...; Region:
+ EcCS_like; cd06114"
+ /db_xref="CDD:99867"
+ misc_feature 2150289..2151488
+ /gene="gltA"
+ /locus_tag="SARI_02217"
+ /note="Citrate synthase [Energy production and
+ conversion]; Region: GltA; COG0372"
+ /db_xref="CDD:223449"
+ misc_feature order(2150325..2150375,2150379..2150381,2150415..2150426,
+ 2150433..2150435,2150445..2150447,2150460..2150462,
+ 2150484..2150495,2150499..2150501,2150508..2150513,
+ 2150520..2150525,2150556..2150558,2150565..2150570,
+ 2150574..2150582,2150592..2150594,2150604..2150606,
+ 2150616..2150618,2150625..2150627,2150634..2150642,
+ 2150895..2150909,2150916..2150921,2150931..2150933,
+ 2150940..2150951,2150958..2150960,2150979..2150984,
+ 2150988..2151005,2151009..2151014,2151126..2151131,
+ 2151420..2151422,2151426..2151452)
+ /gene="gltA"
+ /locus_tag="SARI_02217"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:99867"
+ misc_feature order(2150349..2150351,2150895..2150897,2150904..2150906,
+ 2150997..2151005,2151009..2151011,2151018..2151020,
+ 2151105..2151128,2151135..2151137,2151150..2151152,
+ 2151273..2151275,2151279..2151281,2151288..2151290,
+ 2151294..2151296,2151357..2151359,2151369..2151371,
+ 2151420..2151422,2151429..2151431)
+ /gene="gltA"
+ /locus_tag="SARI_02217"
+ /note="active site"
+ /db_xref="CDD:99867"
+ misc_feature order(2150349..2150351,2150895..2150897,2150904..2150906,
+ 2150997..2151002,2151105..2151110,2151114..2151128,
+ 2151150..2151152,2151288..2151290,2151369..2151371)
+ /gene="gltA"
+ /locus_tag="SARI_02217"
+ /note="citrylCoA binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:99867"
+ misc_feature order(2150526..2150528,2150532..2150552,2150643..2150645,
+ 2150697..2150699,2150709..2150711,2150775..2150777)
+ /gene="gltA"
+ /locus_tag="SARI_02217"
+ /note="NADH binding [chemical binding]; other site"
+ /db_xref="CDD:99867"
+ misc_feature order(2150541..2150567,2150574..2150591,2150742..2150780,
+ 2150820..2150825)
+ /gene="gltA"
+ /locus_tag="SARI_02217"
+ /note="cationic pore residues; other site"
+ /db_xref="CDD:99867"
+ misc_feature order(2150895..2150897,2150904..2150906,2151000..2151005,
+ 2151123..2151125,2151150..2151152,2151294..2151296,
+ 2151357..2151359,2151369..2151371,2151429..2151431)
+ /gene="gltA"
+ /locus_tag="SARI_02217"
+ /note="oxalacetate/citrate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:99867"
+ misc_feature order(2150997..2151002,2151009..2151011,2151018..2151020,
+ 2151105..2151122,2151126..2151128,2151135..2151137,
+ 2151273..2151275,2151279..2151281,2151288..2151290,
+ 2151294..2151296,2151420..2151422)
+ /gene="gltA"
+ /locus_tag="SARI_02217"
+ /note="coenzyme A binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:99867"
+ misc_feature order(2151000..2151002,2151123..2151125,2151294..2151296)
+ /gene="gltA"
+ /locus_tag="SARI_02217"
+ /note="catalytic triad [active]"
+ /db_xref="CDD:99867"
+ gene 2151626..2152672
+ /locus_tag="SARI_02218"
+ CDS 2151626..2152672
+ /locus_tag="SARI_02218"
+ /inference="protein motif:HMMPfam:IPR007820"
+ /inference="protein motif:ScanRegExp:IPR002155"
+ /inference="similar to AA sequence:INSD:AAL19673.1"
+ /note="'COG: COG3180 Putative ammonia monooxygenase;
+ Psort location: endoplasmic reticulum, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571232.1"
+ /db_xref="GI:161504120"
+ /db_xref="InterPro:IPR002155"
+ /db_xref="InterPro:IPR007820"
+ /translation="MPILQWFLLFLLSLLISLIFLWLHLPAAMLLGPMIAGIVFSLRG
+ CSLQLPRGIFLAAQAILGCMIAQNLTGSLLTTLALYWPVVLLVLLITLLSSAIVGWLL
+ VRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRL
+ ILGDSAIAVSQQKSWFPPLSGNLLTTLLLAIVAGIAGRLMRIPSGTMLLPMLAGALLH
+ SHGIIEIELPEWLLAVAYMAIGWRIGLGFDKQVFFMALRPLPQILFSIFALMAICAAM
+ AWGMARYMQIDFMTAYLATSPGGLDTVAAIAVGSSADMALIMAMQTLRLFSILLAGPT
+ VARFISTYAPKQSA"
+ misc_feature 2151701..2152660
+ /locus_tag="SARI_02218"
+ /note="Putative ammonia monooxygenase [General function
+ prediction only]; Region: AbrB; COG3180"
+ /db_xref="CDD:225721"
+ misc_feature 2151701..2152108
+ /locus_tag="SARI_02218"
+ /note="membrane protein AbrB duplication; Region:
+ Gneg_AbrB_dup; TIGR03082"
+ /db_xref="CDD:213773"
+ misc_feature 2152193..2152642
+ /locus_tag="SARI_02218"
+ /note="membrane protein AbrB duplication; Region:
+ Gneg_AbrB_dup; TIGR03082"
+ /db_xref="CDD:213773"
+ gene complement(2152679..2153470)
+ /locus_tag="SARI_02219"
+ CDS complement(2152679..2153470)
+ /locus_tag="SARI_02219"
+ /inference="protein motif:BlastProDom:IPR000191"
+ /inference="protein motif:HMMPfam:IPR000191"
+ /inference="protein motif:HMMPfam:IPR010663"
+ /inference="protein motif:ScanRegExp:IPR000214"
+ /inference="protein motif:superfamily:IPR010979"
+ /inference="similar to AA sequence:REFSEQ:YP_151230.1"
+ /note="5-formyluracil/5-hydroxymethyluracil DNA
+ glycosylase; involved in base excision repair of DNA
+ damaged by oxidation or by mutagenic agents; acts as DNA
+ glycosylase that recognizes and removes damaged bases with
+ a preference for oxidized pyrimidines; has
+ apurinic/apyrimidinic lyase activity"
+ /codon_start=1
+ /transl_table=11
+ /product="endonuclease VIII"
+ /protein_id="YP_001571233.1"
+ /db_xref="GI:161504121"
+ /db_xref="InterPro:IPR000191"
+ /db_xref="InterPro:IPR000214"
+ /db_xref="InterPro:IPR010663"
+ /db_xref="InterPro:IPR010979"
+ /translation="MPEGPEIRRAADHLEAAIKGKLLTDVWFAFAQLKPYESQLTGQM
+ VTRIETRGKALLTHFSNGLTLYSHNQLYGVWRVIDTGEIPHTTRILRVRLQTADKTIL
+ LYSASDIEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLD
+ QAFLAGLGNYLRVEILWQSELTGQHKAKDLSEAQLNTLSHALLDIPRLSYATRGQTDE
+ NKHHGAQFRFKVFHRDGEACERCGGIIEKTTLSSRPFYWCPHCQK"
+ misc_feature complement(2152682..2153470)
+ /locus_tag="SARI_02219"
+ /note="endonuclease VIII; Provisional; Region: PRK10445"
+ /db_xref="CDD:182467"
+ misc_feature complement(2153123..2153467)
+ /locus_tag="SARI_02219"
+ /note="N-terminal domain of Escherichia coli
+ Nei/endonuclease VIII and related DNA glycosylases;
+ Region: EcNei-like_N; cd08965"
+ /db_xref="CDD:176799"
+ misc_feature complement(order(2153150..2153152,2153156..2153158,
+ 2153198..2153200,2153204..2153212,2153255..2153263,
+ 2153267..2153269,2153312..2153314,2153462..2153467))
+ /locus_tag="SARI_02219"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:176799"
+ misc_feature complement(2153465..2153467)
+ /locus_tag="SARI_02219"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:176799"
+ misc_feature complement(order(2153312..2153314,2153462..2153464))
+ /locus_tag="SARI_02219"
+ /note="putative catalytic residues [active]"
+ /db_xref="CDD:176799"
+ misc_feature complement(order(2153312..2153323,2153435..2153437,
+ 2153444..2153449,2153453..2153464))
+ /locus_tag="SARI_02219"
+ /note="H2TH interface [polypeptide binding]; other site"
+ /db_xref="CDD:176799"
+ misc_feature complement(2153255..2153263)
+ /locus_tag="SARI_02219"
+ /note="intercalation triad [nucleotide binding]; other
+ site"
+ /db_xref="CDD:176799"
+ misc_feature complement(2153201..2153203)
+ /locus_tag="SARI_02219"
+ /note="substrate specificity determining residue; other
+ site"
+ /db_xref="CDD:176799"
+ misc_feature complement(2152856..2153095)
+ /locus_tag="SARI_02219"
+ /note="Formamidopyrimidine-DNA glycosylase H2TH domain;
+ Region: H2TH; pfam06831"
+ /db_xref="CDD:115485"
+ misc_feature complement(2152682..2152768)
+ /locus_tag="SARI_02219"
+ /note="Zinc finger found in FPG and IleRS; Region:
+ zf-FPG_IleRS; pfam06827"
+ /db_xref="CDD:203527"
+ gene complement(2153854..2154000)
+ /locus_tag="SARI_02221"
+ CDS complement(2153854..2154000)
+ /locus_tag="SARI_02221"
+ /note="'Psort location: cytoskeletal, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571234.1"
+ /db_xref="GI:161504123"
+ /translation="MFCQFHYILPVAINHPVSVESRRQARVTRFLQQSSDKWMTGPLL
+ EKLM"
+ gene 2153956..2154147
+ /locus_tag="SARI_02220"
+ CDS 2153956..2154147
+ /locus_tag="SARI_02220"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571235.1"
+ /db_xref="GI:161504122"
+ /translation="MIYGNRQDIVKLTEQFSSIMRLRLCNKSARIISPSFLTFYDLIL
+ KGVDKLVINLFDITLVIFK"
+ gene complement(2154263..2154997)
+ /locus_tag="SARI_02222"
+ CDS complement(2154263..2154997)
+ /locus_tag="SARI_02222"
+ /inference="protein motif:HMMPfam:IPR005501"
+ /inference="similar to AA sequence:SwissProt:Q8ZQV6"
+ /note="'COG: COG1540 Uncharacterized proteins, homologs of
+ lactam utilization protein B;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="LamB/YcsF family protein"
+ /protein_id="YP_001571236.1"
+ /db_xref="GI:161504124"
+ /db_xref="InterPro:IPR005501"
+ /translation="MKIDLNADLGEGFASDSELLTLVSSANIACGFHAGDAQTMLTCV
+ REALKNGVAIGAHPSFPDRDNFGRTAMVLPPETVYAQTLYQIGALGAIVQAQGGVMRH
+ VKPHGMLYNQAAKDPRLAQAIAKAVHDYDSSLILVGLAGSELIRAGERYRLATRQEVF
+ ADRGYQADGSLVPRTQPGALILDEGQALAQTLGMVQAGRVKSVTGVWTNVTAQTVCIH
+ GDGEYALAFARRLRAAFNARNIHVSF"
+ misc_feature complement(2154329..2154991)
+ /locus_tag="SARI_02222"
+ /note="Escherichia coli putative lactam utilization
+ protein YbgL and similar proteins; Region:
+ LamB_YcsF_YbgL_like; cd10800"
+ /db_xref="CDD:212111"
+ misc_feature complement(order(2154344..2154346,2154476..2154478,
+ 2154485..2154487,2154509..2154511,2154518..2154520,
+ 2154665..2154667,2154677..2154682,2154686..2154688,
+ 2154794..2154796,2154827..2154829,2154974..2154976))
+ /locus_tag="SARI_02222"
+ /note="putative active site [active]"
+ /db_xref="CDD:212111"
+ unsure 2154398..2154450
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(2154987..2155919)
+ /locus_tag="SARI_02223"
+ CDS complement(2154987..2155919)
+ /locus_tag="SARI_02223"
+ /inference="protein motif:HMMPfam:IPR003778"
+ /inference="protein motif:HMMSmart:IPR003778"
+ /inference="protein motif:HMMTigr:IPR003778"
+ /inference="similar to AA sequence:REFSEQ:YP_215719.1"
+ /note="'KEGG: eci:UTI89_C0710 2.0e-142 ybgK; hypothetical
+ protein K01941;
+ COG: COG1984 Allophanate hydrolase subunit 2;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571237.1"
+ /db_xref="GI:161504125"
+ /db_xref="InterPro:IPR003778"
+ /translation="MLNIIRAGIYTSVQDSGRHGFRQAGLSHCGALDKPAFQTANLLV
+ GNDANAPGLEITLGQLVVEFENESWFALTGAGCEAQLDNQPVWTGWRLPVKAGQRLTL
+ HRPLHGMRSYLAVAGGIAVPEVMGSCSTDLKSGIGGLEGRLLKDGDRLATGNPSRHFS
+ GPQGVKQLLWGNRIRALPGPEYREFDRASQEAFWRSPWQLSPQSNRMGYRLQGQSLKR
+ TTDRELLSHGLLPGVVQVPSNGQPIVLMNDAQTTGGYPRIACIIEADMYHLAQVPLGQ
+ PIHFVQCSLEEALNARRERQRYLEQLTWRLQHEN"
+ misc_feature complement(2154990..2155916)
+ /locus_tag="SARI_02223"
+ /note="Allophanate hydrolase subunit 2 [Amino acid
+ transport and metabolism]; Region: DUR1; COG1984"
+ /db_xref="CDD:224895"
+ gene complement(2155913..2156569)
+ /locus_tag="SARI_02224"
+ CDS complement(2155913..2156569)
+ /locus_tag="SARI_02224"
+ /inference="protein motif:HMMPfam:IPR003833"
+ /inference="protein motif:HMMSmart:IPR003833"
+ /inference="protein motif:HMMTigr:IPR010016"
+ /inference="similar to AA sequence:REFSEQ:YP_151243.1"
+ /note="'KEGG: eci:UTI89_C0709 6.0e-102 ybgJ; hypothetical
+ protein YbgJ K01457;
+ COG: COG2049 Allophanate hydrolase subunit 1;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571238.1"
+ /db_xref="GI:161504126"
+ /db_xref="InterPro:IPR003833"
+ /db_xref="InterPro:IPR010016"
+ /translation="MQRARCYLLGETAVVLELEPPITLASQKRIWRLTQRLVDMPNVV
+ EAIPGMNNITVILREPQTLALDAIERLQRWWEESEALEPDSRSVEIPVIYGGAGGPDL
+ AEVARHSGLSEKQVVELHASVEYVVWFLGFQPGFPYLGNLPEPLHMPRRAEPRLQVPA
+ GSVGIGGAQTGIYPLSTPGGWQLIGLTPLKLFDPIREPPVLLRPGDSVRFVPQKEGVC
+ "
+ misc_feature complement(2155964..2156557)
+ /locus_tag="SARI_02224"
+ /note="Allophanate hydrolase subunit 1; Region: AHS1;
+ pfam02682"
+ /db_xref="CDD:217182"
+ misc_feature complement(2155937..2156545)
+ /locus_tag="SARI_02224"
+ /note="Allophanate hydrolase subunit 1 [Amino acid
+ transport and metabolism]; Region: DUR1; cl00896"
+ /db_xref="CDD:242178"
+ gene complement(2156585..2157331)
+ /locus_tag="SARI_02225"
+ CDS complement(2156585..2157331)
+ /locus_tag="SARI_02225"
+ /inference="protein motif:HMMPfam:IPR002678"
+ /inference="protein motif:HMMTigr:IPR002678"
+ /inference="similar to AA sequence:SwissProt:P67271"
+ /note="'COG: COG0327 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative hydrolase-oxidase"
+ /protein_id="YP_001571239.1"
+ /db_xref="GI:161504127"
+ /db_xref="InterPro:IPR002678"
+ /translation="MMKNTELEQLINDKLNSAAISDYAPNGLQVEGKETVQKIVTGVT
+ ASQALLDEAVRLQADAVIVHHGYFWKGESPVIRGMKRRRLKTLLANDINLYGWHLPLD
+ AHPELGNNAQLATLLGITVKGEVEPLVPWGELSMPVPGLELASWIEARLGRKPLWCGD
+ TGPENVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHA
+ TERGGIRALSEWLNENTELDVTFIDIPNPA"
+ misc_feature complement(2156588..2157328)
+ /locus_tag="SARI_02225"
+ /note="Uncharacterized conserved protein [Function
+ unknown]; Region: COG0327"
+ /db_xref="CDD:223404"
+ misc_feature complement(2156588..2157328)
+ /locus_tag="SARI_02225"
+ /note="metal-binding protein; Provisional; Region:
+ PRK10799"
+ /db_xref="CDD:182741"
+ gene 2157654..2159138
+ /locus_tag="SARI_02226"
+ CDS 2157654..2159138
+ /locus_tag="SARI_02226"
+ /inference="protein motif:HMMPanther:IPR000109"
+ /inference="protein motif:HMMPanther:IPR005279"
+ /inference="protein motif:HMMPfam:IPR000109"
+ /inference="protein motif:HMMTigr:IPR005279"
+ /inference="protein motif:ScanRegExp:IPR000109"
+ /inference="similar to AA sequence:INSD:AAL19654.1"
+ /note="'KEGG: ace:Acel_1973 0.0034 V-type
+ H(+)-translocating pyrophosphatase K01507;
+ COG: COG3104 Dipeptide/tripeptide permease;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571240.1"
+ /db_xref="GI:161504128"
+ /db_xref="InterPro:IPR000109"
+ /db_xref="InterPro:IPR005279"
+ /translation="MMNKQASQPHAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYD
+ DNHAYALFSAYCSLVYVTPILGGYLADKVLGNRMAVMLGAFLMAVGHLVLGASEIAPA
+ FLYLSLAIIVCGYGLFKSNISCLLGELYQPEDPRRDGGFSLLYAAGNIGSIVAPIACG
+ YVQEEYSWAMGFALAAIGMLAGLVIFLCGNRHFTHTTGVNKAALRARNYLLPNWGWLL
+ ILLVAAPLLITVLFWKEWAVYALIVATAIGLVVLTKIYRQAQTAKQRKELGLIVTLTL
+ FSMLFWAFAQQGGSSISLYIDRFVNRDILGYSVPTAMFQSVNAFAVMLCGVVLAWLVK
+ ESVSGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAAYGHSSMPLMVLGLAVMGFAE
+ LFIDPVAMSQITRIDIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQSAFDASGAVN
+ YAINAYVDVFEQITWGALACVGVVLLIWLYQSFKFKSRSLAVES"
+ misc_feature 2157657..2159135
+ /locus_tag="SARI_02226"
+ /note="Dipeptide/tripeptide permease [Amino acid transport
+ and metabolism]; Region: PTR2; COG3104"
+ /db_xref="CDD:225646"
+ misc_feature 2157687..>2158232
+ /locus_tag="SARI_02226"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature order(2157729..2157731,2157738..2157746,2157750..2157755,
+ 2157807..2157809,2157816..2157821,2157828..2157830,
+ 2157840..2157845,2157849..2157854,2157996..2158001,
+ 2158008..2158013,2158020..2158025,2158032..2158034,
+ 2158074..2158079,2158086..2158091,2158107..2158109)
+ /locus_tag="SARI_02226"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ misc_feature 2157882..2158934
+ /locus_tag="SARI_02226"
+ /note="POT family; Region: PTR2; pfam00854"
+ /db_xref="CDD:216153"
+ gene complement(2159177..2160598)
+ /locus_tag="SARI_02227"
+ CDS complement(2159177..2160598)
+ /locus_tag="SARI_02227"
+ /inference="protein motif:BlastProDom:IPR006051"
+ /inference="protein motif:FPrintScan:IPR002081"
+ /inference="protein motif:HMMPfam:IPR005101"
+ /inference="protein motif:HMMPfam:IPR006050"
+ /inference="protein motif:ScanRegExp:IPR002081"
+ /inference="protein motif:superfamily:IPR006050"
+ /inference="similar to AA sequence:SwissProt:P25078"
+ /note="UV-induced DNA repair; converts cyclobutane-type
+ pyrimidine dimers created during exposure to UV ratiation
+ to monomers; light dependent"
+ /codon_start=1
+ /transl_table=11
+ /product="deoxyribodipyrimidine photolyase"
+ /protein_id="YP_001571241.1"
+ /db_xref="GI:161504129"
+ /db_xref="InterPro:IPR002081"
+ /db_xref="InterPro:IPR005101"
+ /db_xref="InterPro:IPR006050"
+ /db_xref="InterPro:IPR006051"
+ /translation="MPTHLVWFRRDLRLQDNLALAAACRDASARVLALYIATPAQWQA
+ HDMAPRQAAFISAQLNALQTALAEKGIPLLFHEVADFSASIETVKNVCRQHDVSHLFY
+ NYEYEVNERQRDAAVEKALQSVICEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLK
+ RLKEDIPPCVPAPKIRASGALSTPLTPVSLNYPQQAFDAALFPVEENAAIAQLRQFCA
+ QGADGYASRRDFPAVEGTSRLSASLATGGLSPRQCLHRLLAEQPQALDGGPGSVWLNE
+ LIWREFYRHLMTWYPALCKHQPFIRWTKRVTWQENPHYFQAWRKGETGYPIVDAAMRQ
+ LNATGWMHNRLRMITASFLVKDLLIDWRLGERYFMSQLIDGDLAANNGGWQWAASTGT
+ DAAPYFRIFNPTTQGERFDRDGEFIRQWLPALRDIPGKAIHEPWRWAEKAGVVLDYPR
+ PIVDHKQARIATLSAYEAARKGG"
+ misc_feature complement(2159180..2160598)
+ /locus_tag="SARI_02227"
+ /note="deoxyribodipyrimidine photolyase; Provisional;
+ Region: PRK10674"
+ /db_xref="CDD:236734"
+ misc_feature complement(2160095..2160586)
+ /locus_tag="SARI_02227"
+ /note="DNA photolyase; Region: DNA_photolyase; pfam00875"
+ /db_xref="CDD:216167"
+ gene complement(2160709..2161389)
+ /locus_tag="SARI_02228"
+ CDS complement(2160709..2161389)
+ /locus_tag="SARI_02228"
+ /inference="similar to AA sequence:REFSEQ:ZP_00700962.1"
+ /note="'COG: NOG36642 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571242.1"
+ /db_xref="GI:161504130"
+ /translation="MIKIQSGVTTILMLTLLLCAEIPVHAADKKLTSLLAPYDEWYFN
+ FLYPNALPADVTYVELLDTDGILYRYRMLGSTNASSASVGKWNEEVMGIHSDFNKAKN
+ PPQAMHFCWDSIIDKKVYETWITFGYPVWEMMLTPYSSPWDASVQEYHRYLVIGLAPE
+ GRVRVWLVNNGKPNTRLTEDKDILVETVSGEKLAMCKKITNHSFSGGYNDYILNFIKD
+ KKYPYGNW"
+ misc_feature complement(2160718..>2161101)
+ /locus_tag="SARI_02228"
+ /note="Protein of unknown function (DUF2931); Region:
+ DUF2931; pfam11153"
+ /db_xref="CDD:221005"
+ gene complement(2161393..2162055)
+ /locus_tag="SARI_02229"
+ CDS complement(2161393..2162055)
+ /locus_tag="SARI_02229"
+ /inference="similar to AA sequence:REFSEQ:ZP_00700962.1"
+ /note="'COG: NOG36642 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571243.1"
+ /db_xref="GI:161504131"
+ /translation="MTRNFRLLLLGGLLGLSMTATSKELTSLLAPYDEWYFNFFYPNA
+ LPADVTYVELLDTDGILYRYRMLDSTIPSSTTVAEWEDDLSVGMASFNKAKNPPQAMH
+ FCWDSIIDKKVYETWITFGYPVWEMMLTPYPSPWDASIQEYRRYLLIGLAPEGRVRVW
+ LENTKKPNTRLTEDKDILVETVSGEKLAMCKGVTRFSRGYKYIKETEDFIKDKKYPYG
+ NW"
+ misc_feature complement(2161402..2161818)
+ /locus_tag="SARI_02229"
+ /note="Protein of unknown function (DUF2931); Region:
+ DUF2931; pfam11153"
+ /db_xref="CDD:221005"
+ gene complement(2162052..2164045)
+ /locus_tag="SARI_02230"
+ /pseudogene="unknown"
+ gene complement(2164383..2164589)
+ /locus_tag="SARI_02234"
+ CDS complement(2164383..2164589)
+ /locus_tag="SARI_02234"
+ /inference="similar to AA sequence:INSD:AAV77935.1"
+ /note="'COG: NOG13868 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571248.1"
+ /db_xref="GI:161504136"
+ /translation="MERYKDYPAHVIFVRRAFAVTAGVLALPVMLFWKDRARFYSYLH
+ RVWSKTSDKPVWMAQAEKATCDFY"
+ misc_feature complement(2164395..2164580)
+ /locus_tag="SARI_02234"
+ /note="Protein of unknown function (DUF2517); Region:
+ DUF2517; pfam10725"
+ /db_xref="CDD:119245"
+ gene 2165015..2166694
+ /locus_tag="SARI_02235"
+ CDS 2165015..2166694
+ /locus_tag="SARI_02235"
+ /inference="protein motif:HMMPfam:IPR004623"
+ /inference="protein motif:HMMTigr:IPR004623"
+ /inference="similar to AA sequence:SwissProt:Q5PCJ8"
+ /note="catalyzes the hydrolysis of ATP coupled with the
+ exchange of hydrogen and potassium ions"
+ /codon_start=1
+ /transl_table=11
+ /product="potassium-transporting ATPase subunit A"
+ /protein_id="YP_001571249.1"
+ /db_xref="GI:161504137"
+ /db_xref="InterPro:IPR004623"
+ /translation="MAAQGSLLIASFLLILLVLAKPLGSGLARLIAASPLPGVAGVER
+ VLWRTLGITGHEMNWRQYLLALLTLNLLGLSILFCLLFWQEWLPLNPQRLPGLSWDLA
+ LNTAVSFVTNTNWQAYSGESTLSYFSQMAGLTVQNFLSAATGIAVVFALIRAFTRQNM
+ HTLGNAWQDLVRITLWILFPVALIIALFFIQQGVLQNLSAYQPITTLEGAQQLLPMGP
+ VASQEAIKMLGTNGGGFFNANSSHPFENPTALTNMVQMLAIFLIPAALCFAFGEAAGD
+ RRQGRALLWAMSFIFVVCVAVVMWAEVQGNPHLLTAGADSSVNMEGKETRFGVLASSL
+ FAVVTTAASCGAVDAMHDSFTALGGMVPMWLMQIGEVVFGGVGSGLYGMLLFVLLAVF
+ IAGLMIGRTPEYLGKKIDVREMKMTALAILVTPMLVLLGSALAMMTDAGRSAMLNPGP
+ HGFSEVLYAVSSAANNNGSAFAGLSANSPFWNCLLAFCMFVGRFGVIIPVMAIAGSLV
+ SKKAQPASQGTLATHGALFIGLLIGTVLLVGALTFIPALALGPVAEHFSLP"
+ misc_feature 2165015..2166688
+ /locus_tag="SARI_02235"
+ /note="potassium-transporting ATPase subunit A;
+ Provisional; Region: PRK05482"
+ /db_xref="CDD:235494"
+ gene 2166691..2168763
+ /locus_tag="SARI_02236"
+ CDS 2166691..2168763
+ /locus_tag="SARI_02236"
+ /inference="protein motif:FPrintScan:IPR001757"
+ /inference="protein motif:HMMPanther:IPR001757"
+ /inference="protein motif:HMMPfam:IPR005834"
+ /inference="protein motif:HMMPfam:IPR008250"
+ /inference="protein motif:HMMTigr:IPR001757"
+ /inference="protein motif:HMMTigr:IPR006391"
+ /inference="protein motif:ScanRegExp:IPR001757"
+ /note="'One of the components of the high-affinity
+ ATP-driven potassium transport (or KDP) system, which
+ catalyzes the hydrolysis of ATP coupled with the exchange
+ of hydrogen and potassium ions'"
+ /codon_start=1
+ /transl_table=11
+ /product="potassium-transporting ATPase subunit B"
+ /protein_id="YP_001571250.1"
+ /db_xref="GI:161504138"
+ /db_xref="InterPro:IPR001757"
+ /db_xref="InterPro:IPR005834"
+ /db_xref="InterPro:IPR006391"
+ /db_xref="InterPro:IPR008250"
+ /translation="MSDVEYIDMSRKQLALFEPVLLVQALTDAVKKLSPRAQWRNPVM
+ FVVWAGSVLTTLLTLAMVTGQIAGSALFTGVISLWLWFTVLFANFAEALAEGRSKAQA
+ NSLKGVKKTAFARRLRAPRHDAQADNVPAAELRKGDIVLVNAGEIIPCDGEVIEGGAS
+ VDESAITGESAPVIRESGGDFASVTGGTRILSDWLVIACSVNPGETFLDRMIAMVEGA
+ QRRKTPNEIALTILLIALTMVFLLTTATLWPFSAWGGNAVSVTVLVALLVCLIPTTIG
+ GLLSAIGVAGMSRMLGANVIATSGRAVEAAGDVDVLLLDKTGTITLGNRQASDFIPAQ
+ GVDERTLADAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMS
+ GINIDNRLIRKGSVDAIRRHVESNGGHFPADVEQNVESVARLGATPLVVVEGTRVLGV
+ IALKDIVKGGIKERFAQLRKMGIKTVMITGDNRLTAAAIAAEAGVDDFLAEATPEAKL
+ ALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNMVDLDSNPTKL
+ IEVVHIGKQMLMTRGSLTTFSIANDVAKYFAIIPAAFAATYPQLNALNVMGLHSPNSA
+ ILSAVIFNALIIIFLIPLALKGVSYKPLSASAMLRRNLWIYGLGGLVVPFIGIKVIDV
+ LLTLLGLA"
+ misc_feature 2166715..2168760
+ /locus_tag="SARI_02236"
+ /note="potassium-transporting ATPase subunit B;
+ Provisional; Region: PRK01122"
+ /db_xref="CDD:234905"
+ misc_feature 2166928..2167605
+ /locus_tag="SARI_02236"
+ /note="E1-E2 ATPase; Region: E1-E2_ATPase; pfam00122"
+ /db_xref="CDD:215733"
+ gene 2168769..2169356
+ /locus_tag="SARI_02237"
+ CDS 2168769..2169356
+ /locus_tag="SARI_02237"
+ /inference="protein motif:HMMPfam:IPR003820"
+ /inference="protein motif:HMMTigr:IPR003820"
+ /inference="similar to AA sequence:REFSEQ:YP_151251.1"
+ /note="'One of the components of the high-affinity
+ ATP-driven potassium transport (or KDP)system, which
+ catalyzes the hydrolysis of ATP coupled with the exchange
+ of hydrogen and potassium ions. The C subunit may be
+ involved in assembly of the KDP complex'"
+ /codon_start=1
+ /transl_table=11
+ /product="potassium-transporting ATPase subunit C"
+ /protein_id="YP_001571251.1"
+ /db_xref="GI:161504139"
+ /db_xref="InterPro:IPR003820"
+ /translation="MMIGLRPAFSTMLFLLLLTGGVYPLLTTALGQWWFPWQANGSLI
+ HKDNVIRGSALIGQSFTAAGYFHGRPSATADTPYNPLASGGSNLAASNPELDAQIQAR
+ VAALRAANPQASSAVPVELATASASGLDNNLTPGAAAWQIPRVAAARQLPVEQVAQLV
+ AEYTHRPLARFLGQPVVNIVELNLALDALQGHRAK"
+ misc_feature 2168769..2169347
+ /locus_tag="SARI_02237"
+ /note="potassium-transporting ATPase subunit C; Reviewed;
+ Region: PRK00315"
+ /db_xref="CDD:234724"
+ gene 2169353..2172037
+ /locus_tag="SARI_02238"
+ CDS 2169353..2172037
+ /locus_tag="SARI_02238"
+ /inference="protein motif:BlastProDom:IPR013811"
+ /inference="protein motif:Gene3D:IPR003594"
+ /inference="protein motif:Gene3D:IPR006016"
+ /inference="protein motif:HMMPfam:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003661"
+ /inference="protein motif:HMMPfam:IPR003852"
+ /inference="protein motif:HMMPfam:IPR006016"
+ /inference="protein motif:HMMSmart:IPR003594"
+ /inference="protein motif:HMMSmart:IPR003661"
+ /inference="protein motif:superfamily:IPR003594"
+ /note="sensory histidine kinase in two-component
+ regulatory system with KdpE; signal sensing protein"
+ /codon_start=1
+ /transl_table=11
+ /product="sensor protein KdpD"
+ /protein_id="YP_001571252.1"
+ /db_xref="GI:161504140"
+ /db_xref="InterPro:IPR003594"
+ /db_xref="InterPro:IPR003661"
+ /db_xref="InterPro:IPR003852"
+ /db_xref="InterPro:IPR006016"
+ /db_xref="InterPro:IPR013811"
+ /translation="MNDEPLRPDPDRLLEQTPPPHRGKLKIFFGACAGVGKTWAMLAQ
+ AQRLRAQGLDVVIGVVETHGRKETAALLDGLTILPPKRHSHRGRQIREFALDAALARR
+ PALILMDELAHSNAPGSRHPKRWQDIEELLEAGIDVFTTVNVQHLESLNDVVSGVTGI
+ QVRETVPDPFFDAADEVVLVDLPPDDLRQRLNEGKVYIAGQAERAIEHFFRKGNLIAL
+ RELALRRTADRVDDQMRAWRAHPGEEKVWHTRDAILLCIGHNTGSEKLVRTAARLASR
+ LGSVWHAVYVETPTLHRLPEKQRRAILSALRLAQELGAETATLSDPAEEKAVVRYARE
+ HNLGKIVMGRPASRRWWRRDAFADRLARRAPDLDQVIVALEEPPARALTQAPDNRSFK
+ EKWRGQIQGCLVAVALCAITTLIAMQWLVAFDAANLVMLYLLGVVVIALFYGRWPSVV
+ ATVINVASFDLFFIAPRGTLAVSDVQYLLTFAVMLTVGLVIGNLTAGVRYQARVARYR
+ EQRTRHLYEMSKALAVGRSEHDIAVTSEQFIASTFQARSQILLPDAHGKLLPLTHQQG
+ MTPWDDAIARWSFDKGQPAGAGTDTLPGVPYQILPLKSADKTHGLAIVEPGNLRQLMV
+ PEQQRLLETFTLLVANALERLTLTASEEQARLASERESIRNALLAALSHDLRTPLTVL
+ FGQAEILTLDLASAGSPHARQASEIRQHILNTTRLVNNLLDMARIQSGGFNLKKEWLT
+ LEEVVGSALQMLEPGLLHPITLSLPQQLTLIHVDGLLFERVLINLLENAVKYAGPQAS
+ IGIDAAVKDDRLQLDVWDNGPGIPAGQEQTIFDKFARGNKESAVPGVGLGLAICHAIV
+ EVHGGTLTAYNRSQGGACFRVTLPQGKPPELDDFHEDM"
+ misc_feature 2169353..2172034
+ /locus_tag="SARI_02238"
+ /note="sensor protein KdpD; Provisional; Region: PRK10490"
+ /db_xref="CDD:236701"
+ misc_feature 2169410..2170042
+ /locus_tag="SARI_02238"
+ /note="Osmosensitive K+ channel His kinase sensor domain;
+ Region: KdpD; pfam02702"
+ /db_xref="CDD:145711"
+ misc_feature 2170109..>2170390
+ /locus_tag="SARI_02238"
+ /note="USP domain is located between the N-terminal sensor
+ domain and C-terminal catalytic domain of this
+ Osmosensitive K+ channel histidine kinase family. The
+ family of KdpD sensor kinase proteins regulates the
+ kdpFABC operon responsible for potassium...; Region:
+ USP_OKCHK; cd01987"
+ /db_xref="CDD:238945"
+ misc_feature order(2170118..2170126,2170208..2170210,2170376..2170381,
+ 2170385..2170390)
+ /locus_tag="SARI_02238"
+ /note="Ligand Binding Site [chemical binding]; other site"
+ /db_xref="CDD:238945"
+ misc_feature 2170559..2170855
+ /locus_tag="SARI_02238"
+ /note="Domain of unknown function (DUF4118); Region:
+ DUF4118; pfam13493"
+ /db_xref="CDD:222175"
+ misc_feature 2170961..2171284
+ /locus_tag="SARI_02238"
+ /note="GAF domain; Region: GAF_3; pfam13492"
+ /db_xref="CDD:222174"
+ misc_feature 2171333..2171530
+ /locus_tag="SARI_02238"
+ /note="Histidine Kinase A (dimerization/phosphoacceptor)
+ domain; Histidine Kinase A dimers are formed through
+ parallel association of 2 domains creating 4-helix
+ bundles; usually these domains contain a conserved His
+ residue and are activated via...; Region: HisKA; cd00082"
+ /db_xref="CDD:119399"
+ misc_feature order(2171351..2171353,2171363..2171365,2171375..2171377,
+ 2171384..2171386,2171396..2171398,2171405..2171407,
+ 2171459..2171461,2171471..2171473,2171480..2171482,
+ 2171492..2171494,2171501..2171503,2171513..2171515)
+ /locus_tag="SARI_02238"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119399"
+ misc_feature 2171369..2171371
+ /locus_tag="SARI_02238"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:119399"
+ misc_feature 2171684..2171989
+ /locus_tag="SARI_02238"
+ /note="Histidine kinase-like ATPases; This family includes
+ several ATP-binding proteins for example: histidine
+ kinase, DNA gyrase B, topoisomerases, heat shock protein
+ HSP90, phytochrome-like ATPases and DNA mismatch repair
+ proteins; Region: HATPase_c; cd00075"
+ /db_xref="CDD:238030"
+ misc_feature order(2171702..2171704,2171714..2171716,2171723..2171725,
+ 2171792..2171794,2171798..2171800,2171804..2171806,
+ 2171810..2171815,2171888..2171899,2171945..2171947,
+ 2171951..2171953,2171966..2171971,2171975..2171977)
+ /locus_tag="SARI_02238"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature 2171714..2171716
+ /locus_tag="SARI_02238"
+ /note="Mg2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature order(2171804..2171806,2171810..2171812,2171888..2171890,
+ 2171894..2171896)
+ /locus_tag="SARI_02238"
+ /note="G-X-G motif; other site"
+ /db_xref="CDD:238030"
+ gene 2172034..2172711
+ /locus_tag="SARI_02239"
+ CDS 2172034..2172711
+ /locus_tag="SARI_02239"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:BlastProDom:IPR001867"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR001789"
+ /inference="protein motif:HMMPfam:IPR001867"
+ /inference="protein motif:HMMSmart:IPR001789"
+ /inference="protein motif:superfamily:IPR011006"
+ /inference="similar to AA sequence:REFSEQ:YP_215709.1"
+ /note="response regulator in two-component regulatory
+ system with KdpD; regulates the kdp operon involved in
+ potassium transport"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional activator KdpE"
+ /protein_id="YP_001571253.1"
+ /db_xref="GI:161504141"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR001867"
+ /db_xref="InterPro:IPR011006"
+ /db_xref="InterPro:IPR011991"
+ /translation="MTNVLIVEDEQAIRRFLRAALEGDGLRVYEAETLQRGLLEAATR
+ KPDLIILDLGLPDGDGNDFIRDLRQWSAIPIIVLSARSEENDKIAALDAGADDYLSKP
+ FGIGELQARLRVALRRHAASPCADPRVRFSNVTVDLAARLIHRGDEEIHLTPIEFRLL
+ AVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQDPTRPRHFITETG
+ IGYRFMP"
+ misc_feature 2172034..2172708
+ /locus_tag="SARI_02239"
+ /note="DNA-binding transcriptional activator KdpE;
+ Provisional; Region: PRK10529"
+ /db_xref="CDD:182522"
+ misc_feature 2172046..2172354
+ /locus_tag="SARI_02239"
+ /note="Signal receiver domain; originally thought to be
+ unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
+ recently identified in eukaroytes ETR1 Arabidopsis
+ thaliana; this domain receives the signal from the sensor
+ partner in a two-component systems; Region: REC; cd00156"
+ /db_xref="CDD:238088"
+ misc_feature order(2172055..2172060,2172187..2172189,2172211..2172213,
+ 2172268..2172270,2172325..2172327,2172334..2172339)
+ /locus_tag="SARI_02239"
+ /note="active site"
+ /db_xref="CDD:238088"
+ misc_feature 2172187..2172189
+ /locus_tag="SARI_02239"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238088"
+ misc_feature order(2172196..2172201,2172205..2172213)
+ /locus_tag="SARI_02239"
+ /note="intermolecular recognition site; other site"
+ /db_xref="CDD:238088"
+ misc_feature 2172334..2172342
+ /locus_tag="SARI_02239"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238088"
+ misc_feature 2172418..2172702
+ /locus_tag="SARI_02239"
+ /note="Effector domain of response regulator. Bacteria and
+ certain eukaryotes like protozoa and higher plants use
+ two-component signal transduction systems to detect and
+ respond to changes in the environment. The system consists
+ of a sensor histidine kinase and...; Region: trans_reg_C;
+ cd00383"
+ /db_xref="CDD:238225"
+ misc_feature order(2172490..2172492,2172547..2172552,2172604..2172606,
+ 2172613..2172615,2172637..2172642,2172676..2172678,
+ 2172691..2172693)
+ /locus_tag="SARI_02239"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:238225"
+ gene 2173470..2175668
+ /locus_tag="SARI_02240"
+ CDS 2173470..2175668
+ /locus_tag="SARI_02240"
+ /inference="protein motif:HMMPfam:IPR000310"
+ /inference="protein motif:HMMPfam:IPR005308"
+ /inference="protein motif:HMMPfam:IPR008286"
+ /inference="protein motif:HMMPIR:IPR011193"
+ /inference="protein motif:ScanRegExp:IPR000310"
+ /inference="protein motif:superfamily:IPR008286"
+ /inference="protein motif:superfamily:IPR011006"
+ /note="'KEGG: stm:STM0701 0. speF; orniTHIne decarboxylase
+ isozyme K01581;
+ COG: COG1982 Arginine/lysine/orniTHIne decarboxylases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="ornithine decarboxylase"
+ /protein_id="YP_001571254.1"
+ /db_xref="GI:161504142"
+ /db_xref="InterPro:IPR000310"
+ /db_xref="InterPro:IPR005308"
+ /db_xref="InterPro:IPR008286"
+ /db_xref="InterPro:IPR011006"
+ /db_xref="InterPro:IPR011193"
+ /translation="MTELKIAVSRHCPDCFSTQRNIVNVDESRFIDVAAIVLSIDDIE
+ RGKLDEIDATGYGIPVFIATHDEGRVPPEYLSRISGVFEYNESRTAFYGRQLETAASH
+ YETQLRPPFFRALVDYVNQGNSAFDCPGHQGGEFFRRHPAGNQFVEYFGETLFRSDLC
+ NADVAMGDLLIHEGAPCIAQQHAAKIFNADKTYFVLNGTSSSNKVVLNALLTPGDLVL
+ FDRNNHKSNHHGALLQAGATPVYLETARNPYGFIGGIDAHCFEEDYLRELINEVAPQR
+ LRDVRPFRLAVIQLGTYDGTIYNARQVVDKIGHLCDYILFDSAWVGYEQFIPMMADCS
+ PLLLELNENDPGILVTQSVHKQQAGFSQTSQIHKKDSHIKGQPRYVPHKRMNNAFMMH
+ ASTSPFYPLFAALDVNAKMHEGVSGRNMWMDCVVNGVDTRKLILENCHHIRPFVPELI
+ DGKPWQSYPTSEIACDLRFFHFVPGEHWHAFEGYAEHQYFVDPCKLLLTTPGINAASG
+ EYEDFGVPATILANFLRENGVVPEKCDLNSILFLLTPAEDMAKLQQLVALLVRFEKLL
+ EADAPLAEVLPSIYKQHETRYAGYTLRQLCQEMHDLYARHNVKQLQKEMFRKSHFPKV
+ SMNPQEANYAYLRGEVELVRLPEAEGRIAAEGALPYPPGVLCVVPGEIWGGSVLRYFS
+ ALEEGINLLPGFAPELQGVYIEEHDGRKQVWCYVIKPRDAQRSLLQEEKL"
+ misc_feature 2173470..2175626
+ /locus_tag="SARI_02240"
+ /note="ornithine decarboxylase; Provisional; Region:
+ PRK13578"
+ /db_xref="CDD:237434"
+ misc_feature 2173479..2173778
+ /locus_tag="SARI_02240"
+ /note="Orn/Lys/Arg decarboxylase, N-terminal domain;
+ Region: OKR_DC_1_N; pfam03709"
+ /db_xref="CDD:217683"
+ misc_feature 2173797..2174780
+ /locus_tag="SARI_02240"
+ /note="Ornithine decarboxylase family. This family belongs
+ to pyridoxal phosphate (PLP)-dependent aspartate
+ aminotransferase superfamily (fold I). The major groups in
+ this CD corresponds to ornithine decarboxylase (ODC),
+ arginine decarboxylase (ADC) and lysine...; Region:
+ Orn_deC_like; cd00615"
+ /db_xref="CDD:99739"
+ misc_feature order(2173941..2173943,2173956..2173958,2173980..2173982,
+ 2174055..2174063,2174067..2174072,2174079..2174081,
+ 2174091..2174099,2174103..2174108,2174139..2174144,
+ 2174529..2174534,2174541..2174555,2174628..2174633,
+ 2174637..2174645,2174649..2174651,2174670..2174672,
+ 2174679..2174681,2174688..2174690,2174727..2174732)
+ /locus_tag="SARI_02240"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99739"
+ misc_feature order(2174061..2174069,2174139..2174141,2174145..2174147,
+ 2174334..2174336,2174418..2174420,2174424..2174429,
+ 2174523..2174525,2174529..2174534)
+ /locus_tag="SARI_02240"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:99739"
+ misc_feature 2174532..2174534
+ /locus_tag="SARI_02240"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:99739"
+ misc_feature 2175195..2175596
+ /locus_tag="SARI_02240"
+ /note="Orn/Lys/Arg decarboxylase, C-terminal domain;
+ Region: OKR_DC_1_C; pfam03711"
+ /db_xref="CDD:112521"
+ gene 2175665..2176984
+ /gene="potE"
+ /locus_tag="SARI_02241"
+ CDS 2175665..2176984
+ /gene="potE"
+ /locus_tag="SARI_02241"
+ /inference="protein motif:HMMPanther:IPR002293"
+ /inference="protein motif:HMMPfam:IPR004841"
+ /inference="protein motif:HMMTigr:IPR004754"
+ /inference="similar to AA sequence:REFSEQ:NP_805925.1"
+ /note="'catalyzes the uptake of putrescine via a proton
+ symport mechanism, as well as the efflux of putrescine by
+ a putrescine/ornithine antiport system'"
+ /codon_start=1
+ /transl_table=11
+ /product="putrescine transporter"
+ /protein_id="YP_001571255.1"
+ /db_xref="GI:161504143"
+ /db_xref="InterPro:IPR002293"
+ /db_xref="InterPro:IPR004754"
+ /db_xref="InterPro:IPR004841"
+ /translation="MSKPKANKMGVVQLTILTMVNMMGSGIIMLPTKLSEVGTISIIS
+ WLVTAVGSMALAWAFAKCGMFSRKSGGMGGYAEYAFGKSGNFMANYTYGVSLLIANVA
+ IAISAVGYGTELFGAALTPLQIGLATIAVLWVCTIANFGGARITGQISSVTVWGVIIP
+ VVGLCIIGWFWFSPSMYVASWNPHHVPFFSAVGSSIAMTLWAFLGLESACANADVVEN
+ PEKNVPIAVLGGTLGAAVIYIVSTNVIAGIVPNMDLANSTAPFGLAFAQMFTPAVGKV
+ IMALMVMSCCGSLLGWQFTIAQVFKSSADEGYFPKVFSRVTKVDAPVQGMLIIVIIQT
+ GLSLMTISPSLNSQFNVLVNLAVVTNIIPYILSMAALVIIQKMANVPSSKAKVANFVA
+ FVGAMYSFYALYSSGEEAMLYGSIVTFLGWTLYGLVSPRFELKNKHG"
+ misc_feature 2175668..2176981
+ /gene="potE"
+ /locus_tag="SARI_02241"
+ /note="putrescine transporter; Provisional; Region: potE;
+ PRK10655"
+ /db_xref="CDD:182622"
+ gene 2177048..2177533
+ /locus_tag="SARI_02242"
+ CDS 2177048..2177533
+ /locus_tag="SARI_02242"
+ /inference="protein motif:HMMPfam:IPR011576"
+ /inference="protein motif:superfamily:IPR009002"
+ /inference="similar to AA sequence:INSD:AAL19643.1"
+ /note="'COG: COG3467 Predicted flavin-nucleotide-binding
+ protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571256.1"
+ /db_xref="GI:161504144"
+ /db_xref="InterPro:IPR009002"
+ /db_xref="InterPro:IPR011576"
+ /translation="MSNPEREVTDIAEILAIISKHEVCRIGVNDNFCPYVVPVNFGYE
+ YQNGRWIFYFHGARTGKKMRLLRKNPAVCVEIDGDHGLLRADDPCDYSYAYTSVFATG
+ LASILRTREETRYGLDVIMRQTDPGKTFSYREDMMKAVCVVRIECDALTCRRHLATQS
+ E"
+ misc_feature 2177048..2177527
+ /locus_tag="SARI_02242"
+ /note="Predicted flavin-nucleotide-binding protein
+ [General function prediction only]; Region: COG3467"
+ /db_xref="CDD:225998"
+ gene complement(2177648..2179288)
+ /locus_tag="SARI_02243"
+ CDS complement(2177648..2179288)
+ /locus_tag="SARI_02243"
+ /inference="protein motif:HMMPfam:IPR005843"
+ /inference="protein motif:HMMPfam:IPR005844"
+ /inference="protein motif:HMMPfam:IPR005845"
+ /inference="protein motif:HMMPfam:IPR005846"
+ /inference="protein motif:HMMTigr:IPR005852"
+ /inference="protein motif:ScanRegExp:IPR005841"
+ /inference="similar to AA sequence:REFSEQ:NP_805927.1"
+ /note="catalyzes the interconversion of alpha-D-glucose
+ 1-phosphate to alpha-D-glucose 6-phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphoglucomutase"
+ /protein_id="YP_001571257.1"
+ /db_xref="GI:161504145"
+ /db_xref="InterPro:IPR005841"
+ /db_xref="InterPro:IPR005843"
+ /db_xref="InterPro:IPR005844"
+ /db_xref="InterPro:IPR005845"
+ /db_xref="InterPro:IPR005846"
+ /db_xref="InterPro:IPR005852"
+ /translation="MAIHNRAGQPAQQSDLINVAQLTAQYYVLKPEAGNAEHAVKFGT
+ SGHRGSAGRHSFNEPHILAVAQAIAEERAKNGITGPCYVGKDTHALSEPAFISVLEVL
+ AANGVDVIVQENNGFTPTPAVSNAILVHNKKGGPLADGIVITPSHNPPEDGGIKYNPP
+ NGGPADTNVTKVVEERANTLLADGLKGVKRISLDAAMASGHVKAVDLVQPFVEGLADI
+ VDMAAIQKAGLTLGVDPLGGSGIEYWKRIAEHYKLNLTLVNDQVDQTFRFMHLDKDGA
+ IRMDCSSECAMAGLLALRDKFDLAFANDPDYDRHGIVTPAGLMNPNHYLAVAINYLFQ
+ HRPQWGNEVAVGKTLVSSAMIDRVVNDLGRKLVEVPVGFKWFVDGLFDGSFGFGGEES
+ AGASFLRFDGTPWSTDKDGIIMCLLAAEITAVTGKNPQEHYNELAARFGAPSYNRLQA
+ AATSAQKAALSKLSPEMVSASTLAGDPITARLTAAPGNGASIGGLKVMTDNGWFAARP
+ SGTEDAYKIYCESFLGEEHRKQIEKEAVEIVSEVLKNA"
+ misc_feature complement(2177657..2179288)
+ /locus_tag="SARI_02243"
+ /note="phosphoglucomutase, alpha-D-glucose
+ phosphate-specific; Region: pgm; TIGR01132"
+ /db_xref="CDD:188111"
+ misc_feature complement(2177672..2179231)
+ /locus_tag="SARI_02243"
+ /note="This bacterial PGM-like (phosphoglucomutase-like)
+ protein of unknown function belongs to the
+ alpha-D-phosphohexomutase superfamily. The
+ alpha-D-phosphohexomutases include several related enzymes
+ that catalyze a reversible intramolecular phosphoryl...;
+ Region: PGM_like3; cd05801"
+ /db_xref="CDD:100094"
+ misc_feature complement(order(2177741..2177743,2177756..2177764,
+ 2177768..2177770,2178107..2178109,2178113..2178115,
+ 2178119..2178121,2178170..2178178,2178239..2178241,
+ 2178362..2178367,2178371..2178373,2178377..2178379,
+ 2178821..2178823,2178845..2178853,2179145..2179147,
+ 2179154..2179156,2179160..2179162))
+ /locus_tag="SARI_02243"
+ /note="active site"
+ /db_xref="CDD:100094"
+ misc_feature complement(order(2177741..2177743,2177756..2177764,
+ 2177768..2177770,2178107..2178109,2178113..2178115,
+ 2178119..2178121,2178170..2178172,2178176..2178178,
+ 2178239..2178241,2178362..2178364,2178851..2178853,
+ 2179154..2179156))
+ /locus_tag="SARI_02243"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:100094"
+ misc_feature complement(order(2178365..2178367,2178371..2178373,
+ 2178377..2178379,2178851..2178853))
+ /locus_tag="SARI_02243"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:100094"
+ gene complement(2179313..2179855)
+ /locus_tag="SARI_02244"
+ CDS complement(2179313..2179855)
+ /locus_tag="SARI_02244"
+ /inference="protein motif:BlastProDom:IPR005621"
+ /inference="protein motif:HMMPfam:IPR005621"
+ /inference="similar to AA sequence:INSD:AAO69788.1"
+ /note="negative modulator of the initiation of chromosome
+ replication"
+ /codon_start=1
+ /transl_table=11
+ /product="replication initiation regulator SeqA"
+ /protein_id="YP_001571258.1"
+ /db_xref="GI:161504146"
+ /db_xref="InterPro:IPR005621"
+ /translation="MKTIEVDDELYSYIASHTKHIGESASDILRRMLKFSATTQPIAS
+ AAKGTPSAQLIAEVKPVNPVKDKVRAMRELLLSDEYAEQKKAVNRFMLILTTLYSLDH
+ HAFAEATESLHGRTRVYFAPDEQTLLKNGNQTKPKHVPGTPYWVITNTNTGRKCSMIE
+ HIMQSMQFPAELIEKVCGTI"
+ misc_feature complement(2179316..2179855)
+ /locus_tag="SARI_02244"
+ /note="replication initiation regulator SeqA; Provisional;
+ Region: PRK11187"
+ /db_xref="CDD:236874"
+ unsure 2179982..2180394
+ /note="Sequence derived from one plasmid subclone"
+ gene 2180040..2180810
+ /locus_tag="SARI_02246"
+ CDS 2180040..2180810
+ /locus_tag="SARI_02246"
+ /inference="protein motif:HMMPfam:IPR000073"
+ /inference="similar to AA sequence:REFSEQ:NP_459681.1"
+ /note="'KEGG: stm:STM0696 2.0e-101 ybfF; putative enzyme;
+ COG: COG0596 Predicted hydrolases or acyltransferases
+ (alpha/beta hydrolase superfamily);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571260.2"
+ /db_xref="GI:448236254"
+ /db_xref="InterPro:IPR000073"
+ /translation="MKLNIRAQSAQNLHNNSPIVLVHGLFGSLDNLGVLARDLVTDHD
+ IIQVDMRNHGLSPRDPVMDYPAMAQDLLDTLDARQIEKATFIGHSMGGKAVMALTALA
+ PDRIDRLVAIDIAPVDYHVRRHDRIFAAINAVSESDATSRQQAASIMRQHLNEEGVIQ
+ FLLKSWVEGEWRFNVPVLWDQYPYIVGWETIPPWEHPALFIPGGNSPYVTEAYRDELL
+ AQFPLARAHVIAGAGHWVHAEKPEAVLRAIRRYLHDKR"
+ misc_feature 2180040..2180804
+ /locus_tag="SARI_02246"
+ /note="acyl-CoA esterase; Provisional; Region: PRK10673"
+ /db_xref="CDD:182637"
+ misc_feature 2180091..>2180441
+ /locus_tag="SARI_02246"
+ /note="PGAP1-like protein; Region: PGAP1; pfam07819"
+ /db_xref="CDD:203773"
+ gene 2180944..2181231
+ /locus_tag="SARI_02247"
+ CDS 2180944..2181231
+ /locus_tag="SARI_02247"
+ /inference="protein motif:HMMPfam:IPR002145"
+ /inference="protein motif:superfamily:IPR010985"
+ /inference="similar to AA sequence:INSD:AAL19639.1"
+ /note="'COG: NOG13544 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="LexA regulated protein"
+ /protein_id="YP_001571261.1"
+ /db_xref="GI:161504149"
+ /db_xref="InterPro:IPR002145"
+ /db_xref="InterPro:IPR010985"
+ /translation="MAKEQTDRTTLDLFAHERRPGRPKTNPLSRDEQLRINKRNQLKR
+ DKVRGLKRVELKLNAQAVDALNELAEARNISRSELIEEILMKQLMALRGQV"
+ misc_feature 2180944..2181213
+ /locus_tag="SARI_02247"
+ /note="LexA regulated protein; Provisional; Region:
+ PRK11675"
+ /db_xref="CDD:183272"
+ gene 2181387..2181917
+ /locus_tag="SARI_02248"
+ CDS 2181387..2181917
+ /locus_tag="SARI_02248"
+ /inference="protein motif:HMMPfam:IPR008254"
+ /inference="protein motif:HMMTigr:IPR010086"
+ /inference="protein motif:ScanRegExp:IPR001226"
+ /inference="similar to AA sequence:REFSEQ:NP_459679.1"
+ /note="'An electron-transfer protein; flavodoxin binds one
+ FMN molecule, which serves as a redox-active prosthetic
+ group'"
+ /codon_start=1
+ /transl_table=11
+ /product="flavodoxin FldA"
+ /protein_id="YP_001571262.1"
+ /db_xref="GI:161504150"
+ /db_xref="InterPro:IPR001226"
+ /db_xref="InterPro:IPR008254"
+ /db_xref="InterPro:IPR010086"
+ /translation="MAITGIFFGSDTGNTENIAKMIQKQLGKDVADVHDIAKSSKEDL
+ EGYDILLLGIPTWYYGEAQCDWDDFFPTLEEIDFNGKLVALFGCGDQEDYAEYFCDAL
+ GTIRDIIEPRGATIVGHWPTAGYHFEASKGLADDDHFVGLAIDEDRQPELTAERVEKW
+ VKQISAELHLDDILNA"
+ misc_feature 2181387..2181896
+ /locus_tag="SARI_02248"
+ /note="flavodoxin FldA; Validated; Region: PRK09267"
+ /db_xref="CDD:236439"
+ gene 2182199..2182651
+ /gene="fur"
+ /locus_tag="SARI_02249"
+ CDS 2182199..2182651
+ /gene="fur"
+ /locus_tag="SARI_02249"
+ /inference="protein motif:BlastProDom:IPR002481"
+ /inference="protein motif:HMMPfam:IPR002481"
+ /inference="similar to AA sequence:INSD:CAD05156.1"
+ /note="negatively regulates a number of operons that
+ encode enzymes involved in iron transport; activated by
+ manganese; forms a homodimer"
+ /codon_start=1
+ /transl_table=11
+ /product="ferric uptake regulator"
+ /protein_id="YP_001571263.1"
+ /db_xref="GI:161504151"
+ /db_xref="InterPro:IPR002481"
+ /translation="MTDNNTALKKAGLKVTLPRLKILEVLQEPDNHHVSAEDLYKRLI
+ DMGEEIGLATVYRVLNQFDDAGIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEF
+ SDDSIEARQREIAARHGIRLTNHSLYLYGHCAEGDCREDEQAHDDATK"
+ misc_feature 2182199..2182636
+ /gene="fur"
+ /locus_tag="SARI_02249"
+ /note="ferric uptake regulator; Provisional; Region: fur;
+ PRK09462"
+ /db_xref="CDD:236527"
+ misc_feature 2182250..2182597
+ /gene="fur"
+ /locus_tag="SARI_02249"
+ /note="Ferric uptake regulator(Fur) and related
+ metalloregulatory proteins; typically iron-dependent,
+ DNA-binding repressors and activators; Region: Fur_like;
+ cd07153"
+ /db_xref="CDD:133478"
+ misc_feature order(2182295..2182297,2182439..2182441,2182460..2182462,
+ 2182466..2182468,2182499..2182501)
+ /gene="fur"
+ /locus_tag="SARI_02249"
+ /note="metal binding site 2 [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:133478"
+ misc_feature 2182349..2182393
+ /gene="fur"
+ /locus_tag="SARI_02249"
+ /note="putative DNA binding helix; other site"
+ /db_xref="CDD:133478"
+ misc_feature order(2182457..2182459,2182463..2182465,2182520..2182522,
+ 2182571..2182573)
+ /gene="fur"
+ /locus_tag="SARI_02249"
+ /note="metal binding site 1 [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:133478"
+ misc_feature order(2182472..2182480,2182526..2182531,2182556..2182564,
+ 2182568..2182594)
+ /gene="fur"
+ /locus_tag="SARI_02249"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:133478"
+ misc_feature order(2182475..2182477,2182484..2182486,2182595..2182597)
+ /gene="fur"
+ /locus_tag="SARI_02249"
+ /note="structural Zn2+ binding site [ion binding]; other
+ site"
+ /db_xref="CDD:133478"
+ gene 2182767..2183140
+ /locus_tag="SARI_02250"
+ /note="Pseudogene compared to gi|16764062|ref|NP_459677.1|
+ putative transcriptional regulator [Salmonella typhimurium
+ LT2]"
+ gene 2183252..2183917
+ /locus_tag="SARI_02251"
+ CDS 2183252..2183917
+ /locus_tag="SARI_02251"
+ /inference="similar to AA sequence:SwissProt:P37463"
+ /note="'KEGG: afu:AF0661 0.00018 heterodisulfide
+ reductase, subunit E, putative K03390;
+ COG: NOG06514 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571264.1"
+ /db_xref="GI:161504152"
+ /translation="MFGSVFVLAIGLLMAGVIRFWRKISPGIPHSAEIAEASRNAFTL
+ KYLNGGHGKGCNEADDAFTLLRRRFHHFTFYGFMLCFAATLVATGYHYVADWEAPYPF
+ FSLPVMLGTLGGIGLLIGPAGLLWLNLWRSPLHGDARQKPMDRGFILLLLLTSLTGLA
+ LLAGRDTSGMGILLALHLGVVMALFLTLPYGKFAHGFFRCAALLKWAVEKRRGKHAGD
+ TGN"
+ misc_feature <2183252..2183914
+ /locus_tag="SARI_02251"
+ /note="tricarballylate utilization protein B; Provisional;
+ Region: PRK15033"
+ /db_xref="CDD:237885"
+ gene 2184062..2185273
+ /locus_tag="SARI_02252"
+ CDS 2184062..2185273
+ /locus_tag="SARI_02252"
+ /inference="protein motif:HMMPfam:IPR005828"
+ /inference="protein motif:HMMTigr:IPR004736"
+ /inference="protein motif:ScanRegExp:IPR005829"
+ /inference="similar to AA sequence:INSD:AAX64616.1"
+ /note="'KEGG: cal:orf19.4384 0.00011 HXT10; fructose
+ symporter K01804;
+ COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="citrate-proton symporter"
+ /protein_id="YP_001571265.1"
+ /db_xref="GI:161504153"
+ /db_xref="InterPro:IPR004736"
+ /db_xref="InterPro:IPR005828"
+ /db_xref="InterPro:IPR005829"
+ /translation="MFGFYATYIIARTFFPAESEFASLMLTFAVFGPGFLMRPVGAIV
+ PGVYIDRIGRRKGLMVTLAIMGCGTLLIALVPGYQTIGLAAPALVLLGRLLQGFSAGV
+ ESGGVSVYLSEIATPGNKGFYTSWQSASQQVAIVVAALIGYSLNITLGHDTISEWGWR
+ IPFFIGCMIIPLIFILRRSLQETEAFLQRKYRPDTREIFATIAKNWRIITAGTLLVAM
+ TTTTLYFITVYTPTYGRTVLNLSARDSLIVTMLVGVSNFIWLPIGGAISDRIDRRAVL
+ MGITLLALITTRPVMQWLTAAPDFTRMAQVLLWFSFFFGMYNGAMVAALTEVMPVYVR
+ TVGFSLAFSLATAIFGGLTPAISTTLVKLTGDKSSPGWWLMCAALCGLAATAMLFVRL
+ SRGYIAAENKA"
+ misc_feature 2184062..2185270
+ /locus_tag="SARI_02252"
+ /note="citrate-proton symporter; Provisional; Region:
+ PRK15075"
+ /db_xref="CDD:237902"
+ misc_feature 2184164..2185234
+ /locus_tag="SARI_02252"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature order(2184164..2184166,2184173..2184175,2184185..2184190,
+ 2184194..2184199,2184359..2184364,2184371..2184376,
+ 2184383..2184388,2184395..2184397,2184431..2184436,
+ 2184443..2184448,2184464..2184466,2184719..2184721,
+ 2184728..2184733,2184740..2184745,2184752..2184754,
+ 2184794..2184796,2184806..2184808,2184818..2184820,
+ 2184827..2184829,2184839..2184841,2185004..2185006,
+ 2185013..2185018,2185025..2185027,2185037..2185042,
+ 2185049..2185051,2185082..2185087,2185094..2185099,
+ 2185106..2185111,2185118..2185120)
+ /locus_tag="SARI_02252"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene complement(2185321..2185653)
+ /locus_tag="SARI_02253"
+ CDS complement(2185321..2185653)
+ /locus_tag="SARI_02253"
+ /inference="similar to AA sequence:REFSEQ:YP_151267.1"
+ /note="'COG: NOG11319 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative lipoprotein"
+ /protein_id="YP_001571266.1"
+ /db_xref="GI:161504154"
+ /translation="MKKILLIASMTAGLTACASSPAPEEDSRLKEAYSACINTAQGSP
+ EKIEACQSVLNVLKKDRKHQQFANEESVRVLDYQQCIQATRTGNDQAVKADCDKVWQE
+ IRSHNSAQ"
+ misc_feature complement(2185597..2185653)
+ /locus_tag="SARI_02253"
+ /note="Prokaryotic membrane lipoprotein lipid attachment
+ site; Region: LPAM_1; pfam08139"
+ /db_xref="CDD:149279"
+ misc_feature complement(2185333..2185596)
+ /locus_tag="SARI_02253"
+ /note="YbfN-like lipoprotein; Region: YbfN; pfam13982"
+ /db_xref="CDD:206152"
+ gene complement(2185703..2187109)
+ /locus_tag="SARI_02254"
+ CDS complement(2185703..2187109)
+ /locus_tag="SARI_02254"
+ /inference="protein motif:HMMPfam:IPR005318"
+ /inference="similar to AA sequence:REFSEQ:NP_455248.1"
+ /note="'KEGG: psp:PSPPH_3782 3.2e-12 porin D;
+ COG: NOG06287 non supervised orthologous group;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571267.1"
+ /db_xref="GI:161504155"
+ /db_xref="InterPro:IPR005318"
+ /translation="MRTFSGKRSTLALAIAGITAMSGWIVVPQAQASGFFDDSTLTGG
+ IYYWQRERDRKDVTDGDKYKTNLSHATWNANLDFQSGYAADMFGLDIAAFTAIEMAEN
+ GDSGHPNEIAFSKKNKGYDEDYSGDKSGISLYKAAAKFKYGPVWARAGYIQPTGQTLL
+ APHWSFMPGTYQGAEAGASFDYGDAGALSFSYMWTNEYKAPWHTEMDKFYQADKKTNV
+ DYLHSIGAKYDFKNDLVLEAAFGQSEGYVDQYFAKASYKFDLGGNPFTTSYQFYGARD
+ KVDDRSVNDIYDGTAWLQALTFGYKVAEVVDLRLEGTWVKADGQQGYFLQRMTPTYAS
+ SNGRLDIWWDNRSDFNANGEKAVFFGAMYDLKNWDLPGWAVGASYVYAWDAKPATWQS
+ NPDAYYDKNRTIEESSYSLDAVYTLQEGRAKGTMFKLHFTEYDNHSNIPSWGGGYGNI
+ FQDERDVKFIVIAPFTIF"
+ misc_feature complement(2185823..2187013)
+ /locus_tag="SARI_02254"
+ /note="outer membrane porin, OprD family; Region: OprD;
+ pfam03573"
+ /db_xref="CDD:217621"
+ gene complement(2187552..2189219)
+ /locus_tag="SARI_02255"
+ CDS complement(2187552..2189219)
+ /locus_tag="SARI_02255"
+ /inference="protein motif:HMMPanther:IPR000924"
+ /inference="protein motif:HMMPfam:IPR000924"
+ /inference="protein motif:HMMTigr:IPR004514"
+ /inference="protein motif:ScanRegExp:IPR001412"
+ /inference="protein motif:superfamily:IPR011035"
+ /note="'catalyzes a two-step reaction, first charging a
+ glutamine molecule by linking its carboxyl group to the
+ alpha-phosphate of ATP, followed by transfer of the
+ aminoacyl-adenylate to its tRNA'"
+ /codon_start=1
+ /transl_table=11
+ /product="glutaminyl-tRNA synthetase"
+ /protein_id="YP_001571268.1"
+ /db_xref="GI:161504156"
+ /db_xref="InterPro:IPR000924"
+ /db_xref="InterPro:IPR001412"
+ /db_xref="InterPro:IPR004514"
+ /db_xref="InterPro:IPR011035"
+ /translation="MSEAEARPTNFIRQIIDEDLASGKHTTVHTRFPPEPNGYLHIGH
+ AKSICLNFGIAQDYQGQCNLRFDDTNPVKEDIEYVDSIKNDVEWLGFHWSGDIRYSSD
+ YFDQLHAYAVELINKGLAYVDELTPEQIREYRGTLTAPGKNSPFRDRSVEENLALFEK
+ MRTGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGTKWCIYPMYDFTHCI
+ SDALEGITHSLCTLEFQDNRRLYDWVLDNITIPVHPRQYEFSRLNLEYTVMSKRKLNL
+ LVTDNHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCIRE
+ DLNENAPRAMAVIDPVKLVIENYPQGESEMVTMPNHPNKLEMGSREVPFSGEIWIDRA
+ DFREEANKQYKRLVMGKEVRLRNAYVIKAERVEKDAEGNITTIFCTYDADTLSKDPAD
+ GRKVKGVIHWVSAAHALPIEIRLYDRLFSVPNPGAAEDFLSVINTESLVIKQGYGEPS
+ LKAAVAGKAFQFEREGYFCLDSRYATADKLVFNRTVGLRDTWAKAGE"
+ misc_feature complement(2187561..2189219)
+ /locus_tag="SARI_02255"
+ /note="glutaminyl-tRNA synthetase; Provisional; Region:
+ PRK05347"
+ /db_xref="CDD:235424"
+ misc_feature complement(<2188854..2189141)
+ /locus_tag="SARI_02255"
+ /note="nucleotidyl transferase superfamily; Region:
+ nt_trans; cl00015"
+ /db_xref="CDD:241550"
+ misc_feature complement(2189088..2189099)
+ /locus_tag="SARI_02255"
+ /note="active site"
+ /db_xref="CDD:173912"
+ misc_feature complement(2189088..2189099)
+ /locus_tag="SARI_02255"
+ /note="HIGH motif; other site"
+ /db_xref="CDD:173912"
+ misc_feature complement(order(2189088..2189090,2189097..2189099))
+ /locus_tag="SARI_02255"
+ /note="nucleotide binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:173912"
+ misc_feature complement(2188194..>2188625)
+ /locus_tag="SARI_02255"
+ /note="catalytic core domain of glutaminyl-tRNA
+ synthetase; Region: GlnRS_core; cd00807"
+ /db_xref="CDD:185676"
+ misc_feature complement(2188404..2188418)
+ /locus_tag="SARI_02255"
+ /note="KMSKS motif; other site"
+ /db_xref="CDD:185676"
+ misc_feature complement(2187633..2188202)
+ /locus_tag="SARI_02255"
+ /note="tRNA synthetases class I (E and Q), anti-codon
+ binding domain; Region: tRNA-synt_1c_C; pfam03950"
+ /db_xref="CDD:217810"
+ gene complement(2189428..2191380)
+ /locus_tag="SARI_02256"
+ CDS complement(2189428..2191380)
+ /locus_tag="SARI_02256"
+ /inference="protein motif:BlastProDom:IPR001127"
+ /inference="protein motif:HMMPfam:IPR001127"
+ /inference="protein motif:HMMPfam:IPR001996"
+ /inference="protein motif:HMMPfam:IPR003352"
+ /inference="protein motif:HMMTigr:IPR001127"
+ /inference="protein motif:HMMTigr:IPR010974"
+ /inference="protein motif:HMMTigr:IPR011535"
+ /inference="protein motif:ScanRegExp:IPR001127"
+ /inference="protein motif:ScanRegExp:IPR001996"
+ /inference="protein motif:superfamily:IPR011055"
+ /note="phosphoenolpyruvate-dependent sugar
+ phosphotransferase system; catalyzes the phosphorylation
+ of incoming sugar substrates concomitant with their
+ translocation across the cell membrane; IIB is
+ phosphorylated by IIA and then transfers the phosphoryl
+ group to the sugar; IIC forms the translocation channel"
+ /codon_start=1
+ /transl_table=11
+ /product="PTS system N-acetyl glucosamine specific
+ transporter subunits IIABC"
+ /protein_id="YP_001571269.1"
+ /db_xref="GI:161504157"
+ /db_xref="InterPro:IPR001127"
+ /db_xref="InterPro:IPR001996"
+ /db_xref="InterPro:IPR003352"
+ /db_xref="InterPro:IPR010974"
+ /db_xref="InterPro:IPR011055"
+ /db_xref="InterPro:IPR011535"
+ /translation="MNILGFFQRLGRALQLPIAVLPVAALLLRFGQPDLLNMPFIAQA
+ GGSIFDNLALVFAIGVASSWSKDSAGAAALAGAVGYFVMTKAMVTINPEINMGVLAGI
+ ITGLVGGAVYNRWSGIKLPDFLSFFGGKRFVPIATGFFCLVLAAIFGYVWPPVQHGIH
+ AGGEWIVSAGALGSGIFGFINRLLIPTGLHQVLNTIAWFQIGEFTNAAGTVFHGDINR
+ FYAGDGTAGMFMSGFFPIMMFGLPGAALAMYFAAPKERRPMVGGMLLSVAITAFLTGV
+ TEPLEFLFMFLAPLLYLLHAILTGISLFVATLLGIHAGFSFSAGAIDYALMYNLPAAS
+ NNVWMLLVMGVVFFIIYFLLFSAVIRMFNLKTPGREDKVDDMVTEEANSNTEEGLTQL
+ ATSYIAAVGGTDNLQAIDACITRLRLTVNDSARVNDAACKRLGASGVVKLNKQTIQVI
+ VGAKAESIGDEMKKVVARGPVAAVSADAAHVATPAPAVKPQAAPNAVTIAELVSPVTG
+ DVVALDQVPDEAFASKAVGDGVAVKPTDKTVVSPAAGTIVKIFNTNHAFCLETEKGAE
+ IVVHMGIDTVALNGQGFKRLVEEGAEVTAGQPVLELDLDFLNANARSMISPVVCSNID
+ DFSGLVIKADGHVVAGQTPLYEIKSK"
+ misc_feature complement(2189434..2191380)
+ /locus_tag="SARI_02256"
+ /note="PTS system N-acetyl glucosamine specific
+ transporter subunits IIABC; Provisional; Region: PRK10255"
+ /db_xref="CDD:182338"
+ misc_feature complement(2190256..2191293)
+ /locus_tag="SARI_02256"
+ /note="Phosphotransferase system IIC components,
+ glucose/maltose/N-acetylglucosamine-specific [Carbohydrate
+ transport and metabolism]; Region: PtsG; COG1263"
+ /db_xref="CDD:224183"
+ misc_feature complement(2189989..2190213)
+ /locus_tag="SARI_02256"
+ /note="PTS_IIB, PTS system, glucose/sucrose specific IIB
+ subunit. The bacterial phosphoenolpyruvate: sugar
+ phosphotransferase system (PTS) is a multi-protein system
+ involved in the regulation of a variety of metabolic and
+ transcriptional processes. This family...; Region:
+ PTS_IIB_glc; cd00212"
+ /db_xref="CDD:238130"
+ misc_feature complement(2190130..2190150)
+ /locus_tag="SARI_02256"
+ /note="active site turn [active]"
+ /db_xref="CDD:238130"
+ misc_feature complement(2190145..2190147)
+ /locus_tag="SARI_02256"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238130"
+ misc_feature complement(2189506..2189877)
+ /locus_tag="SARI_02256"
+ /note="PTS_IIA, PTS system, glucose/sucrose specific IIA
+ subunit. The bacterial phosphoenolpyruvate: sugar
+ phosphotransferase system (PTS) is a multi-protein system
+ involved in the regulation of a variety of metabolic and
+ transcriptional processes. This family...; Region:
+ PTS_IIA_glc; cd00210"
+ /db_xref="CDD:238128"
+ misc_feature complement(order(2189509..2189511,2189518..2189520,
+ 2189614..2189616,2189650..2189655,2189659..2189661,
+ 2189671..2189673,2189677..2189685,2189701..2189709,
+ 2189725..2189730,2189734..2189739,2189803..2189808,
+ 2189818..2189829))
+ /locus_tag="SARI_02256"
+ /note="HPr interaction site; other site"
+ /db_xref="CDD:238128"
+ misc_feature complement(order(2189518..2189520,2189644..2189646,
+ 2189650..2189655,2189659..2189661,2189671..2189673,
+ 2189677..2189679,2189716..2189718,2189728..2189730,
+ 2189734..2189736,2189803..2189808,2189812..2189814,
+ 2189818..2189823,2189827..2189829))
+ /locus_tag="SARI_02256"
+ /note="glycerol kinase (GK) interaction site [polypeptide
+ binding]; other site"
+ /db_xref="CDD:238128"
+ misc_feature complement(order(2189665..2189667,2189671..2189673,
+ 2189716..2189718,2189722..2189724))
+ /locus_tag="SARI_02256"
+ /note="active site"
+ /db_xref="CDD:238128"
+ misc_feature complement(2189671..2189673)
+ /locus_tag="SARI_02256"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238128"
+ gene 2191707..2192507
+ /gene="nagB"
+ /locus_tag="SARI_02257"
+ CDS 2191707..2192507
+ /gene="nagB"
+ /locus_tag="SARI_02257"
+ /inference="protein motif:HMMPanther:IPR004547"
+ /inference="protein motif:HMMPfam:IPR006148"
+ /inference="protein motif:HMMTigr:IPR004547"
+ /inference="protein motif:ScanRegExp:IPR004547"
+ /inference="similar to AA sequence:INSD:AAL19628.1"
+ /note="catalyzes the reversible formation of fructose
+ 6-phosphate from glucosamine 6-phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="glucosamine-6-phosphate deaminase"
+ /protein_id="YP_001571270.1"
+ /db_xref="GI:161504158"
+ /db_xref="InterPro:IPR004547"
+ /db_xref="InterPro:IPR006148"
+ /translation="MRLIPLNTAEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGT
+ PLTAYKALVEMHKAGEVSFKHVVTFNMDEYVGLPKEHPESYYSFMHRNFFDHVDIPAE
+ NINLLNGNAPDIDAECRQYEEKIRSYGKIHLFMGGVGNDGHIAFNEPASSLASRTRIK
+ TLTHDTRVANSRFFDGDVNQVPKYALTVGVGTLLDAEEVMILVLGHQKAQALQAAVEG
+ NVNHMWTISCLQLHPKAVVVCDEPATMELKVKTLKYFNELEAENIKGL"
+ misc_feature 2191707..2192453
+ /gene="nagB"
+ /locus_tag="SARI_02257"
+ /note="6-phosphogluconolactonase/Glucosamine-6-phosphate
+ isomerase/deaminase [Carbohydrate transport and
+ metabolism]; Region: NagB; COG0363"
+ /db_xref="CDD:223440"
+ misc_feature 2191734..2192447
+ /gene="nagB"
+ /locus_tag="SARI_02257"
+ /note="GlcN6P_deaminase: Glucosamine-6-phosphate (GlcN6P)
+ deaminase subfamily; GlcN6P deaminase catalyzes the
+ reversible conversion of GlcN6P to D-fructose-6-phosphate
+ (Fru6P) and ammonium. The reaction is an aldo-keto
+ isomerization coupled with an amination or...; Region:
+ GlcN6P_deaminase; cd01399"
+ /db_xref="CDD:238693"
+ misc_feature order(2191827..2191838,2191917..2191922,2192115..2192120,
+ 2192133..2192135,2192139..2192141,2192220..2192222,
+ 2192328..2192330)
+ /gene="nagB"
+ /locus_tag="SARI_02257"
+ /note="active site"
+ /db_xref="CDD:238693"
+ misc_feature order(2192154..2192156,2192160..2192165,2192187..2192189,
+ 2192352..2192372,2192394..2192402)
+ /gene="nagB"
+ /locus_tag="SARI_02257"
+ /note="trimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238693"
+ misc_feature order(2192157..2192162,2192178..2192189)
+ /gene="nagB"
+ /locus_tag="SARI_02257"
+ /note="allosteric site; other site"
+ /db_xref="CDD:238693"
+ misc_feature order(2192193..2192195,2192202..2192234,2192244..2192252)
+ /gene="nagB"
+ /locus_tag="SARI_02257"
+ /note="active site lid [active]"
+ /db_xref="CDD:238693"
+ misc_feature order(2192208..2192210,2192322..2192324,2192334..2192336,
+ 2192427..2192429,2192436..2192447)
+ /gene="nagB"
+ /locus_tag="SARI_02257"
+ /note="hexamer (dimer of trimers) interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:238693"
+ gene 2192507..2193721
+ /gene="nagA"
+ /locus_tag="SARI_02258"
+ CDS 2192507..2193721
+ /gene="nagA"
+ /locus_tag="SARI_02258"
+ /inference="protein motif:BlastProDom:IPR011550"
+ /inference="protein motif:HMMPfam:IPR006680"
+ /inference="protein motif:HMMTigr:IPR003764"
+ /inference="protein motif:superfamily:IPR011059"
+ /inference="similar to AA sequence:REFSEQ:NP_459668.1"
+ /note="catalyzes the formation of glucosamine 6-phosphate
+ from N-acetylglucosamine 6-phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="N-acetylglucosamine-6-phosphate deacetylase"
+ /protein_id="YP_001571271.1"
+ /db_xref="GI:161504159"
+ /db_xref="InterPro:IPR003764"
+ /db_xref="InterPro:IPR006680"
+ /db_xref="InterPro:IPR011059"
+ /db_xref="InterPro:IPR011550"
+ /translation="MLSPPCQSTRGSKFLISGVGMYALTQGRIYTGHEILDDHALVVA
+ NGLIDRVCPMAELPPGIEQRSLNGAILSPGFIDVQLNGCGGVQFNDTAEAVSVETLEI
+ MQKANEKSGCTSFLPTLITTSDDLMKQGIRVMREYLDKHPYQALGLHLEGPWLNLVKK
+ GTHNPDFVRKPDAALVDFLCDNADVITKVTLAPEMVSADVIAKLANAGIVVSAGHSNA
+ TLKEAKAGFRAGITFATHLFNAMPYITGREPGLAGAILDEADIYCGVIVDGLHVDYVN
+ IRNAKRLKGDKLCLVTDATAPAGANIEQFIFAGKTIYYRNGLCVDENGTLSGSSLTMI
+ EGVRNLVAHCGIALDEALRMATLYPARAIGVDKHLGSIAPGKVANLTAFTHNFRIIKT
+ IVNGDEVVDLSK"
+ misc_feature 2192567..2193694
+ /gene="nagA"
+ /locus_tag="SARI_02258"
+ /note="N-acetylglucosamine-6-phosphate deacetylase;
+ Region: nagA; TIGR00221"
+ /db_xref="CDD:232881"
+ misc_feature 2192570..2193694
+ /gene="nagA"
+ /locus_tag="SARI_02258"
+ /note="N-acetylglucosamine-6-phosphate deacetylase, NagA,
+ catalyzes the hydrolysis of the N-acetyl group of
+ N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to
+ glucosamine 6-phosphate and acetate. This is the first
+ committed step in the biosynthetic pathway to...; Region:
+ NagA; cd00854"
+ /db_xref="CDD:238434"
+ misc_feature order(2192741..2192743,2192747..2192749,2192957..2192959,
+ 2192990..2192992,2193149..2193151,2193212..2193214,
+ 2193221..2193226,2193317..2193319,2193383..2193385,
+ 2193482..2193484)
+ /gene="nagA"
+ /locus_tag="SARI_02258"
+ /note="active site"
+ /db_xref="CDD:238434"
+ misc_feature order(2193218..2193220,2193236..2193238,2193242..2193247,
+ 2193251..2193253,2193272..2193277,2193314..2193325,
+ 2193329..2193334,2193338..2193343,2193350..2193352)
+ /gene="nagA"
+ /locus_tag="SARI_02258"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238434"
+ gene 2193726..2194946
+ /locus_tag="SARI_02259"
+ CDS 2193726..2194946
+ /locus_tag="SARI_02259"
+ /inference="protein motif:HMMPfam:IPR000600"
+ /inference="protein motif:HMMPfam:IPR000835"
+ /inference="protein motif:ScanRegExp:IPR000600"
+ /inference="similar to AA sequence:INSD:AAV77961.1"
+ /note="'KEGG: eci:UTI89_C0670 4.0e-199 nagC;
+ transcriptional repressor of nag (N-acetylglucosamine)
+ operon K02565;
+ COG: COG1940 Transcriptional regulator/sugar kinase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571272.1"
+ /db_xref="GI:161504160"
+ /db_xref="InterPro:IPR000600"
+ /db_xref="InterPro:IPR000835"
+ /translation="MTPGGQAQIGNVDLVKQLNSAAVYRLIDQHGPISRIQIAEQSQL
+ APASVTKITRQLIERGLIKEVDQQASTGGRRAISIVTETRNFHAIGVRLGRHDTTLTL
+ YDLSSKVISEEHYPLPERTQETLEHALLNTLAVFINNCQRKIRELIAISVILPGLVDP
+ ESGVIRYMPHIQVENWGLVEALEKQFHVTCFVGHDIRSLALAEHYFGASQDCEDSILV
+ RVHRGTGAGIISNGRIFIGRNGNVGEIGHIQVEPLGERCHCGNFGCLETIAANAAIEQ
+ RVLNLLKQGYQSRVPLDDCTIKTICKAANRGDSLASEVIEHVGRHLGKTIAIAINLFN
+ PQKIVIAGEIIEADKVLLPAIESCINTQALKAFRKNLPVVRSTLDHRSAIGAFALVKR
+ AMLNGTLLQRLLES"
+ misc_feature 2193798..2193956
+ /locus_tag="SARI_02259"
+ /note="MarR family; Region: MarR; pfam01047"
+ /db_xref="CDD:201571"
+ misc_feature 2193981..2194943
+ /locus_tag="SARI_02259"
+ /note="Transcriptional regulator/sugar kinase
+ [Transcription / Carbohydrate transport and metabolism];
+ Region: NagC; COG1940"
+ /db_xref="CDD:224851"
+ misc_feature 2193990..2194463
+ /locus_tag="SARI_02259"
+ /note="Nucleotide-Binding Domain of the sugar
+ kinase/HSP70/actin superfamily; Region:
+ NBD_sugar-kinase_HSP70_actin; cd00012"
+ /db_xref="CDD:212657"
+ misc_feature order(2193999..2194010,2194014..2194016,2194020..2194022,
+ 2194308..2194310,2194386..2194397)
+ /locus_tag="SARI_02259"
+ /note="nucleotide binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:212657"
+ gene 2194993..2195745
+ /locus_tag="SARI_02260"
+ CDS 2194993..2195745
+ /locus_tag="SARI_02260"
+ /inference="protein motif:HMMPfam:IPR005834"
+ /inference="protein motif:HMMTigr:IPR006357"
+ /inference="similar to AA sequence:INSD:AAX64608.1"
+ /note="'KEGG: eci:UTI89_C0669 1.3e-129 nagD;
+ N-acetylglucosamine metabolism K02566;
+ COG: COG0647 Predicted sugar phosphatases of the HAD
+ superfamily;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="UMP phosphatase"
+ /protein_id="YP_001571273.1"
+ /db_xref="GI:161504161"
+ /db_xref="InterPro:IPR005834"
+ /db_xref="InterPro:IPR006357"
+ /translation="MTIKNVICDIDGVLMHDNVAVPGAAEFLTGILEKGLPLVLLTNY
+ PSQTGQDLANRFATAGVNVPDSVFYTSAMATADFLRRQEGKKAYVVGEGALIHELYKA
+ GFTITDVNPDFVIVGETRSYNWDMMHKAAFFVANGARFIATNPDTHGRGFYPACGALC
+ AGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETI
+ LVLSGVSTINDIDSMPFRPSWIYPSVAEIDVI"
+ misc_feature 2194999..2195742
+ /locus_tag="SARI_02260"
+ /note="UMP phosphatase; Provisional; Region: PRK10444"
+ /db_xref="CDD:182466"
+ misc_feature 2195008..2195418
+ /locus_tag="SARI_02260"
+ /note="Haloacid dehalogenase-like hydrolases. The haloacid
+ dehalogenase-like (HAD) superfamily includes L-2-haloacid
+ dehalogenase, epoxide hydrolase, phosphoserine
+ phosphatase, phosphomannomutase, phosphoglycolate
+ phosphatase, P-type ATPase, and many others; Region:
+ HAD_like; cd01427"
+ /db_xref="CDD:119389"
+ misc_feature order(2195017..2195025,2195116..2195121)
+ /locus_tag="SARI_02260"
+ /note="active site"
+ /db_xref="CDD:119389"
+ misc_feature 2195017..2195034
+ /locus_tag="SARI_02260"
+ /note="motif I; other site"
+ /db_xref="CDD:119389"
+ misc_feature 2195116..2195118
+ /locus_tag="SARI_02260"
+ /note="motif II; other site"
+ /db_xref="CDD:119389"
+ misc_feature <2195485..2195652
+ /locus_tag="SARI_02260"
+ /note="Haloacid dehalogenase-like hydrolases. The haloacid
+ dehalogenase-like (HAD) superfamily includes L-2-haloacid
+ dehalogenase, epoxide hydrolase, phosphoserine
+ phosphatase, phosphomannomutase, phosphoglycolate
+ phosphatase, P-type ATPase, and many others; Region:
+ HAD_like; cd01427"
+ /db_xref="CDD:119389"
+ gene 2195850..2196023
+ /locus_tag="SARI_02261"
+ CDS 2195850..2196023
+ /locus_tag="SARI_02261"
+ /note="'Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571274.1"
+ /db_xref="GI:161504162"
+ /translation="MLFLSIINRYCIFSFLVGKTLAPSPGLRHFLLQANTKSMTQQIT
+ GEGYVFYFRHIRY"
+ gene 2195992..2197656
+ /gene="asnB"
+ /locus_tag="SARI_02262"
+ CDS 2195992..2197656
+ /gene="asnB"
+ /locus_tag="SARI_02262"
+ /inference="protein motif:HMMPfam:IPR000583"
+ /inference="protein motif:HMMPfam:IPR001962"
+ /inference="protein motif:HMMTigr:IPR006426"
+ /inference="protein motif:ScanRegExp:IPR000583"
+ /inference="similar to AA sequence:INSD:AAX64607.1"
+ /note="'functions in asparagine biosynthesis; converts
+ glutamine, aspartate, ATP, and water to glutamate,
+ asparagine, pyrophosphate and AMP'"
+ /codon_start=1
+ /transl_table=11
+ /product="asparagine synthetase B"
+ /protein_id="YP_001571275.1"
+ /db_xref="GI:161504163"
+ /db_xref="InterPro:IPR000583"
+ /db_xref="InterPro:IPR001962"
+ /db_xref="InterPro:IPR006426"
+ /translation="MCSIFGIFDIKTDAVELRKKALELSRLMRHRGPDWSGIYACDNA
+ ILAHERLSIVDVNAGAQPLYNEKKTHVLTVNGEIYNHQALRAEYGDRYHFQTGSDCEV
+ ILALYQEKGPAFLDDLQGMFAFALYDSEKNAYLIGRDHIGIIPLYMGYDEFGNFYVAS
+ EMKALTPVCRTIKEFPAGSYLWSKDGEIRQYYQRDWFEFDAVKDNVTDKNALRQALEE
+ SVKSHLMSDVPYGVLLSGGLDSSIISAITKKFAARRVEDQEQTEAWWPQLHSFAVGLE
+ GSPDLKAAQEVANHLGTVHHEIHFTVQEGLDAIRDVIYHIETYDVTTIRASTPMYLMS
+ RKIKAMGIKMVLSGEGSDEVFGGYLYFHKAPNAKELHEETVRKLQALHMYDCARANKA
+ MSAWGVEARVPFLDKKFLDVAMCINPQDKMCGNGKMEKHVLRECFELYLPASVAWRQK
+ EQFSDGVGYSWIDTLKEVAAKQISDQQLETARFRFPYNTPSSKEAYLYREIFEELFPV
+ PSAAECVPGGPSVACSSAKAIEWDEAFKTMDDPSGRAVGVHQSAYQ"
+ misc_feature 2195992..2197650
+ /gene="asnB"
+ /locus_tag="SARI_02262"
+ /note="asparagine synthetase B; Provisional; Region: asnB;
+ PRK09431"
+ /db_xref="CDD:236513"
+ misc_feature 2195995..2196570
+ /gene="asnB"
+ /locus_tag="SARI_02262"
+ /note="Glutamine amidotransferases class-II (GATase)
+ asparagine synthase_B type. Asparagine synthetase B
+ catalyses the ATP-dependent conversion of aspartate to
+ asparagine. This enzyme is a homodimer, with each monomer
+ composed of a glutaminase domain and a...; Region: AsnB;
+ cd00712"
+ /db_xref="CDD:238364"
+ misc_feature order(2195995..2195997,2196139..2196141,2196214..2196222,
+ 2196286..2196288)
+ /gene="asnB"
+ /locus_tag="SARI_02262"
+ /note="active site"
+ /db_xref="CDD:238364"
+ misc_feature order(2196043..2196045,2196067..2196069,2196076..2196078,
+ 2196085..2196099,2196136..2196138)
+ /gene="asnB"
+ /locus_tag="SARI_02262"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238364"
+ misc_feature 2196628..2197359
+ /gene="asnB"
+ /locus_tag="SARI_02262"
+ /note="The C-terminal domain of Asparagine Synthase B.
+ This domain is always found associated n-terminal
+ amidotransferase domain. Family members that contain this
+ domain catalyse the conversion of aspartate to asparagine.
+ Asparagine synthetase B catalyzes the...; Region:
+ Asn_Synthase_B_C; cd01991"
+ /db_xref="CDD:238949"
+ misc_feature order(2196688..2196696,2196802..2196810,2196988..2196990,
+ 2197030..2197038)
+ /gene="asnB"
+ /locus_tag="SARI_02262"
+ /note="Ligand Binding Site [chemical binding]; other site"
+ /db_xref="CDD:238949"
+ misc_feature order(2196688..2196696,2196802..2196810,2196988..2196990,
+ 2197030..2197038)
+ /gene="asnB"
+ /locus_tag="SARI_02262"
+ /note="Molecular Tunnel; other site"
+ /db_xref="CDD:238949"
+ gene 2197877..2197950
+ /locus_tag="SARI_02263"
+ tRNA 2197877..2197950
+ /locus_tag="SARI_02263"
+ /product="tRNA-Met"
+ gene 2197961..2198042
+ /locus_tag="SARI_02264"
+ tRNA 2197961..2198042
+ /locus_tag="SARI_02264"
+ /product="tRNA-Leu"
+ gene 2198069..2198140
+ /locus_tag="SARI_02265"
+ tRNA 2198069..2198140
+ /locus_tag="SARI_02265"
+ /product="tRNA-Gln"
+ gene 2198179..2198250
+ /locus_tag="SARI_02266"
+ tRNA 2198179..2198250
+ /locus_tag="SARI_02266"
+ /product="tRNA-Gln"
+ gene 2198269..2198342
+ /locus_tag="SARI_02268"
+ tRNA 2198269..2198342
+ /locus_tag="SARI_02268"
+ /product="tRNA-Met"
+ gene 2198391..2198462
+ /locus_tag="SARI_02269"
+ tRNA 2198391..2198462
+ /locus_tag="SARI_02269"
+ /product="tRNA-Gln"
+ gene 2198496..2198567
+ /locus_tag="SARI_02270"
+ tRNA 2198496..2198567
+ /locus_tag="SARI_02270"
+ /product="tRNA-Gln"
+ gene complement(2198692..2199873)
+ /gene="ubiF"
+ /locus_tag="SARI_02271"
+ CDS complement(2198692..2199873)
+ /gene="ubiF"
+ /locus_tag="SARI_02271"
+ /inference="protein motif:FPrintScan:IPR003042"
+ /inference="protein motif:HMMPfam:IPR006076"
+ /inference="protein motif:HMMTigr:IPR010971"
+ /inference="protein motif:ScanRegExp:IPR010971"
+ /inference="similar to AA sequence:INSD:CAD05142.1"
+ /note="'catalyzes the formation of
+ 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol
+ from 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol;
+ functions in the biosynthesis of ubiquinone or coenzyme
+ Q'"
+ /codon_start=1
+ /transl_table=11
+ /product="2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol
+ hydroxylase"
+ /protein_id="YP_001571277.1"
+ /db_xref="GI:161504165"
+ /db_xref="InterPro:IPR003042"
+ /db_xref="InterPro:IPR006076"
+ /db_xref="InterPro:IPR010971"
+ /translation="MTMTNQPTEIAIVGGGMVGGALALGLAQQGFTVMVIEHAAPAPF
+ MADSQPDVRISAISAASVSLLKGQGVWETVQGMRSHPYRRLETWEWENAQVVFDAAEL
+ KLPLLGYMVENNVLQQALWQALEAHPGVTLRVPASLAALHRHNDGCALELADGERITP
+ KLVIGADGANSQVRQMAGIGIHAWQYAQSCMLITVKCENAPGDSTWQQFTPDGPRAFL
+ PLFDDWASLVWYDAPARICQLQGLSMTQLQVEINQHFPARLGAVMPVAAGAFPLTRRH
+ ALQYVQPGLALVGDAAHTIHPLAGQGVNLGYRDVDALIDVLASARSYGESWASHSVLK
+ RYQTRRMADNFMMQSGMDLFYAGFSNELPPLRILRNMGLMAAQRAGVLKRQALKYALG
+ V"
+ misc_feature complement(2198695..2199867)
+ /gene="ubiF"
+ /locus_tag="SARI_02271"
+ /note="2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol
+ hydroxylase; Reviewed; Region: ubiF; PRK08020"
+ /db_xref="CDD:181199"
+ misc_feature complement(2198698..2199777)
+ /gene="ubiF"
+ /locus_tag="SARI_02271"
+ /note="ubiquinone biosynthesis hydroxylase family protein;
+ Provisional; Region: PRK07608; cl17314"
+ /db_xref="CDD:247868"
+ gene 2199969..2201435
+ /locus_tag="SARI_02272"
+ CDS 2199969..2201435
+ /locus_tag="SARI_02272"
+ /inference="protein motif:HMMPanther:IPR005839"
+ /inference="protein motif:HMMPfam:IPR002792"
+ /inference="protein motif:HMMPfam:IPR007197"
+ /inference="protein motif:HMMPfam:IPR013848"
+ /inference="protein motif:HMMSmart:IPR006638"
+ /inference="protein motif:HMMTigr:IPR005839"
+ /inference="protein motif:HMMTigr:IPR006463"
+ /inference="protein motif:ScanRegExp:IPR005839"
+ /inference="similar to AA sequence:INSD:CAD05141.1"
+ /note="catalyzes the formation of
+ 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at
+ position 37 in tRNAs that read codons beginning with
+ uridine from N6-(dimethylallyl)adenosine (i(6)A)"
+ /codon_start=1
+ /transl_table=11
+ /product="(dimethylallyl)adenosine tRNA
+ methylthiotransferase"
+ /protein_id="YP_001571278.1"
+ /db_xref="GI:161504166"
+ /db_xref="InterPro:IPR002792"
+ /db_xref="InterPro:IPR005839"
+ /db_xref="InterPro:IPR006463"
+ /db_xref="InterPro:IPR006638"
+ /db_xref="InterPro:IPR007197"
+ /db_xref="InterPro:IPR013848"
+ /translation="MRPAFQPLFRKSKSMTKKLHIKTWGCQMNEYDSSKMADLLDATH
+ GYQLTDVAEEADVLLLNTCSIREKAQEKVFHQLGRWRLLKEKNPDLIIGVGGCVASQE
+ GEHIRQRAHYVDIIFGPQTLHRLPEMINSVRGDRSPVVDISFPEIEKFDRLPEPRAEG
+ PTAFVSIMEGCNKYCTYCVVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVN
+ AWRGENYDGTTGTFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFL
+ HLPVQSGSDRVLNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETSDDFEK
+ TMKLIADVNFDMSYSFIFSARPGTPAADMVDDVPEEEKKQRLYILQERINQQAMAWSR
+ RMLGSTQRILVEGTSRKNIMELSGRTENNRVVNFEGTPEMIGKFVDVEITDVYPNSLR
+ GKVVRTEDEMGLRVAETPESVIARTRKENELGVGFYQP"
+ misc_feature 2200008..2201345
+ /locus_tag="SARI_02272"
+ /note="(dimethylallyl)adenosine tRNA
+ methylthiotransferase; Provisional; Region: PRK14325"
+ /db_xref="CDD:237673"
+ misc_feature 2200020..2200322
+ /locus_tag="SARI_02272"
+ /note="Uncharacterized protein family UPF0004; Region:
+ UPF0004; pfam00919"
+ /db_xref="CDD:216191"
+ misc_feature 2200476..2201081
+ /locus_tag="SARI_02272"
+ /note="Radical SAM superfamily. Enzymes of this family
+ generate radicals by combining a 4Fe-4S cluster and
+ S-adenosylmethionine (SAM) in close proximity. They are
+ characterized by a conserved CxxxCxxC motif, which
+ coordinates the conserved iron-sulfur cluster; Region:
+ Radical_SAM; cd01335"
+ /db_xref="CDD:100105"
+ misc_feature order(2200479..2200481,2200485..2200487,2200491..2200493,
+ 2200497..2200505,2200605..2200607,2200611..2200616,
+ 2200719..2200727,2200803..2200805,2200929..2200931,
+ 2201022..2201024)
+ /locus_tag="SARI_02272"
+ /note="FeS/SAM binding site; other site"
+ /db_xref="CDD:100105"
+ misc_feature 2201142..2201330
+ /locus_tag="SARI_02272"
+ /note="TRAM domain; Region: TRAM; pfam01938"
+ /db_xref="CDD:110897"
+ unsure 2200053..2200227
+ /locus_tag="SARI_02272"
+ /note="Sequence derived from one plasmid subclone"
+ gene 2201640..2202686
+ /locus_tag="SARI_02273"
+ CDS 2201640..2202686
+ /locus_tag="SARI_02273"
+ /inference="protein motif:HMMPfam:IPR003714"
+ /inference="similar to AA sequence:INSD:AAL19620.1"
+ /note="'KEGG: reh:H16_A0527 9.8e-86 phoH; phosphate
+ starvation-inducible protein PhoH,predicted ATPase;
+ COG: COG1702 Phosphate starvation-inducible protein PhoH,
+ predicted ATPase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571279.1"
+ /db_xref="GI:161504167"
+ /db_xref="InterPro:IPR003714"
+ /translation="MNIDTREITLEPADNARLLSLCGPFDDNIKQLERRLGIEINRRD
+ NHFKLTGRPICVTAATDILRSLYVDTAPMRGQIQDIEPEQIHLAIKEARVLEQSAESV
+ PDYGKAINIKTRRGVIKPRTPNQAQYIANILDHDITFGVGPAGTGKTYLAVAAAVDAL
+ ERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIER
+ NVIEVAPLAYMRGRTLNDAFIILDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDL
+ PRYTKSGLRHAIEVLAEVDEISFNLFHSEDVVRHPVVARIVNAYEAWEEAEQKRKAAL
+ AAERKREAQEQEQK"
+ misc_feature 2201640..2202608
+ /locus_tag="SARI_02273"
+ /note="Phosphate starvation-inducible protein PhoH,
+ predicted ATPase [Signal transduction mechanisms]; Region:
+ PhoH; COG1702"
+ /db_xref="CDD:224616"
+ misc_feature 2201988..2202602
+ /locus_tag="SARI_02273"
+ /note="PhoH-like protein; Region: PhoH; pfam02562"
+ /db_xref="CDD:190347"
+ gene 2202683..2203150
+ /locus_tag="SARI_02274"
+ CDS 2202683..2203150
+ /locus_tag="SARI_02274"
+ /inference="protein motif:BlastProDom:IPR002036"
+ /inference="protein motif:HMMPfam:IPR002036"
+ /inference="protein motif:HMMTigr:IPR002036"
+ /inference="protein motif:ScanRegExp:IPR002036"
+ /inference="similar to AA sequence:INSD:CAD05139.1"
+ /note="'KEGG: dps:DP1605 3.4e-09 probable pyridoxal
+ phosphate biosynthetic protein K03474;
+ COG: COG0319 Predicted metal-dependent hydrolase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative metalloprotease"
+ /protein_id="YP_001571280.1"
+ /db_xref="GI:161504168"
+ /db_xref="InterPro:IPR002036"
+ /translation="MSQVILDLQLACENHSGLPDEAQFQRWLDGVIPQFQEASEVTIR
+ LVDEAESHDLNLTYRGKDKPTNVLSFPFEAPPGIEMPLLGDLIICRQVVEQEAQEQDK
+ PLEAHWAHMVVHGSLHLLGYDHIDDDEAEEMESLETEIMLAMGYEDPYIAEKE"
+ misc_feature 2202701..2203144
+ /locus_tag="SARI_02274"
+ /note="metal-binding heat shock protein; Provisional;
+ Region: PRK00016"
+ /db_xref="CDD:234575"
+ gene 2203307..2204185
+ /locus_tag="SARI_02275"
+ CDS 2203307..2204185
+ /locus_tag="SARI_02275"
+ /inference="protein motif:HMMPfam:IPR000644"
+ /inference="protein motif:HMMPfam:IPR005170"
+ /inference="similar to AA sequence:INSD:AAL19618.1"
+ /note="'KEGG: eci:UTI89_C0656 1.1e-148 ybeX; putative
+ transport protein K06189;
+ COG: COG4535 Putative Mg2+ and Co2+ transporter CorC;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571281.1"
+ /db_xref="GI:161504169"
+ /db_xref="InterPro:IPR000644"
+ /db_xref="InterPro:IPR005170"
+ /translation="MSDDNSHSSDTVNSKKGFFSLLLSQLFHGEPKNRDELLALIRDS
+ GQNELIDEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSR
+ FPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVLRPAVVVPESKRVDRMLKEFRS
+ QRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDEEDDIDFRQLSRHTWTIRALA
+ SIEDFNDAFRTHFSDEEVDTIGGLVMQAFGHLPARGETIDIDGYQFKVAMADSRRIIQ
+ VHVRIPDDSPQPKLDE"
+ misc_feature 2203307..2204182
+ /locus_tag="SARI_02275"
+ /note="magnesium/cobalt efflux protein CorC; Provisional;
+ Region: PRK15094"
+ /db_xref="CDD:185050"
+ misc_feature 2203535..2203864
+ /locus_tag="SARI_02275"
+ /note="This cd contains two tandem repeats of the
+ cystathionine beta-synthase (CBS pair) domains associated
+ with the CorC_HlyC domain. CorC_HlyC is a transporter
+ associated domain. This small domain is found in Na+/H+
+ antiporters, in proteins involved in...; Region:
+ CBS_pair_CorC_HlyC_assoc; cd04590"
+ /db_xref="CDD:239963"
+ misc_feature 2203919..2204152
+ /locus_tag="SARI_02275"
+ /note="Transporter associated domain; Region: CorC_HlyC;
+ smart01091"
+ /db_xref="CDD:215020"
+ gene 2204204..2205742
+ /gene="lnt"
+ /locus_tag="SARI_02276"
+ CDS 2204204..2205742
+ /gene="lnt"
+ /locus_tag="SARI_02276"
+ /inference="protein motif:Gene3D:IPR003010"
+ /inference="protein motif:HMMPfam:IPR003010"
+ /inference="protein motif:HMMTigr:IPR004563"
+ /inference="protein motif:superfamily:IPR003010"
+ /inference="similar to AA sequence:REFSEQ:YP_215681.1"
+ /note="Transfers the fatty acyl group on membrane
+ lipoproteins"
+ /codon_start=1
+ /transl_table=11
+ /product="apolipoprotein N-acyltransferase"
+ /protein_id="YP_001571282.1"
+ /db_xref="GI:161504170"
+ /db_xref="InterPro:IPR003010"
+ /db_xref="InterPro:IPR004563"
+ /translation="MAFASLIERQRIRLLLALLFGACGTLAFSPYDVWPAAIVSLVGL
+ QALTFNRRPLQSAAIGYCWGLGLFGSGINWVYVSIAQFGGMPGPVNVFLVVLLAAYLS
+ LYTGLFAGILSRLWPKTDWLRAAIAAPAIWQITEFLRGWVLTGFPWLQFGYSQVDGPL
+ KGLAPVMGVEAINFLLMMVSGLLALTLATRNWRPLAAAIVLFALPFPLRYIQWFTLEP
+ SKATQVSLVQGDIPQSLKWDENQLLNTLKIYLNETRPELGKSQIIIWPESAIPDLEIN
+ QQPFLRSLDEMLREKNSTLITGIVDARLNKQNRYDTYNTIITLGKDNPYSYDSPNRYN
+ KNHLVPFGEFVPLESILRPLAPFFDLPMSSFSRGPYIQPQLHAHDYKLTAAICYEIIL
+ GEQVRDNFRPDTDYLLTISNDAWFGKSIGPWQHFQMARMRSLELARPLLRSTNNGITA
+ VIGPQGEIQAMIPQFTRQVLTTHVTPTTGLTPYARTGNWPLWVLTALFAFGAVVMSLR
+ QRRK"
+ misc_feature 2204228..2205739
+ /gene="lnt"
+ /locus_tag="SARI_02276"
+ /note="apolipoprotein N-acyltransferase; Reviewed; Region:
+ lnt; PRK00302"
+ /db_xref="CDD:234721"
+ misc_feature 2204873..2205694
+ /gene="lnt"
+ /locus_tag="SARI_02276"
+ /note="Apolipoprotein N-acyl transferase (class 9
+ nitrilases); Region: ALP_N-acyl_transferase; cd07571"
+ /db_xref="CDD:143595"
+ misc_feature order(2205002..2205004,2205206..2205208,2205218..2205220,
+ 2205230..2205232,2205362..2205367,2205371..2205376,
+ 2205437..2205439)
+ /gene="lnt"
+ /locus_tag="SARI_02276"
+ /note="putative active site [active]"
+ /db_xref="CDD:143595"
+ misc_feature order(2205002..2205004,2205206..2205208,2205362..2205364)
+ /gene="lnt"
+ /locus_tag="SARI_02276"
+ /note="catalytic triad [active]"
+ /db_xref="CDD:143595"
+ misc_feature order(2205209..2205220,2205227..2205229,2205248..2205256,
+ 2205365..2205367,2205371..2205385,2205392..2205397,
+ 2205482..2205487,2205491..2205499,2205503..2205508,
+ 2205542..2205547,2205671..2205685)
+ /gene="lnt"
+ /locus_tag="SARI_02276"
+ /note="putative dimer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:143595"
+ gene 2206079..2207005
+ /locus_tag="SARI_02277"
+ CDS 2206079..2207005
+ /locus_tag="SARI_02277"
+ /inference="protein motif:HMMPfam:IPR001638"
+ /inference="protein motif:HMMSmart:IPR001638"
+ /inference="similar to AA sequence:REFSEQ:YP_151281.1"
+ /note="'KEGG: bur:Bcep18194_A4762 7.7e-22 ABC amino acid
+ transporter, periplasmic ligand binding protein K01713;
+ COG: COG0834 ABC-type amino acid transport/signal
+ transduction systems, periplasmic component/domain;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="glutamate and aspartate transporter subunit"
+ /protein_id="YP_001571283.1"
+ /db_xref="GI:161504171"
+ /db_xref="InterPro:IPR001638"
+ /translation="MIKELDMQLRKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAK
+ NGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLLPITSQ
+ NRIPLLQNGTFDFECGSTTNNLERQKQAAFSDTIFVVGTRLLTKKGGDIKDFPDLKGK
+ AVVVTSGTTSEILLHKLNEEQKMGMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGE
+ RAKAKKPDNWEIVGKPQSQEAYGCMLRKNDPEFKKLMDDTIAQAQTSGEAEKWFDKWF
+ KNPIPPKNLNMNFELSDEMKALFKAPNDKALN"
+ misc_feature 2206097..2207002
+ /locus_tag="SARI_02277"
+ /note="glutamate and aspartate transporter subunit;
+ Provisional; Region: PRK10797"
+ /db_xref="CDD:236763"
+ misc_feature 2206220..2206906
+ /locus_tag="SARI_02277"
+ /note="Bacterial periplasmic transport systems use
+ membrane-bound complexes and substrate-bound,
+ membrane-associated, periplasmic binding proteins (PBPs)
+ to transport a wide variety of substrates, such as, amino
+ acids, peptides, sugars, vitamins and inorganic...;
+ Region: PBPb; cd00134"
+ /db_xref="CDD:238078"
+ misc_feature order(2206244..2206246,2206379..2206381,2206454..2206456,
+ 2206583..2206585,2206709..2206711)
+ /locus_tag="SARI_02277"
+ /note="substrate binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:238078"
+ misc_feature order(2206658..2206660,2206670..2206672,2206688..2206690)
+ /locus_tag="SARI_02277"
+ /note="membrane-bound complex binding site; other site"
+ /db_xref="CDD:238078"
+ misc_feature 2206790..2206807
+ /locus_tag="SARI_02277"
+ /note="hinge residues; other site"
+ /db_xref="CDD:238078"
+ gene 2207001..2207162
+ /locus_tag="SARI_02278"
+ misc_RNA 2207001..2207162
+ /locus_tag="SARI_02278"
+ /product="SroC RNA"
+ /inference="nucleotide motif:Rfam:RF00369"
+ /note="Rfam score 175.86"
+ gene 2207166..2207906
+ /locus_tag="SARI_02279"
+ CDS 2207166..2207906
+ /locus_tag="SARI_02279"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="protein motif:HMMTigr:IPR010065"
+ /inference="similar to AA sequence:INSD:AAV77970.1"
+ /note="'KEGG: eca:ECA0855 3.0e-20 ABC transporter permease
+ protein K02028;
+ COG: COG0765 ABC-type amino acid transport system,
+ permease component;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571284.1"
+ /db_xref="GI:161504172"
+ /db_xref="InterPro:IPR000515"
+ /db_xref="InterPro:IPR010065"
+ /translation="MSIDWNWGIFLQEAPFGNTTYLGWIWSGFQVTVALSITAWIIAF
+ LIGSIFGILRTVPNRFLSGLGALYVELFRNVPLIVQFFTWYLVVPELLPEDLGMWFKA
+ ELDPNIQFFLSSMICLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQTYRYVL
+ LPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLA
+ YVLINAVIMLVMSLVERKVRLPGNVGSK"
+ misc_feature 2207226..2207879
+ /locus_tag="SARI_02279"
+ /note="ABC-type arginine transport system, permease
+ component [Amino acid transport and metabolism]; Region:
+ ArtQ; COG4215"
+ /db_xref="CDD:226670"
+ misc_feature 2207250..2207849
+ /locus_tag="SARI_02279"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature order(2207298..2207303,2207310..2207315,2207328..2207330,
+ 2207358..2207369,2207373..2207402,2207409..2207414,
+ 2207418..2207420,2207523..2207528,2207532..2207534,
+ 2207538..2207540,2207547..2207552,2207556..2207558,
+ 2207568..2207573,2207580..2207582,2207631..2207633,
+ 2207673..2207678,2207685..2207687,2207706..2207717,
+ 2207724..2207729,2207766..2207771,2207799..2207804,
+ 2207811..2207816,2207820..2207825,2207832..2207837,
+ 2207844..2207849)
+ /locus_tag="SARI_02279"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(2207376..2207420,2207706..2207723)
+ /locus_tag="SARI_02279"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(2207418..2207420,2207508..2207510,2207724..2207726,
+ 2207760..2207762,2207769..2207771,2207799..2207801)
+ /locus_tag="SARI_02279"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(2207583..2207621,2207637..2207642,2207652..2207654)
+ /locus_tag="SARI_02279"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene 2207906..2208580
+ /locus_tag="SARI_02280"
+ CDS 2207906..2208580
+ /locus_tag="SARI_02280"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="protein motif:HMMTigr:IPR010065"
+ /inference="similar to AA sequence:REFSEQ:NP_805954.1"
+ /note="'KEGG: ret:RHE_PF00254 1.5e-26 glnP, glnQ;
+ glutamine ABC transporter, ATP-binding protein K02028;
+ COG: COG0765 ABC-type amino acid transport system,
+ permease component;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571285.1"
+ /db_xref="GI:161504173"
+ /db_xref="InterPro:IPR000515"
+ /db_xref="InterPro:IPR010065"
+ /translation="MYDFDWSSIIPSMPYLLAGLVITLKITVTAVVVGIVWGTILAVM
+ RLSSFTPIAWFAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKTDIRLISAMV
+ AFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMRLIILPQAFRAMVPLLLT
+ QGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLLVSY
+ LKKRTV"
+ misc_feature 2207906..2208574
+ /locus_tag="SARI_02280"
+ /note="ABC-type arginine transport system, permease
+ component [Amino acid transport and metabolism]; Region:
+ ArtQ; COG4215"
+ /db_xref="CDD:226670"
+ misc_feature 2207963..2208547
+ /locus_tag="SARI_02280"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature order(2208011..2208016,2208023..2208028,2208041..2208043,
+ 2208071..2208082,2208086..2208115,2208122..2208127,
+ 2208131..2208133,2208221..2208226,2208230..2208232,
+ 2208236..2208238,2208245..2208250,2208254..2208256,
+ 2208266..2208271,2208278..2208280,2208329..2208331,
+ 2208371..2208376,2208383..2208385,2208404..2208415,
+ 2208422..2208427,2208464..2208469,2208497..2208502,
+ 2208509..2208514,2208518..2208523,2208530..2208535,
+ 2208542..2208547)
+ /locus_tag="SARI_02280"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(2208089..2208133,2208404..2208421)
+ /locus_tag="SARI_02280"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(2208131..2208133,2208206..2208208,2208422..2208424,
+ 2208458..2208460,2208467..2208469,2208497..2208499)
+ /locus_tag="SARI_02280"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(2208281..2208319,2208335..2208340,2208350..2208352)
+ /locus_tag="SARI_02280"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene 2208580..2209305
+ /locus_tag="SARI_02281"
+ CDS 2208580..2209305
+ /locus_tag="SARI_02281"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:INSD:"
+ /note="'KEGG: stt:t2211 3.8e-123 gltL; glutamate/aspartate
+ transport ATP-binding protein GltL K02028;
+ COG: COG1126 ABC-type polar amino acid transport system,
+ ATPase component;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571286.1"
+ /db_xref="GI:161504174"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MITLKNVSKWYGHFQVLTDCSTEVKKGEVVVVCGPSGSGKSTLI
+ KTVNGLEPVQKGEITVNGIIVNDKKTDLAKLRSRVGMVFQHFELFPHLSIIENLTLAQ
+ VKVLKRDKAAARDKGLKLLERVGLSAHANKYPAQLSGGQQQRVAIARALCMDPIAMLF
+ DEPTSALDPEMINEVLDVMVELAHEGMTMMVVTHEMGFARKVANRVIFMDEGKIVEDS
+ PKEEFFANPSSDRAKDFLAKILH"
+ misc_feature 2208580..2209299
+ /locus_tag="SARI_02281"
+ /note="ABC-type polar amino acid transport system, ATPase
+ component [Amino acid transport and metabolism]; Region:
+ GlnQ; COG1126"
+ /db_xref="CDD:224051"
+ misc_feature 2208583..2209221
+ /locus_tag="SARI_02281"
+ /note="ATP-binding cassette domain of the histidine and
+ glutamine transporters; Region: ABC_HisP_GlnQ; cd03262"
+ /db_xref="CDD:213229"
+ misc_feature 2208679..2208702
+ /locus_tag="SARI_02281"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213229"
+ misc_feature order(2208688..2208693,2208697..2208705,2208829..2208831,
+ 2209060..2209065,2209159..2209161)
+ /locus_tag="SARI_02281"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213229"
+ misc_feature 2208820..2208831
+ /locus_tag="SARI_02281"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213229"
+ misc_feature 2208988..2209017
+ /locus_tag="SARI_02281"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213229"
+ misc_feature 2209048..2209065
+ /locus_tag="SARI_02281"
+ /note="Walker B; other site"
+ /db_xref="CDD:213229"
+ misc_feature 2209072..2209083
+ /locus_tag="SARI_02281"
+ /note="D-loop; other site"
+ /db_xref="CDD:213229"
+ misc_feature 2209147..2209167
+ /locus_tag="SARI_02281"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213229"
+ gene 2209422..2210357
+ /gene="rihA"
+ /locus_tag="SARI_02282"
+ CDS 2209422..2210357
+ /gene="rihA"
+ /locus_tag="SARI_02282"
+ /inference="protein motif:BlastProDom:IPR001910"
+ /inference="protein motif:Gene3D:IPR001910"
+ /inference="protein motif:HMMPfam:IPR001910"
+ /inference="protein motif:ScanRegExp:IPR001910"
+ /inference="protein motif:superfamily:IPR001910"
+ /inference="similar to AA sequence:INSD:AAG54985.1"
+ /note="'Hydrolyzes with equal efficiency cytidine or
+ uridine to ribose and cytosine or uracil, respectively;
+ pyrimidine-specific'"
+ /codon_start=1
+ /transl_table=11
+ /product="ribonucleoside hydrolase 1"
+ /protein_id="YP_001571287.1"
+ /db_xref="GI:161504175"
+ /db_xref="InterPro:IPR001910"
+ /translation="MALPIILDCDPGHDDAIAIVLALASPELDVKAITSSAGNQTPDK
+ TLRNVLRMLTLLKRSDIPVAGGAVKPLMRELIIADNVHGESGLDGPALPEPSFAPQNC
+ TAVELMAKTLRESPQPVTLVATGPQTNVALLLNSHPELHAKIARIVIMGGAMGLGNWT
+ PAAEFNIYVDPEAAEIVFQSGIPVLMAGLDVTHKAQIHTADIERFRAIGNPISTIVAE
+ LLDFFLEYHKDEKWGFTGAPLHDPCTIAWLLKAELFTTVERWVGVETQGKYTQGMTVV
+ DYYFLTGNKPNATVMVDVDREGFVDLLAERLKFYG"
+ misc_feature 2209431..2210342
+ /gene="rihA"
+ /locus_tag="SARI_02282"
+ /note="nuc_hydro_IU_UC_XIUA: inosine-uridine preferring,
+ xanthosine-inosine-uridine-adenosine-preferring and,
+ uridine-cytidine preferring nucleoside hydrolases.
+ Nucleoside hydrolases cleave the N-glycosidic bond in
+ nucleosides generating ribose and the...; Region:
+ nuc_hydro_IU_UC_XIUA; cd02651"
+ /db_xref="CDD:239117"
+ misc_feature order(2209449..2209451,2209461..2209466,2209536..2209538,
+ 2209662..2209664,2209791..2209793,2209893..2209895,
+ 2209911..2209913,2209917..2209919,2210142..2210144)
+ /gene="rihA"
+ /locus_tag="SARI_02282"
+ /note="active site"
+ /db_xref="CDD:239117"
+ misc_feature order(2209632..2209634,2209824..2209826,2209947..2209949,
+ 2210211..2210213,2210217..2210222,2210229..2210231)
+ /gene="rihA"
+ /locus_tag="SARI_02282"
+ /note="tetramer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:239117"
+ gene complement(2210453..2210926)
+ /locus_tag="SARI_02283"
+ CDS complement(2210453..2210926)
+ /locus_tag="SARI_02283"
+ /inference="protein motif:HMMPfam:IPR009912"
+ /inference="similar to AA sequence:INSD:AAX64588.1"
+ /note="'COG: NOG08739 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571288.1"
+ /db_xref="GI:161504176"
+ /db_xref="InterPro:IPR009912"
+ /translation="MNKVAQYYRELVASLSERLRNGERDINALVEQARQRVMQTGELT
+ RTELDELTRAVRRDLEEFAMSYEESQDDSVFMRVIKESLWQELADITDKTQLEWREVF
+ QDLNHHGVYHSGEVVGLGNLVCEKCHFHLAVYTPDVLPLCPKCGHDQFQRRPFEP"
+ misc_feature complement(2210456..2210926)
+ /locus_tag="SARI_02283"
+ /note="hypothetical protein; Provisional; Region:
+ PRK11032"
+ /db_xref="CDD:182915"
+ misc_feature complement(<2210741..>2210926)
+ /locus_tag="SARI_02283"
+ /note="SPX domain; Region: SPX; pfam03105"
+ /db_xref="CDD:217372"
+ gene 2211160..2213742
+ /gene="leuS"
+ /locus_tag="SARI_02284"
+ CDS 2211160..2213742
+ /gene="leuS"
+ /locus_tag="SARI_02284"
+ /inference="protein motif:FPrintScan:IPR002302"
+ /inference="protein motif:HMMPfam:IPR002300"
+ /inference="protein motif:HMMPfam:IPR013155"
+ /inference="protein motif:HMMTigr:IPR002302"
+ /inference="protein motif:ScanRegExp:IPR001412"
+ /inference="protein motif:superfamily:IPR009008"
+ /inference="protein motif:superfamily:IPR009080"
+ /note="'leucine--tRNA ligase; LeuRS; class-I
+ aminoacyl-tRNA synthetase; charges leucine by linking
+ carboxyl group to alpha-phosphate of ATP and then
+ transfers aminoacyl-adenylate to its tRNA; due to the
+ large number of codons that tRNA(Leu) recognizes, the
+ leucyl-tRNA synthetase does not recognize the anticodon
+ loop of the tRNA, but instead recognition is dependent on
+ a conserved discriminator base A37 and a long arm; an
+ editing domain hydrolyzes misformed products; in
+ Methanothermobacter thermautotrophicus this enzyme
+ associates with prolyl-tRNA synthetase'"
+ /codon_start=1
+ /transl_table=11
+ /product="leucyl-tRNA synthetase"
+ /protein_id="YP_001571289.1"
+ /db_xref="GI:161504177"
+ /db_xref="InterPro:IPR001412"
+ /db_xref="InterPro:IPR002300"
+ /db_xref="InterPro:IPR002302"
+ /db_xref="InterPro:IPR009008"
+ /db_xref="InterPro:IPR009080"
+ /db_xref="InterPro:IPR013155"
+ /translation="MQEQYRPEEIESKVQLHWDEKRTFEVTEDESKEKYYCLSMLPYP
+ SGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTY
+ DNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLVYKKTSAVNWCP
+ NDQTVLANEQVIDGCCWRCDSKVERKEIPQWFIKITAYADELLSDLDKLDHWPDTVKT
+ MQRNWIGRSEGVEITFDVKGYDNTLTVYTTRPDTFMGATYLAVAAGHPLAQKAAANNP
+ ELAVFIDECRNTKVAEAEMATMEKKGVDTGFKAIHPLTGEEIPVWAANFVLMEYGTGA
+ VMAVPGHDQRDYEFATKYGLTIKPVILAADGSAPDLSTQALTEKGVLFNSGEFDGLAF
+ EAAFNAIADKLAAKGVGERKVNYRLRDWGVSRQRYWGAPIPMVTLEDGTVIPTPEDQL
+ PVILPEDVVMDGITSPIKADPAWAKTTVNGTPAMRETDTFDTFMESSWYYARYTCPQY
+ QEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVTSDEPAKQLLCQ
+ GMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSKSK
+ NNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEGANRFIKRVWKLVYEHTA
+ KGSVAALNVDTLNDDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKLAKAP
+ QDSEQDRALMQEALLAVVRMLNPFTPHVCFTLWQALEGEGDIDNAPWPVADDKAMVEE
+ STLIVVQVNGKVRGKITVPVNATEEQVRERAGQEHLVAKYLDGVTVRKVIYVPGKLLN
+ LVVG"
+ misc_feature 2211160..2213739
+ /gene="leuS"
+ /locus_tag="SARI_02284"
+ /note="leucyl-tRNA synthetase; Validated; Region: leuS;
+ PRK00390"
+ /db_xref="CDD:234743"
+ misc_feature 2211259..>2211834
+ /gene="leuS"
+ /locus_tag="SARI_02284"
+ /note="catalytic core domain of leucyl-tRNA synthetases;
+ Region: LeuRS_core; cd00812"
+ /db_xref="CDD:173906"
+ misc_feature 2211304..2211315
+ /gene="leuS"
+ /locus_tag="SARI_02284"
+ /note="HIGH motif; other site"
+ /db_xref="CDD:173906"
+ misc_feature 2211841..2212371
+ /gene="leuS"
+ /locus_tag="SARI_02284"
+ /note="Leucyl-tRNA synthetase, Domain 2; Region:
+ tRNA-synt_1_2; pfam13603"
+ /db_xref="CDD:222257"
+ misc_feature <2212408..2213133
+ /gene="leuS"
+ /locus_tag="SARI_02284"
+ /note="nucleotidyl transferase superfamily; Region:
+ nt_trans; cl00015"
+ /db_xref="CDD:241550"
+ misc_feature 2213020..2213031
+ /gene="leuS"
+ /locus_tag="SARI_02284"
+ /note="active site"
+ /db_xref="CDD:173912"
+ misc_feature 2213020..2213031
+ /gene="leuS"
+ /locus_tag="SARI_02284"
+ /note="KMSKS motif; other site"
+ /db_xref="CDD:173912"
+ misc_feature 2213131..2213487
+ /gene="leuS"
+ /locus_tag="SARI_02284"
+ /note="Anticodon-binding domain of bacterial and
+ eukaryotic mitochondrial leucyl tRNA synthetases; Region:
+ Anticodon_Ia_Leu_BEm; cd07958"
+ /db_xref="CDD:153412"
+ misc_feature order(2213140..2213142,2213149..2213154,2213161..2213163,
+ 2213173..2213175,2213326..2213328,2213338..2213340,
+ 2213347..2213352,2213359..2213361,2213368..2213370,
+ 2213380..2213382)
+ /gene="leuS"
+ /locus_tag="SARI_02284"
+ /note="tRNA binding surface [nucleotide binding]; other
+ site"
+ /db_xref="CDD:153412"
+ gene 2213757..2214347
+ /locus_tag="SARI_02285"
+ CDS 2213757..2214347
+ /locus_tag="SARI_02285"
+ /inference="protein motif:HMMPfam:IPR007485"
+ /inference="similar to AA sequence:REFSEQ:YP_151293.1"
+ /note="'COG: COG2980 Rare lipoprotein B;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="LPS-assembly lipoprotein RlpB"
+ /protein_id="YP_001571290.2"
+ /db_xref="GI:448236255"
+ /db_xref="InterPro:IPR007485"
+ /translation="MRYLVTLLLSLAVLVTAGCGWHLRSTTQVPASMKTMILDSGDPN
+ GPLSRAVRNQLRLNNVNLLEKDTTRKDVPSLRLGTVTISQDTASVFQDGQTAEYQMVM
+ TVNASVLIPGHDIYPISTKVYRSFFDNPQMALAKDNEQAMIVQEMYDKAAEQLIRKLT
+ SVRAADIQATKEEATADNETVPPASTPARVSTTLNH"
+ misc_feature 2213808..2214332
+ /locus_tag="SARI_02285"
+ /note="LPS-assembly lipoprotein RlpB; Provisional; Region:
+ PRK10796"
+ /db_xref="CDD:236762"
+ gene 2214347..2215378
+ /gene="holA"
+ /locus_tag="SARI_02286"
+ CDS 2214347..2215378
+ /gene="holA"
+ /locus_tag="SARI_02286"
+ /inference="protein motif:HMMPfam:IPR010372"
+ /inference="protein motif:HMMTigr:IPR005790"
+ /inference="protein motif:superfamily:IPR008921"
+ /inference="similar to AA sequence:REFSEQ:NP_455222.1"
+ /note="required for the assembly and function of the DNAX
+ complex which is required for the assembly of the beta
+ subunit onto primed DNA"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA polymerase III subunit delta"
+ /protein_id="YP_001571291.1"
+ /db_xref="GI:161504179"
+ /db_xref="InterPro:IPR005790"
+ /db_xref="InterPro:IPR008921"
+ /db_xref="InterPro:IPR010372"
+ /translation="MIRLYPEQLRAQLKEGLRAAYLLLGNDPLLLQESQDAIRLAAAS
+ QGFEEHHAFTLDPSTDWGSLFSLCQAMSLFASRQTLALQLPENGPNAAMNEQLATLIG
+ LLHDDLLLIVRGNKLTKAQENAAWYAALADRSVQVSCQTPEQAQLPRWVAARAKAQNL
+ QLDDAANQLLCYCYEGNLLALAQALERLSLLWPDGKLTLPRVEQTVNDAAHFTPFHWV
+ DALLMGKSKRALHILQQLRLEGSEPVILLRTLQRELLLLVNLKRQSAHTPLRALFDKH
+ RIWQNRRPMIGDALQRLHPAQLRQAVQLLTRTEITLKQDYGQSVWAELEGLSLLLCHK
+ ALADVFIDG"
+ misc_feature 2214350..2215351
+ /gene="holA"
+ /locus_tag="SARI_02286"
+ /note="DNA polymerase III subunit delta; Reviewed; Region:
+ holA; PRK05574"
+ /db_xref="CDD:235511"
+ misc_feature 2214407..2214916
+ /gene="holA"
+ /locus_tag="SARI_02286"
+ /note="DNA polymerase III, delta subunit; Region:
+ DNA_pol3_delta; pfam06144"
+ /db_xref="CDD:218910"
+ gene 2215371..2216021
+ /gene="nadD"
+ /locus_tag="SARI_02287"
+ CDS 2215371..2216021
+ /gene="nadD"
+ /locus_tag="SARI_02287"
+ /inference="protein motif:HMMPfam:IPR004820"
+ /inference="protein motif:HMMTigr:IPR004821"
+ /inference="protein motif:HMMTigr:IPR005248"
+ /inference="similar to AA sequence:SwissProt:Q5PM85"
+ /note="transfers an adenyl group from ATP to NaMN to form
+ nicotinic acid adenine dinucleotide (NaAD) which is then
+ converted to the ubiquitous compound NAD by NAD
+ synthetase; essential enzyme in bacteria"
+ /codon_start=1
+ /transl_table=11
+ /product="nicotinic acid mononucleotide
+ adenylyltransferase"
+ /protein_id="YP_001571292.1"
+ /db_xref="GI:161504180"
+ /db_xref="InterPro:IPR004820"
+ /db_xref="InterPro:IPR004821"
+ /db_xref="InterPro:IPR005248"
+ /translation="MGDMKSLQALFGGTFDPVHYGHLKPVETLANLIGLSRVIIMPNN
+ VPPHRPQPEASSAQRKYMLELAIADKPLFTLDERELQRNAPSYTAQTLKAWREEQGPE
+ APLAFIIGQDSLLNFPTWHDYDTILDNTHLIVCRRPGYPLEMTQAQHQQWLEQHLTHT
+ PDDLHQLPAGKIYLAETPWLNISATLIRERLEKGESCDDLLPENVLNYINQQGLYR"
+ misc_feature 2215377..2216018
+ /gene="nadD"
+ /locus_tag="SARI_02287"
+ /note="nicotinic acid mononucleotide adenylyltransferase;
+ Provisional; Region: nadD; PRK00071"
+ /db_xref="CDD:234611"
+ misc_feature 2215395..2216015
+ /gene="nadD"
+ /locus_tag="SARI_02287"
+ /note="Nicotinamide/nicotinate mononucleotide
+ adenylyltransferase; Region: NMNAT; cd02165"
+ /db_xref="CDD:185680"
+ misc_feature order(2215401..2215415,2215425..2215427,2215431..2215436,
+ 2215443..2215445,2215506..2215508,2215626..2215634,
+ 2215689..2215691,2215695..2215700,2215704..2215709,
+ 2215728..2215733,2215776..2215781,2215914..2215916)
+ /gene="nadD"
+ /locus_tag="SARI_02287"
+ /note="active site"
+ /db_xref="CDD:185680"
+ misc_feature 2215425..2215436
+ /gene="nadD"
+ /locus_tag="SARI_02287"
+ /note="(T/H)XGH motif; other site"
+ /db_xref="CDD:185680"
+ gene complement(2215996..2217090)
+ /locus_tag="SARI_02288"
+ CDS complement(2215996..2217090)
+ /locus_tag="SARI_02288"
+ /inference="protein motif:HMMPfam:IPR004839"
+ /inference="protein motif:HMMTigr:IPR005860"
+ /inference="protein motif:ScanRegExp:IPR004838"
+ /inference="similar to AA sequence:REFSEQ:NP_455220.1"
+ /note="'cobalamin biosynthesis protein; decarboxylates
+ L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol
+ O-2-phosphate, the precursor for the linkage between the
+ nucleotide loop and the corrin ring in cobalamin;
+ structurally similar to histidinol phosphate
+ aminotransferase'"
+ /codon_start=1
+ /transl_table=11
+ /product="threonine-phosphate decarboxylase"
+ /protein_id="YP_001571293.1"
+ /db_xref="GI:161504181"
+ /db_xref="InterPro:IPR004838"
+ /db_xref="InterPro:IPR004839"
+ /db_xref="InterPro:IPR005860"
+ /translation="MALFNSAHGGNIREAATVLGISPDQLLDFSANINPLGMPVSVKR
+ ALIDNLDCIERYPDADYFHLRQALARHHQVPASWILAGNGETESIFTVASGLKPRRAM
+ IVTPGFAEYGRALAQIGCEIRRWSLREADGWQLTDAILEALTPDLNCLFLCTPNNPTG
+ LLPERQLLQAIAECCKSLNINLILDEAFIDFIPHEAGFIPALKDNPHIWVLRSLTKFY
+ AIPGLRLGYLVNSDDAAVARMRRQQMPWSVNALAALAGEVALQDSAWQQATWHWLREE
+ GARFYQALCQLPLLTVYPGRANYLLLRCEREDIDLQRRLLTQRILIRSCANYPGLDSR
+ YYRVAIRSTAQNERLLSALRNVLTGITPAD"
+ misc_feature complement(2216011..2217078)
+ /locus_tag="SARI_02288"
+ /note="threonine-phosphate decarboxylase; Provisional;
+ Region: PRK08056"
+ /db_xref="CDD:181212"
+ misc_feature complement(2216029..2217012)
+ /locus_tag="SARI_02288"
+ /note="Aspartate aminotransferase family. This family
+ belongs to pyridoxal phosphate (PLP)-dependent aspartate
+ aminotransferase superfamily (fold I). Pyridoxal phosphate
+ combines with an alpha-amino acid to form a compound
+ called a Schiff base or aldimine...; Region: AAT_like;
+ cd00609"
+ /db_xref="CDD:99734"
+ misc_feature complement(order(2216419..2216421,2216443..2216448,
+ 2216452..2216454,2216527..2216529,2216620..2216622,
+ 2216767..2216769,2216833..2216841))
+ /locus_tag="SARI_02288"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:99734"
+ misc_feature complement(order(2216326..2216328,2216335..2216337,
+ 2216419..2216427,2216548..2216550,2216737..2216739,
+ 2216830..2216832))
+ /locus_tag="SARI_02288"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99734"
+ misc_feature complement(2216443..2216445)
+ /locus_tag="SARI_02288"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:99734"
+ gene 2217175..2217795
+ /locus_tag="SARI_02289"
+ CDS 2217175..2217795
+ /locus_tag="SARI_02289"
+ /inference="protein motif:HMMPfam:IPR013078"
+ /inference="protein motif:ScanRegExp:IPR001345"
+ /inference="similar to AA sequence:REFSEQ:YP_215660.1"
+ /note="'KEGG: sec:SC0673 7.0e-108 cobC; alpha
+ ribazole-5'-P phosphatase in cobalamin synthesis K02226;
+ COG: COG0406 Fructose-2,6-bisphosphatase;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571294.1"
+ /db_xref="GI:161504182"
+ /db_xref="InterPro:IPR001345"
+ /db_xref="InterPro:IPR013078"
+ /translation="MRDTMRLWLVRHGETEANVAGLYSGHAPTPLTEKGIGQAKTLHT
+ LLRHAPFDLVLCSELERARHTARLILEGRDTRQHILPELNEMYFGDWEMRHHRDLTRE
+ DAESYAAWCTDWQNAVPTNGEGFQAFTRRVERFISRLDAFSDCQNLLIVSHQGVLSLL
+ IARLLAMPAASLWHFRVEQGCWSAIDICEGFATLKVLNSRAVWRPE"
+ misc_feature 2217190..2217768
+ /locus_tag="SARI_02289"
+ /note="Histidine phosphatase domain found in
+ phosphoglycerate mutases and related proteins, mostly
+ phosphatases; contains a His residue which is
+ phosphorylated during the reaction; Region: HP_PGM_like;
+ cd07067"
+ /db_xref="CDD:132718"
+ misc_feature order(2217205..2217210,2217355..2217357,2217631..2217636)
+ /locus_tag="SARI_02289"
+ /note="catalytic core [active]"
+ /db_xref="CDD:132718"
+ gene 2218124..2218441
+ /locus_tag="SARI_02290"
+ CDS 2218124..2218441
+ /locus_tag="SARI_02290"
+ /inference="protein motif:HMMPfam:IPR004394"
+ /inference="protein motif:HMMTigr:IPR004394"
+ /inference="similar to AA sequence:REFSEQ:NP_455218.1"
+ /note="'KEGG: bba:Bd3846 5.6e-10 probable
+ nicotinate-nucleotide adenylyltransferase K00969;
+ COG: COG0799 Uncharacterized homolog of plant Iojap
+ protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571295.1"
+ /db_xref="GI:161504183"
+ /db_xref="InterPro:IPR004394"
+ /translation="MQGKALQDFVIDKIDDLKGQDIIALDVQGKSSITDCMIICTGTS
+ SRHVMSIADHVVQSSRAAGMLPLGVEGENAADWIVVDLGDVIVHVMQEESRRLYELEK
+ LWS"
+ misc_feature 2218124..2218438
+ /locus_tag="SARI_02290"
+ /note="ribosome-associated protein; Provisional; Region:
+ PRK11538"
+ /db_xref="CDD:183184"
+ gene 2218445..2218912
+ /locus_tag="SARI_02291"
+ CDS 2218445..2218912
+ /locus_tag="SARI_02291"
+ /inference="protein motif:HMMPfam:IPR003742"
+ /inference="protein motif:HMMTigr:IPR003742"
+ /inference="similar to AA sequence:SwissProt:P67520"
+ /note="SPOUT methyltransferase family protein; crystal
+ structure shows homodimer; in Escherichia coli this
+ protein methylates pseudouridine at position 1915 of the
+ 23S ribosomal RNA"
+ /codon_start=1
+ /transl_table=11
+ /product="rRNA large subunit methyltransferase"
+ /protein_id="YP_001571296.1"
+ /db_xref="GI:161504184"
+ /db_xref="InterPro:IPR003742"
+ /translation="MKLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELIEIPAGKRG
+ KNADIKRILDKEGEQMLAAAGKNRIVTLDIPGKPWDTPQLANELERWKQDGRDVSLLI
+ GGPEGLSPACKAAAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYHRE"
+ misc_feature 2218448..2218906
+ /locus_tag="SARI_02291"
+ /note="rRNA large subunit m3Psi methyltransferase RlmH;
+ Region: tRNA_RlmH_YbeA; TIGR00246"
+ /db_xref="CDD:129349"
+ gene 2218943..2220844
+ /locus_tag="SARI_02292"
+ CDS 2218943..2220844
+ /locus_tag="SARI_02292"
+ /inference="protein motif:HMMPfam:IPR001460"
+ /inference="protein motif:HMMPfam:IPR005311"
+ /inference="protein motif:superfamily:IPR005311"
+ /inference="protein motif:superfamily:IPR012338"
+ /note="'KEGG: eci:UTI89_C0637 0. mrdA; cell elongation, e
+ phase; peptidoglycan synthetase; penicillin-binding
+ protein 2 K05515;
+ COG: COG0768 Cell division protein FtsI/penicillin-binding
+ protein 2;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="penicillin-binding protein 2"
+ /protein_id="YP_001571297.1"
+ /db_xref="GI:161504185"
+ /db_xref="InterPro:IPR001460"
+ /db_xref="InterPro:IPR005311"
+ /db_xref="InterPro:IPR012338"
+ /translation="MKRQNSFRDYTAESALFVRRALVAFLGILLLTGVLIANLYNLQI
+ LRFTDYQTRSNENRIKLVPIAPSRGIIYDRNGIPLALNRTIYQIEMMPEKVDNVQQTL
+ DALRSVVDLNDDDIAAFKKERARSHRFTSIPVKTNLTEVQVARFAVNQYRFPGVEVKG
+ YKRRYYPYGSALTHVIGYVSKINDKDVERLDRENKLANYAATHDIGKLGIERYYEDIL
+ HGQTGYEEVEVNNRGRVIRQLKEVPPQAGHDIYLTLDLKLQQYIETLLAGSRAAVIVT
+ DPRTGGVLSLVSMPSYDPNLFVDGISSKDYSGLLNDPNTPLVNRATQGVYPPASTVKP
+ YVAVSALSAGVITRSTSLFDPGWWQLPGSEKRYRDWKKWGHGHLNVTKSLEESADTFF
+ YQVAYDMGIDRLSEWMGKFGYGHYTGIDLAEERSGNMPTREWKQKRYKKPWYQGDTIP
+ VGIGQGYWTATPIQMSKALMILINDGVVKVPHLLMSTAENGKQVPWVQPHEPPVGDIH
+ SGYWEIAKDGMYGVANRPNGTAHKYFASAPYKIAAKSGTAQVFGLKANETYNAHKIAE
+ RLRDHKLMTAFAPYNNPQVAVAIILENGGAGPAVGTIMRQILDHIMLGDNNTHLPAEN
+ PVVAAAEDQ"
+ misc_feature 2218943..2220841
+ /locus_tag="SARI_02292"
+ /note="penicillin-binding protein 2; Provisional; Region:
+ PRK10795"
+ /db_xref="CDD:236761"
+ misc_feature 2219132..2219659
+ /locus_tag="SARI_02292"
+ /note="Penicillin-binding Protein dimerisation domain;
+ Region: PBP_dimer; pfam03717"
+ /db_xref="CDD:217689"
+ misc_feature 2219753..2220769
+ /locus_tag="SARI_02292"
+ /note="Penicillin binding protein transpeptidase domain;
+ Region: Transpeptidase; pfam00905"
+ /db_xref="CDD:216183"
+ gene 2220847..2221959
+ /locus_tag="SARI_02293"
+ CDS 2220847..2221959
+ /locus_tag="SARI_02293"
+ /inference="protein motif:HMMPfam:IPR001182"
+ /inference="protein motif:HMMTigr:IPR011923"
+ /inference="protein motif:ScanRegExp:IPR001182"
+ /inference="similar to AA sequence:INSD:AAX64575.1"
+ /note="'COG: COG0772 Bacterial cell division membrane
+ protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="cell wall shape-determining protein"
+ /protein_id="YP_001571298.1"
+ /db_xref="GI:161504186"
+ /db_xref="InterPro:IPR001182"
+ /db_xref="InterPro:IPR011923"
+ /translation="MTDNPNKKTFWDKIHIDPTMLLILLALLVYSALVIWSASGQDIG
+ MMERKIGQIAMGLVVMVVMAQIPPRVYEGWAPYLYIICIILLVAVDAFGAISKGAQRW
+ LDLGIVRFQPSEIAKIAVPLMVARFINRDVCPPSLKNTAIALVLIFMPTLLVAAQPDL
+ GTSILVALSGLFVLFLSGLSWRLIGVAIVLIAAFIPILWFFLMHDYQRQRVMMLLDPE
+ TDPLGAGYHIIQSKIAIGSGGLRGKGWLHGTQSQLEFLPERHTDFIFAVLAEELGLVG
+ ILILLALYILLIMRGLWIAARAQTTFGRVMAGGLMLILFVYVFVNIGMVSGILPVVGV
+ PLPLVSYGGSALIVLMAGFGIVMSIHTHRKMLSKSV"
+ misc_feature 2220847..2221956
+ /locus_tag="SARI_02293"
+ /note="cell wall shape-determining protein; Provisional;
+ Region: PRK10794"
+ /db_xref="CDD:182737"
+ gene 2221970..2223058
+ /locus_tag="SARI_02294"
+ CDS 2221970..2223058
+ /locus_tag="SARI_02294"
+ /inference="protein motif:HMMPfam:IPR005132"
+ /inference="protein motif:HMMPfam:IPR007730"
+ /inference="protein motif:HMMTigr:IPR012997"
+ /inference="similar to AA sequence:REFSEQ:YP_151302.1"
+ /note="'KEGG: pfo:Pfl_1900 0.00030 argininosuccinate
+ synthase K03749;
+ COG: COG0797 Lipoproteins;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="rare lipoprotein A"
+ /protein_id="YP_001571299.1"
+ /db_xref="GI:161504187"
+ /db_xref="InterPro:IPR005132"
+ /db_xref="InterPro:IPR007730"
+ /db_xref="InterPro:IPR012997"
+ /translation="MRKQLPVICVAAGIVLLAACTNDGGQQQTTVAPQPAVCHGPIVE
+ ISGAEPRYEPLNPTANQDYQRDGKSYKIVQDPSRFSQAGLAAIYDAEPGSNLTASGEM
+ FDPMQLTAAHPTLPIPSYARITNLANGRMIVVRINDRGPYGTDRVISLSRAAADRLNT
+ SNNTKVRIDPIIVAPDGSLSGPGMACTTVAKQTYALPPRPDLSGGMGSVSSTPAQPQG
+ DVLPVSNSTLKSDDTTGAPVSGSGFLGAPTTLAPGVLEDSEPTPVSAPVSAPAATAPV
+ SAPVSAPAATASGRFVVQVGAVSDQTRAQQYQQRLSQQFSVPGRVMQNGAVWRIQLGP
+ FASKTEASALQQRLQTEAQLQSFIASAQ"
+ misc_feature 2221970..2223055
+ /locus_tag="SARI_02294"
+ /note="rare lipoprotein A; Provisional; Region: PRK10672"
+ /db_xref="CDD:236733"
+ misc_feature 2222207..2222473
+ /locus_tag="SARI_02294"
+ /note="Rare lipoprotein A (RlpA)-like double-psi
+ beta-barrel; Region: DPBB_1; pfam03330"
+ /db_xref="CDD:217497"
+ misc_feature 2222834..2223043
+ /locus_tag="SARI_02294"
+ /note="Sporulation related domain; Region: SPOR;
+ pfam05036"
+ /db_xref="CDD:113793"
+ gene complement(2223029..2223178)
+ /locus_tag="SARI_02295"
+ CDS complement(2223029..2223178)
+ /locus_tag="SARI_02295"
+ /inference="similar to AA sequence:REFSEQ:YP_215654.1"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571300.1"
+ /db_xref="GI:161504188"
+ /translation="MMKLKKVPYYSKSVTGRHPTFRVTLLMSFTEIDSTDACNMLLRA
+ GDKGL"
+ gene 2223198..2224409
+ /locus_tag="SARI_02296"
+ CDS 2223198..2224409
+ /locus_tag="SARI_02296"
+ /inference="protein motif:FPrintScan:IPR001967"
+ /inference="protein motif:HMMPfam:IPR001967"
+ /inference="protein motif:HMMPfam:IPR012907"
+ /inference="protein motif:superfamily:IPR012338"
+ /inference="similar to AA sequence:INSD:CAD05114.1"
+ /note="penicillin-binding protein 5; removes C-terminal
+ D-alanyl residues from sugar-peptide cell wall precursors"
+ /codon_start=1
+ /transl_table=11
+ /product="D-alanyl-D-alanine carboxypeptidase fraction A"
+ /protein_id="YP_001571301.1"
+ /db_xref="GI:161504189"
+ /db_xref="InterPro:IPR001967"
+ /db_xref="InterPro:IPR012338"
+ /db_xref="InterPro:IPR012907"
+ /translation="MKTIFSARFMQRMALTTALCATFISTAHADDLNIKTMIPGVPQI
+ DAESYILIDYNSGKVLAEQNADERRDPASLTKMMTSYVIGQAMKAGKFKETDLVTVGN
+ DAWATGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFAAGSQDAFVG
+ LMNSYVNALGLKNTHFQTVHGLDADGQYSSARDMALIGQALIRDVPNEYAVYKEKEFT
+ FNGIRQLNRNGLLWDNSLNVDGIKTGHTSKAGYNLVASATEGQMRLISAVMGGRTYKG
+ RETESKKLLTWGFRFFETVNPLKAGKEFASEPAWFGNTDRASLGVDKDVYLTIPRGRM
+ KDLKASYVLNTAELHAPLQKNQVVGTINFQLDGKTIEQRPLVVLQEIPEGNFFGKIID
+ YIKLMFHHWFG"
+ misc_feature 2223198..2224406
+ /locus_tag="SARI_02296"
+ /note="D-alanyl-D-alanine carboxypeptidase fraction A;
+ Provisional; Region: PRK10793"
+ /db_xref="CDD:182736"
+ misc_feature 2223258..2224013
+ /locus_tag="SARI_02296"
+ /note="Beta-lactamase enzyme family; Region:
+ Beta-lactamase2; cl17872"
+ /db_xref="CDD:248426"
+ misc_feature 2224071..2224346
+ /locus_tag="SARI_02296"
+ /note="Penicillin-binding protein 5, C-terminal domain;
+ Region: PBP5_C; pfam07943"
+ /db_xref="CDD:203813"
+ gene 2224517..2224780
+ /locus_tag="SARI_02297"
+ CDS 2224517..2224780
+ /locus_tag="SARI_02297"
+ /inference="protein motif:HMMPfam:IPR007454"
+ /inference="similar to AA sequence:INSD:CAD05113.1"
+ /note="'KEGG: dme:Dmel_CG10495 0.0086 CG10495 K05545;
+ COG: COG2921 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571302.1"
+ /db_xref="GI:161504190"
+ /db_xref="InterPro:IPR007454"
+ /translation="MKTKLNELLEFPTPFTYKVMGQALPELVDQVVEVVQRHAPGDYS
+ PTVKPSSKGNYHSVSITINATHIEQVETLYEELGNIDIVRMVL"
+ misc_feature 2224517..2224777
+ /locus_tag="SARI_02297"
+ /note="hypothetical protein; Provisional; Region:
+ PRK04998"
+ /db_xref="CDD:179912"
+ gene 2224834..2225520
+ /gene="lipB"
+ /locus_tag="SARI_02298"
+ CDS 2224834..2225520
+ /gene="lipB"
+ /locus_tag="SARI_02298"
+ /inference="protein motif:BlastProDom:IPR000544"
+ /inference="protein motif:HMMPfam:IPR004143"
+ /inference="protein motif:HMMTigr:IPR000544"
+ /inference="protein motif:ScanRegExp:IPR000544"
+ /inference="similar to AA sequence:SwissProt:Q8ZR03"
+ /note="lipoyl/octanoyltransferase; catalyzes the transfer
+ of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto
+ lipoate-dependent enzymes like pyruvate dehydrogenase and
+ the glycine cleavage system H protein"
+ /codon_start=1
+ /transl_table=11
+ /product="lipoate-protein ligase B"
+ /protein_id="YP_001571303.1"
+ /db_xref="GI:161504191"
+ /db_xref="InterPro:IPR000544"
+ /db_xref="InterPro:IPR004143"
+ /translation="MIYFSLFFILYGDAVLYQDKILVRQLGLQPYEAISQAMHDFTDM
+ RDENSYDEIWLVEHYPVFTQGQAGKAEHILMPGDIPVVQSDRGGQVTYHGPGQQVMYV
+ LLNLKRRKLGVRDLVTLLEQTVVNTLAEIGIEAHPRADAPGVYVGKKKICSLGLRIRR
+ GCSFHGLALNVNMDLSPFLRINPCGYAGMEMAKITQWKEDATTDNIAPRLLANILALL
+ NNPPHEYITA"
+ misc_feature 2224879..2225445
+ /gene="lipB"
+ /locus_tag="SARI_02298"
+ /note="lipoate-protein ligase B; Provisional; Region:
+ PRK14342"
+ /db_xref="CDD:237681"
+ gene 2225821..2226774
+ /locus_tag="SARI_02299"
+ CDS 2225821..2226774
+ /locus_tag="SARI_02299"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="protein motif:HMMPfam:IPR005119"
+ /inference="similar to AA sequence:INSD:AAL19585.1"
+ /note="'COG: COG0583 Transcriptional regulator;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative DNA-binding transcriptional regulator"
+ /protein_id="YP_001571304.1"
+ /db_xref="GI:161504192"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR005119"
+ /translation="MSDNNQTERQPAAQHLQDKPQIFRTLRNIDLNLLTIFEAVYVHK
+ GIVNAAKILNLTPSAISQSIQKLRTIFPDPLFIRKGQGVTPTTYATHLHEYISQGLES
+ ILGALDLTGSYDKQRTITIGTTPSVGALVMPVIYQAIRTRYPQLLLRNIPVDDAESQL
+ SQFQTDLIINTHSYNNRSIQHHVLFSDTLEIVCRQHHPCLASAISEERLNSADHTFLM
+ MEGQNLSLLRLRLQETFPDQQISFSSYNIFTIASLIASSDLLGLMPTRFYTLFSRCWP
+ LERLAYTPVNNEQIEFSLHYNKLSLRDPVLESVIDIIREAF"
+ misc_feature 2225821..2226771
+ /locus_tag="SARI_02299"
+ /note="putative DNA-binding transcriptional regulator;
+ Provisional; Region: PRK11482"
+ /db_xref="CDD:183159"
+ misc_feature 2225911..2226087
+ /locus_tag="SARI_02299"
+ /note="Bacterial regulatory helix-turn-helix protein, lysR
+ family; Region: HTH_1; pfam00126"
+ /db_xref="CDD:215735"
+ misc_feature 2226172..2226768
+ /locus_tag="SARI_02299"
+ /note="The C-terminal substrate binding domain of
+ LysR-type transcriptional regulators that involved in the
+ catabolism of nitroaromatic/naphthalene compounds and that
+ of related regulators; contains the type 2 periplasmic
+ binding fold; Region: PBP2_Nitroaromatics_like; cd08417"
+ /db_xref="CDD:176109"
+ misc_feature order(2226190..2226192,2226196..2226201,2226211..2226213,
+ 2226379..2226381,2226490..2226492,2226694..2226696)
+ /locus_tag="SARI_02299"
+ /note="substrate binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:176109"
+ misc_feature order(2226193..2226195,2226202..2226207,2226214..2226219,
+ 2226226..2226231,2226235..2226240,2226247..2226252,
+ 2226256..2226270,2226274..2226276,2226457..2226459,
+ 2226541..2226555,2226562..2226567,2226574..2226579,
+ 2226586..2226588)
+ /locus_tag="SARI_02299"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:176109"
+ gene 2226980..2227945
+ /locus_tag="SARI_02300"
+ CDS 2226980..2227945
+ /locus_tag="SARI_02300"
+ /inference="protein motif:HMMPanther:IPR003698"
+ /inference="protein motif:HMMPfam:IPR007197"
+ /inference="protein motif:HMMPIR:IPR003698"
+ /inference="protein motif:HMMSmart:IPR006638"
+ /inference="protein motif:HMMTigr:IPR003698"
+ /inference="similar to AA sequence:INSD:AAV77995.1"
+ /note="catalyzes the radical-mediated insertion of two
+ sulfur atoms into an acyl carrier protein (ACP) bound to
+ an octanoyl group to produce a lipoyl group"
+ /codon_start=1
+ /transl_table=11
+ /product="lipoyl synthase"
+ /protein_id="YP_001571305.1"
+ /db_xref="GI:161504193"
+ /db_xref="InterPro:IPR003698"
+ /db_xref="InterPro:IPR006638"
+ /db_xref="InterPro:IPR007197"
+ /translation="MSKPIVMERGVKYRDADKMALIPVKNVITERDALLRKPEWMKIK
+ LPADSTRIQGIKAAMRKNGLHSVCEEASCPNLAECFNHGTATFMILGAICTRRCPFCD
+ VAHGRPVAPDAEEPQKLAQTIADMALRYVVITSVDRDDLRDGGAQHFADCITAIRAKS
+ PEIKIETLVPDFRGRMDRALEILNATPPDVFNHNLENVPRIYRQVRPGADYNWSLKLL
+ ERFKEAHPEIPTKSGLMVGLGETNAEIIEVMRDLRRHGVTMLTLGQYLQPSRHHLPVQ
+ RYVSPEEFDEMKAEALAMGFTHAACGPFVRSSYHADLQAKGMEVK"
+ misc_feature 2227073..2227942
+ /locus_tag="SARI_02300"
+ /note="lipoyl synthase; Provisional; Region: PRK05481"
+ /db_xref="CDD:235493"
+ misc_feature 2227241..2227756
+ /locus_tag="SARI_02300"
+ /note="Radical SAM superfamily. Enzymes of this family
+ generate radicals by combining a 4Fe-4S cluster and
+ S-adenosylmethionine (SAM) in close proximity. They are
+ characterized by a conserved CxxxCxxC motif, which
+ coordinates the conserved iron-sulfur cluster; Region:
+ Radical_SAM; cd01335"
+ /db_xref="CDD:100105"
+ misc_feature order(2227259..2227261,2227265..2227267,2227271..2227273,
+ 2227277..2227282,2227379..2227381,2227385..2227390,
+ 2227484..2227492,2227559..2227561,2227682..2227684)
+ /locus_tag="SARI_02300"
+ /note="FeS/SAM binding site; other site"
+ /db_xref="CDD:100105"
+ gene complement(2228030..2228233)
+ /gene="tatE"
+ /locus_tag="SARI_02301"
+ CDS complement(2228030..2228233)
+ /gene="tatE"
+ /locus_tag="SARI_02301"
+ /inference="protein motif:HMMPfam:IPR003369"
+ /inference="protein motif:HMMTigr:IPR006312"
+ /inference="similar to AA sequence:INSD:AAX64567.1"
+ /note="TatE; similar to TatA and found in some
+ proteobacteria; part of system that translocates proteins
+ with a conserved twin arginine motif across the inner
+ membrane; capable of translocating folded substrates
+ typically those with bound cofactors; similar to a protein
+ import system in thylakoid membranes"
+ /codon_start=1
+ /transl_table=11
+ /product="twin arginine translocase protein E"
+ /protein_id="YP_001571306.1"
+ /db_xref="GI:161504194"
+ /db_xref="InterPro:IPR003369"
+ /db_xref="InterPro:IPR006312"
+ /translation="MGEISITKLLVVAALVVLLFGTKKLRTLGGDLGTAIKGFKKAMN
+ DEDVGVKKDVDGGVQAEKLSHKE"
+ misc_feature complement(2228033..2228233)
+ /gene="tatE"
+ /locus_tag="SARI_02301"
+ /note="twin arginine translocase protein E; Validated;
+ Region: tatE; PRK03625"
+ /db_xref="CDD:179612"
+ gene complement(2228362..2229165)
+ /locus_tag="SARI_02302"
+ CDS complement(2228362..2229165)
+ /locus_tag="SARI_02302"
+ /inference="protein motif:Gene3D:IPR003010"
+ /inference="protein motif:HMMPfam:IPR003010"
+ /inference="protein motif:ScanRegExp:IPR001110"
+ /inference="protein motif:superfamily:IPR003010"
+ /inference="similar to AA sequence:REFSEQ:YP_151309.1"
+ /note="'KEGG: eci:UTI89_C0629 1.2e-98 ybeM; putative
+ amidase K01501;
+ COG: COG0388 Predicted amidohydrolase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571307.1"
+ /db_xref="GI:161504195"
+ /db_xref="InterPro:IPR001110"
+ /db_xref="InterPro:IPR003010"
+ /translation="MGDGDMFVAAGQFIVSPVWENNVQVCVSLMSQAADRGVSLLVLP
+ EGILARDDIDIDLPIRVAQSLDGAFMTRLQEESAHNNMTTIFTILVPSTPGRAVNMLV
+ ALRAGNIVAHYAKLHLYDAFSMQESHTIDAGTVIAPVLDVEGFKVGLMTCYDLRFPEM
+ ALALALQGAEVLVLPAGWVRGPLKELQWSTLLAARALDTTCYMIAAGECGNRNIGQSR
+ IIDPLGVTVAAAADRPALIVAEIFRDRIDQAREQLPLLQQRRFAPPQLL"
+ misc_feature complement(2228365..2229150)
+ /locus_tag="SARI_02302"
+ /note="Predicted amidohydrolase [General function
+ prediction only]; Region: COG0388"
+ /db_xref="CDD:223465"
+ misc_feature complement(2228386..2229144)
+ /locus_tag="SARI_02302"
+ /note="Uncharacterized subgroup of the nitrilase
+ superfamily (putative class 13 nitrilases); Region:
+ nitrilase_3; cd07581"
+ /db_xref="CDD:143605"
+ misc_feature complement(order(2228635..2228637,2228698..2228703,
+ 2228707..2228712,2228788..2228790,2228809..2228811,
+ 2228821..2228823,2229031..2229033))
+ /locus_tag="SARI_02302"
+ /note="putative active site [active]"
+ /db_xref="CDD:143605"
+ misc_feature complement(order(2228710..2228712,2228821..2228823,
+ 2229031..2229033))
+ /locus_tag="SARI_02302"
+ /note="catalytic triad [active]"
+ /db_xref="CDD:143605"
+ misc_feature complement(order(2228386..2228400,2228518..2228523,
+ 2228572..2228577,2228581..2228589,2228593..2228598,
+ 2228677..2228682,2228689..2228703,2228707..2228709,
+ 2228764..2228772,2228791..2228793,2228809..2228820))
+ /locus_tag="SARI_02302"
+ /note="putative dimer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:143605"
+ gene 2229240..2229623
+ /locus_tag="SARI_02303"
+ CDS 2229240..2229623
+ /locus_tag="SARI_02303"
+ /inference="protein motif:HMMPfam:IPR003691"
+ /inference="protein motif:HMMTigr:IPR003691"
+ /inference="similar to AA sequence:INSD:AAO69839.1"
+ /note="may be involved in chromosome condensation;
+ overexpression in Escherichia coli protects against
+ decondensation by camphor; overexpressing the protein
+ results in an increase in supercoiling"
+ /codon_start=1
+ /transl_table=11
+ /product="camphor resistance protein CrcB"
+ /protein_id="YP_001571308.1"
+ /db_xref="GI:161504196"
+ /db_xref="InterPro:IPR003691"
+ /translation="MLQLLLAVFIGGGTGSVARWMLSMRFNPLHQAIPIGTLTANLLG
+ AFIIGMGFAWFNRMTHIDPMWKVLITTGFCGGLTTFSTFSAEVVFLLQEGRFGWALLN
+ VLINLLGSFAMTALAFWLFSAAAAR"
+ misc_feature 2229240..2229581
+ /locus_tag="SARI_02303"
+ /note="chromosome condensation membrane protein;
+ Provisional; Region: PRK14196"
+ /db_xref="CDD:184564"
+ gene complement(2229677..2229886)
+ /gene="cspE"
+ /locus_tag="SARI_02304"
+ CDS complement(2229677..2229886)
+ /gene="cspE"
+ /locus_tag="SARI_02304"
+ /inference="protein motif:BlastProDom:IPR002059"
+ /inference="protein motif:Gene3D:IPR012340"
+ /inference="protein motif:HMMPfam:IPR002059"
+ /inference="protein motif:HMMPIR:IPR012156"
+ /inference="protein motif:HMMSmart:IPR011129"
+ /inference="protein motif:ScanRegExp:IPR002059"
+ /inference="protein motif:superfamily:IPR008994"
+ /inference="similar to AA sequence:INSD:AAC72388.1"
+ /note="member of the CspA family; constitutively expressed
+ RNA/ssDNA-binding protein; functions in helping cells
+ adapt to low temperature; aids nucleic acid melting;
+ participates in gene regulation; can act as a
+ transcription antiterminator"
+ /codon_start=1
+ /transl_table=11
+ /product="cold shock protein CspE"
+ /protein_id="YP_001571309.1"
+ /db_xref="GI:161504197"
+ /db_xref="InterPro:IPR002059"
+ /db_xref="InterPro:IPR008994"
+ /db_xref="InterPro:IPR011129"
+ /db_xref="InterPro:IPR012156"
+ /db_xref="InterPro:IPR012340"
+ /translation="MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTL
+ AEGQRVEFEITNGAKGPSAANVIAL"
+ misc_feature complement(2229689..2229877)
+ /gene="cspE"
+ /locus_tag="SARI_02304"
+ /note="Cold-Shock Protein (CSP) contains an S1-like
+ cold-shock domain (CSD) that is found in eukaryotes,
+ prokaryotes, and archaea. CSP's include the major
+ cold-shock proteins CspA and CspB in bacteria and the
+ eukaryotic gene regulatory factor Y-box...; Region:
+ CSP_CDS; cd04458"
+ /db_xref="CDD:239905"
+ misc_feature complement(order(2229710..2229712,2229797..2229799,
+ 2229830..2229832,2229857..2229859))
+ /gene="cspE"
+ /locus_tag="SARI_02304"
+ /note="DNA-binding site [nucleotide binding]; DNA binding
+ site"
+ /db_xref="CDD:239905"
+ misc_feature complement(order(2229791..2229802,2229821..2229841))
+ /gene="cspE"
+ /locus_tag="SARI_02304"
+ /note="RNA-binding motif; other site"
+ /db_xref="CDD:239905"
+ gene complement(2230074..2230646)
+ /gene="pagP"
+ /locus_tag="SARI_02305"
+ CDS complement(2230074..2230646)
+ /gene="pagP"
+ /locus_tag="SARI_02305"
+ /inference="protein motif:HMMPfam:IPR009746"
+ /inference="similar to AA sequence:REFSEQ:YP_151312.1"
+ /note="catalyzes the transfer of palmitate to lipid A"
+ /codon_start=1
+ /transl_table=11
+ /product="palmitoyl transferase"
+ /protein_id="YP_001571310.1"
+ /db_xref="GI:161504198"
+ /db_xref="InterPro:IPR009746"
+ /translation="MYVVMIIRKHFFIIATLITPWLVLPPVSAMDKGWFNTFTDNVVE
+ TWRQPEHYDLYVPAITWHARFAYDKEKTDRYNERPWGVGFGQSRWDDKGNWHGLYMMA
+ FKDSFNKWEPIGGYGWEKTWRPLEDDHFRLGLGFTAGVTARDNWHYIPVPVLLPLASI
+ GYGSATFQMTYIPGSYNNGNVYFAWMRFQF"
+ misc_feature complement(2230077..2230628)
+ /gene="pagP"
+ /locus_tag="SARI_02305"
+ /note="phospholipid:lipid A palmitoyltransferase;
+ Provisional; Region: pagP; PRK11045"
+ /db_xref="CDD:236829"
+ gene 2231038..2232423
+ /gene="dcuC"
+ /locus_tag="SARI_02306"
+ CDS 2231038..2232423
+ /gene="dcuC"
+ /locus_tag="SARI_02306"
+ /inference="protein motif:HMMPfam:IPR004669"
+ /inference="protein motif:HMMTigr:IPR004669"
+ /inference="similar to AA sequence:INSD:AAO69842.1"
+ /note="responsible for the transport of C4-dicarboxylates
+ during anaerobic growth"
+ /codon_start=1
+ /transl_table=11
+ /product="C4-dicarboxylate transporter DcuC"
+ /protein_id="YP_001571311.1"
+ /db_xref="GI:161504199"
+ /db_xref="InterPro:IPR004669"
+ /translation="MLTVIELLIGVVVIVGVARYIIKGYSATGVLFVGGLVLLIISAL
+ MGHNVLPASETSTGYTATDIVEYIKILLMSRGGDLGMMIMMLCGFAAYMTHIGANDMV
+ VKLASKPLQYINSPYLLMIAAYFVACLMSLAVSSATGLGVLLMATLFPVMVNVGISRG
+ AAAAICASPAAIILSPTSGDVVLAAKAAEMPLIDFAFKTTLPISIAAIIGMAIAHFFW
+ QRYLDKKENISHEMLDVAEITTTAPAFYALLPFTPIFGVLIFDGKWGPQLHIITILVI
+ CMLLAAVLEFMRGFNTQNVFSGLEVAYRGMADAFAGVVMLLVAAGVFAQGLSTIGFIQ
+ SLISIATSFGSASIILMLVLVILTMLAAMTTGSGNAPFYAFVEMIPKLAHSSGINPAY
+ LSIPMLQASNLGRTISPVSGVVVAVAGMAKISPFEVVKRTSVPVMVGLLIVIIATEIM
+ VPGASSAVTGS"
+ misc_feature 2231089..2232402
+ /gene="dcuC"
+ /locus_tag="SARI_02306"
+ /note="C4-dicarboxylate transporter DcuC; Provisional;
+ Region: dcuC; PRK10654"
+ /db_xref="CDD:182621"
+ misc_feature 2231089..2232393
+ /gene="dcuC"
+ /locus_tag="SARI_02306"
+ /note="C4-dicarboxylate anaerobic carrier; Region: DcuC;
+ pfam03606"
+ /db_xref="CDD:217636"
+ gene complement(2232479..2233159)
+ /gene="dpiA"
+ /locus_tag="SARI_02307"
+ CDS complement(2232479..2233159)
+ /gene="dpiA"
+ /locus_tag="SARI_02307"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:HMMPfam:IPR001789"
+ /inference="protein motif:HMMPIR:IPR008247"
+ /inference="protein motif:HMMSmart:IPR001789"
+ /inference="protein motif:superfamily:IPR011006"
+ /inference="similar to AA sequence:REFSEQ:NP_455203.1"
+ /note="regulates the expression of citAB in citrate
+ fermentation"
+ /codon_start=1
+ /transl_table=11
+ /product="two-component response regulator DpiA"
+ /protein_id="YP_001571312.1"
+ /db_xref="GI:161504200"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR008247"
+ /db_xref="InterPro:IPR011006"
+ /translation="MTEPLTLLIVEDETLLAEMHAEYIRHIPGFNQIWLAGNLAQARM
+ MIDRFKPGLILLDNYLPDGKGITLLHELMQSRYPGGVVFTTAASDMETVAEAVRSGAF
+ DYLVKPIAYERLGQTLTRYQQRRRMLASADSASQKQIDEMFNAYARGEPKGDLPTGID
+ ALTLNAVMKLFADPTVRHTAETVAQALTISRTTSRRYLEYCASRHLIVAEILHGKVGR
+ PQRIYHGG"
+ misc_feature complement(2232485..2233159)
+ /gene="dpiA"
+ /locus_tag="SARI_02307"
+ /note="two-component response regulator DpiA; Provisional;
+ Region: dpiA; PRK10046"
+ /db_xref="CDD:182208"
+ misc_feature complement(2232797..2233138)
+ /gene="dpiA"
+ /locus_tag="SARI_02307"
+ /note="Signal receiver domain; originally thought to be
+ unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
+ recently identified in eukaroytes ETR1 Arabidopsis
+ thaliana; this domain receives the signal from the sensor
+ partner in a two-component systems; Region: REC; cd00156"
+ /db_xref="CDD:238088"
+ misc_feature complement(order(2232836..2232841,2232848..2232850,
+ 2232905..2232907,2232965..2232967,2232989..2232991,
+ 2233124..2233129))
+ /gene="dpiA"
+ /locus_tag="SARI_02307"
+ /note="active site"
+ /db_xref="CDD:238088"
+ misc_feature complement(2232989..2232991)
+ /gene="dpiA"
+ /locus_tag="SARI_02307"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238088"
+ misc_feature complement(order(2232965..2232973,2232977..2232982))
+ /gene="dpiA"
+ /locus_tag="SARI_02307"
+ /note="intermolecular recognition site; other site"
+ /db_xref="CDD:238088"
+ misc_feature complement(2232833..2232841)
+ /gene="dpiA"
+ /locus_tag="SARI_02307"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238088"
+ misc_feature complement(2232674..2232760)
+ /gene="dpiA"
+ /locus_tag="SARI_02307"
+ /note="Transcriptional regulator; Region: CitT; pfam12431"
+ /db_xref="CDD:152865"
+ gene complement(2233128..2234789)
+ /locus_tag="SARI_02309"
+ CDS complement(2233128..2234789)
+ /locus_tag="SARI_02309"
+ /inference="protein motif:Gene3D:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003594"
+ /inference="protein motif:HMMSmart:IPR000014"
+ /inference="protein motif:HMMSmart:IPR003594"
+ /inference="similar to AA sequence:INSD:CAD05102.1"
+ /note="'KEGG: stt:t2242 1.1e-283 dpiB; sensor kinase DpiB
+ K07700;
+ COG: COG3290 Signal transduction histidine kinase
+ regulating citrate/malate metabolism;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571313.1"
+ /db_xref="GI:161504202"
+ /db_xref="InterPro:IPR000014"
+ /db_xref="InterPro:IPR003594"
+ /translation="MPYQKNKKLFPFFRQLAFPLRIFLLILVVSVFIVAALAQYFSAS
+ FEDYLASHVRDMAMNQAKIIASNDSIIAAVKKRDYKRLATIANKLQRGTDFDYVVIGD
+ RNSIRLYHPNPKKIGYPMQFTKPGALERGESYFITGKGSIGMAMRAKTPIFDNEGNVI
+ GVVSIGYLVSKIDSWRLDFLLPMAGVFVLLLMVLMLLSWFFAAHIRRQMLGMEPKQIA
+ RVVRQQEALFSSVYEGLIAVDPEGHITAINRNARKMLRLPSPGRQWLGKLIAEVVNPA
+ DFFTCRIAEKRQDVMANFNGLSVIANREAIRSGDELLGAIISFRSKDEIATLNAQLTQ
+ IKQYVESLRTLRHEHLNWMSTLNGLLQMEEYDRVREMVQGESQAQQQLIDSLRGAFAD
+ RQVAGLLFGKVQRAREMGLKMVIVPGSQLHQLPEGLDSTEFAAIVGNLLDNAFEASLR
+ TQEGDNTVELFLSDEGDEVIIEVADQGCGIPEALREKIFEQGVSTRTDEPGEHGIGLY
+ LIASYVGRCGGVITLEDNDPCGTLFSLFLPKVKKNNDRTTNPIDR"
+ misc_feature complement(2233155..2234789)
+ /locus_tag="SARI_02309"
+ /note="sensor histidine kinase DpiB; Provisional; Region:
+ dpiB; PRK15053"
+ /db_xref="CDD:185013"
+ misc_feature complement(<2233893..2234093)
+ /locus_tag="SARI_02309"
+ /note="PAS domain; PAS motifs appear in archaea,
+ eubacteria and eukarya. Probably the most surprising
+ identification of a PAS domain was that in EAG-like
+ K+-channels. PAS domains have been found to bind ligands,
+ and to act as sensors for light and oxygen in...; Region:
+ PAS; cd00130"
+ /db_xref="CDD:238075"
+ misc_feature complement(order(2233965..2233976,2234019..2234021,
+ 2234037..2234039,2234049..2234051))
+ /locus_tag="SARI_02309"
+ /note="putative active site [active]"
+ /db_xref="CDD:238075"
+ misc_feature complement(order(2233929..2233934,2233941..2233943,
+ 2233971..2233973,2233983..2233985))
+ /locus_tag="SARI_02309"
+ /note="heme pocket [chemical binding]; other site"
+ /db_xref="CDD:238075"
+ misc_feature complement(2233179..2233484)
+ /locus_tag="SARI_02309"
+ /note="Histidine kinase-like ATPases; This family includes
+ several ATP-binding proteins for example: histidine
+ kinase, DNA gyrase B, topoisomerases, heat shock protein
+ HSP90, phytochrome-like ATPases and DNA mismatch repair
+ proteins; Region: HATPase_c; cd00075"
+ /db_xref="CDD:238030"
+ misc_feature complement(order(2233191..2233193,2233197..2233202,
+ 2233215..2233217,2233221..2233223,2233269..2233280,
+ 2233350..2233355,2233359..2233361,2233365..2233367,
+ 2233371..2233373,2233452..2233454,2233461..2233463,
+ 2233473..2233475))
+ /locus_tag="SARI_02309"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature complement(2233461..2233463)
+ /locus_tag="SARI_02309"
+ /note="Mg2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature complement(order(2233272..2233274,2233278..2233280,
+ 2233353..2233355,2233359..2233361))
+ /locus_tag="SARI_02309"
+ /note="G-X-G motif; other site"
+ /db_xref="CDD:238030"
+ gene 2234783..2234914
+ /locus_tag="SARI_02308"
+ CDS 2234783..2234914
+ /locus_tag="SARI_02308"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571314.1"
+ /db_xref="GI:161504201"
+ /translation="MALTFLTGISLHTYRKCNKNVLSNLKHIKTDRYRFPTLNQLNN"
+ gene complement(2234799..2234981)
+ /locus_tag="SARI_02310"
+ CDS complement(2234799..2234981)
+ /locus_tag="SARI_02310"
+ /inference="similar to AA sequence:REFSEQ:YP_215641.1"
+ /note="'Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571315.1"
+ /db_xref="GI:161504203"
+ /translation="MVFKCFMVLSFLINLIAILAVGFSCLIDLMWGICNDRFLYASSY
+ LKHFYYICGKYAAKCP"
+ gene 2235174..2236250
+ /locus_tag="SARI_02311"
+ CDS 2235174..2236250
+ /locus_tag="SARI_02311"
+ /inference="protein motif:HMMPfam:IPR000182"
+ /inference="protein motif:HMMPfam:IPR013166"
+ /inference="protein motif:HMMPIR:IPR005216"
+ /inference="protein motif:HMMSmart:IPR013166"
+ /inference="protein motif:HMMTigr:IPR004821"
+ /inference="protein motif:HMMTigr:IPR005216"
+ /inference="similar to AA sequence:REFSEQ:YP_215640.1"
+ /note="'KEGG: stm:STM0624 2.0e-188 citC; citrate lyase
+ synthetase K01910;
+ COG: COG3053 Citrate lyase synthetase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571316.1"
+ /db_xref="GI:161504204"
+ /db_xref="InterPro:IPR000182"
+ /db_xref="InterPro:IPR004821"
+ /db_xref="InterPro:IPR005216"
+ /db_xref="InterPro:IPR013166"
+ /translation="MFGNNVFTRVKRSENKKMAEIAHFLKENDLSVDTTVEVFITVTR
+ HDRLIACGGIAGNIIKCVAISESVRGEGLALTLATELINLAWERHCTHLFIYTKTEYE
+ ALFKQCSFSTIASVPGVMVLMENSATRLKRYAESLATLRHEGKKIGCIVMNANPFTHG
+ HRYLIQQAAAQCDWLHLFLVKEDTSRFPYEDRLDLVLKGTTDIPRLTVHRGSEYIISR
+ ATFPCYFIKEQSVINHCYTEIDLKIFRQYLAPALGITHRFVGTEPFCAVTAQYNRDMR
+ FWLETPTLPAPPIALVEIERLCFQETPISASWVRKLLVKHNLTAIAPLVPDATLRYLQ
+ GMAERHPGSAAARQKSPVLATGEK"
+ misc_feature 2235177..2236229
+ /locus_tag="SARI_02311"
+ /note="Citrate lyase synthetase [Energy production and
+ conversion]; Region: CitC; COG3053"
+ /db_xref="CDD:225595"
+ misc_feature 2235258..2236172
+ /locus_tag="SARI_02311"
+ /note="Citrate lyase ligase; Region: Citrate_lyase_ligase;
+ cd02169"
+ /db_xref="CDD:173920"
+ misc_feature order(2235621..2235635,2235645..2235647,2235654..2235656,
+ 2235711..2235716,2235948..2235953,2235957..2235959,
+ 2236083..2236094,2236101..2236103)
+ /locus_tag="SARI_02311"
+ /note="putative active site [active]"
+ /db_xref="CDD:173920"
+ misc_feature 2235645..2235656
+ /locus_tag="SARI_02311"
+ /note="(T/H)XGH motif; other site"
+ /db_xref="CDD:173920"
+ gene 2236247..2236543
+ /locus_tag="SARI_02312"
+ CDS 2236247..2236543
+ /locus_tag="SARI_02312"
+ /inference="protein motif:BlastProDom:IPR006495"
+ /inference="protein motif:HMMPfam:IPR006495"
+ /inference="protein motif:HMMPIR:IPR006495"
+ /inference="protein motif:HMMTigr:IPR006495"
+ /inference="similar to AA sequence:SwissProt:Q7CQZ6"
+ /note="acyl carrier protein; with CitE and CitF catalyzes
+ the formation of oxaloacetate from citrate"
+ /codon_start=1
+ /transl_table=11
+ /product="citrate lyase subunit gamma"
+ /protein_id="YP_001571317.1"
+ /db_xref="GI:161504205"
+ /db_xref="InterPro:IPR006495"
+ /translation="MKINQLAVAGTLESGDVMIRIAPLDTQDIDLQINSSVEKQFGEA
+ IRATILEVLSRYDVRGVQLNVDDKGALDCILRARLETLLARASGIAALPWEDRQ"
+ misc_feature 2236247..2236540
+ /locus_tag="SARI_02312"
+ /note="Citrate lyase, gamma subunit [Energy production and
+ conversion]; Region: CitD; COG3052"
+ /db_xref="CDD:225594"
+ gene 2236540..2237448
+ /locus_tag="SARI_02313"
+ CDS 2236540..2237448
+ /locus_tag="SARI_02313"
+ /inference="protein motif:HMMPfam:IPR005000"
+ /inference="protein motif:HMMPIR:IPR011206"
+ /inference="protein motif:HMMTigr:IPR006475"
+ /inference="protein motif:superfamily:IPR011076"
+ /inference="similar to AA sequence:INSD:AAL19573.1"
+ /note="'KEGG: stm:STM0622 1.7e-152 citE; citrate lyase
+ beta chain (acyl lyase subunit) K01660:K01644;
+ COG: COG2301 Citrate lyase beta subunit;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571318.1"
+ /db_xref="GI:161504206"
+ /db_xref="InterPro:IPR005000"
+ /db_xref="InterPro:IPR006475"
+ /db_xref="InterPro:IPR011076"
+ /db_xref="InterPro:IPR011206"
+ /translation="MISASLQQRKTRTRRSMLFVPGANAAMVSNSFIYPADALMFDLE
+ DSVALREKDAARRLVYHALQHPLYRDVETIVRVNALDSEWGVNDLEAVVRGGANVVRL
+ PKTDTAQDVIDIENEILRIENACGREPGSTGLLAAVESPLGITRAVEIAHASERLIGI
+ ALGAEDYVRNLRTERSPEGTELLFARCAILQAARSAGIQAFDTVYSDANNEAGFLQEA
+ AHIKQLGFDGKSLINPRQIELLHNLYAPTRKEVAHARLVVEAAEAAAREGLGVVSLNG
+ KMVDSPVIERARLVLSRAELSGIREE"
+ misc_feature 2236573..2237436
+ /locus_tag="SARI_02313"
+ /note="HpcH/HpaI aldolase/citrate lyase family; Region:
+ HpcH_HpaI; cl17231"
+ /db_xref="CDD:247785"
+ gene 2237458..2238987
+ /locus_tag="SARI_02314"
+ CDS 2237458..2238987
+ /locus_tag="SARI_02314"
+ /inference="protein motif:HMMPfam:IPR006472"
+ /inference="protein motif:HMMPIR:IPR006472"
+ /inference="protein motif:HMMTigr:IPR006472"
+ /inference="similar to AA sequence:REFSEQ:NP_459613.1"
+ /note="'KEGG: stm:STM0621 5.6e-257 citF; bifunctional
+ citrate lyase alpha chain/citrate-ACP transferase
+ K01037:K01643;
+ COG: COG3051 Citrate lyase, alpha subunit;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571319.1"
+ /db_xref="GI:161504207"
+ /db_xref="InterPro:IPR006472"
+ /translation="MTQKNESQRQDRVAAWSRHAESKLSAYQSAAKLNLQAQKPRDHK
+ LCASLEEAIRRSGLRDGMTISFHHAFRGGDLTINLVMETIAKMGFKNLTLASSSLSDC
+ HAPLVEHIRNGVVCRIYTSGLRGPLAEEISRGLLAEPVQIHSHGGRVHLVQSGELNID
+ VAFLGVPSCDEFGNANGYTGKACCGSLGYARVDAENAQQVVLLTEQLLPYPHNPASIA
+ QDQVDHIVLVDQVGDADKIGADATRMTTNPRELLIARSAAEVIANSGYFNEGFSLQTG
+ TGGASLAVTRFLEDKMRSRDIHADFALGGITATIVDLHEKGLIHKLLDVQSFDRNAAE
+ SLARNPNHIEISANQYANWGSKGASVDRLDVVVLSALEVDTHFNVNVLTGSDGVLRGA
+ SGGHCDTAVAAALSIIVAPLVRGRIPTLVDNVTTCVTPGSSVDILVTDHGIAVNPARP
+ ELAERLKAAGMKVVSIEWLRERAQLLTGQPRPIEFTDRVIAVVRYRDGSVIDVVHQVK
+ E"
+ misc_feature 2237458..2238984
+ /locus_tag="SARI_02314"
+ /note="Citrate lyase, alpha subunit [Energy production and
+ conversion]; Region: CitF; COG3051"
+ /db_xref="CDD:225593"
+ misc_feature <2238550..2238789
+ /locus_tag="SARI_02314"
+ /note="Acetyl-CoA hydrolase/transferase C-terminal domain;
+ Region: AcetylCoA_hyd_C; pfam13336"
+ /db_xref="CDD:205516"
+ gene 2238991..2239542
+ /gene="citX"
+ /locus_tag="SARI_02315"
+ CDS 2238991..2239542
+ /gene="citX"
+ /locus_tag="SARI_02315"
+ /inference="protein motif:HMMPfam:IPR005551"
+ /inference="similar to AA sequence:REFSEQ:NP_459612.1"
+ /note="2'-(5''-phosphoribosyl)-3'-dephospho-CoA
+ transferase; holo-citrate lyase synthase; CitG forms the
+ prosthetic group precursor
+ 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA which is then
+ transferred to apo-ACP by CitX to produce holo-ACP and
+ pyrophosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="2'-(5''-triphosphoribosyl)-3'-dephospho-CoA:apo-
+ citrate lyase"
+ /protein_id="YP_001571320.1"
+ /db_xref="GI:161504208"
+ /db_xref="InterPro:IPR005551"
+ /translation="MRLLPELAACHDVSIPELLASRDERQARQRAWLTRHATPLVSFT
+ VVAPGPMKDSALTRRIFNHGVTALHTLAEEYGWTIREQAALASASGPEGLLAIDAPAQ
+ ALKQATIALEQRYPLGRLWDIDVLTAEGEILSRRHFALPARRCLLCGQSAAECARGKT
+ HALSDLLIHMEALLHDVDSRQPD"
+ misc_feature 2238991..2239539
+ /gene="citX"
+ /locus_tag="SARI_02315"
+ /note="Phosphoribosyl-dephospho-CoA transferase (holo-ACP
+ synthetase) [Coenzyme metabolism / Lipid metabolism];
+ Region: CitX; COG3697"
+ /db_xref="CDD:226221"
+ gene 2239514..2240410
+ /gene="citG"
+ /locus_tag="SARI_02316"
+ CDS 2239514..2240410
+ /gene="citG"
+ /locus_tag="SARI_02316"
+ /inference="protein motif:HMMPfam:IPR002736"
+ /inference="similar to AA sequence:INSD:AAX64554.1"
+ /note="catalyzes the formation of
+ 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA from ATP and
+ 3-dephospho-CoA"
+ /codon_start=1
+ /transl_table=11
+ /product="triphosphoribosyl-dephospho-CoA synthase"
+ /protein_id="YP_001571321.1"
+ /db_xref="GI:161504209"
+ /db_xref="InterPro:IPR002736"
+ /translation="MMSIPVNPTNASIQPQSLYDAWADLAWRAMLTEVNLSPKPGLVD
+ RLNCGAHKDMALEDFHRSAEAIRDWLPRFMEYGASCTRLPPESVLAGLRPLGMACEAA
+ MFRATAGVNTHKGSIFSLGLLCAAIGRLYQLRQPITAQTLCATSAAFCRGLTARELRQ
+ NNLQLTAGQRLYQQLGLTGARGEAEAGYPLVIRHALPHYRALLAQGRDPELALLDTLL
+ LLMSLNGDTNVASRGGSDGLRWLQQHASFLLRQGGIRTPDDLVYLHQFNQQCIERNLS
+ PGGSADLLIVTWFLAQISQVNH"
+ misc_feature 2239517..2240392
+ /gene="citG"
+ /locus_tag="SARI_02316"
+ /note="triphosphoribosyl-dephospho-CoA synthase;
+ Provisional; Region: citG; PRK10096"
+ /db_xref="CDD:182239"
+ gene 2240448..2241911
+ /locus_tag="SARI_02317"
+ CDS 2240448..2241911
+ /locus_tag="SARI_02317"
+ /inference="protein motif:HMMPfam:IPR001898"
+ /inference="protein motif:HMMTigr:IPR001898"
+ /inference="similar to AA sequence:REFSEQ:NP_805991.1"
+ /note="'COG: COG0471 Di- and tricarboxylate transporters;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571322.1"
+ /db_xref="GI:161504210"
+ /db_xref="InterPro:IPR001898"
+ /translation="MSLSKDNIWKLLAPLVVMGVMFLIPVPDGMPPQAWHYFAVFVAM
+ IVGMILEPIPATAISFIAVTICVIGSNYLLFDASELADPAFKASKQALKWGLAGFSST
+ TVWLVFGAFIFALGYEVTGLGRRIALFLVKFMGKRTLTLGYAIVIIDILLAPFTPSNT
+ ARTGGTVFPVIKNLPPLFKSFPNDPSARRIGGYLMWMMVISTSLSSSMFVTGAAPNVL
+ GLEFVSKIAGVQISWLQWFLSFLPVGIILLIVAPWLSYVLYKPEVTHSAEVAAWAGDE
+ LKSMGRLSRKEWTLIGLVLLSLGLWVFGGKIINATAVGLLAVSLMLALHVVPWKDITR
+ YNSAWNTLVNLATLVVMANGLTRSGFIDWFANTMSTHLEGFSPDATVIVLVLVFYFAH
+ YLFASLSAHTATMLPVILAVGKGIPGVPMEQLCILLVLSIGIMGCLTPYATGPGVIIY
+ GCGYVKSRDYWRLGAIFGVIYIAMLLLVGWPILAMWN"
+ misc_feature 2240469..2241902
+ /locus_tag="SARI_02317"
+ /note="Di- and tricarboxylate transporters [Inorganic ion
+ transport and metabolism]; Region: CitT; COG0471"
+ /db_xref="CDD:223547"
+ misc_feature 2240721..2241896
+ /locus_tag="SARI_02317"
+ /note="Anion permease ArsB/NhaD. These permeases have
+ been shown to translocate sodium, arsenate, antimonite,
+ sulfate and organic anions across biological membranes in
+ all three kingdoms of life. A typical anion permease
+ contains 8-13 transmembrane helices...; Region:
+ ArsB_NhaD_permease; cd00625"
+ /db_xref="CDD:238344"
+ misc_feature order(2240748..2240801,2240868..2240912,2240919..2240924,
+ 2240928..2240981,2240994..2240996,2241024..2241092,
+ 2241168..2241200,2241204..2241215,2241309..2241347,
+ 2241369..2241401,2241405..2241416,2241456..2241512,
+ 2241582..2241620,2241627..2241635,2241720..2241779,
+ 2241852..2241890)
+ /locus_tag="SARI_02317"
+ /note="transmembrane helices; other site"
+ /db_xref="CDD:238344"
+ gene 2242021..2242827
+ /locus_tag="SARI_02318"
+ CDS 2242021..2242827
+ /locus_tag="SARI_02318"
+ /inference="protein motif:Gene3D:IPR001568"
+ /inference="protein motif:ScanRegExp:IPR001568"
+ /inference="similar to AA sequence:INSD:AAO69852.1"
+ /note="'KEGG: stt:t2250 1.2e-133 rna; ribonuclease I
+ precursor K01169;
+ COG: COG3719 Ribonuclease I;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="ribonuclease I"
+ /protein_id="YP_001571323.1"
+ /db_xref="GI:161504211"
+ /db_xref="InterPro:IPR001568"
+ /translation="MRAIGSYSPLLAVLLTPFFAASANDLQAQQYGDFTDYVLALSWQ
+ TGFCQSQHERHHREPDECRLQKEPVNKADFLTVHGLWPGLPKSIAASGVDQRRWQRFG
+ CATRPIPNLPEVRASRKCSAPDPGLSPDIAVMLREVMPGAGGNSCLERYEYAKHGACF
+ GFDPNAYFGTMIRLDKAIKGSALGHFLADNYGKTVSRAAFNSVVEQMWGKDNVKAVKV
+ NCHGNPAYLTEIQFSLKASMINAPLSSASFLPQPHPGNCGTQFIIDKAGY"
+ misc_feature 2242120..2242800
+ /locus_tag="SARI_02318"
+ /note="Ribonuclease T2 (RNase T2) is a widespread family
+ of secreted RNases found in every organism examined thus
+ far. This family includes RNase Rh, RNase MC1, RNase LE,
+ and self-incompatibility RNases (S-RNases). Plant T2
+ RNases are expressed during leaf...; Region:
+ RNase_T2_prok; cd01062"
+ /db_xref="CDD:238513"
+ misc_feature order(2242132..2242134,2242261..2242263,2242711..2242713)
+ /locus_tag="SARI_02318"
+ /note="B1 nucleotide binding pocket [chemical binding];
+ other site"
+ /db_xref="CDD:238513"
+ misc_feature order(2242144..2242146,2242159..2242161,2242462..2242464,
+ 2242705..2242707)
+ /locus_tag="SARI_02318"
+ /note="B2 nucleotide binding pocket [chemical binding];
+ other site"
+ /db_xref="CDD:238513"
+ misc_feature order(2242243..2242266,2242462..2242497)
+ /locus_tag="SARI_02318"
+ /note="CAS motifs; other site"
+ /db_xref="CDD:238513"
+ misc_feature order(2242252..2242254,2242261..2242263,2242267..2242269,
+ 2242471..2242476,2242483..2242488)
+ /locus_tag="SARI_02318"
+ /note="active site"
+ /db_xref="CDD:238513"
+ gene 2243062..2243472
+ /locus_tag="SARI_02319"
+ CDS 2243062..2243472
+ /locus_tag="SARI_02319"
+ /inference="protein motif:BlastProDom:IPR001437"
+ /inference="protein motif:Gene3D:IPR001437"
+ /inference="protein motif:HMMPfam:IPR001437"
+ /inference="similar to AA sequence:REFSEQ:YP_151323.1"
+ /note="'Regulates the synthesis of nucleoside
+ triphosphates for nucleic acid synthesis, CTP for lipid
+ synthesis, and GTP for protein elongation'"
+ /codon_start=1
+ /transl_table=11
+ /product="nucleoside diphosphate kinase regulator"
+ /protein_id="YP_001571324.1"
+ /db_xref="GI:161504212"
+ /db_xref="InterPro:IPR001437"
+ /translation="MSRPTIIINDLDAERIDRLLEQPAYADLPIADALNAELDRAQMC
+ SPQEMPSDVVTMNSRVKFRNLSDGETRVRTLVYPANMTDSSTQLSVMAPVGAALLGLR
+ VGDTIHWELPGGASTHLEVLELEYQPEAAGDFLR"
+ misc_feature 2243062..2243469
+ /locus_tag="SARI_02319"
+ /note="nucleoside diphosphate kinase regulator;
+ Provisional; Region: PRK05753"
+ /db_xref="CDD:180236"
+ misc_feature 2243206..2243439
+ /locus_tag="SARI_02319"
+ /note="Transcription elongation factor, GreA/GreB, C-term;
+ Region: GreA_GreB; pfam01272"
+ /db_xref="CDD:201702"
+ gene complement(2243557..2244795)
+ /locus_tag="SARI_02320"
+ CDS complement(2243557..2244795)
+ /locus_tag="SARI_02320"
+ /inference="protein motif:HMMPanther:IPR002085"
+ /inference="protein motif:HMMPfam:IPR013149"
+ /inference="protein motif:HMMPfam:IPR013154"
+ /inference="protein motif:superfamily:IPR011032"
+ /inference="similar to AA sequence:INSD:AAL19566.1"
+ /note="'KEGG: psp:PSPPH_3469 2.2e-134 fdh;
+ glutaTHIone-dependent formaldehyde dehydrogenase;
+ COG: COG1063 Threonine dehydrogenase and related
+ Zn-dependent dehydrogenases;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="alcohol dehydrogenase"
+ /protein_id="YP_001571325.2"
+ /db_xref="GI:448236256"
+ /db_xref="InterPro:IPR002085"
+ /db_xref="InterPro:IPR011032"
+ /db_xref="InterPro:IPR013149"
+ /db_xref="InterPro:IPR013154"
+ /translation="MKALTYHGPHHVKVENVPDPGIEQPDDIILRVTATAICGSDLHL
+ YRGKIPQVKHGDIFGHEFMGEVVETGHDVKNIQKGDRVVIPFVIACGDCFFCRLQQYS
+ ACENTNDGHGAAMNKKQIPPPAALFGYSHLYGGVPGGQAEYVRVPKGNVGPFKVPPLL
+ SDDKALFLSDILPTAWQAAKNAQIQQGSSVAVFGAGPVGLLTIACARLLGAEQIFVVD
+ HHPWRLRFAEERYGAIPINFDDENDPAEKIIEQTAGHRGVDAVIDAVGFEAKGSMTET
+ VLTNLKLEGSSGKALRQCIAAVRRGGVVSVPGVYAGFIHGFLFGDAFDKGLTFKMGQT
+ HVHAWLGELLPLIEKGLLKPEEIVTHYMPFEEAARGYEIFEKREEECRKVILVPGATS
+ AQAAQKQATGVINPMPGGVV"
+ misc_feature complement(2243632..2244795)
+ /locus_tag="SARI_02320"
+ /note="Glutathione-dependent formaldehyde dehydrogenase
+ related proteins, child 1; Region: FDH_like_1; cd08283"
+ /db_xref="CDD:176243"
+ misc_feature complement(2243632..2244795)
+ /locus_tag="SARI_02320"
+ /note="Threonine dehydrogenase and related Zn-dependent
+ dehydrogenases [Amino acid transport and metabolism /
+ General function prediction only]; Region: Tdh; COG1063"
+ /db_xref="CDD:223991"
+ misc_feature complement(order(2243674..2243676,2243794..2243802,
+ 2243869..2243877,2243926..2243928,2243998..2244006,
+ 2244082..2244084,2244127..2244129,2244139..2244147,
+ 2244202..2244210,2244214..2244219,2244274..2244276,
+ 2244286..2244288,2244538..2244540,2244667..2244669,
+ 2244676..2244684))
+ /locus_tag="SARI_02320"
+ /note="NAD binding site [chemical binding]; other site"
+ /db_xref="CDD:176243"
+ misc_feature complement(order(2244286..2244288,2244616..2244618,
+ 2244676..2244678,2244682..2244684))
+ /locus_tag="SARI_02320"
+ /note="catalytic Zn binding site [ion binding]; other
+ site"
+ /db_xref="CDD:176243"
+ misc_feature complement(order(2244484..2244486,2244508..2244510,
+ 2244517..2244519,2244523..2244528))
+ /locus_tag="SARI_02320"
+ /note="structural Zn binding site [ion binding]; other
+ site"
+ /db_xref="CDD:176243"
+ gene 2244616..2244915
+ /locus_tag="SARI_02321"
+ CDS 2244616..2244915
+ /locus_tag="SARI_02321"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571326.1"
+ /db_xref="GI:161504214"
+ /translation="MAENIAMFYLWDLAAIEMQIRAANRGGGNTQNDIVRLLNAGIGY
+ VFNLYVMWTVIRQCFHAASGVTVNVAFDYKRVAIPERLPAKQAALGFFLENTTLF"
+ gene 2245018..2245446
+ /locus_tag="SARI_02322"
+ CDS 2245018..2245446
+ /locus_tag="SARI_02322"
+ /inference="protein motif:Gene3D:IPR006016"
+ /inference="protein motif:HMMPfam:IPR006016"
+ /inference="similar to AA sequence:INSD:CAD05091.1"
+ /note="'COG: COG0589 Universal stress protein UspA and
+ related nucleotide-binding proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571327.1"
+ /db_xref="GI:161504215"
+ /db_xref="InterPro:IPR006016"
+ /translation="MYKTIIMPVDVFEMELSDKAIRHAEFLAQQDGVIHLLHVLPGSA
+ SMSLHRFAADVRRFEEHLQHEAETRLQTMVGHFTIDPSRIKQHVRFGSVRDAVNELAE
+ ELDADVVVIGSRNPSIATHLLGSNASSVVRHATLPVLVVR"
+ misc_feature 2245060..2245440
+ /locus_tag="SARI_02322"
+ /note="Usp: Universal stress protein family. The universal
+ stress protein Usp is a small cytoplasmic bacterial
+ protein whose expression is enhanced when the cell is
+ exposed to stress agents. Usp enhances the rate of cell
+ survival during prolonged exposure to...; Region:
+ USP_Like; cd00293"
+ /db_xref="CDD:238182"
+ misc_feature order(2245132..2245134,2245348..2245353,2245357..2245362,
+ 2245387..2245398)
+ /locus_tag="SARI_02322"
+ /note="Ligand Binding Site [chemical binding]; other site"
+ /db_xref="CDD:238182"
+ gene complement(2245514..2246281)
+ /locus_tag="SARI_02323"
+ CDS complement(2245514..2246281)
+ /locus_tag="SARI_02323"
+ /inference="protein motif:HMMPfam:IPR007059"
+ /inference="similar to AA sequence:REFSEQ:NP_455190.1"
+ /note="'KEGG: dsy:DSY0599 3.6e-17 dmsC; putative anaerobic
+ DMSO reductase chain C anchor subunit K00369;
+ COG: COG3302 DMSO reductase anchor subunit;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571328.1"
+ /db_xref="GI:161504216"
+ /db_xref="InterPro:IPR007059"
+ /translation="MEKYELPLVFFTVLSQMSVGMALVLTWRTLRGEVEGLRFYWLAT
+ GLVLALASIAAILHLAHPDRAYNALINLQHAWLSREILGATLFGAAVGVTFLAKGHKA
+ MAIIASVFGVILVAVQGMTYAAPAMVAIANGFTMLLFFITVWVMGCAATPLLKLRPAV
+ PALRQGIVVCIAVLIAAPLVWLSGGTVMQMTAHSWLASPFYLASLICLALAFVASRHG
+ DSRPKVLFVLLFVGVFLSRLVFFGDTVSTIVNIGHLY"
+ misc_feature complement(2245616..2246278)
+ /locus_tag="SARI_02323"
+ /note="DMSO reductase anchor subunit [General function
+ prediction only]; Region: DmsC; COG3302"
+ /db_xref="CDD:225839"
+ gene complement(2246281..2246838)
+ /locus_tag="SARI_02324"
+ CDS complement(2246281..2246838)
+ /locus_tag="SARI_02324"
+ /inference="protein motif:HMMPfam:IPR001450"
+ /inference="protein motif:ScanRegExp:IPR001450"
+ /inference="similar to AA sequence:REFSEQ:YP_151326.1"
+ /note="'KEGG: dsy:DSY0598 3.7e-47 dmsB; putative anaerobic
+ DMSO reductase chain B iron-sulfur subunit K00369;
+ COG: COG0437 Fe-S-cluster-containing hydrogenase
+ components 1;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571329.1"
+ /db_xref="GI:161504217"
+ /db_xref="InterPro:IPR001450"
+ /translation="MRRAFLVNSDKCIGCRGCAMACKSFNQLEPDRFWRYVYPLDKDI
+ YPHEERAFYSLACNHCEHPACVAACPVEAYTKREDGVVVHNPERCIGCKNCIRNCPYG
+ APRFNEETRKAEKCSMCYERLDIGMNPACVNACPVGALSIIDLDDDPVPDTAVQYPPG
+ FPHMPQLNPGTRFILARQPKQPEDK"
+ misc_feature complement(2246290..2246838)
+ /locus_tag="SARI_02324"
+ /note="Fe-S-cluster-containing hydrogenase components 1
+ [Energy production and conversion]; Region: HybA; COG0437"
+ /db_xref="CDD:223514"
+ misc_feature complement(2246398..>2246595)
+ /locus_tag="SARI_02324"
+ /note="RPB11 and RPB3 subunits of RNA polymerase; Region:
+ RNAP_RPB11_RPB3; cl11409"
+ /db_xref="CDD:245605"
+ gene complement(2246835..2249063)
+ /locus_tag="SARI_02325"
+ CDS complement(2246835..2249063)
+ /locus_tag="SARI_02325"
+ /inference="protein motif:HMMPfam:IPR006656"
+ /inference="protein motif:HMMPfam:IPR006657"
+ /inference="protein motif:ScanRegExp:IPR006655"
+ /inference="protein motif:superfamily:IPR009010"
+ /note="'KEGG: dsy:DSY0597 3.5e-184 dmsA; putative
+ anaerobic DMSO reductase chain A precursor K00369;
+ COG: COG0243 Anaerobic dehydrogenases, typically
+ selenocysteine-containing;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="molybdopterin-containing oxidoreductase
+ catalytic subunit"
+ /protein_id="YP_001571330.2"
+ /db_xref="GI:448236257"
+ /db_xref="InterPro:IPR006655"
+ /db_xref="InterPro:IPR006656"
+ /db_xref="InterPro:IPR006657"
+ /db_xref="InterPro:IPR009010"
+ /translation="MALGAVAALPGGLLTSRCALAQPPVPFNPKTYKIYRNACPRNCY
+ DTCSLKTWVKDGVITFVEGAPESTFTHGTPCVKGLSYPRRVYSPDRIKYPMAQDVRGS
+ GNWRRISWEEAMQRIAAKMLEIKKKDGSMLGLALTKYSGKFGVLNYAVEGMMSSLGYT
+ TRFAGTPCWPAGIDAQNYDMGDMWCNDPEDMVKAKYIIIWGANPAWCSMHSMKYIYQA
+ REQGAKVVVIDPLLSQTAAKADLYLRVRPGSDGALALGMARHLVDKGLVDQDFVNNDA
+ HGYPEFEAYLRNHVTVEWAAEICGLSADVIRQLAEEFTAVKPATVWIGYGMQRHVNGG
+ ANVRAIDAFVAMSGNIGVEGGGARYGHLHTWGFNYNAMLQKPPAGSVGMRGAAGTTSE
+ FGAAAGSDAVQYSDRSLNINQTAQGILEANDPPVRMLWVACKNPFAQDFDRGKMKKAF
+ EKLEMVVCADQFFNETVQHADIVLPVTTAFEEWNVDASYWHYWLSINQPAIKPMYEAK
+ CDLEIATMLSRTINKMAPGSCTFPQEFDHKRWLDQEFNNGMAKMFGISSWDDLLDGPK
+ KAILPSSAAWYDRKFKTPSGKYEFKSELAEKNGHTALPAYKPEAESKLPFHLFTPHVQ
+ FGLHSQFINLDWMQVFYPEPFVYLHPSSAQKKGISENDLVKVFNGTGEVELRAKVTTN
+ VPEDFLVMYEAWFPKRQYNVQNVVADTPADMGLMKTGAPGAAIHSQFADIVLIGKGES
+ VA"
+ misc_feature complement(2246922..2249021)
+ /locus_tag="SARI_02325"
+ /note="Anaerobic dehydrogenases, typically
+ selenocysteine-containing [Energy production and
+ conversion]; Region: BisC; COG0243"
+ /db_xref="CDD:223321"
+ misc_feature complement(2247252..2248958)
+ /locus_tag="SARI_02325"
+ /note="The MopB_3 CD includes a group of related
+ uncharacterized bacterial and archaeal
+ molybdopterin-binding oxidoreductase-like domains with a
+ putative N-terminal iron-sulfur [4Fe-4S] cluster binding
+ site and molybdopterin cofactor binding site. These
+ members...; Region: MopB_3; cd02766"
+ /db_xref="CDD:239167"
+ misc_feature complement(order(2248839..2248841,2248923..2248925,
+ 2248935..2248937,2248947..2248949))
+ /locus_tag="SARI_02325"
+ /note="putative [4Fe-4S] binding site [ion binding]; other
+ site"
+ /db_xref="CDD:239167"
+ misc_feature complement(order(2247618..2247620,2247633..2247638,
+ 2247672..2247674,2247681..2247689,2247759..2247767,
+ 2247888..2247893,2248083..2248094,2248314..2248316,
+ 2248374..2248382,2248443..2248448,2248455..2248457,
+ 2248461..2248466,2248557..2248565,2248569..2248571,
+ 2248833..2248835))
+ /locus_tag="SARI_02325"
+ /note="putative molybdopterin cofactor binding site
+ [chemical binding]; other site"
+ /db_xref="CDD:239167"
+ misc_feature complement(2246922..2247203)
+ /locus_tag="SARI_02325"
+ /note="Molybdopterin-Binding, C-terminal (MopB_CT) domain
+ of the MopB superfamily of proteins, a large, diverse,
+ heterogeneous superfamily of enzymes that, in general,
+ bind molybdopterin as a cofactor. The MopB domain is found
+ in a wide variety of molybdenum-...; Region: MopB_CT;
+ cd02775"
+ /db_xref="CDD:239176"
+ misc_feature complement(order(2246955..2246957,2246988..2246990,
+ 2247177..2247182,2247189..2247194,2247198..2247203))
+ /locus_tag="SARI_02325"
+ /note="molybdopterin cofactor binding site; other site"
+ /db_xref="CDD:239176"
+ gene complement(2249107..2249667)
+ /locus_tag="SARI_02326"
+ CDS complement(2249107..2249667)
+ /locus_tag="SARI_02326"
+ /inference="protein motif:HMMPfam:IPR010395"
+ /inference="similar to AA sequence:REFSEQ:NP_459602.1"
+ /note="'KEGG: vfi:VFA0083 3.4e-12 ynfI; anaerobic dimethyl
+ sulfoxide reductase chain YnfI K00397;
+ COG: COG3381 Uncharacterized component of anaerobic
+ dehydrogenases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571331.1"
+ /db_xref="GI:161504219"
+ /db_xref="InterPro:IPR010395"
+ /translation="MGSIYETLTELEKTGLILRDFFNSYDGRSLKSAYVRLNPTAAVN
+ LTDRAWLEAEYDFNALFVGPGKLLAAPFASVYLDDDALVMGKATLEIRDFMATLGLSV
+ EQDSNIPDDHISCVLELTTLLLVNSRQASQYRRTLTQYINNYLTKWVPLYIEKIKTHA
+ QTTTLYTVADILFYWLDELKREYEYE"
+ misc_feature complement(2249110..2249667)
+ /locus_tag="SARI_02326"
+ /note="Uncharacterized component of anaerobic
+ dehydrogenases [General function prediction only]; Region:
+ TorD; COG3381"
+ /db_xref="CDD:225916"
+ gene complement(2250008..2251573)
+ /locus_tag="SARI_02327"
+ CDS complement(2250008..2251573)
+ /locus_tag="SARI_02327"
+ /inference="protein motif:BlastProDom:IPR001327"
+ /inference="protein motif:Gene3D:IPR012335"
+ /inference="protein motif:HMMPfam:IPR001327"
+ /inference="protein motif:HMMPfam:IPR013027"
+ /inference="protein motif:HMMPIR:IPR012081"
+ /inference="protein motif:ScanRegExp:IPR008255"
+ /inference="protein motif:superfamily:IPR012336"
+ /inference="similar to AA sequence:INSD:AAX64546.1"
+ /note="'KEGG: stm:STM0609 2.5e-270 ahpF; alkyl
+ hydroperoxide reductase, F52a subunit; detoxification of
+ hydroperoxides K03387;
+ COG: COG3634 Alkyl hydroperoxide reductase, large subunit;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571332.1"
+ /db_xref="GI:161504220"
+ /db_xref="InterPro:IPR001327"
+ /db_xref="InterPro:IPR008255"
+ /db_xref="InterPro:IPR012081"
+ /db_xref="InterPro:IPR012335"
+ /db_xref="InterPro:IPR012336"
+ /db_xref="InterPro:IPR013027"
+ /translation="MLDMNMKTQLKAYLEKLTKPVELIATLDDSAKSAEIKELLAEIA
+ ELSDKVTFKEDNTLPVRKPSFLITNPGSQQGPRFAGSPLGHEFTSLVLALLWTGGHPS
+ KEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNSRIKHTAIDGGTFQ
+ NEITERNVMGVPAVFVNGKEFGQGRMTLTEIVAKVDTGAEKRAAEALNKRDAYDVLIV
+ GSGPAGAAAAVYSARKGIRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAH
+ VSDYDVDVIDSQSASKLVPAASEDGLHKIETASGAVLKARSIIIATGAKWRNMNVPGE
+ DQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA
+ DQVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYLDRVSGDIHSVALAGIFVQIG
+ LLPNTNWLEGALERNRMGEIIIDAKCETSVKGVFAAGDCTTVPYKQIIIATGEGAKAS
+ LSAFDYLIRTKIA"
+ misc_feature complement(2250011..2251573)
+ /locus_tag="SARI_02327"
+ /note="alkyl hydroperoxide reductase subunit F;
+ Provisional; Region: PRK15317"
+ /db_xref="CDD:237942"
+ misc_feature complement(2251289..2251573)
+ /locus_tag="SARI_02327"
+ /note="Alkyl hydroperoxide reductase F subunit (AhpF)
+ N-terminal domain (NTD) family, N-terminal TRX-fold
+ subdomain; AhpF is a homodimeric flavoenzyme which
+ catalyzes the NADH-dependent reduction of the
+ peroxiredoxin AhpC, which in turn catalyzes the
+ reduction...; Region: AhpF_NTD_N; cd02974"
+ /db_xref="CDD:239272"
+ misc_feature complement(2251316..2251318)
+ /locus_tag="SARI_02327"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:239272"
+ misc_feature complement(2250992..2251258)
+ /locus_tag="SARI_02327"
+ /note="TRX-GRX-like family, Alkyl hydroperoxide reductase
+ F subunit (AhpF) N-terminal domain (NTD) subfamily,
+ C-terminal TRX-fold subdomain; AhpF is a homodimeric
+ flavoenzyme which catalyzes the NADH-dependent reduction
+ of the peroxiredoxin AhpC, which then...; Region:
+ AhpF_NTD_C; cd03026"
+ /db_xref="CDD:239324"
+ misc_feature complement(order(2251178..2251180,2251187..2251189))
+ /locus_tag="SARI_02327"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:239324"
+ misc_feature complement(2250422..>2250694)
+ /locus_tag="SARI_02327"
+ /note="NAD(P)-binding Rossmann-like domain; Region:
+ NAD_binding_8; cl17500"
+ /db_xref="CDD:248054"
+ misc_feature complement(2250299..2250505)
+ /locus_tag="SARI_02327"
+ /note="Pyridine nucleotide-disulphide oxidoreductase;
+ Region: Pyr_redox; pfam00070"
+ /db_xref="CDD:215691"
+ gene complement(2251749..2252312)
+ /locus_tag="SARI_02328"
+ CDS complement(2251749..2252312)
+ /locus_tag="SARI_02328"
+ /inference="protein motif:Gene3D:IPR012335"
+ /inference="protein motif:HMMPfam:IPR000866"
+ /inference="protein motif:superfamily:IPR012336"
+ /inference="similar to AA sequence:REFSEQ:YP_151330.1"
+ /note="with AhpF catalyzes the conversion of alkyl
+ hydroperoxides to their corresponding alcohols; AhpC
+ reduced the hydroperoxide substrate"
+ /codon_start=1
+ /transl_table=11
+ /product="alkyl hydroperoxide reductase subunit C"
+ /protein_id="YP_001571333.1"
+ /db_xref="GI:161504221"
+ /db_xref="InterPro:IPR000866"
+ /db_xref="InterPro:IPR012335"
+ /db_xref="InterPro:IPR012336"
+ /translation="MSLINTKIKPFKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFT
+ FVCPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTG
+ ALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAA
+ HPGEVCPAKWKEGEATLAPSLDLVGKI"
+ misc_feature complement(2251752..2252312)
+ /locus_tag="SARI_02328"
+ /note="alkyl hydroperoxide reductase subunit C;
+ Provisional; Region: PRK10382"
+ /db_xref="CDD:182423"
+ misc_feature complement(2251794..2252303)
+ /locus_tag="SARI_02328"
+ /note="Peroxiredoxin (PRX) family, Typical 2-Cys PRX
+ subfamily; PRXs are thiol-specific antioxidant (TSA)
+ proteins, which confer a protective role in cells through
+ its peroxidase activity by reducing hydrogen peroxide,
+ peroxynitrite, and organic hydroperoxides; Region:
+ PRX_Typ2cys; cd03015"
+ /db_xref="CDD:239313"
+ misc_feature complement(order(2251806..2251817,2251863..2251865,
+ 2251884..2251889,2251899..2251907,2251911..2251919,
+ 2251956..2251958,2251986..2251988,2252166..2252168,
+ 2252175..2252180,2252301..2252303))
+ /locus_tag="SARI_02328"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:239313"
+ misc_feature complement(order(2251971..2251973,2252007..2252009,
+ 2252013..2252015,2252079..2252084,2252184..2252186))
+ /locus_tag="SARI_02328"
+ /note="decamer (pentamer of dimers) interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:239313"
+ misc_feature complement(order(2251953..2251955,2252172..2252174,
+ 2252181..2252183))
+ /locus_tag="SARI_02328"
+ /note="catalytic triad [active]"
+ /db_xref="CDD:239313"
+ misc_feature complement(order(2251815..2251817,2252172..2252174))
+ /locus_tag="SARI_02328"
+ /note="peroxidatic and resolving cysteines [active]"
+ /db_xref="CDD:239313"
+ gene 2252693..2253499
+ /gene="dsbG"
+ /locus_tag="SARI_02329"
+ CDS 2252693..2253499
+ /gene="dsbG"
+ /locus_tag="SARI_02329"
+ /inference="protein motif:Gene3D:IPR012335"
+ /inference="protein motif:superfamily:IPR012336"
+ /inference="similar to AA sequence:REFSEQ:NP_459599.1"
+ /note="Involved in disulfide bond formation"
+ /codon_start=1
+ /transl_table=11
+ /product="disulfide isomerase/thiol-disulfide oxidase"
+ /protein_id="YP_001571334.1"
+ /db_xref="GI:161504222"
+ /db_xref="InterPro:IPR012335"
+ /db_xref="InterPro:IPR012336"
+ /translation="MSVIGIIINTLFALILKGKNMIKRTLLLAMLPILAHAEELPAPV
+ KAIEKQGITILKSFEAPGGMKGYLGKYQDMGVTIYLTPDGKHAVSGYMYNEKGENLSN
+ ALIEKEIYAPAGREMWQKMEKASWILDGKKDAPVVLYIFADPFCPYCKQFWQQARPWV
+ ESGKVQLRTLLVGVIKPESPATAAAILAAKDPAKTWHDYEASAGKMKLKVPASISPAQ
+ MKVINQNQQLMDDLGANATPAIYYMNKDNTLQQVVGLPEKAQLDAMMGQP"
+ misc_feature 2252753..2253490
+ /gene="dsbG"
+ /locus_tag="SARI_02329"
+ /note="disulfide isomerase/thiol-disulfide oxidase;
+ Provisional; Region: dsbG; PRK11657"
+ /db_xref="CDD:183262"
+ misc_feature 2252846..2253487
+ /gene="dsbG"
+ /locus_tag="SARI_02329"
+ /note="DsbA family, DsbC and DsbG subfamily; V-shaped
+ homodimeric proteins containing a redox active CXXC motif
+ imbedded in a TRX fold. They function as protein disulfide
+ isomerases and chaperones in the bacterial periplasm to
+ correct non-native disulfide bonds...; Region:
+ DsbA_DsbC_DsbG; cd03020"
+ /db_xref="CDD:239318"
+ misc_feature order(2252846..2252872,2252876..2252902,2252915..2252971)
+ /gene="dsbG"
+ /locus_tag="SARI_02329"
+ /note="dimerization domain [polypeptide binding]; other
+ site"
+ /db_xref="CDD:239318"
+ misc_feature 2252948..2252971
+ /gene="dsbG"
+ /locus_tag="SARI_02329"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:239318"
+ misc_feature order(2253128..2253130,2253137..2253139)
+ /gene="dsbG"
+ /locus_tag="SARI_02329"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:239318"
+ gene 2253815..2254720
+ /locus_tag="SARI_02330"
+ CDS 2253815..2254720
+ /locus_tag="SARI_02330"
+ /inference="protein motif:FPrintScan:IPR000847"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="protein motif:HMMPfam:IPR005119"
+ /inference="similar to AA sequence:REFSEQ:NP_459598.1"
+ /note="'COG: COG0583 Transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571335.1"
+ /db_xref="GI:161504223"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR005119"
+ /db_xref="InterPro:IPR011991"
+ /translation="MANLYDLKKFDLNLLVIFECIYQHLSISKAAETLYITPSAVSQS
+ LQRLRTQFNDPLFIRSGKGITPTVTGINLHYHLENNLNSLEQTINIMNQSSLKKKFII
+ YSPQILITKQLLEMVNYLRKEPLVEIEHHDILTADEPLADLLAYRKADIVLSMSPISN
+ RSIVCTHLHMVDCVLVCSENHPRLRESASVEELLQETFTHLIANDEVAVKEHQAFLDH
+ VLAERTIGFKSKSLITIANAISVTDLIGFLPKTVVTYYQPTVKLRKVSTPFSIPANPL
+ YLMYNRASMNNSGFAELIEHITKKY"
+ misc_feature 2253842..2254705
+ /locus_tag="SARI_02330"
+ /note="Transcriptional regulator [Transcription]; Region:
+ LysR; COG0583"
+ /db_xref="CDD:223656"
+ misc_feature 2253848..2254024
+ /locus_tag="SARI_02330"
+ /note="Bacterial regulatory helix-turn-helix protein, lysR
+ family; Region: HTH_1; pfam00126"
+ /db_xref="CDD:215735"
+ misc_feature 2254109..2254681
+ /locus_tag="SARI_02330"
+ /note="The substrate binding domain of LysR-type
+ transcriptional regulators (LTTRs), a member of the type 2
+ periplasmic binding fold protein superfamily; Region:
+ PBP2_LTTR_substrate; cl11398"
+ /db_xref="CDD:245600"
+ misc_feature order(2254154..2254159,2254163..2254168,2254175..2254177,
+ 2254184..2254186,2254190..2254198,2254202..2254213,
+ 2254490..2254507,2254523..2254528,2254532..2254537)
+ /locus_tag="SARI_02330"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:176102"
+ gene 2254886..2256121
+ /locus_tag="SARI_02331"
+ CDS 2254886..2256121
+ /locus_tag="SARI_02331"
+ /inference="protein motif:HMMPfam:IPR002500"
+ /inference="similar to AA sequence:INSD:AAX64542.1"
+ /note="'KEGG: eci:UTI89_C2238 1.4e-143 ibrA; hypothetical
+ protein YbdN K00390;
+ COG: COG3969 Predicted phosphoadenosine phosphosulfate
+ sulfotransferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571336.1"
+ /db_xref="GI:161504224"
+ /db_xref="InterPro:IPR002500"
+ /translation="MSVYKVPLDQNVLEAAQERIMWTLETLPRVCVSFSGGKDSGIML
+ HLTATLARKMNKKIHILFIDWEAQFSCTIAYIESLREYYADVIERFYWVALPLTTQNS
+ LSQYQPEWQCWQPGADWVRQPPEDAITDPAFFSFYQHGMTFEQFVRDFADWFSENRPA
+ AMLVGIRSDESYNRFFAIANSHKLRFADDKPWTTLAPKGHTWYIYPIYDWKTADIWTW
+ FAKTGKPCNPLYNLMYQAGVPARYMRICEPFGPEQRQGLWLYHVIEPERWAAMCARVS
+ GVLSGGIYAGQDSHFYGHRKILKPAHLNWEEYALLLLHSMPEVTAEHYRNKIAVYLQW
+ YKKKGMDSIPQTQQGDIGTRDIPSWRRICKVLLNNDYWCRALSFSPTKPKSYHRYNER
+ MKAKRQEWKILCNTDSQLK"
+ misc_feature 2254886..2256085
+ /locus_tag="SARI_02331"
+ /note="Predicted phosphoadenosine phosphosulfate
+ sulfotransferase [General function prediction only];
+ Region: COG3969"
+ /db_xref="CDD:226478"
+ misc_feature 2254970..2255599
+ /locus_tag="SARI_02331"
+ /note="This domain is found in phosphoadenosine
+ phosphosulphate (PAPS) reductase enzymes or PAPS
+ sulphotransferase. PAPS reductase is part of the adenine
+ nucleotide alpha hydrolases superfamily also including N
+ type ATP PPases and ATP sulphurylases. A highly...;
+ Region: PAPS_reductase; cd01713"
+ /db_xref="CDD:238846"
+ misc_feature order(2255246..2255248,2255405..2255407,2255477..2255479,
+ 2255492..2255494)
+ /locus_tag="SARI_02331"
+ /note="Active Sites [active]"
+ /db_xref="CDD:238846"
+ misc_feature 2255594..2256049
+ /locus_tag="SARI_02331"
+ /note="Domain of unknown function (DUF3440); Region:
+ DUF3440; pfam11922"
+ /db_xref="CDD:204778"
+ gene 2256094..2256711
+ /locus_tag="SARI_02332"
+ CDS 2256094..2256711
+ /locus_tag="SARI_02332"
+ /inference="protein motif:HMMPfam:IPR003115"
+ /inference="protein motif:HMMSmart:IPR003115"
+ /inference="similar to AA sequence:REFSEQ:NP_459596.1"
+ /note="'COG: COG1475 Predicted transcriptional regulators;
+ Psort location: cytoskeletal, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571337.1"
+ /db_xref="GI:161504225"
+ /db_xref="InterPro:IPR003115"
+ /translation="MQHRLTTEIIHFLSELPEEERIAAINEFRMAIHSVSPFRNEPVD
+ CVLWVKNDHISPNDYNPNNVAPPEKKLLLKSIEKDGFTQPIVVVKADAEEYEIVDGFH
+ RHELGKGKAVLKTRLKGYLPITCLDRERHERMAATIRHNRARGRHQIHAMSEIVRELS
+ LLGWDESKIGQELGMDADEVLRLKQINGLQELFANRRFSRAWTVK"
+ misc_feature 2256124..2256708
+ /locus_tag="SARI_02332"
+ /note="Stage 0 sporulation protein J (antagonist of Soj)
+ containing ParB-like nuclease domain [Transcription];
+ Region: Spo0J; COG1475"
+ /db_xref="CDD:224392"
+ misc_feature 2256235..2256519
+ /locus_tag="SARI_02332"
+ /note="ParB-like nuclease domain; Region: ParBc;
+ pfam02195"
+ /db_xref="CDD:216926"
+ gene complement(2256712..2257872)
+ /locus_tag="SARI_02333"
+ CDS complement(2256712..2257872)
+ /locus_tag="SARI_02333"
+ /inference="protein motif:HMMPfam:IPR004839"
+ /inference="similar to AA sequence:INSD:AAV78023.1"
+ /note="catalyzes the transfer of an amino moiety"
+ /codon_start=1
+ /transl_table=11
+ /product="putative aminotransferase"
+ /protein_id="YP_001571338.1"
+ /db_xref="GI:161504226"
+ /db_xref="InterPro:IPR004839"
+ /translation="MRNNPLIPQSKLPSLGTTIFTQMSVLAQKYQAINLSQGFPDFDC
+ PRYLQERLAYYVAQGANQYAPMMGAQALREAIADKTAELYGYRPDDACDIIVTAGATE
+ ALYAAITALVRKGDEVICFDPSYDSYAPAVELSGGVLKRIMLAPPHFSVDWQAFSELL
+ SERTRLVILNTPHNPTATVWRQADIEALWQAIGEREIYVLSDEVYEHICFAAEGHASV
+ LAHPQLRERAVVVSSFGKTFHMTGWKIGYCVAPAAISAEIRKIHQYLTFCVNTPAQLA
+ LADMLRAAPEHYRALPDFYRKKRDVLVNALAQSRLKVLPCEGTYFLLIDYSAVSTLND
+ VEFCQWLTKDVGVAAIPLSVFCAAPFPHQLIRLCFAKQELTLLAAADRLCKL"
+ misc_feature complement(2256715..2257872)
+ /locus_tag="SARI_02333"
+ /note="methionine aminotransferase; Validated; Region:
+ PRK09082"
+ /db_xref="CDD:181642"
+ misc_feature complement(2256718..2257776)
+ /locus_tag="SARI_02333"
+ /note="Aspartate aminotransferase family. This family
+ belongs to pyridoxal phosphate (PLP)-dependent aspartate
+ aminotransferase superfamily (fold I). Pyridoxal phosphate
+ combines with an alpha-amino acid to form a compound
+ called a Schiff base or aldimine...; Region: AAT_like;
+ cd00609"
+ /db_xref="CDD:99734"
+ misc_feature complement(order(2257141..2257143,2257165..2257170,
+ 2257174..2257176,2257258..2257260,2257351..2257353,
+ 2257498..2257500,2257570..2257578))
+ /locus_tag="SARI_02333"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:99734"
+ misc_feature complement(order(2257045..2257047,2257054..2257056,
+ 2257141..2257149,2257279..2257281,2257468..2257470,
+ 2257567..2257569))
+ /locus_tag="SARI_02333"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99734"
+ misc_feature complement(2257165..2257167)
+ /locus_tag="SARI_02333"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:99734"
+ gene 2257999..2259087
+ /locus_tag="SARI_02334"
+ CDS 2257999..2259087
+ /locus_tag="SARI_02334"
+ /inference="protein motif:HMMPfam:IPR001670"
+ /inference="protein motif:ScanRegExp:IPR001670"
+ /inference="similar to AA sequence:INSD:CAD05078.1"
+ /note="member of the iron-containing alcohol dehydrogenase
+ family; unknown function"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571339.1"
+ /db_xref="GI:161504227"
+ /db_xref="InterPro:IPR001670"
+ /translation="MNNTEIRVVTGPANYFSHSGSLGRVTDFFTPEQLSHAVWLYGER
+ AITAARPYLPEAFECAGAKHLRFTGHCSEGHVAQLAHACGNDRQVVIGVGGGALLDTA
+ KALAHRLTLPFVAIPTIAATCAAWTPLSVWYNDAGQALQFEIFDDANFLVLVEPRIIL
+ QAPDDYLLAGIGDTLAKWYEAVVLAPQPETLPLTVRLGINSACAIRDLLLASSEQALA
+ DKQQRRLTQAFCDVVDAIIAGGGMVGGLGERYTRVAAAHAVHNGLTVLPQTEKFLHGT
+ KVAYGILVQSALLGQDEVLAQLIAAYRRFHLPTRLADLAVDIKNHADIDKVIAHTLRP
+ VESIHFLPIALMPQTLRAAFEKVETFNV"
+ misc_feature 2258011..2259078
+ /locus_tag="SARI_02334"
+ /note="Glycerol dehydrogenase and related enzymes [Energy
+ production and conversion]; Region: GldA; COG0371"
+ /db_xref="CDD:223448"
+ misc_feature 2258029..2259069
+ /locus_tag="SARI_02334"
+ /note="Glycerol dehydrogenases-like; Region: GlyDH-like1;
+ cd08172"
+ /db_xref="CDD:173931"
+ misc_feature order(2258122..2258124,2258281..2258289,2258296..2258298,
+ 2258305..2258307,2258350..2258355,2258359..2258361,
+ 2258407..2258412,2258470..2258472,2258494..2258496,
+ 2258515..2258517,2258527..2258529,2258767..2258769,
+ 2258779..2258781,2258818..2258820)
+ /locus_tag="SARI_02334"
+ /note="putative active site [active]"
+ /db_xref="CDD:173931"
+ misc_feature order(2258515..2258517,2258767..2258769,2258818..2258820)
+ /locus_tag="SARI_02334"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:173931"
+ gene complement(2259136..2259333)
+ /locus_tag="SARI_02335"
+ CDS complement(2259136..2259333)
+ /locus_tag="SARI_02335"
+ /inference="protein motif:HMMPfam:IPR007423"
+ /inference="similar to AA sequence:INSD:AAL19552.1"
+ /note="'COG: COG2879 Uncharacterized small protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571340.1"
+ /db_xref="GI:161504228"
+ /db_xref="InterPro:IPR007423"
+ /translation="MFDTLSKAGKYLGQAAKMMIGVPDYDNYVEHMRVTHPDQTPMTY
+ EEFFRERQDARYGGKGGARCC"
+ misc_feature complement(2259139..2259333)
+ /locus_tag="SARI_02335"
+ /note="Uncharacterized small protein [Function unknown];
+ Region: COG2879"
+ /db_xref="CDD:225434"
+ gene complement(2259397..2261502)
+ /locus_tag="SARI_02336"
+ CDS complement(2259397..2261502)
+ /locus_tag="SARI_02336"
+ /inference="protein motif:HMMPfam:IPR003706"
+ /note="'KEGG: xtr:3283503 0.0032 ND6; NADH dehydrogenase
+ subunit 6 K03884;
+ COG: COG1966 Carbon starvation protein, predicted membrane
+ protein;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571341.1"
+ /db_xref="GI:161504229"
+ /db_xref="InterPro:IPR003706"
+ /translation="MNKSGKYLVWTALSILGAFALGYIALNRGEQINALWIVVASVCV
+ YLIAYRFYGLYIARKVLAVDPTRMTPAVRHNDGLDYVPTDKKVLFGHHFAAIAGAGPL
+ VGPVLAAQMGYLPGMIWLLAGVVLAGAVQDFMVLFVSTRRDGRSLGELVKEEMGATAG
+ VIALVACFMIMVIILAVLAMIVVKALTHSPWGTYTVAFTIPLAIFMGIYLRYLRPGRI
+ GEVSVIGLVFLIFAIISGGWVAASPTWAPYFDFTGVQLTWMLVGYGFVAAVLPVWLLL
+ APRDYLSTFLKIGTIVGLAVGILIMRPTLTMPALTKFVDGTGPVWTGDLFPFLFITIA
+ CGAVSGFHALISSGTTPKMLANEGQACFIGYGGMLMESFVAIMALVSACIIDPGVYFA
+ MNSPMAVLAPSGTADVVASAAQVVSSWGFAITPDTLHQIANEVGEQSIISRAGGAPTL
+ AVGMAYILHGALGGMMDVAFWYHFAILFEALFILTAVDAGTRAARFMLQDLLGVVSPG
+ LKRTDSLPANLLATALCVLAWGYFLHQGVVDPLGGINTLWPLFGIANQMLAGMALMLC
+ AVVLFKMKRQRYAWVALVPTAWLLICTLTAGWQKAFSPDTKIGFLAIANKFQAMIDSG
+ NISPQYTESQLSQLVFNNRLDAGLTIFFMVVVVVLALFSIKTALAALKIDKPTANETP
+ YESMPENVDEIVTQAKGAH"
+ misc_feature complement(2259400..2261502)
+ /locus_tag="SARI_02336"
+ /note="carbon starvation protein A; Provisional; Region:
+ PRK15015"
+ /db_xref="CDD:184976"
+ misc_feature complement(2260195..2261409)
+ /locus_tag="SARI_02336"
+ /note="Carbon starvation protein CstA; Region: CstA;
+ pfam02554"
+ /db_xref="CDD:217102"
+ misc_feature complement(2259715..2260104)
+ /locus_tag="SARI_02336"
+ /note="C-terminal domain on CstA (DUF4161); Region:
+ DUF4161; pfam13722"
+ /db_xref="CDD:222342"
+ gene complement(2261685..2262101)
+ /locus_tag="SARI_02337"
+ CDS complement(2261685..2262101)
+ /locus_tag="SARI_02337"
+ /inference="protein motif:HMMPfam:IPR006683"
+ /inference="protein motif:HMMTigr:IPR003736"
+ /inference="similar to AA sequence:INSD:AAX64536.1"
+ /note="'KEGG: eco:b0597 9.1e-67 ybdB; hypothetical
+ protein;
+ COG: COG2050 Uncharacterized protein, possibly involved in
+ aromatic compounds catabolism;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571342.1"
+ /db_xref="GI:161504230"
+ /db_xref="InterPro:IPR003736"
+ /db_xref="InterPro:IPR006683"
+ /translation="MMIWKRDLTLDELNATSQNTLVAHLGIVYTRLGDEVLEAEMPVD
+ IRTHQPFGLLHGGASAALAETLGSMAGYLMTRDGQCVVGTELNATHHRAVSQGKVRGV
+ CQPLHLGRQNQSWEITLFDEQGRRCCTCRLGTAVMG"
+ misc_feature complement(2261709..2262032)
+ /locus_tag="SARI_02337"
+ /note="PaaI_thioesterase is a tetrameric acyl-CoA
+ thioesterase with a hot dog fold and one of several
+ proteins responsible for phenylacetic acid (PA)
+ degradation in bacteria. Although orthologs of PaaI exist
+ in archaea and eukaryotes, their function has not...;
+ Region: PaaI_thioesterase; cd03443"
+ /db_xref="CDD:239527"
+ misc_feature complement(order(2261823..2261834,2261853..2261855,
+ 2261940..2261942))
+ /locus_tag="SARI_02337"
+ /note="CoenzymeA binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:239527"
+ misc_feature complement(order(2261832..2261834,2261838..2261852,
+ 2261922..2261924,2261931..2261933,2261937..2261939))
+ /locus_tag="SARI_02337"
+ /note="subunit interaction site [polypeptide binding];
+ other site"
+ /db_xref="CDD:239527"
+ misc_feature complement(order(2261853..2261855,2261895..2261900,
+ 2261907..2261912,2261934..2261936))
+ /locus_tag="SARI_02337"
+ /note="PHB binding site; other site"
+ /db_xref="CDD:239527"
+ gene complement(2262101..2262856)
+ /locus_tag="SARI_02338"
+ CDS complement(2262101..2262856)
+ /locus_tag="SARI_02338"
+ /inference="protein motif:HMMPanther:IPR002347"
+ /inference="protein motif:HMMPfam:IPR002198"
+ /inference="protein motif:ScanRegExp:IPR002198"
+ /inference="similar to AA sequence:REFSEQ:YP_151340.1"
+ /note="'catalyzes the formation of 2,3-dihydroxybenzoate
+ from 2,3-dihydro-2,3-dihydroxybenzoate; involved in the
+ biosynthesis of siderophores, enterobactin, bacillibactin
+ or vibriobactin'"
+ /codon_start=1
+ /transl_table=11
+ /product="2,3-dihydroxybenzoate-2,3-dehydrogenase"
+ /protein_id="YP_001571343.1"
+ /db_xref="GI:161504231"
+ /db_xref="InterPro:IPR002198"
+ /db_xref="InterPro:IPR002347"
+ /translation="MPGIDFSDQTIWVTGAGKGIGYATALAFVDAGARVIGFDREFTP
+ ADYPFTTEVMDVADAAQVAQVCQRILQKTPRLDVLVNAAGILRMGATDALSVDDWQQT
+ FAVNVGGAFNLFSQTMGQFRRQQGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALT
+ VGLELAGSGVRCNVVSPGSTDTDMQRALWVSEEAEQQRIRGFGEQFKLGIPLGKIARP
+ QEIASTILFLASDLASHITLQDIVVDGGSTLGA"
+ misc_feature complement(2262104..2262856)
+ /locus_tag="SARI_02338"
+ /note="2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated;
+ Region: PRK08220"
+ /db_xref="CDD:236190"
+ misc_feature complement(2262104..2262826)
+ /locus_tag="SARI_02338"
+ /note="2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases,
+ classical (c) SDRs; Region: DH-DHB-DH_SDR_c; cd05331"
+ /db_xref="CDD:187592"
+ misc_feature complement(order(2262308..2262313,2262317..2262328,
+ 2262404..2262406,2262416..2262418,2262455..2262463,
+ 2262542..2262544,2262605..2262613,2262689..2262697,
+ 2262734..2262742,2262797..2262808,2262812..2262814))
+ /locus_tag="SARI_02338"
+ /note="putative NAD(P) binding site [chemical binding];
+ other site"
+ /db_xref="CDD:187592"
+ misc_feature complement(order(2262404..2262406,2262416..2262418,
+ 2262455..2262457,2262539..2262541))
+ /locus_tag="SARI_02338"
+ /note="active site"
+ /db_xref="CDD:187592"
+ gene complement(2262856..2263713)
+ /locus_tag="SARI_02339"
+ CDS complement(2262856..2263713)
+ /locus_tag="SARI_02339"
+ /inference="protein motif:Gene3D:IPR000868"
+ /inference="protein motif:HMMPfam:IPR000868"
+ /inference="protein motif:HMMPfam:IPR006163"
+ /inference="protein motif:superfamily:IPR000868"
+ /inference="protein motif:superfamily:IPR009081"
+ /inference="similar to AA sequence:INSD:AAL19548.1"
+ /note="'KEGG: spt:SPA2137 5.9e-150 entB; isochorismatase
+ K01252;
+ COG: COG3433 Aryl carrier domain;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571344.1"
+ /db_xref="GI:161504232"
+ /db_xref="InterPro:IPR000868"
+ /db_xref="InterPro:IPR006163"
+ /db_xref="InterPro:IPR009081"
+ /translation="MAIPKLQSYALPTALDIPTNKVNWVFEPERAALLIHDMQEYFVS
+ FWGRNCPMMEQVIANIAALRQYCKEHHIPVYYTAQPKEQSDEDRALLNDMWGPGLTRS
+ PDQQNVVEALMPDEADTVLVKWRYSAFHRSPLEQMLKDTGRNQLIITGVYAHIGCMTT
+ ATDAFMRDIKPFMVADALADFSREEHLMALNYVAGRSGRVVMTESLLPTPVPASKAAL
+ RALILPLLDETDEPLDDENLIDYGLDSVRMMGLAARWRKVHGDIDFVMLAKNPTIDAW
+ WALLSREVQ"
+ misc_feature complement(2263102..2263710)
+ /locus_tag="SARI_02339"
+ /note="Isochorismatase, also known as 2,3 dihydro-2,3
+ dihydroxybenzoate synthase, catalyses the conversion of
+ isochorismate, in the presence of water, to
+ 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of
+ a vinyl ether, an uncommon reaction in biological...;
+ Region: isochorismatase; cd01013"
+ /db_xref="CDD:238495"
+ misc_feature complement(order(2263171..2263173,2263249..2263251,
+ 2263258..2263260,2263336..2263338,2263429..2263431,
+ 2263588..2263590,2263705..2263707))
+ /locus_tag="SARI_02339"
+ /note="hydrophobic substrate binding pocket; other site"
+ /db_xref="CDD:238495"
+ misc_feature complement(2263099..2263623)
+ /locus_tag="SARI_02339"
+ /note="Isochorismatase family; Region: Isochorismatase;
+ pfam00857"
+ /db_xref="CDD:216156"
+ misc_feature complement(order(2263246..2263248,2263258..2263260,
+ 2263345..2263347,2263450..2263452,2263477..2263479,
+ 2263603..2263605))
+ /locus_tag="SARI_02339"
+ /note="active site"
+ /db_xref="CDD:238495"
+ misc_feature complement(2263258..2263263)
+ /locus_tag="SARI_02339"
+ /note="conserved cis-peptide bond; other site"
+ /db_xref="CDD:238495"
+ misc_feature complement(2262859..>2263005)
+ /locus_tag="SARI_02339"
+ /note="Aryl carrier domain [Secondary metabolites
+ biosynthesis, transport, and catabolism]; Region: COG3433"
+ /db_xref="CDD:225967"
+ gene complement(2263727..2265340)
+ /gene="entE"
+ /locus_tag="SARI_02340"
+ CDS complement(2263727..2265340)
+ /gene="entE"
+ /locus_tag="SARI_02340"
+ /inference="protein motif:HMMPfam:IPR000873"
+ /inference="protein motif:HMMTigr:IPR011963"
+ /inference="protein motif:ScanRegExp:IPR000873"
+ /inference="similar to AA sequence:REFSEQ:YP_151342.1"
+ /note="'bifunctional 2,3-dihydroxybenzoate-AMP
+ ligase/S-dihydroxybenzoyltransferase; activates the
+ carboxylate group of 2,3-dihydroxy-benzoate forming
+ (2,3-dihydroxybenzoyl)adenylate then catalyzes the
+ acylation of holo-entB with 2,3-dihydroxy-benzoate
+ adenylate'"
+ /codon_start=1
+ /transl_table=11
+ /product="enterobactin synthase subunit E"
+ /protein_id="YP_001571345.1"
+ /db_xref="GI:161504233"
+ /db_xref="InterPro:IPR000873"
+ /db_xref="InterPro:IPR011963"
+ /translation="MMRIPFTRWPDEFARRYREKGYWQDVPLTDILTRHADSDKTAVI
+ EGERAFSYRQLNQAADNLACSLRRQGIKPGETALVQLGNVPELYITFFALLKLGVAPV
+ LALFSHQRTELNAYATQIAPTLVIADRQHTLFAGEAFLNTFVAEHRSVRVVLLRNDDG
+ DHSLDAAMRQTAEDFTATPSPADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSNEI
+ CGFNEETRFLCAIPAAHNYAMSSPGALGVFLAKGTVVLATDPSATLCFPLIEKHQINA
+ TALVPPAVSLWLQAIQEWGGNAPLASLRLLQVGGARLSATLAARIPAEIGCQLQQVFG
+ MAEGLVNYTRLDDSPERIIHTQGRPMCPDDEVWVADADGNPLPPGEIGRLMTRGPYTF
+ RGYFNSPQHNANAFDANGFYCSGDLISIDQDGYITVHGREKDQINRGGEKIAAEEIEN
+ LLLRHPAVIHAALVSMEDELLGEKSCAYLVVKEPLRAVQVRRFLREQGVAEFKLPDRV
+ ECVASLPLTPVGKVDKKQLRQWLVSRSPL"
+ misc_feature complement(2263733..2265337)
+ /gene="entE"
+ /locus_tag="SARI_02340"
+ /note="enterobactin synthase subunit E; Provisional;
+ Region: entE; PRK10946"
+ /db_xref="CDD:236803"
+ misc_feature complement(2263760..2265307)
+ /gene="entE"
+ /locus_tag="SARI_02340"
+ /note="2,3-dihydroxybenzoate-AMP ligase; Region:
+ 23DHB-AMP_lg; cd05920"
+ /db_xref="CDD:213287"
+ misc_feature complement(order(2264744..2264749,2264753..2264770,
+ 2264777..2264779))
+ /gene="entE"
+ /locus_tag="SARI_02340"
+ /note="acyl-activating enzyme (AAE) consensus motif; other
+ site"
+ /db_xref="CDD:213287"
+ misc_feature complement(order(2263778..2263780,2264048..2264050,
+ 2264057..2264059,2264093..2264095,2264099..2264101,
+ 2264321..2264323,2264333..2264347,2264405..2264413,
+ 2264618..2264620,2264630..2264638,2264762..2264770))
+ /gene="entE"
+ /locus_tag="SARI_02340"
+ /note="active site"
+ /db_xref="CDD:213287"
+ misc_feature complement(order(2263778..2263780,2264048..2264050,
+ 2264057..2264059,2264093..2264095,2264099..2264101,
+ 2264336..2264347,2264408..2264413,2264762..2264770))
+ /gene="entE"
+ /locus_tag="SARI_02340"
+ /note="AMP binding site [chemical binding]; other site"
+ /db_xref="CDD:213287"
+ misc_feature complement(order(2263778..2263780,2264321..2264323,
+ 2264333..2264341,2264345..2264347,2264411..2264413,
+ 2264618..2264620,2264630..2264638))
+ /gene="entE"
+ /locus_tag="SARI_02340"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:213287"
+ gene complement(2265347..2266522)
+ /locus_tag="SARI_02341"
+ CDS complement(2265347..2266522)
+ /locus_tag="SARI_02341"
+ /inference="protein motif:BlastProDom:IPR005801"
+ /inference="protein motif:HMMPfam:IPR005801"
+ /inference="protein motif:HMMPIR:IPR004561"
+ /inference="protein motif:HMMTigr:IPR004561"
+ /inference="similar to AA sequence:INSD:AAL19546.1"
+ /note="'KEGG: stm:STM0595 1.8e-203 entC; isochorismate
+ synthetase, enterochelin biosynthesis K02361;
+ COG: COG1169 Isochorismate synthase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="isochorismate synthase"
+ /protein_id="YP_001571346.1"
+ /db_xref="GI:161504234"
+ /db_xref="InterPro:IPR004561"
+ /db_xref="InterPro:IPR005801"
+ /translation="MDMSLAEDAQETMATLAPDRFFFMSPYRSFTTSGCFARYTEPAV
+ SGDSPDSPFQQKLRQQFAAAKSQGIVNPILVGAIPFDTCQPSSLFIPLEWQLFSRQEK
+ QRTARYFTDHQSLTVTARKAIPEQDAFEAMVARAAMLTATPDVDKVVLSRLIDITTDV
+ AVDSGALLERLVAQNPVSYNFHVPLADGGVLLGASPELLLRKEGERFSSLPLAGSARR
+ QPDDVLDREAGNRLLASQKDRHEHELVTQAMKQILRDRSTELQLPSSPQLITTPTLWH
+ LGTPFEGKANAGENALTLACLLHPTPALSGFPHQVAKKLIAELEPFDRELFGGIVGWC
+ DAEGNGEWVVTIRCAKLRGNQVRLFAGAGIVPASSPVGEWRETGVKLSTMLNVFGLH"
+ misc_feature complement(2265350..2266522)
+ /locus_tag="SARI_02341"
+ /note="isochorismate synthase EntC; Provisional; Region:
+ PRK15016"
+ /db_xref="CDD:184977"
+ misc_feature complement(2265383..2266150)
+ /locus_tag="SARI_02341"
+ /note="chorismate binding enzyme; Region: Chorismate_bind;
+ pfam00425"
+ /db_xref="CDD:215913"
+ gene 2266831..2267787
+ /locus_tag="SARI_02342"
+ CDS 2266831..2267787
+ /locus_tag="SARI_02342"
+ /inference="protein motif:HMMPfam:IPR002491"
+ /inference="similar to AA sequence:REFSEQ:YP_215612.1"
+ /note="with FepCDG is involved in the transport of ferric
+ enterobactin"
+ /codon_start=1
+ /transl_table=11
+ /product="iron-enterobactin transporter periplasmic
+ binding protein"
+ /protein_id="YP_001571347.1"
+ /db_xref="GI:161504235"
+ /db_xref="InterPro:IPR002491"
+ /translation="MRLPAFHRWLLFVIGLSVSGISLARDAGWPRQIQDSRGVHTLDH
+ KPARIVSTSVTLTGSLLAIDAPVVASGATTPNNRFADDQGFMRQWSDVAKARHVARLY
+ IGEPNAETVAAQMPDLILISATGGDSALALYDQLSAIAPTLVINYDDKSWQSLLTQLG
+ EITGQEKQAAARIAEFEAQLTTVKQRIALPPQPVSALVYTPAAHSANLWTPESAQGKL
+ LAQLGFTLATLPRGLQTSKSQGKRHDIIQLGGENLAAGLNGESLFLFAGDNKDVAALY
+ ANPLLAHLPAVQNKRVYALGTETFRLDYYSATLLLNRLAALF"
+ misc_feature 2266843..2267784
+ /locus_tag="SARI_02342"
+ /note="iron-enterobactin transporter periplasmic binding
+ protein; Provisional; Region: PRK10957"
+ /db_xref="CDD:236806"
+ misc_feature 2266960..2267769
+ /locus_tag="SARI_02342"
+ /note="Fe3+-siderophore binding domain FhuD. These
+ proteins have been shown to function as initial receptors
+ in ABC transport of Fe3+-siderophores in many eubacterial
+ species. They belong to the TroA-like superfamily of
+ helical backbone metal receptor proteins...; Region: FhuD;
+ cd01146"
+ /db_xref="CDD:238566"
+ misc_feature order(2267095..2267097,2267137..2267142,2267203..2267205,
+ 2267449..2267451)
+ /locus_tag="SARI_02342"
+ /note="siderophore binding site; other site"
+ /db_xref="CDD:238566"
+ gene complement(2267850..2269094)
+ /locus_tag="SARI_02343"
+ CDS complement(2267850..2269094)
+ /locus_tag="SARI_02343"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="similar to AA sequence:SwissProt:Q8ZR35"
+ /note="protein p43; inner membrane protein that exports
+ enterobactin to the periplasmic space; member of the major
+ facilitator superfamily (MFS) of transporters"
+ /codon_start=1
+ /transl_table=11
+ /product="enterobactin exporter EntS"
+ /protein_id="YP_001571348.1"
+ /db_xref="GI:161504236"
+ /db_xref="InterPro:IPR011701"
+ /translation="MNRQSWLLNLSLLKTHPAFRAVFLARFISIVSLGLLGVAVPVQI
+ QMMTHSTWQVGLSVTLTGGAMFIGLMVGGVLADRYERKKVILLARGTCGIGFIGLCVN
+ VLLPEPSLLAIYLLGLWDGFFASLGVTALLAATPALVGRENLMQAGAITMLTVRLGSV
+ ISPMLGGILLASGGVAWNYGLAAAGTFITLLPLLTLPRLPVPPQPRENPFIALLAAFR
+ FLLASPLIGGIALLGGLVTMASAVRVLYPALAMSWQMSAAQIGLLYAAIPLGAAIGAL
+ TSGQLAHSVRPGLIMLVSTVGSFLAVGLFAIMPVWIAGVICLALFGWLSAISSLLQYT
+ LLQTQTPENMLGRMNGLWTAQNVTGDAIGAALLGGLGAMMTPVASASVSGFGLVIIGL
+ LLLLVLGELRRFRQTPPVSDAG"
+ misc_feature complement(2267853..2269094)
+ /locus_tag="SARI_02343"
+ /note="enterobactin exporter EntS; Provisional; Region:
+ PRK10489"
+ /db_xref="CDD:236700"
+ misc_feature complement(<2268531..2269040)
+ /locus_tag="SARI_02343"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature complement(order(2268618..2268620,2268636..2268641,
+ 2268648..2268653,2268687..2268689,2268696..2268701,
+ 2268708..2268713,2268720..2268725,2268876..2268881,
+ 2268885..2268890,2268900..2268902,2268909..2268914,
+ 2268921..2268923,2268972..2268977,2268981..2268989,
+ 2268996..2268998))
+ /locus_tag="SARI_02343"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene 2269222..2270211
+ /locus_tag="SARI_02344"
+ CDS 2269222..2270211
+ /locus_tag="SARI_02344"
+ /inference="protein motif:HMMPfam:IPR000522"
+ /inference="similar to AA sequence:INSD:CAD05068.1"
+ /note="with FepBCG is involved in the transport of ferric
+ enterobactin"
+ /codon_start=1
+ /transl_table=11
+ /product="iron-enterobactin transporter membrane protein"
+ /protein_id="YP_001571349.1"
+ /db_xref="GI:161504237"
+ /db_xref="InterPro:IPR000522"
+ /translation="MTRAFAVPGLLLLLILAAVLSLVIGAKPLPAAVVLDAFTGVCQS
+ ADCTIVLDARLPRTLAGLLAGGALGLAGALMQTLTRNPLADPGILGVNNGASFAIVLG
+ AALFGFSTPLEQLFMAFSGALIASLIVAFTGSQGGGQLSPVRLTLAGVALGAVLEGLT
+ SGIALLNPEVYDQLRFWQAGSLDIRSLQTLKVAIAPVVIAGIVALLLSRALNSLSLGS
+ DTATALGSKVARTQLIGLLAITVLCGSATALVGPIAFIGLMMPHMARWLVGADHRWSL
+ PVTLLATPALLLFADIIGRLLVPGELRVSVVSAFIGAPVLIFLVRRKSSGGGL"
+ misc_feature 2269303..>2270205
+ /locus_tag="SARI_02344"
+ /note="iron-hydroxamate transporter permease subunit;
+ Provisional; Region: PRK10577"
+ /db_xref="CDD:236720"
+ misc_feature 2269444..2270181
+ /locus_tag="SARI_02344"
+ /note="Transmembrane subunit (TM), of Periplasmic Binding
+ Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters involved in the uptake of siderophores, heme,
+ vitamin B12, or the divalent cations Mg2+ and Zn2+.
+ PBP-dependent ABC transporters consist of...; Region:
+ TM_ABC_iron-siderophores_like; cd06550"
+ /db_xref="CDD:119348"
+ misc_feature order(2269447..2269449,2269459..2269467,2269834..2269839,
+ 2269843..2269851,2269855..2269860,2269864..2269881,
+ 2269885..2269893,2270014..2270016,2270035..2270037)
+ /locus_tag="SARI_02344"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119348"
+ misc_feature order(2269462..2269464,2269468..2269470,2269483..2269485,
+ 2269651..2269653,2269657..2269662,2269669..2269674,
+ 2269681..2269686,2269693..2269695,2269702..2269707,
+ 2269711..2269713,2269744..2269749,2269756..2269758,
+ 2269984..2269986,2270137..2270139,2270146..2270151,
+ 2270158..2270160,2270167..2270172,2270179..2270181)
+ /locus_tag="SARI_02344"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119348"
+ misc_feature order(2269711..2269713,2269786..2269788,2269960..2269962,
+ 2269972..2269974,2270104..2270106,2270128..2270130)
+ /locus_tag="SARI_02344"
+ /note="putative PBP binding regions; other site"
+ /db_xref="CDD:119348"
+ unsure 2269708..2269881
+ /locus_tag="SARI_02344"
+ /note="Sequence derived from one plasmid subclone"
+ unsure 2269989..2270131
+ /locus_tag="SARI_02344"
+ /note="Sequence derived from one plasmid subclone"
+ gene 2270208..2271200
+ /locus_tag="SARI_02345"
+ CDS 2270208..2271200
+ /locus_tag="SARI_02345"
+ /inference="protein motif:HMMPfam:IPR000522"
+ /inference="similar to AA sequence:REFSEQ:YP_215609.1"
+ /note="with FepBCD is involved in the transport of ferric
+ enterobactin"
+ /codon_start=1
+ /transl_table=11
+ /product="iron-enterobactin transporter permease"
+ /protein_id="YP_001571350.1"
+ /db_xref="GI:161504238"
+ /db_xref="InterPro:IPR000522"
+ /translation="MMFLSRRLIISCLLLAAGCFAIGLWSLQRGAVHLDTGQIIAALL
+ GDAPRNITLVVTEWRLPRVLMALLIGAALGVSGAIFQSLMRNPLGSPDVMGFNTGAWS
+ GVLVAMVLFGQHLTAIALAAMAGGIVTSLIVWLLAWRNGIETFRLIIIGIGIRAMLVA
+ FNTWLLLQASLETALTAGLWNAGSLNGLTWAKTWPSAPLIIVMLTGAALLVRRMRLLE
+ MGDDSACALGVSVERSRLMMLLVAVSLTAAATALAGPISFIALVAPHIARRLSGTARW
+ GLTQSALCGALLLLAADACAQQLFMPYQLPVGVVTVSLGGIYLIVLLIQESRKK"
+ misc_feature 2270259..2271197
+ /locus_tag="SARI_02345"
+ /note="ABC-type enterobactin transport system, permease
+ component [Inorganic ion transport and metabolism];
+ Region: FepG; COG4779"
+ /db_xref="CDD:227119"
+ misc_feature 2270394..2271176
+ /locus_tag="SARI_02345"
+ /note="Transmembrane subunit (TM), of Periplasmic Binding
+ Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters involved in the uptake of siderophores, heme,
+ vitamin B12, or the divalent cations Mg2+ and Zn2+.
+ PBP-dependent ABC transporters consist of...; Region:
+ TM_ABC_iron-siderophores_like; cd06550"
+ /db_xref="CDD:119348"
+ misc_feature order(2270448..2270450,2270460..2270468,2270829..2270834,
+ 2270838..2270846,2270850..2270855,2270859..2270876,
+ 2270880..2270888,2271009..2271011,2271030..2271032)
+ /locus_tag="SARI_02345"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119348"
+ misc_feature order(2270463..2270465,2270469..2270471,2270484..2270486,
+ 2270643..2270645,2270649..2270654,2270661..2270666,
+ 2270673..2270678,2270685..2270687,2270694..2270699,
+ 2270703..2270705,2270739..2270744,2270751..2270753,
+ 2270979..2270981,2271132..2271134,2271141..2271146,
+ 2271153..2271155,2271162..2271167,2271174..2271176)
+ /locus_tag="SARI_02345"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119348"
+ misc_feature order(2270703..2270705,2270781..2270783,2270955..2270957,
+ 2270967..2270969,2271099..2271101,2271123..2271125)
+ /locus_tag="SARI_02345"
+ /note="putative PBP binding regions; other site"
+ /db_xref="CDD:119348"
+ gene 2271197..2271991
+ /locus_tag="SARI_02346"
+ CDS 2271197..2271991
+ /locus_tag="SARI_02346"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:INSD:AAX64527.1"
+ /note="with FepBDE is involved in the transport of ferric
+ enterobactin"
+ /codon_start=1
+ /transl_table=11
+ /product="iron-enterobactin transporter ATP-binding
+ protein"
+ /protein_id="YP_001571351.1"
+ /db_xref="GI:161504239"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MTESVARLRGDQLTLGYGSYTVAKNLNVSIPDGHFTAIIGPNGC
+ GKSTLLRTLSRLMTPIDGHVWLDGEQIQRYASKEVARRIGLLAQNATTPGDITVQELV
+ ARGRYPHQPLFTRWRKEDADAVANAMRATGITSLATQSVDTLSGGQRQRAWIAMVLAQ
+ ETSIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYATHLIALR
+ EGHIVAQGAPKEIVTAELIEKVYGLRCMIIDDPVAGTPLIVPLGRQ"
+ misc_feature 2271197..2271988
+ /locus_tag="SARI_02346"
+ /note="iron-enterobactin transporter ATP-binding protein;
+ Provisional; Region: PRK10253"
+ /db_xref="CDD:182336"
+ misc_feature 2271227..2271874
+ /locus_tag="SARI_02346"
+ /note="ATP-binding component of iron-siderophores, vitamin
+ B12 and hemin transporters and related proteins; Region:
+ ABC_Iron-Siderophores_B12_Hemin; cd03214"
+ /db_xref="CDD:213181"
+ misc_feature 2271314..2271337
+ /locus_tag="SARI_02346"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213181"
+ misc_feature order(2271323..2271328,2271332..2271340,2271458..2271460,
+ 2271698..2271703,2271800..2271802)
+ /locus_tag="SARI_02346"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213181"
+ misc_feature 2271449..2271460
+ /locus_tag="SARI_02346"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213181"
+ misc_feature 2271626..2271655
+ /locus_tag="SARI_02346"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213181"
+ misc_feature 2271686..2271703
+ /locus_tag="SARI_02346"
+ /note="Walker B; other site"
+ /db_xref="CDD:213181"
+ misc_feature 2271710..2271721
+ /locus_tag="SARI_02346"
+ /note="D-loop; other site"
+ /db_xref="CDD:213181"
+ misc_feature 2271788..2271808
+ /locus_tag="SARI_02346"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213181"
+ gene complement(2272046..2273182)
+ /locus_tag="SARI_02347"
+ CDS complement(2272046..2273182)
+ /locus_tag="SARI_02347"
+ /inference="protein motif:HMMPfam:IPR003856"
+ /inference="similar to AA sequence:REFSEQ:NP_459581.1"
+ /note="part of the ferric enterobactin transport system;
+ necessary for enetrobactin uptake"
+ /codon_start=1
+ /transl_table=11
+ /product="ferric enterobactin transport protein FepE"
+ /protein_id="YP_001571352.1"
+ /db_xref="GI:161504240"
+ /db_xref="InterPro:IPR003856"
+ /translation="MSSLNINQEKNQQFAGYSLPPANSHEIDLFSLMEVLWQAKRHIL
+ ATIFAFACMGLLLSFLLPQKWTSQAIVTPAESVQWQGLERTLTALRVLDMDVSVDRVS
+ VFNLFIKKFSSLLLLEEYLRSSPYVMDQLKGAKIDEQDLHRAIVALSEKMKAVDSNVG
+ KKNETSLFTSWTLSFTAPTREEAQKVLSGYIQYISAIVVKETLENIRNQLEIKTRYEQ
+ EKLAMDRVRLRNQLDANIQRLRYSLEIANAAGIKKPVYSNGQAVKDDPDFSISLGADG
+ ISRKLEIEKGVTDMAEINGDLRNRQYHVEQLAAMNVRDVTFTPFKYQLSPSLPVKKDG
+ PGKAIIIILATLIGGMMACGGVLLRHAMVSRKMENALTIDERLV"
+ misc_feature complement(2272049..2273182)
+ /locus_tag="SARI_02347"
+ /note="LPS O-antigen length regulator; Provisional;
+ Region: PRK10381"
+ /db_xref="CDD:182422"
+ misc_feature complement(<2272898..2273107)
+ /locus_tag="SARI_02347"
+ /note="Chain length determinant protein; Region: Wzz;
+ pfam02706"
+ /db_xref="CDD:217194"
+ gene complement(2273426..2277310)
+ /gene="entF"
+ /locus_tag="SARI_02348"
+ CDS complement(2273426..2277310)
+ /gene="entF"
+ /locus_tag="SARI_02348"
+ /inference="protein motif:Gene3D:IPR009081"
+ /inference="protein motif:HMMPfam:IPR000873"
+ /inference="protein motif:HMMPfam:IPR001031"
+ /inference="protein motif:HMMPfam:IPR001242"
+ /inference="protein motif:HMMPfam:IPR006163"
+ /inference="protein motif:HMMTigr:IPR010071"
+ /inference="protein motif:ScanRegExp:IPR000873"
+ /inference="protein motif:ScanRegExp:IPR006162"
+ /note="'with EntB, EntD, and EntE forms the multienzyme
+ complex enterobactin synthase; EntF is the serine
+ activating enzyme which catalyzes the formation of the
+ amide and ester bonds of the cyclic enterobactin'"
+ /codon_start=1
+ /transl_table=11
+ /product="enterobactin synthase subunit F"
+ /protein_id="YP_001571353.1"
+ /db_xref="GI:161504241"
+ /db_xref="InterPro:IPR000873"
+ /db_xref="InterPro:IPR001031"
+ /db_xref="InterPro:IPR001242"
+ /db_xref="InterPro:IPR006162"
+ /db_xref="InterPro:IPR006163"
+ /db_xref="InterPro:IPR009081"
+ /db_xref="InterPro:IPR010071"
+ /translation="MTQRLPLVAAQSGIWMAEKLSDFPSAWSVAHYVELTGELDAALL
+ AKAVAVGMLQADTLQMRFTEENGEVWQWIDPERTFGEPTIVDLRDQAEPHHAALALMQ
+ ADLRQNLRADSGNPLAFHQLIRIDDMRWYWYQRYHHLLVDGFSFPAITRQIAAIYRAW
+ QSGDPTPDSPFTPFADVVEEYQRYRQSEAWQRDGAFWAQQRRELPPPASISAAPLPGR
+ SATADVLRMKLSAPEGAFRQLAAHMPEIPRADLALALVTLWLGRLCGRMDYAAGFIFM
+ RRMGSAALTATGPVLNVLPLAVNLHATEDLPTLAKRLAVQLKKMRRHQRYDAEQIVRD
+ SGRAAGETPLFGPVLNIKVFDYHLDFPGIQAQTHTLATGPVNDLELALFPDENGDLDI
+ ELLANAQRYDDATLSRHALRLMALITQFADNPALRCGDAQMLLAEEQTQLTHLNNTAV
+ TIPVATLSDLVAQQAQKTPEASALADAHYHFTYHEMREQIVALAHALRERGVQPGDSV
+ AVALPRSVFLTIALHGIVEAGAAWLPLDTGYPDDRLRMMLEDAQPKLLITTQAQLARF
+ HDIPGMEYLCYSEPLPVSDATPLGLSLPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRL
+ LWMQDHYPLTADDVVAQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAMQQFF
+ AQYGITTTHFVPSMLSAFIASLTPASAGKSCAAFKRVFCSGEALPTALCREWETLTGA
+ PLHNLYGPTEAAVDVSWYPACGAELAAVDGNSIPIGYPVWNTGLRILDAHMQPVPPGV
+ AGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDSGAVEYLGRS
+ DDQLKIRGQRIELGEIDRVMQMLPDVEQGVAHACVFNQAAATGGDARQLVGYLVSHSG
+ LPLDLSALQEKLRQKLPAHMVPVVLLQLAGLPLSANGKLDRKALPLPELTPCVKGRAP
+ QSATEVAVAAAFSSLLGCEINDVESDFFALGGHSLLAMKLAAQLSQTFNRQVTPGQVM
+ VASDVAQLSKLLDADDDERSRNLGFGPLLPLRESDGPTLFCFHPASGFAWQFSVLSRY
+ LSPSWSIMGIQSPRPAGPMQTATALDELCEHHLATLLARQPHGPYYLLGYSLGGTLAQ
+ GIAARLCARGETVAFLGLLDTWPPETQNWRGKKANGLNPDVLAEIERERAAFVTAQQG
+ NASDALFAAIEGNYADAVRLLTTAHSIPFDGHATLFVADKTVPEGVSPEQSWSPWITS
+ LTIYRQPYAHVDIISPTAFETIGPIINKLINK"
+ misc_feature complement(2273429..2277310)
+ /gene="entF"
+ /locus_tag="SARI_02348"
+ /note="enterobactin synthase subunit F; Provisional;
+ Region: entF; PRK10252"
+ /db_xref="CDD:236668"
+ misc_feature complement(2274437..2275906)
+ /gene="entF"
+ /locus_tag="SARI_02348"
+ /note="The adenylation domain of nonribosomal peptide
+ synthetases (NRPS); Region: A_NRPS; cd05930"
+ /db_xref="CDD:213296"
+ misc_feature complement(order(2275478..2275483,2275487..2275504,
+ 2275511..2275513))
+ /gene="entF"
+ /locus_tag="SARI_02348"
+ /note="acyl-activating enzyme (AAE) consensus motif; other
+ site"
+ /db_xref="CDD:213296"
+ misc_feature complement(order(2274455..2274457,2274746..2274748,
+ 2274755..2274757,2274791..2274793,2274986..2274988,
+ 2275064..2275081,2275139..2275144,2275499..2275504))
+ /gene="entF"
+ /locus_tag="SARI_02348"
+ /note="AMP binding site [chemical binding]; other site"
+ /db_xref="CDD:213296"
+ misc_feature complement(2274185..2274376)
+ /gene="entF"
+ /locus_tag="SARI_02348"
+ /note="Phosphopantetheine attachment site; Region:
+ PP-binding; pfam00550"
+ /db_xref="CDD:215989"
+ gene complement(2277307..2277525)
+ /locus_tag="SARI_02349"
+ CDS complement(2277307..2277525)
+ /locus_tag="SARI_02349"
+ /inference="protein motif:HMMPfam:IPR005153"
+ /inference="similar to AA sequence:INSD:AAL19538.1"
+ /note="'COG: COG3251 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571354.1"
+ /db_xref="GI:161504242"
+ /db_xref="InterPro:IPR005153"
+ /translation="MEFSNPFDNPQGQFYILQNAQRQFSLWPAACALPAGWDVVCEPQ
+ SQDACQQWLNTRWTTLNPAHYADRQEAK"
+ misc_feature complement(2277310..2277522)
+ /locus_tag="SARI_02349"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG3251"
+ /db_xref="CDD:225790"
+ gene complement(2277556..2278773)
+ /locus_tag="SARI_02350"
+ CDS complement(2277556..2278773)
+ /locus_tag="SARI_02350"
+ /inference="protein motif:HMMPfam:IPR000801"
+ /inference="similar to AA sequence:INSD:AAL19537.1"
+ /note="'KEGG: btk:BT9727_2470 2.4e-12 probable esterase
+ K07214;
+ COG: COG2382 Enterochelin esterase and related enzymes;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="enterobactin/ferric enterobactin esterase"
+ /protein_id="YP_001571355.1"
+ /db_xref="GI:161504243"
+ /db_xref="InterPro:IPR000801"
+ /translation="MMEGSLATGSEAWWRTKTGPEWGREKDGNYRVTFWWRDPQGNEK
+ YSPIRRVWVYITGVTDHHQNAQPQTMARIAGTDVWRWSTVLSANWRGSYCFIPTERDD
+ IFSAFAPGETPDRNALRKGWRQLLPQAIADPLNSQSWRGGRGHAVSALEMPDAPLQPG
+ WDRPETPYSPPLMMQWHSERLGNSRRVWILTTGDEAPEERPLAILLDGQFWAESMPVW
+ PALASLTHQRLLPGAVYLLIDAIDTQRRSQELPCNADFWLAVQQELLPQVRAVTPFSD
+ DAARTVVAGQSFGGLSALYAGLNWPARFGCVLSQSGSFWWPHRVNPQEGEVITGLKNG
+ ALRARGLRIVLEAGIREPFVFQANQALYAQLSTSPQTIFWRQVDGGHDALCWRGGLTQ
+ GLMLLWQPLIDTL"
+ misc_feature complement(2277568..2278773)
+ /locus_tag="SARI_02350"
+ /note="enterobactin/ferric enterobactin esterase;
+ Provisional; Region: PRK10439"
+ /db_xref="CDD:236695"
+ misc_feature complement(2278288..2278683)
+ /locus_tag="SARI_02350"
+ /note="Domain of unknown function (DUF3327); Region:
+ DUF3327; pfam11806"
+ /db_xref="CDD:221235"
+ misc_feature complement(<2277826..2278242)
+ /locus_tag="SARI_02350"
+ /note="Predicted hydrolase of the alpha/beta superfamily
+ [General function prediction only]; Region: COG2819"
+ /db_xref="CDD:225375"
+ gene 2278960..2281215
+ /locus_tag="SARI_02351"
+ CDS 2278960..2281215
+ /locus_tag="SARI_02351"
+ /inference="protein motif:HMMPfam:IPR000531"
+ /inference="protein motif:HMMPfam:IPR012910"
+ /inference="protein motif:HMMTigr:IPR010105"
+ /inference="protein motif:ScanRegExp:IPR010916"
+ /note="Fep; Cbt; Cbr; FeuB; FepA; PfeA; IroN; BfeA; outer
+ membrane receptor of ferric enterobactin and colicins B
+ and D; interacts with the TonB-ExbBD complex which
+ catalyzes the translocation of the siderophore to the
+ periplasmic space"
+ /codon_start=1
+ /transl_table=11
+ /product="outer membrane receptor FepA"
+ /protein_id="YP_001571356.1"
+ /db_xref="GI:161504244"
+ /db_xref="InterPro:IPR000531"
+ /db_xref="InterPro:IPR010105"
+ /db_xref="InterPro:IPR010916"
+ /db_xref="InterPro:IPR012910"
+ /translation="MNKKIHSLALLVNLGIYGAALPVMAEEKTDSAALTNEDTIVVTA
+ AQQNLQASGVSTITADEIRKNPPARDVSEIIRTMPGVNLTGNSTSGQRGNNRQIDIRG
+ MGPENTLILIDGKPVTSRNSVRLGWRGERDTRGDTAWVPPEMIERIEVLRGPAAARYG
+ NGAAGGVVNIITKKGGSEWHGSWNTYFNAPEHKDEGATKRTNFSLNGPLGGDFSFRLY
+ GNLDKTQADARNINQGHQSERTGSYADTLPAGREGVINKDINGVVRWDFAPLQSLELE
+ AGYSRQGNLYAGDTQNTNTNQLVKDNYGKETNRIYRQNYSLTWNGGWDNGVTTSNWVQ
+ YEHTRNSRMPEGLAGGTEGIFDPKASQKYTDADLNDVTLHSEVSLPFDLLVNQNLTLG
+ TEWAQQRMKDMLSNSQTFMGGNIPGYSSTDRSPYSKAEIFSLFAENNMELTDSTMLTP
+ GLRFDHHSIVGNNWSPSLNLSQGLGDDFTLKMGIARAYKAPSLYQTNPNYILYSKGQG
+ CYATGAGTGIGCYMMGNDELKAETSINKEIGLEFKRDGWLAGVTWFRNDYRNKIEAGK
+ VPLQRINNGKTDVYQWENVPKAVVEGLEGTLNVPVSDTVNWTNNVTYMLQSKNKETGE
+ RLSIIPQYTLNSTLSWQVRQDVSLQSTFTWYGKQEPKKYDYQGKPVTGTDKQSVSPYS
+ IVGLSATWDVTKNVSLTGGVDNLFDKRLWREGNAQTVRDTKTGAYMAGAGAYTYNEPG
+ RTWYMSINTHF"
+ misc_feature 2278960..2281212
+ /locus_tag="SARI_02351"
+ /note="outer membrane receptor FepA; Provisional; Region:
+ PRK13524"
+ /db_xref="CDD:237410"
+ misc_feature 2279116..2281212
+ /locus_tag="SARI_02351"
+ /note="TonB dependent/Ligand-Gated channels are created by
+ a monomeric 22 strand (22,24) anti-parallel beta-barrel.
+ Ligands apparently bind to the large extracellular loops.
+ The N-terminal 150-200 residues form a plug from the
+ periplasmic end of barrel; Region: ligand_gated_channel;
+ cd01347"
+ /db_xref="CDD:238657"
+ misc_feature order(2279116..2279145,2279176..2279205,2279251..2279268,
+ 2279287..2279310,2279383..2279415,2279449..2279475)
+ /locus_tag="SARI_02351"
+ /note="N-terminal plug; other site"
+ /db_xref="CDD:238657"
+ misc_feature order(2279977..2279979,2280055..2280057)
+ /locus_tag="SARI_02351"
+ /note="ligand-binding site [chemical binding]; other site"
+ /db_xref="CDD:238657"
+ gene 2281215..2281904
+ /locus_tag="SARI_02352"
+ CDS 2281215..2281904
+ /locus_tag="SARI_02352"
+ /inference="protein motif:HMMPfam:IPR008278"
+ /inference="protein motif:superfamily:IPR008278"
+ /inference="similar to AA sequence:REFSEQ:YP_215602.1"
+ /note="'KEGG: sec:SC0615 1.1e-93 entD; enterochelin
+ synthetase, component D (phoshpantetheinyltransferase)
+ K02362;
+ COG: COG2977 Phosphopantetheinyl transferase component of
+ siderophore synthetase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphopantetheinyltransferase component of
+ enterobactin synthase multienzyme complex"
+ /protein_id="YP_001571357.1"
+ /db_xref="GI:161504245"
+ /db_xref="InterPro:IPR008278"
+ /translation="MPTFPPSFGGGSLKEIMLTSHFSLPFAEHTLHIVDFDASSFHEN
+ DLLWLPHHERLRSAGRKRKAEHLAGRIAAVHALCGIGIRTVPGIGDKRQPLWPDGVFG
+ SISHCASTALAVISRQRVGVDIEKIMSQQTATDLAPAIIDNDERQILKASSLPFPLAL
+ TLAFSAKESVYKAFSGNATLPGFDSAKITSLTATQISLNLLPAFAATTAERDVRIRWF
+ QRDNRVITLCS"
+ misc_feature 2281254..2281901
+ /locus_tag="SARI_02352"
+ /note="phosphopantetheinyltransferase component of
+ enterobactin synthase multienzyme complex; Provisional;
+ Region: PRK10251"
+ /db_xref="CDD:182334"
+ misc_feature 2281569..>2281736
+ /locus_tag="SARI_02352"
+ /note="4'-phosphopantetheinyl transferase
+ superfamily; Region: ACPS; pfam01648"
+ /db_xref="CDD:216625"
+ gene complement(2281806..2282000)
+ /locus_tag="SARI_02354"
+ CDS complement(2281806..2282000)
+ /locus_tag="SARI_02354"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571358.1"
+ /db_xref="GI:161504247"
+ /translation="MKIIQRHSDLIYRGIALSIEAGTRLSWRRGVISGAKGNNTIITL
+ KPPYPDITFSRRGGKGWQEI"
+ gene 2281980..2283098
+ /locus_tag="SARI_02353"
+ CDS 2281980..2283098
+ /locus_tag="SARI_02353"
+ /inference="protein motif:HMMPfam:IPR006336"
+ /inference="protein motif:HMMTigr:IPR011793"
+ /inference="similar to AA sequence:REFSEQ:NP_455160.1"
+ /note="ATP-dependent; carboxylate-amine ligase with weak
+ glutamate--cysteine ligase activity"
+ /codon_start=1
+ /transl_table=11
+ /product="carboxylate-amine ligase"
+ /protein_id="YP_001571359.1"
+ /db_xref="GI:161504246"
+ /db_xref="InterPro:IPR006336"
+ /db_xref="InterPro:IPR011793"
+ /translation="MPLNDFHVSEPYTLGIELEMQVINPPGYDLSQDSSTLIDAVKPQ
+ LTAGEIKHDITESMLEMATGVCRDIDQVAAQLSAMQHVILQAASEHHLGICGGGTHPF
+ QKWQRQEVCDNERYQRTLENFGYLIQQATVFGQHVHVGCANGDDAIYLLHGLSHFVPH
+ FIALSAASPYMQGSDTRFACARLNIFSAFPDNGPMPWVSNWQEFAGLFRRLSYTAMID
+ SIKDLHWDIRPSPDFGTVEVRVMDTPLTLDQAINMAGLIQATAHWLLTERPFKPQEQD
+ YLLYKFNRFQACRYGLEGMLTDVYTGDRRRLADDTLRLLDNVTPSARKVGADSAIDAL
+ RLQVKKGGNEAQYMREFIADGGSLIGLVQKHCEIWAGQ"
+ misc_feature 2281980..2283095
+ /locus_tag="SARI_02353"
+ /note="gamma-glutamyl:cysteine ligase; Provisional;
+ Region: PRK13516"
+ /db_xref="CDD:237407"
+ misc_feature 2282016..2282870
+ /locus_tag="SARI_02353"
+ /note="carboxylate-amine ligase, YbdK family; Region:
+ gshA_cyan_rel; TIGR02050"
+ /db_xref="CDD:233699"
+ gene 2283165..2283413
+ /locus_tag="SARI_02355"
+ CDS 2283165..2283413
+ /locus_tag="SARI_02355"
+ /inference="protein motif:HMMPfam:IPR010590"
+ /inference="similar to AA sequence:INSD:AAL19533.1"
+ /note="'COG: NOG15356 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571360.1"
+ /db_xref="GI:161504248"
+ /db_xref="InterPro:IPR010590"
+ /translation="MQYPLESLMTAAGILLMAFLSSLLLPAPSLGLALAQKLVGLFHL
+ MDLNQLYTLLFCLWFLLLGALEYCVIRFIWRRWFALAD"
+ misc_feature 2283165..2283410
+ /locus_tag="SARI_02355"
+ /note="Protein of unknown function (DUF1158); Region:
+ DUF1158; pfam06643"
+ /db_xref="CDD:148319"
+ gene complement(2283379..2283807)
+ /locus_tag="SARI_02356"
+ CDS complement(2283379..2283807)
+ /locus_tag="SARI_02356"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR000005"
+ /inference="protein motif:HMMSmart:IPR000005"
+ /inference="protein motif:ScanRegExp:IPR000005"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:REFSEQ:YP_151357.1"
+ /note="'KEGG: bcz:BCZK3497 4.0e-09 adaA; transcriptional
+ regulator, AraC family K00567;
+ COG: COG2207 AraC-type DNA-binding domain-containing
+ proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571361.1"
+ /db_xref="GI:161504249"
+ /db_xref="InterPro:IPR000005"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /translation="MYGVGAVDEFDRGESTMTISAQVIDTIVEWIDDNLNQPLRIDDI
+ ARHAGYSKWHLQRLFMQYKGESLGRYVRERKLKLAARDLRDTDQKVYDICLKYGFDSQ
+ QTFTRIFTRTFNLPPGAYRKEKHGARIEMLNRPAQTSAAR"
+ misc_feature complement(2283445..2283744)
+ /locus_tag="SARI_02356"
+ /note="DNA-binding transcriptional regulator SoxS;
+ Provisional; Region: PRK10219"
+ /db_xref="CDD:182314"
+ misc_feature complement(2283592..2283717)
+ /locus_tag="SARI_02356"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ gene 2284049..2284630
+ /locus_tag="SARI_02357"
+ CDS 2284049..2284630
+ /locus_tag="SARI_02357"
+ /inference="protein motif:FPrintScan:IPR001647"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR001647"
+ /inference="protein motif:ScanRegExp:IPR001647"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:INSD:CAD05056.1"
+ /note="'COG: COG1309 Transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571362.1"
+ /db_xref="GI:161504250"
+ /db_xref="InterPro:IPR001647"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /translation="MARPKSEDKKQALLEAATQAIAQSGIAASTAAIARNAGVAEGTL
+ FRYFATKDELINTLYLHLKQDLCQSMIMELDRSITDAKTMTRFIWNSYINWGLNHPAR
+ HRAIRQLAVSEKITKETEKLADDMFPELRDLCHRSVLMVFMSDEYRAFGDGLFLALAE
+ TTMDFATRDPARAGEFIALGFEAMWRALTREEQ"
+ misc_feature 2284151..2284618
+ /locus_tag="SARI_02357"
+ /note="Transcriptional regulator [Transcription]; Region:
+ AcrR; COG1309"
+ /db_xref="CDD:224228"
+ misc_feature <2284151..2284222
+ /locus_tag="SARI_02357"
+ /note="Bacterial regulatory proteins, tetR family; Region:
+ TetR_N; pfam00440"
+ /db_xref="CDD:201228"
+ gene 2284630..2284998
+ /locus_tag="SARI_02358"
+ CDS 2284630..2284998
+ /locus_tag="SARI_02358"
+ /inference="protein motif:HMMPfam:IPR007351"
+ /inference="similar to AA sequence:REFSEQ:YP_151359.1"
+ /note="'COG: COG2315 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571363.1"
+ /db_xref="GI:161504251"
+ /db_xref="InterPro:IPR007351"
+ /translation="MDGQTLHACAKRFALERPFTEHCWPFGPQYDVFKVGGKIFMLFT
+ EHRCRPLVNLKADPQKSLVNQQIYRSITPGYHMNKKHWISVYAGEDITVSLLNDLIND
+ SWNLVVDSLPKRDQQRLRPR"
+ misc_feature 2284630..2284995
+ /locus_tag="SARI_02358"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10250"
+ /db_xref="CDD:182333"
+ gene 2285101..2285754
+ /locus_tag="SARI_02359"
+ CDS 2285101..2285754
+ /locus_tag="SARI_02359"
+ /inference="protein motif:HMMPfam:IPR000415"
+ /inference="similar to AA sequence:INSD:AAL19529.1"
+ /note="'catalyzes the reduction of nitroaromatic compounds
+ such as nitrofurazone, quinones and the anti-tumor agent
+ CB1954; NAD(P)H-dependent; oxygen insensitive'"
+ /codon_start=1
+ /transl_table=11
+ /product="dihydropteridine reductase"
+ /protein_id="YP_001571364.1"
+ /db_xref="GI:161504252"
+ /db_xref="InterPro:IPR000415"
+ /translation="MDIVSVALKRYSTKAFDPSKKLTAEEADKLKTLLQYSPSSTNSQ
+ PWHFIVASTEEGKARVAKSAAANYMFNERKMLDASHVVVFCAKTAMDDAWLERVVDQE
+ EADGRFATPEAKAANDKGRRFFADMHRVSLKDDHQWMAKQVYLNVGNFLLGVAAMGLD
+ AVPIEGFDADVLDAEFGLKEKGYTSLVVVPVGHHSVEDFNAGLPKSRLPLETTLTEI"
+ misc_feature 2285104..2285733
+ /locus_tag="SARI_02359"
+ /note="NAD(P)H:FMN oxidoreductase family. This domain
+ catalyzes the reduction of flavin, nitrocompound, quinones
+ and azo compounds using NADH or NADPH as an electron
+ donor. The enzyme is a homodimer, and each monomer binds a
+ FMN as co-factor. This family...; Region:
+ NfsB_like_nitroreductase; cd02149"
+ /db_xref="CDD:239062"
+ misc_feature order(2285107..2285112,2285191..2285193,2285203..2285211,
+ 2285218..2285220,2285224..2285226,2285230..2285232,
+ 2285239..2285256,2285509..2285514,2285521..2285526,
+ 2285530..2285535,2285542..2285547,2285554..2285556,
+ 2285569..2285571,2285593..2285595,2285710..2285712,
+ 2285716..2285730)
+ /locus_tag="SARI_02359"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:239062"
+ misc_feature order(2285128..2285136,2285140..2285142,2285320..2285322,
+ 2285587..2285589,2285593..2285598,2285713..2285715,
+ 2285719..2285721)
+ /locus_tag="SARI_02359"
+ /note="FMN binding site [chemical binding]; other site"
+ /db_xref="CDD:239062"
+ gene 2285969..2286403
+ /locus_tag="SARI_02360"
+ CDS 2285969..2286403
+ /locus_tag="SARI_02360"
+ /inference="protein motif:Gene3D:IPR004701"
+ /inference="protein motif:HMMPfam:IPR004701"
+ /inference="protein motif:superfamily:IPR004701"
+ /inference="similar to AA sequence:REFSEQ:NP_459569.1"
+ /note="'KEGG: stm:STM0577 2.5e-71 putative PTS system,
+ mannose-specific II component K02793;
+ COG: COG2893 Phosphotransferase system,
+ mannose/fructose-specific component IIA;
+ Psort location: endoplasmic reticulum, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571365.1"
+ /db_xref="GI:161504253"
+ /db_xref="InterPro:IPR004701"
+ /translation="MASHGPFARGLINSLSLLIGDEHGVTPVCAYDGDIVTTEQLEQT
+ LENLIAQANGEEVVVFTDLLGGSINNSAAKVLMRHRHVFVVAGVNMTLLLEFLLCEEE
+ STDAAITYATNAARESIVFINTLITQPSADLQGESHDQISAH"
+ misc_feature 2285972..2286319
+ /locus_tag="SARI_02360"
+ /note="PTS_IIA, PTS system, mannose/sorbose specific IIA
+ subunit. The bacterial phosphoenolpyruvate: sugar
+ phosphotransferase system (PTS) is a multi-protein system
+ involved in the regulation of a variety of metabolic and
+ transcriptional processes. This family...; Region:
+ PTS_IIA_man; cd00006"
+ /db_xref="CDD:237978"
+ misc_feature order(2285978..2285980,2286020..2286025,2286056..2286058,
+ 2286167..2286169,2286254..2286256)
+ /locus_tag="SARI_02360"
+ /note="active pocket/dimerization site; other site"
+ /db_xref="CDD:237978"
+ misc_feature order(2285978..2285980,2286152..2286154,2286167..2286169)
+ /locus_tag="SARI_02360"
+ /note="active site"
+ /db_xref="CDD:237978"
+ misc_feature 2285978..2285980
+ /locus_tag="SARI_02360"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:237978"
+ gene 2286381..2286851
+ /locus_tag="SARI_02361"
+ CDS 2286381..2286851
+ /locus_tag="SARI_02361"
+ /inference="protein motif:BlastProDom:IPR004720"
+ /inference="protein motif:Gene3D:IPR004720"
+ /inference="protein motif:HMMPfam:IPR004720"
+ /inference="protein motif:superfamily:IPR004720"
+ /inference="similar to AA sequence:REFSEQ:NP_459568.1"
+ /note="'KEGG: stm:STM0576 3.9e-75 putative PTS system,
+ mannose-specific II component K02794;
+ COG: COG3444 Phosphotransferase system,
+ mannose/fructose/N-acetylgalactosamine-specific component
+ IIB;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571366.1"
+ /db_xref="GI:161504254"
+ /db_xref="InterPro:IPR004720"
+ /translation="MIKLVRIDYRLLHGQVVFAWTRALDIDHIIVANANAAGDAFVSM
+ SLSLAKPAGVSLDIITVEQAAEKLASGKLDHKKVMVVLGNTAETLAFAEKVPGINVIN
+ YGGIAQKEGAQQFGKAIYLTEQEIADSQALKAKGIRLEMRQVPAHSAELLNDKL"
+ misc_feature 2286384..2286836
+ /locus_tag="SARI_02361"
+ /note="PTS_IIB, PTS system, Mannose/sorbose specific IIB
+ subunit. The bacterial phosphoenolpyruvate: sugar
+ phosphotransferase system (PTS) is a multi-protein system
+ involved in the regulation of a variety of metabolic and
+ transcriptional processes. This family...; Region:
+ PTS_IIB_man; cd00001"
+ /db_xref="CDD:237975"
+ misc_feature order(2286396..2286398,2286408..2286410,2286417..2286419)
+ /locus_tag="SARI_02361"
+ /note="active site"
+ /db_xref="CDD:237975"
+ misc_feature 2286417..2286419
+ /locus_tag="SARI_02361"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:237975"
+ gene 2286866..2287609
+ /locus_tag="SARI_02362"
+ CDS 2286866..2287609
+ /locus_tag="SARI_02362"
+ /inference="protein motif:HMMPfam:IPR004700"
+ /inference="similar to AA sequence:INSD:AAL19526.1"
+ /note="'KEGG: eci:UTI89_C2015 1.3e-35 manY; PTS enzyme
+ IIC, mannose-specific K02795;
+ COG: COG3715 Phosphotransferase system,
+ mannose/fructose/N-acetylgalactosamine-specific component
+ IIC;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571367.1"
+ /db_xref="GI:161504255"
+ /db_xref="InterPro:IPR004700"
+ /translation="MLLTATLLGLIAALGILDGRLLGVSMIDRPLVMCALTGLVCGNL
+ HEGILIGATLELIFLGNVAIGAAVPPDVVTGSVLATAFSIMSGRGPEAALTIAIPISM
+ LAQTLGVLVRVVNARFGHMADRYAAQGNTRMVAVMHLGGPTLLYFLSGFLPVFFAILL
+ GSAAVTWFLDAIPAFITNGLVVASKILPALGFALLISMMLSSKLMPYLGLGFLIAAYT
+ KLDIIAIALFAVVLAFIISQFLNTSQQEG"
+ misc_feature 2286935..2287528
+ /locus_tag="SARI_02362"
+ /note="Phosphotransferase system,
+ mannose/fructose/N-acetylgalactosamine-specific component
+ IIC [Carbohydrate transport and metabolism]; Region: ManY;
+ COG3715"
+ /db_xref="CDD:226238"
+ gene 2287612..2288466
+ /locus_tag="SARI_02363"
+ CDS 2287612..2288466
+ /locus_tag="SARI_02363"
+ /inference="protein motif:HMMPfam:IPR004704"
+ /inference="similar to AA sequence:REFSEQ:NP_459566.1"
+ /note="'KEGG: hso:HS_0607 1.4e-52 manZ;
+ protein-N(pi)-phosphohistidine-sugar phosphotransferase
+ (mannose-specific phosphotransferase system IID component)
+ K02796;
+ COG: COG3716 Phosphotransferase system,
+ mannose/fructose/N-acetylgalactosamine-specific component
+ IID;
+ Psort location: vacuolar, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571368.1"
+ /db_xref="GI:161504256"
+ /db_xref="InterPro:IPR004704"
+ /translation="MSEVTQTLIDDAQAHSQSESRITARDLRSVFWRSFTLQGSWNYE
+ RQQHMGYAFAMSPALKRIYQDPAELGRALQRHLVLFNTTPHLSTFVFGLSIAMEEENQ
+ RNPDFNEESINAVKTSLMGPLAGIGDSIFWGSLKVIAAGMGIYFAQQGSILGPILALL
+ VYNIPHILCRWYALKLGYRAGTTWLMRIWQSGLMDRVTYIASIVGLMVVGAMTASMID
+ ITTPLSFTAGQTTMKVQDFIDKILPSLLPLLFTLGMYKLIRKGVNINWILLGTVAFGL
+ LASALGLL"
+ misc_feature 2287657..2288433
+ /locus_tag="SARI_02363"
+ /note="Phosphotransferase system,
+ mannose/fructose/N-acetylgalactosamine-specific component
+ IID [Carbohydrate transport and metabolism]; Region: ManZ;
+ COG3716"
+ /db_xref="CDD:226239"
+ gene 2288481..2289542
+ /locus_tag="SARI_02364"
+ CDS 2288481..2289542
+ /locus_tag="SARI_02364"
+ /inference="protein motif:HMMPfam:IPR001347"
+ /inference="similar to AA sequence:INSD:AAL19524.1"
+ /note="'KEGG: lwe:lwe2019 1.3e-28
+ glucosamine--fructose-6-phosphate aminotransferase ,
+ putative K00820;
+ COG: COG0449 Glucosamine 6-phosphate synthetase, contains
+ amidotransferase and phosphosugar isomerase domains;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571369.1"
+ /db_xref="GI:161504257"
+ /db_xref="InterPro:IPR001347"
+ /translation="MQVEDYMNETPLRLLEMLTQTREDLWRAAQALTERGVTRIILTG
+ SGTSYHGALTARAFMQRWCALPVDVCWPFMLDNETLARSGKALVVGISQGGGSLSTLA
+ GMERARDIGHITASMAGVAPATIDRAADYILTVPCGEETAGAKTKGYHCTVLNLMLLA
+ LAVAGQQQRLNGEQRRSLLLRMEKTFNHLPALITASQAWTQTNALALRDSADIRLTGP
+ ATLFGTVQEGALKMLETLRCPVSGYEFEEFIHGIYNAFNAQSALIMLDPQPDARQDRL
+ AQILGDWTPSIYRIGPQVENNGLNLNFPFVNDEDFAVFEYIIPLQMLCAILPPQKGIN
+ PAIPKDPQFHQKMKSKQEM"
+ misc_feature 2288499..2289494
+ /locus_tag="SARI_02364"
+ /note="Predicted phosphosugar isomerases [Cell envelope
+ biogenesis, outer membrane]; Region: AgaS; COG2222"
+ /db_xref="CDD:225132"
+ misc_feature 2288595..2288936
+ /locus_tag="SARI_02364"
+ /note="SIS (Sugar ISomerase) domain repeat 1 found in
+ Glucosamine 6-phosphate synthase (GlmS) and
+ Glucosamine-6-phosphate deaminase (GlmD). The SIS domain
+ is found in many phosphosugar isomerases and phosphosugar
+ binding proteins. GlmS contains a N-terminal...; Region:
+ SIS_GlmS_GlmD_1; cd05008"
+ /db_xref="CDD:240141"
+ misc_feature order(2288613..2288618,2288646..2288651,2288658..2288663,
+ 2288682..2288684,2288688..2288690,2288700..2288702,
+ 2288709..2288711,2288775..2288777)
+ /locus_tag="SARI_02364"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:240141"
+ misc_feature order(2288619..2288624,2288754..2288762)
+ /locus_tag="SARI_02364"
+ /note="active site"
+ /db_xref="CDD:240141"
+ misc_feature 2289099..2289518
+ /locus_tag="SARI_02364"
+ /note="SIS (Sugar ISomerase) domain repeat 2 found in
+ Glucosamine 6-phosphate synthase (GlmS) and
+ Glucosamine-6-phosphate deaminase (GlmD). The SIS domain
+ is found in many phosphosugar isomerases and phosphosugar
+ binding proteins. GlmS contains a N-terminal...; Region:
+ SIS_GlmS_GlmD_2; cd05009"
+ /db_xref="CDD:240142"
+ misc_feature order(2289135..2289137,2289177..2289179,2289189..2289191,
+ 2289195..2289197,2289201..2289203,2289207..2289209,
+ 2289219..2289221,2289225..2289233,2289237..2289248,
+ 2289297..2289299,2289306..2289308,2289312..2289317,
+ 2289495..2289500,2289513..2289515)
+ /locus_tag="SARI_02364"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:240142"
+ misc_feature order(2289171..2289173,2289180..2289182)
+ /locus_tag="SARI_02364"
+ /note="active site"
+ /db_xref="CDD:240142"
+ gene 2289552..2290595
+ /locus_tag="SARI_02365"
+ CDS 2289552..2290595
+ /locus_tag="SARI_02365"
+ /inference="protein motif:HMMPfam:IPR001347"
+ /inference="similar to AA sequence:INSD:AAL19523.1"
+ /note="'KEGG: eco:b3371 2.7e-26 frlB, yhfN;
+ fructoselysine-6-P-deglycase;
+ COG: COG2222 Predicted phosphosugar isomerases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571370.1"
+ /db_xref="GI:161504258"
+ /db_xref="InterPro:IPR001347"
+ /translation="MLVIIRAVAEDALHAKEINMSVAHGNARRIISDILGKQNIERVW
+ FVGCGGSLTGFWPGKYFLDCEASKLAVGYITSNEFVHATPKALGKNSVVILASQQGNT
+ AETVAAARVAREKGAATIGLVYQPDTPLCEYSDYIIEYQWARYPETVDPAQQKAAYSL
+ WLALEILAQTEGYAQYDELVSAFGRFSDVVHGAQRQVQEDARRFAAEWKDEKVVYMMG
+ SGPSFGAAHQESICILLEMQWINSASIHSGEYFHGPFEITEPGTPFILLQSSGRTRPL
+ DDRAIRFIERYQGKLQLIDADKLGIQDLPTDVGEYFCGLLHNCVLDVYNLALATARNH
+ PLTTRRYMWKVEY"
+ misc_feature 2289639..2290592
+ /locus_tag="SARI_02365"
+ /note="Predicted phosphosugar isomerases [Cell envelope
+ biogenesis, outer membrane]; Region: AgaS; COG2222"
+ /db_xref="CDD:225132"
+ misc_feature 2289675..2290052
+ /locus_tag="SARI_02365"
+ /note="A subgroup of the SIS domain. SIS (Sugar ISomerase)
+ domains are found in many phosphosugar isomerases and
+ phosphosugar binding proteins. SIS domains are also found
+ in proteins that regulate the expression of genes involved
+ in synthesis of phosphosugars; Region: SIS_1; cd05710"
+ /db_xref="CDD:240214"
+ misc_feature order(2289702..2289704,2289840..2289842)
+ /locus_tag="SARI_02365"
+ /note="putative active site [active]"
+ /db_xref="CDD:240214"
+ misc_feature 2290146..2290589
+ /locus_tag="SARI_02365"
+ /note="SIS (Sugar ISomerase) domain repeat 2 found in
+ Glucosamine 6-phosphate synthase (GlmS) and
+ Glucosamine-6-phosphate deaminase (GlmD). The SIS domain
+ is found in many phosphosugar isomerases and phosphosugar
+ binding proteins. GlmS contains a N-terminal...; Region:
+ SIS_GlmS_GlmD_2; cd05009"
+ /db_xref="CDD:240142"
+ misc_feature order(2290209..2290211,2290254..2290256,2290266..2290268,
+ 2290272..2290274,2290278..2290280,2290284..2290286,
+ 2290296..2290298,2290302..2290310,2290314..2290325,
+ 2290374..2290379,2290389..2290391,2290395..2290400,
+ 2290566..2290571,2290584..2290586)
+ /locus_tag="SARI_02365"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:240142"
+ misc_feature order(2290248..2290250,2290257..2290259)
+ /locus_tag="SARI_02365"
+ /note="active site"
+ /db_xref="CDD:240142"
+ gene complement(2290723..2293452)
+ /locus_tag="SARI_02366"
+ CDS complement(2290723..2293452)
+ /locus_tag="SARI_02366"
+ /inference="protein motif:Gene3D:IPR004701"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR002078"
+ /inference="protein motif:HMMPfam:IPR011608"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR002464"
+ /inference="protein motif:superfamily:IPR004701"
+ /note="'KEGG: reh:H16_A0728 3.2e-18 response regulator
+ containing CheY-like receiver, AAA-type ATPase, and
+ DNA-binding domains K01529;
+ COG: COG3933 Transcriptional antiterminator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571371.1"
+ /db_xref="GI:161504259"
+ /db_xref="InterPro:IPR002078"
+ /db_xref="InterPro:IPR002464"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR004701"
+ /db_xref="InterPro:IPR011608"
+ /db_xref="InterPro:IPR011991"
+ /translation="MNKESIFRQLELRLAGCSLTADALSGFSAMAIADSLRQKRSIIS
+ HHLNNLHREQRVVKVNSRPVLFLPVEALRRHHRLAVRQGDYASIQALCAERQDSLELL
+ IGAQGSLQESLRQCKAAISYPGAGLPLLLRGPTGTGKSFLARQLWQYAIEQGILPPEA
+ PFTVFNCAEYANNPELLTSKLFGHAKGAFTGADRAVSGLIETSNGGVLFIDEVHRLPP
+ EGQEKLFHFMDNGTWRRLGESSDERSATVRLIFASTEDLEKHFLATFIRRIPVIVKIL
+ PIAERGQYERLAFIHHFFRREAQRLHHDLSLDSEIISQLMQETLEGNVGGLENLIRNI
+ CASAWTFGQRDDGVLEVKAGQLPDRLLMEVPFTVPQTAERVMIYREGGVFPRVSGQHQ
+ EYLRLTENICGLCEELAQENISARTFDKLVYQNLTLYLDALMNKESPRARQDKRLRFI
+ EDVGKAIAAHYDLELNAEFAYLTGRYLTSLPLTPVEASPSVRHVMLRWLEEAPGLAQR
+ VAQKLLDVVNNKYDLLIDTLDRLVVAAIVSNAIDATSGGKVKALIIAHGYSTASSIAG
+ VANRLIGEKIYHAMDMPMEVAFSDVSRAIVDYLQHTDTRAGVMVLIDMGYTKEIADAL
+ LSVIHGPLVVVDNVTTRLALNVASEIALQKNIEQIAEEIVPLNQSRWDVFWPAQKKAR
+ ALLVTCITGIGTAFKFKNLMEKSQLTDFDINIIACEYTRLKNSRMATSLLNQYEVIAV
+ VGTIDPQLAGVPWVGIEELLGEQGYAHLSQLLSGYLNDKQIALINKNMVREFSLHNVV
+ NSLTILNANKTIGHIETIIAEWQNTLGFSFNNNLIISLYVHLSCMIERLVMRNEITHY
+ KNMTEFNERHGEFIAMVNHSFQRLKILYNVALPVAEIGYIHDIFELRIEDFRW"
+ misc_feature complement(2292097..2293389)
+ /locus_tag="SARI_02366"
+ /note="Transcriptional regulators containing an AAA-type
+ ATPase domain and a DNA-binding domain [Transcription /
+ Signal transduction mechanisms]; Region: PspF; COG1221"
+ /db_xref="CDD:224142"
+ misc_feature complement(2292628..>2293038)
+ /locus_tag="SARI_02366"
+ /note="The AAA+ (ATPases Associated with a wide variety of
+ cellular Activities) superfamily represents an ancient
+ group of ATPases belonging to the ASCE (for additional
+ strand, catalytic E) division of the P-loop NTPase fold.
+ The ASCE division also includes ABC; Region: AAA; cd00009"
+ /db_xref="CDD:99707"
+ misc_feature complement(order(2292691..2292693,2292820..2292822,
+ 2293030..2293038))
+ /locus_tag="SARI_02366"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(2292817..2292834)
+ /locus_tag="SARI_02366"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(2292649..2292651)
+ /locus_tag="SARI_02366"
+ /note="arginine finger; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(2290726..2292123)
+ /locus_tag="SARI_02366"
+ /note="Transcriptional antiterminator [Transcription];
+ Region: COG3933"
+ /db_xref="CDD:226443"
+ misc_feature complement(2291446..2291808)
+ /locus_tag="SARI_02366"
+ /note="PTS_IIA, PTS system, mannose/sorbose specific IIA
+ subunit. The bacterial phosphoenolpyruvate: sugar
+ phosphotransferase system (PTS) is a multi-protein system
+ involved in the regulation of a variety of metabolic and
+ transcriptional processes. This family...; Region:
+ PTS_IIA_man; cd00006"
+ /db_xref="CDD:237978"
+ misc_feature complement(order(2291509..2291511,2291602..2291604,
+ 2291707..2291709,2291737..2291742,2291785..2291787))
+ /locus_tag="SARI_02366"
+ /note="active pocket/dimerization site; other site"
+ /db_xref="CDD:237978"
+ misc_feature complement(order(2291602..2291604,2291614..2291616,
+ 2291785..2291787))
+ /locus_tag="SARI_02366"
+ /note="active site"
+ /db_xref="CDD:237978"
+ misc_feature complement(2291785..2291787)
+ /locus_tag="SARI_02366"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:237978"
+ misc_feature complement(2290750..2291013)
+ /locus_tag="SARI_02366"
+ /note="PRD domain; Region: PRD; pfam00874"
+ /db_xref="CDD:201484"
+ gene complement(2293619..2295640)
+ /locus_tag="SARI_02367"
+ CDS complement(2293619..2295640)
+ /locus_tag="SARI_02367"
+ /inference="protein motif:HMMPfam:IPR001087"
+ /inference="protein motif:HMMPfam:IPR005546"
+ /inference="protein motif:HMMTigr:IPR006315"
+ /inference="protein motif:superfamily:IPR013830"
+ /note="'KEGG: pen:PSEEN0445 2.4e-24 estA; esterase EstA
+ precursor K01044;
+ COG: COG3240 Phospholipase/leciTHInase/hemolysin;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571372.1"
+ /db_xref="GI:161504260"
+ /db_xref="InterPro:IPR001087"
+ /db_xref="InterPro:IPR005546"
+ /db_xref="InterPro:IPR006315"
+ /db_xref="InterPro:IPR013830"
+ /translation="MMICTVVPTNNNTKEHEMTRKRTLVKHHILSLALTTPLSVYAFD
+ SLTVFGDSLSDTGNNGRWTWDSSQNYLYDEQLADRYGLALSPSSKGGSNYAAGGATAT
+ SELNPQDNTADQVRQWLAKTGGKADRNGLYIHWVGGNDLAAAIAQPVMARQIADNSAI
+ NAAAQVGLLLGAGAGLVVVPNVPDISATPMLLEAVITAGLGAAAPPALKAALDALAAG
+ STPDSASRQQAIREALLAAAATVSSDPSIQQQLVEQLLAGYETAAGQASSLTDYYNQT
+ EEKGLEQHGGNIARADINGLFKEILDNPQAFGLTNTVGMACPLGVSASACSSAMPGFN
+ ASQNYLFADHLHPGPQVHTIIAQYIQSIIAAPVQATYLNQSVQSMAQGSRTTLNSRYQ
+ QLRQGENPVGSLGMFGGYSGGYQRYDNNEAEGHGNHNNLTVGVDYQLNEQVLLGGLIA
+ GSLDKQRPDDNYHYDARSFQAAVFSHLRAGQAWLDGDLHYLTAKFSNIQRSITLGALR
+ RVEEGETNGRLWGARLTSGYDFVVMPWLTTGPMLQYAWDYSHVNGYSEKLNTSTSMRF
+ GDQNAHSQVGSAGWRLDLRDSVIHSWAQINYRRQFGDDTYVANGGLKTTALTFSRAGK
+ AQDKNWVDIEIGADFPLSAAVSGFVGVAQTAGLNDGNQTRYNVGFSAQF"
+ misc_feature complement(2294459..2295553)
+ /locus_tag="SARI_02367"
+ /note="Phospholipase/lecithinase/hemolysin [Lipid
+ metabolism / General function prediction only]; Region:
+ COG3240"
+ /db_xref="CDD:225780"
+ misc_feature complement(<2295074..2295508)
+ /locus_tag="SARI_02367"
+ /note="SGNH_hydrolase, or GDSL_hydrolase, is a diverse
+ family of lipases and esterases. The tertiary fold of the
+ enzyme is substantially different from that of the
+ alpha/beta hydrolase family and unique among all known
+ hydrolases; its active site closely...; Region:
+ SGNH_hydrolase; cl01053"
+ /db_xref="CDD:242274"
+ misc_feature complement(order(2295224..2295226,2295347..2295349,
+ 2295485..2295487))
+ /locus_tag="SARI_02367"
+ /note="active site"
+ /db_xref="CDD:238141"
+ misc_feature complement(order(2295224..2295226,2295347..2295349,
+ 2295485..2295487))
+ /locus_tag="SARI_02367"
+ /note="oxyanion hole [active]"
+ /db_xref="CDD:238141"
+ misc_feature complement(2294582..>2294857)
+ /locus_tag="SARI_02367"
+ /note="SGNH_hydrolase, or GDSL_hydrolase, is a diverse
+ family of lipases and esterases. The tertiary fold of the
+ enzyme is substantially different from that of the
+ alpha/beta hydrolase family and unique among all known
+ hydrolases; its active site closely...; Region:
+ SGNH_hydrolase; cl01053"
+ /db_xref="CDD:242274"
+ misc_feature complement(order(2294603..2294605,2294612..2294614))
+ /locus_tag="SARI_02367"
+ /note="catalytic triad [active]"
+ /db_xref="CDD:238141"
+ misc_feature complement(2293622..2294347)
+ /locus_tag="SARI_02367"
+ /note="Autotransporter protein or domain, integral
+ membrane beta-barrel involved in protein secretion [Cell
+ motility and secretion]; Region: COG5571"
+ /db_xref="CDD:227858"
+ gene 2295673..2295816
+ /locus_tag="SARI_02368"
+ CDS 2295673..2295816
+ /locus_tag="SARI_02368"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571373.1"
+ /db_xref="GI:161504261"
+ /translation="MIEIFHPLFTDWRLFKTGFRRKITALCGRWIKYSVWINPEALLP
+ VSC"
+ gene 2295899..2297146
+ /locus_tag="SARI_02369"
+ CDS 2295899..2297146
+ /locus_tag="SARI_02369"
+ /inference="protein motif:HMMPfam:IPR006685"
+ /inference="protein motif:superfamily:IPR010920"
+ /inference="protein motif:superfamily:IPR011066"
+ /inference="similar to AA sequence:INSD:AAV78050.1"
+ /note="'COG: COG0668 Small-conductance mechanosensitive
+ channel;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571374.1"
+ /db_xref="GI:161504262"
+ /db_xref="InterPro:IPR006685"
+ /db_xref="InterPro:IPR010920"
+ /db_xref="InterPro:IPR011066"
+ /translation="MQELISQVEDLAGIEMNHTTSLVVIFGIIFLTAVVVHIILHWIV
+ LRAFEKRASASSRLWLQIITQNKLFHRLAFTLQGIIVNIQAALWLQKGSEAADILTTC
+ AQLWIMTYALLSLFSLLDVIFNLSQKWPAASQLPLKGIFQGIKLIGAIIVGILMISLL
+ IGQSPAILISGLGAMAAVLMLVFKDPILGLVAGIQLSANDMLKLGDWLEMPKYGADGA
+ VIDIGLTTVKVRNWDNTITTIPTWSLVSDSFKNWSGMSASGGRRIKRSINIDATSIHF
+ LDDDEKQRLLTAHLLKPYLTSRHQEIDEWNKQLNAPESALNHRRMTNIGTFRAYLNEY
+ LRHHPRIRKDMTLMVRQLAPDDHGLPIEIYAFTNTVVWLEYESIQADIFDHIFAVVEE
+ FGLRIHQTPTGSDIRALSGALTH"
+ misc_feature 2296202..2297101
+ /locus_tag="SARI_02369"
+ /note="Small-conductance mechanosensitive channel [Cell
+ envelope biogenesis, outer membrane]; Region: MscS;
+ COG0668"
+ /db_xref="CDD:223740"
+ misc_feature 2296328..2297089
+ /locus_tag="SARI_02369"
+ /note="Mechanosensitive ion channel; Region: MS_channel;
+ pfam00924"
+ /db_xref="CDD:201506"
+ gene complement(2297187..2298581)
+ /locus_tag="SARI_02370"
+ CDS complement(2297187..2298581)
+ /locus_tag="SARI_02370"
+ /inference="protein motif:HMMPanther:IPR002293"
+ /inference="protein motif:HMMPfam:IPR004841"
+ /inference="protein motif:ScanRegExp:IPR004840"
+ /inference="similar to AA sequence:INSD:AAV78051.1"
+ /note="'KEGG: eci:UTI89_C0120 3.7e-157 aroP; aromatic
+ amino acid transport protein AroP K03293;
+ COG: COG1113 Gamma-aminobutyrate permease and related
+ permeases;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="phenylalanine transporter"
+ /protein_id="YP_001571375.1"
+ /db_xref="GI:161504263"
+ /db_xref="InterPro:IPR002293"
+ /db_xref="InterPro:IPR004840"
+ /db_xref="InterPro:IPR004841"
+ /translation="MKNASTASGASVSDAASKNEPTLQRGLQNRHIQLIALGGAIGTG
+ LFLGIGPAIQMAGPAVLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAWKYWGPF
+ AGFLSGWNYWVMFVLVGMAELTAAGIYMQYWLPDVPTWIWAAAFFIIINAVNLVNVRL
+ YGETEFWFALIKVLAIIGMIGFGLWLLFSGHGGEHASIDNLWRYNGFFATGWHGLLLS
+ LAVIMFSFGGLELIGITAAEARDPQKSIPKAVNQVVYRILLFYIGSLVVLLALYPWVE
+ VKSNSSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNSRMLFGLSIQGNAPK
+ FLTRVSHRGVPVNSLMLSGAITSLVVLINYLLPQKAFSLLMALVVATLLLNWIMICLA
+ HLRFRAAMRRQGRETQFKALLYPAGNYLCIAFLALILVLMCTIDDMRLSAILLPVWVV
+ FLFIAFNVLRRKAP"
+ misc_feature complement(2297196..2298581)
+ /locus_tag="SARI_02370"
+ /note="phenylalanine transporter; Provisional; Region:
+ PRK10249"
+ /db_xref="CDD:236667"
+ gene 2298907..2300082
+ /locus_tag="SARI_02371"
+ CDS 2298907..2300082
+ /locus_tag="SARI_02371"
+ /inference="protein motif:superfamily:IPR001623"
+ /inference="protein motif:superfamily:IPR011072"
+ /inference="similar to AA sequence:REFSEQ:YP_151364.1"
+ /note="'KEGG: dre:562769 9.7e-06 LOC562769; similar to
+ Serine/threonine-protein kinase 10 (Lymphocyte-oriented
+ kinase) K08837;
+ COG: COG1076 DnaJ-domain-containing proteins 1;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571376.1"
+ /db_xref="GI:161504264"
+ /db_xref="InterPro:IPR001623"
+ /db_xref="InterPro:IPR011072"
+ /translation="MNKIIKRLEIIKSAIELEDEEIIHQQLIYLKNEPQDAVISTIAE
+ AIEARRFSDAMQEISAWLQAQRALSTWQDPAIAASKLELKALEAQLRDLIDKRNARVQ
+ ILDDFNDLYHLRLGPLMSRILELRKQLAVSMQRKQEAEIKRREKDYQSCLQFISQAVD
+ QLATLKQQWIGLNAASRQAMGIRQRIQQQTELITALLAEIRELEADFSNQDDSASRQA
+ QEDAEQEYHQYQEQQQEAQFRYACDQRLSADERSELKRLWRQASRLCHPDVVADELKE
+ KAHQMMVQLNQARQNADLAAIRALLTQLQSGLEPMMASDRLNNLEHLRNKIRQLRTQI
+ DALLKEITQLETENAWRLASSVTDKEAYFSEQERALTEIRNTLEAQVQQVEQELLTG"
+ misc_feature 2299618..2300043
+ /locus_tag="SARI_02371"
+ /note="DnaJ-domain-containing proteins 1
+ [Posttranslational modification, protein turnover,
+ chaperones]; Region: DjlA; COG1076"
+ /db_xref="CDD:224002"
+ gene complement(2300173..2300733)
+ /locus_tag="SARI_02372"
+ CDS complement(2300173..2300733)
+ /locus_tag="SARI_02372"
+ /inference="protein motif:HMMPfam:IPR007339"
+ /inference="similar to AA sequence:INSD:AAV78053.1"
+ /note="'COG: COG3059 Predicted membrane protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571377.1"
+ /db_xref="GI:161504265"
+ /db_xref="InterPro:IPR007339"
+ /translation="MDKYLRLLSRGDRLGLTLIRLSIAIVFIWIGLLKFVPYEADSIT
+ PFVANSPFMSFFYEHPEEYRQHLTHEGELKPEERAWQTANNTYAFSDGLGVVELIIAA
+ LVLANPFSRWLGLAGGVLAFLTPFVTLSFLITTPEAWVMPLGDAHYGFPYLSGAGRLV
+ LKDTLMLAGAVMIMADSARSLLSQRQ"
+ misc_feature complement(2300176..2300733)
+ /locus_tag="SARI_02372"
+ /note="Predicted membrane protein [Function unknown];
+ Region: COG3059"
+ /db_xref="CDD:225601"
+ gene complement(2300745..2300981)
+ /locus_tag="SARI_02373"
+ CDS complement(2300745..2300981)
+ /locus_tag="SARI_02373"
+ /inference="protein motif:HMMPfam:IPR010854"
+ /inference="similar to AA sequence:INSD:AAO69898.1"
+ /note="'COG: NOG18530 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571378.1"
+ /db_xref="GI:161504266"
+ /db_xref="InterPro:IPR010854"
+ /translation="MLKITTLIASLLAAPLAFSASTQPLTHVEHISVSAVSATPSMLE
+ DAIARLAKSKHASSWKITSMRIDNTGYATAILYK"
+ misc_feature complement(2300748..2300909)
+ /locus_tag="SARI_02373"
+ /note="Protein of unknown function (DUF1471); Region:
+ DUF1471; pfam07338"
+ /db_xref="CDD:219380"
+ gene 2300993..2301118
+ /locus_tag="SARI_02374"
+ CDS 2300993..2301118
+ /locus_tag="SARI_02374"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571379.1"
+ /db_xref="GI:161504267"
+ /translation="MMGYFNGAIIRYSLQIPFLLDASIIVLAYFYGITGKKKSPD"
+ gene complement(2301140..2302465)
+ /locus_tag="SARI_02375"
+ CDS complement(2301140..2302465)
+ /locus_tag="SARI_02375"
+ /inference="protein motif:BlastProDom:IPR001327"
+ /inference="protein motif:Gene3D:IPR004099"
+ /inference="protein motif:HMMPfam:IPR001327"
+ /inference="protein motif:HMMPfam:IPR004099"
+ /inference="protein motif:HMMPfam:IPR013027"
+ /inference="protein motif:ScanRegExp:IPR012999"
+ /inference="similar to AA sequence:REFSEQ:NP_459556.1"
+ /note="Involved in disulfide oxidoreductase activity and
+ electron transport"
+ /codon_start=1
+ /transl_table=11
+ /product="pyridine nucleotide-disulfide oxidoreductase"
+ /protein_id="YP_001571380.1"
+ /db_xref="GI:161504268"
+ /db_xref="InterPro:IPR001327"
+ /db_xref="InterPro:IPR004099"
+ /db_xref="InterPro:IPR012999"
+ /db_xref="InterPro:IPR013027"
+ /translation="MTQYQALIIGFGKAGKTLAATLAKTGWRVAIIEQSASMFGGTCI
+ NIGCIPTKTLVHDAEREGDFSAAMQRKAAVVGFLRDKNFHNLADLDNVDVIEGRAEFV
+ DNQTLRVFQADGERVLRGEKIFINTGAESVIPAITGLTTTAGVFDSTGLLSMSQRPAR
+ LGILGGGYIGLEFASMFANFGTKVTIFEAAPQFLPREDRDIAQAIARILQEKGVELML
+ NASVQAVSSQEGVVQVETPEGAHLVDALLVASGRKPATAGLQLQNAGVAVNERGGIIV
+ DDYLRTTAENIWAMGDVTGGLQFTYISLDDFRIVRDGLLGEGKRSTRDRQNVPYSVFM
+ TPPLSRIGLTEEQARASGATVQVATLPVAAIPRARVMDDTRGVLKAVVDVNTQRILGV
+ SLLCVDSHETINIVKTVMDADLPYTVLRDQIFTHPTMSESLNDLFSLIK"
+ misc_feature complement(2301143..2302465)
+ /locus_tag="SARI_02375"
+ /note="pyridine nucleotide-disulfide oxidoreductase;
+ Provisional; Region: PRK08010"
+ /db_xref="CDD:181196"
+ misc_feature complement(2301758..2301952)
+ /locus_tag="SARI_02375"
+ /note="Pyridine nucleotide-disulphide oxidoreductase;
+ Region: Pyr_redox; pfam00070"
+ /db_xref="CDD:215691"
+ misc_feature complement(2301167..2301484)
+ /locus_tag="SARI_02375"
+ /note="Pyridine nucleotide-disulphide oxidoreductase,
+ dimerisation domain; Region: Pyr_redox_dim; pfam02852"
+ /db_xref="CDD:217252"
+ gene 2302681..2303535
+ /locus_tag="SARI_02376"
+ CDS 2302681..2303535
+ /locus_tag="SARI_02376"
+ /inference="protein motif:FPrintScan:IPR000005"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR000005"
+ /inference="protein motif:HMMSmart:IPR000005"
+ /inference="protein motif:ScanRegExp:IPR000005"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="protein motif:superfamily:IPR011051"
+ /inference="similar to AA sequence:REFSEQ:YP_215587.1"
+ /note="'KEGG: bur:Bcep18194_C7173 2.4e-06 two component
+ transcriptional regulator, AraC family;
+ COG: COG2207 AraC-type DNA-binding domain-containing
+ proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571381.1"
+ /db_xref="GI:161504269"
+ /db_xref="InterPro:IPR000005"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR011051"
+ /db_xref="InterPro:IPR012287"
+ /translation="MDALSRLLTLNDPQGSIDKNCPLGGDWQLPHAAGELSVIRWHTV
+ MQGEAQLEMPTGDAIMLTSGRVVFLPQNSAHRLRQSGKEPTHIMCGSLCLHTTSRYFL
+ TALPEVLCLAPPSHSPASIWLNAAILLLQQEAERHLPGADALCSQQCATLFTLAVRDW
+ LSQAGTAKSVLNLLLHPRLGRVILHMLEAPAHPWTVETLAQRVHMSRASFAQLFRDVS
+ DTTPLTVLTTLRLQIAAQTLSREALPVIVIAESVGYASESSFHKAFVREFGCTPGEYR
+ KRVNALGQ"
+ misc_feature 2302684..2303163
+ /locus_tag="SARI_02376"
+ /note="Cupin; Region: Cupin_6; pfam12852"
+ /db_xref="CDD:221809"
+ misc_feature 2303167..2303526
+ /locus_tag="SARI_02376"
+ /note="AraC-type DNA-binding domain-containing proteins
+ [Transcription]; Region: AraC; COG2207"
+ /db_xref="CDD:225117"
+ misc_feature 2303407..2303511
+ /locus_tag="SARI_02376"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ gene complement(2303582..2303785)
+ /locus_tag="SARI_02377"
+ CDS complement(2303582..2303785)
+ /locus_tag="SARI_02377"
+ /inference="similar to AA sequence:REFSEQ:ZP_00697607.1"
+ /note="'COG: COG3696 Putative silver efflux pump;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571382.1"
+ /db_xref="GI:161504270"
+ /translation="MKAGIALLAVVVISVLIGYWLHGKIRAKRRNPLNRFLIRLYHPL
+ LLKVLPWRERLEGGRYINMDIDR"
+ misc_feature complement(<2303630..>2303731)
+ /locus_tag="SARI_02377"
+ /note="heavy metal efflux pump, CzcA family; Region:
+ 2A0601; TIGR00914"
+ /db_xref="CDD:129992"
+ gene 2304313..2305242
+ /locus_tag="SARI_02378"
+ CDS 2304313..2305242
+ /locus_tag="SARI_02378"
+ /inference="similar to AA sequence:INSD:ABP39096.1"
+ /note="'COG: NOG25544 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571383.1"
+ /db_xref="GI:161504271"
+ /translation="MKAKLLVTSGTAACLGIIAALLPVCVHAAKVNATLSWVTGDYGT
+ PYDYSGPRLDMNLNPDGSNWYYDLGFRKQFHDSRQRYQRAEAMVGYRFRFDEGWIQPS
+ FRIREDLTTYDNGNRTTINFYTAHLTGQRLLSERFTFASSMILGIEREEVNTASNQSV
+ RRSDRLTWEIEPGVRFKSSANTMMTLNYFNAGKRSDKGDTWGLTDNSRNQQMRFYFNW
+ NTPIGLVLTPYVRYALNYGETSGWYESAAYSETKTKSKVNRLALQMAYPLSDSFRLQA
+ EYYIEDVKYKKGYTMGKENSSSKYMKVGVRATF"
+ gene 2305345..2307573
+ /locus_tag="SARI_02379"
+ CDS 2305345..2307573
+ /locus_tag="SARI_02379"
+ /inference="protein motif:HMMPfam:IPR005546"
+ /inference="protein motif:HMMTigr:IPR006315"
+ /inference="protein motif:ScanRegExp:IPR001589"
+ /inference="similar to AA sequence:INSD:ABG19353.1"
+ /note="'KEGG: rpa:RPA2162 4.7e-11 possible serine
+ protease/outer membrane autotransporter K01423;
+ COG: COG4625 Uncharacterized protein with a C-terminal OMP
+ (outer membrane protein) domain;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571384.1"
+ /db_xref="GI:161504272"
+ /db_xref="InterPro:IPR001589"
+ /db_xref="InterPro:IPR005546"
+ /db_xref="InterPro:IPR006315"
+ /translation="MSKKFRAKVLAVTISTILLSTAFNTAASACPPYIPAGSTCDAII
+ ASDGKAVTLASDLYVTEGNGLTYTGSTPFVAQYIRKNITVVGENAYAIYADGNTFFNN
+ NINLEKGINVISENGTAIKIDGSFKQPAVPNIGISIKDGSTVKGKENAIDFSEAKTAL
+ RIDVNGNVYGNIIGNGLEGNKVNFAYQSGAQQGLFDGYVISGVEKIENWGNLSIIAKD
+ KTIFWSGDFNNKKNAILNFKIGNSANLNTPLLLIEGKTVFNTGSKALFSYVGSNINDI
+ VNKDIILIQSNGGMSGTVEVGQGGVNAVSDLSPLLKQIDSWITTTDPVVNGGIQGNQL
+ VVRYGVNYEGGDNFVNIAKQGGISEQRLQAASYIVNYALSEYNKTQSVRSGELLALLT
+ SAGNSNTGDDGANSSVVDNGSNGIARLVEQLTPNAEGSEVRAALRVVDKMRDQANNRS
+ FYLRNQETATPWNFWAQTLYTHGRQGNEADIFGYQTNAYGINIGMDRRFRDEALFGVA
+ FGYQNSHININGYGNTKDVNSYEAMAYTGWFNDRYFINGNINMGYNKNSSTRNIGSLN
+ GYQGNTKAEADYNSLQMGYQASAGITFDLDIVKLQPRVEYNYQWFRVEDYAESGSPAS
+ LEVDRQSYSVKHLGAGFTAFNTYDLAFGKFTPSLSLMGYRDLNDSEVITETAGLVMDQ
+ GKGKGRFTITGDSIGNDIFEAALKSSLTLKNNIILDGNLNYYKRDGYNEGYIGLSVSK
+ YF"
+ misc_feature 2306716..2307534
+ /locus_tag="SARI_02379"
+ /note="Autotransporter beta-domain; Region:
+ Autotransporter; pfam03797"
+ /db_xref="CDD:217734"
+ gene 2307695..2310808
+ /locus_tag="SARI_02380"
+ CDS 2307695..2310808
+ /locus_tag="SARI_02380"
+ /inference="protein motif:Gene3D:IPR003159"
+ /inference="protein motif:Gene3D:IPR012329"
+ /inference="protein motif:HMMPfam:IPR003159"
+ /inference="protein motif:superfamily:IPR008929"
+ /inference="protein motif:superfamily:IPR008979"
+ /inference="protein motif:superfamily:IPR011013"
+ /inference="protein motif:superfamily:IPR011071"
+ /note="'KEGG: ypn:YPN_3027 0. chondroitin-sulfate-ABC
+ endolyase / chondroitin-sulfate-ABC exolyase
+ K08961:K08962;
+ COG: NOG36889 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571385.1"
+ /db_xref="GI:161504273"
+ /db_xref="InterPro:IPR003159"
+ /db_xref="InterPro:IPR008929"
+ /db_xref="InterPro:IPR008979"
+ /db_xref="InterPro:IPR011013"
+ /db_xref="InterPro:IPR011071"
+ /db_xref="InterPro:IPR012329"
+ /translation="MYTPFRFKLIALTVATLLGAAACTSHPSVNNAKSTNNEINKKML
+ MQATIIDFDGNNIPEFVSASKDSTLSLSPERYIMGNKSLKWDWQAGSSVTIHHPIKQV
+ PDSVASKIWGRKATQVLSFWIYNESPVDDYMIVDLGRGLGPAGSPDTGIKVKMNFSGW
+ RAIGVSLQNDLEGREIEGLGISENEAGESGARNTIASGAKSDMDDIRFKAPLKAPSGT
+ FYIDRIMLSIDDARYQWSDDQVKTRIQIPEIDFRLPKKLPPPTASELAATDSIRDALV
+ RIFIQVNTDENGLVIVDNYEKLRSDFAALRIKRNAEGKLSGRHIITDKQKVLYQPEFM
+ SAVDKQRFNDYVYLADYATLMFNISRTYQVSTAPAQRQELADMYILMTQHLLDQGFVD
+ GSALVTTHHWGYSSRWWYISALMMSDELEKHQLRQQVADALLWYSREFKANFDMQPGA
+ ESSDLDYFNTLSRQHLALLMLEPDPAKRIALLKRFGEYINVALSQIPPGSRDGLRPDG
+ TAWRHEGNYPGYSFPAFKNASQLVYMLQGTPFEVSKEGRAALKKAMVSAWIYSNPATS
+ LGLAGRHPFNSSSVKLFQDSFRWLALAGNPQTGDKVDKDLAAIYLQITRTPESESETL
+ FGQTIKPASLPQGNWTFNGGAFGIHRFSDKMVTLKAYNSNVWSSEIYYADNRYGRYQS
+ HGAVQVLPYGSQKEIGFTQDGWDWNRNPGTTTIHLPLAELDSPNPHTLMLRGDQPFSG
+ HSSLAGKYGMFAFKFDAPSMPKFDSSFTARKTALETENRLVLLGSNISNSTTKYPTET
+ TLFQHGITDKAHALWVNGERITAFPYQRTLGEGDWLIDGHGTGYLLTAGAKGEVRRQH
+ QVSANNKTRKPTEADISVAWLSHGKKPQDAEYEYLMVLEATPGSMQQLANDYRAGKKP
+ YEVLRKDNVAHIVRDNVTQTIGYTAFSAVTPADGVVKSIPQPAIIMTQSRGDKELIVS
+ GVTPDLNMTRTTAATPVPISVTLNGQWQTSVPNPQVSVRTSGGTTELTFSSYFGIPQE
+ ITLKQQL"
+ misc_feature 2307824..2308423
+ /locus_tag="SARI_02380"
+ /note="Lyase, N terminal; Region: Lyase_N; pfam09092"
+ /db_xref="CDD:204131"
+ misc_feature 2308574..2310622
+ /locus_tag="SARI_02380"
+ /note="Glycosaminoglycan (GAG) polysaccharide lyase
+ family. This family consists of a group of secreted
+ bacterial lyase enzymes capable of acting on
+ glycosaminoglycans, such as hyaluronan and chondroitin, in
+ the extracellular matrix of host tissues; Region:
+ GAG_Lyase; cd01083"
+ /db_xref="CDD:238517"
+ misc_feature order(2308751..2308753,2308760..2308762,2308772..2308774,
+ 2308883..2308885,2308889..2308894,2308904..2308906,
+ 2308913..2308915,2308925..2308927,2309063..2309065,
+ 2309081..2309083,2309231..2309233,2309252..2309254,
+ 2309261..2309263,2309270..2309272,2309282..2309284,
+ 2309408..2309413,2309705..2309710)
+ /locus_tag="SARI_02380"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:238517"
+ misc_feature order(2309063..2309065,2309231..2309233,2309252..2309254)
+ /locus_tag="SARI_02380"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:238517"
+ gene complement(2310928..2311278)
+ /locus_tag="SARI_02381"
+ CDS complement(2310928..2311278)
+ /locus_tag="SARI_02381"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:INSD:AAA27173.1"
+ /note="'COG: COG3335 Transposase and inactivated
+ derivatives;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571386.1"
+ /db_xref="GI:161504274"
+ /db_xref="InterPro:IPR009057"
+ /translation="MHQGMTVTDVSRLLCAARSSVGRWINWFTLYGVDGLKSLRPGRA
+ PRWPVTDILHILPLLVQSFPQYFGWLRSRWSADLLSRIFERLDKARLKDTAFVNLVTV
+ AQRSVVKHQKWREY"
+ misc_feature complement(2311024..2311278)
+ /locus_tag="SARI_02381"
+ /note="Winged helix-turn helix; Region: HTH_29; pfam13551"
+ /db_xref="CDD:222216"
+ misc_feature complement(2311168..>2311272)
+ /locus_tag="SARI_02381"
+ /note="Homeodomain-like domain; Region: HTH_23; cl17451"
+ /db_xref="CDD:248005"
+ gene 2311284..2311505
+ /locus_tag="SARI_02382"
+ CDS 2311284..2311505
+ /locus_tag="SARI_02382"
+ /inference="similar to AA sequence:INSD:AAZ89714.1"
+ /note="'COG: NOG09015 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571387.1"
+ /db_xref="GI:161504275"
+ /translation="MVFIMGLLDFFTHQSSFFIRDKCYDRHNSVRLVIGFDLAINQIA
+ QLGLSSFPVFYYLERLFSKRILVKVKDGK"
+ gene complement(2311735..2311914)
+ /locus_tag="SARI_02383"
+ CDS complement(2311735..2311914)
+ /locus_tag="SARI_02383"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571388.1"
+ /db_xref="GI:161504276"
+ /translation="MLSENLLNEKIISIDIFIFQVFNLCWSKHAPMVNKLTGRINQPV
+ IMSYFGNLVLYNQSL"
+ gene complement(2311925..2312239)
+ /locus_tag="SARI_02384"
+ CDS complement(2311925..2312239)
+ /locus_tag="SARI_02384"
+ /note="'Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571389.1"
+ /db_xref="GI:161504277"
+ /translation="MKNQTGVNKICHPEIIFSILTATNLTLIQSFQDIWQPATGGIFC
+ IIWWWWESLVVITDAEKAVADSTKSNGKNIRFFIISPVNTQIILAIYILHKHCSHFIF
+ MQ"
+ gene 2313736..2313969
+ /locus_tag="SARI_02385"
+ CDS 2313736..2313969
+ /locus_tag="SARI_02385"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571390.1"
+ /db_xref="GI:161504278"
+ /translation="MILANTNETVKNYKFFIIQFKQTTIIQRLNKRIDYEKELFSPSD
+ NDYLHLYFFCLREYQRLQSYDLESSGIFSIYRK"
+ gene 2313839..2314648
+ /locus_tag="SARI_02386"
+ CDS 2313839..2314648
+ /locus_tag="SARI_02386"
+ /inference="protein motif:FPrintScan:IPR003539"
+ /inference="protein motif:HMMPfam:IPR005135"
+ /inference="protein motif:HMMPIR:IPR003539"
+ /inference="similar to AA sequence:REFSEQ:NP_456275.1"
+ /note="'COG: NOG09971 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571391.1"
+ /db_xref="GI:161504279"
+ /db_xref="InterPro:IPR003539"
+ /db_xref="InterPro:IPR005135"
+ /translation="MKKNFFHLLIMIICTYISFACANISDYRVMTWNLQGSSASTESK
+ WNVNVRQLLSGTSGVDILMVQEAGTIPTSAVPTGRHIQPFGVGIPIDEYTWNLGTTRR
+ QDIRYIYYSRIDVGARRVNLAIVSRQRADNVYVLRPTTVASRPVIGIGLGNDVFLTAH
+ ALASGGPDAAAIVRVTTNFFRQPQMRHLSWFLAGDFNRAPDRLESDLMTEHLERFVTV
+ LAPTEPTQIGGGILDYGVIVDRALYSQRVEASRNPQLASDHYPVAFLARRC"
+ misc_feature 2313923..2314633
+ /locus_tag="SARI_02386"
+ /note="CdtB, the catalytic DNase I-like subunit of
+ cytolethal distending toxin (CDT) protein; Region: CdtB;
+ cd09081"
+ /db_xref="CDD:197315"
+ misc_feature order(2313935..2313937,2314034..2314036,2314316..2314318,
+ 2314421..2314423,2314427..2314429,2314535..2314537,
+ 2314610..2314615)
+ /locus_tag="SARI_02386"
+ /note="putative catalytic site [active]"
+ /db_xref="CDD:197315"
+ misc_feature order(2313941..2313943,2313947..2313949,2313974..2313979,
+ 2313986..2313991,2314034..2314036,2314175..2314180,
+ 2314193..2314198,2314262..2314264,2314268..2314270,
+ 2314316..2314318,2314322..2314327,2314508..2314510,
+ 2314514..2314519,2314523..2314525,2314616..2314618)
+ /locus_tag="SARI_02386"
+ /note="CdtC interface [polypeptide binding]; other site"
+ /db_xref="CDD:197315"
+ misc_feature order(2313941..2313943,2313947..2313949,2313974..2313979,
+ 2313986..2313991,2314001..2314003,2314034..2314036,
+ 2314127..2314132,2314175..2314180,2314193..2314198,
+ 2314262..2314264,2314268..2314270,2314316..2314318,
+ 2314322..2314327,2314505..2314510,2314514..2314519,
+ 2314523..2314525,2314562..2314573,2314577..2314579,
+ 2314616..2314618)
+ /locus_tag="SARI_02386"
+ /note="heterotrimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:197315"
+ misc_feature order(2313986..2313988,2314001..2314003,2314127..2314132,
+ 2314505..2314507,2314517..2314519,2314562..2314573,
+ 2314577..2314579,2314616..2314618)
+ /locus_tag="SARI_02386"
+ /note="CdtA interface [polypeptide binding]; other site"
+ /db_xref="CDD:197315"
+ misc_feature order(2314034..2314036,2314610..2314612)
+ /locus_tag="SARI_02386"
+ /note="putative metal binding site [ion binding]; other
+ site"
+ /db_xref="CDD:197315"
+ misc_feature order(2314316..2314318,2314427..2314429,2314613..2314615)
+ /locus_tag="SARI_02386"
+ /note="putative phosphate binding site [ion binding];
+ other site"
+ /db_xref="CDD:197315"
+ gene 2314762..2315187
+ /locus_tag="SARI_02387"
+ CDS 2314762..2315187
+ /locus_tag="SARI_02387"
+ /inference="protein motif:HMMPfam:IPR010767"
+ /inference="similar to AA sequence:INSD:AAV77534.1"
+ /note="'COG: NOG18514 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571392.1"
+ /db_xref="GI:161504280"
+ /db_xref="InterPro:IPR010767"
+ /translation="MYSLVVQHMGLITGKIMSCFTTPAIMEMLGHYRWRVYEPFRFYL
+ SKDKNDVIEVPVGFITDLATVPRIFWSLLPPDGEYAKAAIIHDYLYHYSLRNRKESDL
+ IFLDAMKVLGVPKQKRILMYLAVRMFGWKYYNSHISQCD"
+ misc_feature 2314858..2315136
+ /locus_tag="SARI_02387"
+ /note="Protein of unknown function (DUF1353); Region:
+ DUF1353; pfam07087"
+ /db_xref="CDD:148601"
+ gene complement(2315379..2315849)
+ /locus_tag="SARI_02388"
+ CDS complement(2315379..2315849)
+ /locus_tag="SARI_02388"
+ /inference="protein motif:HMMPfam:IPR008565"
+ /inference="similar to AA sequence:INSD:CAD02122.1"
+ /note="'COG: COG3926 Putative secretion activating
+ protein;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571393.1"
+ /db_xref="GI:161504281"
+ /db_xref="InterPro:IPR008565"
+ /translation="MKYLRLSSIERAVTLITLTTARANGYMGDMRNLTRAQALKILEA
+ DYWYGPRFDQVAIISHSVAAEHCDTGVNMGPFIPIEWFQRWLNVFNDQQRFYPDLIVD
+ GQIGPRNLSALKIFLSSQKSEGEMILIRALNCSQRQRYLELAEQRQANELFTYG"
+ misc_feature complement(2315628..>2315804)
+ /locus_tag="SARI_02388"
+ /note="Glycosyl hydrolase 108; Region: Glyco_hydro_108;
+ pfam05838"
+ /db_xref="CDD:203334"
+ misc_feature complement(2315382..2315621)
+ /locus_tag="SARI_02388"
+ /note="Predicted Peptidoglycan domain; Region:
+ PG_binding_3; pfam09374"
+ /db_xref="CDD:220210"
+ gene complement(2316060..2316791)
+ /locus_tag="SARI_02389"
+ CDS complement(2316060..2316791)
+ /locus_tag="SARI_02389"
+ /inference="protein motif:HMMPfam:IPR003898"
+ /inference="similar to AA sequence:REFSEQ:YP_150848.1"
+ /note="'KEGG: sty:STY1890 3.0e-100 putative pertussis-like
+ toxin subunit;
+ COG: NOG18513 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571394.1"
+ /db_xref="GI:161504282"
+ /db_xref="InterPro:IPR003898"
+ /translation="MKKLILLTFIIASFDIYAIDFVYRVDPNPPDVIFRDGFSLLGYN
+ RDLQQWISGRSCAGGSSDSRYIATTSDINKTYAIARAYYFHSKFKGNLYRYKIRADNN
+ FYSLTPSVDYLESQGGHFNAYEKSMIRLQSEYVSTLSILPENIQKAVPLVYDSATGQI
+ KDGTSTINDDYLSISSMSNPGVIPFLPDPQTNTQQRIDAFGSLISSCFSIYSVCQTHR
+ GQKTEVYKMPFYDARPVIQFITSGK"
+ misc_feature complement(2316066..2316791)
+ /locus_tag="SARI_02389"
+ /note="pertussis toxin-like subunit ArtA; Provisional;
+ Region: PRK15272"
+ /db_xref="CDD:185175"
+ gene complement(2316788..2317243)
+ /locus_tag="SARI_02390"
+ CDS complement(2316788..2317243)
+ /locus_tag="SARI_02390"
+ /inference="protein motif:superfamily:IPR008992"
+ /inference="similar to AA sequence:INSD:AAO68770.1"
+ /note="'COG: NOG27732 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571395.1"
+ /db_xref="GI:161504283"
+ /db_xref="InterPro:IPR008992"
+ /translation="MKKITSVCALLSLISSFNASAEWTGDYENISYFSHEVISEFHVG
+ QIDGGAYFCIKAVKADGSSSTPLIACSVSNKSVWAPSFKVLLEQARYFYVTEQSVRIY
+ YDHNVWTNQPFVNTFSTNALVGLSSCSSAATDCFGPGKPKSESKRDVEQ"
+ misc_feature complement(2316827..2317243)
+ /locus_tag="SARI_02390"
+ /note="subtilase cytotoxin subunit B; Provisional; Region:
+ PRK15266"
+ /db_xref="CDD:185173"
+ gene 2318785..2318931
+ /locus_tag="SARI_02391"
+ CDS 2318785..2318931
+ /locus_tag="SARI_02391"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571396.1"
+ /db_xref="GI:161504284"
+ /translation="MVMTPANQKPGSFLVGHGNGEDLQVERVQKVLEEKRAIEIGFNG
+ RCTR"
+ gene complement(2319228..2319512)
+ /locus_tag="SARI_02392"
+ CDS complement(2319228..2319512)
+ /locus_tag="SARI_02392"
+ /inference="similar to AA sequence:REFSEQ:YP_215992.1"
+ /note="'COG: COG3436 Transposase and inactivated
+ derivatives;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571397.1"
+ /db_xref="GI:161504285"
+ /translation="MEIDNNICENALRCVALGRRNYLFFGSDRGGEAAAIIYSLLGMC
+ KLNGVEVRGMVTRRAVENQRLAIEPGARTAALEPRNRKIILTLRPTRDAY"
+ misc_feature complement(2319414..>2319512)
+ /locus_tag="SARI_02392"
+ /note="Transposase IS66 family; Region: DDE_Tnp_IS66;
+ pfam03050"
+ /db_xref="CDD:217337"
+ gene complement(2319780..2320859)
+ /locus_tag="SARI_02393"
+ CDS complement(2319780..2320859)
+ /locus_tag="SARI_02393"
+ /inference="similar to AA sequence:REFSEQ:NP_460026.1"
+ /note="'COG: COG4886 Leucine-rich repeat (LRR) protein;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571398.1"
+ /db_xref="GI:161504286"
+ /translation="MSSWEKCKEFFCSTHQTEALECIRKICHPPAGTTREDVVSRFGQ
+ LRTLAYAGWEENIHSGQHGENYFCILDEDSQEILSVTLDNAGNYTVNCQGYSETHHLT
+ MATEPGVVRTEHAEGASGTSCLPATTASQTAVEYDAIWSEWESAAPARESRARVAAVH
+ RESSKLCCVPNSSAPTSQIDITYNLTSDIDAAAYLEELKRNPMINNKIMNPAGQCESL
+ MTPVSNFMNEKGFDNIRYRGIFIWDKPTEEIPTNHFAVVGNKEGKDYVFDVTAHQFEN
+ RGMSNLNGPLILSADEWACKYRMATRRKLIYYTDFSNSRIAAYAYDALPRELESESMA
+ GKVFVTSPRWFNTFKKQKYSLIGKR"
+ misc_feature complement(<2320521..2320859)
+ /locus_tag="SARI_02393"
+ /note="pathogenicity island 2 effector protein SseI;
+ Provisional; Region: PRK15372"
+ /db_xref="CDD:185270"
+ misc_feature complement(<2320443..2320517)
+ /locus_tag="SARI_02393"
+ /note="Type III secretion system leucine rich repeat
+ protein; Region: TTSSLRR; pfam12468"
+ /db_xref="CDD:204932"
+ misc_feature complement(2319786..>2320328)
+ /locus_tag="SARI_02393"
+ /note="pathogenicity island 2 effector protein SseI;
+ Provisional; Region: PRK15372"
+ /db_xref="CDD:185270"
+ gene complement(2321135..2321676)
+ /locus_tag="SARI_02394"
+ /pseudogene="unknown"
+ gene 2321863..2322444
+ /locus_tag="SARI_02395"
+ CDS 2321863..2322444
+ /locus_tag="SARI_02395"
+ /inference="protein motif:HMMPfam:IPR007539"
+ /inference="similar to AA sequence:REFSEQ:YP_215313.1"
+ /note="'COG: NOG13881 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571400.1"
+ /db_xref="GI:161504288"
+ /db_xref="InterPro:IPR007539"
+ /translation="MWITCIWHISVYLKRPYTDESNKGQNDVMPVYAAPPAPVTPETL
+ PCSVKLKPSLIIGKGCKTETLLTALKRRADYYAELEAMTPEQRAEHDAGIAEFKAMLE
+ GNNSAAMQLFGNSEQLNSPVTPDGWISCSERMPDNDESKPIAIFTGNCLGQGMFVATY
+ DDDGFFDFWEGMEIIGVTHWIPLPEPPQEVNHG"
+ misc_feature 2322238..2322426
+ /locus_tag="SARI_02395"
+ /note="Protein of unknown function (DUF551); Region:
+ DUF551; pfam04448"
+ /db_xref="CDD:203017"
+ gene 2322818..2323159
+ /locus_tag="SARI_02396"
+ CDS 2322818..2323159
+ /locus_tag="SARI_02396"
+ /inference="protein motif:Gene3D:IPR008957"
+ /inference="protein motif:superfamily:IPR008957"
+ /inference="similar to AA sequence:INSD:AAL21484.1"
+ /note="'COG: COG4733 Phage-related protein, tail
+ component;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571401.1"
+ /db_xref="GI:161504289"
+ /db_xref="InterPro:IPR008957"
+ /translation="MAAEDDSDRLVSSAETPDTQYRFRGLTPGRYTLSVRAVNSQGQQ
+ GDPASTQFSIAAPAAPSFIELTPGYFQITATPRQAVYDPTVQYEFWFSDTQIADIRKV
+ EPPYWRRGEQT"
+ misc_feature <2322848..2322967
+ /locus_tag="SARI_02396"
+ /note="Fibronectin type 3 domain; One of three types of
+ internal repeats found in the plasma protein fibronectin.
+ Its tenth fibronectin type III repeat contains an RGD cell
+ recognition sequence in a flexible loop between 2 strands.
+ Approximately 2% of all...; Region: FN3; cl00065"
+ /db_xref="CDD:241584"
+ misc_feature order(2322899..2322901,2322941..2322943)
+ /locus_tag="SARI_02396"
+ /note="Interdomain contacts; other site"
+ /db_xref="CDD:238020"
+ misc_feature order(2322947..2322952,2322956..2322961)
+ /locus_tag="SARI_02396"
+ /note="Cytokine receptor motif; other site"
+ /db_xref="CDD:238020"
+ gene complement(2323249..2323740)
+ /locus_tag="SARI_02397"
+ CDS complement(2323249..2323740)
+ /locus_tag="SARI_02397"
+ /inference="protein motif:HMMPfam:IPR009901"
+ /inference="similar to AA sequence:INSD:AAL19845.1"
+ /note="'COG: NOG34132 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571402.1"
+ /db_xref="GI:161504290"
+ /db_xref="InterPro:IPR009901"
+ /translation="MDGELKNLKCNIIQLAAITGLHRQTVVSRLSGVPLAPGSNEKNK
+ LYLLTDVIRVLMEAPVSQAAEHQDPNKMTPKERKDWFDSEKGRLWLEKEMKQVVPLTE
+ VHQQMAAIVKAITQVLEVWPDKLERDKGWSAEQLNEAQDVVDEVRILLVKAMQETADD
+ DGE"
+ misc_feature complement(2323261..2323716)
+ /locus_tag="SARI_02397"
+ /note="Protein of unknown function (DUF1441); Region:
+ DUF1441; pfam07278"
+ /db_xref="CDD:148721"
+ gene 2324093..2324284
+ /locus_tag="SARI_02398"
+ CDS 2324093..2324284
+ /locus_tag="SARI_02398"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571403.1"
+ /db_xref="GI:161504291"
+ /translation="MKKQNIIPYMEKIMHERGKIAFQPSWFPKDDDQEETFDSLCDLY
+ AEGKITMKGGYYFDLIFIL"
+ gene complement(2324339..2324842)
+ /locus_tag="SARI_02399"
+ CDS complement(2324339..2324842)
+ /locus_tag="SARI_02399"
+ /inference="similar to AA sequence:REFSEQ:YP_216200.1"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571404.1"
+ /db_xref="GI:161504292"
+ /translation="MRRILATTAAICLGGCITVYGPVKTGGQQQQDSQSVQQPGMSEQ
+ ISTSFIGNRKPDELLNAVELYFREKAITASVNDQATGIIAGTGDDPELSSLYLDCSLL
+ PQTQNIQEHYRIVAQVWSAGEGSNVSVMVTGTAGLDTADGNDKVKPVECKSTGIFEKD
+ LLERLRK"
+ gene complement(2325194..2325439)
+ /locus_tag="SARI_02400"
+ CDS complement(2325194..2325439)
+ /locus_tag="SARI_02400"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571405.1"
+ /db_xref="GI:161504293"
+ /translation="MNKMTENFMITASDANARRRGEKHLIGYGKCDEDFKRLVHSATH
+ HTLFYPDVIEVYDVNFIKRLKLYECDSDGALQEIKFE"
+ gene complement(2325532..2326428)
+ /locus_tag="SARI_02401"
+ CDS complement(2325532..2326428)
+ /locus_tag="SARI_02401"
+ /inference="protein motif:HMMPfam:IPR004929"
+ /inference="similar to AA sequence:REFSEQ:NP_461547.2"
+ /note="'KEGG: sec:SC2613 2.1e-42 enpP; hypothetical
+ protein K01423;
+ COG: NOG10270 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571406.1"
+ /db_xref="GI:161504294"
+ /db_xref="InterPro:IPR004929"
+ /translation="MKLKRPLIVAFLLPLLWGFPAKKEMSRLVLALSMRSFQCHNEHQ
+ KPAVFEVAAIPPLISQAIANNTKAKAGSRTGSPNAHSGHRLPALSVLSVAIVRQQTMR
+ HANRITAKAPKKALIWCHCDMAMASPSDRCPHCGRFMYVGAEMNRISTGVIDSLLIVV
+ AALAWAIDHYHSNAVRFRQQRDTATHNLKLANETISDMQTRQRDVAALDAKYTKELAD
+ AQTRNTDLQRRLAAGGRMRVEGRCSVPTQTETASTSRVGNAATVELSPGAGQNVLNIR
+ AGIISDQEKLKYLQGYIRTQCY"
+ misc_feature complement(2325538..2325912)
+ /locus_tag="SARI_02401"
+ /note="Bacteriophage lysis protein; Region: Phage_lysis;
+ pfam03245"
+ /db_xref="CDD:190576"
+ gene complement(2326436..2328850)
+ /locus_tag="SARI_02402"
+ CDS complement(2326436..2328850)
+ /locus_tag="SARI_02402"
+ /inference="protein motif:HMMPfam:IPR005546"
+ /inference="protein motif:HMMTigr:IPR006315"
+ /inference="protein motif:superfamily:IPR011050"
+ /inference="similar to AA sequence:REFSEQ:ZP_00825979.1"
+ /note="'KEGG: eci:UTI89_C2514 5.6e-54 yfaL; hypothetical
+ protein YfaL precursor K07279;
+ COG: COG3468 Type V secretory pathway, adhesin AidA;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571407.1"
+ /db_xref="GI:161504295"
+ /db_xref="InterPro:IPR005546"
+ /db_xref="InterPro:IPR006315"
+ /db_xref="InterPro:IPR011050"
+ /translation="MKKLLALLVLSAPQANAVTYIDTLGNEYNSDKNLFGWLYVGQDS
+ PYGTPKPSSLNITNGATVSVNRDPADSSYLTGTGSVSIESSNLTVEGNGSALNVEDIL
+ YVRNSQLKIDNKAILTAGFQVVSQLDNSHIIVSGNSKLNTGTLVLNANTNSTMLISGG
+ SEVIANTFFMSSADDYKSSYIKIDGADSRLNVSDAYLGYIGNASLVVSNGGEVNVRNE
+ IELAERAGQNATITIGGLDESAPEAPGYVNASEIVFKSGVGEIRFNHTSDNYDFSTPI
+ SGTGDLTFINGTTNLTGDNKSMSGNVNVGGGSILNVLNDNALGDSSVTIASSGQLALL
+ TANDFKFNNDLVNNGTITLSDQNTYGKLVTVSGNYSSNNGALVFNGALADDNTVIDKL
+ LIKGNYDGTTNVAVNNIGGIGAETLNGIDIISINGNVNGTFKQAGRIVAGAYDYSLVR
+ GEGANENHWYLTSQKQPIPGPDPVPTPKPSLNILRPEAGSYVANNYFSNTMFLNDFQD
+ RSGEVKYFDPISGTYKFSSLWMRQEGGHNRFNDSTGQLKTQSNRYVLQLGGDLFKWAG
+ SDDESIRIGIMGGYGNNHSRTHSSITDYSSKASVNGYSAGLYATWIKGYDDKSWSYVD
+ VWGQYSWFDNSVKGEQISEESYSSKGFTGSIEGGYAYKVGESGRTSYWLQPVAQLALM
+ DVRTKNLNEKNGTNVSFNGSGNIMSRLGVRAYANGHNKIDDNSGRTFEPYVEVNYIHN
+ TKDFSVKMNNETVSQSGARDAFEAKMGVNGQLSENTNVWVNVSQLVGSNSFSDTQATL
+ GIKYAF"
+ misc_feature complement(2327450..2327905)
+ /locus_tag="SARI_02402"
+ /note="Pertactin-like passenger domains (virulence
+ factors), C-terminal, subgroup 2, of autotransporter
+ proteins of the type V secretion system of Gram-negative
+ bacteria. This subgroup includes the passenger domains of
+ the nonprotease autotransporters, Ag43; Region:
+ PL2_Passenger_AT; cd01344"
+ /db_xref="CDD:238654"
+ misc_feature complement(2326439..2327773)
+ /locus_tag="SARI_02402"
+ /note="outer membrane autotransporter barrel domain;
+ Region: autotrans_barl; TIGR01414"
+ /db_xref="CDD:233402"
+ misc_feature complement(2326481..2327275)
+ /locus_tag="SARI_02402"
+ /note="Autotransporter beta-domain; Region:
+ Autotransporter; pfam03797"
+ /db_xref="CDD:217734"
+ gene complement(2329242..2329643)
+ /locus_tag="SARI_02403"
+ CDS complement(2329242..2329643)
+ /locus_tag="SARI_02403"
+ /inference="similar to AA sequence:REFSEQ:ZP_00729206.1"
+ /note="'Psort location: extracellular, including cell
+ wall, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571408.1"
+ /db_xref="GI:161504296"
+ /translation="MRAIITALQLMKAHWWWWLTICALVIFSWLWSENTRINASMNTL
+ LAENSSNRAVIDNVLKTVAITNIIPGTNQYAKNQIALDSQRAKADFKVAVANDDCATR
+ PVPAAAADRLRKYADSLRDNPGSATTSKFDR"
+ gene complement(2329640..2329939)
+ /locus_tag="SARI_02404"
+ CDS complement(2329640..2329939)
+ /locus_tag="SARI_02404"
+ /inference="protein motif:BlastProDom:IPR000726"
+ /inference="similar to AA sequence:REFSEQ:NP_700425.1"
+ /note="'KEGG: cvi:CV0024 5.4e-06 probable
+ hydroxyethylTHIazole kinase K00878;
+ COG: COG3179 Predicted chitinase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571409.1"
+ /db_xref="GI:161504297"
+ /db_xref="InterPro:IPR000726"
+ /translation="MGNNSPGDGWKYRGRGLLQITGRENYTKCGTALKLDLVSTPGLL
+ TQELHAARSAAWYYTLRGCLLYSGDVIRVTQIINGGQNGLADRQRRYTLALATLV"
+ misc_feature complement(2329643..>2329939)
+ /locus_tag="SARI_02404"
+ /note="lysozyme_like domain. This contains several
+ members including Soluble Lytic Transglycosylases (SLT),
+ Goose Egg-White Lysozymes (GEWL), Hen Egg-White Lysozymes
+ (HEWL), chitinases, bacteriophage lambda lysozymes,
+ endolysins, autolysins, and chitosanases; Region:
+ lysozyme_like; cl00222"
+ /db_xref="CDD:241700"
+ unsure 2329960..2330336
+ /note="Sequence derived from one plasmid subclone"
+ gene 2330064..2330255
+ /locus_tag="SARI_02405"
+ CDS 2330064..2330255
+ /locus_tag="SARI_02405"
+ /inference="similar to AA sequence:REFSEQ:NP_992239.1"
+ /note="'COG: COG3311 Predicted transcriptional regulator;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571410.1"
+ /db_xref="GI:161504298"
+ /translation="MATRYIGMKEMCTLTGKSKPTLWRMYAKRKEFPKPEKTPSGIFL
+ GWTESVYEEWVNKEKTADI"
+ misc_feature 2330064..2330246
+ /locus_tag="SARI_02405"
+ /note="Prophage CP4-57 regulatory protein (AlpA); Region:
+ Phage_AlpA; cl17523"
+ /db_xref="CDD:248077"
+ gene complement(2330332..2330405)
+ /locus_tag="SARI_02406"
+ tRNA complement(2330332..2330405)
+ /locus_tag="SARI_02406"
+ /product="tRNA-Arg"
+ gene complement(2330616..2331302)
+ /locus_tag="SARI_02407"
+ CDS complement(2330616..2331302)
+ /locus_tag="SARI_02407"
+ /inference="similar to AA sequence:SwissProt:P37925"
+ /note="'COG: COG3539 P pilus assembly protein, pilin FimA;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571411.1"
+ /db_xref="GI:161504299"
+ /translation="MKIYSALLLAGTALFFTHPALATVCRNSNGTPTDIFYDLSDVFT
+ SGNNRPGQVVTLPEKSGWVGVNATCPAGTTVNYTYRSYVSEVPVQSTEGNFKYLKLND
+ YLLGAMSITDSYSGVFYPPRNYIRMGVDYNVSQQRPFGVQDSKLVFKLKVIRPFINMV
+ TIPRQTMFTVYVTTSTGDALSTPVYTISYSGKVEVPQNCEVNAGQVVEFDFGDIGASL
+ FSQAGAIVKY"
+ misc_feature complement(<2330631..2331302)
+ /locus_tag="SARI_02407"
+ /note="Fimbrial protein; Region: Fimbrial; cl01416"
+ /db_xref="CDD:242492"
+ gene complement(2331316..2333928)
+ /locus_tag="SARI_02408"
+ CDS complement(2331316..2333928)
+ /locus_tag="SARI_02408"
+ /inference="protein motif:HMMPfam:IPR000015"
+ /inference="protein motif:ScanRegExp:IPR000015"
+ /inference="protein motif:ScanRegExp:IPR001862"
+ /inference="protein motif:superfamily:IPR008985"
+ /note="'COG: COG3188 P pilus assembly protein, porin PapC;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571412.1"
+ /db_xref="GI:161504300"
+ /db_xref="InterPro:IPR000015"
+ /db_xref="InterPro:IPR001862"
+ /db_xref="InterPro:IPR008985"
+ /translation="MKKTTWFAGRFPGYVSPLSGVALLVLAALYPLTSRGESYFNPAF
+ LSADTASVADLSRFEKGNHQPPGIYRVDIWRNDEFVATQDIRFEAGTVGTGDKSGGLM
+ PCFTPEWMKRLGVNTAAFPVSDKGVDSTCIHLPEKIPGAEVAFDFASMRLNISLPQAS
+ MLNSARGYIPPEEWDEGIPAALINYSFTGSRGTDSDSYFLSLLSGLNYGPWRLRNNGA
+ WNYSKGDGYHSQRWNNIGTWVQRAIIPLKSELVMGDSNTGNDVFDSVGFRGARLYSSD
+ NMYPDSLQGYAPTVRGIARTAAKLTIRQNGYVIYQSYVSPGAFAITDLNPTSSSGDLE
+ VTVDEKDGSQQRYTVPYSTVPLLQREGRVKYDLVAGDLRSGNSQQSSPFFFQGTVIAG
+ LPAGITAYGGTQLADRYRAVVVGAGRNLGDWGAVSIDVTHARSQLADDSTYQGQSLRF
+ LYAKSLNNYGTHFQLLGYRYSTRGFYTLDDVAYRSMEGYDYEYDSDGRRHNVLVAQSY
+ HNLRYSKKDRFQVNISQNLGDYGSLYLSGSQQNYWNMSDTNTWYQLGYASGWQGISYS
+ LSWSWNESVGISGTDRILAFNMSVPFSVLTGRRYARDNILDRTYATFNANRNRDGDNS
+ WQTGVGGTLLEGRNLSYSVTQGRSSTNGYSGRASANWQAKYGTLGVGYNYDRDQHDYN
+ WQLSGGVVGHADGITFSQPLGDTNVLIKAPGAKGVRIENQTGVKTDWRGYAVMPYATV
+ YRYNRVALDTNTMDNHTDVENNVSSVVPTQGALVRAAFDTRIGVRAIITVRLDERPLP
+ FGAIVRETASGVTSMVGDDGQIYLSGLPLKGELLIQWGEGKNARCLAPYALAEDSLKQ
+ AITIASATCIRPSS"
+ misc_feature complement(2331319..2333826)
+ /locus_tag="SARI_02408"
+ /note="outer membrane usher protein FimD; Provisional;
+ Region: PRK15198"
+ /db_xref="CDD:185120"
+ misc_feature complement(2333359..2333814)
+ /locus_tag="SARI_02408"
+ /note="PapC N-terminal domain; Region: PapC_N; pfam13954"
+ /db_xref="CDD:222472"
+ misc_feature complement(2331595..2333334)
+ /locus_tag="SARI_02408"
+ /note="Type VII secretion system (T7SS), usher protein;
+ Region: Usher; pfam00577"
+ /db_xref="CDD:216001"
+ misc_feature complement(2331370..2331567)
+ /locus_tag="SARI_02408"
+ /note="PapC C-terminal domain; Region: PapC_C; pfam13953"
+ /db_xref="CDD:222471"
+ gene complement(2333959..2334672)
+ /locus_tag="SARI_02409"
+ CDS complement(2333959..2334672)
+ /locus_tag="SARI_02409"
+ /inference="protein motif:BlastProDom:IPR001829"
+ /inference="protein motif:FPrintScan:IPR001829"
+ /inference="protein motif:Gene3D:IPR001829"
+ /inference="protein motif:HMMPfam:IPR001829"
+ /inference="protein motif:ScanRegExp:IPR001829"
+ /inference="protein motif:superfamily:IPR008962"
+ /inference="similar to AA sequence:INSD:CAA52682.1"
+ /note="'COG: COG3121 P pilus assembly protein, chaperone
+ PapD;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571413.1"
+ /db_xref="GI:161504301"
+ /db_xref="InterPro:IPR001829"
+ /db_xref="InterPro:IPR008962"
+ /translation="MQKVFFTMLNSIKLGFIVLLTLFTSLNVQAAGGIALGATRVIYP
+ SAAKQTSLAISNSDTKERYLVNSWIENSAGQKEKTFIVTPPLFVSEPKSENTLRIIYA
+ GQPLPVDRESLFWMNVKAIPSVDKSHIEGKNVLQLAILSRIKLFVRPANLPQTPEEAP
+ ALLNFSHVGNYLKVTNPSAYYLTLVNISVGAKKIGNVMIAPKSDVQILLPAGTQGNVT
+ FQTVNDYGALTTATTASLG"
+ misc_feature complement(2333995..2334651)
+ /locus_tag="SARI_02409"
+ /note="fimbrial chaperone protein FimC; Provisional;
+ Region: PRK15195"
+ /db_xref="CDD:185117"
+ misc_feature complement(2334214..2334576)
+ /locus_tag="SARI_02409"
+ /note="Gram-negative pili assembly chaperone, N-terminal
+ domain; Region: Pili_assembly_N; pfam00345"
+ /db_xref="CDD:215870"
+ misc_feature complement(2333995..2334159)
+ /locus_tag="SARI_02409"
+ /note="Gram-negative pili assembly chaperone, C-terminal
+ domain; Region: Pili_assembly_C; pfam02753"
+ /db_xref="CDD:217216"
+ gene complement(2334695..2335228)
+ /locus_tag="SARI_02410"
+ CDS complement(2334695..2335228)
+ /locus_tag="SARI_02410"
+ /inference="protein motif:Gene3D:IPR000259"
+ /inference="protein motif:HMMPfam:IPR000259"
+ /inference="protein motif:superfamily:IPR008966"
+ /inference="similar to AA sequence:REFSEQ:NP_806053.1"
+ /note="'COG: COG3539 P pilus assembly protein, pilin FimA;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571414.1"
+ /db_xref="GI:161504302"
+ /db_xref="InterPro:IPR000259"
+ /db_xref="InterPro:IPR008966"
+ /translation="MIRKGAALVGLLWLSPVIAQPVMVESGRIHLRGQLVNGGCVVAT
+ ESQDLRVLMGQYRTNAFAGPGSFAPVSVPFSLRLISCSAEVWRHVGIAFAGVTPAEDP
+ HVFLASGEGIGNAGIGLALFDDQQRQIIPNSLPLHYAPILTQEMTFHFTARYRAISEN
+ MTPGRIHSEVWFTLVYP"
+ misc_feature complement(2334698..2335228)
+ /locus_tag="SARI_02410"
+ /note="fimbrial protein FimI; Provisional; Region:
+ PRK15200"
+ /db_xref="CDD:185122"
+ gene complement(2335303..2335890)
+ /locus_tag="SARI_02411"
+ CDS complement(2335303..2335890)
+ /locus_tag="SARI_02411"
+ /inference="protein motif:Gene3D:IPR000259"
+ /inference="protein motif:HMMPfam:IPR000259"
+ /inference="protein motif:superfamily:IPR008966"
+ /inference="similar to AA sequence:INSD:ABL63535.1"
+ /note="'COG: COG3539 P pilus assembly protein, pilin FimA;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571415.1"
+ /db_xref="GI:161504303"
+ /db_xref="InterPro:IPR000259"
+ /db_xref="InterPro:IPR008966"
+ /translation="MCVIQGKSMKHKLMTSTIASLIFVAGAAVAADPTPTPVSVSGGT
+ IHFEGKLVNAACAVSTKSADQTVTLGQYRTASFTTVGDTTALVPFTIVLNDCDPKVAA
+ TAAVAFSGQADKTNNNLLAVSSADNSTTATGVGIEILDNTSSPLKPDGATFSAKQALI
+ EGTNTLRFTARYKATVADTTAGQANADATFIMKYE"
+ misc_feature complement(2335306..2335866)
+ /locus_tag="SARI_02411"
+ /note="type-1 fimbrial protein subunit A; Provisional;
+ Region: PRK15194"
+ /db_xref="CDD:237920"
+ gene 2336411..2337277
+ /locus_tag="SARI_02412"
+ CDS 2336411..2337277
+ /locus_tag="SARI_02412"
+ /inference="protein motif:BlastProDom:IPR000672"
+ /inference="protein motif:HMMPfam:IPR000672"
+ /inference="protein motif:ScanRegExp:IPR000672"
+ /inference="similar to AA sequence:INSD:AAL19496.1"
+ /note="'catalyzes the formation of
+ 5,10-methenyltetrahydrofolate from
+ 5,10-methylenetetrahydrofolate and subsequent formation of
+ 10-formyltetrahydrofolate from
+ 5,10-methenyltetrahydrofolate'"
+ /codon_start=1
+ /transl_table=11
+ /product="bifunctional 5,10-methylene-tetrahydrofolate
+ dehydrogenase/ 5,10-methylene-tetrahydrofolate
+ cyclohydrolase"
+ /protein_id="YP_001571416.1"
+ /db_xref="GI:161504304"
+ /db_xref="InterPro:IPR000672"
+ /translation="MAAKIIDGKTIAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSN
+ PASQIYVASKRKACDEVGFVSRSYDLPETTSEAELLELIDTLNADSTIDGILVQLPLP
+ AGIDNVKVLERIAPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTYGL
+ NAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKDLRHHVEHADLLIVAVGKPGFIPG
+ EWIKEGAIVIDVGINRLENGKVVGDVVFEEAAARASYITPVPGGVGPMTVATLIENTL
+ QACTEYHDPQGK"
+ misc_feature 2336411..2337265
+ /locus_tag="SARI_02412"
+ /note="bifunctional 5,10-methylene-tetrahydrofolate
+ dehydrogenase/ 5,10-methylene-tetrahydrofolate
+ cyclohydrolase; Provisional; Region: PRK10792"
+ /db_xref="CDD:236760"
+ misc_feature 2336420..2336773
+ /locus_tag="SARI_02412"
+ /note="Tetrahydrofolate dehydrogenase/cyclohydrolase,
+ catalytic domain; Region: THF_DHG_CYH; pfam00763"
+ /db_xref="CDD:201431"
+ misc_feature 2336756..2337244
+ /locus_tag="SARI_02412"
+ /note="NADP binding domain of methylene-tetrahydrofolate
+ dehydrogenase/cyclohydrolase; Region:
+ NAD_bind_m-THF_DH_Cyclohyd; cd01080"
+ /db_xref="CDD:133448"
+ misc_feature order(2336783..2336788,2336795..2336797,2336885..2336887,
+ 2336891..2336893,2336909..2336911,2336936..2336941,
+ 2336948..2336950,2336957..2336974,2336978..2336980,
+ 2336984..2336989,2337014..2337016)
+ /locus_tag="SARI_02412"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:133448"
+ misc_feature order(2336834..2336836,2336909..2336914,2336978..2336983,
+ 2337038..2337040,2337044..2337046,2337053..2337055,
+ 2337098..2337100,2337104..2337106,2337200..2337202,
+ 2337209..2337211)
+ /locus_tag="SARI_02412"
+ /note="NADP binding site [chemical binding]; other site"
+ /db_xref="CDD:133448"
+ misc_feature order(2337188..2337193,2337212..2337214)
+ /locus_tag="SARI_02412"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:133448"
+ gene 2337279..2337491
+ /locus_tag="SARI_02413"
+ CDS 2337279..2337491
+ /locus_tag="SARI_02413"
+ /inference="similar to AA sequence:REFSEQ:NP_455131.1"
+ /note="'COG: COG2501 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571417.1"
+ /db_xref="GI:161504305"
+ /translation="MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIADGLVKVDGA
+ VETRKRCKIVAGQTVSFEGQSVKVTA"
+ misc_feature 2337279..2337488
+ /locus_tag="SARI_02413"
+ /note="ribosome-associated protein; Provisional; Region:
+ PRK11507"
+ /db_xref="CDD:183166"
+ gene complement(2337318..2337593)
+ /locus_tag="SARI_02414"
+ CDS complement(2337318..2337593)
+ /locus_tag="SARI_02414"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571418.1"
+ /db_xref="GI:161504306"
+ /translation="MPDGDASHLIPAYRASYSRPDKALAAIRRIHRRNSGGDFHALAF
+ KADGLPGDNFAAFTSFNRAIDLDQPVGNSDFRLSAAFAPAFQLEQIA"
+ gene complement(2337602..2338987)
+ /gene="cysS"
+ /locus_tag="SARI_02415"
+ CDS complement(2337602..2338987)
+ /gene="cysS"
+ /locus_tag="SARI_02415"
+ /inference="protein motif:HMMPanther:IPR002308"
+ /inference="protein motif:HMMPfam:IPR002308"
+ /inference="protein motif:HMMTigr:IPR002308"
+ /inference="protein motif:superfamily:IPR009080"
+ /inference="similar to AA sequence:SwissProt:Q8Z8P6"
+ /note="catalyzes a two-step reaction; charges a cysteine
+ by linking its carboxyl group to the alpha-phosphate of
+ ATP then transfers the aminoacyl-adenylate to its tRNA"
+ /codon_start=1
+ /transl_table=11
+ /product="cysteinyl-tRNA synthetase"
+ /protein_id="YP_001571419.1"
+ /db_xref="GI:161504307"
+ /db_xref="InterPro:IPR002308"
+ /db_xref="InterPro:IPR009080"
+ /translation="MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTF
+ VAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDA
+ LNILRPDSEPRATHHIQEIIEITRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDL
+ EQLQAGARVDVVDVKRNPMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLG
+ NHFDIHGGGSDLMFPHHENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFT
+ VRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDKSAAPAG
+ GEAFEARFVEAMNDDFNTPEAYSVLFDMAREVNRLKSEDMTAANAMASHLRKISGVLG
+ LLEQEPDAFLQSGAQADDGEVAEIEALIQQRLDARKAKDWAAADAARDRLTEMGIILE
+ DGPQGTTWRRK"
+ misc_feature complement(2337605..2338987)
+ /gene="cysS"
+ /locus_tag="SARI_02415"
+ /note="cysteinyl-tRNA synthetase; Validated; Region: cysS;
+ PRK00260"
+ /db_xref="CDD:234705"
+ misc_feature complement(<2338640..2338981)
+ /gene="cysS"
+ /locus_tag="SARI_02415"
+ /note="catalytic core domain of cysteinyl tRNA synthetase;
+ Region: CysRS_core; cd00672"
+ /db_xref="CDD:173899"
+ misc_feature complement(order(2338643..2338645,2338784..2338786,
+ 2338790..2338792,2338856..2338861,2338868..2338873,
+ 2338877..2338879,2338895..2338906))
+ /gene="cysS"
+ /locus_tag="SARI_02415"
+ /note="active site"
+ /db_xref="CDD:173899"
+ misc_feature complement(2338868..2338879)
+ /gene="cysS"
+ /locus_tag="SARI_02415"
+ /note="HIGH motif; other site"
+ /db_xref="CDD:173899"
+ misc_feature complement(2338073..>2338375)
+ /gene="cysS"
+ /locus_tag="SARI_02415"
+ /note="catalytic core domain of cysteinyl tRNA synthetase;
+ Region: CysRS_core; cd00672"
+ /db_xref="CDD:173899"
+ misc_feature complement(2338178..2338192)
+ /gene="cysS"
+ /locus_tag="SARI_02415"
+ /note="KMSKS motif; other site"
+ /db_xref="CDD:173899"
+ misc_feature complement(2337608..2338072)
+ /gene="cysS"
+ /locus_tag="SARI_02415"
+ /note="Anticodon-binding domain of cysteinyl tRNA
+ synthetases; Region: Anticodon_Ia_Cys; cd07963"
+ /db_xref="CDD:153417"
+ misc_feature complement(order(2337611..2337613,2337635..2337646,
+ 2337671..2337673,2337680..2337682,2337692..2337694,
+ 2337707..2337709,2337719..2337721,2337887..2337889,
+ 2337896..2337898,2337905..2337910,2337917..2337919,
+ 2337926..2337931,2337935..2337937,2338016..2338018,
+ 2338025..2338027,2338034..2338036,2338043..2338045,
+ 2338055..2338057,2338064..2338066))
+ /gene="cysS"
+ /locus_tag="SARI_02415"
+ /note="tRNA binding surface [nucleotide binding]; other
+ site"
+ /db_xref="CDD:153417"
+ misc_feature complement(order(2337635..2337643,2337671..2337673,
+ 2337680..2337682,2337692..2337694,2337707..2337709,
+ 2337719..2337721))
+ /gene="cysS"
+ /locus_tag="SARI_02415"
+ /note="anticodon binding site; other site"
+ /db_xref="CDD:153417"
+ gene complement(2339139..2339666)
+ /locus_tag="SARI_02418"
+ CDS complement(2339139..2339666)
+ /locus_tag="SARI_02418"
+ /inference="similar to AA sequence:INSD:AAN79117.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571420.1"
+ /db_xref="GI:161504310"
+ /translation="MSPRLLADGHVFNDDVFFWYVLVHTATASGDAFDFIYHVHTFYD
+ FRKDAVAPALQTFAGEVQEVVVCHVDEELRGSRVWCLSTRHRQRTTGIFQTIVGFVFD
+ RLFGGFLFHARLKAAALNHKTVNHTVENGVVIKTFTAVVQEVFNCFRRFIVKGFDYDI
+ AVISVESNHFCILFQ"
+ gene 2339160..2339654
+ /locus_tag="SARI_02416"
+ CDS 2339160..2339654
+ /locus_tag="SARI_02416"
+ /inference="protein motif:Gene3D:IPR002130"
+ /inference="protein motif:HMMPfam:IPR002130"
+ /inference="protein motif:ScanRegExp:IPR002130"
+ /inference="protein motif:superfamily:IPR002130"
+ /inference="similar to AA sequence:REFSEQ:YP_215562.1"
+ /note="'KEGG: sty:STY0584 8.5e-87 ppiB; peptidyl-prolyl
+ cis-trans isomerase B K03768;
+ COG: COG0652 Peptidyl-prolyl cis-trans isomerase
+ (rotamase) - cyclophilin family;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="peptidyl-prolyl cis-trans isomerase B (rotamase
+ B)"
+ /protein_id="YP_001571421.1"
+ /db_xref="GI:161504308"
+ /db_xref="InterPro:IPR002130"
+ /translation="MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRV
+ INGFMIQGGGFEPGMKQKATKEAIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINV
+ ADNDFLNFSGESLQGWGYCVFAEVVEGMDVVDKIKGVATGRSGMHQDVPKEDVIIENV
+ TVSE"
+ misc_feature 2339166..2339639
+ /locus_tag="SARI_02416"
+ /note="cyclophilin_EcCYP_like: cyclophilin-type A-like
+ peptidylprolyl cis- trans isomerase (PPIase) domain
+ similar to the cytosolic E. coli cyclophilin A and
+ Streptomyces antibioticus SanCyp18. Compared to the
+ archetypal cyclophilin Human cyclophilin A, these...;
+ Region: cyclophilin_EcCYP_like; cd01920"
+ /db_xref="CDD:238901"
+ misc_feature order(2339286..2339288,2339292..2339294,2339301..2339306,
+ 2339310..2339312,2339415..2339432,2339454..2339456,
+ 2339478..2339483,2339517..2339519)
+ /locus_tag="SARI_02416"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:238901"
+ gene 2339657..2340379
+ /locus_tag="SARI_02417"
+ CDS 2339657..2340379
+ /locus_tag="SARI_02417"
+ /inference="protein motif:HMMPfam:IPR004843"
+ /inference="protein motif:HMMTigr:IPR010138"
+ /inference="similar to AA sequence:REFSEQ:NP_455127.1"
+ /note="'catalyzes the formation of 2,3=diacylglucosamine
+ 1-phosphate from UDP-2,3=diacylglucosamine'"
+ /codon_start=1
+ /transl_table=11
+ /product="UDP-2,3-diacylglucosamine hydrolase"
+ /protein_id="YP_001571422.1"
+ /db_xref="GI:161504309"
+ /db_xref="InterPro:IPR004843"
+ /db_xref="InterPro:IPR010138"
+ /translation="MATLFIADLHLQTEEPAIVAGFLRFLAVEARQADALYILGDLFE
+ AWIGDDDPNPLHREMAVAIKSLVDSGVPCFFIHGNRDFLIGKRFARESGMTLLPQEKV
+ LDLYGRNVLIMHGDTLCTDDAGYQAFRAKVHNPWVQRLFLTLPLFIRRRIAARLRAGS
+ KAANSSKSLDIMDVNAQTVVAEMEKHRVQWLIHGHTHRPAVHELSANGQPAFRVVLGA
+ WHHEGSMVKVTPDNVELIAFPL"
+ misc_feature 2339666..2340313
+ /locus_tag="SARI_02417"
+ /note="Escherichia coli YbbF/LpxH and related proteins,
+ metallophosphatase domain; Region: MPP_YbbF-LpxH; cd07398"
+ /db_xref="CDD:163641"
+ misc_feature 2339666..2340253
+ /locus_tag="SARI_02417"
+ /note="Calcineurin-like phosphoesterase; Region:
+ Metallophos; pfam00149"
+ /db_xref="CDD:215750"
+ misc_feature order(2339678..2339680,2339684..2339686,2339777..2339779,
+ 2339891..2339896,2339996..2339998,2340239..2340241,
+ 2340245..2340247)
+ /locus_tag="SARI_02417"
+ /note="putative active site [active]"
+ /db_xref="CDD:163641"
+ misc_feature order(2339678..2339680,2339684..2339686,2339777..2339779,
+ 2339891..2339893,2339996..2339998,2340239..2340241,
+ 2340245..2340247)
+ /locus_tag="SARI_02417"
+ /note="putative metal binding site [ion binding]; other
+ site"
+ /db_xref="CDD:163641"
+ gene 2340497..2341006
+ /locus_tag="SARI_02419"
+ CDS 2340497..2341006
+ /locus_tag="SARI_02419"
+ /inference="protein motif:BlastProDom:IPR000031"
+ /inference="protein motif:Gene3D:IPR000031"
+ /inference="protein motif:HMMPfam:IPR000031"
+ /inference="protein motif:HMMTigr:IPR000031"
+ /inference="protein motif:superfamily:IPR000031"
+ /inference="similar to AA sequence:REFSEQ:NP_459529.1"
+ /note="'KEGG: stm:STM0534 4.2e-85 purE;
+ phosphoribosylaminoimidazole carboxylase = AIR
+ carboxylase, catalytic subunit K01588;
+ COG: COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR)
+ mutase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphoribosylaminoimidazole carboxylase
+ catalytic subunit"
+ /protein_id="YP_001571423.1"
+ /db_xref="GI:161504311"
+ /db_xref="InterPro:IPR000031"
+ /translation="MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILDVPHHVEVVSA
+ HRTPDKLFSFAETAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVD
+ SLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILAQHDAELHQRIADWRKAQTDEVL
+ ENPDPRGTL"
+ misc_feature 2340512..2341003
+ /locus_tag="SARI_02419"
+ /note="Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
+ [Nucleotide transport and metabolism]; Region: PurE;
+ COG0041"
+ /db_xref="CDD:223119"
+ gene 2341003..2342070
+ /locus_tag="SARI_02420"
+ CDS 2341003..2342070
+ /locus_tag="SARI_02420"
+ /inference="protein motif:Gene3D:IPR013816"
+ /inference="protein motif:Gene3D:IPR013817"
+ /inference="protein motif:HMMPfam:IPR003135"
+ /inference="protein motif:HMMTigr:IPR005875"
+ /inference="protein motif:superfamily:IPR011054"
+ /inference="similar to AA sequence:INSD:AAO69922.1"
+ /note="With PurE catalyzes the conversion of
+ aminoimidazole ribonucleotide to carboxyaminoimidazole
+ ribonucleotide in the de novo purine nucleotide
+ biosynthetic pathway"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphoribosylaminoimidazole carboxylase ATPase
+ subunit"
+ /protein_id="YP_001571424.1"
+ /db_xref="GI:161504312"
+ /db_xref="InterPro:IPR003135"
+ /db_xref="InterPro:IPR005875"
+ /db_xref="InterPro:IPR011054"
+ /db_xref="InterPro:IPR013816"
+ /db_xref="InterPro:IPR013817"
+ /translation="MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPTAVPVQQS
+ VITAEIERWPETALTRELARHPAFVNRDVFPIIADRLTQKQLFDKLGLATAPWELLSD
+ KGQWSGLFDKLGELAIVKRRVGGYDGRGQWRLRADETGELPDDCYGECIVERGIHFSG
+ EVSLVGARARDGSTVFYPLTHNLHQDGILRTSVAFPQADAGQQVQAESMLSAIMQALN
+ YVGVMAMECFITPEGLLINELAPRVHNSGHWTQNGASISQFELHLRAITGLPLPAPVV
+ NAPSVMVNLIGSTLNYDWLKLPLVHLHWYDKTVHPGRKVGHLNLTDNDTSRLSATLEA
+ LSPLLPPEYASSIIWAQSKLK"
+ misc_feature 2341003..2342013
+ /locus_tag="SARI_02420"
+ /note="phosphoribosylaminoimidazole carboxylase ATPase
+ subunit; Reviewed; Region: PRK06019"
+ /db_xref="CDD:235674"
+ misc_feature 2341261..2341764
+ /locus_tag="SARI_02420"
+ /note="ATP-grasp domain; Region: ATP-grasp; pfam02222"
+ /db_xref="CDD:216935"
+ gene 2342166..2343251
+ /locus_tag="SARI_02421"
+ CDS 2342166..2343251
+ /locus_tag="SARI_02421"
+ /inference="protein motif:HMMSmart:IPR001763"
+ /inference="similar to AA sequence:INSD:AAL19467.1"
+ /note="catalyzes the selenophosphate-dependent transfer of
+ selenium from selenophosphate for conversion of
+ 2-thiouridine to 2-selenouridine at the wobble position in
+ tRNA"
+ /codon_start=1
+ /transl_table=11
+ /product="tRNA 2-selenouridine synthase"
+ /protein_id="YP_001571425.1"
+ /db_xref="GI:161504313"
+ /db_xref="InterPro:IPR001763"
+ /translation="MNHETNYHALLIADTPLIDVRAPIEFQQGAMPGAINLPLMMDDE
+ RAAVGTCYKRQGADAALSLGHRLVCGDIRQQRLEAWKAAYQRFPNGYLCCARGGQRSH
+ IVQRWLQETGIDCPLIEGGYKALRQTAIQATWQLVQKPILLIGGCTGSGKTQLVRQQP
+ NGVDLEGLARHRGSSFGRTLKPQLSQASFENKLAVELLKINARQTLKRWVLEDEGRTI
+ GANHLPECLRERMAQAPITVVEDPFALRLERLREEYFIRMHHDFIHAYGDEGGWQAYS
+ EYLHHGLFAIRRRLGLQRFAELTNTLDMALADQLSNGSTDGHMAWLVPLLNEYYDPMY
+ RYQLEKKAANIVFRGTWQEVANWLKAQ"
+ misc_feature 2342166..2343248
+ /locus_tag="SARI_02421"
+ /note="tRNA 2-selenouridine synthase; Provisional; Region:
+ PRK11784"
+ /db_xref="CDD:236982"
+ misc_feature 2342178..2342552
+ /locus_tag="SARI_02421"
+ /note="Member of the Rhodanese Homology Domain
+ superfamily. This CD includes several putative ATP /GTP
+ binding proteins including E. coli YbbB; Region:
+ RHOD_YbbB; cd01520"
+ /db_xref="CDD:238778"
+ misc_feature 2342445..2342447
+ /locus_tag="SARI_02421"
+ /note="active site residue [active]"
+ /db_xref="CDD:238778"
+ gene complement(2343290..2343949)
+ /locus_tag="SARI_02422"
+ CDS complement(2343290..2343949)
+ /locus_tag="SARI_02422"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="similar to AA sequence:INSD:CAD04997.1"
+ /note="'KEGG: baa:BA_0884 2.9e-47
+ binding-protein-dependent transport systems inner membrane
+ component K00294;
+ COG: COG2011 ABC-type metal ion transport system, permease
+ component;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571426.1"
+ /db_xref="GI:161504314"
+ /db_xref="InterPro:IPR000515"
+ /translation="MDDLLPDLTLAFNETFQMLSISTVLAILGGLPLGFLIFVTDRHL
+ FWQNRFIYLVASVLVNIIRSVPFVILLVLLLPLTQLLLGNTIGPIAASVPLSVAAIAF
+ YARLVDSALREVDKGVIEAALAFGASPIRIICTVLLPEASAGLLRGLTITLVSLIGYS
+ AMAGIVGGGGVGDLAIRYGYYRYETEVMVVTVVALIVLVQVVQMLGDWLAKRADKRDR
+ H"
+ misc_feature complement(<2343461..2343808)
+ /locus_tag="SARI_02422"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(2343467..2343478,2343497..2343499,
+ 2343506..2343511,2343551..2343553,2343602..2343604,
+ 2343611..2343616,2343626..2343628,2343632..2343637,
+ 2343644..2343646,2343650..2343652,2343725..2343727,
+ 2343731..2343736,2343743..2343772,2343776..2343787))
+ /locus_tag="SARI_02422"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(2343461..2343478,2343725..2343769))
+ /locus_tag="SARI_02422"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature complement(order(2343530..2343532,2343542..2343547,
+ 2343563..2343601))
+ /locus_tag="SARI_02422"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene complement(2343942..2344958)
+ /locus_tag="SARI_02423"
+ CDS complement(2343942..2344958)
+ /locus_tag="SARI_02423"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:INSD:AAV78098.1"
+ /note="'KEGG: rru:Rru_A0788 5.9e-79 ABC transporter
+ component K06020;
+ COG: COG1135 ABC-type metal ion transport system, ATPase
+ component;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571427.1"
+ /db_xref="GI:161504315"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MIEIEKVCVDFTAGRGTPTRAVDNVSLHIAAGEIFGIVGTSGAG
+ KSTLLRTLNALTRPSQGRVNVNGVEISALDGKALRQARQRIGMIFQHFNLMHTRTVAQ
+ NVAFSLKAAGCERSKIAPRVAEILTLVGLADKANRFPVQLSGGQKQRVGIARAIANHP
+ DVLLCDEPTSALDLETAATILALLRQINVQLGITIVLITHEMNVIKSICDRVAVMSGG
+ KVVESGEVFDVFAHPQHAFTQQLVSHTLNLTLPERLREHLPGQLLKILFIGDSAEQPV
+ LSEVAIQFGVAVNILHGKIEYIGERALGILMVQLTAPHNPTAVAAAVEHIRQRTAQVE
+ VIRG"
+ misc_feature complement(2343945..2344958)
+ /locus_tag="SARI_02423"
+ /note="ABC-type metal ion transport system, ATPase
+ component [Inorganic ion transport and metabolism];
+ Region: AbcC; COG1135"
+ /db_xref="CDD:224058"
+ misc_feature complement(2344257..2344958)
+ /locus_tag="SARI_02423"
+ /note="ATP-binding cassette domain of methionine
+ transporter; Region: ABC_MetN_methionine_transporter;
+ cd03258"
+ /db_xref="CDD:213225"
+ misc_feature complement(2344821..2344844)
+ /locus_tag="SARI_02423"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213225"
+ misc_feature complement(order(2344359..2344361,2344458..2344463,
+ 2344689..2344691,2344818..2344826,2344830..2344835))
+ /locus_tag="SARI_02423"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213225"
+ misc_feature complement(2344689..2344700)
+ /locus_tag="SARI_02423"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213225"
+ misc_feature complement(2344506..2344535)
+ /locus_tag="SARI_02423"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213225"
+ misc_feature complement(2344458..2344475)
+ /locus_tag="SARI_02423"
+ /note="Walker B; other site"
+ /db_xref="CDD:213225"
+ misc_feature complement(2344440..2344451)
+ /locus_tag="SARI_02423"
+ /note="D-loop; other site"
+ /db_xref="CDD:213225"
+ misc_feature complement(2344353..2344373)
+ /locus_tag="SARI_02423"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213225"
+ misc_feature complement(2343951..2344181)
+ /locus_tag="SARI_02423"
+ /note="NIL domain; Region: NIL; pfam09383"
+ /db_xref="CDD:204224"
+ gene complement(2344995..2345825)
+ /locus_tag="SARI_02424"
+ CDS complement(2344995..2345825)
+ /locus_tag="SARI_02424"
+ /inference="protein motif:HMMPfam:IPR004872"
+ /inference="similar to AA sequence:INSD:AAV78099.1"
+ /note="'COG: COG1464 ABC-type metal ion transport system,
+ periplasmic component/surface antigen;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571428.1"
+ /db_xref="GI:161504316"
+ /db_xref="InterPro:IPR004872"
+ /translation="MGLGQSLRIAAGTLLLACGLQFAHADGSPQTIVFGVAPGPYGDM
+ VKQAIAPTLKEKGYKIVVREFSDYVQPNMALSNGSIDANLFQHTLYFDKFTADKGLKL
+ SKLIVVPTAGMGFYSRKIKNLDELKKGDIITLSNDPTNLARGLRFLQSLGLITIKDNI
+ DPTKASERDIASNPKGLVFKPLEAAQLPRTLDGVTGALVNGNFAVAAGLDLSGAIKQE
+ HLDENLKNIIAVRSEDADKPFAKDIVEAVKSPAYRAVIDDPKNIYSAFQKPEWMTATP
+ "
+ misc_feature complement(2345013..2345825)
+ /locus_tag="SARI_02424"
+ /note="ABC-type metal ion transport system, periplasmic
+ component/surface antigen [Inorganic ion transport and
+ metabolism]; Region: NlpA; COG1464"
+ /db_xref="CDD:224381"
+ misc_feature complement(2345013..2345732)
+ /locus_tag="SARI_02424"
+ /note="NLPA lipoprotein; Region: Lipoprotein_9; pfam03180"
+ /db_xref="CDD:146017"
+ gene complement(2346354..2348768)
+ /locus_tag="SARI_02425"
+ CDS complement(2346354..2348768)
+ /locus_tag="SARI_02425"
+ /inference="protein motif:HMMPfam:IPR003838"
+ /note="'COG: COG3127 Predicted ABC-type transport system
+ involved in lysophospholipase L1 biosynthesis, permease
+ component;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571429.1"
+ /db_xref="GI:161504317"
+ /db_xref="InterPro:IPR003838"
+ /translation="MIARWFWREWRSPSLIIVWLALSLAVACVLALGSISDRMEKGLS
+ QQSREFMAGDRTLQSSREAPKAWIEEARKRGLKVGEQLTFATMTFAGDTPQLASVKAV
+ DGVYPMYGELQTRPAGVKPQPGNVLLAPRLMALLNLKTGDTIDVGDATLRIAGEVVQE
+ PDSGFNPFQMAPRLMMNMADVAKTGAIQPGSRVMWRYKFGGTPQQLAGYENWLLPQLK
+ PEHRWYGLDQDDGALGKSLERSQQFLLLSALLTLLLAVAAVAVAMSHYCRSRYDLVAI
+ LKTLGAGRAQLRQLIIGQWLMVLGLSAVTGGAIGLLFEKVLLALLKPVLPADLPSASL
+ WPWLWALGAMTVISLLVGLRPYRLLLATQPLRVLRRDVVARVWPLKMYLPVACAVVVA
+ LLAGLMGGSMLLWSVLAGAVVLALLCGLVGWMLLNVLRGMTLTSLPLRLAVSRLLRQP
+ WSTLSQLSAFSLSFMLLALLLVLRGDLLERWQQQLPPESPNYFLINIASGQVAPLKAF
+ LAEHQVIPQTFYPIVRARLTKINGSPTEGRQDESLNRELNLTWLDTRPDHNPLVAGHW
+ PPKPGEVSMEEGLAKRLNVRLGDSVTFMGDTQAFSAKVTSLRQVDWESLRPNFFFIFP
+ SGALDGQPQSWLTSFRWENGNGMLTQLNREFPTVSLLDIGAILKQVGQVLEQVSRALE
+ VMVVLVTLCGMLLLLAQVQVGMRQRHQELVVWRTLGAGKKLLRTTLWCEFAMLGLVSG
+ LVAAIGAETALAVLQINVFDFPWEPDWRLWVALPFCGALLLSVCGGWLGVRLLKGKAL
+ FRQFSG"
+ misc_feature complement(2346363..2348768)
+ /locus_tag="SARI_02425"
+ /note="Predicted ABC-type transport system involved in
+ lysophospholipase L1 biosynthesis, permease component
+ [Secondary metabolites biosynthesis, transport, and
+ catabolism]; Region: COG3127"
+ /db_xref="CDD:225669"
+ misc_feature complement(2347725..2347967)
+ /locus_tag="SARI_02425"
+ /note="FtsX-like permease family; Region: FtsX; pfam02687"
+ /db_xref="CDD:217187"
+ misc_feature complement(2346387..2346671)
+ /locus_tag="SARI_02425"
+ /note="FtsX-like permease family; Region: FtsX; pfam02687"
+ /db_xref="CDD:217187"
+ gene complement(2348765..2349451)
+ /locus_tag="SARI_02426"
+ CDS complement(2348765..2349451)
+ /locus_tag="SARI_02426"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:INSD:AAX64454.1"
+ /note="'KEGG: pen:PSEEN1885 1.6e-60 ABC transporter,
+ ATP-binding protein;
+ COG: COG4181 Predicted ABC-type transport system involved
+ in lysophospholipase L1 biosynthesis, ATPase component;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative ABC transporter ATP-binding protein
+ YbbA"
+ /protein_id="YP_001571430.1"
+ /db_xref="GI:161504318"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MPAENSVEVHRLRKSVGQGEHELSILTGVELVVKRGETIALIGE
+ SGSGKSTLLAILAGLDDGSSGEVSLVGKPLHQMDEEARAQLRAQHVGFVFQSFMLIPT
+ LNALENVELPALLRGENNAQSKAGAKALLEQLGLGKRRDHLPAQLSGGEQQRVALARA
+ FNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLALAARCDRRLR
+ LVNGKLQEEA"
+ misc_feature complement(2348768..2349451)
+ /locus_tag="SARI_02426"
+ /note="putative ABC transporter ATP-binding protein YbbA;
+ Provisional; Region: PRK10584"
+ /db_xref="CDD:182569"
+ misc_feature complement(2348780..2349433)
+ /locus_tag="SARI_02426"
+ /note="ATP-binding cassette domain of the transporters
+ involved in export of lipoprotein and macrolide, and cell
+ division protein; Region: ABC_MJ0796_LolCDE_FtsE; cd03255"
+ /db_xref="CDD:213222"
+ misc_feature complement(2349302..2349325)
+ /locus_tag="SARI_02426"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213222"
+ misc_feature complement(order(2348837..2348839,2348936..2348941,
+ 2349167..2349169,2349299..2349307,2349311..2349316))
+ /locus_tag="SARI_02426"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213222"
+ misc_feature complement(2349167..2349178)
+ /locus_tag="SARI_02426"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213222"
+ misc_feature complement(2348984..2349013)
+ /locus_tag="SARI_02426"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213222"
+ misc_feature complement(2348936..2348953)
+ /locus_tag="SARI_02426"
+ /note="Walker B; other site"
+ /db_xref="CDD:213222"
+ misc_feature complement(2348918..2348929)
+ /locus_tag="SARI_02426"
+ /note="D-loop; other site"
+ /db_xref="CDD:213222"
+ misc_feature complement(2348831..2348851)
+ /locus_tag="SARI_02426"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213222"
+ gene 2349452..2350036
+ /locus_tag="SARI_02427"
+ CDS 2349452..2350036
+ /locus_tag="SARI_02427"
+ /inference="protein motif:Gene3D:IPR013831"
+ /inference="protein motif:HMMPfam:IPR001087"
+ /inference="protein motif:ScanRegExp:IPR008265"
+ /inference="protein motif:superfamily:IPR013830"
+ /inference="similar to AA sequence:REFSEQ:NP_459501.1"
+ /note="'KEGG: spt:SPA2216 2.5e-96 tesA; acyl-coA
+ THIoesterase I K01076;
+ COG: COG2755 Lysophospholipase L1 and related esterases;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="multifunctional acyl-CoA thioesterase I and
+ protease I and lysophospholipase L1"
+ /protein_id="YP_001571431.1"
+ /db_xref="GI:161504319"
+ /db_xref="InterPro:IPR001087"
+ /db_xref="InterPro:IPR008265"
+ /db_xref="InterPro:IPR013830"
+ /db_xref="InterPro:IPR013831"
+ /translation="MPFLFLFLLTFRVAAADTLLVLGDSLSAGYRMAANAAWPSLLND
+ KWQNQTPVVNASISGDTSLQGLTRLPALLQQHQPRWVLVELGGNDGLRGFAPAQTEQT
+ LRKIIQAVKAANAQPLLMQIHLPANYGRRYNESFSAIYPKLAKEFDIPLLPFFMEEVY
+ LKPQWMQDDGIHPNRDAQPFIADWMAKQLTPFLS"
+ misc_feature 2349500..2350021
+ /locus_tag="SARI_02427"
+ /note="Lysophospholipase L1-like subgroup of
+ SGNH-hydrolases. The best characterized member in this
+ family is TesA, an E. coli periplasmic protein with
+ thioesterase, esterase, arylesterase, protease and
+ lysophospholipase activity; Region:
+ Lysophospholipase_L1_like; cd01822"
+ /db_xref="CDD:238860"
+ misc_feature order(2349524..2349526,2349626..2349628,2349713..2349715,
+ 2349956..2349958,2349965..2349967)
+ /locus_tag="SARI_02427"
+ /note="active site"
+ /db_xref="CDD:238860"
+ misc_feature order(2349524..2349526,2349956..2349958,2349965..2349967)
+ /locus_tag="SARI_02427"
+ /note="catalytic triad [active]"
+ /db_xref="CDD:238860"
+ misc_feature order(2349524..2349526,2349626..2349628,2349713..2349715)
+ /locus_tag="SARI_02427"
+ /note="oxyanion hole [active]"
+ /db_xref="CDD:238860"
+ misc_feature 2349719..2349736
+ /locus_tag="SARI_02427"
+ /note="switch loop; other site"
+ /db_xref="CDD:238860"
+ gene 2350191..2350961
+ /locus_tag="SARI_02428"
+ CDS 2350191..2350961
+ /locus_tag="SARI_02428"
+ /inference="protein motif:HMMPanther:IPR002347"
+ /inference="protein motif:HMMPfam:IPR002198"
+ /inference="protein motif:ScanRegExp:IPR002198"
+ /inference="similar to AA sequence:INSD:AAL19459.1"
+ /note="'KEGG: sty:STY0551 3.4e-131 ybbO; hypothetical
+ oxidoreductase;
+ COG: COG1028 Dehydrogenases with different specificities
+ (related to short-chain alcohol dehydrogenases);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="short chain dehydrogenase"
+ /protein_id="YP_001571432.1"
+ /db_xref="GI:161504320"
+ /db_xref="InterPro:IPR002198"
+ /db_xref="InterPro:IPR002347"
+ /translation="MQKSVLITGCSSGIGLDSALELKRQGFQILAGCRKPDDVARMNS
+ MGFTGVLIDLDSPKSVDRAADDVIALTDNRLYGIFNNAGYGVYGPLSTISREQMEQQF
+ SSNFFGAHQLTMRLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDAL
+ RMELRHTGVKVSLIEPGPIRTRFTDNVNQTQRDKPVENPGIAARFTRDPDAVVAKVRH
+ AFESDKPKLRYPVTLVTWAVIALKRILPGRMLDKILQS"
+ misc_feature 2350191..2350958
+ /locus_tag="SARI_02428"
+ /note="oxidoreductase; Provisional; Region: PRK08017"
+ /db_xref="CDD:181198"
+ misc_feature 2350197..2350898
+ /locus_tag="SARI_02428"
+ /note="17beta hydroxysteroid dehydrogenase-like, classical
+ (c) SDRs; Region: 17beta-HSD-like_SDR_c; cd05374"
+ /db_xref="CDD:187632"
+ misc_feature order(2350215..2350217,2350221..2350232,2350290..2350292,
+ 2350344..2350352,2350431..2350442,2350500..2350502,
+ 2350581..2350589,2350626..2350628,2350638..2350640,
+ 2350725..2350727,2350731..2350739)
+ /locus_tag="SARI_02428"
+ /note="NADP binding site [chemical binding]; other site"
+ /db_xref="CDD:187632"
+ misc_feature order(2350503..2350505,2350587..2350589,2350626..2350628,
+ 2350638..2350640)
+ /locus_tag="SARI_02428"
+ /note="active site"
+ /db_xref="CDD:187632"
+ misc_feature order(2350587..2350595,2350608..2350610,2350626..2350628,
+ 2350719..2350724,2350740..2350742,2350893..2350895)
+ /locus_tag="SARI_02428"
+ /note="steroid binding site; other site"
+ /db_xref="CDD:187632"
+ gene 2350994..2351875
+ /locus_tag="SARI_02429"
+ CDS 2350994..2351875
+ /locus_tag="SARI_02429"
+ /inference="protein motif:Gene3D:IPR012335"
+ /inference="protein motif:HMMPfam:IPR013766"
+ /inference="protein motif:superfamily:IPR012336"
+ /inference="similar to AA sequence:INSD:CAD04989.1"
+ /note="'KEGG: eci:UTI89_C0527 4.3e-140 ybbN; putative
+ THIoredoxin-like protein K05838;
+ COG: COG3118 Thioredoxin domain-containing protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571433.1"
+ /db_xref="GI:161504321"
+ /db_xref="InterPro:IPR012335"
+ /db_xref="InterPro:IPR012336"
+ /db_xref="InterPro:IPR013766"
+ /translation="MTQTKESDAMSVQNIVNINESNLQQTLEQSRTTPVLFYFWSERS
+ QHCLQLTPVLESLVAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVYLFQNGQPVDGF
+ QGPQPEEAIRDLLDKVLPREEELKAQQAMQLMQEGNYIDALPLLKDAWQLSHQNSEIG
+ LLLAETHIALNRSEEAEAVLKTIPLQDQDTRYQGLVAQIDLLKQAADTPEIQQLQQQV
+ AENPQDAALATQLALQLHQVGRNEEALELLFSHLRKDLAAAEGQTRKTFQEILAALGT
+ GDALASKYRRQLYALLY"
+ misc_feature 2350994..2351872
+ /locus_tag="SARI_02429"
+ /note="Thioredoxin domain-containing protein
+ [Posttranslational modification, protein turnover,
+ chaperones]; Region: COG3118"
+ /db_xref="CDD:225660"
+ misc_feature 2351054..2351341
+ /locus_tag="SARI_02429"
+ /note="ybbN protein family; ybbN is a hypothetical protein
+ containing a redox-inactive TRX-like domain. Its gene has
+ been sequenced from several gammaproteobacteria and
+ actinobacteria; Region: ybbN; cd02956"
+ /db_xref="CDD:239254"
+ gene complement(2351962..2352741)
+ /locus_tag="SARI_02430"
+ CDS complement(2351962..2352741)
+ /locus_tag="SARI_02430"
+ /inference="protein motif:HMMPfam:IPR005226"
+ /inference="protein motif:HMMTigr:IPR005226"
+ /inference="similar to AA sequence:REFSEQ:NP_455098.1"
+ /note="'COG: COG0390 ABC-type uncharacterized transport
+ system, permease component;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571434.1"
+ /db_xref="GI:161504322"
+ /db_xref="InterPro:IPR005226"
+ /translation="MNEHNITNTSLALSMLLVVIAILISHKEKLTLEKDILWSVGRAV
+ IQLIIVGYVLKYIFGVNHAALTLLMVLFICFNAAWNAQKRSKYIDKAFLSSFIAITVG
+ AGLTLAVLVLTGSIEFAPMQVIPVAGMVAGNAMVAVGLCYNQLGLRFHSEQQQIQEKL
+ SLGATPKMASAGLIRDSIRASLIPTIDSAKTVGLVSLPGMMSGLIFAGIDPVKAIKYQ
+ IMVTFMLLSTASLSTIIACYLTYRKFYNSRHQLAATQLKKS"
+ misc_feature complement(2351977..2352741)
+ /locus_tag="SARI_02430"
+ /note="ABC-type uncharacterized transport system, permease
+ component [General function prediction only]; Region:
+ COG0390"
+ /db_xref="CDD:223467"
+ gene complement(2352728..2353405)
+ /locus_tag="SARI_02431"
+ CDS complement(2352728..2353405)
+ /locus_tag="SARI_02431"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:INSD:AAL19456.1"
+ /note="'KEGG: psb:Psyr_0081 1.2e-27 ABC transporter
+ K02045;
+ COG: COG4619 ABC-type uncharacterized transport system,
+ ATPase component;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative ABC transporter ATP-binding protein
+ YbbL"
+ /protein_id="YP_001571435.1"
+ /db_xref="GI:161504323"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MKERNMLLELKQVGYQTETTKILNNISFTLQHGEFKLITGPSGC
+ GKSTLLKIVASLVSPDVGVILFEGQDITTLSPETYRQQVSYCAQTPALFGDTVYDNLI
+ FPWQIRHQRPQPKAFADSLARFELPETILQKPITALSGGEKQRVALIRNLQFLPKILL
+ LDEITSALDEHNKRNVNDIIHRYVRDKQIAVLWVTHDTDEIQHADKVITLTPSAGEMQ
+ EARYERA"
+ misc_feature complement(2352731..2353405)
+ /locus_tag="SARI_02431"
+ /note="putative ABC transporter ATP-binding protein YbbL;
+ Provisional; Region: PRK10247"
+ /db_xref="CDD:182331"
+ misc_feature complement(2352776..2353384)
+ /locus_tag="SARI_02431"
+ /note="ATP-binding cassette domain of multidrug resistance
+ protein-like transporters; Region: ABCC_MRP_Like; cd03228"
+ /db_xref="CDD:213195"
+ misc_feature complement(2353265..2353288)
+ /locus_tag="SARI_02431"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213195"
+ misc_feature complement(order(2352818..2352820,2352917..2352922,
+ 2353142..2353144,2353262..2353270,2353274..2353279))
+ /locus_tag="SARI_02431"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213195"
+ misc_feature complement(2353142..2353153)
+ /locus_tag="SARI_02431"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213195"
+ misc_feature complement(2352968..2352994)
+ /locus_tag="SARI_02431"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213195"
+ misc_feature complement(2352917..2352934)
+ /locus_tag="SARI_02431"
+ /note="Walker B; other site"
+ /db_xref="CDD:213195"
+ misc_feature complement(2352899..2352910)
+ /locus_tag="SARI_02431"
+ /note="D-loop; other site"
+ /db_xref="CDD:213195"
+ misc_feature complement(2352812..2352832)
+ /locus_tag="SARI_02431"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213195"
+ gene 2353525..2354469
+ /locus_tag="SARI_02432"
+ CDS 2353525..2354469
+ /locus_tag="SARI_02432"
+ /inference="protein motif:FPrintScan:IPR001972"
+ /inference="protein motif:HMMPfam:IPR001107"
+ /inference="protein motif:HMMSmart:IPR001107"
+ /inference="protein motif:ScanRegExp:IPR001972"
+ /inference="similar to AA sequence:INSD:AAL19455.1"
+ /note="'KEGG: reh:H16_A2036 4.4e-58 membrane protease
+ subunits, stomatin/prohibitin homologs K01423;
+ COG: COG0330 Membrane protease subunits,
+ stomatin/prohibitin homologs;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571436.1"
+ /db_xref="GI:161504324"
+ /db_xref="InterPro:IPR001107"
+ /db_xref="InterPro:IPR001972"
+ /translation="MDNATGGLTMLILIPILIFVALVIVGAGVKIVPQGYQWTVERFG
+ RYTKTLQPGLSLVVPFMDRIGRKINMMEQVLDIPSQEVISKDNANVTIDAVCFIQVID
+ APRAAYEVSNLELAIINLTMTNIRTVLGSMELDEMLSQRDSINTRLLHIVDEATNPWG
+ IKVTRIEIRDVRPPAELISSMNAQMKAERTKRAYILEAEGVRQAEILKAEGEKQSQIL
+ KAEGERQSAFLQAEARERSAEAEARATQMVSEAIAAGDIQAVNYFVAQKYTEALQQIG
+ SANNSKVVMMPLDASSLMGAIAGISELVKDSASERKKP"
+ misc_feature 2353552..2354430
+ /locus_tag="SARI_02432"
+ /note="Membrane protease subunits, stomatin/prohibitin
+ homologs [Posttranslational modification, protein
+ turnover, chaperones]; Region: HflC; COG0330"
+ /db_xref="CDD:223407"
+ misc_feature 2353618..2354187
+ /locus_tag="SARI_02432"
+ /note="Band_7_stomatin_like: A subgroup of the band 7
+ domain of flotillin (reggie) like proteins similar to
+ stomatin and podicin (two lipid raft-associated integral
+ membrane proteins). Individual proteins of this band 7
+ domain family may cluster to form...; Region:
+ Band_7_stomatin_like; cd03403"
+ /db_xref="CDD:239497"
+ gene 2354466..2354927
+ /locus_tag="SARI_02433"
+ CDS 2354466..2354927
+ /locus_tag="SARI_02433"
+ /inference="protein motif:HMMPfam:IPR002810"
+ /inference="similar to AA sequence:INSD:AAX64447.1"
+ /note="'COG: COG1585 Membrane protein implicated in
+ regulation of membrane protease activity;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571437.1"
+ /db_xref="GI:161504325"
+ /db_xref="InterPro:IPR002810"
+ /translation="MIAMILVHPHIFWLSLGGLLLAAEMLGGNGYMLWSGVAAAITGL
+ TVWLLPLGWEWQGVLFAALTLLAAWLWWRWLARRVREQKPTDRRLNQRGQQLVGRRFM
+ LNAALVNGRGHMRVGDSSWPVCADEDMCAGTHVEVIAVEGITLRVRAVSST"
+ misc_feature 2354556..2354915
+ /locus_tag="SARI_02433"
+ /note="Membrane protein implicated in regulation of
+ membrane protease activity [Posttranslational
+ modification, protein turnover, chaperones / Intracellular
+ trafficking and secretion]; Region: COG1585"
+ /db_xref="CDD:224501"
+ gene complement(2354919..2355335)
+ /locus_tag="SARI_02434"
+ CDS complement(2354919..2355335)
+ /locus_tag="SARI_02434"
+ /inference="protein motif:FPrintScan:IPR000551"
+ /inference="protein motif:HMMPfam:IPR000551"
+ /inference="protein motif:HMMSmart:IPR000551"
+ /inference="protein motif:HMMTigr:IPR011789"
+ /inference="protein motif:ScanRegExp:IPR000551"
+ /inference="protein motif:superfamily:IPR009061"
+ /inference="similar to AA sequence:INSD:AAL11724.1"
+ /note="activator of copper-responsive regulon genes"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional regulator CueR"
+ /protein_id="YP_001571438.1"
+ /db_xref="GI:161504326"
+ /db_xref="InterPro:IPR000551"
+ /db_xref="InterPro:IPR009061"
+ /db_xref="InterPro:IPR011789"
+ /translation="MNISDVAKKTGLTSKAIRFYEEKGLVTPPLRSENGYRTYTQKHL
+ NELTLLRQARQVGFNLEECGELVNLFNDPRRHSADVKKRTLEKVAEIERHISELQSMR
+ DQLLALAERCPGDDSADCPIIDNLSGCCHHKAQKSR"
+ misc_feature complement(2354931..2355335)
+ /locus_tag="SARI_02434"
+ /note="DNA-binding transcriptional regulator CueR;
+ Provisional; Region: PRK10227"
+ /db_xref="CDD:182320"
+ misc_feature complement(2354955..2355335)
+ /locus_tag="SARI_02434"
+ /note="Helix-Turn-Helix DNA binding domain of CueR-like
+ transcription regulators; Region: HTH_CueR; cd01108"
+ /db_xref="CDD:133383"
+ misc_feature complement(order(2355225..2355233,2355282..2355284,
+ 2355324..2355332))
+ /locus_tag="SARI_02434"
+ /note="DNA binding residues [nucleotide binding]"
+ /db_xref="CDD:133383"
+ misc_feature complement(order(2354958..2354963,2354970..2354972,
+ 2354976..2354978,2354982..2354996,2355009..2355011,
+ 2355030..2355035,2355042..2355044,2355054..2355056,
+ 2355072..2355074,2355084..2355086,2355093..2355095,
+ 2355102..2355107,2355126..2355128,2355138..2355140,
+ 2355165..2355170,2355180..2355182,2355189..2355191))
+ /locus_tag="SARI_02434"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:133383"
+ misc_feature complement(order(2354976..2354978,2355000..2355002,
+ 2355105..2355107))
+ /locus_tag="SARI_02434"
+ /note="copper binding site [ion binding]; other site"
+ /db_xref="CDD:133383"
+ gene 2355418..2357946
+ /gene="copA"
+ /locus_tag="SARI_02435"
+ CDS 2355418..2357946
+ /gene="copA"
+ /locus_tag="SARI_02435"
+ /inference="protein motif:HMMPanther:IPR001757"
+ /inference="protein motif:HMMPfam:IPR005834"
+ /inference="protein motif:HMMPfam:IPR006121"
+ /inference="protein motif:HMMPfam:IPR008250"
+ /inference="protein motif:HMMTigr:IPR001757"
+ /inference="protein motif:HMMTigr:IPR006403"
+ /inference="protein motif:HMMTigr:IPR006416"
+ /inference="protein motif:ScanRegExp:IPR000150"
+ /inference="protein motif:ScanRegExp:IPR001757"
+ /inference="protein motif:ScanRegExp:IPR006121"
+ /inference="protein motif:superfamily:IPR006121"
+ /note="'KEGG: sty:STY0544 0. ybaR; copper-transporting
+ ATPase K01533;
+ COG: COG2217 Cation transport ATPase;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="copper exporting ATPase"
+ /protein_id="YP_001571439.1"
+ /db_xref="GI:161504327"
+ /db_xref="InterPro:IPR000150"
+ /db_xref="InterPro:IPR001757"
+ /db_xref="InterPro:IPR005834"
+ /db_xref="InterPro:IPR006121"
+ /db_xref="InterPro:IPR006403"
+ /db_xref="InterPro:IPR006416"
+ /db_xref="InterPro:IPR008250"
+ /translation="MTNHKGVFTMSQTIDLTLDGLSCGHCVKRVKESLEQRPDVELAD
+ VTVTEAHVTGTASADALIETIKQAGYGATLSYPKAKPLTESSIPSEALAAVPHELPVA
+ TADEESQQLLLSGMSCASCVTRVQHALQSVPGVTQARVNLAERTALVMGSASAADLVQ
+ AVEKAGYGAEAIEDDIKRRERQQETAIATMKRFRWQAIVALAVGIPVMVWGMIGDNMM
+ VTGDNRSLWLAIGVITLAVMVFAGGHFYRNAWKSLLNGTATMDTLVALGTGVAWLYSM
+ SVNLWPQWFPMEARHLYYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTAR
+ VVTEDGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGEAWLDEAMLTGEPIPQQKGE
+ GDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAIFVP
+ VVVAIALISAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAE
+ FGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGVDEAQALRLAAALEQ
+ GSSHPLAHAILEKAGDNKLPQVNGFRTLRGLGVSGEAEGHQLLLGNQALLNEQHVASD
+ DMTAEITAQASQGSTPVLLAIDGKAAALLAVRDPLRNDSIAALERLHNAGYRLVMLTG
+ DNPTTANAIAKEAGIDEVIAGVLPDGKADAIKRLQSQGRQVAMVGDGINDAPALAQAD
+ VGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSIGIP
+ VAAGILWPFTGTLLNPVVAGAAMALSSITVVSNANRLLRFKPKA"
+ misc_feature 2355445..2357943
+ /gene="copA"
+ /locus_tag="SARI_02435"
+ /note="copper exporting ATPase; Provisional; Region: copA;
+ PRK10671"
+ /db_xref="CDD:182635"
+ misc_feature 2355460..2355636
+ /gene="copA"
+ /locus_tag="SARI_02435"
+ /note="Heavy-metal-associated domain (HMA) is a conserved
+ domain of approximately 30 amino acid residues found in a
+ number of proteins that transport or detoxify heavy
+ metals, for example, the CPx-type heavy metal ATPases and
+ copper chaperones. HMA domain...; Region: HMA; cd00371"
+ /db_xref="CDD:238219"
+ misc_feature order(2355478..2355486,2355493..2355495)
+ /gene="copA"
+ /locus_tag="SARI_02435"
+ /note="metal-binding site [ion binding]"
+ /db_xref="CDD:238219"
+ misc_feature 2355745..2355927
+ /gene="copA"
+ /locus_tag="SARI_02435"
+ /note="Heavy-metal-associated domain (HMA) is a conserved
+ domain of approximately 30 amino acid residues found in a
+ number of proteins that transport or detoxify heavy
+ metals, for example, the CPx-type heavy metal ATPases and
+ copper chaperones. HMA domain...; Region: HMA; cd00371"
+ /db_xref="CDD:238219"
+ misc_feature order(2355763..2355771,2355778..2355780)
+ /gene="copA"
+ /locus_tag="SARI_02435"
+ /note="metal-binding site [ion binding]"
+ /db_xref="CDD:238219"
+ misc_feature 2356312..2356980
+ /gene="copA"
+ /locus_tag="SARI_02435"
+ /note="E1-E2 ATPase; Region: E1-E2_ATPase; pfam00122"
+ /db_xref="CDD:215733"
+ misc_feature 2357350..2357652
+ /gene="copA"
+ /locus_tag="SARI_02435"
+ /note="Haloacid dehalogenase-like hydrolases. The haloacid
+ dehalogenase-like (HAD) superfamily includes L-2-haloacid
+ dehalogenase, epoxide hydrolase, phosphoserine
+ phosphatase, phosphomannomutase, phosphoglycolate
+ phosphatase, P-type ATPase, and many others; Region:
+ HAD_like; cd01427"
+ /db_xref="CDD:119389"
+ misc_feature 2357458..2357460
+ /gene="copA"
+ /locus_tag="SARI_02435"
+ /note="motif II; other site"
+ /db_xref="CDD:119389"
+ gene 2358093..2358887
+ /locus_tag="SARI_02436"
+ CDS 2358093..2358887
+ /locus_tag="SARI_02436"
+ /inference="protein motif:HMMPfam:IPR010891"
+ /inference="similar to AA sequence:REFSEQ:ZP_00709964.1"
+ /note="'COG: COG3735 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571440.1"
+ /db_xref="GI:161504328"
+ /db_xref="InterPro:IPR010891"
+ /translation="MDLLYRVKTLWAALRGNHYTWPAIDIFLPGNRDFHLVGSIHMGT
+ RDMAPLPARLLKKLKRADALIVEADVSGHDTPFASLPTCAALEERISEEQLHSLRKIV
+ EELGISLSLFSTQPLWQIAMILQATQAQQLGLRPEYGIDYQLLQAAKQTQKPVIELEG
+ VASQIALLCQLPDNGLALLDDTLTHWHTNARQLQQMMSWWLKMPQQHGDITLPRTFSQ
+ SLYDVLMHQRNLAWRDRLNAMPPGQYVVAVGALHLYGEGNLPELMR"
+ misc_feature 2358093..2358884
+ /locus_tag="SARI_02436"
+ /note="TraB family; Region: TraB; cl12050"
+ /db_xref="CDD:245852"
+ gene complement(2358886..2358965)
+ /locus_tag="SARI_02437"
+ misc_RNA complement(2358886..2358965)
+ /locus_tag="SARI_02437"
+ /product="SroB RNA"
+ /inference="nucleotide motif:Rfam:RF00368"
+ /note="Rfam score 88.63"
+ gene 2359089..2359568
+ /locus_tag="SARI_02438"
+ CDS 2359089..2359568
+ /locus_tag="SARI_02438"
+ /inference="protein motif:HMMPfam:IPR007214"
+ /inference="protein motif:HMMTigr:IPR004369"
+ /inference="similar to AA sequence:INSD:CAD04980.1"
+ /note="'KEGG: gme:Gmet_1354 0.0027 prolyl-tRNA synthetase
+ K01881;
+ COG: COG2606 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571441.1"
+ /db_xref="GI:161504329"
+ /db_xref="InterPro:IPR004369"
+ /db_xref="InterPro:IPR007214"
+ /translation="MTPAVKLLEKNKVPFNIHTYDHDPNETNFGDEVVRKLGLNADQV
+ YKTLLVAVNGDMKQLAVAVTPVAGQLDLKKVAKALGAKKVDMADPMVAQRTTGYLVGG
+ ISPLGQKKRLPTLIDAPARTFATIYVSGGKRGLDIELAADDLAAILDAKFADIARRD"
+ misc_feature 2359089..2359490
+ /locus_tag="SARI_02438"
+ /note="This CD includes cysteinyl-tRNA(Pro) deacylases
+ from Haemophilus influenzae and Escherichia coli and other
+ related bacterial proteins. These trans-acting,
+ single-domain proteins are homologs of ProX and also the
+ cis-acting prolyl-tRNA synthetase (ProRS)...; Region:
+ YbaK_deacylase; cd00002"
+ /db_xref="CDD:237976"
+ misc_feature order(2359224..2359226,2359389..2359394,2359473..2359475)
+ /locus_tag="SARI_02438"
+ /note="putative deacylase active site [active]"
+ /db_xref="CDD:237976"
+ gene complement(2359637..2361289)
+ /gene="ushA"
+ /locus_tag="SARI_02439"
+ CDS complement(2359637..2361289)
+ /gene="ushA"
+ /locus_tag="SARI_02439"
+ /inference="protein motif:Gene3D:IPR008334"
+ /inference="protein motif:HMMPanther:IPR006179"
+ /inference="protein motif:HMMPfam:IPR004843"
+ /inference="protein motif:HMMPfam:IPR008334"
+ /inference="protein motif:ScanRegExp:IPR006146"
+ /inference="protein motif:superfamily:IPR008334"
+ /inference="similar to AA sequence:INSD:AAF05575.1"
+ /note="'catalyzes the degradation of periplasmic
+ UDP-glucose to uridine, glucose-1-phosphate and inorganic
+ phosphate; specific for uridine nucleotides'"
+ /codon_start=1
+ /transl_table=11
+ /product="bifunctional UDP-sugar hydrolase/5'-nucleotidase
+ periplasmic precursor"
+ /protein_id="YP_001571442.1"
+ /db_xref="GI:161504330"
+ /db_xref="InterPro:IPR004843"
+ /db_xref="InterPro:IPR006146"
+ /db_xref="InterPro:IPR006179"
+ /db_xref="InterPro:IPR008334"
+ /translation="MKFLKRGVALALLAAFALVSQSVQAYEKDKTYKITILHTNDHHG
+ HFWRSEYGEYGLAAQKTLVDSIRKEVAQEGGSVLLLSGGDINTGVPESDLQDAEPDFR
+ GMNLIGYDAMAVGNHEFDNPLTVLRQQEKWAKFPFLSANIYQKSTGERLFKPWAIFTR
+ QDIKIAVIGLTTDDTAKIGNPEYFTDIEFRKPAEEAKVVIQELNMNEKPDVIIAATHM
+ GHYDNGDHGSNAPGDVEMARSLPAGSLAMIVGGHSQDPVCMASENKKQVNYVPGTPCA
+ PDKQNGIWIVQAHEWGKYVGRADFEFRNGEMKMVNYQLIPVNLKKKVTWDNGKSERVL
+ YTPEIAENPQMLSLLTPFQNKGKAQLEVKIGSVNGLLEGDRSKVRFVQTNMGRVILAA
+ QIARTGADFGVMSGGGIRDSIESGDITYKSVLRVQPFGNIVVYADMSGKEVIDYLTAV
+ AQMKPDSGAYPQFANVSFVAKEGKLTDLKIKGEPIDPAKTYRMATLSFNATGGDGYPR
+ IDNKPGYVNTGFIDAEVLKEFIQQNSPLDAAAFTPKGEVSWL"
+ misc_feature complement(2359643..2361289)
+ /gene="ushA"
+ /locus_tag="SARI_02439"
+ /note="bifunctional UDP-sugar
+ hydrolase/5'-nucleotidase periplasmic precursor;
+ Reviewed; Region: ushA; PRK09558"
+ /db_xref="CDD:236566"
+ misc_feature complement(2360330..2361190)
+ /gene="ushA"
+ /locus_tag="SARI_02439"
+ /note="Escherichia coli UshA and related proteins,
+ N-terminal metallophosphatase domain; Region: MPP_UshA_N;
+ cd07405"
+ /db_xref="CDD:163648"
+ misc_feature complement(order(2360528..2360530,2360534..2360536,
+ 2360639..2360641,2360939..2360944,2361038..2361040,
+ 2361161..2361163,2361167..2361169))
+ /gene="ushA"
+ /locus_tag="SARI_02439"
+ /note="active site"
+ /db_xref="CDD:163648"
+ misc_feature complement(order(2360528..2360530,2360534..2360536,
+ 2360639..2360641,2360942..2360944,2361038..2361040,
+ 2361161..2361163,2361167..2361169))
+ /gene="ushA"
+ /locus_tag="SARI_02439"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:163648"
+ misc_feature complement(2359769..2360179)
+ /gene="ushA"
+ /locus_tag="SARI_02439"
+ /note="5'-nucleotidase, C-terminal domain; Region:
+ 5_nucleotid_C; pfam02872"
+ /db_xref="CDD:217260"
+ gene 2361461..2362681
+ /locus_tag="SARI_02440"
+ CDS 2361461..2362681
+ /locus_tag="SARI_02440"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="similar to AA sequence:REFSEQ:YP_215522.1"
+ /note="'COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571443.1"
+ /db_xref="GI:161504331"
+ /db_xref="InterPro:IPR011701"
+ /translation="MAMSEPPQPLASAPVTAAKARTSFGILGAISLSHLLNDMIQSLI
+ LAIYPLLQAEFSLSFVQIGLITLTFQLASSLLQPVVGYWTDKYPMPWSLPVGMCFTLS
+ GLVLLAMAGSFGGVLLAAALVGTGSSVFHPESSRVARMASGGRHGLAQSIFQVGGNFG
+ SSLGPLLAAVIIAPYGKGNVAWFVLAALLAIVVLAQISRWYAAQHRIAKGKPKAIIAN
+ PLPRNKVVLAVSVLLLLIFSKYFYMASISSYYTFYLMQKFGLSIQNAQLHLFAFLFAV
+ AAGTVIGGPVGDKIGRKYVIWGSILGVAPFTLVLPYATLYWTGILTVIIGFILASAFS
+ AILVYAQELLPGRIGMVSGLFFGFAFGMGGLGAAVLGLIADHTSIYLVYKICAFLPLL
+ GILTIFLPDNRHKA"
+ misc_feature 2361539..>2361988
+ /locus_tag="SARI_02440"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature 2361548..2362501
+ /locus_tag="SARI_02440"
+ /note="Major Facilitator Superfamily; Region: MFS_1;
+ pfam07690"
+ /db_xref="CDD:219516"
+ misc_feature order(2361581..2361583,2361590..2361598,2361602..2361607,
+ 2361656..2361658,2361665..2361670,2361677..2361679,
+ 2361689..2361694,2361698..2361703,2361839..2361844,
+ 2361851..2361856,2361863..2361868,2361872..2361874,
+ 2361908..2361913,2361920..2361925,2361941..2361943)
+ /locus_tag="SARI_02440"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene complement(2362693..2362818)
+ /locus_tag="SARI_02441"
+ CDS complement(2362693..2362818)
+ /locus_tag="SARI_02441"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571444.1"
+ /db_xref="GI:161504332"
+ /translation="MVVFYKKIRSEGKKSTERKSDKYGMDKARWHQDVQAVKAYL"
+ gene 2362896..2364572
+ /locus_tag="SARI_02442"
+ CDS 2362896..2364572
+ /locus_tag="SARI_02442"
+ /inference="protein motif:HMMPfam:IPR003148"
+ /inference="protein motif:HMMPfam:IPR006153"
+ /inference="protein motif:HMMTigr:IPR004771"
+ /inference="similar to AA sequence:REFSEQ:NP_455088.1"
+ /note="YbaL; member of the CPA-2 family of antiporters;
+ uncharacterized protein"
+ /codon_start=1
+ /transl_table=11
+ /product="putative cation:proton antiport protein"
+ /protein_id="YP_001571445.1"
+ /db_xref="GI:161504333"
+ /db_xref="InterPro:IPR003148"
+ /db_xref="InterPro:IPR004771"
+ /db_xref="InterPro:IPR006153"
+ /translation="MHHATPLITTIVGGLVLAFILGMIANKLRISPLVGYLLAGVLAG
+ PFTPGFVADTKLAPELAELGVILLMFGVGLHFSLKDLMAVKSIAIPGAVAQIAVATLL
+ GMALSAVLGWSLMTGIVFGLCLSTASTVVLLRALEERQLLDSQRGQIAIGWLIVEDLV
+ MVLTLVLMPAVAGMVEKGDVGIASLAVDMGMTIGKVVAFIAIMMLVGRRLVPWIMARS
+ AATGSRELFTLSVLALALGIAFGAVELFDVSFALGAFFAGMVLNESELSHRAAHDTLP
+ LRDAFAVLFFVSVGMLFDPLVLIQQPLAVLATLAIIVFGKSIAAFFLVRMFGHSPRTA
+ LTIAASLAQIGEFAFILAGLGMALNLLPQAGQNLVLAGAILSIMLNPVVFTLLEKYLA
+ KTETLEEHTLEEAIEEEKQIPVDICNHALLVGFGRVGSLLGEKLLAAGIPLVVIETSR
+ TRVDELRERGIRAVLGNAANEEIMNLAHLDCARWLLLTIPNGYEAGEIVASAREKCPG
+ IEIIARAHYDDEVNYITERGANQVVMGEREIARAMLELLETPPAGNIAPG"
+ misc_feature 2362896..2364569
+ /locus_tag="SARI_02442"
+ /note="putative cation:proton antiport protein;
+ Provisional; Region: PRK10669"
+ /db_xref="CDD:182633"
+ misc_feature 2362896..2364065
+ /locus_tag="SARI_02442"
+ /note="Kef-type K+ transport system, predicted NAD-binding
+ component [Inorganic ion transport and metabolism];
+ Region: RosB; COG4651"
+ /db_xref="CDD:226998"
+ misc_feature 2364156..2364497
+ /locus_tag="SARI_02442"
+ /note="TrkA-N domain; Region: TrkA_N; pfam02254"
+ /db_xref="CDD:216949"
+ gene complement(2364668..2365972)
+ /locus_tag="SARI_02443"
+ CDS complement(2364668..2365972)
+ /locus_tag="SARI_02443"
+ /inference="protein motif:HMMPfam:IPR011611"
+ /inference="protein motif:ScanRegExp:IPR002173"
+ /inference="similar to AA sequence:INSD:AAV78117.1"
+ /note="'KEGG: stm:STM0491 6.8e-236 gsk; inosine-guanosine
+ kinase K00892;
+ COG: COG0524 Sugar kinases, ribokinase family;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="inosine-guanosine kinase"
+ /protein_id="YP_001571446.1"
+ /db_xref="GI:161504334"
+ /db_xref="InterPro:IPR002173"
+ /db_xref="InterPro:IPR011611"
+ /translation="MKFPGKRKSKHYFPVNARDPLLQQIQPEQETNASWVVGIDQTLV
+ DIEAKVDDDFITRYGLSAGHSLVIEDEVAEKLYQELTRENLITHQFAGGTIGNTMHNY
+ SVLADDRSVLLGVMCSNIEIGSYAYRYLCNTSSRTDLNYLQAVDGPIGRCFTLIGESG
+ ERTFAISPGHMNQLRAESIPEAVIAGASALVLTSYLVRCKPGEPMPDATMKAIEYAKK
+ HNVPVVMTLGTKFVIADNPQWWQAFLKENVSILAMNEEEAEALTGENDPLLAADKALD
+ WVDLVLCTAGPIGLYMAGFTEEEAKRKTQHPLLPGAIAEFNQYEFSRAMRHKDCMNPL
+ RIYSHIAPYMGGPEKIMNTNGAGDGALAALLHDITANSYHRSNVPNSSKHKFTWLTYS
+ SLAQVCKYANRVSYQVLNQHSPRLTRGLPEREDSLEESYWER"
+ misc_feature complement(2364671..2365972)
+ /locus_tag="SARI_02443"
+ /note="inosine/guanosine kinase; Provisional; Region:
+ PRK15074"
+ /db_xref="CDD:185033"
+ misc_feature complement(2364677..2365867)
+ /locus_tag="SARI_02443"
+ /note="Sugar kinases, ribokinase family [Carbohydrate
+ transport and metabolism]; Region: RbsK; COG0524"
+ /db_xref="CDD:223598"
+ gene 2366098..2367096
+ /locus_tag="SARI_02444"
+ CDS 2366098..2367096
+ /locus_tag="SARI_02444"
+ /inference="protein motif:HMMPfam:IPR013094"
+ /inference="similar to AA sequence:INSD:AAV78118.1"
+ /note="'KEGG: spt:SPA2232 9.4e-168 aes; acetyl esterase
+ K01066;
+ COG: COG0657 Esterase/lipase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="acetyl esterase"
+ /protein_id="YP_001571447.1"
+ /db_xref="GI:161504335"
+ /db_xref="InterPro:IPR013094"
+ /translation="MVHFHKERFMKPENKIPVLTRLSDEMKAVVNFQQPGLPPWPADG
+ DIETQRQYYLLERRFWNADAPPMPARTCAVPMPYGDVTTRIYSPQPTSQATLYYLHGG
+ GFILGNLDTHDRIMRLLARYTGCTVIGIDYSLSPQARYPQAIEETVAVCRYFSQHANE
+ YSLNVEKIGFAGDSAGAMLSLASALWLRDKQISCGNVIAILLWYGLYGLQDSVSRRLF
+ GGAWDGLTREDLEMYEKAYLRNEEDRESPWYCLFNNDLTRNVPPCFIASAEFDPLIDD
+ SRLLYQTLQAHRQPCEYKMYPGTLHAFLHYSRMMKSADDALQDGARFFIARIKMLR"
+ misc_feature 2366134..2367087
+ /locus_tag="SARI_02444"
+ /note="acetyl esterase; Provisional; Region: PRK10162"
+ /db_xref="CDD:236660"
+ misc_feature <2366365..>2366859
+ /locus_tag="SARI_02444"
+ /note="Protein of unknown function (DUF2424); Region:
+ DUF2424; pfam10340"
+ /db_xref="CDD:220701"
+ gene complement(2367093..2368055)
+ /gene="hemH"
+ /locus_tag="SARI_02445"
+ CDS complement(2367093..2368055)
+ /gene="hemH"
+ /locus_tag="SARI_02445"
+ /inference="protein motif:BlastProDom:IPR001015"
+ /inference="protein motif:HMMPanther:IPR001015"
+ /inference="protein motif:HMMPfam:IPR001015"
+ /inference="protein motif:HMMTigr:IPR001015"
+ /inference="protein motif:ScanRegExp:IPR001015"
+ /inference="similar to AA sequence:REFSEQ:NP_459484.1"
+ /note="protoheme ferro-lyase; catalyzes the insertion of a
+ ferrous ion into protoporphyrin IX to form protoheme;
+ involved in protoheme biosynthesis; in some organisms this
+ protein is membrane-associated while in others it is
+ cytosolic"
+ /codon_start=1
+ /transl_table=11
+ /product="ferrochelatase"
+ /protein_id="YP_001571448.1"
+ /db_xref="GI:161504336"
+ /db_xref="InterPro:IPR001015"
+ /translation="MRQTKTGILLANLGTPDAPTPEAVKRYLKQFLSDRRVVDTPRPL
+ WWPLLRGVILPLRSPRVAKLYQSIWMDGGSPLMVYSREQQQGLAARLPDTPVALGMSY
+ GSPSLESAVDELLASDVDHIVVLPLYPQYSCSTVGAVWDELGRILARKRRIPGISFIR
+ DYADDGAYIDALAKSARESFARHGEPDLLLLSYHGIPQRYADEGDDYPQRCRDTTREL
+ VSALGLPPEKVMMTFQSRFGREPWLTPYTDETLKMLGEKGTGHIQVMCPGFAADCLET
+ LEEIAEQNREIFLEAGGKKYAYIPALNATPEHIDMMLKLTAPYR"
+ misc_feature complement(2367111..2368055)
+ /gene="hemH"
+ /locus_tag="SARI_02445"
+ /note="ferrochelatase; Reviewed; Region: hemH; PRK00035"
+ /db_xref="CDD:234585"
+ misc_feature complement(2367561..2368040)
+ /gene="hemH"
+ /locus_tag="SARI_02445"
+ /note="Ferrochelatase, N-terminal domain: Ferrochelatase
+ (protoheme ferrolyase or HemH) is the terminal enzyme of
+ the heme biosynthetic pathway. It catalyzes the insertion
+ of ferrous iron into the protoporphyrin IX ring yielding
+ protoheme. This enzyme is...; Region: Ferrochelatase_N;
+ cd03411"
+ /db_xref="CDD:239504"
+ misc_feature complement(order(2367567..2367569,2367573..2367575,
+ 2367657..2367668,2367675..2367677,2367807..2367809,
+ 2367819..2367821,2367852..2367854,2367864..2367866,
+ 2368020..2368022))
+ /gene="hemH"
+ /locus_tag="SARI_02445"
+ /note="C-terminal domain interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:239504"
+ misc_feature complement(order(2367651..2367656,2367957..2367965,
+ 2367975..2367977,2368017..2368019))
+ /gene="hemH"
+ /locus_tag="SARI_02445"
+ /note="active site"
+ /db_xref="CDD:239504"
+ misc_feature complement(2367147..2367548)
+ /gene="hemH"
+ /locus_tag="SARI_02445"
+ /note="Ferrochelatase, C-terminal domain: Ferrochelatase
+ (protoheme ferrolyase or HemH) is the terminal enzyme of
+ the heme biosynthetic pathway. It catalyzes the insertion
+ of ferrous iron into the protoporphyrin IX ring yielding
+ protoheme. This enzyme is...; Region: Ferrochelatase_C;
+ cd00419"
+ /db_xref="CDD:238240"
+ misc_feature complement(order(2367231..2367233,2367330..2367332,
+ 2367459..2367461,2367474..2367476))
+ /gene="hemH"
+ /locus_tag="SARI_02445"
+ /note="active site"
+ /db_xref="CDD:238240"
+ misc_feature complement(order(2367147..2367149,2367222..2367224,
+ 2367234..2367236,2367240..2367248,2367252..2367254,
+ 2367414..2367416,2367426..2367428,2367435..2367443))
+ /gene="hemH"
+ /locus_tag="SARI_02445"
+ /note="N-terminal domain interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:238240"
+ gene complement(2368182..2368826)
+ /gene="adk"
+ /locus_tag="SARI_02446"
+ CDS complement(2368182..2368826)
+ /gene="adk"
+ /locus_tag="SARI_02446"
+ /inference="protein motif:BlastProDom:IPR011769"
+ /inference="protein motif:FPrintScan:IPR000850"
+ /inference="protein motif:HMMPfam:IPR000850"
+ /inference="protein motif:HMMPfam:IPR007862"
+ /inference="protein motif:HMMTigr:IPR006259"
+ /inference="protein motif:ScanRegExp:IPR000850"
+ /inference="protein motif:ScanRegExp:IPR001585"
+ /inference="similar to AA sequence:INSD:AAN79072.1"
+ /note="essential enzyme that recycles AMP in active cells;
+ converts ATP and AMP to two molecules of ADP"
+ /codon_start=1
+ /transl_table=11
+ /product="adenylate kinase"
+ /protein_id="YP_001571449.2"
+ /db_xref="GI:228879510"
+ /db_xref="InterPro:IPR000850"
+ /db_xref="InterPro:IPR001585"
+ /db_xref="InterPro:IPR006259"
+ /db_xref="InterPro:IPR007862"
+ /db_xref="InterPro:IPR011769"
+ /translation="MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSE
+ LGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKDAGIV
+ VDYVLEFDVPDELIVDRIVGRRVHAASGRVYHVKFNPPKVEGKDDVTGEDLTTRKDDQ
+ EETVRKRLVEYHQMTAPLIGYYQKEAEAGNTKYAKVDGTQAVADVRADLEKILG"
+ misc_feature complement(2368185..2368826)
+ /gene="adk"
+ /locus_tag="SARI_02446"
+ /note="adenylate kinase; Reviewed; Region: adk; PRK00279"
+ /db_xref="CDD:234711"
+ misc_feature complement(2368212..2368823)
+ /gene="adk"
+ /locus_tag="SARI_02446"
+ /note="Adenylate kinase (ADK) catalyzes the reversible
+ phosphoryl transfer from adenosine triphosphates (ATP) to
+ adenosine monophosphates (AMP) and to yield adenosine
+ diphosphates (ADP). This enzyme is required for the
+ biosynthesis of ADP and is essential for...; Region: ADK;
+ cd01428"
+ /db_xref="CDD:238713"
+ misc_feature complement(order(2368551..2368553,2368563..2368568,
+ 2368572..2368577,2368650..2368652,2368719..2368721,
+ 2368734..2368736))
+ /gene="adk"
+ /locus_tag="SARI_02446"
+ /note="AMP-binding site [chemical binding]; other site"
+ /db_xref="CDD:238713"
+ misc_feature complement(order(2368314..2368316,2368326..2368328,
+ 2368458..2368460,2368563..2368565,2368575..2368577,
+ 2368719..2368721))
+ /gene="adk"
+ /locus_tag="SARI_02446"
+ /note="ATP-AMP (Ap5A)-binding site [chemical binding];
+ other site"
+ /db_xref="CDD:238713"
+ gene complement(2369063..2370937)
+ /locus_tag="SARI_02447"
+ CDS complement(2369063..2370937)
+ /locus_tag="SARI_02447"
+ /inference="protein motif:Gene3D:IPR003594"
+ /inference="protein motif:HMMPanther:IPR001404"
+ /inference="protein motif:HMMPfam:IPR001404"
+ /inference="protein motif:HMMPfam:IPR003594"
+ /inference="protein motif:HMMSmart:IPR003594"
+ /inference="protein motif:ScanRegExp:IPR001404"
+ /inference="protein motif:superfamily:IPR003594"
+ /inference="protein motif:superfamily:IPR009079"
+ /note="molecular chaperone"
+ /codon_start=1
+ /transl_table=11
+ /product="heat shock protein 90"
+ /protein_id="YP_001571450.2"
+ /db_xref="GI:448236258"
+ /db_xref="InterPro:IPR001404"
+ /db_xref="InterPro:IPR003594"
+ /db_xref="InterPro:IPR009079"
+ /translation="MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAAD
+ KLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTIADNGVGMNRDEVIDHLGTIAKSGT
+ KSFLESMGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGDKPENGVFWESAGEG
+ EYTVADITKNDRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEIEKREEKDG
+ ETVISWEKINKAQALWTRNKSEIKDDEYNEFYKHIAHDFTDPLTWSHNRVEGKQEYTS
+ LLYIPSQAPWDLWNRDHKHGLKLYVQRVFIMDDAEQFMPNYLRFVRGLIDSNDLPLNV
+ SREILQDSTVTRNLRSALTKRVLQMLEKLAKDDAEKYQTFWKQFGLVLKEGPAEDHAN
+ QEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKNSPHLELL
+ RKKGIEVLLLSDRIDEWMMNYLTEFDGKAFQSVAKADESIEKLADEVDENAKEAEKAL
+ EPFVERVKTLLGDRVKEVRLTHRLTDTPAIVTTDADEMSTQMAKLFAAAGQSVPEVKY
+ IFELNPDHVLVKRTADTQDEAQFKEWVELLLDQALFAERGTLEDPNQFIRRMNQLLVS
+ "
+ misc_feature complement(2369069..2370928)
+ /locus_tag="SARI_02447"
+ /note="heat shock protein 90; Provisional; Region:
+ PRK05218"
+ /db_xref="CDD:235366"
+ misc_feature complement(2370503..2370853)
+ /locus_tag="SARI_02447"
+ /note="Histidine kinase-like ATPases; This family includes
+ several ATP-binding proteins for example: histidine
+ kinase, DNA gyrase B, topoisomerases, heat shock protein
+ HSP90, phytochrome-like ATPases and DNA mismatch repair
+ proteins; Region: HATPase_c; cd00075"
+ /db_xref="CDD:238030"
+ misc_feature complement(order(2370515..2370517,2370521..2370523,
+ 2370557..2370568,2370683..2370688,2370692..2370694,
+ 2370698..2370700,2370704..2370706,2370815..2370817,
+ 2370824..2370826,2370836..2370838))
+ /locus_tag="SARI_02447"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature complement(2370824..2370826)
+ /locus_tag="SARI_02447"
+ /note="Mg2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature complement(order(2370560..2370562,2370566..2370568,
+ 2370686..2370688,2370692..2370694))
+ /locus_tag="SARI_02447"
+ /note="G-X-G motif; other site"
+ /db_xref="CDD:238030"
+ gene complement(2371048..2371653)
+ /gene="recR"
+ /locus_tag="SARI_02448"
+ CDS complement(2371048..2371653)
+ /gene="recR"
+ /locus_tag="SARI_02448"
+ /inference="protein motif:HMMPfam:IPR000093"
+ /inference="protein motif:HMMPfam:IPR006171"
+ /inference="protein motif:HMMSmart:IPR006154"
+ /inference="protein motif:HMMTigr:IPR000093"
+ /inference="protein motif:ScanRegExp:IPR000093"
+ /inference="similar to AA sequence:INSD:CAD04971.1"
+ /note="'involved in a recombinational process of DNA
+ repair, independent of the recBC complex'"
+ /codon_start=1
+ /transl_table=11
+ /product="recombination protein RecR"
+ /protein_id="YP_001571451.1"
+ /db_xref="GI:161504339"
+ /db_xref="InterPro:IPR000093"
+ /db_xref="InterPro:IPR006154"
+ /db_xref="InterPro:IPR006171"
+ /translation="MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLA
+ QALTRAMAEIGHCADCRTFTEQEVCNICANPRRQENGQICVVESPADIYAIEQTGQFS
+ GRYFVLMGHLSPLDGIGPDDIGLDRLEQRLVSEKISELILATNPTVEGEATANYIAEL
+ CAQYGVEASRIAHGVPVGGELEMVDGTTLSHSLAGRHKIIL"
+ misc_feature complement(2371057..2371650)
+ /gene="recR"
+ /locus_tag="SARI_02448"
+ /note="recombination protein RecR; Reviewed; Region: recR;
+ PRK00076"
+ /db_xref="CDD:234616"
+ misc_feature complement(2371423..2371542)
+ /gene="recR"
+ /locus_tag="SARI_02448"
+ /note="RecR protein; Region: RecR; pfam02132"
+ /db_xref="CDD:202123"
+ misc_feature complement(2371078..2371413)
+ /gene="recR"
+ /locus_tag="SARI_02448"
+ /note="TOPRIM_recR: topoisomerase-primase (TOPRIM)
+ nucleotidyl transferase/hydrolase domain of the type found
+ in Escherichia coli RecR. RecR participates in the RecFOR
+ pathway of homologous recombinational repair in
+ prokaryotes. This pathway provides a...; Region:
+ TOPRIM_recR; cd01025"
+ /db_xref="CDD:173775"
+ misc_feature complement(order(2371207..2371209,2371213..2371215,
+ 2371219..2371221,2371381..2371383,2371390..2371395))
+ /gene="recR"
+ /locus_tag="SARI_02448"
+ /note="putative active site [active]"
+ /db_xref="CDD:173775"
+ misc_feature complement(order(2371219..2371221,2371393..2371395))
+ /gene="recR"
+ /locus_tag="SARI_02448"
+ /note="putative metal-binding site [ion binding]; other
+ site"
+ /db_xref="CDD:173775"
+ misc_feature complement(order(2371078..2371086,2371090..2371092,
+ 2371096..2371098,2371111..2371113,2371117..2371152,
+ 2371180..2371182,2371216..2371218,2371225..2371227,
+ 2371231..2371233,2371237..2371239,2371360..2371365,
+ 2371369..2371377))
+ /gene="recR"
+ /locus_tag="SARI_02448"
+ /note="tetramer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:173775"
+ gene complement(2371653..2371982)
+ /locus_tag="SARI_02449"
+ CDS complement(2371653..2371982)
+ /locus_tag="SARI_02449"
+ /inference="protein motif:HMMPfam:IPR004401"
+ /inference="protein motif:HMMTigr:IPR004401"
+ /inference="similar to AA sequence:INSD:BAE76250.1"
+ /note="'COG: COG0718 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571452.1"
+ /db_xref="GI:161504340"
+ /db_xref="InterPro:IPR004401"
+ /translation="MFGKGGLGNLMKQAQQMQEKMQKMQEEIAQLEVTGESGAGLVKV
+ TINGAHNCRRVEIDPSLLEDDKEMLEDLVAAAFNDAARRIEETQKEKMASVSSGMQLP
+ PGFKMPF"
+ misc_feature complement(2371668..2371976)
+ /locus_tag="SARI_02449"
+ /note="hypothetical protein; Validated; Region: PRK00153"
+ /db_xref="CDD:234669"
+ misc_feature complement(2372631..2372695)
+ /inference="nucleotide motif:Rfam:RF00382"
+ /note="Dnax ribosomal frameshifting element"
+ gene complement(2374065..2374616)
+ /locus_tag="SARI_02450"
+ CDS complement(2374065..2374616)
+ /locus_tag="SARI_02450"
+ /inference="protein motif:HMMPfam:IPR000836"
+ /inference="protein motif:HMMTigr:IPR005764"
+ /inference="protein motif:ScanRegExp:IPR002375"
+ /inference="similar to AA sequence:REFSEQ:NP_459478.1"
+ /note="catalyzes a salvage reaction resulting in the
+ formation of AMP which is metabolically less costly than a
+ de novo synthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="adenine phosphoribosyltransferase"
+ /protein_id="YP_001571453.1"
+ /db_xref="GI:161504341"
+ /db_xref="InterPro:IPR000836"
+ /db_xref="InterPro:IPR002375"
+ /db_xref="InterPro:IPR005764"
+ /translation="MTATAQQLEFLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYTLS
+ IELLVERYKKAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAETYEL
+ EYGTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFD
+ LGGEQRLEKQGITCYSLVPFPGH"
+ misc_feature complement(2374086..2374484)
+ /locus_tag="SARI_02450"
+ /note="Phosphoribosyl transferase (PRT)-type I domain;
+ Region: PRTases_typeI; cd06223"
+ /db_xref="CDD:206754"
+ misc_feature complement(order(2374143..2374145,2374215..2374229,
+ 2374233..2374241,2374419..2374421,2374425..2374427))
+ /locus_tag="SARI_02450"
+ /note="active site"
+ /db_xref="CDD:206754"
+ gene complement(2374769..2375146)
+ /locus_tag="SARI_02451"
+ CDS complement(2374769..2375146)
+ /locus_tag="SARI_02451"
+ /inference="protein motif:HMMPfam:IPR007401"
+ /inference="similar to AA sequence:INSD:AAV78126.1"
+ /note="'COG: COG2832 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571454.1"
+ /db_xref="GI:161504342"
+ /db_xref="InterPro:IPR007401"
+ /translation="MQRTILIIIGWLAVVLGTLGVVLPLLPTTPFILLAAWCFARSSP
+ RFHVWLLYRSWFGGYLRHWQRYRAMPPGAKPRAIALILLTFGISLWLVNMMWVRVLLL
+ VILTCLLIFMWRIPVIDEKQQKR"
+ misc_feature complement(2374772..2375146)
+ /locus_tag="SARI_02451"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10527"
+ /db_xref="CDD:182520"
+ gene 2375227..2375742
+ /locus_tag="SARI_02452"
+ CDS 2375227..2375742
+ /locus_tag="SARI_02452"
+ /inference="protein motif:HMMPfam:IPR010890"
+ /inference="similar to AA sequence:REFSEQ:YP_151439.1"
+ /note="'PriC; protein involved in DNA replication; part of
+ the primosome, a protein complex required to restart
+ stalled replication forks; binds the complex formed by
+ PriA, PriB and DNA; PriC-dependent primosome requires a
+ gap to restart DNA replication; stimulates Rep activity at
+ stalled forks'"
+ /codon_start=1
+ /transl_table=11
+ /product="primosomal replication protein N''"
+ /protein_id="YP_001571455.1"
+ /db_xref="GI:161504343"
+ /db_xref="InterPro:IPR010890"
+ /translation="MLLQTLEERLATLRQRCAPLAQHATLSARFDRHLFRTRSTLLLG
+ YLEEADANLAALRQAVKHEQLPQVAWLAEHLASQLEAISRETAAWSLRQWDAAAPGLG
+ RWQRRRIQHQEFERRLLAMTQERKVRLAQATRLVEQQTLQKEVEIYEGRLARCRHALE
+ KIENVLARLTR"
+ misc_feature 2375227..2375739
+ /locus_tag="SARI_02452"
+ /note="primosomal replication protein N'';
+ Provisional; Region: PRK10093"
+ /db_xref="CDD:182236"
+ gene 2375756..2375923
+ /locus_tag="SARI_02453"
+ CDS 2375756..2375923
+ /locus_tag="SARI_02453"
+ /inference="similar to AA sequence:REFSEQ:NP_455077.1"
+ /note="'COG: NOG18531 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571456.1"
+ /db_xref="GI:161504344"
+ /translation="MSLENAPDEVKLAVDLIVLLEENRLPARTVLRALEIVMRDYENK
+ LKSTEDGSQTE"
+ misc_feature 2375756..2375896
+ /locus_tag="SARI_02453"
+ /note="hypothetical protein; Provisional; Region:
+ PRK11038"
+ /db_xref="CDD:182920"
+ unsure 2375830..2375851
+ /locus_tag="SARI_02453"
+ /note="Sequence derived from one plasmid subclone"
+ gene 2375993..2376987
+ /locus_tag="SARI_02454"
+ /note="Pseudogene compared to gi|16763859|ref|NP_459474.1|
+ putative transposase [Salmonella typhimurium LT2]"
+ gene complement(2377083..2380445)
+ /locus_tag="SARI_02455"
+ CDS complement(2377083..2380445)
+ /locus_tag="SARI_02455"
+ /inference="protein motif:HMMPfam:IPR006685"
+ /inference="protein motif:ScanRegExp:IPR006686"
+ /inference="protein motif:superfamily:IPR009053"
+ /inference="protein motif:superfamily:IPR010920"
+ /inference="protein motif:superfamily:IPR011014"
+ /inference="protein motif:superfamily:IPR011066"
+ /note="small mechanosensitive ion channel (MscS) that
+ opens in response to stretch forces in the membrane lipid
+ bilayer; maintains cell turgor through accumulation and
+ release of potassium; large protein class of MscS"
+ /codon_start=1
+ /transl_table=11
+ /product="potassium efflux protein KefA"
+ /protein_id="YP_001571457.1"
+ /db_xref="GI:161504345"
+ /db_xref="InterPro:IPR006685"
+ /db_xref="InterPro:IPR006686"
+ /db_xref="InterPro:IPR009053"
+ /db_xref="InterPro:IPR010920"
+ /db_xref="InterPro:IPR011014"
+ /db_xref="InterPro:IPR011066"
+ /translation="MTMLQLYNRLQHLVFITISFLIILLSCQSLAFARGQTNGDLPSK
+ ADVQNQLDTLNKQKDLSAQDKLVQQDLIDTLATLEKIERVKDETVQLRQKVAQAPEKM
+ RQATDALNALSDVNSDDEMRKTLSTLSLRQLELRVAQVLDDLQNSQNDLAAYNSQLVS
+ LQTQPERVQNAMYTASQQIQQIRNRLDGNNVGEAALRPSQQVLLQAQQALLNAQIDQQ
+ RKSLEGNTVLQDTLQKQRDYVTANSNRLEHQLQLLQEAVNSKRLTLTEKTAQEAISPD
+ ETARIQANPLVKQELDINHQLSQRLIVATKNGNMLMQKNIKVKNWLDRALQSERNIKE
+ QIAVLKGSLLLSRILYQQQQTLPSADELEDMTNRIADLRLEQFEINQQRDALFQSNAF
+ VDKLEEGHTSEVNDEVHDALLQVVEMRRELLDQLNKQLGNQLMMAINLQINQQQLMSV
+ SKNLKSILTQQIFWVNSNRPMGWDWLKAFPQTLKEQFSAMKITVNWQKAWPAVFIAFL
+ AGLPLLLIAGLIRWRLKWLKAYQQKLAAAVGSLRNDSQLNTPKAILIDLIRALPVCLI
+ ILALGLILLTMQLNISDLLWAFSKKLAMFWLVFGLCWKVLEKEGVAIRHFGMPAQLTS
+ HWRRQIVRISLALLPLHFWSVVAELSPLNLMDDVLGQAVIFLNLLVITLLVWPLCRES
+ WRDKESHGIRLVTVTILSIIPVALMVLTATGYFYTTLRLAGRWIETVYLVIIWNLLYQ
+ TVLRGLSVAARRIAWRRALARRQNLVKEGAEGAEPQEEPAIALEQINQQTLRITMLLM
+ IALFGVMFWAIWSDLITVFSYLDSITLWHYNGSEAGAAVVKIVTMGSLLFAIIAAMVA
+ WALIRNLPGLLEVLVLSRLNMRQGASYAITTILNYVIIAAGAMTVFGSLGVSWDKLQW
+ LAAALSVGLGFGLQEIFGNFVSGLIILFERPVRIGDTVTIGTYSGTVSKIRIRATTIT
+ DFDRKEVIIPNKAFVTERLINWSLSDTTTRLVIRLGVAYGSDLEKVKKVLLQAAMEHP
+ KVMHDPEPAVFFTTFGASTLDHELRLYVRELRDRSHTVDELNRAIDRLCRENDINIAF
+ NQLEVHLHNAKGDEVTEVKRDLNGGDLAPAAS"
+ misc_feature complement(2377086..2380367)
+ /locus_tag="SARI_02455"
+ /note="hypothetical protein; Provisional; Region:
+ PRK11281"
+ /db_xref="CDD:236892"
+ misc_feature complement(2377968..2378882)
+ /locus_tag="SARI_02455"
+ /note="Mechanosensitive ion channel inner membrane domain
+ 1; Region: MscS_TM; pfam12794"
+ /db_xref="CDD:221775"
+ misc_feature complement(2377188..2377784)
+ /locus_tag="SARI_02455"
+ /note="Mechanosensitive ion channel; Region: MS_channel;
+ pfam00924"
+ /db_xref="CDD:201506"
+ gene 2380455..2380580
+ /locus_tag="SARI_02456"
+ CDS 2380455..2380580
+ /locus_tag="SARI_02456"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571458.1"
+ /db_xref="GI:161504346"
+ /translation="MSEPASRAEIIKPQEYHACNKQNSETENVQEFSWNSIRGRR"
+ gene complement(2380564..2381217)
+ /locus_tag="SARI_02457"
+ CDS complement(2380564..2381217)
+ /locus_tag="SARI_02457"
+ /inference="protein motif:FPrintScan:IPR001647"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR001647"
+ /inference="protein motif:HMMPfam:IPR013572"
+ /inference="protein motif:ScanRegExp:IPR001647"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:INSD:AAV78131.1"
+ /note="regulates the acrAB operon which is involved in
+ susceptibility to dephalothin and cephaloridine"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional repressor AcrR"
+ /protein_id="YP_001571459.1"
+ /db_xref="GI:161504347"
+ /db_xref="InterPro:IPR001647"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /db_xref="InterPro:IPR013572"
+ /translation="MARKTKEQALETRQHILDVALRLFSQQGVSATSLAEIANAAGVT
+ RGAIYWHFKNKSDLFSEIWELSESNIGELEIEYQAKFPDDPLSVLREILVHVLEATVI
+ EERRRLLMEIIFHKCEFVGEMVVVQQAQRSLCLESYERIEQTLTHCINAKMLPENLLT
+ RRAAILMRSFISGIMENWLFAPQSFDLKKEARAYVTILLEMYQLCPTLRASTVNDAP"
+ misc_feature complement(2380585..2381217)
+ /locus_tag="SARI_02457"
+ /note="DNA-binding transcriptional repressor AcrR;
+ Provisional; Region: PRK10668"
+ /db_xref="CDD:182632"
+ misc_feature complement(2381032..2381172)
+ /locus_tag="SARI_02457"
+ /note="Bacterial regulatory proteins, tetR family; Region:
+ TetR_N; pfam00440"
+ /db_xref="CDD:201228"
+ misc_feature complement(2380612..2380968)
+ /locus_tag="SARI_02457"
+ /note="MAATS-type transcriptional repressor, C-terminal
+ region; Region: TetR_C_2; pfam08361"
+ /db_xref="CDD:116942"
+ gene 2381359..2382552
+ /locus_tag="SARI_02458"
+ CDS 2381359..2382552
+ /locus_tag="SARI_02458"
+ /inference="protein motif:HMMPfam:IPR006143"
+ /inference="protein motif:HMMTigr:IPR006143"
+ /inference="similar to AA sequence:INSD:AAL19430.1"
+ /note="'KEGG: saz:Sama_0326 0.0047
+ phosphopantothenoylcysteine decarboxylase,
+ phosphopantothenate--cysteine ligase K01598:K01922;
+ COG: COG0845 Membrane-fusion protein;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571460.1"
+ /db_xref="GI:161504348"
+ /db_xref="InterPro:IPR006143"
+ /translation="MNKNRGLTPLAVVLMLSGSLALTGCDDKQDQQGGQQMPEVGVVT
+ LKTEPLQITTELPGRTVAYRIAEVRPQVSGIILKRNFVEGSDIEAGVSLYQIDPATYQ
+ ATYDSAKGDLAKAQAAANIAELTVKRYQKLLGTQYISKQEYDQALADAQQANAAVVAA
+ KAAVETARINLAYTKVTSPISGRIGKSSVTEGALVQNGQASALATVQQLDPIYVDVTQ
+ SSNDFLRLKQELANGSLKQENGKAKVDLVTSDGIKFPQSGTLEFSDVTVDQTTGSITL
+ RAIFPNPDHTLLPGMFVRARLQEGTKPAALLVPQQGVTRTPRGDATVLVVGADNKVEI
+ RQIVASQAIGDKWLVTDGLKAGDRVVVSGLQKVRPGAQVKVQEITADNKQQAASGDQP
+ AQPRS"
+ misc_feature 2381359..2382549
+ /locus_tag="SARI_02458"
+ /note="multidrug efflux system transporter AcrA;
+ Provisional; Region: PRK15030"
+ /db_xref="CDD:184990"
+ misc_feature 2381881..2382228
+ /locus_tag="SARI_02458"
+ /note="HlyD family secretion protein; Region: HlyD_3;
+ pfam13437"
+ /db_xref="CDD:222128"
+ misc_feature <2382142..2382339
+ /locus_tag="SARI_02458"
+ /note="Animal heme peroxidases and related proteins;
+ Region: An_peroxidase_like; cl14561"
+ /db_xref="CDD:246664"
+ misc_feature order(2382283..2382285,2382295..2382297,2382307..2382312,
+ 2382319..2382324,2382331..2382333)
+ /locus_tag="SARI_02458"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:188647"
+ gene 2382575..2385724
+ /locus_tag="SARI_02459"
+ CDS 2382575..2385724
+ /locus_tag="SARI_02459"
+ /inference="protein motif:FPrintScan:IPR001036"
+ /inference="protein motif:HMMPfam:IPR001036"
+ /inference="protein motif:HMMTigr:IPR004764"
+ /note="'KEGG: eci:UTI89_C2351 2.1e-108 yegO; hypothetical
+ protein YegO K07789;
+ COG: COG0841 Cation/multidrug efflux pump;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571461.1"
+ /db_xref="GI:161504349"
+ /db_xref="InterPro:IPR001036"
+ /db_xref="InterPro:IPR004764"
+ /translation="MPNFFIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVT
+ ISATYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTDADI
+ AQVQVQNKLQLAMPLLPQEVQQQGVSVEKSSSSFLMVVGVINTNGTMTQEDISDYVAA
+ NMKDPISRTSGVGDVQLFGSQYAMRIWMNPTELTKYQLTPIDVINAIKAQNAQVAAGQ
+ LGGTPPVKGQQLNASIIAQTRLTSTDEFGKILLKVNQDGSQVRLRDVAKIELGGENYD
+ VIAQFNGQPASGLGIKLATGANALDTAAAIRAELKKMEPFFPPGMKIVYPYDTTPFVK
+ ISIHEVVKTLVEAIILVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAVLAAFGFSINT
+ LTMFGMVLAIGLLVDDAIVVVENVERVMTEEGLPPKEATRKSMGQIQGALVGIAMVLS
+ AVFIPMAFFGGSTGAIYRQFSITIVSAMALSVLVALILTPALCATMLKPVAKGDHGEE
+ KKGFFGWFNRMFDKSTHHYTDSVGNILRSTGRYLLLYLIIVVGMAYLFVRLPSSFLPD
+ EDQGVFLTMVQLPAGATQERTQKVLDEVTDYYLNKEKANVESVFAVNGFGFAGRGQNT
+ GIAFVSLKDWADRPGDENKVEAITQRATAAFSQIKDAMVFAFNLPAIVELGTATGFDF
+ ELIDQAGLGHEKLTQARNQLFGEVAKYPDLLVGVRPNGLEDTPQFKIDIDQEKAQALG
+ VSISDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAKYRMLPDDINDWYVRGRDGQM
+ VPFSAFSSSRWEYGSPRLERYNGLPSMEILGQAAPGKSTGEAMAMMEELASKLPAGIG
+ YDWTGMSYQERLSGNQAPALYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALL
+ AATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLVEATLEAVRMRL
+ RPILMTSLAFMLGVMPLVISSGAGSGAQNAVGTGVLGGMVTATVLAIFFVPVFFVVVR
+ RRFSRKSEDIEHSHSTQHH"
+ misc_feature 2382575..2385721
+ /locus_tag="SARI_02459"
+ /note="multidrug efflux system protein AcrB; Provisional;
+ Region: PRK15127"
+ /db_xref="CDD:185081"
+ misc_feature <2383580..2384032
+ /locus_tag="SARI_02459"
+ /note="Protein export membrane protein; Region: SecD_SecF;
+ cl14618"
+ /db_xref="CDD:246677"
+ misc_feature <2385206..2385616
+ /locus_tag="SARI_02459"
+ /note="Protein export membrane protein; Region: SecD_SecF;
+ cl14618"
+ /db_xref="CDD:246677"
+ gene 2386223..2386597
+ /locus_tag="SARI_02460"
+ CDS 2386223..2386597
+ /locus_tag="SARI_02460"
+ /inference="similar to AA sequence:INSD:AAL19428.1"
+ /note="'COG: NOG09846 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571462.1"
+ /db_xref="GI:161504350"
+ /translation="MDEYSPKRHDIAQLKFLCETLYHDCLANLEESNHGLVNDPTSAV
+ NLQLNELIEHIATFALNYKIKYNEDNKLIAQIDEYLDDTFMLFSSYGINTQDLQKWRQ
+ SGNRLFRCFVNATRANPVSLSC"
+ misc_feature 2386223..2386588
+ /locus_tag="SARI_02460"
+ /note="Hha toxicity attenuator; Provisional; Region:
+ PRK10667"
+ /db_xref="CDD:182631"
+ gene 2386625..2386843
+ /locus_tag="SARI_02461"
+ CDS 2386625..2386843
+ /locus_tag="SARI_02461"
+ /inference="protein motif:HMMPfam:IPR007985"
+ /inference="similar to AA sequence:INSD:AAV78135.1"
+ /note="with Hns involved in transcriptional regulation of
+ hemolysin; non-specific DNA-binding protein which affects
+ the production of multiple proteins"
+ /codon_start=1
+ /transl_table=11
+ /product="hemolysin expression-modulating protein"
+ /protein_id="YP_001571463.1"
+ /db_xref="GI:161504351"
+ /db_xref="InterPro:IPR007985"
+ /translation="MSDKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFY
+ SAADHRLAELTMNKLYDKIPSSVWKFIR"
+ misc_feature 2386625..2386840
+ /locus_tag="SARI_02461"
+ /note="gene expression modulator; Provisional; Region:
+ PRK10945"
+ /db_xref="CDD:182856"
+ gene 2387022..2387573
+ /locus_tag="SARI_02462"
+ CDS 2387022..2387573
+ /locus_tag="SARI_02462"
+ /inference="protein motif:ScanRegExp:IPR001451"
+ /inference="protein motif:superfamily:IPR011004"
+ /inference="similar to AA sequence:INSD:AAL19426.1"
+ /note="'KEGG: stm:STM0472 2.9e-93 maa; maltose
+ o-acetyltransferase K00661;
+ COG: COG0110 Acetyltransferase (isoleucine patch
+ superfamily);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="maltose O-acetyltransferase"
+ /protein_id="YP_001571464.1"
+ /db_xref="GI:161504352"
+ /db_xref="InterPro:IPR001451"
+ /db_xref="InterPro:IPR011004"
+ /translation="MSDEKQKMIVGALYCPTDETLCQDRLRARQLIHKYNHTTPDEIN
+ KRQAILRDLLGRSEDAYIEPSFRCDYGYNIFLGHSFYANFDCVMLDVCPINIGDNCML
+ APGVHIYTATHPLDAVERNSGRELGKPVTIGNNVWIGGRAVINPGVTIGDNAVVASGA
+ VVIKNVPPNVVVGGNPAQPIKKL"
+ misc_feature 2387022..2387570
+ /locus_tag="SARI_02462"
+ /note="maltose O-acetyltransferase; Provisional; Region:
+ PRK10092"
+ /db_xref="CDD:182235"
+ misc_feature 2387058..2387561
+ /locus_tag="SARI_02462"
+ /note="Maltose O-acetyltransferase (MAT) and Galactoside
+ O-acetyltransferase (GAT): MAT and GAT catalyze the
+ CoA-dependent acetylation of the 6-hydroxyl group of their
+ respective sugar substrates. MAT acetylates maltose and
+ glucose exclusively at the C6...; Region: LbH_MAT_GAT;
+ cd03357"
+ /db_xref="CDD:100047"
+ misc_feature order(2387067..2387069,2387094..2387096,2387226..2387228,
+ 2387262..2387264,2387268..2387270,2387286..2387288,
+ 2387292..2387294,2387322..2387324,2387328..2387330,
+ 2387346..2387348,2387352..2387354,2387358..2387360,
+ 2387364..2387366,2387385..2387390,2387394..2387396,
+ 2387430..2387432,2387436..2387441,2387454..2387456,
+ 2387490..2387495,2387502..2387504,2387508..2387513,
+ 2387538..2387549,2387553..2387555)
+ /locus_tag="SARI_02462"
+ /note="active site"
+ /db_xref="CDD:100047"
+ misc_feature order(2387067..2387069,2387094..2387096,2387226..2387228,
+ 2387262..2387264,2387268..2387270,2387286..2387288,
+ 2387292..2387294,2387322..2387324,2387352..2387354,
+ 2387358..2387360,2387385..2387390,2387394..2387396)
+ /locus_tag="SARI_02462"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:100047"
+ misc_feature order(2387097..2387099,2387106..2387108,2387118..2387120,
+ 2387139..2387141,2387214..2387216,2387220..2387225,
+ 2387271..2387276,2387316..2387318,2387322..2387324,
+ 2387334..2387336,2387340..2387342,2387346..2387348,
+ 2387358..2387360,2387364..2387372,2387376..2387381,
+ 2387397..2387399,2387403..2387405,2387424..2387426,
+ 2387430..2387432,2387439..2387447,2387454..2387456,
+ 2387478..2387480,2387484..2387486,2387493..2387498,
+ 2387508..2387510,2387544..2387546)
+ /locus_tag="SARI_02462"
+ /note="trimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:100047"
+ misc_feature order(2387346..2387348,2387352..2387354,2387358..2387360,
+ 2387364..2387366,2387430..2387432,2387436..2387441,
+ 2387454..2387456,2387490..2387495,2387508..2387513,
+ 2387538..2387543,2387547..2387549)
+ /locus_tag="SARI_02462"
+ /note="CoA binding site [chemical binding]; other site"
+ /db_xref="CDD:100047"
+ gene 2387691..2388161
+ /locus_tag="SARI_02463"
+ CDS 2387691..2388161
+ /locus_tag="SARI_02463"
+ /inference="similar to AA sequence:INSD:AAX64419.1"
+ /note="'COG: NOG07873 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571465.1"
+ /db_xref="GI:161504353"
+ /translation="MTEIQRLLSETIDDLNVREKRDNRPRLSISFIRKHPGLFIAMYA
+ AWFATLAVMLQSETLVGSVWLLVVLFIVFNGFFFFDIAPRYHYDDIDVLDLRVCYNGE
+ WYNTRFVPPALIETILRSPQVDNEHKVQLQKMVARKGELSFYDIFTLARAEASR"
+ misc_feature 2387691..2388155
+ /locus_tag="SARI_02463"
+ /note="sigma70 family sigma factor YlaC; Region: YlaC;
+ pfam10777"
+ /db_xref="CDD:119297"
+ unsure 2387699..2387705
+ /locus_tag="SARI_02463"
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(2388363..2388623)
+ /gene="rpmE2"
+ /locus_tag="SARI_02464"
+ CDS complement(2388363..2388623)
+ /gene="rpmE2"
+ /locus_tag="SARI_02464"
+ /inference="protein motif:HMMPfam:IPR002150"
+ /inference="protein motif:HMMTigr:IPR002150"
+ /inference="similar to AA sequence:INSD:"
+ /note="'RpmE2; there appears to be two types of ribosomal
+ proteins L31 in bacterial genomes; some contain a CxxC
+ motif while others do not; Bacillus subtilis has both
+ types; the proteins in this cluster do not have the CXXC
+ motif; RpmE is found in exponentially growing Bacilli
+ while YtiA was found after exponential growth; expression
+ of ytiA is controlled by a zinc-specific transcriptional
+ repressor; RpmE contains one zinc ion and a CxxC motif is
+ responsible for this binding; forms an RNP particle along
+ with proteins L5, L18, and L25 and 5S rRNA; found
+ crosslinked to L2 and L25 and EF-G; may be near the
+ peptidyltransferase site of the 50S ribosome'"
+ /codon_start=1
+ /transl_table=11
+ /product="50S ribosomal protein L31 type B"
+ /protein_id="YP_001571466.1"
+ /db_xref="GI:161504354"
+ /db_xref="InterPro:IPR002150"
+ /translation="MKPDIHPVYRTVVFHDTSANEYVKVGSTIKTKREIELDGVTYPY
+ VTIDVSSKSHPFYTGKQKTFDSESSAARFQKRFGHFIGAKRG"
+ misc_feature complement(2388366..2388623)
+ /gene="rpmE2"
+ /locus_tag="SARI_02464"
+ /note="50S ribosomal protein L31 type B; Reviewed; Region:
+ rpmE2; PRK01678"
+ /db_xref="CDD:234969"
+ gene 2388848..2390398
+ /locus_tag="SARI_02465"
+ CDS 2388848..2390398
+ /locus_tag="SARI_02465"
+ /inference="protein motif:HMMPfam:IPR001633"
+ /inference="protein motif:HMMSmart:IPR001633"
+ /inference="similar to AA sequence:INSD:AAL19422.1"
+ /note="'KEGG: mca:MCA1246 9.3e-33 methyltransferase CheR,
+ putative K03412:K00575;
+ COG: COG4943 Predicted signal transduction protein
+ containing sensor and EAL domains;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571467.1"
+ /db_xref="GI:161504355"
+ /db_xref="InterPro:IPR001633"
+ /translation="MTTRHLVSLVTGVLILSVLFPVGLSLWLAHRQAEKKFNEELNIF
+ SSRVALRTERVSDQAKAALTHIASFKGEPCSSAHLLAMRRVSYSFRYVQEVLYLKNSI
+ PVCSSLEKESHIPAFPPPMKITQDGYRAWFTAQNDLGIKRYMAALGSDNYIVMIDPAS
+ FIDVIPFGAWPIDVAIIGQEHNTVVASSGKPAPAILPLIQHETPLRLENRGIQYAIHP
+ FPEMDITIVSWASTAPLEKSWYRQAFIWLPAGIITGLLAAAFILRILRRLQSPRHRLQ
+ DAIDNREINVHYQPIVSLSSGKIVGAEALARWQQADGTFLSPEIFIALAEQTGLTEPL
+ TRLIIETVFEDMGSWLRAHPEQHISINLEASDLASETLPALLSTLLNRSQIPPSQIAL
+ ELTEREFADPKTSAPIVARYRNAGHSIYIDDFGTGYSSLSYLQNLDVDVLKIDKSFVD
+ ALEYKNVTPHIIEMAKTLKLKMVAEGIETTRQEQWLRQHGVHYGQGWLYSKPLPATAF
+ ILWAEQRL"
+ misc_feature 2388848..2390395
+ /locus_tag="SARI_02465"
+ /note="Predicted signal transduction protein containing
+ sensor and EAL domains [Signal transduction mechanisms];
+ Region: COG4943"
+ /db_xref="CDD:227279"
+ misc_feature 2388953..2389588
+ /locus_tag="SARI_02465"
+ /note="CSS motif domain associated with EAL; Region:
+ CSS-motif; pfam12792"
+ /db_xref="CDD:221774"
+ misc_feature 2389664..2390362
+ /locus_tag="SARI_02465"
+ /note="EAL domain. This domain is found in diverse
+ bacterial signaling proteins. It is called EAL after its
+ conserved residues and is also known as domain of unknown
+ function 2 (DUF2). The EAL domain has been shown to
+ stimulate degradation of a second...; Region: EAL;
+ cd01948"
+ /db_xref="CDD:238923"
+ unsure 2389524..2389818
+ /locus_tag="SARI_02465"
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(2390447..2390544)
+ /locus_tag="SARI_02466"
+ ncRNA complement(2390447..2390544)
+ /locus_tag="SARI_02466"
+ /ncRNA_class="SRP_RNA"
+ /product="bacterial signal recognition particle RNA"
+ /inference="nucleotide motif:Rfam:RF00169"
+ /note="Rfam score 62.94"
+ gene 2390707..2391018
+ /locus_tag="SARI_02467"
+ CDS 2390707..2391018
+ /locus_tag="SARI_02467"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR001497"
+ /inference="protein motif:HMMTigr:IPR001497"
+ /inference="similar to AA sequence:INSD:"
+ /note="'KEGG: eci:UTI89_C0482 3.3e-46 ybaZ; hypothetical
+ protein YbaZ K07443;
+ COG: COG3695 Predicted methylated DNA-protein cysteine
+ methyltransferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571468.1"
+ /db_xref="GI:161504356"
+ /db_xref="InterPro:IPR001497"
+ /db_xref="InterPro:IPR011991"
+ /translation="MDIQDTFPQRVWQIVASIPEGFVTTYGDVARLAGSPQAARQVGG
+ VLKRLPEGSTLPWHRVVNRHGAISLTGPDLQRQRQALLAEGVVVSGSGQIDLQRYRWV
+ Y"
+ misc_feature <2390707..2390964
+ /locus_tag="SARI_02467"
+ /note="Methylated DNA-protein cysteine methyltransferase
+ [DNA replication, recombination, and repair]; Region: Ada;
+ COG0350"
+ /db_xref="CDD:223427"
+ misc_feature 2390725..2390961
+ /locus_tag="SARI_02467"
+ /note="The DNA repair protein O6-alkylguanine-DNA
+ alkyltransferase (ATase; also known as AGT, AGAT and MGMT)
+ reverses O6-alkylation DNA damage by transferring O6-alkyl
+ adducts to an active site cysteine irreversibly, without
+ inducing DNA strand breaks. ATases...; Region: ATase;
+ cd06445"
+ /db_xref="CDD:119438"
+ misc_feature order(2390725..2390730,2390782..2390787,2390809..2390811,
+ 2390818..2390820,2390824..2390829,2390833..2390835,
+ 2390842..2390847,2390851..2390853,2390875..2390877,
+ 2390890..2390892,2390911..2390913)
+ /locus_tag="SARI_02467"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:119438"
+ misc_feature order(2390782..2390784,2390875..2390880,2390884..2390886,
+ 2390956..2390958)
+ /locus_tag="SARI_02467"
+ /note="active site"
+ /db_xref="CDD:119438"
+ gene complement(2391051..2391620)
+ /locus_tag="SARI_02468"
+ CDS complement(2391051..2391620)
+ /locus_tag="SARI_02468"
+ /inference="similar to AA sequence:INSD:AAX64414.1"
+ /note="'COG: COG3126 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571469.1"
+ /db_xref="GI:161504357"
+ /translation="MKLVHIVSGLAVAISLAACADKSADIQTPAPNPNMSITANQSTI
+ QQPNVSGTVWIRQKVALPPDAVLTVTLSDASLADTPSKVLSQKAVRTEGKQAPFSFVL
+ PFTPSDIQPNARILLSAAITVDNKLVFITESVKPVINNGGTKADLTLVPVQQTAVPVQ
+ ASGGATTTVPSTSPTQVNPSSAVPAPTQY"
+ misc_feature complement(2391174..2391620)
+ /locus_tag="SARI_02468"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG3126"
+ /db_xref="CDD:225668"
+ gene 2391835..2392695
+ /locus_tag="SARI_02469"
+ CDS 2391835..2392695
+ /locus_tag="SARI_02469"
+ /inference="protein motif:HMMPanther:IPR003703"
+ /inference="protein motif:HMMPfam:IPR003703"
+ /inference="protein motif:HMMPIR:IPR003703"
+ /inference="protein motif:HMMTigr:IPR003703"
+ /inference="similar to AA sequence:REFSEQ:YP_215494.1"
+ /note="'KEGG: sec:SC0507 3.5e-152 tesB; acyl-CoA
+ THIoesterase II K01076;
+ COG: COG1946 Acyl-CoA THIoesterase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="acyl-CoA thioesterase II"
+ /protein_id="YP_001571470.1"
+ /db_xref="GI:161504358"
+ /db_xref="InterPro:IPR003703"
+ /translation="MSQTLNNLLTLLNLEKIEEGLFRGQSEDLGLRQVFGGQVVGQAL
+ YAAKETVPEERLVHSFHSYFLRPGDSQKPIIYDVEVLRDGNSFSARRVAAIQNGKPIF
+ YMTASFQAPEPGFEHQKTMPTAVGPEGLPSETEIAQSLAHLLPPILKEKFLCDRPLEI
+ RPVEFHNPLKGHVAAPVRQVWIRANGTVPDDIRVHQYLLGYASDLNFLPVALQPHGIG
+ FLEKGIQIATIDHSMWFHRPFNLNEWLLYSVESTSASSARGFVRGEFYTQDGALVAST
+ VQEGVMRNHN"
+ misc_feature 2391835..2392692
+ /locus_tag="SARI_02469"
+ /note="acyl-CoA thioesterase II; Provisional; Region:
+ PRK10526"
+ /db_xref="CDD:182519"
+ misc_feature 2391895..2392161
+ /locus_tag="SARI_02469"
+ /note="Thioesterase II (TEII) is thought to regenerate
+ misprimed nonribosomal peptide synthetases (NRPSs) as well
+ as modular polyketide synthases (PKSs) by hydrolyzing
+ acetyl groups bound to the peptidyl carrier protein (PCP)
+ and acyl carrier protein (ACP)...; Region:
+ Thioesterase_II_repeat2; cd03445"
+ /db_xref="CDD:239529"
+ misc_feature order(2391952..2391954,2391961..2391966,2392003..2392005,
+ 2392012..2392014,2392150..2392152)
+ /locus_tag="SARI_02469"
+ /note="active site"
+ /db_xref="CDD:239529"
+ misc_feature 2392366..2392680
+ /locus_tag="SARI_02469"
+ /note="Thioesterase II (TEII) is thought to regenerate
+ misprimed nonribosomal peptide synthetases (NRPSs) as well
+ as modular polyketide synthases (PKSs) by hydrolyzing
+ acetyl groups bound to the peptidyl carrier protein (PCP)
+ and acyl carrier protein (ACP)...; Region:
+ Thioesterase_II_repeat1; cd03444"
+ /db_xref="CDD:239528"
+ misc_feature order(2392432..2392434,2392441..2392446,2392516..2392518,
+ 2392525..2392527,2392666..2392668)
+ /locus_tag="SARI_02469"
+ /note="catalytic triad [active]"
+ /db_xref="CDD:239528"
+ misc_feature order(2392519..2392536,2392540..2392542,2392591..2392593,
+ 2392618..2392620,2392663..2392665,2392675..2392677)
+ /locus_tag="SARI_02469"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:239528"
+ gene complement(2392747..2394033)
+ /locus_tag="SARI_02470"
+ CDS complement(2392747..2394033)
+ /locus_tag="SARI_02470"
+ /inference="protein motif:HMMPanther:IPR001905"
+ /inference="protein motif:HMMPfam:IPR010256"
+ /inference="protein motif:HMMTigr:IPR001905"
+ /inference="protein motif:ScanRegExp:IPR001905"
+ /inference="similar to AA sequence:INSD:CAD08923.1"
+ /note="'KEGG: ter:Tery_3993 1.1e-35 adenylate/guanylate
+ cyclase K01769;
+ COG: COG0004 Ammonia permease;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="ammonium transporter"
+ /protein_id="YP_001571471.1"
+ /db_xref="GI:161504359"
+ /db_xref="InterPro:IPR001905"
+ /db_xref="InterPro:IPR010256"
+ /translation="MKIAMIKTTLASLALLPGLTIAAPAVADKADNAFMMICAALVLF
+ MTIPGIALFYGGLIRAKNVLSMLTQVTVTFALVCILWVVYGYSLAFGEGNHFFGNIDG
+ AMLKNIALTAVMGTIYQYIHVAFQGTFACITVGLIVGALAERIRFSAVLIFVVVWFTL
+ SYIPISHMVWGGGLLAAHGALDFAGGTVVHINAAIAGLVGAYLIGKRVGFGKEAFKPH
+ NLPMVFIGTAILYIGWFGFNAGSAGSANEIAALAFVNTVVATAAAILGWIIGEWTLRG
+ KPSLLGACSGAIAGLVGVTPACGYVGVGGALVIGVIAGLAGLWGVTMLKRLLRVDDPC
+ DVFGVHGVCGIVGCILTGIFAASSLGGVGFADGVTMGHQVMIQLESIAITVVWSGVVA
+ FVGYKLADILVGLRVPEEQEREGLDVNSHGENAYNA"
+ misc_feature complement(2392750..2394033)
+ /locus_tag="SARI_02470"
+ /note="ammonium transporter; Provisional; Region:
+ PRK10666"
+ /db_xref="CDD:182630"
+ gene 2394052..2394429
+ /locus_tag="SARI_02471"
+ CDS 2394052..2394429
+ /locus_tag="SARI_02471"
+ /inference="similar to AA sequence:REFSEQ:NP_945155.1"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571472.1"
+ /db_xref="GI:161504360"
+ /translation="MCRVLQRRFVGFAGTNPDNAREFRDKNFAVANFSGIGRFIDDID
+ HLFQLVVGDSHINFDFRQEIHAVLRAAIKLGVSFLTTKSFHFGDGQPLNANGRKRFPH
+ VLQLERFDNYGNQLHKPPPLRIR"
+ gene complement(2394064..2394402)
+ /locus_tag="SARI_02472"
+ CDS complement(2394064..2394402)
+ /locus_tag="SARI_02472"
+ /inference="protein motif:BlastProDom:IPR002187"
+ /inference="protein motif:Gene3D:IPR002187"
+ /inference="protein motif:HMMPfam:IPR002187"
+ /inference="protein motif:ScanRegExp:IPR002187"
+ /inference="protein motif:ScanRegExp:IPR002332"
+ /inference="similar to AA sequence:INSD:AAL19417.1"
+ /note="'indirectly regulates nitrogen metabolism; at high
+ nitrogen levels P-II 2 prevents the phosphorylation of
+ NR-I, the transcriptional activator of the glutamine
+ synthetase gene (glnA); at low nitrogen levels P-II 2 is
+ uridylylated to form PII-UMP and interacts with an
+ adenylyltransferase (GlnE) that activates GlnA;
+ functionally it is equivalent to protein P-II (GlnB), but
+ itsexpression is driven by the presence of
+ uridylyltransferase, nitrogen regulator I, and the absence
+ of ammonia.'"
+ /codon_start=1
+ /transl_table=11
+ /product="nitrogen regulatory protein P-II 2"
+ /protein_id="YP_001571473.1"
+ /db_xref="GI:161504361"
+ /db_xref="InterPro:IPR002187"
+ /db_xref="InterPro:IPR002332"
+ /translation="MKLVTVVIKPFKLEDVREALSSIGIQGLTVTEVKGFGRQKGHAE
+ LYRGAEYSVNFLPKVKIDVAIADDQLEEVIDIINKAAYTGKVGDGKIFVAELTRVIRI
+ RTGEADEAAL"
+ misc_feature complement(2394067..2394402)
+ /locus_tag="SARI_02472"
+ /note="nitrogen regulatory protein P-II 2; Provisional;
+ Region: PRK10665"
+ /db_xref="CDD:182629"
+ misc_feature complement(2394088..2394393)
+ /locus_tag="SARI_02472"
+ /note="Nitrogen regulatory protein P-II; Region: P-II;
+ smart00938"
+ /db_xref="CDD:198006"
+ gene complement(2394613..2396394)
+ /locus_tag="SARI_02473"
+ CDS complement(2394613..2396394)
+ /locus_tag="SARI_02473"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR001140"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:REFSEQ:YP_151458.1"
+ /note="'KEGG: cch:Cag_0453 5.2e-71 ATPase K06147;
+ COG: COG1132 ABC-type multidrug transport system, ATPase
+ and permease components;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative multidrug transporter
+ membrane\ATP-binding components"
+ /protein_id="YP_001571474.1"
+ /db_xref="GI:161504362"
+ /db_xref="InterPro:IPR001140"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MRSFGQLWPTLKRLLAYGSPWRKTLSVAVIMLWIAAAAEVSGPL
+ LISYFIDNMVAQHLLPLGKVVGLAVAYVGLQFLAAGLHYAQSLLFNRAAVGVVQTLRT
+ NVMDAALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAM
+ FSLDWRMALVAILIFPAVLTVMIVYQRYSTPVVRRMRAYLADINDGFNEIINGMSVIQ
+ QFRQQARFGERMGEASRSHYLARMQTLRLDGFLLRPLLSLFSALILCGLLMLFSFTSV
+ GTIEVGVLYAFISYLSRLNEPLIELTTQQSMLQQAVVAGERVFELMDRPRQRYGSDDT
+ PLQSGAIDIDHLSFAYRDDNLVLQDITLSVPSRSFVALVGHTGSGKSTLASLLMGYYP
+ LMQGEIRLDGREISSLNHRVLRQGVAMVQQDPVVMADTFLANVTLGRDVSDTQVWQAL
+ ETVQLAELARSLSDGLYTRLGEQGNTLSVGQKQLLALARVLVDAPQILILDEATASID
+ SGTEQAIQQALAAIRERTTLVVIAHRLSTIVEADTILVLHRGQAVERGTHQQLLAAQG
+ RYWQMYQLQLVGEELAASVHEESGPAT"
+ misc_feature complement(2394619..2396394)
+ /locus_tag="SARI_02473"
+ /note="putative multidrug transporter membrane\ATP-binding
+ components; Provisional; Region: PRK10790"
+ /db_xref="CDD:182733"
+ misc_feature complement(2395501..2396322)
+ /locus_tag="SARI_02473"
+ /note="ABC transporter transmembrane region; Region:
+ ABC_membrane; pfam00664"
+ /db_xref="CDD:216049"
+ misc_feature complement(2394697..2395380)
+ /locus_tag="SARI_02473"
+ /note="ATP-binding cassette transporter nucleotide-binding
+ domain; Region: ABC_ATPase; cl17201"
+ /db_xref="CDD:247755"
+ misc_feature complement(2395252..2395275)
+ /locus_tag="SARI_02473"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(order(2394796..2394798,2394889..2394894,
+ 2395129..2395131,2395249..2395257,2395261..2395266))
+ /locus_tag="SARI_02473"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(2395129..2395140)
+ /locus_tag="SARI_02473"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(2394937..2394966)
+ /locus_tag="SARI_02473"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(2394889..2394906)
+ /locus_tag="SARI_02473"
+ /note="Walker B; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(2394871..2394882)
+ /locus_tag="SARI_02473"
+ /note="D-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(2394790..2394810)
+ /locus_tag="SARI_02473"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213179"
+ gene complement(2396387..2398159)
+ /locus_tag="SARI_02474"
+ CDS complement(2396387..2398159)
+ /locus_tag="SARI_02474"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR001140"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:ScanRegExp:IPR003439"
+ /note="'KEGG: reh:H16_A0776 5.9e-79 ABC-type transporter,
+ ATPase and permease components: Prot2E family;
+ COG: COG1132 ABC-type multidrug transport system, ATPase
+ and permease components;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="multidrug transporter membrane
+ protein\ATP-binding protein"
+ /protein_id="YP_001571475.2"
+ /db_xref="GI:448236259"
+ /db_xref="InterPro:IPR001140"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MRLFAQLSWYFRREWRRYLGAVALLMLISILQLIPPKVVGIVVD
+ GVTAQHFTSGRIAMWIGAIALIAVVVYLLRYVWRVLLFGASYQLAVELREDYYRQLSR
+ QHPEFYQRHRTGDLIARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQL
+ TLLALLPMPIMALMIKRYGDRLHDYFKGAQAAFSSLNDRTQESLTSIRMIKAFGLEDR
+ QSSLFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAISGGSWMVVNGSLTLGE
+ LTSFMMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVNDGEEPVPAGRGE
+ LTAAIREFRYPQTTHPALENVNFRLKPGQMLGICGPTGAGKSTILSLIQRHFDVTQGE
+ IRFHDMPLTHLQLDSWRSRLAVVSQTPFLFSDSIANNIALGRPEATQEEIEQVARLAS
+ VHEDILRLPQGYDTQVGERGVMLSGGQKQRISIARALLLNAEILLLDDALSAVDGRTE
+ HQILHNLRQWGEGRTVIISAHRLSALTDANEIMVMQHGHVVQRGDHDQLAQQPGWYRD
+ MYRYQQLEAALDDAPESGEEAANA"
+ misc_feature complement(2396390..2398096)
+ /locus_tag="SARI_02474"
+ /note="putative multidrug transporter membrane\ATP-binding
+ components; Provisional; Region: PRK10789"
+ /db_xref="CDD:182732"
+ misc_feature complement(2397287..2398090)
+ /locus_tag="SARI_02474"
+ /note="ABC transporter transmembrane region; Region:
+ ABC_membrane; pfam00664"
+ /db_xref="CDD:216049"
+ misc_feature complement(2396447..2397139)
+ /locus_tag="SARI_02474"
+ /note="ATP-binding cassette transporter nucleotide-binding
+ domain; Region: ABC_ATPase; cl17201"
+ /db_xref="CDD:247755"
+ misc_feature complement(2397032..2397055)
+ /locus_tag="SARI_02474"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(order(2396573..2396575,2396666..2396671,
+ 2396909..2396911,2397029..2397037,2397041..2397046))
+ /locus_tag="SARI_02474"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(2396909..2396920)
+ /locus_tag="SARI_02474"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(2396714..2396743)
+ /locus_tag="SARI_02474"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(2396666..2396683)
+ /locus_tag="SARI_02474"
+ /note="Walker B; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(2396648..2396659)
+ /locus_tag="SARI_02474"
+ /note="D-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(2396567..2396587)
+ /locus_tag="SARI_02474"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213179"
+ gene complement(2398200..2398658)
+ /locus_tag="SARI_02476"
+ CDS complement(2398200..2398658)
+ /locus_tag="SARI_02476"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000485"
+ /inference="protein motif:HMMSmart:IPR000485"
+ /inference="protein motif:ScanRegExp:IPR000485"
+ /inference="protein motif:superfamily:IPR011008"
+ /inference="similar to AA sequence:REFSEQ:YP_851620.1"
+ /note="'COG: COG1522 Transcriptional regulators;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571476.2"
+ /db_xref="GI:448236260"
+ /db_xref="InterPro:IPR000485"
+ /db_xref="InterPro:IPR011008"
+ /db_xref="InterPro:IPR011991"
+ /translation="MLDKIDRKLLSLLQQDCTLSLQALADAVNLTTTPCWKRLKRLED
+ DGILLGRVALLDPEKLGLGLTAFVLIKTQHHSSEWYCRFVTVVTEMPEVLGFWRMAGE
+ YDYLMRVQVADMKRYDDFYKRLVNSVPGLSDVTSSFAMEQIKYTTSLPIE"
+ misc_feature complement(2398206..2398658)
+ /locus_tag="SARI_02476"
+ /note="Transcriptional regulators [Transcription]; Region:
+ Lrp; COG1522"
+ /db_xref="CDD:224439"
+ misc_feature complement(<2398506..2398658)
+ /locus_tag="SARI_02476"
+ /note="Arsenical Resistance Operon Repressor and similar
+ prokaryotic, metal regulated homodimeric repressors. ARSR
+ subfamily of helix-turn-helix bacterial transcription
+ regulatory proteins (winged helix topology). Includes
+ several proteins that appear to...; Region: HTH_ARSR;
+ cd00090"
+ /db_xref="CDD:238042"
+ misc_feature complement(order(2398506..2398511,2398527..2398532,
+ 2398536..2398541,2398548..2398553,2398557..2398568,
+ 2398593..2398601,2398641..2398649))
+ /locus_tag="SARI_02476"
+ /note="putative DNA binding site [nucleotide binding];
+ other site"
+ /db_xref="CDD:238042"
+ misc_feature complement(order(2398590..2398592,2398599..2398601))
+ /locus_tag="SARI_02476"
+ /note="putative Zn2+ binding site [ion binding]; other
+ site"
+ /db_xref="CDD:238042"
+ misc_feature complement(2398233..2398457)
+ /locus_tag="SARI_02476"
+ /note="AsnC family; Region: AsnC_trans_reg; pfam01037"
+ /db_xref="CDD:216258"
+ gene 2398771..2399826
+ /locus_tag="SARI_02475"
+ CDS 2398771..2399826
+ /locus_tag="SARI_02475"
+ /inference="protein motif:HMMPfam:IPR001926"
+ /inference="similar to AA sequence:REFSEQ:YP_215487.1"
+ /note="'KEGG: sec:SC0500 1.1e-187 putative cysteine
+ synthase/cystaTHIonine beta-synthase K01738;
+ COG: COG0031 Cysteine synthase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571477.1"
+ /db_xref="GI:161504364"
+ /db_xref="InterPro:IPR001926"
+ /translation="MMSSNWVKNAINEINADHQRSADTHLIRLPLSAFPGIQLYLKDE
+ STHPTGSLKHRLARSLFLYGLCNGWIKEGTPIIEASSGSTAISEAWFARLLGLPFIAV
+ MPACTAKRKIEQIQFYGGHCHFVERACEIYAASEQLAHELNGHYMDQFTYAERATDWR
+ GNNNIADSIFRQMRSEPHPVPRFIVMSAGTGGTSATIGRYIRCQGYDTQLMVVDPENS
+ VFLPYWQDRDASLRSPVGSKIEGIGRPRVEPSFIPDVVDEMLRVPDAASIAAAHWLET
+ QLGRKVGASTGTNMWGALQLAARMREAGETGAIVTLLCDSGERYLDTYYHPAWVSEHI
+ GDLTPWSAAIAALLTAG"
+ misc_feature 2398810..2399739
+ /locus_tag="SARI_02475"
+ /note="Cysteine synthase [Amino acid transport and
+ metabolism]; Region: CysK; COG0031"
+ /db_xref="CDD:223110"
+ misc_feature 2398840..2399736
+ /locus_tag="SARI_02475"
+ /note="Tryptophan synthase beta superfamily (fold type
+ II); this family of pyridoxal phosphate (PLP)-dependent
+ enzymes catalyzes beta-replacement and beta-elimination
+ reactions. This CD corresponds to
+ aminocyclopropane-1-carboxylate deaminase (ACCD),
+ tryptophan...; Region: Trp-synth-beta_II; cl00342"
+ /db_xref="CDD:241802"
+ misc_feature order(2398924..2398929,2399017..2399019,2399335..2399349,
+ 2399623..2399625,2399710..2399715)
+ /locus_tag="SARI_02475"
+ /note="pyridoxal 5'-phosphate binding pocket [chemical
+ binding]; other site"
+ /db_xref="CDD:107202"
+ misc_feature 2398927..2398929
+ /locus_tag="SARI_02475"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:107202"
+ gene complement(2399878..2400708)
+ /locus_tag="SARI_02477"
+ CDS complement(2399878..2400708)
+ /locus_tag="SARI_02477"
+ /inference="protein motif:HMMPfam:IPR013200"
+ /inference="protein motif:HMMTigr:IPR000150"
+ /inference="protein motif:HMMTigr:IPR006379"
+ /inference="protein motif:ScanRegExp:IPR000150"
+ /inference="similar to AA sequence:INSD:CAD08916.1"
+ /note="'KEGG: aha:AHA_0482 3.3e-21 phosphatase YidA
+ K01112;
+ COG: COG0561 Predicted hydrolases of the HAD superfamily;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571478.1"
+ /db_xref="GI:161504366"
+ /db_xref="InterPro:IPR000150"
+ /db_xref="InterPro:IPR006379"
+ /db_xref="InterPro:IPR013200"
+ /translation="MEKEMARLAAFDMDGTLLMPDHQLGRETIATLSRLRERDITLTF
+ ATGRHVLEMRHILGTLSLDAYLITGNGTRIHSLEGDVLYRQDLDPQVADTVMHHAWDT
+ GASMHVFNDNGWFTGQEIPALLQAHVYSGFRYQVIDIKSIPAHQVMKICFCGDHDSLI
+ RLRIQLNETLEERAHLCFSAVDCLEVLPLGCNKGSALAVLSDHLGLSLADCMAFGDAM
+ NDREMLGSVGQGLIMGNAMPQLIAALPHLSVIGHCGHQAVSHFLTHWLDNPHLPYSPE
+ "
+ misc_feature complement(2399881..2400696)
+ /locus_tag="SARI_02477"
+ /note="thiamin pyrimidine pyrophosphate hydrolase;
+ Provisional; Region: PRK15126"
+ /db_xref="CDD:185080"
+ misc_feature complement(<2400466..2400687)
+ /locus_tag="SARI_02477"
+ /note="Haloacid dehalogenase-like hydrolases. The haloacid
+ dehalogenase-like (HAD) superfamily includes L-2-haloacid
+ dehalogenase, epoxide hydrolase, phosphoserine
+ phosphatase, phosphomannomutase, phosphoglycolate
+ phosphatase, P-type ATPase, and many others; Region:
+ HAD_like; cd01427"
+ /db_xref="CDD:119389"
+ misc_feature complement(order(2400568..2400573,2400667..2400675))
+ /locus_tag="SARI_02477"
+ /note="active site"
+ /db_xref="CDD:119389"
+ misc_feature complement(2400658..2400675)
+ /locus_tag="SARI_02477"
+ /note="motif I; other site"
+ /db_xref="CDD:119389"
+ misc_feature complement(2400571..2400573)
+ /locus_tag="SARI_02477"
+ /note="motif II; other site"
+ /db_xref="CDD:119389"
+ gene 2400797..2402497
+ /locus_tag="SARI_02478"
+ CDS 2400797..2402497
+ /locus_tag="SARI_02478"
+ /inference="protein motif:HMMPfam:IPR000914"
+ /note="'COG: COG4533 ABC-type uncharacterized transport
+ system, periplasmic component;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571479.1"
+ /db_xref="GI:161504367"
+ /db_xref="InterPro:IPR000914"
+ /translation="MRLLNRLNQYQRLWQPSAGEMQYVTVSELAERCFCSERHLRTLL
+ RQAQQAGWLKWEAQSGRGKRGRLQFLVTPESLRTAMMEQALEKGQQLNVLELAQLAPG
+ ELRAMLQPFMGGQWQNDTPTLRIPYYRPLDPLHPGFLPGRAEQHLAGQVFSGLTRFDR
+ DSQYPCGDLAHHWDVSVDGLRWDFYIRSTLHWHNGDTVDTSQLHERLERLLNLPALNK
+ LFISVARITITHPQCLTFFLHRPDYWLAHRLASYCSALAHPDQPLIGTGPFRLALFTP
+ ELVRLESHDYYHLSHPLLKAIEFWITPQLFAQDLGTSCRHPVQIAIGKPEELATLSQV
+ SSGISLGFCYLTIRKGSRLNVQQARRLVHIIHHSSLLKTLPVDENLITPSQALLPGWI
+ IPQWLDVDETPLPKKLTLAYHLPIELHTMAEQLRHYLATLGCELTLIFHNAKNWDNCP
+ ALAQADLMMGDRLIGEAPEYTLEQWLRCDQIWPHVLDAPAFSHLQATLDALQIQPNEK
+ DRRAALQRVFAGLMDDATLTPLFNYHYRISAPPGVNGVRLTPRGWFEFSEAWLPPPSQ
+ "
+ misc_feature 2400836..2402485
+ /locus_tag="SARI_02478"
+ /note="ABC-type uncharacterized transport system,
+ periplasmic component [General function prediction only];
+ Region: COG4533"
+ /db_xref="CDD:226909"
+ misc_feature 2400836..2401153
+ /locus_tag="SARI_02478"
+ /note="Sugar transport-related sRNA regulator N-term;
+ Region: SgrR_N; pfam12793"
+ /db_xref="CDD:193269"
+ misc_feature 2401160..2402479
+ /locus_tag="SARI_02478"
+ /note="The substrate-binding domain of an ABC-type
+ nickel/oligopeptide-like import system contains the type 2
+ periplasmic binding fold; Region:
+ PBP2_NikA_DppA_OppA_like; cl01709"
+ /db_xref="CDD:242664"
+ gene 2402562..2403257
+ /locus_tag="SARI_02479"
+ CDS 2402562..2403257
+ /locus_tag="SARI_02479"
+ /inference="protein motif:HMMPfam:IPR004479"
+ /inference="protein motif:HMMTigr:IPR004479"
+ /inference="similar to AA sequence:REFSEQ:NP_806135.1"
+ /note="'YbaX; catalyzes the transformation of GTP to
+ 7-cyano-7-deazaguanine (preQ0), as one of the early
+ reactions of quenosine biosynthesis; quenosine is a
+ modified nucleoside that occurs at the wobble position of
+ GUN anticodons in tRNAs for Asn, Asp, Tyr, and His'"
+ /codon_start=1
+ /transl_table=11
+ /product="queuosine biosynthesis protein QueC"
+ /protein_id="YP_001571480.1"
+ /db_xref="GI:161504368"
+ /db_xref="InterPro:IPR004479"
+ /translation="MKRAVVVFSGGQDSTTCLAQALHQYDEVHCVTFDYGQRHRAEID
+ VARSLALKLGVRAHKMLDVTLLNELAVSSLTRDSIPVPDYEPNADGIPNTFVPGRNIL
+ FLTLAAIYAYQVKAEAVITGVCETDFSGYPDCRDEFVKALNRAVNLGMAKDIRFETPL
+ MWLDKAETWALADYWGKLNLVREETLTCYNGIKGDGCGHCAACNLRANGLNHYLADKA
+ AVVTAMKQKTGLQ"
+ misc_feature 2402568..2403197
+ /locus_tag="SARI_02479"
+ /note="ExsB is a transcription regulator related protein.
+ It is a subfamily of a Adenosine nucleotide binding
+ superfamily of proteins. This protein family is
+ represented by a single member in nearly every completed
+ large (> 1000 genes) prokaryotic genome. In...; Region:
+ ExsB; cd01995"
+ /db_xref="CDD:238953"
+ misc_feature order(2402580..2402588,2402592..2402603,2402667..2402669,
+ 2402673..2402675)
+ /locus_tag="SARI_02479"
+ /note="Ligand Binding Site [chemical binding]; other site"
+ /db_xref="CDD:238953"
+ gene complement(2403366..2403764)
+ /locus_tag="SARI_02480"
+ CDS complement(2403366..2403764)
+ /locus_tag="SARI_02480"
+ /inference="protein motif:HMMPfam:IPR006683"
+ /inference="protein motif:HMMTigr:IPR006684"
+ /inference="similar to AA sequence:INSD:CAD08913.1"
+ /note="'KEGG: gbe:GbCGDNIH1_1102 1.0e-10 short-chain
+ acyl-CoA hydrolase;
+ COG: COG0824 Predicted THIoesterase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571481.1"
+ /db_xref="GI:161504369"
+ /db_xref="InterPro:IPR006683"
+ /db_xref="InterPro:IPR006684"
+ /translation="MQTQIKVRGYHLDVYQHVNNARYLEFLEEARWDGLENSDGFQWM
+ TARNIAFVVVNININYRRPAVLSDLLTVTSQVQQLNGKSGVLSQTITLEPEGQVVVDA
+ LITFVCIDLKTQKALPLEGELREKLEQMAQ"
+ misc_feature complement(2403435..2403758)
+ /locus_tag="SARI_02480"
+ /note="4-hydroxybenzoyl-CoA thioesterase (4HBT). Catalyzes
+ the final step in the 4-chlorobenzoate degradation pathway
+ in which 4-chlorobenzoate is converted to
+ 4-hydroxybenzoate in certain soil-dwelling bacteria. 4HBT
+ forms a homotetramer with four active sites; Region: 4HBT;
+ cd00586"
+ /db_xref="CDD:238329"
+ misc_feature complement(order(2403516..2403527,2403606..2403608,
+ 2403612..2403614,2403681..2403683))
+ /locus_tag="SARI_02480"
+ /note="active site"
+ /db_xref="CDD:238329"
+ gene complement(2403869..2404243)
+ /locus_tag="SARI_02481"
+ CDS complement(2403869..2404243)
+ /locus_tag="SARI_02481"
+ /inference="protein motif:HMMTigr:IPR004509"
+ /inference="protein motif:superfamily:IPR010994"
+ /inference="similar to AA sequence:INSD:AAV78154.1"
+ /note="'KEGG: bur:Bcep18194_A5099 0.00031 RNA binding S1;
+ COG: COG1555 DNA uptake protein and related DNA-binding
+ proteins;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571482.1"
+ /db_xref="GI:161504370"
+ /db_xref="InterPro:IPR004509"
+ /db_xref="InterPro:IPR010994"
+ /translation="MKHGIKALLITLSLTCAGMAQSALAAEPTAKSQATQTKADTPTN
+ AQSKATQPAKASDDDGTRVSINTASAEDLARVMNGVGLKKAQAIVSYREEYGPFKTVD
+ DLKQVPGMGSSLVERNLTVLTL"
+ misc_feature complement(2403872..2404078)
+ /locus_tag="SARI_02481"
+ /note="competence protein ComEA helix-hairpin-helix repeat
+ region; Region: TIGR00426"
+ /db_xref="CDD:129520"
+ gene complement(2404393..2406264)
+ /locus_tag="SARI_02482"
+ CDS complement(2404393..2406264)
+ /locus_tag="SARI_02482"
+ /inference="protein motif:HMMPfam:IPR000297"
+ /inference="protein motif:ScanRegExp:IPR000297"
+ /note="'KEGG: stm:STM0452 0. cypD; peptidyl prolyl
+ isomerase K03770;
+ COG: COG0760 Parvulin-like peptidyl-prolyl isomerase;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="peptidyl-prolyl cis-trans isomerase (rotamase
+ D)"
+ /protein_id="YP_001571483.1"
+ /db_xref="GI:161504371"
+ /db_xref="InterPro:IPR000297"
+ /translation="MMDSLRTAANSLVLKIIFVIIIVSFILTGVSGYLIGGSNNYAAK
+ VNGQEISRAQFENAFNNERNRMQQQLGDRYSELAANEGYMKSLRQQVLNRLIDEALLD
+ QYSRELKLGISDEQVKQAIFATPAFQVDGRFDNNRYNAIVNQMGMTADQYAQALRNQL
+ TTQQLINGVAGTDFMLKGETDELAALVSQQRVVREATIDVNALAAKQQATDQEVSSYY
+ DQNKTRFMTPEQFRVSYIKLDAATMQAPVSDADIQAYYDQHLDQFTQPERHRYSIIQT
+ KTEDDAKAVLDALNKGEDFATLAKEKSTDIISARNGGDMGWLEESATVPELKNAGLKE
+ KGQISGVIKSSVGFLVARLDDVQPAKVKPLSEVRDDIAAKVKQEKALDAYYALQQKVS
+ DAASNDNESLAGAEQVAGVKAVETGWFSHDNLPEELNFKPVADAIFNGGLVGENGTPG
+ PNSDIITVDGDRAFVVRVSEHKPEAVKPLAAVKEQVIALVKHNKAEQQAKLDAEKLLV
+ ELKAGKGAEAMKAAGLSFGEPKTLSRTSQDPVSQAAFALSLPTKDKPVYGVANDMQGN
+ IVLLALDEVKAGSMPEAQKKAMMQGITQNNAQIVFEALMSNLRKEAKIKIGDALEQQ"
+ misc_feature complement(2404408..2406264)
+ /locus_tag="SARI_02482"
+ /note="periplasmic folding chaperone; Provisional; Region:
+ PRK10788"
+ /db_xref="CDD:182731"
+ misc_feature complement(2405767..>2406162)
+ /locus_tag="SARI_02482"
+ /note="SurA N-terminal domain; Region: SurA_N_3; cl07813"
+ /db_xref="CDD:244798"
+ misc_feature complement(2405158..2405526)
+ /locus_tag="SARI_02482"
+ /note="PPIC-type PPIASE domain; Region: Rotamase_2;
+ pfam13145"
+ /db_xref="CDD:221934"
+ gene complement(2406556..2406828)
+ /locus_tag="SARI_02483"
+ CDS complement(2406556..2406828)
+ /locus_tag="SARI_02483"
+ /inference="protein motif:BlastProDom:IPR000119"
+ /inference="protein motif:FPrintScan:IPR000119"
+ /inference="protein motif:Gene3D:IPR000119"
+ /inference="protein motif:HMMPfam:IPR000119"
+ /inference="protein motif:HMMSmart:IPR000119"
+ /inference="protein motif:ScanRegExp:IPR000119"
+ /inference="protein motif:superfamily:IPR010992"
+ /inference="similar to AA sequence:INSD:AAL19406.1"
+ /note="histone-like DNA-binding protein"
+ /codon_start=1
+ /transl_table=11
+ /product="transcriptional regulator HU subunit beta"
+ /protein_id="YP_001571484.1"
+ /db_xref="GI:161504372"
+ /db_xref="InterPro:IPR000119"
+ /db_xref="InterPro:IPR010992"
+ /translation="MNKSQLIEKIAAGADISKAAAGRALDAIIASVTESLKEGDDVAL
+ VGFGTFAVKERAARTGRNPQTGKEITIAAAKVPSFRAGKALKDAVN"
+ misc_feature complement(2406565..2406825)
+ /locus_tag="SARI_02483"
+ /note="Integration host factor (IHF) and HU are small
+ heterodimeric members of the DNABII protein family that
+ bind and bend DNA, functioning as architectural factors in
+ many cellular processes including transcription,
+ site-specific recombination, and...; Region: HU_IHF;
+ cd00591"
+ /db_xref="CDD:238332"
+ misc_feature complement(order(2406565..2406567,2406586..2406588,
+ 2406592..2406594,2406604..2406609,2406673..2406675,
+ 2406688..2406693,2406700..2406714,2406724..2406729,
+ 2406736..2406741,2406748..2406750,2406790..2406792,
+ 2406802..2406804,2406811..2406813,2406820..2406825))
+ /locus_tag="SARI_02483"
+ /note="IHF dimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238332"
+ misc_feature complement(order(2406580..2406582,2406589..2406591,
+ 2406595..2406597,2406607..2406609,2406637..2406648,
+ 2406655..2406657,2406661..2406666,2406670..2406672,
+ 2406682..2406684,2406691..2406696,2406700..2406702,
+ 2406706..2406708,2406751..2406753,2406817..2406825))
+ /locus_tag="SARI_02483"
+ /note="IHF - DNA interface [nucleotide binding]; other
+ site"
+ /db_xref="CDD:238332"
+ unsure 2406783..2406789
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(2407037..2409391)
+ /locus_tag="SARI_02484"
+ CDS complement(2407037..2409391)
+ /locus_tag="SARI_02484"
+ /inference="protein motif:HMMPfam:IPR003111"
+ /inference="protein motif:HMMPfam:IPR003959"
+ /inference="protein motif:HMMPfam:IPR008269"
+ /inference="protein motif:HMMSmart:IPR003111"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR004815"
+ /inference="protein motif:ScanRegExp:IPR001412"
+ /inference="protein motif:ScanRegExp:IPR008268"
+ /note="'KEGG: stm:STM0450 0. lon; ATP-dependent protease
+ Lon K01338;
+ COG: COG0466 ATP-dependent Lon protease, bacterial type;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding ATP-dependent protease La"
+ /protein_id="YP_001571485.1"
+ /db_xref="GI:161504373"
+ /db_xref="InterPro:IPR001412"
+ /db_xref="InterPro:IPR003111"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR003959"
+ /db_xref="InterPro:IPR004815"
+ /db_xref="InterPro:IPR008268"
+ /db_xref="InterPro:IPR008269"
+ /translation="MNPERSERIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAM
+ DHDKKIMLVAQKEASTDEPGVNDLFTVGTVASILQMLKLPDGTVKVLVEGLQRARISA
+ LSDNGEHFSAKAEYLDSPAIDEREQEVLVRTAISQFEGYIKLNKKIPPEVLTSLNSID
+ DPARLADTIAAHMPLKLADKQSVLEMSDVNERLEYLMAMMESEIDLLQVEKRIRNRVK
+ KQMEKSQREYYLNEQMKAIQKELGEMDDAPDENEALKRKIDAAKMPKEAKEKAEAELQ
+ KLKMMSPMSAEATVVRGYIDWMVQVPWNARSKVKKDLRQAQEILDTDHYGLERVKDRI
+ LEYLAVQSRVNKLKGPILCLVGPPGVGKTSLGQSIAKATGRKYIRMALGGVRDEAEIR
+ GHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNV
+ AFSDHYLEVDYDLSDVMFVATSNSMNIPAPLLDRMEVIRLSGYTEDEKLNIAKRHLLP
+ KQIERNALKKGELTVDDSAIIGIIRYYTREAGVRSLEREISKLCRKAVKQLLLDKSLK
+ NIVINGDNLHDYLGVQRFDYGRADSENRVGQVTGLAWTEVGGDLLTIETACVPGKGKL
+ TYTGSLGEVMQESIQAALTVVRARAEKLGINPDFYEKRDIHVHVPEGATPKDGPSAGI
+ AMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKTVLIPFEN
+ KRDLEEIPDNVIADLDIHPVKRIEEVLTFALQNEPSGMQVVTAK"
+ misc_feature complement(2407040..2409391)
+ /locus_tag="SARI_02484"
+ /note="DNA-binding ATP-dependent protease La; Provisional;
+ Region: PRK10787"
+ /db_xref="CDD:182730"
+ misc_feature complement(<2409206..2409364)
+ /locus_tag="SARI_02484"
+ /note="Found in ATP-dependent protease La (LON); Region:
+ LON; smart00464"
+ /db_xref="CDD:197740"
+ misc_feature complement(2408810..>2408914)
+ /locus_tag="SARI_02484"
+ /note="Found in ATP-dependent protease La (LON); Region:
+ LON; smart00464"
+ /db_xref="CDD:197740"
+ misc_feature complement(2407928..2408401)
+ /locus_tag="SARI_02484"
+ /note="The AAA+ (ATPases Associated with a wide variety of
+ cellular Activities) superfamily represents an ancient
+ group of ATPases belonging to the ASCE (for additional
+ strand, catalytic E) division of the P-loop NTPase fold.
+ The ASCE division also includes ABC; Region: AAA; cd00009"
+ /db_xref="CDD:99707"
+ misc_feature complement(2408303..2408326)
+ /locus_tag="SARI_02484"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(order(2407973..2407975,2408123..2408125,
+ 2408300..2408323))
+ /locus_tag="SARI_02484"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(2408120..2408137)
+ /locus_tag="SARI_02484"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(2407940..2407942)
+ /locus_tag="SARI_02484"
+ /note="arginine finger; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(2407079..2407687)
+ /locus_tag="SARI_02484"
+ /note="Lon protease (S16) C-terminal proteolytic domain;
+ Region: Lon_C; pfam05362"
+ /db_xref="CDD:191262"
+ unsure 2407393..2407972
+ /note="Sequence derived from one plasmid subclone"
+ unsure 2409426..2409596
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(2409577..2410848)
+ /gene="clpX"
+ /locus_tag="SARI_02485"
+ CDS complement(2409577..2410848)
+ /gene="clpX"
+ /locus_tag="SARI_02485"
+ /inference="protein motif:HMMPanther:IPR004487"
+ /inference="protein motif:HMMPfam:IPR010603"
+ /inference="protein motif:HMMPfam:IPR013093"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR004487"
+ /inference="similar to AA sequence:INSD:AAX64397.1"
+ /note="binds and unfolds substrates as part of the ClpXP
+ protease"
+ /codon_start=1
+ /transl_table=11
+ /product="ATP-dependent protease ATP-binding subunit ClpX"
+ /protein_id="YP_001571486.1"
+ /db_xref="GI:161504374"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR004487"
+ /db_xref="InterPro:IPR010603"
+ /db_xref="InterPro:IPR013093"
+ /translation="MTDKRKDGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLC
+ NDIIREEIKEVAPHRERSALPTPHEIRIHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG
+ DTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVEN
+ IIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT
+ VAAVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVKA
+ KSDKASEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALT
+ KQYQALFNLEGVDLEFRDEALDAIARKAMARKTGARGLRSIVEAALLDTMYDLPSMED
+ VEKVVIDESVIDGQSKPLLIYGKPEAQASGE"
+ misc_feature complement(2409598..2410839)
+ /gene="clpX"
+ /locus_tag="SARI_02485"
+ /note="ATP-dependent protease ATP-binding subunit ClpX;
+ Provisional; Region: clpX; PRK05342"
+ /db_xref="CDD:235422"
+ misc_feature complement(2410696..2410812)
+ /gene="clpX"
+ /locus_tag="SARI_02485"
+ /note="ClpX C4-type zinc finger; Region: zf-C4_ClpX;
+ pfam06689"
+ /db_xref="CDD:203502"
+ misc_feature complement(<2410264..2410614)
+ /gene="clpX"
+ /locus_tag="SARI_02485"
+ /note="The AAA+ (ATPases Associated with a wide variety of
+ cellular Activities) superfamily represents an ancient
+ group of ATPases belonging to the ASCE (for additional
+ strand, catalytic E) division of the P-loop NTPase fold.
+ The ASCE division also includes ABC; Region: AAA; cd00009"
+ /db_xref="CDD:99707"
+ misc_feature complement(2410471..2410494)
+ /gene="clpX"
+ /locus_tag="SARI_02485"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(order(2410297..2410299,2410468..2410491))
+ /gene="clpX"
+ /locus_tag="SARI_02485"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(2410294..2410311)
+ /gene="clpX"
+ /locus_tag="SARI_02485"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(2409988..>2410200)
+ /gene="clpX"
+ /locus_tag="SARI_02485"
+ /note="Iron permease FTR1 family; Region: FTR1; cl00475"
+ /db_xref="CDD:241890"
+ misc_feature complement(2409649..2409900)
+ /gene="clpX"
+ /locus_tag="SARI_02485"
+ /note="C-terminal, D2-small domain, of ClpB protein;
+ Region: ClpB_D2-small; smart01086"
+ /db_xref="CDD:198154"
+ gene complement(2410975..2411598)
+ /locus_tag="SARI_02486"
+ CDS complement(2410975..2411598)
+ /locus_tag="SARI_02486"
+ /inference="protein motif:HMMPanther:IPR001907"
+ /inference="protein motif:HMMPfam:IPR001907"
+ /inference="protein motif:HMMTigr:IPR001907"
+ /inference="protein motif:ScanRegExp:IPR001907"
+ /inference="similar to AA sequence:INSD:AAX64396.1"
+ /note="'KEGG: sec:SC0490 1.1e-125 clpP; proteolytic
+ subunit of ClpA-ClpP ATP-dependent serine protease, heat
+ shock protein F215 K01358;
+ COG: COG0740 Protease subunit of ATP-dependent Clp
+ proteases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="ClpP-like protease"
+ /protein_id="YP_001571487.2"
+ /db_xref="GI:448236261"
+ /db_xref="InterPro:IPR001907"
+ /translation="MSYSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIF
+ LTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVS
+ TICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVK
+ GRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN"
+ misc_feature complement(2410978..2411559)
+ /locus_tag="SARI_02486"
+ /note="Protease subunit of ATP-dependent Clp proteases
+ [Posttranslational modification, protein turnover,
+ chaperones / Intracellular trafficking and secretion];
+ Region: ClpP; COG0740"
+ /db_xref="CDD:223811"
+ misc_feature complement(2410993..2411505)
+ /locus_tag="SARI_02486"
+ /note="Caseinolytic protease (ClpP) is an ATP-dependent,
+ highly conserved serine protease; Region: S14_ClpP_2;
+ cd07017"
+ /db_xref="CDD:132928"
+ misc_feature complement(order(2411038..2411040,2411044..2411046,
+ 2411113..2411115,2411119..2411121,2411125..2411127,
+ 2411134..2411136,2411176..2411187,2411203..2411205,
+ 2411209..2411211,2411275..2411277,2411299..2411301,
+ 2411311..2411316,2411323..2411325,2411332..2411334,
+ 2411344..2411346,2411365..2411367,2411410..2411412,
+ 2411419..2411424,2411431..2411436,2411461..2411463,
+ 2411467..2411469))
+ /locus_tag="SARI_02486"
+ /note="oligomer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:132928"
+ misc_feature complement(order(2411044..2411046,2411191..2411193,
+ 2411266..2411268))
+ /locus_tag="SARI_02486"
+ /note="active site residues [active]"
+ /db_xref="CDD:132928"
+ gene complement(2411845..2413143)
+ /gene="tig"
+ /locus_tag="SARI_02487"
+ CDS complement(2411845..2413143)
+ /gene="tig"
+ /locus_tag="SARI_02487"
+ /inference="protein motif:HMMPfam:IPR001179"
+ /inference="protein motif:HMMPfam:IPR008880"
+ /inference="protein motif:HMMPfam:IPR008881"
+ /inference="protein motif:HMMPIR:IPR005215"
+ /inference="protein motif:HMMTigr:IPR005215"
+ /inference="similar to AA sequence:INSD:CAD08906.1"
+ /note="Tig; RopA; peptidyl-prolyl cis/trans isomerase;
+ promotes folding of newly synthesized proteins; binds
+ ribosomal 50S subunit; forms a homodimer"
+ /codon_start=1
+ /transl_table=11
+ /product="trigger factor"
+ /protein_id="YP_001571488.1"
+ /db_xref="GI:161504376"
+ /db_xref="InterPro:IPR001179"
+ /db_xref="InterPro:IPR005215"
+ /db_xref="InterPro:IPR008880"
+ /db_xref="InterPro:IPR008881"
+ /translation="MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGF
+ RKGKVPMNIVAQRYGASVRQDVLGDLMSRNFVDAIIKEKINPAGAPNYVPGEYKVGED
+ FTYSVEFEVYPEVELTGLESIEVEKPVVEVTDADVDVMLDTLRKQQATWKEKDGAADA
+ EDRVTLDFTGTVDGEEFEGGKATDFVLAMGQGRMIPGFEDGVKGHKVGEEFTIDVTFP
+ EEYHAENLKGKAAKFAINLKKVEERELPELTEEFIKRFGVEDGSVAGLRAEVRKNMER
+ ELKGAVRNRVKSQAIEGLVKANDIDVPSALIDSEIDVLRRQAAQRFGGNEKQALELPR
+ ELFEEQAKRRVVVGLLLGEVIRTNELKADEVRVKGLIEEMASAYEDPKEVIEFYSKNK
+ ELMDNMRNVALEEQAIEAVLAKAKVSEKATSFNELMNQQA"
+ misc_feature complement(2411857..2413143)
+ /gene="tig"
+ /locus_tag="SARI_02487"
+ /note="trigger factor; Provisional; Region: tig; PRK01490"
+ /db_xref="CDD:234956"
+ misc_feature complement(2412430..2412684)
+ /gene="tig"
+ /locus_tag="SARI_02487"
+ /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
+ Region: FKBP_C; pfam00254"
+ /db_xref="CDD:215821"
+ misc_feature complement(2411905..2412360)
+ /gene="tig"
+ /locus_tag="SARI_02487"
+ /note="Bacterial trigger factor protein (TF) C-terminus;
+ Region: Trigger_C; pfam05698"
+ /db_xref="CDD:218701"
+ gene complement(2413490..2413807)
+ /locus_tag="SARI_02488"
+ CDS complement(2413490..2413807)
+ /locus_tag="SARI_02488"
+ /inference="protein motif:HMMPanther:IPR002634"
+ /inference="protein motif:HMMPfam:IPR002634"
+ /inference="similar to AA sequence:INSD:CAD08905.1"
+ /note="'positive transcriptional regulator of
+ morphogenetic pathway; controlling several genes involved
+ in oxidative stress, acid stress, heat shock, osmotic
+ shock, and carbon-starvation stress'"
+ /codon_start=1
+ /transl_table=11
+ /product="transcriptional regulator BolA"
+ /protein_id="YP_001571489.1"
+ /db_xref="GI:161504377"
+ /db_xref="InterPro:IPR002634"
+ /translation="MMIREQIEEKLRTAFDPVFLEVVDESYRHNVPAGSESHFKVVLV
+ SDRFTGERFLNRHRMIYGTLTAELSTTVHALALHTYTLKEWEGLQDTIFASPPCRGAG
+ SIA"
+ misc_feature complement(2413493..2413807)
+ /locus_tag="SARI_02488"
+ /note="transcriptional regulator BolA; Provisional;
+ Region: PRK11628"
+ /db_xref="CDD:183243"
+ gene 2414055..2414687
+ /locus_tag="SARI_02489"
+ CDS 2414055..2414687
+ /locus_tag="SARI_02489"
+ /inference="protein motif:BlastProDom:IPR005619"
+ /inference="protein motif:HMMPfam:IPR005619"
+ /inference="similar to AA sequence:REFSEQ:YP_215474.1"
+ /note="'COG: COG3056 Uncharacterized lipoprotein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571490.1"
+ /db_xref="GI:161504378"
+ /db_xref="InterPro:IPR005619"
+ /translation="MMAGIFIYHVLSVIESPNMLKKLLFPLVALIMLAGCATPPTTID
+ VAPKITLPQQDPSLMGVTVSINGADQRQDQALAKVTRNNQLVTLTASRDLRFLLQEVL
+ EKQMTARGYMIGPGGAVNLQIIVNQLYADVSQGSLRYNIATKADIAIIATAANGNKMT
+ KNYRASYSVEGPFQASNQNIADAVNSVLTDTIADMSQDTSIHDFIKQNAR"
+ misc_feature 2414109..2414684
+ /locus_tag="SARI_02489"
+ /note="hypothetical protein; Provisional; Region:
+ PRK11627"
+ /db_xref="CDD:183242"
+ misc_feature 2414193..2414672
+ /locus_tag="SARI_02489"
+ /note="Uncharacterized lipoprotein; Region:
+ Lipoprotein_16; pfam03923"
+ /db_xref="CDD:217795"
+ gene 2414725..2416206
+ /gene="ampG"
+ /locus_tag="SARI_02490"
+ CDS 2414725..2416206
+ /gene="ampG"
+ /locus_tag="SARI_02490"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="protein motif:HMMTigr:IPR004752"
+ /inference="similar to AA sequence:REFSEQ:YP_215473.1"
+ /note="in Escherichia coli this protein is a permease
+ involved in peptidoglycan recycling; member of major
+ facilitator superfamily; MFS; inner membrane protein"
+ /codon_start=1
+ /transl_table=11
+ /product="muropeptide transporter"
+ /protein_id="YP_001571491.1"
+ /db_xref="GI:161504379"
+ /db_xref="InterPro:IPR004752"
+ /db_xref="InterPro:IPR011701"
+ /translation="MPMPNHYLRIFQQPRSAILLILGFASGLPLALTSGTLQAWMTVE
+ NIDLKTIGFFSLVGQAYVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLASIAAMGF
+ LEPGTQLRWMAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLGMLV
+ SGGLALWLADRWLGWQGMYWLMAALLIPCIIATLLAPEPTDTIPAPKSLEQAVVAPLR
+ DFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGVVNKTLGLLATIV
+ GALYGGMLMQRLSLFRALLIFGILQGASNAGYWLLSITDKNMFSMGAAVFFENLCGGM
+ GTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAYGWPTFYLFSVV
+ AAAPGLLLLLVCRQTLEYSWQSERFIPRTAYRSAYNLALLILLAGVVLLAAWILLLTM
+ NAMNYTHFSFLPGLLETAVAVAVCGIVFGGLLDYLALRKTRLT"
+ misc_feature 2414773..2415951
+ /gene="ampG"
+ /locus_tag="SARI_02490"
+ /note="muropeptide transporter; Reviewed; Region: ampG;
+ PRK11902"
+ /db_xref="CDD:183369"
+ misc_feature 2414773..2415909
+ /gene="ampG"
+ /locus_tag="SARI_02490"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature order(2414812..2414814,2414821..2414829,2414833..2414838,
+ 2414887..2414889,2414896..2414901,2414914..2414919,
+ 2414923..2414928,2415091..2415096,2415103..2415108,
+ 2415115..2415120,2415127..2415129,2415163..2415168,
+ 2415175..2415180,2415196..2415198,2415433..2415435,
+ 2415442..2415447,2415454..2415459,2415466..2415468,
+ 2415508..2415510,2415520..2415522,2415535..2415537,
+ 2415544..2415546,2415556..2415558,2415709..2415711,
+ 2415718..2415723,2415730..2415732,2415742..2415747,
+ 2415754..2415756,2415787..2415792,2415799..2415804,
+ 2415811..2415816,2415823..2415825)
+ /gene="ampG"
+ /locus_tag="SARI_02490"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ unsure 2415020..2415261
+ /gene="ampG"
+ /locus_tag="SARI_02490"
+ /note="Sequence derived from one plasmid subclone"
+ gene 2416659..2417615
+ /locus_tag="SARI_02491"
+ CDS 2416659..2417615
+ /locus_tag="SARI_02491"
+ /inference="protein motif:HMMPfam:IPR002429"
+ /inference="protein motif:HMMPfam:IPR010514"
+ /inference="protein motif:HMMPIR:IPR012141"
+ /inference="protein motif:HMMTigr:IPR006333"
+ /inference="protein motif:superfamily:IPR008972"
+ /inference="similar to AA sequence:INSD:AAL19398.1"
+ /note="'KEGG: sec:SC0485 1.0e-168 cyoA; cytochrome o
+ ubiquinol oxidase subunit II K02297;
+ COG: COG1622 Heme/copper-type cytochrome/quinol oxidases,
+ subunit 2;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="cytochrome o ubiquinol oxidase subunit II"
+ /protein_id="YP_001571492.1"
+ /db_xref="GI:161504380"
+ /db_xref="InterPro:IPR002429"
+ /db_xref="InterPro:IPR006333"
+ /db_xref="InterPro:IPR008972"
+ /db_xref="InterPro:IPR010514"
+ /db_xref="InterPro:IPR012141"
+ /translation="MRLRKYNKSLGWLSLIAGAALLSGCNSALLDPKGQIGLEQRSLI
+ LTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIF
+ LAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTP
+ VYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGM
+ KFKAIATKDRAEFDQWVAKAKQSPNTMNDMAAFEKVAMPSEYNRVEYFSSVKQDLFKD
+ VINKFMSHGKSMDMTQPEGEHSSHEGMEGMDMSHAESANSKG"
+ misc_feature 2416659..2417603
+ /locus_tag="SARI_02491"
+ /note="cytochrome o ubiquinol oxidase subunit II;
+ Provisional; Region: PRK10525"
+ /db_xref="CDD:182518"
+ misc_feature <2417109..2417333
+ /locus_tag="SARI_02491"
+ /note="Cytochrome C oxidase subunit II, periplasmic
+ domain; Region: COX2; pfam00116"
+ /db_xref="CDD:201014"
+ misc_feature 2417373..2417516
+ /locus_tag="SARI_02491"
+ /note="COX Aromatic Rich Motif; Region: COX_ARM;
+ pfam06481"
+ /db_xref="CDD:203465"
+ gene 2417626..2419617
+ /locus_tag="SARI_02492"
+ CDS 2417626..2419617
+ /locus_tag="SARI_02492"
+ /inference="protein motif:FPrintScan:IPR000883"
+ /inference="protein motif:Gene3D:IPR000883"
+ /inference="protein motif:HMMPanther:IPR000883"
+ /inference="protein motif:HMMPfam:IPR000883"
+ /inference="protein motif:ScanRegExp:IPR000883"
+ /inference="protein motif:superfamily:IPR000883"
+ /note="'KEGG: stt:t2418 0. cyoB; cytochrome o ubiquinol
+ oxidase subunit I K02298;
+ COG: COG0843 Heme/copper-type cytochrome/quinol oxidases,
+ subunit 1;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="cytochrome o ubiquinol oxidase subunit I"
+ /protein_id="YP_001571493.1"
+ /db_xref="GI:161504381"
+ /db_xref="InterPro:IPR000883"
+ /translation="MFGKLSLDAVPFHEPIVMVTIAAIIVGGLAILAAITYFGKWTYL
+ WKEWLTSVDHKRLGIMYIIVAIVMLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQI
+ FTAHGVIMIFFVAMPFVIGLMNLVVPLQIGARDVAFPFLNNLSFWFTVVGVILVNLSL
+ GVGEFAQTGWLAYPPLSGIEYSPSVGVDYWIWALQLSGIGTTLTGINFFVTILKMRAP
+ GMTMFKMPVFTWASLCANVLIIASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYI
+ NLIWAWGHPEVYILILPVFGVFSEIAATFSRKRLFGYTSLVWATVCITVLSFIVWLHH
+ FFTMGAGANVNAFFGITTMIIAIPTGVKIFNWLFTMYQGRIVFHSAMMWTIGFIVTFS
+ VGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGGVVFGCFAGMTYWWPKAFGFKLNE
+ TWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQIDPQFHTMLMVAAAGAALIALG
+ ILCQLIQIFVSIRDREQNRDLTGDPWGGRTLEWSTSSPPPFYNFAVVPHVHERDAFWE
+ MKEKGEAYQQPGHYEEIHMPKNSGAGIVIAAFATVFGFAMIWHIWWLAIVGFAGMIIS
+ WIVKSFDEDVDYYVPVRDVEKLENQHFDEITKAGLKNGN"
+ misc_feature 2417737..2419449
+ /locus_tag="SARI_02492"
+ /note="Heme/copper-type cytochrome/quinol oxidases,
+ subunit 1 [Energy production and conversion]; Region:
+ CyoB; COG0843"
+ /db_xref="CDD:223913"
+ misc_feature 2417767..2419281
+ /locus_tag="SARI_02492"
+ /note="Ubiquinol oxidase subunit I. Ubiquinol oxidase,
+ the terminal oxidase in the respiratory chains of aerobic
+ bacteria, is a multi-chain transmembrane protein located
+ in the cell membrane. It catalyzes the reduction of O2
+ and simultaneously pumps protons...; Region:
+ Ubiquinol_Oxidase_I; cd01662"
+ /db_xref="CDD:238832"
+ misc_feature order(2417806..2417808,2417998..2418000,2418028..2418030,
+ 2418049..2418051,2418058..2418060,2418223..2418228,
+ 2418244..2418246,2418256..2418258)
+ /locus_tag="SARI_02492"
+ /note="D-pathway; other site"
+ /db_xref="CDD:238832"
+ misc_feature order(2417836..2417838,2417848..2417850,2417857..2417862,
+ 2417917..2417919,2417926..2417934)
+ /locus_tag="SARI_02492"
+ /note="Putative ubiquinol binding site [chemical binding];
+ other site"
+ /db_xref="CDD:238832"
+ misc_feature order(2417941..2417943,2418886..2418888,2418898..2418900,
+ 2419024..2419026,2419138..2419140)
+ /locus_tag="SARI_02492"
+ /note="Low-spin heme (heme b) binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:238832"
+ misc_feature order(2418436..2418438,2418451..2418456,2418844..2418846,
+ 2418856..2418861,2419066..2419068)
+ /locus_tag="SARI_02492"
+ /note="Putative water exit pathway; other site"
+ /db_xref="CDD:238832"
+ misc_feature order(2418475..2418477,2418622..2418627,2418880..2418882)
+ /locus_tag="SARI_02492"
+ /note="Binuclear center (heme o3/CuB) [ion binding]; other
+ site"
+ /db_xref="CDD:238832"
+ misc_feature order(2418475..2418477,2418487..2418489,2418520..2418522,
+ 2418622..2418627,2418700..2418702,2418709..2418711)
+ /locus_tag="SARI_02492"
+ /note="K-pathway; other site"
+ /db_xref="CDD:238832"
+ misc_feature order(2418625..2418627,2418856..2418861,2419066..2419071)
+ /locus_tag="SARI_02492"
+ /note="Putative proton exit pathway; other site"
+ /db_xref="CDD:238832"
+ gene 2419607..2420221
+ /locus_tag="SARI_02493"
+ CDS 2419607..2420221
+ /locus_tag="SARI_02493"
+ /inference="protein motif:BlastProDom:IPR000298"
+ /inference="protein motif:Gene3D:IPR013833"
+ /inference="protein motif:HMMPanther:IPR000298"
+ /inference="protein motif:HMMPfam:IPR000298"
+ /inference="protein motif:superfamily:IPR000298"
+ /inference="similar to AA sequence:INSD:AAV78166.1"
+ /note="'KEGG: sty:STY0483 1.9e-107 cyoC; cytochrome o
+ ubiquinol oxidase subunit III K02299;
+ COG: COG1845 Heme/copper-type cytochrome/quinol oxidase,
+ subunit 3;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="cytochrome o ubiquinol oxidase subunit III"
+ /protein_id="YP_001571494.1"
+ /db_xref="GI:161504382"
+ /db_xref="InterPro:IPR000298"
+ /db_xref="InterPro:IPR013833"
+ /translation="MATDTLTHATAHAHEHGHHDAGQTKVFGFWIYLMSDCILFSILF
+ ATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAAIAMHKNNQSQVISWL
+ ALTFLFGAGFIGMEIYEFHHLIVEGMGPDRSGFLSAFFALVGTHGLHVTSGLIWMAVL
+ MVQVARRGLTSTNRTRIMCLSLFWHFLDVIWICVFTVVYLMGAM"
+ misc_feature 2419676..2420212
+ /locus_tag="SARI_02493"
+ /note="Ubiquinol oxidase subunit III subfamily. Ubiquinol
+ oxidase, the terminal oxidase in the respiratory chains of
+ aerobic bacteria, is a multi-chain transmembrane protein
+ located in the cell membrane. It catalyzes the reduction
+ of O2 and simultaneously...; Region:
+ Ubiquinol_oxidase_III; cd02863"
+ /db_xref="CDD:239214"
+ misc_feature order(2419676..2419678,2419688..2419690,2419697..2419699,
+ 2419718..2419723,2419730..2419735,2419742..2419744)
+ /locus_tag="SARI_02493"
+ /note="Subunit I/III interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:239214"
+ misc_feature order(2419694..2419696,2419718..2419720,2419829..2419831,
+ 2419838..2419840,2419850..2419855,2420138..2420140,
+ 2420159..2420161)
+ /locus_tag="SARI_02493"
+ /note="Subunit III/IV interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:239214"
+ gene 2420221..2420550
+ /locus_tag="SARI_02494"
+ CDS 2420221..2420550
+ /locus_tag="SARI_02494"
+ /inference="protein motif:HMMPfam:IPR005171"
+ /inference="similar to AA sequence:INSD:AAV78167.1"
+ /note="'KEGG: eci:UTI89_C0452 3.0e-52 cyoD; cytochrome o
+ ubiquinol oxidase protein CyoD K02300;
+ COG: COG3125 Heme/copper-type cytochrome/quinol oxidase,
+ subunit 4;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="cytochrome o ubiquinol oxidase subunit IV"
+ /protein_id="YP_001571495.1"
+ /db_xref="GI:161504383"
+ /db_xref="InterPro:IPR005171"
+ /translation="MSHSTESGGASHGSVKTYMTGFILSVILTVIPFWMVMTGAASPA
+ VILGSILAMAVVQILVHLVCFLHMNTKSDEGWNMTAFIFTVLIIAILVVGSIWIMWNL
+ NYNMMMH"
+ misc_feature 2420221..2420547
+ /locus_tag="SARI_02494"
+ /note="cytochrome o ubiquinol oxidase subunit IV;
+ Provisional; Region: PRK10582"
+ /db_xref="CDD:182568"
+ gene 2420562..2421452
+ /locus_tag="SARI_02495"
+ CDS 2420562..2421452
+ /locus_tag="SARI_02495"
+ /inference="protein motif:HMMPfam:IPR000537"
+ /inference="protein motif:HMMTigr:IPR006369"
+ /inference="protein motif:ScanRegExp:IPR000537"
+ /inference="protein motif:ScanRegExp:IPR001969"
+ /inference="protein motif:superfamily:IPR011014"
+ /inference="similar to AA sequence:INSD:AAL19394.1"
+ /note="converts protoheme IX and farnesyl diphosphate to
+ heme O"
+ /codon_start=1
+ /transl_table=11
+ /product="protoheme IX farnesyltransferase"
+ /protein_id="YP_001571496.1"
+ /db_xref="GI:161504384"
+ /db_xref="InterPro:IPR000537"
+ /db_xref="InterPro:IPR001969"
+ /db_xref="InterPro:IPR006369"
+ /db_xref="InterPro:IPR011014"
+ /translation="MMFKQYLQVTKPGIIFGNLISVIGGFLLASKGSIDYPLFIYTLV
+ GVSLVVASGCVFNNFIDRDIDRKMERTKNRVLVKGLISPGVSLVYATLLGIAGFMLLW
+ FGANPLACWLGVMGFVVYVGIYSLYMKRHSVYGTLIGSLSGAAPPVIGYCAVTGDFDS
+ GAAILLAIFSLWQMPHSYAIAIFRLKDYQAANIPVLPVVKGISVAKNHITLYIIAFAV
+ ATLMLTLGGYAGYKYLVVAAAVSVWWLGMALRGYKVEDDKVWARKLFGFSIIAITALS
+ IMMSVDFMVPNSQSLLTYVW"
+ misc_feature 2420562..2421449
+ /locus_tag="SARI_02495"
+ /note="protoheme IX farnesyltransferase; Provisional;
+ Region: PRK13362"
+ /db_xref="CDD:184001"
+ misc_feature 2420616..2421377
+ /locus_tag="SARI_02495"
+ /note="UbiA prenyltransferase family; Region: UbiA;
+ pfam01040"
+ /db_xref="CDD:216260"
+ gene complement(2421661..2421834)
+ /locus_tag="SARI_02497"
+ CDS complement(2421661..2421834)
+ /locus_tag="SARI_02497"
+ /note="'Psort location: cytoskeletal, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571497.1"
+ /db_xref="GI:161504386"
+ /translation="MILNINNCMYRQDIILMPCHNYTYEYFINRNHLTKKIVQLFFIY
+ HYKYCFYIKNVDK"
+ gene 2421785..2422909
+ /locus_tag="SARI_02496"
+ CDS 2421785..2422909
+ /locus_tag="SARI_02496"
+ /inference="similar to AA sequence:INSD:CAJ61783.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571498.1"
+ /db_xref="GI:161504385"
+ /translation="MRIISCRYIQLFIFNIKQQDYIMNEQDVYLISNESGADKCPEGK
+ LALYTNVRFNTGEMGDILIISPNVQLNKAQLESYGFIVGAHDGVSSVVNNMGQDATLV
+ SGLYLDGQTLTVKPGTNIPTLIECPLGSGNWNDAVNSVVSADIETVDLTMSIESVIVL
+ EEEEGYSALLQIHNNSSESVDNVTVTASSSNSAVFSVETGTQTTSIAGNETTNVRIPL
+ LGKGQGSATLTCQLTMPFGIVNNGNNMTQTAVTVSDVRPLHVTQSFAGDWQDTWPSTK
+ YIYSYKLILSSAETEVDKWELSFALPDGAEVYPKWLESESSWVKLNTEKSVNGNVYLD
+ SEPGHVIAPDKNIELDIQILYPNQSSDYQTLKNLRLMQLA"
+ gene 2423243..2424607
+ /locus_tag="SARI_02498"
+ CDS 2423243..2424607
+ /locus_tag="SARI_02498"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="similar to AA sequence:INSD:"
+ /note="'KEGG: shn:Shewana3_1692 5.1e-07 Xaa-His
+ dipeptidase K01270;
+ COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571499.1"
+ /db_xref="GI:161504387"
+ /db_xref="InterPro:IPR011701"
+ /translation="MNDYKMTPGELRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQG
+ ASEALIGIAIGIYGLAQAIFQIPFGLLSDRIGRKPLIVGGLAVFVAGSVIAALSHSIW
+ GIILGRALQGSGAIAAAVMALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIVTH
+ ILGLNALFWMIAALATLGIILTLWVVPNSTNHVLNRESGMVKGSFNKVLAEPRLLKLN
+ FGIMCLHILLMSTFVALPGQLADAGFPAAEHWKVYLATMVIAFAAVVPFIIYAEVKRR
+ MKQVFLFCVGLIIVAEILLWEAGQHFWELVIGVQLFFLAFNLMEALLPSLISKESPAG
+ YKGTAMGVYSTSQFLGVALGGSLGGWIDGTFDGQTVFLAGAVLAIVWLAVASTMKEPP
+ YVSSLRVEIPADIVADDRLKQRLLSMKGVSEALIVAEEHSAYVKIDSKVTNRFEVEQL
+ ISKG"
+ misc_feature 2423282..2424397
+ /locus_tag="SARI_02498"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature 2423291..2424307
+ /locus_tag="SARI_02498"
+ /note="Major Facilitator Superfamily; Region: MFS_1;
+ pfam07690"
+ /db_xref="CDD:219516"
+ misc_feature order(2423324..2423326,2423333..2423341,2423345..2423350,
+ 2423402..2423404,2423411..2423416,2423423..2423425,
+ 2423435..2423440,2423444..2423449,2423579..2423584,
+ 2423591..2423596,2423603..2423608,2423615..2423617,
+ 2423651..2423656,2423663..2423668,2423684..2423686,
+ 2423915..2423917,2423924..2423929,2423936..2423941,
+ 2423948..2423950,2423990..2423992,2424002..2424004,
+ 2424014..2424016,2424023..2424025,2424035..2424037,
+ 2424179..2424181,2424188..2424193,2424200..2424202,
+ 2424212..2424217,2424224..2424226,2424257..2424262,
+ 2424269..2424274,2424281..2424286,2424293..2424295)
+ /locus_tag="SARI_02498"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ unsure 2424633..2424646
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(2424654..2425163)
+ /locus_tag="SARI_02499"
+ CDS complement(2424654..2425163)
+ /locus_tag="SARI_02499"
+ /inference="protein motif:HMMPfam:IPR007551"
+ /inference="similar to AA sequence:SwissProt:Q8ZRC9"
+ /note="putative nucleotide binding property based on
+ structural studies of Haemophilus influenzae crystallized
+ protein in PDB Accession Number 1IN0 and NMR studies of
+ Escherichia coli YajQ; the YajQ protein from Pseudomonas
+ synringae appears to play a role in activation of
+ bateriophage phi6 segment L transcription"
+ /codon_start=1
+ /transl_table=11
+ /product="putative nucleotide-binding protein"
+ /protein_id="YP_001571500.1"
+ /db_xref="GI:161504388"
+ /db_xref="InterPro:IPR007551"
+ /translation="MKGEEKMPSFDIVSEVDLHEARNGVDNAVREVESRFDFRGVEAT
+ IELNDANKTIKVLSESDFQVNQLLDILRAKLLKRGIEGASLDVPAEFVHSGKTWFVEA
+ KLKQGIESAVQKKIVKLIKDSKLKVQAQIQGEEIRVTGKSRDDLQSVMALVRGGDLGQ
+ PFQFKNFRD"
+ misc_feature complement(2424657..2425154)
+ /locus_tag="SARI_02499"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG1666"
+ /db_xref="CDD:224580"
+ misc_feature complement(2424660..2425142)
+ /locus_tag="SARI_02499"
+ /note="Proteins similar to Escherichia coli YajQ; Region:
+ YajQ_like; cd11740"
+ /db_xref="CDD:213038"
+ gene 2425271..2426182
+ /locus_tag="SARI_02500"
+ CDS 2425271..2426182
+ /locus_tag="SARI_02500"
+ /inference="protein motif:HMMPfam:IPR013332"
+ /inference="protein motif:HMMPfam:IPR013752"
+ /inference="protein motif:HMMTigr:IPR003710"
+ /inference="protein motif:superfamily:IPR008927"
+ /inference="similar to AA sequence:SwissProt:P37402"
+ /note="ketopantoate reductase; catalyzes the NADPH
+ reduction of ketopantoate to pantoate; functions in
+ pantothenate (vitamin B5) biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="2-dehydropantoate 2-reductase"
+ /protein_id="YP_001571501.1"
+ /db_xref="GI:161504389"
+ /db_xref="InterPro:IPR003710"
+ /db_xref="InterPro:IPR008927"
+ /db_xref="InterPro:IPR013332"
+ /db_xref="InterPro:IPR013752"
+ /translation="MKITVLGCGALGQLWLTALCKHGHDVQGWLRVPQPYCSVNLIDT
+ DGSFFNESLTANDPDFLAKSELLLVTLKAWQVSDAVRTLASTLPVTSPILLIHNGMGT
+ IEELQNIQQPMLMGTITHAARRDGNIIIHVANGTTHIGPAREQDGDYSYLAEILQGVL
+ PDVAWHNNIRAEMWRKLAVNCVINPLTALWNCPNGALRHHPDEINALCEEVAAVIERE
+ GYHTSADNLRYYVEQVIDSTAENISSMLQDVRAMRHTEIDYITGYLLKRARVHGLAVP
+ ENSRLFEMVKRKESEYERSGTGMPRPW"
+ misc_feature 2425271..2426152
+ /locus_tag="SARI_02500"
+ /note="2-dehydropantoate 2-reductase; Reviewed; Region:
+ PRK06522"
+ /db_xref="CDD:235821"
+ misc_feature 2425277..2425702
+ /locus_tag="SARI_02500"
+ /note="Ketopantoate reductase PanE/ApbA; Region: ApbA;
+ pfam02558"
+ /db_xref="CDD:217105"
+ misc_feature 2425772..2426137
+ /locus_tag="SARI_02500"
+ /note="Ketopantoate reductase PanE/ApbA C terminal;
+ Region: ApbA_C; pfam08546"
+ /db_xref="CDD:219895"
+ gene 2426145..2426735
+ /locus_tag="SARI_02501"
+ CDS 2426145..2426735
+ /locus_tag="SARI_02501"
+ /inference="protein motif:HMMPfam:IPR002818"
+ /inference="protein motif:HMMTigr:IPR006287"
+ /inference="similar to AA sequence:INSD:AAO70020.1"
+ /note="'KEGG: eci:UTI89_C0447 2.6e-94 THIJ;
+ 4-methyl-5(B-hydroxyethyl)-THIazole monophosphate
+ biosynthesis enzyme K03152;
+ COG: COG0693 Putative intracellular protease/amidase;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="DJ-1 family protein"
+ /protein_id="YP_001571502.1"
+ /db_xref="GI:161504390"
+ /db_xref="InterPro:IPR002818"
+ /db_xref="InterPro:IPR006287"
+ /translation="MSAQALVCLAPGSEETEAVTTIDLLVRGGINVTTASVASDGSLT
+ IVCSRGVKLLADAPLVEVADGNYDIIVLPGGIKGAECFRDSPLLVETVKQFHRSGRIV
+ AAICAAAATVLVPHDIFPIGNMTGFPALKDKIPAGQWQDKRVVWDARVKLLTSQGPGT
+ AIDFGLKIIDLLVGREKAHEVASQLVMAAGIYNYYE"
+ misc_feature 2426145..2426732
+ /locus_tag="SARI_02501"
+ /note="oxidative-stress-resistance chaperone; Provisional;
+ Region: PRK11574"
+ /db_xref="CDD:183210"
+ misc_feature 2426157..2426660
+ /locus_tag="SARI_02501"
+ /note="Type 1 glutamine amidotransferase (GATase1)-like
+ domain found in Human DJ-1; Region: GATase1_DJ-1; cd03135"
+ /db_xref="CDD:153229"
+ misc_feature 2426463..2426465
+ /locus_tag="SARI_02501"
+ /note="conserved cys residue [active]"
+ /db_xref="CDD:153229"
+ gene complement(2426830..2428278)
+ /locus_tag="SARI_02502"
+ CDS complement(2426830..2428278)
+ /locus_tag="SARI_02502"
+ /inference="protein motif:HMMPfam:IPR003720"
+ /inference="protein motif:HMMPfam:IPR004114"
+ /inference="protein motif:HMMTigr:IPR003720"
+ /inference="protein motif:superfamily:IPR008994"
+ /inference="protein motif:superfamily:IPR009079"
+ /inference="similar to AA sequence:REFSEQ:YP_151495.1"
+ /note="Required for the synthesis of the thiazole moiety"
+ /codon_start=1
+ /transl_table=11
+ /product="thiamine biosynthesis protein ThiI"
+ /protein_id="YP_001571503.1"
+ /db_xref="GI:161504391"
+ /db_xref="InterPro:IPR003720"
+ /db_xref="InterPro:IPR004114"
+ /db_xref="InterPro:IPR008994"
+ /db_xref="InterPro:IPR009079"
+ /translation="MKFIIKLFPEITIKSQSVRLRFIKILAGNIRNVLKHYDETLAVV
+ RHWDNIEVRAKDENQRLAIRDALTRIPGIHHILEVEDVPFTDMHDIFEKALAQYREQL
+ EGKTFCVRVKRRGKHEFSSIEVERYVGGGLNQHIESARVKLANPDVTVHLEVEDDRLL
+ LIKGRYEGIGGFPIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEI
+ GVRQVAHYLWNRFGSSHRVRFVAINFEPVVGEILEKVDDGQMGVVLKRMMVRAASKVA
+ ERYGVQALVTGEALGQVSSQTLTNLRLIDNVSDTLILRPLISYDKEHIINLARQIGTE
+ DFARTMPEYCGVISKSPTVKAIKAKIEAEEENFDFSILDKVVEEANNVDIREIAQQTQ
+ QEVVEVETVSGFGANDVILDIRSIDEQDDKPLKVEGIDVVSLPFYKLSTKFGDLDQSK
+ TWLLWCERGVMSRLQALYLREQGFANVKVYRP"
+ misc_feature complement(2426833..2428278)
+ /locus_tag="SARI_02502"
+ /note="tRNA s(4)U8 sulfurtransferase; Provisional; Region:
+ PRK01269"
+ /db_xref="CDD:234932"
+ misc_feature complement(2427769..2428275)
+ /locus_tag="SARI_02502"
+ /note="THUMP domain of thiamine biosynthesis protein ThiI;
+ Region: THUMP_ThiI; cd11716"
+ /db_xref="CDD:212585"
+ misc_feature complement(2427220..2427741)
+ /locus_tag="SARI_02502"
+ /note="ThiI is required for thiazole synthesis in the
+ thiamine biosynthesis pathway. It belongs to the Adenosine
+ Nucleotide Hydrolysis suoerfamily and predicted to bind to
+ Adenosine nucleotide; Region: ThiI; cd01712"
+ /db_xref="CDD:238845"
+ misc_feature complement(order(2427646..2427648,2427652..2427654,
+ 2427709..2427720,2427724..2427732))
+ /locus_tag="SARI_02502"
+ /note="Ligand Binding Site [chemical binding]; other site"
+ /db_xref="CDD:238845"
+ misc_feature complement(2426836..2427054)
+ /locus_tag="SARI_02502"
+ /note="Rhodanese Homology Domain (RHOD); an alpha beta
+ fold domain found duplicated in the rhodanese protein. The
+ cysteine containing enzymatically active version of the
+ domain is also found in the Cdc25 class of protein
+ phosphatases and a variety of proteins...; Region: RHOD;
+ cd00158"
+ /db_xref="CDD:238089"
+ misc_feature complement(2426911..2426913)
+ /locus_tag="SARI_02502"
+ /note="active site residue [active]"
+ /db_xref="CDD:238089"
+ gene 2428490..2428732
+ /locus_tag="SARI_02503"
+ CDS 2428490..2428732
+ /locus_tag="SARI_02503"
+ /inference="protein motif:BlastProDom:IPR003761"
+ /inference="protein motif:HMMPfam:IPR003761"
+ /inference="protein motif:HMMTigr:IPR003761"
+ /inference="similar to AA sequence:INSD:AAO70029.1"
+ /note="catalyzes the bidirectional exonucleolytic cleavage
+ of DNA"
+ /codon_start=1
+ /transl_table=11
+ /product="exodeoxyribonuclease VII small subunit"
+ /protein_id="YP_001571504.1"
+ /db_xref="GI:161504392"
+ /db_xref="InterPro:IPR003761"
+ /translation="MPKKNEAPASFETALSELEHIVTRLESGDLPLEDALNEFERGVQ
+ LARQGQAKLQQAEQRVQILLSDNEEASPEPFIADNE"
+ misc_feature 2428490..2428723
+ /locus_tag="SARI_02503"
+ /note="exodeoxyribonuclease VII small subunit;
+ Provisional; Region: PRK00977"
+ /db_xref="CDD:179195"
+ gene 2428733..2429632
+ /locus_tag="SARI_02504"
+ CDS 2428733..2429632
+ /locus_tag="SARI_02504"
+ /inference="protein motif:HMMPfam:IPR000092"
+ /inference="protein motif:ScanRegExp:IPR000092"
+ /inference="protein motif:superfamily:IPR008949"
+ /inference="similar to AA sequence:REFSEQ:YP_151497.1"
+ /note="'KEGG: spt:SPA2300 5.9e-150 ispA;
+ geranyltranstransferase K00795;
+ COG: COG0142 Geranylgeranyl pyrophosphate synthase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="geranyltranstransferase"
+ /protein_id="YP_001571505.1"
+ /db_xref="GI:161504393"
+ /db_xref="InterPro:IPR000092"
+ /db_xref="InterPro:IPR008949"
+ /translation="MDFMQQLQACVSQANQALSRFIAPLPFQNTPVVEAMQYGALLGG
+ KRLRPFLVYATGQMFGVSTATLDVPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCH
+ IKFGEANAILAGDALQTLAFAIISDAPMPEVADRDRIAMIAELANASGIAGMCGGQAL
+ DLAAEGHQISLDALERIHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYAESIGLA
+ FQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARNKAWDLIEDARQSLHQ
+ LAAQSLDTSALEALANYIIQRDK"
+ misc_feature 2428733..2429629
+ /locus_tag="SARI_02504"
+ /note="Geranylgeranyl pyrophosphate synthase [Coenzyme
+ metabolism]; Region: IspA; COG0142"
+ /db_xref="CDD:223220"
+ misc_feature 2428817..2429623
+ /locus_tag="SARI_02504"
+ /note="Trans-Isoprenyl Diphosphate Synthases,
+ head-to-tail; Region: Trans_IPPS_HT; cd00685"
+ /db_xref="CDD:173833"
+ misc_feature order(2428958..2428960,2428967..2428975,2428979..2428987,
+ 2428991..2428996,2429015..2429020,2429204..2429206,
+ 2429213..2429215,2429273..2429278,2429285..2429287,
+ 2429399..2429404,2429411..2429413,2429441..2429443,
+ 2429456..2429458,2429471..2429473)
+ /locus_tag="SARI_02504"
+ /note="substrate binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:173833"
+ misc_feature 2428967..2428996
+ /locus_tag="SARI_02504"
+ /note="chain length determination region; other site"
+ /db_xref="CDD:173833"
+ misc_feature order(2428982..2428987,2428994..2428996,2429015..2429020,
+ 2429213..2429215,2429273..2429275,2429399..2429404,
+ 2429411..2429413,2429441..2429443,2429456..2429458,
+ 2429471..2429473)
+ /locus_tag="SARI_02504"
+ /note="substrate-Mg2+ binding site; other site"
+ /db_xref="CDD:173833"
+ misc_feature order(2428982..2428987,2428994..2428996,2429015..2429020,
+ 2429273..2429275,2429399..2429404)
+ /locus_tag="SARI_02504"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:173833"
+ misc_feature order(2428982..2428987,2428994..2428996,2429015..2429020,
+ 2429213..2429215,2429273..2429275)
+ /locus_tag="SARI_02504"
+ /note="aspartate-rich region 1; other site"
+ /db_xref="CDD:173833"
+ misc_feature order(2429000..2429005,2429012..2429050,2429420..2429425,
+ 2429441..2429458,2429465..2429479)
+ /locus_tag="SARI_02504"
+ /note="active site lid residues [active]"
+ /db_xref="CDD:173833"
+ misc_feature order(2429399..2429404,2429411..2429413,2429441..2429443,
+ 2429456..2429458,2429471..2429473)
+ /locus_tag="SARI_02504"
+ /note="aspartate-rich region 2; other site"
+ /db_xref="CDD:173833"
+ gene 2429656..2431518
+ /locus_tag="SARI_02505"
+ CDS 2429656..2431518
+ /locus_tag="SARI_02505"
+ /inference="protein motif:Gene3D:IPR009014"
+ /inference="protein motif:HMMPfam:IPR005475"
+ /inference="protein motif:HMMPfam:IPR005476"
+ /inference="protein motif:HMMPIR:IPR005477"
+ /inference="protein motif:HMMTigr:IPR005477"
+ /inference="protein motif:ScanRegExp:IPR005474"
+ /inference="protein motif:ScanRegExp:IPR005475"
+ /inference="protein motif:superfamily:IPR009014"
+ /note="catalyzes the formation of 1-deoxy-D-xylulose
+ 5-phosphate from pyruvate and D-glyceraldehyde
+ 3-phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="1-deoxy-D-xylulose-5-phosphate synthase"
+ /protein_id="YP_001571506.1"
+ /db_xref="GI:161504394"
+ /db_xref="InterPro:IPR005474"
+ /db_xref="InterPro:IPR005475"
+ /db_xref="InterPro:IPR005476"
+ /db_xref="InterPro:IPR005477"
+ /db_xref="InterPro:IPR009014"
+ /translation="MSFDIAKYPTLALVDSTQELRLLPKESLPKLCDELRRYLLDSVS
+ RSSGHFASGLGTVELTVALHYVYNTPFDQLIWDVGHQAYPHKILTGRRDKIGTIRQKG
+ GLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKDRRTVCVIGDGAITAGMA
+ FEAMNHAGDIRPDMLVILNDNEMSISENVGALNNHLAQLLSGKLYSSLREGGKKVFSG
+ VPPIKELLKRTEEHIKGMVVPGTLFEELGFNYIGPVDGHDVMGLISTLKNMRDLKGPQ
+ FLHIMTKKGRGYEPAEKDPITFHAVPKFDPSSGCLPKSSGSLPGYSKIFGDWLCETAA
+ KDSKLMAITPAMREGSGMVEFSRKFPDRYFDVAIAEQHAVTFAAGLAIGGYKPVVAIY
+ STFLQRAYDQVIHDIAIQKLPVMFAIDRAGIVGADGQTHQGAFDLSYLRCIPDMVIMT
+ PSDENECRQMLFTGYHYNDGPTAVRYPRGNAQGVALTPLEKLPIGKGIVKRHGEKLAI
+ LNFGTLMPEAAKVAEALNATLVDMRFVKPLDETLILEMAARHEALATLEENAIMGGAG
+ SGVNEVLMAHRKPVPVLNIGLPDFFIPQGTQEEARAELGLDAAGIEAKIKAWLA"
+ misc_feature 2429686..2431515
+ /locus_tag="SARI_02505"
+ /note="1-deoxy-D-xylulose-5-phosphate synthase; Region:
+ dxs; TIGR00204"
+ /db_xref="CDD:129308"
+ misc_feature 2429794..2430519
+ /locus_tag="SARI_02505"
+ /note="Thiamine pyrophosphate (TPP) family, DXS subfamily,
+ TPP-binding module; 1-Deoxy-D-xylulose-5-phosphate
+ synthase (DXS) is a regulatory enzyme of the
+ mevalonate-independent pathway involved in terpenoid
+ biosynthesis. Terpeniods are plant natural products...;
+ Region: TPP_DXS; cd02007"
+ /db_xref="CDD:238965"
+ misc_feature order(2430022..2430024,2430106..2430117,2430196..2430198,
+ 2430202..2430204)
+ /locus_tag="SARI_02505"
+ /note="TPP-binding site; other site"
+ /db_xref="CDD:238965"
+ misc_feature 2430622..2431089
+ /locus_tag="SARI_02505"
+ /note="Pyrimidine (PYR) binding domain of
+ 1-deoxy-D-xylulose-5-phosphate synthase (DXS),
+ transketolase (TK), and related proteins; Region:
+ TPP_PYR_DXS_TK_like; cd07033"
+ /db_xref="CDD:132916"
+ misc_feature order(2430664..2430666,2430670..2430672,2430688..2430690,
+ 2430739..2430741,2430748..2430750,2430754..2430771,
+ 2430778..2430783,2430787..2430795,2430847..2430849,
+ 2430856..2430861,2430934..2430936,2430943..2430945,
+ 2430991..2430996,2431060..2431062)
+ /locus_tag="SARI_02505"
+ /note="PYR/PP interface [polypeptide binding]; other site"
+ /db_xref="CDD:132916"
+ misc_feature order(2430688..2430690,2430748..2430750,2430757..2430765,
+ 2430844..2430849,2430853..2430855,2430934..2430936,
+ 2430940..2430942,2430967..2430972,2430976..2430981,
+ 2430985..2430987)
+ /locus_tag="SARI_02505"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:132916"
+ misc_feature order(2430757..2430759,2430763..2430765,2430838..2430840,
+ 2430847..2430849)
+ /locus_tag="SARI_02505"
+ /note="TPP binding site [chemical binding]; other site"
+ /db_xref="CDD:132916"
+ misc_feature 2431138..2431488
+ /locus_tag="SARI_02505"
+ /note="Transketolase, C-terminal domain; Region:
+ Transketolase_C; pfam02780"
+ /db_xref="CDD:217227"
+ gene complement(2431804..2432319)
+ /locus_tag="SARI_02506"
+ CDS complement(2431804..2432319)
+ /locus_tag="SARI_02506"
+ /inference="protein motif:HMMPfam:IPR007686"
+ /inference="protein motif:superfamily:IPR009072"
+ /inference="similar to AA sequence:INSD:CAD08876.1"
+ /note="hydrolyzes phosphatidylglycerophosphate to produce
+ phosphatidylglycerol and phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphatidylglycerophosphatase A"
+ /protein_id="YP_001571507.1"
+ /db_xref="GI:161504395"
+ /db_xref="InterPro:IPR007686"
+ /db_xref="InterPro:IPR009072"
+ /translation="MTILPRHKDVAKSRLNLRNPWHLLATGFGSGLSPVVPGTMGSLA
+ AIPFWYLMTFLPWQLYSLVVMFGICIGVYLCHQTAKDMGVHDHGSIVWDEFIGMWITL
+ MALPTTAWQWVAAGFIIFRILDMWKPWPIRWFDRNVHGGMGIMIDDIVAGVISAGILY
+ FIGHHWPIGVI"
+ misc_feature complement(2431834..2432259)
+ /locus_tag="SARI_02506"
+ /note="Phosphatidylglycerophosphatase A; a bacterial
+ membrane-associated enzyme involved in lipid metabolism;
+ Region: PgpA; cd06971"
+ /db_xref="CDD:133477"
+ misc_feature complement(order(2431834..2431836,2431945..2431950,
+ 2431954..2431959,2431963..2431971,2431975..2431983,
+ 2432014..2432016,2432023..2432028,2432032..2432037,
+ 2432044..2432052,2432059..2432061,2432107..2432112,
+ 2432122..2432127,2432134..2432136,2432182..2432184,
+ 2432248..2432250))
+ /locus_tag="SARI_02506"
+ /note="tetramer interfaces [polypeptide binding]; other
+ site"
+ /db_xref="CDD:133477"
+ misc_feature complement(order(2431876..2431881,2431888..2431890,
+ 2432038..2432043,2432050..2432052))
+ /locus_tag="SARI_02506"
+ /note="binuclear metal-binding site [ion binding]; other
+ site"
+ /db_xref="CDD:133477"
+ gene complement(2432297..2433274)
+ /locus_tag="SARI_02507"
+ CDS complement(2432297..2433274)
+ /locus_tag="SARI_02507"
+ /inference="protein motif:HMMPfam:IPR010918"
+ /inference="protein motif:HMMPIR:IPR006283"
+ /inference="protein motif:HMMTigr:IPR006283"
+ /inference="similar to AA sequence:SwissProt:P55881"
+ /note="catalyzes the formation of thiamine diphosphate
+ from thiamine phosphate ant ATP"
+ /codon_start=1
+ /transl_table=11
+ /product="thiamine monophosphate kinase"
+ /protein_id="YP_001571508.1"
+ /db_xref="GI:161504396"
+ /db_xref="InterPro:IPR006283"
+ /db_xref="InterPro:IPR010918"
+ /translation="MACGEFSLIARYFDRVRSTRLDVETGIGDDCALLNIPEKQTLAI
+ STDTLVAGNHFLPDIDPADLAYKALAVNLSDLAAMGADPAWLTLAITLPEVDEPWLEA
+ FSDSLFELLNYYDMQLIGGDTTRGPLSMTLGIHGYIPAGRALKRAGAKPGDWIYITGT
+ PGDSAAGLAVLQNRLLVSEETDAHYFIKRHLRPTPRILHGQALRDIASAAIDISDGLI
+ SDLGHIVKASGCGAKVDVDALPKSAAMMRHVDAGQALRWTLSGGEDYELCFTVPELNR
+ GALDVAIGQLGVPFTCIGQMSADVEGLSFVRDGMPVTFDWKGYDHFATP"
+ misc_feature complement(2432309..2433274)
+ /locus_tag="SARI_02507"
+ /note="thiamine monophosphate kinase; Provisional; Region:
+ PRK05731"
+ /db_xref="CDD:235583"
+ misc_feature complement(2432387..2433265)
+ /locus_tag="SARI_02507"
+ /note="ThiL (Thiamine-monophosphate kinase) plays a dual
+ role in de novo biosynthesis and in salvage of exogenous
+ thiamine. Thiamine salvage occurs in two steps, with
+ thiamine kinase catalyzing the formation of thiamine
+ phosphate, and ThiL catalyzing the...; Region: ThiL;
+ cd02194"
+ /db_xref="CDD:100030"
+ misc_feature complement(order(2432630..2432635,2432639..2432641,
+ 2432837..2432839,2432909..2432917,2432963..2432965,
+ 2433011..2433013,2433050..2433052,2433185..2433193,
+ 2433248..2433250))
+ /locus_tag="SARI_02507"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:100030"
+ misc_feature complement(order(2432876..2432878,2432882..2432884,
+ 2432900..2432911,2432918..2432920,2432963..2432965,
+ 2433125..2433127,2433131..2433139,2433182..2433184,
+ 2433239..2433241))
+ /locus_tag="SARI_02507"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:100030"
+ gene complement(2433353..2433772)
+ /gene="nusB"
+ /locus_tag="SARI_02508"
+ CDS complement(2433353..2433772)
+ /gene="nusB"
+ /locus_tag="SARI_02508"
+ /inference="protein motif:Gene3D:IPR006027"
+ /inference="protein motif:HMMPfam:IPR006027"
+ /inference="protein motif:HMMTigr:IPR011605"
+ /inference="similar to AA sequence:SwissProt:Q5PFS9"
+ /note="Regulates rRNA biosynthesis by transcriptional
+ antitermination"
+ /codon_start=1
+ /transl_table=11
+ /product="transcription antitermination protein NusB"
+ /protein_id="YP_001571509.1"
+ /db_xref="GI:161504397"
+ /db_xref="InterPro:IPR006027"
+ /db_xref="InterPro:IPR011605"
+ /translation="MKPAARRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVD
+ VLYFRELLSGVATNSAYLDGLMKPYLSRLLEELGQVEKAVLRIALFELSKRSDVPYKV
+ AINEAIELAKTFGAEDSHKFVNGVLDKAAPVIRPNKK"
+ misc_feature complement(2433371..2433757)
+ /gene="nusB"
+ /locus_tag="SARI_02508"
+ /note="Transcription termination factor NusB (N
+ protein-Utilization Substance B). NusB plays a key role in
+ the regulation of ribosomal RNA biosynthesis in eubacteria
+ by modulating the efficiency of transcriptional
+ antitermination. NusB along with other Nus...; Region:
+ Terminator_NusB; cd00619"
+ /db_xref="CDD:238342"
+ misc_feature complement(order(2433743..2433745,2433755..2433757))
+ /gene="nusB"
+ /locus_tag="SARI_02508"
+ /note="putative RNA binding site [nucleotide binding];
+ other site"
+ /db_xref="CDD:238342"
+ gene complement(2433793..2434314)
+ /gene="ribH"
+ /locus_tag="SARI_02509"
+ CDS complement(2433793..2434314)
+ /gene="ribH"
+ /locus_tag="SARI_02509"
+ /inference="protein motif:BlastProDom:IPR002180"
+ /inference="protein motif:Gene3D:IPR002180"
+ /inference="protein motif:HMMPfam:IPR002180"
+ /inference="protein motif:HMMTigr:IPR002180"
+ /inference="protein motif:superfamily:IPR002180"
+ /inference="similar to AA sequence:INSD:AAO70036.1"
+ /note="'RibE; 6,7-diimethyl-8-ribityllumazine synthase;
+ DMRL synthase; lumazine synthase; beta subunit of
+ riboflavin synthase; condenses
+ 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione
+ with L-3,4-dihydrohy-2-butanone-4-phosphate to generate
+ 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then
+ uses 2 molecules of DMRL to produce riboflavin (vitamin
+ B12); involved in the last steps of riboflavin
+ biosynthesis; forms a 60mer (icosahedral shell) in both
+ Bacillus subtilis and Escherichia coli; in Bacillus
+ subtilis this 60mer is associated with the riboflavin
+ synthase subunit (alpha) while in Escherichia coli it is
+ not'"
+ /codon_start=1
+ /transl_table=11
+ /product="6,7-dimethyl-8-ribityllumazine synthase"
+ /protein_id="YP_001571510.1"
+ /db_xref="GI:161504398"
+ /db_xref="InterPro:IPR002180"
+ /translation="MIKSAPLRGQMNPGRENMNIIKANVAAPDARVAITIARFNQFIN
+ DSLLDGAVDALTRIGQVKDDNITVVWVPGAYELPLATDALAKSGKYDAVIALGTVIRG
+ GTAHFEYVAGGASNGLANVAQDSGVPVAFGVLTTESIEQAIERAGTKAGNKGAEAALT
+ ALEMINVLKAIKA"
+ misc_feature complement(2433820..2434221)
+ /gene="ribH"
+ /locus_tag="SARI_02509"
+ /note="lumazine synthase (6,7-dimethyl-8-ribityllumazine
+ synthase, LS), catalyzes the penultimate step in the
+ biosynthesis of riboflavin (vitamin B2); type-I; Region:
+ Lumazine_synthase-I; cd09209"
+ /db_xref="CDD:187742"
+ misc_feature complement(order(2433823..2433828,2433835..2433837,
+ 2433847..2433849,2433856..2433858,2433880..2433882,
+ 2433892..2433894,2433904..2433906,2433910..2433912,
+ 2433916..2433918,2433922..2433924,2433934..2433939,
+ 2433946..2433960,2433964..2433972,2433976..2433984,
+ 2433988..2433993,2433997..2433999,2434003..2434008,
+ 2434012..2434014,2434045..2434047,2434057..2434059,
+ 2434063..2434071,2434075..2434083,2434087..2434092,
+ 2434099..2434110,2434198..2434200,2434216..2434218))
+ /gene="ribH"
+ /locus_tag="SARI_02509"
+ /note="homopentamer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:187742"
+ misc_feature complement(order(2433847..2433849,2433856..2433858,
+ 2433880..2433882,2433913..2433927,2433994..2433999,
+ 2434003..2434005,2434009..2434026,2434087..2434098,
+ 2434195..2434200))
+ /gene="ribH"
+ /locus_tag="SARI_02509"
+ /note="active site"
+ /db_xref="CDD:187742"
+ gene complement(2434352..2435455)
+ /gene="ribD"
+ /locus_tag="SARI_02510"
+ CDS complement(2434352..2435455)
+ /gene="ribD"
+ /locus_tag="SARI_02510"
+ /inference="protein motif:HMMPfam:IPR002125"
+ /inference="protein motif:HMMPfam:IPR002734"
+ /inference="protein motif:HMMTigr:IPR004794"
+ /inference="protein motif:HMMTigr:IPR011549"
+ /inference="protein motif:ScanRegExp:IPR002125"
+ /inference="similar to AA sequence:REFSEQ:YP_151504.1"
+ /note="'riboflavin biosynthesis protein which catalyzes
+ the deamination and reduction steps in the riboflavin
+ biosynthesis pathway; catalyzes the formation of
+ 5-amino-6-(5-phosphoribosylamino)uracil from
+ 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine
+ and the formation of
+ 5-amino-6-(5-phosphoribosylamino)uracil from
+ 5-amino-6-(5-phosphoribitylamino)uracil'"
+ /codon_start=1
+ /transl_table=11
+ /product="bifunctional
+ diaminohydroxyphosphoribosylaminopyrimidine
+ deaminase/5-amino-6-(5-phosphoribosylamino)uracil
+ reductase"
+ /protein_id="YP_001571511.1"
+ /db_xref="GI:161504399"
+ /db_xref="InterPro:IPR002125"
+ /db_xref="InterPro:IPR002734"
+ /db_xref="InterPro:IPR004794"
+ /db_xref="InterPro:IPR011549"
+ /translation="MQDEFYMARALKLAQRGRFTTHPNPDVGCVIVNNGEIVGEGYHQ
+ RAGEPHAEVHALRMAGAKAKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQD
+ PNPQVAGCGLYRLQQAGIAVSHGLMMSEAEALNKGFLKRMRTGFPYLQLKLGASVDGR
+ TAMASGESQWITSPQARRDVQRLRAQSHAILTSSATVLADDPALTVRWAELDASTQAS
+ YPQENLRQPVRIVIDSQNRVTPAHRIVQQPGETWIARTQEDSRAWPDSVRTISVPAHN
+ GHLDLVVLMMQLGRQQINSIWVEAGPGLAGALLQAGLVDELIVYVAPKLLGTQARGLC
+ ELPGLEKLADAPQFTFSEIRHVGPDVCLHMVSA"
+ misc_feature complement(2434355..2435455)
+ /gene="ribD"
+ /locus_tag="SARI_02510"
+ /note="bifunctional
+ diaminohydroxyphosphoribosylaminopyrimidine
+ deaminase/5-amino-6-(5-phosphoribosylamino)uracil
+ reductase; Provisional; Region: ribD; PRK10786"
+ /db_xref="CDD:182729"
+ misc_feature complement(2435099..2435437)
+ /gene="ribD"
+ /locus_tag="SARI_02510"
+ /note="Riboflavin-specific deaminase. Riboflavin
+ biosynthesis protein RibD
+ (Diaminohydroxyphosphoribosylaminopyrimidine deaminase)
+ catalyzes the deamination of
+ 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone
+ 5'-phosphate, which is an intermediate step in
+ the...; Region: Riboflavin_deaminase-reductase; cd01284"
+ /db_xref="CDD:238611"
+ misc_feature complement(order(2435204..2435206,2435231..2435236,
+ 2435300..2435308))
+ /gene="ribD"
+ /locus_tag="SARI_02510"
+ /note="catalytic motif [active]"
+ /db_xref="CDD:238611"
+ misc_feature complement(order(2435204..2435206,2435231..2435233,
+ 2435300..2435302,2435306..2435308))
+ /gene="ribD"
+ /locus_tag="SARI_02510"
+ /note="Zn binding site [ion binding]; other site"
+ /db_xref="CDD:238611"
+ misc_feature complement(2434367..2435023)
+ /gene="ribD"
+ /locus_tag="SARI_02510"
+ /note="riboflavin-specific deaminase C-terminal domain;
+ Region: ribD_Cterm; TIGR00227"
+ /db_xref="CDD:129330"
+ gene complement(2435459..2435908)
+ /locus_tag="SARI_02511"
+ CDS complement(2435459..2435908)
+ /locus_tag="SARI_02511"
+ /inference="protein motif:HMMPfam:IPR005144"
+ /inference="similar to AA sequence:INSD:AAV78193.1"
+ /note="'KEGG: eci:UTI89_C0435 1.6e-46 ybaD; hypothetical
+ protein K07738;
+ COG: COG1327 Predicted transcriptional regulator, consists
+ of a Zn-ribbon and ATP-cone domains;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571512.2"
+ /db_xref="GI:448236262"
+ /db_xref="InterPro:IPR005144"
+ /translation="MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVA
+ ELVMPRVIKSNDVREPFNEDKLRSGMLRALEKRPVSADDVEMALNHIKSKLRATGERE
+ VPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKDFGEEIARLQD"
+ misc_feature complement(2435465..2435908)
+ /locus_tag="SARI_02511"
+ /note="transcriptional regulator NrdR; Validated; Region:
+ nrdR; PRK00464"
+ /db_xref="CDD:234774"
+ misc_feature complement(2435498..2435764)
+ /locus_tag="SARI_02511"
+ /note="ATP cone domain; Region: ATP-cone; pfam03477"
+ /db_xref="CDD:217585"
+ gene 2436042..2436599
+ /locus_tag="SARI_02512"
+ CDS 2436042..2436599
+ /locus_tag="SARI_02512"
+ /inference="similar to AA sequence:INSD:CAD08870.1"
+ /note="'COG: NOG07872 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571513.1"
+ /db_xref="GI:161504401"
+ /translation="MKEIIDMTRRYLRVILAGSLLSLTACAPQSEVRQMHQSISTLNK
+ EMNQLNQETVKITQQNKLNVDSTRGVYLLPGANTPARLKSQIGTLRMTLLDIAPVADG
+ THAMLRIQGESRDPLPAFSATVEYGQIQGTTENYQEVDVQRLLVNAPASLLAPSDVNI
+ PLQLKSITPERLGFIRIHDIQPVNQ"
+ misc_feature 2436060..2436596
+ /locus_tag="SARI_02512"
+ /note="hypothetical protein; Provisional; Region:
+ PRK11530"
+ /db_xref="CDD:236923"
+ unsure 2436057..2436068
+ /locus_tag="SARI_02512"
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(2436555..2436695)
+ /locus_tag="SARI_02513"
+ CDS complement(2436555..2436695)
+ /locus_tag="SARI_02513"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571514.1"
+ /db_xref="GI:161504402"
+ /translation="MPIHARNDENVKRATKVAQGMLRSAQNAPPERSLINRLDIVDAN
+ KT"
+ gene complement(2436673..2436801)
+ /locus_tag="SARI_02514"
+ CDS complement(2436673..2436801)
+ /locus_tag="SARI_02514"
+ /note="'Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571515.1"
+ /db_xref="GI:161504403"
+ /translation="MLTKICVVSHIYHLRNRLRSRLRILGMAIVLAFMNIANPCQK"
+ gene 2436899..2437762
+ /locus_tag="SARI_02515"
+ CDS 2436899..2437762
+ /locus_tag="SARI_02515"
+ /inference="protein motif:FPrintScan:IPR003055"
+ /inference="protein motif:HMMPfam:IPR003055"
+ /inference="similar to AA sequence:INSD:AAO70040.1"
+ /note="'COG: COG3248 Nucleoside-binding outer membrane
+ protein;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571516.1"
+ /db_xref="GI:161504404"
+ /db_xref="InterPro:IPR003055"
+ /translation="MKKTLLAVSAALALTSSFTVNAAENDQPQYLSDWWHQSVNVVGS
+ YHTRFSPKLNNDVYLEYEAFAKKDWFDFYGYIDIPKTFGWGNGNDKGAWDDGSPMFME
+ IEPRFSIDKLTGVNLGFGPFKEWYFANNYIYDMGDNKASRQSTWYMGLGTDIDTGLPM
+ GLSLNVYAKYQWQNYGASNENEWDGYRFKVKYFVPITDLWGGKLSYIGFTNFDWGSDL
+ GDDSNRTSNSIASSHILALNYDHWHYSVVARYFHNGGQWQNGAKLNWGDGDFSAKSTG
+ WGGYLVVGYNF"
+ misc_feature 2436959..2437759
+ /locus_tag="SARI_02515"
+ /note="nucleoside-specific channel-forming protein Tsx;
+ Provisional; Region: PRK15106"
+ /db_xref="CDD:237911"
+ gene complement(2437841..2438188)
+ /locus_tag="SARI_02516"
+ CDS complement(2437841..2438188)
+ /locus_tag="SARI_02516"
+ /inference="protein motif:HMMPfam:IPR002711"
+ /inference="protein motif:HMMSmart:IPR003615"
+ /inference="similar to AA sequence:INSD:AAL19365.1"
+ /note="'COG: NOG13275 non supervised orthologous group;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571517.1"
+ /db_xref="GI:161504405"
+ /db_xref="InterPro:IPR002711"
+ /db_xref="InterPro:IPR003615"
+ /translation="MAIIPKNYARLESGYREKALKLFPWVCGRCSREFVYSNLRELTV
+ HHIDHDHTNNPEDGSNWELLCLYCHDHEHSKYTEADQYGSTVIAGEDAQKDVGEATYN
+ PFADLKAMMNKKK"
+ misc_feature complement(2437970..2438137)
+ /locus_tag="SARI_02516"
+ /note="HNH nucleases; HNH endonuclease signature which is
+ found in viral, prokaryotic, and eukaryotic proteins. The
+ alignment includes members of the large group of homing
+ endonucleases, yeast intron 1 protein, MutS, as well as
+ bacterial colicins, pyocins, and...; Region: HNHc;
+ cd00085"
+ /db_xref="CDD:238038"
+ misc_feature complement(order(2437970..2437972,2437982..2437984,
+ 2437991..2437996,2438006..2438011,2438042..2438044,
+ 2438048..2438056,2438060..2438062))
+ /locus_tag="SARI_02516"
+ /note="active site"
+ /db_xref="CDD:238038"
+ gene complement(2438356..2439372)
+ /gene="secF"
+ /locus_tag="SARI_02517"
+ CDS complement(2438356..2439372)
+ /gene="secF"
+ /locus_tag="SARI_02517"
+ /inference="protein motif:HMMPfam:IPR003335"
+ /inference="protein motif:HMMTigr:IPR003335"
+ /inference="protein motif:HMMTigr:IPR005665"
+ /inference="similar to AA sequence:INSD:ABI99868.1"
+ /note="'forms a complex with SecD and YajC; SecDFyajC
+ stimulates the proton motive force-driven protein
+ translocation; seems to modulate the cycling of SecA by
+ stabilizing its membrane-inserted state and appears to be
+ required for the release of mature proteins from the
+ extracytoplasmic side of the membrane; in some organisms,
+ such as Bacillus subtilis, SecD is fused to SecF'"
+ /codon_start=1
+ /transl_table=11
+ /product="preprotein translocase subunit SecF"
+ /protein_id="YP_001571518.1"
+ /db_xref="GI:161504406"
+ /db_xref="InterPro:IPR003335"
+ /db_xref="InterPro:IPR005665"
+ /translation="MAASASLSCQFEECDVAQEYTVEQLNHGRKVYDFMRWDFWAFGI
+ SGLLLIAAIVIMGVRGFNWGLDFTGGTVIEITLEKPAEMDVMREALQKAGFEEPQLQN
+ FGSSHDIMVRMPPTEGETGGQVLGSKVVTIINEATNQNAAVKRIEFVGPSVGADLAQT
+ GAMALLVALISILVYVGFRFEWRLAAGVVIALAHDVIITLGILSLFHIEIDLTIVASL
+ MSVIGYSLNDSIVVSDRIRENFRKIRRGTPYEIFNVSLTQTLHRTLITSGTTLVVILM
+ LYLFGGPVLEGFSLTMLIGVSIGTASSIYVASALALKLGMKREHMLQQKVEKEGADQP
+ SILP"
+ misc_feature complement(2438410..2439288)
+ /gene="secF"
+ /locus_tag="SARI_02517"
+ /note="preprotein translocase subunit SecF; Reviewed;
+ Region: secF; PRK13022"
+ /db_xref="CDD:237275"
+ misc_feature complement(2439130..2439210)
+ /gene="secF"
+ /locus_tag="SARI_02517"
+ /note="SecD/SecF GG Motif; Region: Sec_GG; pfam07549"
+ /db_xref="CDD:219463"
+ misc_feature complement(2438422..2438988)
+ /gene="secF"
+ /locus_tag="SARI_02517"
+ /note="Protein export membrane protein; Region: SecD_SecF;
+ pfam02355"
+ /db_xref="CDD:216990"
+ gene complement(2439338..2441152)
+ /gene="secD"
+ /locus_tag="SARI_02518"
+ CDS complement(2439338..2441152)
+ /gene="secD"
+ /locus_tag="SARI_02518"
+ /inference="protein motif:HMMPfam:IPR003335"
+ /inference="protein motif:HMMTigr:IPR003335"
+ /inference="protein motif:HMMTigr:IPR005791"
+ /inference="similar to AA sequence:INSD:CAD08863.1"
+ /note="'part of the preprotein secretory system; when
+ complexed with proteins SecF and YajC, SecDFyajC
+ stimulates the proton motive force-driven protein
+ translocation, and appears to be required for the release
+ of mature proteins from the extracytoplasmic side of the
+ membrane'"
+ /codon_start=1
+ /transl_table=11
+ /product="preprotein translocase subunit SecD"
+ /protein_id="YP_001571519.1"
+ /db_xref="GI:161504407"
+ /db_xref="InterPro:IPR003335"
+ /db_xref="InterPro:IPR005791"
+ /translation="MLVVVIIVGLLYALPNLYGEDPAVQITGVRGVAASEQTLIQVQK
+ TLQEEKIPAKSVALEEGAILARFDSTDTQLRAREALVSVLGDKYVVALNLAPATPRWL
+ AAIHADPMKLGLDLRGGVHFLMEVDMDTALGKLQEQNIDSLRSDLREEGIPYTTVRKE
+ DNYGLSITFRDSKARDEAITYLTPRHRDLVISSQGGNALRAVMTDARLSEAREYAVQQ
+ NINILRNRVNQLGVAEPVVQRQGADRIVVELPGIQDTARAKEILGATATLEFRLVNTN
+ VDQAAAAAGRVPGDSEVKQTREGQPVVLYKRVILTGDHITDSTSSQDEYNQPQVNISL
+ DSAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAVLVKQEEVINIANIQSRLG
+ NSFRITGISNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNIKQGLEACLAGL
+ VVSILFMIFFYKKFGLIATSALVANLVLIVGIMSLLPGATLSMPGIAGIVLTLAVAVD
+ ANVLINERIKEELSNGRTVQQAINEGYAGAFSSIFDANITTLIKVIILYAVGTGAIKG
+ FAITTGIGVATSMFTAIIGTRAIVNLLYGGKRVTKLSI"
+ misc_feature complement(2440877..2441152)
+ /gene="secD"
+ /locus_tag="SARI_02518"
+ /note="SecD export protein N-terminal TM region; Region:
+ SecD-TM1; pfam13721"
+ /db_xref="CDD:222341"
+ misc_feature complement(2439341..2440876)
+ /gene="secD"
+ /locus_tag="SARI_02518"
+ /note="preprotein translocase subunit SecD; Reviewed;
+ Region: secD; PRK05812"
+ /db_xref="CDD:235615"
+ misc_feature complement(2440757..2440828)
+ /gene="secD"
+ /locus_tag="SARI_02518"
+ /note="SecD/SecF GG Motif; Region: Sec_GG; pfam07549"
+ /db_xref="CDD:219463"
+ misc_feature complement(2439404..2439889)
+ /gene="secD"
+ /locus_tag="SARI_02518"
+ /note="protein-export membrane protein, SecD/SecF family;
+ Region: 2A0604s01; TIGR00916"
+ /db_xref="CDD:233183"
+ gene complement(2441213..2441545)
+ /gene="yajC"
+ /locus_tag="SARI_02519"
+ CDS complement(2441213..2441545)
+ /gene="yajC"
+ /locus_tag="SARI_02519"
+ /inference="protein motif:BlastProDom:IPR003849"
+ /inference="protein motif:HMMPfam:IPR003849"
+ /inference="protein motif:HMMTigr:IPR003849"
+ /inference="similar to AA sequence:INSD:"
+ /note="member of preprotein translocase; forms a
+ heterotrimer with SecD and SecF; links the
+ SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG
+ complex"
+ /codon_start=1
+ /transl_table=11
+ /product="preprotein translocase subunit YajC"
+ /protein_id="YP_001571520.1"
+ /db_xref="GI:161504408"
+ /db_xref="InterPro:IPR003849"
+ /translation="MSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQK
+ RTKEHKKLMDSIAKGDEVLTNGGLVGRVTKVAESGYIAIALNDTTEVVIKRDFVAAVL
+ PKGTMKAL"
+ misc_feature complement(2441216..2441539)
+ /gene="yajC"
+ /locus_tag="SARI_02519"
+ /note="preprotein translocase subunit YajC; Validated;
+ Region: yajC; PRK05585"
+ /db_xref="CDD:235518"
+ gene complement(2441568..2442695)
+ /gene="tgt"
+ /locus_tag="SARI_02520"
+ CDS complement(2441568..2442695)
+ /gene="tgt"
+ /locus_tag="SARI_02520"
+ /inference="protein motif:Gene3D:IPR002616"
+ /inference="protein motif:HMMPanther:IPR002616"
+ /inference="protein motif:HMMPfam:IPR002616"
+ /inference="protein motif:HMMTigr:IPR002616"
+ /inference="protein motif:HMMTigr:IPR004803"
+ /inference="similar to AA sequence:SwissProt:Q8ZRD8"
+ /note="'Exchanges the guanine residue with
+ 7-aminomethyl-7-deazaguanine in tRNAs with GU(N)
+ anticodons (tRNA-Asp, -Asn, -His and -Tyr)'"
+ /codon_start=1
+ /transl_table=11
+ /product="queuine tRNA-ribosyltransferase"
+ /protein_id="YP_001571521.1"
+ /db_xref="GI:161504409"
+ /db_xref="InterPro:IPR002616"
+ /db_xref="InterPro:IPR004803"
+ /translation="MKFELDTTDGRARRGRLVFERGVVETPAFMPVGTYGTVKGMTPE
+ EVEATGAQIILGNTFHLWLRPGQEIMKLHGDLHDFMQWKGPILTDSGGFQVFSLGDIR
+ KITEQGVHFRNPINGDPIFLDPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKCSME
+ MSLRWAKRSRDRFDGLGNKNALFGIIQGSVYEDLRDISVKGLVEIGFDGYAVGGLAVG
+ EPKADMHRILEHVCPQIPADKPRYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGH
+ LFVTDGVVKIRNAKHKSDTSPLDAECDCYTCRNYSRAYLHHLDRCNEILGARLNTIHN
+ LRYYQRLMAGLRKAIEEGKLESFVTEFYQRQGRPVPPLNVD"
+ misc_feature complement(2441604..2442695)
+ /gene="tgt"
+ /locus_tag="SARI_02520"
+ /note="queuine tRNA-ribosyltransferase; Provisional;
+ Region: tgt; PRK00112"
+ /db_xref="CDD:234642"
+ misc_feature complement(2441586..2442689)
+ /gene="tgt"
+ /locus_tag="SARI_02520"
+ /note="tRNA-guanine family transglycosylase; Region:
+ tgt_general; TIGR00449"
+ /db_xref="CDD:129541"
+ gene complement(2442749..2443819)
+ /gene="queA"
+ /locus_tag="SARI_02521"
+ CDS complement(2442749..2443819)
+ /gene="queA"
+ /locus_tag="SARI_02521"
+ /inference="protein motif:HMMPfam:IPR003699"
+ /inference="protein motif:HMMTigr:IPR003699"
+ /inference="similar to AA sequence:REFSEQ:NP_459399.1"
+ /note="Synthesizes oQ from preQ1 in a single
+ S-adenosylmethionine-requiring step"
+ /codon_start=1
+ /transl_table=11
+ /product="S-adenosylmethionine:tRNA
+ ribosyltransferase-isomerase"
+ /protein_id="YP_001571522.1"
+ /db_xref="GI:161504410"
+ /db_xref="InterPro:IPR003699"
+ /translation="MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGALTHGTFT
+ DLLDKLNPGDVLVFNNTRVIPARLFGRKASGGKIEVLVERMLDDKRILAHIRASKAPK
+ PGTELLLGDDENIHATMTARHGALFEVEFNDERPVLDILNAIGHMPLPPYIDRPDEDA
+ DRELYQTVYSEKPGAVAAPTAGLHFDKPLLAALREKGIEMAFVTLHVGAGTFQPVRVD
+ TIEDHIMHSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPF
+ FGDTQIFIYPGYQYKVIDALVTNFHLPESTLIMLVSAFAGYEHTMNAYKAAVEQKYRF
+ FSYGDAMFITYNPQAIFERVGE"
+ misc_feature complement(2442788..2443819)
+ /gene="queA"
+ /locus_tag="SARI_02521"
+ /note="S-adenosylmethionine:tRNA
+ ribosyltransferase-isomerase; Provisional; Region: queA;
+ PRK00147"
+ /db_xref="CDD:234666"
+ misc_feature complement(2442788..2443816)
+ /gene="queA"
+ /locus_tag="SARI_02521"
+ /note="S-adenosylmethionine:tRNA
+ ribosyltransferase-isomerase; Region: queA; TIGR00113"
+ /db_xref="CDD:232830"
+ unsure 2443549..2443641
+ /note="Sequence derived from one plasmid subclone"
+ gene 2443913..2444494
+ /locus_tag="SARI_02522"
+ CDS 2443913..2444494
+ /locus_tag="SARI_02522"
+ /inference="protein motif:HMMPfam:IPR007431"
+ /inference="similar to AA sequence:SwissProt:Q8XEZ8"
+ /note="Converts holo-ACP to apo-ACP by hydrolytic cleavage
+ of the phosphopantetheine prosthetic group from ACP"
+ /codon_start=1
+ /transl_table=11
+ /product="acyl carrier protein phosphodiesterase"
+ /protein_id="YP_001571523.1"
+ /db_xref="GI:161504411"
+ /db_xref="InterPro:IPR007431"
+ /translation="MNFLAHLHLAHLADSSLSGNLLADFVRGNPATHYPPDVVEGIYM
+ HRRIDAMTDNLPEVREAREWFRHETRRVAPITLDVMWDHFLSRHWTQISPDFPLQSFI
+ GYAHAQVATILPDSPPRFVNLNDYLWSEKWLERYRDMDFIQNVLNGMANRRPRLDALR
+ DSWYDLDAHYDALEERFWHFYPRMMAQAARKAL"
+ misc_feature 2443913..2444491
+ /locus_tag="SARI_02522"
+ /note="acyl carrier protein phosphodiesterase;
+ Provisional; Region: PRK10045"
+ /db_xref="CDD:182207"
+ gene 2444704..2445306
+ /locus_tag="SARI_02523"
+ CDS 2444704..2445306
+ /locus_tag="SARI_02523"
+ /inference="protein motif:Gene3D:IPR012335"
+ /inference="protein motif:HMMPfam:IPR000866"
+ /inference="protein motif:superfamily:IPR012336"
+ /inference="similar to AA sequence:INSD:AAL19356.1"
+ /note="'KEGG: stm:STM0402 1.7e-106 putative THIol - alkyl
+ hydroperoxide reductase K03386;
+ COG: COG0450 Peroxiredoxin;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571524.1"
+ /db_xref="GI:161504412"
+ /db_xref="InterPro:IPR000866"
+ /db_xref="InterPro:IPR012335"
+ /db_xref="InterPro:IPR012336"
+ /translation="MVLVTRQAPDFTAAAVLGNGEIVDKFNFKQHTNGKTTVLFFWPM
+ DFTFVCPSELIAFDKRYEEFQKRGVEVVGVSFDSEFVHNAWRNTPVDKGGIGPVKYAM
+ VADVKREIQKAYGIEHPDEGVALRGSFLIDANGIVRHQVVNDLPLGRNIDEMLRMVDA
+ LQFHEEHGDVCPAQWEKGKEGMNASPDGVAKYLAENISSL"
+ misc_feature 2444704..2445303
+ /locus_tag="SARI_02523"
+ /note="peroxidase; Provisional; Region: PRK15000"
+ /db_xref="CDD:184962"
+ misc_feature 2444713..2445237
+ /locus_tag="SARI_02523"
+ /note="Peroxiredoxin (PRX) family, Typical 2-Cys PRX
+ subfamily; PRXs are thiol-specific antioxidant (TSA)
+ proteins, which confer a protective role in cells through
+ its peroxidase activity by reducing hydrogen peroxide,
+ peroxynitrite, and organic hydroperoxides; Region:
+ PRX_Typ2cys; cd03015"
+ /db_xref="CDD:239313"
+ misc_feature order(2444713..2444715,2444845..2444850,2444857..2444859,
+ 2445046..2445048,2445076..2445078,2445115..2445123,
+ 2445127..2445135,2445145..2445150,2445169..2445171,
+ 2445214..2445225)
+ /locus_tag="SARI_02523"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:239313"
+ misc_feature order(2444839..2444841,2444941..2444946,2445019..2445021,
+ 2445025..2445027,2445061..2445063)
+ /locus_tag="SARI_02523"
+ /note="decamer (pentamer of dimers) interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:239313"
+ misc_feature order(2444842..2444844,2444851..2444853,2445079..2445081)
+ /locus_tag="SARI_02523"
+ /note="catalytic triad [active]"
+ /db_xref="CDD:239313"
+ misc_feature order(2444851..2444853,2445214..2445216)
+ /locus_tag="SARI_02523"
+ /note="peroxidatic and resolving cysteines [active]"
+ /db_xref="CDD:239313"
+ gene complement(2445378..2447195)
+ /locus_tag="SARI_02524"
+ CDS complement(2445378..2447195)
+ /locus_tag="SARI_02524"
+ /inference="protein motif:Gene3D:IPR013781"
+ /inference="protein motif:HMMPfam:IPR006047"
+ /inference="protein motif:HMMSmart:IPR006589"
+ /note="'KEGG: sty:STY0439 0. malZ; maltodextrin
+ glucosidase K01187;
+ COG: COG0366 Glycosidases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="maltodextrin glucosidase"
+ /protein_id="YP_001571525.2"
+ /db_xref="GI:448236263"
+ /db_xref="InterPro:IPR006047"
+ /db_xref="InterPro:IPR006589"
+ /db_xref="InterPro:IPR013781"
+ /translation="MLNAWHLPVAPFVKQHNDKLTITLWLSGENLPSRVTLRSEFDNE
+ EISLAMRKQRRQPQPGVTAWRATLGIASGQPRRRYSFKLLWHDRQQWFTPQGFSRFPP
+ ARLEQFAVDVPDSGPQWVADQIFYQIFPDRFARSETREAEQDRVYYHHAAGREIVLRD
+ WNDPLTTQAGGSTFYGGCLNGICEKLPYLKKLGVTALYLNPVFTAPSVHKYDTEDYRH
+ VDPQFGGDQALLRLRRETQAQGMRLVLDGVFNHSGDSHAWFDRHKCSTGGACHHPDSP
+ WRDWYSFSPEGVALDWLGYPSLPKLDYQSETLVEEIYRGEDSIVRHWLNAPWNMDGWR
+ LDVVHMLGEAGGARKNLQHVVGITQAAKEAQPEAYIVGEHFGDARQWLQADAEDAAMN
+ YRGFTFPLWGFLANTDIAYEPQHIDARICMAWMDNYRAGLSHQQQLRMFNQLDSHDTA
+ RFKTLLGKDVARLPLAVVWLFTWPGVPCIYYGDEVGVDGANDPMCRKPFPWDESKQDG
+ NLLALYQRMTKLRQRSLALRRGGCQALHAEGDVVVFVRVYQQQRALVAINRGEACEVA
+ LEASPLLNVAGWQCKTGRGNISEGILTLPVISATVWMNC"
+ misc_feature complement(2445411..2447195)
+ /locus_tag="SARI_02524"
+ /note="maltodextrin glucosidase; Provisional; Region:
+ PRK10785"
+ /db_xref="CDD:236759"
+ misc_feature complement(2446857..2447195)
+ /locus_tag="SARI_02524"
+ /note="Early set domain associated with the catalytic
+ domain of sugar utilizing enzymes at either the N or C
+ terminus; Region: E_set; cl09101"
+ /db_xref="CDD:245008"
+ misc_feature complement(2445603..2446832)
+ /locus_tag="SARI_02524"
+ /note="Alpha amylase catalytic domain found in
+ cyclomaltodextrinases and related proteins; Region:
+ AmyAc_CMD; cd11338"
+ /db_xref="CDD:200477"
+ misc_feature complement(order(2445708..2445710,2445720..2445722,
+ 2445852..2445857,2446071..2446073,2446077..2446079,
+ 2446185..2446190,2446302..2446304,2446443..2446445,
+ 2446563..2446565,2446569..2446571))
+ /locus_tag="SARI_02524"
+ /note="active site"
+ /db_xref="CDD:200477"
+ misc_feature complement(order(2445903..2445905,2446002..2446004,
+ 2446068..2446073,2446131..2446133,2446164..2446181,
+ 2446296..2446298))
+ /locus_tag="SARI_02524"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:200477"
+ misc_feature complement(order(2445852..2445854,2446077..2446079,
+ 2446188..2446190))
+ /locus_tag="SARI_02524"
+ /note="catalytic site [active]"
+ /db_xref="CDD:200477"
+ unsure 2445647..2445699
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(2447358..2448890)
+ /gene="proY"
+ /locus_tag="SARI_02525"
+ CDS complement(2447358..2448890)
+ /gene="proY"
+ /locus_tag="SARI_02525"
+ /inference="protein motif:HMMPanther:IPR002293"
+ /inference="protein motif:HMMPfam:IPR004841"
+ /inference="protein motif:ScanRegExp:IPR004840"
+ /inference="similar to AA sequence:REFSEQ:YP_215429.1"
+ /note="'cryptic permease that may be involved in the
+ transport of proline across the inner membrane; in
+ Salmonella typhimurium, the proY gene is silent unless
+ overexpressed on a multicopy plasmid or activated by a
+ proZ mutation'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative proline-specific permease"
+ /protein_id="YP_001571526.1"
+ /db_xref="GI:161504414"
+ /db_xref="InterPro:IPR002293"
+ /db_xref="InterPro:IPR004840"
+ /db_xref="InterPro:IPR004841"
+ /translation="MVDANGSDGDPGDYLGSLGGSTGDFQRSLKSLTYVYTTGLNAPW
+ FFIVLIGLKLMESNNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAY
+ IIGGVAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLAGYITGWTYCFEILIVAIAD
+ VTAFGIYMGVWFPAVPHWVWVLSVVLIICAINLMSVKIFGELEFWFSFFKVATIIIMI
+ AAGIGIIVWGIGNGGQPTGIHNLWSNGGFFSNGWLGMIMSLQMVMFAYGGIEIIGITA
+ GEAKDPEKSIPRAINSVPMRILVFYVGTLFVIMSIYPWNQVGTDGSPFVLTFQHMGIT
+ FAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFAKTSRRGIPWVTVLVM
+ TIALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPLEEVKALKF
+ KVPGGVATTIAGLIFLVFIIALIGYHPDTRISLYVGFAWIVLLLIGWTFKRRRDRRLA
+ QA"
+ misc_feature complement(2447361..2448728)
+ /gene="proY"
+ /locus_tag="SARI_02525"
+ /note="putative proline-specific permease; Provisional;
+ Region: proY; PRK10580"
+ /db_xref="CDD:182566"
+ gene complement(2448883..2450121)
+ /locus_tag="SARI_02526"
+ CDS complement(2448883..2450121)
+ /locus_tag="SARI_02526"
+ /inference="protein motif:HMMPfam:IPR004685"
+ /inference="protein motif:HMMTigr:IPR004685"
+ /inference="similar to AA sequence:INSD:AAV78209.1"
+ /note="'KEGG: bja:bll5026 0.0062 rrpP; H+ translocating
+ pyrophosphate synthase K01507;
+ COG: COG1114 Branched-chain amino acid permeases;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571527.1"
+ /db_xref="GI:161504415"
+ /db_xref="InterPro:IPR004685"
+ /translation="MTHQLKSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTA
+ AIGFLITAVGLPVLTVVALAKVGGGVDSLSTPIGKVAGILLATVCYLAVGPLFATPRT
+ ATVSFEVGIAPLTGGSAMPLLIYSLVYFAIVILVSLYPGKLLDTVGNFLAPLKIIALV
+ ILSVAAIVWPAGPISNSLDAYQNTAFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGV
+ TEARLLTRYTVWAGLMAGVGLTLLYLALFRLGSDSATLVDQSANGAAILHAYVQHTFG
+ GAGSFLLAALIFIACLVTAVGLTCACAEFFAQYIPLSYRTLVFILGGFSMVVSNLGLS
+ HLIQISIPVLTAIYPPCIALVVLSFTRSWWHNSTRVIAPAMFISLLFGILDGIKASAF
+ GDVLPAWSQSLPLANRDWRG"
+ misc_feature complement(2448895..2450121)
+ /locus_tag="SARI_02526"
+ /note="branched-chain amino acid transport system 2
+ carrier protein BrnQ; Provisional; Region: PRK15433"
+ /db_xref="CDD:185331"
+ gene 2450168..2450317
+ /locus_tag="SARI_02527"
+ CDS 2450168..2450317
+ /locus_tag="SARI_02527"
+ /inference="similar to AA sequence:REFSEQ:YP_215427.1"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571528.1"
+ /db_xref="GI:161504416"
+ /translation="MPFPKDYKTAFFINFSGKNSRTDAAKNCFSIDRANAVVMTAPGA
+ QFKRL"
+ gene complement(2450530..2451825)
+ /gene="phoR"
+ /locus_tag="SARI_02528"
+ CDS complement(2450530..2451825)
+ /gene="phoR"
+ /locus_tag="SARI_02528"
+ /inference="protein motif:Gene3D:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003661"
+ /inference="protein motif:HMMPfam:IPR013767"
+ /inference="protein motif:HMMSmart:IPR000014"
+ /inference="protein motif:HMMSmart:IPR003594"
+ /inference="protein motif:HMMSmart:IPR003661"
+ /inference="protein motif:superfamily:IPR003594"
+ /inference="protein motif:superfamily:IPR009082"
+ /inference="similar to AA sequence:REFSEQ:NP_459393.1"
+ /note="membrane-associated histidine protein kinase that
+ phosphorylates phoB in response to environmental signals
+ as part of the two-component phosphate regulatory system
+ phoR/phoB"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphate regulon sensor protein"
+ /protein_id="YP_001571529.1"
+ /db_xref="GI:161504417"
+ /db_xref="InterPro:IPR000014"
+ /db_xref="InterPro:IPR003594"
+ /db_xref="InterPro:IPR003661"
+ /db_xref="InterPro:IPR009082"
+ /db_xref="InterPro:IPR013767"
+ /translation="MLERLSWKRLVLELVLCCIPALILSAFLGYLPWFLLAAVTGLLA
+ WHFWNLLRLSWWLWVDRSMTPPPGRGSWEPLLYGLHQMQLRNKKRRRELGNLIKRFRS
+ GAESLPDAVVLTTEEGGIFWCNGLAQQLLGLRWPDDNGQNILNLLRYPEFTQYLKARD
+ LSRPLHLVLNTGRHLEIRVMPYTDKQLLMVARDVTQMHQLEGARRNFFANVSHELRTP
+ LTVLQGYLEMMQEQTLEGATREKALHTMREQTYRMEGLVKQLLTLSKIEAAPVLLLNE
+ KVDVPMMLRVVEREAQTLSQNKHTFTFEVDDSLNVLGNEEQLRSAISNLVYNAVNHTP
+ AGTHITVSWRHVVHGAEFCVQDNGPGIAAEHIPRLTERFYRVDKARSRQTGGSGLGLA
+ IVKHALNHHESRLEVDSSPGKGTRFSFVLPERLIAKNSD"
+ misc_feature complement(2450536..2451825)
+ /gene="phoR"
+ /locus_tag="SARI_02528"
+ /note="phosphate regulon sensor protein; Provisional;
+ Region: phoR; PRK11006"
+ /db_xref="CDD:182895"
+ misc_feature complement(2451550..2451819)
+ /gene="phoR"
+ /locus_tag="SARI_02528"
+ /note="Domain of unknown function (DUF3329); Region:
+ DUF3329; pfam11808"
+ /db_xref="CDD:204751"
+ misc_feature complement(2451187..2451507)
+ /gene="phoR"
+ /locus_tag="SARI_02528"
+ /note="PAS domain; PAS motifs appear in archaea,
+ eubacteria and eukarya. Probably the most surprising
+ identification of a PAS domain was that in EAG-like
+ K+-channels. PAS domains have been found to bind ligands,
+ and to act as sensors for light and oxygen in...; Region:
+ PAS; cd00130"
+ /db_xref="CDD:238075"
+ misc_feature complement(order(2451271..2451273,2451286..2451288,
+ 2451379..2451390,2451427..2451429,2451445..2451447,
+ 2451457..2451459))
+ /gene="phoR"
+ /locus_tag="SARI_02528"
+ /note="putative active site [active]"
+ /db_xref="CDD:238075"
+ misc_feature complement(order(2451244..2451246,2451250..2451252,
+ 2451331..2451333,2451352..2451354,2451361..2451363,
+ 2451385..2451387,2451397..2451399))
+ /gene="phoR"
+ /locus_tag="SARI_02528"
+ /note="heme pocket [chemical binding]; other site"
+ /db_xref="CDD:238075"
+ misc_feature complement(2451031..2451219)
+ /gene="phoR"
+ /locus_tag="SARI_02528"
+ /note="Histidine Kinase A (dimerization/phosphoacceptor)
+ domain; Histidine Kinase A dimers are formed through
+ parallel association of 2 domains creating 4-helix
+ bundles; usually these domains contain a conserved His
+ residue and are activated via...; Region: HisKA; cd00082"
+ /db_xref="CDD:119399"
+ misc_feature complement(order(2451046..2451048,2451058..2451060,
+ 2451067..2451069,2451079..2451081,2451088..2451090,
+ 2451100..2451102,2451151..2451153,2451160..2451162,
+ 2451172..2451174,2451181..2451183,2451193..2451195,
+ 2451205..2451207))
+ /gene="phoR"
+ /locus_tag="SARI_02528"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119399"
+ misc_feature complement(2451187..2451189)
+ /gene="phoR"
+ /locus_tag="SARI_02528"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:119399"
+ misc_feature complement(2450563..2450874)
+ /gene="phoR"
+ /locus_tag="SARI_02528"
+ /note="Histidine kinase-like ATPases; This family includes
+ several ATP-binding proteins for example: histidine
+ kinase, DNA gyrase B, topoisomerases, heat shock protein
+ HSP90, phytochrome-like ATPases and DNA mismatch repair
+ proteins; Region: HATPase_c; cd00075"
+ /db_xref="CDD:238030"
+ misc_feature complement(order(2450575..2450577,2450581..2450586,
+ 2450599..2450601,2450605..2450607,2450653..2450664,
+ 2450743..2450748,2450752..2450754,2450758..2450760,
+ 2450764..2450766,2450833..2450835,2450842..2450844,
+ 2450854..2450856))
+ /gene="phoR"
+ /locus_tag="SARI_02528"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature complement(2450842..2450844)
+ /gene="phoR"
+ /locus_tag="SARI_02528"
+ /note="Mg2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature complement(order(2450656..2450658,2450662..2450664,
+ 2450746..2450748,2450752..2450754))
+ /gene="phoR"
+ /locus_tag="SARI_02528"
+ /note="G-X-G motif; other site"
+ /db_xref="CDD:238030"
+ gene complement(2451895..2452584)
+ /locus_tag="SARI_02529"
+ CDS complement(2451895..2452584)
+ /locus_tag="SARI_02529"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:BlastProDom:IPR001867"
+ /inference="protein motif:HMMPfam:IPR001789"
+ /inference="protein motif:HMMPfam:IPR001867"
+ /inference="protein motif:HMMSmart:IPR001789"
+ /inference="protein motif:HMMTigr:IPR011879"
+ /inference="protein motif:superfamily:IPR011006"
+ /inference="similar to AA sequence:REFSEQ:NP_806197.1"
+ /note="two component response regulator for the phosphate
+ regulon; PhoR phosphorylates PhoB"
+ /codon_start=1
+ /transl_table=11
+ /product="transcriptional regulator PhoB"
+ /protein_id="YP_001571530.1"
+ /db_xref="GI:161504418"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR001867"
+ /db_xref="InterPro:IPR011006"
+ /db_xref="InterPro:IPR011879"
+ /translation="MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNKLNE
+ PWPDLILLDWMLPGGSGLQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDY
+ ITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPGSHRVMTGDNPLDMGPTEF
+ KLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEHSGHDRMVQTV
+ RGTGYRFSTRF"
+ misc_feature complement(2451898..2452584)
+ /locus_tag="SARI_02529"
+ /note="transcriptional regulator PhoB; Provisional;
+ Region: PRK10161"
+ /db_xref="CDD:182277"
+ misc_feature complement(2452225..2452569)
+ /locus_tag="SARI_02529"
+ /note="Signal receiver domain; originally thought to be
+ unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
+ recently identified in eukaroytes ETR1 Arabidopsis
+ thaliana; this domain receives the signal from the sensor
+ partner in a two-component systems; Region: REC; cd00156"
+ /db_xref="CDD:238088"
+ misc_feature complement(order(2452267..2452272,2452279..2452281,
+ 2452336..2452338,2452402..2452404,2452426..2452428,
+ 2452555..2452560))
+ /locus_tag="SARI_02529"
+ /note="active site"
+ /db_xref="CDD:238088"
+ misc_feature complement(2452426..2452428)
+ /locus_tag="SARI_02529"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238088"
+ misc_feature complement(order(2452402..2452410,2452414..2452419))
+ /locus_tag="SARI_02529"
+ /note="intermolecular recognition site; other site"
+ /db_xref="CDD:238088"
+ misc_feature complement(2452264..2452272)
+ /locus_tag="SARI_02529"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238088"
+ misc_feature complement(2451910..2452191)
+ /locus_tag="SARI_02529"
+ /note="Effector domain of response regulator. Bacteria and
+ certain eukaryotes like protozoa and higher plants use
+ two-component signal transduction systems to detect and
+ respond to changes in the environment. The system consists
+ of a sensor histidine kinase and...; Region: trans_reg_C;
+ cd00383"
+ /db_xref="CDD:238225"
+ misc_feature complement(order(2451919..2451921,2451934..2451936,
+ 2451967..2451972,2451994..2451996,2452003..2452005,
+ 2452057..2452062,2452117..2452119))
+ /locus_tag="SARI_02529"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:238225"
+ gene 2452797..2453999
+ /locus_tag="SARI_02530"
+ CDS 2452797..2453999
+ /locus_tag="SARI_02530"
+ /inference="protein motif:HMMPfam:IPR004843"
+ /inference="protein motif:HMMPIR:IPR004593"
+ /inference="protein motif:HMMTigr:IPR004593"
+ /inference="similar to AA sequence:INSD:AAL19350.1"
+ /note="'with SbcC cleaves DNA hairpin structure, also has
+ 5' single-strand endonuclease activity'"
+ /codon_start=1
+ /transl_table=11
+ /product="exonuclease subunit SbcD"
+ /protein_id="YP_001571531.1"
+ /db_xref="GI:161504419"
+ /db_xref="InterPro:IPR004593"
+ /db_xref="InterPro:IPR004843"
+ /translation="MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLDTAQSQQVDAII
+ VAGDIFDTGSPPSYARELYNRFVVNLQQTGCQLVVLAGNHDSVATLNESREILAFLNT
+ TVIASAGYAPQLLHRRDGSPGAVLCPIPFLRPRDIITSQAGLSGSEKQQQLLHAIADY
+ YQQQYQEACLLRGERNLPVIATGHLTTVGASKSDAVRDIYIGTLDAFPAQHFPPADYI
+ ALGHIHRAQCVGGTEHIRYCGSPIALSFDECGKSKCVHLVTFEQGKWQSTESLPIPVS
+ QPLAVLKGDLASITEQLEQWRGVKQSPPVWLDIEITTDDYLHDIQRKIKTLTESLPVE
+ VLLVRRSREQRERSLANERRETLSELSVEEVFARRLALEALDALQRERLNQLFSSTLY
+ ALNEEHEA"
+ misc_feature 2452797..2453996
+ /locus_tag="SARI_02530"
+ /note="exonuclease subunit SbcD; Provisional; Region:
+ PRK10966"
+ /db_xref="CDD:182871"
+ misc_feature 2452800..2453537
+ /locus_tag="SARI_02530"
+ /note="Mre11 nuclease, N-terminal metallophosphatase
+ domain; Region: MPP_Mre11_N; cd00840"
+ /db_xref="CDD:163616"
+ misc_feature order(2452818..2452820,2452824..2452826,2452938..2452940,
+ 2453043..2453048,2453346..2453348,2453460..2453468)
+ /locus_tag="SARI_02530"
+ /note="active site"
+ /db_xref="CDD:163616"
+ misc_feature order(2452818..2452820,2452824..2452826,2452938..2452940,
+ 2453043..2453045,2453346..2453348,2453460..2453462,
+ 2453466..2453468)
+ /locus_tag="SARI_02530"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:163616"
+ misc_feature order(2452830..2452850,2452947..2452949,2453052..2453054,
+ 2453058..2453063,2453190..2453195)
+ /locus_tag="SARI_02530"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:163616"
+ misc_feature 2453616..2453894
+ /locus_tag="SARI_02530"
+ /note="Type 5 capsule protein repressor C-terminal domain;
+ Region: SbcD_C; pfam12320"
+ /db_xref="CDD:221528"
+ gene 2453996..2457136
+ /locus_tag="SARI_02531"
+ CDS 2453996..2457136
+ /locus_tag="SARI_02531"
+ /inference="protein motif:HMMPfam:IPR003395"
+ /inference="protein motif:HMMTigr:IPR004592"
+ /inference="protein motif:ScanRegExp:IPR005479"
+ /note="with SbcD cleaves DNA hairpin structures; also has
+ 5' single-strand endonuclease activity"
+ /codon_start=1
+ /transl_table=11
+ /product="exonuclease subunit SbcC"
+ /protein_id="YP_001571532.1"
+ /db_xref="GI:161504420"
+ /db_xref="InterPro:IPR003395"
+ /db_xref="InterPro:IPR004592"
+ /db_xref="InterPro:IPR005479"
+ /translation="MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKT
+ TLLDAICLALYHETPRLNTVSQSQNDLMTRDTAECLAEVEFEVKGEAWRAFWSQNRAR
+ NQPDGNLQAPRVELARCADGKIVADKVKDKLEMIATLTGLDYGRFTRSMLLSQGQFAA
+ FLNAKAKERAELLEELTGTEIYGQISAQVFEKHKTARLELEKLQAQVSGVALLAEEQL
+ QQLVASLQALTDEEKRLLASQHTQQQHLHWLTRKNELHAELRARQQSLYEAQEAREKA
+ QPQLAALTLAQPARQLRPHWERIQEQTTAVERVRQQINEVNARLQSAYRLRLRIRACA
+ YRQFTQLDATRQRLKTWLTEHDGIRVWRSELAGWRALLTQQSNERAQLSQWQRQLMSD
+ TRQLDALPPLALDLTPQALAEARALHTQQRPLRQRLAALQGQITPKQKRQAQLQAAIT
+ RHQQEQTQYTQHLADKRLSYKAKAQELADVRTICEQEARIKDLESQRARLQPGQPCPL
+ CGSTTHPAIDAYQALELSANQARRDALEKEVNTLAEEGAALRGQLDALTQQVQRDESE
+ ARSLLLEEQALTEEWQTLCAALNVQLQPQEDLSGWLTGAEEHEQQLDQLSQRHALQTQ
+ IAAHTEQVARFTAQIAQRQASLTADLALYKLSLPAPEDEATWLSDRADEAKMWQQRQT
+ ELADLQTQLDRLAPLLETLPQMGTVDVDDDVPLDNWRQAHDECVSLQSQLQTLQQQAT
+ QEQQRATEATVHFDAALKNSPFDSQTAFLAALLDEETLTCLEKQQQALESQLQQAKAL
+ SVQSAQTLADHQQQSPDGLNPTCTAEQLSQKLTQLAQQLRENTTRQGEIRQQIKQDAD
+ NRQHQRALMAEIAKASLEVEDWGYLNALIGSKEGDKFRKFAQGLTLDNLVWLANHQLT
+ RLHGRYLLQRKASDALELEVVDTWLADAVRDTRTLSGGESFLVSLALALALSDLVSHK
+ TRIDSLFLDEGFGTLDSETLDAALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK
+ INGLGYSKLDKMFAVE"
+ misc_feature 2453996..2457133
+ /locus_tag="SARI_02531"
+ /note="exonuclease subunit SbcC; Provisional; Region:
+ PRK10246"
+ /db_xref="CDD:182330"
+ misc_feature 2453996..>2454478
+ /locus_tag="SARI_02531"
+ /note="ATP-binding cassette transporter nucleotide-binding
+ domain; Region: ABC_ATPase; cl17201"
+ /db_xref="CDD:247755"
+ misc_feature 2454104..2454127
+ /locus_tag="SARI_02531"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature order(2454113..2454118,2454122..2454130,2454458..2454460)
+ /locus_tag="SARI_02531"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213179"
+ misc_feature 2454449..2454460
+ /locus_tag="SARI_02531"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213179"
+ misc_feature <2456825..2457085
+ /locus_tag="SARI_02531"
+ /note="ATP-binding cassette transporter nucleotide-binding
+ domain; Region: ABC_ATPase; cl17201"
+ /db_xref="CDD:247755"
+ misc_feature 2456840..2456869
+ /locus_tag="SARI_02531"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213179"
+ misc_feature 2456924..2456941
+ /locus_tag="SARI_02531"
+ /note="Walker B; other site"
+ /db_xref="CDD:213179"
+ misc_feature 2456948..2456959
+ /locus_tag="SARI_02531"
+ /note="D-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature 2457023..2457043
+ /locus_tag="SARI_02531"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213179"
+ gene 2457309..2458481
+ /locus_tag="SARI_02532"
+ CDS 2457309..2458481
+ /locus_tag="SARI_02532"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="similar to AA sequence:INSD:AAV78214.1"
+ /note="member of the major facilitator superfamily (MFS)
+ of transporters; unknown function; may be associated with
+ transport or processing of arabinose polymers"
+ /codon_start=1
+ /transl_table=11
+ /product="MFS transport protein AraJ"
+ /protein_id="YP_001571533.1"
+ /db_xref="GI:161504421"
+ /db_xref="InterPro:IPR011701"
+ /translation="MKKVIFSLALGTFGLGMAEFGIMGVLTELARDVGIAIPAAGYMI
+ SFYAFGVVLGAPIMALFSNRFSLKHILLFLVTLCVIGNAMFTLSSSYLMLAIGRLVSG
+ FPHGAFFGVGAIVLSKIIRPGKVTAAVAGMVSGMTVANLVGIPFGTYLSQEFSWRYTF
+ LLIAVFNIVVLTAIFFWVPDIRDETKSSLREQFHFLRSPAPWLIFAATMFGNAGVFAW
+ FSYIKPFMMYISGFSETSMTFIMMLVGLGMVLGNLLSGKLSGRYTPLRIAVVTDLVIV
+ CSLAALFFFGGYKTASLTFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIAFN
+ LGSAIGAWCGGLMLTLDFAYHYVALPAALLSFSAMSSLLVYGRLKHKLPSVTPVAG"
+ misc_feature 2457309..2458451
+ /locus_tag="SARI_02532"
+ /note="MFS transport protein AraJ; Provisional; Region:
+ PRK10091"
+ /db_xref="CDD:182234"
+ misc_feature 2457321..2458355
+ /locus_tag="SARI_02532"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature order(2457363..2457365,2457372..2457380,2457384..2457389,
+ 2457438..2457440,2457447..2457452,2457459..2457461,
+ 2457471..2457476,2457480..2457485,2457621..2457626,
+ 2457633..2457638,2457645..2457650,2457657..2457659,
+ 2457693..2457698,2457705..2457710,2457726..2457728,
+ 2457942..2457944,2457951..2457956,2457963..2457968,
+ 2457975..2457977,2458017..2458019,2458029..2458031,
+ 2458041..2458043,2458050..2458052,2458062..2458064,
+ 2458206..2458208,2458215..2458220,2458227..2458229,
+ 2458239..2458244,2458251..2458253,2458281..2458286,
+ 2458293..2458298,2458305..2458310,2458317..2458319)
+ /locus_tag="SARI_02532"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene complement(2458503..2459471)
+ /locus_tag="SARI_02534"
+ CDS complement(2458503..2459471)
+ /locus_tag="SARI_02534"
+ /inference="protein motif:HMMPfam:IPR000600"
+ /inference="protein motif:ScanRegExp:IPR000600"
+ /inference="similar to AA sequence:REFSEQ:YP_151527.1"
+ /note="catalyzes phosphorylation of fructose; cytosolic
+ enzyme"
+ /codon_start=1
+ /transl_table=11
+ /product="fructokinase"
+ /protein_id="YP_001571534.1"
+ /db_xref="GI:161504423"
+ /db_xref="InterPro:IPR000600"
+ /translation="MPIRTVNSTLLIFPKNEERYVRIGIDLGGTKTEVIALDDAGEQR
+ FRHRLPTPREDYQQTIETIATLVDMAEQATSQTGSVGIGIPGSISPYTGVVKNANSTW
+ LNGQPFDNDVSRRLKREVRLANDANCLAVSEAVDGAAAGAQTVFAVIIGTGCGAGVAL
+ NGRAHIGGNGTAGEWGHNPLPWMDDDELRYREEIPCYCGKQGCIETFISGTGFATDYQ
+ RLSGKLLKGDEIIHLVETQDAVAELALSRYELRLAKALAHVVNILDPDVIVLGGGMSN
+ VERLYKTVPSLMKSFVFGGECETPVRKARHGDSSGVRGAAWLWPLA"
+ misc_feature complement(2458512..2459411)
+ /locus_tag="SARI_02534"
+ /note="fructokinase; Reviewed; Region: PRK09557"
+ /db_xref="CDD:236565"
+ misc_feature complement(2458944..2459405)
+ /locus_tag="SARI_02534"
+ /note="Nucleotide-Binding Domain of the sugar
+ kinase/HSP70/actin superfamily; Region:
+ NBD_sugar-kinase_HSP70_actin; cd00012"
+ /db_xref="CDD:212657"
+ misc_feature complement(order(2459016..2459027,2459097..2459099,
+ 2459373..2459375,2459379..2459381,2459385..2459396))
+ /locus_tag="SARI_02534"
+ /note="nucleotide binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:212657"
+ gene 2459537..2460448
+ /gene="rdgC"
+ /locus_tag="SARI_02533"
+ CDS 2459537..2460448
+ /gene="rdgC"
+ /locus_tag="SARI_02533"
+ /inference="protein motif:HMMPfam:IPR007476"
+ /inference="similar to AA sequence:REFSEQ:YP_215420.1"
+ /note="Required for efficient pilin antigenic variation"
+ /codon_start=1
+ /transl_table=11
+ /product="recombination associated protein"
+ /protein_id="YP_001571535.2"
+ /db_xref="GI:448236264"
+ /db_xref="InterPro:IPR007476"
+ /translation="MLWFKNLMVYRLSRDITLRAEEMEKQLASMTFTPCGSQDMAKMG
+ WVPPMGSHSDALTHTANGQIIICARKEEKILPSPVIKQALEAKIQKLEADQGRKLKKT
+ EKDSLKDEVLHSLLPRAFSRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGS
+ LPVVPLALENPIELTLTEWVRSGTVAQGFQLLDEAELKAMLEDGGVIRAKKQDLVSDE
+ IAVHIEAGKVVTKLALDWQQRIQFVMCDDGSIKRLKFCDELRDQNEDIDREDFAQRFD
+ ADFILMTGELAALIQSLVEGLGGEAQR"
+ misc_feature 2459540..2460445
+ /gene="rdgC"
+ /locus_tag="SARI_02533"
+ /note="DNA recombination-dependent growth factor C [DNA
+ replication, recombination, and repair]; Region: RdgC;
+ COG2974"
+ /db_xref="CDD:225521"
+ gene complement(2460486..2460770)
+ /locus_tag="SARI_02535"
+ CDS complement(2460486..2460770)
+ /locus_tag="SARI_02535"
+ /inference="protein motif:HMMPfam:IPR009664"
+ /inference="protein motif:superfamily:IPR011051"
+ /inference="similar to AA sequence:SwissProt:Q5PFU0"
+ /note="'COG: COG3123 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571536.1"
+ /db_xref="GI:161504424"
+ /db_xref="InterPro:IPR009664"
+ /db_xref="InterPro:IPR011051"
+ /translation="MLQSNEYFSGKVKSIGFTSSSTGRASVGVMAEGEYTFGTAEPEE
+ MTVVSGALKVLLPGTVDWKVYTAGDVFNVPGHSEFHLQIAEPTSYLCRYL"
+ misc_feature complement(2460489..2460770)
+ /locus_tag="SARI_02535"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10579"
+ /db_xref="CDD:182565"
+ gene complement(2460841..2461518)
+ /locus_tag="SARI_02536"
+ CDS complement(2460841..2461518)
+ /locus_tag="SARI_02536"
+ /inference="protein motif:HMMPfam:IPR010843"
+ /inference="similar to AA sequence:REFSEQ:YP_151530.1"
+ /note="'COG: NOG06193 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571537.1"
+ /db_xref="GI:161504425"
+ /db_xref="InterPro:IPR010843"
+ /translation="MSASLAILTIGVVPMSEVLPLLTEYIDEQHITHHSLLGKMSRED
+ VMADYAVEPGDDPLLTLLNDNQIAHVSRQKVERDLQSVVEVLDNQGYDVIILMSTAVI
+ KSMAARNTILLEPLRIIPPLVASIVDGHQVGVIVPVAELLAAQEKKWQVLQKPPVYSL
+ ANPVHGSEQQLIDAGQALLDQGADVIMLDCLGFHQRHRDILQQALDVPVLLSNVLIAR
+ LASELLV"
+ misc_feature complement(2460847..2461518)
+ /locus_tag="SARI_02536"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10481"
+ /db_xref="CDD:182491"
+ gene complement(2461770..2461961)
+ /locus_tag="SARI_02537"
+ CDS complement(2461770..2461961)
+ /locus_tag="SARI_02537"
+ /inference="similar to AA sequence:INSD:CAD08844.1"
+ /note="'COG: NOG13867 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571538.1"
+ /db_xref="GI:161504426"
+ /translation="MPTRPPYPREAYIVTIEKGAPGQTVTWYQLRADHPKPDSLISEH
+ PTAEEAMDAKKRYEDPDKS"
+ misc_feature complement(2461773..2461961)
+ /locus_tag="SARI_02537"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10380"
+ /db_xref="CDD:182421"
+ gene complement(2461988..2462533)
+ /gene="aroL"
+ /locus_tag="SARI_02538"
+ CDS complement(2461988..2462533)
+ /gene="aroL"
+ /locus_tag="SARI_02538"
+ /inference="protein motif:FPrintScan:IPR000623"
+ /inference="protein motif:HMMPfam:IPR000623"
+ /inference="protein motif:ScanRegExp:IPR000623"
+ /inference="similar to AA sequence:INSD:AAO70064.1"
+ /note="type II enzyme similar to type I but differentially
+ regulated and with a lower Km; catalyzes the formation of
+ shikimate 3-phosphate from shikimate in aromatic amino
+ acid biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="shikimate kinase II"
+ /protein_id="YP_001571539.1"
+ /db_xref="GI:161504427"
+ /db_xref="InterPro:IPR000623"
+ /translation="MMQPLYLVGPRGCGKTTIGMALAQATGFRFTDTDRWLQSYAQMS
+ VADIVEKEGWEGFRVRETTALEAVSAPSTVVATGGGIILTEYNRRYMRRVGVVIYLCA
+ PVATLVNRLEAEPEVELRPTLTGKPLNEEVREVLDQRDALYRETAHYIIDATKAPTQV
+ VSEIMAALPTSTQRLQGDVYT"
+ misc_feature complement(2462012..2462533)
+ /gene="aroL"
+ /locus_tag="SARI_02538"
+ /note="Shikimate kinase [Amino acid transport and
+ metabolism]; Region: AroK; COG0703"
+ /db_xref="CDD:223775"
+ misc_feature complement(2462069..2462524)
+ /gene="aroL"
+ /locus_tag="SARI_02538"
+ /note="Shikimate kinase (SK) is the fifth enzyme in the
+ shikimate pathway, a seven-step biosynthetic pathway which
+ converts erythrose-4-phosphate to chorismic acid, found in
+ bacteria, fungi and plants. Chorismic acid is a important
+ intermediate in the synthesis...; Region: SK; cd00464"
+ /db_xref="CDD:238260"
+ misc_feature complement(order(2462174..2462176,2462204..2462206,
+ 2462483..2462500))
+ /gene="aroL"
+ /locus_tag="SARI_02538"
+ /note="ADP binding site [chemical binding]; other site"
+ /db_xref="CDD:238260"
+ misc_feature complement(order(2462432..2462434,2462438..2462440,
+ 2462486..2462488))
+ /gene="aroL"
+ /locus_tag="SARI_02538"
+ /note="magnesium binding site [ion binding]; other site"
+ /db_xref="CDD:238260"
+ misc_feature complement(order(2462117..2462119,2462294..2462302,
+ 2462351..2462353,2462360..2462362,2462432..2462434))
+ /gene="aroL"
+ /locus_tag="SARI_02538"
+ /note="putative shikimate binding site; other site"
+ /db_xref="CDD:238260"
+ gene complement(2462718..2463173)
+ /locus_tag="SARI_02539"
+ CDS complement(2462718..2463173)
+ /locus_tag="SARI_02539"
+ /inference="protein motif:BlastProDom:IPR003791"
+ /inference="protein motif:HMMPfam:IPR003791"
+ /inference="similar to AA sequence:SwissProt:P67334"
+ /note="'COG: COG1671 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571540.1"
+ /db_xref="GI:161504428"
+ /db_xref="InterPro:IPR003791"
+ /translation="MTIWVDADACPNVIKEILYRAAERMQLPLILVANQALRVPPSRF
+ IRTLRVAAGFDVADNEIVRQCETGDLVITADIPLAAEVLERGAAALNPRGERYSEATI
+ RERLTMRDFMDTLRASGVQTGGPNSLSPRDRQHFAAELDKWWLEIQRKK"
+ misc_feature complement(2462721..2463173)
+ /locus_tag="SARI_02539"
+ /note="hypothetical protein; Validated; Region: PRK00124"
+ /db_xref="CDD:178882"
+ gene 2463313..2464122
+ /locus_tag="SARI_02540"
+ CDS 2463313..2464122
+ /locus_tag="SARI_02540"
+ /inference="protein motif:HMMPanther:IPR000304"
+ /inference="protein motif:HMMPfam:IPR004455"
+ /inference="protein motif:HMMPIR:IPR000304"
+ /inference="protein motif:HMMTigr:IPR000304"
+ /inference="protein motif:ScanRegExp:IPR000304"
+ /inference="protein motif:superfamily:IPR008948"
+ /inference="similar to AA sequence:REFSEQ:YP_215414.1"
+ /note="catalyzes the formation of L-proline from
+ pyrroline-5-carboxylate"
+ /codon_start=1
+ /transl_table=11
+ /product="pyrroline-5-carboxylate reductase"
+ /protein_id="YP_001571541.1"
+ /db_xref="GI:161504429"
+ /db_xref="InterPro:IPR000304"
+ /db_xref="InterPro:IPR004455"
+ /db_xref="InterPro:IPR008948"
+ /translation="MEKKIGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSPDKVAA
+ LHDQYGINAAQNAQEVAQIADIVFGAVKPGIMVKVLSEISSSLNKDSLVVSIAAGVTL
+ DQLARALGHDRKIIRAMPNTPSLVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVI
+ AEPMIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMGTAKMVLET
+ GKHPGELKDMVCSPGGTTIEAVRVLEERGFRAAVIEAMTKCMEKSEALSKS"
+ misc_feature 2463313..2464119
+ /locus_tag="SARI_02540"
+ /note="pyrroline-5-carboxylate reductase; Reviewed;
+ Region: PRK11880"
+ /db_xref="CDD:237008"
+ misc_feature 2463313..2464116
+ /locus_tag="SARI_02540"
+ /note="NADP oxidoreductase coenzyme F420-dependent;
+ Region: F420_oxidored; cl17232"
+ /db_xref="CDD:247786"
+ gene complement(2464140..2465248)
+ /locus_tag="SARI_02541"
+ /note="Pseudogene compared to gi|16763765|ref|NP_459380.1|
+ hypothetical protein STM0385 [Salmonella typhimurium LT2]"
+ gene complement(2465338..2465658)
+ /locus_tag="SARI_02542"
+ CDS complement(2465338..2465658)
+ /locus_tag="SARI_02542"
+ /inference="protein motif:HMMPfam:IPR011690"
+ /inference="similar to AA sequence:INSD:AAV78224.1"
+ /note="'COG: NOG17162 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571542.1"
+ /db_xref="GI:161504430"
+ /db_xref="InterPro:IPR011690"
+ /translation="MKITLLVTLLFGLVFLTTVGAAEKPLTPQQQRMTTCNQQATAKA
+ LKGDARKTYLSDCLKNSKSAPGEKSLTPQQQKMRECNVQATEQSLKGDDRSKFMSACL
+ KKAV"
+ misc_feature complement(2465344..2465598)
+ /locus_tag="SARI_02542"
+ /note="hypothetical protein; Provisional; Region:
+ PRK11505"
+ /db_xref="CDD:183165"
+ misc_feature complement(2465482..2465583)
+ /locus_tag="SARI_02542"
+ /note="psiF repeat; Region: PsiF_repeat; pfam07769"
+ /db_xref="CDD:203759"
+ misc_feature complement(2465350..2465454)
+ /locus_tag="SARI_02542"
+ /note="psiF repeat; Region: PsiF_repeat; pfam07769"
+ /db_xref="CDD:203759"
+ gene complement(2466011..2466277)
+ /locus_tag="SARI_02543"
+ CDS complement(2466011..2466277)
+ /locus_tag="SARI_02543"
+ /inference="similar to AA sequence:REFSEQ:NP_454978.1"
+ /note="'COG: NOG14126 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571543.1"
+ /db_xref="GI:161504431"
+ /translation="MVMKNLIAELLLKLAQKEEESKELVAQVEALEIIVTAMLRNMAQ
+ SEQQMLIRQVEGALEGVKPDASVPDHDTELLRQYVKKLLRHPRH"
+ misc_feature complement(2466014..2466271)
+ /locus_tag="SARI_02543"
+ /note="anti-RssB factor; Provisional; Region: PRK10244"
+ /db_xref="CDD:236666"
+ gene complement(2466568..2467779)
+ /locus_tag="SARI_02544"
+ CDS complement(2466568..2467779)
+ /locus_tag="SARI_02544"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="similar to AA sequence:INSD:AAL19336.1"
+ /note="'KEGG: bma:BMAA1647 1.6e-05
+ diaminobutyrate--pyruvate aminotransferase/membrane
+ protein, putative K00836;
+ COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571544.1"
+ /db_xref="GI:161504432"
+ /db_xref="InterPro:IPR011701"
+ /translation="MESWRVNLISVWFGCFFTGLAISQILPFLPLYISQLGVFSHKAL
+ SMWSGLTFSITFLISAIVSPMWGSLADRKGRKLMLLRASLGMAIAIFLQAFATHVWQL
+ FLLRGIMGLTSGYIPNAMALVASQVPRERSGWALSTLSTAQISGVIGGPLMGGFVADH
+ IGLRAVFLITAMLMVVSFLVTLFLIKEGVRPVIKKSERLSGKAVFASLPYPALVISLF
+ FTTMVIQLCNGSISPILALFIKSMMPDSNNLAFLSGLIASVPGISALISAPRLGKLGD
+ RIGTERILMSTLICAVLLFFAMSWVTTPFQLGLLRFLLGFADGAMLPAVQTLLVKYSS
+ DQITGRIFGYNQSFMYLGNVVGPLMGATVSAMAGFRWVFIVTAAIVLINIGQLTLALR
+ RRRNAQKAKAQ"
+ misc_feature complement(2466628..2467773)
+ /locus_tag="SARI_02544"
+ /note="drug efflux system protein MdtG; Provisional;
+ Region: PRK09874"
+ /db_xref="CDD:182127"
+ misc_feature complement(2466634..2467758)
+ /locus_tag="SARI_02544"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature complement(order(2466721..2466723,2466730..2466735,
+ 2466742..2466747,2466754..2466759,2466790..2466792,
+ 2466799..2466804,2466814..2466816,2466823..2466828,
+ 2466835..2466837,2466976..2466978,2466988..2466990,
+ 2466997..2466999,2467009..2467011,2467030..2467032,
+ 2467072..2467074,2467081..2467086,2467093..2467098,
+ 2467105..2467107,2467339..2467341,2467357..2467362,
+ 2467369..2467374,2467408..2467410,2467417..2467422,
+ 2467429..2467434,2467438..2467443,2467579..2467584,
+ 2467588..2467593,2467603..2467605,2467612..2467617,
+ 2467624..2467626,2467690..2467695,2467699..2467707,
+ 2467714..2467716))
+ /locus_tag="SARI_02544"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene complement(2467948..2468661)
+ /locus_tag="SARI_02545"
+ CDS complement(2467948..2468661)
+ /locus_tag="SARI_02545"
+ /inference="protein motif:HMMPfam:IPR009683"
+ /inference="similar to AA sequence:INSD:AAV78227.1"
+ /note="'COG: COG3921 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571545.1"
+ /db_xref="GI:161504433"
+ /db_xref="InterPro:IPR009683"
+ /translation="MFKGCENGGRVKGKGFLIIMLLGGIGGLGYCCLPSYYNPFSPLQ
+ LSDPPGWITTFKLQRLTPPQCRQLLTAANQQGLISSQPVADSAGECPLTHVVRVRDFG
+ QVKLSSSFLASCPLALSSALFVEQQAKSLTETWMKRRLIRIEHLGSYACRNIYHRSDA
+ RRSEHAGAEALDVSGFQLSDGRKITVLRGWKREETGPWLRAMLNASCHYYGNGLGPDY
+ NAAHANHFHLGMRGYGVCR"
+ misc_feature complement(2467951..2468478)
+ /locus_tag="SARI_02545"
+ /note="Extensin-like protein C-terminus; Region:
+ Extensin-like_C; pfam06904"
+ /db_xref="CDD:219224"
+ gene 2468721..2469833
+ /gene="ddl"
+ /locus_tag="SARI_02546"
+ CDS 2468721..2469833
+ /gene="ddl"
+ /locus_tag="SARI_02546"
+ /inference="protein motif:Gene3D:IPR013816"
+ /inference="protein motif:Gene3D:IPR013817"
+ /inference="protein motif:HMMPfam:IPR011095"
+ /inference="protein motif:HMMPfam:IPR011127"
+ /inference="protein motif:HMMTigr:IPR005905"
+ /inference="protein motif:ScanRegExp:IPR000291"
+ /inference="similar to AA sequence:REFSEQ:YP_215408.1"
+ /note="D-alanine--D-alanine ligase; DdlA; DdlB;
+ cytoplasmic; catalyzes the formation of D-alanyl-D-alanine
+ from two D-alanines in peptidoglycan synthesis; there are
+ two forms of this enzyme in Escherichia coli"
+ /codon_start=1
+ /transl_table=11
+ /product="D-alanyl-alanine synthetase A"
+ /protein_id="YP_001571546.1"
+ /db_xref="GI:161504434"
+ /db_xref="InterPro:IPR000291"
+ /db_xref="InterPro:IPR005905"
+ /db_xref="InterPro:IPR011095"
+ /db_xref="InterPro:IPR011127"
+ /db_xref="InterPro:IPR013816"
+ /db_xref="InterPro:IPR013817"
+ /translation="MEWVFKMAKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDV
+ VLLGIDKAGQWHVNDAENYLQNADDPAHIALRPSAISLAQVPGKHEQQLINAQNGQPL
+ PTIDVIFPIVHGTLGEDGSLQGMLRVANLPFVGSDVLSSAACMDKDVAKRLLRDAGLN
+ IAPFITLTRANRHAFSFAEMESRLGLPLFVKPANQGSSVGVSKVANEAQYLQAVALAF
+ EFDHKVVVEQGIKGREIECAVLGNDSPQASTCGEIVLNSEFYAYDTKYIDDNGAQVVV
+ PAQIPSGVNDKIRAIAIQAYQTLGCAGMARVDVFLTPENEVVINEINTLPGFTNISMY
+ PKLWQASGLGYTDLISRLIELALERHAADNALKTTM"
+ misc_feature 2468739..2469794
+ /gene="ddl"
+ /locus_tag="SARI_02546"
+ /note="D-alanyl-alanine synthetase A; Reviewed; Region:
+ ddl; PRK01966"
+ /db_xref="CDD:234993"
+ misc_feature 2468748..2469128
+ /gene="ddl"
+ /locus_tag="SARI_02546"
+ /note="D-ala D-ala ligase N-terminus; Region:
+ Dala_Dala_lig_N; pfam01820"
+ /db_xref="CDD:216721"
+ misc_feature 2469177..2469782
+ /gene="ddl"
+ /locus_tag="SARI_02546"
+ /note="D-ala D-ala ligase C-terminus; Region:
+ Dala_Dala_lig_C; pfam07478"
+ /db_xref="CDD:203643"
+ gene complement(2469859..2470074)
+ /locus_tag="SARI_02547"
+ CDS complement(2469859..2470074)
+ /locus_tag="SARI_02547"
+ /inference="similar to AA sequence:INSD:CAD08834.1"
+ /note="'COG: NOG15537 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571547.1"
+ /db_xref="GI:161504435"
+ /translation="MRLPVKIRRDWHYYAFAIGLIFILNGVVGLLGFEAKGWQTYGVG
+ LITWIISFWLAGLIIRRREDDKAKDAR"
+ misc_feature complement(2469898..2470074)
+ /locus_tag="SARI_02547"
+ /note="Protein of unknown function (DUF2754); Region:
+ DUF2754; pfam10953"
+ /db_xref="CDD:151400"
+ gene 2470343..2470651
+ /locus_tag="SARI_02548"
+ CDS 2470343..2470651
+ /locus_tag="SARI_02548"
+ /inference="similar to AA sequence:INSD:AAO70074.1"
+ /note="'COG: NOG11448 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571548.1"
+ /db_xref="GI:161504436"
+ /translation="MADFTLSKSLFSGKHRETSSAPGNIAYAVFVLFCFWAGAQLLNL
+ LVHAPGIYEHLMQVQDTGRPRVEIGLGVGTIFGLVPFLTGCLIFAVIAAFLRWRHRHQ
+ "
+ misc_feature 2470343..2470645
+ /locus_tag="SARI_02548"
+ /note="Protein of unknown function (DUF2755); Region:
+ DUF2755; pfam10954"
+ /db_xref="CDD:151401"
+ gene complement(2470689..2471783)
+ /locus_tag="SARI_02549"
+ CDS complement(2470689..2471783)
+ /locus_tag="SARI_02549"
+ /inference="protein motif:HMMPfam:IPR011673"
+ /inference="similar to AA sequence:REFSEQ:YP_215405.1"
+ /note="'COG: NOG06003 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571549.1"
+ /db_xref="GI:161504437"
+ /db_xref="InterPro:IPR011673"
+ /translation="MSTVSRLYFLTFLAVAMLAGCSSQSGKPVNKGEKPVDVANVVRQ
+ KMPASVKDKEAWAKDIAITFKSQGLAPTVENICSVLAVAQQESGYQADPVVPGLSKIA
+ WQEIDRRAERLHIPLFLVHTTLKINSPNGKSYSERLDTVRTEKQLSAIFDDFINMVPM
+ GQTLFGSYNPVHTGGPMQVSIAFAEQHAKGYPWKMAGTVRQEVFTRRGGLWFGTYHLL
+ NYPANYSAPVFRFADFNAGWYASRNAAFQNAVSKASGVKLALDGDLIRYNSKEPGKTE
+ LAARKLADQLGMSEREIRSQLEKGDSLAFEKTTLYKNVYKLAEAKTGRTLAREMLPGI
+ QLESPKITRKLTTAWFAKRVDERRARCMGR"
+ misc_feature complement(2470692..2471642)
+ /locus_tag="SARI_02549"
+ /note="Protein of unknown function (DUF1615); Region:
+ DUF1615; pfam07759"
+ /db_xref="CDD:219558"
+ gene complement(2471798..2473021)
+ /locus_tag="SARI_02550"
+ CDS complement(2471798..2473021)
+ /locus_tag="SARI_02550"
+ /inference="protein motif:HMMPfam:IPR009248"
+ /inference="similar to AA sequence:REFSEQ:NP_459371.1"
+ /note="'in Escherichia coli SbmA is involved in uptake of
+ microcin J25; functions along with FhuA, TonB, and ExbB/D
+ in this capacity; in Sinorhizobium meliloti, BacA is
+ essential and required for symbiosis; defects appear to
+ affect the cell envelope'"
+ /codon_start=1
+ /transl_table=11
+ /product="transport protein"
+ /protein_id="YP_001571550.1"
+ /db_xref="GI:161504438"
+ /db_xref="InterPro:IPR009248"
+ /translation="MMFKSFFPKPGPFFISAFVWALVAVIFWQAGGGDWVARLVGASD
+ KVPISAARFWSLDYLIFYAYYLICIGLFATFWFIYSPHRWQYWSILGTSLIIFVTWFL
+ VEVGVAVNAWYAPFYDLIQTALSSPHKVTIGQFYHEVGVFLGIALIAVVVGVLNNFFV
+ SHYVFRWRTAMNEHYMAHWQYLRHIEGAAQRVQEDTMRFASTLENMGVSFINAIMTLI
+ AFLPVLVTLSAHVPDLPVVGHIPYGLVIAAIVWSLMGTGLLAVVGIKLPGLEFKNQRV
+ EAAYRKELVYGEDDTSRATPPTVRELFSAVRHNYFRLYFHYMYFNIARILYLQVDNVF
+ GLFLLFPSIVAGTITLGLMTQITNVFGQVRGSFQYLINSWTTLVELMSIYKRLRSFER
+ QLDGQPVQEVTHSFS"
+ misc_feature complement(2471801..2472979)
+ /locus_tag="SARI_02550"
+ /note="microcin B17 transporter; Reviewed; Region:
+ PRK11098"
+ /db_xref="CDD:182960"
+ gene 2473365..2474522
+ /locus_tag="SARI_02551"
+ CDS 2473365..2474522
+ /locus_tag="SARI_02551"
+ /inference="protein motif:HMMPfam:IPR001466"
+ /inference="protein motif:superfamily:IPR012338"
+ /inference="similar to AA sequence:REFSEQ:NP_454970.1"
+ /note="this protein has no known enzymatic function"
+ /codon_start=1
+ /transl_table=11
+ /product="beta-lactam binding protein AmpH"
+ /protein_id="YP_001571551.1"
+ /db_xref="GI:161504439"
+ /db_xref="InterPro:IPR001466"
+ /db_xref="InterPro:IPR012338"
+ /translation="MKRSLLFTATLFATSVTSVQAAQPIADPVFASDIVDRYAEHIFY
+ GSGATGMALVVIDGNQRVFRSFGETRPGNNVRPQLDSVIRIASLTKLMTSEMLVKLLD
+ QGTVKLNDPLSKYAPPGARVPTYKGTPITLVNLATHTSALPREQPGGAAHRPVFVWPT
+ REQRWNWISTATLKVSPGSQAAYSNLAFDLLADALANASGKPYTQLFEEKITRPLGMK
+ DTTFTPSPDQCKRLMVAEKGASPCNNTLAAIGSGGVYSTPGDMMRWMQQYLSSDFYHR
+ SHQADRMQTLIFQRTQLKKMIGMDVPGKADALGLGWVYMAPKDGRPGIIQKTGGGGGF
+ ITYMAMIPQYNIGAFVVVTRSPLTRFTNMSDGINDLVTELSSNKPIVIPAS"
+ misc_feature 2473365..2474498
+ /locus_tag="SARI_02551"
+ /note="beta-lactam binding protein AmpH; Provisional;
+ Region: PRK10662"
+ /db_xref="CDD:236732"
+ misc_feature 2473377..2474441
+ /locus_tag="SARI_02551"
+ /note="Beta-lactamase class C and other penicillin binding
+ proteins [Defense mechanisms]; Region: AmpC; COG1680"
+ /db_xref="CDD:224594"
+ gene complement(2474566..2474997)
+ /locus_tag="SARI_02552"
+ /note="Pseudogene based on alignment with
+ gi|16763754|ref|NP_459369.1|"
+ gene 2475263..2476237
+ /locus_tag="SARI_02553"
+ CDS 2475263..2476237
+ /locus_tag="SARI_02553"
+ /inference="protein motif:BlastProDom:IPR001731"
+ /inference="protein motif:FPrintScan:IPR001731"
+ /inference="protein motif:HMMPanther:IPR001731"
+ /inference="protein motif:HMMPfam:IPR001731"
+ /inference="protein motif:ScanRegExp:IPR001731"
+ /inference="similar to AA sequence:INSD:AAV78235.1"
+ /note="catalyzes the formation of porphobilinogen from
+ 5-aminolevulinate"
+ /codon_start=1
+ /transl_table=11
+ /product="delta-aminolevulinic acid dehydratase"
+ /protein_id="YP_001571552.1"
+ /db_xref="GI:161504440"
+ /db_xref="InterPro:IPR001731"
+ /translation="MTDLIHRPRRLRKSAALRAMFEETTLSLNDLVLPIFVEEELDDY
+ KAIDAMPGVMRIPEKQLAREIERIANAGIRSVMTFGISHHTDDTGSDAWKEDGLVARM
+ SRICKQTVPEMIVMSDTCFCEYTSHGHCGVLCEHGVDNDATLANLGKQAVVAAAAGAD
+ FIAPSAAMDGQVQAIRQALDAAGFTDTAIMSYSTKFASSFYGPFREAAGTALKGDRKT
+ YQMNPMNRREAIRESLLDEAQGADCLMVKPAGAYLDVLREIRERTELPLGAYQVSGEY
+ AMIKFAAMAGAIDEEKVVLESLGSIKRAGADLIFSYFALDLAEKNILR"
+ misc_feature 2475287..2476222
+ /locus_tag="SARI_02553"
+ /note="Porphobilinogen synthase (PBGS), which is also
+ called delta-aminolevulinic acid dehydratase (ALAD),
+ catalyzes the condensation of two 5-aminolevulinic acid
+ (ALA) molecules to form the pyrrole porphobilinogen (PBG),
+ which is the second step in the...; Region: ALAD_PBGS;
+ cd00384"
+ /db_xref="CDD:238226"
+ misc_feature order(2475287..2475289,2475296..2475301,2475332..2475334,
+ 2475404..2475406,2475413..2475415,2475680..2475685,
+ 2475764..2475769,2475854..2475862,2475917..2475919,
+ 2475926..2475928,2475944..2475946,2475953..2475958,
+ 2476010..2476024,2476094..2476096,2476148..2476150,
+ 2476160..2476162,2476169..2476171)
+ /locus_tag="SARI_02553"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238226"
+ misc_feature order(2475614..2475616,2475620..2475622,2475626..2475628,
+ 2475650..2475652,2475755..2475757,2475845..2475847,
+ 2475863..2475865,2475872..2475877,2475890..2475892,
+ 2475908..2475910,2475920..2475922,2476001..2476003,
+ 2476070..2476072,2476079..2476081,2476196..2476198)
+ /locus_tag="SARI_02553"
+ /note="active site"
+ /db_xref="CDD:238226"
+ misc_feature order(2475845..2475847,2476001..2476003)
+ /locus_tag="SARI_02553"
+ /note="Schiff base residues; other site"
+ /db_xref="CDD:238226"
+ gene complement(2476364..2478250)
+ /gene="prpE"
+ /locus_tag="SARI_02554"
+ CDS complement(2476364..2478250)
+ /gene="prpE"
+ /locus_tag="SARI_02554"
+ /inference="protein motif:FPrintScan:IPR000873"
+ /inference="protein motif:HMMPfam:IPR000873"
+ /inference="protein motif:HMMTigr:IPR012694"
+ /inference="protein motif:ScanRegExp:IPR000873"
+ /note="'catalyzes the formation of propionyl-CoA using
+ propionate as a substrate; PrpE from Ralstonia
+ solanacearum can produce acetyl-, propionyl-, butyryl- and
+ acrylyl-coenzyme A, and Salmonella enterica produces
+ propionyl- and butyryl-coenzyme A; not expressed in
+ Escherichia coli when grown on propionate/minimal media;
+ ATP-dependent'"
+ /codon_start=1
+ /transl_table=11
+ /product="propionyl-CoA synthetase"
+ /protein_id="YP_001571553.1"
+ /db_xref="GI:161504441"
+ /db_xref="InterPro:IPR000873"
+ /db_xref="InterPro:IPR012694"
+ /translation="MSFSEFYQRSINEPEAFWAEQARRIDWRQPFTQTLDHSRPPFAR
+ WFCGGTTNLCHNAIDRWLDKQPEALALIAVSSETDEERTFTFSQLHDEVNAVAAMLLS
+ LGVQRGDRVLVYMPMIAEAHITLLACARIGAIHSVVFGGFASHSVAARIDDARPALIV
+ SADAGSRGGKILPYKKLLDDAIAQAQHQPKHVLLVDRGLAKMARVDGRDLDFATLRQQ
+ HLGARVPVVWLESNETSCILYTSGTTGKPKGVQRDVGGYAVALATSMDTIFGGKAGGV
+ FFCASDIGWVVGHSYIVYAPLLAGMASIVYEGLPTWPDCGVWWKIVEKYQVNRMFSAP
+ TAIRVLKKFPTAQIRNHDLSSLEVLYLAGEPLDEPTAAWVTETLGVPVIDNYWQTESG
+ WPIMALAPDLDDRPSRLGSPGVPMYGYNVQLLNEVTGEPCGINEKGMLVIEGPLPPGC
+ IQTIWGDDARFVKTYWSLFNRQVYATFDWGIRDDEGYYFILGRTDDVINIAGHRLGTR
+ EIEESISSYPNVAEVAVVGIKDALKGQVAVAFVIPKQGDTLEDREAARDEEKAIIALV
+ DSQIGNFGRPAHVWFVSQLPKTRSGKMLRRTIQAICEGRDPGDLTTIDDPASLQQIRQ
+ AIEE"
+ misc_feature complement(2476367..2478250)
+ /gene="prpE"
+ /locus_tag="SARI_02554"
+ /note="propionyl-CoA synthetase; Provisional; Region:
+ prpE; PRK10524"
+ /db_xref="CDD:182517"
+ misc_feature complement(2476385..2478217)
+ /gene="prpE"
+ /locus_tag="SARI_02554"
+ /note="Adenylate forming domain, Class I; Region:
+ AFD_class_I; cl17068"
+ /db_xref="CDD:247692"
+ misc_feature complement(order(2477507..2477512,2477516..2477533,
+ 2477540..2477542))
+ /gene="prpE"
+ /locus_tag="SARI_02554"
+ /note="acyl-activating enzyme (AAE) consensus motif; other
+ site"
+ /db_xref="CDD:213270"
+ misc_feature complement(order(2476475..2476477,2476739..2476741,
+ 2476772..2476774,2476781..2476783,2476817..2476819,
+ 2477084..2477101,2477162..2477167,2477531..2477533))
+ /gene="prpE"
+ /locus_tag="SARI_02554"
+ /note="AMP binding site [chemical binding]; other site"
+ /db_xref="CDD:213270"
+ misc_feature complement(order(2476532..2476534,2476739..2476750,
+ 2476772..2476774,2476781..2476783,2476817..2476819,
+ 2477084..2477101,2477162..2477167,2477234..2477236,
+ 2477243..2477248,2477252..2477254,2477405..2477410,
+ 2477531..2477533))
+ /gene="prpE"
+ /locus_tag="SARI_02554"
+ /note="active site"
+ /db_xref="CDD:213270"
+ misc_feature complement(order(2476532..2476534,2476550..2476552,
+ 2476742..2476750,2477165..2477167,2477234..2477236,
+ 2477243..2477248,2477408..2477410))
+ /gene="prpE"
+ /locus_tag="SARI_02554"
+ /note="CoA binding site [chemical binding]; other site"
+ /db_xref="CDD:213270"
+ gene complement(2478291..2479742)
+ /gene="prpD"
+ /locus_tag="SARI_02555"
+ CDS complement(2478291..2479742)
+ /gene="prpD"
+ /locus_tag="SARI_02555"
+ /inference="protein motif:HMMPanther:IPR005656"
+ /inference="protein motif:HMMPanther:IPR012705"
+ /inference="protein motif:HMMPfam:IPR005656"
+ /inference="protein motif:HMMTigr:IPR012705"
+ /inference="similar to AA sequence:REFSEQ:YP_151549.1"
+ /note="'functions in propionate metabolism; involved in
+ isomerization of (2S,3S)-methylcitrate to
+ (2R,3S)-methylisocitrate; also encodes minor aconitase or
+ dehydratase activity; aconitase C'"
+ /codon_start=1
+ /transl_table=11
+ /product="2-methylcitrate dehydratase"
+ /protein_id="YP_001571554.1"
+ /db_xref="GI:161504442"
+ /db_xref="InterPro:IPR005656"
+ /db_xref="InterPro:IPR012705"
+ /translation="MSTQQLNIRPQFDREIVDIVDYVMNYEITSKVAYDTAHYCLLDT
+ LGCGLEALEYPACKKLLGPIVPGTVVPNGARVPGTQFQLDPIQAAFNIGAMIRWLDFN
+ DTWLAAEWGHPSDNLGGILAIADWLSRNAVAAGKTPLTMKQVLTGMIKAHEIQGCIAL
+ ENAFNRVGLDHVLLVKVASTAVVAEMLGLTRDEILNAVSLAWVDGQSLRTYRHAPNTG
+ TRKSWAAGDATSRAVRLALMAKTGEMGYPSALTAKTWGFYDVSFKGEAFRFQRPYGAY
+ VMENVLFKISFPAEFHSQTAVEAAMTLYEQMQAAGKTAADIEKVTIRTHEACIRIIDK
+ KGPLNNPADRDHCIQYMVAVPLLFGRLTAADYEDELAQDKRIDALREKIVCYEDPAFT
+ ADYHDPEKRAIGNAITLEFTDGSRFEEVVVEYPIGHARRRADGIPKLIEKFKINLARQ
+ FPTRQQQRILDVSLDRSRLEQMPVNEYLDLYVI"
+ misc_feature complement(2478294..2479742)
+ /gene="prpD"
+ /locus_tag="SARI_02555"
+ /note="2-methylcitrate dehydratase; Provisional; Region:
+ prpD; PRK09425"
+ /db_xref="CDD:181845"
+ misc_feature complement(2478294..2479706)
+ /gene="prpD"
+ /locus_tag="SARI_02555"
+ /note="2-methylcitrate dehydratase; Region: prpD;
+ TIGR02330"
+ /db_xref="CDD:131383"
+ gene complement(2479782..2480951)
+ /locus_tag="SARI_02556"
+ CDS complement(2479782..2480951)
+ /locus_tag="SARI_02556"
+ /inference="protein motif:HMMPanther:IPR002020"
+ /inference="protein motif:HMMPfam:IPR002020"
+ /inference="protein motif:HMMTigr:IPR011278"
+ /inference="protein motif:ScanRegExp:IPR002020"
+ /inference="similar to AA sequence:SwissProt:Q56063"
+ /note="catalyzes the synthesis of 2-methylcitrate from
+ propionyl-CoA and oxaloacetate; also catalyzes the
+ condensation of oxaloacetate with acetyl-CoA but with a
+ lower specificity"
+ /codon_start=1
+ /transl_table=11
+ /product="methylcitrate synthase"
+ /protein_id="YP_001571555.1"
+ /db_xref="GI:161504443"
+ /db_xref="InterPro:IPR002020"
+ /db_xref="InterPro:IPR011278"
+ /translation="MSDTTILQNNNHVIKPKKSVALSGVPAGNTALCTVGKSGNDLHY
+ RGYDILDLAEHCEFEEVAHLLIHGKLPTRDELSAYKSKLKALRGLPANVRTVLEALPA
+ ASHPMDVMRTGVSALGCTLPEKEGHTVSGARDIADKLLASLSSILLYWYHYSYNGERI
+ QPETDDNSIGGHFLHLLHGEKPTQSWEKAMHISLVLYAEHEFNASTFTSRVIAGTGSD
+ VYSAIIGAIGALRGPKHGGANEVSLEIQQRYETPDEAEADIRKRVENKEVVIGFGHPV
+ YTIADPRHQVIKRVAKQLSEEGGSLKMYHIADRLETVMWETKKMFPNLDWFSAVSYNM
+ MGVPTEMFTPLFVIARVTGWAAHIIEQRKDNKIIRPSANYTGPDNRPFVAIDERC"
+ misc_feature complement(2479788..2480918)
+ /locus_tag="SARI_02556"
+ /note="Citrate synthase [Energy production and
+ conversion]; Region: GltA; COG0372"
+ /db_xref="CDD:223449"
+ misc_feature complement(2479797..2480894)
+ /locus_tag="SARI_02556"
+ /note="Subgroup of Escherichia coli (Ec) 2-methylcitrate
+ synthase (2MCS)_like. 2MCS catalyzes the condensation of
+ propionyl-coenzyme A (PrCoA) and oxalacetate (OAA) to form
+ 2-methylcitrate and coenzyme A (CoA) during propionate
+ metabolism. Citrate synthase (CS)...; Region:
+ Ec2MCS_like_1; cd06117"
+ /db_xref="CDD:99870"
+ misc_feature complement(order(2479824..2479856,2480127..2480129,
+ 2480250..2480261,2480265..2480270,2480289..2480291,
+ 2480298..2480309,2480316..2480318,2480328..2480333,
+ 2480340..2480354,2480463..2480465,2480607..2480609,
+ 2480616..2480618,2480628..2480630,2480640..2480642,
+ 2480664..2480669,2480676..2480681,2480865..2480879,
+ 2480886..2480894))
+ /locus_tag="SARI_02556"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:99870"
+ misc_feature complement(order(2479845..2479847,2479854..2479856,
+ 2479902..2479904,2479914..2479916,2479977..2479979,
+ 2479983..2479985,2479992..2479994,2479998..2480000,
+ 2480103..2480105,2480118..2480120,2480127..2480150,
+ 2480229..2480231,2480238..2480240,2480244..2480252,
+ 2480343..2480345,2480352..2480354,2480883..2480885))
+ /locus_tag="SARI_02556"
+ /note="active site"
+ /db_xref="CDD:99870"
+ misc_feature complement(order(2479902..2479904,2479983..2479985,
+ 2480103..2480105,2480127..2480141,2480145..2480150,
+ 2480247..2480252,2480343..2480345,2480352..2480354,
+ 2480883..2480885))
+ /locus_tag="SARI_02556"
+ /note="citrylCoA binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:99870"
+ misc_feature complement(order(2479845..2479847,2479902..2479904,
+ 2479914..2479916,2479977..2479979,2480103..2480105,
+ 2480130..2480132,2480244..2480249,2480343..2480345,
+ 2480352..2480354))
+ /locus_tag="SARI_02556"
+ /note="oxalacetate/citrate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:99870"
+ misc_feature complement(order(2479854..2479856,2479977..2479979,
+ 2479983..2479985,2479992..2479994,2479998..2480000,
+ 2480118..2480120,2480127..2480129,2480133..2480150,
+ 2480229..2480231,2480238..2480240,2480247..2480252))
+ /locus_tag="SARI_02556"
+ /note="coenzyme A binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:99870"
+ misc_feature complement(order(2479977..2479979,2480130..2480132,
+ 2480247..2480249))
+ /locus_tag="SARI_02556"
+ /note="catalytic triad [active]"
+ /db_xref="CDD:99870"
+ gene complement(2481063..2481947)
+ /gene="prpB"
+ /locus_tag="SARI_02557"
+ CDS complement(2481063..2481947)
+ /gene="prpB"
+ /locus_tag="SARI_02557"
+ /inference="protein motif:BlastProDom:IPR000918"
+ /inference="protein motif:HMMPfam:IPR000918"
+ /inference="protein motif:HMMTigr:IPR012695"
+ /inference="protein motif:ScanRegExp:IPR000918"
+ /inference="similar to AA sequence:INSD:AAX64315.1"
+ /note="catalyzes the formation of pyruvate and succinate
+ from 2-methylisocitrate"
+ /codon_start=1
+ /transl_table=11
+ /product="2-methylisocitrate lyase"
+ /protein_id="YP_001571556.1"
+ /db_xref="GI:161504444"
+ /db_xref="InterPro:IPR000918"
+ /db_xref="InterPro:IPR012695"
+ /translation="MSLHSPGQAFRAALTKENPLQIVGAINANHALLAQRAGYQAIYL
+ SGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCPLPLLVDADIGFGSSAFNVARTVK
+ AITKAGAGALHIEDQVGAKRCGHRPNKAIVSKEEMVDRIRAAVDARTDPNFVIMARTD
+ ALAVEGLEAALDRAQAYVDAGADMLFPEAITELSMYHQFADVAQVPILANITEFGATP
+ LFTTDELRSANVAMALYPLSAFRAMNRAAEKVYTVLRQEGTQKNVIDIMQTRNELYES
+ INYYQYEEKLDALYTKKS"
+ misc_feature complement(2481195..2481920)
+ /gene="prpB"
+ /locus_tag="SARI_02557"
+ /note="Members of the ICL/PEPM enzyme family catalyze
+ either P-C or C-C bond formation/cleavage. Known members
+ are phosphoenolpyruvate mutase (PEPM), phosphonopyruvate
+ hydrolase (PPH), carboxyPEP mutase (CPEP mutase),
+ oxaloacetate hydrolase (OAH), isocitrate...; Region:
+ ICL_PEPM; cd00377"
+ /db_xref="CDD:119340"
+ misc_feature complement(2481198..2481920)
+ /gene="prpB"
+ /locus_tag="SARI_02557"
+ /note="Phosphoenolpyruvate phosphomutase; Region:
+ PEP_mutase; pfam13714"
+ /db_xref="CDD:222337"
+ misc_feature complement(order(2481195..2481200,2481204..2481212,
+ 2481216..2481224,2481510..2481512,2481519..2481524,
+ 2481531..2481533,2481540..2481545,2481630..2481632,
+ 2481639..2481641,2481651..2481656,2481675..2481677,
+ 2481717..2481722,2481729..2481734,2481738..2481743,
+ 2481750..2481755,2481759..2481770,2481777..2481779,
+ 2481783..2481785,2481792..2481797,2481807..2481809,
+ 2481828..2481836,2481840..2481842,2481849..2481854,
+ 2481858..2481872,2481876..2481887,2481891..2481893,
+ 2481912..2481914))
+ /gene="prpB"
+ /locus_tag="SARI_02557"
+ /note="tetramer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:119340"
+ misc_feature complement(order(2481240..2481242,2481312..2481314,
+ 2481318..2481320,2481384..2481386,2481474..2481476,
+ 2481603..2481605,2481687..2481689,2481693..2481695,
+ 2481774..2481776,2481807..2481815,2481819..2481821))
+ /gene="prpB"
+ /locus_tag="SARI_02557"
+ /note="active site"
+ /db_xref="CDD:119340"
+ misc_feature complement(order(2481603..2481605,2481687..2481689,
+ 2481693..2481695,2481774..2481776))
+ /gene="prpB"
+ /locus_tag="SARI_02557"
+ /note="Mg2+/Mn2+ binding site [ion binding]; other site"
+ /db_xref="CDD:119340"
+ gene 2482213..2483838
+ /locus_tag="SARI_02558"
+ CDS 2482213..2483838
+ /locus_tag="SARI_02558"
+ /inference="protein motif:HMMPfam:IPR002078"
+ /inference="protein motif:HMMPfam:IPR002197"
+ /inference="protein motif:HMMPfam:IPR010524"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR012704"
+ /inference="protein motif:ScanRegExp:IPR001254"
+ /inference="protein motif:ScanRegExp:IPR002078"
+ /inference="protein motif:superfamily:IPR008931"
+ /inference="similar to AA sequence:INSD:CAD08822.1"
+ /note="'KEGG: reh:H16_A1904 1.5e-82 prpR; propionate
+ catabolism activator K01529;
+ COG: COG1221 Transcriptional regulators containing an
+ AAA-type ATPase domain and a DNA-binding domain;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571557.1"
+ /db_xref="GI:161504445"
+ /db_xref="InterPro:IPR001254"
+ /db_xref="InterPro:IPR002078"
+ /db_xref="InterPro:IPR002197"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR008931"
+ /db_xref="InterPro:IPR010524"
+ /db_xref="InterPro:IPR012704"
+ /translation="MATTHGAPRDNTDKPVIWTVSVTRLFELFRDISLEFDHLAAITP
+ IQLGFEKAVTYIRKKLATERCDAIIAAGSNGAYLKSRLSIPVILIKPSGFDVLQALAK
+ AGKLTSSIGIVTYQETIPALLAFQKTFHLCLEQRSYVTEEDARGQINELKANGIEAVV
+ GAGLITDLAEEAGMTAIFIYSAATVRQAFHDALDMTRLTRRQRVDYPSGKGLQTRYEL
+ GDIRGHSPQMEQVRQTITLYARSSAAVLIQGETGTGKELAAQAIHQTFFHRQPHRQNK
+ PSPPFVAVNCGAITESLLEAELFGYEEGAFTGSRRGGRAGLFEIAHGGTLFLDEIGEM
+ PLPLQTRLLRVLEEKAVTRVGGHQPIPVDVRVISATHCDLDREIMQGRFRPDLFYRLS
+ ILRLTLPPLRERQADILPLAESFLKQSLAAMEIPFTESIRRGLTQCQPLLLAYHWPGN
+ IRELRNMMERLALFLSVDPAPMLDKQFIRQRLPELMENTAELTPPIVEALTLQDVLSR
+ FNGDKTATARYLGISRTTLWRRLKRCAKKPSGN"
+ misc_feature 2482213..2483826
+ /locus_tag="SARI_02558"
+ /note="propionate catabolism operon regulatory protein
+ PrpR; Provisional; Region: PRK15424"
+ /db_xref="CDD:237963"
+ misc_feature 2482303..2482812
+ /locus_tag="SARI_02558"
+ /note="Propionate catabolism activator; Region: PrpR_N;
+ pfam06506"
+ /db_xref="CDD:219065"
+ misc_feature 2482888..2483412
+ /locus_tag="SARI_02558"
+ /note="The AAA+ (ATPases Associated with a wide variety of
+ cellular Activities) superfamily represents an ancient
+ group of ATPases belonging to the ASCE (for additional
+ strand, catalytic E) division of the P-loop NTPase fold.
+ The ASCE division also includes ABC; Region: AAA; cd00009"
+ /db_xref="CDD:99707"
+ misc_feature 2482957..2482980
+ /locus_tag="SARI_02558"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature order(2482960..2482983,2483197..2483199,2483323..2483325)
+ /locus_tag="SARI_02558"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:99707"
+ misc_feature 2483185..2483202
+ /locus_tag="SARI_02558"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature 2483380..2483382
+ /locus_tag="SARI_02558"
+ /note="arginine finger; other site"
+ /db_xref="CDD:99707"
+ misc_feature 2483701..2483811
+ /locus_tag="SARI_02558"
+ /note="Bacterial regulatory protein, Fis family; Region:
+ HTH_8; pfam02954"
+ /db_xref="CDD:202485"
+ gene complement(2483910..2484185)
+ /locus_tag="SARI_02559"
+ CDS complement(2483910..2484185)
+ /locus_tag="SARI_02559"
+ /inference="protein motif:HMMPfam:IPR010854"
+ /inference="similar to AA sequence:INSD:AAL19320.1"
+ /note="'COG: NOG14127 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571558.1"
+ /db_xref="GI:161504446"
+ /db_xref="InterPro:IPR010854"
+ /translation="MKTGYKVMLGVLAFAVTNAYAAEMMKKTEFDKVASQYTKIGTIS
+ TTGEMSPLDAREDLIKKADEKGADVVVLTSGQTENKIHGTADIYKKK"
+ misc_feature complement(2483913..2484185)
+ /locus_tag="SARI_02559"
+ /note="hypothetical protein; Provisional; Region:
+ PRK09929"
+ /db_xref="CDD:182151"
+ gene 2484416..2485048
+ /locus_tag="SARI_02560"
+ CDS 2484416..2485048
+ /locus_tag="SARI_02560"
+ /inference="protein motif:HMMPfam:IPR001123"
+ /inference="protein motif:HMMTigr:IPR004778"
+ /inference="similar to AA sequence:INSD:AAL19319.1"
+ /note="'COG: COG1280 Putative threonine efflux protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571559.1"
+ /db_xref="GI:161504447"
+ /db_xref="InterPro:IPR001123"
+ /db_xref="InterPro:IPR004778"
+ /translation="MEPFHGVVLTVSLFVLTFFNPGANLFVVVQTSLASGRRAGVITG
+ LGVATGDAFYSGLGLFGLATLITQCEAVFSLIKIVGGAYLLWFAWNSIRHQATPQMST
+ LQAPIAAPWTIFFRRGLMTDLSNPQTVLFFISIFSVTLSAETPTWARLMAWGGIVLSS
+ VIWRIFLSQAFSLPAVRRAYGRIQRIASRVIGAIIGIFALRLLYEGVTRR"
+ misc_feature 2484473..2485021
+ /locus_tag="SARI_02560"
+ /note="The Resistance to Homoserine/Threonine (RhtB)
+ Family protein; Region: 2A76; TIGR00949"
+ /db_xref="CDD:233204"
+ gene complement(2485105..2485236)
+ /locus_tag="SARI_02561"
+ CDS complement(2485105..2485236)
+ /locus_tag="SARI_02561"
+ /note="'Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571560.1"
+ /db_xref="GI:161504448"
+ /translation="MAQVKKWSRRVVWMVAIWCASVLLLAGVGMLFRLLMTSAGFRS"
+ misc_feature complement(2485108..2485224)
+ /locus_tag="SARI_02561"
+ /note="Protein of unknown function (DUF2474); Region:
+ DUF2474; pfam10617"
+ /db_xref="CDD:204535"
+ gene complement(2485236..2486246)
+ /locus_tag="SARI_02562"
+ CDS complement(2485236..2486246)
+ /locus_tag="SARI_02562"
+ /inference="protein motif:HMMPfam:IPR003317"
+ /inference="protein motif:HMMTigr:IPR003317"
+ /inference="similar to AA sequence:INSD:AAL19315.1"
+ /note="'KEGG: stm:STM0361 3.9e-178 cytochrome BD2 subunit
+ II K00426;
+ COG: COG1294 Cytochrome bd-type quinol oxidase, subunit 2;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571561.1"
+ /db_xref="GI:161504449"
+ /db_xref="InterPro:IPR003317"
+ /translation="MTIDLPVIWFAIIVFATLMYIVMDGFDLGVGILFPFIRDKHDRD
+ VMVNSVAPVWDGNETWLVLGGAGLFGAFPLAYAVIADALTIPLVIMLLGLIFRGVAFE
+ FRFKATESHRAFWDKSFIAGSILATFAQGVVVGAVVSGFQVEGRTFSGSQLGWLTPFN
+ LFCGVGLVVTYALLGATWLIMKSEDPLHSRMCELSRPLLIVLLLVMGGVSAWTPLTHD
+ DIAERWFTLPNLYYFLPVPVLVLAFSVWLWRSVKKPESHARPFILTLGLIFLGFSGLG
+ ISIWPNIIPPDISLYAASAPPQSQGFMLVGALVIIPVILAYTFWSYYVFRGKVRHGEG
+ YH"
+ misc_feature complement(2485269..2486237)
+ /locus_tag="SARI_02562"
+ /note="Cytochrome oxidase subunit II; Region: Cyto_ox_2;
+ pfam02322"
+ /db_xref="CDD:216972"
+ misc_feature complement(<2485677..2486234)
+ /locus_tag="SARI_02562"
+ /note="cytochrome d ubiquinol oxidase subunit 2;
+ Provisional; Region: PRK15003; cl12219"
+ /db_xref="CDD:187194"
+ misc_feature complement(2485260..>2485388)
+ /locus_tag="SARI_02562"
+ /note="cytochrome d ubiquinol oxidase subunit 2;
+ Provisional; Region: PRK15003; cl12219"
+ /db_xref="CDD:187194"
+ gene complement(2486243..2487646)
+ /locus_tag="SARI_02563"
+ CDS complement(2486243..2487646)
+ /locus_tag="SARI_02563"
+ /inference="protein motif:HMMPfam:IPR002585"
+ /inference="similar to AA sequence:INSD:AAX64307.1"
+ /note="'KEGG: stm:STM0360 1.1e-251 cytochrome BD2 subunit
+ I K00425;
+ COG: COG1271 Cytochrome bd-type quinol oxidase, subunit 1;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571562.1"
+ /db_xref="GI:161504450"
+ /db_xref="InterPro:IPR002585"
+ /translation="MEFDAFFLARLQFAFTVSFHIIFPAITIGLASYLVVLEGLWLKT
+ RNPVWRSLYQFWLKIFAVNFGMGVVSGLVMAYQFGTNWSGFSQFAGSITGPLLTYEVL
+ TAFFLEAGFLGVMLFGWNKVGPGLHFLSTCMVALGTLISTFWILASNSWMHTPQGFEI
+ HDGQVVPADWFAVIFNPSFPYRLLHMSVAAFLSSAMFVGASAAWHLLKGNDTPAIRRM
+ FSMALWMAVVVAPVQALIGDMHGLNTLKHQPVKIAAIEGHWENTPGEPTPLTLVGWPD
+ MKAERTRYALEIPALGSLILTHSLDKQVPALKDYPKEDRPNSTVVFWSFRIMVGMGVL
+ MILLGLASLWLRYRHRLYHSRPFMHFALWMGPSGLIAILAGWVTTEVGRQPWVVYGLL
+ RTRDAVSAHSTLQMSISFLAFFVVYSLVFGVGYIYMIRLIQKGPQPAEIPTAETDGRP
+ ARPISAVGESLEQEKRE"
+ misc_feature complement(2486333..2487625)
+ /locus_tag="SARI_02563"
+ /note="Bacterial Cytochrome Ubiquinol Oxidase; Region:
+ Bac_Ubq_Cox; pfam01654"
+ /db_xref="CDD:216630"
+ gene complement(2488141..2491116)
+ /locus_tag="SARI_02564"
+ CDS complement(2488141..2491116)
+ /locus_tag="SARI_02564"
+ /inference="protein motif:HMMPfam:IPR006935"
+ /note="'KEGG: spt:SPA2365 0. res; DNA restriction (DNA
+ helicase K01156;
+ COG: COG3587 Restriction endonuclease;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571563.1"
+ /db_xref="GI:161504451"
+ /db_xref="InterPro:IPR006935"
+ /db_xref="REBASE:StyAZORF2565P"
+ /translation="MTMNILLEELPHQEQALAAILASFTGIDHAQVDHNHYANPLING
+ RYDDKANIDVKMETGTGKTYVYTRLMYELHQKYGLFKFVLVVPTPAIKEGARNFITSD
+ YARQHFSQFYENTRMELCTINAGDFKVKSGRKNFPAQLLSFTDASRRDSHTIQVLLIN
+ AQMLNSASMTRDDYDQTLLGGLTSPVKGLQMTRPVVIIDEPHRFARDNKFYRAIQAIQ
+ PQMIVRFGATFPDIVEGKGKNKCVRKDYYRRKPQFDLNAVDSFNDGLVKGIDIYYPNL
+ PEEQANNRYIVDSVTAKKLILRRGSKIAEVGVGENLADVDAGFEGSIEYAGSKMLSND
+ LELEAGMALVPGTFGASYQELIIQNAIDKHFDIEQANFLRSNEQENNAPRIKTLSLFF
+ IDSIKSYRDDEGWLKVTFERLLKKKLTQLIDDYQRKTLPREVEYLSFLQATLASLHSD
+ NQNVHAGYFGEDRGSGDEAIQAEVDDILKYKEKLLSFSDHHGNWETRRFLFSKWTLRE
+ GWDNPNVFVIAKLRSSGSESSKIQEVGRGLRLPVDENGHRVQQEEWPSRLAFLIGYDE
+ KTFASMLVDEINRDSKVQLNEQKLDEAMITLIVTERQKVDPTFTELRLLEDLDDKKLI
+ NRSNEFKPSVTFNGETKSGFAWLLEFYPELTQARVRADRIRDNKPASRLRVRLRKENW
+ EQLSGIWEQFSRRYMLQFERSGSSLEQIAAGVLRDPTLYVRQKPSQMQQRLVSNEDNG
+ RFEVAQREGELAASEFMAGMKYGHFLKQLALRTSLSVNVLHPVLMAMLRDVLHGDSRY
+ LSEISLDNMTRALQARINAHFAQRHDYLPLDFQASTSVFDSTARQFREEISAEIVGKN
+ VDENAIDDPRSLYQIPPLRYDSVDPELPLLKYHYPQQVSVFGKLPKRAIQIPKYTGGS
+ TTPDFVYRIERQDADSVYLLVETKAENMRVGDHVILDAQRKFFDMLRRQNINVEFAEA
+ TSAPAVFSTINGLIEGKVN"
+ misc_feature complement(2488150..2491110)
+ /locus_tag="SARI_02564"
+ /note="type III restriction-modification system StyLTI
+ enzyme res; Provisional; Region: PRK15483"
+ /db_xref="CDD:237972"
+ misc_feature complement(<2490820..2491101)
+ /locus_tag="SARI_02564"
+ /note="Type III restriction enzyme, res subunit; Region:
+ ResIII; pfam04851"
+ /db_xref="CDD:218292"
+ misc_feature complement(2490424..>2490534)
+ /locus_tag="SARI_02564"
+ /note="DEAD-like helicases superfamily. A diverse family
+ of proteins involved in ATP-dependent RNA or DNA
+ unwinding. This domain contains the ATP-binding region;
+ Region: DEXDc; cl17251"
+ /db_xref="CDD:247805"
+ misc_feature complement(2488213..2488506)
+ /locus_tag="SARI_02564"
+ /note="VRR-NUC domain; Region: VRR_NUC; pfam08774"
+ /db_xref="CDD:220012"
+ gene complement(2491123..2493081)
+ /locus_tag="SARI_02565"
+ CDS complement(2491123..2493081)
+ /locus_tag="SARI_02565"
+ /inference="protein motif:HMMPfam:IPR002941"
+ /inference="protein motif:ScanRegExp:IPR001917"
+ /inference="protein motif:ScanRegExp:IPR002052"
+ /note="'KEGG: sty:STY0388 0. mod; type III
+ restriction-modification system StyLTI enzyme mod K07316;
+ COG: COG2189 Adenine specific DNA methylase Mod;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571564.1"
+ /db_xref="GI:161504452"
+ /db_xref="InterPro:IPR001917"
+ /db_xref="InterPro:IPR002052"
+ /db_xref="InterPro:IPR002941"
+ /translation="MLKDNQKHNESVAPNSAFLSELQRALPEFFIADRYDEQGELIAK
+ GGFDLARFERALKERNINELTSGYQIDFIGKDYAKKQAGEKSVTVIVPDVEHNTLAVN
+ KNSHNLFLTGDNLDVLRHLQNNYADTVDMIYIDPPYNTGSDGFVYPDHFEYSDRALQD
+ MFGLNDTELARLKSIQGKSTHSAWLSFMYPRLFLARKLLKDTGFIFISIDDNEHANLK
+ LMMDEIFGEGGFVTNVMWKRKKEISNDSDNVSTQGEYILVYAKTGQGALRLEPLSKEY
+ IQKSYKEPTEQFPDGKWRPVPLTVSKGLSGGGYTYKITTPNGTVHKRLWAYPEASYQK
+ LVADNLVYFGKDNGGIPQRVMYAHHSKGQPTTNYWDNVASNKEGKKEILDLFGDNVFD
+ TPKPTALLKKIIKLAIDKNGIVLDFFAGSGTTAHAVMALNEEDGGQRAFILCTLDQTL
+ NHNTIAKKAGYNTIDEISRDRIKRVAAKIRANNPATNGDLGFKHYRFATPTQQTLDDL
+ DSFDIATGHFINSSGQLVAFTESGFTDMINPFSARGLGVPGGASGEATILTTWLVTDG
+ YKMDIDVQAIDFSGYRAMYVDNTRLYLIDERWGTEQTRDLLNRMGMHQLPVQTIVIYG
+ YSFDLESIRELEIGLKQLDQKVNLVKRY"
+ misc_feature complement(2491204..2493072)
+ /locus_tag="SARI_02565"
+ /note="Adenine specific DNA methylase Mod [DNA
+ replication, recombination, and repair]; Region: COG2189"
+ /db_xref="CDD:225100"
+ misc_feature complement(<2492644..2492772)
+ /locus_tag="SARI_02565"
+ /note="DNA methylase; Region: N6_N4_Mtase; cl17433"
+ /db_xref="CDD:247987"
+ misc_feature complement(2491750..2492697)
+ /locus_tag="SARI_02565"
+ /note="DNA methylase; Region: N6_N4_Mtase; pfam01555"
+ /db_xref="CDD:216568"
+ gene complement(2493270..2494523)
+ /locus_tag="SARI_02566"
+ CDS complement(2493270..2494523)
+ /locus_tag="SARI_02566"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="protein motif:ScanRegExp:IPR005829"
+ /inference="similar to AA sequence:REFSEQ:NP_454952.1"
+ /note="'KEGG: cal:orf19.3668 1.4e-07 HGT2; hexose
+ transporter K01804;
+ COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571565.1"
+ /db_xref="GI:161504453"
+ /db_xref="InterPro:IPR005829"
+ /db_xref="InterPro:IPR011701"
+ /translation="MYTPLNWTMTQRHVAFASFTSWMLDAFDFFILVFVLSDLAEWFH
+ ASVSDVSIAIMLTLAVRPIGALLFGRMAEKYGRRPILMLNILFFTVFELLSAWSPTFM
+ AFLIFRVMYGVAMGGIWGVASSLAMETIPDRSRGLMSGIFQAGYPCGYLFASVIFGLF
+ YSMVGWRGMFLIGALPIVLLPYIWFKVPESPVWLAARARKENTALLPVLRKQWKLCLY
+ LVLVMAFFNFFSHGTQDLYPTFLKMQHGFDPHLISIIAIFYNIAAMLGGIFYGTLSER
+ IGRKKAIMIAAFLALPVLPLWAFSSGSFTIGLGAFLMQFMVQGAWGVVPTWLNELVPA
+ NARAVLPGFVYQLGNLLASVNATLQARIAETHGGNYGLAMAIVAGAVAILICVFVAFG
+ RETRGVVISGTDSDSLPESAVGHRT"
+ misc_feature complement(2493381..2494502)
+ /locus_tag="SARI_02566"
+ /note="putative sialic acid transporter; Region: 2A0112;
+ TIGR00891"
+ /db_xref="CDD:233172"
+ misc_feature complement(2493354..2494478)
+ /locus_tag="SARI_02566"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature complement(order(2493468..2493470,2493477..2493482,
+ 2493489..2493494,2493501..2493506,2493537..2493539,
+ 2493546..2493551,2493561..2493563,2493570..2493575,
+ 2493582..2493584,2493723..2493725,2493735..2493737,
+ 2493744..2493746,2493756..2493758,2493768..2493770,
+ 2493810..2493812,2493819..2493824,2493831..2493836,
+ 2493843..2493845,2494074..2494076,2494092..2494097,
+ 2494104..2494109,2494143..2494145,2494152..2494157,
+ 2494164..2494169,2494176..2494181,2494317..2494322,
+ 2494326..2494331,2494341..2494343,2494350..2494355,
+ 2494362..2494364,2494413..2494418,2494422..2494430,
+ 2494437..2494439))
+ /locus_tag="SARI_02566"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene complement(2494441..2494596)
+ /locus_tag="SARI_02567"
+ CDS complement(2494441..2494596)
+ /locus_tag="SARI_02567"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571566.1"
+ /db_xref="GI:161504454"
+ /translation="MTMGEFLFASPRQSLMLFLMQDITYVHSPELDDDTTACGVCQLY
+ QLDAGCV"
+ gene complement(2494823..2494972)
+ /locus_tag="SARI_02568"
+ CDS complement(2494823..2494972)
+ /locus_tag="SARI_02568"
+ /inference="similar to AA sequence:INSD:AAX64302.1"
+ /note="'COG: COG2608 Copper chaperone;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571567.1"
+ /db_xref="GI:161504455"
+ /translation="MVKKMILALDANATVRTDPVTRLVEVETSLSGEQMAIALQKTGF
+ LPNDL"
+ gene 2495016..2495243
+ /locus_tag="SARI_02569"
+ CDS 2495016..2495243
+ /locus_tag="SARI_02569"
+ /note="'COG: NOG27432 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571568.1"
+ /db_xref="GI:161504456"
+ /translation="MMNPFCVGTVASLGLASVGRPSVISGLTDAAVNHRLKDLRNVLH
+ ILDAPDQLIDRCLRQAFDVNTLPRLVIPKIQ"
+ gene 2496869..2497762
+ /locus_tag="SARI_02570"
+ CDS 2496869..2497762
+ /locus_tag="SARI_02570"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="protein motif:HMMPfam:IPR005119"
+ /inference="similar to AA sequence:REFSEQ:NP_459836.1"
+ /note="'KEGG: shn:Shewana3_3435 3.1e-18 transcriptional
+ regulator, LysR family K06022;
+ COG: COG0583 Transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571569.1"
+ /db_xref="GI:161504457"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR005119"
+ /db_xref="InterPro:IPR011991"
+ /translation="MHFDIKDLKLFLAISEEGSLTRGSEKTYMSAASGCVRIRNLEQS
+ INLRLLYRSSKGVTLSPAGETFKHHASLIVNQMEMLRSDMQEHVKGIKGHVKIFSSIT
+ AIAEYLPPLLGHFLTLYNDVNIDLREYPSPEIVRSVIEGRTDLGIVAGNITTDNLEIL
+ PFRTDRLVLITATDHPFADRKSVTFLELMEYEQISLPEGTGMFEFIRKKAELVQSKLK
+ IRIQVGNFETFCRMVEAKVGIGIMPHSAASRLRQLHEFAIIDLDDPWSLRKLQLCARS
+ FNKLPGYTQKLVAMLIPQTER"
+ misc_feature 2496875..2497759
+ /locus_tag="SARI_02570"
+ /note="Transcriptional regulator [Transcription]; Region:
+ LysR; COG0583"
+ /db_xref="CDD:223656"
+ misc_feature 2496881..2497060
+ /locus_tag="SARI_02570"
+ /note="Bacterial regulatory helix-turn-helix protein, lysR
+ family; Region: HTH_1; pfam00126"
+ /db_xref="CDD:215735"
+ misc_feature 2497148..2497741
+ /locus_tag="SARI_02570"
+ /note="The C-terminal substrate binding domain of an
+ uncharacterized LysR-type transcriptional regulator,
+ contains the type 2 periplasmic binding fold; Region:
+ PBP2_LTTR_like_1; cd08421"
+ /db_xref="CDD:176113"
+ misc_feature order(2497193..2497198,2497202..2497207,2497214..2497216,
+ 2497226..2497228,2497232..2497252,2497526..2497543,
+ 2497559..2497564,2497568..2497573)
+ /locus_tag="SARI_02570"
+ /note="putative dimerization interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:176113"
+ gene complement(2497765..2499450)
+ /locus_tag="SARI_02571"
+ CDS complement(2497765..2499450)
+ /locus_tag="SARI_02571"
+ /inference="protein motif:FPrintScan:IPR003042"
+ /inference="protein motif:FPrintScan:IPR013027"
+ /inference="protein motif:HMMPfam:IPR006076"
+ /inference="protein motif:HMMPfam:IPR007859"
+ /inference="similar to AA sequence:REFSEQ:YP_215839.1"
+ /note="'KEGG: sec:SC0852 3.3e-291 etfD; putative
+ dehydrogenase (flavoproteins) K00311;
+ COG: COG0644 Dehydrogenases (flavoproteins);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571570.1"
+ /db_xref="GI:161504458"
+ /db_xref="InterPro:IPR003042"
+ /db_xref="InterPro:IPR006076"
+ /db_xref="InterPro:IPR007859"
+ /db_xref="InterPro:IPR013027"
+ /translation="MNDTLSNTRQSRETIECDVLIVGAGPAGLSAALRLKLQANDAGK
+ ELSIIVLDKGSEPGSHILSGAVMDPRALNELIPDWQERGAPIKQPVTQDKLLLLMNEK
+ SINIPDALIPDNFRNHGNFIISLGNLIKWLADQAETAGVDIYAGFSAAEILYDQDANI
+ IGVATGDMGRHRDGSMKEGFQSGMEILAKYTVFAEGARGHLAKELIKKFHLDTGKAPP
+ SFSIGIKELWEVPSDQSRPGLVIHTTGWPLDKESFGGGFLYHLNDNKIALGLVVGLDY
+ SNPWLNPFQEMQRLKTHPSIRKYIDQGRRIGYGARAINNGGIPSMPDPCLPGGLLIGC
+ NAGTLNASRIKGIHTAIKSGMIAADAIFNALLDNRKNDLLTEYQTLLQQSWLWQELEN
+ GSNFKPWFKKGHMVGFIMAGIEHWLLPRLGIKKIPWRVKNNQPDNVTLRPASTSQRKV
+ YDKPDGKLTFDILSSVYLSNTCHDEDQPVHLKISDQNIPISINLNIYGGPEARYCPAG
+ VYEFLQDGETQNIRLQINSQNCIHCKTCDIKDPKQNITWTTPEGGSGPNYTGM"
+ misc_feature complement(2498032..2499411)
+ /locus_tag="SARI_02571"
+ /note="Dehydrogenases (flavoproteins) [Energy production
+ and conversion]; Region: FixC; COG0644"
+ /db_xref="CDD:223717"
+ misc_feature complement(<2499265..2499393)
+ /locus_tag="SARI_02571"
+ /note="NAD(P)-binding Rossmann-like domain; Region:
+ NAD_binding_8; cl17500"
+ /db_xref="CDD:248054"
+ misc_feature complement(2497903..2498244)
+ /locus_tag="SARI_02571"
+ /note="Electron transfer flavoprotein-ubiquinone
+ oxidoreductase; Region: ETF_QO; pfam05187"
+ /db_xref="CDD:218485"
+ misc_feature complement(2497777..2498076)
+ /locus_tag="SARI_02571"
+ /note="Ferredoxin-like protein [Energy production and
+ conversion]; Region: FixX; COG2440"
+ /db_xref="CDD:225289"
+ gene complement(2499651..2499869)
+ /locus_tag="SARI_02572"
+ CDS complement(2499651..2499869)
+ /locus_tag="SARI_02572"
+ /inference="protein motif:HMMPanther:IPR003673"
+ /inference="similar to AA sequence:INSD:EAU17569.1"
+ /note="'KEGG: fra:Francci3_2429 1.2e-10 L-carnitine
+ dehydratase/bile acid-inducible protein F K07749;
+ COG: COG1804 Predicted acyl-CoA transferases/carnitine
+ dehydratase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571571.1"
+ /db_xref="GI:161504459"
+ /db_xref="InterPro:IPR003673"
+ /translation="MKQLPLPEVIIVLIEHAIASPFCTRQLADYGTWVIKIEHPEGGD
+ FARNCEKKIIDNSHISFLSGKESQIYIF"
+ misc_feature complement(<2499729..2499857)
+ /locus_tag="SARI_02572"
+ /note="Predicted acyl-CoA transferases/carnitine
+ dehydratase [Energy production and conversion]; Region:
+ CaiB; COG1804"
+ /db_xref="CDD:224717"
+ gene complement(2499893..2501056)
+ /locus_tag="SARI_02573"
+ CDS complement(2499893..2501056)
+ /locus_tag="SARI_02573"
+ /inference="protein motif:Gene3D:IPR006091"
+ /inference="protein motif:Gene3D:IPR013764"
+ /inference="protein motif:Gene3D:IPR013786"
+ /inference="protein motif:HMMPfam:IPR006090"
+ /inference="protein motif:HMMPfam:IPR006091"
+ /inference="protein motif:HMMPfam:IPR006092"
+ /inference="protein motif:ScanRegExp:IPR006089"
+ /inference="protein motif:superfamily:IPR009075"
+ /inference="protein motif:superfamily:IPR009100"
+ /inference="similar to AA sequence:INSD:AAL19793.1"
+ /note="'KEGG: stm:STM0857 4.8e-203 putative acyl-CoA
+ dehydrogenase K00249;
+ COG: COG1960 Acyl-CoA dehydrogenases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571572.1"
+ /db_xref="GI:161504460"
+ /db_xref="InterPro:IPR006089"
+ /db_xref="InterPro:IPR006090"
+ /db_xref="InterPro:IPR006091"
+ /db_xref="InterPro:IPR006092"
+ /db_xref="InterPro:IPR009075"
+ /db_xref="InterPro:IPR009100"
+ /db_xref="InterPro:IPR013764"
+ /db_xref="InterPro:IPR013786"
+ /translation="MKSIEKDKNQDIRDAVRSLCSEFDDKYHRRIDETKSYPEEFVNT
+ LTKAGWLAALIPEEFGGSGLGLTEASIIMEEINRSGGNSGACHGQMYNMNTLLRHGSD
+ KQKQFWLPRIASGEWRLQSMGVTEPTTGTDTTRIKTTAVKKGDRYVINGQKVWISRVQ
+ HSDWMILLVRTTPLGDVKRKSEGMSIFMVDIKEAMKNGMTVQPIPNMVNHETNELFFD
+ NLEIPEENLIGEEGMGFHYILDGLNAERTLIAAECIGDGYWFIDRVTRYTCEREVFGR
+ PIGQNQGVQFPIAEAFIGVEAANLMRFKACELFDQKLSCGAQANMAKYLAAKASWEAA
+ NACLQFHGGYGFACEYDIERKFRETRLYQVAPISTNLILSYIAEHVLEMPRSF"
+ misc_feature complement(2499896..2501038)
+ /locus_tag="SARI_02573"
+ /note="Acyl-CoA dehydrogenases [Lipid metabolism]; Region:
+ CaiA; COG1960"
+ /db_xref="CDD:224871"
+ misc_feature complement(2499911..2501038)
+ /locus_tag="SARI_02573"
+ /note="Acyl-CoA dehydrogenase; Region: ACAD; cl09933"
+ /db_xref="CDD:245208"
+ misc_feature complement(order(2499947..2499949,2499953..2499955,
+ 2499959..2499967,2500586..2500588,2500592..2500594,
+ 2500685..2500687,2500691..2500693,2500787..2500789))
+ /locus_tag="SARI_02573"
+ /note="active site"
+ /db_xref="CDD:173838"
+ gene complement(2501066..2501911)
+ /locus_tag="SARI_02574"
+ CDS complement(2501066..2501911)
+ /locus_tag="SARI_02574"
+ /inference="similar to AA sequence:REFSEQ:YP_524721.1"
+ /note="'COG: COG3777 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571573.1"
+ /db_xref="GI:161504461"
+ /translation="MQDTDIQIWRPGILRNTDYLNPGPAKLLAATLDKDIENFKEGTI
+ LPELWHWLYFLPADRQSDLSVDGHPIKGHFLPPVDLPRRMWASSQMTWNSSFLLGEKV
+ EKTSRVKEILEKRGSSGKLVFVNVEHLYRSNERDIMTEVHTIVYCEAVTSHKKHKKKA
+ SYDVPQEQFSHKIKPDPPLLFRYSALTFNTHRIHYDLDYVRNEEGYPGLVVQGPLTAT
+ LLVDLLKNNRPDVTIRNLQFRAISPLFSPDPIRLCGRVDGDVATLWAAGPDNYISMKA
+ TVLVY"
+ misc_feature complement(2501075..2501863)
+ /locus_tag="SARI_02574"
+ /note="Uncharacterized conserved protein [Function
+ unknown]; Region: COG3777"
+ /db_xref="CDD:226300"
+ misc_feature complement(2501072..2501413)
+ /locus_tag="SARI_02574"
+ /note="The hotdog fold was initially identified in the E.
+ coli FabA (beta-hydroxydecanoyl-acyl carrier protein
+ (ACP)-dehydratase) structure and subsequently in 4HBT
+ (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A
+ number of other seemingly unrelated...; Region: hot_dog;
+ cl00509"
+ /db_xref="CDD:241913"
+ misc_feature complement(order(2501183..2501194,2501273..2501278))
+ /locus_tag="SARI_02574"
+ /note="active site 2 [active]"
+ /db_xref="CDD:239524"
+ misc_feature complement(order(2501210..2501218,2501237..2501239,
+ 2501246..2501251,2501258..2501260))
+ /locus_tag="SARI_02574"
+ /note="active site 1 [active]"
+ /db_xref="CDD:239524"
+ gene complement(2501944..2502885)
+ /locus_tag="SARI_02575"
+ CDS complement(2501944..2502885)
+ /locus_tag="SARI_02575"
+ /inference="protein motif:HMMPfam:IPR000049"
+ /inference="protein motif:HMMPfam:IPR001308"
+ /inference="protein motif:HMMPIR:IPR001308"
+ /inference="protein motif:ScanRegExp:IPR001308"
+ /inference="similar to AA sequence:REFSEQ:NP_459833.1"
+ /note="'KEGG: fnu:FN1424 3.3e-23 acyl-CoA dehydrogenase,
+ short-chain specific K00248;
+ COG: COG2025 Electron transfer flavoprotein, alpha
+ subunit;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571574.1"
+ /db_xref="GI:161504462"
+ /db_xref="InterPro:IPR000049"
+ /db_xref="InterPro:IPR001308"
+ /translation="MASLVIAEHNGNILLPSTLSTITAAKAIDSDIDILMLGYGIENI
+ AVKASHIQGVSTVFVADGALFEHILAENVEKQICYFLNRDKNHYQSILFPASSFGKNC
+ APRLAAKLDVSQISDITRVIDQHTFERPIYAGSAIATVHSDDEYKVITVRPTAFAAAE
+ EGGKAPIASTEVVTGSDQVKFISQDVNKSNRPDLQSARVVVSGGRGVGSAQAFKELVE
+ NLADKLGAAVGASRAAVDAGYAPNDYQVGQTGKIVAPQLYIALGISGAIQHLAGMKES
+ GIIVAINKDPDAPIFSIADYGLVADIFKAVPELIDKL"
+ misc_feature complement(2501947..2502885)
+ /locus_tag="SARI_02575"
+ /note="Electron transfer flavoprotein, alpha subunit
+ [Energy production and conversion]; Region: FixB; COG2025"
+ /db_xref="CDD:224936"
+ misc_feature complement(2502370..2502876)
+ /locus_tag="SARI_02575"
+ /note="The electron transfer flavoprotein (ETF) serves as
+ a specific electron acceptor for various mitochondrial
+ dehydrogenases. ETF transfers electrons to the main
+ respiratory chain via ETF-ubiquinone oxidoreductase. ETF
+ is an heterodimer that consists of an...; Region:
+ ETF_alpha; cd01715"
+ /db_xref="CDD:238848"
+ misc_feature complement(2502058..>2502243)
+ /locus_tag="SARI_02575"
+ /note="Electron transfer flavoprotein FAD-binding domain;
+ Region: ETF_alpha; pfam00766"
+ /db_xref="CDD:189709"
+ gene complement(2502896..2503660)
+ /locus_tag="SARI_02576"
+ CDS complement(2502896..2503660)
+ /locus_tag="SARI_02576"
+ /inference="protein motif:BlastProDom:IPR000049"
+ /inference="protein motif:HMMPfam:IPR000049"
+ /inference="protein motif:HMMPIR:IPR012255"
+ /inference="protein motif:ScanRegExp:IPR000049"
+ /inference="similar to AA sequence:INSD:AAX64754.1"
+ /note="'COG: COG2086 Electron transfer flavoprotein, beta
+ subunit;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571575.1"
+ /db_xref="GI:161504463"
+ /db_xref="InterPro:IPR000049"
+ /db_xref="InterPro:IPR012255"
+ /translation="MKESLMKVLVCVKQVVDHNVRIRIKQDHSDVDISDCKLSINPFD
+ EIAVEEAVRLKERGVISEIVAVSIGYKGVGDVLRTALAYGADRAIHILTEKSLDPLIV
+ AKTITAITKNEKPDIILLGKQAIDDDCNQVGQMLAALLDLPQATNISKVTVSDNLLTA
+ VREIDGGAETLSLSLPAVLTTDLRLNTPRNISLPNFIKAKKKTVEEINFDSLGISPSS
+ KLTTIKVDEPATREAGIIVPDISTLLNKLKNEEKII"
+ misc_feature complement(2503037..2503642)
+ /locus_tag="SARI_02576"
+ /note="The electron transfer flavoprotein (ETF) serves as
+ a specific electron acceptor for various mitochondrial
+ dehydrogenases. ETF transfers electrons to the main
+ respiratory chain via ETF-ubiquinone oxidoreductase. ETF
+ is an heterodimer that consists of an...; Region:
+ ETF_beta; cd01714"
+ /db_xref="CDD:238847"
+ misc_feature complement(order(2503265..2503276,2503289..2503294,
+ 2503298..2503303,2503457..2503459,2503529..2503531,
+ 2503538..2503540,2503625..2503630))
+ /locus_tag="SARI_02576"
+ /note="Ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:238847"
+ misc_feature complement(2503097..2503546)
+ /locus_tag="SARI_02576"
+ /note="Electron transfer flavoprotein domain; Region: ETF;
+ pfam01012"
+ /db_xref="CDD:216243"
+ gene complement(2504345..2504473)
+ /locus_tag="SARI_02577"
+ CDS complement(2504345..2504473)
+ /locus_tag="SARI_02577"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571576.1"
+ /db_xref="GI:161504464"
+ /translation="MNHQSDVTVVRETVIFAVNMKLMEVIITPALHNLENEVKCGQ"
+ gene complement(2504768..2505355)
+ /locus_tag="SARI_02578"
+ CDS complement(2504768..2505355)
+ /locus_tag="SARI_02578"
+ /inference="protein motif:HMMPfam:IPR001584"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:REFSEQ:YP_402259.1"
+ /note="'COG: COG2801 Transposase and inactivated
+ derivatives;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571577.1"
+ /db_xref="GI:161504465"
+ /db_xref="InterPro:IPR001584"
+ /db_xref="InterPro:IPR012337"
+ /translation="MATLRGFRTGRWLAGRLMKEPGLVSCQQPAHRYKRGGHEHIAIP
+ NHPERQFAVTEPNQVWCGNVTYIWTGKRWAYLAVVLDLFARKPVGRAMSFSLDSRLTI
+ KALEMAWETRGKPAGVMFHSVQGSHYTSRQFRQLLWRYRIRQSMSRCGNCRDNSPMER
+ FFRSLKNEWMPVVGYVSFSEAAHAITDYIVGYYAH"
+ misc_feature complement(2504849..2505190)
+ /locus_tag="SARI_02578"
+ /note="Integrase core domain; Region: rve; pfam00665"
+ /db_xref="CDD:216050"
+ misc_feature complement(<2504771..2504881)
+ /locus_tag="SARI_02578"
+ /note="Integrase core domain; Region: rve_3; cl15866"
+ /db_xref="CDD:247111"
+ gene complement(2505599..2505850)
+ /locus_tag="SARI_02579"
+ CDS complement(2505599..2505850)
+ /locus_tag="SARI_02579"
+ /inference="protein motif:HMMPfam:IPR002514"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:REFSEQ:AP_000908.1"
+ /note="'COG: COG2963 Transposase and inactivated
+ derivatives;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571578.1"
+ /db_xref="GI:161504466"
+ /db_xref="InterPro:IPR002514"
+ /db_xref="InterPro:IPR009057"
+ /translation="MKKRNFSAEFKRESAQLVVDQNYTVADAASAMDAGLSTMTRWVK
+ QLRDARQGKTPEASPITPEQIEIRELRKKHNVLKWITKY"
+ misc_feature complement(<2505632..2505850)
+ /locus_tag="SARI_02579"
+ /note="Transposase and inactivated derivatives [DNA
+ replication, recombination, and repair]; Region: COG2963"
+ /db_xref="CDD:225511"
+ misc_feature complement(2505635..2505847)
+ /locus_tag="SARI_02579"
+ /note="Transposase; Region: HTH_Tnp_1; cl17663"
+ /db_xref="CDD:248217"
+ gene complement(2505951..2506400)
+ /locus_tag="SARI_02580"
+ CDS complement(2505951..2506400)
+ /locus_tag="SARI_02580"
+ /inference="protein motif:HMMPfam:IPR010745"
+ /inference="similar to AA sequence:REFSEQ:ZP_01537169.1"
+ /note="'COG: COG3518 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571579.1"
+ /db_xref="GI:161504467"
+ /db_xref="InterPro:IPR010745"
+ /translation="MDRKSPSLYEILTGNFTGDLPLEAVNEEDPVILSVLDNIQSILN
+ ARAGTQSHLQDYGLPDMTKILQGMPGTAHELIDTLAGVLLKYEPRLQSLNVTLLEQQV
+ PGELRYAIDAELRGIGLVRYGTEFMSEGKVMIRHLKQQQHLENHKFI"
+ misc_feature complement(2506005..2506388)
+ /locus_tag="SARI_02580"
+ /note="type VI secretion system lysozyme-like protein;
+ Region: VI_zyme; TIGR03357"
+ /db_xref="CDD:234181"
+ gene complement(2506483..2506794)
+ /locus_tag="SARI_02581"
+ CDS complement(2506483..2506794)
+ /locus_tag="SARI_02581"
+ /inference="protein motif:BlastProDom:IPR000290"
+ /inference="protein motif:FPrintScan:IPR000290"
+ /inference="protein motif:Gene3D:IPR000290"
+ /inference="protein motif:HMMPfam:IPR000290"
+ /inference="similar to AA sequence:INSD:AAN78630.1"
+ /note="'COG: NOG17103 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571580.1"
+ /db_xref="GI:161504468"
+ /db_xref="InterPro:IPR000290"
+ /translation="MELGEIMSSIVLKNKIEEYTEQEFLAILKEFRKSTRQAKDLKGS
+ KLDEYLDKLMDNFIQVTAHPKGSDLIVYPEKDEDGEPHRVIEIVKEWRKSQGLPLFKD
+ S"
+ misc_feature complement(2506489..2506761)
+ /locus_tag="SARI_02581"
+ /note="Colicin immunity protein / pyocin immunity protein;
+ Region: Colicin_Pyocin; pfam01320"
+ /db_xref="CDD:201726"
+ gene complement(2506835..2507029)
+ /locus_tag="SARI_02582"
+ CDS complement(2506835..2507029)
+ /locus_tag="SARI_02582"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571581.1"
+ /db_xref="GI:161504469"
+ /translation="MAFPEFFSGQRGPKVTVVFTYQREYAQFKRFGQPAIAGLAAFTA
+ DKSFSTRNPVTIDKPLRLTF"
+ gene complement(2507108..2507254)
+ /locus_tag="SARI_02584"
+ CDS complement(2507108..2507254)
+ /locus_tag="SARI_02584"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571582.1"
+ /db_xref="GI:161504471"
+ /translation="MHQAAGGIIDKYKQAAFWRTTFKPVMMGAVDLDQFTQTITTMSG
+ LINP"
+ gene 2507249..2508079
+ /locus_tag="SARI_02583"
+ CDS 2507249..2508079
+ /locus_tag="SARI_02583"
+ /inference="protein motif:HMMPfam:IPR001584"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:REFSEQ:YP_444089.1"
+ /note="'COG: NOG06535 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571583.1"
+ /db_xref="GI:161504470"
+ /db_xref="InterPro:IPR001584"
+ /db_xref="InterPro:IPR012337"
+ /translation="MHLRFSESETAFDYMLATREYIEQHGKPVSLYSDKHAIFRVSGP
+ ENRNTTVTQFGRVLFDLAIELICANSSEAKGRVERANQTLQDRLIKEMRLEGVTGIEA
+ ANAWLATFIADFNRRFSRPARFPKDLHRPVQESPDELRDIFAWHDVRTVSKSLTFQYD
+ KILYLMDPTEENSRLAGEKIKVLDYPDGTLAFHYGHRSLECQAFDKLACVDQGQIVDN
+ KRLGTVLRLAQVKQDERESEGKRERSKKSPSRKAQVRVQEQLRAINPVLADPRFIQYR
+ "
+ misc_feature <2507264..2507512
+ /locus_tag="SARI_02583"
+ /note="Integrase core domain; Region: rve; pfam00665"
+ /db_xref="CDD:216050"
+ misc_feature <2507471..2507611
+ /locus_tag="SARI_02583"
+ /note="Integrase core domain; Region: rve_3; cl15866"
+ /db_xref="CDD:247111"
+ gene complement(2508186..2508449)
+ /locus_tag="SARI_02585"
+ CDS complement(2508186..2508449)
+ /locus_tag="SARI_02585"
+ /inference="protein motif:BlastProDom:IPR000290"
+ /inference="protein motif:FPrintScan:IPR000290"
+ /inference="protein motif:Gene3D:IPR000290"
+ /inference="protein motif:HMMPfam:IPR000290"
+ /inference="similar to AA sequence:INSD:AAV78820.1"
+ /note="'COG: NOG17103 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571584.1"
+ /db_xref="GI:161504472"
+ /db_xref="InterPro:IPR000290"
+ /translation="MRFEDYTGNEFKNFLQDIFKANTAPDDDKLDELLEHFEKITSHP
+ DGPDLIYHTIDEEDCNPEGITKVVKAWRKSQGLPLFKNSEADS"
+ misc_feature complement(2508207..2508446)
+ /locus_tag="SARI_02585"
+ /note="Colicin immunity protein / pyocin immunity protein;
+ Region: Colicin_Pyocin; pfam01320"
+ /db_xref="CDD:201726"
+ gene complement(2508556..2508819)
+ /locus_tag="SARI_02586"
+ CDS complement(2508556..2508819)
+ /locus_tag="SARI_02586"
+ /inference="protein motif:BlastProDom:IPR000290"
+ /inference="protein motif:FPrintScan:IPR000290"
+ /inference="protein motif:Gene3D:IPR000290"
+ /inference="protein motif:HMMPfam:IPR000290"
+ /inference="similar to AA sequence:REFSEQ:YP_650050.1"
+ /note="'COG: NOG17103 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571585.1"
+ /db_xref="GI:161504473"
+ /db_xref="InterPro:IPR000290"
+ /translation="MTASYKQLNDYTENEFIQFVTDIVEVNSNSEEEHHALVSKFEEL
+ VQHPRGNGLIYYPEDGEDDSPEGIVQAIKTWRKSKGLPLFKDS"
+ misc_feature complement(2508562..2508804)
+ /locus_tag="SARI_02586"
+ /note="Colicin immunity protein / pyocin immunity protein;
+ Region: Colicin_Pyocin; pfam01320"
+ /db_xref="CDD:201726"
+ gene complement(2508905..2509060)
+ /locus_tag="SARI_02587"
+ CDS complement(2508905..2509060)
+ /locus_tag="SARI_02587"
+ /inference="similar to AA sequence:REFSEQ:ZP_00832955.1"
+ /note="'COG: COG3518 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571586.1"
+ /db_xref="GI:161504474"
+ /translation="MDNIQRILNARAGTISHLPDFGLPDMTKILQGMPGTAHELIDTL
+ AGVLMRE"
+ misc_feature complement(<2508941..>2509057)
+ /locus_tag="SARI_02587"
+ /note="Gene 25-like lysozyme; Region: GPW_gp25; cl01403"
+ /db_xref="CDD:242481"
+ gene complement(2509270..2509638)
+ /locus_tag="SARI_02588"
+ CDS complement(2509270..2509638)
+ /locus_tag="SARI_02588"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571587.1"
+ /db_xref="GI:161504475"
+ /translation="MMKRVTSALFIVVLMVVWIILPSTTIPYSYSKVFEINSPDNKYK
+ VIVYHGGIISPMSLYKYLKDEDYFFIIYNASGEVVFKPSPYYGTSNMGAYDGIEFQYG
+ DSHSLLYPGPEGYDSYEFTK"
+ gene complement(2509725..2510504)
+ /locus_tag="SARI_02589"
+ CDS complement(2509725..2510504)
+ /locus_tag="SARI_02589"
+ /inference="similar to AA sequence:REFSEQ:YP_969362.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571588.1"
+ /db_xref="GI:161504476"
+ /translation="MAVSSTTTTKEQEQQEKKVSVDFFHIDMIPDAMDKMKWPVAAKL
+ MRHWFDTKPSFSYTAQSKKSAQDADPTTLPESQINCDIIKMSWAIQYEQVKNGINELS
+ RIWKSEKGIKRLKFQLGKKGSFNEEGILLGYSENIKELDADAQVNILVIGSKFDTVNE
+ WYGAMGNSTLKVCIRGRTSKSGSENIFTVDKLGFYLKDTYDFVDEGKTPEPLGIWSKN
+ RILDKADSALYMSTYLSGVWGVLARDFTGFVPVFNEDFRKW"
+ gene complement(2510504..2511394)
+ /locus_tag="SARI_02590"
+ CDS complement(2510504..2511394)
+ /locus_tag="SARI_02590"
+ /inference="similar to AA sequence:INSD:ABP58869.1"
+ /note="'COG: COG3501 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571589.1"
+ /db_xref="GI:161504477"
+ /translation="MSGELRAGKGLFVAADAQAKAQGEALDRDAALKEIDRLNQQMQQ
+ LEMAAEKAQALKGDVDSQIQMFEQRLKPLSEAVLFSAPEGMAMTSGEDMQLAAARNVA
+ INAGEDFSAGVMGNATLLAGEKLGLFARTGQLSLKSGEGPIDVQAQNASMRLFAEKKL
+ TLSSASDISFVGKKRITLIGGGSYLRLEAGKVEYGTTASYMRKVKRTMAAGSSSLEQG
+ PAELPAPLPDLSCGPNTACFRVLDSLTGSEDMEFAYQVQTSTGTVVGRTDSALTHVVN
+ SDTEENVNLDYVFQIRAGTR"
+ misc_feature complement(2511248..>2511388)
+ /locus_tag="SARI_02590"
+ /note="Putative type VI secretion system Rhs element Vgr;
+ Region: T6SS_Vgr; pfam13296"
+ /db_xref="CDD:205476"
+ misc_feature complement(2510807..2511169)
+ /locus_tag="SARI_02590"
+ /note="Uncharacterized protein conserved in bacteria
+ (DUF2345); Region: DUF2345; pfam10106"
+ /db_xref="CDD:220574"
+ gene complement(2511324..2511521)
+ /locus_tag="SARI_02591"
+ CDS complement(2511324..2511521)
+ /locus_tag="SARI_02591"
+ /inference="similar to AA sequence:REFSEQ:ZP_00823864.1"
+ /note="'COG: COG3501 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571590.1"
+ /db_xref="GI:161504478"
+ /translation="MEDKRGEEHIKLATEYGKTQLNSGHLVDAQGQRRGTGTELRTDE
+ WGTPCWKGTLCRCGCAGESAG"
+ misc_feature complement(<2511384..2511521)
+ /locus_tag="SARI_02591"
+ /note="Putative type VI secretion system Rhs element Vgr;
+ Region: T6SS_Vgr; pfam13296"
+ /db_xref="CDD:205476"
+ gene complement(2511552..2512001)
+ /locus_tag="SARI_02592"
+ CDS complement(2511552..2512001)
+ /locus_tag="SARI_02592"
+ /inference="protein motif:HMMPfam:IPR010745"
+ /inference="similar to AA sequence:REFSEQ:ZP_01537169.1"
+ /note="'COG: COG3518 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571591.1"
+ /db_xref="GI:161504479"
+ /db_xref="InterPro:IPR010745"
+ /translation="MRFKSPSLYEILTGNFTGDLPLEVVNEEDPVILSVLDNIQSILN
+ ARAGTQSHLPDYGLPDMTKILQGMPGTAHELIDILAGVLLKYEPRLQSLNVTLLEQQV
+ PGELRYAIDAELRGIGLVRYGTEFMPEGKVMIRHLKQQQHLENHQFI"
+ misc_feature complement(2511606..2511989)
+ /locus_tag="SARI_02592"
+ /note="type VI secretion system lysozyme-like protein;
+ Region: VI_zyme; TIGR03357"
+ /db_xref="CDD:234181"
+ gene complement(2512033..2512410)
+ /locus_tag="SARI_02593"
+ CDS complement(2512033..2512410)
+ /locus_tag="SARI_02593"
+ /note="'Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571592.1"
+ /db_xref="GI:161504480"
+ /translation="MQENKNIITKLMIAFLWCITVLVVHHFGYEWYMAYFTPRNRGVG
+ LGFVMFYMKYVIIPIIFLSAFIKPKRSSVIFGLVTIFMLYSWYETNPLRVILMLISCS
+ AGYVLVFLLKSVQEKSRINRSKA"
+ gene complement(2512777..2513073)
+ /locus_tag="SARI_02594"
+ CDS complement(2512777..2513073)
+ /locus_tag="SARI_02594"
+ /note="'Psort location: cytoskeletal, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571593.1"
+ /db_xref="GI:161504481"
+ /translation="MNDGDDQPLGYWGWDNVVKPGIISELFESAKITEDGKDYFRVTN
+ GSFVQYREKCHKEGKNVTGDFFVYSTVKRIKVDITIHLNDIDIEEYVTRTNKRA"
+ gene complement(2513108..2513761)
+ /locus_tag="SARI_02595"
+ CDS complement(2513108..2513761)
+ /locus_tag="SARI_02595"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571594.1"
+ /db_xref="GI:161504482"
+ /translation="MANVKVKSKLTDKNESKEIIPVKIFKITDIPDVMDKKGWKIAAG
+ FMRKWFNDPYYEMSKQEKLNKVDMHSINKQHIVDDLPFDWLYTASTRVSPIINNVVKN
+ ISEVREYNETLGKLKGVANQLSNGLIAMIGRLEHLGLVDRKSKAMKSAFLDYSEMPAI
+ ELDRTSQFNYFPIGDTLWEKATDELDDVYGALGSFIVKIAFLNLNITQDKTGFYRNK"
+ gene complement(2513766..2514233)
+ /locus_tag="SARI_02596"
+ CDS complement(2513766..2514233)
+ /locus_tag="SARI_02596"
+ /inference="similar to AA sequence:INSD:ABP58869.1"
+ /note="'COG: COG3501 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571595.1"
+ /db_xref="GI:161504483"
+ /translation="MRLPYREPSGLFDGAAESVWDVRTWHNIATGTVTTRDYNYRTAS
+ TPMDAAVSVRNDAVTTGEYYRYAAPYREAGDDSSPEPETESGAFYARLHHERELNDRT
+ QEPISNIRYELTSPTGSVLKGVSCEKGLTSFISHSKEADIELTILKQDSLYIG"
+ misc_feature complement(2513925..>2514227)
+ /locus_tag="SARI_02596"
+ /note="Phage late control gene D protein (GPD); Region:
+ Phage_GPD; pfam05954"
+ /db_xref="CDD:218824"
+ gene complement(2514257..2514736)
+ /locus_tag="SARI_02597"
+ CDS complement(2514257..2514736)
+ /locus_tag="SARI_02597"
+ /note="'Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571596.1"
+ /db_xref="GI:161504484"
+ /translation="MKMKFKYIFLTVFVSILIITIYFFLKTEKISGIYQNVLYEERWG
+ SECKSTIVLVDNPPVMKSNLVKLWEREKERILSQWMPLNKKCDYILFVNNKPEPPHDS
+ EEIKYWMGDYQLCLKGEIDNCISKDERLFYIGLDKQIYGDRLAGELGNKTIYLSFVD"
+ gene complement(2514733..2516697)
+ /locus_tag="SARI_02598"
+ CDS complement(2514733..2516697)
+ /locus_tag="SARI_02598"
+ /inference="similar to AA sequence:REFSEQ:ZP_01497112.1"
+ /note="'KEGG: cvi:CV0024 2.7e-67 probable
+ hydroxyethylTHIazole kinase K00878;
+ COG: NOG11775 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571597.1"
+ /db_xref="GI:161504485"
+ /translation="MNGSFSDWVIQCMPVDVARSYPVNPVGAWHGGIHILHTDHSSSQ
+ ANPIRAIAEGTIVYARSPSEKKDKKPLAYNGATDDGCVLIRHQILIGDEPVEFVFYSL
+ TMHMKQVRSDILSSIGKSIKREQIIGTSGVVDGKNAFHFQICCEQKMLNALCGRIHGG
+ VNISSPGRLKPIYGDEYYYFPAGTPVYDNIPKGFVRTPMTFTAEDLYIINSGVDTKTF
+ RKKNDGPYDYLGSVTIAVNYISEAAGIDPLKKSKEYSHWVKVATPAGSGWVDVCADNI
+ MKYSDAELPDWAGWSLIDDDTSSDSQCNSEVIKKLQEAKPNDDAKVHLLTQAICKFPF
+ EWDFSTFDARFSWVKNKTDQLPEPLTDDDYNEFREHIKSLCFFDKLPAEVQKELSGQI
+ WHFEPRIFIMQIQKAERRLIFKTIKKINDFTADDMRHGDMTKELILAQGKMNKIDIWG
+ RELKINFFNFDNTVDEHFGNMASMAKWTAWKGEYPPLIQIMIERFKNNEGGVLKHNLL
+ NKAFSEHVTTVECVNKIKEFIRLLLADNGYKSFSINDLNVLNEKIRNNVKLPKFDNYD
+ WFNGLGIAIHDTYSTQIYLDYIDVSDSKFKAEISFQIQDHFGLDVADVNGKGFENLPW
+ FCSWFILQRYTEYGYMPFINEANFTMVIEG"
+ misc_feature complement(2516269..2516610)
+ /locus_tag="SARI_02598"
+ /note="Peptidase family M23; Region: Peptidase_M23;
+ pfam01551"
+ /db_xref="CDD:216566"
+ misc_feature complement(2514736..2515470)
+ /locus_tag="SARI_02598"
+ /note="Protein of unknown function (DUF3289); Region:
+ DUF3289; cl11840"
+ /db_xref="CDD:159636"
+ gene complement(2516748..2519045)
+ /locus_tag="SARI_02599"
+ CDS complement(2516748..2519045)
+ /locus_tag="SARI_02599"
+ /inference="protein motif:HMMPfam:IPR006533"
+ /inference="protein motif:HMMTigr:IPR006533"
+ /inference="similar to AA sequence:INSD:ABP58869.1"
+ /note="'COG: COG3501 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571598.1"
+ /db_xref="GI:161504486"
+ /db_xref="InterPro:IPR006533"
+ /translation="MDNWLALFDGQTRYFLDINDSTVKPDVLRFRGREALSEPFKWDI
+ EFTTPQANISPEEVLMKYASFRMRSGKNVHGVVTRLEWLSTTRDQSLYRLTLSSRLAL
+ LEHTRQCAVFQSQSVPEVVEQVLRKHGLEGPDFEFRLERTYPPRELITQWRETDLQFI
+ QRILSEVGIYWRTVMDDVRGLDTYILADSQLNYRFDVRLPYREPSGLFDGAAESVWDV
+ RTWHTIATGTVMTRDYNYRTASTPMDAAVSVRNDAVTTGEHYRYAVPYREAGDDSSPE
+ PETESGAFYARIHHERELNKSSRIHLFSNAAHLTPGQVLEPQGDVITALQEGVFLTLV
+ TFRGARDSRLHVSVWGQPYTERYCFRPVEIPRPVIPGTLPARIESREKNDIYAHLDEQ
+ GRYRVKLDFDREGTESGYGYLWLRMAKPYAGDTLGWHTPLTDGTEVAIAYSNGDIDLP
+ YIAYALHDSEHPDHVTRDNPTRNVLRTPANNKLRMEDKRGEEHVKLATEYGKTQLNSG
+ HLVNSKGETRGRGAELRTDEWGTLRAGKGLFVSADAQAKAQGEVLDMSAALEEIDRLN
+ QQLQQLEIAAEQAQALKADVDSQIRMFEQRLKPLSEALLMYAPEGMALTSGEHLQMTA
+ TKNVAMNAGGNFSAGVMGNLTALAGEKLGLFARTGQLSLKVSEGPVEVQAQNASMRLF
+ AEKKLTLSSASDISFAGKKRITLVGGGSYLRLEAGKVEYGTMATYMRKVKRTMAAGAN
+ SIDVDIPSIAGEVSILSFTKKILFS"
+ misc_feature complement(2517543..2518970)
+ /locus_tag="SARI_02599"
+ /note="Rhs element Vgr protein; Region: vgr_GE; TIGR01646"
+ /db_xref="CDD:233505"
+ misc_feature complement(2518023..2518949)
+ /locus_tag="SARI_02599"
+ /note="Phage late control gene D protein (GPD); Region:
+ Phage_GPD; pfam05954"
+ /db_xref="CDD:218824"
+ misc_feature complement(2517645..2517893)
+ /locus_tag="SARI_02599"
+ /note="Phage-related baseplate assembly protein; Region:
+ Phage_base_V; pfam04717"
+ /db_xref="CDD:218225"
+ misc_feature complement(2517354..2517635)
+ /locus_tag="SARI_02599"
+ /note="Putative type VI secretion system Rhs element Vgr;
+ Region: T6SS_Vgr; pfam13296"
+ /db_xref="CDD:205476"
+ misc_feature complement(2516877..2517239)
+ /locus_tag="SARI_02599"
+ /note="Uncharacterized protein conserved in bacteria
+ (DUF2345); Region: DUF2345; pfam10106"
+ /db_xref="CDD:220574"
+ gene complement(2519050..2519373)
+ /locus_tag="SARI_02600"
+ CDS complement(2519050..2519373)
+ /locus_tag="SARI_02600"
+ /inference="similar to AA sequence:REFSEQ:ZP_01537168.1"
+ /note="'COG: COG3521 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571599.1"
+ /db_xref="GI:161504487"
+ /translation="MVRVYQLRDSKAIDAADYQTLLRKADTVLNDDVLASKELLVMPN
+ GSVTLNMPMDEDAQFVAVVGLFNRPDQKDNRWRLVLTRDDLDPDKPRIIELGDGWLSL
+ VPVKE"
+ misc_feature complement(2519074..>2519373)
+ /locus_tag="SARI_02600"
+ /note="Type VI secretion lipoprotein; Region: T6SS-SciN;
+ pfam12790"
+ /db_xref="CDD:221773"
+ gene complement(2519528..2519797)
+ /locus_tag="SARI_02601"
+ CDS complement(2519528..2519797)
+ /locus_tag="SARI_02601"
+ /inference="protein motif:HMMPfam:IPR010745"
+ /inference="similar to AA sequence:REFSEQ:ZP_01537169.1"
+ /note="'COG: COG3518 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571600.1"
+ /db_xref="GI:161504488"
+ /db_xref="InterPro:IPR010745"
+ /translation="MTKILQGMPGTAHELIDTLAGVLLKYEPRLQSLNVTLLEQQVPG
+ ELRYAIDAELRGIGLVRYGTEFMPEGKVLIRHLKQQQYLENHQYI"
+ misc_feature complement(2519549..>2519797)
+ /locus_tag="SARI_02601"
+ /note="Gene 25-like lysozyme; Region: GPW_gp25; cl01403"
+ /db_xref="CDD:242481"
+ gene complement(2519858..2520184)
+ /locus_tag="SARI_02602"
+ CDS complement(2519858..2520184)
+ /locus_tag="SARI_02602"
+ /inference="protein motif:BlastProDom:IPR000290"
+ /inference="protein motif:FPrintScan:IPR000290"
+ /inference="protein motif:Gene3D:IPR000290"
+ /inference="protein motif:HMMPfam:IPR000290"
+ /inference="similar to AA sequence:INSD:ABI99597.1"
+ /note="'COG: NOG17103 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571601.1"
+ /db_xref="GI:161504489"
+ /db_xref="InterPro:IPR000290"
+ /translation="MMRFTIGGNIVTEFKKSINDYTEEEFIEFLHEFRKATRKNNSLK
+ GKELDAYLDNLMDHFIKITEHPKQGDLIAYPESPEAREPKNIIRIVKEWRKSKGLPLF
+ KDSEKK"
+ misc_feature complement(2519873..2520148)
+ /locus_tag="SARI_02602"
+ /note="Colicin immunity protein / pyocin immunity protein;
+ Region: Colicin_Pyocin; pfam01320"
+ /db_xref="CDD:201726"
+ gene complement(2520159..2523749)
+ /locus_tag="SARI_02603"
+ CDS complement(2520159..2523749)
+ /locus_tag="SARI_02603"
+ /inference="protein motif:HMMPfam:IPR002711"
+ /inference="protein motif:HMMPfam:IPR006533"
+ /inference="protein motif:HMMPfam:IPR010715"
+ /inference="protein motif:HMMTigr:IPR006533"
+ /inference="similar to AA sequence:INSD:ABP58869.1"
+ /note="'KEGG: eci:UTI89_C0121 1.5e-151 usp; uropathogenic
+ specific protein K01150;
+ COG: COG3501 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571602.1"
+ /db_xref="GI:161504490"
+ /db_xref="InterPro:IPR002711"
+ /db_xref="InterPro:IPR006533"
+ /db_xref="InterPro:IPR010715"
+ /translation="MDNWLALFDGQTRYFLDINDSSVKPDVLRFYGREALSEPFRWDI
+ EFTTLQANIPPEQVLMKYASFRMRSGKSVHGMVTRLEWLSTSKDQSHYRLTLSSRLAL
+ LGYTRQCAVYQNQSVPEVVEQVLRKHGLEGPDFEFRLEHTYPPREIITQWQETDLQFI
+ QRILSEVGIYWRTMMDDVRDLDTYIFADSQLNYQFDVRLPYSEPSGLFDGAAESVWDV
+ RTWHNIATGTVVTRDYNYRTATTPMDAAVSVRSDAVTTGEHYRYAAPYREAGDDASPE
+ PETESGAFYARLHHERELNRSARIHLFSNAAHLTPGQVLEPQGDVITALQEGVFLTLV
+ TFRGARDSRLHVSVWGQPYTERYCFRPVEIPRPVIPGTLPARIESREKNDTYAHLDEQ
+ GRYRVKLDFDREGTESGYGYLWLRMAKPYAGDTLGWHTPLTDGTEVAIAYSNGDIDLP
+ YIAYALHDSEHPDHVNRDNHTRNVLRTPANNKLRMEDRRGEEHIKLATEYGKTQLNSG
+ HLVNSKGETRGRGAELRTDEWGTLRAGKGLFVSADAQAKAQGEVLDMSAALEEIDRLN
+ QQLQQMEIAAEQAQALKADVDSQIRMFEQRLKPLSEALLMSAPEGMALTSGEHMQMTA
+ TKNVAINAGGDASIGAMGNMTALAGDKLGLFARTGQLSMKASEGPVEMQAQNAAMRLF
+ AEKKLTMSSASDISFAGKKRITLVGGGSYLRLEAGKVEYGTTASYLRKVKRTMAASAS
+ AKPVQAVSLPPPATMREFNPETLAPWVTPVYAKSCLKEKGCTDAGTAEEPVDNFGQMT
+ IFAQPVEDDCCGYGHQHEHADDEVVQHAQSAKKRKPDAGGENAPAQATAAPLALGAAT
+ GLMTQVWGEWSLTGALGAARGIPYVGAMMSALYVPSAGEGSDRVPGRDEFWYEEELRQ
+ KSLTGAKATTRVRFFWRQDEQGNMRVYGVHTGEGTPYEGVRTAEMKWVEKNSRYEFKP
+ AHGADVPLITWTPERPEGGDLPAHTGSDIKPIDQATILVTPIPDGKDEYTTPPFPMPE
+ ERDLNDYILVFPAGSGIKPVYVYLKDDSRNQPGTATGNGVKLSGDKPWLDLSVTNKGN
+ GAPIPSHIADKLRGRSYGSFDDLREDLWEEISNDPKLMAQFGEDNQERISNGLAPWVP
+ SDGYYHGPNEVVKKFQIHHDQAIEDGGGVYDLDNLRIVTPRLHDEIHYRR"
+ misc_feature complement(2522247..2523674)
+ /locus_tag="SARI_02603"
+ /note="Rhs element Vgr protein; Region: vgr_GE; TIGR01646"
+ /db_xref="CDD:233505"
+ misc_feature complement(2522727..2523653)
+ /locus_tag="SARI_02603"
+ /note="Phage late control gene D protein (GPD); Region:
+ Phage_GPD; pfam05954"
+ /db_xref="CDD:218824"
+ misc_feature complement(2522349..2522591)
+ /locus_tag="SARI_02603"
+ /note="Phage-related baseplate assembly protein; Region:
+ Phage_base_V; pfam04717"
+ /db_xref="CDD:218225"
+ misc_feature complement(2522058..2522339)
+ /locus_tag="SARI_02603"
+ /note="Putative type VI secretion system Rhs element Vgr;
+ Region: T6SS_Vgr; pfam13296"
+ /db_xref="CDD:205476"
+ misc_feature complement(2521581..2521943)
+ /locus_tag="SARI_02603"
+ /note="Uncharacterized protein conserved in bacteria
+ (DUF2345); Region: DUF2345; pfam10106"
+ /db_xref="CDD:220574"
+ misc_feature complement(2520591..2521016)
+ /locus_tag="SARI_02603"
+ /note="S-type Pyocin; Region: Pyocin_S; pfam06958"
+ /db_xref="CDD:219241"
+ misc_feature complement(2520171..>2520299)
+ /locus_tag="SARI_02603"
+ /note="HNH nucleases; HNH endonuclease signature which is
+ found in viral, prokaryotic, and eukaryotic proteins. The
+ alignment includes members of the large group of homing
+ endonucleases, yeast intron 1 protein, MutS, as well as
+ bacterial colicins, pyocins, and...; Region: HNHc;
+ cd00085"
+ /db_xref="CDD:238038"
+ misc_feature complement(order(2520171..2520173,2520183..2520185,
+ 2520192..2520197,2520207..2520212,2520246..2520248,
+ 2520252..2520260,2520264..2520266))
+ /locus_tag="SARI_02603"
+ /note="active site"
+ /db_xref="CDD:238038"
+ gene complement(2523754..2524278)
+ /locus_tag="SARI_02604"
+ CDS complement(2523754..2524278)
+ /locus_tag="SARI_02604"
+ /inference="similar to AA sequence:REFSEQ:NP_931383.1"
+ /note="'COG: COG3521 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571603.1"
+ /db_xref="GI:161504491"
+ /translation="MATVTRRWALTLIACSLLAGCGLTQTVTDGTVSITKSIFYKKIK
+ TLHLDFTPRTAINADGAQTPLATMMRVYQLRDRKAVDAADYQTLLRNADTVLNDDVLA
+ SKSLLVMPKGSVTLNMPMDEDAQFVAVVGLFNRPDQKDNRWRLVLTRDDLDPDKPRTI
+ ELGDGWLSLVPVKE"
+ misc_feature complement(2523778..2524182)
+ /locus_tag="SARI_02604"
+ /note="Type VI secretion lipoprotein; Region: T6SS-SciN;
+ pfam12790"
+ /db_xref="CDD:221773"
+ gene complement(2524314..2525396)
+ /locus_tag="SARI_02605"
+ CDS complement(2524314..2525396)
+ /locus_tag="SARI_02605"
+ /inference="protein motif:HMMPfam:IPR010732"
+ /inference="similar to AA sequence:INSD:AAT90769.1"
+ /note="'COG: COG3520 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571604.1"
+ /db_xref="GI:161504492"
+ /db_xref="InterPro:IPR010732"
+ /translation="MARELQPARTRLTLTLNKDIWRANFYRFCQLLEQENPDAPKLGT
+ TSHPGDDPVRFRPWPGMGFPVSTLKAVETDEDHPTLPPTVRTTFLGMYGVDSPLPTSW
+ LDDIAQRREGHEAVTSFLDIFSHRITTQYYRIWRKYAYPATFEAGGRDATSQCLLGLV
+ GLGIPGTAEQVATPVSRFLALLGTMRLPTRNAEGIRALVSLLAPNTRAIITEPDPVKV
+ HIDNRSGLGAGNWIRLSQRATLGKTAKEACSRVLVTLETEDPGEAEGWLPGGLLHTDL
+ LVLLRVYLGYRSDARLRLTVPVRLLPEPRLGKGRRIQLGRTGLLGLKAGKLSNNRESL
+ TVSLGCYEGLQCSALPPAEDGHYRFN"
+ misc_feature complement(2524434..2525345)
+ /locus_tag="SARI_02605"
+ /note="Protein of unknown function (DUF1305); Region:
+ DUF1305; pfam06996"
+ /db_xref="CDD:219259"
+ gene complement(2525360..2527129)
+ /locus_tag="SARI_02606"
+ CDS complement(2525360..2527129)
+ /locus_tag="SARI_02606"
+ /inference="protein motif:HMMPfam:IPR010272"
+ /inference="similar to AA sequence:REFSEQ:ZP_00712579.1"
+ /note="'COG: COG3519 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571605.1"
+ /db_xref="GI:161504493"
+ /db_xref="InterPro:IPR010272"
+ /translation="MDDLTLRYYEAEMRYLREAGKEFARAHPDRAAMLNLDKPGARDP
+ YVERLFEGFAFLMGRLREKLDDDLPELTEGLVSLLWPHYMRTIPSLAIVEFSPDWHSL
+ RQAEMLAEGFSVLSRPVGPQKTACQYRTTRDVPLQPLHLADARLHTETDGRSAIRLRF
+ ECPEKVDWSKAGIDKVAIFLNAESPVSSALHLAMTRRVHAMFARHAGTHTERHQFDGW
+ CKPMGFDDNDGLWKKADTAFSGYQLLLEYFSFRPKFMFVELRGLDAIGLTAASTWFEI
+ DIVLSEAWSSDLPFETENFRLHCAPVINLFTLEADPLTLDPLENEYLLRPLRLQDGHT
+ EIYSVDNIHGAVKNGKHPYVPFTSFRHRGGMMRHDAPERYFHTRVKRGPSGLYDTWLI
+ LGGRSFELEQLSEKPESLSMRITGTNGQLPRKALESTLLDRVVKAGKVPVRVLNVTAP
+ TMPLYPPANDRFHWRVMSHLGSNFLSMMDNPEVLRGTLALYDWTDDEMNRRRLEAIVA
+ VKHTLIRRFEKGFMLRGVDIEVTLNTDNFAGEGDVNLFGEMLHRFFALYADIHLFNQL
+ TLVLQPTGKRLRWRENYSQHVPG"
+ misc_feature complement(2525363..2527129)
+ /locus_tag="SARI_02606"
+ /note="Type VI protein secretion system component VasA
+ [Intracellular trafficking, secretion, and vesicular
+ transport]; Region: COG3519"
+ /db_xref="CDD:226050"
+ misc_feature complement(2525372..2527114)
+ /locus_tag="SARI_02606"
+ /note="Bacterial protein of unknown function (DUF879);
+ Region: DUF879; pfam05947"
+ /db_xref="CDD:218821"
+ gene complement(2527163..2528782)
+ /locus_tag="SARI_02607"
+ CDS complement(2527163..2528782)
+ /locus_tag="SARI_02607"
+ /inference="protein motif:HMMPfam:IPR010657"
+ /inference="similar to AA sequence:INSD:ABG18824.1"
+ /note="'COG: COG3515 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571606.1"
+ /db_xref="GI:161504494"
+ /db_xref="InterPro:IPR010657"
+ /translation="MGKSMSSPEDLLTACATSQEERQRLISRANDALSLWDNWLHPFT
+ PGSETGDDPAYDDNFQLMREEINKLSGTDSTLLCELAQKCLCECAKDIRVVTWYVQAR
+ LSRDGEKGLSEGLLLLAAMLTRYGQACHPRRPTARKAALEWLNSAKVIDALLLWPEVD
+ SNDAGLTAGAISLLESTVADWPEAEKPSFAGICTALENRLARSGGMEALVPQNSSTQE
+ HGREAAHSDSPQLSAVKSGRDLLDQAKLLSRWLSEQPQGWLASHRLIKTVRWDTVDQI
+ PPLDSSGRTRLVPPKVEYRAQLKRLYLQKNWTELVEQASQMFCEGVNHFWLDLQWYLW
+ QGLSHAGHPWDAWTNSVLLDLRLLLQRLPGLEGLAWNDGTPFADEVTTAWIAEKVNEG
+ GLLYGDEPATVVNSQSDDVLLLESEAMEKGDAEGPEAALAWLQSRPGMDTPRHRWLIR
+ LLMARVAEQYGRNDMALHLLGELTTSAPQLTLEDWEPALLFEVQARRLKLLRLKAGRS
+ ESDKARLMPEMDTLLAGLIAIDPARAMVLCG"
+ misc_feature complement(2528381..2528566)
+ /locus_tag="SARI_02607"
+ /note="ImpA-related N-terminal; Region: ImpA-rel_N;
+ pfam06812"
+ /db_xref="CDD:203522"
+ misc_feature complement(2527301..2528182)
+ /locus_tag="SARI_02607"
+ /note="type VI secretion-associated protein, VC_A0119
+ family; Region: VI_chp_7; TIGR03362"
+ /db_xref="CDD:234184"
+ STS 2527626..2528999
+ /standard_name="ha2614"
+ /db_xref="UniSTS:515576"
+ gene complement(2528818..2529420)
+ /locus_tag="SARI_02608"
+ CDS complement(2528818..2529420)
+ /locus_tag="SARI_02608"
+ /inference="similar to AA sequence:REFSEQ:ZP_00960989.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571607.1"
+ /db_xref="GI:161504495"
+ /translation="MINEISNGDLTIVGFFSKGENGTSGSCFVKDGNVAIYSKGSLQA
+ LIYGDKITDGSNSPLGAVSKTNLNNTFRLREFFPGMTAVADLFYDGNVARVQPIAPIE
+ PFCNGIAPVPNIYGKDIKSARKLLKNYGWKPENTEADQSDSIAKELNSEGITEVDSCS
+ GTGFGFCNFDYQREGGISLNVITMGDDFTVTDYGAHCPEQ"
+ misc_feature complement(<2528983..2529093)
+ /locus_tag="SARI_02608"
+ /note="PASTA domain of bacterial serine/threonine kinase
+ pknB-like proteins. PknB is a member of a group of related
+ transmembrane sensor kinases present in many gram positive
+ bacteria, which has been shown to regulate cell shape in
+ Mycobacterium tubercolosis; Region: PASTA_pknB; cd06577"
+ /db_xref="CDD:119328"
+ gene 2529536..2529709
+ /locus_tag="SARI_02609"
+ CDS 2529536..2529709
+ /locus_tag="SARI_02609"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571608.1"
+ /db_xref="GI:161504496"
+ /translation="MATICKPSTVDDTLGIFTEALDEKVIVKNNNLQVHIKQCVNRLI
+ YFKIIDATWFLKA"
+ gene complement(2529750..2530934)
+ /locus_tag="SARI_02610"
+ CDS complement(2529750..2530934)
+ /locus_tag="SARI_02610"
+ /inference="protein motif:Gene3D:IPR011990"
+ /inference="protein motif:HMMPfam:IPR001440"
+ /inference="protein motif:HMMPfam:IPR013105"
+ /inference="similar to AA sequence:REFSEQ:YP_851836.1"
+ /note="'KEGG: eci:UTI89_C0725 3.3e-94 hypothetical protein
+ K00754;
+ COG: NOG18138 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571609.1"
+ /db_xref="GI:161504497"
+ /db_xref="InterPro:IPR001440"
+ /db_xref="InterPro:IPR011990"
+ /db_xref="InterPro:IPR013105"
+ /translation="MKGVIKLSLLALSISFSFVGYAESKSVEVLSAVVKDQKIPGAQV
+ VIQRNGEQSISSLSDDSGNAQIGNNAADTNDSLIIIKKSGYSTLVAKCPCSGMSYALS
+ PTMKGLDSMRVVLGWGRSPADLDSHMVYPGNHIFFNHKLGDNGNLDVDDTDSFGPETI
+ TLTRRENGKPYVYAVHDYSDKSDPDTRNLSNSEAKVFVYVGESLVRTYYVPKDQSGNL
+ WTVFKVNENGAIEDVNNIKGISVGAGDIDNVLTPLLNSNTTLPHQNWGAEQIDISNAL
+ NLKGEESYRRKQYEEAISFFTESVNNYSENGKAYGNLGLVYQKVGRTAEAIWANRKAI
+ ALASGKNASTIRAGANYNIGKIYEGEGQYNEALNYYKTAKNEKQNPVYDNAIMRVSSK
+ IN"
+ misc_feature complement(2529924..2530124)
+ /locus_tag="SARI_02610"
+ /note="TPR repeat; Region: TPR_11; pfam13414"
+ /db_xref="CDD:222112"
+ misc_feature complement(2529810..2530115)
+ /locus_tag="SARI_02610"
+ /note="Tetratricopeptide repeat domain; typically contains
+ 34 amino acids
+ [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
+ X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
+ a variety of organisms including bacteria, cyanobacteria,
+ yeast, fungi; Region: TPR; cd00189"
+ /db_xref="CDD:238112"
+ misc_feature complement(order(2529855..2529860,2529867..2529872,
+ 2529879..2529884,2529978..2529983,2529990..2529995,
+ 2529999..2530004,2530089..2530094,2530101..2530106,
+ 2530110..2530115))
+ /locus_tag="SARI_02610"
+ /note="binding surface"
+ /db_xref="CDD:238112"
+ misc_feature complement(order(2529816..2529818,2529825..2529827,
+ 2529837..2529839,2529873..2529875,2529936..2529938,
+ 2529945..2529947,2529957..2529959,2529993..2529995,
+ 2530038..2530040,2530047..2530049,2530059..2530061,
+ 2530095..2530097))
+ /locus_tag="SARI_02610"
+ /note="TPR motif; other site"
+ /db_xref="CDD:238112"
+ misc_feature complement(2529816..2530022)
+ /locus_tag="SARI_02610"
+ /note="Tetratricopeptide repeat; Region: TPR_12;
+ pfam13424"
+ /db_xref="CDD:205602"
+ gene complement(2530990..2532003)
+ /locus_tag="SARI_02611"
+ CDS complement(2530990..2532003)
+ /locus_tag="SARI_02611"
+ /inference="similar to AA sequence:REFSEQ:YP_973451.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571610.1"
+ /db_xref="GI:161504498"
+ /translation="MNRGIHPALAFAKQVEGWSPGVFSQVDKWRETDSLAPWRFMTFR
+ QCKRRLADWLKRNPAPEEGFLCPQIMKRFPPHIVYMTLAAWRTGKTLLHCDESLFRML
+ GETRQTDALSGEMLRRLPFWGFWLDFPADMVFAEGKGALMGAFFTLAYHDNQTDALLA
+ LTLAQDPLSREHIPMGMEYLALTDPVSTAISQQEEGIRGFWHAVLPVLFWLCSENSEW
+ GRQGKPVRPAPRRVGKHQRLIPPDKPVQIFAGARAGSALRQAPRAPEASTSGDSHSTP
+ HRRLRPHVSKAHWQSYWKGKPTQGEEKSMLLKWKPPQIVNGKDDDSLEAVIRFMKDID
+ TSS"
+ gene complement(2532006..2535377)
+ /locus_tag="SARI_02612"
+ CDS complement(2532006..2535377)
+ /locus_tag="SARI_02612"
+ /inference="protein motif:HMMPfam:IPR009612"
+ /inference="protein motif:HMMPfam:IPR010623"
+ /note="'COG: COG3523 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571611.1"
+ /db_xref="GI:161504499"
+ /db_xref="InterPro:IPR009612"
+ /db_xref="InterPro:IPR010623"
+ /translation="MAKVKVKTLIGSVVTVAFFLTVIVAFLFYAFPENVASATGFGPY
+ DGQRILTFCTILVAALFLFGWLIEKAFDFAGRSGLYFHWGQKKAQMVVPATGTIASED
+ DEEEPVFSEDAVSEHLRFRYGRRWQRKVRLLLVMGNPDDVQKAAPGLCHDLWQEGDGN
+ VLIYGGDAQSLPDEIFLSKLKRLRSGQPVDGIIQVMSTSALPTDSERDAFLRFRQKAD
+ HQLGWQAPVWLWLTDKAKGAQQDADTAATGVIFGPEGTIEEADKALTTLSQRLQKAGM
+ AQILNNPAHNGLLQLSSRLQHELKARLTVLLSGLMQGSAAFRLRGVMFSPELAATGTV
+ PNTRLDTPVWKAVIDDCNAVSAKKLGYDWLKVLRLILLALIVLWGAGTQLSLIVNRTQ
+ IYQAQETARQAADTAKPLAERLHNQLVLQQAIARLQHREATGAPWYTRFGLNQDSDTL
+ AALWPLYAKNNAQLMRDATADYLRQQLNAFVQLPPASDARTQGTQHTYDVLKSYLMLA
+ RPDKADASWLAKNVLVAWPKRQNVPDGTWQEMAPKLLGFYAQNLPEHPEWKIKSDAEL
+ ISTVRQILLKQIGQRNAESGLYQDMLKRVASNWPDLTLADMTGDTDASTVFSTDEVVP
+ GMFTRQAWEEQVQDAIDEVVKTRRDEIDWVLTDKTHQPGSDISPEALKARLTERYFTD
+ FGNAWLNMVNSIQWQEASSLSEAIAQLNLIGDIRQSPLVALMNTLNYQGKTGQKGGLL
+ ADSIVDSAKKLIGQKKNARQFIEQTRGPEGPLDGVFGPLMGLMEGKEGTGANGNLSFQ
+ SWLARVTQVRLKLQQVTSAPDPQAMSQMLAQTVFQGKAIDLTDTRDYGSLFAASLGQE
+ WNGFGQSLFVQPLDLAWRQVLAPAAGSLNARWQSTIVEQWNKAFAGRYPFKATGSDAS
+ LPLLAQFLRSDSGRITTFLKTNLGGILHQEGNRWVVDPSASQGMVVSPDFLLAINQLA
+ ELSDIVFSQGDAGVHFELMARPSRDVARVQLTLDEQNLDYFNQMESWQSFTWPGNTYY
+ PGVSLSWRSVNSGMQLYANNQGNWGFIRLLDKALITPLDASRTQLVWITADGNPLKFV
+ MRSELGDGPLALLKLQGFTLPGSIFNVAAGTEGVE"
+ misc_feature complement(2532039..2535215)
+ /locus_tag="SARI_02612"
+ /note="Type VI protein secretion system component VasK
+ [Intracellular trafficking, secretion, and vesicular
+ transport]; Region: IcmF; COG3523"
+ /db_xref="CDD:226054"
+ misc_feature complement(2533182..2534120)
+ /locus_tag="SARI_02612"
+ /note="Intracellular multiplication and human
+ macrophage-killing; Region: IcmF-related; pfam06761"
+ /db_xref="CDD:219164"
+ misc_feature complement(2532456..2532827)
+ /locus_tag="SARI_02612"
+ /note="Protein of unknown function (DUF1215); Region:
+ DUF1215; pfam06744"
+ /db_xref="CDD:219157"
+ gene complement(2535370..2536578)
+ /locus_tag="SARI_02614"
+ CDS complement(2535370..2536578)
+ /locus_tag="SARI_02614"
+ /inference="similar to AA sequence:REFSEQ:ZP_01497111.1"
+ /note="'COG: NOG35365 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571612.1"
+ /db_xref="GI:161504501"
+ /translation="MPVLLDAIPEKATKVQRPDTRRWLLFLAFVMLGGIALALWNWTT
+ ERTGFIFWFTALGLPFCTWGLLFSLRRFAYKAEQVGSESRNVEREKLIECETRRGQRC
+ AWILGTCIQHISGNKPGMLGNAVMHPTPTTGISTPRGGTAAVRYAALTAFQTDLENEI
+ ISTASTLVAHVKKITDTLPKDIPCCLMLDCDDDILEQVEKHLKNELAAKTGRVFRLLA
+ GKGLAAFDAWLDNRWEHPGILVAVTFSLPTQPDEDDADAITLVVLSNRKAAGYPDAVC
+ LHRPEKGLEHTLGKTLQRAILWAGKSSEALNAGWHTGPVTSRGSAWNKACEDNGVTFS
+ LSEDNRSIDPALGYAGRAGPWLAIILASAVCKKNGDQVIAAQPAADKDDVWVAVITKE
+ EVRKGTPKNG"
+ gene 2536198..2536308
+ /locus_tag="SARI_02613"
+ CDS 2536198..2536308
+ /locus_tag="SARI_02613"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571613.1"
+ /db_xref="GI:161504500"
+ /translation="MHNRITQHTWFIAGNMLNASTEYPRAALTPARFTFN"
+ gene complement(2536988..2537500)
+ /locus_tag="SARI_02615"
+ CDS complement(2536988..2537500)
+ /locus_tag="SARI_02615"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571614.1"
+ /db_xref="GI:161504502"
+ /translation="MSNGCIVSDWDGEACGYTWTEGKDVLTSSEEVGADIFDFNSMRP
+ SIIKMKDKLSSLDARGASNLLRCDAPSIENIDKYQQLARENKSNKKIALDAILSFLHS
+ RKEESSVIERASLFAAPNNSSQTKNYLIPGDKIKVIQYSSDRKWVNVGYINPKNIPLI
+ TWIKSDTIAQ"
+ gene complement(2537587..2538201)
+ /locus_tag="SARI_02616"
+ CDS complement(2537587..2538201)
+ /locus_tag="SARI_02616"
+ /note="'Psort location: extracellular, including cell
+ wall, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571615.1"
+ /db_xref="GI:161504503"
+ /translation="MKKILFILAFISFHSMANFSGHWVNENDSQSLTLDLVEDSTHLA
+ GKYCFITNHGNRIDCSEGNDRNINGVIKDNVGVVDFKSTFGGIGQATISIERDLLKYT
+ ITNPTPFVNANMSVPKVILFKKTVQVTGKKSSAHEKYDADVIIRTPTGGSLTFSQKKM
+ VNIMRIIHGAKFYFPIKITLLISVGMTVFTLRMALQKSHPQENT"
+ gene complement(2538198..2538485)
+ /locus_tag="SARI_02617"
+ CDS complement(2538198..2538485)
+ /locus_tag="SARI_02617"
+ /inference="similar to AA sequence:REFSEQ:YP_001120106.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571616.1"
+ /db_xref="GI:161504504"
+ /translation="MVYDWTITSGRAIKQIRKMLHEEYNNHLIVNNIMDDDMIHCMNA
+ VEDQEQLLSRIAETRKDYYRSLTITNGEPNTQIRFLDGWINRVNDCLGVDI"
+ misc_feature complement(2538225..>2538362)
+ /locus_tag="SARI_02617"
+ /note="Predicted Peptidoglycan domain; Region:
+ PG_binding_3; pfam09374"
+ /db_xref="CDD:220210"
+ gene complement(2538491..2538694)
+ /locus_tag="SARI_02618"
+ CDS complement(2538491..2538694)
+ /locus_tag="SARI_02618"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571617.1"
+ /db_xref="GI:161504505"
+ /translation="MIAKHASEWYYGKGDQLWKTYLDTLTTDAPLWKTYLETFLDKMT
+ WMKAVSENGVALGAEPWHMHLQR"
+ gene complement(2538740..2539600)
+ /locus_tag="SARI_02619"
+ CDS complement(2538740..2539600)
+ /locus_tag="SARI_02619"
+ /note="'Psort location: extracellular, including cell
+ wall, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571618.1"
+ /db_xref="GI:161504506"
+ /translation="MRYFKTLVLIFVFSTELSHAIDFKLSSSDQVGDVKYFSLRVQND
+ NEIKNIDVGLEGNSNNAEIKQYYSFSCQWGKAYGVRLNMDSSSIDGPLLFDNIYVLDE
+ KLNIVFAKSYIRMSKQWVDPVSLNSAVCNRSGGDLKNDPTTKKDYIANFEAIQQGPFV
+ LKGINDIVIKYIRDDSLNLIREDANGEVVIDTIKNHDNKSPSVRTVFFMKISSEMNVI
+ SLVSWGGDIDEGDYYKIYGYTYDETGHLRRNTTLDKDSNLSGYNTNQSSFKYKNANSI
+ KEYLIKKYGS"
+ gene complement(2539587..2541803)
+ /locus_tag="SARI_02620"
+ CDS complement(2539587..2541803)
+ /locus_tag="SARI_02620"
+ /inference="protein motif:BlastProDom:IPR000726"
+ /inference="similar to AA sequence:REFSEQ:NP_794935.1"
+ /note="'KEGG: cvi:CV0024 3.2e-07 probable
+ hydroxyethylTHIazole kinase K00878;
+ COG: COG3179 Predicted chitinase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571619.1"
+ /db_xref="GI:161504507"
+ /db_xref="InterPro:IPR000726"
+ /translation="MAGVQRYYTSVEDLQAGHVTGKLEKDTVVTLSDTIVTRSSDKRQ
+ FTEVTITSETKNAAGNTLAAGTKVWTVSDQGSLKVAASAPVPSWWTKCSPAYTNQSES
+ VVNCTSRTNWAYYLSSDDVLQYKNAGSLVADFPLSYEPDNTAQQVIRPGKNAGDAERT
+ FSLVTLGRDKDKLKKDDRVWVVSDGDSLTPVAPAASSSEPVFNGVYVPPTPVPVSAGD
+ SLGHLGFYQLPEENGKRSRYQVHIECLSMDDMEKFITNPGRVGEDTPVYLTWQADAPL
+ FEKGEQGMVAGSRKTKISGIVTLAKVPGVDAAGTALSDNKDAAYFQIRQEGGWLPTAS
+ VQKVSQYALGELGFATLDKAPASFDLIDGINQPNNVVKGILEQLYKAAQEETRTTHAL
+ NKYNYKRLLELIDSNQDGYYSEQEYRQAIHNVSYRDHLYRVIAKHASEWYYGKDDQLW
+ KTYLDTLTTDAPLWKTYLEVFLDKMTWMKAASENGVALGAEPWHMHPIAFLNAIKKGK
+ AKITREMLRRIWPDPRNVSDSVLDVVAEEFSNKFDMCNINTRSRLYHFFAQIYQEVGP
+ AFNLNEGFNYRPQVLIDKFAYYRNHSQDAQVDGFIPGRQAANKQNIANRAYGGREGND
+ DITSGDGWRYRGRGMKQLTFKNNYRSFTNYHERVWGERIDFVTNPDFLVETVYAARSA
+ LYFWDQNNLYSRADNGVSRTVSDSITRIVNLYDNHYEDRHNNLIRFLQEGIFDEIF"
+ misc_feature complement(2539641..2540276)
+ /locus_tag="SARI_02620"
+ /note="lysozyme_like domain. This contains several
+ members including Soluble Lytic Transglycosylases (SLT),
+ Goose Egg-White Lysozymes (GEWL), Hen Egg-White Lysozymes
+ (HEWL), chitinases, bacteriophage lambda lysozymes,
+ endolysins, autolysins, and chitosanases; Region:
+ lysozyme_like; cl00222"
+ /db_xref="CDD:241700"
+ gene complement(2541829..2542269)
+ /locus_tag="SARI_02621"
+ CDS complement(2541829..2542269)
+ /locus_tag="SARI_02621"
+ /inference="protein motif:HMMPfam:IPR001584"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:REFSEQ:ZP_00927110.1"
+ /note="'KEGG: nwi:Nwi_1143 0.0079 helix-turn-helix,
+ fis-type K00986;
+ COG: COG2801 Transposase and inactivated derivatives;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571620.1"
+ /db_xref="GI:161504508"
+ /db_xref="InterPro:IPR001584"
+ /db_xref="InterPro:IPR012337"
+ /translation="MDLFARRVIGWSLSENADTALVSSALRMACETRGQPRDVMFHSD
+ QGSQYTGLKYQQLLWRYRIKQSVSRRGNCWDNSPMERFFRSLKTEWVPTEGYAGKDEA
+ RQQISGYIVNYYNSVRPHHYNGGLTPEESENRYHFYCKTVANIT"
+ misc_feature complement(2542000..>2542269)
+ /locus_tag="SARI_02621"
+ /note="Integrase core domain; Region: rve; pfam00665"
+ /db_xref="CDD:216050"
+ misc_feature complement(2541886..2542089)
+ /locus_tag="SARI_02621"
+ /note="Integrase core domain; Region: rve_3; pfam13683"
+ /db_xref="CDD:222316"
+ gene 2542387..2542779
+ /locus_tag="SARI_02622"
+ CDS 2542387..2542779
+ /locus_tag="SARI_02622"
+ /inference="similar to AA sequence:INSD:ABC42284.1"
+ /note="'Psort location: extracellular, including cell
+ wall, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571621.1"
+ /db_xref="GI:161504509"
+ /translation="MLLTGIFVLMFSGLTTAQVQIFHQTPGTVTAHRDAVLGQHFSQS
+ TRACRATALVPCPAYFTAQPDAHRINGIALFSPVPVTATVYFQRGTKADNRVTVAQPG
+ DYREPFSESDIKSAVEPTFIASLACRYE"
+ gene complement(2543015..2543278)
+ /locus_tag="SARI_02623"
+ CDS complement(2543015..2543278)
+ /locus_tag="SARI_02623"
+ /inference="protein motif:HMMPfam:IPR008727"
+ /inference="similar to AA sequence:INSD:AAX39451.1"
+ /note="'KEGG: dde:Dde_3688 0.0035 acetyltransferase,
+ CysE/LacA/LpxA/NodL family K00633;
+ COG: COG4104 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571622.1"
+ /db_xref="GI:161504510"
+ /db_xref="InterPro:IPR008727"
+ /translation="MLQIIRKGDKTTHGGSVMTGSATMIFGGVGVARKGDMVSCPIPG
+ HGPTTIIEGNPDYLDNGIPVAFHGHKCGCGCTLISSFVQAKVA"
+ misc_feature complement(2543039..2543266)
+ /locus_tag="SARI_02623"
+ /note="PAAR motif; Region: PAAR_motif; pfam05488"
+ /db_xref="CDD:218606"
+ gene complement(2543411..2544289)
+ /locus_tag="SARI_02624"
+ CDS complement(2543411..2544289)
+ /locus_tag="SARI_02624"
+ /note="'COG: NOG27576 non supervised orthologous group;
+ Psort location: golgi, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571623.1"
+ /db_xref="GI:161504511"
+ /translation="MMHLTELNTRSYMHVRMKTLLVFFSFICCICSFNVYANDLWVFY
+ KVSSTDLFSRHDSKTIQNLNELYGKAKINADDNTLTINNDLLESSTVCSVRYRKKKET
+ PLSYFYSKKTLAMYENVFKEDNISLAKNIYILRSYDPDKTCPPPYDEMIESDDYLLLV
+ VQDYLVFFKNITDNLGQLKDLSDKSVFSTFCESTLEGSTFDGKEKYICSFTNYNLSNA
+ YLKFKKISGCDGVLKEMLPGRNESYYMGDAKVVYQWIGSNEVKITVIQNMDEGVYSFK
+ KTESGTQVAVIIKSGY"
+ gene complement(2544273..2547371)
+ /locus_tag="SARI_02625"
+ CDS complement(2544273..2547371)
+ /locus_tag="SARI_02625"
+ /inference="protein motif:HMMPfam:IPR002196"
+ /inference="protein motif:HMMPfam:IPR002886"
+ /inference="protein motif:superfamily:IPR011054"
+ /inference="similar to AA sequence:INSD:EAU93984.1"
+ /note="'KEGG: cch:Cag_0702 4.9e-16 probable phage-related
+ lysozyme K01185;
+ COG: COG3179 Predicted chitinase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571624.1"
+ /db_xref="GI:161504512"
+ /db_xref="InterPro:IPR002196"
+ /db_xref="InterPro:IPR002886"
+ /db_xref="InterPro:IPR011054"
+ /translation="MTAKMPKISFPVPSNKNGHPFSSAEELLSALGGESSGLYLVGSQ
+ GMWHGGIHITDATMPWCALSTDSAAESEYRPELYKGEQFIRCMADGEIVAWRVCESYE
+ SAGIDWRGEKLLLSNSFVLVKHYIQPGDSVESGLTFFTLYMNMAPYLAYKQQGNQLDR
+ KVAGVQRYYTSVEDLQAGHVTGKLEKDTVVTLSDTIVTRSSDKRQFTEVTITSETKNA
+ AGNTLAAGTKVWTVSDQGSLKVAASAPVPSWWTKCSPAYTNQSESVVNCTSRTNWAYY
+ LSSDDVLQYKNAGSLVADFPLSYEPDNTAQQVIRPGKNAGDAERTFSLVTLGRDKDKL
+ KKDDRVWVVSDGDSLTPVAPAASSSEPVFNGVYVPPTPVPVSAGDSLGHLGFYQLPEE
+ NGKRSRYQVHIECLSMDDMEKFITNPGRVGEDTPVYLTWQADAPLFEKGEQGMVAGSR
+ KTKISGIVTLAKVPGVDAAGTALSDNKDAAYFQIRQEGGWLPTASVQKVSQYALGELG
+ FATLDKAPASFDLIDGINQPNNVVKGILEQLYKAAQEETRTTHALNKYNYKRLLELID
+ RNQDGYYSEQEYLQAIHNVSYRDHLYRVIAKHASEWYYGKDAPLWKTYLDTLTTDAPL
+ WKMYLETFLDKMTWMKAVSEKGVPLGPAPWHMHPIVFMDSLSQKKTHQIIFPLKVKPK
+ NDKRGIWKDYYWAAALSDSNASQSIFGRNRDSGRRKHAARDLYTEPRAEIVAICAGVV
+ KSISTYYYGTWQITIEHKTNDGREFFIRYGEVEHNSIIVNVGDRVLLGSVIARTGLLI
+ NPRTQRHPNIIPGQIVYMLHLEYYTNMSEGVPPNNTGGTVTPYDRRSDLQDPLDILRE
+ GYKNTFEQDDANERIDINQLNISEQGKQFIKEWEGLRTEAYNDSEGYCTIGYGHLIAR
+ DRCESITLPDEFSHGITQERANELFEERLPSYVDGVKSSVSVKLYQYEFDALVCLLFN
+ IGSSGLRLKAPMLRNKLNQEDYEGAAQEFLDITNGGESGLVARRISENNLFLNNIYDA
+ SH"
+ misc_feature complement(<2544987..2545223)
+ /locus_tag="SARI_02625"
+ /note="Peptidase family M23; Region: Peptidase_M23;
+ pfam01551"
+ /db_xref="CDD:216566"
+ misc_feature complement(2544315..2544740)
+ /locus_tag="SARI_02625"
+ /note="lysozyme_like domain. This contains several
+ members including Soluble Lytic Transglycosylases (SLT),
+ Goose Egg-White Lysozymes (GEWL), Hen Egg-White Lysozymes
+ (HEWL), chitinases, bacteriophage lambda lysozymes,
+ endolysins, autolysins, and chitosanases; Region:
+ lysozyme_like; cl00222"
+ /db_xref="CDD:241700"
+ misc_feature complement(2544702..2544704)
+ /locus_tag="SARI_02625"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:238249"
+ gene complement(2547387..2549744)
+ /locus_tag="SARI_02626"
+ CDS complement(2547387..2549744)
+ /locus_tag="SARI_02626"
+ /inference="protein motif:HMMPfam:IPR006533"
+ /inference="protein motif:HMMTigr:IPR006533"
+ /inference="similar to AA sequence:REFSEQ:ZP_00725607.1"
+ /note="'COG: COG3501 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571625.1"
+ /db_xref="GI:161504513"
+ /db_xref="InterPro:IPR006533"
+ /translation="MSSFLSNKATSLVHQLLGQSRYRVDVHECSHFLDVLRYSAVESL
+ SQPWRYDVAVTCTSADIACDTLLLKPASFTFQTPVFDGTPALPVRTVFGVVESFRRVS
+ TSNDETHYALTIVPRIALLGYTKGSEIYLNQSVIEVVEQVLRKHGLEGPDFEFRLSRE
+ YPSRELITQWRETDLEFIQRLLAEVGIYWRYEMDSRLEQDVVIFQDSQQQYEFGVTLP
+ LRNQAGMSDSGQESIWDIQTAYNVVSGSVATRDYNYRDALTPQDSAESIFSKEGITTG
+ ETYHYAEPFLTAGDADSPETGAYFARLRHERILNAQYRVSGHSSSPHLAPGQVLETDG
+ TLPDAVKDGIVITTVRTSGSRKSSFTMTFEGIPYSETVCWRPALLNRPVISGSLPARV
+ ESTQKGDTYSWLDPQGRYRVKLDLDRNSPEQGYAYLWLRLAKPYAGDTYGFHSPLIDG
+ TEVAVVFDGGDPDRPYIAYALHDSEHPDHVTSDNHTRNVWRTPANNKLRMEDKRQEEH
+ IKLATEYGKTQLNMGHLVNSQREKRGAGFELRTDEHGAVRAAKGLFLTADAQAKAQGP
+ VLEMAPAINQINQANSQMQALNSAAEAAGALVSDISTQVNLVRDRLKDLQSAVLLASA
+ PQGVAFTSGEHLQLSSARNTMINAGQHLDIGAMKNLSVSVEKALGMFVHKGGAKVVAN
+ QGDIELQAQHNTMALFSEKQLTVTSSEDEIIISTPETLTLNGGGSYLRLSKNGIEHGS
+ EGIMVMKVASYLVPGTGASQQMETPDFKTTDVTVTRKNSAKWTSE"
+ misc_feature complement(2548197..2549648)
+ /locus_tag="SARI_02626"
+ /note="Rhs element Vgr protein; Region: vgr_GE; TIGR01646"
+ /db_xref="CDD:233505"
+ misc_feature complement(2548680..2549621)
+ /locus_tag="SARI_02626"
+ /note="Phage late control gene D protein (GPD); Region:
+ Phage_GPD; pfam05954"
+ /db_xref="CDD:218824"
+ misc_feature complement(2548299..2548526)
+ /locus_tag="SARI_02626"
+ /note="Phage-related baseplate assembly protein; Region:
+ Phage_base_V; pfam04717"
+ /db_xref="CDD:218225"
+ misc_feature complement(2547990..2548289)
+ /locus_tag="SARI_02626"
+ /note="Putative type VI secretion system Rhs element Vgr;
+ Region: T6SS_Vgr; pfam13296"
+ /db_xref="CDD:205476"
+ misc_feature complement(2547480..2547917)
+ /locus_tag="SARI_02626"
+ /note="Uncharacterized protein conserved in bacteria
+ (DUF2345); Region: DUF2345; pfam10106"
+ /db_xref="CDD:220574"
+ gene complement(2549741..2552413)
+ /locus_tag="SARI_02627"
+ CDS complement(2549741..2552413)
+ /locus_tag="SARI_02627"
+ /inference="protein motif:FPrintScan:IPR001270"
+ /inference="protein motif:HMMPfam:IPR003959"
+ /inference="protein motif:HMMPfam:IPR004176"
+ /inference="protein motif:HMMPfam:IPR013093"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR001270"
+ /note="'KEGG: eci:UTI89_C3197 0. ClpB protein K01358;
+ COG: COG0542 ATPases with chaperone activity, ATP-binding
+ subunit;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571626.1"
+ /db_xref="GI:161504514"
+ /db_xref="InterPro:IPR001270"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR003959"
+ /db_xref="InterPro:IPR004176"
+ /db_xref="InterPro:IPR013093"
+ /translation="MEHHSAVLLRRLNPYCARALEGAASLCQARAHAEITPEHWLLKL
+ LEQGEGDLTVLARRYEWDMDAVWQSLLSWLDAQPRSVRTRPELSASLQTLVKQAWLAA
+ TLAGDEQIRSIHLLTAMIETSGLTRCDGLWPLMTLTTSQLERLRPLLEAQSDERHDVT
+ LSEQPGNVSIIGRAAPLQHEAQHQSEGGSVQPAVSQEESVLNRFTVDVTARAREGKID
+ PVFGRDNEIRQMVDILSRRRKNNPILVGEPGVGKTALVEGLALRIAEGNVPESLKPVI
+ VRTLDLGLLQAGAGVKGEFEQRLKNIIDAVQHFPVPVLLFIDEAHTIIGAGNQAGGAD
+ AANLLKPALARGELRTIAATTWSEYKQYFERDAALERRFQMVKVDEPDDDTACLMLRG
+ LKSRYAEHHGVHITGEAVRAAVTLSRRYLTGRQLPDKAVDLLDTAAARVRMSLDTLPE
+ QLTRLQAELTALAMEQQELLEDISLGNAVDASRLPQIEQLSLELNQQKAALQSQYETE
+ KQLTDSLKACREDISRQEELSALQHELSQIQNNSPLLGLDVDVRTVATVIADWTGVPL
+ SSLMKDEQTELLTLEEQLATRVVGQGPALNAIAERMRASKTGLTPENGQQGVFLLVGP
+ SGVGKTETALALADVMYGGEKSLITINLSEYQEPHTVSQLKGSPPGYVGYGQGGILTE
+ AVRKRPYSVVLLDEVEKAHRDVMNLFYQVFDRGFMRDGEGREIDFRNTVILMTSNLGS
+ DPLMQFLEEQPEATESDLHELLRPILRDHFQPALLARFQTVIYRPLEMDAMRTIVGIK
+ LAQVSTRLQRHYGISTHIGESLFDTLTKACLLTDTGARNVDSLLNQQILPVLSQQLLS
+ HMAAKQKPSSLQLTWDDEEGIVLAFDAQVEGEPS"
+ misc_feature complement(2549804..2552380)
+ /locus_tag="SARI_02627"
+ /note="type VI secretion ATPase, ClpV1 family; Region:
+ VI_ClpV1; TIGR03345"
+ /db_xref="CDD:234172"
+ misc_feature complement(2552216..2552347)
+ /locus_tag="SARI_02627"
+ /note="Clp amino terminal domain; Region: Clp_N;
+ pfam02861"
+ /db_xref="CDD:217254"
+ misc_feature complement(2551271..2551753)
+ /locus_tag="SARI_02627"
+ /note="The AAA+ (ATPases Associated with a wide variety of
+ cellular Activities) superfamily represents an ancient
+ group of ATPases belonging to the ASCE (for additional
+ strand, catalytic E) division of the P-loop NTPase fold.
+ The ASCE division also includes ABC; Region: AAA; cd00009"
+ /db_xref="CDD:99707"
+ misc_feature complement(2551655..2551678)
+ /locus_tag="SARI_02627"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(order(2551349..2551351,2551460..2551462,
+ 2551652..2551675))
+ /locus_tag="SARI_02627"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(2551457..2551474)
+ /locus_tag="SARI_02627"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(2551298..2551300)
+ /locus_tag="SARI_02627"
+ /note="arginine finger; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(2550191..2550580)
+ /locus_tag="SARI_02627"
+ /note="The AAA+ (ATPases Associated with a wide variety of
+ cellular Activities) superfamily represents an ancient
+ group of ATPases belonging to the ASCE (for additional
+ strand, catalytic E) division of the P-loop NTPase fold.
+ The ASCE division also includes ABC; Region: AAA; cd00009"
+ /db_xref="CDD:99707"
+ misc_feature complement(2550524..2550547)
+ /locus_tag="SARI_02627"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(order(2550203..2550205,2550329..2550331,
+ 2550521..2550544))
+ /locus_tag="SARI_02627"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(2550326..2550343)
+ /locus_tag="SARI_02627"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(2549831..2550058)
+ /locus_tag="SARI_02627"
+ /note="C-terminal, D2-small domain, of ClpB protein;
+ Region: ClpB_D2-small; pfam10431"
+ /db_xref="CDD:204486"
+ gene complement(2552577..2553068)
+ /locus_tag="SARI_02628"
+ CDS complement(2552577..2553068)
+ /locus_tag="SARI_02628"
+ /inference="protein motif:HMMPfam:IPR008514"
+ /inference="similar to AA sequence:REFSEQ:ZP_00823859.1"
+ /note="'COG: COG3157 Hemolysin-coregulated protein
+ (uncharacterized);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571627.1"
+ /db_xref="GI:161504515"
+ /db_xref="InterPro:IPR008514"
+ /translation="MAIPVYLWLKDDGGADIKGSVDVKDREGSIEVVAQEHTLYIPTD
+ NNTGKLTGTRIHTPFLFTKEIDSSSPYLYKAVTTGQTLKSAEFKWYKINDAGQEVEYF
+ NTKLENVKLVKVAPKMHDIKDASFEKHNHLEQIELRYEKITWTYKDGNIIHSDSWNER
+ TTA"
+ misc_feature complement(2552589..2553065)
+ /locus_tag="SARI_02628"
+ /note="type VI secretion system effector, Hcp1 family;
+ Region: VI_effect_Hcp1; TIGR03344"
+ /db_xref="CDD:213799"
+ gene complement(2553071..2554750)
+ /locus_tag="SARI_02629"
+ CDS complement(2553071..2554750)
+ /locus_tag="SARI_02629"
+ /inference="protein motif:BlastProDom:IPR006665"
+ /inference="protein motif:HMMPfam:IPR006665"
+ /inference="similar to AA sequence:REFSEQ:ZP_01537153.1"
+ /note="'KEGG: bxe:Bxe_A4171 0.0052 putative cytochrome c
+ oxidase K00403;
+ COG: COG2885 Outer membrane protein and related
+ peptidoglycan-associated (lipo)proteins;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571628.1"
+ /db_xref="GI:161504516"
+ /db_xref="InterPro:IPR006665"
+ /translation="MRRSVIIPVVLHSLVAVATLLWLLWYFIPTGNVFNGMTTLLILL
+ LAGWYVFKNCRNEEPTSDVTLPAAELPLLDTRGPVVLVCGDGLDALFQEGPLRKTAQG
+ WWLRAGDVNRLTDVVRSIQTQFPRQVGQLSVMYRCLPDHHQDEAVLRSALKTLRQQCK
+ QIQSLTGFTLPVVLSAEFSGPETPWIIVRGDKPIVCPVNDSPQAFIDWQQAEDNILAL
+ PAVSEAFSFIRNTLADELEKTDRLTPPVCAFSVAMRLGTVLPCTESVWAGWLYTRTCL
+ QFSRKPGQSAPASLFPDAVLPLLAPFASTVQGGQRTRRLILLMWLCALTALGISALNN
+ RDLIRQVSTDLQRWNAIPMDHYRPKAESLAALKQDALLLERWQRQGEPLRYSLGYYPG
+ QRLWLALQQAIDTWTPPPAPEPKPVPKIVRLDSMSLFDSGKSVLKPGSTKMLVNSLLG
+ IKARPGWLIVVSGHTDNTGSVQLNQTLSLQRAEAVRNWMRDTGDVPESCFAVQGYGDS
+ RPIASNDTPDGRAHNRRVEISLVPQADACRLPGAKHASQDVRDVSTQEMEK"
+ misc_feature complement(2553152..>2553493)
+ /locus_tag="SARI_02629"
+ /note="Outer membrane protein and related
+ peptidoglycan-associated (lipo)proteins [Cell envelope
+ biogenesis, outer membrane]; Region: OmpA; COG2885"
+ /db_xref="CDD:225439"
+ misc_feature complement(2553161..2553469)
+ /locus_tag="SARI_02629"
+ /note="Peptidoglycan binding domains similar to the
+ C-terminal domain of outer-membrane protein OmpA; Region:
+ OmpA_C-like; cd07185"
+ /db_xref="CDD:143586"
+ misc_feature complement(order(2553179..2553181,2553191..2553193,
+ 2553320..2553322,2553329..2553334,2553344..2553346,
+ 2553353..2553358,2553455..2553460))
+ /locus_tag="SARI_02629"
+ /note="ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:143586"
+ gene complement(2554750..2555439)
+ /locus_tag="SARI_02630"
+ CDS complement(2554750..2555439)
+ /locus_tag="SARI_02630"
+ /inference="similar to AA sequence:INSD:ABE08642.1"
+ /note="'COG: COG3455 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: vesicles of secretory system, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571629.1"
+ /db_xref="GI:161504517"
+ /translation="MRQDIDIDQLMAETWLTVTMLKKGAVTLDGTALYDKCVKQVETV
+ REALERAGYDDASVEHISYAQCALLDETVMSRKSEKSEEGEEPKVDEGQVAWRKAPLQ
+ ARFFGSLRAGEALWDRIAEVLRQPSPNPAVLTCYHRVIALGFQGLYSLKAVSQSQRDE
+ VVKALSERVSPPDTGLSLVVHRMGKHRWSLMRSVWFWIVLAVILTGVIWWGGHLWLQA
+ LLSAHIPELHG"
+ misc_feature complement(2554792..2555421)
+ /locus_tag="SARI_02630"
+ /note="Uncharacterized protein conserved in bacteria
+ (DUF2077); Region: DUF2077; pfam09850"
+ /db_xref="CDD:220442"
+ gene complement(2555436..2556785)
+ /locus_tag="SARI_02631"
+ CDS complement(2555436..2556785)
+ /locus_tag="SARI_02631"
+ /inference="protein motif:HMMPfam:IPR010263"
+ /inference="similar to AA sequence:INSD:ABP61578.1"
+ /note="'COG: COG3522 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571630.1"
+ /db_xref="GI:161504518"
+ /db_xref="InterPro:IPR010263"
+ /translation="MKIYRPLWNEGALLSPQQFQQQAEWESFRCAGASALASPFPWGV
+ EKIEFNDSLLSSGLIQITQLRLWLEDGSLIDAQRSDLPPAPRELDASQLAGRDAVTVV
+ IALPHMQPGVANVEQEGVSPDRPLRYREEWVTLQDAFGSEEESMAVARFNFTIRFAHE
+ SNDSWKVCPVARLIRDGQNAWRQDPSFIPPVASFGASPVLRERLVLLNRQLRSRRQRL
+ MTMRRESNERLADFAVADVSLFWLLNALNSHARVLTEYERFPSRPPEQVWAELARLAG
+ SMLTFSLDHDLDAIPGYDHEEPANAFPPLFDLITGLLEASLPSRVIALEMSRPDGQTW
+ KANLHDIRLREEADLYLSVRSDIPAWQVAEKFPALCQAGSPDDVREIYGAALKGIPLI
+ PVSRVPAALPVRMENQYFALDMESPAAHEMQEQGVCMFYVPELLGALELELFAVLRS"
+ misc_feature complement(2555445..2556773)
+ /locus_tag="SARI_02631"
+ /note="type VI secretion protein, VC_A0114 family; Region:
+ VI_chp_4; TIGR03353"
+ /db_xref="CDD:132396"
+ misc_feature complement(2555445..2556734)
+ /locus_tag="SARI_02631"
+ /note="Bacterial protein of unknown function (DUF876);
+ Region: DUF876; pfam05936"
+ /db_xref="CDD:218816"
+ gene complement(2556798..2558339)
+ /locus_tag="SARI_02632"
+ CDS complement(2556798..2558339)
+ /locus_tag="SARI_02632"
+ /inference="protein motif:HMMPfam:IPR010269"
+ /inference="similar to AA sequence:REFSEQ:ZP_01537150.1"
+ /note="'KEGG: bpm:BURPS1710b_A0534 1.0e-115 hypothetical
+ protein K00356;
+ COG: COG3517 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571631.1"
+ /db_xref="GI:161504519"
+ /db_xref="InterPro:IPR010269"
+ /translation="MSVNAETQSVQGNTTVLENNPDSVYASLFEKINLNPVSRLGDIT
+ EYQDESVMADASADERVTAAIQVFMQVISKSGQLVEKLDKSLLDSHIAELDYQISRQL
+ DEVMHHPEFQRVESLWRGLKHTVDRTDFRQNVKIEILDVSKDDLRQDFEDAPEIIQSG
+ LYHHTYSMEYDQPGGEPIAAIISSYEFDSSAQDVALLRNISKVSAAAHMPFIGSVGPK
+ FFHKSSMEEVAAIKDIGNYFDRAEYIKWKAFRDSEDSRYIGLTMPRVLGRLPYGPDTV
+ PVRSFNYVEEVKGPDHEKYLWTNASFAFAANMVKSFINNGWCVQIRGPQAGGAVQDLP
+ IHLYDLGTGNQVKIPSEVMIPETREFEFSNLGFIPLSYYKNRDYSCFFSANSAQKPAL
+ YDTADATANSRINARLPYIFLLSRIAHYLKLIQRENIGTTKDRRLLELELNTWVKGLV
+ TEMTDPGDDLQASHPLRDAKVIVEDIEDNPGFFRVKLFAVPHFQVEGIDVNLSLVSQM
+ PKAKA"
+ misc_feature complement(2556813..2558273)
+ /locus_tag="SARI_02632"
+ /note="Predicted component of the type VI protein
+ secretion system [Intracellular trafficking, secretion,
+ and vesicular transport]; Region: COG3517; cl05484"
+ /db_xref="CDD:244108"
+ misc_feature complement(2556813..2558081)
+ /locus_tag="SARI_02632"
+ /note="Protein of unknown function (DUF877); Region:
+ DUF877; pfam05943"
+ /db_xref="CDD:218820"
+ gene complement(2558381..2558878)
+ /locus_tag="SARI_02633"
+ CDS complement(2558381..2558878)
+ /locus_tag="SARI_02633"
+ /inference="protein motif:HMMPfam:IPR008312"
+ /inference="protein motif:HMMPIR:IPR008312"
+ /inference="similar to AA sequence:REFSEQ:ZP_00832938.1"
+ /note="'COG: COG3516 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571632.1"
+ /db_xref="GI:161504520"
+ /db_xref="InterPro:IPR008312"
+ /translation="MADSSFQNEVPKARVNIQLDLHTGSAQKKVELPLKLLAVGNFSN
+ GKETLPLSERSKLNISKNNFNSVLSELNPEVSIDVANTLRGDGSEENIKLSFSEMKDF
+ EPEAIAKQIPQLRAMLAMRNLLRDLKSNLLDNAEFRRSLETILKDPALSEELRQELNA
+ LAPAE"
+ misc_feature complement(2558396..2558863)
+ /locus_tag="SARI_02633"
+ /note="Protein of unknown function (DUF770); Region:
+ DUF770; pfam05591"
+ /db_xref="CDD:218647"
+ gene complement(2559425..2559901)
+ /locus_tag="SARI_02634"
+ CDS complement(2559425..2559901)
+ /locus_tag="SARI_02634"
+ /inference="protein motif:HMMPfam:IPR001584"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:REFSEQ:NP_943514.1"
+ /note="'KEGG: nwi:Nwi_1143 3.8e-09 helix-turn-helix,
+ fis-type K00986;
+ COG: COG2801 Transposase and inactivated derivatives;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571633.1"
+ /db_xref="GI:161504521"
+ /db_xref="InterPro:IPR001584"
+ /db_xref="InterPro:IPR012337"
+ /translation="MDFVSDNLFNGRRFRALTVVDNFSRECLAIHAGKSLKGEDVVRI
+ MEALRVLDKRLPVRIQTDNGSEFISKSLDKWAYEHGVTMDFSRPGKPTDNPFIESFNG
+ SLRDECLNIHWFLSLEDAQEKLDNWRREYNHERTHSSLNDMTPAEFIRSLRKDEDL"
+ misc_feature complement(2559440..>2559901)
+ /locus_tag="SARI_02634"
+ /note="Transposase and inactivated derivatives [DNA
+ replication, recombination, and repair]; Region: Tra5;
+ COG2801"
+ /db_xref="CDD:225361"
+ misc_feature complement(2559578..2559901)
+ /locus_tag="SARI_02634"
+ /note="Integrase core domain; Region: rve; pfam00665"
+ /db_xref="CDD:216050"
+ misc_feature complement(2559467..2559667)
+ /locus_tag="SARI_02634"
+ /note="Integrase core domain; Region: rve_3; pfam13683"
+ /db_xref="CDD:222316"
+ gene complement(2560258..2560524)
+ /locus_tag="SARI_02635"
+ CDS complement(2560258..2560524)
+ /locus_tag="SARI_02635"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR002514"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:REFSEQ:YP_153352.1"
+ /note="'COG: COG2801 Transposase and inactivated
+ derivatives;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571634.1"
+ /db_xref="GI:161504522"
+ /db_xref="InterPro:IPR002514"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /translation="MKKTRYTEEQIAFALKQAETGTRVGEVCRKMGISEATFYNWKKK
+ FAGLGVTELRRLRQLEDENQRLKKLVAELSLDKEMLQEVLKQKF"
+ misc_feature complement(2560402..2560521)
+ /locus_tag="SARI_02635"
+ /note="Helix-turn-helix domain of Hin and related
+ proteins, a family of DNA-binding domains unique to
+ bacteria and represented by the Hin protein of Salmonella.
+ The basic HTH domain is a simple fold comprised of three
+ core helices that form a right-handed...; Region:
+ HTH_Hin_like; cd00569"
+ /db_xref="CDD:119388"
+ misc_feature complement(order(2560402..2560410,2560414..2560419,
+ 2560513..2560521))
+ /locus_tag="SARI_02635"
+ /note="DNA-binding interface [nucleotide binding]; DNA
+ binding site"
+ /db_xref="CDD:119388"
+ misc_feature complement(<2560270..2560491)
+ /locus_tag="SARI_02635"
+ /note="Winged helix-turn helix; Region: HTH_29; pfam13551"
+ /db_xref="CDD:222216"
+ gene 2561061..2561264
+ /locus_tag="SARI_02636"
+ CDS 2561061..2561264
+ /locus_tag="SARI_02636"
+ /note="'Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571635.1"
+ /db_xref="GI:161504523"
+ /translation="MEFMKERDLNIDFLRILACIFVIGIHATYNFNPHGLMDFNNYAG
+ LILHSILIAALQIFLCHCNTNLT"
+ gene 2561261..2562277
+ /locus_tag="SARI_02637"
+ CDS 2561261..2562277
+ /locus_tag="SARI_02637"
+ /inference="protein motif:HMMPfam:IPR002656"
+ /inference="similar to AA sequence:INSD:AAY57551.1"
+ /note="'KEGG: lsl:LSL_1527 3.7e-16 O-acetyl transferase
+ K00680;
+ COG: COG3594 Fucose 4-O-acetylase and related
+ acetyltransferases;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571636.1"
+ /db_xref="GI:161504524"
+ /db_xref="InterPro:IPR002656"
+ /translation="MKLINMNTRTLWIDSLKAIAIFWIYLGHFEDNGKQLYQLAFSFH
+ IPLFFFISGIFHKRCESLSDLISIIKNGFAKIMIPYFAFSIISLAFFSLYNNSSFDQV
+ KEMSLQILPAIRNQIFAGSLWFLPCLYVMIVMYSLILLTIKNKYIIFIICFIVFVIST
+ KLKIGFVPALFLNIDSALLYIIYYALGAYFSKYIRTTTLNTQCVYSKIALYAVTAVSF
+ IVFIYSYFFGAGSIYSYIQNETMRILLSFVVTVLLFIPNIILSKYIIFTPILEIGRST
+ LVLCGTEQLIKTLIYSTFNMFGMPVYLHNPVDTIVYTLICLLISYFTTIKAYNYLYNK
+ KQAL"
+ misc_feature 2561276..>2561680
+ /locus_tag="SARI_02637"
+ /note="Fucose 4-O-acetylase and related acetyltransferases
+ [Carbohydrate transport and metabolism]; Region: NolL;
+ COG3594"
+ /db_xref="CDD:226122"
+ gene complement(2562294..2564444)
+ /locus_tag="SARI_02638"
+ CDS complement(2562294..2564444)
+ /locus_tag="SARI_02638"
+ /inference="protein motif:Gene3D:IPR009093"
+ /inference="similar to AA sequence:INSD:ABA54611.1"
+ /note="'COG: NOG23139 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571637.1"
+ /db_xref="GI:161504525"
+ /db_xref="InterPro:IPR009093"
+ /translation="MPDITPNIVVSQPSKLFTLARSFKANADGKIYIGKIDTDPVNPE
+ NQIPVYLEREDGTHVQVQQPIVINSAGYPVYNGQIAKFVTVQGHSMAVYDAYGSQQFY
+ YPNVLKYDPDRLRQQLASHAAGNGDELVAVKQPIENSKERTVHDWLADIITAKDGANI
+ IADGINNDAVGINALLPVLSDLQRELILVPGVYLINDDITIDIPVTFQPGAIIKPRNG
+ AQVTFNAEIMAGNYQIFDTEDDFYTEPEAKTSIKITGVNIRPEWFGATTISDVNAILN
+ IADSSSAFRKAFRAATGDFKPIDSTSYRSEFICKKIELSNGHYRMDKPTTHGFHKNNT
+ FYKVNGGGYVGKGMGSSILVYTDLHYEGNSFFDFSYGSWEMHELSGFKCTAYNPLEDD
+ PYYARVGAIMLFGSTDSLITNEIWASGAKYIRNDPDGTRRGGVGIQFESLVDHSFCNL
+ LVEHCINGIAFSSCISTGVNIKGFSNTVSDFAFGNFIPDWPPLSEQITSNVISINGLE
+ SKACGATPMFFGTNDNNVVITGLLIDGRAEASLSTVTYQAIGISKSGGVHGTITGIAV
+ NTNYGLIDDIGTGSAGSAGKTLYLNFVISGVYGTIGSEFSVINITNPKSHINATLSLS
+ NSSLPAILSYSSYSTISLSCSGVDGGTQDALIEVKNGNLIINSLDDSGSTYGKLAYVE
+ NAVLIIPPIILSTSRIAIKGSGGIIKTTSIIDFT"
+ misc_feature complement(2564103..2564438)
+ /locus_tag="SARI_02638"
+ /note="Head binding; Region: Head_binding; pfam09008"
+ /db_xref="CDD:149919"
+ gene complement(2564616..2566613)
+ /locus_tag="SARI_02639"
+ CDS complement(2564616..2566613)
+ /locus_tag="SARI_02639"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571638.1"
+ /db_xref="GI:161504526"
+ /translation="MAKAWKDVIASQQYQALASEQKAQAQEQYFNEVVAPQAGENAEQ
+ AKQAFYAAYPLPSAQPVETLQPVAQQQPQQGGFMSDLGEAVKETGRGLVQAGVNVANI
+ PASVADAVTSAAAWAGGKLGIGDGTYQPAPRVTTQGLEQDFGLQQGALTPQTTEGRVF
+ AEALPYLTPAGVERAATQAPTLAGRIAHGATRLLAENAVGSLAANSAKDDAEALATDL
+ GVGVLAGGAINAAGRGLGAAYRGVRGAIAPEAQQAIRFAEREGVPLHTTDLLQPTSRV
+ GKMAQTTAENIPLAGTSGMRATQQEARSQLVQRFADKFGEYDPAVVIESLKAKTSGIR
+ RAAGNRLEQVTNAMAGVNIQPARAIQQIDTEISNLQKLGKVADNETISKLQSYRDELV
+ RNAGPDGPVNLDLKQLSDLRSQFRMDVKGERPVLPNRSDAAIQRVYKAMTDDINSAID
+ QNFGNDTLRKYQQANAVYADEAAKLKNTRLKNVLMKGDLTPEVVNNMLFSKNKSEIKT
+ LYNSVGRVGRAQMRNGIIGKAMEKSGGSPDQFLRQLNILQNQTGIIFKGQDAAYLKGL
+ KNYLQSTQQAAKAAVTTPTGQQTIPFIIGYGTAMNPATTGAAVSYGLLTRAYESEPFR
+ NAMLRMANTPRGSTAFEKAMQQAQKAINSLTQGAKSDALSE"
+ gene complement(2566613..2567953)
+ /locus_tag="SARI_02640"
+ CDS complement(2566613..2567953)
+ /locus_tag="SARI_02640"
+ /inference="similar to AA sequence:REFSEQ:YP_151584.1"
+ /note="'COG: COG1835 Predicted acyltransferases;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571639.1"
+ /db_xref="GI:161504527"
+ /translation="MQVANQNAPGQPSLSSYDFSQRPNVGVQLAQGLGAVGQAIQQNE
+ DAQRLSDFQKAFGQAYAAGDRDALRQLAATNPDQIETIRQGMGFVDADRNQAMGDMSA
+ RLNIAAAQGPEAVMRELATHQNTLQQIGVSPEQAWQTYQQSPEGFTQLTDLIGMHAVG
+ PEKYFDIQDKLTGREIDRGRLAETIRSNKAGEGLQARGQNITMRGQDMSAATARRGQD
+ LATQRANARTISGSEGNRVVQLADGRTVSVGGKLHGAGANAFYEGIDDNGNMVRVPAS
+ AIAAPPTSAASAQNYAMKKDIDALSSASAEDLGFMTGVTGSSGAPALGADIRSRASGG
+ DQRKLYNAAQRVQGKMQNQGIAAARDMGASGINTVAEAKMYFQGMPQVDYSSPEALQQ
+ SMRDIQQYTDNYNQQYSVEVGNGGAQTQSSRPAQQSKPTQKPQQNTDFSSLWGD"
+ gene complement(2567996..2568685)
+ /locus_tag="SARI_02641"
+ CDS complement(2567996..2568685)
+ /locus_tag="SARI_02641"
+ /inference="similar to AA sequence:SwissProt:Q8HAD9"
+ /note="'COG: NOG21185 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571640.1"
+ /db_xref="GI:161504528"
+ /translation="MLYAFKLGRKLRGEEPYYPEKGGKGGSSSSGAKEAAKATQYAAD
+ LQNQQFNRVMEQLAPYAAAGLPALQQIQQLSTLEGQNSALNQYYNSDQYKQLADQARY
+ QSLNAAEATGGLGSTATSNQIASIAPTLGQNWLSGQMQNYGNLLNVGQSAAAGQASAG
+ QNYANNAGNLAQQMAAIRSQGSGQSTLGSAITGGASGALAGAGLAGMLGASTPWGAGI
+ GAGIGLLGSLF"
+ gene complement(2568688..2569143)
+ /locus_tag="SARI_02642"
+ CDS complement(2568688..2569143)
+ /locus_tag="SARI_02642"
+ /inference="similar to AA sequence:REFSEQ:YP_151586.1"
+ /note="'COG: NOG27003 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571641.1"
+ /db_xref="GI:161504529"
+ /translation="MITFTPTRNIDLIETVGNHPDIIAGSNNGDGYDYKPECRYFEVN
+ VHGQFGGIVYYNEIQPMTFDCHAMYLPEIRGFSKEIGLAFWRYILTNTTVQCVTSFAA
+ RKFRHGQMYCAMIGLKRVGTIKKYFKGVDDVTFYSATREELIDFLNHGR"
+ misc_feature complement(2568691..2569143)
+ /locus_tag="SARI_02642"
+ /note="head assembly protein; Region: PHA00771"
+ /db_xref="CDD:164842"
+ gene complement(2569143..2569844)
+ /locus_tag="SARI_02643"
+ CDS complement(2569143..2569844)
+ /locus_tag="SARI_02643"
+ /inference="protein motif:superfamily:IPR009053"
+ /inference="similar to AA sequence:INSD:AAM81393.1"
+ /note="'COG: NOG35461 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571642.1"
+ /db_xref="GI:161504530"
+ /db_xref="InterPro:IPR009053"
+ /translation="MADPSLNNPVVIQATRLDASILPRNVFSKSYLLYVIAQGTDVGA
+ IAGKANEAGQGAYDAQVKNDEQDVELADHEARIKQLRIDVDDHESRITANTKAITALN
+ VRVTTVEGEIASLQTNVSALDGRVTTAENNISALQADYVSKTATTSQSLASPLNVTTS
+ YSVGGKKVVGARQTGWTAATGTANKGAFNADLTFSVSDTYTQSEIQAIANALIAERRR
+ TKALEDALRAHGLID"
+ misc_feature complement(<2569419..>2569652)
+ /locus_tag="SARI_02643"
+ /note="Protein of unknown function (DUF812); Region:
+ DUF812; pfam05667"
+ /db_xref="CDD:218681"
+ gene complement(2569848..2571242)
+ /locus_tag="SARI_02644"
+ CDS complement(2569848..2571242)
+ /locus_tag="SARI_02644"
+ /inference="similar to AA sequence:INSD:BAD15219.1"
+ /note="'COG: NOG20264 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571643.1"
+ /db_xref="GI:161504531"
+ /translation="MKGLGKDFRNADYIDFLPVNLLATPKEVLNSSGYLRSFPGIAKR
+ NDVNGVSRGVEYNTAQNAVYRVLGSKLYKGETVVGDVAGSGRVSMAHGRTSQAVGVNG
+ QLVEYRYDGTVKTVSNWPTDSGFMQYELGSVRDITRLRGRYAWSKDGTDSWFITDLED
+ ESHPDRYSAQYRAESQPDGIIGIGTWRDFIVCFGSSTIEYFSLTGSTAVGASLYVAQP
+ SLMVQKGIAGTYCKTPFADSFAFISHPATGAPSVYIIGSGQASPIATASIEKIIRSYT
+ AEELATGVMEALRFDSHELLIIHLPRHVLAYDASSSQNGPQWCVLKTGLYDDVYRAID
+ FMYEGNQITCGDKSEAVTGQLQFDISSQYGLQQEHLLFTPLFRADNARCFDLEVESST
+ GVAQYADRLFLSATTDGINYGREQMIEQNEPFVYDKRVLWKRVGRIRLLIGFKLRVIT
+ KSPVTLSGCQIRLE"
+ misc_feature complement(2569851..2571242)
+ /locus_tag="SARI_02644"
+ /note="Phage stabilisation protein; Region:
+ Phage_stabilise; pfam11134"
+ /db_xref="CDD:192709"
+ gene complement(2571226..2571726)
+ /locus_tag="SARI_02645"
+ CDS complement(2571226..2571726)
+ /locus_tag="SARI_02645"
+ /inference="similar to AA sequence:INSD:BAD15217.1"
+ /note="'COG: NOG35717 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571644.1"
+ /db_xref="GI:161504532"
+ /translation="MQIKTKGDLVMAALRKLGVASDATLTDVEPQSMQDAVDDLEAMM
+ AEWYQGGKGIITGYVFSDDDNPPSEGDDHGLRSSAVSAVFHNLACRIAPDYALEATAK
+ IIATAKYGKELLYKQTAIARAKRAPYPSRMPTGSGNSFANLNEWHYFPGEQNADSTTS
+ PDEGTG"
+ misc_feature complement(2571229..2571723)
+ /locus_tag="SARI_02645"
+ /note="P22 tail accessory factor; Region: P22_Tail-4;
+ pfam11650"
+ /db_xref="CDD:204701"
+ gene complement(2571710..2571919)
+ /locus_tag="SARI_02646"
+ CDS complement(2571710..2571919)
+ /locus_tag="SARI_02646"
+ /inference="similar to AA sequence:INSD:DAA00988.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571645.1"
+ /db_xref="GI:161504533"
+ /translation="MKIAIYKPGGSIMVWGVMAQMKVIDSSELPEYVKDGWLDHPSKL
+ LPVEADDVKPRKGRKPKAVSDADKD"
+ gene complement(2571958..2573253)
+ /locus_tag="SARI_02647"
+ CDS complement(2571958..2573253)
+ /locus_tag="SARI_02647"
+ /inference="protein motif:HMMPfam:IPR004100"
+ /inference="similar to AA sequence:INSD:AAX21429.1"
+ /note="'COG: NOG20265 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571646.1"
+ /db_xref="GI:161504534"
+ /db_xref="InterPro:IPR004100"
+ /translation="MAGLNEGQIVTLAVDEIIETISAITPMAQKAKKYTPPAASMQRS
+ SNTIWMPVEQESPTQEGWDLTDKATGLLELNVAVNMGEPDNDFFQLRADDLRDETAYR
+ HRIQSAARKLANNVELKVANMAAEMGSLVITSPDAIGTNTADAWNFVADAEEIMFSRE
+ LNRDMGTSYFFNPQDYKKAGYDLTKRDIFGRIPEEAYRDGTIQRQVAGFDDVLRSPKL
+ PVLTKSTATGITVSGAQSFKPVAWQLDNDGNKVNVDNRFATVILSATTGLKRGDKISF
+ TGVKFLGQMAKNVLAQDATFSVVRVVDATHVEITPKPVALDDVSLSPEQRAYANVNTS
+ LADAMAVNILNVKDARTNVFWADDAIRIVSQPIPANHELFAGMKTTSFSIPDVGLNGI
+ FATQGDISTLSGLCRIALWYGVNATRPEAIGVGLPGQTA"
+ misc_feature complement(2571961..2573247)
+ /locus_tag="SARI_02647"
+ /note="coat protein; Region: PHA01511"
+ /db_xref="CDD:107035"
+ misc_feature complement(2571970..2573247)
+ /locus_tag="SARI_02647"
+ /note="P22 coat protein - gene protein 5; Region:
+ P22_CoatProtein; pfam11651"
+ /db_xref="CDD:221157"
+ gene complement(2573253..2574164)
+ /locus_tag="SARI_02648"
+ CDS complement(2573253..2574164)
+ /locus_tag="SARI_02648"
+ /inference="similar to AA sequence:INSD:AAM81388.1"
+ /note="'COG: NOG20266 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571647.1"
+ /db_xref="GI:161504535"
+ /translation="MEPTTEIQATEDLTLSGDHAAASADSLVVDNANDNAGQEEGFEI
+ VLKDDETAPKQDPAKNAEFARRRIERKRQRELEQQMEAVKRGELPESLRVNPDLPPQP
+ DINSYLSEEGLAKYDYDNSRALAAFNAANTEWLMKAQDARSNAVAEQGRKTQEFTQQS
+ AQYVEAARKHYDAAEKLNIPDYQEKEDAFMQIVPPAVGADIMRLFPEKSAALMYHLGA
+ NPEKARQLLAMGGQSALIELTRLSERLTLKPRGKQISSAPLADQPITGDVSAANKDAI
+ RKQMDAAASKGDVETYRKLKAKLKGIR"
+ misc_feature complement(2573256..2574164)
+ /locus_tag="SARI_02648"
+ /note="Bacteriophage, scaffolding protein; Region:
+ Phage-scaffold; pfam09306"
+ /db_xref="CDD:117848"
+ gene complement(2574178..2576355)
+ /locus_tag="SARI_02649"
+ CDS complement(2574178..2576355)
+ /locus_tag="SARI_02649"
+ /note="'COG: NOG10141 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571648.1"
+ /db_xref="GI:161504536"
+ /translation="MADNENRLESILSRFDADWAASDEARREAKNDLFFSRISQWDDW
+ LSQYTTLQYRGQFDVVRPVVRKLVSEMRQNPIDVLYRPKDGASPDAADVLMGMYRTDM
+ RHNTAKIAVNVAVREQIEAGVGAWRLVTDYEDQSPTSNNQVIRREPIHSACSHVIWDS
+ NSKLMDKSDARHCTVIHSMSQNGWEGFAEKYDLDADDIPSFQNPNDWVFPWLTQDTIQ
+ IAEFYEVFEKKETAFIYQDPVTGEPVSYFKRDIKDVIDDLADSGFIKIAERQIKRRRV
+ YKSIITCTAVLKDKQLIAGEHIPIVPVFGEWGFVEDKEVYEGVVRLTKDGQRLRNMIM
+ SFNADIVARTPKKKPFFWPEQIAGFEHMYDGNDDYPYYLLNRTDENSGDLPTQPLAYY
+ ENPEVPQANAYMLEAATSAVKEVATLGVDAGSVNGNQVAFDTVNQLNMRADLETYVFQ
+ DNLATAMRRDGEIYQSIVNDIYDVPRNVTITLEDGSEKDVQLMAEVVDLATGERQVLN
+ DIRGRYECYTDVGPSFQSMKQQNRAEIIELLGKTPQGTPEYQLLLLQYFTLLDGKGVE
+ MMRDYANKQLIQMGVKKPETPEEQQWLVEAQQAKQGQQDPAMVQAQGVLLQGQAELAK
+ AQNQTLSLQIDAAKVEAQNQLNAARIAEIFNNMDLNKQSEFREFLKTVASFQQDRSED
+ ARANAELLLKGDEQTHKQRMDIANILQSQRQNQPSGSVAETPQ"
+ gene complement(2576355..2577854)
+ /locus_tag="SARI_02650"
+ CDS complement(2576355..2577854)
+ /locus_tag="SARI_02650"
+ /inference="protein motif:HMMPfam:IPR004921"
+ /inference="similar to AA sequence:SwissProt:P26745"
+ /note="'COG: COG5565 Bacteriophage terminase large
+ (ATPase) subunit and inactivated derivatives;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571649.1"
+ /db_xref="GI:161504537"
+ /db_xref="InterPro:IPR004921"
+ /translation="MELDAILDNLSDEEQIELLELLEEEESYRNTHLLYEFTPYSKQR
+ EFIDAGHDYPERCFMAGNQLGKSFTGAAEVAFHLTGRYPGTKGYPADGKYGGEWKGKR
+ FYEPVVFWIGGETNETVTKTTQRILCGRIEENDEPGYGSIPKEDIISWKKSPFFPNLV
+ DHLLVKHHTADGVEDGISICYFKPYSQGRARWQGDTIHGVWFDEEPPYSIYGEGLTRT
+ NKYGQFSILTFTPLMGMSDVVTKFLKNPSKSQKVVNMTIYDAEHYTDEQKEQIIASYP
+ EHEREARARGIPTMGSGRIFQIPEETIKCQPFECPDHFYVIDAQDFGWNHPQAHIQLW
+ WDKDADVFYLARVWKKSENTAVQAWGAVKSWANKIPVAWPHDGHQHEKGGGEQLKTQY
+ ADAGFSMLPDHATFPDGGNSVESGISELRDLMLEGRFKVFNTCEPFFEEFRLYHRDEN
+ GKIVKTNDDVLDATRYGYMMRRFARMMRDIRKPKEKKIPSPIRPVRRGR"
+ misc_feature complement(2576442..2577686)
+ /locus_tag="SARI_02650"
+ /note="Terminase-like family; Region: Terminase_6;
+ pfam03237"
+ /db_xref="CDD:217445"
+ misc_feature complement(2577126..2577329)
+ /locus_tag="SARI_02650"
+ /note="Bacteriophage terminase large (ATPase) subunit and
+ inactivated derivatives [General function prediction
+ only]; Region: COG5565"
+ /db_xref="CDD:227852"
+ gene complement(2577832..2578320)
+ /locus_tag="SARI_02651"
+ CDS complement(2577832..2578320)
+ /locus_tag="SARI_02651"
+ /inference="similar to AA sequence:INSD:ABN47322.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571650.1"
+ /db_xref="GI:161504538"
+ /translation="MAAPKGNRFWEARSSHGRNPKFESPEALWAACCEYFEWVEANPL
+ WEMKAFSYQGEVTQEPIAKMRAMTITGLTLFLDVTLETWRQYRVREDLSEVVTRAEQI
+ IYDQKFSGAAADLLNANIIARDLGLKEQSQVEDVTPDKGDRDKRRSRIKELFNRGTGR
+ DS"
+ gene complement(2578344..2578523)
+ /locus_tag="SARI_02652"
+ CDS complement(2578344..2578523)
+ /locus_tag="SARI_02652"
+ /inference="similar to AA sequence:REFSEQ:NP_112074.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571651.1"
+ /db_xref="GI:161504539"
+ /translation="MISVINLGKEKKFPITQELYDRLESVIHDYDGEISLCEAIGTLE
+ LLKQSLIEGAKEQST"
+ misc_feature complement(2578350..2578523)
+ /locus_tag="SARI_02652"
+ /note="hypothetical protein; Region: PHA00781"
+ /db_xref="CDD:133939"
+ gene complement(2578525..2578881)
+ /locus_tag="SARI_02653"
+ CDS complement(2578525..2578881)
+ /locus_tag="SARI_02653"
+ /inference="similar to AA sequence:INSD:ABQ88403.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571652.1"
+ /db_xref="GI:161504540"
+ /translation="MAKKILCGGGLMERHRLLQRPFNEWPRQWLIPTTGANTMAEIIP
+ MTEEQKFQLEIYKLFMNQNAAAEEAFQFIGTDELKLELFKIHFQSGGANSDITTRTIE
+ AVRKSKEALDLFTTGS"
+ misc_feature complement(2578528..2578767)
+ /locus_tag="SARI_02653"
+ /note="Protein of unknown function (DUF2560); Region:
+ DUF2560; pfam10834"
+ /db_xref="CDD:151283"
+ gene complement(2578981..2579466)
+ /locus_tag="SARI_02654"
+ CDS complement(2578981..2579466)
+ /locus_tag="SARI_02654"
+ /inference="similar to AA sequence:REFSEQ:YP_215339.1"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571653.1"
+ /db_xref="GI:161504541"
+ /translation="MNNFVEITSRIGRMYQDFLISGKGSGDIIEEIDKLSAELRRNGC
+ VNSIFFETLLKQGFMFDMINYNKVAPSASQKSYVYVLHAEDSGLTKIGFSRRVNKRIS
+ EISRMSGGKLNLIAKIPADRELETKLHQKYYNYRSHGEWFSLNRCHLKELKEMPGNEL
+ K"
+ misc_feature complement(2579005..2579238)
+ /locus_tag="SARI_02654"
+ /note="T5orf172 domain; Region: T5orf172; pfam10544"
+ /db_xref="CDD:220802"
+ gene complement(2579674..2580111)
+ /locus_tag="SARI_02655"
+ CDS complement(2579674..2580111)
+ /locus_tag="SARI_02655"
+ /inference="protein motif:HMMPfam:IPR004929"
+ /inference="similar to AA sequence:INSD:DAA01041.1"
+ /note="'KEGG: ssn:SSO_2782 2.0e-39 ybcT;
+ endopeptidase-like protein K01423;
+ COG: NOG28105 non supervised orthologous group;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571654.1"
+ /db_xref="GI:161504542"
+ /db_xref="InterPro:IPR004929"
+ /translation="MSRIKAIIASVIICIIVCLSWAVNHYRNNAITYKDQRDKATSII
+ ADMQKRQRDVAELDARYTKELADANATIESLRADVSAGRKRLQVSATCPKSTTGASGM
+ GDGESPRLTADAELNYYRLRSGIDKITAQVNYLQEYIRAQCLK"
+ misc_feature complement(2579680..2580027)
+ /locus_tag="SARI_02655"
+ /note="Bacteriophage lysis protein; Region: Phage_lysis;
+ pfam03245"
+ /db_xref="CDD:190576"
+ gene complement(2580108..2580548)
+ /locus_tag="SARI_02656"
+ CDS complement(2580108..2580548)
+ /locus_tag="SARI_02656"
+ /inference="protein motif:HMMPfam:IPR002196"
+ /inference="similar to AA sequence:INSD:CAA47617.1"
+ /note="'KEGG: sec:SC2614 2.4e-27 lycV; Gifsy-2 prophage
+ lysozyme K01185;
+ COG: COG3772 Phage-related lysozyme (muraminidase);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571655.1"
+ /db_xref="GI:161504543"
+ /db_xref="InterPro:IPR002196"
+ /translation="MMQISSNGITRLKREEGERLKAYPDSRGIPTIGVGHTGKVDGNP
+ VVSGMIITAEKSSELLKEDLLWVEDAISSLVRVPLNQNQYDALCSLIFNIGKSAFAGS
+ TVLRQLNLKNYQAAADAFLLWKKAGKDPDILLPRRRRERALFLS"
+ misc_feature complement(2580126..2580539)
+ /locus_tag="SARI_02656"
+ /note="Endolysins and autolysins are found in viruses and
+ bacteria, respectively. The ds DNA phages of eubacteria
+ use endolysins or muralytic enzymes in conjunction with
+ hollin, a small membrane protein, to degrade the
+ peptidoglycan found in bacterial cell...; Region:
+ endolysin_autolysin; cd00737"
+ /db_xref="CDD:238378"
+ misc_feature complement(order(2580456..2580458,2580501..2580503))
+ /locus_tag="SARI_02656"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:238378"
+ gene complement(2580532..2580855)
+ /locus_tag="SARI_02657"
+ CDS complement(2580532..2580855)
+ /locus_tag="SARI_02657"
+ /inference="protein motif:HMMPfam:IPR006481"
+ /inference="protein motif:HMMTigr:IPR006481"
+ /inference="similar to AA sequence:INSD:DAA01038.1"
+ /note="'KEGG: sto:ST2057 0.0051
+ UDP-N-acetylglucosamine--dolichyl-phosphate
+ N-acetylglucosaminephosphstransferase K01001;
+ COG: NOG33147 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571656.1"
+ /db_xref="GI:161504544"
+ /db_xref="InterPro:IPR006481"
+ /translation="MKKMPEKHDLLTAMMAAKEQGIGAILAFAMAYLRGRYNGGAFKK
+ TLIDATMCAIIAWFIRDLLVFAGLSSNLAYIASVFIGYIGTDSIGSLIKRFAAKKAGV
+ DDANQ"
+ misc_feature complement(2580544..2580849)
+ /locus_tag="SARI_02657"
+ /note="phage holin, lambda family; Region: holin_lambda;
+ TIGR01594"
+ /db_xref="CDD:233485"
+ gene complement(2581298..2582062)
+ /locus_tag="SARI_02658"
+ CDS complement(2581298..2582062)
+ /locus_tag="SARI_02658"
+ /inference="protein motif:BlastProDom:IPR003222"
+ /inference="protein motif:HMMPfam:IPR003222"
+ /inference="similar to AA sequence:INSD:AAW70544.1"
+ /note="'COG: NOG09845 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571657.1"
+ /db_xref="GI:161504545"
+ /db_xref="InterPro:IPR003222"
+ /translation="MNLENVVKFHFAKSSQINDIPRATASETLTGTDVMAAMGMTQSR
+ ASLGYSAFLGKMEISSNDREKAIELLTAYALKNCDNVPALRKLENDIKPKVMQVLATF
+ AFSDYSRSAASTRTCDCCGGKKFIDAEVMTMKSIGQPYLSERKETVKVLCNKCKGKGV
+ LTNACQCNGKGVVIDKEKTILQGGVPAYKTCRRCNGRGYARLLPDSVRKYICATVIDI
+ PETTWRRSYKDFFESLVGECIKQEEYANQMLSKVTQ"
+ misc_feature complement(2581730..2582023)
+ /locus_tag="SARI_02658"
+ /note="Antitermination protein; Region: Antiterm;
+ pfam03589"
+ /db_xref="CDD:146301"
+ misc_feature complement(2581310..2581591)
+ /locus_tag="SARI_02658"
+ /note="Antitermination protein; Region: Antiterm;
+ pfam03589"
+ /db_xref="CDD:146301"
+ gene complement(2582059..2582241)
+ /locus_tag="SARI_02659"
+ CDS complement(2582059..2582241)
+ /locus_tag="SARI_02659"
+ /inference="similar to AA sequence:REFSEQ:YP_215332.1"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571658.1"
+ /db_xref="GI:161504546"
+ /translation="MCGITSINQAKQQRERDEAELRSVREMTEQHQKAMDYLHERERE
+ LVNRIGLNNPAGGDAA"
+ gene complement(2582229..2582699)
+ /locus_tag="SARI_02660"
+ CDS complement(2582229..2582699)
+ /locus_tag="SARI_02660"
+ /note="'COG: NOG14016 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571659.1"
+ /db_xref="GI:161504547"
+ /translation="MALKRDKFDDVFSQLVRERTDWQCDYCGRTFHHERQKLHCSHFK
+ SRRHKATRYHPYNAFAHCIGCHRKLEEDPYEFTAHAEIVYGEMTIERVARLACIPVHL
+ KPWQMDELYQHMNSELKRLQELRAHGVTGRIDFTLPDWYQDGIQLHMGESQCAA"
+ gene complement(2583266..2583688)
+ /locus_tag="SARI_02661"
+ CDS complement(2583266..2583688)
+ /locus_tag="SARI_02661"
+ /inference="similar to AA sequence:INSD:ABP59705.1"
+ /note="DLP12 prophage"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571660.1"
+ /db_xref="GI:161504548"
+ /translation="MQEFILHETNKSQFWLVLKQILSTGKRWRIKISEYREKRSLPQN
+ SLMWKWNTEIADQLSATGVDRFTDEEVHEWLKDMYCPATPVTVFGMTRYVKSTRQLDI
+ GEMHKYLTDIDQWAHQKGLRLTIPDNCEYLDLKRRQEE"
+ misc_feature complement(2583269..2583688)
+ /locus_tag="SARI_02661"
+ /note="hypothetical protein; Provisional; Region:
+ PRK09741"
+ /db_xref="CDD:182057"
+ gene complement(2583691..2583891)
+ /locus_tag="SARI_02662"
+ CDS complement(2583691..2583891)
+ /locus_tag="SARI_02662"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571661.1"
+ /db_xref="GI:161504549"
+ /translation="MSEKTVTLTRRQFRHLCDALINTVNMGQQFMAISTDGSEMSDKA
+ FYQAQLLRQAIERQLKVATDGR"
+ gene complement(2583894..2584157)
+ /locus_tag="SARI_02663"
+ CDS complement(2583894..2584157)
+ /locus_tag="SARI_02663"
+ /inference="similar to AA sequence:REFSEQ:ZP_00719003.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571662.1"
+ /db_xref="GI:161504550"
+ /translation="MNESYRQFEDWWSKDKSQFTDDDELKNFSWVIWQASRAAIEIEL
+ PTKNDISDDDYPIPDLVDWDDGRNAGIQECAEAIRAAGIKVKE"
+ gene complement(2584231..2585667)
+ /locus_tag="SARI_02664"
+ CDS complement(2584231..2585667)
+ /locus_tag="SARI_02664"
+ /inference="protein motif:BlastProDom:IPR007694"
+ /inference="protein motif:Gene3D:IPR007693"
+ /inference="protein motif:HMMPfam:IPR007693"
+ /inference="protein motif:HMMPfam:IPR007694"
+ /inference="similar to AA sequence:INSD:BAB34613.1"
+ /note="'KEGG: ecs:ECs1190 3.9e-249 replication protein P
+ K02314;
+ COG: COG0305 Replicative DNA helicase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571663.1"
+ /db_xref="GI:161504551"
+ /db_xref="InterPro:IPR007693"
+ /db_xref="InterPro:IPR007694"
+ /translation="MTDNFYAPPHSIEAEQAVIGGLLLDDDSSERVQKVLAMLKPDSF
+ YSRPHKILFEEIIRMHREQKPVDGLTLFDELERKSLTVSVGGFAYIAEIAKNTPSAAN
+ IVAYAMQVRETAMERYAINRMTEATELLYSRNGMTATQKYEAIQAIFTQLTDHAKTGS
+ RRGLRSFGEVMEDWVSDLEKRFDPSGKQRGMSTGIPSLDRMLSPKGLVKGSLFVIGAR
+ PKMGKTTLYSQMAINCAVHEKKTALMFSLEMPGDQILEKLVGQKSGVNPNIFYLPATN
+ DADDGYQGDYDGDFNMAIETANRLSEIDLLYIDDTPGLSLAQIVSESRRIKREKGCVG
+ MILVDYLTLMTAEKADRNDLAYGMITKGLKNLAKELDCVVVLLTQLNRELEKRTNKRP
+ LPSDSRDTGQIEQDCDYWVGIHREGAFDDSVPPGETELILRLNRHGNTGTVYYIQENG
+ AIYDTDQQSAEMRRREREEPQAKKKGGF"
+ misc_feature complement(2585332..2585649)
+ /locus_tag="SARI_02664"
+ /note="DnaB-like helicase N terminal domain; Region: DnaB;
+ pfam00772"
+ /db_xref="CDD:216111"
+ misc_feature complement(2584327..2585637)
+ /locus_tag="SARI_02664"
+ /note="phage replicative helicase, DnaB family, HK022
+ subfamily; Region: phage_DnaB; TIGR03600"
+ /db_xref="CDD:213836"
+ misc_feature complement(2584336..2585082)
+ /locus_tag="SARI_02664"
+ /note="RecA-like NTPases. This family includes the NTP
+ binding domain of F1 and V1 H+ATPases, DnaB and related
+ helicases as well as bacterial RecA and related eukaryotic
+ and archaeal recombinases. This group also includes
+ bacterial conjugation proteins and...; Region:
+ RecA-like_NTPases; cl17233"
+ /db_xref="CDD:247787"
+ misc_feature complement(order(2584996..2585004,2585014..2585019))
+ /locus_tag="SARI_02664"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:238540"
+ misc_feature complement(order(2584648..2584653,2584927..2584932,
+ 2584936..2584938,2584996..2585004,2585014..2585016))
+ /locus_tag="SARI_02664"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238540"
+ misc_feature complement(2584651..2584665)
+ /locus_tag="SARI_02664"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:238540"
+ gene complement(2585657..2586556)
+ /locus_tag="SARI_02665"
+ CDS complement(2585657..2586556)
+ /locus_tag="SARI_02665"
+ /inference="similar to AA sequence:REFSEQ:YP_151604.1"
+ /note="'COG: NOG24180 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571664.1"
+ /db_xref="GI:161504552"
+ /translation="MSNISNLAEAREARRLQKPRTNGGKGFALIHRQFMDSKLYKDSQ
+ AVHLFLHLILKANHSPAVVNTDIGEMVVERGQLITGRPKLVSETFIPDNKVKSLLRSF
+ EGNGMIRIESKGRKFSLITVLKYDDFQAPNCPTDVQRLSNVNTSNDAAHSECCPTDVQ
+ RLSINNNINNISNTNVLESTAADENPDKKKSSLSCQDVVDAYHELLPEASRVRALNDK
+ RKNQIRTFWRKAGVITRQLDGHGFTMQDWKNYLSYVGENCRWMFEERQNHQRGTVWRK
+ KGFDFLLNDNTYLKVREGEHDDR"
+ gene complement(2586549..2586695)
+ /locus_tag="SARI_02666"
+ CDS complement(2586549..2586695)
+ /locus_tag="SARI_02666"
+ /inference="similar to AA sequence:REFSEQ:NP_059609.1"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571665.1"
+ /db_xref="GI:161504553"
+ /translation="MPKQLSPDQDKLHKNILRDRFLSSFKQPGRFRAELEKVKLILKR
+ KGHE"
+ misc_feature complement(2586552..2586695)
+ /locus_tag="SARI_02666"
+ /note="Protein of unknown function (DUF2740); Region:
+ DUF2740; pfam10872"
+ /db_xref="CDD:151321"
+ gene complement(2586730..2587008)
+ /locus_tag="SARI_02667"
+ CDS complement(2586730..2587008)
+ /locus_tag="SARI_02667"
+ /inference="protein motif:HMMPfam:IPR007933"
+ /inference="similar to AA sequence:INSD:ABO40683.1"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571666.1"
+ /db_xref="GI:161504554"
+ /db_xref="InterPro:IPR007933"
+ /translation="MELTSTRKKANAITSSILNRIAIRGQRKVADALGINESQISRWK
+ GDFIPKMGMLLAVLEWGVEDEELAELAKKVAHLLTKEKAPKNGEFFEA"
+ misc_feature complement(2586736..2587008)
+ /locus_tag="SARI_02667"
+ /note="Bacteriophage CII protein; Region: Phage_CII;
+ pfam05269"
+ /db_xref="CDD:114018"
+ gene complement(2587144..2587371)
+ /locus_tag="SARI_02668"
+ CDS complement(2587144..2587371)
+ /locus_tag="SARI_02668"
+ /inference="protein motif:superfamily:IPR009061"
+ /inference="similar to AA sequence:REFSEQ:NP_049486.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571667.1"
+ /db_xref="GI:161504555"
+ /db_xref="InterPro:IPR009061"
+ /translation="MQNLDEPIKGIGIPEVARACGVSERAVYKWLKNGFLPKTEFFGK
+ TRYASKIEEISGGKFQAVDLLEISKKNLLSA"
+ misc_feature complement(<2587231..2587335)
+ /locus_tag="SARI_02668"
+ /note="Helix-turn-helix domain; Region: HTH_17; pfam12728"
+ /db_xref="CDD:205047"
+ gene 2587449..2588159
+ /locus_tag="SARI_02669"
+ CDS 2587449..2588159
+ /locus_tag="SARI_02669"
+ /inference="protein motif:HMMPfam:IPR001387"
+ /inference="protein motif:HMMPfam:IPR006198"
+ /inference="protein motif:HMMSmart:IPR001387"
+ /inference="protein motif:superfamily:IPR010982"
+ /inference="protein motif:superfamily:IPR011056"
+ /inference="similar to AA sequence:REFSEQ:NP_049485.1"
+ /note="'KEGG: cya:CYA_1992 0.0010 peptidase, S24 (LexA)
+ family;
+ COG: COG2932 Predicted transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571668.1"
+ /db_xref="GI:161504556"
+ /db_xref="InterPro:IPR001387"
+ /db_xref="InterPro:IPR006198"
+ /db_xref="InterPro:IPR010982"
+ /db_xref="InterPro:IPR011056"
+ /translation="MVQNEKVRQEFAQRLAQACKEAGLDEHGRGIAIARALDVSSKGV
+ SKWFNAESLPRQEKMNALANFLKVDVVWLQHGSVRQSTTTDPQSLTFVGQLRKGLVRV
+ VGEAILGVDGAIEMTEERDGWLKIYSDDPEAFGLRVKGDSMWPRIKSGEYVLIEPNTK
+ VCPGDEVFVRTIEGHNMIKVLGYDRDGEYQFTSINQDHRPITLPYYEVSKVEYVAGIL
+ KQSRHLDDIEAREWLRNN"
+ misc_feature 2587482..2587667
+ /locus_tag="SARI_02669"
+ /note="Helix-turn-helix XRE-family like proteins.
+ Prokaryotic DNA binding proteins belonging to the
+ xenobiotic response element family of transcriptional
+ regulators; Region: HTH_XRE; cd00093"
+ /db_xref="CDD:238045"
+ misc_feature order(2587494..2587496,2587506..2587508,2587593..2587595)
+ /locus_tag="SARI_02669"
+ /note="non-specific DNA binding site [nucleotide binding];
+ other site"
+ /db_xref="CDD:238045"
+ misc_feature order(2587503..2587505,2587590..2587592)
+ /locus_tag="SARI_02669"
+ /note="salt bridge; other site"
+ /db_xref="CDD:238045"
+ misc_feature 2587521..2588123
+ /locus_tag="SARI_02669"
+ /note="Predicted transcriptional regulator
+ [Transcription]; Region: COG2932"
+ /db_xref="CDD:225484"
+ misc_feature order(2587536..2587541,2587572..2587574,2587581..2587583,
+ 2587593..2587598)
+ /locus_tag="SARI_02669"
+ /note="sequence-specific DNA binding site [nucleotide
+ binding]; other site"
+ /db_xref="CDD:238045"
+ misc_feature 2587848..2588090
+ /locus_tag="SARI_02669"
+ /note="Peptidase S24 LexA-like proteins are involved in
+ the SOS response leading to the repair of single-stranded
+ DNA within the bacterial cell. This family includes: the
+ lambda repressor CI/C2 family and related bacterial
+ prophage repressor proteins; LexA (EC...; Region:
+ S24_LexA-like; cd06529"
+ /db_xref="CDD:119397"
+ misc_feature order(2587872..2587874,2587983..2587985)
+ /locus_tag="SARI_02669"
+ /note="Catalytic site [active]"
+ /db_xref="CDD:119397"
+ gene 2588320..2589399
+ /locus_tag="SARI_02670"
+ CDS 2588320..2589399
+ /locus_tag="SARI_02670"
+ /inference="similar to AA sequence:INSD:BAD15185.1"
+ /note="'COG: NOG08577 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571669.1"
+ /db_xref="GI:161504557"
+ /translation="MQAHFTTKSACIMSDKESKEPTGKSKGGVARANALSAEERSAIA
+ RKAAAARWGGDGEVEIAKRSGDIVIGDLKIQCAVLEDGTRVLSERAITKAFGGKRGGS
+ HWKRMKENPDGAYLPVFLSAKNIKPFINNELSEGLSRRRLFKINKGAAPAYGIEASLL
+ PKICNVYLKMRDQGDALQSSQIPISVQADIIMRGLAEVGIVALVDEATGHIDEKRQDE
+ YRILFQEFIKEQVREYEKEFPKQFTDGLYRLYGLTQKKAGRHPQFFGKFTRKYIYEPL
+ ASSKGAILEMLDEKNPVVYANGGRRYKMFQFLTDSIGVPMFRAHLWQVVGILSSSRNK
+ AEFDRAFKRAFPSPGTQFELLDEDE"
+ misc_feature 2588983..2589270
+ /locus_tag="SARI_02670"
+ /note="P63C domain; Region: P63C; pfam10546"
+ /db_xref="CDD:220804"
+ gene complement(2589439..2589642)
+ /locus_tag="SARI_02671"
+ CDS complement(2589439..2589642)
+ /locus_tag="SARI_02671"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571670.1"
+ /db_xref="GI:161504558"
+ /translation="MKSEEEFFAELHPQVVEVLGIALMQVLVEQREPSREALIEMIQV
+ LWQEEDVDLAVELAIDVLTLPKE"
+ gene 2589984..2590346
+ /locus_tag="SARI_02672"
+ CDS 2589984..2590346
+ /locus_tag="SARI_02672"
+ /inference="similar to AA sequence:REFSEQ:NP_851956.1"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571671.1"
+ /db_xref="GI:161504559"
+ /translation="MTRRTAFNGSAAGRRRERRAALQNAVTASSEVLHRPTLSRVQIQ
+ AKGKHETPKRIEDAKSLQFMAKDAFWQLEEYRRHLERAAIVYANEFGHKPPETGVCLP
+ EVALYAAGHRKCRQVTAR"
+ gene 2590424..2591704
+ /locus_tag="SARI_02673"
+ CDS 2590424..2591704
+ /locus_tag="SARI_02673"
+ /inference="protein motif:BlastProDom:IPR008165"
+ /inference="similar to AA sequence:REFSEQ:YP_248962.1"
+ /note="'KEGG: cal:orf19.4072 8.0e-25 HYR10; similar to
+ cell surface flocculin K01186;
+ COG: COG5164 Transcription elongation factor;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571672.1"
+ /db_xref="GI:161504560"
+ /db_xref="InterPro:IPR008165"
+ /translation="MTKESVTFKGFNKDLKCRGFQFAIGETFHHDGKVEACGSGFHAC
+ ECPFDVFSYYPPSESRYAETISFGVTDREEGGDTKIASASITIKAELTLPQFIQRGIE
+ WIWSKIDKSLEQQIMTGYRSAATNTGNQSAATNTGYRSAATNTGNQSAATNTGDQSAA
+ TNTGNWSAATNTGNRSAATNTGDQSAATNTGNWSAATNTGNRSAATNTGNQSAATNTG
+ YRSAATNTGNWSAATNTGYRSAATNTGNQSAATNTGDQSAATNTGNWSAATNTGYRSA
+ ATNTGNWSAATNTGYRSAATNTGNQSAATNTGDQSAATNTGNWSAATNTGYRSAATNT
+ GNWSAATNTGDQSAATNTGYQSAAEVSGSQSVAASLGIEGKARASEGGAIVLCYRDED
+ GELIHIRASKVGENGIMPDTWYQLDEDGEFVECE"
+ misc_feature 2590703..2591239
+ /locus_tag="SARI_02673"
+ /note="hypothetical protein; Provisional; Region:
+ PRK09946"
+ /db_xref="CDD:182159"
+ misc_feature <2591183..2591698
+ /locus_tag="SARI_02673"
+ /note="hypothetical protein; Provisional; Region:
+ PRK09946"
+ /db_xref="CDD:182159"
+ unsure 2590778..2591500
+ /locus_tag="SARI_02673"
+ /note="Unresolved tandem repeat."
+ gene 2592041..2592154
+ /locus_tag="SARI_02674"
+ CDS 2592041..2592154
+ /locus_tag="SARI_02674"
+ /inference="protein motif:HMMPfam:IPR010444"
+ /inference="similar to AA sequence:INSD:ABF15035.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571673.1"
+ /db_xref="GI:161504561"
+ /db_xref="InterPro:IPR010444"
+ /translation="MDKSLMAIQSKFAIAVYLGDKIMYREAVEAFREWRLK"
+ misc_feature 2592041..2592148
+ /locus_tag="SARI_02674"
+ /note="Bacteriophage lambda Kil protein; Region:
+ Lambda_Kil; pfam06301"
+ /db_xref="CDD:148109"
+ gene 2592348..2593055
+ /locus_tag="SARI_02675"
+ CDS 2592348..2593055
+ /locus_tag="SARI_02675"
+ /inference="protein motif:HMMPfam:IPR007232"
+ /inference="similar to AA sequence:INSD:AAW70520.1"
+ /note="'COG: COG4712 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571674.1"
+ /db_xref="GI:161504562"
+ /db_xref="InterPro:IPR007232"
+ /translation="MDLNKFDAPFNPEDIEWRIQQSGKTRDGKVWAMVLAYVTNRAIM
+ KRLDDVCGKAGWRNEYRDIPNNGGVECGISIKIDSEWVTKWDAAENTQVEAVKGGRSG
+ AMKRAAVQWGIGRYLYNLEEGFAQTSLDKKQGWHRAKLKDGTGFYWSPPSLPGWAMPT
+ SCNQPSPENTSQKSTSVDCEQILKDFSEYAATETDRKKLIERYQHCWQLLAGNDDAQT
+ KCVQVMNIRINELKQVA"
+ misc_feature 2592369..2593007
+ /locus_tag="SARI_02675"
+ /note="Rad52/22 family double-strand break repair protein;
+ Region: Rad52_Rad22; cl01936"
+ /db_xref="CDD:242788"
+ gene 2593055..2593339
+ /locus_tag="SARI_02676"
+ CDS 2593055..2593339
+ /locus_tag="SARI_02676"
+ /inference="protein motif:HMMPfam:IPR013249"
+ /inference="similar to AA sequence:INSD:AAV78305.1"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571675.1"
+ /db_xref="GI:161504563"
+ /db_xref="InterPro:IPR013249"
+ /translation="MRRLNITPAEMESVCGRMVACRAAEHLGLNINQFYYIAKKLSLK
+ TAFVKPRWSEDEDKRMQVLISSGYTQRDVAKILGRSEESVKSRLSRLRKK"
+ misc_feature <2593253..2593336
+ /locus_tag="SARI_02676"
+ /note="Sigma-70, region 4; Region: Sigma70_r4_2;
+ pfam08281"
+ /db_xref="CDD:203898"
+ gene 2593386..2593679
+ /locus_tag="SARI_02677"
+ CDS 2593386..2593679
+ /locus_tag="SARI_02677"
+ /inference="similar to AA sequence:INSD:DAA01009.1"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571676.1"
+ /db_xref="GI:161504564"
+ /translation="MPAPLYGADDPRRCSGKSVSEVLDKFRRNYDLIMSLPQETKEEK
+ EFRHCIWLAEKEERERIYQTAIRPFRKATYTKFIEIDPRLRDYRSRYGAISNN"
+ misc_feature 2593386..2593676
+ /locus_tag="SARI_02677"
+ /note="Protein of unknown function (DUF2856); Region:
+ DUF2856; pfam11043"
+ /db_xref="CDD:151490"
+ gene 2593848..2594354
+ /locus_tag="SARI_02678"
+ CDS 2593848..2594354
+ /locus_tag="SARI_02678"
+ /inference="similar to AA sequence:INSD:AAW70514.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571677.1"
+ /db_xref="GI:161504565"
+ /translation="MQQVKIYTASPSDLSPPVQSESFCVDLVLASDYRELEAKCAALV
+ VENGALKKSEVEFNDYCRHECEDVGDTWVDDFTETPATDAFLAEVRASARNEGINYAA
+ SRLAAAFNHGFLNKPVSEVLDVTRMILSAKEDLSNDPLPADDGLSGEYAEKSIEEWAA
+ QLRKGVQS"
+ gene 2594427..2594822
+ /locus_tag="SARI_02679"
+ CDS 2594427..2594822
+ /locus_tag="SARI_02679"
+ /inference="similar to AA sequence:SwissProt:Q03548"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571678.1"
+ /db_xref="GI:161504566"
+ /translation="MIQKITNARASPMSNIDKLNDHELVDLKNAIERELKRRADGPKV
+ TTYYVVSCITDAQHFTDLDCALRCLKRVTEDLMEWVAESPENRDYVNRCTGIVGAKLQ
+ VEEMNLDHFNMCVAEKYFDDIYYPQETAQ"
+ gene 2594819..2595478
+ /locus_tag="SARI_02680"
+ CDS 2594819..2595478
+ /locus_tag="SARI_02680"
+ /inference="similar to AA sequence:INSD:AAW70512.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571679.1"
+ /db_xref="GI:161504567"
+ /translation="MSNIDKQALRERYSPRPVPKCHICGEEMTIQRISASRITYGCTG
+ EGNDGYFKFGRTFADEHYEKSRVTVVDVSDPDVLELLDELEHYKSREERVTKLVLDNS
+ TSWDVLYEKLEAAERRIAEMDRDCWTYENTVKTLLERAESAESACTEAARILKSGERM
+ ALTRAVNILLSVGEDTTPYRYPVVLPEPLGFKPPSGRDVLLKNDVIAALMSAGVPVER
+ G"
+ misc_feature 2594822..2595208
+ /locus_tag="SARI_02680"
+ /note="Ead/Ea22-like protein; Region: Ead_Ea22; pfam13935"
+ /db_xref="CDD:222463"
+ gene 2595480..2595749
+ /locus_tag="SARI_02681"
+ CDS 2595480..2595749
+ /locus_tag="SARI_02681"
+ /inference="similar to AA sequence:INSD:AAO06108.1"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571680.1"
+ /db_xref="GI:161504568"
+ /translation="MCNFHERKVRRTEYYQRFVFGWKLRVELEAAKKRIAELEAKLET
+ ADKLQDSAFRDGLKAGFSYGQTDDQSGFAQCMSAYSTRAGIKVKG"
+ gene 2595752..2595937
+ /locus_tag="SARI_02682"
+ CDS 2595752..2595937
+ /locus_tag="SARI_02682"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571681.1"
+ /db_xref="GI:161504569"
+ /translation="MAYKLKMRAEDVEPGDVVITSHGTRYTVKSFWMEDGKVTLFGAD
+ GSETEYDYYDMLNVERD"
+ gene 2595941..2596366
+ /locus_tag="SARI_02683"
+ CDS 2595941..2596366
+ /locus_tag="SARI_02683"
+ /inference="protein motif:HMMPfam:IPR002711"
+ /inference="similar to AA sequence:REFSEQ:ZP_00925223.1"
+ /note="'COG: NOG18119 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571682.1"
+ /db_xref="GI:161504570"
+ /db_xref="InterPro:IPR002711"
+ /translation="MTTITKKQRAELRMKFGGRCAYCGCELPEKGWHADHVEAVLRKS
+ EQCMKAAAKGIFKLKATGEFYRPEAERLENLFPACAPCNLLKASYSLEMFREQVSLQV
+ ERGRKSSMNFRTAERFGLIEAVEKPVVFWFEQYQEGVAV"
+ misc_feature 2595983..2596198
+ /locus_tag="SARI_02683"
+ /note="HNH nucleases; HNH endonuclease signature which is
+ found in viral, prokaryotic, and eukaryotic proteins. The
+ alignment includes members of the large group of homing
+ endonucleases, yeast intron 1 protein, MutS, as well as
+ bacterial colicins, pyocins, and...; Region: HNHc;
+ cd00085"
+ /db_xref="CDD:238038"
+ misc_feature order(2596037..2596039,2596043..2596051,2596100..2596102,
+ 2596160..2596165,2596175..2596180,2596187..2596189)
+ /locus_tag="SARI_02683"
+ /note="active site"
+ /db_xref="CDD:238038"
+ gene 2596363..2596800
+ /locus_tag="SARI_02684"
+ CDS 2596363..2596800
+ /locus_tag="SARI_02684"
+ /inference="similar to AA sequence:INSD:AAW70508.1"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571683.1"
+ /db_xref="GI:161504571"
+ /translation="MSTITNNKLPDERVSNATLIRLIQWADQHNSHYVAAALCELQER
+ RKADSEPAGYHVIKECGKVGCSVATLEEAEKTRDFWNKRWAIRPYFYPPPARDNKQTD
+ ELVMWVKRLAHSLRNARPNSKLHSAAMDYLSRKGLISVEDVLR"
+ gene 2596797..2597447
+ /locus_tag="SARI_02685"
+ CDS 2596797..2597447
+ /locus_tag="SARI_02685"
+ /inference="similar to AA sequence:REFSEQ:NP_112038.1"
+ /note="'COG: NOG13881 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571684.1"
+ /db_xref="GI:161504572"
+ /translation="MTTITRERLLKIQQWRETYGAGSNVMLPAEEAEELARIALAALE
+ ADPEPVVPESISVRQAISALESADCVTTIGQAYKMGWNACRAAMLHGAEPVSQTYNLP
+ ELIEGMEVSIDVSTCDADAGNRYFGTVTEVSELYTAKNGYILLVQDAEPNFDVNGNSP
+ VSPDGYALVPVEPTDEMIAAAMNCEDVLFNSDESFCVQFGNIYESMLAAAPQHEVK"
+ gene 2597512..2597790
+ /locus_tag="SARI_02686"
+ CDS 2597512..2597790
+ /locus_tag="SARI_02686"
+ /inference="similar to AA sequence:REFSEQ:NP_569567.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571685.1"
+ /db_xref="GI:161504573"
+ /translation="MVDKMGGKVPNYQIVYRDETLNYFKPGGYVFFQRLKEYGGGYWL
+ GKIYEDGFEFVLERPTSLSEGIKHLLVLKSVEDGYLEFVDDIDNFKLQ"
+ gene 2598032..2598385
+ /locus_tag="SARI_02687"
+ CDS 2598032..2598385
+ /locus_tag="SARI_02687"
+ /inference="similar to AA sequence:INSD:CAD91810.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571686.1"
+ /db_xref="GI:161504574"
+ /translation="MMSDLAMKVLKWQTKGHVGISSATMASIALGLEKNFYHGRFDAP
+ SDPADLRRCMMLVDEIPEIKDSFPLIAKKVKRFSPILREWDSLIALLKFELKRPDKRA
+ PKTYKWIKELLSDQE"
+ unsure 2598574..2598655
+ /note="Sequence derived from one plasmid subclone"
+ gene 2598615..2599778
+ /locus_tag="SARI_02688"
+ CDS 2598615..2599778
+ /locus_tag="SARI_02688"
+ /inference="protein motif:Gene3D:IPR013762"
+ /inference="protein motif:HMMPfam:IPR002104"
+ /inference="protein motif:superfamily:IPR010998"
+ /inference="protein motif:superfamily:IPR011010"
+ /inference="similar to AA sequence:INSD:AAW70505.1"
+ /note="'COG: COG0582 Integrase;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571687.1"
+ /db_xref="GI:161504575"
+ /db_xref="InterPro:IPR002104"
+ /db_xref="InterPro:IPR010998"
+ /db_xref="InterPro:IPR011010"
+ /db_xref="InterPro:IPR013762"
+ /translation="MSLFRRGETWYASFTLPDGKRFKQSLGTTDKRQATELHDRLKAE
+ AWRVSKLGETPDMTFEEACVRWLEEKAHKKSLDDDKSRIGFWLQHFAGIQLKDITETK
+ IYSAIQKMTNRRHEENWKMMEEACRKKGKQPPVFKPKPAAIATKATHLSFIKALLRTA
+ EREWKMLDKAPIVKVPQPKNKRIRWLEPHEAKRLIDECPEPLKSVVEFALSTGLRRSN
+ IINLEWQQIDMQRKVAWIHPEQSKSNQAIGVALNDTACRVLKKQIGNHHKWVFVYKES
+ STKPDRTKSPVVRKMRYDANTAWRAALKRAGIEDFRFHDLRHTWASWLVQAGVPISVL
+ QEMGGWESIEMVRRYAHLAPNHLTEHARQIDSIFDTSVPNMSHGKNKEGTNNT"
+ misc_feature 2598807..2599697
+ /locus_tag="SARI_02688"
+ /note="Integrase [DNA replication, recombination, and
+ repair]; Region: XerC; COG0582"
+ /db_xref="CDD:223655"
+ misc_feature 2599152..2599718
+ /locus_tag="SARI_02688"
+ /note="P22-like integrases, site-specific recombinases,
+ DNA breaking-rejoining enzymes, C-terminal catalytic
+ domain. This CD includes various bacterial and phage
+ integrases, including those similar to phage P22-like
+ integrases, DLP12 and APSE-1; Region: INT_P22_C; cd01192"
+ /db_xref="CDD:238597"
+ misc_feature order(2599257..2599259,2599338..2599340,2599554..2599556,
+ 2599563..2599565,2599632..2599634,2599659..2599661)
+ /locus_tag="SARI_02688"
+ /note="Int/Topo IB signature motif; other site"
+ /db_xref="CDD:238597"
+ gene complement(2599796..2599868)
+ /locus_tag="SARI_02689"
+ tRNA complement(2599796..2599868)
+ /locus_tag="SARI_02689"
+ /product="tRNA-Thr"
+ unsure 2599914..2600009
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(2599985..2601235)
+ /gene="proA"
+ /locus_tag="SARI_02690"
+ CDS complement(2599985..2601235)
+ /gene="proA"
+ /locus_tag="SARI_02690"
+ /inference="protein motif:HMMPanther:IPR012134"
+ /inference="protein motif:HMMPIR:IPR012134"
+ /inference="protein motif:HMMTigr:IPR000965"
+ /inference="protein motif:ScanRegExp:IPR000965"
+ /inference="similar to AA sequence:INSD:AAV78313.1"
+ /note="Catalyzes the phosphorylation of L-glutamate during
+ the proline biosynthesis pathway"
+ /codon_start=1
+ /transl_table=11
+ /product="gamma-glutamyl phosphate reductase"
+ /protein_id="YP_001571688.1"
+ /db_xref="GI:161504576"
+ /db_xref="InterPro:IPR000965"
+ /db_xref="InterPro:IPR012134"
+ /translation="MLEQMGIAAKAASYKLALLSSREKNRVLEKIADELESQTETILS
+ ANAQDVAQARENGLSDAMLDRLALTPARLKSIADDVRQVCHLTDPVGQVIDGGLLDSG
+ LRLERRRVPLGVIGVIYEARPNVTVDVASLCLKTGNAVILRGGKETHRTNAATVRVIQ
+ KALKACGLPEAAVQAIDNPDRSLVNEMLRMDKYIDMLIPRGGAGLHKLCREQSTIPVI
+ TGGIGVCHIFVDSSAEIAPALEIIVNAKTQRPSTCNTVETLLVHQDIAERFLPVLSQQ
+ MAESDVTLHGDERVMQIMKGPAKRIPLKPEELDNEFLSLDLNVVMVMNIDHAINHIRE
+ HGTQHSDAILTCDMHNAARFVNEVDSAAVYVNASTRFTDGGQFGLGAEVAVSTQKLHA
+ RGPMGLEALTTYKWIGFGDGTIRA"
+ misc_feature complement(2600003..2601172)
+ /gene="proA"
+ /locus_tag="SARI_02690"
+ /note="Gamma-glutamyl phosphate reductase (GPR), aldehyde
+ dehydrogenase families 18 and 19; Region:
+ ALDH_F18-19_ProA-GPR; cd07079"
+ /db_xref="CDD:143398"
+ misc_feature complement(2600021..2601172)
+ /gene="proA"
+ /locus_tag="SARI_02690"
+ /note="gamma-glutamyl phosphate reductase; Region: proA;
+ TIGR00407"
+ /db_xref="CDD:161862"
+ misc_feature complement(2600477..2600479)
+ /gene="proA"
+ /locus_tag="SARI_02690"
+ /note="putative catalytic cysteine [active]"
+ /db_xref="CDD:143398"
+ gene complement(2601247..2602350)
+ /locus_tag="SARI_02691"
+ CDS complement(2601247..2602350)
+ /locus_tag="SARI_02691"
+ /inference="protein motif:Gene3D:IPR001048"
+ /inference="protein motif:HMMPfam:IPR001048"
+ /inference="protein motif:HMMPfam:IPR002478"
+ /inference="protein motif:HMMPIR:IPR011529"
+ /inference="protein motif:HMMSmart:IPR002478"
+ /inference="protein motif:HMMTigr:IPR005715"
+ /inference="protein motif:ScanRegExp:IPR001057"
+ /inference="protein motif:superfamily:IPR001048"
+ /inference="similar to AA sequence:INSD:AAX64228.1"
+ /note="catalyzes the formation of glutamate 5-phosphate
+ from glutamate in proline biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="gamma-glutamyl kinase"
+ /protein_id="YP_001571689.1"
+ /db_xref="GI:161504577"
+ /db_xref="InterPro:IPR001048"
+ /db_xref="InterPro:IPR001057"
+ /db_xref="InterPro:IPR002478"
+ /db_xref="InterPro:IPR005715"
+ /db_xref="InterPro:IPR011529"
+ /translation="MSDSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHR
+ IVIVTSGAIAAGREHLGYPELPVTIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQML
+ LTRADMEDRERFLNARDMLRALLDNHIVPIINENDAVATVEIKVGDNDNLSALAAILA
+ GADKLLLLTDQQGLFTADPRSNPQAELIKDVYGVDDALRSIAGDSVSGLGTGGMSTKL
+ QAADVACRAGIDTIIASGSKPGVIGDVMEGNSVGTRFHAQASPLENRKRWIFGAPPAG
+ EITVDEGATAAILERGSSLLPKGIKSVTGNFSRGEVIRICNQQGRDIAHGVSRYNSDA
+ LRRIAGHHSQQIDAILGYEYGPVAVHRDDMITR"
+ misc_feature complement(2601256..2602350)
+ /locus_tag="SARI_02691"
+ /note="gamma-glutamyl kinase; Provisional; Region:
+ PRK05429"
+ /db_xref="CDD:235460"
+ misc_feature complement(2601583..2602335)
+ /locus_tag="SARI_02691"
+ /note="AAK_G5K_ProB: Glutamate-5-kinase (G5K) catalyzes
+ glutamate-dependent ATP cleavage; G5K transfers the
+ terminal phosphoryl group of ATP to the gamma-carboxyl
+ group of glutamate, in the first and controlling step of
+ proline (and, in mammals, ornithine)...; Region:
+ AAK_G5K_ProB; cd04242"
+ /db_xref="CDD:239775"
+ misc_feature complement(order(2601700..2601702,2601712..2601714,
+ 2601718..2601720,2601826..2601831,2601838..2601846,
+ 2602309..2602311))
+ /locus_tag="SARI_02691"
+ /note="nucleotide binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:239775"
+ misc_feature complement(order(2601934..2601939,2601943..2601945,
+ 2601973..2601975,2601982..2601984,2602000..2602005,
+ 2602045..2602047,2602051..2602053,2602120..2602122,
+ 2602132..2602134,2602222..2602224,2602231..2602236))
+ /locus_tag="SARI_02691"
+ /note="homotetrameric interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:239775"
+ misc_feature complement(2602177..2602200)
+ /locus_tag="SARI_02691"
+ /note="putative phosphate binding site [ion binding];
+ other site"
+ /db_xref="CDD:239775"
+ misc_feature complement(order(2601907..2601909,2601940..2601942,
+ 2602195..2602197))
+ /locus_tag="SARI_02691"
+ /note="putative allosteric binding site; other site"
+ /db_xref="CDD:239775"
+ misc_feature complement(2601301..2601525)
+ /locus_tag="SARI_02691"
+ /note="PUA domain; Region: PUA; pfam01472"
+ /db_xref="CDD:201816"
+ gene 2602627..2603685
+ /locus_tag="SARI_02692"
+ CDS 2602627..2603685
+ /locus_tag="SARI_02692"
+ /inference="protein motif:HMMPfam:IPR001702"
+ /inference="protein motif:ScanRegExp:IPR013793"
+ /inference="similar to AA sequence:INSD:AAV78315.1"
+ /note="'COG: COG3203 Outer membrane protein (porin);
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="outer membrane phosphoporin protein E"
+ /protein_id="YP_001571690.1"
+ /db_xref="GI:161504578"
+ /db_xref="InterPro:IPR001702"
+ /db_xref="InterPro:IPR013793"
+ /translation="MEMKKSTLAIAVSIIASASVHAAEVYNKNDNKLDVYGKVKAMHY
+ MSDYGSKDGDQSYVRFGFKGETQINDQLTGYGRWEAEFAGNKAESDSSQQKTRLAFAG
+ LKLKDIGSFDYGRNLGVLYDVEAWTDMFPEFGGDSSAQTDNFMTKRASGLATYRNTDF
+ FGIVDGLDLTLQYQGKNEDRDMKKQNGDGFGASLSYDFGGSDFAVSGAYTHSDRTNEQ
+ NQQRRGIGDKAEAWATGLKYDANDIYIATFYAETRNMTPVSGGFANKTQNFEAVIQYQ
+ FDFGLRPSLGYVLSKGKDIEGVGSEDLVNYIDVGATYYFNKNMSAFVDYKINQLDSDN
+ TLGINDDDIVAVGLTYQF"
+ misc_feature 2602702..2603682
+ /locus_tag="SARI_02692"
+ /note="Outer membrane protein (porin) [Cell envelope
+ biogenesis, outer membrane]; Region: OmpC; COG3203"
+ /db_xref="CDD:225744"
+ misc_feature 2602717..2603682
+ /locus_tag="SARI_02692"
+ /note="Porins form aqueous channels for the diffusion of
+ small hydrophillic molecules across the outer membrane.
+ Individual 16-strand anti-parallel beta-barrels form a
+ central pore, and trimerizes thru mainly hydrophobic
+ interactions at the interface. Trimers...; Region:
+ gram_neg_porins; cd00342"
+ /db_xref="CDD:238208"
+ misc_feature order(2602717..2602719,2602723..2602725,2602741..2602743,
+ 2602747..2602755,2602816..2602830,2602846..2602848,
+ 2602852..2602860,2602864..2602866,2602870..2602881,
+ 2602912..2602917,2602921..2602935,2602963..2602971,
+ 2603068..2603070,2603074..2603079,2603569..2603574,
+ 2603581..2603583,2603668..2603670,2603674..2603676,
+ 2603680..2603682)
+ /locus_tag="SARI_02692"
+ /note="trimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238208"
+ misc_feature order(2602738..2602740,2602801..2602803,2602915..2602917,
+ 2603008..2603010,2603068..2603070)
+ /locus_tag="SARI_02692"
+ /note="eyelet of channel; other site"
+ /db_xref="CDD:238208"
+ gene complement(2603737..2604138)
+ /locus_tag="SARI_02693"
+ CDS complement(2603737..2604138)
+ /locus_tag="SARI_02693"
+ /inference="protein motif:HMMPfam:IPR009986"
+ /inference="similar to AA sequence:INSD:AAL19275.1"
+ /note="involved in the expression of csgBA which is
+ involved in curli formation; interacts with sigmaS"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional regulator Crl"
+ /protein_id="YP_001571691.1"
+ /db_xref="GI:161504579"
+ /db_xref="InterPro:IPR009986"
+ /translation="MTLPSGHPKSRLIKKFTALGPYIREGQCEDNRFFFDCLAVCVNV
+ KPAPEKREFWGWWMELEAQEKSFTYRYQFGLFDKEGNWTAVPIKETEVVERLEYTLRE
+ FHGKLRDLLISMGLALEPSDDFNDEPVKLSA"
+ misc_feature complement(2603758..2604138)
+ /locus_tag="SARI_02693"
+ /note="DNA-binding transcriptional regulator Crl;
+ Provisional; Region: PRK10984"
+ /db_xref="CDD:182882"
+ gene complement(2604196..2605440)
+ /gene="frsA"
+ /locus_tag="SARI_02694"
+ CDS complement(2604196..2605440)
+ /gene="frsA"
+ /locus_tag="SARI_02694"
+ /inference="protein motif:HMMPfam:IPR010520"
+ /inference="similar to AA sequence:SwissProt:P37722"
+ /note="forms a 1:1 complex with the unphosphorylated from
+ of enzyme IIAGlc; FrsA may promote fermentation"
+ /codon_start=1
+ /transl_table=11
+ /product="fermentation/respiration switch protein"
+ /protein_id="YP_001571692.1"
+ /db_xref="GI:161504580"
+ /db_xref="InterPro:IPR010520"
+ /translation="MTQANLSETLFKPRFKHTETSALVRRFNRGSQPPMQSALDGKNV
+ PHWYRMINRLMWIWRGVDPREILDVQARIVMSDAERTDDDLYDTVIGYRGGNWIYEWA
+ KQAMDWQQKACQEQDAMRSGRYWLHASTLYNIAAYPHLKGDELAEQAQALANRAYEEA
+ AQRLPGSLREMEFAVPGGSPVTAFLHMPKGDGPFPTVLMCGGLDAMQTDYYTLYERYL
+ APRGIAMLTLDMPSVGFSSKWKLTQDSSLIHQHVLKALTNVPWVDHTRVAAFGFRFGA
+ NVAVRLAYLEAPRLKAVACLGPVVHALLSDPQRQSTVPEMYLDVLASRLGMHDASDEA
+ LRVELNRYSLKVQGLLGRRCPTPMLSGFWKNDPFSPEDESRLITSSSSDGKLIEIPFN
+ PVYRNFDKALQEITDWIHHRLC"
+ misc_feature complement(2604199..2605440)
+ /gene="frsA"
+ /locus_tag="SARI_02694"
+ /note="fermentation/respiration switch protein; Reviewed;
+ Region: frsA; PRK05077"
+ /db_xref="CDD:235337"
+ gene complement(2605529..2605987)
+ /locus_tag="SARI_02695"
+ CDS complement(2605529..2605987)
+ /locus_tag="SARI_02695"
+ /inference="protein motif:HMMPfam:IPR000836"
+ /inference="protein motif:ScanRegExp:IPR002375"
+ /inference="similar to AA sequence:REFSEQ:NP_806257.1"
+ /note="'catalyzes the conversion of guanine, xanthine and,
+ to a lesser extent, hypoxanthine to GMP, XMP and IMP,
+ respectively'"
+ /codon_start=1
+ /transl_table=11
+ /product="xanthine-guanine phosphoribosyltransferase"
+ /protein_id="YP_001571693.1"
+ /db_xref="GI:161504581"
+ /db_xref="InterPro:IPR000836"
+ /db_xref="InterPro:IPR002375"
+ /translation="MSEKYVVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGA
+ LLARELGIRHVDTVCISSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIRE
+ MYPKAHFVTIFAKPAGRPLVDDYVIDIPQNTWIEQPWDMGVVFVPPISGR"
+ misc_feature complement(2605601..2605894)
+ /locus_tag="SARI_02695"
+ /note="Phosphoribosyl transferase (PRT)-type I domain;
+ Region: PRTases_typeI; cd06223"
+ /db_xref="CDD:206754"
+ misc_feature complement(order(2605643..2605645,2605700..2605714,
+ 2605718..2605726,2605874..2605876,2605880..2605882))
+ /locus_tag="SARI_02695"
+ /note="active site"
+ /db_xref="CDD:206754"
+ gene 2606200..2607690
+ /locus_tag="SARI_02696"
+ CDS 2606200..2607690
+ /locus_tag="SARI_02696"
+ /inference="protein motif:HMMPfam:IPR002933"
+ /inference="protein motif:HMMPfam:IPR011650"
+ /inference="protein motif:HMMPIR:IPR001160"
+ /inference="protein motif:HMMTigr:IPR001160"
+ /inference="similar to AA sequence:INSD:AAL19272.1"
+ /note="'KEGG: stm:STM0316 1.1e-253 pepD;
+ aminoacyl-histidine dipeptidase K01270;
+ COG: COG2195 Di- and tripeptidases;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571694.1"
+ /db_xref="GI:161504582"
+ /db_xref="InterPro:IPR001160"
+ /db_xref="InterPro:IPR002933"
+ /db_xref="InterPro:IPR011650"
+ /translation="MFFRAPSRRLIVSELSQLSPQPLWDIFAKICSIPHPSYHEEQLA
+ EHIVGWAKEKGLHVERDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNSDTVHDF
+ TKDPIQPYIDGEWVKARGTTLGADNGIGMASALAVLADDNVVHGPLEVLLTMTEEAGM
+ DGAFGLQSGWLQADILINTDSEEEGEIYMGCAGGIDFTSNLALTREAVPAGFAYFKLT
+ LKGLKGGHSGGEIHLGLGNANKLLARFLAGHAEELDLRLIDFNGGTLRNAIPREAFAT
+ LAVAADNVEALKTLVNAYQDILKNELAEKENNLTLQLNDVASDNAALTALSRDTFVRL
+ LNATPNGVIRNSDVAKGVVETSLNVGVVTMSDANVEIHCLIRSLIDSGKDYVVSMLDS
+ LGKLAGAKTEAKGSYPGWQPDANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKK
+ PYPDMDMVSIGPTITGPHSPDEQVHIESVGHYWTLLTELLKAIPAK"
+ misc_feature 2606251..2607678
+ /locus_tag="SARI_02696"
+ /note="Xaa-His dipeptidase; Region: aa-his-dipept;
+ TIGR01893"
+ /db_xref="CDD:233622"
+ misc_feature 2606257..2607678
+ /locus_tag="SARI_02696"
+ /note="M20 Peptidase D has specificity for
+ beta-alanyl-L-histidine dipeptide; Region: M20_pepD;
+ cd03890"
+ /db_xref="CDD:193510"
+ misc_feature order(2606458..2606460,2606575..2606577,2606665..2606670,
+ 2606737..2606739,2607601..2607603)
+ /locus_tag="SARI_02696"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:193510"
+ misc_feature order(2606899..2606901,2606929..2606931,2607088..2607090,
+ 2607100..2607102,2607196..2607201,2607205..2607210,
+ 2607229..2607231,2607238..2607243,2607352..2607354,
+ 2607361..2607366,2607373..2607378)
+ /locus_tag="SARI_02696"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:193510"
+ gene complement(2607950..2609005)
+ /locus_tag="SARI_02697"
+ CDS complement(2607950..2609005)
+ /locus_tag="SARI_02697"
+ /inference="protein motif:HMMPfam:IPR001126"
+ /inference="similar to AA sequence:SwissProt:P63989"
+ /note="involved in translesion DNA polymerization with
+ beta clamp of polymerase III; belongs to Y family of
+ polymerases; does not contain proofreading function"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA polymerase IV"
+ /protein_id="YP_001571695.1"
+ /db_xref="GI:161504583"
+ /db_xref="InterPro:IPR001126"
+ /translation="MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRECRGVISTA
+ NYPARQFGVRSAMPTAMALKLCPHLTLLPGRFDAYKEASRHVRDIFSRYTSLIEPLSL
+ DEAWLDVTDTPHCYGSATLIAREIRQTIFNELQLTASAGVAPVKFLAKIASDLNKPNG
+ QYVITPADVPDFLKTLPLAKIPGVGKVSAAKLESMGLITCGDIQQCDLAMLLKRFGKF
+ GRVLWERSQGIDERDVNSERLRKSVGVERTLAEDIHEWSDCEAIIERLYPELERRLAT
+ VKPDLLIARQGVKLKFNDFQQTTQEHVWPQLNKEDLISTARKTWNERRGDRGVRLVGL
+ HVTLLHPQLERQLVLGL"
+ misc_feature complement(2608040..2608993)
+ /locus_tag="SARI_02697"
+ /note="DNA Polymerase IV/Kappa; Region: PolY_Pol_IV_kappa;
+ cd03586"
+ /db_xref="CDD:176459"
+ misc_feature complement(order(2608535..2608537,2608697..2608699,
+ 2608859..2608861,2608868..2608870,2608877..2608882,
+ 2608967..2608975,2608979..2608984))
+ /locus_tag="SARI_02697"
+ /note="active site"
+ /db_xref="CDD:176459"
+ misc_feature complement(2607953..2608981)
+ /locus_tag="SARI_02697"
+ /note="DNA polymerase IV; Validated; Region: PRK02406"
+ /db_xref="CDD:235035"
+ misc_feature complement(order(2608103..2608114,2608187..2608189,
+ 2608262..2608285,2608352..2608357,2608442..2608462,
+ 2608556..2608558,2608694..2608699,2608703..2608705,
+ 2608832..2608834,2608907..2608909))
+ /locus_tag="SARI_02697"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:176459"
+ unsure 2608308..2608345
+ /note="Sequence derived from one plasmid subclone"
+ gene 2609257..2609997
+ /locus_tag="SARI_02698"
+ CDS 2609257..2609997
+ /locus_tag="SARI_02698"
+ /inference="protein motif:HMMPfam:IPR010355"
+ /inference="similar to AA sequence:INSD:AAL19269.1"
+ /note="'COG: COG3034 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571696.1"
+ /db_xref="GI:161504584"
+ /db_xref="InterPro:IPR010355"
+ /translation="MRKIAFFLAMLLMPCVSLAGLLSSSSPVTPVSKEYKQQLMGSPV
+ YIQIFKEERTLDLYVKMGEQYQLLDSYKICNYSGGLGPKRRQGDFKSPEGFYSVQRNQ
+ LKPDSRFYKAINIGFPNAYDRAHGYDGKYLMIHGACVSVGCYAMTDSGIDEIFQFVTA
+ ALIFGQPSVQVSIYPFRMTDANMQRHKYSYYKDFWAQLKPGYDYFEQTHKPPIVSIVD
+ GRYVVSKPLSHEVVQPQLASNYTLSQAK"
+ misc_feature 2609257..2609994
+ /locus_tag="SARI_02698"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG3034"
+ /db_xref="CDD:225577"
+ misc_feature 2609383..2609733
+ /locus_tag="SARI_02698"
+ /note="L,D-transpeptidase catalytic domain; Region: YkuD;
+ pfam03734"
+ /db_xref="CDD:217702"
+ unsure 2609425..2609463
+ /locus_tag="SARI_02698"
+ /note="Sequence derived from one plasmid subclone"
+ unsure 2609545..2609817
+ /locus_tag="SARI_02698"
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(2609968..2610735)
+ /locus_tag="SARI_02699"
+ CDS complement(2609968..2610735)
+ /locus_tag="SARI_02699"
+ /inference="protein motif:HMMPfam:IPR000583"
+ /inference="similar to AA sequence:INSD:AAL19268.1"
+ /note="'KEGG: reh:H16_A0476 4.4e-67 predicted glutamine
+ amidotransferase class II;
+ COG: COG0121 Predicted glutamine amidotransferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571697.1"
+ /db_xref="GI:161504585"
+ /db_xref="InterPro:IPR000583"
+ /translation="MCELLGMSANVPTDICFSFTGLVQRGGGTGPHKDGWGITFYEGK
+ GCRTFKDPQPSYHSPIAKLVQNYPIKSCSVIAHIRQANRGEVTLENTHPFTRELWGRN
+ WTYAHNGQLTGYRSLETGNFRPVGETDSEKAFCWLLHKLTQRYPRTPCNMTAVFKYIA
+ TLATVLREKGVFNMLLSDGRYVMAFCSTHLHWITRRAPFGVATLVDQDMEIDFSSQTT
+ PNDVVTVIATQPLTGNETWQKIMPGEWALFCLGERVI"
+ misc_feature complement(2609974..2610735)
+ /locus_tag="SARI_02699"
+ /note="Predicted glutamine amidotransferase [General
+ function prediction only]; Region: COG0121"
+ /db_xref="CDD:223199"
+ misc_feature complement(2609983..2610735)
+ /locus_tag="SARI_02699"
+ /note="Glutamine amidotransferases class-II
+ (Gn-AT)_YafJ-type. YafJ is a glutamine
+ amidotransferase-like protein of unknown function found in
+ prokaryotes, eukaryotes and archaea. YafJ has a conserved
+ structural fold similar to those of other class II...;
+ Region: YafJ; cd01908"
+ /db_xref="CDD:238889"
+ misc_feature complement(order(2610349..2610351,2610406..2610414,
+ 2610499..2610501,2610730..2610732))
+ /locus_tag="SARI_02699"
+ /note="putative active site [active]"
+ /db_xref="CDD:238889"
+ misc_feature complement(order(2610310..2610312,2610373..2610378,
+ 2610448..2610450,2610583..2610588,2610595..2610597))
+ /locus_tag="SARI_02699"
+ /note="putative dimer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:238889"
+ gene complement(2610811..2611407)
+ /gene="gmhA"
+ /locus_tag="SARI_02700"
+ CDS complement(2610811..2611407)
+ /gene="gmhA"
+ /locus_tag="SARI_02700"
+ /inference="protein motif:HMMPfam:IPR001347"
+ /inference="protein motif:HMMTigr:IPR004515"
+ /inference="similar to AA sequence:SwissProt:P63222"
+ /note="catalyzes the isomerization of sedoheptulose
+ 7-phosphate to D-glycero-D-manno-heptose 7-phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphoheptose isomerase"
+ /protein_id="YP_001571698.1"
+ /db_xref="GI:161504586"
+ /db_xref="InterPro:IPR001347"
+ /db_xref="InterPro:IPR004515"
+ /translation="MLKDILMYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLA
+ DSFKAGGKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHISCVSNDFG
+ YDYIFSRYVEAVGREGDVLLGISTSGNSGNVIKAIAAAREKGMKVITLTGKDGGKMAG
+ TADIEIRVPHFGYADRIQEIHIKVIHILIQLIEKEMVK"
+ misc_feature complement(2610826..2611362)
+ /gene="gmhA"
+ /locus_tag="SARI_02700"
+ /note="Phosphoheptose isomerase is a member of the SIS
+ (Sugar ISomerase) superfamily. Phosphoheptose isomerase
+ catalyzes the isomerization of sedoheptulose 7-phosphate
+ into D-glycero-D-mannoheptose 7-phosphate. This is the
+ first step of the biosynthesis of...; Region: SIS_GmhA;
+ cd05006"
+ /db_xref="CDD:240139"
+ misc_feature complement(order(2610826..2610828,2610838..2610840,
+ 2610850..2610852,2610859..2610861,2610871..2610876,
+ 2611207..2611212,2611228..2611230,2611288..2611290,
+ 2611297..2611299,2611339..2611341,2611351..2611353))
+ /gene="gmhA"
+ /locus_tag="SARI_02700"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:240139"
+ misc_feature complement(order(2610874..2610876,2610889..2610891,
+ 2611018..2611020,2611027..2611035,2611228..2611236))
+ /gene="gmhA"
+ /locus_tag="SARI_02700"
+ /note="active site"
+ /db_xref="CDD:240139"
+ gene 2611629..2614073
+ /gene="fadE"
+ /locus_tag="SARI_02701"
+ CDS 2611629..2614073
+ /gene="fadE"
+ /locus_tag="SARI_02701"
+ /inference="protein motif:Gene3D:IPR006091"
+ /inference="protein motif:Gene3D:IPR013764"
+ /inference="protein motif:Gene3D:IPR013786"
+ /inference="protein motif:HMMPfam:IPR006090"
+ /inference="protein motif:HMMPfam:IPR006092"
+ /inference="protein motif:superfamily:IPR009075"
+ /inference="protein motif:superfamily:IPR009100"
+ /note="functions in fatty acid oxidation; converts
+ acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA"
+ /codon_start=1
+ /transl_table=11
+ /product="acyl-CoA dehydrogenase"
+ /protein_id="YP_001571699.1"
+ /db_xref="GI:161504587"
+ /db_xref="InterPro:IPR006090"
+ /db_xref="InterPro:IPR006091"
+ /db_xref="InterPro:IPR006092"
+ /db_xref="InterPro:IPR009075"
+ /db_xref="InterPro:IPR009100"
+ /db_xref="InterPro:IPR013764"
+ /db_xref="InterPro:IPR013786"
+ /translation="MMILSIFATIVLLGALFYHRVSLFLSSLILLAWTAALGVAGLWS
+ IWLLVPLAIILVPFNVTPMRKSMVSAPVFRGFRKVMPPMSRTEKEAIDAGTTWWEGDL
+ FQGKPDWKKLHNYPQPQLTAEEQAFLDGPVEEACRMANDFQITHELADLPPELWAYLK
+ AHRFFAMIIKKEYGGLEFSAYAQSRVLQKLSGVSGILAITVGVPNSLGPGELLQHYGT
+ EEQKNHYLPRLARGQEIPCFALTSPEAGSDAGAIPDTGVVCMGEWQGQQVLGMRLTWN
+ KRYITLAPIATVLGLAFKLSDPDKLLGGEEELGITCALIPTSTPGVEIGRRHFPLNVP
+ FQNGPTRGNDIFVPIDYIIGGPKMAGQGWRMLVECLSVGRGITLPSNSTGGVKSVALA
+ TGAYAHIRRQFKISIGKMEGIEEPLARIAGNAYVMDAAASLITYGIMLGEKPAVLSAI
+ VKYHCTHRGQQSIIDAMDITGGKGIMLGESNFLARAYQGAPIAITVEGANILTRSMMI
+ FGQGAIRCHPYVLEEMAAAQNNDVNAFDKLLFKHIGHVGSNTVRSFWLGLTRGLTSHT
+ PTGDATKRYYQHLNRLSANLALLSDVSMAVLGGSLKRRERISARLGDVLSQLYLASAV
+ LKRYDDEGRHEADLPLVHWGVQDALYRAEQAMDDLLQNFPNRVVAGLLTAMIFPTGRH
+ YLAPSDKLDHAVAKILQVPNATRSRIGRGQYLTPAEHNPVGLLEEALRDVIAADPIHQ
+ RICKELGKNLPFTRLDELARNALAKGLIDKDEAAILAKAEESRLRSINVDDFEPEALA
+ ARPVKLPAKERKVEAA"
+ misc_feature 2611752..2614070
+ /gene="fadE"
+ /locus_tag="SARI_02701"
+ /note="acyl-CoA dehydrogenase; Reviewed; Region: fadE;
+ PRK09463"
+ /db_xref="CDD:236528"
+ misc_feature 2612082..2613128
+ /gene="fadE"
+ /locus_tag="SARI_02701"
+ /note="Acyl-CoA dehydrogenase; Region: ACAD; cl09933"
+ /db_xref="CDD:245208"
+ misc_feature order(2612247..2612249,2612340..2612342,2612346..2612348,
+ 2612463..2612465,2612469..2612471,2613111..2613119,
+ 2613123..2613125)
+ /gene="fadE"
+ /locus_tag="SARI_02701"
+ /note="active site"
+ /db_xref="CDD:173838"
+ misc_feature 2613168..2614004
+ /gene="fadE"
+ /locus_tag="SARI_02701"
+ /note="Domain of unknown function (DUF1974); Region:
+ DUF1974; pfam09317"
+ /db_xref="CDD:220176"
+ gene 2614228..2614950
+ /locus_tag="SARI_02702"
+ CDS 2614228..2614950
+ /locus_tag="SARI_02702"
+ /inference="protein motif:Gene3D:IPR003010"
+ /inference="protein motif:HMMPfam:IPR003010"
+ /inference="protein motif:ScanRegExp:IPR001110"
+ /inference="protein motif:superfamily:IPR003010"
+ /inference="similar to AA sequence:INSD:AAV78327.1"
+ /note="'KEGG: eco:b0219 3.3e-110 yafV; predicted C-N
+ hydrolase family amidase, NAD(P)-binding;
+ COG: COG0388 Predicted amidohydrolase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571700.1"
+ /db_xref="GI:161504588"
+ /db_xref="InterPro:IPR001110"
+ /db_xref="InterPro:IPR003010"
+ /translation="MDGPANLRHFDRQLEFVSGRDVIVLPEMFTTGFAMEAANNSLSQ
+ DSVIAWMQAKARQTDALIASSAALQTERGAVNRFLLVEPEGKVHFYDKRHLFRMADEH
+ QHYTAGDERIIVQWRGWRILPLICYDLRFPVWSRNRNDYDLALYVANWPAPRSLHWQT
+ LLTARAIENQAYVAGCNRVGTDGNGFHYRGDSRVINPQGDIIATADPHQATRIDADLS
+ LAALLDYREKFPAWRDADSFTL"
+ misc_feature 2614228..2614947
+ /locus_tag="SARI_02702"
+ /note="C-N hydrolase family amidase; Provisional; Region:
+ PRK10438"
+ /db_xref="CDD:182461"
+ misc_feature 2614231..2614944
+ /locus_tag="SARI_02702"
+ /note="Xanthomonas campestris XC1258 and related proteins,
+ members of the nitrilase superfamily (putative class 13
+ nitrilases); Region: Xc-1258_like; cd07575"
+ /db_xref="CDD:143599"
+ misc_feature order(2614306..2614308,2614324..2614326,2614501..2614503,
+ 2614513..2614515,2614528..2614530,2614603..2614608,
+ 2614612..2614617,2614672..2614677)
+ /locus_tag="SARI_02702"
+ /note="putative active site [active]"
+ /db_xref="CDD:143599"
+ misc_feature order(2614306..2614308,2614501..2614503,2614603..2614605)
+ /locus_tag="SARI_02702"
+ /note="catalytic triad [active]"
+ /db_xref="CDD:143599"
+ misc_feature order(2614504..2614509,2614519..2614521,2614606..2614608,
+ 2614615..2614629,2614633..2614635,2614693..2614698,
+ 2614705..2614710,2614714..2614722,2614726..2614731,
+ 2614819..2614827,2614909..2614920,2614924..2614944)
+ /locus_tag="SARI_02702"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:143599"
+ misc_feature order(2614504..2614509,2614519..2614521,2614606..2614608,
+ 2614615..2614629,2614633..2614635,2614693..2614698,
+ 2614705..2614710,2614714..2614722,2614726..2614731,
+ 2614813..2614815,2614819..2614845,2614855..2614857,
+ 2614861..2614866,2614870..2614872,2614909..2614920,
+ 2614924..2614944)
+ /locus_tag="SARI_02702"
+ /note="multimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:143599"
+ gene 2615112..2615519
+ /locus_tag="SARI_02703"
+ CDS 2615112..2615519
+ /locus_tag="SARI_02703"
+ /inference="protein motif:HMMPfam:IPR012899"
+ /inference="similar to AA sequence:INSD:CAD21165.1"
+ /note="'COG: COG3678 P pilus assembly/Cpx signaling
+ pathway, periplasmic inhibitor/zinc-resistance associated
+ protein;
+ Psort location: extracellular, including cell wall, score:
+ 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571701.1"
+ /db_xref="GI:161504589"
+ /db_xref="InterPro:IPR012899"
+ /translation="MKNFVRTALLAATLAGASFGAFAAAVPNPPLPDQDPIVQHLKLT
+ NDQITRIKKLHQQLETDVSQISMKGIKDGALIEVIKSGKWDDAAVKQQLAAFSNIEQQ
+ ARYYRVKYYFDLSKILTPEQRQQVQQDLAQALE"
+ misc_feature 2615229..2615474
+ /locus_tag="SARI_02703"
+ /note="CpxP component of the bacterial Cpx-two-component
+ system and related proteins; Region: CpxP_like; cd09916"
+ /db_xref="CDD:197366"
+ misc_feature order(2615325..2615327,2615337..2615339,2615346..2615351,
+ 2615361..2615363,2615367..2615369,2615379..2615381,
+ 2615388..2615390,2615400..2615402,2615412..2615414,
+ 2615424..2615426,2615433..2615438,2615445..2615447,
+ 2615454..2615456)
+ /locus_tag="SARI_02703"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:197366"
+ gene complement(2615563..2615763)
+ /locus_tag="SARI_02704"
+ CDS complement(2615563..2615763)
+ /locus_tag="SARI_02704"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571702.1"
+ /db_xref="GI:161504590"
+ /translation="MGNWPVMIGKNNKNLLILFEGILMGSAIYRNIFFCLKKYFINSA
+ LLSVSCSLGRYTVRKGERRIYT"
+ gene 2615945..2616184
+ /locus_tag="SARI_02705"
+ CDS 2615945..2616184
+ /locus_tag="SARI_02705"
+ /inference="similar to AA sequence:INSD:CAD21164.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571703.1"
+ /db_xref="GI:161504591"
+ /translation="MQAGVSFQLYNVEVKPCVELDYVWQFGTETNSHTDDYRFTCQNF
+ NSVNAGPGVEVRFAVKRGAQIPISIRNLVTMLTTK"
+ gene 2616493..2617257
+ /locus_tag="SARI_02706"
+ CDS 2616493..2617257
+ /locus_tag="SARI_02706"
+ /inference="similar to AA sequence:INSD:CAD21163.1"
+ /note="'KEGG: psp:PSPPH_3466 0.0097 aldehyde dehydrogenase
+ family protein K00128;
+ COG: COG3637 Opacity protein and related surface antigens;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="adhesin/invasin PagN"
+ /protein_id="YP_001571704.1"
+ /db_xref="GI:161504592"
+ /translation="MKLVFHPNFKAGFEMKNFFAVCIASLLVTHVVTASAKEGAYITG
+ KAGASVVNLYGINSTLIDDDVVVNGQPKLPDRTKGVFGGGVAIGYDFNDQFQLPVRLE
+ LDTTFRGETDAKGGQDFTAFDDTVHMNVKNQVRMSTYMVNGYYDFHNSTAFTPYISAG
+ IGLARVKLKNNTMSEDFDINETLAASKNNFAWGAGIGAKYAVTDNIAIDASYKYINAG
+ KVSISKNNYAGDEYTSYYADTKAASNDFMIGITYAF"
+ misc_feature 2616535..2617254
+ /locus_tag="SARI_02706"
+ /note="Opacity protein and related surface antigens [Cell
+ envelope biogenesis, outer membrane]; Region: COG3637"
+ /db_xref="CDD:226163"
+ gene complement(2617493..2617657)
+ /locus_tag="SARI_02707"
+ CDS complement(2617493..2617657)
+ /locus_tag="SARI_02707"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571705.1"
+ /db_xref="GI:161504593"
+ /translation="MASWWPQGEHRYAWDKSGWLTGYEVWSKSRAERETHYNYAQRTG
+ ARRLNADGPA"
+ gene 2617664..2618065
+ /locus_tag="SARI_02708"
+ CDS 2617664..2618065
+ /locus_tag="SARI_02708"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571706.1"
+ /db_xref="GI:161504594"
+ /translation="MTARQPRFLTFWRLAERDGILHRAWRDGENIGRRFTPSSGWTPF
+ TIKSVMRVVTRVKPFTVVRLHQHLFPFRPGWLHTPGQTGKLNNPGHPIGRSAKPLPDF
+ TGRQLTIVLFHKRNFIDRPLYPVISGGSLFI"
+ gene complement(2618086..2619468)
+ /locus_tag="SARI_02709"
+ CDS complement(2618086..2619468)
+ /locus_tag="SARI_02709"
+ /inference="protein motif:HMMPfam:IPR010657"
+ /inference="similar to AA sequence:REFSEQ:ZP_01537170.1"
+ /note="'COG: COG3515 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571707.1"
+ /db_xref="GI:161504595"
+ /db_xref="InterPro:IPR010657"
+ /translation="MNDITPHKIKTGGDPRTLPDYAALRDELNKLTHPARPDVNWRYA
+ EKLCLSLFEQNGVELQTAAWYTLARTQLAGLFGLNEGLTILDALISHQWGALWPQPVH
+ ARMEILSSLSQRLQQRMRSLPLNYSDLSQLYRAEQLLTGLGEVLQRLELKHLSQLDTL
+ RTLMHNSAVRLENSDGINSTGSNIQPGVVLPATMMNDATTSTRDYAGGPDEDTPESSA
+ VKWVYVAQSEQQPNVEVLAAVPTPVKKWKSFVAGMCTMLVIGIVAVWGWQFLHRPDPL
+ QTQLAASLVPFPAPLSSEQLDMLRQQTPLPEDLIAQSQQQLAWLDKLPPDWNITYARK
+ LTEQVQSLWPEQAKPLVQQWQQQINISVLPVDTMNGWHEGMTQLRALADKLNALDGQR
+ GKYITVSELKSQVFGMLTSFRQTVPVEEQLRQLKLLPEDSLQRQQQVQQAEQRLRAQI
+ STLAQEKQRD"
+ misc_feature complement(<2618941..2619468)
+ /locus_tag="SARI_02709"
+ /note="Predicted component of the type VI protein
+ secretion system [Intracellular trafficking, secretion,
+ and vesicular transport]; Region: COG3515"
+ /db_xref="CDD:226046"
+ misc_feature complement(2619169..2619351)
+ /locus_tag="SARI_02709"
+ /note="ImpA-related N-terminal; Region: ImpA-rel_N;
+ pfam06812"
+ /db_xref="CDD:203522"
+ misc_feature complement(2618095..2618532)
+ /locus_tag="SARI_02709"
+ /note="ImpA domain protein; Region: DUF3702; pfam12486"
+ /db_xref="CDD:193049"
+ gene complement(2619515..2620759)
+ /locus_tag="SARI_02710"
+ CDS complement(2619515..2620759)
+ /locus_tag="SARI_02710"
+ /inference="similar to AA sequence:INSD:EAZ73595.1"
+ /note="'KEGG: rno:309804 1.4e-05 Cdc2l6_predicted; cell
+ division cycle 2-like 6 (CDK8-like) (predicted) K02208;
+ COG: NOG22681 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571708.1"
+ /db_xref="GI:161504596"
+ /translation="MARRKKDDNAAGIILVIIGVIAWGVYVAVRALINLNERFIESVS
+ NPAGVIGLFFGLLIATALIIRVFIYRGFTKKTAELERAVSDLAQKEKAFEETVSTEVA
+ RRIYQEKKQLSGQWDDFHNARNKASRALQRIVDSAYKFKVKTLLSGTTVNNWQSKYDQ
+ LRKEREAYAGISEKITFLELEDNADWESVKQQFLDKVALLEKAQEEKEYQAELKRQMR
+ EEKQRQDELDQQQREAEEEEQRLAEQQRLLEEALLAAEGAHREELERQRLELEQKIQD
+ VHQQYERAKSMAQLTKQGHVYVISNIGSFGENVFKIGMTRRLEPMERVKELSGAAVPF
+ DFDVHAMISCDDAPALEKTLHDYLESYRINRVNLRKEFFRVELSRIIDEVERHHGQVE
+ YIADPVALQYLQSLKYAESEAA"
+ misc_feature complement(2619605..2619850)
+ /locus_tag="SARI_02710"
+ /note="This entry represents the putative helicase A859L;
+ Region: T5orf172; smart00974"
+ /db_xref="CDD:214947"
+ gene complement(2621574..2621828)
+ /locus_tag="SARI_02711"
+ CDS complement(2621574..2621828)
+ /locus_tag="SARI_02711"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571709.1"
+ /db_xref="GI:161504597"
+ /translation="MSVKLQFLEKLQTRQSASAASVSKIQADIADFRLRMTQLQEQMD
+ AWLVGTGLNVETLNTPVTDLLVEGEHLILPPSFCVSTTGL"
+ gene complement(2621843..2622295)
+ /locus_tag="SARI_02712"
+ CDS complement(2621843..2622295)
+ /locus_tag="SARI_02712"
+ /inference="protein motif:HMMPfam:IPR010745"
+ /inference="similar to AA sequence:REFSEQ:ZP_01537169.1"
+ /note="'COG: COG3518 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571710.1"
+ /db_xref="GI:161504598"
+ /db_xref="InterPro:IPR010745"
+ /translation="MSESPRPSLYETLYGNFTGGLDLHQVSEQNQVILSVLDNMQRIL
+ NCRAGTLAHLPDYGLPDMTKILQGMPGTAHELMGTLSAVLLKYEPRLKKIMVVLLEQN
+ VPGELRYAIDAELKGIGLVRYGTEFMPEGRVLLRHLKQQQYLDTTTRL"
+ misc_feature complement(2621864..2622280)
+ /locus_tag="SARI_02712"
+ /note="Gene 25-like lysozyme; Region: GPW_gp25; cl01403"
+ /db_xref="CDD:242481"
+ gene complement(2622288..2622830)
+ /locus_tag="SARI_02713"
+ CDS complement(2622288..2622830)
+ /locus_tag="SARI_02713"
+ /inference="similar to AA sequence:REFSEQ:ZP_00824861.1"
+ /note="'COG: COG3521 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571711.1"
+ /db_xref="GI:161504599"
+ /translation="MKMAITAGKFPLAALAAGITLILAGCGLTQKVTDGTVAVTKSIF
+ YKQVKTLHLDIRAREAVNSNAGGVALSTVVRIYQLKDRKTFDTTDYLSLFKADSQAIK
+ ADLLAEKDIRLQPGGAVTVDIPMEDSAQYVAVAGMFMSPDQENNTWRVVLSSDDLDPD
+ KARVIEAGNNQLTLKALKDE"
+ misc_feature complement(2622315..2622719)
+ /locus_tag="SARI_02713"
+ /note="Type VI secretion lipoprotein; Region: T6SS-SciN;
+ pfam12790"
+ /db_xref="CDD:221773"
+ gene complement(2622805..2623908)
+ /locus_tag="SARI_02714"
+ CDS complement(2622805..2623908)
+ /locus_tag="SARI_02714"
+ /inference="protein motif:HMMPfam:IPR010732"
+ /inference="similar to AA sequence:REFSEQ:ZP_00832953.1"
+ /note="'COG: COG3520 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571712.1"
+ /db_xref="GI:161504600"
+ /db_xref="InterPro:IPR010732"
+ /translation="MHPVEREPQSAPARLIAQLGNRLPYINFYRFCQLLEQIQPDKPV
+ TGSTWQVRYEPVRFRPHPGMGFPASEIKGAEPPEHPHLPPTVRITFMGLYGVESPLPT
+ HYIDDITQRREGYEATVDFLDIFNHRLITQYYRIWRKYSYPATFEEGGKDKTSQYLLG
+ LAGLGIDGCTDSIATPASRFLALLPVMLLPGRTAEGMASLVRLLAPNTQAKIWHHDKR
+ RVPLKSPLTMSVRQPVTLTNRPVMGNYATDANSQVLMRLTTSDPTEVQGWLPGGELHG
+ DLMALLHVYLGSRLNVRLQLCVDRSLLPDATMSAKPEAGAVQLGRTAVMRPLNSANTA
+ THPKTITINLGRYERVQENIHRRETDEDGDYRW"
+ misc_feature complement(2622928..2623830)
+ /locus_tag="SARI_02714"
+ /note="Protein of unknown function (DUF1305); Region:
+ DUF1305; pfam06996"
+ /db_xref="CDD:219259"
+ gene complement(2623863..2625626)
+ /locus_tag="SARI_02715"
+ CDS complement(2623863..2625626)
+ /locus_tag="SARI_02715"
+ /inference="protein motif:HMMPfam:IPR010272"
+ /inference="similar to AA sequence:REFSEQ:ZP_00824859.1"
+ /note="'COG: COG3519 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571713.1"
+ /db_xref="GI:161504601"
+ /db_xref="InterPro:IPR010272"
+ /translation="MEDLTLRYFDAEMRYLREAAKEFAQTHPDRAAMLDLDKAGTPDP
+ YVERLLEGFAFSMGRLREKIDDDLPELTEGLVSMLWPHYLRTIPSLSVVALTPALHAM
+ KMAEVVPAGLEMYSRPVGPKNTVCRYRTTRDVMLNPLGVSDITMTTEPDGRSLLRMRF
+ ACSSQADWSGADLSRLSLYLGADAPVSSQLHLMLTKRQAALYMRLPGQPDRIQLDGYF
+ SPGGFAEEDGLWPKGDTAFSGYQLLLEYFTFRDKFMFVHLNGLEGITPPHGTEYFDIE
+ VVFSTPWPSDLPVADDAVRLHCVPVINLFTLEADPLTISGLESEYLLRPKRLQDGHTE
+ IYSVDSVTGSNRTSDAEYVPFSSFRHKGGMMRRHAPPRYYHTRIKRGVTGLYDTWLIL
+ GGHQWEEDRKFEREAVSLQITGTNGQLPRRALQSTLLDRCEQVVSTSLTVRNLCKPTL
+ PVYPPAEDRFHWRVLSHLGSGFLNMMSTAEVLRGTLALYNWQEDELNTRRLEAIQQVA
+ HHRLQRFEQGYLLRGLDIEVTLDSNGFTGEGDIHLFGEMLNRFFALYADMNQFNQLTL
+ IVQPEGKCIRWKENHSPRLPG"
+ misc_feature complement(2623866..2625626)
+ /locus_tag="SARI_02715"
+ /note="Type VI protein secretion system component VasA
+ [Intracellular trafficking, secretion, and vesicular
+ transport]; Region: COG3519"
+ /db_xref="CDD:226050"
+ misc_feature complement(2623884..2625611)
+ /locus_tag="SARI_02715"
+ /note="Bacterial protein of unknown function (DUF879);
+ Region: DUF879; pfam05947"
+ /db_xref="CDD:218821"
+ gene complement(2625648..2626178)
+ /locus_tag="SARI_02716"
+ CDS complement(2625648..2626178)
+ /locus_tag="SARI_02716"
+ /inference="protein motif:HMMPfam:IPR008523"
+ /inference="similar to AA sequence:INSD:ABM00836.1"
+ /note="'COG: COG3152 Predicted membrane protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571714.1"
+ /db_xref="GI:161504602"
+ /db_xref="InterPro:IPR008523"
+ /translation="MPENLWGCYWSAWKKSFIYQGGATRQEFWSFIIINLIVFFLIGA
+ GSYFLLVDVMADKTSAGGMVLVWAYFIYLPLRTFGPLILLFPFLALGVRRMHDTGKSG
+ WWFGGLMLLEIFILPMLAVLMYYVLRHFLDEVSSQQVVKGFTISASIMVAFALVWLCS
+ KPTKIKHPISSSDSMN"
+ misc_feature complement(<2625867..2626163)
+ /locus_tag="SARI_02716"
+ /note="Protein of unknown function (DUF805); Region:
+ DUF805; cl01224"
+ /db_xref="CDD:242375"
+ gene complement(2626241..2626972)
+ /locus_tag="SARI_02717"
+ CDS complement(2626241..2626972)
+ /locus_tag="SARI_02717"
+ /note="'Psort location: extracellular, including cell
+ wall, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571715.1"
+ /db_xref="GI:161504603"
+ /translation="MSKKYLAVLLFLSTVILSGCTSILWALNNPNDNSRHSERVEAYS
+ DEIQSAFEYKNVNLSTKSLSGATGSIELPSEGVGFIGKKNVYFVTQNGNALLSLNKLM
+ EDIPLKAIGSSKYIDISLVSDYQGYGNAGFNQFIHVKTRQPASLLTVKERTQLTDASF
+ RLKDGFYQRSVEIRGVIINKSRFGGAIPGEASLNDSYQVRFYRYTSSAGMDGGKLAFN
+ VLMTPVTLTGDILLLPLYLLMMMNG"
+ gene complement(2627003..2627488)
+ /locus_tag="SARI_02718"
+ CDS complement(2627003..2627488)
+ /locus_tag="SARI_02718"
+ /inference="similar to AA sequence:REFSEQ:ZP_01537165.1"
+ /note="'COG: COG3515 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571716.1"
+ /db_xref="GI:161504604"
+ /translation="MTLNWIQQSVLDTTGGWDNDTQSVPVTAGNDDILALEPEAVALA
+ DSEGLDAALNWLQNRPGLTTTRQRWLLRLLMGRIAEQYGKNELAIHLFAELGERAEEV
+ MLSDWEPELLFEVQARHLKLLRLKAGRSEADKVRLNPLMEQLLAGLIAVDPVRASVLC
+ A"
+ misc_feature complement(2627135..>2627485)
+ /locus_tag="SARI_02718"
+ /note="type VI secretion-associated protein, VC_A0119
+ family; Region: VI_chp_7; TIGR03362"
+ /db_xref="CDD:234184"
+ gene complement(2627615..2628598)
+ /locus_tag="SARI_02719"
+ CDS complement(2627615..2628598)
+ /locus_tag="SARI_02719"
+ /inference="protein motif:HMMPfam:IPR010657"
+ /inference="similar to AA sequence:REFSEQ:ZP_00824858.1"
+ /note="'COG: COG3515 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571717.1"
+ /db_xref="GI:161504605"
+ /db_xref="InterPro:IPR010657"
+ /translation="MSTLNTLLNACQTEQVPLLAATRERVAQWDNWLQPLSGSSPAGE
+ DPGYDDDFQQMREEVNKLSGADTELICRLAEKLLTTTAKDIRVVTYYCWAKLHREGEQ
+ GLAEGLELLAGLLERFGTQLHPQRDRSRKAALEWLAGSRMIDSLSLYPEVVRIDAMRT
+ TGALLLIAQLTEDEPDEIRPELNALYGALESRLQKAGGVDAVVPQNASTSETPSAADH
+ SDAPAIGRITSGQDLLAQARTLTEYLREQPDGWLSAHHLMKSLRHDTLRAIPAPDAQG
+ RTRIEPPRADQRALLKRLYLQQNWAEMLDAADSTFSRGANHLWLDLQWYIH"
+ misc_feature complement(<2627930..2628523)
+ /locus_tag="SARI_02719"
+ /note="Predicted component of the type VI protein
+ secretion system [Intracellular trafficking, secretion,
+ and vesicular transport]; Region: COG3515"
+ /db_xref="CDD:226046"
+ misc_feature complement(2628218..2628403)
+ /locus_tag="SARI_02719"
+ /note="ImpA-related N-terminal; Region: ImpA-rel_N;
+ pfam06812"
+ /db_xref="CDD:203522"
+ misc_feature complement(<2627618..2628001)
+ /locus_tag="SARI_02719"
+ /note="type VI secretion-associated protein, VC_A0119
+ family; Region: VI_chp_7; TIGR03362"
+ /db_xref="CDD:234184"
+ gene complement(2628598..2632005)
+ /locus_tag="SARI_02720"
+ CDS complement(2628598..2632005)
+ /locus_tag="SARI_02720"
+ /inference="protein motif:HMMPfam:IPR009612"
+ /inference="protein motif:HMMPfam:IPR010623"
+ /note="'COG: COG3523 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571718.1"
+ /db_xref="GI:161504606"
+ /db_xref="InterPro:IPR009612"
+ /db_xref="InterPro:IPR010623"
+ /translation="MAKDSSAWRGSWGGLGFTAIIAAILAWAIWSHGDAIGLNSEGLK
+ TLGIVGAMILLLLIRHGRAIGLALKQRWSRFQAERKKELPTSEGRVEQTLPRNVTVDT
+ IREAMRNLYGRRWGRKTRILLITGTAAEVEQLTPGLTTQLWQEDRGTLLLWGGDLNTP
+ PDSAWLTALRKLRRRPVDGLVWVTSAFDQLSAPGLAPPLPVPSESTMDSLSHAISARM
+ EALGWQTPLYVWSLHPRAGKPEGRVVQATGCLLPAGCLTEGLAEQLSALTPDLTSLGL
+ QQTCGEVKHNFLLTLADQLIREPQSVTTPLSVMLNPYRPLPLAGVVFSQPSAGAERAV
+ AHHWGMDKRWDVLPESVRTLAAGLRPRKPGIPWRKVFVSVAALAMVGWAVWMGIAYVT
+ NRSQIDGANVQASTAARQNQPLAQRLHALSELQKTLARLQYRSEHGVPWYERAGLSQN
+ NALLAALWPRYQDSALPLLRDASANHLQRQINAFNALPPDSPLREQMAKNTYDQLKLY
+ LMLARPEHMDAAWFSSALQHDWPKRDGVKDGVWQGVAPSLLSFYGAQLVTHPEWKLRA
+ DENMVSQARSLLVRLMGVRNSESTLYQKMLAQVAHLYADMRLEDMTGDTDASRLFSTP
+ EIVPGMFTRQAWEQAVQPAIEKVVKARRDELDWVLTDSKRQVNKQDETSPEALKKRLT
+ ERYFADFGGAWLEFLNSLHWNQAATLSDSIDQLTLMADVRQSPLVALMNTLNAQGRTG
+ QTGEAISDSLVKSAKNLLGGDNKDAIDQSVGVHGPLDAAFGPVLALVDKNRTGAQELS
+ LQSYLTRVTQVRLRLQQVTNAADPQAMTQTIAQTVFQGKAVDLTETRDYGSLIAAGLG
+ QEWSGFGRTMFVNPMEQAWQQVLTPAADSLNAQWQQAVVSEWNSAFGGRYPFSNSSSD
+ VSLPLLAKYLNADSGRIAQFLQNRLKGVLHKEGNHWVPDSINSQGLAFSPAFLNAINT
+ LSYISDVAFTEGNAGVNFELRPGTADGVMQTDIIIDSQKLTYVNQLPAWKRFTWPADT
+ EAPGANLSWISTQASTRQYADIPGSWGLIRLLDKARVKAYPGVGSSYSLSWKAQDGRT
+ LNYTLRTEAGEGPLVLLKLRNFRLPETIFSTTGVAVVSAASDAEEVY"
+ misc_feature complement(2629792..2630754)
+ /locus_tag="SARI_02720"
+ /note="Intracellular multiplication and human
+ macrophage-killing; Region: IcmF-related; pfam06761"
+ /db_xref="CDD:219164"
+ misc_feature complement(2629078..2629443)
+ /locus_tag="SARI_02720"
+ /note="Protein of unknown function (DUF1215); Region:
+ DUF1215; pfam06744"
+ /db_xref="CDD:219157"
+ gene complement(2631992..2633149)
+ /locus_tag="SARI_02721"
+ CDS complement(2631992..2633149)
+ /locus_tag="SARI_02721"
+ /inference="similar to AA sequence:REFSEQ:ZP_00824220.1"
+ /note="'COG: NOG27999 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571719.1"
+ /db_xref="GI:161504607"
+ /translation="MSWERQKATIIAEPEEPSTMLWLMACLVAIITGVLLFVLHANQF
+ LGTLQKFNLWIVAGSPLFLWLVMICLRSWLYNHAMDKHQFESDEAEYAQQQWTDWAGR
+ YLAVLYSRVILPAELTPARFIQSPADLEQSNALGRRIALPPGENVFSALLGGLDESLI
+ QLCADLPFGVTLLTDASDPEEHLQKAFSAAWIQHFGLTLSAPLLTILNTRSFSSVEER
+ IKTPTLDVELLLVHQTQGGDVYSDALAALLLTSDDVATKYRFDHHARLLRPMSIEPTE
+ DLSLAFDTFLSTQSQAIKTDVLLGDGTAWGKVFSTLLGSAKNYEGHWKPQQCHWLEEY
+ AGRSGPFSPWIMAAVASDTVALTGNCLMLSDNKKQRFMNIVTTGEQANGKG"
+ gene complement(2633449..2634303)
+ /locus_tag="SARI_02722"
+ CDS complement(2633449..2634303)
+ /locus_tag="SARI_02722"
+ /inference="protein motif:HMMPfam:IPR005532"
+ /inference="similar to AA sequence:REFSEQ:YP_452334.1"
+ /note="'KEGG: cta:CTA_0154 3.1e-22
+ serine/threonine-protein kinase PKN1 K00924;
+ COG: COG1262 Uncharacterized conserved protein;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571720.1"
+ /db_xref="GI:161504608"
+ /db_xref="InterPro:IPR005532"
+ /translation="MNKYRALITLSLIGTILVGCDNSKNDTNKQQLANDIVNSMVTVK
+ GGRFQMGDFGPLVGEKLPFSPGLDNKPLHWVELSDFKITKNKVTWREFNVWLNLNKKE
+ YNKYYKKIKGRKVEDEYDKKILRNIGDNYPASVSWDDASAFCKWIGKVSGKSITLPTE
+ AQWEYAARSRGKFFQFANSDNQYNPDDPDDKLNFTHDMAPVGSYPPNPLGLYDMMGNG
+ NEWVNDWYAEDYYKNSPEKNPQGPDKGDKKVIRGYLGSMFGLYDITRGKSEHDYEGPG
+ DGFRCVEN"
+ misc_feature complement(2633458..2634189)
+ /locus_tag="SARI_02722"
+ /note="Formylglycine-generating sulfatase enzyme; Region:
+ FGE-sulfatase; pfam03781"
+ /db_xref="CDD:217725"
+ misc_feature complement(2633452..2634186)
+ /locus_tag="SARI_02722"
+ /note="Uncharacterized conserved protein [Function
+ unknown]; Region: COG1262"
+ /db_xref="CDD:224182"
+ gene complement(2634309..2636534)
+ /locus_tag="SARI_02723"
+ CDS complement(2634309..2636534)
+ /locus_tag="SARI_02723"
+ /inference="similar to AA sequence:REFSEQ:YP_202145.1"
+ /note="'COG: NOG28037 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571721.1"
+ /db_xref="GI:161504609"
+ /translation="MGNTATVHGSGKTGMQAKGIKASHVSGTRLYFHADSETFLAVDG
+ DELEQESNALNSLLGHQVDTQMRIDDLTLQCTRLNWGQISERTALQTQIQQEAQRLDD
+ LNKQLKVKLTTLSATEELPKTTLLDNSSKSAVGLMELIEVRGGMKGARYIYVRSDQID
+ SKWRRYPLEDSDKKSGGKSFVISESYTDNEGNTRAREKIDYDKLKTQISKVKPKMLKA
+ EQDLLEQHTGVLGQWARDINDSLKHSPYQGERLGFDAQSQLMRWTYGAGLTEELNPFE
+ VDFRNQGKKVKKEAVTSGKASAYASLALAESKSKLTLSLPDMHGITMTYPLKPEMGGG
+ MGSLGVLRFDFELTLAGSVGASLGVELGVSVKSNWAKGVPGSSGDGTAPAPGQRKIDI
+ SQVVKEPEATGELTVFAGAQASANLSGAIKWCNPEKNKEYTYLAKVSLGATAQIGAGW
+ SGTFRFSYEDGKVQVLARGGMCWGGGGKGSVAFDIDGIAIITDFLPCLTYMLRNADYI
+ KLSSTVIRDGDFYAFCALPLLSTMYGVNLLVDSAWSQTDRLLDNLRDSWEIKEQRVRL
+ MQEIIDTQGECLKFSPPESKGAAIASLIEHGFWDEFASPASNAQTDCEGLVMFSARKR
+ AVLLCLRWVQSKREYENVMQHLSKNFVAVGSWQGNQQSVADFLALGEQSRVYGSKNIV
+ PNASEINILPSHYAKNLMDIWSSLPSTEEVNGTELHKLKEVSPVLMQSCTRVIVGSQE
+ L"
+ gene complement(2636579..2639092)
+ /locus_tag="SARI_02724"
+ CDS complement(2636579..2639092)
+ /locus_tag="SARI_02724"
+ /inference="protein motif:HMMPfam:IPR006533"
+ /inference="protein motif:HMMTigr:IPR006533"
+ /inference="similar to AA sequence:REFSEQ:ZP_00828333.1"
+ /note="'COG: COG3501 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571722.1"
+ /db_xref="GI:161504610"
+ /db_xref="InterPro:IPR006533"
+ /translation="MSLTDTLKNTLSALTEGGLNRYRLDIPSCTASLDVEEFNGREFM
+ SELYYYEVIFTSSDQNISSAQLLTRPATLTMGTGPLMGLTGQKVVHGVVTHFKRISGS
+ RDQATYQIIIEPFLSLLRKQFRTHRFFVNKSVPEVVTEVLQEHGLKGWEYEFTLKADY
+ PKREQINQYKENDLAFIERLLAEVGIFYFFTLQPDTQTEVVHFADKQSAWTFGKSLPL
+ SSPSGMSDNAADSVWGVNVRQNVVERSVIASDYNHREAQNILTSVPADMTRGDGDGVT
+ YGEVYHYLPRHLERGDKIAPSAETGNFWARLEHERFLSVQTTISGCSNDALLFPAQVL
+ TISERVVPPTLPSETDNGIIITRTGYIASRKDALIVMWEGMPYYENRCWRPAAKKRPV
+ VSGTLMARVTSAKENDIYAWQDASGMYRVKFDADRDDKRQGMESMPVRFAKPYGGDKY
+ GFHFPLIQGTEVAIAFHEGDPDRPYIAHAMHDSRHVDHVTELNSTRNVIRTAGLNKLR
+ MEDKRGEEHVKLSTEYGGKTQLNLGHNVDAYRDLRGEGAELRTDRHVSIRGGAGVFIT
+ ADKQPFAGDKMLSMREAISQLENALSIARSLSDAAETAEALPADIQSQVKLTESLKEL
+ ARPGMVLNAPEGVSITSPQAVRMASGSASVGIISQQNTDISALKRFTVAAGEAVSMLA
+ RKAGMKLFAAKGKVEIQAQDDALEAIAKKDVTVTSTEGRIEITAAKDIVLKNLDGSFI
+ QITGKNIILGCEGNVLWKCANAQKMGTANYTSSVPEFPGGYSEYFVAHDEKTGQLAPN
+ TRYRITTSKGDVFSGITDSDGNTAEIFTALSDKIKVELG"
+ misc_feature complement(2637518..2638996)
+ /locus_tag="SARI_02724"
+ /note="Rhs element Vgr protein; Region: vgr_GE; TIGR01646"
+ /db_xref="CDD:233505"
+ misc_feature complement(2638001..2638972)
+ /locus_tag="SARI_02724"
+ /note="Phage late control gene D protein (GPD); Region:
+ Phage_GPD; pfam05954"
+ /db_xref="CDD:218824"
+ misc_feature complement(2637638..2637868)
+ /locus_tag="SARI_02724"
+ /note="Phage-related baseplate assembly protein; Region:
+ Phage_base_V; pfam04717"
+ /db_xref="CDD:218225"
+ misc_feature complement(2637290..2637610)
+ /locus_tag="SARI_02724"
+ /note="Putative type VI secretion system Rhs element Vgr;
+ Region: T6SS_Vgr; pfam13296"
+ /db_xref="CDD:205476"
+ misc_feature complement(2636795..2637244)
+ /locus_tag="SARI_02724"
+ /note="Uncharacterized protein conserved in bacteria
+ (DUF2345); Region: DUF2345; pfam10106"
+ /db_xref="CDD:220574"
+ gene complement(2639170..2639379)
+ /locus_tag="SARI_02725"
+ CDS complement(2639170..2639379)
+ /locus_tag="SARI_02725"
+ /note="'Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571723.1"
+ /db_xref="GI:161504611"
+ /translation="MKIFIFLILVMTGVLFLPDTCFYTFVKRFIPISGDGEYGMNNFE
+ MTVLLMKTLACALGAGAVITLFRTR"
+ gene complement(2639397..2639861)
+ /locus_tag="SARI_02726"
+ CDS complement(2639397..2639861)
+ /locus_tag="SARI_02726"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571724.1"
+ /db_xref="GI:161504612"
+ /translation="MVIKRYSALFFRGLTVPFVFLLAGCPGKGDQLQLDETTQVKLVS
+ DSICFRITNPQDYQPAIISINLRGTPPKKQGFIDNPSLSIRSEQLCIPPSFYQFADNG
+ KYIVDFVLTSAGNVDEPRKFVVGVGIDHGQVYNFPLTDKEILRPYGSIEVSE"
+ gene complement(2639855..2640424)
+ /locus_tag="SARI_02727"
+ CDS complement(2639855..2640424)
+ /locus_tag="SARI_02727"
+ /inference="protein motif:ScanRegExp:IPR006025"
+ /inference="similar to AA sequence:REFSEQ:ZP_00832946.1"
+ /note="'COG: COG3501 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571725.1"
+ /db_xref="GI:161504613"
+ /db_xref="InterPro:IPR006025"
+ /translation="MTIHDASKKKKKDDKKQNDDSVRKLTTGEVALARTVFGNRIDYE
+ KVKIHHGSYLPFGLQNENVAMTPNGELYFRTTLYREDFSQTLDDLQHLFIHEMSHVWQ
+ RARGMNVIGRGLVSWLVSYHYTLDGRLLSDYPMEQQAQIIADHFTLQAHGYKAWITLR
+ RSNDVTLDGDISESAIRQHYKEALRGFPW"
+ gene complement(2640439..2643033)
+ /locus_tag="SARI_02728"
+ CDS complement(2640439..2643033)
+ /locus_tag="SARI_02728"
+ /inference="protein motif:FPrintScan:IPR001270"
+ /inference="protein motif:HMMPfam:IPR003959"
+ /inference="protein motif:HMMPfam:IPR004176"
+ /inference="protein motif:HMMPfam:IPR013093"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR001270"
+ /note="'KEGG: eci:UTI89_C3197 0. ClpB protein K01358;
+ COG: COG0542 ATPases with chaperone activity, ATP-binding
+ subunit;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571726.1"
+ /db_xref="GI:161504614"
+ /db_xref="InterPro:IPR001270"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR003959"
+ /db_xref="InterPro:IPR004176"
+ /db_xref="InterPro:IPR013093"
+ /translation="MEGAASLCQTRAHAEILPEHWLLKLLEQGEGDLTVLARRYEWDI
+ DALWQDLLGWLDSLPRSVRSRPQLSDSIQTLMQEAWLIASLNSEEQIRSHHLLMALVG
+ KQNLVRCDGLWPLLTLGQSQLGRLRPLLDVQSDERPEVQLEKELAQSHGGEVVFVGRP
+ AGAELKDGELNPALQNALDKFTLDVTAKAKEGKIDPVFGRDTEIRQMVDILSRRRKNN
+ PILVGEPGVGKTALVEGLALRIAEGNVPESLRPVVLRTLDLGLLQAGAGVKGEFEQRL
+ KNVIDAVQHSPAPILLFIDEAHTIIGAGNSAGGADAANLLKPALARGELRTIAATTWS
+ EYKQYFERDAALERRFQMVKVDEPDDDTACLMLRGLKSRYAEHHNVHITDDAVKAAVT
+ LSRRYLTGRQLPDKAVDLLDTAATRVRMSLDTVPEQLTRIRSQITSLEMEKQALLEDI
+ AVGNQIHGERLSGIEQEEVRLIVELDDLESRYGQELKLTEQLLECRQDISRQSETHAL
+ QQELNGMQDGNPLLSVDVDVRTVATVIADWTGVPLSSLMKDEQTELLILENEIGKRVV
+ GQEVALAAIAQRLRAAKTGLTSENGPQGVFLLVGPSGVGKTKTALALADVMYGGEKSL
+ ITINLSEYQEPHTVSQLKGSPPGYVGYGQGGILTEAVRKRPYSVVLLDEVEKAHRDVM
+ NLFYQVFDRGFMRDGEGREIDFRNTVILMTSNLGSDHLMQLLAEQPEATEADLHELLR
+ PILRDHFQPALLARFQTVIYRPLAETAMRTIVEMKLAQVSKRLHRHYGLTTKIDESLY
+ DALTAACLLPDTGARNVDSLLNQQILPVLSQQLLTYMVAKQKPTLLTLGWSDEEGIGL
+ EFSGAAER"
+ misc_feature complement(2640508..2643033)
+ /locus_tag="SARI_02728"
+ /note="type VI secretion ATPase, ClpV1 family; Region:
+ VI_ClpV1; TIGR03345"
+ /db_xref="CDD:234172"
+ misc_feature complement(2641960..2642442)
+ /locus_tag="SARI_02728"
+ /note="The AAA+ (ATPases Associated with a wide variety of
+ cellular Activities) superfamily represents an ancient
+ group of ATPases belonging to the ASCE (for additional
+ strand, catalytic E) division of the P-loop NTPase fold.
+ The ASCE division also includes ABC; Region: AAA; cd00009"
+ /db_xref="CDD:99707"
+ misc_feature complement(2642344..2642367)
+ /locus_tag="SARI_02728"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(order(2642038..2642040,2642149..2642151,
+ 2642341..2642364))
+ /locus_tag="SARI_02728"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(2642146..2642163)
+ /locus_tag="SARI_02728"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(2641987..2641989)
+ /locus_tag="SARI_02728"
+ /note="arginine finger; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(2640874..2641269)
+ /locus_tag="SARI_02728"
+ /note="The AAA+ (ATPases Associated with a wide variety of
+ cellular Activities) superfamily represents an ancient
+ group of ATPases belonging to the ASCE (for additional
+ strand, catalytic E) division of the P-loop NTPase fold.
+ The ASCE division also includes ABC; Region: AAA; cd00009"
+ /db_xref="CDD:99707"
+ misc_feature complement(2641213..2641236)
+ /locus_tag="SARI_02728"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(order(2640892..2640894,2641018..2641020,
+ 2641210..2641233))
+ /locus_tag="SARI_02728"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(2641015..2641032)
+ /locus_tag="SARI_02728"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(2640538..2640747)
+ /locus_tag="SARI_02728"
+ /note="C-terminal, D2-small domain, of ClpB protein;
+ Region: ClpB_D2-small; pfam10431"
+ /db_xref="CDD:204486"
+ gene complement(2643250..2643756)
+ /locus_tag="SARI_02729"
+ CDS complement(2643250..2643756)
+ /locus_tag="SARI_02729"
+ /inference="protein motif:HMMPfam:IPR008514"
+ /inference="similar to AA sequence:REFSEQ:ZP_01537154.1"
+ /note="'COG: COG3157 Hemolysin-coregulated protein
+ (uncharacterized);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571727.1"
+ /db_xref="GI:161504615"
+ /db_xref="InterPro:IPR008514"
+ /translation="MESNSMAIPVYLWLKDDGGADIKGSVDVQDREGSIEVVAQEHNL
+ YIPTDNNTGKLTGTRIHSPFLFTKEIDSSSPYLYKAVTTGQTLKSAEFKWYKINDAGQ
+ EVEYFNTKLENVKVVKVNPVMHDIKDPSFEKHNHLEKIELRYEKITWTYKDGNIIHSD
+ SWNERATA"
+ misc_feature complement(2643262..2643738)
+ /locus_tag="SARI_02729"
+ /note="type VI secretion system effector, Hcp1 family;
+ Region: VI_effect_Hcp1; TIGR03344"
+ /db_xref="CDD:213799"
+ gene complement(2643746..2645470)
+ /locus_tag="SARI_02730"
+ CDS complement(2643746..2645470)
+ /locus_tag="SARI_02730"
+ /inference="protein motif:BlastProDom:IPR006665"
+ /inference="protein motif:HMMPfam:IPR006665"
+ /inference="similar to AA sequence:REFSEQ:ZP_00832942.1"
+ /note="'COG: COG2885 Outer membrane protein and related
+ peptidoglycan-associated (lipo)proteins;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571728.1"
+ /db_xref="GI:161504616"
+ /db_xref="InterPro:IPR006665"
+ /translation="MRDVYRSLLTALAGVLALWLILGFWPLSVGSRVALSLLVILVCG
+ AMLWRQRRASQARATAVREIVDENLPPEDFQGAVILVCGDNSPLFVSGSRHRETRQGW
+ YLWVKDAEQLPLLAQHLSLVRPALASQISVMLAVVPEQHTSGDDFTQSLRSWQRAVVQ
+ CRAAFGTIPPLWTVTWVSPSAACVEAEPVWFTTVSQRTGIQVYQPCQGNVSLTEWTRE
+ TGSDGHLSRLSQGLWLDSMLAWQNSAVNDLLSVRQGELPVMKPCVQGMCMVPVSGIAG
+ NLWQQHITAVTALPPDAAVTTGPLPLPELLLPALPRRRGVSRRMVSWRYAGLLGGIFL
+ ALAMLASWMNNQRLIRNVGDHLALYHQLTGKPVAPKLRAQQRLRADGTLLDDWARRGE
+ PLCYRLGLYQGLRLVPPVEAAVSDWAPPPPPPPVIKKIIQGPKTLRLDSMSLFDSGKS
+ ALKAGSTRMLVNSLVGIKAKPGWLIVVSGHTDNTGNPKLNQTLSLKRAEAVRNWMRDT
+ GDVPESCFAVQGYGESRPIATNDTPEGRALNRRVEISLVPQANACQIPGKTPASSQDD
+ GASQHNGE"
+ misc_feature complement(2643824..>2644165)
+ /locus_tag="SARI_02730"
+ /note="Outer membrane protein and related
+ peptidoglycan-associated (lipo)proteins [Cell envelope
+ biogenesis, outer membrane]; Region: OmpA; COG2885"
+ /db_xref="CDD:225439"
+ misc_feature complement(2643833..2644141)
+ /locus_tag="SARI_02730"
+ /note="Peptidoglycan binding domains similar to the
+ C-terminal domain of outer-membrane protein OmpA; Region:
+ OmpA_C-like; cd07185"
+ /db_xref="CDD:143586"
+ misc_feature complement(order(2643851..2643853,2643863..2643865,
+ 2643992..2643994,2644001..2644006,2644016..2644018,
+ 2644025..2644030,2644127..2644132))
+ /locus_tag="SARI_02730"
+ /note="ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:143586"
+ gene complement(2645474..2646124)
+ /locus_tag="SARI_02731"
+ CDS complement(2645474..2646124)
+ /locus_tag="SARI_02731"
+ /inference="similar to AA sequence:REFSEQ:ZP_00823086.1"
+ /note="'COG: COG3455 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: vesicles of secretory system, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571729.1"
+ /db_xref="GI:161504617"
+ /translation="MNTSEMSQIERTFYPGWLMVSQLRGGQEVRDGEGLYRRACRLVQ
+ EVKATLTEAGYSDISRDHMVYALCALLDESVLNRGSTDDGYLTWRRDPLQAHFFGTLN
+ AGEELWERIRNLLKETAPDMAVLTCMYRTLQLGFVGQYRAEDDERREDVVRALGERVP
+ AFTLSQDAPIVARASRLRSGRLYWVSWIIGAAVLVVLWFFLSSSLTELVSQTVSPG"
+ misc_feature complement(2645549..2646088)
+ /locus_tag="SARI_02731"
+ /note="Uncharacterized protein conserved in bacteria
+ (DUF2077); Region: DUF2077; pfam09850"
+ /db_xref="CDD:220442"
+ gene complement(2646121..2647458)
+ /locus_tag="SARI_02732"
+ CDS complement(2646121..2647458)
+ /locus_tag="SARI_02732"
+ /inference="protein motif:HMMPfam:IPR010263"
+ /inference="similar to AA sequence:REFSEQ:ZP_00823085.1"
+ /note="'COG: COG3522 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571730.1"
+ /db_xref="GI:161504618"
+ /db_xref="InterPro:IPR010263"
+ /translation="MKIYRPLWEDGAALAPQQFQQQARWNEHVASMVARMGVSYPWGV
+ VAAEFDDAALALSRLNATRLVVRFQDGTIVDTDLADNLPPVCDLSTASGSESVDVVVA
+ LPLLSASGGNLDSGQDSERPRRWKAERVMVQELAGHESGELAILRNAITLRLSTQENT
+ AYLTCPVTRLVRNAQGQWSRDPAFIPPMLSVSASPLLTTELGDLLVRLQARRRRLMAM
+ RRESNERMADFAVADVSLFWLLNALNSTEPVLTELLQTPERHPELLYRELTRLAGSLL
+ TFSLEHDAGDIPAYQHDAPERVFPPLLALLDKLLEASLPSRVVSIHLEHQDQIWKGAL
+ YDARLREGADFYLSVRSSMPNHELQTRFPQLCKAGSFEDVSDVVNVALSGIEIKPLTH
+ VPAAIPLRLENQYFSLDLSSDVARTMLEMGSCTFYTPRSLGEVKLELFAVLRT"
+ misc_feature complement(2646130..2647446)
+ /locus_tag="SARI_02732"
+ /note="type VI secretion protein, VC_A0114 family; Region:
+ VI_chp_4; TIGR03353"
+ /db_xref="CDD:132396"
+ misc_feature complement(2646130..2647389)
+ /locus_tag="SARI_02732"
+ /note="Bacterial protein of unknown function (DUF876);
+ Region: DUF876; pfam05936"
+ /db_xref="CDD:218816"
+ gene complement(2647477..2649024)
+ /locus_tag="SARI_02733"
+ CDS complement(2647477..2649024)
+ /locus_tag="SARI_02733"
+ /inference="protein motif:HMMPfam:IPR010269"
+ /inference="similar to AA sequence:REFSEQ:ZP_01537150.1"
+ /note="'KEGG: bpm:BURPS1710b_A0534 1.0e-115 hypothetical
+ protein K00356;
+ COG: COG3517 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571731.1"
+ /db_xref="GI:161504619"
+ /db_xref="InterPro:IPR010269"
+ /translation="MLMSVKNENAAGGESVVLERPAAGGVYASLFEKINLNPVSELSA
+ LDIWQDAQAMSDATADERLTAGMQVFLECLTKAGSKVEKLDKNLIDHHIAELDYQISR
+ QLDAVMHSEEFQAVESLWRGVKSLVDKTDFRQNVKVELLDMSKEDLRQDFEDSPEIIQ
+ SGLYKHTYIDEYDTPGGEPIAALISAYEFDASAQDVALLRNISKVAAAAHMPFIGSAG
+ PAFFLKNSMEEVAAIKDIGNYFDRAEYIKWKSFRETDDARYIGLVMPRVLGRLPYGPD
+ TVPVRSFNYVEEVKGPDHDKYLWTNASFAFASNMVRSFINNGWCVQIRGPQAGGAVQD
+ LPIHLYDLGTGNQVKIPSEVMIPETREFEFANLGFIPLSYYKNRDFAAFFSANSTQKP
+ AIYDTADATANSRINARLPYIFLLSRIAHYLKLIQRENIGTTKDRRLLELELNTWVKS
+ LVTEMTDPGDELQASHPLRDAKVVVEDIEDNPGFFRVKLYAVPHFQVEGMDVNLSLVS
+ QMPKAKS"
+ misc_feature complement(2647492..2648904)
+ /locus_tag="SARI_02733"
+ /note="Predicted component of the type VI protein
+ secretion system [Intracellular trafficking, secretion,
+ and vesicular transport]; Region: COG3517; cl05484"
+ /db_xref="CDD:244108"
+ misc_feature complement(2647492..2648760)
+ /locus_tag="SARI_02733"
+ /note="Protein of unknown function (DUF877); Region:
+ DUF877; pfam05943"
+ /db_xref="CDD:218820"
+ gene complement(2649059..2649595)
+ /locus_tag="SARI_02734"
+ CDS complement(2649059..2649595)
+ /locus_tag="SARI_02734"
+ /inference="protein motif:HMMPfam:IPR008312"
+ /inference="protein motif:HMMPIR:IPR008312"
+ /inference="similar to AA sequence:REFSEQ:ZP_01537149.1"
+ /note="'COG: COG3516 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571732.1"
+ /db_xref="GI:161504620"
+ /db_xref="InterPro:IPR008312"
+ /translation="MKTIHSDKPRDDEMADSFQNEVPKARINLKLDLHTGGASKKTEL
+ PLKLLVAGDFSNGQESAPLSERKKVNLNKNNFDSVLSEYSPNVNLTVKNTLADDGSED
+ NISLTFRSMKDFSPEQVSRQIPQLKAMLSMRNLLRDLKANLLDNQAFRKELEKILLDP
+ ALSAELRTELSALAPKQP"
+ misc_feature complement(2649077..2649544)
+ /locus_tag="SARI_02734"
+ /note="Protein of unknown function (DUF770); Region:
+ DUF770; pfam05591"
+ /db_xref="CDD:218647"
+ gene complement(2650194..2650556)
+ /locus_tag="SARI_02735"
+ CDS complement(2650194..2650556)
+ /locus_tag="SARI_02735"
+ /inference="similar to AA sequence:REFSEQ:YP_257112.1"
+ /note="'COG: NOG38800 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571733.1"
+ /db_xref="GI:161504621"
+ /translation="MIILTGCVAETAQQNGQALSPLSTHAFLLRWLTVAYKRKRFPRT
+ IAYDIEGLLTLGRNKGLAASLLNRLEYLWNSCTGPVSVQSDLYQLTYAIEQLKPQGWG
+ KAVVSDGDWNNEALLVQE"
+ misc_feature complement(<2650254..2650529)
+ /locus_tag="SARI_02735"
+ /note="Protein of unknown function (DUF2913); Region:
+ DUF2913; pfam11140"
+ /db_xref="CDD:220997"
+ gene 2650632..2651483
+ /locus_tag="SARI_02736"
+ CDS 2650632..2651483
+ /locus_tag="SARI_02736"
+ /inference="similar to AA sequence:REFSEQ:ZP_00827908.1"
+ /note="'COG: NOG06321 non supervised orthologous group;
+ Psort location: cytoskeletal, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571734.1"
+ /db_xref="GI:161504622"
+ /translation="MSELTITKPEVLTDHTDVICSTSIERIITGRNSALKQIETLIQH
+ VADISTLTSSIGGKTALDWAMKQDFRCGCWLMEKREAAMKAITRNRDRDIWRDLMKRS
+ GMLSIMDAQTRDQWYNSLEKDDIPAISEENILSTFKLLHLNKGEVFERGVINVFKGLS
+ WDYKSNSPCKFGKKIIVSGLVKYDRWGFGLNWNWGWQRDRLADLERMLMLLDGKPVPD
+ NRADVTRRLSDHIHENRHSNRYEDEMFAIKYFQKGTAHITFKRPDLVDKMNDIIAKHY
+ PGMLAAL"
+ misc_feature 2650884..2651471
+ /locus_tag="SARI_02736"
+ /note="Methyltransferase domain; Region: Methyltransf_27;
+ pfam13708"
+ /db_xref="CDD:222332"
+ unsure 2651564..2651572
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(2651626..2651699)
+ /locus_tag="SARI_02737"
+ tRNA complement(2651626..2651699)
+ /locus_tag="SARI_02737"
+ /product="tRNA-Asp"
+ gene complement(2651835..2652575)
+ /locus_tag="SARI_02738"
+ CDS complement(2651835..2652575)
+ /locus_tag="SARI_02738"
+ /inference="protein motif:HMMPfam:IPR013520"
+ /inference="protein motif:HMMSmart:IPR006055"
+ /inference="protein motif:HMMTigr:IPR006054"
+ /inference="protein motif:HMMTigr:IPR006309"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:REFSEQ:YP_215247.1"
+ /note="3'-5' exonuclease of DNA polymerase III"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA polymerase III subunit epsilon"
+ /protein_id="YP_001571735.1"
+ /db_xref="GI:161504623"
+ /db_xref="InterPro:IPR006054"
+ /db_xref="InterPro:IPR006055"
+ /db_xref="InterPro:IPR006309"
+ /db_xref="InterPro:IPR012337"
+ /db_xref="InterPro:IPR013520"
+ /translation="MTDMSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVINR
+ RLTGNNFHVYLKPDRLVDPEAFGVHGIADEFLLDKPVFADVVDEFLDYIRGAELVIHN
+ ASFDIGFMDYEFGLLKRDIPKTNTFCKVTDSLAVARKMFPGKRNSLDALCSRYEIDNS
+ KRTLHGALLDAQILAEVYLAMTGGQTSMTFAIEGETQRQQGEATIQRIVRQASRLRVV
+ FATDEELAAHESRLDLVQKKGGSCLWRA"
+ misc_feature complement(2651859..2652548)
+ /locus_tag="SARI_02738"
+ /note="DNA polymerase III, epsilon subunit,
+ Proteobacterial; Region: dnaQ_proteo; TIGR01406"
+ /db_xref="CDD:130473"
+ misc_feature complement(2652030..2652545)
+ /locus_tag="SARI_02738"
+ /note="DEDDh 3'-5' exonuclease domain of the
+ epsilon subunit of Escherichia coli DNA polymerase III and
+ similar proteins; Region: DNA_pol_III_epsilon_Ecoli_like;
+ cd06131"
+ /db_xref="CDD:99835"
+ misc_feature complement(order(2652066..2652068,2652081..2652083,
+ 2652090..2652092,2652132..2652137,2652258..2652266,
+ 2652270..2652275,2652369..2652374,2652381..2652386,
+ 2652513..2652518,2652522..2652533))
+ /locus_tag="SARI_02738"
+ /note="active site"
+ /db_xref="CDD:99835"
+ misc_feature complement(order(2652066..2652068,2652081..2652083,
+ 2652258..2652260,2652525..2652527,2652531..2652533))
+ /locus_tag="SARI_02738"
+ /note="catalytic site [active]"
+ /db_xref="CDD:99835"
+ misc_feature complement(order(2652066..2652068,2652081..2652083,
+ 2652090..2652092,2652132..2652137,2652261..2652266,
+ 2652270..2652275,2652369..2652374,2652381..2652386,
+ 2652513..2652518,2652522..2652533))
+ /locus_tag="SARI_02738"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:99835"
+ gene 2652630..2653097
+ /gene="rnhA"
+ /locus_tag="SARI_02739"
+ CDS 2652630..2653097
+ /gene="rnhA"
+ /locus_tag="SARI_02739"
+ /inference="protein motif:HMMPfam:IPR002156"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:INSD:AAL19220.1"
+ /note="An endonuclease that specifically degrades the RNA
+ strand of RNA-DNA hybrids"
+ /codon_start=1
+ /transl_table=11
+ /product="ribonuclease H"
+ /protein_id="YP_001571736.1"
+ /db_xref="GI:161504624"
+ /db_xref="InterPro:IPR002156"
+ /db_xref="InterPro:IPR012337"
+ /translation="MLKQVEIFTDGSCLGNPGPGGYGAILRYRGHEKTFSEGYTLTTN
+ NRMELMAAIVALEALKEHCEVTLSTDSQYVRQGITQWIHNWKKRGWKTAEKKPVKNVD
+ LWKRLDAALGQHQIKWVWVKGHAGHPENERCDELARAAAMNPTQEDSGYQAEA"
+ misc_feature 2652639..2653052
+ /gene="rnhA"
+ /locus_tag="SARI_02739"
+ /note="RNase HI family found mainly in prokaryotes;
+ Region: RNase_HI_prokaryote_like; cd09278"
+ /db_xref="CDD:187702"
+ misc_feature order(2652657..2652668,2652756..2652764,2652771..2652773,
+ 2652837..2652839,2652987..2652989,2653041..2653043)
+ /gene="rnhA"
+ /locus_tag="SARI_02739"
+ /note="RNA/DNA hybrid binding site [nucleotide binding];
+ other site"
+ /db_xref="CDD:187702"
+ misc_feature order(2652657..2652659,2652771..2652773,2652837..2652839,
+ 2653029..2653031)
+ /gene="rnhA"
+ /locus_tag="SARI_02739"
+ /note="active site"
+ /db_xref="CDD:187702"
+ gene complement(2653094..2653816)
+ /locus_tag="SARI_02740"
+ CDS complement(2653094..2653816)
+ /locus_tag="SARI_02740"
+ /inference="protein motif:HMMPfam:IPR013216"
+ /inference="similar to AA sequence:REFSEQ:YP_151693.1"
+ /note="'KEGG: vfi:VF1937 1.6e-46 methyltransferase
+ K00599;
+ COG: COG0500 SAM-dependent methyltransferases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571737.1"
+ /db_xref="GI:161504625"
+ /db_xref="InterPro:IPR013216"
+ /translation="MKPARLSQTVVAPGGWGDLPWGNYYREALEQRLNPWLAKMYGFH
+ LLKIGNLSAEINSEACAVSHQVNVSSQGSPMQVLADPLHLPFADKSVDVCLLAHTLPW
+ CTDPHRLLREADRVLIDDGWLVMSGFNPVSLMGLRKLVPVLRKTPPYNSRMFTLMRQL
+ DWLSLLNFEVLHYSRFHVLPWKKQGGRLLNTHIPALGCLQLIVARKRTIPLTLNPLRL
+ NKSKAPIRQTVGATRQYRKPYG"
+ misc_feature complement(2653439..>2653657)
+ /locus_tag="SARI_02740"
+ /note="S-adenosylmethionine-dependent methyltransferases
+ (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
+ that use S-adenosyl-L-methionine (SAM or AdoMet) as a
+ substrate for methyltransfer, creating the product
+ S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
+ cd02440"
+ /db_xref="CDD:100107"
+ unsure 2653425..2653443
+ /note="Sequence derived from one plasmid subclone"
+ gene 2653851..2654606
+ /locus_tag="SARI_02741"
+ CDS 2653851..2654606
+ /locus_tag="SARI_02741"
+ /inference="protein motif:HMMPfam:IPR001279"
+ /inference="similar to AA sequence:REFSEQ:YP_215244.1"
+ /note="catalyzes the hydrolysis of S-D-lactoylglutathione
+ to D-lactic acid and reduced glutathione; plays an
+ important role in cellular detoxification using
+ glutathione"
+ /codon_start=1
+ /transl_table=11
+ /product="hydroxyacylglutathione hydrolase"
+ /protein_id="YP_001571738.1"
+ /db_xref="GI:161504626"
+ /db_xref="InterPro:IPR001279"
+ /translation="MNLNSIPAFQDNYIWVLNNDEGRCVIVDPGEAAPVLKAIDDHKW
+ IPEAIFLTHHHHDHVGGVKELLQHFPQMTVYGPTETQDKGATHLVGDGDTVLVLGYNF
+ SIFATPGHTLGHICYFSHPYLFCGDTLFSGGCGRLFEGTALQMYQSLMKINTLPDDTL
+ ICSAHEYTLANLKFALSILPHDSFINEYYRKVNELRVKKQMTLPVILKNERKINLFLR
+ TEDIDLINEINKETILQQPEARFAWLRSKKDTF"
+ misc_feature 2653851..2654603
+ /locus_tag="SARI_02741"
+ /note="hydroxyacylglutathione hydrolase; Provisional;
+ Region: PRK10241"
+ /db_xref="CDD:182327"
+ gene 2654678..2656045
+ /gene="mltD"
+ /locus_tag="SARI_02742"
+ CDS 2654678..2656045
+ /gene="mltD"
+ /locus_tag="SARI_02742"
+ /inference="protein motif:HMMPfam:IPR002482"
+ /inference="protein motif:HMMPfam:IPR008258"
+ /inference="protein motif:HMMPfam:IPR010511"
+ /inference="protein motif:HMMSmart:IPR002482"
+ /inference="protein motif:ScanRegExp:IPR000189"
+ /inference="similar to AA sequence:INSD:AAV78383.1"
+ /note="'catalyzes the cleavage of the beta-1,4-glycosidic
+ bond between N-acetylmuramic acid and N-acetylglucosamine
+ residues; may play a role in recycling muropeptides during
+ cell division and/or cell elongation; in Helicobacter
+ pylori MltD is a endolytic transglycosylase involved
+ mainly in the rearrangement of the peptidoglycan layer of
+ the bacterial cell wall'"
+ /codon_start=1
+ /transl_table=11
+ /product="membrane-bound lytic murein transglycosylase D"
+ /protein_id="YP_001571739.1"
+ /db_xref="GI:161504627"
+ /db_xref="InterPro:IPR000189"
+ /db_xref="InterPro:IPR002482"
+ /db_xref="InterPro:IPR008258"
+ /db_xref="InterPro:IPR010511"
+ /translation="MKAKAILLASVLLVGCQTSQNTGNVQQHAQSLSAAGQGEAGKFT
+ SQARWMDDGTSIAPDQDLWAFIGDELKLGIPENSRIREQKQKYLRNKSYLHDVTLRAE
+ PYMYWIAGQVKKRNMPMELVLLPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQT
+ RNYDARRDVVASTTAALDMMQRLNKMFNGDWLLTVAAYNSGEGRVMRAIKANKARGKP
+ TDFWSLSLPRETKVYVPKMLALSEILKNSKRYGVRLPTTDESRALARVRLNSPVEMAQ
+ IADMAGMSISKLKTFNAGVKGSTLGVSGPRYVMVPKKHAEQLRESLASGEIDAVQSRL
+ IADNTPLNSRSYKVRSGDTLSGIASRLGVSTKDLQQWNNLHGSRLKIGQSLTVGAGSS
+ AQRLANNSDSITYRVRKGDSLSSIARRHGVNIKDVMRWNHDTDNLQPGDQLTLFVKDN
+ STPDS"
+ misc_feature 2654678..2656042
+ /gene="mltD"
+ /locus_tag="SARI_02742"
+ /note="membrane-bound lytic murein transglycosylase D;
+ Provisional; Region: mltD; PRK10783"
+ /db_xref="CDD:182727"
+ misc_feature 2655029..2655403
+ /gene="mltD"
+ /locus_tag="SARI_02742"
+ /note="Lytic Transglycosylase (LT) and Goose Egg White
+ Lysozyme (GEWL) domain. Members include the soluble and
+ insoluble membrane-bound LTs in bacteria, the LTs in
+ bacteriophage lambda, as well as, the eukaryotic
+ "goose-type" lysozymes (GEWL). LTs...; Region:
+ LT_GEWL; cd00254"
+ /db_xref="CDD:238157"
+ misc_feature order(2655059..2655061,2655119..2655121,2655212..2655214,
+ 2655269..2655271)
+ /gene="mltD"
+ /locus_tag="SARI_02742"
+ /note="N-acetyl-D-glucosamine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:238157"
+ misc_feature 2655059..2655061
+ /gene="mltD"
+ /locus_tag="SARI_02742"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:238157"
+ misc_feature 2655707..2655838
+ /gene="mltD"
+ /locus_tag="SARI_02742"
+ /note="Lysine Motif is a small domain involved in binding
+ peptidoglycan; Region: LysM; cd00118"
+ /db_xref="CDD:212030"
+ misc_feature 2655884..2656012
+ /gene="mltD"
+ /locus_tag="SARI_02742"
+ /note="Lysine Motif is a small domain involved in binding
+ peptidoglycan; Region: LysM; cd00118"
+ /db_xref="CDD:212030"
+ unsure 2654717..2654790
+ /gene="mltD"
+ /locus_tag="SARI_02742"
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(2656116..2656657)
+ /locus_tag="SARI_02743"
+ /note="Pseudogene compared to gi|16763642|ref|NP_459257.1|
+ putative methyltransferase [Salmonella typhimurium LT2]"
+ gene complement(2656846..2657625)
+ /locus_tag="SARI_02744"
+ CDS complement(2656846..2657625)
+ /locus_tag="SARI_02744"
+ /inference="protein motif:HMMPfam:IPR005135"
+ /inference="similar to AA sequence:REFSEQ:YP_151697.1"
+ /note="'COG: COG3021 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571740.1"
+ /db_xref="GI:161504628"
+ /db_xref="InterPro:IPR005135"
+ /translation="MRYVAGQPAERILPPGSFASIGQALPAGEPISSEDRIRILVWNI
+ FKQQRAEWLSVLKNYGKDAHLVLLQEAQATPELVQFATANYLAADQVPAFVLPQHPSG
+ VMTLSAAHPVYCCPLREREPILRLAKSALVTVYPLPDTRLLMVVNIHAVNFSLGVDVY
+ SKQLLPIGDQIAHHSGPVIMAGDFNAWSRPRMNALYRFAREMSLRQVRFTDDQRRRAF
+ GRPLDFVFYRGLNVSEASVLVTRASDHNPLLVEFSPGKPEQ"
+ misc_feature complement(2656858..2657625)
+ /locus_tag="SARI_02744"
+ /note="hypothetical protein; Provisional; Region:
+ PRK05421"
+ /db_xref="CDD:235454"
+ misc_feature complement(order(2657071..2657073,2657077..2657079,
+ 2657179..2657181,2657416..2657418,2657497..2657499))
+ /locus_tag="SARI_02744"
+ /note="putative catalytic site [active]"
+ /db_xref="CDD:197306"
+ misc_feature complement(2657416..2657418)
+ /locus_tag="SARI_02744"
+ /note="putative metal binding site [ion binding]; other
+ site"
+ /db_xref="CDD:197306"
+ misc_feature complement(order(2657071..2657073,2657179..2657181))
+ /locus_tag="SARI_02744"
+ /note="putative phosphate binding site [ion binding];
+ other site"
+ /db_xref="CDD:197306"
+ misc_feature complement(order(2656891..2656896,2656957..2656959,
+ 2657071..2657073,2657077..2657079))
+ /locus_tag="SARI_02744"
+ /note="putative catalytic site [active]"
+ /db_xref="CDD:197306"
+ misc_feature complement(order(2656891..2656893,2657071..2657073))
+ /locus_tag="SARI_02744"
+ /note="putative phosphate binding site [ion binding];
+ other site"
+ /db_xref="CDD:197306"
+ misc_feature complement(2656894..2656896)
+ /locus_tag="SARI_02744"
+ /note="putative metal binding site [ion binding]; other
+ site"
+ /db_xref="CDD:197306"
+ gene 2657887..2658801
+ /locus_tag="SARI_02745"
+ CDS 2657887..2658801
+ /locus_tag="SARI_02745"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="protein motif:HMMPfam:IPR005119"
+ /inference="similar to AA sequence:REFSEQ:NP_454859.1"
+ /note="'KEGG: shn:Shewana3_3435 4.4e-09 transcriptional
+ regulator, LysR family K06022;
+ COG: COG0583 Transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571741.1"
+ /db_xref="GI:161504629"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR005119"
+ /db_xref="InterPro:IPR011991"
+ /translation="MKATSEELAIFVAVIEGGSFSRAAERLGQANSAISRSVKKLEMK
+ LGVNLINRTTRQLSLTEEGERYFRRVQIILQDMAAAETEILETRNTPRGLLRIDAATP
+ VILHFLMPLIKPFRERYPEVKLSLVSSETFINLIERKVDVAIRAGTLTDSSLRARPLF
+ TSYRKIIASPDYIDLYGAPKSVEELKQHVCLGFTEPLLLNTWPVACCDGQLYEIHSGL
+ SSNSGETLKQLCLSGNGIACLSDYMIDKEIAQGTLVELMTDKRLPVEMPFSAVYYSDR
+ AVSPRIRAFVDFLSEHVKTASKNTTKGS"
+ misc_feature 2657902..2658768
+ /locus_tag="SARI_02745"
+ /note="Transcriptional regulator [Transcription]; Region:
+ LysR; COG0583"
+ /db_xref="CDD:223656"
+ misc_feature 2657908..2658078
+ /locus_tag="SARI_02745"
+ /note="Bacterial regulatory helix-turn-helix protein, lysR
+ family; Region: HTH_1; pfam00126"
+ /db_xref="CDD:215735"
+ misc_feature 2658157..2658753
+ /locus_tag="SARI_02745"
+ /note="The C-terminal substrate binding domain of
+ LysR-type transcriptional regulator CrgA, contains the
+ type 2 periplasmic binding domain; Region: PBP2_CrgA;
+ cd08478"
+ /db_xref="CDD:176167"
+ misc_feature order(2658193..2658195,2658205..2658207,2658322..2658324,
+ 2658364..2658366,2658370..2658372,2658553..2658555,
+ 2658604..2658606,2658688..2658690)
+ /locus_tag="SARI_02745"
+ /note="putative effector binding pocket; other site"
+ /db_xref="CDD:176167"
+ misc_feature order(2658196..2658201,2658211..2658216,2658220..2658225,
+ 2658232..2658234,2658244..2658246,2658250..2658270,
+ 2658451..2658453,2658535..2658549,2658568..2658573,
+ 2658580..2658582)
+ /locus_tag="SARI_02745"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:176167"
+ gene complement(2658890..2658963)
+ /locus_tag="SARI_02746"
+ tRNA complement(2658890..2658963)
+ /locus_tag="SARI_02746"
+ /product="tRNA-Asp"
+ gene complement(2659017..2659132)
+ /locus_tag="SARI_02747"
+ rRNA complement(2659017..2659132)
+ /locus_tag="SARI_02747"
+ /product="5S ribosomal RNA"
+ /inference="nucleotide motif:Rfam:RF00001"
+ /note="Rfam score 84.4"
+ gene complement(2659160..2659315)
+ /locus_tag="SARI_02748"
+ CDS complement(2659160..2659315)
+ /locus_tag="SARI_02748"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571742.1"
+ /db_xref="GI:161504630"
+ /translation="MFWRIERIFSIDNRFSGTKDFTLRQGGKRRKGRSILKYVTDFTS
+ AANAASV"
+ gene complement(2659319..2662319)
+ /locus_tag="SARI_04702"
+ rRNA complement(2659319..2662319)
+ /locus_tag="SARI_04702"
+ /product="23S ribosomal RNA"
+ gene complement(2662494..2662566)
+ /locus_tag="SARI_02750"
+ tRNA complement(2662494..2662566)
+ /locus_tag="SARI_02750"
+ /product="tRNA-Ala"
+ gene complement(2662679..2662752)
+ /locus_tag="SARI_02751"
+ tRNA complement(2662679..2662752)
+ /locus_tag="SARI_02751"
+ /product="tRNA-Ile"
+ gene complement(2662818..2664368)
+ /locus_tag="SARI_02752"
+ rRNA complement(2662818..2664368)
+ /locus_tag="SARI_02752"
+ /product="16S ribosomal RNA"
+ /inference="nucleotide motif:Rfam:RF00177"
+ /note="Rfam score 352.77;
+ 5 domain"
+ unsure 2664105..2664430
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(2664730..2665296)
+ /locus_tag="SARI_02753"
+ CDS complement(2664730..2665296)
+ /locus_tag="SARI_02753"
+ /inference="protein motif:HMMPfam:IPR005834"
+ /inference="protein motif:HMMTigr:IPR004446"
+ /inference="protein motif:HMMTigr:IPR006543"
+ /inference="protein motif:HMMTigr:IPR006549"
+ /inference="similar to AA sequence:INSD:CAD08708.1"
+ /note="'Converts the D-glycero-beta-D-manno-heptose
+ 1,7-bisphosphate intermediate into
+ D-glycero-beta-D-manno-heptose 1-phosphate'"
+ /codon_start=1
+ /transl_table=11
+ /product="D,D-heptose 1,7-bisphosphate phosphatase"
+ /protein_id="YP_001571744.1"
+ /db_xref="GI:161504632"
+ /db_xref="InterPro:IPR004446"
+ /db_xref="InterPro:IPR005834"
+ /db_xref="InterPro:IPR006543"
+ /db_xref="InterPro:IPR006549"
+ /translation="MAKSVPAIFLDRDGTINVDHGYVHEIDSFEFIDGVIDAMRELKK
+ MGYALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGCIEE
+ LRQACDCRKPHPGMLLAARDFLHIDMAASYMVGDKLEDMQAAAEANVGTKVLVRTGKP
+ VTAAAENAADWVLNSLADLPSAIKKQQK"
+ misc_feature complement(2664757..2665284)
+ /locus_tag="SARI_02753"
+ /note="D,D-heptose 1,7-bisphosphate phosphatase; Region:
+ GmhB_yaeD; TIGR00213"
+ /db_xref="CDD:129317"
+ misc_feature complement(2664832..2665278)
+ /locus_tag="SARI_02753"
+ /note="Haloacid dehalogenase-like hydrolases. The haloacid
+ dehalogenase-like (HAD) superfamily includes L-2-haloacid
+ dehalogenase, epoxide hydrolase, phosphoserine
+ phosphatase, phosphomannomutase, phosphoglycolate
+ phosphatase, P-type ATPase, and many others; Region:
+ HAD_like; cd01427"
+ /db_xref="CDD:119389"
+ misc_feature complement(order(2665135..2665140,2665258..2665266))
+ /locus_tag="SARI_02753"
+ /note="active site"
+ /db_xref="CDD:119389"
+ misc_feature complement(2665249..2665266)
+ /locus_tag="SARI_02753"
+ /note="motif I; other site"
+ /db_xref="CDD:119389"
+ misc_feature complement(2665138..2665140)
+ /locus_tag="SARI_02753"
+ /note="motif II; other site"
+ /db_xref="CDD:119389"
+ gene 2665486..2666517
+ /gene="metN"
+ /locus_tag="SARI_02754"
+ CDS 2665486..2666517
+ /gene="metN"
+ /locus_tag="SARI_02754"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR012692"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:INSD:AAL19210.1"
+ /note="part of the metNIQ transport system for methionine"
+ /codon_start=1
+ /transl_table=11
+ /product="DL-methionine transporter ATP-binding subunit"
+ /protein_id="YP_001571745.1"
+ /db_xref="GI:161504633"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR012692"
+ /translation="MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGK
+ STLIRCVNLLERPTAGSVMVGGQELTTLSEAELTKARRQIGMIFQHFNLLASRTVFGN
+ VALPLELDSTPKEEIRRRVTELLELVGLGDKHDSYPANLSGGQKQRVAIARALASNPK
+ VLLCDEATSALDPATTRAILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGE
+ LIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQARLKASPETDSVPMLRMEFTGQ
+ SVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQEETQAAIAWLQDHH
+ VKVEVLGYV"
+ misc_feature 2665486..2666514
+ /gene="metN"
+ /locus_tag="SARI_02754"
+ /note="DL-methionine transporter ATP-binding subunit;
+ Provisional; Region: metN; PRK11153"
+ /db_xref="CDD:236863"
+ misc_feature 2665486..2666184
+ /gene="metN"
+ /locus_tag="SARI_02754"
+ /note="ATP-binding cassette domain of methionine
+ transporter; Region: ABC_MetN_methionine_transporter;
+ cd03258"
+ /db_xref="CDD:213225"
+ misc_feature 2665597..2665620
+ /gene="metN"
+ /locus_tag="SARI_02754"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213225"
+ misc_feature order(2665606..2665611,2665615..2665623,2665750..2665752,
+ 2665978..2665983,2666080..2666082)
+ /gene="metN"
+ /locus_tag="SARI_02754"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213225"
+ misc_feature 2665741..2665752
+ /gene="metN"
+ /locus_tag="SARI_02754"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213225"
+ misc_feature 2665906..2665935
+ /gene="metN"
+ /locus_tag="SARI_02754"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213225"
+ misc_feature 2665966..2665983
+ /gene="metN"
+ /locus_tag="SARI_02754"
+ /note="Walker B; other site"
+ /db_xref="CDD:213225"
+ misc_feature 2665990..2666001
+ /gene="metN"
+ /locus_tag="SARI_02754"
+ /note="D-loop; other site"
+ /db_xref="CDD:213225"
+ misc_feature 2666068..2666088
+ /gene="metN"
+ /locus_tag="SARI_02754"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213225"
+ misc_feature 2666284..2666505
+ /gene="metN"
+ /locus_tag="SARI_02754"
+ /note="This domain is found at the C-terminus of ABC
+ transporter proteins involved in D-methionine transport as
+ well as a number of ferredoxin-like proteins; Region: NIL;
+ smart00930"
+ /db_xref="CDD:197998"
+ gene 2666510..2667163
+ /locus_tag="SARI_02755"
+ CDS 2666510..2667163
+ /locus_tag="SARI_02755"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="similar to AA sequence:INSD:AAX64151.1"
+ /note="part of the MetNIQ methionine uptake system"
+ /codon_start=1
+ /transl_table=11
+ /product="DL-methionine transporter permease subunit"
+ /protein_id="YP_001571746.1"
+ /db_xref="GI:161504634"
+ /db_xref="InterPro:IPR000515"
+ /translation="MSEAMMWLLIRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPG
+ QIMENARLYRALSAVVNIFRSIPFIILLVWMIPFTRVIVGTSIGLQAAIVPLTVGAAP
+ FIARMVENALLEIPAGLIEASRAMGATPLQIVRKILLPEALPGLVNAATITLITLVGY
+ SAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVLVLLVVLVYLIQLSGDRIVRAVTHK"
+ misc_feature 2666549..>2666980
+ /locus_tag="SARI_02755"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature order(2666594..2666599,2666606..2666611,2666624..2666626,
+ 2666675..2666686,2666690..2666719,2666726..2666731,
+ 2666735..2666737,2666801..2666806,2666810..2666812,
+ 2666816..2666818,2666825..2666830,2666834..2666836,
+ 2666846..2666851,2666858..2666860,2666909..2666911,
+ 2666951..2666956,2666963..2666965)
+ /locus_tag="SARI_02755"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature 2666693..2666737
+ /locus_tag="SARI_02755"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(2666861..2666899,2666915..2666920,2666930..2666932)
+ /locus_tag="SARI_02755"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene 2667202..2668017
+ /gene="metQ"
+ /locus_tag="SARI_02756"
+ CDS 2667202..2668017
+ /gene="metQ"
+ /locus_tag="SARI_02756"
+ /inference="protein motif:HMMPfam:IPR004872"
+ /inference="protein motif:HMMTigr:IPR004478"
+ /inference="similar to AA sequence:REFSEQ:NP_459249.1"
+ /note="'COG: COG1464 ABC-type metal ion transport system,
+ periplasmic component/surface antigen;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="DL-methionine transporter substrate-binding
+ subunit"
+ /protein_id="YP_001571747.1"
+ /db_xref="GI:161504635"
+ /db_xref="InterPro:IPR004478"
+ /db_xref="InterPro:IPR004872"
+ /translation="MAFKFKTFAAVGALIGSLALAGCGQDEKDPNHIKVGVIVGAEQQ
+ VAEVAQKVAKEKYGLDVELVAFNDYVLPNEALSKGDIDANAFQHKPYLDQQIKDRGYK
+ LVSVGKTFVYPIAGYSKKIKSLDELQDGSQVAVPNDPTNLGRSLLLLQKVGLIKLKDG
+ VGLLPTSLDIADNPKNLKIVELEAPQLPRSLDDAQIALAVINTTYASQIGLTPAKDGI
+ FVEDKDSPYVNLIVTREDNKDAENVKKFVQAYQSDEVYEAANKVFNGGAVKGW"
+ misc_feature 2667202..2668014
+ /gene="metQ"
+ /locus_tag="SARI_02756"
+ /note="DL-methionine transporter substrate-binding
+ subunit; Provisional; Region: metQ; PRK11063"
+ /db_xref="CDD:182939"
+ misc_feature 2667241..2668014
+ /gene="metQ"
+ /locus_tag="SARI_02756"
+ /note="lipoprotein, YaeC family; Region: TIGR00363"
+ /db_xref="CDD:129460"
+ gene 2668187..2668540
+ /gene="rcsF"
+ /locus_tag="SARI_02757"
+ CDS 2668187..2668540
+ /gene="rcsF"
+ /locus_tag="SARI_02757"
+ /inference="similar to AA sequence:REFSEQ:YP_149592.1"
+ /note="'COG: NOG09836 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="outer membrane lipoprotein"
+ /protein_id="YP_001571748.1"
+ /db_xref="GI:161504636"
+ /translation="MLSRSPVEPVQSTATPPKAEPDKPKAPRVAPVRIYTNAEDLVGK
+ PFRDLGEVSGESCQATNQDSPPNIPTARKRMQINASKMKANAVLLHSCEITSGTPGCY
+ RQAVCIGSALNISAK"
+ misc_feature 2668187..2668534
+ /gene="rcsF"
+ /locus_tag="SARI_02757"
+ /note="outer membrane lipoprotein; Reviewed; Region: rcsF;
+ PRK10781"
+ /db_xref="CDD:182725"
+ gene 2668537..2669244
+ /locus_tag="SARI_02758"
+ CDS 2668537..2669244
+ /locus_tag="SARI_02758"
+ /inference="protein motif:BlastProDom:IPR001378"
+ /inference="protein motif:HMMPfam:IPR001378"
+ /inference="protein motif:HMMTigr:IPR001378"
+ /inference="protein motif:ScanRegExp:IPR001378"
+ /inference="protein motif:superfamily:IPR000652"
+ /inference="similar to AA sequence:INSD:AAL19206.1"
+ /note="'KEGG: eci:UTI89_C0211 6.6e-112 yaeB; hypothetical
+ protein YaeB;
+ COG: COG1720 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571749.1"
+ /db_xref="GI:161504637"
+ /db_xref="InterPro:IPR000652"
+ /db_xref="InterPro:IPR001378"
+ /translation="MSSFQFEQIGVIRSPYKEKFAVPRQPGLVKSACGELHLIAPYNQ
+ ADAVRGLEAFSHLWVLFVFHQTMEGGWRPTVRPPRLGGNARMGVFATRSTFRPNPIGM
+ SLVALKGIECRKESVVLKLDSLDLVDGTPVVDIKPYLPFAEALPDAVASYAQQAPMAE
+ MAVSFTAEVAQQLTTLEKRYPQLRTFICDVLAQDPRPAYRKGEKTGKTYAVWLHDFNV
+ RWRVVDAGFEVFALEPR"
+ misc_feature 2668561..2668950
+ /locus_tag="SARI_02758"
+ /note="Escherichia coli YaeB and related proteins; Region:
+ UPF0066; cd09281"
+ /db_xref="CDD:187753"
+ misc_feature order(2668561..2668563,2668675..2668683,2668687..2668689,
+ 2668708..2668710,2668720..2668722,2668795..2668812,
+ 2668822..2668824,2668828..2668830,2668834..2668836,
+ 2668933..2668950)
+ /locus_tag="SARI_02758"
+ /note="homodimer interaction site [polypeptide binding];
+ other site"
+ /db_xref="CDD:187753"
+ misc_feature order(2668717..2668719,2668723..2668728,2668810..2668812,
+ 2668834..2668836,2668840..2668842,2668909..2668911,
+ 2668924..2668926)
+ /locus_tag="SARI_02758"
+ /note="cofactor binding site; other site"
+ /db_xref="CDD:187753"
+ unsure 2669113..2669155
+ /locus_tag="SARI_02758"
+ /note="Sequence derived from one plasmid subclone"
+ gene 2669355..2671073
+ /locus_tag="SARI_02759"
+ CDS 2669355..2671073
+ /locus_tag="SARI_02759"
+ /inference="protein motif:FPrintScan:IPR002316"
+ /inference="protein motif:Gene3D:IPR004154"
+ /inference="protein motif:HMMPfam:IPR002314"
+ /inference="protein motif:HMMPfam:IPR004154"
+ /inference="protein motif:HMMPfam:IPR007214"
+ /inference="protein motif:HMMTigr:IPR004500"
+ /inference="protein motif:superfamily:IPR004154"
+ /inference="similar to AA sequence:SwissProt:Q5PD80"
+ /note="catalyzes the formation of prolyl-tRNA(Pro) from
+ proline and tRNA(Pro)"
+ /codon_start=1
+ /transl_table=11
+ /product="prolyl-tRNA synthetase"
+ /protein_id="YP_001571750.1"
+ /db_xref="GI:161504638"
+ /db_xref="InterPro:IPR002314"
+ /db_xref="InterPro:IPR002316"
+ /db_xref="InterPro:IPR004154"
+ /db_xref="InterPro:IPR004500"
+ /db_xref="InterPro:IPR007214"
+ /translation="MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLP
+ TGLRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGER
+ PFVLGPTHEEVITDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDA
+ YSFHTSQESLQETYDAMYAAYSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGE
+ DDIVFSDVSDYAANIELAEAIAPQTPRAAATQEMTLIDTPNAKTIAELVEQFNLPIEK
+ TVKTLLVKAVKDSKSPLVALLVRGDHELNEVKAEKLPNVASPLTFATEEEIRAVINAG
+ PGSLGPVNMPVPVIIDRSVAAMSDFAAGANIDGKHYFGINWDRDVATPIVADIRNVVA
+ GDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCYGIGVTR
+ VVAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVL
+ MDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIVDYL
+ VKAIKG"
+ misc_feature 2669355..2671067
+ /locus_tag="SARI_02759"
+ /note="prolyl-tRNA synthetase; Provisional; Region:
+ PRK09194"
+ /db_xref="CDD:236405"
+ misc_feature 2669403..>2669999
+ /locus_tag="SARI_02759"
+ /note="Prolyl-tRNA synthetase (ProRS) class II core
+ catalytic domain. ProRS is a homodimer. It is responsible
+ for the attachment of proline to the 3' OH group of
+ ribose of the appropriate tRNA. This domain is primarily
+ responsible for ATP-dependent...; Region: ProRS_core_prok;
+ cd00779"
+ /db_xref="CDD:238402"
+ misc_feature order(2669451..2669456,2669475..2669486,2669505..2669507,
+ 2669556..2669564,2669568..2669573,2669631..2669633,
+ 2669637..2669651,2669703..2669705,2669763..2669765,
+ 2669814..2669816)
+ /locus_tag="SARI_02759"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238402"
+ misc_feature 2669550..2669573
+ /locus_tag="SARI_02759"
+ /note="motif 1; other site"
+ /db_xref="CDD:238402"
+ misc_feature order(2669679..2669681,2669685..2669687,2669772..2669774,
+ 2669778..2669780,2669802..2669810,2669817..2669819,
+ 2669823..2669825,2669829..2669831)
+ /locus_tag="SARI_02759"
+ /note="active site"
+ /db_xref="CDD:238402"
+ misc_feature 2669769..2669780
+ /locus_tag="SARI_02759"
+ /note="motif 2; other site"
+ /db_xref="CDD:238402"
+ misc_feature 2670033..2670515
+ /locus_tag="SARI_02759"
+ /note="INS is an amino acid-editing domain inserted (INS)
+ into the bacterial class II prolyl-tRNA synthetase (ProRS)
+ however, this CD is not exclusively bacterial. It is also
+ found at the N-terminus of the eukaryotic/archaea-like
+ ProRS's of yeasts and...; Region: ProRS-INS; cd04334"
+ /db_xref="CDD:239826"
+ misc_feature order(2670189..2670191,2670360..2670365,2670438..2670440)
+ /locus_tag="SARI_02759"
+ /note="putative deacylase active site [active]"
+ /db_xref="CDD:239826"
+ misc_feature <2670561..2670728
+ /locus_tag="SARI_02759"
+ /note="Class II tRNA amino-acyl synthetase-like catalytic
+ core domain. Class II amino acyl-tRNA synthetases (aaRS)
+ share a common fold and generally attach an amino acid to
+ the 3' OH of ribose of the appropriate tRNA. PheRS
+ is an exception in that it...; Region:
+ class_II_aaRS-like_core; cl00268"
+ /db_xref="CDD:241739"
+ misc_feature order(2670576..2670581,2670591..2670593,2670681..2670686,
+ 2670690..2670695,2670702..2670704)
+ /locus_tag="SARI_02759"
+ /note="active site"
+ /db_xref="CDD:238391"
+ misc_feature order(2670693..2670695,2670702..2670704)
+ /locus_tag="SARI_02759"
+ /note="motif 3; other site"
+ /db_xref="CDD:238391"
+ misc_feature 2670771..2671055
+ /locus_tag="SARI_02759"
+ /note="ProRS Prolyl-anticodon binding domain, short
+ version found predominantly in bacteria. ProRS belongs to
+ class II aminoacyl-tRNA synthetases (aaRS). This alignment
+ contains the anticodon binding domain, which is
+ responsible for specificity in tRNA-binding; Region:
+ ProRS_anticodon_short; cd00861"
+ /db_xref="CDD:238438"
+ misc_feature order(2670795..2670800,2670915..2670917,2670933..2670935,
+ 2670957..2670959,2670987..2670989,2670993..2670995)
+ /locus_tag="SARI_02759"
+ /note="anticodon binding site; other site"
+ /db_xref="CDD:238438"
+ gene complement(2671147..2671848)
+ /locus_tag="SARI_02760"
+ CDS complement(2671147..2671848)
+ /locus_tag="SARI_02760"
+ /inference="protein motif:HMMPfam:IPR007298"
+ /inference="protein motif:ScanRegExp:IPR002160"
+ /inference="protein motif:superfamily:IPR011065"
+ /inference="similar to AA sequence:REFSEQ:YP_149589.1"
+ /note="'COG: COG3015 Uncharacterized lipoprotein NlpE
+ involved in copper resistance;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="lipoprotein involved with copper homeostasis and
+ adhesion"
+ /protein_id="YP_001571751.1"
+ /db_xref="GI:161504639"
+ /db_xref="InterPro:IPR002160"
+ /db_xref="InterPro:IPR007298"
+ /db_xref="InterPro:IPR011065"
+ /translation="MVRTAILSVAAACALFALMGCNNRAEVDALQPAQAAELKPMQQS
+ WRGVLPCADCEGIETSLFLEKDGTWVMNERYQGVREEPSSFASYGTWARTADKLVLTD
+ SNGEKSYYRAKGDALEMLDREGNPVASPLNYTLEPVTASLPVTPMPLRGMYVYMADAA
+ TFTDCATGKRLPVASNAQLERGYLAAKGEAEKPVLLTVEGHFVFAANPDTGEPVKMLI
+ ADKNAKFAPGKDCTH"
+ misc_feature complement(2671150..2671848)
+ /locus_tag="SARI_02760"
+ /note="lipoprotein involved with copper homeostasis and
+ adhesion; Provisional; Region: PRK10523"
+ /db_xref="CDD:236708"
+ misc_feature complement(2671459..2671716)
+ /locus_tag="SARI_02760"
+ /note="NlpE N-terminal domain; Region: NlpE; pfam04170"
+ /db_xref="CDD:190894"
+ gene complement(2671880..2672302)
+ /locus_tag="SARI_02761"
+ CDS complement(2671880..2672302)
+ /locus_tag="SARI_02761"
+ /inference="protein motif:HMMPfam:IPR000352"
+ /inference="protein motif:ScanRegExp:IPR000352"
+ /inference="similar to AA sequence:INSD:AAX64146.1"
+ /note="'KEGG: reh:H16_A3611 4.7e-31 pth2; peptidyl-tRNA
+ hydrolase;
+ COG: COG1186 Protein chain release factor B;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="peptidyl-tRNA hydrolase domain protein"
+ /protein_id="YP_001571752.1"
+ /db_xref="GI:161504640"
+ /db_xref="InterPro:IPR000352"
+ /translation="MIAISRTISIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIL
+ ASGLPEYYKQRLLTASHHLISHDGVIIIKAQEYRSQELNREAAIARLVAVIKELTAEQ
+ KSRRATRPTRASKERRLSSKAQKSSVKALRGKVRRPLD"
+ misc_feature complement(2671895..2672302)
+ /locus_tag="SARI_02761"
+ /note="hypothetical protein; Provisional; Region:
+ PRK09256"
+ /db_xref="CDD:181730"
+ misc_feature complement(2671883..>2672293)
+ /locus_tag="SARI_02761"
+ /note="Protein chain release factor B [Translation,
+ ribosomal structure and biogenesis]; Region: PrfB;
+ COG1186"
+ /db_xref="CDD:224107"
+ gene complement(2672299..2672844)
+ /locus_tag="SARI_02762"
+ CDS complement(2672299..2672844)
+ /locus_tag="SARI_02762"
+ /inference="protein motif:HMMPfam:IPR009822"
+ /inference="similar to AA sequence:INSD:AAL19203.1"
+ /note="'KEGG: bpm:BURPS1710b_0319 9.3e-42 YaeQ protein
+ K00356;
+ COG: COG4681 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571753.1"
+ /db_xref="GI:161504641"
+ /db_xref="InterPro:IPR009822"
+ /translation="MALKATIYKAVVNVADLDRNRFLDAALTLARHPSETQERMMLRL
+ LAWIKYADEQLQFTRGLSAEDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAGNV
+ ALFAYNSRAAQIWWQQYQSKCAQFANLSVWYLDDGQLAQLSEFADRTMTLQATIQDGA
+ IWLSDARNNLEIQLAAWQQPS"
+ misc_feature complement(2672302..2672844)
+ /locus_tag="SARI_02762"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG4681"
+ /db_xref="CDD:227026"
+ gene 2673024..2673242
+ /locus_tag="SARI_02763"
+ CDS 2673024..2673242
+ /locus_tag="SARI_02763"
+ /inference="protein motif:HMMPfam:IPR009624"
+ /inference="similar to AA sequence:INSD:AAL19202.1"
+ /note="'COG: NOG13866 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571754.1"
+ /db_xref="GI:161504642"
+ /db_xref="InterPro:IPR009624"
+ /translation="MLTGGHVEKYCELVRKRYAEIASGDLGYVPDALGCVLKVLNEMA
+ ADSALSESVREKAAWAAANLLVSDYVNE"
+ misc_feature 2673042..2673239
+ /locus_tag="SARI_02763"
+ /note="hypothetical protein; Provisional; Region:
+ PRK04964"
+ /db_xref="CDD:179901"
+ gene 2673235..2673489
+ /locus_tag="SARI_02764"
+ CDS 2673235..2673489
+ /locus_tag="SARI_02764"
+ /inference="protein motif:HMMPfam:IPR009778"
+ /inference="similar to AA sequence:REFSEQ:NP_454845.1"
+ /note="Suppresses temperature-sensitive mutations in
+ essential genes by modulating rho-dependent transcription
+ termination"
+ /codon_start=1
+ /transl_table=11
+ /product="Rho-binding antiterminator"
+ /protein_id="YP_001571755.1"
+ /db_xref="GI:161504643"
+ /db_xref="InterPro:IPR009778"
+ /translation="MNETYQPINCDDYDSLELACMHHLILTLTLKDGEILQAKANDLI
+ LRKNVEYLLAEVSGESRELRLDKIVSFSHPEIGTVVISES"
+ misc_feature 2673235..2673486
+ /locus_tag="SARI_02764"
+ /note="Rho-binding antiterminator; Provisional; Region:
+ PRK11625"
+ /db_xref="CDD:183241"
+ gene complement(2673532..2674629)
+ /locus_tag="SARI_02765"
+ CDS complement(2673532..2674629)
+ /locus_tag="SARI_02765"
+ /inference="protein motif:HMMPfam:IPR011063"
+ /inference="protein motif:HMMPIR:IPR012094"
+ /inference="protein motif:HMMTigr:IPR012795"
+ /inference="protein motif:HMMTigr:IPR012796"
+ /inference="similar to AA sequence:INSD:AAQ16558.1"
+ /note="'KEGG: stt:t0238 3.0e-178 mesJ; cell cycle protein
+ MesJ K04075;
+ COG: COG0037 Predicted ATPase of the PP-loop superfamily
+ implicated in cell cycle control;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571756.1"
+ /db_xref="GI:161504644"
+ /db_xref="InterPro:IPR011063"
+ /db_xref="InterPro:IPR012094"
+ /db_xref="InterPro:IPR012795"
+ /db_xref="InterPro:IPR012796"
+ /translation="MCERWQVPLVVERVTLADNGLGIEAHAREARYRAFAQTLLPGEV
+ LATAQHLDDQCETFLLALKRGSGPAGLSAMGERSPFAGTQLLRPLLEETRKTLELWAV
+ RHGLCWIEDESNQDDAYDRNFLRLRALPLLQRRWPHFSAAVARSAALCAEQERLLDEL
+ LTSDLTDCITARGTLRLSPLMSMSDVRRAAILRRWLATRNAPMPSRDALERIWREVAL
+ ARDDASPCLRFGDHEIRRYQSQLWWIKSIAGQSETTIAWPVWQTPLALPAGLGSVQLV
+ PGGELRLPREEESVSIRFKASGLLHIVGRHGGRKLKKIWQELNVPSWRRDTTPLLFYG
+ DTLIAAAGHFITCDGLANSEDGMALLWREDA"
+ misc_feature complement(2674270..>2674626)
+ /locus_tag="SARI_02765"
+ /note="N-terminal domain of predicted ATPase of the
+ PP-loop faimly implicated in cell cycle control [Cell
+ division and chromosome partitioning]. This is a subfamily
+ of Adenine nucleotide alpha hydrolases
+ superfamily.Adeninosine nucleotide alpha hydrolases...;
+ Region: PP-ATPase; cd01992"
+ /db_xref="CDD:238950"
+ misc_feature complement(2673901..2674107)
+ /locus_tag="SARI_02765"
+ /note="TilS substrate binding domain; Region: TilS;
+ pfam09179"
+ /db_xref="CDD:204159"
+ misc_feature complement(2673547..2673762)
+ /locus_tag="SARI_02765"
+ /note="TilS substrate C-terminal domain; Region: TilS_C;
+ pfam11734"
+ /db_xref="CDD:221192"
+ gene 2674675..2674803
+ /locus_tag="SARI_02766"
+ CDS 2674675..2674803
+ /locus_tag="SARI_02766"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571757.1"
+ /db_xref="GI:161504645"
+ /translation="MMNMDSAQRNVRMVFSPQHQLMQKHRRIQAAAKGGQNTARRE"
+ gene complement(2674893..2675321)
+ /locus_tag="SARI_02767"
+ CDS complement(2674893..2675321)
+ /locus_tag="SARI_02767"
+ /inference="protein motif:BlastProDom:IPR011588"
+ /inference="protein motif:HMMPfam:IPR004360"
+ /inference="protein motif:ScanRegExp:IPR004361"
+ /inference="similar to AA sequence:INSD:AAL19199.1"
+ /note="'KEGG: stm:STM0235 3.9e-66 yaeR; putative
+ lactoylglutaTHIone lyase K01759;
+ COG: COG0346 LactoylglutaTHIone lyase and related lyases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571758.1"
+ /db_xref="GI:161504646"
+ /db_xref="InterPro:IPR004360"
+ /db_xref="InterPro:IPR004361"
+ /db_xref="InterPro:IPR011588"
+ /translation="MASNVLIINKGDAMLGLKQVHHIAIIVTDYAASKAFYCDILGFE
+ LISEVWREERDSWKGDLALNGQYVIELFSFPFPPARPSRPEACGLRHLAFSVENIENA
+ VAHLKRHQVKCEPIRVDPYTGKRFTFFNDPDGLPLELYEQ"
+ misc_feature complement(2674899..2675273)
+ /locus_tag="SARI_02767"
+ /note="This conserved domain belongs to a superfamily
+ including the bleomycin resistance protein, glyoxalase I,
+ and type I ring-cleaving dioxygenases; Region:
+ Glo_EDI_BRP_like_1; cd08352"
+ /db_xref="CDD:211358"
+ misc_feature complement(2674905..2675267)
+ /locus_tag="SARI_02767"
+ /note="Glyoxalase/Bleomycin resistance protein/Dioxygenase
+ superfamily; Region: Glyoxalase; pfam00903"
+ /db_xref="CDD:216182"
+ misc_feature complement(order(2674908..2674910,2675049..2675051,
+ 2675256..2675258))
+ /locus_tag="SARI_02767"
+ /note="putative metal binding site [ion binding]; other
+ site"
+ /db_xref="CDD:211358"
+ gene complement(2675338..2677479)
+ /locus_tag="SARI_02768"
+ CDS complement(2675338..2677479)
+ /locus_tag="SARI_02768"
+ /inference="protein motif:HMMPfam:IPR000310"
+ /inference="protein motif:HMMPfam:IPR005308"
+ /inference="protein motif:HMMPfam:IPR008286"
+ /inference="protein motif:HMMPIR:IPR011193"
+ /inference="protein motif:ScanRegExp:IPR000310"
+ /inference="protein motif:superfamily:IPR008286"
+ /note="'KEGG: sec:SC0234 0. ldcC; lysine decarboxylase 2,
+ constitutive K01582;
+ COG: COG1982 Arginine/lysine/orniTHIne decarboxylases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571759.1"
+ /db_xref="GI:161504647"
+ /db_xref="InterPro:IPR000310"
+ /db_xref="InterPro:IPR005308"
+ /db_xref="InterPro:IPR008286"
+ /db_xref="InterPro:IPR011193"
+ /translation="MNIIAIMGPRGVYYKDEPIKELERALQSLGFQIIWPQNSVDLLK
+ FIEHNPRICGVIFDWDEYSLDLCSDINQLNEYLPLYAFINTNSTLDVSVHDMRMALWF
+ FEYALGQAEDIATRIHQYTNEYLDNITPPFTKALFTYAKEGKYTFCTPGHMAGTAYQK
+ SPAGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYMVTN
+ GTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPLWLKPTRNALGILGGIP
+ KREFTRDSIARKVAETAQAQWPVHAVITNSTYDGLLYNTNWLKQMLDVPSIHFDSAWV
+ PYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNEA
+ FMMHTSTSPSYPIVASIETAAAMLRGNAGRRLINRSVERALHFRKEVRRLREESDSWF
+ FDIWQPEEVDEAECWPVAQGETWHGFTDADDDHMFLDPVKVTILTPGMDEQGNMSEEG
+ IPAALVAKFLDERGVVVEKTGPYNLLFLFSIGIDKTRAMGLMRGLTEFKRAYDLNLRV
+ KNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRQHDLPGLMLRAFDVLPEMIMTPHQAW
+ QRQIKGEVETVALDQLPGRVSANMILPYPPGVPLLMPGERISKESRAVLDFLQMLCSI
+ GQHYPGFETDIHGAKQNEDGVYQVRVLKHAC"
+ misc_feature complement(2675341..2677479)
+ /locus_tag="SARI_02768"
+ /note="lysine decarboxylase LdcC; Provisional; Region:
+ PRK15399"
+ /db_xref="CDD:185297"
+ misc_feature complement(2677108..2677440)
+ /locus_tag="SARI_02768"
+ /note="Orn/Lys/Arg decarboxylase, N-terminal domain;
+ Region: OKR_DC_1_N; pfam03709"
+ /db_xref="CDD:217683"
+ misc_feature complement(2676163..2677089)
+ /locus_tag="SARI_02768"
+ /note="Ornithine decarboxylase family. This family belongs
+ to pyridoxal phosphate (PLP)-dependent aspartate
+ aminotransferase superfamily (fold I). The major groups in
+ this CD corresponds to ornithine decarboxylase (ODC),
+ arginine decarboxylase (ADC) and lysine...; Region:
+ Orn_deC_like; cd00615"
+ /db_xref="CDD:99739"
+ misc_feature complement(order(2676205..2676210,2676247..2676249,
+ 2676256..2676258,2676265..2676267,2676286..2676288,
+ 2676292..2676300,2676304..2676309,2676358..2676372,
+ 2676379..2676384,2676742..2676747,2676778..2676783,
+ 2676787..2676795,2676805..2676807,2676814..2676819,
+ 2676823..2676831,2676904..2676906,2676928..2676930,
+ 2676943..2676945))
+ /locus_tag="SARI_02768"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99739"
+ misc_feature complement(order(2676379..2676384,2676388..2676390,
+ 2676481..2676486,2676490..2676492,2676568..2676570,
+ 2676739..2676741,2676745..2676747,2676817..2676825))
+ /locus_tag="SARI_02768"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:99739"
+ misc_feature complement(2676379..2676381)
+ /locus_tag="SARI_02768"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:99739"
+ misc_feature complement(2675368..2675772)
+ /locus_tag="SARI_02768"
+ /note="Orn/Lys/Arg decarboxylase, C-terminal domain;
+ Region: OKR_DC_1_C; pfam03711"
+ /db_xref="CDD:112521"
+ gene complement(2677555..2679360)
+ /locus_tag="SARI_02769"
+ CDS complement(2677555..2679360)
+ /locus_tag="SARI_02769"
+ /inference="protein motif:BlastProDom:IPR000726"
+ /inference="protein motif:HMMPfam:IPR000601"
+ /inference="protein motif:HMMPfam:IPR000726"
+ /inference="protein motif:HMMSmart:IPR000601"
+ /inference="protein motif:superfamily:IPR000601"
+ /inference="protein motif:superfamily:IPR003610"
+ /note="'KEGG: bam:Bamb_1428 2.2e-32 chitinase K01183;
+ COG: COG3979 Uncharacterized protein contain
+ chitin-binding domain type 3;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571760.1"
+ /db_xref="GI:161504648"
+ /db_xref="InterPro:IPR000601"
+ /db_xref="InterPro:IPR000726"
+ /db_xref="InterPro:IPR003610"
+ /translation="MARAGSELPFKEKIMGLQKTLALSAVAAGIMLSLSGAQAAPLLS
+ SSEPMTINASDLAAKEKALTDFPLMEAVKSSIQTLDNSVVEQIEPGRAANPANVKRVE
+ SILTEADWDYLFPMRAPEYTYSNFLKAIGKFPAVCGTYTDGRDSDAICRKTLATMFAH
+ FAQETGGHESWRDIPEWRQALVYLREVGWTEGQKGGYNGECNPDVWQGQTWPCGKDKD
+ GDFLSYFGRGAKQLSYNYNYGPFSDAMYGDVRPLLDKPELVADTWMNLASAVFFFVYP
+ QPPKPSMLHVIDGTWQPNEHDKANGLVSGFGVTIQIINGGVECGGADENAQSLNRIAY
+ YKEFADYLKVPVPADEVLGCKNMKQFDEGGAGALPIYWEEDWGWSADTADGKTYSCQL
+ VGYQTPYTAFKEGDYTKCVQHYFNVNVIDDNGGAEPDVTPAPTPVTDENVAPVARIAG
+ PVGAVEAGSPVSLSAEGSTDANGDKLTYTWMSQDGKTLSGQDKAIVIFNAPEVTQDTQ
+ YVVNLTVSDGSLSSTAVYTLNVKAKAAAADDEDKTTSYPAWSSSQKWNPGDIVNNNGA
+ LYQCKPFPASSWCNVAPAYYEPGVGIAWADAWSAL"
+ misc_feature complement(2678644..2679249)
+ /locus_tag="SARI_02769"
+ /note="Uncharacterized protein contain chitin-binding
+ domain type 3 [General function prediction only]; Region:
+ COG3979"
+ /db_xref="CDD:226487"
+ misc_feature complement(2678299..2679072)
+ /locus_tag="SARI_02769"
+ /note="Glycoside hydrolase family 19 chitinase domain.
+ Chitinases are enzymes that catalyze the hydrolysis of the
+ beta-1,4-N-acetyl-D-glucosamine linkages in chitin
+ polymers. Family 19 chitinases are found primarily in
+ plants (classes I, III, and IV), but some...; Region:
+ chitinase_glyco_hydro_19; cd00325"
+ /db_xref="CDD:238199"
+ misc_feature complement(order(2678380..2678382,2678419..2678421,
+ 2678650..2678655,2678668..2678670,2678803..2678805,
+ 2678869..2678871))
+ /locus_tag="SARI_02769"
+ /note="putative sugar binding site [chemical binding];
+ other site"
+ /db_xref="CDD:238199"
+ misc_feature complement(order(2678662..2678664,2678803..2678805,
+ 2678869..2678871))
+ /locus_tag="SARI_02769"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:238199"
+ misc_feature complement(2677789..2678019)
+ /locus_tag="SARI_02769"
+ /note="PKD domain; Region: PKD; pfam00801"
+ /db_xref="CDD:216128"
+ gene complement(2679638..2680597)
+ /locus_tag="SARI_02770"
+ CDS complement(2679638..2680597)
+ /locus_tag="SARI_02770"
+ /inference="protein motif:HMMPfam:IPR001095"
+ /inference="protein motif:HMMTigr:IPR001095"
+ /inference="protein motif:superfamily:IPR010982"
+ /inference="similar to AA sequence:INSD:"
+ /note="catalyzes the carboxylation of acetyl-CoA to
+ malonyl-CoA; forms a tetramer composed of two alpha (AccA)
+ and two beta (AccD) subunits; one of the two catalytic
+ subunits that can form the acetyl CoA carboxylase enzyme
+ together with a carrier protein"
+ /codon_start=1
+ /transl_table=11
+ /product="acetyl-CoA carboxylase carboxyltransferase
+ subunit alpha"
+ /protein_id="YP_001571761.1"
+ /db_xref="GI:161504649"
+ /db_xref="InterPro:IPR001095"
+ /db_xref="InterPro:IPR010982"
+ /translation="MSLNFLDFEQPIAELEAKIDSLTAVSRQDEKLDINIDEEVHRLR
+ EKSVELTRKIFADLGAWQVAQLARHPQRPYTLDYVRLAFDEFDELAGDRAYADDKAIV
+ GGIARLEGRPVMVIGHQKGRETKEKIRRNFGMPAPEGYRKALRLMEMAERFNMPIITF
+ IDTPGAYPGVGAEERGQSEAIARNLREMSRLNVPIICTVIGEGGSGGALAIGVGDKVN
+ MLQYSTYSVISPEGCASILWKSADKAPLAAEAMGIIAPRLKELKLIDSIIPEPLGGAH
+ RNPEVMAASLKAQLLEDLADLDVLSTDDLKNRRYQRLMSYGYA"
+ misc_feature complement(2679644..2680597)
+ /locus_tag="SARI_02770"
+ /note="acetyl-CoA carboxylase carboxyltransferase subunit
+ alpha; Validated; Region: PRK05724"
+ /db_xref="CDD:235580"
+ misc_feature complement(2679644..2680597)
+ /locus_tag="SARI_02770"
+ /note="acetyl-CoA carboxylase carboxyltransferase alpha
+ subunit; Provisional; Region: accA; CHL00198"
+ /db_xref="CDD:214393"
+ gene complement(2680610..2684044)
+ /gene="dnaE"
+ /locus_tag="SARI_02771"
+ CDS complement(2680610..2684044)
+ /gene="dnaE"
+ /locus_tag="SARI_02771"
+ /inference="protein motif:HMMPfam:IPR004013"
+ /inference="protein motif:HMMPfam:IPR004365"
+ /inference="protein motif:HMMPfam:IPR011708"
+ /inference="protein motif:HMMSmart:IPR003141"
+ /inference="protein motif:HMMTigr:IPR004805"
+ /inference="protein motif:superfamily:IPR008994"
+ /note="catalyzes DNA-template-directed extension of the
+ 3'- end of a DNA strand by one nucleotide at a time; main
+ replicative polymerase"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA polymerase III subunit alpha"
+ /protein_id="YP_001571762.1"
+ /db_xref="GI:161504650"
+ /db_xref="InterPro:IPR003141"
+ /db_xref="InterPro:IPR004013"
+ /db_xref="InterPro:IPR004365"
+ /db_xref="InterPro:IPR004805"
+ /db_xref="InterPro:IPR008994"
+ /db_xref="InterPro:IPR011708"
+ /translation="MIDGLAKTGPLVKKAASLGMPALAITDFTNLCGLVKFYGAGHGA
+ GIKPIVGADFNVHNELLGDELTHLTVLASDNTGYQNLTLLISKAYQRGYGASGPIVDR
+ DWLIELKEGLILLSGGRMGDVGRCLLRGNQALVEECVAFYEAHFPDRYFLELIRTGRQ
+ DEETYLHAAVELAEARGLPVVATNDVRFLESDDFDAHEIRVAIHDGFTLDDPKRPRNY
+ SPQQYMRSIDEMCELFADIPEALENTVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDYL
+ VKKSKEGLEERLAFLFPDEEERKKRRPEYDERLNIELQVINQMGFPGYFLIVMEFIQW
+ SKDNGVPVGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCM
+ EKRDQVIEHVADMYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPD
+ PGMTLAKAFEAEPQLPEIYEADEEVRALIDMARKLEGVTRNAGKHAGGVVIAPTKITD
+ FAPLYCDEEGKHPVTQFDKSDVEYAGLVKFDFLGLRTLTIINWALEMINKRREKNGEP
+ PLDIAAIPLDDKKSFDMLQRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRP
+ GPLQSGMVDNFIDRKHGREELSYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLS
+ GYTLGGADMLRRAMGKKKPEEMAKQRSVFEEGAKKNGIDGELAMKIFDLVEKFAGYGF
+ NKSHSAAYALVSYQTLWLKAHYPAEFMAAVMTADMDNTEKVVGLVDECWRMGLKILPP
+ DINSGLYHFHVNDEGEIVYGIGAIKGVGEGPIEAIIDARNQGGYFRELFDLCARTDTK
+ KLNRRVLEKLIMSGAFDRLGPHRAALMNSLGDALKAADQHAKAEAIGQTDMFGVLAEE
+ PEQIEQSYASCQPWPEQMVLDGERETLGLYLTGHPINQYLKEIERYVGGVRLKDMHPT
+ ERGKVTTAAGLVIAARVMVTKRGNRIGICTLDDRSGRLEVMLFTDALDKYQQLLEKDR
+ ILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKYARGLAISLTDRQIDDQLLNRLRQS
+ LEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSDRLLNDLRGLIGSEQVELEFD"
+ misc_feature complement(2680640..2684044)
+ /gene="dnaE"
+ /locus_tag="SARI_02771"
+ /note="DNA polymerase III subunit alpha; Validated;
+ Region: dnaE; PRK05673"
+ /db_xref="CDD:235554"
+ misc_feature complement(2683250..2684044)
+ /gene="dnaE"
+ /locus_tag="SARI_02771"
+ /note="Polymerase and Histidinol Phosphatase domain of
+ alpha-subunit of bacterial polymerase III DnaE1; Region:
+ PHP_PolIIIA_DnaE1; cd07433"
+ /db_xref="CDD:213988"
+ misc_feature complement(order(2683484..2683486,2683490..2683492,
+ 2683886..2683888,2683961..2683963,2684036..2684038))
+ /gene="dnaE"
+ /locus_tag="SARI_02771"
+ /note="putative active site [active]"
+ /db_xref="CDD:213988"
+ misc_feature complement(order(2683289..2683291,2683901..2683909,
+ 2683919..2683921))
+ /gene="dnaE"
+ /locus_tag="SARI_02771"
+ /note="putative PHP Thumb interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:213988"
+ misc_feature complement(2680853..2681110)
+ /gene="dnaE"
+ /locus_tag="SARI_02771"
+ /note="DnaE_OBF: A subfamily of OB folds corresponding to
+ the C-terminal OB-fold nucleic acid binding domain of
+ Thermus aquaticus and Escherichia coli type C replicative
+ DNA polymerase III alpha subunit (DnaE). The DNA
+ polymerase holoenzyme of E. coli contains...; Region:
+ DnaE_OBF; cd04485"
+ /db_xref="CDD:239931"
+ misc_feature complement(order(2680880..2680882,2680940..2680942,
+ 2680946..2680948,2680952..2680954,2681108..2681110))
+ /gene="dnaE"
+ /locus_tag="SARI_02771"
+ /note="generic binding surface II; other site"
+ /db_xref="CDD:239931"
+ misc_feature complement(order(2680895..2680903,2680928..2680936,
+ 2680955..2680957,2681000..2681002,2681006..2681014,
+ 2681030..2681032,2681036..2681047,2681087..2681095))
+ /gene="dnaE"
+ /locus_tag="SARI_02771"
+ /note="generic binding surface I; other site"
+ /db_xref="CDD:239931"
+ gene complement(2684116..2684712)
+ /gene="rnhB"
+ /locus_tag="SARI_02772"
+ CDS complement(2684116..2684712)
+ /gene="rnhB"
+ /locus_tag="SARI_02772"
+ /inference="protein motif:HMMPanther:IPR001352"
+ /inference="protein motif:HMMPfam:IPR001352"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:REFSEQ:YP_215217.1"
+ /note="RNH2; RNase HII; binds manganese; endonuclease
+ which specifically degrades the RNA of RNA-DNA hybrids"
+ /codon_start=1
+ /transl_table=11
+ /product="ribonuclease HII"
+ /protein_id="YP_001571763.1"
+ /db_xref="GI:161504651"
+ /db_xref="InterPro:IPR001352"
+ /db_xref="InterPro:IPR012337"
+ /translation="MIEFVYPHTHLVAGVDEVGRGPLVGAVVTAAVILDPARPIVGLN
+ DSKKLSEKRRLALYDEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAP
+ EYVLIDGNRCPALPVPSMAVVKGDSRVAEISAASILAKVTRDAEMAALDIIFPQYGFA
+ QHKGYPTAFHLEKLAQYGATAHHRRSFAPVKRALELAS"
+ misc_feature complement(2684140..2684676)
+ /gene="rnhB"
+ /locus_tag="SARI_02772"
+ /note="bacterial Ribonuclease HII-like; Region:
+ RNase_HII_bacteria_HII_like; cd07182"
+ /db_xref="CDD:187695"
+ misc_feature complement(order(2684293..2684295,2684350..2684352,
+ 2684389..2684391,2684449..2684451,2684458..2684466,
+ 2684656..2684667))
+ /gene="rnhB"
+ /locus_tag="SARI_02772"
+ /note="RNA/DNA hybrid binding site [nucleotide binding];
+ other site"
+ /db_xref="CDD:187695"
+ misc_feature complement(order(2684335..2684337,2684389..2684391,
+ 2684662..2684667))
+ /gene="rnhB"
+ /locus_tag="SARI_02772"
+ /note="active site"
+ /db_xref="CDD:187695"
+ gene complement(2684709..2685857)
+ /gene="lpxB"
+ /locus_tag="SARI_02773"
+ CDS complement(2684709..2685857)
+ /gene="lpxB"
+ /locus_tag="SARI_02773"
+ /inference="protein motif:HMMPfam:IPR003835"
+ /inference="protein motif:HMMTigr:IPR003835"
+ /inference="similar to AA sequence:INSD:AAX64135.1"
+ /note="'catalyzes the formation of lipid A disaccharide
+ from UDP-2,3-diacylglucosamine and
+ 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is
+ a precursor of lipid A that anchors LPS to the OM'"
+ /codon_start=1
+ /transl_table=11
+ /product="lipid-A-disaccharide synthase"
+ /protein_id="YP_001571764.1"
+ /db_xref="GI:161504652"
+ /db_xref="InterPro:IPR003835"
+ /translation="MAAQRPLTIALVAGETSGDILGAGLIRALKARVPNARFVGVAGP
+ RMQAEGCEAWYEMEELAVMGIVEVLGRLRRLLHIRADLTRRFTALKPDVFVGIDAPDF
+ NITLEGNLKKQGIKTIHYVSPSVWAWRQKRVFKIGRSTHMVLAFLPFEKAFYDKFNVP
+ CRFIGHTMADAMPLDPNKNTARDVLGIPHDAHCLALLPGSRGAEVEMLSADFLKTAQL
+ LRQHYPDLEVVVPLVNAKRREQFEKIKAEIAPDLAVHLLDGMGREAMVASDAALLASG
+ TAALECMLAKCPMVVGYRMKPFTFWLAKRLVKTEYVSLPNLLAGRELVKELLQEECEP
+ QKLAEALLPLLANGKTSHVMHDTFRELHQQIRCNADEQAADAVLELAQ"
+ misc_feature complement(2684712..2685842)
+ /gene="lpxB"
+ /locus_tag="SARI_02773"
+ /note="lipid-A-disaccharide synthase; Reviewed; Region:
+ lpxB; PRK00025"
+ /db_xref="CDD:234580"
+ misc_feature complement(2684838..2685836)
+ /gene="lpxB"
+ /locus_tag="SARI_02773"
+ /note="ipid-A-disaccharide synthase; Provisional; Region:
+ PRK14089"
+ /db_xref="CDD:237606"
+ gene complement(2685857..2686645)
+ /locus_tag="SARI_02774"
+ CDS complement(2685857..2686645)
+ /locus_tag="SARI_02774"
+ /inference="protein motif:HMMPfam:IPR001451"
+ /inference="protein motif:HMMPIR:IPR010137"
+ /inference="protein motif:HMMTigr:IPR010137"
+ /inference="protein motif:ScanRegExp:IPR001451"
+ /inference="protein motif:superfamily:IPR011004"
+ /inference="similar to AA sequence:INSD:CAA80950.1"
+ /note="catalyzes the addition of
+ (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide
+ in lipid A biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="UDP-N-acetylglucosamine acyltransferase"
+ /protein_id="YP_001571765.1"
+ /db_xref="GI:161504653"
+ /db_xref="InterPro:IPR001451"
+ /db_xref="InterPro:IPR010137"
+ /db_xref="InterPro:IPR011004"
+ /translation="MIDKSAFIHPTAIVEDGAVLGANVHIGPFCIVGPQVEIGEGTVL
+ KSHVVVNGQTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGT
+ VQGGGLTKVGSDNLLMINAHVAHDCTVGNRCILANNATLAGHVSIDDFAIIGGMTAVH
+ QFCIIGAHVMVGGCSGVAQDVPPYVIAQGNHATPFGVNIEGLKRRGFSREGIVAIRNA
+ YKLLYRSGKTLDDAKLEIAELAEKHPEVKAFTEFFERSTRGPIR"
+ misc_feature complement(2685860..2686636)
+ /locus_tag="SARI_02774"
+ /note="UDP-N-acetylglucosamine acyltransferase;
+ Provisional; Region: PRK05289"
+ /db_xref="CDD:235390"
+ misc_feature complement(2685869..2686624)
+ /locus_tag="SARI_02774"
+ /note="UDP-N-acetylglucosamine O-acyltransferase
+ (UDP-GlcNAc acyltransferase): Proteins in this family
+ catalyze the transfer of (R)-3-hydroxymyristic acid from
+ its acyl carrier protein thioester to UDP-GlcNAc. It is
+ the first enzyme in the lipid A biosynthetic...; Region:
+ LbH_UDP-GlcNAc_AT; cd03351"
+ /db_xref="CDD:100042"
+ misc_feature complement(order(2686031..2686036,2686052..2686054,
+ 2686127..2686129,2686163..2686168,2686214..2686216,
+ 2686271..2686273,2686280..2686282,2686349..2686351,
+ 2686418..2686420,2686427..2686429))
+ /locus_tag="SARI_02774"
+ /note="active site"
+ /db_xref="CDD:100042"
+ gene complement(2686649..2687104)
+ /gene="fabZ"
+ /locus_tag="SARI_02775"
+ CDS complement(2686649..2687104)
+ /gene="fabZ"
+ /locus_tag="SARI_02775"
+ /inference="protein motif:HMMPfam:IPR013114"
+ /inference="protein motif:HMMTigr:IPR010084"
+ /inference="similar to AA sequence:REFSEQ:YP_215214.1"
+ /note="in Pseudomonas aeruginosa this enzyme is a trimer
+ of dimers; essential for membrane formation; performs
+ third step of type II fatty acid biosynthesis; catalyzes
+ dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP"
+ /codon_start=1
+ /transl_table=11
+ /product="(3R)-hydroxymyristoyl-ACP dehydratase"
+ /protein_id="YP_001571766.1"
+ /db_xref="GI:161504654"
+ /db_xref="InterPro:IPR010084"
+ /db_xref="InterPro:IPR013114"
+ /translation="MTTNTHTLQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNV
+ SVNEPFFQGHFPGKPILPGVLILEAMAQATGILAFKSVGKLEPGELYYFAGIDEARFK
+ RPVVPGDQMIMEVTFEKTRRGLTRFKGVALVDGKVVCEATMMCARSREA"
+ misc_feature complement(2686667..2687056)
+ /gene="fabZ"
+ /locus_tag="SARI_02775"
+ /note="FabZ is a 17kD beta-hydroxyacyl-acyl carrier
+ protein (ACP) dehydratase that primarily catalyzes the
+ dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP,
+ the third step in the elongation phase of the bacterial/
+ plastid, type II, fatty-acid...; Region: FabZ; cd01288"
+ /db_xref="CDD:238615"
+ gene complement(2687210..2688235)
+ /gene="lpxD"
+ /locus_tag="SARI_02776"
+ CDS complement(2687210..2688235)
+ /gene="lpxD"
+ /locus_tag="SARI_02776"
+ /inference="protein motif:HMMPfam:IPR007691"
+ /inference="protein motif:HMMTigr:IPR007691"
+ /inference="protein motif:ScanRegExp:IPR001451"
+ /inference="protein motif:superfamily:IPR011004"
+ /inference="similar to AA sequence:INSD:AAV76262.1"
+ /note="adds the O-linked and N-linked 3(R)-hydroxy fatty
+ acids to the glucosamine disaccharide during lipid A
+ biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="UDP-3-O-[3-hydroxymyristoyl] glucosamine
+ N-acyltransferase"
+ /protein_id="YP_001571767.1"
+ /db_xref="GI:161504655"
+ /db_xref="InterPro:IPR001451"
+ /db_xref="InterPro:IPR007691"
+ /db_xref="InterPro:IPR011004"
+ /translation="MPSIRLADLAEQLDAELHGDGDIVITGVASMQSATTGHITFMVN
+ PKYREHLGLCQASAVVMTQDDLPFAKSAALVVQNPYLTYARMAQILDTTPQPAQNIAP
+ SAVIDATATLGSNVSVGANVVIESGVQLGDNVVIGAGCFVGKNTKIGAGSRLWANVTI
+ YHDIQIGENCLIQSSTVIGADGFGYANDRGNWVKIPQLGRVIIGDRVEIGACTTIDRG
+ ALDDTVIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGH
+ MEICDKVTVTGMGMVMRPITEPGVYSSGIPLQPNKVWRKTAALVMNIDDMSKRLKAIE
+ RKVNQQD"
+ misc_feature complement(2687216..2688184)
+ /gene="lpxD"
+ /locus_tag="SARI_02776"
+ /note="UDP-3-O-[3-hydroxymyristoyl] glucosamine
+ N-acyltransferase; Provisional; Region: lpxD; PRK00892"
+ /db_xref="CDD:234858"
+ misc_feature complement(2687966..2688175)
+ /gene="lpxD"
+ /locus_tag="SARI_02776"
+ /note="UDP-3-O-[3-hydroxymyristoyl] glucosamine
+ N-acyltransferase, LpxD; Region: LpxD; pfam04613"
+ /db_xref="CDD:218175"
+ misc_feature complement(2687294..2687911)
+ /gene="lpxD"
+ /locus_tag="SARI_02776"
+ /note="UDP-3-O-acyl-glucosamine N-acyltransferase (LpxD):
+ The enzyme catalyzes the transfer of 3-hydroxymyristic
+ acid or 3-hydroxy-arachidic acid, depending on the
+ organism, from the acyl carrier protein (ACP) to
+ UDP-3-O-acyl-glucosamine to produce UDP-2; Region:
+ LbH_LpxD; cd03352"
+ /db_xref="CDD:100043"
+ misc_feature complement(order(2687300..2687302,2687312..2687314,
+ 2687366..2687374,2687408..2687410,2687420..2687428,
+ 2687444..2687446,2687474..2687482,2687492..2687494,
+ 2687498..2687500,2687516..2687518,2687528..2687530,
+ 2687534..2687542,2687546..2687548,2687573..2687581,
+ 2687588..2687590,2687594..2687596,2687600..2687602,
+ 2687612..2687614,2687648..2687656,2687687..2687689,
+ 2687693..2687695,2687711..2687713,2687717..2687719,
+ 2687753..2687755,2687759..2687761,2687765..2687767,
+ 2687804..2687806,2687858..2687863,2687873..2687875))
+ /gene="lpxD"
+ /locus_tag="SARI_02776"
+ /note="trimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:100043"
+ misc_feature complement(order(2687375..2687377,2687408..2687413,
+ 2687462..2687470,2687483..2687488,2687516..2687521,
+ 2687528..2687530,2687540..2687542,2687681..2687689))
+ /gene="lpxD"
+ /locus_tag="SARI_02776"
+ /note="active site"
+ /db_xref="CDD:100043"
+ misc_feature complement(order(2687408..2687413,2687462..2687467,
+ 2687516..2687521,2687681..2687689))
+ /gene="lpxD"
+ /locus_tag="SARI_02776"
+ /note="UDP-GlcNAc binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:100043"
+ misc_feature complement(order(2687375..2687377,2687468..2687470,
+ 2687483..2687488,2687528..2687530,2687540..2687542))
+ /gene="lpxD"
+ /locus_tag="SARI_02776"
+ /note="lipid binding site [chemical binding];
+ lipid-binding site"
+ /db_xref="CDD:100043"
+ gene complement(2688239..2688724)
+ /locus_tag="SARI_02777"
+ CDS complement(2688239..2688724)
+ /locus_tag="SARI_02777"
+ /inference="protein motif:HMMPfam:IPR005632"
+ /inference="similar to AA sequence:INSD:AAX64131.1"
+ /note="'COG: COG2825 Outer membrane protein;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="periplasmic chaperone"
+ /protein_id="YP_001571768.1"
+ /db_xref="GI:161504656"
+ /db_xref="InterPro:IPR005632"
+ /translation="MKKWLLAAGLGLAMATSAQAADKIAIVNMGNLFQQVAQKTGVSN
+ TLENEFKGRAAELQKMETDLQSKMQRLQSMKSGSDRTKLEKDVMSQRQTFAQKAQAFE
+ RDRARRSNEERGKLVTRIQTAVKKVANDQSIDLVVDANTVAYNSSDVKDITADVLKQV
+ K"
+ misc_feature complement(2688242..2688724)
+ /locus_tag="SARI_02777"
+ /note="periplasmic chaperone; Provisional; Region:
+ PRK10780"
+ /db_xref="CDD:182724"
+ misc_feature complement(2688242..2688655)
+ /locus_tag="SARI_02777"
+ /note="Outer membrane protein (OmpH-like); Region: OmpH;
+ smart00935"
+ /db_xref="CDD:214922"
+ unsure 2688311..2688399
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(2688847..2691279)
+ /locus_tag="SARI_02778"
+ CDS complement(2688847..2691279)
+ /locus_tag="SARI_02778"
+ /inference="protein motif:HMMPanther:IPR000184"
+ /inference="protein motif:HMMPfam:IPR000184"
+ /inference="protein motif:HMMPfam:IPR010827"
+ /note="'part of a complex with YfgL, YfiO, and NlpB
+ involved in outer membrane protein biosynthesis; involved
+ in the assembly of outer membrane proteins'"
+ /codon_start=1
+ /transl_table=11
+ /product="outer membrane protein assembly factor YaeT"
+ /protein_id="YP_001571769.1"
+ /db_xref="GI:161504657"
+ /db_xref="InterPro:IPR000184"
+ /db_xref="InterPro:IPR010827"
+ /translation="MAMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALL
+ SMPVRTGDTVNDEDISNTIRALFATGNFEDVRVLRDGDTLLVQVKERPTIASITFSGN
+ KSVKDDMLKQNLEASGVRVGESLDRTTLSDIEKGLEDFYYSVGKYSASVKAVVTPLPR
+ NRVDLKLVFQEGVSAKIQQINIVGNHAFSTEELISHFQLRDEVPWWNVVGDRKYQKQK
+ LAGDLETLRSYYLDRGYARFNIDSTQVSLTPDKKGIYITVNITEGDQYKLSGVEVSGN
+ LAGHSAEIENLTKIEPGELYNGTKVTKMEDDIKKLLGRYGYAYPRVQSQPEINDADKT
+ VKLRVNVDAGNRFYVRKIRFEGNDTSKDSVLRREMRQMEGAWLGSDLVDQGKERLNRL
+ GYFETVDTDTQRVPGSPDQVDVVYKVKERNTGSFNFGIGYGTESGVSFQAGVQQDNWL
+ GTGYSVGINGTKNDYQTYSELSVTNPYFTVDGVSLGGRIFYNDFQADDADLSDYTNKS
+ YGSDVTLGFPINEYNTLRAGVGYVHNSLSNMEPQVAMWRYLYSMGEHPNTDDQNNSFK
+ TDDFTFNYGWTYNKLDRGFFPTEGTRINLNGKVTIPGSDNEYYKATLDTATYVPIDDD
+ HKWVILGRTRFGYGDGFGGKEMPFYENFYAGGSSTVRGFQSNTIGPKAVYFPHAASNY
+ DPDDDYECATQDGAKDMCKSDDAVGGNAMAVASLEFITPTPFISEKYANSVRTSFFWD
+ MGTVWDTNWDSSQYSGYPDYSDPSNIRMSAGIALQWMSPLGPLVFSYAQPFKKYDGDK
+ AEQFQFNIGKTW"
+ misc_feature complement(2688850..2691279)
+ /locus_tag="SARI_02778"
+ /note="outer membrane protein assembly factor YaeT;
+ Provisional; Region: PRK11067"
+ /db_xref="CDD:236834"
+ misc_feature complement(2691007..2691210)
+ /locus_tag="SARI_02778"
+ /note="Surface antigen variable number repeat; Region:
+ Surf_Ag_VNR; pfam07244"
+ /db_xref="CDD:219346"
+ misc_feature complement(2690764..2691006)
+ /locus_tag="SARI_02778"
+ /note="Surface antigen variable number repeat; Region:
+ Surf_Ag_VNR; pfam07244"
+ /db_xref="CDD:219346"
+ misc_feature complement(2690491..2690757)
+ /locus_tag="SARI_02778"
+ /note="Surface antigen variable number repeat; Region:
+ Surf_Ag_VNR; pfam07244"
+ /db_xref="CDD:219346"
+ misc_feature complement(2690248..2690484)
+ /locus_tag="SARI_02778"
+ /note="Surface antigen variable number repeat; Region:
+ Surf_Ag_VNR; pfam07244"
+ /db_xref="CDD:219346"
+ misc_feature complement(2690017..2690241)
+ /locus_tag="SARI_02778"
+ /note="Surface antigen variable number repeat; Region:
+ Surf_Ag_VNR; pfam07244"
+ /db_xref="CDD:219346"
+ misc_feature complement(2688850..2689938)
+ /locus_tag="SARI_02778"
+ /note="Surface antigen; Region: Bac_surface_Ag; pfam01103"
+ /db_xref="CDD:216300"
+ gene complement(2691311..2692663)
+ /locus_tag="SARI_02779"
+ CDS complement(2691311..2692663)
+ /locus_tag="SARI_02779"
+ /inference="protein motif:HMMPfam:IPR001478"
+ /inference="protein motif:HMMPfam:IPR008915"
+ /inference="protein motif:HMMSmart:IPR001478"
+ /inference="protein motif:HMMTigr:IPR004387"
+ /inference="protein motif:ScanRegExp:IPR006025"
+ /inference="similar to AA sequence:REFSEQ:NP_459228.1"
+ /note="catalyzes the cleavage of RseA which activates the
+ sigmaE-mediated stress response"
+ /codon_start=1
+ /transl_table=11
+ /product="zinc metallopeptidase RseP"
+ /protein_id="YP_001571770.1"
+ /db_xref="GI:161504658"
+ /db_xref="InterPro:IPR001478"
+ /db_xref="InterPro:IPR004387"
+ /db_xref="InterPro:IPR006025"
+ /db_xref="InterPro:IPR008915"
+ /translation="MLSILWNLAAFIIALGVLITVHEFGHFWVARRCGVRVERFSIGF
+ GKALWRRTDRYGTEYVIALIPLGGYVKMLDERAEPVAPELRRHAFNNKTVGQRAAIIA
+ AGPVANFIFAIFAYWLVFIIGVPGVRPVVGEIMPNSIAAQAQITPGTELKAVDGIETP
+ DWDAVRLQLVSKIGNPQVTMSVAPFGSDQRQDKTLDLRHWAFEPDKQDPVSSLGIRPR
+ GPQIEPILSEVQANSAASKAGLQAGDRIVKVDGQPLTQWMKFVTFVRDNPGKPLALEI
+ ERQGSALSLTLTPDTKSVNGKAEGFAGVVPKIIPLPEEYKTIRQYGPFSAILEATDKT
+ WQLMKLTVSMLGKLITGDVKLNNLSGPISIAQGAGMSAEFGVIYYLMFLALISVNLGI
+ INLFPLPVLDGGHLLFLAIEKLKGGPVSERVQDFSYRIGSILLVLLMGLALFNDFSRL
+ "
+ misc_feature complement(2691314..2692660)
+ /locus_tag="SARI_02779"
+ /note="zinc metallopeptidase RseP; Provisional; Region:
+ PRK10779"
+ /db_xref="CDD:182723"
+ misc_feature complement(<2692310..2692642)
+ /locus_tag="SARI_02779"
+ /note="RseP-like Site-2 proteases (S2P), zinc
+ metalloproteases (MEROPS family M50A), cleave
+ transmembrane domains of substrate proteins, regulating
+ intramembrane proteolysis (RIP) of diverse signal
+ transduction mechanisms. In Escherichia coli, the S2P
+ homolog...; Region: S2P-M50_PDZ_RseP-like; cd06163"
+ /db_xref="CDD:100084"
+ misc_feature complement(order(2692586..2692588,2692595..2692600))
+ /locus_tag="SARI_02779"
+ /note="active site"
+ /db_xref="CDD:100084"
+ misc_feature complement(2692079..>2692261)
+ /locus_tag="SARI_02779"
+ /note="PDZ domain of bacterial and plant zinc
+ metalloprotases, presumably membrane-associated or
+ integral membrane proteases, which may be involved in
+ signalling and regulatory mechanisms. May be responsible
+ for substrate recognition and/or binding, as most PDZ...;
+ Region: PDZ_metalloprotease; cd00989"
+ /db_xref="CDD:238489"
+ misc_feature complement(2691797..2692033)
+ /locus_tag="SARI_02779"
+ /note="PDZ domain of bacterial and plant zinc
+ metalloprotases, presumably membrane-associated or
+ integral membrane proteases, which may be involved in
+ signalling and regulatory mechanisms. May be responsible
+ for substrate recognition and/or binding, as most PDZ...;
+ Region: PDZ_metalloprotease; cd00989"
+ /db_xref="CDD:238489"
+ misc_feature complement(order(2691869..2691874,2691881..2691886,
+ 2692013..2692015,2692019..2692030))
+ /locus_tag="SARI_02779"
+ /note="protein binding site [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238489"
+ misc_feature complement(2691317..>2691574)
+ /locus_tag="SARI_02779"
+ /note="RseP-like Site-2 proteases (S2P), zinc
+ metalloproteases (MEROPS family M50A), cleave
+ transmembrane domains of substrate proteins, regulating
+ intramembrane proteolysis (RIP) of diverse signal
+ transduction mechanisms. In Escherichia coli, the S2P
+ homolog...; Region: S2P-M50_PDZ_RseP-like; cd06163"
+ /db_xref="CDD:100084"
+ misc_feature complement(2691473..2691484)
+ /locus_tag="SARI_02779"
+ /note="putative substrate binding region [chemical
+ binding]; other site"
+ /db_xref="CDD:100084"
+ gene complement(2692675..2693538)
+ /gene="cdsA"
+ /locus_tag="SARI_02780"
+ CDS complement(2692675..2693538)
+ /gene="cdsA"
+ /locus_tag="SARI_02780"
+ /inference="protein motif:HMMPfam:IPR000374"
+ /inference="protein motif:ScanRegExp:IPR000374"
+ /inference="similar to AA sequence:INSD:CAD08680.1"
+ /note="catalyzes the synthesis of CDP-diglyceride from CTP
+ and phosphatidate"
+ /codon_start=1
+ /transl_table=11
+ /product="CDP-diglyceride synthase"
+ /protein_id="YP_001571771.1"
+ /db_xref="GI:161504659"
+ /db_xref="InterPro:IPR000374"
+ /translation="MLLLKYRLISAFVLIPAVIAALFLLPPVGFAIITLVVCMLAAWE
+ WGQLSGFAARSQRVWLAVLCGLLLALMLFLLPEYHHNIRQPLVEMSLWASLGWWVVAL
+ LLVLFYPGSAAIWRNSKTLRLIFGLLTIVPFFWGMLALRAWHYDENHYSGAIWLLYVM
+ ILVWGADSGAYMFGKLFGKHKLAPKVSPGKTWQGFIGGLATAALISWGYGMWANLNVA
+ PVILLICSVVAALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDSLTAAVPVF
+ ACLSLLVFRTL"
+ misc_feature complement(2692678..2693532)
+ /gene="cdsA"
+ /locus_tag="SARI_02780"
+ /note="CDP-diglyceride synthase; Provisional; Region:
+ cdsA; PRK11624"
+ /db_xref="CDD:183240"
+ misc_feature complement(2692690..2693529)
+ /gene="cdsA"
+ /locus_tag="SARI_02780"
+ /note="CDP-diglyceride synthetase [Lipid metabolism];
+ Region: CdsA; COG0575"
+ /db_xref="CDD:223648"
+ gene complement(2693545..2694234)
+ /locus_tag="SARI_02781"
+ CDS complement(2693545..2694234)
+ /locus_tag="SARI_02781"
+ /inference="protein motif:BlastProDom:IPR001441"
+ /inference="protein motif:Gene3D:IPR001441"
+ /inference="protein motif:HMMPanther:IPR001441"
+ /inference="protein motif:HMMPfam:IPR001441"
+ /inference="protein motif:HMMTigr:IPR001441"
+ /inference="protein motif:ScanRegExp:IPR001441"
+ /inference="protein motif:superfamily:IPR001441"
+ /inference="similar to AA sequence:INSD:AAX64127.1"
+ /note="catalyzes the formation of undecaprenyl
+ pyrophosphate from isopentenyl pyrophosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="undecaprenyl pyrophosphate synthase"
+ /protein_id="YP_001571772.1"
+ /db_xref="GI:161504660"
+ /db_xref="InterPro:IPR001441"
+ /translation="MDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLY
+ AFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDISRFNSRLQERIRK
+ SEALTARNTGLTLNIAANYGGRWDIVQGVRQLAEQVQAGVLRPDQIDEERLGQQICMH
+ ELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRERR
+ FGGTEPGDDKA"
+ misc_feature complement(2693569..2694234)
+ /locus_tag="SARI_02781"
+ /note="Undecaprenyl pyrophosphate synthase [Lipid
+ metabolism]; Region: UppS; COG0020"
+ /db_xref="CDD:223099"
+ misc_feature complement(2693593..2694234)
+ /locus_tag="SARI_02781"
+ /note="Cis (Z)-Isoprenyl Diphosphate Synthases (cis-IPPS);
+ homodimers which catalyze the successive 1'-4
+ condensation of the isopentenyl diphosphate (IPP) molecule
+ to trans,trans-farnesyl diphosphate (FPP) or to
+ cis,trans-FPP to form long-chain polyprenyl...; Region:
+ CIS_IPPS; cd00475"
+ /db_xref="CDD:238265"
+ misc_feature complement(2694229..2694231)
+ /locus_tag="SARI_02781"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:238265"
+ misc_feature complement(2694217..2694228)
+ /locus_tag="SARI_02781"
+ /note="putative FPP diphosphate binding site; other site"
+ /db_xref="CDD:238265"
+ misc_feature complement(order(2693884..2693886,2693890..2693892,
+ 2693935..2693937,2693956..2693958,2694037..2694045,
+ 2694049..2694054,2694094..2694108))
+ /locus_tag="SARI_02781"
+ /note="putative FPP binding hydrophobic cleft; other site"
+ /db_xref="CDD:238265"
+ misc_feature complement(order(2693665..2693667,2693677..2693679,
+ 2693686..2693688,2693698..2693700,2693707..2693712,
+ 2693791..2693793,2693818..2693820,2693827..2693829,
+ 2693839..2693841,2693863..2693865))
+ /locus_tag="SARI_02781"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238265"
+ misc_feature complement(order(2693707..2693709,2693725..2693727))
+ /locus_tag="SARI_02781"
+ /note="putative IPP diphosphate binding site; other site"
+ /db_xref="CDD:238265"
+ gene complement(2694616..2695812)
+ /locus_tag="SARI_02782"
+ CDS complement(2694616..2695812)
+ /locus_tag="SARI_02782"
+ /inference="protein motif:HMMPfam:IPR013512"
+ /inference="protein motif:HMMPfam:IPR013644"
+ /inference="protein motif:HMMPIR:IPR003821"
+ /inference="protein motif:HMMTigr:IPR003821"
+ /inference="similar to AA sequence:REFSEQ:NP_454827.1"
+ /note="catalyzes the NADP-dependent rearrangement and
+ reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to
+ 2-C-methyl-D-erythritol 4-phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="1-deoxy-D-xylulose 5-phosphate reductoisomerase"
+ /protein_id="YP_001571773.1"
+ /db_xref="GI:161504661"
+ /db_xref="InterPro:IPR003821"
+ /db_xref="InterPro:IPR013512"
+ /db_xref="InterPro:IPR013644"
+ /translation="MKQLTILGSTGSIGCSTLDVVRHNPDSFRVVALVAGKNVARMAE
+ QCLEFSPRYAVMDDMPGAQQLKIMLQQHGCRTEVLSGQQAACEMAALDEVGHVMAAIV
+ GAAGLLPTLAAIRAGKTILLANKESLVTCGRLFMDEVKRSNARLLPVDSEHNAIFQSL
+ PQSIQHNLGYADLEQNGVTSILLTGSGGPFREMPMCDLAAMTPDQACRHPNWSMGRKI
+ SVDSATMMNKGLEYIEARWLFNASARQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDM
+ RTPIAHTMAWPNRVASGTQPLDFCKLSALTFSAPDYQRYPCLKLAMEAFEQGQAATTA
+ LNAANEITVAAFLAQQIRFTDIAGLNLAVLERMDLHEPASVDDVLQVDAIAREVARKQ
+ VIRLSR"
+ misc_feature complement(2694619..2695812)
+ /locus_tag="SARI_02782"
+ /note="1-deoxy-D-xylulose 5-phosphate reductoisomerase;
+ Provisional; Region: PRK05447"
+ /db_xref="CDD:235472"
+ misc_feature complement(2695417..2695803)
+ /locus_tag="SARI_02782"
+ /note="1-deoxy-D-xylulose 5-phosphate reductoisomerase;
+ Region: DXP_reductoisom; pfam02670"
+ /db_xref="CDD:217176"
+ misc_feature complement(2695096..2695377)
+ /locus_tag="SARI_02782"
+ /note="1-deoxy-D-xylulose 5-phosphate reductoisomerase
+ C-terminal; Region: DXP_redisom_C; pfam08436"
+ /db_xref="CDD:203943"
+ misc_feature complement(2694646..2694999)
+ /locus_tag="SARI_02782"
+ /note="DXP reductoisomerase C-terminal domain; Region:
+ DXPR_C; pfam13288"
+ /db_xref="CDD:222027"
+ gene complement(2695953..2696510)
+ /gene="frr"
+ /locus_tag="SARI_02783"
+ CDS complement(2695953..2696510)
+ /gene="frr"
+ /locus_tag="SARI_02783"
+ /inference="protein motif:BlastProDom:IPR002661"
+ /inference="protein motif:HMMPanther:IPR002661"
+ /inference="protein motif:HMMPfam:IPR002661"
+ /inference="protein motif:HMMTigr:IPR002661"
+ /inference="similar to AA sequence:INSD:AAL19183.1"
+ /note="Rrf; Frr; ribosome-recycling factor; release factor
+ 4; RF4; recycles ribosomes upon translation termination
+ along with release factor RF-3 and elongation factor EF-G;
+ A GTPase-dependent process results in release of 50S from
+ 70S; inhibited by release factor RF-1; essential for
+ viability; structurally similar to tRNAs"
+ /codon_start=1
+ /transl_table=11
+ /product="ribosome recycling factor"
+ /protein_id="YP_001571774.1"
+ /db_xref="GI:161504662"
+ /db_xref="InterPro:IPR002661"
+ /translation="MISDIRKDAEVRMEKCVEAFKTQISKVRTGRASPSLLDGIVVEY
+ YGTPTPLRQLASVTVEDSRTLKINVFDRSMGPAVEKAIMASDLGLNPSSAGTDIRVPL
+ PPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKAISEDDDRRSQEEV
+ QKMTDAAIKKVDAALADKEAELMQF"
+ misc_feature complement(2695956..2696510)
+ /gene="frr"
+ /locus_tag="SARI_02783"
+ /note="ribosome recycling factor; Reviewed; Region: frr;
+ PRK00083"
+ /db_xref="CDD:178850"
+ misc_feature complement(2695962..2696498)
+ /gene="frr"
+ /locus_tag="SARI_02783"
+ /note="Ribosome recycling factor (RRF). Ribosome recycling
+ factor dissociates the posttermination complex, composed
+ of the ribosome, deacylated tRNA, and mRNA, after
+ termination of translation. Thus ribosomes are
+ "recycled" and ready for another...; Region:
+ RRF; cd00520"
+ /db_xref="CDD:238288"
+ misc_feature complement(order(2696196..2696207,2696415..2696426))
+ /gene="frr"
+ /locus_tag="SARI_02783"
+ /note="hinge region; other site"
+ /db_xref="CDD:238288"
+ gene complement(2696659..2696814)
+ /locus_tag="SARI_02784"
+ CDS complement(2696659..2696814)
+ /locus_tag="SARI_02784"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571775.1"
+ /db_xref="GI:161504663"
+ /translation="MSLTKGSLQLFKFVPDEFVTQLPRDSAYSLALPGSAQALFKTLK
+ RFVIQLE"
+ gene complement(2696919..2697644)
+ /gene="pyrH"
+ /locus_tag="SARI_02785"
+ CDS complement(2696919..2697644)
+ /gene="pyrH"
+ /locus_tag="SARI_02785"
+ /inference="protein motif:Gene3D:IPR001048"
+ /inference="protein motif:HMMPfam:IPR001048"
+ /inference="protein motif:HMMPIR:IPR011817"
+ /inference="protein motif:HMMTigr:IPR011817"
+ /inference="protein motif:superfamily:IPR001048"
+ /inference="similar to AA sequence:INSD:CAD08676.1"
+ /note="Catalyzes the phosphorylation of UMP to UDP"
+ /codon_start=1
+ /transl_table=11
+ /product="uridylate kinase"
+ /protein_id="YP_001571776.1"
+ /db_xref="GI:161504664"
+ /db_xref="InterPro:IPR001048"
+ /db_xref="InterPro:IPR011817"
+ /translation="MATNAKPVYKRILLKLSGEALQGTEGFGIDASILDRMAQEIKEL
+ VELGIQVGVVIGGGNLFRGAGLAKAGMNRVVGDHMGMLATVMNGLAMRDALHRAYVNA
+ RLMSAIPLNGVCDNYSWAEAISLLRNNRVVILSAGTGNPFFTTDSAACLRGIEIEADV
+ VLKATKVDGVFTADPAKDPSATMYDQLTYSEVLDKELKVMDLAAFTLARDHKLPIRVF
+ NMNKPGALRRVVMGEKEGTLITE"
+ misc_feature complement(2696925..2697617)
+ /gene="pyrH"
+ /locus_tag="SARI_02785"
+ /note="UMP kinase (UMPK)-Ec, the microbial/chloroplast
+ uridine monophosphate kinase (uridylate kinase) enzyme
+ that catalyzes UMP phosphorylation and plays a key role in
+ pyrimidine nucleotide biosynthesis; regulation of this
+ process is via feed-back control and...; Region:
+ AAK_UMPK-PyrH-Ec; cd04254"
+ /db_xref="CDD:239787"
+ misc_feature complement(order(2697123..2697128,2697132..2697134,
+ 2697138..2697140,2697147..2697152,2697207..2697212,
+ 2697471..2697479,2697588..2697593,2697600..2697602))
+ /gene="pyrH"
+ /locus_tag="SARI_02785"
+ /note="putative nucleotide binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:239787"
+ misc_feature complement(order(2697210..2697218,2697222..2697227,
+ 2697231..2697233,2697402..2697407,2697414..2697416,
+ 2697456..2697461,2697471..2697479))
+ /gene="pyrH"
+ /locus_tag="SARI_02785"
+ /note="uridine monophosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:239787"
+ misc_feature complement(order(2697012..2697014,2697180..2697185,
+ 2697192..2697194,2697219..2697227,2697231..2697233,
+ 2697255..2697257,2697273..2697275,2697282..2697284,
+ 2697294..2697296,2697336..2697338,2697366..2697368,
+ 2697387..2697389,2697408..2697413,2697435..2697440))
+ /gene="pyrH"
+ /locus_tag="SARI_02785"
+ /note="homohexameric interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:239787"
+ gene complement(2697790..2698686)
+ /gene="tsf"
+ /locus_tag="SARI_02786"
+ CDS complement(2697790..2698686)
+ /gene="tsf"
+ /locus_tag="SARI_02786"
+ /inference="protein motif:HMMPanther:IPR001816"
+ /inference="protein motif:HMMPfam:IPR000449"
+ /inference="protein motif:HMMPfam:IPR001816"
+ /inference="protein motif:HMMTigr:IPR001816"
+ /inference="protein motif:ScanRegExp:IPR001816"
+ /inference="protein motif:superfamily:IPR001816"
+ /inference="protein motif:superfamily:IPR009060"
+ /inference="similar to AA sequence:REFSEQ:YP_215204.1"
+ /note="EF-Ts; functions during elongation stage of protein
+ translation; forms a dimer; associates with EF-Tu-GDP
+ complex and promotes exchange of GDP to GTP resulting in
+ regeneration of the active form of EF-Tu"
+ /codon_start=1
+ /transl_table=11
+ /product="elongation factor Ts"
+ /protein_id="YP_001571777.1"
+ /db_xref="GI:161504665"
+ /db_xref="InterPro:IPR000449"
+ /db_xref="InterPro:IPR001816"
+ /db_xref="InterPro:IPR009060"
+ /translation="MRFDAGQIKSFEDLRMAEITASLVKELRERTGAGMMDCKKALTE
+ ANGDIELAIENMRKSGAIKAAKKAGNVAADGVIKTKIDGNIAFILEINCQTDFVAKDA
+ GFQAFADKVLDAAVAGKITDVEVLKAQFEEERVALVAKIGENINIRRVASLEGEVLGS
+ YQHGARIGVLVAAKGADEELVKQLAMHVAASKPEFVKPEDVSADVVEKEYQVQLDIAM
+ QSGKPKEIAEKMVEGRMKKFTGEVSLTGQPFVMEPSKSVGQLLKEHNADVTGFIRFEV
+ GEGIEKVETDFAAEVAAMSRQS"
+ misc_feature complement(2697805..2698641)
+ /gene="tsf"
+ /locus_tag="SARI_02786"
+ /note="elongation factor Ts; Provisional; Region: tsf;
+ PRK09377"
+ /db_xref="CDD:236491"
+ misc_feature complement(2698525..2698632)
+ /gene="tsf"
+ /locus_tag="SARI_02786"
+ /note="UBA/TS-N domain; Region: UBA; pfam00627"
+ /db_xref="CDD:201355"
+ misc_feature complement(<2698354..2698461)
+ /gene="tsf"
+ /locus_tag="SARI_02786"
+ /note="Elongation factor TS; Region: EF_TS; pfam00889"
+ /db_xref="CDD:189759"
+ misc_feature complement(2697853..2698227)
+ /gene="tsf"
+ /locus_tag="SARI_02786"
+ /note="Elongation factor TS; Region: EF_TS; pfam00889"
+ /db_xref="CDD:189759"
+ gene complement(2698901..2699626)
+ /gene="rpsB"
+ /locus_tag="SARI_02787"
+ CDS complement(2698901..2699626)
+ /gene="rpsB"
+ /locus_tag="SARI_02787"
+ /inference="protein motif:Gene3D:IPR001865"
+ /inference="protein motif:HMMPanther:IPR005706"
+ /inference="protein motif:HMMPfam:IPR001865"
+ /inference="protein motif:HMMTigr:IPR005706"
+ /inference="protein motif:ScanRegExp:IPR001865"
+ /inference="protein motif:superfamily:IPR001865"
+ /inference="similar to AA sequence:INSD:AAL19180.1"
+ /note="one of the last subunits in the assembly of the 30S
+ subunit; absence of S2 does not inhibit assembly but
+ results in an inactive subunit"
+ /codon_start=1
+ /transl_table=11
+ /product="30S ribosomal protein S2"
+ /protein_id="YP_001571778.1"
+ /db_xref="GI:161504666"
+ /db_xref="InterPro:IPR001865"
+ /db_xref="InterPro:IPR005706"
+ /translation="MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLE
+ KTVPMFNEALAELNKISARKGKILFVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLT
+ NWKTVRQSIKRLKDLETQSQDGTFEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDA
+ LFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVSLYLGAVA
+ ATVREGRSQDLASQAEESFVEAE"
+ misc_feature complement(2698958..2699602)
+ /gene="rpsB"
+ /locus_tag="SARI_02787"
+ /note="Ribosomal protein S2 (RPS2), involved in formation
+ of the translation initiation complex, where it might
+ contact the messenger RNA and several components of the
+ ribosome. It has been shown that in Escherichia coli RPS2
+ is essential for the binding of...; Region: RPS2; cd01425"
+ /db_xref="CDD:100106"
+ misc_feature complement(order(2699093..2699095,2699102..2699104,
+ 2699318..2699323,2699330..2699338,2699342..2699344,
+ 2699516..2699524,2699549..2699554))
+ /gene="rpsB"
+ /locus_tag="SARI_02787"
+ /note="rRNA interaction site [nucleotide binding]; other
+ site"
+ /db_xref="CDD:100106"
+ misc_feature complement(order(2699036..2699047,2699087..2699089,
+ 2699093..2699098))
+ /gene="rpsB"
+ /locus_tag="SARI_02787"
+ /note="S8 interaction site; other site"
+ /db_xref="CDD:100106"
+ misc_feature complement(2698976..2698993)
+ /gene="rpsB"
+ /locus_tag="SARI_02787"
+ /note="putative laminin-1 binding site; other site"
+ /db_xref="CDD:100106"
+ gene complement(2699655..2699792)
+ /locus_tag="SARI_02788"
+ misc_RNA complement(2699655..2699792)
+ /locus_tag="SARI_02788"
+ /product="t44 RNA"
+ /inference="nucleotide motif:Rfam:RF00127"
+ /note="Rfam score 127.5"
+ gene 2699950..2700744
+ /locus_tag="SARI_02789"
+ CDS 2699950..2700744
+ /locus_tag="SARI_02789"
+ /inference="protein motif:Gene3D:IPR000994"
+ /inference="protein motif:HMMPanther:IPR000994"
+ /inference="protein motif:HMMPfam:IPR000994"
+ /inference="protein motif:HMMTigr:IPR002467"
+ /inference="protein motif:ScanRegExp:IPR002467"
+ /inference="similar to AA sequence:INSD:AAL19179.1"
+ /note="'catalyzes the removal of N-terminal amino acids
+ from peptides and arylamides; generally Co(II) however
+ activity has been shown for some methionine
+ aminopeptidases with Zn, Fe, or Mn'"
+ /codon_start=1
+ /transl_table=11
+ /product="methionine aminopeptidase"
+ /protein_id="YP_001571779.1"
+ /db_xref="GI:161504667"
+ /db_xref="InterPro:IPR000994"
+ /db_xref="InterPro:IPR002467"
+ /translation="MAISIKTPEEIEKMRIAGRLAAEVLEMIEPYIKPGVTTGELDRI
+ CNDYIVNEQHAISACLGYHGYPKSVCISINEVVCHGIPDDAKHLKDGDIVNIDVTVIK
+ DEYHGDTSKMFIVGKPTILGERLCRVTQESLYLGIKMVKPGIRLRTIGAAIQKYAEGE
+ GFSVVREYCGHGIGRGFHEEPQVLHYDADDGGVVLQPGMTFTIEPMLNAGDYRIRIMK
+ DGWTVKTKDRSLSAQYEHTIVVTENGCEILTLRKDDTIPAIITHDA"
+ misc_feature 2699980..2700699
+ /locus_tag="SARI_02789"
+ /note="Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also
+ known as methionyl aminopeptidase and Peptidase M.
+ Catalyzes release of N-terminal amino acids,
+ preferentially methionine, from peptides and arylamides;
+ Region: MetAP1; cd01086"
+ /db_xref="CDD:238519"
+ misc_feature order(2700184..2700186,2700238..2700240,2700271..2700273,
+ 2700460..2700462,2700559..2700561,2700652..2700654)
+ /locus_tag="SARI_02789"
+ /note="active site"
+ /db_xref="CDD:238519"
+ gene 2700852..2703524
+ /locus_tag="SARI_02790"
+ CDS 2700852..2703524
+ /locus_tag="SARI_02790"
+ /inference="protein motif:HMMPfam:IPR002912"
+ /inference="protein motif:HMMPfam:IPR002934"
+ /inference="protein motif:HMMPfam:IPR006674"
+ /inference="protein motif:HMMPfam:IPR013546"
+ /inference="protein motif:HMMSmart:IPR003607"
+ /inference="protein motif:HMMTigr:IPR010043"
+ /note="catalyzes the uridylylation or deuridylylation of
+ the PII nitrogen regulatory protein"
+ /codon_start=1
+ /transl_table=11
+ /product="PII uridylyl-transferase"
+ /protein_id="YP_001571780.1"
+ /db_xref="GI:161504668"
+ /db_xref="InterPro:IPR002912"
+ /db_xref="InterPro:IPR002934"
+ /db_xref="InterPro:IPR003607"
+ /db_xref="InterPro:IPR006674"
+ /db_xref="InterPro:IPR010043"
+ /db_xref="InterPro:IPR013546"
+ /translation="MNTLPEQYANTALPTLPNQPQNPGVWPRAELTVAGIKARIDIFQ
+ HWLGEAFDSGICAEQLIEARTEFIDQLLQRLWIEAGFGQIADLALVAVGGYGRGELHP
+ LSDIDLLILSRKNLPDEQAQKVGELLTLLWDIKLDVGHSVRTLEECLLEGLSDLTVAT
+ NLIETRLLIGDVALFLALQKHIFSEGFWPSDKFYAAKVEEQNQRHQRYHGTSYNLEPD
+ IKSSPGGLRDIHTLQWVARRHFGATSLDEMVGFGFLTPAERAELNECLHILWRIRFAL
+ HLVLSRYDNRLLFDRQLSVAQRLNYSGEGNDPVERMMKDYFRVTRRVSELNQMLLQLF
+ DEAILALPADEKPRPIDDEFQLRGTLIDLRDETLFIREPEAILRMFYMMVRNSAITGI
+ YSTTLRHLRHARRHLSQPLCYIPEARTLFLSMLRHPGAVSRGLLPMHRHSVLWAYMPQ
+ WSHIVGQMQFDLFHAYTVDEHTIRVMLKLESFAKEETRQRHPLCVDLWPRLPHPELIL
+ IAALFHDIAKGRGGDHSVLGAQDVLTFAELHGLNSRETQLVAWLVRQHLLMSVTAQRR
+ DIQDPEVIKQFAEEVQTETRLRFLVCLTVADICATNETLWNSWKQSLLRELYFATEKQ
+ LRRGMQNTPDMRERVRHHQLQALALLRMDNIDEAVLHKIWTRCRANYFVRHSPNQLAW
+ HARHLLQHDLRQPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQI
+ FTTRDGMAMDTFIVLEPDGSPLAPDRHEVIRASLEQTITQRSWQPPQPRRQPAKLRHF
+ TVETEVNFLPTHTDRKSFLELIALDQPGLLARVGQIFADLGISLHGARITTIGERVED
+ LFIIATADRRALNNVLQLEVQQRLTAALNPNDKG"
+ misc_feature 2700870..2703521
+ /locus_tag="SARI_02790"
+ /note="PII uridylyl-transferase; Provisional; Region:
+ PRK05007"
+ /db_xref="CDD:235329"
+ misc_feature 2700990..2701400
+ /locus_tag="SARI_02790"
+ /note="Nucleotidyltransferase (NT) domain of Escherichia
+ coli adenylyltransferase (GlnE), Escherichia coli uridylyl
+ transferase (GlnD), and similar proteins; Region:
+ NT_GlnE_GlnD_like; cd05401"
+ /db_xref="CDD:143391"
+ misc_feature order(2701164..2701166,2701170..2701172,2701248..2701250)
+ /locus_tag="SARI_02790"
+ /note="metal binding triad; other site"
+ /db_xref="CDD:143391"
+ misc_feature 2701425..2701844
+ /locus_tag="SARI_02790"
+ /note="GlnD PII-uridylyltransferase; Region:
+ GlnD_UR_UTase; pfam08335"
+ /db_xref="CDD:219800"
+ misc_feature 2702247..2702705
+ /locus_tag="SARI_02790"
+ /note="Metal dependent phosphohydrolases with conserved
+ 'HD' motif; Region: HDc; cd00077"
+ /db_xref="CDD:238032"
+ misc_feature order(2702262..2702264,2702391..2702396,2702640..2702642)
+ /locus_tag="SARI_02790"
+ /note="Zn2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238032"
+ misc_feature 2702394..2702396
+ /locus_tag="SARI_02790"
+ /note="Mg2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238032"
+ misc_feature 2702970..2703185
+ /locus_tag="SARI_02790"
+ /note="ACT domain family, ACT_UUR-like_1, includes the
+ first of two C-terminal ACT domains of the bacterial
+ signal-transducing uridylyltransferase /uridylyl-removing
+ (UUR) enzyme, GlnD and related domains; Region:
+ ACT_UUR-like_1; cd04900"
+ /db_xref="CDD:153172"
+ misc_feature 2703300..2703503
+ /locus_tag="SARI_02790"
+ /note="C-terminal ACT domains of the bacterial
+ signal-transducing uridylyltransferase /uridylyl-removing
+ (UUR) enzyme, GlnD and related domains; Region:
+ ACT_ACR-UUR-like_2; cd04899"
+ /db_xref="CDD:153171"
+ gene 2703554..2704378
+ /gene="dapD"
+ /locus_tag="SARI_02791"
+ CDS 2703554..2704378
+ /gene="dapD"
+ /locus_tag="SARI_02791"
+ /inference="protein motif:HMMTigr:IPR005664"
+ /inference="protein motif:ScanRegExp:IPR001451"
+ /inference="protein motif:superfamily:IPR011004"
+ /inference="similar to AA sequence:SwissProt:Q8ZRP4"
+ /note="catalyzes the formation of
+ N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and
+ tetrahydrodipicolinate in the lysine biosynthetic pathway"
+ /codon_start=1
+ /transl_table=11
+ /product="2,3,4,5-tetrahydropyridine-2,6-carboxylate
+ N-succinyltransferase"
+ /protein_id="YP_001571781.1"
+ /db_xref="GI:161504669"
+ /db_xref="InterPro:IPR001451"
+ /db_xref="InterPro:IPR005664"
+ /db_xref="InterPro:IPR011004"
+ /translation="MQQLQNVIETAFERRADITPANVDTVTREAVNQVISLLDSGALR
+ VAEKIDGQWVTHQWLKKAVLLSFRINDNQVIDGAESRYFDKVPMKFADYDEARFQKEG
+ FRVVPPAAVRQGAFIARNTVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSG
+ GVGIGGVLEPLQANPTIIEDNCFIGARSEVVEGVIVEEGSVISMGVYLGQSTKIYDRE
+ TGEVHYGRVPAGSVVVSGNLPSKDGKYSLYCAVIVKKVDAKTRGKVGINELLRTID"
+ misc_feature 2703554..2704366
+ /gene="dapD"
+ /locus_tag="SARI_02791"
+ /note="2,3,4,5-tetrahydropyridine-2,6-carboxylate
+ N-succinyltransferase; Provisional; Region: dapD;
+ PRK11830"
+ /db_xref="CDD:236996"
+ misc_feature 2703857..2704270
+ /gene="dapD"
+ /locus_tag="SARI_02791"
+ /note="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate (THDP)
+ N-succinyltransferase (also called THP
+ succinyltransferase): THDP N-succinyltransferase catalyzes
+ the conversion of tetrahydrodipicolinate and succinyl-CoA
+ to N-succinyltetrahydrodipicolinate and CoA; Region:
+ LbH_THP_succinylT; cd03350"
+ /db_xref="CDD:100041"
+ misc_feature order(2703863..2703868,2703875..2703880,2703926..2703928,
+ 2703932..2703934,2703980..2703988,2704034..2704036,
+ 2704112..2704114,2704118..2704120,2704172..2704174,
+ 2704253..2704264,2704268..2704270)
+ /gene="dapD"
+ /locus_tag="SARI_02791"
+ /note="trimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:100041"
+ misc_feature order(2703863..2703865,2703887..2703889,2703923..2703925,
+ 2703938..2703940,2703974..2703976,2703995..2703997,
+ 2704022..2704024,2704028..2704030,2704049..2704051,
+ 2704055..2704060,2704067..2704069,2704106..2704114,
+ 2704127..2704129,2704160..2704165)
+ /gene="dapD"
+ /locus_tag="SARI_02791"
+ /note="active site"
+ /db_xref="CDD:100041"
+ misc_feature order(2703863..2703865,2703887..2703889,2703923..2703925,
+ 2703938..2703940,2703974..2703976,2703995..2703997,
+ 2704055..2704057)
+ /gene="dapD"
+ /locus_tag="SARI_02791"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:100041"
+ misc_feature order(2704028..2704033,2704049..2704051,2704067..2704069,
+ 2704106..2704114,2704127..2704129,2704160..2704165)
+ /gene="dapD"
+ /locus_tag="SARI_02791"
+ /note="CoA binding site [chemical binding]; other site"
+ /db_xref="CDD:100041"
+ gene complement(2704415..2705716)
+ /locus_tag="SARI_02792"
+ CDS complement(2704415..2705716)
+ /locus_tag="SARI_02792"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="similar to AA sequence:REFSEQ:YP_215199.1"
+ /note="'COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571782.1"
+ /db_xref="GI:161504670"
+ /db_xref="InterPro:IPR011701"
+ /translation="MSGTYNATIRRVVISAWIGNSIEYYDFLLYGLASALVFSPLFFP
+ GASPFTATLSSFASFGVGFISRPLGALFFGNRGDTLGRKNTLLITLGGMGTVTFLIGC
+ LPSYASIGALAPVLLVILRFLQGFLVGGEWGGAMLMVVEYASGKHRGRLSALSQTGGL
+ TGQLLATGVFIFVTKLPEEELLSWGWRIPFLLSALLVLPGLYMRHRLDETPVFRAFKK
+ QQAINNMQHKEKRPVVKVVREQWRSILLIMILRFAESVSFFLATVFTVSWATTQLGIA
+ SLTILYVVMITCLLAYPMHLLFGIVSDRTGCRQVYIFGALFVAAMAFPFFWLLESRSL
+ ILMIVGYVLFINIGHNSLNAVQPSFFAGLFHPPVRYSGSSIGAQLGAVVAGGFTPFIA
+ KTLSAVYDNSWTWVAGYVVLTALASAFAAKIAPETVLPHSP"
+ misc_feature complement(2704454..2705689)
+ /locus_tag="SARI_02792"
+ /note="shikimate transporter; Provisional; Region:
+ PRK09952"
+ /db_xref="CDD:182163"
+ misc_feature complement(2704460..2705638)
+ /locus_tag="SARI_02792"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature complement(order(2704574..2704576,2704583..2704588,
+ 2704595..2704600,2704607..2704612,2704643..2704645,
+ 2704652..2704657,2704667..2704669,2704676..2704681,
+ 2704688..2704690,2704832..2704834,2704844..2704846,
+ 2704853..2704855,2704865..2704867,2704877..2704879,
+ 2704919..2704921,2704928..2704933,2704940..2704945,
+ 2704952..2704954,2705228..2705230,2705246..2705251,
+ 2705258..2705263,2705297..2705299,2705306..2705311,
+ 2705318..2705323,2705330..2705335,2705495..2705500,
+ 2705504..2705509,2705519..2705521,2705528..2705533,
+ 2705540..2705542,2705591..2705596,2705600..2705608,
+ 2705615..2705617))
+ /locus_tag="SARI_02792"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene 2705947..2706348
+ /locus_tag="SARI_02793"
+ CDS 2705947..2706348
+ /locus_tag="SARI_02793"
+ /inference="similar to AA sequence:INSD:CAD01365.1"
+ /note="'COG: NOG09673 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571783.1"
+ /db_xref="GI:161504671"
+ /translation="MKDTAMYDNLKSLGITNPEEIDRYSLRQEANNDILKIYFQKDRG
+ EFFAKSVKFKYPRQRKTVVADGVGQGYKEVQEISPNLRYVIDELDQICHRDRSELDLK
+ RKILDDLRHLESVVANKISEIESDLEKLTRK"
+ misc_feature 2705962..2706336
+ /locus_tag="SARI_02793"
+ /note="hypothetical protein; Provisional; Region:
+ PRK13677"
+ /db_xref="CDD:184234"
+ gene complement(2706427..2707638)
+ /locus_tag="SARI_02794"
+ CDS complement(2706427..2707638)
+ /locus_tag="SARI_02794"
+ /inference="protein motif:HMMPfam:IPR008599"
+ /inference="similar to AA sequence:REFSEQ:YP_149558.1"
+ /note="'regulates the expression of the operons for the
+ enzymes involved in galactarate, glucarate and glycerate
+ utilization'"
+ /codon_start=1
+ /transl_table=11
+ /product="carbohydrate diacid transcriptional activator
+ CdaR"
+ /protein_id="YP_001571784.1"
+ /db_xref="GI:161504672"
+ /db_xref="InterPro:IPR008599"
+ /translation="MSRPAIFLMLMLCSPEGFMAGWHLDTKMAQDIVARTMRIIDTNI
+ NVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDAAVARHLHGVRQGINLPLRL
+ EGEIVGVIGLTGEPEHLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQA
+ EENTPALVEWAQRLGIDLNQPRVAAVVEVDSGQLGVDSAMAELQQLQNALTTPERNNL
+ IAIVSLTEMVVLKPALNPFGRWDAEDHRKRVEQLIARMKENGQLRFRVALGNYFTGPG
+ SIARSYRTARTTMMVGKQRMPESRSYFYQDLMLPVLLDSLRGGWQANELARPLVKLKA
+ MDNNGLLRRTLTAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLL
+ LYVALQLDEQR"
+ misc_feature complement(2706430..2707584)
+ /locus_tag="SARI_02794"
+ /note="carbohydrate diacid transcriptional activator CdaR;
+ Provisional; Region: PRK11477"
+ /db_xref="CDD:183155"
+ misc_feature complement(2707165..2707569)
+ /locus_tag="SARI_02794"
+ /note="Putative sugar diacid recognition; Region:
+ Diacid_rec; pfam05651"
+ /db_xref="CDD:147680"
+ misc_feature complement(2706442..2706609)
+ /locus_tag="SARI_02794"
+ /note="PucR C-terminal helix-turn-helix domain; Region:
+ HTH_30; pfam13556"
+ /db_xref="CDD:205734"
+ gene complement(2707736..2709064)
+ /locus_tag="SARI_02795"
+ CDS complement(2707736..2709064)
+ /locus_tag="SARI_02795"
+ /inference="protein motif:HMMPfam:IPR001254"
+ /inference="protein motif:HMMPfam:IPR001478"
+ /inference="protein motif:HMMSmart:IPR001478"
+ /inference="protein motif:HMMTigr:IPR011782"
+ /inference="protein motif:superfamily:IPR001478"
+ /inference="protein motif:superfamily:IPR009003"
+ /inference="similar to AA sequence:INSD:AAL19173.1"
+ /note="protease Do; required at high temperature; degrades
+ damaged proteins"
+ /codon_start=1
+ /transl_table=11
+ /product="serine endoprotease"
+ /protein_id="YP_001571785.1"
+ /db_xref="GI:161504673"
+ /db_xref="InterPro:IPR001254"
+ /db_xref="InterPro:IPR001478"
+ /db_xref="InterPro:IPR009003"
+ /db_xref="InterPro:IPR011782"
+ /translation="MTAQQMPSLAPMLEKVMPSVVSINVEGSTMVNTPRMPRNFQQFF
+ GDDSPFCQDGSPFQNSPFCQGGGNGGNGGQQQKFMALGSGVIIDAAKGYVVTNNHVVD
+ NANVIKVQLSDGRKFDAKVVGKDPRSDIALIQIQNPKNLTAIKLADSDALRVGDYAVA
+ IGNPFGLGETVTSGIVSALGRSGLNVENYENFIQTDAAINRGNSGGALVNLNGELIGI
+ NTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNSELAKAMKV
+ DAQRGAFVSQVMPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKISLG
+ LLREGKAITVNLELQQSRQSQVDSSTIFSGIEGAEMSNKGQDKGVVVSSVKANSPAAQ
+ IGLKKGDVIIGANQQPVKNIAELRKILDSKPSVLALNIQRGDSSIYLLMQ"
+ misc_feature complement(2707739..2709064)
+ /locus_tag="SARI_02795"
+ /note="serine endoprotease; Provisional; Region: PRK10942"
+ /db_xref="CDD:236802"
+ misc_feature complement(2708411..2708821)
+ /locus_tag="SARI_02795"
+ /note="Trypsin-like peptidase domain; Region: Trypsin_2;
+ pfam13365"
+ /db_xref="CDD:222077"
+ misc_feature complement(2708027..2708290)
+ /locus_tag="SARI_02795"
+ /note="PDZ domain of tryspin-like serine proteases, such
+ as DegP/HtrA, which are oligomeric proteins involved in
+ heat-shock response, chaperone function, and apoptosis.
+ May be responsible for substrate recognition and/or
+ binding, as most PDZ domains bind...; Region:
+ PDZ_serine_protease; cd00987"
+ /db_xref="CDD:238487"
+ misc_feature complement(order(2708108..2708113,2708120..2708125,
+ 2708276..2708278,2708282..2708290))
+ /locus_tag="SARI_02795"
+ /note="protein binding site [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238487"
+ misc_feature complement(2707748..2707963)
+ /locus_tag="SARI_02795"
+ /note="PDZ domain of tryspin-like serine proteases, such
+ as DegP/HtrA, which are oligomeric proteins involved in
+ heat-shock response, chaperone function, and apoptosis.
+ May be responsible for substrate recognition and/or
+ binding, as most PDZ domains bind...; Region:
+ PDZ_serine_protease; cd00987"
+ /db_xref="CDD:238487"
+ gene complement(2709293..2710810)
+ /gene="dgt"
+ /locus_tag="SARI_02796"
+ CDS complement(2709293..2710810)
+ /gene="dgt"
+ /locus_tag="SARI_02796"
+ /inference="protein motif:HMMPfam:IPR006674"
+ /inference="protein motif:HMMSmart:IPR003607"
+ /inference="protein motif:HMMTigr:IPR006261"
+ /inference="similar to AA sequence:REFSEQ:NP_454816.1"
+ /note="forms a homotetramer; requires magnesium for
+ activity; catalyzes the hydrolysis of dGTP to form
+ deoxyguanosine and triphosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="deoxyguanosinetriphosphate triphosphohydrolase"
+ /protein_id="YP_001571786.1"
+ /db_xref="GI:161504674"
+ /db_xref="InterPro:IPR003607"
+ /db_xref="InterPro:IPR006261"
+ /db_xref="InterPro:IPR006674"
+ /translation="MASIDFRNKINWHRRYRSPQGVKTEHEILRIFESDRGRIINSPA
+ IRRLQQKTQVFPLERNAAVRTRLTHSMEVQQVGRYIAKEILSRLKAQNLLEEYGLDAL
+ TGPFESIVEMACLMHDIGNPPFGHFGEAAINDWFRQRLYPEDAESQPLTHDRCVVSSL
+ RLQEGEESLNDIRRKVRQDICYFEGNAQGIRLVHTLMRMNLTWAQVGGILKYTRPAWW
+ RGPVPDSHRYLMKKPGYYLSEEKYIARLRKELQLAPYSRFPLTWIMEAADDISYCVAD
+ LEDAVEKRIFSVEQLYHHLYHAWGHHEKDSLFELVVGNAWEKSRANTLSRSTEEQFFM
+ YLRVNTLNKLVPYAAQRFIDNLPQIFAGTFNQALLEDASGFSRLLELYKNVAVEHVFS
+ HPDVEQLELQGYRVISGLLDIYQPLLSMSLNDFSELVEKERLKRFPIESRLFQKLSTR
+ HRLAYVEVVSKLPMDSAEYPVLEYYYRCRLVQDYISGMTDLYAWDEYRRLMAVEQ"
+ misc_feature complement(2709299..2710810)
+ /gene="dgt"
+ /locus_tag="SARI_02796"
+ /note="deoxyguanosinetriphosphate triphosphohydrolase;
+ Provisional; Region: dgt; PRK04926"
+ /db_xref="CDD:235320"
+ misc_feature complement(<2710427..2710621)
+ /gene="dgt"
+ /locus_tag="SARI_02796"
+ /note="Metal dependent phosphohydrolases with conserved
+ 'HD' motif; Region: HDc; cd00077"
+ /db_xref="CDD:238032"
+ misc_feature complement(order(2710457..2710462,2710604..2710606))
+ /gene="dgt"
+ /locus_tag="SARI_02796"
+ /note="Zn2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238032"
+ misc_feature complement(2710457..2710459)
+ /gene="dgt"
+ /locus_tag="SARI_02796"
+ /note="Mg2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238032"
+ misc_feature complement(2709314..2709682)
+ /gene="dgt"
+ /locus_tag="SARI_02796"
+ /note="Phosphohydrolase-associated domain; Region:
+ HD_assoc; pfam13286"
+ /db_xref="CDD:222025"
+ gene 2710896..2711594
+ /locus_tag="SARI_02797"
+ CDS 2710896..2711594
+ /locus_tag="SARI_02797"
+ /inference="protein motif:HMMPfam:IPR000845"
+ /inference="protein motif:HMMTigr:IPR010049"
+ /inference="similar to AA sequence:SwissProt:P60216"
+ /note="enables the cleavage of the glycosidic bond in both
+ 5'-methylthioadenosine and S-adenosylhomocysteine"
+ /codon_start=1
+ /transl_table=11
+ /product="5'-methylthioadenosine/S-adenosylhomocysteine
+ nucleosidase"
+ /protein_id="YP_001571787.1"
+ /db_xref="GI:161504675"
+ /db_xref="InterPro:IPR000845"
+ /db_xref="InterPro:IPR010049"
+ /translation="MKIGIIGAMEEEVTLLRDKIENRQTLTLGGCEIYTGQLNGTDVA
+ LLKSGIGKVAAALGATLLLEHCKPDVIINTGSAGGLASTLKVGDIVVSDEARYHDADV
+ TAFGYEYGQLPGCPAGFKADDKLIAAAEYCIRELNLNAVRGLIVSGDAFINGSVGLAK
+ IRHNFPNAVAVEMEATAIAHVCYNFKVPFVVVRAISDVADQQSHLNFDEFLAVAAKQS
+ TLMVETLVQKLAHG"
+ misc_feature 2710896..2711585
+ /locus_tag="SARI_02797"
+ /note="5'-methylthioadenosine/S-adenosylhomocysteine
+ nucleosidase; Validated; Region: PRK05584"
+ /db_xref="CDD:180148"
+ misc_feature 2710899..2711582
+ /locus_tag="SARI_02797"
+ /note="5'-methylthioadenosine/S-adenosylhomocysteine
+ nucleosidase; Region: MTA/SAH-Nsdase; TIGR01704"
+ /db_xref="CDD:130765"
+ gene 2711587..2712387
+ /locus_tag="SARI_02798"
+ CDS 2711587..2712387
+ /locus_tag="SARI_02798"
+ /inference="protein motif:HMMPfam:IPR002491"
+ /inference="similar to AA sequence:INSD:AAL19170.1"
+ /note="solute binding component of the vitamin B12
+ transport system BtuCDF"
+ /codon_start=1
+ /transl_table=11
+ /product="vitamin B12-transporter protein BtuF"
+ /protein_id="YP_001571788.1"
+ /db_xref="GI:161504676"
+ /db_xref="InterPro:IPR002491"
+ /translation="MAKQMFRALVALLLTLPVWLYAAPRVITLSPANTELAFAAGITP
+ VGVSSYSDYPPEAQKIEQVSTWQGMNLERIVALKPDLVVAWRGGNAERQVNQLTSLGI
+ KVMWVDAVTIEQIADTLRQLAPWSPQPEKARQAAQRLLKEYAALKAEYASKAKKRVFL
+ QFGMNPLFTSGKGSIQHQVLTTCGGENVFADSRVPWPQVSREQVLTRHPQAIIVTGKA
+ DEILKIEQYWGNLLKTPVITLNSDWFERASPRIILAAKQLCNALSQVN"
+ misc_feature 2711656..2712384
+ /locus_tag="SARI_02798"
+ /note="vitamin B12-transporter protein BtuF; Provisional;
+ Region: PRK03379"
+ /db_xref="CDD:179575"
+ misc_feature 2711659..2712366
+ /locus_tag="SARI_02798"
+ /note="Cobalamin binding protein BtuF. These proteins
+ have been shown to function as initial receptors in ABC
+ transport of vitamin B12 (cobalamin) in eubacterial and
+ some archaeal species. They belong to the TroA
+ superfamily of helical backbone metal receptor...; Region:
+ BtuF; cd01144"
+ /db_xref="CDD:238564"
+ misc_feature order(2711677..2711682,2711734..2711736,2711839..2711841,
+ 2711845..2711847,2712088..2712090,2712172..2712174)
+ /locus_tag="SARI_02798"
+ /note="cobalamin binding residues [chemical binding];
+ other site"
+ /db_xref="CDD:238564"
+ misc_feature order(2711800..2711802,2712190..2712192)
+ /locus_tag="SARI_02798"
+ /note="putative BtuC binding residues; other site"
+ /db_xref="CDD:238564"
+ misc_feature order(2711842..2711844,2711869..2711871,2711878..2711880,
+ 2711896..2711898,2711908..2711910,2711917..2711919,
+ 2711923..2711928,2711935..2711937,2711944..2711949)
+ /locus_tag="SARI_02798"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238564"
+ gene 2712424..2713041
+ /locus_tag="SARI_02799"
+ CDS 2712424..2713041
+ /locus_tag="SARI_02799"
+ /inference="protein motif:HMMPfam:IPR005115"
+ /inference="similar to AA sequence:INSD:AAO67937.1"
+ /note="'COG: COG2860 Predicted membrane protein;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571789.1"
+ /db_xref="GI:161504677"
+ /db_xref="InterPro:IPR005115"
+ /translation="MLVYWLDIVGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGG
+ TIRDMALDNGPVFWVKDPTDLVVAMVTSMLTILLVRQPRRLPKWLLPVLDAVGLAVFV
+ GIGVNKAFLAETGPLVAVCMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIV
+ HATAFYTFSVPLESASMMGMVVTLFIRLAAIRWHLKLPTFALDEN"
+ misc_feature 2712424..2713038
+ /locus_tag="SARI_02799"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10578"
+ /db_xref="CDD:182564"
+ misc_feature 2712430..2712663
+ /locus_tag="SARI_02799"
+ /note="UPF0126 domain; Region: UPF0126; pfam03458"
+ /db_xref="CDD:217571"
+ misc_feature 2712691..2712903
+ /locus_tag="SARI_02799"
+ /note="UPF0126 domain; Region: UPF0126; pfam03458"
+ /db_xref="CDD:217571"
+ gene complement(2713160..2713504)
+ /locus_tag="SARI_02800"
+ CDS complement(2713160..2713504)
+ /locus_tag="SARI_02800"
+ /inference="protein motif:BlastProDom:IPR000361"
+ /inference="protein motif:HMMPanther:IPR000361"
+ /inference="protein motif:HMMPfam:IPR000361"
+ /inference="protein motif:HMMTigr:IPR000361"
+ /inference="protein motif:ScanRegExp:IPR000361"
+ /inference="similar to AA sequence:INSD:AAL19168.1"
+ /note="essential respiratory protein A; may be involved in
+ the transfer of iron-sulfur clusters; essential for growth
+ using oxygen or alternate electron acceptors"
+ /codon_start=1
+ /transl_table=11
+ /product="iron-sulfur cluster insertion protein ErpA"
+ /protein_id="YP_001571790.1"
+ /db_xref="GI:161504678"
+ /db_xref="InterPro:IPR000361"
+ /translation="MSDDVALPLQFTDAAANKVKSLIADEDNPNLKLRVYITGGGCSG
+ FQYGFTFDDQVNEGDMTIEKQGVGLVVDPMSLQYLVGGSVDYTEGLEGSRFIVTNPNA
+ KSTCGCGSSFSI"
+ misc_feature complement(2713163..2713504)
+ /locus_tag="SARI_02800"
+ /note="iron-sulfur cluster insertion protein ErpA;
+ Provisional; Region: PRK13623"
+ /db_xref="CDD:184186"
+ gene complement(2713585..2715006)
+ /locus_tag="SARI_02801"
+ CDS complement(2713585..2715006)
+ /locus_tag="SARI_02801"
+ /inference="protein motif:HMMPanther:IPR001807"
+ /inference="protein motif:HMMPfam:IPR001807"
+ /inference="similar to AA sequence:REFSEQ:YP_215190.1"
+ /note="Acts as an electrical shunt for an
+ outwardly-directed proton pump that is linked to amino
+ acid decarboxylation"
+ /codon_start=1
+ /transl_table=11
+ /product="chloride channel protein"
+ /protein_id="YP_001571791.1"
+ /db_xref="GI:161504679"
+ /db_xref="InterPro:IPR001807"
+ /translation="MKTDTPTFEAQQIVRLRRGRLIRRLVQRDKTPLAILLMAAVVGT
+ LTGLVGVAFEKAVSWVQNMRIGALVQVADHAFLLWPLAFILSALLAMVGYFLVRKFAP
+ EAGGSGIPEIEGALEELRPVRWWRVLPVKFIGGMGTLGAGMVLGREGPTVQIGGNLGR
+ MVLDVFRMRSAEARHTLLATGAAAGLSAAFNAPLAGILFIIEEMRPQFRYNLISIKAV
+ FTGVIMSSIVFRIFNGEAPIIEVGKLSNAPVNTLWLYLVLGIIFGCVGPVFNTLVLRT
+ QDMFQRFHGGEIKKWVLMGGAIGGLCGILGLIEPEAAGGGFNLIPIAAAGNFSVGLLL
+ FIFITRVVTTLLCFSSGAPGGIFAPMLALGTLLGTAFGMAAAVLFPQYHLEAGTFAIA
+ GMGALMAASVRAPLTGIVLVLEMTDNYQLILPMIITCLGATLLAQFLGGKPLYSTILA
+ RTLAKQDAEQAAKNQSTPAGENT"
+ misc_feature complement(2713618..2714850)
+ /locus_tag="SARI_02801"
+ /note="Chloride channel protein EriC [Inorganic ion
+ transport and metabolism]; Region: EriC; COG0038"
+ /db_xref="CDD:223116"
+ misc_feature complement(2713657..2714850)
+ /locus_tag="SARI_02801"
+ /note="ClC chloride channel EriC. This domain is found in
+ the EriC chloride transporters that mediate the extreme
+ acid resistance response in eubacteria and archaea. This
+ response allows bacteria to survive in the acidic
+ environments by decarboxylation-linked...; Region: EriC;
+ cd01031"
+ /db_xref="CDD:238504"
+ misc_feature complement(order(2713672..2713674,2713930..2713944,
+ 2714557..2714571,2714677..2714691))
+ /locus_tag="SARI_02801"
+ /note="Cl- selectivity filter; other site"
+ /db_xref="CDD:238504"
+ misc_feature complement(order(2713672..2713674,2713936..2713944,
+ 2714560..2714565,2714680..2714682,2714686..2714688))
+ /locus_tag="SARI_02801"
+ /note="Cl- binding residues [ion binding]; other site"
+ /db_xref="CDD:238504"
+ misc_feature complement(2714563..2714565)
+ /locus_tag="SARI_02801"
+ /note="pore gating glutamate residue; other site"
+ /db_xref="CDD:238504"
+ misc_feature complement(order(2713696..2713698,2713705..2713710,
+ 2713729..2713731,2713765..2713767,2713789..2713791,
+ 2713798..2713800,2714338..2714340,2714359..2714361,
+ 2714398..2714400,2714425..2714427))
+ /locus_tag="SARI_02801"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238504"
+ misc_feature complement(2714398..2714400)
+ /locus_tag="SARI_02801"
+ /note="H+/Cl- coupling transport residue; other site"
+ /db_xref="CDD:238504"
+ gene 2715176..2716456
+ /locus_tag="SARI_02802"
+ CDS 2715176..2716456
+ /locus_tag="SARI_02802"
+ /inference="protein motif:HMMPanther:IPR005814"
+ /inference="protein motif:HMMPfam:IPR005814"
+ /inference="protein motif:HMMTigr:IPR004639"
+ /inference="protein motif:ScanRegExp:IPR005814"
+ /inference="similar to AA sequence:INSD:ABG68204.1"
+ /note="Converts (S)-4-amino-5-oxopentanoate to
+ 5-aminolevulinate during the porphyrin biosynthesis
+ pathway"
+ /codon_start=1
+ /transl_table=11
+ /product="glutamate-1-semialdehyde aminotransferase"
+ /protein_id="YP_001571792.1"
+ /db_xref="GI:161504680"
+ /db_xref="InterPro:IPR004639"
+ /db_xref="InterPro:IPR005814"
+ /translation="MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAWL
+ YDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAELVTSL
+ VPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTL
+ GQPNSPGVPADFAKHTLTCVYNDLASVRAAFEQYPQEIACIIVEPVAGNMNCVLPLPE
+ FLPGLRALCDEFGALLIIDEVMTGFRVALAGAQDYYGVVPDLTCLGKIIGGGMPVGAF
+ GGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGIHETLNKLTTRLAEG
+ LREAAQEAGIPLVVNHVGGMFGIFFTDAGSVTCYQDVMACDVERFKRFFHLMLDEGVY
+ LAPSAFEAGFMSVAHSMDDINNTIDAARRVFAKL"
+ misc_feature 2715176..2716453
+ /locus_tag="SARI_02802"
+ /note="glutamate-1-semialdehyde aminotransferase;
+ Provisional; Region: PRK00062"
+ /db_xref="CDD:234607"
+ misc_feature 2715194..2716444
+ /locus_tag="SARI_02802"
+ /note="Acetyl ornithine aminotransferase family. This
+ family belongs to pyridoxal phosphate (PLP)-dependent
+ aspartate aminotransferase superfamily (fold I). The major
+ groups in this CD correspond to ornithine
+ aminotransferase, acetylornithine aminotransferase;
+ Region: OAT_like; cd00610"
+ /db_xref="CDD:99735"
+ misc_feature order(2715515..2715523,2715599..2715604,2715608..2715610,
+ 2715785..2715787,2715884..2715886,2715890..2715895,
+ 2715968..2715970)
+ /locus_tag="SARI_02802"
+ /note="inhibitor-cofactor binding pocket; inhibition site"
+ /db_xref="CDD:99735"
+ misc_feature order(2715518..2715523,2715599..2715604,2715785..2715787,
+ 2715884..2715886,2715893..2715895,2715968..2715970)
+ /locus_tag="SARI_02802"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:99735"
+ misc_feature 2715968..2715970
+ /locus_tag="SARI_02802"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:99735"
+ gene complement(2716549..2718531)
+ /locus_tag="SARI_02803"
+ CDS complement(2716549..2718531)
+ /locus_tag="SARI_02803"
+ /inference="protein motif:HMMPfam:IPR000522"
+ /note="part of the FhuBCD ATP-dependent iron (III)
+ hydroxamate transporter involved in the high-affinity
+ transport of Fe(3+)-ferrichrome"
+ /codon_start=1
+ /transl_table=11
+ /product="iron-hydroxamate transporter permease subunit"
+ /protein_id="YP_001571793.1"
+ /db_xref="GI:161504681"
+ /db_xref="InterPro:IPR000522"
+ /translation="MNKRVARFPVFLLAGLFIIAVWLTWTNLSIALPRDQWRQAMWSP
+ NVDAIGQMIFHYSLLPRLAISLLVGAGLGLVGVLFQQVLRNPLAEPTTLGVATGAQLG
+ ITVTTLWAIPGALTTQFAALAGACIVGALVFGVSWGKRLSPVTLILAGLVVSLYCGAI
+ NQLLVIFRHDQLQSMFLWSTGTLTQTDWSGVQRLWPQLVGGVMLTLLLLRPMTLMGLD
+ DGVARNLGLALSLARLAALSLAIVLSALLVNAVGIIGFIGLFAPLLAKMLGARRLLAR
+ LMLAPIIGALILWLSDQIILWLTRVWMEVSTGSITALIGAPLLLWLLPRLKSMSAPDM
+ NASDRAAAERRHVLAFAVAGGALLLLATFVALSFGRDAHGWTWASGTLLEELMPWRWS
+ RILAALMAGVMLAVAGCIIQRLTGNPMASPEVLGISSGAAFGVVLMLFLVPGNAFGWL
+ LPAGSLGAAATLLIITLAAGRGGFSPQRMLLAGMALSTAFTMLLMMLQASGDPRMAGV
+ LTWISGSTYNASGEQVLRTGIVMVILLAMTPLCRRWLTILPLGSDAACAVGVALTPSR
+ IALLALAACLTATATMTIGPLSFVGLMAPHIARMMGFRRTMPHMVISALIGGLLLVFA
+ DWCGRMLMFPYQVPAGLLSTFIGAPYFIYLLRKQSR"
+ misc_feature complement(2716552..2718531)
+ /locus_tag="SARI_02803"
+ /note="iron-hydroxamate transporter permease subunit;
+ Provisional; Region: PRK10577"
+ /db_xref="CDD:236720"
+ misc_feature complement(2717584..2718282)
+ /locus_tag="SARI_02803"
+ /note="Transmembrane subunit (TM), of Periplasmic Binding
+ Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters involved in the uptake of siderophores, heme,
+ vitamin B12, or the divalent cations Mg2+ and Zn2+.
+ PBP-dependent ABC transporters consist of...; Region:
+ TM_ABC_iron-siderophores_like; cd06550"
+ /db_xref="CDD:119348"
+ misc_feature complement(order(2717713..2717715,2717734..2717736,
+ 2717857..2717865,2717869..2717886,2717890..2717895,
+ 2717899..2717907,2717911..2717916,2718274..2718282))
+ /locus_tag="SARI_02803"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119348"
+ misc_feature complement(order(2717584..2717586,2717593..2717598,
+ 2717605..2717607,2717764..2717766,2717992..2717994,
+ 2718001..2718006,2718037..2718039,2718043..2718048,
+ 2718055..2718057,2718064..2718069,2718076..2718081,
+ 2718088..2718093,2718097..2718099,2718256..2718258,
+ 2718271..2718273,2718277..2718279))
+ /locus_tag="SARI_02803"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119348"
+ misc_feature complement(order(2717614..2717616,2717644..2717646,
+ 2717776..2717778,2717788..2717790,2717962..2717964,
+ 2718037..2718039))
+ /locus_tag="SARI_02803"
+ /note="putative PBP binding regions; other site"
+ /db_xref="CDD:119348"
+ misc_feature complement(2716567..2717307)
+ /locus_tag="SARI_02803"
+ /note="Transmembrane subunit (TM), of Periplasmic Binding
+ Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters involved in the uptake of siderophores, heme,
+ vitamin B12, or the divalent cations Mg2+ and Zn2+.
+ PBP-dependent ABC transporters consist of...; Region:
+ TM_ABC_iron-siderophores_like; cd06550"
+ /db_xref="CDD:119348"
+ misc_feature complement(order(2716714..2716716,2716735..2716737,
+ 2716858..2716866,2716870..2716887,2716891..2716896,
+ 2716900..2716908,2716912..2716917,2717278..2717286,
+ 2717296..2717298))
+ /locus_tag="SARI_02803"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119348"
+ misc_feature complement(order(2716567..2716569,2716576..2716581,
+ 2716588..2716590,2716597..2716602,2716609..2716611,
+ 2716765..2716767,2716993..2716995,2717002..2717007,
+ 2717038..2717040,2717044..2717049,2717056..2717058,
+ 2717065..2717070,2717077..2717082,2717089..2717094,
+ 2717098..2717100,2717260..2717262,2717275..2717277,
+ 2717281..2717283))
+ /locus_tag="SARI_02803"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119348"
+ misc_feature complement(order(2716618..2716620,2716645..2716647,
+ 2716777..2716779,2716789..2716791,2716963..2716965,
+ 2717038..2717040))
+ /locus_tag="SARI_02803"
+ /note="putative PBP binding regions; other site"
+ /db_xref="CDD:119348"
+ gene complement(2718528..2719373)
+ /locus_tag="SARI_02804"
+ CDS complement(2718528..2719373)
+ /locus_tag="SARI_02804"
+ /inference="protein motif:HMMPfam:IPR002491"
+ /inference="similar to AA sequence:INSD:AAV76231.1"
+ /note="Part of the FhuBCD ATP-dependent iron (III)
+ hydroxamate transporter; binds to all hydroxamate
+ siderophores"
+ /codon_start=1
+ /transl_table=11
+ /product="iron-hydroxamate transporter substrate-binding
+ subunit"
+ /protein_id="YP_001571794.1"
+ /db_xref="GI:161504682"
+ /db_xref="InterPro:IPR002491"
+ /translation="MALSPLLWQMNTAQAAAIDPRRIVALEWLPVELLLALGITPYGV
+ ADVPNYKLWVSEPPLPDSVIDVGLRTEPNLELLTEMKPSFMVWSAGYGPSPEKLARIA
+ PGRGFDFSDGKKPLAVARRSLVELAQTLNLEAAAEKHLAQYDRFIASLKPRFIRRGGR
+ PLLMTTLIDPRHMLVLGPNCLFQEVLDEYGIRNAWQGETNFWGSTAVSIDRLAMYKEA
+ DVICFDHGNHTDMNALMATPLWQAMPFVRAGRFHRVPAVWFYGATLSTMHFVRILNNV
+ LGGKA"
+ misc_feature complement(2718564..2719319)
+ /locus_tag="SARI_02804"
+ /note="Fe3+-siderophore binding domain FhuD. These
+ proteins have been shown to function as initial receptors
+ in ABC transport of Fe3+-siderophores in many eubacterial
+ species. They belong to the TroA-like superfamily of
+ helical backbone metal receptor proteins...; Region: FhuD;
+ cd01146"
+ /db_xref="CDD:238566"
+ misc_feature complement(2718600..2719262)
+ /locus_tag="SARI_02804"
+ /note="Periplasmic binding protein; Region: Peripla_BP_2;
+ pfam01497"
+ /db_xref="CDD:216532"
+ misc_feature complement(order(2718852..2718854,2719101..2719103,
+ 2719164..2719169,2719215..2719217))
+ /locus_tag="SARI_02804"
+ /note="siderophore binding site; other site"
+ /db_xref="CDD:238566"
+ gene complement(2719418..2720215)
+ /locus_tag="SARI_02805"
+ CDS complement(2719418..2720215)
+ /locus_tag="SARI_02805"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:REFSEQ:NP_459197.1"
+ /note="part of the FhuBCD ATP-dependent iron (III)
+ hydroxamate transporter"
+ /codon_start=1
+ /transl_table=11
+ /product="iron-hydroxamate transporter ATP-binding
+ subunit"
+ /protein_id="YP_001571795.1"
+ /db_xref="GI:161504683"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MQENHIHPDTTFALRSVAFRVPGRTLLHPLSLTFPAGKVTGLIG
+ HNGSGKSTLLKMLGRHQPPSEGDILLDNQPLASWSSKAFARKVAYLPQQLPQAEGMTV
+ RELVAIGRYPWHGALGRFGVADREKVEEAITLVGLKPLAHRLVDSLSGGERQRAWIAM
+ LVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQQRGLTVVAVLHDINMAARYCDYL
+ VALRGGEMIAQGTPAELMRSETLEQIYGIPMGILPHPAGAAPVSFVY"
+ misc_feature complement(2719421..2720215)
+ /locus_tag="SARI_02805"
+ /note="iron-hydroxamate transporter ATP-binding subunit;
+ Provisional; Region: PRK10575"
+ /db_xref="CDD:182561"
+ misc_feature complement(2719526..2720179)
+ /locus_tag="SARI_02805"
+ /note="ATP-binding component of iron-siderophores, vitamin
+ B12 and hemin transporters and related proteins; Region:
+ ABC_Iron-Siderophores_B12_Hemin; cd03214"
+ /db_xref="CDD:213181"
+ misc_feature complement(2720063..2720086)
+ /locus_tag="SARI_02805"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213181"
+ misc_feature complement(order(2719598..2719600,2719697..2719702,
+ 2719940..2719942,2720060..2720068,2720072..2720077))
+ /locus_tag="SARI_02805"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213181"
+ misc_feature complement(2719940..2719951)
+ /locus_tag="SARI_02805"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213181"
+ misc_feature complement(2719745..2719774)
+ /locus_tag="SARI_02805"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213181"
+ misc_feature complement(2719697..2719714)
+ /locus_tag="SARI_02805"
+ /note="Walker B; other site"
+ /db_xref="CDD:213181"
+ misc_feature complement(2719679..2719690)
+ /locus_tag="SARI_02805"
+ /note="D-loop; other site"
+ /db_xref="CDD:213181"
+ misc_feature complement(2719592..2719612)
+ /locus_tag="SARI_02805"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213181"
+ gene complement(2720264..2722507)
+ /locus_tag="SARI_02806"
+ CDS complement(2720264..2722507)
+ /locus_tag="SARI_02806"
+ /inference="protein motif:HMMPfam:IPR000531"
+ /inference="protein motif:HMMPfam:IPR012910"
+ /inference="protein motif:HMMTigr:IPR010105"
+ /inference="protein motif:ScanRegExp:IPR010916"
+ /note="involved with the transport of ferrichrome across
+ the outer membrane; binds the ferrichrome-iron ligand and
+ interacts with the TonB protein"
+ /codon_start=1
+ /transl_table=11
+ /product="ferrichrome outer membrane transporter"
+ /protein_id="YP_001571796.1"
+ /db_xref="GI:161504684"
+ /db_xref="InterPro:IPR000531"
+ /db_xref="InterPro:IPR010105"
+ /db_xref="InterPro:IPR010916"
+ /db_xref="InterPro:IPR012910"
+ /translation="MARLKTAQPNSSLRKIAVVVATAVSGMSVYAQAAVQPKEETITV
+ TAAPAPQESAWGPAATIAARQSATATKTDTPIQKVPQSISVVTAEEMALHQPKSVKEA
+ LSYTPGVAVGTRGASNTYDYLIIRGFAADGQSQNNYLNGLKMQGNFYNDAVIDPYMLE
+ RAEVMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKMGTDSLFQTGFDFSDALD
+ EDGVYSYRLTGLARSANAQQDRAEEQRYAIAPAFTWRPDEKTNFTLLSYFQNEPETGY
+ YGWLPKEGTVEPLPNGKRLPTDFNEGAKNNTYSRNEKMVGYSFDHEFNDTFTVRQNLR
+ YAENKVAQNSVYGYGVCSDSANANSKQCAALAPADKGHYLARKYVVDDEKLQNFTVDT
+ QLQSKFATGEVDHILLTGVDFMRMRNDINAWFGYDDSVPLLDLYNPVYTDFDFASRDP
+ ATSGPYQILNKQKQTGLYVQDQAQWNKVLVTVGGRYDWADQESLNRTTSVTSKRDDKQ
+ FTWRGGVNYLFDNGITPYFSYSESFEPASQTGENGKIFAPSKGKQYEAGVKYVPNDRP
+ IVITGAVYQLTKTNNLMADPNGSFWSVEGGEIRSRGVEIEAKAALSASINVVGSYTYT
+ DAEYTTDTTYKGNTPAQVPKHMASLWGDYTFFDGPLSGLTLGTGGRLTGSSYGDPANS
+ FKVGSYTVVDALVRYDLARVGMAGSNVALHVNNLLDREYVASCFQTYGCFWGAERQVV
+ ATATFRF"
+ misc_feature complement(2720267..2722507)
+ /locus_tag="SARI_02806"
+ /note="ferrichrome outer membrane transporter;
+ Provisional; Region: PRK10044"
+ /db_xref="CDD:236643"
+ misc_feature complement(2720267..2722264)
+ /locus_tag="SARI_02806"
+ /note="TonB dependent/Ligand-Gated channels are created by
+ a monomeric 22 strand (22,24) anti-parallel beta-barrel.
+ Ligands apparently bind to the large extracellular loops.
+ The N-terminal 150-200 residues form a plug from the
+ periplasmic end of barrel; Region: ligand_gated_channel;
+ cd01347"
+ /db_xref="CDD:238657"
+ misc_feature complement(order(2721950..2721976,2722010..2722042,
+ 2722076..2722096,2722103..2722105,2722124..2722141,
+ 2722178..2722207,2722235..2722264))
+ /locus_tag="SARI_02806"
+ /note="N-terminal plug; other site"
+ /db_xref="CDD:238657"
+ misc_feature complement(order(2721359..2721361,2721488..2721490))
+ /locus_tag="SARI_02806"
+ /note="ligand-binding site [chemical binding]; other site"
+ /db_xref="CDD:238657"
+ gene complement(2722801..2725320)
+ /gene="mrcB"
+ /locus_tag="SARI_02807"
+ CDS complement(2722801..2725320)
+ /gene="mrcB"
+ /locus_tag="SARI_02807"
+ /inference="protein motif:BlastProDom:IPR001264"
+ /inference="protein motif:HMMPfam:IPR001264"
+ /inference="protein motif:HMMPfam:IPR001460"
+ /inference="protein motif:HMMTigr:IPR011813"
+ /inference="protein motif:superfamily:IPR012338"
+ /note="'bifunctional periplasmic enzyme; contains
+ transglycosylase and transpeptidase activity; major enzyme
+ for peptidoglycan biosynthesis in Escherichia coli;
+ transmembrane protein; forms dimers; three variants, one
+ of which may be a degradation product, while the other
+ appears to result from an alternative initiation site, are
+ found within the cell'"
+ /codon_start=1
+ /transl_table=11
+ /product="penicillin-binding protein 1b"
+ /protein_id="YP_001571797.1"
+ /db_xref="GI:161504685"
+ /db_xref="InterPro:IPR001264"
+ /db_xref="InterPro:IPR001460"
+ /db_xref="InterPro:IPR011813"
+ /db_xref="InterPro:IPR012338"
+ /translation="MAGNDREPIGRKGKPSRPVKQKVSRRRQHDDDYDDDYEDEEPMP
+ RKGKGKGRKPRGKRGWLWLLLKLFIVFVVLFAIYGVYLDQKIRSRIDGKVWQLPAAVY
+ GRMVNLEPDMPVSKNEMVKLLEATQYRLVTKMTRPGEFTVQANSIEMIRRPFDFPDSK
+ EGQVRARLTFDDGRLETIVNLDNNRQFGFFRLDPRLITMLSSPNGEQRLFVPRSGFPD
+ LLVDTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNLFLSSE
+ RSYWRKANEAYMALIMDARYSKDRILELYMNEVYLGQSGDNEIRGFPLASLYYFGRPV
+ EELSLDQQALLVGMVKGASIYNPWRNPKLALERRNLVLRLLQQQKIIDQELYDMLSAR
+ PLGVQPRGGVISPQPAFMQMVRQELQAKLGDKIKDLSGVKIFTTFDPVAQDAAEKAVV
+ EGIPALKKQRKLSDLETAMVVVDRFSGEVRAMVGGAEPQYAGYNRAMQARRSIGSLAK
+ PATYLTALSQPNLYRLNTWIADAPISLRQPNGQIWSPQNDDRRYSESGKVMLVDALTR
+ SMNVPTVNLGMALGLPAVTDTWMKLGVPKDQLNPVPAMLLGALNLTPIEVAQAFQTIA
+ SGGNRAPLSALRSVIAEDGKVLYQSYPQAERAVPAQAAYLTLWTMQQVVQRGTGRQLG
+ AKYPGLHLAGKTGTTNNNVDTWFAGIDGSQVTITWVGRDNNQPTKLYGASGAMAIYQR
+ YLANQTPTPLVLTPPEDVVDMGVDYDGNFVCSGGMRTLPVWTDDPNTLCQQGEMMQQQ
+ QPSGNPFDQSSQPQQPAQQQPPKEEKSDGVAGWIKEMFGGN"
+ misc_feature complement(2722810..2725320)
+ /gene="mrcB"
+ /locus_tag="SARI_02807"
+ /note="bifunctional glycosyl transferase/transpeptidase;
+ Reviewed; Region: mrcB; PRK09506"
+ /db_xref="CDD:236544"
+ misc_feature complement(2724235..2724729)
+ /gene="mrcB"
+ /locus_tag="SARI_02807"
+ /note="Transglycosylase; Region: Transgly; pfam00912"
+ /db_xref="CDD:201501"
+ misc_feature complement(2723194..2723913)
+ /gene="mrcB"
+ /locus_tag="SARI_02807"
+ /note="Penicillin binding protein transpeptidase domain;
+ Region: Transpeptidase; cl17760"
+ /db_xref="CDD:248314"
+ gene complement(2725460..2727934)
+ /locus_tag="SARI_02808"
+ CDS complement(2725460..2727934)
+ /locus_tag="SARI_02808"
+ /inference="protein motif:HMMPfam:IPR001650"
+ /inference="protein motif:HMMPfam:IPR007502"
+ /inference="protein motif:HMMPfam:IPR013689"
+ /inference="protein motif:HMMPIR:IPR010225"
+ /inference="protein motif:HMMSmart:IPR001650"
+ /inference="protein motif:HMMSmart:IPR014001"
+ /inference="protein motif:HMMTigr:IPR010225"
+ /inference="protein motif:ScanRegExp:IPR001241"
+ /note="similar in sequence to the ATP-dependent RNA
+ helicase HrpA"
+ /codon_start=1
+ /transl_table=11
+ /product="ATP-dependent RNA helicase HrpB"
+ /protein_id="YP_001571798.1"
+ /db_xref="GI:161504686"
+ /db_xref="InterPro:IPR001241"
+ /db_xref="InterPro:IPR001650"
+ /db_xref="InterPro:IPR007502"
+ /db_xref="InterPro:IPR010225"
+ /db_xref="InterPro:IPR013689"
+ /db_xref="InterPro:IPR014001"
+ /translation="MLQCGAKKVNPVEPFVTSLPVAAVLPELLTALKTAPQVLLSAPT
+ GAGKSTWLPLQLLQQGPVAGKILLLEPRRLAARNVAQRLAEGLNEKPGETVGYRMRAQ
+ NCVGPHTRLEVVTEGVLTRMIQRDPELSGVGLVILDEFHERSLQADLALALLLDIQQG
+ LRDDLRLLIMSATLDNDRLCQRLADAPTIVSQGRAFPVERRYQPLAAHLRFDEAVAMA
+ TAELLRNESGSLLLFLPGVGEIQRVHEHLASRVGSDVLLCPLYGALSLEAQRKAIIPA
+ PAGMRKVVLATNIAETSLTIEGIRLVVDSAQERVARFDARTGLTRLVTQRISQASMTQ
+ RAGRAGRLAPGICVHLLAKEQAERAAAQSEPEILQSDLSGLLMEVLQWGCHDPASLFW
+ LDMPPEANLQAARRLLVMLGALEGDRLSARGRKMAAIGNDPRLAAMLVNAGEGDSAAT
+ AARLAAILEEPPRGGGTDLSEVFSRRQPGWQQRSQQLLKRLQVRNGEPDSALIAPLLA
+ GAFSDRIARRRGQEGRYQLANGMGAMLDADDALGRHEWLIAPLLLQGSASPDARILLA
+ QPLDIASLIQACPDLLRQSDTIEWDEAQGTLKAWRRICIGQLTVNVQPLAKPSEEELH
+ QAMLNGIRDKGLAVLNWTPEAEQFRLRLHCAAKWLPEYDWPPVDEASLLATLERWLLP
+ HMTGVQSLRGLKSLNVNQALRGLLDYPMLQRLDSELPGHYTVPTGSRIAIRYHEDNPP
+ ALAVRMQEMFGEASTPTLAQGRVPLVLELLSPAQRPLQITRDLSAFWQGAYREVQKEM
+ KGRYPKHVWPDDPANTAPTRRTKKYS"
+ misc_feature complement(2725463..2727889)
+ /locus_tag="SARI_02808"
+ /note="ATP-dependent RNA helicase HrpB; Provisional;
+ Region: PRK11664"
+ /db_xref="CDD:236950"
+ misc_feature complement(2727413..2727823)
+ /locus_tag="SARI_02808"
+ /note="DEAD-like helicases superfamily. A diverse family
+ of proteins involved in ATP-dependent RNA or DNA
+ unwinding. This domain contains the ATP-binding region;
+ Region: DEXDc; cd00046"
+ /db_xref="CDD:238005"
+ misc_feature complement(2727788..2727802)
+ /locus_tag="SARI_02808"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238005"
+ misc_feature complement(2727512..2727523)
+ /locus_tag="SARI_02808"
+ /note="putative Mg++ binding site [ion binding]; other
+ site"
+ /db_xref="CDD:238005"
+ misc_feature complement(2726885..2727274)
+ /locus_tag="SARI_02808"
+ /note="Helicase superfamily c-terminal domain; associated
+ with DEXDc-, DEAD-, and DEAH-box proteins, yeast
+ initiation factor 4A, Ski2p, and Hepatitis C virus NS3
+ helicases; this domain is found in a wide variety of
+ helicases and helicase related proteins; may...; Region:
+ HELICc; cd00079"
+ /db_xref="CDD:238034"
+ misc_feature complement(order(2727068..2727076,2727149..2727154,
+ 2727221..2727232))
+ /locus_tag="SARI_02808"
+ /note="nucleotide binding region [chemical binding]; other
+ site"
+ /db_xref="CDD:238034"
+ misc_feature complement(order(2726912..2726914,2726921..2726923,
+ 2726933..2726935,2727050..2727052))
+ /locus_tag="SARI_02808"
+ /note="ATP-binding site [chemical binding]; other site"
+ /db_xref="CDD:238034"
+ misc_feature complement(<2726603..2726707)
+ /locus_tag="SARI_02808"
+ /note="Helicase associated domain (HA2) Add an annotation;
+ Region: HA2; smart00847"
+ /db_xref="CDD:214852"
+ misc_feature complement(2725502..2725900)
+ /locus_tag="SARI_02808"
+ /note="ATP-dependent helicase C-terminal; Region: HrpB_C;
+ pfam08482"
+ /db_xref="CDD:149509"
+ gene 2727962..2728492
+ /locus_tag="SARI_02809"
+ CDS 2727962..2728492
+ /locus_tag="SARI_02809"
+ /inference="protein motif:HMMPfam:IPR004175"
+ /inference="protein motif:HMMTigr:IPR004175"
+ /inference="protein motif:superfamily:IPR009097"
+ /inference="similar to AA sequence:INSD:AAX64094.1"
+ /note="'KEGG: sec:SC0188 1.9e-91 ligT; 2'-5' RNA ligase
+ K01975;
+ COG: COG1514 2-5 RNA ligase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="2'-5' RNA ligase"
+ /protein_id="YP_001571799.1"
+ /db_xref="GI:161504687"
+ /db_xref="InterPro:IPR004175"
+ /db_xref="InterPro:IPR009097"
+ /translation="MSEPKRLFFAIDLPDEARAQIIAWRAAHFASEDGRPVAAANLHL
+ TLAFLGDVSDDKQRALAQLAGRIRQPGFMLHLDDAGQWLRSRVVWLGMRQPPRGLLQL
+ ANMLRAQAARSGCYQSPQPFHPHITLLRDASHAVTIPPPGFCWSFPVTSFALYASSYG
+ QGRTRYAELQRWTLGE"
+ misc_feature 2727962..2728489
+ /locus_tag="SARI_02809"
+ /note="2'-5' RNA ligase; Provisional; Region:
+ PRK15124"
+ /db_xref="CDD:185079"
+ misc_feature 2727992..2728228
+ /locus_tag="SARI_02809"
+ /note="LigT like Phosphoesterase; Region: LigT_PEase;
+ pfam02834"
+ /db_xref="CDD:217246"
+ misc_feature 2728235..2728447
+ /locus_tag="SARI_02809"
+ /note="LigT like Phosphoesterase; Region: LigT_PEase;
+ pfam02834"
+ /db_xref="CDD:217246"
+ gene 2728509..2729213
+ /locus_tag="SARI_02810"
+ CDS 2728509..2729213
+ /locus_tag="SARI_02810"
+ /inference="protein motif:BlastProDom:IPR005224"
+ /inference="protein motif:HMMPfam:IPR005224"
+ /inference="protein motif:HMMTigr:IPR005224"
+ /inference="similar to AA sequence:REFSEQ:NP_454803.1"
+ /note="Regulatory factor involved in maltose metabolism"
+ /codon_start=1
+ /transl_table=11
+ /product="sugar fermentation stimulation protein A"
+ /protein_id="YP_001571800.1"
+ /db_xref="GI:161504688"
+ /db_xref="InterPro:IPR005224"
+ /translation="MLFSPPLQRATLIQRYKRFLADVITLDGTALTLHCPNTGAMTGC
+ ATPGDTVWYSTSENTKRKYPHTWELTETQSGVFICVNTLWANRLTKEAIQEDRLPELA
+ GYNILKSEVKYGAERSRIDFMLQADFRPDCYIEVKSVTLAEKENGYFPDAITERGQKH
+ LRELMGVAAAGHRAVVLFAVLHSAITRFSPARHIDIKYAQLLSEAQNKGVEVLAYKAE
+ LSATKMELNKSVPIML"
+ misc_feature 2728509..2729210
+ /locus_tag="SARI_02810"
+ /note="putative DNA-binding transcriptional regulator;
+ Reviewed; Region: PRK00347"
+ /db_xref="CDD:234733"
+ gene 2729390..2729845
+ /gene="dksA"
+ /locus_tag="SARI_02811"
+ CDS 2729390..2729845
+ /gene="dksA"
+ /locus_tag="SARI_02811"
+ /inference="protein motif:FPrintScan:IPR000962"
+ /inference="protein motif:HMMPfam:IPR000962"
+ /inference="protein motif:HMMTigr:IPR012784"
+ /inference="protein motif:ScanRegExp:IPR000962"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:INSD:AAV76225.1"
+ /note="'COG: COG1734 DnaK suppressor protein;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="RNA polymerase-binding transcription factor"
+ /protein_id="YP_001571801.1"
+ /db_xref="GI:161504689"
+ /db_xref="InterPro:IPR000962"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012784"
+ /translation="MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLSHFKRIL
+ EAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKT
+ LKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMAG"
+ misc_feature 2729390..2729842
+ /gene="dksA"
+ /locus_tag="SARI_02811"
+ /note="RNA polymerase-binding transcription factor;
+ Provisional; Region: dksA; PRK10778"
+ /db_xref="CDD:182722"
+ gene 2729869..2730810
+ /locus_tag="SARI_02812"
+ CDS 2729869..2730810
+ /locus_tag="SARI_02812"
+ /inference="protein motif:HMMPanther:IPR000924"
+ /inference="protein motif:HMMPfam:IPR000924"
+ /inference="similar to AA sequence:INSD:AAL19149.1"
+ /note="'this tRNA synthetase lacks the tRNA anticodon
+ interaction domain; instead this enzyme modifies tRNA(Asp)
+ with glutamate by esterifying glutamate to the
+ 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of
+ queosine generating a modified nucleoside at the first
+ anticodon position of tRNAAsp; the modified tRNA does not
+ bind elongation factor Tu'"
+ /codon_start=1
+ /transl_table=11
+ /product="glutamyl-Q tRNA(Asp) synthetase"
+ /protein_id="YP_001571802.1"
+ /db_xref="GI:161504690"
+ /db_xref="InterPro:IPR000924"
+ /translation="MTGGSFPALFFIARSMTDSHYIGRFAPSPSGELHFGSLIAALGS
+ YLQARAQGGVWRVRIEDIDPPREVPGAAAIILRQLEHYGLHWDGEILWQSQRHEAYRE
+ ALAWLHEQGLSYYCTCPRSRIQRLGGIYDGHCRTLCHGPENAAVRIKQQHPVMRFHDA
+ LRGDILADPQLAGEDFIIHRRDGLFAYNLAVVVDDHFQGVTEIVRGADLIEPTVRQLS
+ LYKQFGWRAPDYVHLPLARNEQGAKLSKQNHAPALPTGDPRPVLVQALRFLGQRAVVP
+ WQEMSVEQLLRFAVAHWRLTAVPTSANVNPAFSNASR"
+ misc_feature 2729914..>2730798
+ /locus_tag="SARI_02812"
+ /note="Glutamyl- and glutaminyl-tRNA synthetases
+ [Translation, ribosomal structure and biogenesis]; Region:
+ GlnS; COG0008"
+ /db_xref="CDD:223087"
+ misc_feature 2729914..2730792
+ /locus_tag="SARI_02812"
+ /note="glutamyl-Q tRNA(Asp) synthetase; Reviewed; Region:
+ PRK05710"
+ /db_xref="CDD:235573"
+ misc_feature order(2729968..2729979,2730601..2730606)
+ /locus_tag="SARI_02812"
+ /note="active site"
+ /db_xref="CDD:173912"
+ misc_feature order(2729968..2729970,2729977..2729979,2730604..2730606)
+ /locus_tag="SARI_02812"
+ /note="nucleotide binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:173912"
+ misc_feature 2729968..2729979
+ /locus_tag="SARI_02812"
+ /note="HIGH motif; other site"
+ /db_xref="CDD:173912"
+ misc_feature 2730601..2730606
+ /locus_tag="SARI_02812"
+ /note="KMSKS motif; other site"
+ /db_xref="CDD:173912"
+ gene 2730955..2732373
+ /gene="pcnB"
+ /locus_tag="SARI_02813"
+ CDS 2730955..2732373
+ /gene="pcnB"
+ /locus_tag="SARI_02813"
+ /inference="protein motif:HMMPfam:IPR002646"
+ /inference="protein motif:HMMPIR:IPR012222"
+ /inference="protein motif:HMMTigr:IPR010206"
+ /inference="similar to AA sequence:REFSEQ:YP_149535.1"
+ /note="Polymerase that creates the 3' poly(A) tail found
+ in some mRNA's"
+ /codon_start=1
+ /transl_table=11
+ /product="poly(A) polymerase I"
+ /protein_id="YP_001571803.1"
+ /db_xref="GI:161504691"
+ /db_xref="InterPro:IPR002646"
+ /db_xref="InterPro:IPR010206"
+ /db_xref="InterPro:IPR012222"
+ /translation="MTLPRCAIFTRVANFCRKVLSREESEAEQAVARPHMTIIPREQH
+ AISRKDISENALKVLYRLNKAGYEAYLVGGGVRDLLLGKKPKDFDVTTNATPDQVRKL
+ FRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGSESDRTTSQRGQNGMLLRDNIFGS
+ IEEDAQRRDFTINSLYYSVADFTVRDYVGGMQDLKEGVIRLIGNPETRYREDPVRMLR
+ AVRFAAKLNMRISSETAEPIPRLAALLNDIPPARLFEESLKLLQAGNGFETYQQLREY
+ NLFQPLFPTITRYFTENGDSAMERIIAQVLKNTDNRIHNDMRVNPAFLFAAMFWYPLL
+ EMAQKIAQESGLAYYDAFALAMNDVLDEACRSLAIPKRLTTLTRDIWQLQLRMSRRQG
+ KRAWKLMEHPKFRAAFDLLELRAQVEKNTELQRLAQWWGEFQASAPPEQKGMLNELDD
+ DPAPRRRRHRPRRKAPRREGAA"
+ misc_feature 2730955..2732307
+ /gene="pcnB"
+ /locus_tag="SARI_02813"
+ /note="poly(A) polymerase I; Provisional; Region: pcnB;
+ PRK11623"
+ /db_xref="CDD:236939"
+ misc_feature 2731108..2731542
+ /gene="pcnB"
+ /locus_tag="SARI_02813"
+ /note="Nucleotidyltransferase (NT) domain of ClassII
+ CCA-adding enzymes; Region: NT_ClassII-CCAase; cd05398"
+ /db_xref="CDD:143388"
+ misc_feature order(2731171..2731176,2731183..2731188,2731213..2731215,
+ 2731219..2731221,2731291..2731293,2731330..2731332,
+ 2731345..2731347,2731453..2731464,2731471..2731473)
+ /gene="pcnB"
+ /locus_tag="SARI_02813"
+ /note="active site"
+ /db_xref="CDD:143388"
+ misc_feature order(2731171..2731176,2731183..2731185,2731213..2731215,
+ 2731219..2731221,2731453..2731461,2731471..2731473)
+ /gene="pcnB"
+ /locus_tag="SARI_02813"
+ /note="NTP binding site [chemical binding]; other site"
+ /db_xref="CDD:143388"
+ misc_feature order(2731213..2731215,2731219..2731221,2731330..2731332)
+ /gene="pcnB"
+ /locus_tag="SARI_02813"
+ /note="metal binding triad [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:143388"
+ misc_feature 2731633..2731824
+ /gene="pcnB"
+ /locus_tag="SARI_02813"
+ /note="Probable RNA and SrmB- binding site of polymerase
+ A; Region: PolyA_pol_RNAbd; pfam12627"
+ /db_xref="CDD:221674"
+ misc_feature 2731978..2732307
+ /gene="pcnB"
+ /locus_tag="SARI_02813"
+ /note="Polymerase A arginine-rich C-terminus; Region:
+ PolyA_pol_arg_C; pfam12626"
+ /db_xref="CDD:221673"
+ gene complement(2732288..2732428)
+ /locus_tag="SARI_02815"
+ CDS complement(2732288..2732428)
+ /locus_tag="SARI_02815"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571804.1"
+ /db_xref="GI:161504693"
+ /translation="MTCSSGEAWLLPSAIYAIVMQRPRDAALSGADDAGGDVAQDRRP
+ AR"
+ gene 2732370..2732849
+ /locus_tag="SARI_02814"
+ CDS 2732370..2732849
+ /locus_tag="SARI_02814"
+ /inference="protein motif:HMMPfam:IPR000550"
+ /inference="protein motif:HMMTigr:IPR000550"
+ /inference="protein motif:ScanRegExp:IPR000550"
+ /inference="similar to AA sequence:REFSEQ:NP_459188.1"
+ /note="'catalyzes the formation of
+ 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine
+ diphosphate from
+ 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine and
+ ATP'"
+ /codon_start=1
+ /transl_table=11
+ /product="2-amino-4-hydroxy-6-hydroxymethyldihyropteridine
+ pyrophosphokinase"
+ /protein_id="YP_001571805.1"
+ /db_xref="GI:161504692"
+ /db_xref="InterPro:IPR000550"
+ /translation="MTIAYIALGSNQASPLEQVNAALKAIAGIPDSRIVAVSSFYRTP
+ PLGPQNQPDYLNAAVALDTALTAEDLLNHTQRIELQQGRIRKAERWGPRTLDLDIMLF
+ GDEVINTQRLTVPHYDMKNRGFMLWPLFEIAPDLIFPDGLPLRQQLMLLAVEKPVAW"
+ misc_feature 2732379..2732765
+ /locus_tag="SARI_02814"
+ /note="7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
+ (HPPK). Folate derivatives are essential cofactors in the
+ biosynthesis of purines, pyrimidines, and amino acids as
+ well as formyl-tRNA. Mammalian cells are able to utilize
+ pre-formed folates after...; Region: HPPK; cd00483"
+ /db_xref="CDD:238269"
+ misc_feature order(2732394..2732396,2732496..2732501,2732505..2732507,
+ 2732529..2732531,2732535..2732537,2732580..2732582,
+ 2732592..2732594,2732601..2732603,2732616..2732618,
+ 2732622..2732624,2732637..2732639,2732646..2732648,
+ 2732655..2732657,2732661..2732666,2732706..2732708,
+ 2732715..2732720,2732733..2732735,2732739..2732741)
+ /locus_tag="SARI_02814"
+ /note="catalytic center binding site [active]"
+ /db_xref="CDD:238269"
+ misc_feature order(2732580..2732582,2732592..2732594,2732601..2732603,
+ 2732616..2732618,2732622..2732624,2732646..2732648,
+ 2732661..2732666,2732706..2732708,2732715..2732720,
+ 2732733..2732735)
+ /locus_tag="SARI_02814"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238269"
+ gene 2732972..2733763
+ /gene="panB"
+ /locus_tag="SARI_02816"
+ CDS 2732972..2733763
+ /gene="panB"
+ /locus_tag="SARI_02816"
+ /inference="protein motif:HMMPfam:IPR003700"
+ /inference="protein motif:HMMTigr:IPR003700"
+ /inference="similar to AA sequence:REFSEQ:NP_454791.1"
+ /note="'catalyzes the formation of tetrahydrofolate and
+ 2-dehydropantoate from 5,10-methylenetetrahydrofolate and
+ 3-methyl-2-oxobutanoate'"
+ /codon_start=1
+ /transl_table=11
+ /product="3-methyl-2-oxobutanoate
+ hydroxymethyltransferase"
+ /protein_id="YP_001571806.1"
+ /db_xref="GI:161504694"
+ /db_xref="InterPro:IPR003700"
+ /translation="MKPTTIALLQKYKQEKKRFATITAYDYSFAKLFADEGLSVMLVG
+ DSLGMTIQGHDSTLPVTVEDIAYHTRAVRRGAPNCLLLSDLPFMAYATPEQAFANAAT
+ MMRAGANMVKIEGGAWLVDTVKMLTERAVPVCAHLGLTPQSVNIFGGYKVQGRGDAGD
+ QLLSDALALEGAGAQLLVLECVPVELAKRVTEALSIPVIGIGAGNVTDGQILVMHDAF
+ GITGGHIPKFAKNFLSTAGDIRAAVRQYISEVASGVYPGEEHSFH"
+ misc_feature 2732987..2733739
+ /gene="panB"
+ /locus_tag="SARI_02816"
+ /note="Ketopantoate hydroxymethyltransferase (KPHMT) is
+ the first enzyme in the pantothenate biosynthesis pathway.
+ Ketopantoate hydroxymethyltransferase (KPHMT) catalyzes
+ the first committed step in the biosynthesis of
+ pantothenate (vitamin B5), which is a...; Region:
+ KPHMT-like; cd06557"
+ /db_xref="CDD:119342"
+ misc_feature order(2732987..2732992,2733047..2733058,2733065..2733067,
+ 2733110..2733112,2733116..2733133,2733143..2733148,
+ 2733161..2733163,2733170..2733175,2733182..2733184,
+ 2733191..2733193,2733230..2733235,2733260..2733262,
+ 2733272..2733274,2733281..2733286,2733296..2733298,
+ 2733350..2733367,2733395..2733400,2733404..2733415,
+ 2733494..2733496,2733614..2733616,2733623..2733628,
+ 2733668..2733670,2733677..2733691)
+ /gene="panB"
+ /locus_tag="SARI_02816"
+ /note="oligomerization interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:119342"
+ misc_feature order(2733038..2733040,2733095..2733097,2733101..2733109,
+ 2733221..2733223,2733305..2733307,2733377..2733379,
+ 2733392..2733394,2733509..2733511,2733602..2733604,
+ 2733608..2733610)
+ /gene="panB"
+ /locus_tag="SARI_02816"
+ /note="active site"
+ /db_xref="CDD:119342"
+ misc_feature order(2733104..2733106,2733221..2733223,2733305..2733307)
+ /gene="panB"
+ /locus_tag="SARI_02816"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:119342"
+ gene 2733886..2734737
+ /locus_tag="SARI_02817"
+ CDS 2733886..2734737
+ /locus_tag="SARI_02817"
+ /inference="protein motif:HMMPfam:IPR003721"
+ /inference="protein motif:HMMTigr:IPR003721"
+ /inference="similar to AA sequence:REFSEQ:ZP_00696654.1"
+ /note="'KEGG: ssn:SSO_0141 9.3e-129 panC; pantothenate
+ synthetase K01918;
+ COG: COG0414 Panthothenate synthetase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571807.1"
+ /db_xref="GI:161504695"
+ /db_xref="InterPro:IPR003721"
+ /translation="MLIIETLPLLRQHIRRLRLEGKRIALVPTMGNLHDGHMKLVDEA
+ QDRADVVVASIFVNPMQFDRPDDLARYPRTLQEDCEKLNKRKVDIIFTPSPDQIYPQG
+ TEGQTYVEVPGLSTMLEGASRPGHFRGVSTIVSKLFNLVQPDIACFGEKDFQQLQLIR
+ KMVADMGYDIEIVGVPIVRAKDGLALSSRNGYLTAEQRKIAPGLYKVMSELGEKLQAG
+ ERDLEEMIAIAGQELNEKGFRPDDIQIRDADTLFELTDASKRVVILMSAWLGQARLID
+ NKIIELS"
+ misc_feature 2733886..2734725
+ /locus_tag="SARI_02817"
+ /note="pantoate--beta-alanine ligase; Region: panC;
+ TIGR00018"
+ /db_xref="CDD:232784"
+ misc_feature 2733886..2734716
+ /locus_tag="SARI_02817"
+ /note="Pantoate-beta-alanine ligase; Region: PanC;
+ cd00560"
+ /db_xref="CDD:185673"
+ misc_feature order(2733967..2733978,2733985..2733987,2733991..2733996,
+ 2734003..2734005,2734057..2734059,2734066..2734068,
+ 2734096..2734098,2734273..2734275,2734282..2734287,
+ 2734327..2734332,2734336..2734341,2734348..2734350,
+ 2734411..2734419,2734441..2734452)
+ /locus_tag="SARI_02817"
+ /note="active site"
+ /db_xref="CDD:185673"
+ misc_feature order(2733967..2733975,2733985..2733987,2733994..2733996,
+ 2734003..2734005,2734066..2734068,2734282..2734287,
+ 2734327..2734332,2734336..2734341,2734348..2734350,
+ 2734414..2734419,2734438..2734443)
+ /locus_tag="SARI_02817"
+ /note="ATP-binding site [chemical binding]; other site"
+ /db_xref="CDD:185673"
+ misc_feature order(2733967..2733969,2733973..2733975,2734057..2734059,
+ 2734066..2734068,2734282..2734287,2734294..2734296,
+ 2734348..2734350)
+ /locus_tag="SARI_02817"
+ /note="pantoate-binding site; other site"
+ /db_xref="CDD:185673"
+ misc_feature 2733985..2733996
+ /locus_tag="SARI_02817"
+ /note="HXXH motif; other site"
+ /db_xref="CDD:185673"
+ gene 2735153..2735533
+ /locus_tag="SARI_02818"
+ CDS 2735153..2735533
+ /locus_tag="SARI_02818"
+ /inference="protein motif:BlastProDom:IPR003190"
+ /inference="protein motif:HMMPfam:IPR003190"
+ /inference="protein motif:HMMTigr:IPR003190"
+ /inference="protein motif:superfamily:IPR009010"
+ /inference="similar to AA sequence:INSD:ABB60279.1"
+ /note="Converts L-aspartate to beta-alanine and provides
+ the major route of beta-alanine production in bacteria.
+ Beta-alanine is essential for the biosynthesis of
+ pantothenate (vitamin B5)"
+ /codon_start=1
+ /transl_table=11
+ /product="aspartate alpha-decarboxylase"
+ /protein_id="YP_001571808.1"
+ /db_xref="GI:161504696"
+ /db_xref="InterPro:IPR003190"
+ /db_xref="InterPro:IPR009010"
+ /translation="MIRTMLQGKLHRVKVTQADLHYEGSCAIDQDFLDAAGILENEAI
+ DIWNVSNGKRFSTYAIAAERGSKIISVNGAAAHCASVGDIVIIASFVTMSDEEARTWH
+ PNVAYFEGDNEMKRTAKAIPVQVA"
+ misc_feature 2735159..2735488
+ /locus_tag="SARI_02818"
+ /note="Aspartate alpha-decarboxylase or L-aspartate
+ 1-decarboxylase, a pyruvoyl group-dependent decarboxylase
+ in beta-alanine production; Region: Asp_decarbox; cd06919"
+ /db_xref="CDD:132994"
+ misc_feature order(2735159..2735173,2735177..2735179,2735183..2735188,
+ 2735210..2735221,2735261..2735263,2735267..2735269,
+ 2735276..2735281,2735291..2735293,2735297..2735299,
+ 2735306..2735308,2735312..2735326,2735372..2735377,
+ 2735381..2735386,2735408..2735410,2735420..2735428,
+ 2735453..2735455)
+ /locus_tag="SARI_02818"
+ /note="tetramerization interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:132994"
+ misc_feature order(2735177..2735179,2735183..2735185,2735222..2735227,
+ 2735324..2735326)
+ /locus_tag="SARI_02818"
+ /note="active site"
+ /db_xref="CDD:132994"
+ gene complement(2735539..2736768)
+ /locus_tag="SARI_02819"
+ CDS complement(2735539..2736768)
+ /locus_tag="SARI_02819"
+ /inference="protein motif:HMMPfam:IPR002509"
+ /inference="similar to AA sequence:REFSEQ:NP_459184.1"
+ /note="'KEGG: azo:azo2324 1.3e-19 putative polysaccharide
+ deacetylase;
+ COG: COG0726 Predicted xylanase/chitin deacetylase;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571809.1"
+ /db_xref="GI:161504697"
+ /db_xref="InterPro:IPR002509"
+ /translation="MVMRVVLILLFFFSGNVCAALPARYMQTTKDAAIWSQIGDKMVT
+ VGNIHAGQILFVKPIAVDYYAFKFGFGVGFIDKGHLGPVQGKQKVEDSLGDLNKPLIN
+ QNLVTWKDTPVYNAPDISSAPFGVLVDNLRYPIISKLTGRLHQTWYQIRIGDRLAYIS
+ ALDAQEDNGIPILTYHHILRDEENTRFRHTSTTTSVRAFSNQMTWLRERGYATLTMYQ
+ LEDYLHNRANFPARAVVITFDDGLKSVSRYAYPVLKQYGMKATAFIISSRIKRHPQKW
+ APKSLQFMSVSELRKLSDVFDFQSHTHFLHRVDGYRHPILYSRSYHNILFDFERSRRA
+ LVQFNPHVLYLSYPFGGYNATAIKAAKNAGFHLAVTTVKGKVKPGDNPFLLKRLYILR
+ TDSLETMSRLISNQPQG"
+ misc_feature complement(2735572..2736081)
+ /locus_tag="SARI_02819"
+ /note="Putative catalytic polysaccharide deacetylase
+ domain of uncharacterized protein yadE and similar
+ proteins; Region: CE4_yadE_5s; cd10966"
+ /db_xref="CDD:213024"
+ misc_feature complement(order(2735719..2735727,2735851..2735853,
+ 2735866..2735868,2736049..2736054))
+ /locus_tag="SARI_02819"
+ /note="putative active site [active]"
+ /db_xref="CDD:213024"
+ misc_feature complement(order(2735851..2735853,2735866..2735868,
+ 2736049..2736051))
+ /locus_tag="SARI_02819"
+ /note="putative metal binding site [ion binding]; other
+ site"
+ /db_xref="CDD:213024"
+ gene complement(2736829..2737269)
+ /locus_tag="SARI_02820"
+ CDS complement(2736829..2737269)
+ /locus_tag="SARI_02820"
+ /inference="protein motif:Gene3D:IPR004701"
+ /inference="protein motif:HMMPfam:IPR004701"
+ /inference="protein motif:superfamily:IPR004701"
+ /inference="similar to AA sequence:INSD:AAO67911.1"
+ /note="'KEGG: sty:STY0196 3.1e-73 yadI; putative PTS
+ system IIA component K02821;
+ COG: COG2893 Phosphotransferase system,
+ mannose/fructose-specific component IIA;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571810.1"
+ /db_xref="GI:161504698"
+ /db_xref="InterPro:IPR004701"
+ /translation="MLGWVITCHDDRAQDMLDCLEKKNGPLAQCRAVNFWRGLSSNML
+ SRMMCDALHATDSGKGVIFLTDIAGAAPYRVASLMSHKHSQCEVISGVSYSLMEEMLP
+ LRESMSSSAFRDQIVALGAPDVTSLWHQQQKNPPFVLLHDLYEF"
+ misc_feature complement(2736910..2737263)
+ /locus_tag="SARI_02820"
+ /note="PTS_IIA, PTS system, mannose/sorbose specific IIA
+ subunit. The bacterial phosphoenolpyruvate: sugar
+ phosphotransferase system (PTS) is a multi-protein system
+ involved in the regulation of a variety of metabolic and
+ transcriptional processes. This family...; Region:
+ PTS_IIA_man; cd00006"
+ /db_xref="CDD:237978"
+ misc_feature complement(order(2736964..2736966,2737057..2737059,
+ 2737165..2737167,2737198..2737203,2737243..2737245))
+ /locus_tag="SARI_02820"
+ /note="active pocket/dimerization site; other site"
+ /db_xref="CDD:237978"
+ misc_feature complement(order(2737057..2737059,2737072..2737074,
+ 2737243..2737245))
+ /locus_tag="SARI_02820"
+ /note="active site"
+ /db_xref="CDD:237978"
+ misc_feature complement(2737243..2737245)
+ /locus_tag="SARI_02820"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:237978"
+ gene complement(2737374..2738144)
+ /locus_tag="SARI_02821"
+ CDS complement(2737374..2738144)
+ /locus_tag="SARI_02821"
+ /inference="protein motif:HMMPfam:IPR013525"
+ /inference="similar to AA sequence:REFSEQ:YP_149521.1"
+ /note="'COG: COG0842 ABC-type multidrug transport system,
+ permease component;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571811.1"
+ /db_xref="GI:161504699"
+ /db_xref="InterPro:IPR013525"
+ /translation="MMQLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGN
+ LIGSRIGEMHGFSYMQFIVPGLIMMAVITNSYANVASSFFSAKFQRNIEELLVAPVPT
+ HVIIAGFVGGGVARGLCVGILVTAISLFFVPFQVYSWIFVALTLILTAILFSLAGLLN
+ AVFAKTFDDISLIPTFVLTPLTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGF
+ LGIHDVPLVTTFGVLVIFIAAFYLLCWSLIQRGRGLRS"
+ misc_feature complement(2737377..2738144)
+ /locus_tag="SARI_02821"
+ /note="inner membrane transport permease; Provisional;
+ Region: PRK15066"
+ /db_xref="CDD:237896"
+ misc_feature complement(2737380..2738144)
+ /locus_tag="SARI_02821"
+ /note="ABC-type multidrug transport system, permease
+ component [Defense mechanisms]; Region: COG0842"
+ /db_xref="CDD:223912"
+ gene complement(2738141..2739067)
+ /locus_tag="SARI_02822"
+ CDS complement(2738141..2739067)
+ /locus_tag="SARI_02822"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:REFSEQ:YP_215159.1"
+ /note="'KEGG: pen:PSEEN1596 9.8e-102 ABC transporter,
+ ATP-binding protein;
+ COG: COG1131 ABC-type multidrug transport system, ATPase
+ component;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571812.1"
+ /db_xref="GI:161504700"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MTIALELQQVKKTYPGGVQALRGIDLQVEAGDFYALLGPNGAGK
+ STTIGIISSLVNKTSGRVNVFGYDLEKDVVNAKRQLGLVPQEFNFNPFETVQQIVVNQ
+ AGYYGVEYKEAVLRSEKYLKQLDLWEKRNERARMLSGGMKRRLMIARALMHEPKLLIL
+ DEPTAGVDIELRRSMWGFLKDLNAKGTTIILTTHYLEEAEMLCRNIGIIQHGELVENT
+ SMKNLLSKLKSETFILDLAPKSPLPKLAGYQYRLVDTSTLEVEVLREQGINSVFSQLS
+ EQGVQVLSMRNKANRLEELFVSLVHEKQGDRA"
+ misc_feature complement(2738162..2739067)
+ /locus_tag="SARI_02822"
+ /note="ABC-type multidrug transport system, ATPase
+ component [Defense mechanisms]; Region: CcmA; COG1131"
+ /db_xref="CDD:224054"
+ misc_feature complement(2738426..2739055)
+ /locus_tag="SARI_02822"
+ /note="ATP-binding cassette domain of the drug resistance
+ transporter and related proteins, subfamily A; Region:
+ ABC_DR_subfamily_A; cd03230"
+ /db_xref="CDD:213197"
+ misc_feature complement(2738933..2738956)
+ /locus_tag="SARI_02822"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213197"
+ misc_feature complement(order(2738486..2738488,2738582..2738587,
+ 2738813..2738815,2738930..2738938,2738942..2738947))
+ /locus_tag="SARI_02822"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213197"
+ misc_feature complement(2738813..2738824)
+ /locus_tag="SARI_02822"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213197"
+ misc_feature complement(2738630..2738659)
+ /locus_tag="SARI_02822"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213197"
+ misc_feature complement(2738582..2738599)
+ /locus_tag="SARI_02822"
+ /note="Walker B; other site"
+ /db_xref="CDD:213197"
+ misc_feature complement(2738564..2738575)
+ /locus_tag="SARI_02822"
+ /note="D-loop; other site"
+ /db_xref="CDD:213197"
+ misc_feature complement(2738480..2738500)
+ /locus_tag="SARI_02822"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213197"
+ gene 2739176..2739838
+ /locus_tag="SARI_02823"
+ CDS 2739176..2739838
+ /locus_tag="SARI_02823"
+ /inference="protein motif:Gene3D:IPR001765"
+ /inference="protein motif:HMMPfam:IPR001765"
+ /inference="protein motif:ScanRegExp:IPR001765"
+ /inference="protein motif:superfamily:IPR001765"
+ /inference="similar to AA sequence:INSD:AAL19135.1"
+ /note="catalyzes the interconversion of bicarbonate and
+ carbon dioxide"
+ /codon_start=1
+ /transl_table=11
+ /product="carbonic anhydrase"
+ /protein_id="YP_001571813.1"
+ /db_xref="GI:161504701"
+ /db_xref="InterPro:IPR001765"
+ /translation="MKDIDTLISNNALWSKMLVEEDPGFFEKLAQAQKPRFLWIGCSD
+ SRVPAERLTGLEPGELFVHRNVANLVIHTDLNCLSVVQYAVDVLEVEHIIICGHSGCG
+ GIKAAVENPELGLINNWLLHIRDIWLKHSSLLGKMPEEQRLDALYELNVMEQVYNLGH
+ STIMQSAWKRRQNVTIHGWAYSINDGLLRDLDVTATNRETLENGYHKGISALSLKYIN
+ HQ"
+ misc_feature 2739206..2739748
+ /locus_tag="SARI_02823"
+ /note="Carbonic anhydrases (CA) are zinc-containing
+ enzymes that catalyze the reversible hydration of carbon
+ dioxide in a two-step mechanism in which the nucleophilic
+ attack of a zinc-bound hydroxide ion on carbon dioxide is
+ followed by the regeneration of an...; Region:
+ beta_CA_cladeA; cd00883"
+ /db_xref="CDD:238448"
+ misc_feature order(2739272..2739274,2739278..2739280,2739299..2739301,
+ 2739305..2739313,2739347..2739349,2739356..2739358,
+ 2739422..2739424,2739437..2739439,2739467..2739469,
+ 2739476..2739478,2739716..2739718)
+ /locus_tag="SARI_02823"
+ /note="active site clefts [active]"
+ /db_xref="CDD:238448"
+ misc_feature order(2739299..2739301,2739305..2739307,2739467..2739469,
+ 2739476..2739478)
+ /locus_tag="SARI_02823"
+ /note="zinc binding site [ion binding]; other site"
+ /db_xref="CDD:238448"
+ misc_feature order(2739302..2739313,2739317..2739319,2739323..2739328,
+ 2739332..2739334,2739347..2739355,2739359..2739361,
+ 2739365..2739367,2739407..2739412,2739419..2739424,
+ 2739530..2739532,2739716..2739718,2739722..2739727,
+ 2739731..2739733,2739737..2739739)
+ /locus_tag="SARI_02823"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238448"
+ gene complement(2739915..2740463)
+ /locus_tag="SARI_02824"
+ CDS complement(2739915..2740463)
+ /locus_tag="SARI_02824"
+ /inference="protein motif:HMMPfam:IPR000836"
+ /inference="protein motif:HMMTigr:IPR005904"
+ /inference="protein motif:ScanRegExp:IPR002375"
+ /inference="similar to AA sequence:INSD:AAX64076.1"
+ /note="'KEGG: sec:SC0170 2.4e-91 hpt; hypoxanTHIne
+ phosphoribosyltransferase K00760;
+ COG: COG0634 HypoxanTHIne-guanine
+ phosphoribosyltransferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypoxanthine-guanine phosphoribosyltransferase"
+ /protein_id="YP_001571814.1"
+ /db_xref="GI:161504702"
+ /db_xref="InterPro:IPR000836"
+ /db_xref="InterPro:IPR002375"
+ /db_xref="InterPro:IPR005904"
+ /translation="MVIKMKHTVEVMIPEAEIKARIAELGRQITERYKDSGSEMVLVG
+ LLRGSFMFMADLCREVQIPHEVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIV
+ EDIIDSGNTLSKVREILGLREPKSLAICTLLDKPSRREVDVPVEFIGFSIPDEFVVGY
+ GIDYAQRYRHLPYVGKVVLLDE"
+ misc_feature complement(2740044..2740391)
+ /locus_tag="SARI_02824"
+ /note="Phosphoribosyl transferase (PRT)-type I domain;
+ Region: PRTases_typeI; cd06223"
+ /db_xref="CDD:206754"
+ misc_feature complement(order(2740059..2740061,2740131..2740145,
+ 2740149..2740157,2740320..2740322,2740326..2740328))
+ /locus_tag="SARI_02824"
+ /note="active site"
+ /db_xref="CDD:206754"
+ gene 2740657..2743050
+ /locus_tag="SARI_02825"
+ CDS 2740657..2743050
+ /locus_tag="SARI_02825"
+ /inference="protein motif:HMMPfam:IPR002372"
+ /inference="protein motif:HMMSmart:IPR002372"
+ /inference="protein motif:ScanRegExp:IPR001479"
+ /inference="protein motif:superfamily:IPR011047"
+ /note="'KEGG: stm:STM0169 0. gcd; glucose dehydrogenase
+ K00117;
+ COG: COG4993 Glucose dehydrogenase;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="glucose dehydrogenase"
+ /protein_id="YP_001571815.1"
+ /db_xref="GI:161504703"
+ /db_xref="InterPro:IPR001479"
+ /db_xref="InterPro:IPR002372"
+ /db_xref="InterPro:IPR011047"
+ /translation="MAENNARSPRLLVTLTALFAALCGLYLLIGGVWLVAIGGSWYYP
+ IVGVVMLAVAGLLWRSKRAALWLYAALLLATMIWGVWEVGFDFWALTPRSDILVFFGI
+ WLILPFVWHRLVVPSRGAVGALVVALLISGGILTWAGFNDPQEINGTLRADATPAAET
+ SSPIADEDWPAYGRNQEGQRYSPLKQINADNVHQLKEAWVFRTGDLKQPNDPGEITNE
+ VTPIKVGDTLYLCTAHQRLFALDAANGKEKWHFDPQLKTNESFQHVTCRGVSYHEAKA
+ DTASPEVIADCPRRIILPVNDGRLFAVNAETGKLCETFANKGVLNLQTNMPDTTPGLY
+ EPTSPPIITDKTIVIAGSVTDNFSTRETSGVIRGFDVNTGKLMWAFDPGAKDPNAIPS
+ DQHSFTFNSPNSWAPAAYDAKLDLVYLPMGVTTPDIWGGNRTPEQERYASSILALNAS
+ TGKLAWSYQTVHHDLWDMDLPAQPTLADITVDGKTVPVIYAPAKTGNIFVLDRRNGEL
+ IVPAPETPVPQGAAKGDYVAKTQPFSDLTFRPKKDLSGADMWGATMFDQLVCRVMFHQ
+ LRYEGIFTPPSEQGTLVFPGNLGMFEWGGISVDPDRQVAIANPMALPFVSRLIPRGPG
+ NPMEPPKDAKGTGTEAGIQPQYGVPFGVTLNPFLSPFGLPCKQPAWGYISALDLKTNE
+ IVWKKRIGTPRDSMPFPLPVPVPFNMGMPMLGGPISTAGNVLFIAATADNYLRAYNMS
+ NGEKLWQGRLPAGGQATPMTYEVNGKQYVVVSAGGHGSFGTKMGDYIVAYALPDDAK"
+ misc_feature 2740753..2743035
+ /locus_tag="SARI_02825"
+ /note="membrane-bound PQQ-dependent dehydrogenase,
+ glucose/quinate/shikimate family; Region: PQQ_membr_DH;
+ TIGR03074"
+ /db_xref="CDD:234101"
+ misc_feature 2741161..2743032
+ /locus_tag="SARI_02825"
+ /note="Membrane-bound PQQ-dependent glucose dehydrogenase;
+ Region: PQQ_mGDH; cd10280"
+ /db_xref="CDD:199838"
+ misc_feature order(2741236..2741244,2741251..2741253,2741371..2741373,
+ 2741377..2741379,2741386..2741394,2741401..2741403,
+ 2741560..2741562,2741566..2741568,2741575..2741583,
+ 2741590..2741592,2741758..2741760,2741764..2741766,
+ 2741773..2741781,2741788..2741790,2741992..2741994,
+ 2741998..2742000,2742007..2742015,2742022..2742024,
+ 2742154..2742156,2742160..2742162,2742169..2742177,
+ 2742184..2742186,2742679..2742681,2742685..2742687,
+ 2742694..2742702,2742709..2742711,2742862..2742864,
+ 2742868..2742870,2742877..2742885,2742892..2742894,
+ 2743021..2743023,2743027..2743029)
+ /locus_tag="SARI_02825"
+ /note="Trp docking motif [polypeptide binding]; other
+ site"
+ /db_xref="CDD:199838"
+ misc_feature order(2741308..2741310,2741437..2741442,2741455..2741457,
+ 2741665..2741667,2741710..2741715,2741869..2741871,
+ 2742136..2742138,2742793..2742795)
+ /locus_tag="SARI_02825"
+ /note="putative active site [active]"
+ /db_xref="CDD:199838"
+ gene complement(2743128..2744738)
+ /locus_tag="SARI_02826"
+ CDS complement(2743128..2744738)
+ /locus_tag="SARI_02826"
+ /inference="protein motif:HMMPfam:IPR011706"
+ /inference="protein motif:HMMPfam:IPR011707"
+ /inference="protein motif:ScanRegExp:IPR002355"
+ /inference="protein motif:superfamily:IPR008972"
+ /inference="similar to AA sequence:SwissProt:Q8ZRS2"
+ /note="laccase; copper-stimulated phenoloxidase and
+ ferroxidase which may be involved in copper
+ detoxification"
+ /codon_start=1
+ /transl_table=11
+ /product="multicopper oxidase"
+ /protein_id="YP_001571816.2"
+ /db_xref="GI:448236265"
+ /db_xref="InterPro:IPR002355"
+ /db_xref="InterPro:IPR008972"
+ /db_xref="InterPro:IPR011706"
+ /db_xref="InterPro:IPR011707"
+ /translation="MLRRDFLKYSVALGVASALPLWSRAAFAAERPALPIPELLTADA
+ SNRMQLIVKAGQSTFAGKNATTWGYNGNLLGPAVQLHKGKSVTVDIYNQLAEDTTLHW
+ HGLEIPGVVDGGPQGIIPAGGTRTVTFTPEQRAATCWIHPHKHGKTGRQVAMGLAGLV
+ LIEDDEIRKLRLPKQWGIDDVPVIIQDKRFSADGQIDYQLDIMTAAVGWFGDTLLTNG
+ AIYPQHSAPKGWLRLRLLNGCNARSLNIAASDRRPLYVIASDGGLLAEPVKVTELPLL
+ MGERFEVLVDISDGKAFDLVTLPVSQMGMAIAPFDKPHPVMRIQPLRITASGTLPDTL
+ TTMPTLPSLEGLTVRNLKLSMDPRLDMMGMQMLMKKYGAQAMSGMDHDSMNAHMQGGN
+ MGHGERDHSNMNHGGMNHSSMGNMNHGGKFDFHNANFINGQVFDMNKPMFAAQKGRHE
+ RWVISGVGDMMLHPFHIHGTQFRILSENGKAPAAHRTGWKDTVRVEGGISEVLVKFDH
+ DAPKEHAYMAHCHLLEHEDTGMMLGFTV"
+ misc_feature complement(2743131..2744738)
+ /locus_tag="SARI_02826"
+ /note="multicopper oxidase; Provisional; Region: PRK10965"
+ /db_xref="CDD:236810"
+ misc_feature complement(2744241..2744585)
+ /locus_tag="SARI_02826"
+ /note="Multicopper oxidase; Region: Cu-oxidase_3;
+ pfam07732"
+ /db_xref="CDD:219542"
+ misc_feature complement(2743131..2743475)
+ /locus_tag="SARI_02826"
+ /note="Multicopper oxidase; Region: Cu-oxidase_2;
+ pfam07731"
+ /db_xref="CDD:219541"
+ gene 2744900..2745286
+ /locus_tag="SARI_02827"
+ CDS 2744900..2745286
+ /locus_tag="SARI_02827"
+ /inference="similar to AA sequence:INSD:ABP59357.1"
+ /note="'COG: NOG09835 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571817.1"
+ /db_xref="GI:161504705"
+ /translation="MLTLTFPDAVVEAMKMFFRPVLFGSLMALCANSYALTESEAEDM
+ ADLTAVFVFLKNDCGYQNLPNSQIRRALVFFAQQNQWDLSNYDTFDMKSLGEDSYRDL
+ SGIGIPVAKKCKALARDSLSLLAYVK"
+ misc_feature <2745023..2745253
+ /locus_tag="SARI_02827"
+ /note="Bacterial chaperone lipoprotein (PulS_OutS);
+ Region: PulS_OutS; cl09898"
+ /db_xref="CDD:245186"
+ gene 2745514..2746374
+ /locus_tag="SARI_02828"
+ CDS 2745514..2746374
+ /locus_tag="SARI_02828"
+ /inference="protein motif:HMMPanther:IPR001045"
+ /inference="protein motif:HMMPfam:IPR001045"
+ /inference="protein motif:HMMTigr:IPR001045"
+ /inference="protein motif:ScanRegExp:IPR001045"
+ /inference="similar to AA sequence:REFSEQ:YP_215153.1"
+ /note="catalyzes the formation of spermidine from
+ putrescine and S-adenosylmethioninamine"
+ /codon_start=1
+ /transl_table=11
+ /product="spermidine synthase"
+ /protein_id="YP_001571818.1"
+ /db_xref="GI:161504706"
+ /db_xref="InterPro:IPR001045"
+ /translation="MAENTMWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFG
+ RVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVE
+ TITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFTLVIDDGVNFVNQTHQTFDVIISDCT
+ DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQDEALDSHRKLSHYFSDVSF
+ YQAAIPTYYGGIMTFAWATDNDAIRHLSSETIQARFHAAGLKCRYYNPAIHAAAFALP
+ QYLHDALSAQ"
+ misc_feature 2745523..2746365
+ /locus_tag="SARI_02828"
+ /note="spermidine synthase; Provisional; Region: PRK00811"
+ /db_xref="CDD:234843"
+ misc_feature 2745754..2746086
+ /locus_tag="SARI_02828"
+ /note="S-adenosylmethionine-dependent methyltransferases
+ (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
+ that use S-adenosyl-L-methionine (SAM or AdoMet) as a
+ substrate for methyltransfer, creating the product
+ S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
+ cd02440"
+ /db_xref="CDD:100107"
+ misc_feature order(2745763..2745783,2745835..2745840,2745928..2745936,
+ 2745985..2745987)
+ /locus_tag="SARI_02828"
+ /note="S-adenosylmethionine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:100107"
+ gene 2746395..2747189
+ /locus_tag="SARI_02829"
+ CDS 2746395..2747189
+ /locus_tag="SARI_02829"
+ /inference="protein motif:HMMPfam:IPR003826"
+ /inference="protein motif:HMMPIR:IPR009165"
+ /inference="similar to AA sequence:INSD:AAO47363.1"
+ /note="S-adenosylmethionine provides the aminopropyl
+ moiety required for spermidine biosynthesis from
+ putrescine"
+ /codon_start=1
+ /transl_table=11
+ /product="S-adenosylmethionine decarboxylase"
+ /protein_id="YP_001571819.1"
+ /db_xref="GI:161504707"
+ /db_xref="InterPro:IPR003826"
+ /db_xref="InterPro:IPR009165"
+ /translation="MKKLKLHGFNNLTKSLSFCIYDICYAKTAEERDGYIAYIDELYN
+ ANRLTEILSETCSIIGANILNIARQDYEPQGASVTILVSEEPMDPKLIDQTEHPGPLP
+ ETVVAHLDKSHICVHTYPESHPEGGLCTFRADIEVSTCGVISPLKALNYLIHQLESDI
+ VTIDYRVRGFTRDVNGMKHFIDHEINSIQNFMSEDMKSLYDMVDVNVYQENIFHTKML
+ LKEFDLKHYMFHTKPEDLTETERQEITAALWKEMREIYYGRNMPAV"
+ misc_feature 2746395..2747186
+ /locus_tag="SARI_02829"
+ /note="S-adenosylmethionine decarboxylase; Provisional;
+ Region: PRK05462"
+ /db_xref="CDD:235480"
+ gene complement(2747245..2747850)
+ /gene="lacA"
+ /locus_tag="SARI_02830"
+ CDS complement(2747245..2747850)
+ /gene="lacA"
+ /locus_tag="SARI_02830"
+ /inference="protein motif:ScanRegExp:IPR001451"
+ /inference="protein motif:superfamily:IPR011004"
+ /inference="similar to AA sequence:REFSEQ:YP_851533.1"
+ /note="transfers acetyl group from acetyl-CoA to the
+ 6-hydroxyl of galactopyranosides; exact physiological role
+ is unknown"
+ /codon_start=1
+ /transl_table=11
+ /product="galactoside O-acetyltransferase"
+ /protein_id="YP_001571820.1"
+ /db_xref="GI:161504708"
+ /db_xref="InterPro:IPR001451"
+ /db_xref="InterPro:IPR011004"
+ /translation="MMLSMREKIKKGMLFTDLTEGLPEERLRGKELMYDYNHTRPSEE
+ NKRRELIAQMFGKIGRNAWIEPPISFSYGKNIYIGDNFYANFNLTIVDDYTVTIGNNV
+ MVAPNVTISVTGHPVHFSLRMQGEMFSFPVTIGNNVWIGSQVVINPGVTIGDNSVIGA
+ GSVVTKDIPPDVVAAGVPCRVLRKITQRDKEYYYRDLKIGP"
+ misc_feature complement(2747248..2747850)
+ /gene="lacA"
+ /locus_tag="SARI_02830"
+ /note="galactoside O-acetyltransferase; Reviewed; Region:
+ lacA; PRK09527"
+ /db_xref="CDD:181930"
+ misc_feature complement(2747305..2747811)
+ /gene="lacA"
+ /locus_tag="SARI_02830"
+ /note="Maltose O-acetyltransferase (MAT) and Galactoside
+ O-acetyltransferase (GAT): MAT and GAT catalyze the
+ CoA-dependent acetylation of the 6-hydroxyl group of their
+ respective sugar substrates. MAT acetylates maltose and
+ glucose exclusively at the C6...; Region: LbH_MAT_GAT;
+ cd03357"
+ /db_xref="CDD:100047"
+ misc_feature complement(order(2747311..2747313,2747317..2747328,
+ 2747353..2747358,2747362..2747364,2747371..2747376,
+ 2747410..2747412,2747425..2747430,2747434..2747436,
+ 2747470..2747472,2747476..2747481,2747500..2747502,
+ 2747506..2747508,2747512..2747514,2747518..2747520,
+ 2747536..2747538,2747542..2747544,2747572..2747574,
+ 2747578..2747580,2747596..2747598,2747602..2747604,
+ 2747638..2747640,2747773..2747775,2747800..2747802))
+ /gene="lacA"
+ /locus_tag="SARI_02830"
+ /note="active site"
+ /db_xref="CDD:100047"
+ misc_feature complement(order(2747470..2747472,2747476..2747481,
+ 2747506..2747508,2747512..2747514,2747542..2747544,
+ 2747572..2747574,2747578..2747580,2747596..2747598,
+ 2747602..2747604,2747638..2747640,2747773..2747775,
+ 2747800..2747802))
+ /gene="lacA"
+ /locus_tag="SARI_02830"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:100047"
+ misc_feature complement(order(2747320..2747322,2747356..2747358,
+ 2747368..2747373,2747380..2747382,2747386..2747388,
+ 2747410..2747412,2747419..2747427,2747434..2747436,
+ 2747440..2747442,2747461..2747463,2747467..2747469,
+ 2747485..2747490,2747494..2747502,2747506..2747508,
+ 2747518..2747520,2747524..2747526,2747530..2747532,
+ 2747542..2747544,2747548..2747550,2747590..2747595,
+ 2747641..2747646,2747650..2747652,2747728..2747730,
+ 2747749..2747751,2747761..2747763,2747770..2747772))
+ /gene="lacA"
+ /locus_tag="SARI_02830"
+ /note="trimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:100047"
+ misc_feature complement(order(2747317..2747319,2747323..2747328,
+ 2747353..2747358,2747371..2747376,2747410..2747412,
+ 2747425..2747430,2747434..2747436,2747500..2747502,
+ 2747506..2747508,2747512..2747514,2747518..2747520))
+ /gene="lacA"
+ /locus_tag="SARI_02830"
+ /note="CoA binding site [chemical binding]; other site"
+ /db_xref="CDD:100047"
+ gene complement(2747868..2749124)
+ /gene="lacY"
+ /locus_tag="SARI_02831"
+ CDS complement(2747868..2749124)
+ /gene="lacY"
+ /locus_tag="SARI_02831"
+ /inference="protein motif:HMMPfam:IPR000576"
+ /inference="protein motif:HMMTigr:IPR000576"
+ /inference="protein motif:ScanRegExp:IPR000576"
+ /inference="similar to AA sequence:REFSEQ:NP_286084.1"
+ /note="lactose/proton symporter; mediates lactose/proton
+ symport through the membrane by utilizing the proton
+ gradient to drive transport of galactosides; member of
+ major facilitator superfamily; functions as a monomer with
+ 12 transmembrane segments"
+ /codon_start=1
+ /transl_table=11
+ /product="galactoside permease"
+ /protein_id="YP_001571821.1"
+ /db_xref="GI:161504709"
+ /db_xref="InterPro:IPR000576"
+ /translation="MYYLKNTNFWMFGFFFFFYFFIMGAYFPFFPIWLHDINHISKGD
+ TGIIFACISLFSLLFQPVFGLMSDKLGLRKNLLWIITGMLVMFAPFFIYVFGPLLQFN
+ ILLGSIVGGIYLGFIYNAGAPAIEAYIEKASRRSHFEFGRARMFGCGGWALCASIVGV
+ MFTINNEFVFWLGSGCAVILALLLFFSRTDSGSSAVVADAPGANSSPFSLKLALELFK
+ QPKLWFLSLYVVGVSCTYDVFDQQFANFFTSFFASGEQGTRVFGYVTTMGELLNACIM
+ FFAPLIVNRIGGKNALLIAGIIMSVRIIGSSFATTAGEVVILKTLHMFEIPFLIVGCF
+ KYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYEKIGFQGAYLVLGLIALVF
+ TLISAATLSGAGPLAVMRVSQPKSAS"
+ misc_feature complement(2747874..2749124)
+ /gene="lacY"
+ /locus_tag="SARI_02831"
+ /note="galactoside permease; Reviewed; Region: lacY;
+ PRK09528"
+ /db_xref="CDD:236549"
+ misc_feature complement(2747934..2749010)
+ /gene="lacY"
+ /locus_tag="SARI_02831"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature complement(order(2748039..2748041,2748048..2748050,
+ 2748054..2748056,2748063..2748068,2748075..2748080,
+ 2748111..2748113,2748120..2748125,2748135..2748137,
+ 2748144..2748149,2748156..2748158,2748297..2748299,
+ 2748309..2748311,2748318..2748320,2748330..2748332,
+ 2748342..2748344,2748393..2748395,2748402..2748407,
+ 2748414..2748419,2748426..2748428,2748672..2748674,
+ 2748690..2748695,2748702..2748704,2748711..2748713,
+ 2748747..2748749,2748756..2748761,2748768..2748773,
+ 2748780..2748785,2748933..2748938,2748942..2748947,
+ 2748957..2748959,2748966..2748971,2748978..2748980))
+ /gene="lacY"
+ /locus_tag="SARI_02831"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene complement(2749178..2752261)
+ /gene="lacZ"
+ /locus_tag="SARI_02832"
+ CDS complement(2749178..2752261)
+ /gene="lacZ"
+ /locus_tag="SARI_02832"
+ /inference="protein motif:Gene3D:IPR004199"
+ /inference="protein motif:Gene3D:IPR013781"
+ /inference="protein motif:Gene3D:IPR013812"
+ /inference="protein motif:HMMPfam:IPR004199"
+ /inference="protein motif:HMMPfam:IPR006102"
+ /inference="protein motif:HMMPfam:IPR006103"
+ /inference="protein motif:HMMPfam:IPR006104"
+ /inference="protein motif:ScanRegExp:IPR006101"
+ /inference="protein motif:superfamily:IPR006102"
+ /inference="protein motif:superfamily:IPR008979"
+ /inference="protein motif:superfamily:IPR011013"
+ /note="forms a homotetramer; hydrolyzes lactose
+ disaccharide to galactose and glucose; converts lactose to
+ allolactose which is the natural inducer of the lac
+ operon"
+ /codon_start=1
+ /transl_table=11
+ /product="beta-D-galactosidase"
+ /protein_id="YP_001571822.1"
+ /db_xref="GI:161504710"
+ /db_xref="InterPro:IPR004199"
+ /db_xref="InterPro:IPR006101"
+ /db_xref="InterPro:IPR006102"
+ /db_xref="InterPro:IPR006103"
+ /db_xref="InterPro:IPR006104"
+ /db_xref="InterPro:IPR008979"
+ /db_xref="InterPro:IPR011013"
+ /db_xref="InterPro:IPR013781"
+ /db_xref="InterPro:IPR013812"
+ /translation="MIMTPERDSLAAVLARRDWENPAVTQFNRLTAHPPFCSWRKADD
+ AQRNQYAAQIRSLNGVWKFAWFSSPQAVPENWRLEDLTEAGTINVPSNWQMYGYDSPI
+ YSNITYPFPVNPPCVPAENPTGCYSLTFCMDDDWLTEGQTRIIFDGVNSAFHLWCNGR
+ WVGYGQDSRLPSEFDLSEYLQVGENRLAVLVLRWSDGSYLEDQDMWRMSGIFRDVSLL
+ HKPTTQITDFHLHTHLNDDFTQAVLEAEVRLAGGVNDDLQLVLHLWQGETLAGEARAT
+ PGSEIIDERGGYDDRATLRLNINRPALWSAETPNLYRAVIQLRTADGELIEAEACDVG
+ FRQVRIDKGLLLLNGKPLLIRGTNRHEHHPERGQVMDYDTMVQDILLMKQNNFNAVRC
+ SHYPNHPQWYALCDRYGLYVVDEANIETHGMTPMNRLSDDPDWLPAMSQRVTRMVQRD
+ RNHPSIIIWSLGNESGHGANHDALYRWLKAEDPSRPVQYEGGGADTAATDIICPMYAR
+ VDQDQPFPAVPKWSIKKWLSLPGEQRPLILCEYAHAMGNSFGGFAKYWQAFRQYPRLQ
+ GGFVWDWVDQSLIKYDADGKPWSAYGGDFGDTPNDRQFCMNGLVFADRTPHPALYEAK
+ HVQQFFQFRLLPGEERRIEVQSEYLFRHSDNEILRWMLAQEGNQLASGEVVLDIAPQG
+ RQIILLPAFPQPETAGQLWLTVRVEQPLATSWSEAGHISAWQQWPLEEKLCVSKPTRA
+ SVAPVLTMRDGEFCVTQGNLRWQFCRQQGWLTQFWRDDEAQLLTPLIDQFTRAPLDND
+ IGVSEATRIDPNAWVERWKAAGHYCAEPALLLCDADELADAVLITTAHAWQYQGATLF
+ ISRKTYRIDDHGEMQIDIGVEVASGMPYPARIGLSCQLAQVNERVEWLGLGPHENYPD
+ RLSSACFDRWNLPLDAMYTPYVFPTENGLRCGTRQLRYGAHQWSGDFQFNISRYSQRQ
+ LMETSHRHLLQAEAGVWLNIDGYHMGVGGDDSWSPSVSPEFQLSARHYHYQIAWK"
+ misc_feature complement(2749181..2752255)
+ /gene="lacZ"
+ /locus_tag="SARI_02832"
+ /note="beta-D-galactosidase; Reviewed; Region: lacZ;
+ PRK09525"
+ /db_xref="CDD:236548"
+ misc_feature complement(2751599..2752105)
+ /gene="lacZ"
+ /locus_tag="SARI_02832"
+ /note="Glycosyl hydrolases family 2, sugar binding domain;
+ Region: Glyco_hydro_2_N; pfam02837"
+ /db_xref="CDD:217248"
+ misc_feature complement(2751254..2751589)
+ /gene="lacZ"
+ /locus_tag="SARI_02832"
+ /note="Glycosyl hydrolases family 2; Region:
+ Glyco_hydro_2; pfam00703"
+ /db_xref="CDD:216070"
+ misc_feature complement(2750366..2751202)
+ /gene="lacZ"
+ /locus_tag="SARI_02832"
+ /note="Glycosyl hydrolases family 2, TIM barrel domain;
+ Region: Glyco_hydro_2_C; pfam02836"
+ /db_xref="CDD:217247"
+ misc_feature complement(2749181..2749999)
+ /gene="lacZ"
+ /locus_tag="SARI_02832"
+ /note="Beta galactosidase small chain; Region:
+ Bgal_small_N; pfam02929"
+ /db_xref="CDD:111779"
+ unsure 2749878..2749902
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(2752412..2753530)
+ /gene="lacI"
+ /locus_tag="SARI_02833"
+ CDS complement(2752412..2753530)
+ /gene="lacI"
+ /locus_tag="SARI_02833"
+ /inference="protein motif:HMMPfam:IPR000843"
+ /inference="protein motif:HMMPfam:IPR001761"
+ /inference="protein motif:HMMSmart:IPR000843"
+ /inference="protein motif:ScanRegExp:IPR000843"
+ /inference="protein motif:superfamily:IPR010982"
+ /inference="similar to AA sequence:REFSEQ:ZP_00702685.1"
+ /note="transcriptional repressor of lac operon; forms a
+ homotetramer as a dimer of dimers; binds specific sites in
+ lac operon resulting in DNA looping between the operators;
+ binds allolactose as inducer"
+ /codon_start=1
+ /transl_table=11
+ /product="lac repressor"
+ /protein_id="YP_001571823.1"
+ /db_xref="GI:161504711"
+ /db_xref="InterPro:IPR000843"
+ /db_xref="InterPro:IPR001761"
+ /db_xref="InterPro:IPR010982"
+ /translation="MWHDSARINEFRVLNVKPVTLYDVANHAGVSYQTVSRVVNQASH
+ VSAKTREKVEAAMAELNYIPNHAAQQLAGKRVPLIGVATANLALHAPSQIVAAIKSRA
+ DQAGASVVIAMVERNGVEACKIAVHNLLARRVTGIIINFPLEEDAALEVVSAAGNVPV
+ LFLDVSEQTPVNSIVFSHDEGAKLGVEHLVAHGHQRIALLAGPASSVSARLRLADWRK
+ HLQHRQITPVAVLEGDWSAMSGFQQTQQMLNSGIIPTAMLIANDQMALGVMRAITEFG
+ LRVATDISLIGYDDTEDSSCYIPPLTTIRQDFAQLGRGSVDRILQIAAGDSVSQSQRL
+ PVTLIERKTVCAPQTDRASPQALAEALMQLARQVSRLS"
+ misc_feature complement(2752466..2753491)
+ /gene="lacI"
+ /locus_tag="SARI_02833"
+ /note="lac repressor; Reviewed; Region: lacI; PRK09526"
+ /db_xref="CDD:181929"
+ misc_feature complement(2753312..2753467)
+ /gene="lacI"
+ /locus_tag="SARI_02833"
+ /note="Helix-turn-helix (HTH) DNA binding domain of the
+ LacI family of transcriptional regulators; Region:
+ HTH_LacI; cd01392"
+ /db_xref="CDD:143331"
+ misc_feature complement(order(2753315..2753320,2753324..2753329,
+ 2753336..2753338,2753345..2753347,2753384..2753386,
+ 2753393..2753398,2753411..2753413,2753420..2753425,
+ 2753429..2753443,2753465..2753467))
+ /gene="lacI"
+ /locus_tag="SARI_02833"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:143331"
+ misc_feature complement(2753318..2753347)
+ /gene="lacI"
+ /locus_tag="SARI_02833"
+ /note="domain linker motif; other site"
+ /db_xref="CDD:143331"
+ misc_feature complement(2752502..2753296)
+ /gene="lacI"
+ /locus_tag="SARI_02833"
+ /note="Ligand-binding domain of DNA transcription
+ repressor LacI specific for lactose, a member of the
+ LacI-GalR family of bacterial transcription regulators;
+ Region: PBP1_LacI; cd01574"
+ /db_xref="CDD:107259"
+ misc_feature complement(order(2752664..2752666,2752748..2752750,
+ 2752895..2752897,2752907..2752909,2753003..2753005,
+ 2753039..2753041,2753111..2753113,2753249..2753251,
+ 2753258..2753263,2753279..2753281))
+ /gene="lacI"
+ /locus_tag="SARI_02833"
+ /note="ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:107259"
+ misc_feature complement(order(2752721..2752723,2752733..2752735,
+ 2752742..2752744,2752817..2752819,2753135..2753137,
+ 2753192..2753194,2753198..2753200,2753207..2753209,
+ 2753234..2753236,2753243..2753245,2753255..2753257,
+ 2753264..2753266,2753276..2753278))
+ /gene="lacI"
+ /locus_tag="SARI_02833"
+ /note="dimerization interface (open form) [polypeptide
+ binding]; other site"
+ /db_xref="CDD:107259"
+ misc_feature complement(order(2752721..2752723,2752742..2752744,
+ 2753132..2753134,2753234..2753236,2753252..2753254,
+ 2753270..2753272))
+ /gene="lacI"
+ /locus_tag="SARI_02833"
+ /note="dimerization interface (closed form) [polypeptide
+ binding]; other site"
+ /db_xref="CDD:107259"
+ gene complement(2753585..2753947)
+ /locus_tag="SARI_02834"
+ CDS complement(2753585..2753947)
+ /locus_tag="SARI_02834"
+ /inference="protein motif:BlastProDom:IPR008249"
+ /inference="protein motif:HMMPfam:IPR008249"
+ /inference="similar to AA sequence:INSD:AAN78642.1"
+ /note="'COG: COG3112 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571824.2"
+ /db_xref="GI:448236266"
+ /db_xref="InterPro:IPR008249"
+ /translation="MDYEFLRDVTGRVLVRMSMGHEVVGHWFNEEVKENLALLDEVEQ
+ AALTVKGSERSWQRAGHEYTLWMDGEEVMIRANQLDFSGDEMEEGMSYYDEESLSLCG
+ VEDFLRVVVAYRNFMQQK"
+ misc_feature complement(2753588..2753947)
+ /locus_tag="SARI_02834"
+ /note="hypothetical protein; Provisional; Region:
+ PRK05248"
+ /db_xref="CDD:235372"
+ gene complement(2754097..2756721)
+ /locus_tag="SARI_02835"
+ CDS complement(2754097..2756721)
+ /locus_tag="SARI_02835"
+ /inference="protein motif:BlastProDom:IPR001030"
+ /inference="protein motif:HMMPanther:IPR004406"
+ /inference="protein motif:HMMPfam:IPR001030"
+ /inference="protein motif:HMMPfam:IPR004406"
+ /inference="protein motif:HMMPIR:IPR004406"
+ /inference="protein motif:HMMTigr:IPR004406"
+ /inference="protein motif:ScanRegExp:IPR001030"
+ /inference="protein motif:superfamily:IPR001030"
+ /note="catalyzes the conversion of citrate to isocitrate
+ and the conversion of 2-methylaconitate to
+ 2-methylisocitrate"
+ /codon_start=1
+ /transl_table=11
+ /product="bifunctional aconitate hydratase
+ 2/2-methylisocitrate dehydratase"
+ /protein_id="YP_001571825.1"
+ /db_xref="GI:161504713"
+ /db_xref="InterPro:IPR001030"
+ /db_xref="InterPro:IPR004406"
+ /translation="MTMRARRTVVLEEYRKHVAERAAEGIVPKPLDATQMAALVELLK
+ NPPAGEEEFLLDLLTHRVPPGVDEAAYVKAGFLAAVAKGETTSPLIAPEKAIELLGTM
+ QGGYNIHPLIDALDDAKLAPIAAKALSHTLLMFDNFYDVEEKAKAGNGYAQQVMQSWG
+ DAEWFLSRPPLAEKITVTVFKVTGETNTDDLSPAPDAWSRPDIPLHAQAMLKNAREGI
+ DPDQPGIVGPIKQIEALAKKGFPLAYVGDVVGTGSSRKSATNSVLWFMGDDIPFVPNK
+ RGGGLCLGGKIAPIFFNTMEDAGALPIEVDVSNLNMGDVIDVYPYKGEVRNHETDELL
+ ATFELKTDVLIDEVRAGGRIPLIIGRGLTTKAREALGLPHSDVFRQAKDVAESSRGFS
+ LAQKMVGRACGVKGIRPGAYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQS
+ FCHTAAYPKPVDVTTHHTLPDFIMNRGGVSLRPGDGVIHSWLNRMLLPDTVGTGGDSH
+ TRFPIGISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGITLRDLVHAIPLYA
+ IKQGLLTVEKKGKKNIFSGRILEIEGLPDLKVEQAFELTDASAERSAAGCTIKLNKEP
+ IIEYLTSNIVLLKWMIAEGYGDRRTLERRIQGMEKWLADPQLLEADADAEYAAVIDID
+ LADIKEPILCAPNDPDDARLLSDVQGEKIDEVFIGSCMTNIGHFRAAGKLLDNHKGQL
+ PTRLWVAPPTRMDAAQLTEEGYYSVFGKSGARIEIPGCSLCMGNQARVADGATVVSTS
+ TRNFPNRLGTGANVFLASAELAAVAALIGKLPTPEEYQTFVAQVDKTAVDTYRYLNFD
+ QLSQYTEKADGVIFQTAV"
+ misc_feature complement(2754157..2756691)
+ /locus_tag="SARI_02835"
+ /note="bifunctional aconitate hydratase
+ 2/2-methylisocitrate dehydratase; Validated; Region:
+ PRK09238"
+ /db_xref="CDD:236424"
+ misc_feature complement(2755762..2756184)
+ /locus_tag="SARI_02835"
+ /note="Aconitase B swivel domain. Aconitate hydratase B is
+ involved in energy metabolism as part of the TCA cycle. It
+ catalyses the formation of cis-aconitate from citrate.
+ This is the aconitase swivel domain, which undergoes
+ swivelling conformational change in...; Region:
+ AcnB_Swivel; cd01576"
+ /db_xref="CDD:238808"
+ misc_feature complement(2755957..2755965)
+ /locus_tag="SARI_02835"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:238808"
+ misc_feature complement(2754235..2755545)
+ /locus_tag="SARI_02835"
+ /note="Aconitate hydratase B catalyses the formation of
+ cis-aconitate from citrate as part of the TCA cycle;
+ Region: AcnB; cd01581"
+ /db_xref="CDD:153131"
+ misc_feature complement(order(2754307..2754309,2754322..2754324,
+ 2754376..2754378,2755201..2755206,2755444..2755446,
+ 2755453..2755455))
+ /locus_tag="SARI_02835"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:153131"
+ misc_feature complement(order(2754325..2754327,2754376..2754381,
+ 2754388..2754390,2754565..2754567,2755198..2755200))
+ /locus_tag="SARI_02835"
+ /note="ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:153131"
+ gene 2757086..2758666
+ /locus_tag="SARI_02836"
+ CDS 2757086..2758666
+ /locus_tag="SARI_02836"
+ /inference="similar to AA sequence:INSD:AAL19121.1"
+ /note="'COG: NOG06276 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571826.1"
+ /db_xref="GI:161504714"
+ /translation="MTLPFKPLIALVCSAGLFAASGVLYVKSRAPEAPAQATAPAPEK
+ MQASVPAPVAKTTFTTAQIDQWVAPVALYPDSLLSQVLMASTYPANVVQAVQWSRDNP
+ TLQGDAAIQAVASQPWDPSVKSLVAFPQLMALMGENPQWVQNLGDAFLAQPQDVMDAV
+ QRLRLLAQQTGSLKSTPQQTVTSVPKSSASTAVTTTTTTSASTPAASSTVIKIEPANP
+ QVVYVPNYNPATVYGAWPNTAYPPVYLPPPPGQQFADSFVKGFGYSLGVATTYALFSS
+ IDWDDDDHHHHDDDYHHDDDYRHDGNGYQHNGDNININVNNFNRISGQNLPGQTMGWQ
+ HNPGWRNAVPYPNSTVAQRFHPTSVIGGQAPVSRDNQRQTAMAQFQQRSHTADASLPA
+ ASARDAQRKAASQQLNEIARRNNYRGYDNQHDSARRQTAQHHSTTLKSQTQQHPLSQQ
+ QRNAAHQRIASSTPQQRQAFRQHMHANVFSGNDSRSPSWQSQQLRGQESRQGGHLNTE
+ QRAAAREHFSEHHEFHRR"
+ misc_feature 2757257..2757913
+ /locus_tag="SARI_02836"
+ /note="Protein of unknown function (DUF3300); Region:
+ DUF3300; pfam11737"
+ /db_xref="CDD:221195"
+ gene 2758679..2759470
+ /locus_tag="SARI_02837"
+ CDS 2758679..2759470
+ /locus_tag="SARI_02837"
+ /inference="similar to AA sequence:INSD:AAL19120.1"
+ /note="'COG: NOG09806 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571827.1"
+ /db_xref="GI:161504715"
+ /translation="MKKVMLSALLLSLPLLGYAQERFPSPEAAASAFAAAVAGKNETQ
+ LTALLGDDWRQFLPPEGADPEAVARFNRDWREGHRIVQKDNTAHLNVGREDWQLPVPM
+ VKEAGGWRFDMAAAQDEILTRAIGRNELSTLQAMHTYVDAQQDYYLQNHRWAHRIISS
+ EGKKDGLYWPMKAGEAPSPLGPNFSPAAPDEGYHGYHFRIINDNDGRGVALLAWPMHY
+ GETGVMSFLVNQDDRIYQADLGKDTESNVRAITRFAPDARWQAAE"
+ misc_feature 2758736..2759464
+ /locus_tag="SARI_02837"
+ /note="Protein of unknown function (DUF2950); Region:
+ DUF2950; pfam11453"
+ /db_xref="CDD:221113"
+ gene complement(2759511..2759776)
+ /locus_tag="SARI_02838"
+ /note="Pseudogene compared to gi|16763545|ref|NP_459160.1|
+ putative outer membrane protein [Salmonella typhimurium
+ LT2]"
+ gene complement(2760135..2761562)
+ /locus_tag="SARI_02839"
+ CDS complement(2760135..2761562)
+ /locus_tag="SARI_02839"
+ /inference="protein motif:BlastProDom:IPR001327"
+ /inference="protein motif:Gene3D:IPR004099"
+ /inference="protein motif:HMMPfam:IPR001327"
+ /inference="protein motif:HMMPfam:IPR004099"
+ /inference="protein motif:HMMPfam:IPR013027"
+ /inference="protein motif:HMMTigr:IPR006258"
+ /inference="protein motif:ScanRegExp:IPR012999"
+ /inference="similar to AA sequence:REFSEQ:NP_454768.1"
+ /note="E3 component of pyruvate and 2-oxoglutarate
+ dehydrogenase complex; catalyzes the oxidation of
+ dihydrolipoamide to lipoamide"
+ /codon_start=1
+ /transl_table=11
+ /product="dihydrolipoamide dehydrogenase"
+ /protein_id="YP_001571828.1"
+ /db_xref="GI:161504716"
+ /db_xref="InterPro:IPR001327"
+ /db_xref="InterPro:IPR004099"
+ /db_xref="InterPro:IPR006258"
+ /db_xref="InterPro:IPR012999"
+ /db_xref="InterPro:IPR013027"
+ /translation="MMSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYNTLGG
+ VCLNVGCIPSKALLHVAKVIEEAKALAEHGIVFGEPKTDIDKIRTWKEKVITQLTGGL
+ AGMAKGRKVKVVNGLGKFTGANTLEVEGENGKTVINFDNAIIAAGSRPIQLPFIPHED
+ PRVWDSTDALELKEVPKRMLVMGGGIIGLEMGTVYHALGSEIDVVEMFDQVIPAADKD
+ IVKVFTKRIGKKFNLMLETKVTAVEAKEDGIYVSMEGKKAPAEAQRYDAVLVAIGRVP
+ NGKNLDAGKAGVEVDDRGFIRVDKQLRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAE
+ VIAGKKHYFDPKVIPSIAYTEPEVAWVGLTEKEAKEKGISYETATFPWAASGRAIASD
+ CADGMTKLIFDKESHRVIGGAIVGTNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLH
+ ESVGLAAEIFEGSITDLPNPKAKKK"
+ misc_feature complement(2760144..2761553)
+ /locus_tag="SARI_02839"
+ /note="dihydrolipoamide dehydrogenase; Reviewed; Region:
+ PRK06467"
+ /db_xref="CDD:180579"
+ misc_feature complement(<2761425..2761529)
+ /locus_tag="SARI_02839"
+ /note="NAD(P)-binding Rossmann-like domain; Region:
+ NAD_binding_8; pfam13450"
+ /db_xref="CDD:205628"
+ misc_feature complement(2760792..2761031)
+ /locus_tag="SARI_02839"
+ /note="Pyridine nucleotide-disulphide oxidoreductase;
+ Region: Pyr_redox; pfam00070"
+ /db_xref="CDD:215691"
+ misc_feature complement(2760192..2760521)
+ /locus_tag="SARI_02839"
+ /note="Pyridine nucleotide-disulphide oxidoreductase,
+ dimerisation domain; Region: Pyr_redox_dim; pfam02852"
+ /db_xref="CDD:217252"
+ gene complement(2761762..2763642)
+ /gene="aceF"
+ /locus_tag="SARI_02841"
+ CDS complement(2761762..2763642)
+ /gene="aceF"
+ /locus_tag="SARI_02841"
+ /inference="protein motif:BlastProDom:IPR001078"
+ /inference="protein motif:HMMPfam:IPR000089"
+ /inference="protein motif:HMMPfam:IPR001078"
+ /inference="protein motif:HMMPfam:IPR004167"
+ /inference="protein motif:HMMTigr:IPR006256"
+ /inference="protein motif:ScanRegExp:IPR003016"
+ /inference="protein motif:superfamily:IPR011053"
+ /note="E2 component of pyruvate dehydrogenase multienzyme
+ complex; in Escherichia coli AceF contains three
+ N-terminal lipoyl domains"
+ /codon_start=1
+ /transl_table=11
+ /product="dihydrolipoamide acetyltransferase"
+ /protein_id="YP_001571829.1"
+ /db_xref="GI:161504718"
+ /db_xref="InterPro:IPR000089"
+ /db_xref="InterPro:IPR001078"
+ /db_xref="InterPro:IPR003016"
+ /db_xref="InterPro:IPR004167"
+ /db_xref="InterPro:IPR006256"
+ /db_xref="InterPro:IPR011053"
+ /translation="MAIEIKVPDIGADEVEITEILVKVGDKVEAEQSLITVEGDKASM
+ EVPSPQAGVVKEIKVSVGDKTETGKLIMIFDSAEGAATAAPAPAEEKKEAAPAAAPAA
+ AAAKEVHVPDIGGDEVEVTEVMVKVGDKVEAEQSLITVEGDKASMEVPAPFAGTVKEI
+ KINTGDKVSTGSLIMVFDVAGEAGAAAPAKAEAATTPAATGKKDVNVPDIGGDEVEVT
+ EVMVKVGDKVEAEQSLITVEGDKASMEVPAPFAGTVKEIKISIGDKVKTGSLIMVFEV
+ EGAAPAAAPAKQEAAAPAPAAKAEKPAAAPAAKAEGKSEFAENDAYVHATPLIRRLAR
+ EFGVNLAKVKGSGRKGRILREDVQAYVKEAIKRAEAAPAAAGGGIPGMLPWPKVDFSK
+ FGEVEEVELGRIQKISGANLSRNWVMIPHVTHFDKTDITDLEAFRKQQNAEAEKRKLD
+ VKYTPVVFIMKAVAAALEQMPRFNSSLSEDGQRLTLKKYINIGVAVDTPNGLVVPVFK
+ DVNKKSVTELSRELTTISKKARDGKLTAGEMQGGCFTISSIGGLGTTHFAPIVNAPEV
+ AILGVSKSAMEPVWNGKEFVPRLMMPISLSFDHRVIDGADGARFITIINNMLSDIRRL
+ VM"
+ misc_feature complement(2761765..2763642)
+ /gene="aceF"
+ /locus_tag="SARI_02841"
+ /note="pyruvate dehydrogenase dihydrolipoyltransacetylase;
+ Validated; Region: aceF; PRK11854"
+ /db_xref="CDD:236999"
+ misc_feature complement(2763421..2763636)
+ /gene="aceF"
+ /locus_tag="SARI_02841"
+ /note="Lipoyl domain of the dihydrolipoyl acyltransferase
+ component (E2) of 2-oxo acid dehydrogenases. 2-oxo acid
+ dehydrogenase multienzyme complexes, like pyruvate
+ dehydrogenase (PDH), 2-oxoglutarate dehydrogenase (OGDH)
+ and branched-chain 2-oxo acid...; Region: lipoyl_domain;
+ cd06849"
+ /db_xref="CDD:133458"
+ misc_feature complement(order(2763502..2763504,2763514..2763531,
+ 2763550..2763552))
+ /gene="aceF"
+ /locus_tag="SARI_02841"
+ /note="E3 interaction surface; other site"
+ /db_xref="CDD:133458"
+ misc_feature complement(2763520..2763522)
+ /gene="aceF"
+ /locus_tag="SARI_02841"
+ /note="lipoyl attachment site [posttranslational
+ modification]; other site"
+ /db_xref="CDD:133458"
+ misc_feature complement(2763112..2763321)
+ /gene="aceF"
+ /locus_tag="SARI_02841"
+ /note="Lipoyl domain of the dihydrolipoyl acyltransferase
+ component (E2) of 2-oxo acid dehydrogenases. 2-oxo acid
+ dehydrogenase multienzyme complexes, like pyruvate
+ dehydrogenase (PDH), 2-oxoglutarate dehydrogenase (OGDH)
+ and branched-chain 2-oxo acid...; Region: lipoyl_domain;
+ cd06849"
+ /db_xref="CDD:133458"
+ misc_feature complement(order(2763193..2763195,2763205..2763222,
+ 2763241..2763243))
+ /gene="aceF"
+ /locus_tag="SARI_02841"
+ /note="E3 interaction surface; other site"
+ /db_xref="CDD:133458"
+ misc_feature complement(2763211..2763213)
+ /gene="aceF"
+ /locus_tag="SARI_02841"
+ /note="lipoyl attachment site [posttranslational
+ modification]; other site"
+ /db_xref="CDD:133458"
+ misc_feature complement(2762821..2763033)
+ /gene="aceF"
+ /locus_tag="SARI_02841"
+ /note="Lipoyl domain of the dihydrolipoyl acyltransferase
+ component (E2) of 2-oxo acid dehydrogenases. 2-oxo acid
+ dehydrogenase multienzyme complexes, like pyruvate
+ dehydrogenase (PDH), 2-oxoglutarate dehydrogenase (OGDH)
+ and branched-chain 2-oxo acid...; Region: lipoyl_domain;
+ cd06849"
+ /db_xref="CDD:133458"
+ misc_feature complement(order(2762902..2762904,2762914..2762931,
+ 2762950..2762952))
+ /gene="aceF"
+ /locus_tag="SARI_02841"
+ /note="E3 interaction surface; other site"
+ /db_xref="CDD:133458"
+ misc_feature complement(2762920..2762922)
+ /gene="aceF"
+ /locus_tag="SARI_02841"
+ /note="lipoyl attachment site [posttranslational
+ modification]; other site"
+ /db_xref="CDD:133458"
+ misc_feature complement(2762566..2762676)
+ /gene="aceF"
+ /locus_tag="SARI_02841"
+ /note="e3 binding domain; Region: E3_binding; pfam02817"
+ /db_xref="CDD:202412"
+ misc_feature complement(2761765..2762409)
+ /gene="aceF"
+ /locus_tag="SARI_02841"
+ /note="2-oxoacid dehydrogenases acyltransferase (catalytic
+ domain); Region: 2-oxoacid_dh; pfam00198"
+ /db_xref="CDD:215782"
+ gene 2761846..2763780
+ /locus_tag="SARI_02840"
+ CDS 2761846..2763780
+ /locus_tag="SARI_02840"
+ /inference="similar to AA sequence:REFSEQ:ZP_01668478.1"
+ /note="'Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571830.1"
+ /db_xref="GI:161504717"
+ /translation="MVEGERDRHHQTRHKLFTIPHRFHRRLGHAEDSHFRRVDNRREV
+ GSSQAADTGDSEATALHFASGKLTITRFFGDGSQFARQLSHTLLIHVFKDWNHQTIWR
+ INRHADVDVFLQRQALTIFGQRAIEARHLLKRSGNRFHDEDNRGVFHIQFALLSFGVL
+ LFTERFQIGDIGFVEVRNVRDHHPVTAQVRARDFLDTAQFHFFNFTKLTEVHFRPRQH
+ AWNTAACCCRCSFRTLDSLFYVSLNVFAQDTTFTARAFHFRQVHAEFACQAANQRRRV
+ NVSVVLSKFGFAFRFGSRRRSRFLSFCRWRGGSRFLFSRSGSRRCAFHFEDHNQRTGF
+ HFVADADFDLFHGARERCRNFHRSLVAFYGDQRLFSFHFIADFHHHFGNFNFVAADIR
+ YVNVFLASGCWRRSGFRFRRCCCTRFTCNVEDHDQRTGRHFVAGVNFDLFHGARERRR
+ NFHRGFITFYGDQRLFSFHFIADFHHHFGHFDFVAADIRYVYFFRRCRSRCCRRSRFF
+ LLFCRSRRSSCCTFGGIENHNQFASLGFVADRDLDLFHDASLRRRDFHRGFVAFYGDQ
+ RLFSFNFVAHFDQNLGDFNFICPDVRYFDFDSHYSFTSYARRGLTLSASMLNLVIASA
+ TTFLSISPRLASSPSAATTT"
+ gene complement(2763657..2766320)
+ /gene="aceE"
+ /locus_tag="SARI_02842"
+ CDS complement(2763657..2766320)
+ /gene="aceE"
+ /locus_tag="SARI_02842"
+ /inference="protein motif:Gene3D:IPR009014"
+ /inference="protein motif:HMMPfam:IPR005474"
+ /inference="protein motif:HMMPIR:IPR004660"
+ /inference="protein motif:HMMTigr:IPR004660"
+ /inference="protein motif:superfamily:IPR009014"
+ /note="E1 component; part of pyruvate dehydrogenase; forms
+ a complex with DlaT and LpdC"
+ /codon_start=1
+ /transl_table=11
+ /product="pyruvate dehydrogenase subunit E1"
+ /protein_id="YP_001571831.1"
+ /db_xref="GI:161504719"
+ /db_xref="InterPro:IPR004660"
+ /db_xref="InterPro:IPR005474"
+ /db_xref="InterPro:IPR009014"
+ /translation="MSERFPNDVDPIETRDWLQAIESVIREEGVERAQYLIDQLLSEA
+ RKGGVKVAAGAGASNYINTIAVEDEPEYPGNLELERRIRSAIRWNAIMTVLRASKKDL
+ ELGGHMASFQSSATIYDVCFNHFFRARNEQDGGDLVYFQGHISPGVYARAFLEGRLTE
+ EQMDNFRQEVHGNGLSSYPHPKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLEHRGLK
+ DTSKQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFVINCNLQRLDGPVTGNGKIV
+ NELEGIFEGAGWNVIKVMWGGRWDELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYV
+ REHFFGKYPETAALVADWTDEQIWALNRGGHDPKKVYAALKKAQETKGKATVILAHTI
+ KGYGMGDSAEGKNIAHQVKKMNMDGVRYVRDRFNVPVADADIEKLPYITFPEGSEEHK
+ YLHERRQALHGYLPSRQPNFTEKLELPTLEDFSALLEEQSKEISTTIAFVRALNVMLK
+ NKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDEKGQIL
+ QEGINELGAGASWLAAATSYSTNNLPMIPFYIYYSMFGFQRIGDLCWAAGDQQARGFL
+ IGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDPSYAYEVAVIMHDGLERMYGEK
+ QENVYYYITTLNENYHMPAMPEGAEEGIRKGIYKLETIEGSKGKVQLLGSGSILRHVR
+ EAAEILAKDYGVGSDVYSVTSFTELARDGQDCERWNMLHPLETPRVPYIAQVMNDAPA
+ VASTDYMKLFAEQVRTYVPADDYRVLGTDGFGRSDSRENLRHHFEVDASYVVVAALGE
+ LAKRGEIDKKVVADAITKFNIDADKVNPRLA"
+ misc_feature complement(2763660..2766320)
+ /gene="aceE"
+ /locus_tag="SARI_02842"
+ /note="pyruvate dehydrogenase subunit E1; Reviewed;
+ Region: aceE; PRK09405"
+ /db_xref="CDD:236500"
+ misc_feature complement(2764938..2766095)
+ /gene="aceE"
+ /locus_tag="SARI_02842"
+ /note="Thiamine pyrophosphate (TPP) family, E1 of E. coli
+ PDC-like subfamily, TPP-binding module; composed of
+ proteins similar to the E1 component of the Escherichia
+ coli pyruvate dehydrogenase multienzyme complex (PDC). PDC
+ catalyzes the oxidative...; Region: TPP_E1_EcPDC_like;
+ cd02017"
+ /db_xref="CDD:238975"
+ misc_feature complement(order(2765466..2765468,2765475..2765480,
+ 2765487..2765489,2765511..2765513,2765523..2765531,
+ 2765577..2765579,2765589..2765591,2765598..2765600,
+ 2765607..2765618,2765736..2765744,2765748..2765750,
+ 2765775..2765777,2765781..2765783,2765787..2765792,
+ 2765811..2765822,2766009..2766017))
+ /gene="aceE"
+ /locus_tag="SARI_02842"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238975"
+ misc_feature complement(order(2765142..2765144,2765532..2765534,
+ 2765538..2765540,2765613..2765615,2765622..2765630,
+ 2765736..2765738,2765742..2765744,2765892..2765894,
+ 2765898..2765900,2765991..2765993))
+ /gene="aceE"
+ /locus_tag="SARI_02842"
+ /note="TPP-binding site [chemical binding]; other site"
+ /db_xref="CDD:238975"
+ gene complement(2766480..2767244)
+ /gene="pdhR"
+ /locus_tag="SARI_02843"
+ CDS complement(2766480..2767244)
+ /gene="pdhR"
+ /locus_tag="SARI_02843"
+ /inference="protein motif:Gene3D:IPR000524"
+ /inference="protein motif:HMMPfam:IPR000524"
+ /inference="protein motif:HMMPfam:IPR011711"
+ /inference="protein motif:HMMSmart:IPR000524"
+ /inference="similar to AA sequence:INSD:CAD01310.1"
+ /note="activates lctPRD operon; autoregulates itself
+ through repression of pdhR-aceEF-lpdA operon; regulates
+ pyruvate dehydrogenase complex"
+ /codon_start=1
+ /transl_table=11
+ /product="transcriptional regulator PdhR"
+ /protein_id="YP_001571832.1"
+ /db_xref="GI:161504720"
+ /db_xref="InterPro:IPR000524"
+ /db_xref="InterPro:IPR011711"
+ /translation="MAYSKIRQPKLSDVIEQQLEFLILEGTLRPGEKLPPERELAKQF
+ DVSRPSLREAIQRLEAKGLLLRRQGGGTFVQSSLWQSFSDPLVELLSDHPESQFDLLE
+ TRHALEGIAAYYAALRSTDEDKDRIRELHHAIELAQESGDLDAESDAVLQYQIAVTEA
+ AHNVVLLHLLRCMEPMLAQNVRQNFELLYARREMLPLVSTHRTRIFEAIMAGKPEEAR
+ EASHRHLAFIEEIMLDRSREESRRERALRRLEQRKN"
+ misc_feature complement(2766543..2767244)
+ /gene="pdhR"
+ /locus_tag="SARI_02843"
+ /note="transcriptional regulator PdhR; Reviewed; Region:
+ pdhR; PRK09464"
+ /db_xref="CDD:181879"
+ misc_feature complement(2767023..2767217)
+ /gene="pdhR"
+ /locus_tag="SARI_02843"
+ /note="Winged helix-turn-helix (WHTH) DNA-binding domain
+ of the GntR family of transcriptional regulators; Region:
+ WHTH_GntR; cd07377"
+ /db_xref="CDD:153418"
+ misc_feature complement(order(2767029..2767040,2767044..2767049,
+ 2767077..2767079,2767086..2767091,2767095..2767109,
+ 2767131..2767136,2767140..2767142,2767209..2767211,
+ 2767215..2767217))
+ /gene="pdhR"
+ /locus_tag="SARI_02843"
+ /note="DNA-binding site [nucleotide binding]; DNA binding
+ site"
+ /db_xref="CDD:153418"
+ misc_feature complement(2766567..2766950)
+ /gene="pdhR"
+ /locus_tag="SARI_02843"
+ /note="This entry represents the C-terminal ligand binding
+ domain of many members of the GntR family; Region: FCD;
+ smart00895"
+ /db_xref="CDD:214892"
+ gene 2767807..2769180
+ /locus_tag="SARI_02844"
+ CDS 2767807..2769180
+ /locus_tag="SARI_02844"
+ /inference="protein motif:HMMPanther:IPR002293"
+ /inference="protein motif:HMMPfam:IPR004841"
+ /inference="protein motif:ScanRegExp:IPR004840"
+ /inference="similar to AA sequence:SwissProt:P0A187"
+ /note="'KEGG: eci:UTI89_C0120 3.3e-227 aroP; aromatic
+ amino acid transport protein AroP K03293;
+ COG: COG1113 Gamma-aminobutyrate permease and related
+ permeases;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="aromatic amino acid transporter"
+ /protein_id="YP_001571833.1"
+ /db_xref="GI:161504721"
+ /db_xref="InterPro:IPR002293"
+ /db_xref="InterPro:IPR004840"
+ /db_xref="InterPro:IPR004841"
+ /translation="MMDSQQHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSA
+ GPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKYWGGFAGFASGWNYWVL
+ YVLVAMAELTAVGKYIQFWWPEIPTWASAALFFVVINAINLTNVKVFGEMEFWFAIIK
+ VIAVIAMILFGAWLLFSDTAGPQATVRNLWEQGGFLPHGWTGLVMMMAIIMFSFGGLE
+ LVGITAAEADNPEQSIPKATNQVIYRILIFYIGSLAVLLSLLPWARVTADTSPFVLIF
+ HELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNAPKALLSVDKRGVPV
+ NTILLSAIVTALCVLINYLAPESAFGLLMALVVSALVINWAMISLAHMKFRRAKQQQG
+ VKTRFPALFYPLGNVLCLLFMAAVLLIMLMTPGMAISVWLIPVWLLILGVGYVCKEKT
+ AKVVKAH"
+ misc_feature 2767810..2769177
+ /locus_tag="SARI_02844"
+ /note="aromatic amino acid transporter; Provisional;
+ Region: PRK10238"
+ /db_xref="CDD:182324"
+ gene 2769184..2769321
+ /locus_tag="SARI_02845"
+ CDS 2769184..2769321
+ /locus_tag="SARI_02845"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571834.1"
+ /db_xref="GI:161504722"
+ /translation="MPDGMHYAFPPRPGRVLSASQFPAYNHFIHISGVILLRKKKLAG
+ E"
+ gene 2769354..2770760
+ /locus_tag="SARI_02846"
+ CDS 2769354..2770760
+ /locus_tag="SARI_02846"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="protein motif:HMMTigr:IPR001927"
+ /inference="protein motif:ScanRegExp:IPR001927"
+ /inference="similar to AA sequence:INSD:AAX64054.1"
+ /note="'KEGG: eci:UTI89_C4210 1.3e-113 yicJ; hypothetical
+ symporter YicJ K03292;
+ COG: COG2211 Na+/melibiose symporter and related
+ transporters;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571835.1"
+ /db_xref="GI:161504723"
+ /db_xref="InterPro:IPR001927"
+ /db_xref="InterPro:IPR011701"
+ /translation="MDKGRLSVREKIGYGMGDAGCNIIFGAIMLFVNYFYTDIFGLAP
+ ALVGVLLLSVRVIDAVTDPVMGALADRTQSQYGRFRPWLLWVAFPYALFSILMFTTPD
+ WSYNSKVVYAFVTYFLLSVTYTAINIPYCSLGGVITNDPKERVACQSYRFVLVGIATL
+ LLSLTLLPMVDWFGGGDKAKGYQLAMTVLAIIGMGMFLFCFASVRERVRPAVPTHDDM
+ KNDFKDVWKNDQWVRILLLTLCNVCPGFIRMAATMYYVTWVMGQSTHFATLFISLGVV
+ GMMIGSMLAKVLTDRWCKLKVFFWTNIVLAIFSCAFYFFDPKATVMIVALYFLLNILH
+ QIPSPLHWSLMADVDDYGEWKTGKRITGISFSGNLFFLKLGLAIAGAMVGFLLSWYGY
+ DASAKTQSASAMNGIMLLFTVIPGIGYLITAGVVRLLKVDRELMKQIQDDLEKRRTNY
+ RELSELQELNAAESVRKA"
+ misc_feature 2769354..2770733
+ /locus_tag="SARI_02846"
+ /note="Na+/melibiose symporter and related transporters
+ [Carbohydrate transport and metabolism]; Region: MelB;
+ COG2211"
+ /db_xref="CDD:225121"
+ misc_feature 2769528..2770538
+ /locus_tag="SARI_02846"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature order(2769537..2769542,2769546..2769551,2769720..2769725,
+ 2769732..2769737,2769744..2769749,2769756..2769758,
+ 2769795..2769800,2769807..2769812,2769828..2769830,
+ 2770086..2770088,2770095..2770100,2770107..2770112,
+ 2770152..2770154,2770164..2770166,2770176..2770178,
+ 2770185..2770187,2770197..2770199,2770344..2770346,
+ 2770353..2770358,2770365..2770367,2770377..2770382,
+ 2770389..2770391,2770443..2770448,2770455..2770460,
+ 2770467..2770472,2770479..2770481)
+ /locus_tag="SARI_02846"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene 2770760..2771710
+ /locus_tag="SARI_02847"
+ CDS 2770760..2771710
+ /locus_tag="SARI_02847"
+ /inference="protein motif:HMMPfam:IPR006710"
+ /inference="similar to AA sequence:INSD:CAD01307.1"
+ /note="'KEGG: sde:Sde_0777 7.6e-102 ribosomal protein L11
+ methyltransferase K01209;
+ COG: COG3940 Predicted beta-xylosidase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571836.1"
+ /db_xref="GI:161504724"
+ /db_xref="InterPro:IPR006710"
+ /translation="MTNWPNPFIEQRADPFILRDGSDYYFIASVPEYDRLEIRRADSL
+ QGLRAAEPVVVWRKPKTGPMSELIWAPEMHRINGKWYLYFAAAHTQALDKLNMFQHRM
+ FALECADADPLTGVWTEKGQVKTPFDTFALDATTFHHQGKQWYLWAQKAPDIAGNSNI
+ YLAELENPWTLKGEPVRLSKPEYDWECRGFWVNEGPAVLVHGDKLFISYSASATDENY
+ CMGLLWIDLRADPRDPANWHKLPRPVFTTSIENRQFGPGHNSFTTTPDGEDVLVYHAR
+ NYTEIAGDPLYDPNRHTRLKRIRWDENGMPDFGIPPADTL"
+ misc_feature 2770796..2771686
+ /locus_tag="SARI_02847"
+ /note="Glycosyl hydrolase family 43; Region: GH43_1;
+ cd08980"
+ /db_xref="CDD:185721"
+ misc_feature order(2770799..2770801,2771156..2771158,2771339..2771341)
+ /locus_tag="SARI_02847"
+ /note="active site"
+ /db_xref="CDD:185721"
+ gene complement(2771776..2772630)
+ /locus_tag="SARI_02848"
+ CDS complement(2771776..2772630)
+ /locus_tag="SARI_02848"
+ /inference="similar to AA sequence:REFSEQ:YP_215133.1"
+ /note="involved in regulation of beta-lactamase; putative
+ signaling protein"
+ /codon_start=1
+ /transl_table=11
+ /product="regulatory protein AmpE"
+ /protein_id="YP_001571837.1"
+ /db_xref="GI:161504725"
+ /translation="MTLFTTLLVLIVERLFKLGEHWQLDHRLEALFHRITHFSVLRTM
+ GMTAIAMAVTFLLLQGLKGLLFNVPTMVMWILLGVLCIGAGKARVHYHAWLKAASRND
+ PHPCEAMAGELTLIHGVPPDCNEREFLRELQNALLWINFRFYLAPLFWFIVGGPWGPV
+ TLVGYAFLRAWQTWLARYQTPHQRLQSGIDAILHVLDWIPVRLAGVVYALLGHGEKAL
+ PAWFASLADLHTSQYQVLTRLAQFSLAREPHTDKVETPKAAVSMAKKASFVLVVIIAV
+ LTLYGALV"
+ misc_feature complement(2771779..2772630)
+ /locus_tag="SARI_02848"
+ /note="regulatory protein AmpE; Provisional; Region:
+ PRK10987"
+ /db_xref="CDD:236811"
+ gene complement(2772627..2773190)
+ /locus_tag="SARI_02849"
+ CDS complement(2772627..2773190)
+ /locus_tag="SARI_02849"
+ /inference="protein motif:HMMPfam:IPR002502"
+ /inference="protein motif:HMMSmart:IPR002502"
+ /inference="similar to AA sequence:INSD:AAX64051.1"
+ /note="'KEGG: eci:UTI89_C0118 1.4e-86 ampD; AmpD protein
+ K03806;
+ COG: COG3023 Negative regulator of beta-lactamase
+ expression;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="N-acetyl-anhydromuranmyl-L-alanine amidase"
+ /protein_id="YP_001571838.1"
+ /db_xref="GI:161504726"
+ /db_xref="InterPro:IPR002502"
+ /translation="MLLDKGWLVEARRVPSPHYDCRPDDENPSLLVVHNISLPPGEFG
+ GPWIDALFTGKIYPDAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSNY
+ QGRERCNDFSIGIELEGTDALPYTDVQYQQLAAVTRTLIACYPAIADNMTGHCNIAPD
+ RKTDPGPAFDWPRFRALVAPSSHKEMT"
+ misc_feature complement(<2772630..2773184)
+ /locus_tag="SARI_02849"
+ /note="N-acetyl-anhydromuramyl-L-alanine amidase [Cell
+ envelope biogenesis, outer membrane]; Region: ampD;
+ COG3023"
+ /db_xref="CDD:225567"
+ misc_feature complement(2772687..>2772980)
+ /locus_tag="SARI_02849"
+ /note="Peptidoglycan recognition proteins (PGRPs) are
+ pattern recognition receptors that bind, and in certain
+ cases, hydrolyze peptidoglycans (PGNs) of bacterial cell
+ walls. PGRPs have been divided into three classes: short
+ PGRPs (PGRP-S), that are small (20...; Region: PGRP;
+ cd06583"
+ /db_xref="CDD:133475"
+ misc_feature complement(order(2772699..2772701,2772705..2772707,
+ 2772729..2772731,2772969..2772971))
+ /locus_tag="SARI_02849"
+ /note="amidase catalytic site [active]"
+ /db_xref="CDD:133475"
+ misc_feature complement(order(2772699..2772707,2772717..2772719,
+ 2772729..2772731,2772864..2772866,2772903..2772908,
+ 2772927..2772929,2772969..2772971))
+ /locus_tag="SARI_02849"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:133475"
+ misc_feature complement(order(2772699..2772701,2772729..2772731))
+ /locus_tag="SARI_02849"
+ /note="Zn binding residues [ion binding]; other site"
+ /db_xref="CDD:133475"
+ gene 2773236..2774171
+ /locus_tag="SARI_02850"
+ CDS 2773236..2774171
+ /locus_tag="SARI_02850"
+ /inference="protein motif:BlastProDom:IPR002638"
+ /inference="protein motif:HMMPfam:IPR002638"
+ /inference="protein motif:HMMTigr:IPR004393"
+ /inference="similar to AA sequence:REFSEQ:YP_215131.1"
+ /note="'catalyzes the formation of
+ pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose
+ 1-diphosphate from nictinate D-ribonucleotide'"
+ /codon_start=1
+ /transl_table=11
+ /product="quinolinate phosphoribosyltransferase"
+ /protein_id="YP_001571839.1"
+ /db_xref="GI:161504727"
+ /db_xref="InterPro:IPR002638"
+ /db_xref="InterPro:IPR004393"
+ /translation="MFLPYDSLVIWSFIMPPRRYNPDDRRDALLERINIDIPAAVAQA
+ LREDLGGEVDASNDITAQLLPEDIRTHAAVITREDGVFCGKRWVEEVFIQLAGDDVHL
+ TWHVDDGDAIHANQTLFELDGPARVLLTGERTALNFVQTLSGVASEVRRYVALLTGTK
+ TQLLDTRKTLPGLRTALKYAVLCGGGANHRLGLTDAFLIKENHIIASGSVRQAVEKAF
+ WLHPDVPIEVEVENLDELDDALKAGADIIMLDNFETDQMREAVKRVNGQARLEVSGNV
+ TAKTLREFAETGVDFISVGALTKHLRALDLSMRFR"
+ misc_feature 2773317..2774168
+ /locus_tag="SARI_02850"
+ /note="quinolinate phosphoribosyltransferase; Validated;
+ Region: PRK09016"
+ /db_xref="CDD:181612"
+ misc_feature 2773350..2774162
+ /locus_tag="SARI_02850"
+ /note="Quinolinate phosphoribosyl transferase (QAPRTase or
+ QPRTase), also called nicotinate-nucleotide
+ pyrophosphorylase, is involved in the de novo synthesis of
+ NAD in both prokaryotes and eukaryotes. It catalyses the
+ reaction of quinolinic acid (QA) with...; Region: QPRTase;
+ cd01572"
+ /db_xref="CDD:238806"
+ misc_feature order(2773413..2773418,2773629..2773634,2773644..2773646,
+ 2773734..2773736,2773740..2773742,2773752..2773757,
+ 2773812..2773817,2773827..2773829,2773833..2773835,
+ 2773839..2773844,2773851..2773853,2773884..2773886,
+ 2774130..2774132)
+ /locus_tag="SARI_02850"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238806"
+ misc_feature order(2773731..2773739,2773800..2773805,2773983..2773985,
+ 2774052..2774057,2774112..2774114,2774118..2774123,
+ 2774130..2774132)
+ /locus_tag="SARI_02850"
+ /note="active site"
+ /db_xref="CDD:238806"
+ gene 2774392..2774829
+ /locus_tag="SARI_02851"
+ CDS 2774392..2774829
+ /locus_tag="SARI_02851"
+ /inference="protein motif:BlastProDom:IPR001082"
+ /inference="protein motif:HMMPfam:IPR012902"
+ /inference="protein motif:HMMTigr:IPR012902"
+ /inference="protein motif:ScanRegExp:IPR001120"
+ /inference="similar to AA sequence:INSD:AAX64049.1"
+ /note="'COG: COG4969 Tfp pilus assembly protein, major
+ pilin PilA;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative major pilin subunit"
+ /protein_id="YP_001571840.1"
+ /db_xref="GI:161504728"
+ /db_xref="InterPro:IPR001082"
+ /db_xref="InterPro:IPR001120"
+ /db_xref="InterPro:IPR012902"
+ /translation="MEKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQ
+ TFVPYRTAVELCALEHGGTGTCDAGANGIPSPVATRYVSGMSVEKGVITLTGQESLNG
+ LSVIMTPAWDNANGITGWTRNCNIQSDSALQQACEDVFRFDAN"
+ misc_feature 2774392..2774826
+ /locus_tag="SARI_02851"
+ /note="putative major pilin subunit; Provisional; Region:
+ PRK10574"
+ /db_xref="CDD:236718"
+ misc_feature <2774398..>2774436
+ /locus_tag="SARI_02851"
+ /note="Type IV pilin N-term methylation site GFxxxE;
+ Region: N_methyl_2; pfam13544"
+ /db_xref="CDD:205722"
+ misc_feature 2774539..2774754
+ /locus_tag="SARI_02851"
+ /note="Pilin (bacterial filament); Region: Pilin;
+ pfam00114"
+ /db_xref="CDD:215727"
+ gene 2774839..2776224
+ /locus_tag="SARI_02852"
+ CDS 2774839..2776224
+ /locus_tag="SARI_02852"
+ /inference="protein motif:BlastProDom:IPR001482"
+ /inference="protein motif:HMMPfam:IPR001482"
+ /inference="protein motif:HMMPfam:IPR007831"
+ /inference="protein motif:ScanRegExp:IPR001482"
+ /inference="similar to AA sequence:INSD:AAX64048.1"
+ /note="'KEGG: pen:PSEEN2333 2.5e-80 xcpR-2; type II
+ secretion pathway protein E K01509;
+ COG: COG2804 Type II secretory pathway, ATPase PulE/Tfp
+ pilus assembly pathway, ATPase PilB;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571841.1"
+ /db_xref="GI:161504729"
+ /db_xref="InterPro:IPR001482"
+ /db_xref="InterPro:IPR007831"
+ /translation="MKDAQLNTLCQRHQAVLINSASNSITVAVVDAPSHALLDALHFA
+ TQKQIDIVCWTRQQMENHLHKPDQAPSANAAKGGETAAQLLNQTLRSAMAKRASDIHL
+ EPGASRYRIRLRIDGVLHILQDIAKETGLALTARLKVLGNLDIAEHRLPQDGQFTVDL
+ SGDSISFRIATLPCKEGEKVVLRLLHQVEQTLDLDTLGMYGAQLTVFRQALQQPQGLV
+ LVTGPTGSGKTVTLYSALQTRNTPGINLCSVEDPIEIPLDGINQTQIHPRAGLTFQNV
+ LRALLRQDPDIIMVGEIRDGDTAEIAIKAAQTGHLVLSTLHTNSTSETLIRLQQMGVA
+ RWMISSALTLVVAQRLVRKLCPHCKQRLSDPVVLSPNLWPSALPRWQASGCQHCYHGF
+ YGRTALFEVLTVTPALRQLIASGASAQALEAHLQQTGTGTLFENGCRAVEQGMTSFEE
+ ILRVLGMPHER"
+ misc_feature 2774839..2776215
+ /locus_tag="SARI_02852"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10436"
+ /db_xref="CDD:236694"
+ misc_feature <2774863..2775033
+ /locus_tag="SARI_02852"
+ /note="Type II secretion system (T2SS), protein E,
+ N-terminal domain; Region: T2SE_Nter; pfam05157"
+ /db_xref="CDD:218471"
+ misc_feature 2775244..2776023
+ /locus_tag="SARI_02852"
+ /note="PulE/GspE The type II secretory pathway is the main
+ terminal branch of the general secretory pathway (GSP).
+ It is responsible for the export the majority of
+ Gram-negative bacterial exoenzymes and toxins. PulE is a
+ cytoplasmic protein of the GSP, which...; Region:
+ PulE-GspE; cd01129"
+ /db_xref="CDD:238549"
+ misc_feature 2775502..2775525
+ /locus_tag="SARI_02852"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:238549"
+ misc_feature order(2775505..2775507,2775517..2775525,2775580..2775582,
+ 2775586..2775591,2775709..2775714)
+ /locus_tag="SARI_02852"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238549"
+ misc_feature 2775697..2775714
+ /locus_tag="SARI_02852"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:238549"
+ gene 2776214..2777416
+ /locus_tag="SARI_02853"
+ CDS 2776214..2777416
+ /locus_tag="SARI_02853"
+ /inference="protein motif:FPrintScan:IPR003004"
+ /inference="protein motif:HMMPfam:IPR001992"
+ /inference="similar to AA sequence:REFSEQ:NP_459147.1"
+ /note="'COG: COG1459 Type II secretory pathway, component
+ PulF;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="type IV pilin biogenesis protein"
+ /protein_id="YP_001571842.1"
+ /db_xref="GI:161504730"
+ /db_xref="InterPro:IPR001992"
+ /db_xref="InterPro:IPR003004"
+ /translation="MSVKQLWRWQGVNDKGQLEQDVVWVDNRLALIITLQHQRIMPLR
+ IKRMGVNAALWKEEQSAEIIHQLATLIHAGLTLSEGLELLAKQHPHRQWQALLRTLAH
+ ELEQGVPFSSALVSWPQVFPPLYQTMIRTGELTGKLAECCFELARQQKAQRQITVSVK
+ KALRYPAIIMTMAALVVFAMLHFVLPEFAAIYRSFNTPLPLLTRGIIAIAQWGSAWGW
+ LILLLAVIGAIAHHRVKQKPSWQAQRQHLLLRLPVMGRLIRGQKLAQIFTVLALTQSA
+ GIPFLQGLESTIDSLGCPYWSQRLTQVHQEIAAGNPVWLALKNTQEFSPLCLQLVRTG
+ EASGSLDIMLHNLARHHSETTLALADNLASLLEPALLIITGLIIGTLVVAMYLPIFHL
+ GDAMSGMG"
+ misc_feature 2776214..2777404
+ /locus_tag="SARI_02853"
+ /note="type IV pilin biogenesis protein; Provisional;
+ Region: PRK10573"
+ /db_xref="CDD:182559"
+ misc_feature 2776400..2776771
+ /locus_tag="SARI_02853"
+ /note="Type II secretion system (T2SS), protein F; Region:
+ T2SF; pfam00482"
+ /db_xref="CDD:215939"
+ misc_feature 2777009..2777377
+ /locus_tag="SARI_02853"
+ /note="Type II secretion system (T2SS), protein F; Region:
+ T2SF; pfam00482"
+ /db_xref="CDD:215939"
+ gene complement(2777447..2778490)
+ /locus_tag="SARI_02854"
+ CDS complement(2777447..2778490)
+ /locus_tag="SARI_02854"
+ /inference="protein motif:HMMPfam:IPR001093"
+ /inference="protein motif:HMMTigr:IPR005993"
+ /inference="protein motif:ScanRegExp:IPR001093"
+ /inference="similar to AA sequence:REFSEQ:NP_459146.1"
+ /note="catalyzes the NADPH-dependent deamination of GMP to
+ inosine monophosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="guanosine 5'-monophosphate oxidoreductase"
+ /protein_id="YP_001571843.1"
+ /db_xref="GI:161504731"
+ /db_xref="InterPro:IPR001093"
+ /db_xref="InterPro:IPR005993"
+ /translation="MRIEEDLKLGFKDVLIRPKRSTLKSRSDVELERQFTFKHSGQTW
+ SGVPIIAANMDTVGTFEMAQALAGFDILTAVHKHYTVEEWAAFINTASADVLKHVMVS
+ TGTSDADFAKTAQILALNPALNFVCIDVANGYSEHFVQFVAKAREAWPTKTICAGNVV
+ TGEMCEELILSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGMIVS
+ DGGCTMPGDVAKAFGGGADFVMLGGMLAGHEESGGSVVEENGEKFMLFYGMSSESAMN
+ RHVGGVAKYRAAEGKTVKLPLRGPVGNTARDILGGLRSACTYVGASRLKELTKRTTFI
+ RVQEQENRIFNNL"
+ misc_feature complement(2777453..2778490)
+ /locus_tag="SARI_02854"
+ /note="guanosine 5'-monophosphate oxidoreductase;
+ Provisional; Region: PRK05096"
+ /db_xref="CDD:235343"
+ misc_feature complement(2777483..2778466)
+ /locus_tag="SARI_02854"
+ /note="IMPDH: The catalytic domain of the inosine
+ monophosphate dehydrogenase. IMPDH catalyzes the
+ NAD-dependent oxidation of inosine 5'-monophosphate
+ (IMP) to xanthosine 5' monophosphate (XMP). It is a
+ rate-limiting step in the de novo synthesis of...; Region:
+ IMPDH; cd00381"
+ /db_xref="CDD:238223"
+ misc_feature complement(order(2777621..2777626,2777681..2777689,
+ 2777693..2777695,2777762..2777767,2777828..2777830,
+ 2777834..2777836,2777933..2777941,2778335..2778337))
+ /locus_tag="SARI_02854"
+ /note="active site"
+ /db_xref="CDD:238223"
+ gene 2778716..2779336
+ /gene="coaE"
+ /locus_tag="SARI_02855"
+ CDS 2778716..2779336
+ /gene="coaE"
+ /locus_tag="SARI_02855"
+ /inference="protein motif:BlastProDom:IPR001977"
+ /inference="protein motif:HMMPanther:IPR001977"
+ /inference="protein motif:HMMPfam:IPR001977"
+ /inference="protein motif:HMMTigr:IPR001977"
+ /inference="protein motif:ScanRegExp:IPR001977"
+ /inference="similar to AA sequence:SwissProt:P63829"
+ /note="catalyzes the phosphorylation of the 3'-hydroxyl
+ group of dephosphocoenzyme A to form coenzyme A; involved
+ in coenzyme A biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="dephospho-CoA kinase"
+ /protein_id="YP_001571844.1"
+ /db_xref="GI:161504732"
+ /db_xref="InterPro:IPR001977"
+ /translation="MRYTVALTGGIGSGKSTVADAFADLGITVIDADIIARQMVEPGQ
+ PALNAIAEHFGSELIAADGTLRRRALRERIFSHPEEKAWLNALLHPLIQQETQRQFQQ
+ ATSPYVLWVVPLLVENKLYPKANRVLVVDIKPETQLMRTMQRDDVTREHVEHILAAQA
+ TREARLAVADDVIDNNGAPDAIASDVARLHACYLKLASQFVSQEKP"
+ misc_feature 2778716..2779318
+ /gene="coaE"
+ /locus_tag="SARI_02855"
+ /note="Dephospho-CoA kinase [Coenzyme metabolism]; Region:
+ CoaE; COG0237"
+ /db_xref="CDD:223315"
+ misc_feature 2778728..2779258
+ /gene="coaE"
+ /locus_tag="SARI_02855"
+ /note="Dephospho-coenzyme A kinase (DPCK, EC 2.7.1.24)
+ catalyzes the phosphorylation of dephosphocoenzyme A
+ (dCoA) to yield CoA, which is the final step in CoA
+ biosynthesis; Region: DPCK; cd02022"
+ /db_xref="CDD:238980"
+ misc_feature order(2778737..2778739,2778812..2778814,2778980..2778982,
+ 2779052..2779057,2779190..2779192)
+ /gene="coaE"
+ /locus_tag="SARI_02855"
+ /note="CoA-binding site [chemical binding]; other site"
+ /db_xref="CDD:238980"
+ misc_feature order(2778740..2778748,2778755..2778760,2779133..2779135,
+ 2779238..2779240)
+ /gene="coaE"
+ /locus_tag="SARI_02855"
+ /note="ATP-binding [chemical binding]; other site"
+ /db_xref="CDD:238980"
+ gene 2779336..2780079
+ /locus_tag="SARI_02856"
+ CDS 2779336..2780079
+ /locus_tag="SARI_02856"
+ /inference="protein motif:HMMPfam:IPR009777"
+ /inference="similar to AA sequence:REFSEQ:YP_215125.1"
+ /note="'COG: COG4582 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571845.1"
+ /db_xref="GI:161504733"
+ /db_xref="InterPro:IPR009777"
+ /translation="MHTQVLFEHPLNEKMRTWLRIEFLIQQLSINLPIADHAGALHFF
+ RNISDLLDVFERGEVRTELLKELERQQRKLQAWVEVPGVDQDRIEALRQQLKSAGSVL
+ ISAPRIGQQLREDRLIALVRQRLSIPGGCCSFDLPTLHIWLHLQQPQRDAQIETWLAS
+ LNPLTQALTLVLDLIRNSAPFRKQTSLNGFYQDNGDDADLLRLILTLDSQLYPQISGH
+ KSRFAIRFMPLDSENGLVPERLDFELACC"
+ misc_feature 2779345..2780076
+ /locus_tag="SARI_02856"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG4582"
+ /db_xref="CDD:226948"
+ gene 2780089..2780280
+ /locus_tag="SARI_02857"
+ CDS 2780089..2780280
+ /locus_tag="SARI_02857"
+ /inference="protein motif:HMMPfam:IPR005584"
+ /inference="similar to AA sequence:REFSEQ:YP_215124.1"
+ /note="'KEGG: gbe:GbCGDNIH1_1027 0.00019 ribonuclease G;
+ COG: COG3024 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="zinc-binding protein"
+ /protein_id="YP_001571846.1"
+ /db_xref="GI:161504734"
+ /db_xref="InterPro:IPR005584"
+ /translation="MSDVTVVSCPTCGKPVVWGEVSPFRPFCSKRCQLIDLGEWAAEE
+ KRIASSGDLSDSDDWSEER"
+ misc_feature 2780089..>2780232
+ /locus_tag="SARI_02857"
+ /note="DNA gyrase inhibitor; Reviewed; Region: PRK00418"
+ /db_xref="CDD:234754"
+ gene complement(2780277..2780483)
+ /locus_tag="SARI_02859"
+ CDS complement(2780277..2780483)
+ /locus_tag="SARI_02859"
+ /inference="similar to AA sequence:INSD:AAV76174.1"
+ /note="'COG: COG0583 Transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571847.1"
+ /db_xref="GI:161504736"
+ /translation="MPPAPADLGSVITRQGFLAQWRLRFCYSLISPVYWYYPGRAHMA
+ PKLRVFIDYFCHKAILPSQQSHYR"
+ misc_feature complement(2780322..>2780432)
+ /locus_tag="SARI_02859"
+ /note="The substrate binding domain of LysR-type
+ transcriptional regulators (LTTRs), a member of the type 2
+ periplasmic binding fold protein superfamily; Region:
+ PBP2_LTTR_substrate; cl11398"
+ /db_xref="CDD:245600"
+ gene 2780348..2780560
+ /locus_tag="SARI_02858"
+ CDS 2780348..2780560
+ /locus_tag="SARI_02858"
+ /inference="similar to AA sequence:REFSEQ:YP_215122.1"
+ /note="'COG: COG0667 Predicted oxidoreductases (related to
+ aryl-alcohol dehydrogenases);
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571848.1"
+ /db_xref="GI:161504735"
+ /translation="MAPYARGRDNTNKPARLGYNRNVAAIAPENPGALSLTLSPQELA
+ AIETFFPHDAAADPRYWPEIMSTLNR"
+ gene complement(2780594..2780989)
+ /locus_tag="SARI_02860"
+ CDS complement(2780594..2780989)
+ /locus_tag="SARI_02860"
+ /inference="protein motif:BlastProDom:IPR002667"
+ /inference="protein motif:Gene3D:IPR000086"
+ /inference="protein motif:HMMPfam:IPR000086"
+ /inference="protein motif:HMMTigr:IPR003561"
+ /inference="protein motif:ScanRegExp:IPR000086"
+ /inference="protein motif:superfamily:IPR000086"
+ /inference="similar to AA sequence:INSD:CAD01294.1"
+ /note="'KEGG: stt:t0141 6.4e-66 mutT;
+ 7,8-dihydro-8-oxoguanine-triphosphatase K03574;
+ COG: COG0494 NTP pyrophosphohydrolases including oxidative
+ damage repair enzymes;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="nucleoside triphosphate pyrophosphohydrolase"
+ /protein_id="YP_001571849.1"
+ /db_xref="GI:161504737"
+ /db_xref="InterPro:IPR000086"
+ /db_xref="InterPro:IPR002667"
+ /db_xref="InterPro:IPR003561"
+ /translation="MKKLQIAVGIIRNPNDEIFITRRAADAHMANKLEFPGGKIESGE
+ TPEQALIRELQEEVGITPTQVTLFDTLEYQFPDRHITLWFWLVERWEGEPWGKEGQPG
+ QWIAQSTLNADDFPPANEPIIRKLRQCAH"
+ misc_feature complement(2780609..2780980)
+ /locus_tag="SARI_02860"
+ /note="The MutT pyrophosphohydrolase is a prototypical
+ Nudix hydrolase that catalyzes the hydrolysis of
+ nucleoside and deoxynucleoside triphosphates (NTPs and
+ dNTPs) by substitution at a beta-phosphorus to yield a
+ nucleotide monophosphate (NMP) and inorganic...; Region:
+ MutT_pyrophosphohydrolase; cd03425"
+ /db_xref="CDD:239517"
+ misc_feature complement(order(2780633..2780635,2780696..2780698,
+ 2780750..2780752,2780819..2780824,2780831..2780833,
+ 2780867..2780869,2780873..2780878,2780972..2780974,
+ 2780978..2780980))
+ /locus_tag="SARI_02860"
+ /note="active site"
+ /db_xref="CDD:239517"
+ misc_feature complement(order(2780633..2780635,2780750..2780752,
+ 2780756..2780758,2780873..2780878,2780972..2780974,
+ 2780978..2780980))
+ /locus_tag="SARI_02860"
+ /note="8-oxo-dGMP binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:239517"
+ misc_feature complement(2780810..2780878)
+ /locus_tag="SARI_02860"
+ /note="nudix motif; other site"
+ /db_xref="CDD:239517"
+ misc_feature complement(order(2780819..2780824,2780831..2780833))
+ /locus_tag="SARI_02860"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:239517"
+ gene complement(2780940..2781110)
+ /locus_tag="SARI_02861"
+ CDS complement(2780940..2781110)
+ /locus_tag="SARI_02861"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571850.1"
+ /db_xref="GI:161504738"
+ /translation="MCCHQVDAGIIAEWRYAYSAWVLNTDKKAQATALFLWIQQDEKT
+ ANCGWDYPQPER"
+ gene complement(2781142..2783847)
+ /locus_tag="SARI_02862"
+ CDS complement(2781142..2783847)
+ /locus_tag="SARI_02862"
+ /inference="protein motif:HMMPfam:IPR004027"
+ /inference="protein motif:HMMPfam:IPR011115"
+ /inference="protein motif:HMMPfam:IPR011116"
+ /inference="protein motif:HMMPfam:IPR011130"
+ /inference="protein motif:HMMTigr:IPR000185"
+ /inference="protein motif:ScanRegExp:IPR000185"
+ /note="functions in protein export; can interact with
+ acidic membrane phospholipids and the SecYEG protein
+ complex; binds to preproteins; binds to ATP and undergoes
+ a conformational change to promote membrane insertion of
+ SecA/bound preprotein; ATP hydrolysis appears to drive
+ release of the preprotein from SecA and deinsertion of
+ SecA from the membrane; additional proteins SecD/F/YajC
+ aid SecA recycling; exists in an equilibrium between
+ monomers and dimers; may possibly form higher order
+ oligomers; proteins in this cluster correspond SecA1;
+ SecA2 is not essential and seems to play a role in
+ secretion of a subset of proteins"
+ /codon_start=1
+ /transl_table=11
+ /product="preprotein translocase subunit SecA"
+ /protein_id="YP_001571851.1"
+ /db_xref="GI:161504739"
+ /db_xref="InterPro:IPR000185"
+ /db_xref="InterPro:IPR004027"
+ /db_xref="InterPro:IPR011115"
+ /db_xref="InterPro:IPR011116"
+ /db_xref="InterPro:IPR011130"
+ /translation="MLIKLLTKVFGSRNDRTLRRMRKAVSLINAMEPEMEKLSDDELK
+ AKTNEFRARIEKGESVESLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNDRCIAEM
+ RTGEGKTLTATLPAYLNALSGKGVHVVTVNDYLAQRDAENNRPLFEFLGMSVGINLPG
+ MPAPAKREAYAADITYGTNNEYGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDE
+ ARTPLIISGPAEDSSEMYKKVNKIIPHLIRQEKEDSDTFQGEGHFSVDEKARQVNLTE
+ RGLVLIEELLVQEGIMDEGESLYSPGNIMLMHHVTAALRAHALFTRDVDYIVKDGEVI
+ IVDEHTGRTMQGRRWSDGLHQAVEAKEGVEIQNENQTLASITFQNYFRLYEKLAGMTG
+ TADTEAFEFSSIYKLDTVVVPTNRPMIRKDLPDLVYMTEAEKIQAIIEDIKERTANGQ
+ PVLVGTISIEKSEVVSRELTKAGIKHNVLNAKFHANEAGIVAQAGYPAAVTIATNMAG
+ RGTDIMLGGSWQAEVAALEAPTEEQIAQIKADWQARHDAVLAAGGLHIIGTERHESRR
+ IDNQLRGRSGRQGDPGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVT
+ KAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIYSQRNELLDVSDVSDTINSIRED
+ VFKATIDAYIPPQSLEEMWDIPGLQERLKNDFDLELPIAEWLDKEPELHEETLRERIL
+ AQSIELYQRKEEVVGAEMMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKD
+ PKQEYKRESFAMFAAMLESLKYEVISTLSKVQVRMPEEVEAMEMQRREEAERLALMQQ
+ LSHQDDDAAVAADLAAQTGERKIGRNDPCPCGSGKKYKQCHGRLS"
+ misc_feature complement(2781145..2783844)
+ /locus_tag="SARI_02862"
+ /note="preprotein translocase subunit SecA; Reviewed;
+ Region: PRK12904"
+ /db_xref="CDD:237259"
+ misc_feature complement(2782774..2783166)
+ /locus_tag="SARI_02862"
+ /note="SecA preprotein cross-linking domain; Region:
+ SecA_PP_bind; smart00958"
+ /db_xref="CDD:214938"
+ misc_feature complement(2781151..2781207)
+ /locus_tag="SARI_02862"
+ /note="SEC-C motif; Region: SEC-C; pfam02810"
+ /db_xref="CDD:202406"
+ gene complement(2783908..2784411)
+ /locus_tag="SARI_02863"
+ CDS complement(2783908..2784411)
+ /locus_tag="SARI_02863"
+ /inference="protein motif:HMMPfam:IPR009502"
+ /inference="similar to AA sequence:INSD:AAV76170.1"
+ /note="secM translational pause allows for the initiation
+ of secA translation"
+ /codon_start=1
+ /transl_table=11
+ /product="SecA regulator SecM"
+ /protein_id="YP_001571852.2"
+ /db_xref="GI:448236267"
+ /db_xref="InterPro:IPR009502"
+ /translation="MSGILTRWRQLGRRYFWPHLLLGMVAASLGLPALSNVAETNTPA
+ RATASNHSAASKVNFSQLALLEASNRRPNFTVDYWHQHAIRTVIRHLSFAMAPQTLLV
+ ADAPSPLQAHHIALLNTLSAMLTQEGTPPAIIRVSLAYFAPQTAFSIPAWISQAQGIR
+ AGPQRLS"
+ misc_feature complement(2783911..2784408)
+ /locus_tag="SARI_02863"
+ /note="SecA regulator SecM; Provisional; Region: PRK02943"
+ /db_xref="CDD:235088"
+ gene complement(2784494..2784685)
+ /locus_tag="SARI_02864"
+ CDS complement(2784494..2784685)
+ /locus_tag="SARI_02864"
+ /note="'Psort location: golgi, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571853.1"
+ /db_xref="GI:161504741"
+ /translation="MFELPMMVGKLRQRCFLSRWLDKRAGRQCFYLYPRLFSRIKSKY
+ GAFAVFLAIFYLCFSSLLL"
+ gene complement(2784774..2786789)
+ /locus_tag="SARI_02865"
+ CDS complement(2784774..2786789)
+ /locus_tag="SARI_02865"
+ /inference="similar to AA sequence:REFSEQ:NP_650019.2"
+ /note="'KEGG: ddi:DDB0167703 0.0025 hypothetical protein
+ K01971;
+ COG: COG5022 Myosin heavy chain;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571854.1"
+ /db_xref="GI:161504742"
+ /translation="MMLFSIISAVNGGVLSSACTHFLLDESKLVEPGIIGDNKERTLH
+ FDVLLNQLTLYPYETSDPLFISINAVTSCCGESSAYQLAISTGRFPLYESEINELMKD
+ FLYQHVVDANGHVKITFTDVCKRLNSLWRKFTEENLRTTSKDEEVVCSSYTMPVSVPE
+ KESSLDEKDEKVVCSSYTMPVSVPEKESSLDEKDEKVVCSSYTMPVSVPEKESSLDEK
+ DEKVVCSSYTMPVSVPEKESSLDEKDEKVVCSSYTMPVSVPEKESSLDEKDEKVVCSS
+ YTMSVSVPEKESSLDEKDEKVVCSSYTMSVSVPEKESSLDEKDEKVVCSSYTMSASVP
+ EKESSLDEKDEKGVCSSYTMPVSVPEKESSLDEKDEKVVCSSYTMPVSVPEKESFFDQ
+ NKLTLKDVKNFKKIQSAFKRELSSIQKSLNVLNNRKAVERFREYKTVELFLQTGVHTG
+ FCVAGGLSSAVIGTAISPGFGTLIGAGVGAGLAWSGKKLYDYAAGAVSNKINPNPHLK
+ TREIDRKIKSAEKGFFWECGAKIKSLVVEPSRGTGILAASLISSVIQEVSIPIHDIAT
+ ACYDYEIACEGLTSKKASKIEALLAKYHSKLNKEYKQVLKYLEENPTPDNQRRKKKIL
+ RRDAVIRERLATIRESIKDAVESRRLSIHKGRSVMAPDDEKRANEAI"
+ misc_feature complement(<2785344..2785433)
+ /locus_tag="SARI_02865"
+ /note="Glycine zipper; Region: Gly-zipper_Omp; cl17724"
+ /db_xref="CDD:248278"
+ gene complement(2786859..2787014)
+ /locus_tag="SARI_02866"
+ CDS complement(2786859..2787014)
+ /locus_tag="SARI_02866"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571855.1"
+ /db_xref="GI:161504743"
+ /translation="MNMADMHLSLQAITAASAEKISQWRQCYFRPILDDLCLCLEMKN
+ INQVNAW"
+ gene complement(2787376..2788293)
+ /gene="lpxC"
+ /locus_tag="SARI_02867"
+ CDS complement(2787376..2788293)
+ /gene="lpxC"
+ /locus_tag="SARI_02867"
+ /inference="protein motif:BlastProDom:IPR004463"
+ /inference="protein motif:HMMPfam:IPR004463"
+ /inference="protein motif:HMMTigr:IPR004463"
+ /inference="similar to AA sequence:INSD:AAL19098.1"
+ /note="zinc-dependent; catalyzes the deacetylation of
+ UDP-(3-O-acyl)-N-acetylglucosamine to
+ UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second
+ step of lipid A biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine
+ deacetylase"
+ /protein_id="YP_001571856.1"
+ /db_xref="GI:161504744"
+ /db_xref="InterPro:IPR004463"
+ /translation="MIKQRTLKRIVQATGVGLHTGKKVTLTLRPAPANTGVIYRRTDL
+ NPPVDFPADAKSVRDTMLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVIEVNAPEIP
+ IMDGSAAPFVYLLLDAGIDELNCAKKFVRIKETVRVEDGDKWAEFRPYNGFTLDFTID
+ FNHPAIDSSSQRYAMNFSADAFMRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVV
+ DDYRVLNEDGLRFEDEFVRHKMLDAIGDLFMCGHNIIGAFTAYKSGHALNNKLLQAVL
+ ANQEAWEFVTFQDDAELPLAFKAPSTVLA"
+ misc_feature complement(2787397..2788293)
+ /gene="lpxC"
+ /locus_tag="SARI_02867"
+ /note="UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine
+ deacetylase; Reviewed; Region: lpxC; PRK13186"
+ /db_xref="CDD:237294"
+ misc_feature complement(2787454..2788290)
+ /gene="lpxC"
+ /locus_tag="SARI_02867"
+ /note="UDP-3-O-acyl N-acetylglycosamine deacetylase;
+ Region: LpxC; pfam03331"
+ /db_xref="CDD:202596"
+ unsure 2787531..2787561
+ /note="Sequence derived from one plasmid subclone"
+ unsure 2787744..2788198
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(2788394..2789545)
+ /locus_tag="SARI_02868"
+ CDS complement(2788394..2789545)
+ /locus_tag="SARI_02868"
+ /inference="protein motif:FPrintScan:IPR000158"
+ /inference="protein motif:HMMPfam:IPR003008"
+ /inference="protein motif:HMMPfam:IPR008280"
+ /inference="protein motif:HMMTigr:IPR000158"
+ /inference="protein motif:ScanRegExp:IPR000158"
+ /inference="similar to AA sequence:REFSEQ:YP_149480.1"
+ /note="'GTPase; similar structure to tubulin; forms
+ ring-shaped polymers at the site of cell division; other
+ proteins such as FtsA, ZipA, and ZapA, interact with and
+ regulate FtsZ function'"
+ /codon_start=1
+ /transl_table=11
+ /product="cell division protein FtsZ"
+ /protein_id="YP_001571857.1"
+ /db_xref="GI:161504745"
+ /db_xref="InterPro:IPR000158"
+ /db_xref="InterPro:IPR003008"
+ /db_xref="InterPro:IPR008280"
+ /translation="MFEPMELTNDAVIKVIGVGGGGGNAVEHMVRERIEGVEFFAVNT
+ DAQALRKTAVGQTIQIGSGITKGLGAGANPEVGRNAADEDREALRAALEGADMVFIAA
+ GMGGGTGTGAAPVVAEVAKDLGILTVAVVTKPFNFEGKKRMAFAEQGITELSRHVDSL
+ ITIPNDKLLKVLGRGISLLDAFGAANDVLKGAVQGIAELITRPGLMNVDFADVRTVMS
+ EMGYAMMGSGVASGEDRAEEAAEMAISSPLLEDIDLSGARGVLVNITAGFDLRLDEFE
+ TVGNTIRAFASDNATVVIGTSLDPDMNDELRVTVVATGIGMDKRPEITLVTNKQVQQP
+ VMDRYQQHGMAPLTQEQKTVAKVVNDNTPQAAKEPDYLDIPAFLRKQAD"
+ misc_feature complement(2788397..2789545)
+ /locus_tag="SARI_02868"
+ /note="cell division protein FtsZ; Validated; Region:
+ PRK09330"
+ /db_xref="CDD:236468"
+ misc_feature complement(2788604..2789476)
+ /locus_tag="SARI_02868"
+ /note="FtsZ is a GTPase that is similar to the eukaryotic
+ tubulins and is essential for cell division in
+ prokaryotes. FtsZ is capable of polymerizing in a
+ GTP-driven process into structures similar to those formed
+ by tubulin. FtsZ forms a ring-shaped septum at...; Region:
+ FtsZ_type1; cd02201"
+ /db_xref="CDD:100021"
+ misc_feature complement(order(2788979..2788981,2788988..2788993,
+ 2789000..2789002,2789051..2789053,2789120..2789122,
+ 2789141..2789146,2789219..2789239,2789402..2789404,
+ 2789474..2789476))
+ /locus_tag="SARI_02868"
+ /note="nucleotide binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:100021"
+ misc_feature complement(order(2788721..2788723,2788730..2788741,
+ 2788919..2788921,2788925..2788930))
+ /locus_tag="SARI_02868"
+ /note="SulA interaction site; other site"
+ /db_xref="CDD:100021"
+ misc_feature complement(2788397..>2788459)
+ /locus_tag="SARI_02868"
+ /note="cell division protein FtsZ, alphaProteobacterial
+ C-terminal extension; Region: FtsZ_alphas_C; TIGR03483"
+ /db_xref="CDD:234228"
+ gene complement(2789606..2790868)
+ /gene="ftsA"
+ /locus_tag="SARI_02869"
+ CDS complement(2789606..2790868)
+ /gene="ftsA"
+ /locus_tag="SARI_02869"
+ /inference="protein motif:HMMPfam:IPR003494"
+ /inference="protein motif:HMMTigr:IPR003494"
+ /inference="similar to AA sequence:INSD:AAO67868.1"
+ /note="ATP-binding involved in recruitment of FtsK to Z
+ ring; essential cell division protein; colocalizes with
+ FtsZ through direct interaction to the septal ring
+ structure; structurally similar to eukaryotic actin; binds
+ directly to the cell membrane"
+ /codon_start=1
+ /transl_table=11
+ /product="cell division protein FtsA"
+ /protein_id="YP_001571858.1"
+ /db_xref="GI:161504746"
+ /db_xref="InterPro:IPR003494"
+ /translation="MIKATDRKLVVGLEIGTAKVAALVGEVLPDGMVNIIGVGSCPSR
+ GMDKGGVNDLESVVKCVQRAIDQAELMADCQISSVYLALSGKHISCQNEIGMVPISEE
+ EVTQEDVENVVHTAKSVRVRDEHRVLHVIPQEYAIDYQEGIKNPVGLSGVRMQAKVHL
+ ITCHNDMAKNIVKAVERCGLKVDQLIFAGLAASYSVLTEDERELGVCVVDIGGGTMDI
+ AVYTGGALRHTKVIPYAGNVVTSDIAYAFGTPPSDAEAIKVRHGCALGSIVGKDESVE
+ VPSVGGRPPRSLQRQTLAEVIEPRYTELLNLVNEEILQLQEQLRQQGVKHHLAAGIVL
+ TGGAAQIEGLAACAQRVFHTQVRIGAPLNITGLTDYAQEPYYSTAVGLLHYGKESHLN
+ GEAEVEKRVTASVGSWIKRLNSWLRKEF"
+ misc_feature complement(2789609..2790868)
+ /gene="ftsA"
+ /locus_tag="SARI_02869"
+ /note="cell division protein FtsA; Reviewed; Region: ftsA;
+ PRK09472"
+ /db_xref="CDD:181887"
+ misc_feature complement(<2790185..2790568)
+ /gene="ftsA"
+ /locus_tag="SARI_02869"
+ /note="Nucleotide-Binding Domain of the sugar
+ kinase/HSP70/actin superfamily; Region:
+ NBD_sugar-kinase_HSP70_actin; cd00012"
+ /db_xref="CDD:212657"
+ misc_feature complement(2789792..2790253)
+ /gene="ftsA"
+ /locus_tag="SARI_02869"
+ /note="Cell division protein FtsA; Region: FtsA;
+ pfam14450"
+ /db_xref="CDD:222760"
+ gene complement(2790865..2791695)
+ /locus_tag="SARI_02870"
+ CDS complement(2790865..2791695)
+ /locus_tag="SARI_02870"
+ /inference="protein motif:HMMPfam:IPR005548"
+ /inference="protein motif:HMMPfam:IPR013685"
+ /inference="similar to AA sequence:INSD:CAD01288.1"
+ /note="involved in septum formation"
+ /codon_start=1
+ /transl_table=11
+ /product="cell division protein FtsQ"
+ /protein_id="YP_001571859.2"
+ /db_xref="GI:448236268"
+ /db_xref="InterPro:IPR005548"
+ /db_xref="InterPro:IPR013685"
+ /translation="MSQAALNTRNSDEETPSSRRNNGTRLVGMIFLLTVLCTVFVSGW
+ VVLRWMEDAQRLPLSKLVLTGERHYTRNDDIRQAILALGAPGTFMTQDVNIIQSQIER
+ LPWIKQASVRKQWPDELKIHLVEYVPIARWNDQHMVDAEGNTFSVPSDRIGKQVLPML
+ YGPEGSASEVLQGYREMGQVLAKDKFTLKEAAMTARRSWQLTLNNGIKLNLGRGDTMK
+ RLARFVELYPVLQQQAQTDGKRISYVDLRYDSGAAVGWAPLPPEESNQQQNQAQAEQQ
+ "
+ misc_feature complement(2790913..2791695)
+ /locus_tag="SARI_02870"
+ /note="cell division protein FtsQ; Provisional; Region:
+ PRK10775"
+ /db_xref="CDD:182720"
+ misc_feature complement(2791318..2791524)
+ /locus_tag="SARI_02870"
+ /note="POTRA domain, FtsQ-type; Region: POTRA_1;
+ pfam08478"
+ /db_xref="CDD:219857"
+ misc_feature complement(2790955..2791311)
+ /locus_tag="SARI_02870"
+ /note="Cell division protein FtsQ; Region: FtsQ;
+ pfam03799"
+ /db_xref="CDD:217736"
+ gene complement(2791697..2792617)
+ /gene="ddl"
+ /locus_tag="SARI_02871"
+ CDS complement(2791697..2792617)
+ /gene="ddl"
+ /locus_tag="SARI_02871"
+ /inference="protein motif:Gene3D:IPR013816"
+ /inference="protein motif:Gene3D:IPR013817"
+ /inference="protein motif:HMMPfam:IPR011095"
+ /inference="protein motif:HMMPfam:IPR011127"
+ /inference="protein motif:HMMTigr:IPR005905"
+ /inference="protein motif:ScanRegExp:IPR000291"
+ /inference="similar to AA sequence:INSD:AAV76165.1"
+ /note="D-alanine--D-alanine ligase; DdlA; DdlB;
+ cytoplasmic; catalyzes the formation of D-alanyl-D-alanine
+ from two D-alanines in peptidoglycan synthesis; there are
+ two forms of this enzyme in Escherichia coli"
+ /codon_start=1
+ /transl_table=11
+ /product="D-alanine--D-alanine ligase"
+ /protein_id="YP_001571860.1"
+ /db_xref="GI:161504748"
+ /db_xref="InterPro:IPR000291"
+ /db_xref="InterPro:IPR005905"
+ /db_xref="InterPro:IPR011095"
+ /db_xref="InterPro:IPR011127"
+ /db_xref="InterPro:IPR013816"
+ /db_xref="InterPro:IPR013817"
+ /translation="MADKIAVLLGGASAEREVSLESGAAVLAGLREGGIDAHPVDPKE
+ VDVAQLKAMGFQKAFIALHGRGGEDGTLQGMLELLGLPYTGSGVMASALSMDKLRSKL
+ LWQGAGLLVAPWFALTRAGFEKGLSEEQKARISALGLPLIVKPGREGSSVGMTKVVEE
+ NALQGALALAFQHDDEVLIEKWLCGPEFTVAILGEEILPSIRIQPAGTFYDYEAKYLS
+ DETQYFCPAGLEASQEAALQLLVLQAWKALGCKGWGRIDVMLNSDGQFYLLEANTSPG
+ MTSHSLVPMAARQAGMSFSQLVVRILELAD"
+ misc_feature complement(2791700..2792617)
+ /gene="ddl"
+ /locus_tag="SARI_02871"
+ /note="D-alanine--D-alanine ligase; Reviewed; Region: ddl;
+ PRK01372"
+ /db_xref="CDD:234948"
+ misc_feature complement(2792360..2792608)
+ /gene="ddl"
+ /locus_tag="SARI_02871"
+ /note="D-ala D-ala ligase N-terminus; Region:
+ Dala_Dala_lig_N; pfam01820"
+ /db_xref="CDD:216721"
+ misc_feature complement(2791709..2792311)
+ /gene="ddl"
+ /locus_tag="SARI_02871"
+ /note="D-ala D-ala ligase C-terminus; Region:
+ Dala_Dala_lig_C; pfam07478"
+ /db_xref="CDD:203643"
+ gene complement(2792610..2794085)
+ /gene="murC"
+ /locus_tag="SARI_02872"
+ CDS complement(2792610..2794085)
+ /gene="murC"
+ /locus_tag="SARI_02872"
+ /inference="protein motif:HMMPfam:IPR000713"
+ /inference="protein motif:HMMPfam:IPR004101"
+ /inference="protein motif:HMMPfam:IPR013221"
+ /inference="protein motif:HMMPIR:IPR012237"
+ /inference="protein motif:HMMTigr:IPR005758"
+ /inference="similar to AA sequence:INSD:CAD01286.1"
+ /note="Catalyzes the formation of
+ UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate
+ and L-alanine in peptidoglycan synthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="UDP-N-acetylmuramate--L-alanine ligase"
+ /protein_id="YP_001571861.1"
+ /db_xref="GI:161504749"
+ /db_xref="InterPro:IPR000713"
+ /db_xref="InterPro:IPR004101"
+ /db_xref="InterPro:IPR005758"
+ /db_xref="InterPro:IPR012237"
+ /db_xref="InterPro:IPR013221"
+ /translation="MNTQQLAKLRSIVPEMRRVRHIHFVGIGGAGMGGIAEVLANEGY
+ QISGSDLAPNPVTQQLTSLGATIFFNHRPENVRDASVVVVSSAISADNPEIVAAHEAR
+ IPVIRRAEMLAELMRFRHGIAIAGTHGKTTTTAMVSSIYAEAGLDPTFVNGGLVKAAG
+ VHARLGHSRYLIAEADESDASFLHLQPMVAIVTNIEADHMDTYHGDFENLKQTFINFL
+ HNLPFYGRAVMCVDDPVIRELLPRVGRQTTTYGFSDDADVRVEDYQQIGPQGHFTLLR
+ QGMPDLRVTLNAPGRHNALNATAAVAVATEEGIDDDAILRALESFQGTGRRFDFLGEF
+ PLEPVNGKSGTAMLVDDYGHHPTEVDATIKAARAGWPDKNLVMLFQPHRYTRTRDLYD
+ DFANVLTQVDALLMLDVYPAGETPIPGADSRSLCRTIRNRGKIDPILVSDPAQIATIL
+ APVLTGNDLILVQGAGNVGKIARYLSEIKLKPQTQEEEQHG"
+ misc_feature complement(2792634..2794049)
+ /gene="murC"
+ /locus_tag="SARI_02872"
+ /note="UDP-N-acetylmuramate--L-alanine ligase;
+ Provisional; Region: murC; PRK00421"
+ /db_xref="CDD:234757"
+ misc_feature complement(2793726..2794025)
+ /gene="murC"
+ /locus_tag="SARI_02872"
+ /note="Mur ligase family, catalytic domain; Region:
+ Mur_ligase; pfam01225"
+ /db_xref="CDD:216373"
+ misc_feature complement(2793204..2793710)
+ /gene="murC"
+ /locus_tag="SARI_02872"
+ /note="Mur ligase middle domain; Region: Mur_ligase_M;
+ pfam08245"
+ /db_xref="CDD:219763"
+ misc_feature complement(2792826..2793080)
+ /gene="murC"
+ /locus_tag="SARI_02872"
+ /note="Mur ligase family, glutamate ligase domain; Region:
+ Mur_ligase_C; pfam02875"
+ /db_xref="CDD:217262"
+ gene complement(2794203..2795270)
+ /gene="murG"
+ /locus_tag="SARI_02873"
+ CDS complement(2794203..2795270)
+ /gene="murG"
+ /locus_tag="SARI_02873"
+ /inference="protein motif:HMMPfam:IPR004276"
+ /inference="protein motif:HMMPfam:IPR007235"
+ /inference="protein motif:HMMTigr:IPR006009"
+ /note="UDP-N-acetylglucosamine--N-acetylmuramyl-
+ (pentapeptide) pyrophosphoryl-undecaprenol
+ N-acetylglucosamine transferase; involved in cell wall
+ formation; inner membrane-associated; last step of
+ peptidoglycan synthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="undecaprenyldiphospho-muramoylpentapeptide
+ beta-N- acetylglucosaminyltransferase"
+ /protein_id="YP_001571862.1"
+ /db_xref="GI:161504750"
+ /db_xref="InterPro:IPR004276"
+ /db_xref="InterPro:IPR006009"
+ /db_xref="InterPro:IPR007235"
+ /translation="MSGQPKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADR
+ MEADLVPKHGINIEFIRISGLRGKGVKALLAAPLRIFNAWRQARAIMKRFKPDVVLGM
+ GGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTNKWLAKIATTVMQAFPGAFPNAEVVGN
+ PVRTDVLALPLPQTRLVSRDGPIRVLVVGGSQGARVLNQTLPQVAARLGDAVTIWHQS
+ GKGAQHTVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPA
+ IFVPFQHKDRQQYWNALPLENAGAAKILEQPQFTAEAVADTLAGWSRDTLLTMAERAR
+ AVSILDATERVASEVIRVART"
+ misc_feature complement(2794209..2795258)
+ /gene="murG"
+ /locus_tag="SARI_02873"
+ /note="undecaprenyldiphospho-muramoylpentapeptide beta-N-
+ acetylglucosaminyltransferase; Provisional; Region: murG;
+ PRK00726"
+ /db_xref="CDD:234825"
+ misc_feature complement(2794227..2795252)
+ /gene="murG"
+ /locus_tag="SARI_02873"
+ /note="MurG is an N-acetylglucosaminyltransferase, the
+ last enzyme involved in the intracellular phase of
+ peptidoglycan biosynthesis. It transfers
+ N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4
+ hydroxyl of a lipid-linked N-acetylmuramoyl
+ pentapeptide...; Region: GT1_MurG; cd03785"
+ /db_xref="CDD:99961"
+ misc_feature complement(order(2794398..2794400,2794407..2794412,
+ 2794428..2794430,2794467..2794469,2794476..2794487,
+ 2794530..2794532,2794542..2794544,2794620..2794622,
+ 2794698..2794700,2794890..2794892,2795220..2795222))
+ /gene="murG"
+ /locus_tag="SARI_02873"
+ /note="active site"
+ /db_xref="CDD:99961"
+ misc_feature complement(order(2794848..2794850,2794923..2794925,
+ 2795007..2795009,2795040..2795042,2795049..2795051))
+ /gene="murG"
+ /locus_tag="SARI_02873"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99961"
+ gene complement(2795267..2796484)
+ /locus_tag="SARI_02874"
+ CDS complement(2795267..2796484)
+ /locus_tag="SARI_02874"
+ /inference="protein motif:HMMPfam:IPR001182"
+ /inference="protein motif:HMMTigr:IPR013437"
+ /inference="protein motif:ScanRegExp:IPR001182"
+ /inference="similar to AA sequence:INSD:AAO67863.1"
+ /note="integral membrane protein involved in stabilizing
+ FstZ ring during cell division"
+ /codon_start=1
+ /transl_table=11
+ /product="cell division protein FtsW"
+ /protein_id="YP_001571863.1"
+ /db_xref="GI:161504751"
+ /db_xref="InterPro:IPR001182"
+ /db_xref="InterPro:IPR013437"
+ /translation="MPRVPGFGLLAWLFAALKGWVMASRDKDADSLIMYDRTLLWLTF
+ GLAAIGFVMVTSASMPVGQRLANDPFLFAKRDALYIFLAFCLAMVTLRLPMTFWQKYS
+ TTMLIASIIMLLIVLVVGSSVNGASRWIALGPLRIQPAEFTKLSLFCYLANYLVRKVD
+ EVRNNLRGFLKPMGVILVLAVLLLAQPDLGTVVVLFVTTLAMLFLAGAKLWQFIAIIG
+ MGISAVILLILAEPYRIRRVTSFWNPWEDPFGSGYQLTQSLMAFGRGEIWGQGLGNSV
+ QKLEYLPEAHTDFIFAIIGEELGYIGVVLALLMVFFVAFRAMSIGRKALQIDHRFSGF
+ LACSIGIWFSFQALVNVGAAAGMLPTKGLTLPLISYGGSSLLIMSTAIMFLLRIDYET
+ RLEKAQAFTRGSR"
+ misc_feature complement(2795270..2796481)
+ /locus_tag="SARI_02874"
+ /note="cell division protein FtsW; Provisional; Region:
+ PRK10774"
+ /db_xref="CDD:182719"
+ gene complement(2796511..2797827)
+ /gene="murD"
+ /locus_tag="SARI_02875"
+ CDS complement(2796511..2797827)
+ /gene="murD"
+ /locus_tag="SARI_02875"
+ /inference="protein motif:HMMPfam:IPR004101"
+ /inference="protein motif:HMMPfam:IPR013221"
+ /inference="protein motif:HMMPIR:IPR012237"
+ /inference="protein motif:HMMTigr:IPR005762"
+ /inference="protein motif:ScanRegExp:IPR006162"
+ /inference="similar to AA sequence:REFSEQ:YP_149473.1"
+ /note="UDP-N-acetylmuramoylalanine--D-glutamate ligase;
+ involved in peptidoglycan biosynthesis; cytoplasmic;
+ catalyzes the addition of glutamate to the nucleotide
+ precursor UDP-N-acetylmuramoyl-L-alanine during cell wall
+ formation"
+ /codon_start=1
+ /transl_table=11
+ /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
+ synthetase"
+ /protein_id="YP_001571864.1"
+ /db_xref="GI:161504752"
+ /db_xref="InterPro:IPR004101"
+ /db_xref="InterPro:IPR005762"
+ /db_xref="InterPro:IPR006162"
+ /db_xref="InterPro:IPR012237"
+ /db_xref="InterPro:IPR013221"
+ /translation="MADYQSKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRVTPPGL
+ DKLPQEIERHVGGLNDEWLLAADLIVASPGIALANPSLSAAASAGVEIVGDIELFCRE
+ AQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPALMLLDADRELYVLELS
+ SFQLETTSSLQAVAATVLNVTEDHMDRYPFGLQQYRAAKLSVYENAKVCVVNADDALT
+ MPVRGADERCVSFGVNMGDYHLNRQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAA
+ LALADAAGLPRASSLKALTTFTGLAHRFQLALEHNGVRWINDSKATNVGSTEAALNGL
+ HVDGTLHLLLGGDGKSADFSSLARYLTGDRIRLYCFGRDGAQLAALRPEIAEQTETME
+ EAMRLLAPRVQSGDMVLLSPACASLDQFKSFEQRGDVFTRLAKELG"
+ misc_feature complement(2796514..2797827)
+ /gene="murD"
+ /locus_tag="SARI_02875"
+ /note="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
+ synthetase; Provisional; Region: murD; PRK03806"
+ /db_xref="CDD:179651"
+ misc_feature complement(2797018..2797497)
+ /gene="murD"
+ /locus_tag="SARI_02875"
+ /note="Mur ligase middle domain; Region: Mur_ligase_M;
+ pfam08245"
+ /db_xref="CDD:219763"
+ misc_feature complement(<2796832..2796924)
+ /gene="murD"
+ /locus_tag="SARI_02875"
+ /note="Mur ligase family, glutamate ligase domain; Region:
+ Mur_ligase_C; pfam02875"
+ /db_xref="CDD:217262"
+ gene complement(2797830..2798912)
+ /gene="mraY"
+ /locus_tag="SARI_02876"
+ CDS complement(2797830..2798912)
+ /gene="mraY"
+ /locus_tag="SARI_02876"
+ /inference="protein motif:HMMPanther:IPR003524"
+ /inference="protein motif:HMMPfam:IPR000715"
+ /inference="protein motif:HMMTigr:IPR003524"
+ /inference="protein motif:ScanRegExp:IPR003524"
+ /inference="similar to AA sequence:INSD:CAD01282.1"
+ /note="First step of the lipid cycle reactions in the
+ biosynthesis of the cell wall peptidoglycan"
+ /codon_start=1
+ /transl_table=11
+ /product="phospho-N-acetylmuramoyl-pentapeptide-
+ transferase"
+ /protein_id="YP_001571865.1"
+ /db_xref="GI:161504753"
+ /db_xref="InterPro:IPR000715"
+ /db_xref="InterPro:IPR003524"
+ /translation="MLVWLAEHLVKYYSGFNVFSYLTFRAIVSLLTALFISLWMGPRM
+ IARLQKLSFGQVVRNDGPESHFSKRGTPTMGGIMILTAIVISVLLWAYPSNPYVWCVL
+ VVLIGYGIIGFVDDYRKVVRKDTKGLIARWKYFWMSVIALGVAFALYLVGKDTPATQL
+ VVPFFKDVMPQLGLFYILLSYFVIVGTGNAVNLTDGLDGLAIMPTVFVAAGFALVAWA
+ TGNMNFANYLHIPYLRHAGELVIVCTAIVGAGLGFLWFNTYPAQVFMGDVGSLALGGA
+ LGIIAVLLRQEFLLVIMGGVFVVETLSVILQVGSFKLRGQRIFRMAPIHHHYELKGWP
+ EPRVIVRFWIISLMLVLIGLATLKVR"
+ misc_feature complement(2797833..2798867)
+ /gene="mraY"
+ /locus_tag="SARI_02876"
+ /note="phospho-N-acetylmuramoyl-pentapeptide-transferase;
+ Provisional; Region: mraY; PRK00108"
+ /db_xref="CDD:234638"
+ misc_feature complement(2797845..2798732)
+ /gene="mraY"
+ /locus_tag="SARI_02876"
+ /note="Phospho-N-acetylmuramoyl-pentapeptide-transferase
+ (mraY) is an enzyme responsible for the formation of the
+ first lipid intermediate in the synthesis of bacterial
+ cell wall peptidoglycan. It catalyzes the formation of...;
+ Region: GT_MraY; cd06852"
+ /db_xref="CDD:133462"
+ misc_feature complement(2798565..2798570)
+ /gene="mraY"
+ /locus_tag="SARI_02876"
+ /note="Mg++ binding site [ion binding]; other site"
+ /db_xref="CDD:133462"
+ misc_feature complement(2798112..2798123)
+ /gene="mraY"
+ /locus_tag="SARI_02876"
+ /note="putative catalytic motif [active]"
+ /db_xref="CDD:133462"
+ misc_feature complement(order(2797932..2797946,2797962..2797964))
+ /gene="mraY"
+ /locus_tag="SARI_02876"
+ /note="putative substrate binding site [chemical binding];
+ other site"
+ /db_xref="CDD:133462"
+ gene complement(2798906..2800264)
+ /gene="murF"
+ /locus_tag="SARI_02877"
+ CDS complement(2798906..2800264)
+ /gene="murF"
+ /locus_tag="SARI_02877"
+ /inference="protein motif:HMMPfam:IPR000713"
+ /inference="protein motif:HMMPfam:IPR004101"
+ /inference="protein motif:HMMPfam:IPR013221"
+ /inference="protein motif:HMMPIR:IPR012237"
+ /inference="protein motif:HMMTigr:IPR005863"
+ /inference="similar to AA sequence:REFSEQ:YP_149471.1"
+ /note="'KEGG: spt:SPA0126 5.0e-233 murF;
+ UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diami
+ nopimelate--D-alan alanyl ligase K01929;
+ COG: COG0770 UDP-N-acetylmuramyl pentapeptide synthase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
+ alanine ligase"
+ /protein_id="YP_001571866.1"
+ /db_xref="GI:161504754"
+ /db_xref="InterPro:IPR000713"
+ /db_xref="InterPro:IPR004101"
+ /db_xref="InterPro:IPR005863"
+ /db_xref="InterPro:IPR012237"
+ /db_xref="InterPro:IPR013221"
+ /translation="MISVTLSKIADVLGAEHRGADLTLDTVITDTRKVTPGCLFVALK
+ GERFDAHDFADKAKANGAGALLVSRPLDIDLPQVIVKDTRQAFGQLAAWVRMQVPARV
+ VALTGSSGKTSVKEMTAAILSQCGNTLYTAGNFNNDIGVPITLLRLNHDYDYAVIELG
+ ANHQGEIAWTVSLTRPEAALVNNLAAAHLEGFGSLAGVAKAKGEIYTGLPENGIAIMN
+ ADNNDWLNWQSIIGDRQVWRFSPNAANSDFTAANIHVTSHGTEFTLQTPRGSIDVLLP
+ LPGRHNIANALAAAALSMAVGATLTTIKAGLATLKAVPGRLFPVQLSENQLVLDDAYN
+ ANVGSMTAAVQVLSEMPGYRVLVVGDMAELGAESEACHIQVGEAAKAAGIDRVLSTGK
+ RSQAISHASGVGEHFADKAALIARLKALLQEQPMMTILVKGSRSAAMEDVVHALQEKG
+ SC"
+ misc_feature complement(2798909..2800264)
+ /gene="murF"
+ /locus_tag="SARI_02877"
+ /note="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine
+ ligase; Reviewed; Region: murF; PRK10773"
+ /db_xref="CDD:182718"
+ misc_feature complement(2799980..2800180)
+ /gene="murF"
+ /locus_tag="SARI_02877"
+ /note="Mur ligase family, catalytic domain; Region:
+ Mur_ligase; pfam01225"
+ /db_xref="CDD:216373"
+ misc_feature complement(2799416..2799949)
+ /gene="murF"
+ /locus_tag="SARI_02877"
+ /note="Mur ligase middle domain; Region: Mur_ligase_M;
+ pfam08245"
+ /db_xref="CDD:219763"
+ misc_feature complement(2799092..2799328)
+ /gene="murF"
+ /locus_tag="SARI_02877"
+ /note="Mur ligase family, glutamate ligase domain; Region:
+ Mur_ligase_C; pfam02875"
+ /db_xref="CDD:217262"
+ gene complement(2800261..2801748)
+ /gene="murE"
+ /locus_tag="SARI_02878"
+ CDS complement(2800261..2801748)
+ /gene="murE"
+ /locus_tag="SARI_02878"
+ /inference="protein motif:HMMPfam:IPR000713"
+ /inference="protein motif:HMMPfam:IPR004101"
+ /inference="protein motif:HMMPfam:IPR013221"
+ /inference="protein motif:HMMPIR:IPR012237"
+ /inference="protein motif:HMMTigr:IPR005761"
+ /inference="similar to AA sequence:REFSEQ:NP_459128.1"
+ /note="involved in cell wall formation; peptidoglycan
+ synthesis; cytoplasmic enzyme; catalyzes the addition of
+ meso-diaminopimelic acid to the nucleotide precursor
+ UDP-N-aceylmuramoyl-l-alanyl-d-glutamate"
+ /codon_start=1
+ /transl_table=11
+ /product="UDP-N-acetylmuramoylalanyl-D-glutamate--2,
+ 6-diaminopimelate ligase"
+ /protein_id="YP_001571867.1"
+ /db_xref="GI:161504755"
+ /db_xref="InterPro:IPR000713"
+ /db_xref="InterPro:IPR004101"
+ /db_xref="InterPro:IPR005761"
+ /db_xref="InterPro:IPR012237"
+ /db_xref="InterPro:IPR013221"
+ /translation="MADRNLRDLLAPWVAGLPARELREMTLDSRVAAAGDLFVAVVGH
+ QADGRRYIPQAIAQGVAAIIAEARDEATDGEIREMHGVPVVYLSQLNERLSALAGRFY
+ HEPSENMRLVAVTGTNGKTTTTQLLAQWSQLLGETSAVMGTVGNGLLGKVIPTENTTG
+ SAVDVQHVLASLVAQGATFGAMEVSSHGLVQHRVAALKFAASVFTNLSRDHLDYHGDM
+ AHYEAAKWMLYSTHHHGQAIVNADDEVGRRWLASLPDAVAVSMEGHINPNCHGRWLKA
+ EAVDYHDRGATIRFASSWGEGEIESRLMGAFNVSNLLLALATLLALGYPLTDLLKTAA
+ RLQPVCGRMEVFSAAGKATVVVDYAHTPDALEKALQAARLHCAGKLWCVFGCGGDRDK
+ GKRPLMGAIAEEFADIVVVTDDNPRTEEPRAIINDILAGMLDAGQVRVMEGRAEAVTN
+ AIMQAKDNDVVLIAGKGHEDYQIVGTQRLDYSDRVTAARLLGVIA"
+ misc_feature complement(2800267..2801748)
+ /gene="murE"
+ /locus_tag="SARI_02878"
+ /note="UDP-N-acetylmuramoylalanyl-D-glutamate--2,
+ 6-diaminopimelate ligase; Provisional; Region: murE;
+ PRK00139"
+ /db_xref="CDD:234660"
+ misc_feature complement(2801443..2801676)
+ /gene="murE"
+ /locus_tag="SARI_02878"
+ /note="Mur ligase family, catalytic domain; Region:
+ Mur_ligase; pfam01225"
+ /db_xref="CDD:216373"
+ misc_feature complement(2800822..2801358)
+ /gene="murE"
+ /locus_tag="SARI_02878"
+ /note="Mur ligase middle domain; Region: Mur_ligase_M;
+ pfam08245"
+ /db_xref="CDD:219763"
+ misc_feature complement(2800474..2800734)
+ /gene="murE"
+ /locus_tag="SARI_02878"
+ /note="Mur ligase family, glutamate ligase domain; Region:
+ Mur_ligase_C; pfam02875"
+ /db_xref="CDD:217262"
+ gene complement(2801735..2803489)
+ /locus_tag="SARI_02879"
+ CDS complement(2801735..2803489)
+ /locus_tag="SARI_02879"
+ /inference="protein motif:HMMPfam:IPR001460"
+ /inference="protein motif:HMMPfam:IPR005311"
+ /inference="protein motif:superfamily:IPR005311"
+ /inference="protein motif:superfamily:IPR012338"
+ /note="'KEGG: stt:t0126 0. ftsI; penicillin-binding
+ protein 3 precursor K03587;
+ COG: COG0768 Cell division protein FtsI/penicillin-binding
+ protein 2;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571868.1"
+ /db_xref="GI:161504756"
+ /db_xref="InterPro:IPR001460"
+ /db_xref="InterPro:IPR005311"
+ /db_xref="InterPro:IPR012338"
+ /translation="MTRINSKRQEEQTNFISWRFALLCGCILLALVFLLGRAAWLQII
+ APDMLVRQGDMRSLRVQEVSTSRGMITDRSGRPLAVSVPVKAIWADPKEVHDAGGISV
+ GDRWKALSTALNIPLDQLSARINANPKGRFIYLARQVNPDMADYIKKLKLPGIHLREE
+ SRRYYPSGEVTAHLIGFTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVIEDIS
+ STDSQAAHNLALSIDERLQALVYRELNNAVAFNKAESGSAVLVDVNTGEVLAMANSPS
+ YNPNNLAGTPKDAMRNRTITDVFEPGSTVKPMVVMTALQRGIVNENTVLNTVPYRING
+ HEIKDVARYSELTLTGVLQKSSNVGVSKLALAMPSSALVDTYSRFGLGKATNLGLVGE
+ RSGLYPQKQRWSDIERATFSFGYGLMVTPLQLARVYATIGSYGIYRPLSITKVDPPVP
+ GERIFPESTVRTVVHMMESVALPGGGGVKAAIKGYRIAIKTGTAKKVGPDGRYINKYI
+ AYTAGVAPASQPRFALVVVINDPQAGKYYGGAVSAPVFGAIMGGVLRTMNIEPDALAT
+ GEKNEFVINQGEGTGGRS"
+ misc_feature complement(2801765..2803471)
+ /locus_tag="SARI_02879"
+ /note="peptidoglycan synthase FtsI; Provisional; Region:
+ PRK15105"
+ /db_xref="CDD:185060"
+ misc_feature complement(2802836..2803291)
+ /locus_tag="SARI_02879"
+ /note="Penicillin-binding Protein dimerisation domain;
+ Region: PBP_dimer; pfam03717"
+ /db_xref="CDD:217689"
+ misc_feature complement(2801840..2802724)
+ /locus_tag="SARI_02879"
+ /note="Penicillin binding protein transpeptidase domain;
+ Region: Transpeptidase; pfam00905"
+ /db_xref="CDD:216183"
+ gene complement(2803486..2803626)
+ /locus_tag="SARI_02880"
+ CDS complement(2803486..2803626)
+ /locus_tag="SARI_02880"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571869.1"
+ /db_xref="GI:161504757"
+ /translation="MKAAVKTLYVKAFMVHQGGKHMNPQELTQVSDWGRCAQSTQRLL
+ EG"
+ gene complement(2803642..2804007)
+ /locus_tag="SARI_02881"
+ CDS complement(2803642..2804007)
+ /locus_tag="SARI_02881"
+ /inference="protein motif:HMMPfam:IPR007082"
+ /inference="protein motif:HMMTigr:IPR011922"
+ /inference="similar to AA sequence:INSD:CAD01278.1"
+ /note="membrane bound cell division protein at septum
+ containing leucine zipper motif"
+ /codon_start=1
+ /transl_table=11
+ /product="cell division protein FtsL"
+ /protein_id="YP_001571870.1"
+ /db_xref="GI:161504758"
+ /db_xref="InterPro:IPR007082"
+ /db_xref="InterPro:IPR011922"
+ /translation="MISRVTEALSKVKGSPGITNRHALPGVIGDDLLRFGKLPLCLFI
+ CIILTAVTVVTTAHHTRLLTAQREQLVLERDALDIEWRNLILEENALGDHSRVERIAT
+ EKLQMQHVDPSQENIVVQK"
+ misc_feature complement(2803645..2803959)
+ /locus_tag="SARI_02881"
+ /note="cell division protein FtsL; Provisional; Region:
+ PRK10772"
+ /db_xref="CDD:182717"
+ gene complement(2804004..2804945)
+ /gene="mraW"
+ /locus_tag="SARI_02882"
+ CDS complement(2804004..2804945)
+ /gene="mraW"
+ /locus_tag="SARI_02882"
+ /inference="protein motif:BlastProDom:IPR002903"
+ /inference="protein motif:HMMPanther:IPR002903"
+ /inference="protein motif:HMMPfam:IPR002903"
+ /inference="protein motif:HMMTigr:IPR002903"
+ /inference="similar to AA sequence:SwissProt:Q8ZRU8"
+ /note="'KEGG: stm:STM0120 4.4e-161 yabC; putative
+ S-adenosyl meTHIonine adenyltransferase K03438;
+ COG: COG0275 Predicted S-adenosylmeTHIonine-dependent
+ methyltransferase involved in cell envelope biogenesis;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="S-adenosyl-methyltransferase MraW"
+ /protein_id="YP_001571871.1"
+ /db_xref="GI:161504759"
+ /db_xref="InterPro:IPR002903"
+ /translation="MMENFKHTTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQ
+ LGEEGRLLAIDRDPQAIAVAQAINDPRFSIIHGPFSALADYVAERELTGKIDGILLDL
+ GVSSPQLDDAERGFSFMRDGPLDMRMDPTRGQSAAEWLQTAEEADIAWVLKTFGEERF
+ AKRIARAIVERNREQPMTRTKELAEVVAAATPVKDKFKHPATRTFQAVRIWVNSELEE
+ IEQALKSSLSVLAPGGRLSIISFHSLEDRIVKRFMREQSRGPQVPAGLPMTEAQLKKL
+ GGRELRVLGKLMPGEKEVAENPRARSSVLRIAERTNA"
+ misc_feature complement(2804013..2804936)
+ /gene="mraW"
+ /locus_tag="SARI_02882"
+ /note="16S rRNA (cytosine(1402)-N(4))-methyltransferase;
+ Region: TIGR00006"
+ /db_xref="CDD:232778"
+ misc_feature complement(2804010..2804933)
+ /gene="mraW"
+ /locus_tag="SARI_02882"
+ /note="16S rRNA m(4)C1402 methyltranserfase; Provisional;
+ Region: PRK00050"
+ /db_xref="CDD:234597"
+ gene complement(2804947..2805441)
+ /locus_tag="SARI_02883"
+ CDS complement(2804947..2805441)
+ /locus_tag="SARI_02883"
+ /inference="protein motif:BlastProDom:IPR003444"
+ /inference="protein motif:HMMPfam:IPR003444"
+ /inference="protein motif:HMMTigr:IPR003444"
+ /inference="similar to AA sequence:SwissProt:Q8ZRU9"
+ /note="MraZ; UPF0040; crystal structure shows similarity
+ to AbrB"
+ /codon_start=1
+ /transl_table=11
+ /product="cell division protein MraZ"
+ /protein_id="YP_001571872.1"
+ /db_xref="GI:161504760"
+ /db_xref="InterPro:IPR003444"
+ /translation="MWDKVVERGETGMFRGATLVNLDSKGRLTVPTRYREQLIESATG
+ QMVCTIDIHHPCLLLYPLPEWEIIEQKLSRLSSMNPVERRVQRLLLGHASECQMDGAG
+ RLLIAPVLRQHAGLTKEVMLVGQFNKFELWDETTWYQQVREDIDAEQSATETLSERLQ
+ DLSL"
+ misc_feature complement(2804953..2805405)
+ /locus_tag="SARI_02883"
+ /note="mraZ protein; Region: TIGR00242"
+ /db_xref="CDD:129345"
+ misc_feature complement(2805178..2805405)
+ /locus_tag="SARI_02883"
+ /note="MraZ protein; Region: MraZ; pfam02381"
+ /db_xref="CDD:111290"
+ misc_feature complement(2804959..2805177)
+ /locus_tag="SARI_02883"
+ /note="MraZ protein; Region: MraZ; pfam02381"
+ /db_xref="CDD:111290"
+ gene complement(2806013..2807017)
+ /locus_tag="SARI_02884"
+ CDS complement(2806013..2807017)
+ /locus_tag="SARI_02884"
+ /inference="protein motif:HMMPfam:IPR000843"
+ /inference="protein motif:HMMPfam:IPR001761"
+ /inference="protein motif:HMMSmart:IPR000843"
+ /inference="protein motif:HMMTigr:IPR012781"
+ /inference="protein motif:ScanRegExp:IPR000843"
+ /inference="protein motif:superfamily:IPR010982"
+ /inference="similar to AA sequence:INSD:AAL19082.1"
+ /note="binds D-fructose as an inducer; involved in
+ regulation of operons for central pathways of carbon
+ metabolism"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional regulator FruR"
+ /protein_id="YP_001571873.1"
+ /db_xref="GI:161504761"
+ /db_xref="InterPro:IPR000843"
+ /db_xref="InterPro:IPR001761"
+ /db_xref="InterPro:IPR010982"
+ /db_xref="InterPro:IPR012781"
+ /translation="MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVRE
+ HNYHPNAVAAGLRAGRTRSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSEDQ
+ PDNEMRCIEHLLQRQVDAIIVSTSLPPEHPFYQRWANDSFPIVALDRALDREHFTSVV
+ GADQDDAEMLAEELRKFPAETVLYLGALPELSVSFLREQGFRTAWKDDPREVNFLYAN
+ SYEREAAAQLFEKWLETHPMPQALFTTSFALLQGVMDVTLRRDGKLPSDLAIATFGDH
+ ELLDFLQCPVLAVAQRHRDVAERVLEIVLASLDEPRKPKPGLTRIRRNLYRRGILSRS
+ "
+ misc_feature complement(2806034..2807017)
+ /locus_tag="SARI_02884"
+ /note="DNA-binding transcriptional regulator FruR;
+ Provisional; Region: PRK11303"
+ /db_xref="CDD:236897"
+ misc_feature complement(2806844..2807005)
+ /locus_tag="SARI_02884"
+ /note="Helix-turn-helix (HTH) DNA binding domain of the
+ LacI family of transcriptional regulators; Region:
+ HTH_LacI; cd01392"
+ /db_xref="CDD:143331"
+ misc_feature complement(order(2806847..2806852,2806856..2806861,
+ 2806868..2806870,2806877..2806879,2806916..2806918,
+ 2806925..2806930,2806952..2806954,2806961..2806966,
+ 2806970..2806984))
+ /locus_tag="SARI_02884"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:143331"
+ misc_feature complement(2806850..2806879)
+ /locus_tag="SARI_02884"
+ /note="domain linker motif; other site"
+ /db_xref="CDD:143331"
+ misc_feature complement(2806040..2806831)
+ /locus_tag="SARI_02884"
+ /note="Ligand binding domain of DNA transcription
+ repressor specific for fructose (FruR) and its close
+ homologs; Region: PBP1_FruR; cd06274"
+ /db_xref="CDD:107269"
+ misc_feature complement(order(2806169..2806171,2806175..2806177,
+ 2806265..2806267,2806670..2806672,2806724..2806726,
+ 2806730..2806732,2806739..2806741,2806754..2806756,
+ 2806763..2806768,2806772..2806777,2806805..2806807))
+ /locus_tag="SARI_02884"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:107269"
+ misc_feature complement(order(2806196..2806198,2806280..2806282,
+ 2806427..2806429,2806535..2806546,2806577..2806582,
+ 2806781..2806783,2806793..2806795))
+ /locus_tag="SARI_02884"
+ /note="ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:107269"
+ gene 2807096..2807227
+ /locus_tag="SARI_02885"
+ CDS 2807096..2807227
+ /locus_tag="SARI_02885"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571874.1"
+ /db_xref="GI:161504762"
+ /translation="MITPATAFIPGYHGFRKKKSPTGDVGLGMIILVGRQSANQVSA"
+ gene complement(2807217..2807711)
+ /gene="ilvH"
+ /locus_tag="SARI_02886"
+ CDS complement(2807217..2807711)
+ /gene="ilvH"
+ /locus_tag="SARI_02886"
+ /inference="protein motif:BlastProDom:IPR004789"
+ /inference="protein motif:HMMPfam:IPR002912"
+ /inference="protein motif:HMMTigr:IPR004789"
+ /inference="similar to AA sequence:INSD:AAV76152.1"
+ /note="'with IlvI catalyzes the formation of
+ 2-acetolactate from pyruvate, the small subunit is
+ required for full activity and valine sensitivity; E.coli
+ produces 3 isoenzymes of acetolactate synthase which
+ differ in specificity to substrates, valine sensitivity
+ and affinity for cofactors; also known as acetolactate
+ synthase 3 small subunit'"
+ /codon_start=1
+ /transl_table=11
+ /product="acetolactate synthase 3 regulatory subunit"
+ /protein_id="YP_001571875.1"
+ /db_xref="GI:161504763"
+ /db_xref="InterPro:IPR002912"
+ /db_xref="InterPro:IPR004789"
+ /translation="MMRRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTL
+ SRMTIQTVGDEKVLEQIEKQLHKLVDVLRVSELGQGAHVEREVMLVKIQASGYGREEV
+ KRNTEIFRGQIIDVTPTLYTVQLAGTSDKLDAFLASLREVAKIVEVARSGVVGLSRGD
+ KIMR"
+ misc_feature complement(2807223..2807708)
+ /gene="ilvH"
+ /locus_tag="SARI_02886"
+ /note="acetolactate synthase 3 regulatory subunit;
+ Reviewed; Region: ilvH; PRK11895"
+ /db_xref="CDD:183365"
+ misc_feature complement(2807487..2807702)
+ /gene="ilvH"
+ /locus_tag="SARI_02886"
+ /note="N-terminal ACT domain of the Escherichia coli
+ IlvH-like regulatory subunit of acetohydroxyacid synthase
+ (AHAS); Region: ACT_AHAS; cd04878"
+ /db_xref="CDD:153150"
+ misc_feature complement(order(2807577..2807579,2807604..2807606,
+ 2807619..2807624,2807661..2807663,2807676..2807678,
+ 2807682..2807684))
+ /gene="ilvH"
+ /locus_tag="SARI_02886"
+ /note="putative valine binding site [chemical binding];
+ other site"
+ /db_xref="CDD:153150"
+ misc_feature complement(order(2807574..2807576,2807604..2807618,
+ 2807628..2807630,2807637..2807639,2807658..2807660,
+ 2807667..2807672))
+ /gene="ilvH"
+ /locus_tag="SARI_02886"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:153150"
+ misc_feature complement(2807235..2807462)
+ /gene="ilvH"
+ /locus_tag="SARI_02886"
+ /note="Small subunit of acetolactate synthase; Region:
+ ALS_ss_C; pfam10369"
+ /db_xref="CDD:204463"
+ gene complement(2807711..2809429)
+ /locus_tag="SARI_02887"
+ CDS complement(2807711..2809429)
+ /locus_tag="SARI_02887"
+ /inference="protein motif:HMMPfam:IPR011766"
+ /inference="protein motif:HMMPfam:IPR012000"
+ /inference="protein motif:HMMPfam:IPR012001"
+ /inference="protein motif:HMMPIR:IPR000399"
+ /inference="protein motif:HMMPIR:IPR004407"
+ /inference="protein motif:HMMTigr:IPR012846"
+ /inference="protein motif:ScanRegExp:IPR000399"
+ /note="'catalyzes the formation of 2-acetolactate from
+ pyruvate, leucine sensitive'"
+ /codon_start=1
+ /transl_table=11
+ /product="acetolactate synthase 3 catalytic subunit"
+ /protein_id="YP_001571876.1"
+ /db_xref="GI:161504764"
+ /db_xref="InterPro:IPR000399"
+ /db_xref="InterPro:IPR004407"
+ /db_xref="InterPro:IPR011766"
+ /db_xref="InterPro:IPR012000"
+ /db_xref="InterPro:IPR012001"
+ /db_xref="InterPro:IPR012846"
+ /translation="MLSGAEMVVRSLIDQGVKQVFGYPGGAVLDIYDALHTVGGIDHV
+ LVRHEQAAVHMADGLARATGDIGVVLVTSGPGATNAITGIATAYMDSIPLVILSGQVA
+ TSLIGYDAFQECDMVGISRPVVKHSFLVKHTEDIPQVLKKAFWLAASGRPGPVVVDLP
+ KDILNPAKKMPYAWPETVSMRSYNPTTSGHKGQIKRALQTLASAKQPVVYVGGGAISA
+ ACYAPLRQIIETFNLPVVSSLMGIGAFPATHRQSLGMLGMHGTYEANMTIHNADVIFA
+ VGVRFDDRATNNLAKYCPNATVLHIDIDPTSISKTVNADIPVVGDARVVLEQMLELLA
+ QDTPSQPRDDIRDWWQQIERWRARQCLKYDAESESIKPQAVIETLWRLTKGDAYVTSD
+ VGQHQMFAALYYPFDKPRRWINSGGLGTMGFGLPAALGVKMALPKEMVVCVTGDGSIQ
+ MNIQELSTALQYELPVLVLNLNNRYLGMVKQWQDMIYSGRHSQSYMQSLPDFVRLAEA
+ YGHVGLQINRPDELESKLSEALEHVRNNRLVFVDVTVDGSEHVYPMQIRGGGMDEMWL
+ SKTERT"
+ misc_feature complement(2807714..2809429)
+ /locus_tag="SARI_02887"
+ /note="acetolactate synthase 3 catalytic subunit;
+ Validated; Region: PRK07979"
+ /db_xref="CDD:181185"
+ misc_feature complement(2808947..2809414)
+ /locus_tag="SARI_02887"
+ /note="Pyrimidine (PYR) binding domain of POX and related
+ proteins; Region: TPP_PYR_POX_like; cd07035"
+ /db_xref="CDD:132918"
+ misc_feature complement(order(2809160..2809165,2809172..2809174,
+ 2809184..2809186,2809205..2809207,2809241..2809249,
+ 2809253..2809258,2809265..2809270,2809277..2809279,
+ 2809286..2809306,2809331..2809333,2809343..2809345,
+ 2809355..2809360,2809373..2809375))
+ /locus_tag="SARI_02887"
+ /note="PYR/PP interface [polypeptide binding]; other site"
+ /db_xref="CDD:132918"
+ misc_feature complement(order(2809064..2809066,2809073..2809075,
+ 2809175..2809177,2809184..2809189,2809193..2809198,
+ 2809205..2809207,2809280..2809282,2809286..2809297,
+ 2809301..2809303,2809331..2809333,2809343..2809345,
+ 2809352..2809360))
+ /locus_tag="SARI_02887"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:132918"
+ misc_feature complement(order(2809193..2809195,2809205..2809207,
+ 2809283..2809285,2809358..2809360))
+ /locus_tag="SARI_02887"
+ /note="TPP binding site [chemical binding]; other site"
+ /db_xref="CDD:132918"
+ misc_feature complement(2808443..2808850)
+ /locus_tag="SARI_02887"
+ /note="Thiamine pyrophosphate enzyme, central domain;
+ Region: TPP_enzyme_M; pfam00205"
+ /db_xref="CDD:215786"
+ misc_feature complement(2807768..2808322)
+ /locus_tag="SARI_02887"
+ /note="Thiamine pyrophosphate (TPP) family,
+ Acetohydroxyacid synthase (AHAS) subfamily, TPP-binding
+ module; composed of proteins similar to the large
+ catalytic subunit of AHAS. AHAS catalyzes the condensation
+ of two molecules of pyruvate to give the...; Region:
+ TPP_AHAS; cd02015"
+ /db_xref="CDD:238973"
+ misc_feature complement(order(2808011..2808013,2808077..2808079,
+ 2808086..2808094,2808167..2808169,2808173..2808175,
+ 2808242..2808253))
+ /locus_tag="SARI_02887"
+ /note="TPP-binding site [chemical binding]; other site"
+ /db_xref="CDD:238973"
+ misc_feature complement(order(2807906..2807908,2807915..2807917,
+ 2807927..2807932,2808047..2808049,2808068..2808073,
+ 2808077..2808082,2808167..2808169,2808173..2808175,
+ 2808182..2808184))
+ /locus_tag="SARI_02887"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238973"
+ gene complement(2809755..2810699)
+ /gene="leuO"
+ /locus_tag="SARI_02888"
+ CDS complement(2809755..2810699)
+ /gene="leuO"
+ /locus_tag="SARI_02888"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="protein motif:HMMPfam:IPR005119"
+ /inference="similar to AA sequence:INSD:AAD26693.1"
+ /note="activator for leuABCD operon; member of LysR family
+ of transcriptional activators"
+ /codon_start=1
+ /transl_table=11
+ /product="leucine transcriptional activator"
+ /protein_id="YP_001571877.2"
+ /db_xref="GI:448236269"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR005119"
+ /db_xref="InterPro:IPR011991"
+ /translation="MPEVKTEKPHLLEMGKPQLRMVDLNLLTVFDAVMQEQNITRAAH
+ TLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQPTARAFQLFGSVRQALQLVQNELPG
+ SGFEPISSERVFNLCVCSPLDNILTSLIYNRVEQIAPNIHLVFKASLNQNTEHQLRYQ
+ ETEFVISYEEFRRPEFTSVPLFKDEMVLVASRKHPRISGPLLESDVYNEQHAVVSLER
+ YASFSQPWYDTPDKQSSVAYQGMALISVLNVVSQTHLVAIAPRWLAEEFAESLDLQIL
+ PLPLKLNSRTCYLTWHEAAGRDKGHQWMEELLVSVCKR"
+ misc_feature complement(2809758..2810699)
+ /gene="leuO"
+ /locus_tag="SARI_02888"
+ /note="leucine transcriptional activator; Reviewed;
+ Region: leuO; PRK09508"
+ /db_xref="CDD:181918"
+ misc_feature complement(2810454..2810630)
+ /gene="leuO"
+ /locus_tag="SARI_02888"
+ /note="Bacterial regulatory helix-turn-helix protein, lysR
+ family; Region: HTH_1; pfam00126"
+ /db_xref="CDD:215735"
+ misc_feature complement(2809767..2810363)
+ /gene="leuO"
+ /locus_tag="SARI_02888"
+ /note="The C-terminal substrate binding domain of
+ LysR-type transcriptional regulator LeuO, an activator of
+ leucine synthesis operon, contains the type 2 periplasmic
+ binding fold; Region: PBP2_LeuO; cd08466"
+ /db_xref="CDD:176155"
+ misc_feature complement(order(2809839..2809841,2810040..2810042,
+ 2810148..2810150,2810322..2810324,2810334..2810339,
+ 2810343..2810345))
+ /gene="leuO"
+ /locus_tag="SARI_02888"
+ /note="putative substrate binding pocket [chemical
+ binding]; other site"
+ /db_xref="CDD:176155"
+ misc_feature complement(order(2809902..2809904,2809944..2809946,
+ 2809953..2809958,2809965..2809970,2809977..2809991,
+ 2810070..2810072,2810259..2810261,2810265..2810279,
+ 2810283..2810288,2810295..2810300,2810304..2810309,
+ 2810316..2810321,2810328..2810333,2810340..2810342))
+ /gene="leuO"
+ /locus_tag="SARI_02888"
+ /note="putative dimerization interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:176155"
+ misc_feature 2811331..2811479
+ /inference="nucleotide motif:Rfam:RF00512"
+ /note="leucine operon leader"
+ gene 2811520..2813091
+ /locus_tag="SARI_02889"
+ CDS 2811520..2813091
+ /locus_tag="SARI_02889"
+ /inference="protein motif:HMMPfam:IPR000891"
+ /inference="protein motif:HMMPfam:IPR013709"
+ /inference="protein motif:HMMTigr:IPR005671"
+ /inference="protein motif:ScanRegExp:IPR002034"
+ /inference="similar to AA sequence:INSD:AAL19077.1"
+ /note="catalyzes the formation of 2-isopropylmalate from
+ acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="2-isopropylmalate synthase"
+ /protein_id="YP_001571878.1"
+ /db_xref="GI:161504766"
+ /db_xref="InterPro:IPR000891"
+ /db_xref="InterPro:IPR002034"
+ /db_xref="InterPro:IPR005671"
+ /db_xref="InterPro:IPR013709"
+ /translation="MSQQVIIFDTTLRDGEQALQASLSAKEKLQIALALERMGVDVME
+ VGFPVSSPGDFESVQTIARIIKNSRVCALARCVEKDIDVAAQALKVADAFRIHTFIAT
+ SPMHIATKLRSTLDEVIERAVYMVKRARNYTDDVEFSCEDAGRTPVNDLARVVEAAIN
+ AGARTINIPDTVGYTMPFEFARIISGLYERVPNIDNAIISVHTHDDLGLAVGNSLAAV
+ HAGARQVEGAMNGIGERAGNCALEEVIMAIKVRKDIMNVHTNINHHEIWRTSQTVSQI
+ CNMPIPTNKAIVGSGAFAHSSGIHQDGVLKNRENYEIMTPESIGLNQVQLNLTSRSGR
+ AAVKHRMEEMGYQESDYNLDRLYDAFLKLADKKGQVFDYDLEALAFINKQQEEPEHFR
+ LDYFSVQSGSSDIATASVKLACGEETKAEAANGNGPVDAIYQAINRITGYDVELVKYD
+ LNAKGQGKDALGQVDIVVNHHGRRFHGVGLATDIVESSAKAMVHVLNNIWRAAEVEKE
+ LQRKAHNKENNKEIV"
+ misc_feature 2811520..2813055
+ /locus_tag="SARI_02889"
+ /note="2-isopropylmalate synthase; Validated; Region:
+ PRK00915"
+ /db_xref="CDD:234864"
+ misc_feature 2811538..2812344
+ /locus_tag="SARI_02889"
+ /note="2-isopropylmalate synthase (IPMS), N-terminal
+ catalytic TIM barrel domain; Region: DRE_TIM_IPMS;
+ cd07940"
+ /db_xref="CDD:163678"
+ misc_feature order(2811556..2811561,2811568..2811570,2811649..2811651,
+ 2811742..2811744,2811808..2811810,2811934..2811936,
+ 2811940..2811942,2812024..2812026,2812030..2812032,
+ 2812123..2812125,2812129..2812131)
+ /locus_tag="SARI_02889"
+ /note="active site"
+ /db_xref="CDD:163678"
+ misc_feature order(2811556..2811561,2811649..2811651)
+ /locus_tag="SARI_02889"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:163678"
+ misc_feature order(2812123..2812125,2812129..2812131)
+ /locus_tag="SARI_02889"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:163678"
+ misc_feature 2812624..2813019
+ /locus_tag="SARI_02889"
+ /note="LeuA allosteric (dimerisation) domain; Region:
+ LeuA_dimer; pfam08502"
+ /db_xref="CDD:219870"
+ gene 2813091..2814182
+ /locus_tag="SARI_02890"
+ CDS 2813091..2814182
+ /locus_tag="SARI_02890"
+ /inference="protein motif:Gene3D:IPR013814"
+ /inference="protein motif:HMMPanther:IPR001804"
+ /inference="protein motif:HMMPfam:IPR001804"
+ /inference="protein motif:HMMTigr:IPR004429"
+ /inference="protein motif:ScanRegExp:IPR001804"
+ /inference="similar to AA sequence:INSD:CAD01269.1"
+ /note="catalyzes the oxidation of 3-isopropylmalate to
+ 3-carboxy-4-methyl-2-oxopentanoate in leucine
+ biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="3-isopropylmalate dehydrogenase"
+ /protein_id="YP_001571879.1"
+ /db_xref="GI:161504767"
+ /db_xref="InterPro:IPR001804"
+ /db_xref="InterPro:IPR004429"
+ /db_xref="InterPro:IPR013814"
+ /translation="MSKNYHIAVLPGDGIGPEVMAQALKVMDAVRSRFDMRITTSRYD
+ VGGIAIDNHGHPLPKATVEGCEQADAVLFGSVGGPKWENLPPESQPERGALLPLRKHF
+ KLFSNLRPAKLYQGLEAFCPLRADIAANGFDILCVRELTGGIYFGQPKGREGSGQYEK
+ AFDTEVYHRFEIERIARIAFESARKRRRKVTSIDKANVLQSSILWREIVNDVAKAYPD
+ VELTHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQG
+ FGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDADEAATAIEQAINRALEEGI
+ ATYDLARGAAAVSTDEMGDIIARYVAEGV"
+ misc_feature 2813097..2814176
+ /locus_tag="SARI_02890"
+ /note="3-isopropylmalate dehydrogenase; Provisional;
+ Region: PRK00772"
+ /db_xref="CDD:234832"
+ misc_feature 2813097..2814158
+ /locus_tag="SARI_02890"
+ /note="tartrate dehydrogenase; Region: TTC; TIGR02089"
+ /db_xref="CDD:233718"
+ gene 2814185..2815585
+ /locus_tag="SARI_02891"
+ CDS 2814185..2815585
+ /locus_tag="SARI_02891"
+ /inference="protein motif:BlastProDom:IPR001030"
+ /inference="protein motif:HMMPfam:IPR001030"
+ /inference="protein motif:HMMPIR:IPR012095"
+ /inference="protein motif:HMMTigr:IPR004430"
+ /inference="protein motif:ScanRegExp:IPR001030"
+ /inference="protein motif:superfamily:IPR001030"
+ /inference="similar to AA sequence:INSD:AAX64013.1"
+ /note="'dehydratase component, catalyzes the isomerization
+ between 2-isopropylmalate and 3-isopropylmalate'"
+ /codon_start=1
+ /transl_table=11
+ /product="isopropylmalate isomerase large subunit"
+ /protein_id="YP_001571880.1"
+ /db_xref="GI:161504768"
+ /db_xref="InterPro:IPR001030"
+ /db_xref="InterPro:IPR004430"
+ /db_xref="InterPro:IPR012095"
+ /translation="MAKTLYEKLFDAHVVFEAPNETPLLYIDRHLVHEVTSPQAFDGL
+ RAHHRPVRQPGKTFATMDHNVSTQTKDINASGEMARIQMQELIKNCNEFGVELYDLNH
+ PYQGIVHVMGPEQGVTLPGMTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLKQ
+ GRAKTMKIEVTGNAAPGITAKDIVLAIIGKTGSAGGTGHVVEFCGDAIRALSMEGRMT
+ LCNMAIEMGAKAGLVAPDETTFNYVKGRLHAPKGSDFDDAVEYWKTLKTDDGATFDTV
+ VTLRAEEIAPQVTWGTNPGQVISVTDIIPDPASFSDPVERASAEKALAYMGLQPGVPL
+ TDVAIDKVFIGSCTNSRIEDLRAAAEVAKGRKVAPGVQALVVPGSGPVKAQAEAEGLD
+ KIFIEAGFEWRLPGCSMCLAMNNDRLNPGERCASTSNRNFEGRQGRGGRTHLVSPAMA
+ AAAAVTGRFADIRSIK"
+ misc_feature 2814185..2815579
+ /locus_tag="SARI_02891"
+ /note="3-isopropylmalate dehydratase large subunit;
+ Reviewed; Region: PRK00402"
+ /db_xref="CDD:234748"
+ misc_feature 2814269..2815561
+ /locus_tag="SARI_02891"
+ /note="3-isopropylmalate dehydratase catalyzes the
+ isomerization between 2-isopropylmalate and
+ 3-isopropylmalate; Region: IPMI; cd01583"
+ /db_xref="CDD:153133"
+ misc_feature order(2814281..2814283,2814290..2814292,2814566..2814571,
+ 2815415..2815417,2815472..2815474,2815487..2815489)
+ /locus_tag="SARI_02891"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:153133"
+ misc_feature order(2814572..2814574,2815223..2815225,2815403..2815405,
+ 2815412..2815417,2815469..2815471)
+ /locus_tag="SARI_02891"
+ /note="ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:153133"
+ gene 2815596..2816201
+ /gene="leuD"
+ /locus_tag="SARI_02892"
+ CDS 2815596..2816201
+ /gene="leuD"
+ /locus_tag="SARI_02892"
+ /inference="protein motif:HMMPfam:IPR000573"
+ /inference="protein motif:HMMPIR:IPR012305"
+ /inference="protein motif:HMMTigr:IPR004431"
+ /inference="similar to AA sequence:INSD:AAV76145.1"
+ /note="catalyzes the isomerization between
+ 2-isopropylmalate and 3-isopropylmalate in leucine
+ biosynthesis; forms a heterodimer of LeuC/D"
+ /codon_start=1
+ /transl_table=11
+ /product="isopropylmalate isomerase small subunit"
+ /protein_id="YP_001571881.1"
+ /db_xref="GI:161504769"
+ /db_xref="InterPro:IPR000573"
+ /db_xref="InterPro:IPR004431"
+ /db_xref="InterPro:IPR012305"
+ /translation="MAEKFIQHTGLVVPLDAANVDTDAIIPKQFLQKVTRTGFGAHLF
+ NDWRFLDEQGQQPNPAFVLNFPEYQGASILLARENFGCGSSREHAPWALTDYGFKVVI
+ APSFADIFYGNSFNNQLLPVKLSEEAVDELFALAQANPGIHFEVDLAAQVVKAGDKRY
+ PFEIDAFRRHCMMNGLDSIGLTLQHEDAIAAYENKQPAFMR"
+ misc_feature 2815602..2816198
+ /gene="leuD"
+ /locus_tag="SARI_02892"
+ /note="isopropylmalate isomerase small subunit;
+ Provisional; Region: leuD; PRK01641"
+ /db_xref="CDD:179314"
+ misc_feature 2815638..2816039
+ /gene="leuD"
+ /locus_tag="SARI_02892"
+ /note="Aconatase-like swivel domain of 3-isopropylmalate
+ dehydratase and related uncharacterized proteins.
+ 3-isopropylmalate dehydratase catalyzes the isomerization
+ between 2-isopropylmalate and 3-isopropylmalate, via the
+ formation of 2-isopropylmaleate...; Region: IPMI_Swivel;
+ cd01577"
+ /db_xref="CDD:238809"
+ misc_feature 2815845..2815853
+ /gene="leuD"
+ /locus_tag="SARI_02892"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:238809"
+ gene complement(2816339..2817517)
+ /locus_tag="SARI_02893"
+ CDS complement(2816339..2817517)
+ /locus_tag="SARI_02893"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="protein motif:HMMTigr:IPR004750"
+ /inference="similar to AA sequence:REFSEQ:AP_000734.1"
+ /note="'COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571882.1"
+ /db_xref="GI:161504770"
+ /db_xref="InterPro:IPR004750"
+ /db_xref="InterPro:IPR011701"
+ /translation="MLWIMTMGRRLNGIYAAFMLVAFMMGVAGALQAPTLSLFLSREV
+ GAQPFWVGLFYTVNAIAGIGVSLALAKRSDSRGDRRKLIMFCCLMAIGNALLFAFNRH
+ YVTLITCGVLLASLANTAMPQLFALAREYADSSAREVVMFSSVMRAQLSLAWVIGPPL
+ AFMLALNYGFTAMFSIAAVIFAVSLVLIALMLPSVARVEQPVDAPIAQGNGWQDKNVR
+ MLFIASTLMWTCNTMYLIDMPLWISAELGLSDKLAGVLMGTAAGLEIPAMILAGFYVK
+ RFGKRRMMIAAVAAGVLFYIGLIFFHSRTALLLLQLFNAVFIGIVAGIGMLWFQDLMP
+ GRAGAATTLFTNSISTGVILAGMIQGAVAQSFGHFAVYWVIAAISVVTLAMTGRVKDV
+ "
+ misc_feature complement(2816348..2817472)
+ /locus_tag="SARI_02893"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature complement(2816345..2817469)
+ /locus_tag="SARI_02893"
+ /note="sugar efflux transporter; Region: 2A0120;
+ TIGR00899"
+ /db_xref="CDD:129977"
+ misc_feature complement(order(2816462..2816464,2816471..2816476,
+ 2816483..2816488,2816495..2816500,2816528..2816530,
+ 2816537..2816542,2816552..2816554,2816561..2816566,
+ 2816573..2816575,2816714..2816716,2816726..2816728,
+ 2816735..2816737,2816747..2816749,2816759..2816761,
+ 2816801..2816803,2816810..2816815,2816822..2816827,
+ 2816834..2816836,2817056..2817058,2817074..2817079,
+ 2817086..2817088,2817095..2817097,2817131..2817133,
+ 2817140..2817145,2817152..2817157,2817164..2817169,
+ 2817308..2817313,2817317..2817322,2817332..2817334,
+ 2817341..2817346,2817353..2817355,2817407..2817412,
+ 2817416..2817424,2817431..2817433))
+ /locus_tag="SARI_02893"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene complement(2817547..2817631)
+ /locus_tag="SARI_02894"
+ misc_RNA complement(2817547..2817631)
+ /locus_tag="SARI_02894"
+ /product="SgrS RNA"
+ /inference="nucleotide motif:Rfam:RF00534"
+ /note="Rfam score 74.83"
+ gene complement(2817636..2817782)
+ /locus_tag="SARI_02895"
+ CDS complement(2817636..2817782)
+ /locus_tag="SARI_02895"
+ /inference="similar to AA sequence:REFSEQ:YP_215091.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571883.1"
+ /db_xref="GI:161504771"
+ /translation="MKQEEEVAMRQFWLRYFAATEKRSWLACLSAPQRLKMLTELMQW
+ EATD"
+ gene 2817851..2819509
+ /locus_tag="SARI_02896"
+ CDS 2817851..2819509
+ /locus_tag="SARI_02896"
+ /inference="protein motif:HMMPfam:IPR000914"
+ /note="activates sgrS under glucose-phosphate stress
+ conditions"
+ /codon_start=1
+ /transl_table=11
+ /product="transcriptional regulator SgrR"
+ /protein_id="YP_001571884.1"
+ /db_xref="GI:161504772"
+ /db_xref="InterPro:IPR000914"
+ /translation="MPSGRLQQQFIRLWQCCDGKTQDTTLNELADLLNCSRRHMRTLL
+ NTMQARGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKSA
+ VRQMLISHLGRSFRQGRHILRVLYYRPMHNLLPGTALRRSETHIARQIFSSLTRVNEE
+ NGELEADIAHHWQQISPLLWRFYLRPGIHFHHGRELEMEDVIASLTRINTLPLYSHIT
+ KIDSPTAWTLDIHLSQPDRWLPWLLGQVPAMILPREWETLTNFASHPIGTGPYAVRRN
+ TRNQLKILAFDDYFGYRALIDEVNVWVLPDISEEPACGLMLEGPIQGGEKAIESRLEE
+ GCYYLLFDARTPRGAHPQVREWVSHVLSPTNLLYHADEPLQQLWFPAYGLLPRWHHAR
+ PGLDEKPAGLETLTLTFYREHIEHRVIARIMSALLAEHQVHLHIQEIDYDQWHAGEIE
+ SDIWLNSANFTLPLDFSLFAHLCEIPLLQNCIPSDWQGDAAQWRAGEMNLANWCQQLL
+ ASKAIVPLIHHWLIIHGQRSMRGLRMNTLGWFDFKSAWFAPPDP"
+ misc_feature 2817851..2819506
+ /locus_tag="SARI_02896"
+ /note="transcriptional regulator SgrR; Provisional;
+ Region: PRK13626"
+ /db_xref="CDD:184188"
+ misc_feature 2817863..2818204
+ /locus_tag="SARI_02896"
+ /note="Sugar transport-related sRNA regulator N-term;
+ Region: SgrR_N; pfam12793"
+ /db_xref="CDD:193269"
+ misc_feature 2818196..2819494
+ /locus_tag="SARI_02896"
+ /note="The C-terminal solute-binding domain of DNA-binding
+ transcriptional regulator SgrR is related to the ABC-type
+ oligopeptide-binding proteins and contains the type 2
+ periplasmic-binding fold; Region: PBP2_SgrR_like; cd08507"
+ /db_xref="CDD:173872"
+ misc_feature 2819543..2819642
+ /inference="nucleotide motif:Rfam:RF00059"
+ /note="TPP riboswitch (THI element)"
+ gene 2819674..2820657
+ /gene="tbpA"
+ /locus_tag="SARI_02897"
+ CDS 2819674..2820657
+ /gene="tbpA"
+ /locus_tag="SARI_02897"
+ /inference="protein motif:BlastProDom:IPR011587"
+ /inference="protein motif:HMMTigr:IPR005948"
+ /inference="protein motif:HMMTigr:IPR005967"
+ /inference="protein motif:ScanRegExp:IPR006061"
+ /inference="similar to AA sequence:INSD:"
+ /note="part of the thiamine and TPP transport system
+ tbpA-thiPQ"
+ /codon_start=1
+ /transl_table=11
+ /product="thiamine transporter substrate binding subunit"
+ /protein_id="YP_001571885.1"
+ /db_xref="GI:161504773"
+ /db_xref="InterPro:IPR005948"
+ /db_xref="InterPro:IPR005967"
+ /db_xref="InterPro:IPR006061"
+ /db_xref="InterPro:IPR011587"
+ /translation="MLKKYLPLLLLCAVPAFAKPVLTVYTYDSFAADWGPGPVVKKAF
+ EADCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLEAATQTTLFAKSGVA
+ NEAIKVPGGWKNDTFVPFDYGYFAFVYDKNKLKNPPKSLKELVESDQKWRVIYQDPRT
+ STPGLGLLLWMQKVYGDNAPQAWQKLAAKTVTVTKGWSEAYGLFLKGESDLVLSYTTS
+ PAYHIIEEKKDNYAAANFSEGHYLQVEVAARTVASKQPELAEKFLKFMVSPAFQNAIP
+ TGNWMYPVTQVALPSGFEQLSKPATALEFTPQQVAAQRQTWISEWQRAVSR"
+ misc_feature 2819707..2820654
+ /gene="tbpA"
+ /locus_tag="SARI_02897"
+ /note="ABC-type thiamine transport system, periplasmic
+ component [Coenzyme metabolism]; Region: TbpA; COG4143"
+ /db_xref="CDD:226624"
+ misc_feature 2819707..2820654
+ /gene="tbpA"
+ /locus_tag="SARI_02897"
+ /note="thiamine transporter substrate binding subunit;
+ Provisional; Region: tbpA; PRK11205"
+ /db_xref="CDD:236883"
+ gene 2820633..2822243
+ /gene="thiP"
+ /locus_tag="SARI_02898"
+ CDS 2820633..2822243
+ /gene="thiP"
+ /locus_tag="SARI_02898"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="protein motif:HMMTigr:IPR005947"
+ /inference="similar to AA sequence:REFSEQ:NP_459112.1"
+ /note="permease; with TbpA and ThiQ functions in transport
+ of thiamine and thiamine pyrophosphate into the cell;
+ repressed in presence of exogenous thiamine"
+ /codon_start=1
+ /transl_table=11
+ /product="thiamine transporter membrane protein"
+ /protein_id="YP_001571886.1"
+ /db_xref="GI:161504774"
+ /db_xref="InterPro:IPR000515"
+ /db_xref="InterPro:IPR005947"
+ /translation="MATRRQPLIPGWLLPGLTAATLMVAVALAAFLAIWLNAPSGAWS
+ TIWRDSYLWHVVRFSFWQAFLSAVLSVVPAIFLARALYRRRFPGRLALLRLCAMTLIL
+ PVLVAVFGILSVYGRQGWLASLWQMLGLKWTFSPYGLQGILLAHVFFNLPMASRLLLQ
+ SLENIPGEQRQLAAQLGIRGWHFFRFVEWPWLRRQIPPVAALIFMLCFASFATVLSLG
+ GGPQATTIELAIYQALSYDYDPARAAMLALIQMVCCLALVLLSQRLSKAIAPGMTLTQ
+ GWHDPDDRLHSRLTDALLIVLALLLLLPPLVAVVVDGVNRSLPEVLAQPILWQAVWTS
+ LRIALAAGVLCVVLTMMLLWSSRELRQRQQVFAGQTLELSGMLILAMPGIVLATGFFL
+ LLNNSVGLPESADGIVIFTNALMAIPYALKVLENPMRDITARYGMLCQSLGIEGGARL
+ KVVELRALKRPLAQAMAFACVLSIGDFGVVALFGNDNFRTLPFYLYQQIGSYRSEDGA
+ VTALILLLLCFTLFTLIEKLPGRNVKID"
+ misc_feature 2820663..2822234
+ /gene="thiP"
+ /locus_tag="SARI_02898"
+ /note="thiamine transporter membrane protein; Reviewed;
+ Region: thiP; PRK09433"
+ /db_xref="CDD:181853"
+ misc_feature 2820801..2821397
+ /gene="thiP"
+ /locus_tag="SARI_02898"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature order(2820846..2820851,2820858..2820863,2820876..2820878,
+ 2820906..2820917,2820921..2820950,2820957..2820962,
+ 2820966..2820968,2821071..2821076,2821083..2821085,
+ 2821089..2821091,2821098..2821103,2821107..2821109,
+ 2821119..2821124,2821131..2821133,2821182..2821184,
+ 2821224..2821229,2821236..2821238,2821257..2821268,
+ 2821275..2821280,2821314..2821319,2821347..2821352,
+ 2821359..2821364,2821368..2821373,2821380..2821385,
+ 2821392..2821397)
+ /gene="thiP"
+ /locus_tag="SARI_02898"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(2820924..2820968,2821257..2821274)
+ /gene="thiP"
+ /locus_tag="SARI_02898"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(2820966..2820968,2821056..2821058,2821275..2821277,
+ 2821308..2821310,2821317..2821319,2821347..2821349)
+ /gene="thiP"
+ /locus_tag="SARI_02898"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(2821134..2821172,2821188..2821193,2821203..2821205)
+ /gene="thiP"
+ /locus_tag="SARI_02898"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ misc_feature 2821626..2822165
+ /gene="thiP"
+ /locus_tag="SARI_02898"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature order(2821671..2821676,2821683..2821688,2821701..2821703,
+ 2821743..2821754,2821758..2821787,2821794..2821799,
+ 2821803..2821805,2821872..2821877,2821881..2821883,
+ 2821887..2821889,2821896..2821901,2821905..2821907,
+ 2821917..2821922,2821929..2821931,2821980..2821982,
+ 2822022..2822027,2822034..2822036,2822055..2822066,
+ 2822073..2822078,2822115..2822120,2822148..2822153,
+ 2822160..2822165)
+ /gene="thiP"
+ /locus_tag="SARI_02898"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(2821761..2821805,2822055..2822072)
+ /gene="thiP"
+ /locus_tag="SARI_02898"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(2821803..2821805,2821857..2821859,2822073..2822075,
+ 2822109..2822111,2822118..2822120,2822148..2822150)
+ /gene="thiP"
+ /locus_tag="SARI_02898"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(2821932..2821970,2821986..2821991,2822001..2822003)
+ /gene="thiP"
+ /locus_tag="SARI_02898"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene 2822272..2822928
+ /gene="thiQ"
+ /locus_tag="SARI_02899"
+ CDS 2822272..2822928
+ /gene="thiQ"
+ /locus_tag="SARI_02899"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR005968"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:INSD:CAD01263.1"
+ /note="with TbpA and ThiP is part of the thiamine and TPP
+ transport system"
+ /codon_start=1
+ /transl_table=11
+ /product="thiamine transporter ATP-binding subunit"
+ /protein_id="YP_001571887.1"
+ /db_xref="GI:161504775"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR005968"
+ /translation="MRFTLSIARGEQVAVLGPSGAGKSTLLNLIAGFLTPASGTMMIA
+ GEDHTATPPSRRPVSMLFQENNLFSHLSVQQNIGLGLNPGLKLNASQREKMRHIAEQM
+ GIDSLLERLPGELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVAEV
+ CRDKQLTLLMVSHSVEDAARIAPRSIVVADGRIAWQGKTDELLSGQASASALLGIKSE
+ "
+ misc_feature 2822272..2822868
+ /gene="thiQ"
+ /locus_tag="SARI_02899"
+ /note="thiamine ABC transporter, ATP-binding protein;
+ Region: thiQ; TIGR01277"
+ /db_xref="CDD:130344"
+ misc_feature 2822272..2822862
+ /gene="thiQ"
+ /locus_tag="SARI_02899"
+ /note="ATP-binding cassette domain of the thiamine
+ transport system; Region: ABC_ThiQ_thiamine_transporter;
+ cd03298"
+ /db_xref="CDD:213265"
+ misc_feature 2822320..2822343
+ /gene="thiQ"
+ /locus_tag="SARI_02899"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213265"
+ misc_feature order(2822329..2822334,2822338..2822346,2822458..2822460,
+ 2822686..2822691,2822788..2822790)
+ /gene="thiQ"
+ /locus_tag="SARI_02899"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213265"
+ misc_feature 2822449..2822460
+ /gene="thiQ"
+ /locus_tag="SARI_02899"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213265"
+ misc_feature 2822614..2822643
+ /gene="thiQ"
+ /locus_tag="SARI_02899"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213265"
+ misc_feature 2822674..2822691
+ /gene="thiQ"
+ /locus_tag="SARI_02899"
+ /note="Walker B; other site"
+ /db_xref="CDD:213265"
+ misc_feature 2822698..2822709
+ /gene="thiQ"
+ /locus_tag="SARI_02899"
+ /note="D-loop; other site"
+ /db_xref="CDD:213265"
+ misc_feature 2822776..2822796
+ /gene="thiQ"
+ /locus_tag="SARI_02899"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213265"
+ gene complement(2822978..2823745)
+ /locus_tag="SARI_02900"
+ CDS complement(2822978..2823745)
+ /locus_tag="SARI_02900"
+ /inference="similar to AA sequence:REFSEQ:NP_454717.1"
+ /note="'KEGG: lsl:LSL_1322 0.0029 alkaline phosphatase
+ K01077;
+ COG: COG0586 Uncharacterized membrane-associated protein;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571888.1"
+ /db_xref="GI:161504776"
+ /translation="MQALLEHFITQSALYSLIAVLLVAFLESLALVGLVLPGTVMMAG
+ LGALIGSGELNFWHAWLAGIIGCLLGDWISFWLGWRFKKPLHRWSFMKKNKALLDKTE
+ HALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVAKFIGPNLIGCLLWPPFYFLPGI
+ LAGAAIDIPADMQSGDFKWLLLATALLLWVGGWFCWRLWRSGKAAVDRLTAYLPRSRL
+ LYLAPLTLGIGVVALVALLRHPLMPVYMDILRKVVGY"
+ misc_feature complement(2823131..2823724)
+ /locus_tag="SARI_02900"
+ /note="Uncharacterized membrane-associated protein
+ [Function unknown]; Region: DedA; COG0586"
+ /db_xref="CDD:223659"
+ misc_feature complement(2823263..2823640)
+ /locus_tag="SARI_02900"
+ /note="SNARE associated Golgi protein; Region:
+ SNARE_assoc; pfam09335"
+ /db_xref="CDD:220186"
+ gene complement(2823864..2824709)
+ /locus_tag="SARI_02901"
+ CDS complement(2823864..2824709)
+ /locus_tag="SARI_02901"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR000005"
+ /inference="protein motif:HMMPfam:IPR003313"
+ /inference="protein motif:HMMSmart:IPR000005"
+ /inference="protein motif:ScanRegExp:IPR000005"
+ /inference="protein motif:superfamily:IPR003313"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:INSD:AAD22473.1"
+ /note="positive and negative regulator; regulates the
+ araBAD and araFGH operons and other genes involved in the
+ transport and catabolism of L-arabinose"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional regulator AraC"
+ /protein_id="YP_001571889.1"
+ /db_xref="GI:161504777"
+ /db_xref="InterPro:IPR000005"
+ /db_xref="InterPro:IPR003313"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /translation="MAETQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKG
+ YILNLTIRGEGIINNNGEQFVCRPGDILLFPPGEIHHYGRHPDASEWYHQWVYFRPRA
+ YWQEWLAWPTIFAQTGFFRPDEARQPHFSELFGQIISAGQGEGRYSELLAINLLEQLL
+ LRRMAVINESLHPPMDSRVRDACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQ
+ LGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEF
+ RAGCE"
+ misc_feature complement(2823867..2824709)
+ /locus_tag="SARI_02901"
+ /note="DNA-binding transcriptional regulator AraC;
+ Provisional; Region: PRK10572"
+ /db_xref="CDD:236717"
+ misc_feature complement(2824263..2824649)
+ /locus_tag="SARI_02901"
+ /note="AraC-like ligand binding domain; Region:
+ AraC_binding; pfam02311"
+ /db_xref="CDD:145456"
+ misc_feature complement(2824029..2824154)
+ /locus_tag="SARI_02901"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ misc_feature complement(2823879..2823989)
+ /locus_tag="SARI_02901"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ gene 2825049..2826758
+ /locus_tag="SARI_02902"
+ CDS 2825049..2826758
+ /locus_tag="SARI_02902"
+ /inference="protein motif:HMMPanther:IPR000577"
+ /inference="protein motif:HMMPfam:IPR000577"
+ /inference="protein motif:HMMTigr:IPR005929"
+ /inference="similar to AA sequence:INSD:AAV76138.1"
+ /note="catalyzes the phosphorylation of ribulose to
+ ribulose 5-phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="ribulokinase"
+ /protein_id="YP_001571890.1"
+ /db_xref="GI:161504778"
+ /db_xref="InterPro:IPR000577"
+ /db_xref="InterPro:IPR005929"
+ /translation="MAIAIGLDFGSDSVRALAVDCATGGEIATSVEWYPRWQEGRYCD
+ GPNNQFRHHPRDYMESMEIALKRVLAELSAAQRANVIGIGVDSTGSTPAPIDADGNVL
+ ALRPEFAENPNAMFVLWKDHTAVEEADEITRLCHMPGKVDYSRYIGGVYSSEWFWAKI
+ LHITREDSAVAQAAVSWVELCDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLP
+ PASFFDELDPCINRHLRYPLFSETFTADLPVGTLCAEWAQRLGLPESVVISGGAFDCH
+ MGAVGAGAQPNTLVKVIGTSTCDILIADKQSVGDRAVKGICGQVDGSVVPNFIGLEAG
+ QSAFGDIYAWFGRVLSWPLAQLAARHPELKDQINASQKQLLPALTDAWAKNPSLAHLP
+ VVLDWFNGRRTPNANQRLKGIITDLNLATDAPALFGGLIAATAFGARAIMECFTEQGI
+ PVNNVMALGGIARKNQVIMQVCCDVLNRPLQIVASDQCCALGAAIFAAVAAKVHADIP
+ AAQQNMASAVERTLHPRPEQAQRFEQLYRRYQQWALSAEQHYLTTATPALTTPVNQAI
+ LTH"
+ misc_feature 2825049..2826698
+ /locus_tag="SARI_02902"
+ /note="ribulokinase; Provisional; Region: PRK04123"
+ /db_xref="CDD:235221"
+ misc_feature 2825052..2826515
+ /locus_tag="SARI_02902"
+ /note="Ribulokinases; belongs to the FGGY family of
+ carbohydrate kinases; Region: FGGY_RBK; cd07781"
+ /db_xref="CDD:198358"
+ misc_feature order(2825058..2825060,2825064..2825066,2825070..2825072,
+ 2825091..2825093,2825097..2825099,2825103..2825105,
+ 2825118..2825123,2825133..2825135,2825289..2825306,
+ 2825481..2825492,2825496..2825498,2825511..2825513,
+ 2825649..2825654,2825661..2825666,2825676..2825684,
+ 2825778..2825792,2825847..2825849,2825853..2825855,
+ 2825877..2825879,2825883..2825891,2825979..2825981,
+ 2825985..2825987,2825994..2826020,2826024..2826026,
+ 2826036..2826044,2826252..2826254,2826264..2826266,
+ 2826507..2826509,2826513..2826515)
+ /locus_tag="SARI_02902"
+ /note="N- and C-terminal domain interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:198358"
+ misc_feature order(2825070..2825072,2825076..2825087,2825091..2825093,
+ 2825310..2825312,2825316..2825318,2825403..2825405,
+ 2825868..2825873,2825925..2825933,2825940..2825942,
+ 2826063..2826065,2826075..2826077,2826180..2826182,
+ 2826423..2826431,2826441..2826443,2826513..2826515)
+ /locus_tag="SARI_02902"
+ /note="active site"
+ /db_xref="CDD:198358"
+ misc_feature order(2825070..2825072,2825076..2825087,2825091..2825093,
+ 2825868..2825870,2825925..2825933,2826063..2826068,
+ 2826072..2826077,2826180..2826185,2826189..2826191,
+ 2826423..2826431,2826441..2826443)
+ /locus_tag="SARI_02902"
+ /note="MgATP binding site [chemical binding]; other site"
+ /db_xref="CDD:198358"
+ misc_feature order(2825070..2825072,2825079..2825081,2825868..2825870)
+ /locus_tag="SARI_02902"
+ /note="catalytic site [active]"
+ /db_xref="CDD:198358"
+ misc_feature order(2825070..2825072,2825868..2825870)
+ /locus_tag="SARI_02902"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:198358"
+ misc_feature order(2825076..2825081,2825310..2825318,2825403..2825405,
+ 2825508..2825510,2825667..2825669,2825868..2825873,
+ 2825931..2825933,2825940..2825942,2826042..2826044)
+ /locus_tag="SARI_02902"
+ /note="carbohydrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:198358"
+ misc_feature order(2826066..2826068,2826078..2826080,2826087..2826104,
+ 2826219..2826221,2826225..2826227,2826240..2826245,
+ 2826279..2826305,2826309..2826317)
+ /locus_tag="SARI_02902"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:198358"
+ gene 2826769..2828271
+ /locus_tag="SARI_02903"
+ CDS 2826769..2828271
+ /locus_tag="SARI_02903"
+ /inference="protein motif:BlastProDom:IPR003762"
+ /inference="protein motif:HMMPfam:IPR003762"
+ /inference="protein motif:HMMPIR:IPR003762"
+ /inference="similar to AA sequence:SwissProt:P06189"
+ /note="catalyzes the formation of L-ribulose from
+ L-arabinose in L-arabinose catabolism"
+ /codon_start=1
+ /transl_table=11
+ /product="L-arabinose isomerase"
+ /protein_id="YP_001571891.1"
+ /db_xref="GI:161504779"
+ /db_xref="InterPro:IPR003762"
+ /translation="MTIFDNYEVWFVIGSQHLYGPKTLRQVTQHAEHVVKALNTEAKL
+ PCKLVLKPLGTSPDEITAICRDANYDDRCAGLVVWLHTFSPAKMWINGLSILNKPLLQ
+ FHTQFNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDKEAHTRI
+ SAWMRQAVSKQDIRQLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVV
+ NSISDGDINALIDEYESSYTLTPATRIHGDKRQNVREAARIELGIKRFLEQGGFHAFT
+ TTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMED
+ YTYHFEKGNDLVLGSHMLEVCPSIAVEEKPLLDVQHLGIGGKEDPARLIFNTQTGSAI
+ VASLIDLGDRYRLLVNCIDTVKTPHDLPKLPVANALWKAQPDLPTASEAWILAGGAHH
+ TVFSHALDLNDMRQFAEMHDIEIAVIDNDTHLPGFKDALRWNDMYYSLKH"
+ misc_feature 2826769..2828268
+ /locus_tag="SARI_02903"
+ /note="L-arabinose isomerase; Provisional; Region:
+ PRK02929"
+ /db_xref="CDD:179503"
+ misc_feature 2826787..2828241
+ /locus_tag="SARI_02903"
+ /note="L-Arabinose isomerase (AI) catalyzes the
+ isomerization of L-arabinose to L-ribulose, the first
+ reaction in its conversion into D-xylulose-5-phosphate, an
+ intermediate in the pentose phosphate pathway, which
+ allows L-arabinose to be used as a carbon...; Region:
+ L-arabinose_isomerase; cd03557"
+ /db_xref="CDD:239619"
+ misc_feature order(2826949..2826951,2826961..2826963,2826970..2826972,
+ 2827030..2827032,2827186..2827191,2827297..2827299,
+ 2827318..2827320,2827354..2827356,2827363..2827365,
+ 2827384..2827404,2827414..2827416,2827579..2827581,
+ 2827606..2827611)
+ /locus_tag="SARI_02903"
+ /note="putative hexamer (dimer of trimers) interface
+ [polypeptide binding]; other site"
+ /db_xref="CDD:239619"
+ misc_feature order(2827015..2827017,2827021..2827032,2827078..2827080,
+ 2827084..2827086,2827093..2827095,2827099..2827101,
+ 2827105..2827107,2827114..2827122,2827129..2827131,
+ 2827147..2827152,2827159..2827164,2827171..2827173,
+ 2827180..2827185,2827189..2827191,2827204..2827206,
+ 2827210..2827212,2827243..2827245,2827327..2827338,
+ 2827768..2827785,2827960..2827968,2828023..2828025,
+ 2828029..2828034,2828038..2828040,2828083..2828088,
+ 2828095..2828097,2828104..2828106,2828113..2828115,
+ 2828167..2828169,2828236..2828241)
+ /locus_tag="SARI_02903"
+ /note="trimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:239619"
+ misc_feature order(2827015..2827017,2827603..2827605,2827684..2827686,
+ 2827765..2827767,2828113..2828118)
+ /locus_tag="SARI_02903"
+ /note="putative substrate binding site [chemical binding];
+ other site"
+ /db_xref="CDD:239619"
+ misc_feature order(2827684..2827686,2827765..2827767,2828116..2828118)
+ /locus_tag="SARI_02903"
+ /note="putative metal binding site [ion binding]; other
+ site"
+ /db_xref="CDD:239619"
+ gene 2828372..2829067
+ /gene="araD"
+ /locus_tag="SARI_02904"
+ CDS 2828372..2829067
+ /gene="araD"
+ /locus_tag="SARI_02904"
+ /inference="protein motif:Gene3D:IPR001303"
+ /inference="protein motif:HMMPfam:IPR001303"
+ /inference="protein motif:HMMTigr:IPR004661"
+ /inference="protein motif:superfamily:IPR001303"
+ /inference="similar to AA sequence:INSD:BAB96630.1"
+ /note="catalyzes the isomerization of L-ribulose
+ 5-phosphate to D-xylulose 5-phosphate in the anaerobic
+ catabolism of L-ascorbate; links the arabinose metabolic
+ pathway to the pentose phosphate pathway and allows the
+ bacteria to use arabinose as an energy source"
+ /codon_start=1
+ /transl_table=11
+ /product="L-ribulose-5-phosphate 4-epimerase"
+ /protein_id="YP_001571892.1"
+ /db_xref="GI:161504780"
+ /db_xref="InterPro:IPR001303"
+ /db_xref="InterPro:IPR004661"
+ /translation="MLEDLKHQVLEANLALPKHNLVTLTWGNVSAIDRERGVLVIKPS
+ GVDYSVMSADDMVVVSLETGQVVEGTKKPSSDTPTHRLLYQSFPTIGGIVHTHSRHAT
+ IWAQAGQSIPATGTTHADYFYGTIPCTRKMADAEINGEYEWETGNIIVETFEKQGIDA
+ THMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQTLLDKH
+ YLRKHGAKAYYGQ"
+ misc_feature 2828372..2829064
+ /gene="araD"
+ /locus_tag="SARI_02904"
+ /note="L-ribulose-5-phosphate 4-epimerase; Reviewed;
+ Region: araD; PRK08193"
+ /db_xref="CDD:236181"
+ misc_feature 2828378..2829040
+ /gene="araD"
+ /locus_tag="SARI_02904"
+ /note="Class II Aldolase and Adducin head (N-terminal)
+ domain. Aldolases are ubiquitous enzymes catalyzing
+ central steps of carbohydrate metabolism. Based on
+ enzymatic mechanisms, this superfamily has been divided
+ into two distinct classes (Class I and II); Region:
+ Aldolase_II; cd00398"
+ /db_xref="CDD:238232"
+ misc_feature order(2828402..2828404,2828414..2828416,2828438..2828440,
+ 2828510..2828512,2828516..2828521,2828660..2828662,
+ 2828666..2828671,2828684..2828692,2828711..2828713,
+ 2828717..2828722,2828762..2828764,2828879..2828881,
+ 2828912..2828914,2828933..2828935,2828945..2828947,
+ 2828966..2828968,2829026..2829028)
+ /gene="araD"
+ /locus_tag="SARI_02904"
+ /note="intersubunit interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238232"
+ misc_feature order(2828453..2828455,2828501..2828506,2828591..2828599,
+ 2828654..2828656,2828660..2828662,2828882..2828884)
+ /gene="araD"
+ /locus_tag="SARI_02904"
+ /note="active site"
+ /db_xref="CDD:238232"
+ misc_feature order(2828654..2828656,2828660..2828662,2828882..2828884)
+ /gene="araD"
+ /locus_tag="SARI_02904"
+ /note="Zn2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238232"
+ gene complement(2829055..2829492)
+ /locus_tag="SARI_02905"
+ CDS complement(2829055..2829492)
+ /locus_tag="SARI_02905"
+ /inference="similar to AA sequence:REFSEQ:YP_215081.1"
+ /note="'COG: NOG28502 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571893.1"
+ /db_xref="GI:161504781"
+ /translation="MNVNMQACLMGYDRYLFVNTQRANPSIKTVSRFFEYKTWTDQIW
+ RTEIIENGNAFFHWQGHDRKNGHRDTIINYLLNGQRWQSTIEDYTFFHALEGKALQGH
+ YDNIIEYVSSDNYVYQSAFAEYITDQTSSTRPKWDAPLGNYCP"
+ gene 2829518..2829667
+ /locus_tag="SARI_02906"
+ CDS 2829518..2829667
+ /locus_tag="SARI_02906"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571894.1"
+ /db_xref="GI:161504782"
+ /translation="MLIKHPHLEVKIKLHHKIKIKLCREFPTNSHCIPFLFNHSSQLK
+ YCIST"
+ gene 2830129..2832480
+ /locus_tag="SARI_02907"
+ CDS 2830129..2832480
+ /locus_tag="SARI_02907"
+ /inference="protein motif:HMMPanther:IPR006172"
+ /inference="protein motif:HMMPfam:IPR006133"
+ /inference="protein motif:HMMPfam:IPR006134"
+ /inference="protein motif:HMMSmart:IPR006172"
+ /inference="protein motif:ScanRegExp:IPR006172"
+ /inference="protein motif:superfamily:IPR012337"
+ /note="'Has polymerase, DNA-binding and 3'-5' exonuclease
+ activities. In Aeropyrum pernix this protein is sensitive
+ to aphidicolin and stable at 95#C'"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA polymerase II"
+ /protein_id="YP_001571895.1"
+ /db_xref="GI:161504783"
+ /db_xref="InterPro:IPR006133"
+ /db_xref="InterPro:IPR006134"
+ /db_xref="InterPro:IPR006172"
+ /db_xref="InterPro:IPR012337"
+ /translation="MAQAGFILTRHWRDTPQGTVVSFWLATDNGPLQATLAPQESVAF
+ IPTSQTPLAVSLLHKENDYRLKPLQLRDFHRQPVSGLYCRTHRQLMRMDKMLRENGVT
+ VYEADIRPPERYLMERFITSPVWVDGEMRNGIIRNARLKPHPDYRPPLKWVSLDIETT
+ RHGELYCIGLEGCGQRIVYMLGPANGDARQLDFELVYVASRPQLLEKLNAWFTEHDPD
+ VIIGWNVVQFDLRMLQKHAERYRIPLRLGRDNSELEWREHGFKNGVFFAQAKGRVIID
+ GIDALKSAFWNFSSFSLEAVSQELLGEGKSINNPWDRMDEIDRRFAQDKPALATYNLK
+ DCELVTQIFHKTEIMPFLLERATINGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLG
+ EVPPLASPGGYVMDSQPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHS
+ TEGFLDAWFSREKHCLPEIVSQIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTAC
+ RFFDPRLASSITMRGHAIMRQTKALIEAQGYDVIYGDTDSTFVWLRRAHSEADAAKIG
+ HMLVRHVNEWWAQTLQQQNLTSALELEFETHFCRFLMPTIRGADTGSKKRYAGLIQEG
+ ESQRMVFKGLETVRTDWTPLAQRFQQELYLRVFRNEPYQDYVRETIDKLMAGELDAQL
+ VYRKRLRRPLDEYQRNVPPHVRAARLADEQNLKRGRPAQYQNRGAIKYVWTVNGPEPV
+ DYQQSPLDYEHYLTRQLQPVAEGILPFIEDNFATLLTGQLGLF"
+ misc_feature 2830129..2832477
+ /locus_tag="SARI_02907"
+ /note="DNA polymerase II; Reviewed; Region: PRK05762"
+ /db_xref="CDD:235595"
+ misc_feature 2830570..2831160
+ /locus_tag="SARI_02907"
+ /note="DEDDy 3'-5' exonuclease domain of
+ Escherichia coli DNA polymerase II and similar bacterial
+ family-B DNA polymerases; Region: DNA_polB_II_exo;
+ cd05784"
+ /db_xref="CDD:99827"
+ misc_feature order(2830594..2830605,2830795..2830800,2830807..2830815,
+ 2831002..2831007,2831119..2831121,2831131..2831133)
+ /locus_tag="SARI_02907"
+ /note="active site"
+ /db_xref="CDD:99827"
+ misc_feature order(2830594..2830596,2830600..2830602,2830813..2830815,
+ 2831119..2831121,2831131..2831133)
+ /locus_tag="SARI_02907"
+ /note="catalytic site [active]"
+ /db_xref="CDD:99827"
+ misc_feature order(2830597..2830605,2830795..2830800,2830807..2830812,
+ 2831002..2831007,2831119..2831121,2831131..2831133)
+ /locus_tag="SARI_02907"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:99827"
+ misc_feature 2831317..2832435
+ /locus_tag="SARI_02907"
+ /note="DNA polymerase type-II subfamily catalytic domain.
+ Bacteria contain five DNA polymerases (I, II, III, IV and
+ V). DNA polymerase II (Pol II) is a prototype for the
+ B-family of polymerases. The role of Pol II in a variety
+ of cellular activities, such as...; Region: POLBc_Pol_II;
+ cd05537"
+ /db_xref="CDD:99920"
+ misc_feature order(2831383..2831385,2831392..2831400,2831557..2831559,
+ 2831605..2831607,2831617..2831619,2831767..2831769)
+ /locus_tag="SARI_02907"
+ /note="active site"
+ /db_xref="CDD:99920"
+ misc_feature order(2831761..2831763,2831767..2831769)
+ /locus_tag="SARI_02907"
+ /note="metal-binding site"
+ /db_xref="CDD:99920"
+ gene 2832655..2835561
+ /locus_tag="SARI_02908"
+ CDS 2832655..2835561
+ /locus_tag="SARI_02908"
+ /inference="protein motif:HMMPfam:IPR000330"
+ /inference="protein motif:HMMPfam:IPR001650"
+ /inference="protein motif:HMMSmart:IPR001650"
+ /inference="protein motif:HMMSmart:IPR014001"
+ /note="'transcription regulator that activates
+ transcription by stimulating RNA polymerase (RNAP)
+ recycling in case of stress conditions such as supercoiled
+ DNA or high salt concentrations. Probably acts by
+ releasing the RNAP, when it is trapped or immobilized on
+ tightly supercoiled DNA'"
+ /codon_start=1
+ /transl_table=11
+ /product="ATP-dependent helicase HepA"
+ /protein_id="YP_001571896.1"
+ /db_xref="GI:161504784"
+ /db_xref="InterPro:IPR000330"
+ /db_xref="InterPro:IPR001650"
+ /db_xref="InterPro:IPR014001"
+ /translation="MPFTLGQRWISDTESELGLGTVVAMDARTVTLLFPSTGENRLYA
+ RSDSPVTRVMFNPGDTITSHEGWQLHIDEVKEENGLLAYVGTRLDTEETNVTLREVLL
+ DSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPYSGLRGQRTNLIPHQLN
+ IAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVE
+ MLRRFNLRFALFDDERYTEAQHDAYNPFETEQLVICSLDFARRNKQRLEHLCDAEWDL
+ LVVDEAHHLVWSIDAPSREYMAIEQLAERVPGVLLLTATPEQLGMESHFARLRLLDPN
+ RFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNRLGDLIGEQDIEPLLQAANSD
+ RDDAQAARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTVKLPLPTQYQTAIKV
+ SGIMGARKSAEDRARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLV
+ ICAKATTALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIG
+ SEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRW
+ YHEGLDAFEHTCPTGRAIYDSAYASLINYLGAPEETDGFDDLITSCREQHEALKAQLE
+ QGRDRLLEIHSNGGEKAQQLAQSIEEQDDDTSLIAFAMNLFDIIGINQDDRGDNLIVL
+ TPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGS
+ STISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQV
+ EFETFNRQLSAVNRHTGSKLVNAVQQDVHAILQLGETQIEKSARALIDNARREADEKL
+ SGELSRLEALRAVNPNIRDDELAAIDSNRQQVLESLNQASWRLDALRLIVVTHQ"
+ misc_feature 2832658..2835552
+ /locus_tag="SARI_02908"
+ /note="ATP-dependent helicase HepA; Validated; Region:
+ PRK04914"
+ /db_xref="CDD:235319"
+ misc_feature 2833171..2833602
+ /locus_tag="SARI_02908"
+ /note="DEAD-like helicases superfamily. A diverse family
+ of proteins involved in ATP-dependent RNA or DNA
+ unwinding. This domain contains the ATP-binding region;
+ Region: DEXDc; cd00046"
+ /db_xref="CDD:238005"
+ misc_feature 2833192..2833206
+ /locus_tag="SARI_02908"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238005"
+ misc_feature 2833492..2833503
+ /locus_tag="SARI_02908"
+ /note="putative Mg++ binding site [ion binding]; other
+ site"
+ /db_xref="CDD:238005"
+ misc_feature 2834092..2834460
+ /locus_tag="SARI_02908"
+ /note="Helicase superfamily c-terminal domain; associated
+ with DEXDc-, DEAD-, and DEAH-box proteins, yeast
+ initiation factor 4A, Ski2p, and Hepatitis C virus NS3
+ helicases; this domain is found in a wide variety of
+ helicases and helicase related proteins; may...; Region:
+ HELICc; cd00079"
+ /db_xref="CDD:238034"
+ misc_feature order(2834185..2834196,2834257..2834262,2834341..2834349)
+ /locus_tag="SARI_02908"
+ /note="nucleotide binding region [chemical binding]; other
+ site"
+ /db_xref="CDD:238034"
+ misc_feature order(2834365..2834367,2834428..2834430,2834440..2834442,
+ 2834449..2834451)
+ /locus_tag="SARI_02908"
+ /note="ATP-binding site [chemical binding]; other site"
+ /db_xref="CDD:238034"
+ unsure 2835442..2836036
+ /note="Sequence derived from one plasmid subclone"
+ gene 2835573..2836232
+ /locus_tag="SARI_02909"
+ CDS 2835573..2836232
+ /locus_tag="SARI_02909"
+ /inference="protein motif:BlastProDom:IPR006145"
+ /inference="protein motif:HMMPfam:IPR006145"
+ /inference="protein motif:ScanRegExp:IPR006224"
+ /inference="similar to AA sequence:REFSEQ:YP_215077.1"
+ /note="catalyzes the synthesis of pseudouridine from
+ uracil-746 in 23S ribosomal RNA and from uracil-32 in the
+ anticodon stem and loop of transfer RNAs"
+ /codon_start=1
+ /transl_table=11
+ /product="23S rRNA/tRNA pseudouridine synthase A"
+ /protein_id="YP_001571897.1"
+ /db_xref="GI:161504785"
+ /db_xref="InterPro:IPR006145"
+ /db_xref="InterPro:IPR006224"
+ /translation="MGMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEAHKD
+ SIMTRIQRDYPQAESVHRLDMATSGVIVVALTKAAERELKRQFREREPKKQYIARVWG
+ HPTPAEGLIDLPLICDWPNRPKQKVCYETGKPAQTEYNVVDFAADNTARVALQPITGR
+ SHQLRVHMQALGHPILGDRFYASPEALSLAPRLHLHAEMLTITHPTYGTSMTFKAPAD
+ F"
+ misc_feature <2835597..2836229
+ /locus_tag="SARI_02909"
+ /note="Pseudouridylate synthases, 23S RNA-specific
+ [Translation, ribosomal structure and biogenesis]; Region:
+ RluA; COG0564"
+ /db_xref="CDD:223638"
+ misc_feature 2835639..2836178
+ /locus_tag="SARI_02909"
+ /note="Pseudouridine synthase, RsuA/RluD family; Region:
+ PseudoU_synth_RluCD_like; cd02869"
+ /db_xref="CDD:211346"
+ misc_feature order(2835753..2835764,2836065..2836067)
+ /locus_tag="SARI_02909"
+ /note="active site"
+ /db_xref="CDD:211346"
+ gene complement(2836308..2837117)
+ /gene="djlA"
+ /locus_tag="SARI_02910"
+ CDS complement(2836308..2837117)
+ /gene="djlA"
+ /locus_tag="SARI_02910"
+ /inference="protein motif:HMMPfam:IPR001623"
+ /inference="protein motif:HMMSmart:IPR001623"
+ /inference="protein motif:superfamily:IPR001623"
+ /inference="similar to AA sequence:SwissProt:Q5PDE4"
+ /note="functions as a co-chaperone with DnaK; involved in
+ regulation of colanic acid capsule; inner membrane
+ protein; dimerized via transmembrane domain; J-like domain
+ is cytoplasmic and can functionally substitute for DnaJ;
+ stimulates synthesis of colanic acid mucoid capsule
+ through the RcsB/C signal transduction system"
+ /codon_start=1
+ /transl_table=11
+ /product="Dna-J like membrane chaperone protein"
+ /protein_id="YP_001571898.1"
+ /db_xref="GI:161504786"
+ /db_xref="InterPro:IPR001623"
+ /translation="MQYWGKIIGVAVALMMGGGFWGVVLGLLVGHMFDKARSRKMAWF
+ ANQRERQALFFTTTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGDSRTAAQNAFR
+ VGKADNYPLREKMRQFRSACFGRFDLIRMFLEIQIQAAFADGSLHPNEREVLYVIAEE
+ LGISRMQFDQFLRMMQGGAQFGGGYHQQSGGWQQAQRGPTLEDACNVLGVKTTDDATT
+ IKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAYELIKEQKGFK"
+ misc_feature complement(2836311..2837117)
+ /gene="djlA"
+ /locus_tag="SARI_02910"
+ /note="Dna-J like membrane chaperone protein; Provisional;
+ Region: djlA; PRK09430"
+ /db_xref="CDD:236512"
+ misc_feature complement(2836632..2836949)
+ /gene="djlA"
+ /locus_tag="SARI_02910"
+ /note="N-terminal tellurium resistance protein terB-like
+ domain of heat shock DnaJ-like proteins; Region:
+ terB_like_DjlA; cd07316"
+ /db_xref="CDD:143585"
+ misc_feature complement(order(2836668..2836670,2836689..2836691,
+ 2836890..2836892,2836911..2836913))
+ /gene="djlA"
+ /locus_tag="SARI_02910"
+ /note="putative metal binding site [ion binding]; other
+ site"
+ /db_xref="CDD:143585"
+ misc_feature complement(2836338..2836499)
+ /gene="djlA"
+ /locus_tag="SARI_02910"
+ /note="DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock
+ protein 40) proteins are highly conserved and play crucial
+ roles in protein translation, folding, unfolding,
+ translocation, and degradation. They act primarily by
+ stimulating the ATPase activity of Hsp70s; Region: DnaJ;
+ cd06257"
+ /db_xref="CDD:99751"
+ misc_feature complement(order(2836347..2836352,2836359..2836364,
+ 2836371..2836373,2836419..2836427))
+ /gene="djlA"
+ /locus_tag="SARI_02910"
+ /note="HSP70 interaction site [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99751"
+ gene 2837371..2839731
+ /locus_tag="SARI_02911"
+ CDS 2837371..2839731
+ /locus_tag="SARI_02911"
+ /inference="protein motif:HMMPfam:IPR005653"
+ /inference="protein motif:HMMPfam:IPR007543"
+ /note="determines N-hexane tolerance and is involved in
+ outer membrane permeability"
+ /codon_start=1
+ /transl_table=11
+ /product="organic solvent tolerance protein"
+ /protein_id="YP_001571899.1"
+ /db_xref="GI:161504787"
+ /db_xref="InterPro:IPR005653"
+ /db_xref="InterPro:IPR007543"
+ /translation="MKKRIPTLLATMIASALYSHQGLAADLASQCMLGVPSYDRPLVK
+ GDTNDLPVTINADNAKGNYPDDAVFTGNVDIMQGNSRLQADEVQLHQKQAEGQPEPIR
+ TVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGEN
+ RYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKVGPVPIFYSPYLQL
+ PVGDKRRSGFLIPNAKYTTNNYFEFYLPYYWNIAPNMDATITPHYIHRRGNIMWENEF
+ RYLTQAGAGLMELDYLPSDKVYEDDHPKEGDKHRWLFYWQHSGVMDQVWRFNVDYTKV
+ SDSSYFNDFDSKYGSSTDGYATQKFSVGYAVQNFDATVSTKQFQVFNDQNTSSYSAEP
+ QLDVNYYHNDLGPFDTRIYGQAVHFVNTKDNMPEATRVHLEPTINLPLSNRWGSLNTE
+ AKLMATHYQQTNLDSYNSDPNNKNKLEDSVNRVMPQFKVDGKLVFERDMAMLAPGYTQ
+ TLEPRVQYLYVPYRDQSGIYNYDSSLLQSDYNGLFRDRTYGGLDRIASANQVTTGVTT
+ RIYDDAAVERFNVSVGQIYYFTESRTGDDNIKWENDDKTGSLVWAGDTYWRISERWGL
+ RSGVQYDTRLDSVATSSSSLEYRRDQDRLVQLNYRYASPEYIQATLPSSYSTAEQYKN
+ GINQVGAVASWPIADRWSIVGAYYFDTNSSKPADQMLGLQYNSCCYAIRVGYERKLNG
+ WDNDKQHAIYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQNSM"
+ misc_feature 2837371..2839728
+ /locus_tag="SARI_02911"
+ /note="LPS assembly outer membrane complex protein LptD;
+ Provisional; Region: PRK03761"
+ /db_xref="CDD:235158"
+ misc_feature 2837527..2837955
+ /locus_tag="SARI_02911"
+ /note="OstA-like protein; Region: OstA; pfam03968"
+ /db_xref="CDD:217820"
+ misc_feature 2838292..2839467
+ /locus_tag="SARI_02911"
+ /note="Organic solvent tolerance protein; Region: OstA_C;
+ pfam04453"
+ /db_xref="CDD:218093"
+ gene 2839785..2841071
+ /locus_tag="SARI_02912"
+ CDS 2839785..2841071
+ /locus_tag="SARI_02912"
+ /inference="protein motif:HMMPfam:IPR000297"
+ /inference="protein motif:ScanRegExp:IPR000297"
+ /inference="similar to AA sequence:INSD:AAL19056.1"
+ /note="'Chaperone involved in the folding of
+ extracytoplasmic proteins, especially OmpA, OmpF and
+ LamB'"
+ /codon_start=1
+ /transl_table=11
+ /product="peptidyl-prolyl cis-trans isomerase SurA"
+ /protein_id="YP_001571900.1"
+ /db_xref="GI:161504788"
+ /db_xref="InterPro:IPR000297"
+ /translation="MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDG
+ LMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIILQMGQKMGVKITDEQLDQAIAN
+ IAKQNNMTLDQMRSRLAYDGLNYSTYRNQIRKEMIISEVRNNEVRRRITVLPQEVDAL
+ AKQIGTQNDANTELNLSHILIALPENPTSGQVNDAQRQAESIVEEARNGADFGKLAIT
+ YSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGQ
+ SPNISVTEVHARHILLKPSPIMTDQQARLKLEEIAADIKSGKTTFAAAAKEYSQDPGS
+ ANQGGDLGWATPDIFDPAFRDALTKLHKGQMSAPVHSSFGWHLIELLDTRKVDKTDAA
+ QKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN"
+ misc_feature 2839839..2841068
+ /locus_tag="SARI_02912"
+ /note="peptidyl-prolyl cis-trans isomerase SurA;
+ Provisional; Region: PRK10770"
+ /db_xref="CDD:236758"
+ misc_feature 2839857..2840210
+ /locus_tag="SARI_02912"
+ /note="SurA N-terminal domain; Region: SurA_N; pfam09312"
+ /db_xref="CDD:150092"
+ misc_feature 2840316..2840600
+ /locus_tag="SARI_02912"
+ /note="PPIC-type PPIASE domain; Region: Rotamase;
+ pfam00639"
+ /db_xref="CDD:216038"
+ misc_feature 2840649..2840930
+ /locus_tag="SARI_02912"
+ /note="PPIC-type PPIASE domain; Region: Rotamase;
+ pfam00639"
+ /db_xref="CDD:216038"
+ gene 2841071..2842060
+ /gene="pdxA"
+ /locus_tag="SARI_02913"
+ CDS 2841071..2842060
+ /gene="pdxA"
+ /locus_tag="SARI_02913"
+ /inference="protein motif:HMMPfam:IPR005255"
+ /inference="protein motif:HMMTigr:IPR005255"
+ /inference="similar to AA sequence:INSD:CAD01247.1"
+ /note="catalyzes oxidation of
+ 4-(phosphohydroxy)-L-threonine into
+ 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which
+ decarboxylates to form
+ 1-amino-3-(phosphohydroxy)propan-2-one
+ (3-amino-2-oxopropyl phosphate)"
+ /codon_start=1
+ /transl_table=11
+ /product="4-hydroxythreonine-4-phosphate dehydrogenase"
+ /protein_id="YP_001571901.1"
+ /db_xref="GI:161504789"
+ /db_xref="InterPro:IPR005255"
+ /translation="MSSAQRVVITPGEPAGIGPDLVVQLAQRAWPIELVVCADGPLLT
+ ERAAMLGLPLSLLPYSPDVPAAPQPAGTLTLLPVSLRAPAIPGQLTVENGPYVVETLA
+ RACDGCLQHEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEALRV
+ ALATTHLPLRAIADAITPALLHDVIAILHHDLRTKFGLRNPHILVCGLNPHAGEGGHM
+ GTEEIDTIIPVLDELRAQGMHLTGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQ
+ GFGRGVNITLGLPFIRTSVDHGTALELAGQGKADVGSFITALNLAIKMIVNTQ"
+ misc_feature 2841071..2842057
+ /gene="pdxA"
+ /locus_tag="SARI_02913"
+ /note="4-hydroxythreonine-4-phosphate dehydrogenase;
+ Reviewed; Region: pdxA; PRK00232"
+ /db_xref="CDD:234696"
+ misc_feature 2841089..2842039
+ /gene="pdxA"
+ /locus_tag="SARI_02913"
+ /note="4-hydroxythreonine-4-phosphate dehydrogenase;
+ Validated; Region: pdxA; PRK03743"
+ /db_xref="CDD:179641"
+ gene 2842057..2842878
+ /gene="ksgA"
+ /locus_tag="SARI_02914"
+ CDS 2842057..2842878
+ /gene="ksgA"
+ /locus_tag="SARI_02914"
+ /inference="protein motif:HMMPanther:IPR001737"
+ /inference="protein motif:HMMPfam:IPR001737"
+ /inference="protein motif:HMMSmart:IPR001737"
+ /inference="protein motif:HMMTigr:IPR011530"
+ /inference="protein motif:ScanRegExp:IPR001737"
+ /inference="similar to AA sequence:REFSEQ:NP_454702.1"
+ /note="catalyzes the transfer of a total of four methyl
+ groups from S-adenosyl-l-methionine (S-AdoMet) to two
+ adjacent adenosine bases A1518 and A1519 in 16S rRNA;
+ mutations in ksgA causes resistance to the translation
+ initiation inhibitor kasugamycin"
+ /codon_start=1
+ /transl_table=11
+ /product="dimethyladenosine transferase"
+ /protein_id="YP_001571902.1"
+ /db_xref="GI:161504790"
+ /db_xref="InterPro:IPR001737"
+ /db_xref="InterPro:IPR011530"
+ /translation="MNNRVHQGHLARKRFGQNFLNDRFVIDSIVSAINPQKGQAMVEI
+ GPGLAALTEPVGERLDKLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELSA
+ QLGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRL
+ SVMAQYYCQVIPVLGVPPSAFTPPPKVDSAVVRLVPHATMPYPVKDIRVLSRITTEAF
+ NQRRKTIRNSLGNLFSVETLTEMGIDPAMRAENISVAQYCQMANYLSENAPLKES"
+ misc_feature 2842057..2842857
+ /gene="ksgA"
+ /locus_tag="SARI_02914"
+ /note="16S ribosomal RNA methyltransferase KsgA/Dim1
+ family protein; Reviewed; Region: ksgA; PRK00274"
+ /db_xref="CDD:234708"
+ misc_feature 2842087..2842848
+ /gene="ksgA"
+ /locus_tag="SARI_02914"
+ /note="Dimethyladenosine transferase (rRNA methylation)
+ [Translation, ribosomal structure and biogenesis]; Region:
+ KsgA; COG0030"
+ /db_xref="CDD:223109"
+ gene 2842881..2843258
+ /gene="apaG"
+ /locus_tag="SARI_02915"
+ CDS 2842881..2843258
+ /gene="apaG"
+ /locus_tag="SARI_02915"
+ /inference="protein motif:HMMPfam:IPR007474"
+ /inference="similar to AA sequence:INSD:AAV76123.1"
+ /note="protein associated with Co2+ and Mg2+ efflux"
+ /codon_start=1
+ /transl_table=11
+ /product="ApaG"
+ /protein_id="YP_001571903.1"
+ /db_xref="GI:161504791"
+ /db_xref="InterPro:IPR007474"
+ /translation="MINSPRVCIQVQSVYIEAQSSPDDERYVFAYTVTIRNLGRAPVQ
+ LLGRYWLITNGHGRETEVQGEGVVGVQPRIAPGEEYQYTSGAVIETPLGTMQGHYEMI
+ DENGDAFTIDIPVFRLAVPTLIH"
+ misc_feature 2842881..2843255
+ /gene="apaG"
+ /locus_tag="SARI_02915"
+ /note="CO2+/MG2+ efflux protein ApaG; Reviewed; Region:
+ apaG; PRK05461"
+ /db_xref="CDD:180098"
+ gene 2843269..2844117
+ /gene="apaH"
+ /locus_tag="SARI_02916"
+ CDS 2843269..2844117
+ /gene="apaH"
+ /locus_tag="SARI_02916"
+ /inference="protein motif:HMMPfam:IPR004843"
+ /inference="protein motif:HMMPIR:IPR004617"
+ /inference="protein motif:HMMTigr:IPR004617"
+ /inference="similar to AA sequence:INSD:"
+ /note="'hydrolyzes P(1),P(4)-bis(5'-adenosyl)
+ tetraphosphate to form 2 ADP'"
+ /codon_start=1
+ /transl_table=11
+ /product="diadenosine tetraphosphatase"
+ /protein_id="YP_001571904.1"
+ /db_xref="GI:161504792"
+ /db_xref="InterPro:IPR004617"
+ /db_xref="InterPro:IPR004843"
+ /translation="MATYLIGDVHGCYDELIALLQQVEFTPETDTLWLTGDLVARGPG
+ SLDVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDADELLNWL
+ RRQPLLQVDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMYGDMP
+ NNWSPELSGLARLRFITNAFTRMRYCFPNGQLDMYSKASPENAPAPLKPWFAIPGPVS
+ EAYSIAFGHWASLDGKGTPDGIYALDTGCCWGGKLTCLRWEDKQYFVQPSNRQMDMGE
+ GEAINA"
+ misc_feature 2843269..2844105
+ /gene="apaH"
+ /locus_tag="SARI_02916"
+ /note="bis(5'-nucleosyl)-tetraphosphatase
+ (symmetrical); Region: apaH; TIGR00668"
+ /db_xref="CDD:233082"
+ misc_feature 2843275..2844045
+ /gene="apaH"
+ /locus_tag="SARI_02916"
+ /note="Escherichia coli ApaH and related proteins,
+ metallophosphatase domain; Region: MPP_ApaH; cd07422"
+ /db_xref="CDD:163665"
+ misc_feature order(2843290..2843292,2843296..2843298,2843377..2843379,
+ 2843386..2843391,2843461..2843466,2843626..2843628,
+ 2843947..2843949,2843998..2844000,2844013..2844015)
+ /gene="apaH"
+ /locus_tag="SARI_02916"
+ /note="active site"
+ /db_xref="CDD:163665"
+ misc_feature order(2843290..2843292,2843296..2843298,2843377..2843379,
+ 2843461..2843463,2843626..2843628,2843947..2843949)
+ /gene="apaH"
+ /locus_tag="SARI_02916"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:163665"
+ gene complement(2844264..2844743)
+ /gene="folA"
+ /locus_tag="SARI_02917"
+ CDS complement(2844264..2844743)
+ /gene="folA"
+ /locus_tag="SARI_02917"
+ /inference="protein motif:FPrintScan:IPR001796"
+ /inference="protein motif:HMMPfam:IPR001796"
+ /inference="protein motif:HMMPIR:IPR012259"
+ /inference="protein motif:ScanRegExp:IPR001796"
+ /inference="similar to AA sequence:REFSEQ:YP_215069.1"
+ /note="catalyzes the reduction of dihydrofolate to
+ tetrahydrofolate"
+ /codon_start=1
+ /transl_table=11
+ /product="dihydrofolate reductase"
+ /protein_id="YP_001571905.1"
+ /db_xref="GI:161504793"
+ /db_xref="InterPro:IPR001796"
+ /db_xref="InterPro:IPR012259"
+ /translation="MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVVMGR
+ HTWESIGRPLPGRKNIVISSQSGTDDRVQWVKSVDEAIAACGDAPEIMVIGGGRVYEQ
+ FLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR"
+ misc_feature complement(2844267..2844743)
+ /gene="folA"
+ /locus_tag="SARI_02917"
+ /note="Dihydrofolate reductase [Coenzyme metabolism];
+ Region: FolA; COG0262"
+ /db_xref="CDD:223340"
+ misc_feature complement(2844273..2844740)
+ /gene="folA"
+ /locus_tag="SARI_02917"
+ /note="Dihydrofolate reductase (DHFR). Reduces
+ 7,8-dihydrofolate to 5,6,7,8-tetrahydrofolate with NADPH
+ as a cofactor. This is an essential step in the
+ biosynthesis of deoxythymidine phosphate since
+ 5,6,7,8-tetrahydrofolate is required to regenerate 5;
+ Region: DHFR; cd00209"
+ /db_xref="CDD:238127"
+ misc_feature complement(order(2844405..2844407,2844444..2844446,
+ 2844462..2844464,2844573..2844575,2844663..2844665,
+ 2844678..2844680,2844729..2844731))
+ /gene="folA"
+ /locus_tag="SARI_02917"
+ /note="folate binding site [chemical binding]; other site"
+ /db_xref="CDD:238127"
+ misc_feature complement(order(2844450..2844461,2844552..2844554,
+ 2844606..2844614,2844702..2844704,2844723..2844725))
+ /gene="folA"
+ /locus_tag="SARI_02917"
+ /note="NADP+ binding site [chemical binding]; other site"
+ /db_xref="CDD:238127"
+ gene complement(2844941..2846803)
+ /locus_tag="SARI_02918"
+ CDS complement(2844941..2846803)
+ /locus_tag="SARI_02918"
+ /inference="protein motif:HMMPfam:IPR003148"
+ /inference="protein motif:HMMPfam:IPR006153"
+ /inference="protein motif:HMMTigr:IPR004771"
+ /note="transport system that facilitates potassium-efflux"
+ /codon_start=1
+ /transl_table=11
+ /product="glutathione-regulated potassium-efflux system
+ protein KefC"
+ /protein_id="YP_001571906.1"
+ /db_xref="GI:161504794"
+ /db_xref="InterPro:IPR003148"
+ /db_xref="InterPro:IPR004771"
+ /db_xref="InterPro:IPR006153"
+ /translation="MDSHTLMQALIYLGSAALIVPIAVRLGLGSVLGYLIAGCIIGPW
+ GLRLVTDAESILHFAEIGVVLMLFVIGLELDPQRLWKLRASVFGGGALQMVICGGLIG
+ FFCMFLGLRWQVAELIGMTLALSSTAIAMQAMNERNLTVSQVGRSAFAVLLFQDIAAI
+ PLVAMIPLLAASGASTTLGAFALSALKVAGALALVVLLGRYVTRPALRFVARSGLREV
+ FSAVALFLVFGFGLLLEEVGLSMAMGAFLAGVLLASSEYRHALESDIEPFKGLLLGLF
+ FIGVGMSIDFGTLVDNPLRILLLLAGFLAIKIVMLWLIARPLGVPAKQRRWFAVLLGQ
+ GSEFAFVVFGAAQMADVLEPEWAKALTLAVALSMAATPIFLVLLTRMEKAATGEAREA
+ DEIDEEQPRVIVAGFGRFGQIAGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDA
+ TRMDLLESAGAAKAEVLINAIDDPQTNLQLSELVKTHFPHLQIIARARDVDHYIRLRQ
+ AGVAMPERETFESALKSGRQALEALGLGRYEARERADLFRHFNTQMVEEMAKGENDPL
+ SRAAAYKRTSAMLSEIITEDREHLSLIQRHGWQGTAEGKHTGDIADEPQVKPST"
+ misc_feature complement(2844944..2846803)
+ /locus_tag="SARI_02918"
+ /note="glutathione-regulated potassium-efflux system
+ protein KefC; Provisional; Region: PRK03562"
+ /db_xref="CDD:235131"
+ misc_feature complement(2845949..2846767)
+ /locus_tag="SARI_02918"
+ /note="transporter, monovalent cation:proton antiporter-2
+ (CPA2) family; Region: 2a37; TIGR00932"
+ /db_xref="CDD:233195"
+ misc_feature complement(2845271..2845600)
+ /locus_tag="SARI_02918"
+ /note="TrkA-N domain; Region: TrkA_N; pfam02254"
+ /db_xref="CDD:216949"
+ gene complement(2846796..2847326)
+ /locus_tag="SARI_02919"
+ CDS complement(2846796..2847326)
+ /locus_tag="SARI_02919"
+ /inference="protein motif:HMMPfam:IPR003680"
+ /inference="similar to AA sequence:REFSEQ:YP_215067.1"
+ /note="'Required for full activity of KefC, a
+ potassium-proton antiporter'"
+ /codon_start=1
+ /transl_table=11
+ /product="glutathione-regulated potassium-efflux system
+ ancillary protein KefF"
+ /protein_id="YP_001571907.1"
+ /db_xref="GI:161504795"
+ /db_xref="InterPro:IPR003680"
+ /translation="MILIIYAHPYPHHSHANKRMLEQAGTLENVEIRSLYHLYPDFNI
+ DVAAEQQALSRATLIVWQHPMQWYSVPPLLKLWMDKVLAHGWAYGHGGTALHGKHLLW
+ AVTTGGGENHFTIGSHPGFDVLSQPLQATALYCGLTWLPPFAMHCTFICDDDTLQAQA
+ RHYKQRLLAWQEANHG"
+ misc_feature complement(2846799..2847326)
+ /locus_tag="SARI_02919"
+ /note="glutathione-regulated potassium-efflux system
+ ancillary protein KefF; Provisional; Region: PRK00871"
+ /db_xref="CDD:234852"
+ gene complement(2847426..2847689)
+ /locus_tag="SARI_02920"
+ CDS complement(2847426..2847689)
+ /locus_tag="SARI_02920"
+ /inference="protein motif:HMMPfam:IPR010305"
+ /inference="similar to AA sequence:REFSEQ:YP_149427.1"
+ /note="'KEGG: efa:EF0685 0.0030 rotamase family protein
+ K07533;
+ COG: NOG17119 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571908.1"
+ /db_xref="GI:161504796"
+ /db_xref="InterPro:IPR010305"
+ /translation="MLKQLKSRENTMQKRLMTALFTAATLFTVAGCSSNQAVKTTDGK
+ TIVTDGKPEVDNDTGMVSYKNAATGKTEQINRDQLKNMSELDN"
+ misc_feature complement(2847435..2847587)
+ /locus_tag="SARI_02920"
+ /note="Bacterial protein of unknown function (DUF903);
+ Region: DUF903; pfam06004"
+ /db_xref="CDD:203370"
+ gene complement(2847745..2849085)
+ /locus_tag="SARI_02921"
+ CDS complement(2847745..2849085)
+ /locus_tag="SARI_02921"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="similar to AA sequence:REFSEQ:YP_149426.1"
+ /note="'KEGG: cal:orf19.4384 4.7e-15 HXT10; fructose
+ symporter K01804;
+ COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571909.1"
+ /db_xref="GI:161504797"
+ /db_xref="InterPro:IPR011701"
+ /translation="MPQPRNFDDLKFSSIHRRIMLWGSGGPFLDGYVLVIIGVALEQL
+ TPLLHLDAEWIGALGAATLAGLFIGTSLFGYICDKVGRRKMFLLDIIAIGALSVATMF
+ VSTPLELLVMRVLIGIVIGADYPIATSMITEFSNTRQRAFSIGFIAAMWYVGATCANL
+ VGYWLYDIESGWRWMLGSAFIPCLIILIGRFDLPESPRWLLRKGRVKECEQMMIKLFG
+ EPVCFDDEPPQETRFLQLFNRRHFPFVLFVAAIWTCQVIPMFAIYTFGPQIVGLLGWE
+ QGRSAALGNVVISLFFMLGCIPAMFWLNSIGRRPLLIGSFAMMTIALALLGLVSNLGI
+ ILVVVAFAVYAFFSGGPGILQWLYPNELFPTDIRASAVGVIMSLSRIGTIVSTWALPI
+ FITRYGINNVMLIGALISLVGLGVSVMFAPETRGLTLTQTGNMTLRGTPSDNPH"
+ misc_feature complement(2847823..2849028)
+ /locus_tag="SARI_02921"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature complement(2847799..2849010)
+ /locus_tag="SARI_02921"
+ /note="Sugar (and other) transporter; Region: Sugar_tr;
+ pfam00083"
+ /db_xref="CDD:215702"
+ misc_feature complement(order(2847937..2847939,2847946..2847951,
+ 2847958..2847963,2847970..2847975,2848012..2848014,
+ 2848021..2848026,2848036..2848038,2848045..2848050,
+ 2848057..2848059,2848198..2848200,2848210..2848212,
+ 2848219..2848221,2848231..2848233,2848243..2848245,
+ 2848285..2848287,2848294..2848299,2848306..2848311,
+ 2848318..2848320,2848621..2848623,2848639..2848644,
+ 2848651..2848656,2848690..2848692,2848699..2848704,
+ 2848711..2848716,2848723..2848728,2848864..2848869,
+ 2848873..2848878,2848888..2848890,2848897..2848902,
+ 2848909..2848911,2848960..2848965,2848969..2848977,
+ 2848984..2848986))
+ /locus_tag="SARI_02921"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene complement(2849196..2849483)
+ /locus_tag="SARI_02922"
+ CDS complement(2849196..2849483)
+ /locus_tag="SARI_02922"
+ /inference="protein motif:HMMPIR:IPR012206"
+ /inference="similar to AA sequence:SwissProt:Q8ZRW8"
+ /note="'KEGG: hma:rrnAC0094 1.7e-05 ydiS; flavoprotein
+ probably electron transport K00313;
+ COG: COG2440 Ferredoxin-like protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571910.1"
+ /db_xref="GI:161504798"
+ /db_xref="InterPro:IPR012206"
+ /translation="MTSPVNVDVKLGVNKFNVDENNPHIVLKTEPDKQALEVLIKACP
+ AGLYKKQDDGSVRFDYAGCLECGTCRILGLDSALEKWEYPRGTFGVEFRYG"
+ misc_feature complement(2849199..2849483)
+ /locus_tag="SARI_02922"
+ /note="ferredoxin-like protein FixX; Provisional; Region:
+ PRK15449"
+ /db_xref="CDD:185346"
+ misc_feature complement(2849355..>2849423)
+ /locus_tag="SARI_02922"
+ /note="RPB11 and RPB3 subunits of RNA polymerase; Region:
+ RNAP_RPB11_RPB3; cl11409"
+ /db_xref="CDD:245605"
+ gene complement(2849480..2850766)
+ /locus_tag="SARI_02923"
+ CDS complement(2849480..2850766)
+ /locus_tag="SARI_02923"
+ /inference="protein motif:HMMPfam:IPR006076"
+ /inference="similar to AA sequence:INSD:CAD01231.1"
+ /note="FAD/NAD(P)-binding domain; possibly part of an
+ electron transfer system required for anaerobic carnitine
+ reduction"
+ /codon_start=1
+ /transl_table=11
+ /product="putative oxidoreductase FixC"
+ /protein_id="YP_001571911.1"
+ /db_xref="GI:161504799"
+ /db_xref="InterPro:IPR006076"
+ /translation="MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKN
+ VTGGRLYAHSLERILPDFAARAPVERLITHEKLAFMTEQGVMAVDYVNAEEQAPSRRS
+ YSVLRSKFDAWLMEQAEEAGAQLITGIRVDNVVQRDGKVVGVEADGDIIEAKVVILAD
+ GVNSLLAEKLGMAKRVNASHVAVGVKELIELPKSVIEDRFQLRGNEGAACLFAGAPTA
+ GLMGGGFLYTNETTLSLGLVCGLHHLNAATKSVPQMLEDFKQHPAVAPLIAGGKLVEY
+ AAHVVPEAGFAMQPELVSDGVLIAGDAGGMCMNLGFTIRGMDLAVAAGDAAAKTVLSA
+ LRSADFSRQKLAEYHQHLDNGLMRDMRMYQRLPAFLDNPRMFTRYPEMAVGIARDLFT
+ VDGGAPEAMRKKILRHAKKVGLINLMKDGIKGATAL"
+ misc_feature complement(2849483..2850766)
+ /locus_tag="SARI_02923"
+ /note="putative oxidoreductase FixC; Provisional; Region:
+ PRK10157"
+ /db_xref="CDD:182273"
+ gene complement(2850815..2851759)
+ /gene="fixB"
+ /locus_tag="SARI_02924"
+ CDS complement(2850815..2851759)
+ /gene="fixB"
+ /locus_tag="SARI_02924"
+ /inference="protein motif:HMMPfam:IPR000049"
+ /inference="protein motif:HMMPfam:IPR001308"
+ /inference="protein motif:HMMPIR:IPR001308"
+ /inference="protein motif:ScanRegExp:IPR001308"
+ /inference="similar to AA sequence:REFSEQ:YP_215058.1"
+ /note="involved in electron transfer during carnitine
+ metabolism"
+ /codon_start=1
+ /transl_table=11
+ /product="putative electron transfer flavoprotein FixB"
+ /protein_id="YP_001571912.1"
+ /db_xref="GI:161504800"
+ /db_xref="InterPro:IPR000049"
+ /db_xref="InterPro:IPR001308"
+ /translation="MSKFSSVWVFSDTPSRLPELMGGAQHTGEQINVFVLSEADSEAA
+ FHFGADRVWFLRGKPDDRMVEDYAEAMVETLHKHGGEAGMVLLPNTRRGKLLAAKLGY
+ RLAAAVSNDASSVVPQAEGAAVKHMVYGGLAMGEETITSPWAVVTLSSGAFEPAQADT
+ ARRGEAQSVEWIAPAIAVTRTATQARQSNRVDLDKARLVVSVGRGIGSKENIALAQAL
+ CQTIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAIGISGQIQHMVGANGSQ
+ TICAINKDKNAPIFQYADYGIVGDAVKILPALTQALAR"
+ misc_feature complement(2850818..2851759)
+ /gene="fixB"
+ /locus_tag="SARI_02924"
+ /note="putative electron transfer flavoprotein FixB;
+ Provisional; Region: fixB; PRK03363"
+ /db_xref="CDD:235120"
+ misc_feature complement(2851283..2851705)
+ /gene="fixB"
+ /locus_tag="SARI_02924"
+ /note="Electron transfer flavoprotein domain; Region: ETF;
+ smart00893"
+ /db_xref="CDD:214890"
+ misc_feature complement(2850932..2851192)
+ /gene="fixB"
+ /locus_tag="SARI_02924"
+ /note="Electron transfer flavoprotein FAD-binding domain;
+ Region: ETF_alpha; pfam00766"
+ /db_xref="CDD:189709"
+ gene complement(2851769..2852605)
+ /locus_tag="SARI_02925"
+ CDS complement(2851769..2852605)
+ /locus_tag="SARI_02925"
+ /inference="protein motif:BlastProDom:IPR000049"
+ /inference="protein motif:HMMPfam:IPR000049"
+ /inference="protein motif:HMMPIR:IPR012255"
+ /inference="protein motif:ScanRegExp:IPR000049"
+ /inference="similar to AA sequence:REFSEQ:NP_752004.1"
+ /note="'required for anaerobic carnitine reduction, may
+ act to transfer electrons to crotonobetaine reductase'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative electron transfer flavoprotein FixA"
+ /protein_id="YP_001571913.1"
+ /db_xref="GI:161504801"
+ /db_xref="InterPro:IPR000049"
+ /db_xref="InterPro:IPR012255"
+ /translation="MISVFNTADIEDVSFMISGDAMKILTCYKCVPDEQDIVINNEDG
+ SLDTHKADAKISQYDLNAIETACQLKQQAGDAVVTAMSVGGQALINAKGRKDVLSRGP
+ DDLIVVIDEQFEQALPQQTAAALAAAAQKAGFDLIICGDGSSDLYAQQVSLLLGETLH
+ IPAINGVRNILSLSEDALIVERELEDEIETLHIPLPAVVAVSTDINSPQIPSMKAILG
+ AAKKPVQVWSAADIGFCAAADYSSQRVAAPKQRERQRIVIEGESEEQIAAFAENLRKI
+ IK"
+ misc_feature complement(2851922..2852539)
+ /locus_tag="SARI_02925"
+ /note="The electron transfer flavoprotein (ETF) serves as
+ a specific electron acceptor for various mitochondrial
+ dehydrogenases. ETF transfers electrons to the main
+ respiratory chain via ETF-ubiquinone oxidoreductase. ETF
+ is an heterodimer that consists of an...; Region:
+ ETF_beta; cd01714"
+ /db_xref="CDD:238847"
+ misc_feature complement(order(2852153..2852164,2852177..2852182,
+ 2852186..2852191,2852357..2852359,2852429..2852431,
+ 2852438..2852440,2852522..2852527))
+ /locus_tag="SARI_02925"
+ /note="Ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:238847"
+ misc_feature complement(2851982..2852455)
+ /locus_tag="SARI_02925"
+ /note="Electron transfer flavoprotein domain; Region: ETF;
+ pfam01012"
+ /db_xref="CDD:216243"
+ gene 2853021..2854538
+ /locus_tag="SARI_02926"
+ CDS 2853021..2854538
+ /locus_tag="SARI_02926"
+ /inference="protein motif:BlastProDom:IPR000060"
+ /inference="protein motif:HMMPfam:IPR000060"
+ /inference="protein motif:HMMTigr:IPR000060"
+ /inference="protein motif:ScanRegExp:IPR000060"
+ /inference="similar to AA sequence:REFSEQ:NP_459079.1"
+ /note="catalyzes the exchange of L-carnitine for
+ gamma-butyrobetaine in carnitine metabolism"
+ /codon_start=1
+ /transl_table=11
+ /product="L-carnitine/gamma-butyrobetaine antiporter"
+ /protein_id="YP_001571914.1"
+ /db_xref="GI:161504802"
+ /db_xref="InterPro:IPR000060"
+ /translation="MKTDKKKSGIEPKVFFPPLIIVGILCWLTVRDLDAANNVINAVF
+ SYVTNIWGWAFEWYMVVMLIGWFWLVFGPYAKKKLGDEPPEFSTTSWIFMMFASCTSA
+ AVLFWGSIEIYYYISTPPFGLAPNSTGAKEIGLAYSLFHWGPLPWATYSFLSVAFAYF
+ FFVRKMDVIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTEC
+ MQYLFGIPHTLELDAIIITCWIILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIV
+ SGASFIMNYFTDSVGTLLMYLPRMLFYTDPIGKSGFPQSWTVFYWAWWVIYAIQMSIF
+ LARISRGRTVRELCFGMVLGLTASTWILWTVLGSNTLLLMDKNILNIPQLIDQHGVAR
+ AIIETWAALPLSTATMWGFFILCFIATVTLINACSYTLAMSTCREVRDGEEPPLLVRI
+ GWSVLVGIIGIVLLALGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKDAKTHWKDK"
+ misc_feature 2853021..2854532
+ /locus_tag="SARI_02926"
+ /note="L-carnitine/gamma-butyrobetaine antiporter;
+ Provisional; Region: PRK03356"
+ /db_xref="CDD:179568"
+ gene 2854570..2855712
+ /locus_tag="SARI_02927"
+ CDS 2854570..2855712
+ /locus_tag="SARI_02927"
+ /inference="protein motif:Gene3D:IPR006091"
+ /inference="protein motif:Gene3D:IPR013764"
+ /inference="protein motif:Gene3D:IPR013786"
+ /inference="protein motif:HMMPfam:IPR006090"
+ /inference="protein motif:HMMPfam:IPR006091"
+ /inference="protein motif:HMMPfam:IPR006092"
+ /inference="protein motif:ScanRegExp:IPR006089"
+ /inference="protein motif:superfamily:IPR009075"
+ /inference="protein motif:superfamily:IPR009100"
+ /inference="similar to AA sequence:INSD:EAY46134.1"
+ /note="catalyzes the reduction of crotonobetainyl-CoA to
+ gamma-butyrobetainyl-CoA"
+ /codon_start=1
+ /transl_table=11
+ /product="crotonobetainyl-CoA dehydrogenase"
+ /protein_id="YP_001571915.1"
+ /db_xref="GI:161504803"
+ /db_xref="InterPro:IPR006089"
+ /db_xref="InterPro:IPR006090"
+ /db_xref="InterPro:IPR006091"
+ /db_xref="InterPro:IPR006092"
+ /db_xref="InterPro:IPR009075"
+ /db_xref="InterPro:IPR009100"
+ /db_xref="InterPro:IPR013764"
+ /db_xref="InterPro:IPR013786"
+ /translation="MDFNLNDEQELFVAGIRELMASENWEAYFAECDRDSIYPERFVK
+ ALAEMGIDSLLIPEEHGGLDAGFVTVAAVWMELGRLGAPTYVLYQLPGGFNTFLREGT
+ QEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRKNGKVYLNGSKCFITSSA
+ YTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLEKLGLRMDSCCEITFDEVELD
+ EKDRFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGETIGRF
+ QLIQEKFAHMAIKLNAMKNMLLEAAWKADNGTITSGDAAMCKYFCANAAFEVVDSAMQ
+ VLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLKQYR"
+ misc_feature 2854570..2855709
+ /locus_tag="SARI_02927"
+ /note="crotonobetainyl-CoA dehydrogenase; Validated;
+ Region: PRK03354"
+ /db_xref="CDD:179566"
+ misc_feature 2854588..2855688
+ /locus_tag="SARI_02927"
+ /note="Acyl-CoA dehydrogenase; Region: ACAD; cd00567"
+ /db_xref="CDD:173838"
+ misc_feature order(2854717..2854719,2854933..2854935,2854939..2854941,
+ 2855032..2855034,2855038..2855040,2855644..2855652,
+ 2855656..2855658,2855662..2855664)
+ /locus_tag="SARI_02927"
+ /note="active site"
+ /db_xref="CDD:173838"
+ gene 2855831..2857033
+ /locus_tag="SARI_02928"
+ CDS 2855831..2857033
+ /locus_tag="SARI_02928"
+ /inference="protein motif:HMMPanther:IPR003673"
+ /inference="protein motif:HMMPfam:IPR003673"
+ /inference="similar to AA sequence:INSD:AAL19036.1"
+ /note="'catalyzes formation of L-carnitinyl-CoA by
+ transfering the CoA moiety from gamma-butyrobetainyl-CoA,
+ also catalyzes the formation of crotonobetainyl-CoA by
+ transfer of CoA from gamma-butyrobetainyl-CoA or
+ L-carnitinyl-CoA to crotonobetaine'"
+ /codon_start=1
+ /transl_table=11
+ /product="crotonobetainyl-CoA:carnitine CoA-transferase"
+ /protein_id="YP_001571916.1"
+ /db_xref="GI:161504804"
+ /db_xref="InterPro:IPR003673"
+ /translation="MPAFGPLSGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWA
+ DTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFARRGIT
+ DEVLWKHNPKLVIAHLSGFGQFGDEEYTHLPAYNTIAQAFSGYLIQNGDVDQPMPAFP
+ YTADYFSGLTATASALAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEICP
+ RMTKGKDPYYAGCGLYKCADGYIVMELVGITQINECFKDIGLAHILGTPEVPEGTQLI
+ HRIECPYGPLVEEKLDTWLATRSIADVQARFAELNIACAKVLTIPELEHHPQYVARES
+ ITQWQTMDGRTCKGPNIMPKFKNNPGKIWRAMPSHGMDTAAILKNIGYSEADIKELVG
+ KGLAKVED"
+ misc_feature 2855831..2857030
+ /locus_tag="SARI_02928"
+ /note="crotonobetainyl-CoA:carnitine CoA-transferase;
+ Provisional; Region: PRK03525"
+ /db_xref="CDD:179589"
+ misc_feature 2856020..2856559
+ /locus_tag="SARI_02928"
+ /note="CoA-transferase family III; Region: CoA_transf_3;
+ pfam02515"
+ /db_xref="CDD:217078"
+ gene 2857102..2858655
+ /gene="caiC"
+ /locus_tag="SARI_02929"
+ CDS 2857102..2858655
+ /gene="caiC"
+ /locus_tag="SARI_02929"
+ /inference="protein motif:HMMPfam:IPR000873"
+ /inference="protein motif:ScanRegExp:IPR000873"
+ /inference="similar to AA sequence:REFSEQ:NP_459076.1"
+ /note="'KEGG: stm:STM0071 2.8e-239 caiC;
+ crotonobetaine/carnitine-CoA ligase K02182;
+ COG: COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid
+ ligases II;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative crotonobetaine/carnitine-CoA ligase"
+ /protein_id="YP_001571917.1"
+ /db_xref="GI:161504805"
+ /db_xref="InterPro:IPR000873"
+ /translation="MDIVGGQHLRQMWDDLAGIYEDKTALIFESCAGEVQHFSYASLN
+ REINRTANLFYSLGIRKGDNVALHLDNCPEFIFCWFGLAKIGAIVVPINARLLREESA
+ WILQNSRTSLLVTSAPFYPMYRQIQQEGRTPLSHICLIGPTLPAEEGVSHFYTLKAQQ
+ PDVLLYTPPLTPDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSSWQCALREDDVYL
+ TVMPAFHIDCQCTAAMAAFSVGATFVLIEKYSARAFWGQVRKYCATVTECIPMMIRTL
+ MTQTPAADDRHHCLREVMFYLNLSVQEKEAFTERFGVRLFTSYGMTETIVGIIGDRPG
+ DKRRWPSIGRPGFCYEAEIRNEQNRALPPGEIGEICIKGIPGKTLFKSYFERPDATAK
+ ALEPNGWLHTGDSGYRDEEGFFYFVDRRCNMVKRGGENVSCVELENIIAGHPKIQDVV
+ VIGIKDDIRDEAIKAFVVLNEGETLTEEDFFTFCEENMAKFKVPSYLEIREDLPRNCS
+ GKIIKKNLK"
+ misc_feature 2857102..2858652
+ /gene="caiC"
+ /locus_tag="SARI_02929"
+ /note="putative crotonobetaine/carnitine-CoA ligase;
+ Validated; Region: caiC; PRK08008"
+ /db_xref="CDD:181195"
+ misc_feature 2857207..2858652
+ /gene="caiC"
+ /locus_tag="SARI_02929"
+ /note="Uncharacterized subfamily of fatty acid CoA ligase
+ (FACL); Region: FACL_DitJ_like; cd05934"
+ /db_xref="CDD:213300"
+ misc_feature order(2857591..2857593,2857600..2857602,2857645..2857659,
+ 2857663..2857668)
+ /gene="caiC"
+ /locus_tag="SARI_02929"
+ /note="acyl-activating enzyme (AAE) consensus motif; other
+ site"
+ /db_xref="CDD:213300"
+ misc_feature order(2857600..2857602,2857987..2857992,2858050..2858067,
+ 2858311..2858313,2858347..2858349,2858356..2858358,
+ 2858389..2858391,2858629..2858631)
+ /gene="caiC"
+ /locus_tag="SARI_02929"
+ /note="putative AMP binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:213300"
+ misc_feature order(2857600..2857602,2857762..2857767,2857912..2857914,
+ 2857918..2857923,2857930..2857932,2857987..2857992,
+ 2858050..2858067,2858311..2858313,2858347..2858349,
+ 2858356..2858358,2858380..2858391,2858572..2858574)
+ /gene="caiC"
+ /locus_tag="SARI_02929"
+ /note="putative active site [active]"
+ /db_xref="CDD:213300"
+ misc_feature order(2857762..2857764,2857918..2857923,2857930..2857932,
+ 2857987..2857989,2858380..2858388,2858554..2858556,
+ 2858572..2858574)
+ /gene="caiC"
+ /locus_tag="SARI_02929"
+ /note="putative CoA binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:213300"
+ gene 2858770..2859555
+ /locus_tag="SARI_02930"
+ CDS 2858770..2859555
+ /locus_tag="SARI_02930"
+ /inference="protein motif:HMMPfam:IPR001753"
+ /inference="protein motif:ScanRegExp:IPR001753"
+ /inference="similar to AA sequence:REFSEQ:YP_149417.1"
+ /note="catalyzes the dehydration of L-carnitinyl-CoA to
+ crotonobetainyl-CoA"
+ /codon_start=1
+ /transl_table=11
+ /product="carnitinyl-CoA dehydratase"
+ /protein_id="YP_001571918.1"
+ /db_xref="GI:161504806"
+ /db_xref="InterPro:IPR001753"
+ /translation="MSESLRLTRNGPILEITLDRPKANAIDARTSFAMGEAFLSFRDD
+ PHLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTELFDLNKPVIAAVN
+ GYAFGGGFELALAADFIICADHASFALPEAKLGIVPDSGGVLRLPKILPPAIVNDMVM
+ TGRRMTAEEALRWGVVNRVVSPHELLDSARELARQLVQSAPLAVAALKEITRTTRDMS
+ VEEGYRYIRSGSLRHYPAVLHSEDALEGPLAFAEKRDPEWKGH"
+ misc_feature 2858770..2859552
+ /locus_tag="SARI_02930"
+ /note="carnitinyl-CoA dehydratase; Provisional; Region:
+ PRK03580"
+ /db_xref="CDD:179599"
+ misc_feature 2858782..2859357
+ /locus_tag="SARI_02930"
+ /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
+ superfamily. This superfamily contains a diverse set of
+ enzymes including enoyl-CoA hydratase, napthoate synthase,
+ methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
+ dehydratase, and dienoyl-CoA isomerase; Region:
+ crotonase-like; cd06558"
+ /db_xref="CDD:119339"
+ misc_feature order(2858836..2858838,2858842..2858844,2858941..2858943,
+ 2858953..2858967,2859079..2859081,2859085..2859093,
+ 2859157..2859162,2859169..2859171)
+ /locus_tag="SARI_02930"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:119339"
+ misc_feature order(2858959..2858961,2859091..2859093)
+ /locus_tag="SARI_02930"
+ /note="oxyanion hole (OAH) forming residues; other site"
+ /db_xref="CDD:119339"
+ misc_feature order(2859031..2859033,2859055..2859057,2859118..2859129,
+ 2859163..2859174,2859190..2859192,2859196..2859204,
+ 2859208..2859213,2859226..2859231,2859235..2859240,
+ 2859244..2859249,2859256..2859258,2859289..2859291,
+ 2859298..2859300,2859343..2859345,2859352..2859357)
+ /locus_tag="SARI_02930"
+ /note="trimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119339"
+ gene complement(2859636..2861525)
+ /locus_tag="SARI_02931"
+ CDS complement(2859636..2861525)
+ /locus_tag="SARI_02931"
+ /inference="protein motif:HMMPfam:IPR000917"
+ /note="'KEGG: reh:H16_B0315 2.2e-136 arylsulfatase
+ K01130;
+ COG: COG3119 Arylsulfatase A and related enzymes;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571919.1"
+ /db_xref="GI:161504807"
+ /db_xref="InterPro:IPR000917"
+ /translation="MSNKKNLSTDETDLTRRKLLTSAGILTVGGMLSGAVKADEKCAV
+ KAKPAWDKPFTGEIPEKLPEGYNILLVVTDQERFFATYPFPVPGRERLMKTGVTFCNH
+ QNTSNVCTPSRSVLYTGLHMPQTKMFDNLGLPWMPYDLDPALGTTGHMMQKLGYYTAY
+ KGKWHLTEKLEKPLPDEKDEDIDVGNIPEPELHKIMEKYGFSDYHGIGDIIGHCKGGY
+ FYDSTTTAQTINWLRCKGQPLNDKNKPWFLAVNLVNPHDVMFIDTDKAGEKVQWRGEL
+ DHDDNTLAPTQPPENELYQASWLNYPLPANRHQSFNEQGRPPAHLEYQTARAALEGQF
+ PDEDRRWRKLLDYYFNCIRDCDTHLDRILNELDALKLTNKTIVVFTADHGELGGSHQM
+ HGKGASIYKEQIHVPMIISHPAYPGNKKCQALTCHLDIAPTLVGLTGLPEEKQRQALG
+ NRKGVNFSGLLKNPEGVAVNAVRNASLYCYGMILYTDAHYLHRVIALQRDKQKNVAQI
+ KQEISHLHPDFSHRSGTRMINDGRYKFARYFSLREHNTPENWQDLIKYNDLELYDLKN
+ DPDENHNLAADKEKYQDLILKMNEKLNKIIKDEIGVDDGSFMPDAASEPWDLTIEQFS
+ RMAKD"
+ misc_feature complement(2859822..2861327)
+ /locus_tag="SARI_02931"
+ /note="Arylsulfatase A and related enzymes [Inorganic ion
+ transport and metabolism]; Region: AslA; COG3119"
+ /db_xref="CDD:225661"
+ misc_feature complement(<2860203..2861327)
+ /locus_tag="SARI_02931"
+ /note="Sulfatase; Region: Sulfatase; cl17466"
+ /db_xref="CDD:248020"
+ misc_feature complement(2859699..>2859848)
+ /locus_tag="SARI_02931"
+ /note="Sulfatase; Region: Sulfatase; cl17466"
+ /db_xref="CDD:248020"
+ gene 2861821..2861916
+ /locus_tag="SARI_02932"
+ CDS 2861821..2861916
+ /locus_tag="SARI_02932"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571920.1"
+ /db_xref="GI:161504808"
+ /translation="MSLQWNFPGKHTVSNEQRNKKHTAGNIIRGN"
+ gene complement(2861824..2861928)
+ /locus_tag="SARI_02933"
+ CDS complement(2861824..2861928)
+ /locus_tag="SARI_02933"
+ /note="'Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571921.1"
+ /db_xref="GI:161504809"
+ /translation="MSCFLISPDDITGCMFFVALLVADGMFSGEIPLQ"
+ gene complement(2862434..2862574)
+ /locus_tag="SARI_02934"
+ CDS complement(2862434..2862574)
+ /locus_tag="SARI_02934"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571922.1"
+ /db_xref="GI:161504810"
+ /translation="MDNENGQLLVQTGESALNITLKQVPENYLSVKRLTACSFYWLTC
+ FR"
+ gene complement(2862523..2862969)
+ /locus_tag="SARI_02935"
+ CDS complement(2862523..2862969)
+ /locus_tag="SARI_02935"
+ /inference="similar to AA sequence:INSD:AAV76116.1"
+ /note="'COG: NOG27675 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571923.1"
+ /db_xref="GI:161504811"
+ /translation="MKMKMKMKMKMKMITLYLSALFSAASFATEINACKDLIGTWETT
+ ADNPPYTMTILPPVETCGQECVKLNVQYELDVTHRNALYCHEGLEGVKGQGPMVIAFE
+ GAYGGHAIGTYNRQLQLLWAGVIPKDKQGKWITKMDNYWFKQVKAH"
+ gene complement(2863202..2863597)
+ /locus_tag="SARI_02936"
+ CDS complement(2863202..2863597)
+ /locus_tag="SARI_02936"
+ /inference="similar to AA sequence:INSD:AAO67802.1"
+ /note="regulator of carnitine metabolism; induces the
+ caiTABCDE and fixABCX operons"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional activator CaiF"
+ /protein_id="YP_001571924.1"
+ /db_xref="GI:161504812"
+ /translation="MSKEYVEKPLYLLIADWVMAENRWVSAKEIAKQFNMDHCKAINT
+ VSYILSEVGEINCETKTIPNQLEGRGCQCQRLVRIKSIDSQLYARIGNSAREKMAGAG
+ KTPHMTTVPPTELNREQKWQMMLSKSMRR"
+ misc_feature complement(2863205..2863543)
+ /locus_tag="SARI_02936"
+ /note="DNA-binding transcriptional activator CaiF;
+ Provisional; Region: PRK11476"
+ /db_xref="CDD:183154"
+ gene complement(2863880..2867104)
+ /gene="carB"
+ /locus_tag="SARI_02937"
+ CDS complement(2863880..2867104)
+ /gene="carB"
+ /locus_tag="SARI_02937"
+ /inference="protein motif:Gene3D:IPR013816"
+ /inference="protein motif:Gene3D:IPR013817"
+ /inference="protein motif:HMMPfam:IPR005479"
+ /inference="protein motif:HMMPfam:IPR005480"
+ /inference="protein motif:HMMPfam:IPR005481"
+ /inference="protein motif:HMMPfam:IPR011607"
+ /inference="protein motif:HMMTigr:IPR006275"
+ /inference="protein motif:ScanRegExp:IPR005479"
+ /note="four CarB-CarA dimers form the carbamoyl phosphate
+ synthetase holoenzyme that catalyzes the production of
+ carbamoyl phosphate; CarB is responsible for the
+ amidotransferase activity"
+ /codon_start=1
+ /transl_table=11
+ /product="carbamoyl phosphate synthase large subunit"
+ /protein_id="YP_001571925.1"
+ /db_xref="GI:161504813"
+ /db_xref="InterPro:IPR005479"
+ /db_xref="InterPro:IPR005480"
+ /db_xref="InterPro:IPR005481"
+ /db_xref="InterPro:IPR006275"
+ /db_xref="InterPro:IPR011607"
+ /db_xref="InterPro:IPR013816"
+ /db_xref="InterPro:IPR013817"
+ /translation="MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRV
+ ILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALEL
+ ERQGVLKAFGVTMIGATADAIDKAEDRRRFDIAMKKIGLETARSGIAHTMEEALAVAA
+ DVGYPCIIRPSFTMGGTGGGIAYNREEFEEICARGLDLSPTNELLIDESLIGWKEYEM
+ EVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIG
+ VETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDE
+ LMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQ
+ ESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGAERIWYIADAFRAGLSVD
+ GVFNLTNIDRWFLVQIEELVRLEEKVAEVGINGLDADFLRHLKRKGFADARLAKLAGV
+ REAEIRKLRDQFDLHPVYKRVDTCAAEFATDTAYMYSTYEDECESNPSVDRDKIMVLG
+ GGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLE
+ DVLEIVRIEKPKGVIVQYGGQTPLKLARALEDAGVPVIGTSPDAIDRAEDRERFQHAV
+ DRLKLKQPANATVTAIEQAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQT
+ AVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPA
+ YTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKDNEVYLIEVNPRAARTVPFVSKA
+ TGVPLAKVAARVMAGKTLTAQGITKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRST
+ GEVMGVGRTFAEAFAKAQLGSNSTMKKSGRALLSVREGDKERVVDLAAKLLKQGFELD
+ ATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTAGRRAIEDSRVIR
+ RSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIQK"
+ misc_feature complement(2863898..2867104)
+ /gene="carB"
+ /locus_tag="SARI_02937"
+ /note="carbamoyl phosphate synthase large subunit;
+ Reviewed; Region: carB; PRK05294"
+ /db_xref="CDD:235393"
+ misc_feature complement(2866739..2867086)
+ /gene="carB"
+ /locus_tag="SARI_02937"
+ /note="Carbamoyl-phosphate synthase L chain, N-terminal
+ domain; Region: CPSase_L_chain; pfam00289"
+ /db_xref="CDD:201133"
+ misc_feature complement(2866100..2866723)
+ /gene="carB"
+ /locus_tag="SARI_02937"
+ /note="Carbamoyl-phosphate synthase L chain, ATP binding
+ domain; Region: CPSase_L_D2; pfam02786"
+ /db_xref="CDD:190425"
+ misc_feature complement(2865464..2865835)
+ /gene="carB"
+ /locus_tag="SARI_02937"
+ /note="Carbamoyl-phosphate synthetase large chain,
+ oligomerisation domain; Region: CPSase_L_D3; pfam02787"
+ /db_xref="CDD:217231"
+ misc_feature complement(2865101..2865427)
+ /gene="carB"
+ /locus_tag="SARI_02937"
+ /note="Carbamoyl-phosphate synthase L chain, N-terminal
+ domain; Region: CPSase_L_chain; pfam00289"
+ /db_xref="CDD:201133"
+ misc_feature complement(2864483..2865085)
+ /gene="carB"
+ /locus_tag="SARI_02937"
+ /note="ATP-grasp domain; Region: ATP-grasp_4; cl17255"
+ /db_xref="CDD:247809"
+ misc_feature complement(2863949..2864278)
+ /gene="carB"
+ /locus_tag="SARI_02937"
+ /note="Methylglyoxal synthase-like domain from type II
+ glutamine-dependent carbamoyl phosphate synthetase (CSP).
+ CSP, a CarA and CarB heterodimer, catalyzes the production
+ of carbamoyl phosphate which is subsequently employed in
+ the metabolic pathways...; Region: MGS_CPS_II; cd01424"
+ /db_xref="CDD:238712"
+ misc_feature complement(order(2864054..2864062,2864126..2864128,
+ 2864174..2864179,2864183..2864185,2864243..2864245,
+ 2864261..2864263))
+ /gene="carB"
+ /locus_tag="SARI_02937"
+ /note="IMP binding site; other site"
+ /db_xref="CDD:238712"
+ misc_feature complement(order(2864093..2864095,2864129..2864131,
+ 2864135..2864140,2864144..2864146,2864168..2864170,
+ 2864180..2864182))
+ /gene="carB"
+ /locus_tag="SARI_02937"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238712"
+ misc_feature complement(order(2863958..2863960,2863970..2863972,
+ 2863985..2863987))
+ /gene="carB"
+ /locus_tag="SARI_02937"
+ /note="interdomain contacts; other site"
+ /db_xref="CDD:238712"
+ misc_feature complement(2863979..2863987)
+ /gene="carB"
+ /locus_tag="SARI_02937"
+ /note="partial ornithine binding site; other site"
+ /db_xref="CDD:238712"
+ gene complement(2867122..2868297)
+ /locus_tag="SARI_02938"
+ CDS complement(2867122..2868297)
+ /locus_tag="SARI_02938"
+ /inference="protein motif:HMMPfam:IPR000991"
+ /inference="protein motif:HMMPfam:IPR002474"
+ /inference="protein motif:HMMTigr:IPR006274"
+ /inference="protein motif:ScanRegExp:IPR012998"
+ /inference="protein motif:superfamily:IPR002474"
+ /inference="similar to AA sequence:REFSEQ:ZP_00923581.1"
+ /note="catalyzes production of carbamoyl phosphate from
+ bicarbonate and glutamine in pyrimidine and arginine
+ biosynthesis pathways; forms an octamer composed of four
+ CarAB dimers"
+ /codon_start=1
+ /transl_table=11
+ /product="carbamoyl phosphate synthase small subunit"
+ /protein_id="YP_001571926.1"
+ /db_xref="GI:161504814"
+ /db_xref="InterPro:IPR000991"
+ /db_xref="InterPro:IPR002474"
+ /db_xref="InterPro:IPR006274"
+ /db_xref="InterPro:IPR012998"
+ /translation="MSEYSLEGVLIKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTS
+ MTGYQEILTDPSYSRQIVTLTYPHIGNVGTNEADEESSQVHAQGLVIRDLPLIASNFR
+ NTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAKLALEKAKAFP
+ GLNGMDLAKEVTTAEAYRWTQASWTLKDGLPEAKSEDDLPFHVVAYDFGAKRNILRML
+ VDRGCRLTVVPAQTSADEVLKMNPDGIFLSNGPGDPAPCDYAIHAIQKFLETEIPLFG
+ ICLGHQLLALASGAKTVKMKFGHHGGNHPVKDMDRNVVMITAQNHGFAVDEATLPANL
+ RVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIAQYRKIAK"
+ misc_feature complement(2867149..2868264)
+ /locus_tag="SARI_02938"
+ /note="carbamoyl phosphate synthase small subunit;
+ Reviewed; Region: PRK12564"
+ /db_xref="CDD:237139"
+ misc_feature complement(2867875..2868264)
+ /locus_tag="SARI_02938"
+ /note="Carbamoyl-phosphate synthase small chain, CPSase
+ domain; Region: CPSase_sm_chain; smart01097"
+ /db_xref="CDD:198165"
+ misc_feature complement(2867158..2867691)
+ /locus_tag="SARI_02938"
+ /note="Small chain of the glutamine-dependent form of
+ carbamoyl phosphate synthase, CPSase II; Region:
+ GATase1_CPSase; cd01744"
+ /db_xref="CDD:153215"
+ misc_feature complement(order(2867206..2867208,2867212..2867214,
+ 2867464..2867466))
+ /locus_tag="SARI_02938"
+ /note="catalytic site [active]"
+ /db_xref="CDD:153215"
+ misc_feature complement(order(2867185..2867190,2867194..2867199,
+ 2867275..2867277,2867356..2867358,2867362..2867364,
+ 2867383..2867385,2867389..2867391))
+ /locus_tag="SARI_02938"
+ /note="subunit interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:153215"
+ gene 2868328..2868483
+ /locus_tag="SARI_02939"
+ CDS 2868328..2868483
+ /locus_tag="SARI_02939"
+ /inference="similar to AA sequence:REFSEQ:YP_215046.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571927.1"
+ /db_xref="GI:161504815"
+ /translation="MKQCKFAYPWISGKRRHSEVKPDKSQLKEGVFYVILYIIRKLFG
+ LTGKKIN"
+ gene 2868484..2868669
+ /locus_tag="SARI_02940"
+ CDS 2868484..2868669
+ /locus_tag="SARI_02940"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571928.1"
+ /db_xref="GI:161504816"
+ /translation="MTIENAFSSLSSQKIVWHDKKWTKWSNFTLNQQKTTTKINLIAL
+ ISNKLIKKQNQSSLCEK"
+ gene 2868995..2869732
+ /locus_tag="SARI_02941"
+ CDS 2868995..2869732
+ /locus_tag="SARI_02941"
+ /inference="protein motif:HMMPfam:IPR003305"
+ /inference="protein motif:superfamily:IPR008979"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571929.1"
+ /db_xref="GI:161504817"
+ /db_xref="InterPro:IPR003305"
+ /db_xref="InterPro:IPR008979"
+ /translation="MSTESNIIIDGGFEEGFDGWVLSSQSSIFVEDGATGNNHFCRIE
+ PTNTITQYFTIEPETTYRLTLAVRGEAKGNVTISQTYPTHTSFISDINANLNAEWHRE
+ EYVFTTGADTGRTAFRISVPWNSANTPMDIDLISLVEVPFEYSKPLWVNMTNVSSSSN
+ FFQLNVMTRTDAPEGQINRIYRNGNYVTQMDAVGPDDFNQTGGYSSFAAGDVFQFRAY
+ NSLTGKEYLLCETTYEQLTASGVFNIE"
+ gene 2869795..2870520
+ /locus_tag="SARI_02942"
+ CDS 2869795..2870520
+ /locus_tag="SARI_02942"
+ /inference="protein motif:HMMPfam:IPR003305"
+ /inference="protein motif:superfamily:IPR008979"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571930.1"
+ /db_xref="GI:161504818"
+ /db_xref="InterPro:IPR003305"
+ /db_xref="InterPro:IPR008979"
+ /translation="MAEINNIIIDGSFEDGLTEQWQIGSLVEVEENDSNHFCRIDSAN
+ ALSQTVTLETFMTYAISFLITGNLVGKIIVQTTDRTTTFFEHDINMTTQDEWHTESLE
+ FSTQAVAGEAVVSFIAPGEIGAGSLFIDNINMVAVPFVFTRPLWVNMDRASSNYVYYQ
+ YGIMTTADAATQTYRLYKNEGFLAEYSIGADDFVQSTTMNTVVATDVFKLTILNTKTT
+ AEHVVSEETVETLMAKGVIYLTE"
+ gene complement(2870616..2871437)
+ /locus_tag="SARI_02943"
+ CDS complement(2870616..2871437)
+ /locus_tag="SARI_02943"
+ /inference="protein motif:BlastProDom:IPR000846"
+ /inference="protein motif:HMMPfam:IPR000846"
+ /inference="protein motif:HMMPIR:IPR011770"
+ /inference="protein motif:HMMTigr:IPR011770"
+ /inference="protein motif:ScanRegExp:IPR000846"
+ /inference="similar to AA sequence:REFSEQ:NP_454675.1"
+ /note="'catalyzes the reduction of 2,3-dihydrodipicolinate
+ to 2,3,4,5-tetrahydrodipicolinate in lysine and
+ diaminopimelate biosynthesis'"
+ /codon_start=1
+ /transl_table=11
+ /product="dihydrodipicolinate reductase"
+ /protein_id="YP_001571931.1"
+ /db_xref="GI:161504819"
+ /db_xref="InterPro:IPR000846"
+ /db_xref="InterPro:IPR011770"
+ /translation="MHEAQIRVAIVGAGGRMGRQLIQAALHMEGIQPGAALEREGSSL
+ LGSDAGELAGVGKMGVIVQSDLALVKDDFDVLVDFTRPEGTLAHLAFCRKHGKSMVIG
+ TTGFDEAGKQAIRDAAQEIAIVFAANFSVGVNVMLKLLEKTAKVMGDYSDIEIIEAHH
+ RHKVDAPSGTALAMGETIAHALNKDLQDCAVYSREGHTGERVPGTIGFATVRAGDIIG
+ EHTAMFADIGERVEITHKASSRMTFANGALRSALWLKTKKNGLFDMRDVLGLDVL"
+ misc_feature complement(2870628..2871422)
+ /locus_tag="SARI_02943"
+ /note="Dihydrodipicolinate reductase [Amino acid transport
+ and metabolism]; Region: DapB; COG0289"
+ /db_xref="CDD:223366"
+ misc_feature complement(2871051..2871422)
+ /locus_tag="SARI_02943"
+ /note="Dihydrodipicolinate reductase, N-terminus; Region:
+ DapB_N; pfam01113"
+ /db_xref="CDD:216304"
+ misc_feature complement(2870634..2871044)
+ /locus_tag="SARI_02943"
+ /note="Dihydrodipicolinate reductase, C-terminus; Region:
+ DapB_C; pfam05173"
+ /db_xref="CDD:218479"
+ gene complement(2871614..2872567)
+ /locus_tag="SARI_02944"
+ CDS complement(2871614..2872567)
+ /locus_tag="SARI_02944"
+ /inference="protein motif:BlastProDom:IPR001910"
+ /inference="protein motif:Gene3D:IPR001910"
+ /inference="protein motif:HMMPfam:IPR001910"
+ /inference="protein motif:superfamily:IPR001910"
+ /inference="similar to AA sequence:SwissProt:Q5PKI2"
+ /note="catalyzes the hydrolysis of both purine and
+ pyrimidine ribonucleosides"
+ /codon_start=1
+ /transl_table=11
+ /product="ribonucleoside hydrolase RihC"
+ /protein_id="YP_001571932.1"
+ /db_xref="GI:161504820"
+ /db_xref="InterPro:IPR001910"
+ /translation="MPDTLSGIFYGADMRLPIILDTDPGIDDAAAITAALFTPELDLQ
+ LITTVAGNVSVEKTTRNALQLLHFWNSDIPLAQGAATPLLRPLRDAAYVHGESGMGGY
+ DFVDHQRQPLAKPAFIAIRDALMNAPEPMTLVAIGPLTNIALLLMHYPECAFNIRRLV
+ MMGGSAGRGNFTPNAEFNIAVDPEAAAHVFRSGIEIVMCGLDVTNQAMLSPDFLDKLP
+ ALNRTGKMLHGLFNHYRSGSRRTGVRMHDLCAIAWLTRPELFILKPCFVAVETQGEYT
+ AGTTVVDIEGRLERPVNVQVALDIDVAGFQQWAADALALAP"
+ misc_feature complement(2871629..2872519)
+ /locus_tag="SARI_02944"
+ /note="nuc_hydro_IU_UC_XIUA: inosine-uridine preferring,
+ xanthosine-inosine-uridine-adenosine-preferring and,
+ uridine-cytidine preferring nucleoside hydrolases.
+ Nucleoside hydrolases cleave the N-glycosidic bond in
+ nucleosides generating ribose and the...; Region:
+ nuc_hydro_IU_UC_XIUA; cd02651"
+ /db_xref="CDD:239117"
+ misc_feature complement(order(2871827..2871829,2872034..2872036,
+ 2872040..2872042,2872058..2872060,2872160..2872162,
+ 2872289..2872291,2872412..2872414,2872484..2872489,
+ 2872499..2872501))
+ /locus_tag="SARI_02944"
+ /note="active site"
+ /db_xref="CDD:239117"
+ misc_feature complement(order(2871740..2871742,2871749..2871754,
+ 2871758..2871760,2872004..2872006,2872127..2872129,
+ 2872319..2872321))
+ /locus_tag="SARI_02944"
+ /note="tetramer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:239117"
+ gene complement(2872594..2873544)
+ /gene="ispH"
+ /locus_tag="SARI_02945"
+ CDS complement(2872594..2873544)
+ /gene="ispH"
+ /locus_tag="SARI_02945"
+ /inference="protein motif:HMMPfam:IPR003451"
+ /inference="protein motif:HMMTigr:IPR003451"
+ /inference="similar to AA sequence:REFSEQ:NP_459054.1"
+ /note="catalyzes the conversion of
+ 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into
+ isopentenyl diphosphate (IPP) and dimethylallyl
+ diphosphate (DMAPP); functions in the nonmevalonate
+ isoprenoid biosynthesis pathway"
+ /codon_start=1
+ /transl_table=11
+ /product="4-hydroxy-3-methylbut-2-enyl diphosphate
+ reductase"
+ /protein_id="YP_001571933.1"
+ /db_xref="GI:161504821"
+ /db_xref="InterPro:IPR003451"
+ /translation="MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRY
+ VVDSLRKRGAIFIEQISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKV
+ HMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPEDVWTLNVKNEDK
+ LSFMTQTTLSVDDTSDVIDALRSRFPKIVGPRKDDICYATTNRQEAVRALAEQADVVL
+ VVGSKNSSNSNRLAELAQRMGRRAFLIDDAADIQEAWVKEAVCVGVTAGASAPDILVQ
+ NVIARLREFGGGEAVTLEGREENIVFEVPKELRVDVREVE"
+ misc_feature complement(2872642..2873544)
+ /gene="ispH"
+ /locus_tag="SARI_02945"
+ /note="4-hydroxy-3-methylbut-2-enyl diphosphate reductase;
+ Reviewed; Region: ispH; PRK01045"
+ /db_xref="CDD:234893"
+ misc_feature complement(2872660..2873544)
+ /gene="ispH"
+ /locus_tag="SARI_02945"
+ /note="4-Hydroxy-3-methylbut-2-enyl diphosphate reductase
+ IspH [Lipid metabolism]; Region: lytB; COG0761"
+ /db_xref="CDD:223832"
+ gene complement(2873547..2873996)
+ /locus_tag="SARI_02946"
+ CDS complement(2873547..2873996)
+ /locus_tag="SARI_02946"
+ /inference="protein motif:HMMPfam:IPR001179"
+ /inference="similar to AA sequence:INSD:AAL19012.1"
+ /note="'KEGG: sec:SC0042 9.2e-74 slpA; FKBP-type
+ peptidyl-prolyl cis-trans isomerase (rotamase) K03774;
+ COG: COG1047 FKBP-type peptidyl-prolyl cis-trans
+ isomerases 2;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571934.1"
+ /db_xref="GI:161504822"
+ /db_xref="InterPro:IPR001179"
+ /translation="MSKSVQSNSAILVHFTLKLDDGSTAESTRNNGKPALFRLGDTSL
+ SEGLEQQLLGLKEGEKKAFLLEPDAAFGVPSPDLIQYFSRREFMTAGEPEVGAIMLFT
+ AMDGSEMPGVIREINGDSITVDFNHPLAGHTVHFDIEVLEIDPALEA"
+ misc_feature complement(2873550..2873996)
+ /locus_tag="SARI_02946"
+ /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
+ Provisional; Region: PRK15095"
+ /db_xref="CDD:237908"
+ misc_feature complement(<2873874..2873990)
+ /locus_tag="SARI_02946"
+ /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
+ Region: FKBP_C; pfam00254"
+ /db_xref="CDD:215821"
+ gene complement(2874115..2874615)
+ /gene="lspA"
+ /locus_tag="SARI_02947"
+ CDS complement(2874115..2874615)
+ /gene="lspA"
+ /locus_tag="SARI_02947"
+ /inference="protein motif:BlastProDom:IPR001872"
+ /inference="protein motif:HMMPfam:IPR001872"
+ /inference="protein motif:HMMTigr:IPR001872"
+ /inference="protein motif:ScanRegExp:IPR001872"
+ /inference="similar to AA sequence:REFSEQ:YP_149395.1"
+ /note="lipoprotein signal peptidase; integral membrane
+ protein that removes signal peptides from prolipoproteins
+ during lipoprotein biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="lipoprotein signal peptidase"
+ /protein_id="YP_001571935.1"
+ /db_xref="GI:161504823"
+ /db_xref="InterPro:IPR001872"
+ /translation="MSKPLCSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVGLFP
+ SLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGICVILVAMMYRSKATQKLNNIAYA
+ LIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADSAICIGAALIVLEGFLPKP
+ AAKEQA"
+ misc_feature complement(2874139..2874612)
+ /gene="lspA"
+ /locus_tag="SARI_02947"
+ /note="lipoprotein signal peptidase; Reviewed; Region:
+ lspA; PRK00376"
+ /db_xref="CDD:234739"
+ gene complement(2874615..2877485)
+ /gene="ileS"
+ /locus_tag="SARI_02948"
+ CDS complement(2874615..2877485)
+ /gene="ileS"
+ /locus_tag="SARI_02948"
+ /inference="protein motif:FPrintScan:IPR002301"
+ /inference="protein motif:HMMPfam:IPR002300"
+ /inference="protein motif:HMMPfam:IPR010663"
+ /inference="protein motif:HMMPfam:IPR013155"
+ /inference="protein motif:HMMTigr:IPR002301"
+ /inference="protein motif:ScanRegExp:IPR001412"
+ /inference="protein motif:superfamily:IPR009008"
+ /inference="protein motif:superfamily:IPR009080"
+ /note="'IleRS; catalyzes the formation of
+ isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since
+ isoleucine and other amino acids such as valine are
+ similar, there are additional editing function in this
+ enzyme; one is involved in hydrolysis of activated
+ valine-AMP and the other is involved in deacylation of
+ mischarged Val-tRNA(Ile); there are two active sites, one
+ for aminoacylation and one for editing; class-I
+ aminoacyl-tRNA synthetase family type 1 subfamily; some
+ organisms carry two different copies of this enzyme'"
+ /codon_start=1
+ /transl_table=11
+ /product="isoleucyl-tRNA synthetase"
+ /protein_id="YP_001571936.1"
+ /db_xref="GI:161504824"
+ /db_xref="InterPro:IPR001412"
+ /db_xref="InterPro:IPR002300"
+ /db_xref="InterPro:IPR002301"
+ /db_xref="InterPro:IPR009008"
+ /db_xref="InterPro:IPR009080"
+ /db_xref="InterPro:IPR010663"
+ /db_xref="InterPro:IPR013155"
+ /translation="MFIKPKYGTENLMSDYKSTLNLPETGFPMRGDLAKREPGMLARW
+ TDDDLYGIIRAAKKGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGFDSP
+ YVPGWDCHGLPIELKVEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLG
+ DWSHPYLTMDFKTEANIIRALGKIISNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKT
+ SPSIDVAFRAVDQDAVKAKFGLPGVSGPISLVIWTTTPWTLPANRAISLAPDFDYALV
+ QVDGQALILAKDLVESVMQRIGAADYTLLGTVKGAELELLRFTHPFMSFDVPAILGDH
+ VTLDAGTGAVHTAPGHGPDDYVIGQKYGLETANPVGPDGAYLPGTYPTLDGVNVFKAN
+ DIVIELLKEKGVLLHVEKMQHSYPCCWRHKTPIIFRATPQWFVSMDKEGLRQQSLKEI
+ NGVQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKETQELLPIERTLAAME
+ EVAKRVEVDGIQAWWDLDPKEILGEDADQYEKVPDTLDVWFDSGSTSYSVVDARPEFA
+ GHAADMYLEGSDQHRGWFMSSLMISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNT
+ VSPQDVMNKLGADILRLWVASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNG
+ FNPATDMVKPEEMVVLDRWAVGCAKTAQEEILKAYEAYDFHEVVQRLMRFCSVEMGSF
+ YLDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPIMSFTADEIWGYLPGEREK
+ YVFTGEWYDGLFGLEENEEFNDAFWDDVRYIKDQVNKELENQKANGIKSNLEAKVTLK
+ YADDANGTIKKLKLLGEEVRFIFITSQFVISEQPGGIDDENIQYNAGNTTVQAVVTRA
+ EGDKCPRCWHYTTDVGKVAEHADICGRCVSNIAGNGEQRKFA"
+ misc_feature complement(2874642..2877449)
+ /gene="ileS"
+ /locus_tag="SARI_02948"
+ /note="isoleucyl-tRNA synthetase; Reviewed; Region: ileS;
+ PRK05743"
+ /db_xref="CDD:235588"
+ misc_feature complement(<2876889..2877305)
+ /gene="ileS"
+ /locus_tag="SARI_02948"
+ /note="catalytic core domain of isoleucyl-tRNA
+ synthetases; Region: IleRS_core; cd00818"
+ /db_xref="CDD:173909"
+ misc_feature complement(2877246..2877257)
+ /gene="ileS"
+ /locus_tag="SARI_02948"
+ /note="HIGH motif; other site"
+ /db_xref="CDD:173909"
+ misc_feature complement(2875524..>2876216)
+ /gene="ileS"
+ /locus_tag="SARI_02948"
+ /note="catalytic core domain of isoleucyl-tRNA
+ synthetases; Region: IleRS_core; cd00818"
+ /db_xref="CDD:173909"
+ misc_feature complement(order(2875533..2875535,2875629..2875646,
+ 2875656..2875670,2875737..2875739,2875743..2875745,
+ 2875749..2875763,2875833..2875835,2875842..2875844,
+ 2876097..2876099))
+ /gene="ileS"
+ /locus_tag="SARI_02948"
+ /note="active site"
+ /db_xref="CDD:173909"
+ misc_feature complement(2875626..2875640)
+ /gene="ileS"
+ /locus_tag="SARI_02948"
+ /note="KMSKS motif; other site"
+ /db_xref="CDD:173909"
+ misc_feature complement(2874984..2875526)
+ /gene="ileS"
+ /locus_tag="SARI_02948"
+ /note="Anticodon-binding domain of bacterial and
+ eukaryotic mitochondrial isoleucyl tRNA synthetases;
+ Region: Anticodon_Ia_Ile_BEm; cd07960"
+ /db_xref="CDD:153414"
+ misc_feature complement(order(2874984..2874986,2874993..2874995,
+ 2875248..2875250,2875257..2875259,2875269..2875271,
+ 2875284..2875286,2875293..2875298,2875305..2875310,
+ 2875317..2875319,2875461..2875466,2875473..2875475,
+ 2875482..2875484,2875494..2875496,2875503..2875505,
+ 2875515..2875517))
+ /gene="ileS"
+ /locus_tag="SARI_02948"
+ /note="tRNA binding surface [nucleotide binding]; other
+ site"
+ /db_xref="CDD:153414"
+ misc_feature complement(order(2875464..2875466,2875473..2875475))
+ /gene="ileS"
+ /locus_tag="SARI_02948"
+ /note="anticodon binding site; other site"
+ /db_xref="CDD:153414"
+ misc_feature complement(2874651..2874740)
+ /gene="ileS"
+ /locus_tag="SARI_02948"
+ /note="Zinc finger found in FPG and IleRS; Region:
+ zf-FPG_IleRS; pfam06827"
+ /db_xref="CDD:203527"
+ gene complement(2877494..2878432)
+ /locus_tag="SARI_02949"
+ CDS complement(2877494..2878432)
+ /locus_tag="SARI_02949"
+ /inference="protein motif:BlastProDom:IPR002606"
+ /inference="protein motif:HMMPfam:IPR002606"
+ /inference="protein motif:HMMTigr:IPR002606"
+ /inference="similar to AA sequence:INSD:AAO67780.1"
+ /note="catalyzes the formation of FMN from riboflavin and
+ the formation of FAD from FMN; in Bacillus the ribC gene
+ has both flavokinase and FAD synthetase activities"
+ /codon_start=1
+ /transl_table=11
+ /product="bifunctional riboflavin kinase/FMN
+ adenylyltransferase"
+ /protein_id="YP_001571937.1"
+ /db_xref="GI:161504825"
+ /db_xref="InterPro:IPR002606"
+ /translation="MKLIRGIHNLSQAPHGCVLTIGNFDGVHRGHRALLQGLQEEGRR
+ RGLPVVVMIFEPQPLELFATDKAPARLTRLREKLHYLAQCGVDYVLCVKFDRRFAALT
+ AQTFISELLVARLGVQFLAVGDDFRFGASRAGDFLLLQTAGAEYGFAVSSTQTFCEGG
+ MRISSTAVRQALAEDNLALAESLLGHPFTISGRVVHGDELGRTIGFPTANLPLRRQVS
+ PVKGVYAVEVTGLGDKPLPGVANIGTRPTVAGVRQQLEVHLLDVVMDLYGRHIDVILR
+ KKIRNEQRFASLDELKAQIARDELTARKFFGLAGQV"
+ misc_feature complement(2877509..2878429)
+ /locus_tag="SARI_02949"
+ /note="bifunctional riboflavin kinase/FMN
+ adenylyltransferase; Reviewed; Region: PRK05627"
+ /db_xref="CDD:235536"
+ misc_feature complement(2877842..2878384)
+ /locus_tag="SARI_02949"
+ /note="FAD synthetase, N-terminal domain of the
+ bifunctional enzyme; Region: FAD_synthetase_N; cd02064"
+ /db_xref="CDD:185679"
+ misc_feature complement(order(2877938..2877946,2877968..2877970,
+ 2878058..2878060,2878340..2878342,2878349..2878351,
+ 2878358..2878369))
+ /locus_tag="SARI_02949"
+ /note="active site"
+ /db_xref="CDD:185679"
+ misc_feature complement(2877515..2877886)
+ /locus_tag="SARI_02949"
+ /note="Riboflavin kinase; Region: Flavokinase; smart00904"
+ /db_xref="CDD:214901"
+ gene 2878761..2879024
+ /gene="rpsT"
+ /locus_tag="SARI_02950"
+ CDS 2878761..2879024
+ /gene="rpsT"
+ /locus_tag="SARI_02950"
+ /inference="protein motif:BlastProDom:IPR002583"
+ /inference="protein motif:Gene3D:IPR002583"
+ /inference="protein motif:HMMPfam:IPR002583"
+ /inference="protein motif:HMMTigr:IPR002583"
+ /inference="protein motif:superfamily:IPR002583"
+ /inference="similar to AA sequence:INSD:AAV76079.1"
+ /note="binds directly to the 16S rRNA and is involved in
+ post-translational inhibition of arginine and ornithine
+ decarboxylase"
+ /codon_start=1
+ /transl_table=11
+ /product="30S ribosomal protein S20"
+ /protein_id="YP_001571938.1"
+ /db_xref="GI:161504826"
+ /db_xref="InterPro:IPR002583"
+ /translation="MANIKSAKKRAVQSEKARKHNASRRSMMRTFIKKVYAAIEAGDK
+ AAALKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA"
+ misc_feature 2878761..2879021
+ /gene="rpsT"
+ /locus_tag="SARI_02950"
+ /note="30S ribosomal protein S20; Reviewed; Region: rpsT;
+ PRK00239"
+ /db_xref="CDD:178943"
+ gene complement(2879152..2880057)
+ /gene="nhaR"
+ /locus_tag="SARI_02951"
+ CDS complement(2879152..2880057)
+ /gene="nhaR"
+ /locus_tag="SARI_02951"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="similar to AA sequence:INSD:AAX63941.1"
+ /note="Na+/H+ antiporter regulatory protein; activates the
+ genes nhaA and osmC"
+ /codon_start=1
+ /transl_table=11
+ /product="transcriptional activator NhaR"
+ /protein_id="YP_001571939.1"
+ /db_xref="GI:161504827"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR011991"
+ /translation="MSVSHINYNHLYYFWNVYKEGSVVGAAEALFLTPQTITGQIKAL
+ EERLQGKLFKRKGRGLEPSELGELVFRYADKMFTLSQEMLDIVNYRKESNLLFDVGVA
+ DALSKRLVSSVLDAAVVVDEPIHLRCFESTHEMLLEQLSQHKLDMIISDCPIDSTQQE
+ GLFSVKIGECSVSFWCTNPLPEKVFPACLEERRLLVPGRRSMLGRKLLNWFNSQGLQV
+ EILGEFDDAALMKAFGATHNAIFVAPSLYSLDFYADESVIEIGRVENVMEEYHAIFAE
+ RMIQHPAVQRICNADYSTLFTPVSR"
+ misc_feature complement(2879164..2880051)
+ /gene="nhaR"
+ /locus_tag="SARI_02951"
+ /note="transcriptional activator NhaR; Provisional;
+ Region: nhaR; PRK11062"
+ /db_xref="CDD:182938"
+ misc_feature complement(2879857..2880033)
+ /gene="nhaR"
+ /locus_tag="SARI_02951"
+ /note="Bacterial regulatory helix-turn-helix protein, lysR
+ family; Region: HTH_1; pfam00126"
+ /db_xref="CDD:215735"
+ misc_feature complement(2879170..2879772)
+ /gene="nhaR"
+ /locus_tag="SARI_02951"
+ /note="The C-terminal substrate binding domain of
+ LysR-type transcriptional activator of the nhaA gene,
+ encoding Na+/H+ antiporter, contains the type 2
+ periplasmic binding fold; Region: PBP2_NhaR; cd08429"
+ /db_xref="CDD:176120"
+ misc_feature complement(order(2879350..2879355,2879359..2879364,
+ 2879380..2879397,2879668..2879688,2879692..2879694,
+ 2879704..2879706,2879713..2879718,2879722..2879727))
+ /gene="nhaR"
+ /locus_tag="SARI_02951"
+ /note="putative dimerization interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:176120"
+ gene complement(2880119..2881285)
+ /gene="nhaA"
+ /locus_tag="SARI_02952"
+ CDS complement(2880119..2881285)
+ /gene="nhaA"
+ /locus_tag="SARI_02952"
+ /inference="protein motif:HMMPfam:IPR004670"
+ /inference="protein motif:HMMTigr:IPR004670"
+ /inference="similar to AA sequence:REFSEQ:YP_215021.1"
+ /note="exports sodium by using the electrochemical proton
+ gradient to allow protons into the cell; functions in
+ adaptation to high salinity and alkaline pH; activity
+ increases at higher pH; downregulated at acidic pH"
+ /codon_start=1
+ /transl_table=11
+ /product="pH-dependent sodium/proton antiporter"
+ /protein_id="YP_001571940.1"
+ /db_xref="GI:161504828"
+ /db_xref="InterPro:IPR004670"
+ /translation="MKHLQRFFSSDASGGIILIIAAALAMLMANMGATSGWYHHFLET
+ PVQLRVGALEINKNMLLWINDALMAVFFLLIGLEVKRELLQGSLASLRQAVFPVIAAI
+ GGMIVPALLYLAFNYSDPVTREGWAIPAATDIAFALGVLALLGSRVPLALKIFLMALA
+ IIDDLGAIIIIALFYTSDLSIVSLGVAAFAIVVLALLNLCGVRRTGVYILVGAILWTA
+ VLKSGVHATLAGVIVGFFIPLKEKHGRSPAKRLEHILHPWVAYLILPLFAFANAGVSL
+ QGVTIDGLTSMLPLGIIAGLLIGKPLGISLFCWLALRFKLAHLPQGTTYQQIMAVGIL
+ CGIGFTMSIFIASLAFGNVDPALINWAKLGILIGSLLSAVVGYSWLRARLNAPA"
+ misc_feature complement(2880128..2881285)
+ /gene="nhaA"
+ /locus_tag="SARI_02952"
+ /note="pH-dependent sodium/proton antiporter; Reviewed;
+ Region: nhaA; PRK09561"
+ /db_xref="CDD:181955"
+ gene complement(2881448..2883190)
+ /locus_tag="SARI_02953"
+ CDS complement(2881448..2883190)
+ /locus_tag="SARI_02953"
+ /inference="protein motif:HMMPfam:IPR010262"
+ /inference="similar to AA sequence:INSD:AAL19002.1"
+ /note="'KEGG: lpl:lp_1381 3.0e-26 astA; arylsulfate
+ sulfotransferase K01023;
+ COG: NOG14107 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571941.1"
+ /db_xref="GI:161504829"
+ /db_xref="InterPro:IPR010262"
+ /translation="MKLIHWRFIMNTLAVKSIALPAPRPAINQGIDINNEMVLSHTAI
+ YADCLAQVTQENTVENALMVLNPYGTAPLSAYAGVWSLEPAEILVTVQDVAKTAMPVE
+ HLYSLTTGENLLPVLGLVADTENRIVFSQADTPLAAYTLTTQSLPPVDSADVVLGFPI
+ INVTQPAIDADKMAPGFYFITHFDRYNYALDQNGLVRWYVTQDYPSYNFVRIDNGHFL
+ TTSEAKNTYLDMYEFDMMGRLYTFYNLDNQFHHSIWPWDSNTIVAPSEYTSGRPDDLK
+ TNEDGVSVVDLTSGLETAYYDMAKVLDTTRVSRPSGTAPGEDPTVKDWLHINQSYVNE
+ TNQLLIASGRHQSAVFGVDLQTQALRFILSTHEDWDDAYQPYLLTPVDSEGVALYDFS
+ KQEDIDAADHDFWTWGQHNVVEIANDAPGMVEFMVFDNGNYRSRDDSKSLLPPDNYSR
+ IVHFVVNINEMTVMRPFEYGKELGARGYSSCVSAKAIQQNGNIVVHFADCTFDENGRA
+ ISCQPGESDIIDSQAGSEAMGLLILQEIAPTEKTVLFEATMTSGYYKNAEKNGEGYRY
+ DITSFRVYKMDLYA"
+ misc_feature complement(2881496..2883007)
+ /locus_tag="SARI_02953"
+ /note="Arylsulfotransferase (ASST); Region:
+ Arylsulfotrans; pfam05935"
+ /db_xref="CDD:218815"
+ gene complement(2883290..2884273)
+ /locus_tag="SARI_02954"
+ CDS complement(2883290..2884273)
+ /locus_tag="SARI_02954"
+ /inference="protein motif:ScanRegExp:IPR002223"
+ /inference="similar to AA sequence:INSD:AAL19001.1"
+ /note="'COG: NOG26060 non supervised orthologous group;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571942.1"
+ /db_xref="GI:161504830"
+ /db_xref="InterPro:IPR002223"
+ /translation="MYCRQCNKTFISYTAIRSDARQENLATLIGEGASLVEIRAALAV
+ DSTGFSRELQKLSRRVNQAERDFVFPAFDIAMSTRAFRVQFNGGDSSLYVLVTAEEES
+ GKVVAISTNYSAQPVEADYQYRSEYEERLPSGTLAHLVQRKEALTMRRNVLFDVDYGP
+ AVLYKNDPGMLVKPVLPAYRHFELVQALTDERSLNVQHYLDHECFILGGCMMANFNYL
+ RQGRCHISFVRERGFMPPKRDLPPRLFLSGGIRNNVWRTFSTRDYAMAVCNLTGNKKV
+ SLLRHATLNSATAFIRYVHHHPFLPHLNRMSPGNVVAVLDYLKFEYNAYVK"
+ gene complement(2884562..2885788)
+ /locus_tag="SARI_02955"
+ CDS complement(2884562..2885788)
+ /locus_tag="SARI_02955"
+ /inference="protein motif:Gene3D:IPR012285"
+ /inference="protein motif:HMMPfam:IPR007197"
+ /inference="similar to AA sequence:INSD:AAL19000.1"
+ /note="'KEGG: syg:sync_2368 6.6e-16 arylsulfatase
+ regulator;
+ COG: COG0641 Arylsulfatase regulator (Fe-S
+ oxidoreductase);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571943.1"
+ /db_xref="GI:161504831"
+ /db_xref="InterPro:IPR007197"
+ /db_xref="InterPro:IPR012285"
+ /translation="MLDQVLLFQGKVKMSGKSCQVMVKPTGSVCNLDCKYCFYLEKEK
+ LYPDRKNHYKMSEETLELFIRQQIAAQDIDEVIFAWQGGEPTLMGIPFYRKAIEFQQR
+ YCGGKTIVNTFQTNGILINDEWAAFFREHDFLVGVSIDGDAALHDEWRMTRSGKPTHE
+ KVENAVRCLAQHDVEFNTLTVVNRTNMHHPIQVYRYLKSIGSRYMQFIPLVERCGENG
+ LAQPQDKHIAMTPWSVDSLQFGQFLNVVFDVWIREDIGDIGIQLFEQTLAAWCGLPPQ
+ VCVFAPTCGSAFAMEMNGDVYNCDHFVYPQFKLGNIHQKTLRQMNHSEQNLQFGSDKQ
+ RLMAQECHFCQWKFACYGGCPKHRFLPSVSGAINHNYLCAGYQAFFSHTATAMNAMRT
+ LYEKGISPAEIKSIFV"
+ misc_feature complement(2884610..2885731)
+ /locus_tag="SARI_02955"
+ /note="anaerobic sulfatase-maturating enzyme; Region:
+ sulfatase_rSAM; TIGR03942"
+ /db_xref="CDD:188457"
+ misc_feature complement(<2885255..2885701)
+ /locus_tag="SARI_02955"
+ /note="Radical SAM superfamily. Enzymes of this family
+ generate radicals by combining a 4Fe-4S cluster and
+ S-adenosylmethionine (SAM) in close proximity. They are
+ characterized by a conserved CxxxCxxC motif, which
+ coordinates the conserved iron-sulfur cluster; Region:
+ Radical_SAM; cd01335"
+ /db_xref="CDD:100105"
+ misc_feature complement(order(2885375..2885377,2885441..2885449,
+ 2885537..2885542,2885546..2885548,2885675..2885683,
+ 2885687..2885689,2885693..2885695,2885699..2885701))
+ /locus_tag="SARI_02955"
+ /note="FeS/SAM binding site; other site"
+ /db_xref="CDD:100105"
+ misc_feature complement(2884670..2884939)
+ /locus_tag="SARI_02955"
+ /note="radical SAM additional 4Fe4S-binding SPASM domain;
+ Region: rSAM_more_4Fe4S; TIGR04085"
+ /db_xref="CDD:234461"
+ gene complement(2885852..2887345)
+ /locus_tag="SARI_02956"
+ CDS complement(2885852..2887345)
+ /locus_tag="SARI_02956"
+ /inference="protein motif:HMMPfam:IPR000917"
+ /inference="protein motif:ScanRegExp:IPR000917"
+ /inference="similar to AA sequence:INSD:AAL18999.1"
+ /note="'KEGG: eci:UTI89_C0020 7.5e-246 hypothetical
+ protein K01134;
+ COG: COG3119 Arylsulfatase A and related enzymes;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571944.1"
+ /db_xref="GI:161504832"
+ /db_xref="InterPro:IPR000917"
+ /translation="MKRTVVASMIGLVLCAGSVLSTAQAATAKRPNLVIILADDLGYG
+ DLATYGHRIVKTPNIDKLAQEGVKFTDYYAPAPLCSPSRAGLLTGRMPFRTGIRSWIP
+ EGKDVALGRNELTIANLLKQQGYDTAMMGKLHLNAGGDRTDQPQAKDMGFDYTLVNPA
+ GFVSDATLDNAKERPRYGMVHPTGWIRNGQHIGRADKMSGEFVSSEVVNWLDNKKDDN
+ PFFLYVAFTEVHSPLASPKKYLDMYSQYMTDYQKQHPDLFYGDWADKPWRGTGEYYAN
+ ISYMDEQVGKVLDKIKAMGEEDNTIIIFTSDNGPVTREARKVYELNLAGETDGLRGRK
+ DNLWEGGIRVPAIIKYGKHIPQGMVTDTPVYGLDWLPTLANMMDFKLPTDRTYDGQSL
+ VPLLKDKTLKRQKPLIFGIDMPFQDDPTDEWAIRDGDWKMIIDRQNKPKYLYNLKIDR
+ FETLNQMGKQPQIEKQLYGKFLKYKKDIDNDSLMKARGDKPTPVTWG"
+ misc_feature complement(2885891..2887267)
+ /locus_tag="SARI_02956"
+ /note="Arylsulfatase A and related enzymes [Inorganic ion
+ transport and metabolism]; Region: AslA; COG3119"
+ /db_xref="CDD:225661"
+ misc_feature complement(2886149..2887255)
+ /locus_tag="SARI_02956"
+ /note="Sulfatase; Region: Sulfatase; pfam00884"
+ /db_xref="CDD:216172"
+ gene 2887927..2888700
+ /locus_tag="SARI_02957"
+ CDS 2887927..2888700
+ /locus_tag="SARI_02957"
+ /inference="protein motif:HMMPfam:IPR010786"
+ /inference="similar to AA sequence:REFSEQ:NP_459039.1"
+ /note="'COG: NOG25516 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571945.1"
+ /db_xref="GI:161504833"
+ /db_xref="InterPro:IPR010786"
+ /translation="MELSMKNKKYINSLLAACVLFSCFNGQAAELKRVYGKLSFGYGD
+ WNKGFVNVDRGEVWKAVADFGAVFDRGEFASFYEMNVLNHPVEGRNHVTQFLGHYRPI
+ EGSDFTVMMKLYMSMENKFGDELNMMYGVGYLGLTSPSGFIKPYIAVHNLSNDYTSKK
+ YGQATGFNGYVLGWVAAYNFDMFNEKFVIANWNEVEMDRNDAYAEQQGGTTGLNGAVT
+ FTWKFMPRWTASVSYRYFNNKLGYDGYGDRMNYLIGFEF"
+ misc_feature 2888047..2888697
+ /locus_tag="SARI_02957"
+ /note="Nucleoside-specific channel-forming protein, Tsx;
+ Region: Channel_Tsx; pfam03502"
+ /db_xref="CDD:217594"
+ gene 2888799..2890370
+ /locus_tag="SARI_02958"
+ CDS 2888799..2890370
+ /locus_tag="SARI_02958"
+ /inference="protein motif:Gene3D:IPR008334"
+ /inference="protein motif:HMMPanther:IPR006179"
+ /inference="protein motif:HMMPfam:IPR004843"
+ /inference="protein motif:HMMPfam:IPR008334"
+ /inference="protein motif:ScanRegExp:IPR006146"
+ /inference="protein motif:superfamily:IPR008334"
+ /inference="similar to AA sequence:REFSEQ:NP_454644.1"
+ /note="'KEGG: eci:UTI89_C4528 5.3e-165 hypothetical
+ protein K01119;
+ COG: COG0737 5-nucleotidase/2,3-cyclic phosphodiesterase
+ and related esterases;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571946.1"
+ /db_xref="GI:161504834"
+ /db_xref="InterPro:IPR004843"
+ /db_xref="InterPro:IPR006146"
+ /db_xref="InterPro:IPR006179"
+ /db_xref="InterPro:IPR008334"
+ /translation="MVYMNKKFSISLLSLCIGLSSAISFSADARDITIYYTNDLHAHV
+ SPEIIPYVSKTRPVGGFAPISKIVKDAKAKEKDVFFFDAGDYFTGPFISTLTKGEAII
+ DILNTMPYDAVSVGNHEFDHGHENLVKQLSKLKFPVLLNNVFYSGTDTPLIKDPYTIV
+ EKDGFKIGVIGMHGVSAFYEAIAAGVREGVDCRDPIPYVKKQLEELKGKVDLTVLLAH
+ EGVPGMQSSAGEADVARALKTDVDMAKALEGYGLNVLITGHAHKGTPEPIKVGDTLVV
+ STDAYTIELGKLVLDWNPATKKVDSYNGKLITMYADTYKPDPVTQAKIDEWDNKVKKI
+ TDEVVAHSPEVLTRSYGESAPTGNLITDALMATVPGADASFYNAGGIRTELPKGNITY
+ GDVLSMYPFTNDVMSMEISGKDLKSIMSHAADLKNGMLHVSKTVQFKYDSTKPLGQRI
+ VAFDIKGKPVEDNKLYTVALDSFIGKGGGGFTFTKGKNIKYIGIQTAPALVNYMKQVS
+ NIQPDHTMRVDDISK"
+ misc_feature 2888877..2890361
+ /locus_tag="SARI_02958"
+ /note="5'-nucleotidase/2',3'-cyclic
+ phosphodiesterase and related esterases [Nucleotide
+ transport and metabolism]; Region: UshA; COG0737"
+ /db_xref="CDD:223808"
+ misc_feature 2888892..2889725
+ /locus_tag="SARI_02958"
+ /note="Escherichia coli UshA-like family, N-terminal
+ metallophosphatase domain; Region: MPP_UshA_N_like;
+ cd00845"
+ /db_xref="CDD:163620"
+ misc_feature order(2888913..2888915,2888919..2888921,2889051..2889053,
+ 2889147..2889152,2889450..2889452,2889573..2889575,
+ 2889579..2889581)
+ /locus_tag="SARI_02958"
+ /note="active site"
+ /db_xref="CDD:163620"
+ misc_feature order(2888913..2888915,2888919..2888921,2889051..2889053,
+ 2889147..2889149,2889450..2889452,2889573..2889575,
+ 2889579..2889581)
+ /locus_tag="SARI_02958"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:163620"
+ misc_feature 2889846..2890220
+ /locus_tag="SARI_02958"
+ /note="5'-nucleotidase, C-terminal domain; Region:
+ 5_nucleotid_C; pfam02872"
+ /db_xref="CDD:217260"
+ gene complement(2890416..2892134)
+ /locus_tag="SARI_02959"
+ CDS complement(2890416..2892134)
+ /locus_tag="SARI_02959"
+ /inference="protein motif:HMMPfam:IPR010262"
+ /inference="similar to AA sequence:INSD:"
+ /note="'KEGG: lpl:lp_1381 7.2e-22 astA; arylsulfate
+ sulfotransferase K01023;
+ COG: NOG14106 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571947.1"
+ /db_xref="GI:161504835"
+ /db_xref="InterPro:IPR010262"
+ /translation="MNKKISSMVNLPAPREPINQKIDINNELVSNHNAIHEQRLAEIA
+ QSNAFDKAIVTINPYGTAPLSLYLGVWIDEAATLEINVIDSEATTEAVRYQYDVHPGA
+ NLIPVCGMVSGVNNQITLRLASQMVGQYTVMTNVLPPTDSASVSLGFPIISVSYPAQQ
+ ASLVDEGLYFSTYFDRYNLAFDHNGIVRWYVSQDIPSYNFVRMDNGHFLATSQGINHC
+ LNMYEFDIMGRVYTVYLLDNEFHHSILPLENNLAIAPSEYSNGRPDGYSTGKDGVSII
+ NLSTGLEVAYYDMLHVMDYSRSPRPSGSAPGQDVSMDDWLHINQSYINEPNNLLVCSG
+ RHQSAIFGVNVDTGDLRFIMANHEDWSDEFKQYLLTPVDDNGVPLYDLTSLGGIDAAD
+ KDFWTWGQHNIVEIPNDEPGILAFLVFDNGNYRSREDARSLLPLDNFSRVVQFKINLN
+ TMTVTRPYEYGKTEVGNRGYSSFVSAKHLLSNGNLVIHFGATTVDEFGHTITAQPGFS
+ DLVDPDEGQQALGRLVLQEINKETKEVLFEATVTSGYFKNEEMNGANYRYDISAFRVY
+ KMPLFE"
+ misc_feature complement(2890464..2891975)
+ /locus_tag="SARI_02959"
+ /note="Arylsulfotransferase (ASST); Region:
+ Arylsulfotrans; pfam05935"
+ /db_xref="CDD:218815"
+ gene 2892658..2893089
+ /locus_tag="SARI_02960"
+ CDS 2892658..2893089
+ /locus_tag="SARI_02960"
+ /inference="protein motif:BlastProDom:IPR001867"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="similar to AA sequence:REFSEQ:YP_149380.1"
+ /note="'COG: COG3710 DNA-binding winged-HTH domains;
+ Psort location: vesicles of secretory system, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571948.1"
+ /db_xref="GI:161504836"
+ /db_xref="InterPro:IPR001867"
+ /db_xref="InterPro:IPR011991"
+ /translation="MTIYFINNTHTYNDKTNELKNIKTGKMIKIAAMRVKCLEYMLNH
+ AQQEIIYKTQLSNELWGERSQFISDANLTQILYLLRRDLKDFGLTQFFSTIPRIGIKV
+ DADIIISDKKDLPPFKKGANKYMALFFALLTMVTMVIFLTQ"
+ misc_feature 2892658..2893083
+ /locus_tag="SARI_02960"
+ /note="DNA-binding winged-HTH domains [Transcription];
+ Region: CadC; COG3710"
+ /db_xref="CDD:226233"
+ gene complement(2893102..2894100)
+ /locus_tag="SARI_02961"
+ CDS complement(2893102..2894100)
+ /locus_tag="SARI_02961"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="similar to AA sequence:INSD:AAV76067.1"
+ /note="'COG: COG0583 Transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571949.1"
+ /db_xref="GI:161504837"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR011991"
+ /translation="MQPIKNAKKIDYNLIKVFDMVITEGNATRAARKLDVTPAAISQA
+ LLRLQNLYGEELFIRTRKGLVPSSKGKSLHQVFRQAIESIESTLYDKTYVQESNELIV
+ LGSDITENYYFPALLDTMLVNRHVIKHYAIKKTGEYSPASMLTHGYTDVIMGIVEINN
+ EMIESYPIDNLSDFVCICGEKSPLVGLEQISLYNFYAARHAVYHSDMFSSFAADAIDL
+ FKNSAPYTGRREIGYHSDSLFGIMGVVEKSDMVAILPRKIAAYFRDVRRYNIKIIRMP
+ DEIIFRTLPVYAYLATNGTRYKNAKKLISTLQSTFLFRPDEQSDTLAEDSTSLCRL"
+ misc_feature complement(2893150..2894073)
+ /locus_tag="SARI_02961"
+ /note="Transcriptional regulator [Transcription]; Region:
+ LysR; COG0583"
+ /db_xref="CDD:223656"
+ misc_feature complement(2893888..2894064)
+ /locus_tag="SARI_02961"
+ /note="Bacterial regulatory helix-turn-helix protein, lysR
+ family; Region: HTH_1; pfam00126"
+ /db_xref="CDD:215735"
+ misc_feature complement(2893234..>2893656)
+ /locus_tag="SARI_02961"
+ /note="The substrate binding domain of LysR-type
+ transcriptional regulators (LTTRs), a member of the type 2
+ periplasmic binding fold protein superfamily; Region:
+ PBP2_LTTR_substrate; cl11398"
+ /db_xref="CDD:245600"
+ gene 2894468..2894917
+ /locus_tag="SARI_02962"
+ CDS 2894468..2894917
+ /locus_tag="SARI_02962"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR001867"
+ /inference="similar to AA sequence:REFSEQ:NP_459034.1"
+ /note="'COG: COG3710 DNA-binding winged-HTH domains;
+ Psort location: vesicles of secretory system, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571950.1"
+ /db_xref="GI:161504838"
+ /db_xref="InterPro:IPR001867"
+ /db_xref="InterPro:IPR011991"
+ /translation="MRKYTINNDFIYNESLREIISLRDKKVLKVTLMRARCLSYLFEN
+ AYKKLITREMISHAVWGERSQFVSDANLTQLLYLLRRDLEQIGLFKLFITLPRQGIKI
+ DERFIINSADIPPQNIQSRTHRYNKIISIGIPALFLLFLLFFLALFI"
+ misc_feature 2894468..2894869
+ /locus_tag="SARI_02962"
+ /note="DNA-binding winged-HTH domains [Transcription];
+ Region: CadC; COG3710"
+ /db_xref="CDD:226233"
+ gene complement(2895018..2895347)
+ /locus_tag="SARI_02963"
+ CDS complement(2895018..2895347)
+ /locus_tag="SARI_02963"
+ /inference="similar to AA sequence:INSD:AAF21716.1"
+ /note="'COG: NOG31826 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571951.1"
+ /db_xref="GI:161504839"
+ /translation="MIFEQRRAHRSESKMNTMRYVMLMILLSFIVHEGRTKPTAQIHF
+ MGSVVEAGCWNDVGTLEIQCHNKEGIERYIIVEHIVTPILSPHAMVKQDYLDEDKQLT
+ VLRIVYD"
+ gene complement(2895344..2896189)
+ /locus_tag="SARI_02964"
+ CDS complement(2895344..2896189)
+ /locus_tag="SARI_02964"
+ /inference="protein motif:Gene3D:IPR012335"
+ /inference="protein motif:HMMPfam:IPR001853"
+ /inference="protein motif:superfamily:IPR012336"
+ /inference="similar to AA sequence:INSD:AAV76064.1"
+ /note="'KEGG: mca:MCA2602 0.0073 dsbA; THIol:disulfide
+ interchange protein DsbA K03673;
+ COG: COG1651 Protein-disulfide isomerase;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571952.1"
+ /db_xref="GI:161504840"
+ /db_xref="InterPro:IPR001853"
+ /db_xref="InterPro:IPR012335"
+ /db_xref="InterPro:IPR012336"
+ /translation="MYYHALKLSRLAMLTLASVAVSGAAIAADSVPTSQIGPTAEAYI
+ VSHPDKVGEVVATYLAEHPEFLVAASETLHQRQQIAQQQAYVQLALQYRAELLSSNSP
+ SVGPADAKAAVVMFFDYQCSWCSKMAPVVENLIKANPDTRFIFKEFPIFSSRWPVSGL
+ AARVGEQVWLTQGGEKYLAWHNALYATGKVEGALTEQDVYTLAQHYLTPKQLAVVKEA
+ QSRGAVHDALLTNQALAQHMDFSGTPAFVVMPQTQNGDVKRVAVIPGSTTQDMLQMAI
+ QKAKG"
+ misc_feature complement(2895359..2895877)
+ /locus_tag="SARI_02964"
+ /note="DsbA family, Com1-like subfamily; composed of
+ proteins similar to Com1, a 27-kDa outer
+ membrane-associated immunoreactive protein originally
+ found in both acute and chronic disease strains of the
+ pathogenic bacteria Coxiella burnetti. It contains a
+ CXXC...; Region: DsbA_Com1_like; cd03023"
+ /db_xref="CDD:239321"
+ misc_feature complement(2895359..2895856)
+ /locus_tag="SARI_02964"
+ /note="DSBA-like thioredoxin domain; Region: DSBA;
+ pfam01323"
+ /db_xref="CDD:216433"
+ misc_feature complement(order(2895818..2895820,2895827..2895829))
+ /locus_tag="SARI_02964"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:239321"
+ gene complement(2896255..2896959)
+ /locus_tag="SARI_02965"
+ CDS complement(2896255..2896959)
+ /locus_tag="SARI_02965"
+ /inference="protein motif:BlastProDom:IPR001829"
+ /inference="protein motif:Gene3D:IPR001829"
+ /inference="protein motif:HMMPfam:IPR001829"
+ /inference="protein motif:ScanRegExp:IPR001829"
+ /inference="protein motif:superfamily:IPR008962"
+ /inference="similar to AA sequence:INSD:AAV76063.1"
+ /note="'COG: COG3121 P pilus assembly protein, chaperone
+ PapD;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571953.1"
+ /db_xref="GI:161504841"
+ /db_xref="InterPro:IPR001829"
+ /db_xref="InterPro:IPR008962"
+ /translation="MNKFFLRWAICWFLLPVSWAQAGVVIGGTRFIYHAGAPALSVPV
+ SNHSDAFWLIDTHILPGDRWTGAKSAGNSTPFVVTPPLFMLSARQENTLRVVYTGEPL
+ PADRESLFTLSIAAIPSGKPEANRVQMAFRSALKLLYRPDGLAGEPQQAYRHLVWNLT
+ PDGATVRNPTPYYVTLFLLRANGRAQNNAGVVAPFATRQTDWCRHTVRCTVRWQSIND
+ YGRVMTAQTVDLTRMH"
+ misc_feature complement(2896258..2896959)
+ /locus_tag="SARI_02965"
+ /note="fimbrial chaperone BcfG; Provisional; Region:
+ PRK15192"
+ /db_xref="CDD:185114"
+ misc_feature complement(2896525..2896893)
+ /locus_tag="SARI_02965"
+ /note="Gram-negative pili assembly chaperone, N-terminal
+ domain; Region: Pili_assembly_N; pfam00345"
+ /db_xref="CDD:215870"
+ misc_feature complement(2896288..2896467)
+ /locus_tag="SARI_02965"
+ /note="Gram-negative pili assembly chaperone, C-terminal
+ domain; Region: Pili_assembly_C; pfam02753"
+ /db_xref="CDD:217216"
+ gene complement(2896952..2897470)
+ /locus_tag="SARI_02966"
+ CDS complement(2896952..2897470)
+ /locus_tag="SARI_02966"
+ /inference="protein motif:Gene3D:IPR000259"
+ /inference="protein motif:HMMPfam:IPR000259"
+ /inference="protein motif:superfamily:IPR008966"
+ /inference="similar to AA sequence:INSD:AAF21714.1"
+ /note="'COG: COG3539 P pilus assembly protein, pilin FimA;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="fimbrial subunit"
+ /protein_id="YP_001571954.1"
+ /db_xref="GI:161504842"
+ /db_xref="InterPro:IPR000259"
+ /db_xref="InterPro:IPR008966"
+ /translation="MRSNILCGIGMLLAASAVQAHDGRVYVSGTITDNTCSLSPGSEN
+ INVSMGAVSQRQFYRVGDGSAWQSFAIDLQNCGSTASGVTVSFSGAADSRNMDLLALT
+ AGESDASGIGIALYDLNKTLIPLGQKSDVTTLSPGQASAHLQFYARYLADGGVVATGD
+ ANASATFILAYE"
+ misc_feature complement(2896955..2897470)
+ /locus_tag="SARI_02966"
+ /note="fimbrial protein BcfF; Provisional; Region:
+ PRK15191"
+ /db_xref="CDD:185113"
+ gene complement(2897486..2898025)
+ /locus_tag="SARI_02967"
+ CDS complement(2897486..2898025)
+ /locus_tag="SARI_02967"
+ /inference="protein motif:Gene3D:IPR000259"
+ /inference="protein motif:HMMPfam:IPR000259"
+ /inference="protein motif:superfamily:IPR008966"
+ /inference="similar to AA sequence:REFSEQ:YP_215010.1"
+ /note="'COG: COG3539 P pilus assembly protein, pilin FimA;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="fimbrial subunit"
+ /protein_id="YP_001571955.1"
+ /db_xref="GI:161504843"
+ /db_xref="InterPro:IPR000259"
+ /db_xref="InterPro:IPR008966"
+ /translation="MNKSRFALFALVLILCQEIHASADDLAYNLEFTGTIVAQTCDMD
+ ISSLSQSIDLGQFAVGDFPSTGTTTKFKPFNINLKNCSRGIAGAKIWFTGEPDPDNPA
+ LLAITDTGMGSMLASGIGVEILNEDQDTVSINNTDSVVYPLKAGRNTLSFYIRYKSTR
+ PTVTSGNATAVMYFDMQYE"
+ misc_feature complement(2897489..2898025)
+ /locus_tag="SARI_02967"
+ /note="fimbrial protein BcfE; Provisional; Region:
+ PRK15190"
+ /db_xref="CDD:185112"
+ gene complement(2898026..2899033)
+ /locus_tag="SARI_02968"
+ CDS complement(2898026..2899033)
+ /locus_tag="SARI_02968"
+ /inference="protein motif:Gene3D:IPR000259"
+ /inference="protein motif:HMMPfam:IPR000259"
+ /inference="protein motif:superfamily:IPR008966"
+ /inference="similar to AA sequence:INSD:AAV76061.1"
+ /note="'COG: COG3539 P pilus assembly protein, pilin FimA;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571956.1"
+ /db_xref="GI:161504844"
+ /db_xref="InterPro:IPR000259"
+ /db_xref="InterPro:IPR008966"
+ /translation="MKIHLLFTLLMGSAVSQYALADVCKNVNGVPSRVNYDLTTTLTA
+ EQNQVGKTVQLEKNQEANVQVVCPAGTAAYSQIYRSYVSQYPVVETSGNWKYLKLDPD
+ HLEGGMRIVDSAVGATYPPVNNILMGYDEQVKAGQPFHIRNSNLEFQLKIVKPFVGTV
+ NISPKTMFNVYVTTATGDPLSDVVYSIMYSGTVTVPQSCEINAGQTILVNLGALYSGN
+ FSHAGQKPVGIRAKKFSVPVKCSGLDSQVNLTMRLIATPDSHFPQAIASDNADVGVVV
+ ETDEGNVLIPNDVQRVAPFITDSAGRANITLQAYPVSTTGETPTEGTFTALASLRVDF
+ D"
+ misc_feature complement(2898029..2899033)
+ /locus_tag="SARI_02968"
+ /note="fimbrial protein BcfD; Provisional; Region:
+ PRK15189"
+ /db_xref="CDD:185111"
+ unsure 2898709..2898802
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(2899034..2901655)
+ /locus_tag="SARI_02969"
+ CDS complement(2899034..2901655)
+ /locus_tag="SARI_02969"
+ /inference="protein motif:HMMPfam:IPR000015"
+ /note="'COG: COG3188 P pilus assembly protein, porin PapC;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571957.1"
+ /db_xref="GI:161504845"
+ /db_xref="InterPro:IPR000015"
+ /translation="MRNTLFMTQYYSGVAQSVLPRLALIIALVPVPGWTENYFNPAFL
+ SDDPSAVADLSTFSRNAQAAGMYRVDVYLNNTFFATKDVSFQAVKTTGQSAPTDDSGL
+ HACLTPEMLKNMGVNTGAFPLLATSAAGSCPDLASAIPAARTRFDFAQQRLDISIPQA
+ AMITSARGYIPPQYWDEGINALLLNYTFTGANSRDRSADGGAENSYFLGLNSGLNLGA
+ WRLRDYSTWNTNSSYQNSDSDWQHISTYLERDVPFLQGELTAGDSYTSSALFDSLPFR
+ GLQLASDDNMLPDSMKGFAPTIHGIARSNAQVTIWQNGYIINQRYMPPGAFTINDLYP
+ TAASGDLTVEVKESDGAINRYNVPYSAVPILQREGGLKYAATVAEYRGDGNQKEKVKF
+ GQATLIWGLAHGFTVYGGTQLSSKYHALAIGSGANLGDWGAVSLDVTQATSTLADNNA
+ YQGKSLRFLYAKSLAQTGTNLQLLGYRYSTSGFYTLDDTAWKQMSGYDNDERTDPDES
+ TPEWADYYNLYYTRRGKVQLDINQQLGGMGSLFITGSQQSYWHTDEKDSLLQVGYSDT
+ LAGIAWSVSYNNNKSAGDSERDKIFALNISVPLSQWLQHDDEVTRRHNVYATLSTSTD
+ KQRNVTQNAGLNGTLLDENNLSYNIQQGYQNHGVGESGSASLEFDGAKGNANIGYNVS
+ DNGDYQQVNYGLSGGLVAHAHGLTLSQPLGNTNILVAAPGAANVGVVDQPGIHTDTRG
+ YAVVPYAVTYRQNRMALDVNAMADDVDIDDAVTRVVPTEGALVLARFKARVGARALLT
+ LDHYGKPVPFGATVTVNDRHTEAIVDEAGEVYLSGLSAQGILYARWGNLPNQHCVARY
+ QLPSSRQTLSRQRAECH"
+ misc_feature complement(2899037..2901649)
+ /locus_tag="SARI_02969"
+ /note="outer membrane usher protein; Provisional; Region:
+ PRK15193"
+ /db_xref="CDD:237919"
+ misc_feature complement(2901083..2901544)
+ /locus_tag="SARI_02969"
+ /note="PapC N-terminal domain; Region: PapC_N; pfam13954"
+ /db_xref="CDD:222472"
+ misc_feature complement(2899295..2901037)
+ /locus_tag="SARI_02969"
+ /note="Type VII secretion system (T7SS), usher protein;
+ Region: Usher; pfam00577"
+ /db_xref="CDD:216001"
+ misc_feature complement(2899073..2899267)
+ /locus_tag="SARI_02969"
+ /note="PapC C-terminal domain; Region: PapC_C; pfam13953"
+ /db_xref="CDD:222471"
+ gene complement(2901660..2902346)
+ /locus_tag="SARI_02970"
+ CDS complement(2901660..2902346)
+ /locus_tag="SARI_02970"
+ /inference="protein motif:BlastProDom:IPR001829"
+ /inference="protein motif:FPrintScan:IPR001829"
+ /inference="protein motif:Gene3D:IPR001829"
+ /inference="protein motif:HMMPfam:IPR001829"
+ /inference="protein motif:superfamily:IPR008962"
+ /inference="similar to AA sequence:INSD:AAD34371.1"
+ /note="'COG: COG3121 P pilus assembly protein, chaperone
+ PapD;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571958.1"
+ /db_xref="GI:161504846"
+ /db_xref="InterPro:IPR001829"
+ /db_xref="InterPro:IPR008962"
+ /translation="MKKTTPIFLRLLLLLSAAGLSFAAQAGGIALGATRVIYPQGSKQ
+ TSLPIINSSDSNVFLIQSWVANADGSRSTDFIVTPPLFVIQPKKENILRIMYVGPSLP
+ TDRESVFYLNSKAIPSVDKNKLTGNTLQIATQSVIKLFIRPKNLAEAPTHAPMTLCCR
+ NEYGQLTIVNPSPYYVSLVELHSAGKKLPNTMVPPKGAITLPATPGQVSFRTVNDFGA
+ TTPARVCSTS"
+ misc_feature complement(2901663..2902346)
+ /locus_tag="SARI_02970"
+ /note="fimbrial chaperone protein BcfB; Provisional;
+ Region: PRK15188"
+ /db_xref="CDD:185110"
+ misc_feature complement(2901906..2902265)
+ /locus_tag="SARI_02970"
+ /note="Gram-negative pili assembly chaperone, N-terminal
+ domain; Region: Pili_assembly_N; pfam00345"
+ /db_xref="CDD:215870"
+ misc_feature complement(2901684..2901851)
+ /locus_tag="SARI_02970"
+ /note="Gram-negative pili assembly chaperone, C-terminal
+ domain; Region: Pili_assembly_C; pfam02753"
+ /db_xref="CDD:217216"
+ gene complement(2902447..2902989)
+ /locus_tag="SARI_02971"
+ CDS complement(2902447..2902989)
+ /locus_tag="SARI_02971"
+ /inference="protein motif:Gene3D:IPR000259"
+ /inference="protein motif:HMMPfam:IPR000259"
+ /inference="protein motif:superfamily:IPR008966"
+ /inference="similar to AA sequence:INSD:AAL18985.1"
+ /note="'KEGG: bme:BMEII0149 0.0099 extracellular serine
+ protease;
+ COG: COG3539 P pilus assembly protein, pilin FimA;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="fimbrial subunit"
+ /protein_id="YP_001571959.1"
+ /db_xref="GI:161504847"
+ /db_xref="InterPro:IPR000259"
+ /db_xref="InterPro:IPR008966"
+ /translation="MKKTVLALMASAIVFGGMVSTAQADTTTVTGGTVNFVGQVVDAA
+ CSVSADSVDQTVTLSQVRASKLTGAGMVANQKEDFTIKLEDCDTQISQNAAIIFNGQQ
+ DANQPGSLANTAGAGSATNVALQIYGPDGQALNIGETSSTVTLNDGENVVPLSVDYIA
+ TGAATAGNVTATATFSMVYS"
+ misc_feature complement(2902450..2902989)
+ /locus_tag="SARI_02971"
+ /note="fimbrial protein BcfA; Provisional; Region:
+ PRK15187"
+ /db_xref="CDD:185109"
+ gene complement(2903419..2904114)
+ /locus_tag="SARI_02972"
+ CDS complement(2903419..2904114)
+ /locus_tag="SARI_02972"
+ /inference="similar to AA sequence:INSD:CAD01174.1"
+ /note="'COG: NOG25589 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571960.1"
+ /db_xref="GI:161504848"
+ /translation="MMNDPFAKDNNENLLHSFLFSQQAKPHAAIDALFSALLPFGQPF
+ TLGSGDEFYLQVNDENYIVLLESGIASFCRNDNRLHISSTFAPSIVGMVDSYGATYNV
+ RARPEHFLLAETDCTGRFVRLPDFIRIVDECDLWHDVARCLAYRLMVMSVRDRELVGV
+ DSYLKVRTLLIEIWAYPQAYRENIIVLNFIQRRTGISRSRVMKILSELKKGGYIHIDN
+ GRLMALGKLPVAY"
+ misc_feature complement(2903434..2904057)
+ /locus_tag="SARI_02972"
+ /note="cAMP-binding proteins - catabolite gene activator
+ and regulatory subunit of cAMP-dependent protein kinases
+ [Signal transduction mechanisms]; Region: Crp; COG0664"
+ /db_xref="CDD:223736"
+ misc_feature complement(2903473..2903616)
+ /locus_tag="SARI_02972"
+ /note="Helix-turn-helix domain; Region: HTH_36; pfam13730"
+ /db_xref="CDD:222348"
+ gene complement(2904405..2905674)
+ /locus_tag="SARI_02973"
+ /note="Pseudogene compared to gi|16763409|ref|NP_459024.1|
+ putative hydroxymethyltransferase [Salmonella typhimurium
+ LT2]"
+ gene complement(2905766..2907850)
+ /locus_tag="SARI_02974"
+ CDS complement(2905766..2907850)
+ /locus_tag="SARI_02974"
+ /inference="protein motif:Gene3D:IPR013781"
+ /inference="protein motif:HMMPfam:IPR001223"
+ /inference="protein motif:HMMPfam:IPR003610"
+ /inference="protein motif:HMMSmart:IPR011583"
+ /inference="protein motif:superfamily:IPR003610"
+ /note="'KEGG: vch:VCA0027 1.2e-49 chitinase K01183;
+ COG: COG3325 Chitinase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571961.1"
+ /db_xref="GI:161504849"
+ /db_xref="InterPro:IPR001223"
+ /db_xref="InterPro:IPR003610"
+ /db_xref="InterPro:IPR011583"
+ /db_xref="InterPro:IPR013781"
+ /translation="MATSKLIQGDTLTETSNAADGFNPAKEDSKFSYTSARVAKRVYN
+ KYKKADNKPKVFGYFTDWSQYDARLQGNDTPSERGRGYDLAQVSPTAYDKIIAGFVGI
+ VGFHKIDGQSRDVVQEAADACGKVKYEPTFLDPWGDFQSYVNVGHSVSGWDVDPKTVT
+ QSNTKGFLGGLRDLQAKAKQQGHDLVLSMSIGGWTMSNGFHEMASSAEARSIFAKGVV
+ KLFKQFPMFSEVDLDWEYPNVEAAGNPYGPEDGDNFALLIAELRKELDKAGRSDVKIS
+ IAASAVVANIAYSNVKALMSAGLYYINVMTYDFFGTPWAETLTHHTNLKALEKGAWGV
+ DTIIDHLLAEGFPADRINIGYAGYTRNGRDAEINSFSPLNGSYNPGAGTTTGTFESGT
+ SEWYDVIYNYLDLENQKGRNGFNVYTDQVADADYLYNPESKLFLSLDTPRSVKAKGEY
+ AAKLGLGGVFTWTVDQDNGVLVNAAREGLGYEIESEVIDMEPFYFEGINVEKDEDEED
+ KTVVVNHAPKAAIELLVVGGSTVQLSGAGSSDEDGDALTYSWGVPTEIDVADKTASVI
+ QFTTPEVSAKTTLQFTLFVRDEQGEPSSQQRFVLTVVPAASEIQPEPADEEDVTPEED
+ NVTPSEDDTPADENTPNPLWDKDTVYGASWGTFEIVSWKGHNYQVKWWSQGDQPDLNC
+ GAGGAWTDLGAY"
+ misc_feature complement(2906399..2907799)
+ /locus_tag="SARI_02974"
+ /note="Chitinase [Carbohydrate transport and metabolism];
+ Region: ChiA; COG3325"
+ /db_xref="CDD:225862"
+ misc_feature complement(2906450..2907688)
+ /locus_tag="SARI_02974"
+ /note="The GH18 (glycosyl hydrolases, family 18) type II
+ chitinases hydrolyze chitin, an abundant polymer of
+ N-acetylglucosamine and have been identified in bacteria,
+ fungi, insects, plants, viruses, and protozoan parasites.
+ The structure of this domain is an...; Region:
+ GH18_chitinase; cd06548"
+ /db_xref="CDD:119365"
+ misc_feature complement(order(2906465..2906467,2906777..2906779,
+ 2906927..2906932,2906936..2906938,2907146..2907148,
+ 2907152..2907154,2907158..2907160,2907554..2907556,
+ 2907677..2907679))
+ /locus_tag="SARI_02974"
+ /note="active site"
+ /db_xref="CDD:119365"
+ misc_feature complement(2905769..2906311)
+ /locus_tag="SARI_02974"
+ /note="Uncharacterized protein contain chitin-binding
+ domain type 3 [General function prediction only]; Region:
+ COG3979"
+ /db_xref="CDD:226487"
+ misc_feature complement(2905781..2905927)
+ /locus_tag="SARI_02974"
+ /note="Chitin-binding domain of chitinase C; Region:
+ ChiC_BD; cd12215"
+ /db_xref="CDD:213178"
+ misc_feature complement(2905835..2905840)
+ /locus_tag="SARI_02974"
+ /note="aromatic chitin/cellulose binding site residues
+ [chemical binding]; other site"
+ /db_xref="CDD:213178"
+ gene 2908241..2908684
+ /locus_tag="SARI_02975"
+ CDS 2908241..2908684
+ /locus_tag="SARI_02975"
+ /inference="protein motif:BlastProDom:IPR001867"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="similar to AA sequence:INSD:CAD01170.1"
+ /note="'COG: COG3710 DNA-binding winged-HTH domains;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571962.1"
+ /db_xref="GI:161504850"
+ /db_xref="InterPro:IPR001867"
+ /db_xref="InterPro:IPR011991"
+ /translation="MKSYIINRSCIYNEDKYELRTASNSQVIKMTAMRAKCLSFIIEN
+ AHLEIIERQKITATLWGSRSHYVNDANLTQILYLIRRDLKALGINDLFITIPRQGLKV
+ NRDISITAMDSETKGRKKQIIRQTIAALTTVFSVTLGSLMYLHIH"
+ misc_feature 2908241..2908681
+ /locus_tag="SARI_02975"
+ /note="DNA-binding winged-HTH domains [Transcription];
+ Region: CadC; COG3710"
+ /db_xref="CDD:226233"
+ gene 2908701..2909234
+ /locus_tag="SARI_02976"
+ CDS 2908701..2909234
+ /locus_tag="SARI_02976"
+ /inference="protein motif:HMMPfam:IPR008565"
+ /inference="similar to AA sequence:REFSEQ:YP_215003.1"
+ /note="'COG: COG3926 Putative secretion activating
+ protein;
+ Psort location: cytoskeletal, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571963.1"
+ /db_xref="GI:161504851"
+ /db_xref="InterPro:IPR008565"
+ /translation="MNPIIDGIITLEGGYVFNPKDKGGATHWGITEATARAHGYAGDM
+ RDLTRAEAYSILEEDYWIKPGFNIISTLSWSISFELCDAAVNIGAYYPSVWLQRWLNI
+ FNHEGKRYPDIHVDGNIGPQTLTALEHYLAWRGQEGEAVLVKALNCSQGAYYLNVAEK
+ DHNNEQFIYGWIKNRVT"
+ misc_feature 2908701..>2909231
+ /locus_tag="SARI_02976"
+ /note="Lysozyme family protein [General function
+ prediction only]; Region: zliS; COG3926"
+ /db_xref="CDD:226439"
+ misc_feature 2908710..2908964
+ /locus_tag="SARI_02976"
+ /note="Glycosyl hydrolase 108; Region: Glyco_hydro_108;
+ pfam05838"
+ /db_xref="CDD:203334"
+ misc_feature 2908971..2909228
+ /locus_tag="SARI_02976"
+ /note="Predicted Peptidoglycan domain; Region:
+ PG_binding_3; pfam09374"
+ /db_xref="CDD:220210"
+ gene complement(2909294..2909638)
+ /locus_tag="SARI_02977"
+ CDS complement(2909294..2909638)
+ /locus_tag="SARI_02977"
+ /inference="similar to AA sequence:INSD:AAV76053.1"
+ /note="'COG: NOG17566 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571964.1"
+ /db_xref="GI:161504852"
+ /translation="MSIPNHVSTTEVVLLELEILLTIIAIGAWGGFVSYLLRKDKTEY
+ NSSHENIKYCLTQIIISCFTSFLLSAIAIEKECSFNIVLLAAGLGGVFAGPILKILGQ
+ RIKKIIEGNNLD"
+ gene complement(2909765..2910712)
+ /locus_tag="SARI_02978"
+ CDS complement(2909765..2910712)
+ /locus_tag="SARI_02978"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="similar to AA sequence:REFSEQ:NP_454624.1"
+ /note="'COG: COG0583 Transcriptional regulator;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571965.1"
+ /db_xref="GI:161504853"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR011991"
+ /translation="MGSKGANKSFDYNLIKVLDAVILSGNAAMAAKKLGITPAAVSLA
+ LKRLQSYYPEELFSRGKGGLIPTAKAVDIHQNFSQVMKLVDDTFLSKSKKDEAFQITL
+ LGSDIVESYYLSQINNSDIFDRILINHFSVRNMSRERISELLFTAQGDLLIGAEPLLE
+ SGIENQVIDSFKTFVCICSSKHMLSTLSQLSLHHFYSSRHALYQPGMGVSVIYHDSQL
+ LKDERYYTSKRIVGYRSDSLNGLMSMIERTSLIALMPLKLALFYKNHRRYAIKFIQPP
+ PELAFKSIQVYASWNKNSRNISAINEMVGMLQTLSSFRR"
+ misc_feature complement(2909789..2910685)
+ /locus_tag="SARI_02978"
+ /note="Transcriptional regulator [Transcription]; Region:
+ LysR; COG0583"
+ /db_xref="CDD:223656"
+ misc_feature complement(2910503..2910676)
+ /locus_tag="SARI_02978"
+ /note="Bacterial regulatory helix-turn-helix protein, lysR
+ family; Region: HTH_1; pfam00126"
+ /db_xref="CDD:215735"
+ misc_feature complement(2909837..2910412)
+ /locus_tag="SARI_02978"
+ /note="The substrate binding domain of LysR-type
+ transcriptional regulators (LTTRs), a member of the type 2
+ periplasmic binding fold protein superfamily; Region:
+ PBP2_LTTR_substrate; cl11398"
+ /db_xref="CDD:245600"
+ misc_feature complement(order(2909972..2909977,2909981..2909986,
+ 2910002..2910019,2910311..2910328,2910332..2910334,
+ 2910344..2910346,2910353..2910358,2910368..2910373))
+ /locus_tag="SARI_02978"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:176102"
+ gene complement(2910992..2912119)
+ /locus_tag="SARI_02979"
+ CDS complement(2910992..2912119)
+ /locus_tag="SARI_02979"
+ /inference="protein motif:FPrintScan:IPR003095"
+ /inference="protein motif:HMMPfam:IPR001305"
+ /inference="protein motif:HMMPfam:IPR001623"
+ /inference="protein motif:HMMPfam:IPR002939"
+ /inference="protein motif:HMMSmart:IPR001623"
+ /inference="protein motif:HMMTigr:IPR012724"
+ /inference="protein motif:ScanRegExp:IPR001623"
+ /inference="protein motif:superfamily:IPR001623"
+ /inference="protein motif:superfamily:IPR008971"
+ /inference="similar to AA sequence:REFSEQ:YP_149363.1"
+ /note="'chaperone Hsp40; co-chaperone with DnaK;
+ Participates actively in the response to hyperosmotic and
+ heat shock by preventing the aggregation of
+ stress-denatured proteins and by disaggregating proteins,
+ also in an autonomous, dnaK-independent fashion'"
+ /codon_start=1
+ /transl_table=11
+ /product="chaperone protein DnaJ"
+ /protein_id="YP_001571966.1"
+ /db_xref="GI:161504854"
+ /db_xref="InterPro:IPR001305"
+ /db_xref="InterPro:IPR001623"
+ /db_xref="InterPro:IPR002939"
+ /db_xref="InterPro:IPR003095"
+ /db_xref="InterPro:IPR008971"
+ /db_xref="InterPro:IPR012724"
+ /translation="MAKRDYYEVLGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAE
+ AKFKEIKAAYEVLTDAQKRAAYDQYGHAAFEQGGMGGGFNGGADFSDIFGDVFGDIFG
+ GGRGRQRAARGADLRYNMDLTLEEAVRGVTKEIRIPTLEECDVCHGSGAKAGTQPQTC
+ PTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCHKCHGHGRVEKSKTLSVKIPAG
+ VDTGDRIRLAGEGEAGEHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAALG
+ GEIEVPTLDGRVKLKVPSETQTGKLFRMRGKGVKSVRGGSQGDLLCRVVVETPVGLSE
+ KQKQLLKDLQESFGGPTGEKNSPRSKSFFDGVKKFFDDLTR"
+ misc_feature complement(2911007..2912119)
+ /locus_tag="SARI_02979"
+ /note="chaperone protein DnaJ; Provisional; Region:
+ PRK10767"
+ /db_xref="CDD:236757"
+ misc_feature complement(2911943..2912107)
+ /locus_tag="SARI_02979"
+ /note="DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock
+ protein 40) proteins are highly conserved and play crucial
+ roles in protein translation, folding, unfolding,
+ translocation, and degradation. They act primarily by
+ stimulating the ATPase activity of Hsp70s; Region: DnaJ;
+ cd06257"
+ /db_xref="CDD:99751"
+ misc_feature complement(order(2911964..2911969,2911976..2911981,
+ 2911988..2911990,2912015..2912023))
+ /locus_tag="SARI_02979"
+ /note="HSP70 interaction site [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99751"
+ misc_feature complement(<2911694..2911777)
+ /locus_tag="SARI_02979"
+ /note="C-terminal substrate binding domain of DnaJ and
+ HSP40; Region: DnaJ_C; cl03262"
+ /db_xref="CDD:243362"
+ misc_feature complement(order(2911706..2911723,2911766..2911768))
+ /locus_tag="SARI_02979"
+ /note="substrate binding site [polypeptide binding]; other
+ site"
+ /db_xref="CDD:199909"
+ misc_feature complement(2911511..2911693)
+ /locus_tag="SARI_02979"
+ /note="Zinc finger domain of DnaJ and HSP40; Region:
+ DnaJ_zf; cd10719"
+ /db_xref="CDD:199908"
+ misc_feature complement(order(2911523..2911525,2911532..2911534,
+ 2911565..2911567,2911574..2911576,2911631..2911633,
+ 2911640..2911642,2911682..2911684,2911691..2911693))
+ /locus_tag="SARI_02979"
+ /note="Zn binding sites [ion binding]; other site"
+ /db_xref="CDD:199908"
+ misc_feature complement(2911124..2911510)
+ /locus_tag="SARI_02979"
+ /note="C-terminal substrate binding domain of DnaJ and
+ HSP40; Region: DnaJ_C; cd10747"
+ /db_xref="CDD:199909"
+ misc_feature complement(order(2911124..2911138,2911226..2911237,
+ 2911295..2911300,2911307..2911312))
+ /locus_tag="SARI_02979"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:199909"
+ unsure 2911988..2912188
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(2912205..2914121)
+ /gene="dnaK"
+ /locus_tag="SARI_02980"
+ CDS complement(2912205..2914121)
+ /gene="dnaK"
+ /locus_tag="SARI_02980"
+ /inference="protein motif:BlastProDom:IPR013126"
+ /inference="protein motif:HMMPanther:IPR001023"
+ /inference="protein motif:HMMPfam:IPR013126"
+ /inference="protein motif:HMMTigr:IPR012725"
+ /inference="protein motif:ScanRegExp:IPR013126"
+ /note="heat shock protein 70; assists in folding of
+ nascent polypeptide chains; refolding of misfolded
+ proteins; utilizes ATPase activity to help fold;
+ co-chaperones are DnaJ and GrpE; multiple copies in some
+ bacteria"
+ /codon_start=1
+ /transl_table=11
+ /product="molecular chaperone DnaK"
+ /protein_id="YP_001571967.1"
+ /db_xref="GI:161504855"
+ /db_xref="InterPro:IPR001023"
+ /db_xref="InterPro:IPR012725"
+ /db_xref="InterPro:IPR013126"
+ /translation="MGKIIGIDLGTTNSCVAIMDGMQARVLENAEGDRTTPSIIAYTQ
+ DGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPYKIIEADNGDAW
+ LDVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRI
+ AGLEVKRIINEPTAAALAYGLDKEVGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEV
+ LATNGDTHLGGEDFDTRLINYLVDEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSA
+ QQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDI
+ NDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLL
+ DVTPLSLGIETMGGVMTPLISKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASD
+ NKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLN
+ EEEIQKMVRDAEANAESDRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIE
+ SALSALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQQHAQQQAGSADASANNAKDD
+ DVVDAEFEEVKDKK"
+ misc_feature complement(2912322..2914121)
+ /gene="dnaK"
+ /locus_tag="SARI_02980"
+ /note="molecular chaperone DnaK; Provisional; Region:
+ dnaK; PRK00290"
+ /db_xref="CDD:234715"
+ misc_feature complement(2913015..2914121)
+ /gene="dnaK"
+ /locus_tag="SARI_02980"
+ /note="Nucleotide-Binding Domain of the sugar
+ kinase/HSP70/actin superfamily; Region:
+ NBD_sugar-kinase_HSP70_actin; cl17037"
+ /db_xref="CDD:247684"
+ misc_feature complement(order(2913099..2913101,2913531..2913542,
+ 2913609..2913611,2914077..2914079,2914083..2914085,
+ 2914089..2914100))
+ /gene="dnaK"
+ /locus_tag="SARI_02980"
+ /note="nucleotide binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:212657"
+ gene complement(2914657..2915178)
+ /locus_tag="SARI_02982"
+ CDS complement(2914657..2915178)
+ /locus_tag="SARI_02982"
+ /inference="similar to AA sequence:INSD:EAQ51898.1"
+ /note="'COG: COG1961 Site-specific recombinases, DNA
+ invertase Pin homologs;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571968.1"
+ /db_xref="GI:161504857"
+ /translation="MKKLYSYIRWSTDKQTGNTSLERQTEKAKQYAAIHGLEYVQILD
+ AGVSAFRGKNTTRGEFYGFINAVKAGVIPSDSWLYVENLDRLTRQDVMTALNLFTSLL
+ KLGLTIVTGMDGKTYTEESVSNNVHDLMMSLFLFSRANEESLTKQKRAFDTTLKLIER
+ HKSGQPTNIKSAG"
+ misc_feature complement(<2914723..2915175)
+ /locus_tag="SARI_02982"
+ /note="Site-specific recombinases, DNA invertase Pin
+ homologs [DNA replication, recombination, and repair];
+ Region: PinR; COG1961"
+ /db_xref="CDD:224872"
+ misc_feature complement(2914732..2915163)
+ /locus_tag="SARI_02982"
+ /note="Serine Recombinase family, catalytic domain; a DNA
+ binding domain may be present either N- or C-terminal to
+ the catalytic domain. These enzymes perform site-specific
+ recombination of DNA molecules by a concerted, four-strand
+ cleavage and rejoining...; Region: Ser_Recombinase;
+ cd00338"
+ /db_xref="CDD:238206"
+ misc_feature complement(order(2914915..2914917,2914924..2914929,
+ 2915146..2915148,2915152..2915154))
+ /locus_tag="SARI_02982"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:238206"
+ misc_feature complement(2915146..2915148)
+ /locus_tag="SARI_02982"
+ /note="catalytic nucleophile [active]"
+ /db_xref="CDD:238206"
+ gene 2915177..2915794
+ /locus_tag="SARI_02981"
+ CDS 2915177..2915794
+ /locus_tag="SARI_02981"
+ /inference="protein motif:BlastProDom:IPR000791"
+ /inference="protein motif:HMMPfam:IPR000791"
+ /inference="protein motif:ScanRegExp:IPR000791"
+ /inference="similar to AA sequence:INSD:AAL18973.1"
+ /note="'COG: COG1584 Predicted membrane protein;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571969.1"
+ /db_xref="GI:161504856"
+ /db_xref="InterPro:IPR000791"
+ /translation="MANTENNKHSESITFSNLGNTKLANPAPLGLMGFGMTTILLNLH
+ NAGFFALDGIILAMGIFYGGIAQIFAGLLEYKKGNTFGLTAFTSYGSFWLTLVAILLM
+ PKMGLTDAPDAQLLGAYLGLWGVFTLFMFFGTLKAARALQFVFLSLTVLFALLAVGNI
+ TDNEAIIHVAGWVGLVCGASAIYLAMGEVLNEHFGRTILPIGEAH"
+ misc_feature 2915228..2915791
+ /locus_tag="SARI_02981"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10659"
+ /db_xref="CDD:182625"
+ gene complement(2915877..2916467)
+ /gene="mogA"
+ /locus_tag="SARI_02983"
+ CDS complement(2915877..2916467)
+ /gene="mogA"
+ /locus_tag="SARI_02983"
+ /inference="protein motif:HMMPfam:IPR001453"
+ /inference="protein motif:HMMPIR:IPR012119"
+ /inference="protein motif:HMMTigr:IPR001453"
+ /inference="protein motif:ScanRegExp:IPR008284"
+ /inference="protein motif:superfamily:IPR001453"
+ /inference="similar to AA sequence:REFSEQ:YP_214995.1"
+ /note="forms a trimer; related to eukaryotic protein
+ gephyrin; functions during molybdenum cofactor
+ biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="molybdenum cofactor biosynthesis protein MogA"
+ /protein_id="YP_001571970.1"
+ /db_xref="GI:161504858"
+ /db_xref="InterPro:IPR001453"
+ /db_xref="InterPro:IPR008284"
+ /db_xref="InterPro:IPR012119"
+ /translation="MNTLRIGLVSISDRASNGVYQDKGIPALEEWLACALTTPFEVQR
+ RLIPDEQEIIEQTLCELVDEMSCHLVLTTGGTGPARRDVTPDATLAIADREMPGFGEQ
+ MRQISLRFVPTAILSRQVGVIRKQALILNLPGQPKSIKETLEGVKADDGSVIVPGIFA
+ SVPYCVQLLDGPYVETAPEVVASFRPKSARRENISA"
+ misc_feature complement(2915961..2916458)
+ /gene="mogA"
+ /locus_tag="SARI_02983"
+ /note="MogA_MoaB family. Members of this family are
+ involved in biosynthesis of the molybdenum cofactor (MoCF)
+ an essential cofactor of a diverse group of redox enzymes.
+ MoCF biosynthesis is an evolutionarily conserved pathway
+ present in eubacteria, archaea; Region: MogA_MoaB;
+ cd00886"
+ /db_xref="CDD:238451"
+ misc_feature complement(order(2916045..2916047,2916054..2916056,
+ 2916066..2916071,2916147..2916149,2916237..2916245))
+ /gene="mogA"
+ /locus_tag="SARI_02983"
+ /note="MPT binding site; other site"
+ /db_xref="CDD:238451"
+ misc_feature complement(order(2915961..2915963,2916114..2916116,
+ 2916123..2916125,2916153..2916158,2916165..2916167,
+ 2916180..2916188,2916210..2916212,2916222..2916224,
+ 2916228..2916233,2916237..2916239))
+ /gene="mogA"
+ /locus_tag="SARI_02983"
+ /note="trimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238451"
+ gene 2916494..2916886
+ /locus_tag="SARI_02984"
+ CDS 2916494..2916886
+ /locus_tag="SARI_02984"
+ /inference="protein motif:HMMPfam:IPR006842"
+ /note="'COG: COG5464 Uncharacterized conserved protein;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571971.1"
+ /db_xref="GI:161504859"
+ /db_xref="InterPro:IPR006842"
+ /translation="MQNHTREWTVILNPRTGKPLVIPGRAAKPKSQFTIRYSAGSDGS
+ LRTNTSREGRICEKTGHLYREIQDARALLFEMAQRAPQYGDEPRTLAEQLKQEGCIEG
+ MQTGEREASCTMARTMLEKASRKPMSLK"
+ misc_feature <2916626..2916856
+ /locus_tag="SARI_02984"
+ /note="Uncharacterized conserved protein [Function
+ unknown]; Region: COG5464"
+ /db_xref="CDD:227751"
+ gene complement(2916976..2917929)
+ /locus_tag="SARI_02985"
+ CDS complement(2916976..2917929)
+ /locus_tag="SARI_02985"
+ /inference="protein motif:Gene3D:IPR013785"
+ /inference="protein motif:HMMPanther:IPR001585"
+ /inference="protein motif:HMMPfam:IPR001585"
+ /inference="protein motif:HMMTigr:IPR004730"
+ /inference="protein motif:ScanRegExp:IPR001585"
+ /inference="similar to AA sequence:SwissProt:P66955"
+ /note="'KEGG: stt:t0007 1.3e-163 talB; transaldolase B
+ K00616;
+ COG: COG0176 Transaldolase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="transaldolase B"
+ /protein_id="YP_001571972.1"
+ /db_xref="GI:161504860"
+ /db_xref="InterPro:IPR001585"
+ /db_xref="InterPro:IPR004730"
+ /db_xref="InterPro:IPR013785"
+ /translation="MTDKLTSLRQFTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQ
+ IPEYRKLIDDAVAWAKQQSSDRAQQVVDATDKLAVNIGLEILKLVPGRISTEVDARLS
+ YDTEASIAKAKRIIKLYNDAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFS
+ FAQARACAEAGVYLISPFVGRILDWYKANTDKKDYAPAEDPGVVSVTEIYEYYKQHGY
+ ETVVMGASFRNVGEILELAGCDRLTIAPALLKELAESEGAIERKLSFSGEVKARPERI
+ TEAEFLWQHNQDPMAVDKLADGIRKFAVDQEKLEKMIGDLL"
+ misc_feature complement(2916979..2917929)
+ /locus_tag="SARI_02985"
+ /note="transaldolase-like protein; Provisional; Region:
+ PTZ00411"
+ /db_xref="CDD:240406"
+ misc_feature complement(2916991..2917920)
+ /locus_tag="SARI_02985"
+ /note="Transaldolases including both TalA and TalB;
+ Region: Transaldolase_TalAB; cd00957"
+ /db_xref="CDD:188644"
+ misc_feature complement(order(2917387..2917389,2917402..2917404,
+ 2917462..2917464,2917468..2917470,2917534..2917536,
+ 2917642..2917644,2917648..2917650,2917822..2917827,
+ 2917831..2917833,2917879..2917881))
+ /locus_tag="SARI_02985"
+ /note="active site"
+ /db_xref="CDD:188644"
+ misc_feature complement(order(2917030..2917032,2917042..2917044,
+ 2917051..2917053,2917069..2917074,2917084..2917086,
+ 2917093..2917095,2917618..2917620))
+ /locus_tag="SARI_02985"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:188644"
+ misc_feature complement(2917534..2917536)
+ /locus_tag="SARI_02985"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:188644"
+ gene 2918192..2919628
+ /locus_tag="SARI_02986"
+ CDS 2918192..2919628
+ /locus_tag="SARI_02986"
+ /inference="protein motif:HMMPfam:IPR001463"
+ /inference="protein motif:HMMTigr:IPR001463"
+ /inference="protein motif:ScanRegExp:IPR001463"
+ /inference="similar to AA sequence:REFSEQ:NP_454616.1"
+ /note="'KEGG: hpa:HPAG1_0925 4.5e-65 D-alanine glycine
+ permease K01613;
+ COG: COG1115 Na+/alanine symporter;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571973.1"
+ /db_xref="GI:161504861"
+ /db_xref="InterPro:IPR001463"
+ /translation="MLMPEFFSFINEVLWGSVMIYLLLGAGCWFTWHTGFIQFRYIRQ
+ FSRSLKGSFSPQPGGLTSFQALCTSLAARIGSGNLAGVSLAIAAGGPGAVFWMWVSAI
+ IGMATSFAECSLAQLYKERDPAGQFRGGPAWYMARGLGMRWMGVVFALFLLVAYGVIF
+ NSVQANSVSRALHFAFNIPPFISGIVLAFCLLLIIIRGIKGVARLMQWLIPIIALLWI
+ TSSVFICLWHIEQMPEVIASIVKSAFGWQEAAAGAAGYTLTQAITCGFQRGMFSNEAG
+ MGSTPNAAAAAASYPPHPVAQGIVQMIGVFSDTIIICTASAMIILLAGNHTSHSSTEG
+ IQLILHAMVSLTGEWGASFVALMVILFAFSSIVANYIYAENNLFFLRLHNAKMIWLLR
+ LATIGMVVAGALLSFPLVWQLADVIMACMAITNLTAILLLSPVVHTLARDYLRQRKLG
+ VRPQFDPQRFPDIEPQLAPDTWDASLRD"
+ misc_feature 2918192..2919544
+ /locus_tag="SARI_02986"
+ /note="Na+/alanine symporter [Amino acid transport and
+ metabolism]; Region: AlsT; COG1115"
+ /db_xref="CDD:224040"
+ misc_feature 2918351..2919571
+ /locus_tag="SARI_02986"
+ /note="Sodium:alanine symporter family; Region:
+ Na_Ala_symp; pfam01235"
+ /db_xref="CDD:216380"
+ gene 2919707..2920480
+ /locus_tag="SARI_02987"
+ CDS 2919707..2920480
+ /locus_tag="SARI_02987"
+ /inference="protein motif:HMMPfam:IPR005583"
+ /inference="similar to AA sequence:INSD:AAL18969.1"
+ /note="'COG: COG3022 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571974.1"
+ /db_xref="GI:161504862"
+ /db_xref="InterPro:IPR005583"
+ /translation="MLILISPAKTLDYQSPLATTRYTQPELLDHSQQLIHQVRQLSAP
+ QIARLMGISDKLADLNATRFHDWQPHFTPDNARQAILAFKGDVYTGLQAETFSDADFD
+ FAQQHLRMLSGLYGLLRPLDLMQPYRLEMGIRLENPRGKDLYQFWGDIITDKLNETLA
+ SQGDRVVINLASEEYFKSVKPKKLNAELIKPVFLDEKNGKFKVISFYAKKARGLMSRF
+ IIENRLTKPEQLTAFNSEGYFFDEETSTQDELVFKRYEQ"
+ misc_feature 2919707..2920477
+ /locus_tag="SARI_02987"
+ /note="hypothetical protein; Validated; Region: PRK02101"
+ /db_xref="CDD:234999"
+ gene complement(2920570..2921856)
+ /locus_tag="SARI_02988"
+ CDS complement(2920570..2921856)
+ /locus_tag="SARI_02988"
+ /inference="protein motif:HMMPfam:IPR001926"
+ /inference="protein motif:HMMTigr:IPR004450"
+ /inference="protein motif:ScanRegExp:IPR000634"
+ /inference="similar to AA sequence:INSD:AAL18968.1"
+ /note="catalyzes the formation of L-threonine from
+ O-phospho-L-homoserine"
+ /codon_start=1
+ /transl_table=11
+ /product="threonine synthase"
+ /protein_id="YP_001571975.1"
+ /db_xref="GI:161504863"
+ /db_xref="InterPro:IPR000634"
+ /db_xref="InterPro:IPR001926"
+ /db_xref="InterPro:IPR004450"
+ /translation="MKLYNLKDHNEQVSFAQAVTQGLGKQQGLFFPHDLPEFSLTEID
+ EMLNQDFVSRSAKILSAFIGDEIPQEILEERIRAAFAFPAPVAQVESDVGCLELFHGP
+ TLAFKDFGGRFMAQMLTHISGDKPVTILTATSGDTGAAVAHAFYGLENVRVVILYPRG
+ KISPLQEKLFCTLGGNIETVAIDGDFDACQALVKQAFDDEELKTTLGLNSANSINISR
+ LLAQICYYFEAVAQLPQGARNQLVISVPSGNFGDLTAGLLAKSLGLSVKRFIAATNVN
+ DTVPRFLRDGKWAPKATQATLSNAMDVSQPNNWPRVEELFRRKVWRLTELGYAAIDDA
+ TTQQTMCELKAKGYTSEPHAAVAYRALRDQLNPGEYGLFLGTAHPAKFKESVESILGE
+ TLALPEALAERADLPLLSHHLPANFAALRKLMMARQ"
+ misc_feature complement(2920579..2921856)
+ /locus_tag="SARI_02988"
+ /note="Threonine synthase [Amino acid transport and
+ metabolism]; Region: ThrC; COG0498"
+ /db_xref="CDD:223572"
+ misc_feature complement(2920588..2921853)
+ /locus_tag="SARI_02988"
+ /note="Threonine synthase catalyzes the final step of
+ threonine biosynthesis. The conversion of
+ O-phosphohomoserine into threonine and inorganic phosphate
+ is pyridoxal 5'-phosphate dependent. The Thr-synth_1
+ CD includes members from higher plants; Region:
+ Thr-synth_2; cd01560"
+ /db_xref="CDD:107203"
+ misc_feature complement(order(2920729..2920731,2921110..2921115,
+ 2921536..2921538))
+ /locus_tag="SARI_02988"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:107203"
+ misc_feature complement(2921536..2921538)
+ /locus_tag="SARI_02988"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:107203"
+ gene complement(2921860..2922789)
+ /locus_tag="SARI_02989"
+ CDS complement(2921860..2922789)
+ /locus_tag="SARI_02989"
+ /inference="protein motif:HMMPfam:IPR006204"
+ /inference="protein motif:HMMPfam:IPR013750"
+ /inference="protein motif:HMMPIR:IPR000870"
+ /inference="protein motif:HMMTigr:IPR000870"
+ /inference="protein motif:ScanRegExp:IPR006203"
+ /inference="similar to AA sequence:INSD:"
+ /note="catalyzes the formation of O-phospho-L-homoserine
+ from L-homoserine in threonine biosynthesis from asparate"
+ /codon_start=1
+ /transl_table=11
+ /product="homoserine kinase"
+ /protein_id="YP_001571976.1"
+ /db_xref="GI:161504864"
+ /db_xref="InterPro:IPR000870"
+ /db_xref="InterPro:IPR006203"
+ /db_xref="InterPro:IPR006204"
+ /db_xref="InterPro:IPR013750"
+ /translation="MVKVYAPASSANMSVGFDVLGAAVTPVDGALLGDVVSVEAADSF
+ SLNNLGRFADKLPPEPRENIVYQCWERFCHALGKTIPVAMTLEKNMPIGSGLGSSACS
+ VVAALVAMNEHCGKPLNDTRLLAMMGELEGRISGSVHYDNVAPCFLGGMQLMIEENGI
+ ISQQIPGFDEWLWVLAYPGIKVSTAEARAILPAQYRRQDCIAHGRHLAGFIHACYSRQ
+ PQLAAALMKDVIAEPYRARLLPGFSQARQAVAEIGALASGISGSGPTLFALCDKPETA
+ QRVADWLSKHYLQNQEGFVHICRLDTAGARVLG"
+ misc_feature complement(2921866..2922789)
+ /locus_tag="SARI_02989"
+ /note="homoserine kinase; Provisional; Region: PRK01212"
+ /db_xref="CDD:234920"
+ misc_feature complement(2922340..2922540)
+ /locus_tag="SARI_02989"
+ /note="GHMP kinases N terminal domain; Region:
+ GHMP_kinases_N; pfam00288"
+ /db_xref="CDD:215839"
+ gene complement(2922791..2925253)
+ /gene="thrA"
+ /locus_tag="SARI_02990"
+ CDS complement(2922791..2925253)
+ /gene="thrA"
+ /locus_tag="SARI_02990"
+ /inference="protein motif:Gene3D:IPR001048"
+ /inference="protein motif:HMMPfam:IPR001048"
+ /inference="protein motif:HMMPfam:IPR001342"
+ /inference="protein motif:HMMPfam:IPR002912"
+ /inference="protein motif:HMMPfam:IPR005106"
+ /inference="protein motif:HMMPIR:IPR011147"
+ /inference="protein motif:HMMTigr:IPR001341"
+ /inference="protein motif:ScanRegExp:IPR001341"
+ /inference="protein motif:ScanRegExp:IPR001342"
+ /inference="protein motif:superfamily:IPR001048"
+ /note="multifunctional homotetrameric enzyme that
+ catalyzes the phosphorylation of aspartate to form
+ aspartyl-4-phosphate as well as conversion of aspartate
+ semialdehyde to homoserine; functions in a number of amino
+ acid biosynthetic pathways"
+ /codon_start=1
+ /transl_table=11
+ /product="bifunctional aspartokinase I/homoserine
+ dehydrogenase I"
+ /protein_id="YP_001571977.1"
+ /db_xref="GI:161504865"
+ /db_xref="InterPro:IPR001048"
+ /db_xref="InterPro:IPR001341"
+ /db_xref="InterPro:IPR001342"
+ /db_xref="InterPro:IPR002912"
+ /db_xref="InterPro:IPR005106"
+ /db_xref="InterPro:IPR011147"
+ /translation="MRVLKFGGTSVANAERFLRVADILESNARQGQVATVLSAPAKIT
+ NHLVAMIEKTIGGQDALPNISDAERIFSDLLAGLANAQPGFPLARLKMVVEQEFAQIK
+ HVLHGISLLGQCPDSINAALICRGEKMSIAIMAGLLEARGHRVTVIDPVEKLLAVGHY
+ LESTVDIAESTRRIAASQIPFDHMILMAGFTAGNEKGELVVLGRNGSDYSAAVLAACL
+ RADCCEIWTDVDGVYTCDPRQVPDARLLKAMSYQEAMELSYFGAKVLHPRTITPIAQF
+ QIPCLIKNTGNPQAPGTLIGATCDDDDLPVKGISNLNNMAMFSVSGPGMKGMVGMAAR
+ VFAAMSRAGISVVLITQSSSEYSISFCVPQSDSAHARRAMQDEFYLELKEGLLEPLAV
+ TERLAIISVVGDGMRTLRGISAKFFAALARANINIVAIAQGSSERSISVVVNNDDATT
+ GVRVTHQMLFNTDQVIEVFVIGVGGVGGALLEQLKRQQSWLKNKHIDLRVCGVANSKA
+ LLTNVHGLNLENWQAELAQANAPFNLGRLIRLVKEYHLLNPVIVDCTSSQAVADQYAD
+ FLREGFHVVTPNKKANTSSMDYYHQLRFAAAKSRRKFLYDTNVGAGLPVIENLQNLLN
+ AGDELQKFSGILSGSLSFIFGKLEEGMNLSQATALAREMGYTEPDPRDDLSGMDVARK
+ LLILARETGRELELSDIVIEPVLPDGFDASGDVTAFMTNLSLLDDTFAARVAKARDEG
+ KVLRYVGNIEEDSVCRVKIAEVDGNDPLFKVKNGENALAFYSHYYQPLPLVLRGYGAG
+ NDVTAAGVFADLLRTLSWKLGV"
+ misc_feature complement(2922794..2925253)
+ /gene="thrA"
+ /locus_tag="SARI_02990"
+ /note="bifunctional aspartokinase I/homoserine
+ dehydrogenase I; Provisional; Region: thrA; PRK09436"
+ /db_xref="CDD:181856"
+ misc_feature complement(2924366..2925253)
+ /gene="thrA"
+ /locus_tag="SARI_02990"
+ /note="AAK_AK-HSDH: Amino Acid Kinase Superfamily (AAK),
+ AK-HSDH; this CD includes the N-terminal catalytic domain
+ of aspartokinase (AK) of the bifunctional enzyme AK -
+ homoserine dehydrogenase (HSDH). These aspartokinases are
+ found in bacteria (E. coli...; Region: AAK_AK-HSDH;
+ cd04257"
+ /db_xref="CDD:239790"
+ misc_feature complement(order(2924456..2924458,2924495..2924497,
+ 2924630..2924632,2924873..2924875,2925122..2925124,
+ 2925239..2925241))
+ /gene="thrA"
+ /locus_tag="SARI_02990"
+ /note="putative catalytic residues [active]"
+ /db_xref="CDD:239790"
+ misc_feature complement(order(2924555..2924560,2924567..2924572,
+ 2925227..2925235,2925239..2925241))
+ /gene="thrA"
+ /locus_tag="SARI_02990"
+ /note="putative nucleotide binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:239790"
+ misc_feature complement(order(2924873..2924875,2925122..2925124,
+ 2925137..2925142))
+ /gene="thrA"
+ /locus_tag="SARI_02990"
+ /note="putative aspartate binding site [chemical binding];
+ other site"
+ /db_xref="CDD:239790"
+ misc_feature complement(2924072..2924311)
+ /gene="thrA"
+ /locus_tag="SARI_02990"
+ /note="ACT domains of the bifunctional enzyme
+ aspartokinase (AK) - homoserine dehydrogenase (HSDH);
+ Region: ACT_AKi-HSDH-ThrA-like_1; cd04921"
+ /db_xref="CDD:153193"
+ misc_feature complement(order(2924177..2924179,2924183..2924185,
+ 2924189..2924194,2924198..2924218,2924222..2924224,
+ 2924243..2924248,2924255..2924257,2924267..2924272,
+ 2924279..2924287))
+ /gene="thrA"
+ /locus_tag="SARI_02990"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:153193"
+ misc_feature complement(2924201..2924203)
+ /gene="thrA"
+ /locus_tag="SARI_02990"
+ /note="putative threonine allosteric regulatory site;
+ other site"
+ /db_xref="CDD:153193"
+ misc_feature complement(2923871..2924068)
+ /gene="thrA"
+ /locus_tag="SARI_02990"
+ /note="ACT domains of the bifunctional enzyme
+ aspartokinase (AK) - homoserine dehydrogenase (HSDH);
+ Region: ACT_AKi-HSDH-ThrA_2; cd04922"
+ /db_xref="CDD:153194"
+ misc_feature complement(2923958..2923960)
+ /gene="thrA"
+ /locus_tag="SARI_02990"
+ /note="putative threonine allosteric regulatory site;
+ other site"
+ /db_xref="CDD:153194"
+ misc_feature complement(2923439..2923819)
+ /gene="thrA"
+ /locus_tag="SARI_02990"
+ /note="Homoserine dehydrogenase, NAD binding domain;
+ Region: NAD_binding_3; pfam03447"
+ /db_xref="CDD:217564"
+ misc_feature complement(2922824..2923414)
+ /gene="thrA"
+ /locus_tag="SARI_02990"
+ /note="Homoserine dehydrogenase; Region: Homoserine_dh;
+ pfam00742"
+ /db_xref="CDD:216092"
+ misc_feature complement(2925279..2925406)
+ /inference="nucleotide motif:Rfam:RF00506"
+ /note="threonine operon leader"
+ gene complement(2925614..2926300)
+ /locus_tag="SARI_02991"
+ CDS complement(2925614..2926300)
+ /locus_tag="SARI_02991"
+ /inference="protein motif:HMMPfam:IPR001537"
+ /inference="protein motif:HMMTigr:IPR004384"
+ /inference="similar to AA sequence:REFSEQ:YP_153444.1"
+ /note="member of the SPOUT superfamily of
+ methyltransferases"
+ /codon_start=1
+ /transl_table=11
+ /product="putative RNA methyltransferase"
+ /protein_id="YP_001571978.1"
+ /db_xref="GI:161504866"
+ /db_xref="InterPro:IPR001537"
+ /db_xref="InterPro:IPR004384"
+ /translation="MRVTIVLVAPARAENIGAAARAMKTMGFTDLRIVDSQAHLEPAT
+ RWVAHGSGDIIDNIAVFHTLADALHDVDFTVATTARSRAKFHYYASPAELVPLLQEKS
+ RWMRHAALVFGREDSGLTNDELALADVLTGVPMAADYPSLNLGQAVMVYCYQLAGLMQ
+ QTTESVDIADGSQLQALRARLLRLLTTLEAADDHKLTDWLQQRIGLLGQRDTVMLHRL
+ VHDIEKKLTK"
+ misc_feature complement(2925617..2926300)
+ /locus_tag="SARI_02991"
+ /note="rRNA methylase [Translation, ribosomal structure
+ and biogenesis]; Region: LasT; COG0565"
+ /db_xref="CDD:223639"
+ misc_feature complement(2925617..2926300)
+ /locus_tag="SARI_02991"
+ /note="putative RNA methyltransferase; Provisional;
+ Region: PRK10433"
+ /db_xref="CDD:236693"
+ gene 2926936..2927652
+ /locus_tag="SARI_02992"
+ CDS 2926936..2927652
+ /locus_tag="SARI_02992"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:BlastProDom:IPR001867"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR001789"
+ /inference="protein motif:HMMPfam:IPR001867"
+ /inference="protein motif:HMMSmart:IPR001789"
+ /inference="protein motif:superfamily:IPR011006"
+ /inference="similar to AA sequence:INSD:AAO72066.1"
+ /note="'KEGG: eci:UTI89_C5174 6.1e-125 arcA; ArcA
+ transcriptional dual regulator K07773;
+ COG: COG0745 Response regulators consisting of a CheY-like
+ receiver domain and a winged-helix DNA-binding domain;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="two-component response regulator"
+ /protein_id="YP_001571979.1"
+ /db_xref="GI:161504867"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR001867"
+ /db_xref="InterPro:IPR011006"
+ /db_xref="InterPro:IPR011991"
+ /translation="MQTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILS
+ EYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDNEVDKILGLEIGADDYIT
+ KPFNPRELTIRARNLLSRTMNLGTVSEERRSVESYKFNGWELDINSRSLIGPDGEQYK
+ LPRSEFRAMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDT
+ PEIIATIHGEGYRFCGDLQD"
+ misc_feature 2926936..2927646
+ /locus_tag="SARI_02992"
+ /note="two-component response regulator; Provisional;
+ Region: PRK11173"
+ /db_xref="CDD:183013"
+ misc_feature 2926954..2927289
+ /locus_tag="SARI_02992"
+ /note="Signal receiver domain; originally thought to be
+ unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
+ recently identified in eukaroytes ETR1 Arabidopsis
+ thaliana; this domain receives the signal from the sensor
+ partner in a two-component systems; Region: REC; cd00156"
+ /db_xref="CDD:238088"
+ misc_feature order(2926963..2926968,2927095..2927097,2927119..2927121,
+ 2927176..2927178,2927233..2927235,2927242..2927247)
+ /locus_tag="SARI_02992"
+ /note="active site"
+ /db_xref="CDD:238088"
+ misc_feature 2927095..2927097
+ /locus_tag="SARI_02992"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238088"
+ misc_feature order(2927104..2927109,2927113..2927121)
+ /locus_tag="SARI_02992"
+ /note="intermolecular recognition site; other site"
+ /db_xref="CDD:238088"
+ misc_feature 2927242..2927250
+ /locus_tag="SARI_02992"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238088"
+ misc_feature 2927344..2927631
+ /locus_tag="SARI_02992"
+ /note="Effector domain of response regulator. Bacteria and
+ certain eukaryotes like protozoa and higher plants use
+ two-component signal transduction systems to detect and
+ respond to changes in the environment. The system consists
+ of a sensor histidine kinase and...; Region: trans_reg_C;
+ cd00383"
+ /db_xref="CDD:238225"
+ misc_feature order(2927419..2927421,2927476..2927481,2927533..2927535,
+ 2927542..2927544,2927566..2927571,2927605..2927607,
+ 2927620..2927622)
+ /locus_tag="SARI_02992"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:238225"
+ gene 2927819..2927998
+ /locus_tag="SARI_02993"
+ CDS 2927819..2927998
+ /locus_tag="SARI_02993"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571980.1"
+ /db_xref="GI:161504868"
+ /translation="MDIQVPDSGFFTDSCQSIKIELFTHTITMNMSTTLKISARYCNS
+ DYRASECHGNIKPDL"
+ misc_feature <2927819..2927941
+ /locus_tag="SARI_02993"
+ /note="putative major fimbrial protein SthE; Provisional;
+ Region: PRK15292"
+ /db_xref="CDD:237935"
+ gene complement(2928067..2928180)
+ /locus_tag="SARI_02994"
+ CDS complement(2928067..2928180)
+ /locus_tag="SARI_02994"
+ /inference="protein motif:HMMPfam:IPR010364"
+ /note="'COG: COG4452 Inner membrane protein involved in
+ colicin E2 resistance;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571981.1"
+ /db_xref="GI:161504869"
+ /db_xref="InterPro:IPR010364"
+ /translation="MRIGMRLLLALSGVMFLTRHLDWYSLSYLQRKAMPPV"
+ misc_feature complement(2928070..>2928162)
+ /locus_tag="SARI_02994"
+ /note="Inner membrane protein CreD; Region: CreD; cl01844"
+ /db_xref="CDD:242742"
+ gene complement(2928183..2928801)
+ /locus_tag="SARI_02995"
+ /note="Pseudogene compared to gi|16767829|ref|NP_463444.1|
+ response regulator [Salmonella typhimurium LT2]"
+ gene complement(2928869..2929354)
+ /locus_tag="SARI_02996"
+ CDS complement(2928869..2929354)
+ /locus_tag="SARI_02996"
+ /inference="protein motif:HMMPfam:IPR010292"
+ /inference="similar to AA sequence:INSD:AAL23402.1"
+ /note="'COG: COG3045 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571982.1"
+ /db_xref="GI:161504870"
+ /db_xref="InterPro:IPR010292"
+ /translation="MNGNNMKYKSLVLFSILLMLGQSARAEQIGSVDTVFKMFGPDHK
+ IVVEAFDDPDVKNVTCYVSRAKTGGIKGGLGLAEDTSDAAISCQQVGPIELSDKIKNG
+ KAQGEVVFKKRTSLIFKSLQVVRFYDEKRNTLAYLAYSDKVVEGSPKNAISAVPVMPW
+ R"
+ misc_feature complement(2928872..2929339)
+ /locus_tag="SARI_02996"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10756"
+ /db_xref="CDD:236752"
+ misc_feature complement(2928872..2929270)
+ /locus_tag="SARI_02996"
+ /note="CreA protein; Region: CreA; pfam05981"
+ /db_xref="CDD:218837"
+ gene 2929552..2930421
+ /locus_tag="SARI_02997"
+ CDS 2929552..2930421
+ /locus_tag="SARI_02997"
+ /inference="protein motif:FPrintScan:IPR000005"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR000005"
+ /inference="protein motif:HMMPfam:IPR010499"
+ /inference="protein motif:HMMSmart:IPR000005"
+ /inference="protein motif:ScanRegExp:IPR000005"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="protein motif:superfamily:IPR011256"
+ /inference="similar to AA sequence:INSD:AAV80119.1"
+ /note="'KEGG: bat:BAS3585 2.2e-08 Ada regulatory
+ protein/6-O-methylguanine-DNA methyltransferase K00567;
+ COG: COG2207 AraC-type DNA-binding domain-containing
+ proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571983.1"
+ /db_xref="GI:161504871"
+ /db_xref="InterPro:IPR000005"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR010499"
+ /db_xref="InterPro:IPR011256"
+ /db_xref="InterPro:IPR012287"
+ /translation="MDQAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKD
+ VTGHAIGAYIRARRLSKSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFSQTPAL
+ YRRSPEWSAFGIRPPLRLGEFTVPEHQFVTLEDTQLLGVTQSYSCSLEQISDFRHEMR
+ VQFWHDFLGHSPTIPPVLYGLNETRPSLEKDDEQEVFYTTALPQEQADGYVQSAHPVL
+ LQGGEYVMFTYEGLGTGVQDFILTVYGTCMPMLNLTRRKGQDIERYYPSEDAKTGDRP
+ INLRCEFLIPIRR"
+ misc_feature 2929552..2930418
+ /locus_tag="SARI_02997"
+ /note="right oriC-binding transcriptional activator;
+ Provisional; Region: PRK15121"
+ /db_xref="CDD:185076"
+ misc_feature <2929765..2929866
+ /locus_tag="SARI_02997"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ misc_feature 2929927..2930415
+ /locus_tag="SARI_02997"
+ /note="GyrI-like small molecule binding domain; Region:
+ GyrI-like; pfam06445"
+ /db_xref="CDD:219032"
+ gene complement(2930418..2931065)
+ /locus_tag="SARI_02998"
+ CDS complement(2930418..2931065)
+ /locus_tag="SARI_02998"
+ /inference="protein motif:HMMPfam:IPR013078"
+ /inference="protein motif:ScanRegExp:IPR001345"
+ /inference="similar to AA sequence:SwissProt:Q8ZJU8"
+ /note="catalyzes reactions involving the transfer of
+ phospho groups between the three carbon atoms of
+ phosphoglycerate"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphoglycerate mutase"
+ /protein_id="YP_001571984.1"
+ /db_xref="GI:161504872"
+ /db_xref="InterPro:IPR001345"
+ /db_xref="InterPro:IPR013078"
+ /translation="MLQVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVGERAR
+ SLGITHIISSDLGRTKRTAEIIAQACGCDITFDSRLRELDMGVLEKRQIDSLTEEEEG
+ WRRQLVNGTQDGRIPDGESMQELSERVHAALASCLELPQGSRPLLVSHGIALGCLVST
+ ILGLPAWAERRLRLRNCSISRVDYQESQWLASGWVVETAGDVSHLDAPALDELQR"
+ misc_feature complement(2930508..2931059)
+ /locus_tag="SARI_02998"
+ /note="Histidine phosphatase domain found in
+ phosphoglycerate mutases and related proteins, mostly
+ phosphatases; contains a His residue which is
+ phosphorylated during the reaction; Region: HP_PGM_like;
+ cd07067"
+ /db_xref="CDD:132718"
+ misc_feature complement(order(2930613..2930618,2930892..2930894,
+ 2931039..2931044))
+ /locus_tag="SARI_02998"
+ /note="catalytic core [active]"
+ /db_xref="CDD:132718"
+ gene 2931114..2931629
+ /locus_tag="SARI_02999"
+ CDS 2931114..2931629
+ /locus_tag="SARI_02999"
+ /inference="protein motif:BlastProDom:IPR002786"
+ /inference="protein motif:HMMPfam:IPR002786"
+ /inference="protein motif:HMMTigr:IPR002786"
+ /inference="similar to AA sequence:REFSEQ:YP_153429.1"
+ /note="pyrophosphatase; has activity against dUTP and
+ dITP; the crystal structure of the Vibrio protein showed
+ similarity to Methanococcus janaschii Mj0226; in Vibrio
+ cholerae this gene is part of the Mba operon that is
+ involved in regulation and maintenance of biofilms; in
+ Escherichia coli overexpression of this gene leads to
+ resistance to an HMP analog"
+ /codon_start=1
+ /transl_table=11
+ /product="NTPase"
+ /protein_id="YP_001571985.1"
+ /db_xref="GI:161504873"
+ /db_xref="InterPro:IPR002786"
+ /translation="MHQVISATTNPAKIQAILQAFEEIFGEGSCHITPIAVESGVPEQ
+ PFGSEETRTGARNRVANARLLCPEADFWVAIEAGIDDNSTFSWVVIESVELRGESRSA
+ TLPLPAVILENVRAGDALGPVMSRYTGIDEIGRKEGAIGIFTAGKLTRSSVYHQAVIL
+ ALSPFHNAVYR"
+ misc_feature 2931114..2931626
+ /locus_tag="SARI_02999"
+ /note="inosine/xanthosine triphosphatase; Reviewed;
+ Region: PRK05074"
+ /db_xref="CDD:235336"
+ gene complement(2931733..2932059)
+ /locus_tag="SARI_03000"
+ CDS complement(2931733..2932059)
+ /locus_tag="SARI_03000"
+ /inference="protein motif:BlastProDom:IPR013335"
+ /inference="protein motif:Gene3D:IPR013318"
+ /inference="protein motif:HMMPfam:IPR000831"
+ /inference="protein motif:HMMTigr:IPR013335"
+ /inference="protein motif:superfamily:IPR010921"
+ /inference="similar to AA sequence:SwissProt:P39439"
+ /note="When complexed with L-tryptophan it binds the
+ operator region of the trp operon and prevents the
+ initiation of transcription"
+ /codon_start=1
+ /transl_table=11
+ /product="Trp operon repressor"
+ /protein_id="YP_001571986.1"
+ /db_xref="GI:161504874"
+ /db_xref="InterPro:IPR000831"
+ /db_xref="InterPro:IPR010921"
+ /db_xref="InterPro:IPR013318"
+ /db_xref="InterPro:IPR013335"
+ /translation="MTQQSPYSAAMAEQRHQEWLRFVELLKQSYAEDLHIPLLNLMLT
+ PDEREALGTRVRIIEELLRGEMSQRELKNELGAGIATITRGSNSLKSAPVELRQWLDQ
+ VLLKEA"
+ misc_feature complement(2931736..2932029)
+ /locus_tag="SARI_03000"
+ /note="Trp operon repressor; Provisional; Region:
+ PRK01381"
+ /db_xref="CDD:179289"
+ gene complement(2932147..2934120)
+ /locus_tag="SARI_03001"
+ CDS complement(2932147..2934120)
+ /locus_tag="SARI_03001"
+ /inference="protein motif:Gene3D:IPR008939"
+ /inference="protein motif:Gene3D:IPR012289"
+ /inference="protein motif:HMMPfam:IPR008258"
+ /inference="protein motif:ScanRegExp:IPR000189"
+ /note="catalyzes the cleavage of the glycosidic bonds
+ between N-acetylmuramic acid and N-acetylglucosamine
+ residues in peptidoglycan"
+ /codon_start=1
+ /transl_table=11
+ /product="lytic murein transglycosylase"
+ /protein_id="YP_001571987.1"
+ /db_xref="GI:161504875"
+ /db_xref="InterPro:IPR000189"
+ /db_xref="InterPro:IPR008258"
+ /db_xref="InterPro:IPR008939"
+ /db_xref="InterPro:IPR012289"
+ /translation="MKLHWITIEEVLVDRAKPFAWRLIAASVCLLTFCHLARADSLEE
+ QRNRYAQIKQAWDNRQMDVVEQMMPGLKDYPLYPYLEYRQITDDLMNQPTITVTNFVR
+ ANPTLPPARTLQSRFVNELARREDWRGLLAFSPEKPGTTEAQCNYYYAKWITGQTEEA
+ WLGAKALWLTGKSQPNACDKLFSVWRASGKQDPLAYLERIRLAMKAGNTGLVTVLARQ
+ MPAEYQTIASAIITLANDPNNVLTFARTTGATDFTRQMAAVAFASLARQDAENARLMI
+ PSLVQAQKLNEEQTQALRDIVAWRLMGSDVTDEQAKWRDDAIMRSQSTSLIERRVRMA
+ LGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGRDAEAKEILHALMQKRGFYP
+ MVAAQRLGEEYTLKIDKAPAHVNRALTQGPEMARVRELMYWNLDNTARSEWANLVKSR
+ TKSEQAQLARYAFNQHWWDLSVQATIAGKLWDHLEERFPLAYNDLFTRYTRGKDISQS
+ YAMAIARQESAWNPKVKSPVGASGLMQIMPGTAAHTVKMFSIPDYRSPGQLLEPETNI
+ NIGTSYLQYVYQQFGNNRIFASAAYNAGPGRVRTWLGNSAGRIDAVAFVESIPFSETR
+ GYVKNVLAYDAYYRHFMGQKETLMSDSEWQQRY"
+ misc_feature complement(2932150..2934084)
+ /locus_tag="SARI_03001"
+ /note="lytic murein transglycosylase; Provisional; Region:
+ PRK11619"
+ /db_xref="CDD:183236"
+ misc_feature complement(2932222..2932599)
+ /locus_tag="SARI_03001"
+ /note="Lytic Transglycosylase (LT) and Goose Egg White
+ Lysozyme (GEWL) domain. Members include the soluble and
+ insoluble membrane-bound LTs in bacteria, the LTs in
+ bacteriophage lambda, as well as, the eukaryotic
+ "goose-type" lysozymes (GEWL). LTs...; Region:
+ LT_GEWL; cd00254"
+ /db_xref="CDD:238157"
+ misc_feature complement(order(2932348..2932350,2932405..2932407,
+ 2932510..2932512,2932570..2932572))
+ /locus_tag="SARI_03001"
+ /note="N-acetyl-D-glucosamine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:238157"
+ misc_feature complement(2932570..2932572)
+ /locus_tag="SARI_03001"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:238157"
+ gene 2934314..2935960
+ /locus_tag="SARI_03002"
+ CDS 2934314..2935960
+ /locus_tag="SARI_03002"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:REFSEQ:YP_153426.1"
+ /note="'ChvD; in Agrobacterium tumefaciens, mutations in
+ both Walker boxes were found to affect virulence'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative ABC transporter ATP-binding protein"
+ /protein_id="YP_001571988.1"
+ /db_xref="GI:161504876"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAGKSTLLRI
+ MAGLDTDIEGEARPQPGIKIGYLPQEPQLNPEHTVRESVEEAVSEVVSALKRLDEVYA
+ LYADPDADFDKLAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKVEKLSGGE
+ RRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNV
+ AGWILELDRGEGIPWEGNYSSWLEQKDQRLAQEASQEAARRKSIEKELEWVRQGAKGR
+ QSKGKARLARFEELNSVEYQKRNETNELFIPPGPRLGDKVIEVSNLRKSYGDRVLIDD
+ LSFSVPKGAIVGIIGPNGAGKSTLFRMMSGQEQPDSGTITLGETVKLASVDQFRDAMD
+ NSKTVWEEVSGGLDIMKIGNTEMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAK
+ LLQVGGNVLLLDEPTNDLDIETLRALENALLEFPGCAMVISHDRWFLDRIATHILDYQ
+ DEGKVEFFEGNFTEYEEYKKRTLGAEALEPKRIKYKRIAK"
+ misc_feature 2934314..2935957
+ /locus_tag="SARI_03002"
+ /note="putative ABC transporter ATP-binding protein;
+ Reviewed; Region: PRK11819"
+ /db_xref="CDD:236992"
+ misc_feature 2934344..>2934520
+ /locus_tag="SARI_03002"
+ /note="ATP-binding cassette domain of elongation factor 3,
+ subfamily F; Region: ABCF_EF-3; cd03221"
+ /db_xref="CDD:213188"
+ misc_feature <2934770..2935000
+ /locus_tag="SARI_03002"
+ /note="ATP-binding cassette domain of elongation factor 3,
+ subfamily F; Region: ABCF_EF-3; cd03221"
+ /db_xref="CDD:213188"
+ misc_feature 2934980..2935195
+ /locus_tag="SARI_03002"
+ /note="ABC transporter; Region: ABC_tran_2; pfam12848"
+ /db_xref="CDD:221805"
+ misc_feature 2935262..2935846
+ /locus_tag="SARI_03002"
+ /note="ATP-binding cassette domain of elongation factor 3,
+ subfamily F; Region: ABCF_EF-3; cd03221"
+ /db_xref="CDD:213188"
+ gene complement(2936042..2937274)
+ /locus_tag="SARI_03003"
+ CDS complement(2936042..2937274)
+ /locus_tag="SARI_03003"
+ /inference="protein motif:HMMPfam:IPR001387"
+ /inference="protein motif:HMMSmart:IPR001387"
+ /inference="protein motif:HMMTigr:IPR004821"
+ /inference="protein motif:HMMTigr:IPR006417"
+ /inference="protein motif:ScanRegExp:IPR002086"
+ /inference="protein motif:superfamily:IPR010982"
+ /inference="similar to AA sequence:REFSEQ:NP_463436.2"
+ /note="catalyzes the formation of NAD(+) from nicotinamide
+ ribonucleotide"
+ /codon_start=1
+ /transl_table=11
+ /product="nicotinamide-nucleotide adenylyltransferase"
+ /protein_id="YP_001571989.1"
+ /db_xref="GI:161504877"
+ /db_xref="InterPro:IPR001387"
+ /db_xref="InterPro:IPR002086"
+ /db_xref="InterPro:IPR004821"
+ /db_xref="InterPro:IPR006417"
+ /db_xref="InterPro:IPR010982"
+ /translation="MSSFDYLKTAIKQQGCTLQQVADASGMTKGYLSQLLNAKIKSPS
+ AQKLEALHRFLGLEFPRQQKNIGVVFGKFYPLHTGHIYLIQRACSQVDELHIVMGYDD
+ TRDRGLFEDSAMSQQPTVSDRLRWLLQTFKYQKNIRIHAFNEEGMEPYPHGWDVWSNG
+ IKAFMAEKGIQPSWIYTSEEADAPQYLEHLGIETVLVDPERTFMNISGAQIRENPFRY
+ WEYIPTEVKPFFVRTVAILGGESSGKSTLVNKLANIFNTTSAWEYGRDYVFSHLGGDE
+ MALQYSDYDKIALGHAQYIDFAVKYANKVAFIDTDFVTTQAFCKKYEGREHPFVQALI
+ DEYRFDLVILLENNTPWVADGLRSLGSAVDRKAFQSLLVEMLKENNIEFVHVKEADYD
+ GRFLRCVELVKEMMGEQG"
+ misc_feature complement(2937098..2937256)
+ /locus_tag="SARI_03003"
+ /note="Helix-turn-helix XRE-family like proteins.
+ Prokaryotic DNA binding proteins belonging to the
+ xenobiotic response element family of transcriptional
+ regulators; Region: HTH_XRE; cd00093"
+ /db_xref="CDD:238045"
+ misc_feature complement(order(2937164..2937166,2937239..2937241,
+ 2937251..2937253))
+ /locus_tag="SARI_03003"
+ /note="non-specific DNA binding site [nucleotide binding];
+ other site"
+ /db_xref="CDD:238045"
+ misc_feature complement(order(2937167..2937169,2937242..2937244))
+ /locus_tag="SARI_03003"
+ /note="salt bridge; other site"
+ /db_xref="CDD:238045"
+ misc_feature complement(2936045..2937238)
+ /locus_tag="SARI_03003"
+ /note="bifunctional DNA-binding transcriptional repressor/
+ NMN adenylyltransferase; Provisional; Region: PRK08099"
+ /db_xref="CDD:236151"
+ misc_feature complement(order(2937161..2937166,2937176..2937178,
+ 2937185..2937187,2937218..2937223))
+ /locus_tag="SARI_03003"
+ /note="sequence-specific DNA binding site [nucleotide
+ binding]; other site"
+ /db_xref="CDD:238045"
+ misc_feature complement(2936594..2937079)
+ /locus_tag="SARI_03003"
+ /note="Nicotinamide/nicotinate mononucleotide
+ adenylyltransferase of bifunctional NadR-like proteins;
+ Region: NMNAT_NadR; cd02167"
+ /db_xref="CDD:173918"
+ misc_feature complement(order(2936657..2936659,2936663..2936665,
+ 2936738..2936746,2936804..2936806,2936813..2936821,
+ 2936825..2936836,2936843..2936845,2936963..2936965,
+ 2936978..2936980,2937026..2937028,2937035..2937037,
+ 2937044..2937046,2937056..2937067))
+ /locus_tag="SARI_03003"
+ /note="active site"
+ /db_xref="CDD:173918"
+ misc_feature complement(2937035..2937046)
+ /locus_tag="SARI_03003"
+ /note="(T/H)XGH motif; other site"
+ /db_xref="CDD:173918"
+ misc_feature complement(2936051..2936602)
+ /locus_tag="SARI_03003"
+ /note="Predicted ATPase/kinase involved in NAD metabolism
+ [Coenzyme metabolism]; Region: NadR; COG3172"
+ /db_xref="CDD:225713"
+ gene complement(2937376..2938758)
+ /locus_tag="SARI_03004"
+ CDS complement(2937376..2938758)
+ /locus_tag="SARI_03004"
+ /inference="protein motif:FPrintScan:IPR001984"
+ /inference="protein motif:FPrintScan:IPR004504"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR004504"
+ /inference="similar to AA sequence:SwissProt:P24517"
+ /note="Sms; stabilizes the strand-invasion intermediate
+ during the DNA repair; involved in recombination of donor
+ DNA and plays an important role in DNA damage repair after
+ exposure to mutagenic agents"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA repair protein RadA"
+ /protein_id="YP_001571990.1"
+ /db_xref="GI:161504878"
+ /db_xref="InterPro:IPR001984"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR004504"
+ /translation="MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRVAASPT
+ VARNERLSGYAGSAGASKVQKLSDISLEALPRFSTGFKEFDRVLGGGVVPGSAILIGG
+ NPGAGKSTLLLQTLCKLAGQMKTLYVTGEESLQQVAMRAHRLGLPTANLNMLSETSIE
+ QICLIAEEEQPKLMVIDSIQVMHMADIQSSPGSVAQVRETAAYLTRFAKTRGVAIVMV
+ GHVTKDGSLAGPKVLEHCIDCSVLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQG
+ LREVSNPSAIFLSRGDEITSGSSVMVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLE
+ QNRLAILLAVLHRHGGLQMSDQDVFVNVVGGVKVTETSADLALLLAMVSSLRDRPLPQ
+ DLVVFGEVGLAGEIRPVPSGQERISEAAKHGFRRAIVPAANVPKKPPEGMQVFGVKKL
+ ADALSVFDDL"
+ misc_feature complement(2937397..2938758)
+ /locus_tag="SARI_03004"
+ /note="DNA repair protein RadA; Region: sms; TIGR00416"
+ /db_xref="CDD:232966"
+ misc_feature complement(2937607..2938734)
+ /locus_tag="SARI_03004"
+ /note="Sms (bacterial radA) DNA repair protein. This
+ protein is not related to archael radA any more than is to
+ other RecA-like NTPases. Sms has a role in recombination
+ and recombinational repair and is responsible for the
+ stabilization or processing of...; Region: Sms; cd01121"
+ /db_xref="CDD:238541"
+ misc_feature complement(2938432..2938455)
+ /locus_tag="SARI_03004"
+ /note="Walker A motif/ATP binding site; other site"
+ /db_xref="CDD:238541"
+ misc_feature complement(order(2938225..2938230,2938372..2938374,
+ 2938378..2938380,2938432..2938440,2938450..2938452))
+ /locus_tag="SARI_03004"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238541"
+ misc_feature complement(2938228..2938239)
+ /locus_tag="SARI_03004"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:238541"
+ misc_feature complement(2937460..>2937639)
+ /locus_tag="SARI_03004"
+ /note="Subunit ChlI of Mg-chelatase; Region: ChlI;
+ pfam13541"
+ /db_xref="CDD:205719"
+ gene complement(2938818..2939840)
+ /gene="serB"
+ /locus_tag="SARI_03005"
+ CDS complement(2938818..2939840)
+ /gene="serB"
+ /locus_tag="SARI_03005"
+ /inference="protein motif:HMMPfam:IPR005834"
+ /inference="protein motif:HMMTigr:IPR004469"
+ /inference="protein motif:HMMTigr:IPR006383"
+ /inference="similar to AA sequence:INSD:AAL23393.1"
+ /note="catalyzes the formation of serine from
+ O-phosphoserine"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphoserine phosphatase"
+ /protein_id="YP_001571991.1"
+ /db_xref="GI:161504879"
+ /db_xref="InterPro:IPR004469"
+ /db_xref="InterPro:IPR005834"
+ /db_xref="InterPro:IPR006383"
+ /translation="MRYFPLDDSRPNDFTGALMPNITWCDLPDDVSLWPGLPLSLSGD
+ EVMPLDYHAGRSGWLLYGRGLDKQRLTQYQAKLGAAMVIVAAWCVEDYQVIRLAGSLT
+ PRATRLAHEAQLDVAPLGKIPHLRTPGLLVMDMDSTAIQIECIDEIAKLAGTGEKVAE
+ VTERAMRGELDFTASLRSRVATLKDADAGILRQVRENLPLMPGLTQLVLKLQMLGWKV
+ AIASGGFTFFADYLRDQLRLTAAVANELEIMDGKFTGHVIGDIVDAEYKANILLRLAQ
+ EYEIPLAQTVAIGDGANDLPMIKAAGLGIAFHAKPKVNEKTEITIRHADLMGVFCILS
+ GSMNQK"
+ misc_feature complement(2938821..2939786)
+ /gene="serB"
+ /locus_tag="SARI_03005"
+ /note="phosphoserine phosphatase; Provisional; Region:
+ serB; PRK11133"
+ /db_xref="CDD:182988"
+ misc_feature complement(<2939145..2939453)
+ /gene="serB"
+ /locus_tag="SARI_03005"
+ /note="haloacid dehalogenase-like hydrolase; Region: HAD;
+ cl17202"
+ /db_xref="CDD:247756"
+ misc_feature complement(2938920..2939297)
+ /gene="serB"
+ /locus_tag="SARI_03005"
+ /note="Haloacid dehalogenase-like hydrolases. The haloacid
+ dehalogenase-like (HAD) superfamily includes L-2-haloacid
+ dehalogenase, epoxide hydrolase, phosphoserine
+ phosphatase, phosphomannomutase, phosphoglycolate
+ phosphatase, P-type ATPase, and many others; Region:
+ HAD_like; cd01427"
+ /db_xref="CDD:119389"
+ misc_feature complement(2939175..2939177)
+ /gene="serB"
+ /locus_tag="SARI_03005"
+ /note="motif II; other site"
+ /db_xref="CDD:119389"
+ gene 2939903..2940547
+ /locus_tag="SARI_03006"
+ CDS 2939903..2940547
+ /locus_tag="SARI_03006"
+ /inference="similar to AA sequence:INSD:AAV80110.1"
+ /note="'KEGG: ece:Z5988 1.9e-98 putative lipoate-protein
+ ligase A K03800:K07186;
+ COG: COG3726 Uncharacterized membrane protein affecting
+ hemolysin expression;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571992.1"
+ /db_xref="GI:161504880"
+ /translation="MARAKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQ
+ LEELARTLAHQVTLNIAPLMRSETPDEKSIKALLTQLTESSRILDAGVYDEQGDMIAR
+ AGESVNVRDRLALDGKKAGSYFNQQIVEPIQGKTGPLGYLRLTLDTHTLATEAKQVDN
+ TTNILRLMLLLALAIGVVLTRTLLQGKRTRWQQSPFLLTASKPVPEEEESEKQD"
+ misc_feature 2939903..2940544
+ /locus_tag="SARI_03006"
+ /note="hypothetical protein; Provisional; Region:
+ PRK11246"
+ /db_xref="CDD:236885"
+ gene 2940573..2941589
+ /gene="lplA"
+ /locus_tag="SARI_03007"
+ CDS 2940573..2941589
+ /gene="lplA"
+ /locus_tag="SARI_03007"
+ /inference="protein motif:HMMPfam:IPR004143"
+ /inference="protein motif:HMMTigr:IPR004562"
+ /inference="similar to AA sequence:SwissProt:Q8ZJV1"
+ /note="Catalyzes both the ATP-dependent activation of
+ exogenously supplied lipoate to lipoyl-AMP and the
+ transfer of the activated lipoyl on the lipoate-dependent
+ enzymes. Creates an amide linkage that joins the free
+ carboxyl group of lipoic acid to the epsilon-amino group
+ of a specific lysine residue in lipoyl domain of
+ apoproteins"
+ /codon_start=1
+ /transl_table=11
+ /product="lipoate-protein ligase A"
+ /protein_id="YP_001571993.1"
+ /db_xref="GI:161504881"
+ /db_xref="InterPro:IPR004143"
+ /db_xref="InterPro:IPR004562"
+ /translation="MSTLRLLISDSYDPWFNLAVEESIFRQMPATQRVLFLWRNADTV
+ VIGRAQNPWKECNTRRMEKDNVRLARRSSGGGAVFHDLGNTCFTFMAGKPEYDKTIST
+ NIVLAALNSLGVMADASGRNDLVVKTAEGDRKVSGSAYRETKDRGFHHGTLLLNADLS
+ RLANYLNPDKKKLAAKGITSVRSRVANLTELLPGLSHEQVCQAVAEAFFAHYGERVEA
+ EVISPDKTPDLPNFAETFALQSSWEWNFGQAPAFSHLLDERFTWGGVELHFDVEKGYI
+ TRTQVFTDSLNPAPQEALAERLQGCQYRAEILQQACDALRVDFPEQEKELQELSAWIA
+ GAVR"
+ misc_feature 2940573..2941586
+ /gene="lplA"
+ /locus_tag="SARI_03007"
+ /note="lipoate-protein ligase A; Provisional; Region:
+ lplA; PRK03822"
+ /db_xref="CDD:179655"
+ misc_feature 2940573..2941316
+ /gene="lplA"
+ /locus_tag="SARI_03007"
+ /note="Lipoate-protein ligase A [Coenzyme metabolism];
+ Region: LplA; COG0095"
+ /db_xref="CDD:223173"
+ misc_feature 2941314..2941568
+ /gene="lplA"
+ /locus_tag="SARI_03007"
+ /note="Bacterial lipoate protein ligase C-terminus;
+ Region: Lip_prot_lig_C; pfam10437"
+ /db_xref="CDD:151014"
+ gene complement(2941678..2942397)
+ /gene="deoD"
+ /locus_tag="SARI_03008"
+ CDS complement(2941678..2942397)
+ /gene="deoD"
+ /locus_tag="SARI_03008"
+ /inference="protein motif:HMMPfam:IPR000845"
+ /inference="protein motif:HMMTigr:IPR004402"
+ /inference="protein motif:ScanRegExp:IPR000845"
+ /inference="similar to AA sequence:INSD:CAD03405.1"
+ /note="catalyzes the reversible phosphorolysis of
+ ribonucleosides and 2'- deoxyribonucleosides to the free
+ base and (2'-deoxy)ribose-1- phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="purine nucleoside phosphorylase"
+ /protein_id="YP_001571994.1"
+ /db_xref="GI:161504882"
+ /db_xref="InterPro:IPR000845"
+ /db_xref="InterPro:IPR004402"
+ /translation="MATPHINAEMGDFADVVLMPGDPLRAKHIAETFLEDVREVNNVR
+ GMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVRMDVKLR
+ DVVIGMGACTDSKVNRIRFKDHDFAAIADFDMVRNAVDAAKALGVDARVGNLFSADLF
+ YSPDGDMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAER
+ QTTFNDMIKIALESVLLGDKE"
+ misc_feature complement(2941690..2942394)
+ /gene="deoD"
+ /locus_tag="SARI_03008"
+ /note="purine nucleoside phosphorylase; Reviewed; Region:
+ deoD; PRK05819"
+ /db_xref="CDD:180275"
+ misc_feature complement(2941699..2942388)
+ /gene="deoD"
+ /locus_tag="SARI_03008"
+ /note="Uridine phosphorylase [Nucleotide transport and
+ metabolism]; Region: Udp; COG2820"
+ /db_xref="CDD:225376"
+ gene complement(2942508..2943731)
+ /locus_tag="SARI_03009"
+ CDS complement(2942508..2943731)
+ /locus_tag="SARI_03009"
+ /inference="protein motif:HMMPfam:IPR006124"
+ /inference="protein motif:HMMPfam:IPR013553"
+ /inference="protein motif:HMMPIR:IPR010045"
+ /inference="protein motif:HMMTigr:IPR010045"
+ /inference="similar to AA sequence:INSD:CAD03404.1"
+ /note="catalyzes the transfer of phosphate between the C1
+ and C5 carbons of pentose"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphopentomutase"
+ /protein_id="YP_001571995.1"
+ /db_xref="GI:161504883"
+ /db_xref="InterPro:IPR006124"
+ /db_xref="InterPro:IPR010045"
+ /db_xref="InterPro:IPR013553"
+ /translation="MKRAFIMVLDSFGIGATEDADRFGDVGSDTLGHIAEACAKGEAD
+ NGRKGPLNLPNLTRLGLVKAHEGSTGKIAAGMDGNADVIGAYAWAHELSSGKDTPSGH
+ WEIAGVPVLFDWGYFSDHENSFPQELLDKLVKRANLPGYLGNCHSSGTVILDQLGEEH
+ MKTGKPIFYTSADSVFQIACHEETFGLDKLYELCEIAREELTEGGYNIGRVIARPFIG
+ DKAGNFQRTGNRHDLAVEPPAPTVLQKLVDEKQGHVVSVGKIADIYANCGITKKVKAT
+ GLDALFDATIKEMKDAGDKTIVFTNFVDFDSSWGHRRDIAGYASGLELFDRRLPELMA
+ LVGEDDILILTADHGCDPSWTGTDHTREHIPVLIYGPKVKPGSLGHRETFADIGQTLA
+ SYFGTSPMDYGKNML"
+ misc_feature complement(2942511..2943731)
+ /locus_tag="SARI_03009"
+ /note="phosphopentomutase; Provisional; Region: PRK05362"
+ /db_xref="CDD:235430"
+ misc_feature complement(2942514..2943728)
+ /locus_tag="SARI_03009"
+ /note="Metalloenzyme superfamily; Region: Metalloenzyme;
+ pfam01676"
+ /db_xref="CDD:216643"
+ gene complement(2943783..2945105)
+ /gene="deoA"
+ /locus_tag="SARI_03010"
+ CDS complement(2943783..2945105)
+ /gene="deoA"
+ /locus_tag="SARI_03010"
+ /inference="protein motif:BlastProDom:IPR000312"
+ /inference="protein motif:Gene3D:IPR000312"
+ /inference="protein motif:HMMPfam:IPR000312"
+ /inference="protein motif:HMMPfam:IPR013102"
+ /inference="protein motif:HMMPIR:IPR000053"
+ /inference="protein motif:HMMTigr:IPR000053"
+ /inference="protein motif:HMMTigr:IPR013465"
+ /inference="protein motif:ScanRegExp:IPR000053"
+ /inference="similar to AA sequence:INSD:AAL23383.1"
+ /note="'Catalyzes the reversible phosphorolysis of
+ thymidine, deoxyuridine and their analogues to their
+ respective bases and 2-deoxyribose 1-phosphate'"
+ /codon_start=1
+ /transl_table=11
+ /product="thymidine phosphorylase"
+ /protein_id="YP_001571996.1"
+ /db_xref="GI:161504884"
+ /db_xref="InterPro:IPR000053"
+ /db_xref="InterPro:IPR000312"
+ /db_xref="InterPro:IPR013102"
+ /db_xref="InterPro:IPR013465"
+ /translation="MFLAQEIIRKKRDGHTLSDEEIRFFINGIRDNTISEGQIAALAM
+ TIFFHDMTMPERVSLTMAMRDSGTVLDWKNLNLNGPIVDKHSTGGVGDVTSLMLGPMV
+ AACGGYVPMISGRGLGHTGGTLDKLEAIPGFDIFPDDNRFRDIIQDVGVAIIGQTNSL
+ APADKRFYATRDITATVDSIPLITGSILAKKLAEGLDALVMDVKVGSGAFMPTYELSE
+ ALAEAIVGVANGAGVRTTALLTDMNQVLASSAGNALEVREAVQFLTGEYRNPRLFDVT
+ MALCIEMLISGQLAKDDAQARAKLQAVLDNGKAAEVFGRMVAAQKGPTDFVENYDKYL
+ PAAMLSKAVYADTEGFVSAMDTRALGMAVVSMGGGRRQASDTIDYSVGFTDMVRLGDS
+ VDGQRPLAVIHAKDEANWQEAAKAVKAAIILDDKAPASTPSIYRRITE"
+ misc_feature complement(2943786..2945105)
+ /gene="deoA"
+ /locus_tag="SARI_03010"
+ /note="thymidine phosphorylase; Reviewed; Region: deoA;
+ PRK05820"
+ /db_xref="CDD:180276"
+ misc_feature complement(2944902..2945093)
+ /gene="deoA"
+ /locus_tag="SARI_03010"
+ /note="Glycosyl transferase family, helical bundle domain;
+ Region: Glycos_trans_3N; pfam02885"
+ /db_xref="CDD:145834"
+ misc_feature complement(2944107..2944874)
+ /gene="deoA"
+ /locus_tag="SARI_03010"
+ /note="Glycosyl transferase family, a/b domain; Region:
+ Glycos_transf_3; pfam00591"
+ /db_xref="CDD:216013"
+ misc_feature complement(2943834..2944058)
+ /gene="deoA"
+ /locus_tag="SARI_03010"
+ /note="Pyrimidine nucleoside phosphorylase C-terminal
+ domain; Region: PYNP_C; pfam07831"
+ /db_xref="CDD:116444"
+ gene complement(2945229..2946026)
+ /locus_tag="SARI_03011"
+ CDS complement(2945229..2946026)
+ /locus_tag="SARI_03011"
+ /inference="protein motif:HMMPanther:IPR011343"
+ /inference="protein motif:HMMPfam:IPR002915"
+ /inference="protein motif:HMMPIR:IPR011343"
+ /inference="protein motif:HMMTigr:IPR011343"
+ /inference="similar to AA sequence:INSD:AAL23382.1"
+ /note="catalyzes the formation of D-glyceraldehyde
+ 3-phosphate and acetaldehyde from
+ 2-deoxy-D-ribose-5-phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="deoxyribose-phosphate aldolase"
+ /protein_id="YP_001571997.1"
+ /db_xref="GI:161504885"
+ /db_xref="InterPro:IPR002915"
+ /db_xref="InterPro:IPR011343"
+ /translation="MPLENVMTDLKASSLRALKLMDLTTLNDDDTNEKVIALCHQAKT
+ PVGNTAAICIYPRFIPIARKTLKEQGTPEIRIATVTNFPHGNDDIDIALAETRAAIAY
+ GADEVDVVFPYRALIAGNEQVGFDLVKACKDACAAANVLLKVIIETGELKEEALIRKA
+ SEISIKAGADFIKTSTGKVPVNATPESARIMMEVIRDMGVEKNVGFKPAGGVRTAEDA
+ QQFLAIADELFGADWADSRHYRFGASSLLASLLKALGHGDGKSVSSY"
+ misc_feature complement(2945334..2945930)
+ /locus_tag="SARI_03011"
+ /note="2-deoxyribose-5-phosphate aldolase (DERA) of the
+ DeoC family; Region: DeoC; cd00959"
+ /db_xref="CDD:188646"
+ misc_feature complement(order(2945577..2945579,2945625..2945630,
+ 2945685..2945687,2945691..2945693,2945718..2945729,
+ 2945742..2945744,2945757..2945759,2945781..2945783,
+ 2945853..2945861))
+ /locus_tag="SARI_03011"
+ /note="intersubunit interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:188646"
+ misc_feature complement(order(2945334..2945339,2945394..2945402,
+ 2945499..2945501,2945508..2945510))
+ /locus_tag="SARI_03011"
+ /note="active site"
+ /db_xref="CDD:188646"
+ misc_feature complement(2945508..2945510)
+ /locus_tag="SARI_03011"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:188646"
+ gene 2946268..2947818
+ /locus_tag="SARI_03012"
+ CDS 2946268..2947818
+ /locus_tag="SARI_03012"
+ /inference="similar to AA sequence:REFSEQ:YP_153415.1"
+ /note="'COG: NOG06143 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571998.1"
+ /db_xref="GI:161504886"
+ /translation="MPASCETALQQRCQQIVTSPVLTPEQKRHFLALEAENALPYPTL
+ QEDARQALDEGVICDMFEGHAPFKPRYVLPDYARFLANGSQWLELEGAKDLDDALSLL
+ TILYHHVPSVTSMPVYLGQLDALLQPHVRILTQNEIDIRIKRFWRYLDRTLPDAFMHA
+ NIGPADTPVTRAILRADAELNQVAPNLTFIYDAEITPDDLLLEVAKNICECSKPHISN
+ GPVNDKIFTKGHYGIVSCYNSLPLGGGGSTLVRLNLKAVAERSTSVDDFFSRTLPHYC
+ RQQIAIINSRCEFLYEKSHFFENSFLVQEGLIDPERFAPMFGMYGLAEAVNLLCENAG
+ LNARYGKNETANELGYRISAQLADFVENTPVKYGWKQRALLHAQSGISSDSGTTPGAR
+ LPYGDEPDPITHLQTVAPHHAFYHAGISDILTLDETIKRNPQALVQLCLGAFKAGMRE
+ FTANVSGNDLVRVTGYMVRLSDLTKFRAEGSRTNTTWLGEEAARNTRILERQPRVVSH
+ EQQMRFSQ"
+ misc_feature 2946286..2947812
+ /locus_tag="SARI_03012"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10977"
+ /db_xref="CDD:182879"
+ gene 2948066..2948653
+ /locus_tag="SARI_03013"
+ CDS 2948066..2948653
+ /locus_tag="SARI_03013"
+ /inference="protein motif:HMMPfam:IPR007197"
+ /inference="similar to AA sequence:REFSEQ:NP_463421.1"
+ /note="'KEGG: vfi:VFA0962 7.5e-40 pyruvate formate-lyase
+ activating enzyme K04069;
+ COG: COG1180 Pyruvate-formate lyase-activating enzyme;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001571999.1"
+ /db_xref="GI:161504887"
+ /db_xref="InterPro:IPR007197"
+ /translation="MAQTMSVDDVLRHIRKASLFIEGITVSGGEATTQLPFIVALFTA
+ IKADPLLQRLTCLVDSNGQLSETGWQKLLPVCDGVMLDLKAWKSECHHRLTGRDNTHI
+ KHSIRFLAARGKLAELRLLVIPDQVDYAAHIDSLAAFIMSLGAVPVRLNAFHAQGVYG
+ EAKAWPSATSEDVEQLAQRLRERGVDNLIFPALYL"
+ misc_feature <2948066..2948638
+ /locus_tag="SARI_03013"
+ /note="glycine radical enzyme activase, YjjW family;
+ Region: activase_YjjW; TIGR04041"
+ /db_xref="CDD:188556"
+ gene complement(2948741..2949514)
+ /locus_tag="SARI_03014"
+ CDS complement(2948741..2949514)
+ /locus_tag="SARI_03014"
+ /inference="protein motif:HMMPanther:IPR001130"
+ /inference="protein motif:HMMPfam:IPR001130"
+ /inference="protein motif:HMMPIR:IPR012278"
+ /inference="protein motif:ScanRegExp:IPR001130"
+ /inference="similar to AA sequence:REFSEQ:YP_219399.1"
+ /note="'KEGG: sec:SC4412 8.6e-126 yjjV; putative hydrolase
+ K03424;
+ COG: COG0084 Mg-dependent DNase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative deoxyribonuclease YjjV"
+ /protein_id="YP_001572000.1"
+ /db_xref="GI:161504888"
+ /db_xref="InterPro:IPR001130"
+ /db_xref="InterPro:IPR012278"
+ /translation="MSWRFIDTHCHFDFPPFTGDELASIQRAREAGVEKIIVPATEAA
+ HFPRVLALAARFPPLYAALGLHPIVIEHHANDDPDKLQQALAQRQNIVAVGEIGLDLY
+ RDDPQFARQERFLDAQLQLAKRCDLPVILHSRRTHDKLAMHLKRQDLPRTGVVHGFAG
+ SLQQAERFVRLGYKIGVGGTITYPRASKTRDVMARLPLDALLLETDAPDMPLNGFQGQ
+ PNRPEQVVRVFDVLCELRPEPADVVADALYHNTMALFDF"
+ misc_feature complement(2948750..2949502)
+ /locus_tag="SARI_03014"
+ /note="TatD like proteins; E.coli TatD is a cytoplasmic
+ protein, shown to have magnesium dependent DNase activity;
+ Region: TatD_DNAse; cd01310"
+ /db_xref="CDD:238635"
+ misc_feature complement(order(2948897..2948899,2949047..2949049,
+ 2949119..2949121,2949482..2949484,2949488..2949490))
+ /locus_tag="SARI_03014"
+ /note="active site"
+ /db_xref="CDD:238635"
+ gene complement(2949511..2950605)
+ /locus_tag="SARI_03015"
+ CDS complement(2949511..2950605)
+ /locus_tag="SARI_03015"
+ /inference="protein motif:HMMPfam:IPR002641"
+ /inference="similar to AA sequence:INSD:AAL23378.1"
+ /note="'KEGG: vfi:VFA0008 4.3e-37 phospholipase;
+ COG: COG4667 Predicted esterase of the alpha-beta
+ hydrolase superfamily;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572001.1"
+ /db_xref="GI:161504889"
+ /db_xref="InterPro:IPR002641"
+ /translation="MKNRKAEVGQRIPVTLGNIAPLSLTPFRPGRMALVCEGGGQRGI
+ FTAGVLDEFMRAQFNPFHLYFGTSAGAQNLSAYLCNQPGYGRKVIMRYTTRREFFDPL
+ RFVRGGNLIDLDWLVESTAARMPLQMDTAARLFDTGKSFYMCACRGDDYTPGYFSPTK
+ QNWLDIIRASSAIPGFYRTGVALEGVNYLDGGISDAIPVQEAAKRGAKTIVVIRTVPS
+ QMYYTPQWFKRMERWLGESSLQPLVNLVQHHETTYSAIQQFIEKPPGKLRIIEIYPPK
+ PLHSMALGSRIPALREDYKTGRLCGRYFLATVGKLLAATPPLLRHTSRIAVPETVVVP
+ PAPVANDTHVAEMINAPQANDTTFTDEDLA"
+ misc_feature complement(2949658..2950545)
+ /locus_tag="SARI_03015"
+ /note="Predicted esterase of the alpha-beta hydrolase
+ superfamily [General function prediction only]; Region:
+ COG4667"
+ /db_xref="CDD:227013"
+ misc_feature complement(2949703..2950506)
+ /locus_tag="SARI_03015"
+ /note="Hypothetical patatin similar to yjju protein of
+ Escherichia coli; Region: Pat_hypo_Ecoli_yjju_like;
+ cd07208"
+ /db_xref="CDD:132847"
+ misc_feature complement(order(2950036..2950038,2950402..2950404,
+ 2950480..2950482,2950486..2950491))
+ /locus_tag="SARI_03015"
+ /note="active site"
+ /db_xref="CDD:132847"
+ misc_feature complement(2950396..2950410)
+ /locus_tag="SARI_03015"
+ /note="nucleophile elbow; other site"
+ /db_xref="CDD:132847"
+ gene complement(2950708..2950887)
+ /locus_tag="SARI_03016"
+ CDS complement(2950708..2950887)
+ /locus_tag="SARI_03016"
+ /inference="protein motif:HMMPfam:IPR009760"
+ /inference="protein motif:HMMPIR:IPR009760"
+ /inference="similar to AA sequence:INSD:AAL23377.1"
+ /note="'COG: NOG16919 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572002.1"
+ /db_xref="GI:161504890"
+ /db_xref="InterPro:IPR009760"
+ /translation="MVKERLMFRWGIIFLVIALIAAALGFGGLAGTAAGAAKIVFVVG
+ IVLFLVSLFMGRKRP"
+ gene 2950893..2951633
+ /locus_tag="SARI_03017"
+ CDS 2950893..2951633
+ /locus_tag="SARI_03017"
+ /inference="protein motif:ScanRegExp:IPR002016"
+ /inference="similar to AA sequence:INSD:AAN83878.1"
+ /note="'Psort location: extracellular, including cell
+ wall, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572003.1"
+ /db_xref="GI:161504891"
+ /db_xref="InterPro:IPR002016"
+ /translation="MSTAKYERSGYSFAIFLVWCTLRLPTNAGRSNYDELLNFQIVFN
+ AFYAINGFRDAFSAVALFLSFNSTGELYDAIGRFHFHFTGRDEIVRQQLSFDFTGRGR
+ IAGIAFHRTFFVIANMEFVADGGNTLYAFRHFHGGFSLRLAFHKAAQGDDFLIGFDRN
+ IGAFNIVMVHQGGFYFRSDSAVIHEVTDFIHRAIDFLPRGFGSALRLIRCCVFCKGRT
+ CRNSRGQHYGQQSFRNLQSCHSHRFCPV"
+ gene complement(2950998..2951615)
+ /locus_tag="SARI_03018"
+ CDS complement(2950998..2951615)
+ /locus_tag="SARI_03018"
+ /inference="protein motif:HMMPfam:IPR007055"
+ /inference="protein motif:HMMSmart:IPR014004"
+ /inference="similar to AA sequence:INSD:AAO72036.1"
+ /note="'KEGG: hit:NTHI0707 0.00029 fkbY; probable
+ FKBP-type peptidyl-prolyl cis-trans isomerase K03772;
+ COG: COG2823 Predicted periplasmic or secreted
+ lipoprotein;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="periplasmic protein"
+ /protein_id="YP_001572004.1"
+ /db_xref="GI:161504892"
+ /db_xref="InterPro:IPR007055"
+ /db_xref="InterPro:IPR014004"
+ /translation="MTMTRLKISKTLLAVMLTSAVATGSAFAENATTDKAQSGTETAG
+ QKVDSSMNKVGNFMDDSAITAKVKAALVDHDNIKSTDISVETNKKVVTLSGFVESQAQ
+ AEAAVKVAKGVEGVTSVSDKLHVRDNKEGSVKGYAGDTATTSEVKAKLLADDLVPSRK
+ VKVETTDGVVQLSGTVETQEQSDRAESIAKAVDGVKSVKNDLKVQ"
+ misc_feature complement(2951001..2951609)
+ /locus_tag="SARI_03018"
+ /note="periplasmic protein; Provisional; Region: PRK10568"
+ /db_xref="CDD:182556"
+ misc_feature complement(2951001..2951156)
+ /locus_tag="SARI_03018"
+ /note="BON domain; Region: BON; pfam04972"
+ /db_xref="CDD:203137"
+ gene complement(2951700..2951825)
+ /locus_tag="SARI_03019"
+ CDS complement(2951700..2951825)
+ /locus_tag="SARI_03019"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572005.1"
+ /db_xref="GI:161504893"
+ /translation="MREYESLKLRFVSDTILITETEGWQATRRHKFTNVTPVIDF"
+ gene complement(2952017..2953606)
+ /gene="prfC"
+ /locus_tag="SARI_03020"
+ CDS complement(2952017..2953606)
+ /gene="prfC"
+ /locus_tag="SARI_03020"
+ /inference="protein motif:HMMPfam:IPR000795"
+ /inference="protein motif:HMMPfam:IPR004161"
+ /inference="protein motif:HMMTigr:IPR004548"
+ /inference="protein motif:HMMTigr:IPR005225"
+ /inference="protein motif:ScanRegExp:IPR000795"
+ /inference="protein motif:superfamily:IPR009000"
+ /inference="protein motif:superfamily:IPR009022"
+ /inference="similar to AA sequence:INSD:AAL23375.1"
+ /note="stimulates the release of release factors 1 and 2
+ from the ribosome after hydrolysis of the ester bond in
+ peptidyl-tRNA has occurred; GDP/GTP-binding protein"
+ /codon_start=1
+ /transl_table=11
+ /product="peptide chain release factor 3"
+ /protein_id="YP_001572006.1"
+ /db_xref="GI:161504894"
+ /db_xref="InterPro:IPR000795"
+ /db_xref="InterPro:IPR004161"
+ /db_xref="InterPro:IPR004548"
+ /db_xref="InterPro:IPR005225"
+ /db_xref="InterPro:IPR009000"
+ /db_xref="InterPro:IPR009022"
+ /translation="MTLSPYLQEVAKRRTFAIISHPDAGKTTITEKVLLFGQAIQTAG
+ TVKGRGSSQHAKSDWMEMEKQRGISITTSVMQFPYHDCLVNLLDTPGHEDFSEDTYRT
+ LTAVDCCLMVIDAAKGVEDRTRKLMEVTRLRDTPILTFMNKLDRDIRDPMELLDEVEN
+ ELKIGCAPITWPIGCGKLFKGVYHLYKDETYLYQTGKGHTIQEVRIVKGLNNPDLDAA
+ VGEDLAQQLRDELELVQGASNEFDKDLFLAGEITPVFFGTALGNFGVDHMLDGLVEWA
+ PAPMPRQTDTRTVEASEEKFSGFVFKIQANMDPKHRDRVAFMRVVSGKYEKGMKLRQV
+ RTGKDVVISDALTFMAGDRSHVEEAYPGDILGLHNHGTIQIGDTFTQGEMMKFTGIPN
+ FAPELFRRIRLKDPLKQKQLLKGLVQLSEEGAVQVFRPISNNDLIVGAVGVLQFDVVV
+ ARLKSEYNVEAIYESVNVATARWVESTDAKKFEEFKRKNETQLALDGGDNLTYIAPTM
+ VNLNLTQERYPDVQFRKTREH"
+ misc_feature complement(2952020..2953597)
+ /gene="prfC"
+ /locus_tag="SARI_03020"
+ /note="peptide chain release factor 3; Provisional;
+ Region: prfC; PRK00741"
+ /db_xref="CDD:179105"
+ misc_feature complement(2952770..2953573)
+ /gene="prfC"
+ /locus_tag="SARI_03020"
+ /note="Release Factor 3 (RF3) protein involved in the
+ terminal step of translocation in bacteria; Region: RF3;
+ cd04169"
+ /db_xref="CDD:206732"
+ misc_feature complement(2953526..2953549)
+ /gene="prfC"
+ /locus_tag="SARI_03020"
+ /note="G1 box; other site"
+ /db_xref="CDD:206732"
+ misc_feature complement(order(2953136..2953138,2953148..2953150,
+ 2953256..2953261,2953328..2953333,2953385..2953390,
+ 2953502..2953507,2953514..2953516,2953523..2953528,
+ 2953538..2953540,2953544..2953546))
+ /gene="prfC"
+ /locus_tag="SARI_03020"
+ /note="putative GEF interaction site [polypeptide
+ binding]; other site"
+ /db_xref="CDD:206732"
+ misc_feature complement(order(2952827..2952835,2953172..2953174,
+ 2953178..2953183,2953523..2953540))
+ /gene="prfC"
+ /locus_tag="SARI_03020"
+ /note="GTP/Mg2+ binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:206732"
+ misc_feature complement(2953388..2953423)
+ /gene="prfC"
+ /locus_tag="SARI_03020"
+ /note="Switch I region; other site"
+ /db_xref="CDD:206732"
+ misc_feature complement(2953400..2953402)
+ /gene="prfC"
+ /locus_tag="SARI_03020"
+ /note="G2 box; other site"
+ /db_xref="CDD:206732"
+ misc_feature complement(2953334..2953345)
+ /gene="prfC"
+ /locus_tag="SARI_03020"
+ /note="G3 box; other site"
+ /db_xref="CDD:206732"
+ misc_feature complement(2953283..2953339)
+ /gene="prfC"
+ /locus_tag="SARI_03020"
+ /note="Switch II region; other site"
+ /db_xref="CDD:206732"
+ misc_feature complement(2953172..2953183)
+ /gene="prfC"
+ /locus_tag="SARI_03020"
+ /note="G4 box; other site"
+ /db_xref="CDD:206732"
+ misc_feature complement(2952827..2952835)
+ /gene="prfC"
+ /locus_tag="SARI_03020"
+ /note="G5 box; other site"
+ /db_xref="CDD:206732"
+ misc_feature complement(2952461..2952715)
+ /gene="prfC"
+ /locus_tag="SARI_03020"
+ /note="RF3_II: this subfamily represents the domain II of
+ bacterial Release Factor 3 (RF3). Termination of protein
+ synthesis by the ribosome requires two release factor (RF)
+ classes. The class II RF3 is a GTPase that removes class I
+ RFs (RF1 or RF2) from the...; Region: RF3_II; cd03689"
+ /db_xref="CDD:239660"
+ gene complement(2953698..2954378)
+ /locus_tag="SARI_03021"
+ CDS complement(2953698..2954378)
+ /locus_tag="SARI_03021"
+ /inference="protein motif:HMMPfam:IPR005834"
+ /inference="protein motif:HMMTigr:IPR006402"
+ /inference="protein motif:HMMTigr:IPR006439"
+ /inference="protein motif:HMMTigr:IPR011951"
+ /inference="similar to AA sequence:INSD:AAL23374.1"
+ /note="'manganese-dependent 5'-nucleotidase; specific for
+ 5'-UMP, 5'-dUMP, and 5'-dTMP; member of haloacid
+ dehalogenase (HAD)-like hydrolase superfamily'"
+ /codon_start=1
+ /transl_table=11
+ /product="nucleotidase"
+ /protein_id="YP_001572007.1"
+ /db_xref="GI:161504895"
+ /db_xref="InterPro:IPR005834"
+ /db_xref="InterPro:IPR006402"
+ /db_xref="InterPro:IPR006439"
+ /db_xref="InterPro:IPR011951"
+ /translation="MMKWDWIFFDADETLFTFDSFTGLQRMFLDYSVTFTAEDFQDYQ
+ AVNKPLWVDYQNGAITSLQLQHARFQSWAERLNVAPGLLNDAFINAMAEICSPLPGAV
+ SLLNAIRGQAKIGIITNGFTALQQIRLERTGLREYFDLLVISEQVGVAKPDPKIFNYA
+ LELAGNPDRSRVLMVGDTAESDILGGINAGLSTCWLNAHHRDQPAGIHPTWTVASLRE
+ LEQLLCKH"
+ misc_feature complement(2953704..2954375)
+ /locus_tag="SARI_03021"
+ /note="dUMP phosphatase; Provisional; Region: PRK09449"
+ /db_xref="CDD:181865"
+ misc_feature complement(2953794..2954135)
+ /locus_tag="SARI_03021"
+ /note="Haloacid dehalogenase-like hydrolases. The haloacid
+ dehalogenase-like (HAD) superfamily includes L-2-haloacid
+ dehalogenase, epoxide hydrolase, phosphoserine
+ phosphatase, phosphomannomutase, phosphoglycolate
+ phosphatase, P-type ATPase, and many others; Region:
+ HAD_like; cd01427"
+ /db_xref="CDD:119389"
+ misc_feature complement(2954025..2954027)
+ /locus_tag="SARI_03021"
+ /note="motif II; other site"
+ /db_xref="CDD:119389"
+ gene complement(2954397..2954900)
+ /gene="rimI"
+ /locus_tag="SARI_03022"
+ CDS complement(2954397..2954900)
+ /gene="rimI"
+ /locus_tag="SARI_03022"
+ /inference="protein motif:HMMPfam:IPR000182"
+ /inference="protein motif:HMMPfam:IPR013653"
+ /inference="protein motif:HMMTigr:IPR006464"
+ /inference="similar to AA sequence:INSD:AAX68312.1"
+ /note="alanine acetyltransferase that specifically
+ acetylates ribosomal protein S18"
+ /codon_start=1
+ /transl_table=11
+ /product="ribosomal-protein-alanine N-acetyltransferase"
+ /protein_id="YP_001572008.1"
+ /db_xref="GI:161504896"
+ /db_xref="InterPro:IPR000182"
+ /db_xref="InterPro:IPR006464"
+ /db_xref="InterPro:IPR013653"
+ /translation="MNSGQTRRHAPHYGNKSANMNTISILSTTDLPVAWQIEQRAHAF
+ PWSEKTFFGNQGERYLNFQLTADGRMAAFAITQVVLDEATLFNIAVDPDFQRRGLGRM
+ LLEHLIDALEKRGVVTLWLEVRASNVAAIALYESLGFNEATIRRNYYPTAEGREDAII
+ MALPISM"
+ misc_feature complement(2954406..2954843)
+ /gene="rimI"
+ /locus_tag="SARI_03022"
+ /note="ribosomal-protein-alanine N-acetyltransferase;
+ Provisional; Region: rimI; PRK09491"
+ /db_xref="CDD:181904"
+ misc_feature complement(2954535..2954702)
+ /gene="rimI"
+ /locus_tag="SARI_03022"
+ /note="N-Acyltransferase superfamily: Various enzymes that
+ characteristically catalyze the transfer of an acyl group
+ to a substrate; Region: NAT_SF; cd04301"
+ /db_xref="CDD:173926"
+ misc_feature complement(order(2954598..2954603,2954631..2954639))
+ /gene="rimI"
+ /locus_tag="SARI_03022"
+ /note="Coenzyme A binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:173926"
+ gene 2955328..2956356
+ /gene="rsmC"
+ /locus_tag="SARI_03023"
+ CDS 2955328..2956356
+ /gene="rsmC"
+ /locus_tag="SARI_03023"
+ /inference="protein motif:HMMPfam:IPR007848"
+ /inference="protein motif:HMMPfam:IPR013675"
+ /inference="protein motif:ScanRegExp:IPR002052"
+ /inference="similar to AA sequence:REFSEQ:NP_463412.1"
+ /note="16S rRNA M2G1207 methyltransferase; one of many
+ enzymes that modify bases of the ribosomal RNA; this
+ enzyme methylates the G at position 1207 of the small
+ ribosomal subunit"
+ /codon_start=1
+ /transl_table=11
+ /product="16S ribosomal RNA m2G1207 methyltransferase"
+ /protein_id="YP_001572009.1"
+ /db_xref="GI:161504897"
+ /db_xref="InterPro:IPR002052"
+ /db_xref="InterPro:IPR007848"
+ /db_xref="InterPro:IPR013675"
+ /translation="MSAFTPASEVLLRHSDDFEQSRILFAGDLQDDLPARFECAASRA
+ HTQQFHHWQVLSRQMGDNVRFSLVAQACDIADCDTLIYYWPKNKPEAQFQLMNILSLM
+ PSGADIFVVGENRSGVRSAEQMLADYAPLNKVDSARRCGLYHGRLEKQPLFSLEPYWD
+ EYSIDGLIIKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAALASHS
+ PKVRLTLCDVSAPAVEASRATLAVNGLDGDVFASNVFSEVKGRFDMIISNPPFHDGMQ
+ TSLDAAQTLIRSAVRHLNSGGELRIVANAFLPYPKILDETFGFHDVIAQTGRFKVYRT
+ VMTRQAKK"
+ misc_feature 2955328..2956353
+ /gene="rsmC"
+ /locus_tag="SARI_03023"
+ /note="16S ribosomal RNA m2G1207 methyltransferase;
+ Provisional; Region: rsmC; PRK09489"
+ /db_xref="CDD:181902"
+ misc_feature 2955349..2955813
+ /gene="rsmC"
+ /locus_tag="SARI_03023"
+ /note="Methyltransferase small domain N-terminal; Region:
+ MTS_N; pfam08468"
+ /db_xref="CDD:203953"
+ misc_feature 2955922..2956224
+ /gene="rsmC"
+ /locus_tag="SARI_03023"
+ /note="S-adenosylmethionine-dependent methyltransferases
+ (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
+ that use S-adenosyl-L-methionine (SAM or AdoMet) as a
+ substrate for methyltransfer, creating the product
+ S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
+ cd02440"
+ /db_xref="CDD:100107"
+ misc_feature order(2955934..2955954,2956006..2956011,2956078..2956080,
+ 2956129..2956131)
+ /gene="rsmC"
+ /locus_tag="SARI_03023"
+ /note="S-adenosylmethionine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:100107"
+ unsure 2956115..2956328
+ /gene="rsmC"
+ /locus_tag="SARI_03023"
+ /note="Sequence derived from one plasmid subclone"
+ gene 2956567..2956650
+ /locus_tag="SARI_03024"
+ tRNA 2956567..2956650
+ /locus_tag="SARI_03024"
+ /product="tRNA-Leu"
+ gene 2956681..2956764
+ /locus_tag="SARI_03025"
+ tRNA 2956681..2956764
+ /locus_tag="SARI_03025"
+ /product="tRNA-Leu"
+ gene 2956799..2956882
+ /locus_tag="SARI_03026"
+ tRNA 2956799..2956882
+ /locus_tag="SARI_03026"
+ /product="tRNA-Leu"
+ gene complement(2956919..2957194)
+ /locus_tag="SARI_03027"
+ CDS complement(2956919..2957194)
+ /locus_tag="SARI_03027"
+ /inference="protein motif:HMMPfam:IPR009885"
+ /inference="similar to AA sequence:REFSEQ:YP_219391.1"
+ /note="'COG: NOG09784 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572010.1"
+ /db_xref="GI:161504898"
+ /db_xref="InterPro:IPR009885"
+ /translation="MILVIIIDSRGKTMLQRALGSGWGVLLPGFIIVGLAFNGLSAHV
+ LKLLIISGLLLSALMLYHKQLRHFVLLPSCMALIGGMMLAMMNWNQG"
+ misc_feature complement(2956922..2957155)
+ /locus_tag="SARI_03027"
+ /note="Protein of unknown function (DUF1435); Region:
+ DUF1435; pfam07256"
+ /db_xref="CDD:148706"
+ gene 2957544..2958470
+ /locus_tag="SARI_03028"
+ CDS 2957544..2958470
+ /locus_tag="SARI_03028"
+ /inference="protein motif:HMMPfam:IPR000160"
+ /inference="protein motif:HMMSmart:IPR000160"
+ /inference="protein motif:HMMTigr:IPR000160"
+ /inference="similar to AA sequence:REFSEQ:YP_153403.1"
+ /note="'KEGG: syn:sll1687 1.1e-25 hik17; hypothetical
+ protein;
+ COG: COG2199 FOG: GGDEF domain;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572011.1"
+ /db_xref="GI:161504899"
+ /db_xref="InterPro:IPR000160"
+ /translation="MTGILALSALLLAWHGKYGQKRINLPFISILFGGLWATHIALKY
+ PALGHYDFSFLLISLLSVLFIGSIAFSANIVAFTLYALPSVALCLWLNGNEQGLRILY
+ LMALPMVGIAIQHIIQKRYDNFAQQLMFKLLAERETLNSLSMLDPLTGLYNRRGLQSR
+ LDTLQALDSHEHYVLLLDIDHFKAYNDHYGHMMGDQALIRVSAAIRDAVRSRDVVCRF
+ GGEEFLVLLTATEPQQARATAERIRQKVYDLKIPHMFNESVATNVTVSIGIAPLADRN
+ IGDAIEKADKALYEAKHLGRNHILVSGDLHAM"
+ misc_feature 2957919..2958440
+ /locus_tag="SARI_03028"
+ /note="c-di-GMP synthetase (diguanylate cyclase, GGDEF
+ domain) [Signal transduction mechanisms]; Region:
+ COG2199"
+ /db_xref="CDD:225109"
+ misc_feature 2957973..2958440
+ /locus_tag="SARI_03028"
+ /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region:
+ GGDEF; cd01949"
+ /db_xref="CDD:143635"
+ misc_feature order(2958075..2958077,2958204..2958206)
+ /locus_tag="SARI_03028"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:143635"
+ misc_feature order(2958090..2958092,2958099..2958104,2958114..2958116,
+ 2958126..2958128,2958192..2958194,2958198..2958209)
+ /locus_tag="SARI_03028"
+ /note="active site"
+ /db_xref="CDD:143635"
+ misc_feature order(2958180..2958182,2958264..2958266)
+ /locus_tag="SARI_03028"
+ /note="I-site; other site"
+ /db_xref="CDD:143635"
+ gene 2958591..2959379
+ /locus_tag="SARI_03029"
+ CDS 2958591..2959379
+ /locus_tag="SARI_03029"
+ /inference="protein motif:HMMPfam:IPR008090"
+ /inference="similar to AA sequence:INSD:CAD03388.1"
+ /note="'KEGG: gbe:GbCGDNIH1_2380 0.00017 ferric
+ hydroxamate reductase FhuF K00521;
+ COG: COG4114 Uncharacterized Fe-S protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="ferric iron reductase involved in ferric
+ hydroximate transport"
+ /protein_id="YP_001572012.1"
+ /db_xref="GI:161504900"
+ /db_xref="InterPro:IPR008090"
+ /translation="MAYRSAPIADDIIWRAALQPEDGSLAEAVREAIANTREHLLDFI
+ RLDKTPPPTAMTLAQWTRPATFRSLLAAYSDHIYRNTPGLPRENKPLLSLWAQWYIGL
+ MAPPLMLALLTQARAINVSAEHIHVEFHETGRAACFWLDVHQDNLTTMRSPAERMETL
+ IVSALQPVVQALETTGDINAKLIWSNTGYLINWYLTEMKPLLGEALLATLRQRCFFEK
+ RLSNGQDNPLWRTVVMRDGLLVRRTCCQRYRLPDVQQCGDCTLK"
+ misc_feature 2958591..2959376
+ /locus_tag="SARI_03029"
+ /note="ferric iron reductase involved in ferric
+ hydroximate transport; Provisional; Region: PRK10647"
+ /db_xref="CDD:182616"
+ misc_feature 2958867..2959307
+ /locus_tag="SARI_03029"
+ /note="Ferric iron reductase FhuF-like transporter;
+ Region: FhuF; pfam06276"
+ /db_xref="CDD:218968"
+ misc_feature 2959311..2959376
+ /locus_tag="SARI_03029"
+ /note="FhuF 2Fe-2S C-terminal domain; Region: FhuF_C;
+ pfam11575"
+ /db_xref="CDD:152011"
+ gene 2959542..2960000
+ /locus_tag="SARI_03030"
+ CDS 2959542..2960000
+ /locus_tag="SARI_03030"
+ /inference="protein motif:HMMPfam:IPR007214"
+ /inference="similar to AA sequence:INSD:AAL23367.1"
+ /note="'KEGG: bcl:ABC2234 3.6e-08 proS, pro; prolyl-tRNA
+ synthetase K01881;
+ COG: COG2606 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572013.2"
+ /db_xref="GI:448236270"
+ /db_xref="InterPro:IPR007214"
+ /translation="MSLQSVRQFLADHAPDIEIIELNQSTATVELAAKAHNVEPGQIA
+ KTLSLKVKDTIILVVAKGDARMDNKKLKTTFGAKARMLNSDEVVNATGHPVGGVCPFG
+ LEHPLPVYCDVSLKGYSEVLPAAGSTHSAVRIAPQRMAELTSATWVDVCQ"
+ misc_feature 2959548..2959991
+ /locus_tag="SARI_03030"
+ /note="This CD, composed mainly of bacterial single-domain
+ proteins, includes the Thermus thermophilus (Tt) YbaK-like
+ protein, a homolog of the trans-acting Escherichia coli
+ YbaK Cys-tRNA(Pro) deacylase and the Agrobacterium
+ tumefaciens ProX Ala-tRNA(Pro)...; Region:
+ ProX_deacylase; cd04333"
+ /db_xref="CDD:239825"
+ misc_feature order(2959674..2959676,2959827..2959832,2959911..2959913)
+ /locus_tag="SARI_03030"
+ /note="putative deacylase active site [active]"
+ /db_xref="CDD:239825"
+ gene complement(2960017..2960640)
+ /locus_tag="SARI_03031"
+ CDS complement(2960017..2960640)
+ /locus_tag="SARI_03031"
+ /inference="protein motif:BlastProDom:IPR000792"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000792"
+ /inference="protein motif:HMMSmart:IPR000792"
+ /inference="protein motif:superfamily:IPR011006"
+ /inference="similar to AA sequence:INSD:CAD03386.1"
+ /note="regulator for the transport and utilization of the
+ aromatic beta-glucosides arbutin and silicin"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional activator BglJ"
+ /protein_id="YP_001572014.1"
+ /db_xref="GI:161504902"
+ /db_xref="InterPro:IPR000792"
+ /db_xref="InterPro:IPR011006"
+ /db_xref="InterPro:IPR011991"
+ /translation="MSNVGFKGLFDAMPDCRYTLHIFSKPSAFYKAALKTPFSAVIFS
+ LSALRTERRTGLACLTELAINYPHMRRLVIADDDSEARLISALSPLPLDGVISKASPL
+ DVLQDALFTSLNGARRTTERTESLWEFHQNCMLSPTEREILRFMSNGYSMPQIAVQLE
+ RNIKTIRAHKFNVMSKLGVSSDAGLLDAADILVYLRVGDGTALQHRV"
+ misc_feature complement(2960020..2960640)
+ /locus_tag="SARI_03031"
+ /note="DNA-binding transcriptional activator BglJ;
+ Provisional; Region: PRK11475"
+ /db_xref="CDD:236915"
+ misc_feature complement(2960074..2960238)
+ /locus_tag="SARI_03031"
+ /note="C-terminal DNA-binding domain of LuxR-like
+ proteins. This domain contains a helix-turn-helix motif
+ and binds DNA. Proteins belonging to this group are
+ response regulators; some act as transcriptional
+ activators, others as transcriptional repressors. Many...;
+ Region: LuxR_C_like; cd06170"
+ /db_xref="CDD:99777"
+ misc_feature complement(order(2960095..2960097,2960128..2960142,
+ 2960146..2960151,2960155..2960160,2960182..2960190,
+ 2960227..2960235))
+ /locus_tag="SARI_03031"
+ /note="DNA binding residues [nucleotide binding]"
+ /db_xref="CDD:99777"
+ misc_feature complement(order(2960080..2960082,2960089..2960097,
+ 2960188..2960190,2960194..2960196,2960200..2960202))
+ /locus_tag="SARI_03031"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99777"
+ gene complement(2960640..2961377)
+ /locus_tag="SARI_03032"
+ CDS complement(2960640..2961377)
+ /locus_tag="SARI_03032"
+ /inference="protein motif:BlastProDom:IPR000792"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000792"
+ /inference="protein motif:HMMSmart:IPR000792"
+ /inference="protein motif:superfamily:IPR011006"
+ /inference="similar to AA sequence:REFSEQ:NP_463406.1"
+ /note="'COG: NOG09075 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572015.1"
+ /db_xref="GI:161504903"
+ /db_xref="InterPro:IPR000792"
+ /db_xref="InterPro:IPR011006"
+ /db_xref="InterPro:IPR011991"
+ /translation="MLPGCCKNGLIISKIPLIQEGLKGAITGNFPDYKLAYCRTIEEL
+ TLLQIRRSNLVIADLAVNNASPRAICEYFYSLLSQYRDIHWVFLVPKPCYPYAVDLLM
+ GPVSTLLSDEEPIDNLISVIRAGHAYSERISKTLLSPQVPSEIQEHGSKPIILTLSER
+ KVLRLLGKGWGINQIAALLKKSNKTISAQKNSAMRRLSIHSNAEMYAWINSSQGAREL
+ NLPSIYGETMEWKTESAREMLRSSKSV"
+ misc_feature complement(2960766..2961350)
+ /locus_tag="SARI_03032"
+ /note="Response regulator containing a CheY-like receiver
+ domain and an HTH DNA-binding domain [Signal transduction
+ mechanisms / Transcription]; Region: CitB; COG2197"
+ /db_xref="CDD:225107"
+ misc_feature complement(2960745..2960915)
+ /locus_tag="SARI_03032"
+ /note="C-terminal DNA-binding domain of LuxR-like
+ proteins. This domain contains a helix-turn-helix motif
+ and binds DNA. Proteins belonging to this group are
+ response regulators; some act as transcriptional
+ activators, others as transcriptional repressors. Many...;
+ Region: LuxR_C_like; cd06170"
+ /db_xref="CDD:99777"
+ misc_feature complement(order(2960772..2960774,2960805..2960819,
+ 2960823..2960828,2960832..2960837,2960859..2960867,
+ 2960904..2960912))
+ /locus_tag="SARI_03032"
+ /note="DNA binding residues [nucleotide binding]"
+ /db_xref="CDD:99777"
+ misc_feature complement(order(2960745..2960750,2960757..2960759,
+ 2960766..2960774,2960865..2960867,2960871..2960873,
+ 2960877..2960879))
+ /locus_tag="SARI_03032"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99777"
+ gene complement(2961820..2962083)
+ /locus_tag="SARI_03034"
+ CDS complement(2961820..2962083)
+ /locus_tag="SARI_03034"
+ /note="'Psort location: extracellular, including cell
+ wall, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572016.1"
+ /db_xref="GI:161504905"
+ /translation="MTRPVRKDILCAITMTETFFLTRSAGVMALVKINFLLMKMLPTM
+ HKPLEVCATSQAGYLHGRLFSYVRFQNRDIMTAGPFIFESIIW"
+ gene 2962082..2962858
+ /locus_tag="SARI_03033"
+ CDS 2962082..2962858
+ /locus_tag="SARI_03033"
+ /inference="protein motif:HMMPfam:IPR010619"
+ /inference="similar to AA sequence:INSD:AAL23364.1"
+ /note="'COG: COG2966 Uncharacterized conserved protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572017.1"
+ /db_xref="GI:161504904"
+ /db_xref="InterPro:IPR010619"
+ /translation="MQEEQSIQRTVTRLCIQCGLFLLQHGAESALVDELSTRLGLALG
+ MDSVESAISSNAIVLTTIKDGQCLTSTRKNQDHGINMHVVTEVQHIVILAEHRLLDYK
+ GVEKRFSQLRPLRYPRWLVAVMVGLSCACFCKLNNGGWDGALITFFASMIAMYIRQML
+ AQRHLHPQINFCITAFIATTISGLMLTLPAFSQTPTIAMAASVLLLVPGFPLINSVAD
+ MFKGHINTGLARWAIASLLTLATCIGVVMSMTVWGLRGWV"
+ misc_feature 2962082..2962813
+ /locus_tag="SARI_03033"
+ /note="Uncharacterized conserved protein [Function
+ unknown]; Region: COG2966"
+ /db_xref="CDD:225514"
+ misc_feature 2962133..2962708
+ /locus_tag="SARI_03033"
+ /note="Protein of unknown function (DUF1212); Region:
+ DUF1212; pfam06738"
+ /db_xref="CDD:219154"
+ gene 2962849..2963322
+ /locus_tag="SARI_03035"
+ CDS 2962849..2963322
+ /locus_tag="SARI_03035"
+ /inference="similar to AA sequence:INSD:AAL23363.1"
+ /note="'COG: COG3610 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572018.1"
+ /db_xref="GI:161504906"
+ /translation="MGIIDFFMALMQDMILSAIPAVGFAMVFNVPHRALPWCALLGAL
+ GHGSRMLMMSAGFNIEWSTFMASLLVGSIGIQWSRWYLAHPKVFTVAAVIPMFPGISA
+ YTAMISAVKISHLGYSEPMMITLLTNFLKASSIVGALSIGLSVPGLWLYRKRPRV"
+ misc_feature 2962849..2963319
+ /locus_tag="SARI_03035"
+ /note="hypothetical protein; Provisional; Region:
+ PRK09917"
+ /db_xref="CDD:182143"
+ gene 2963416..2963955
+ /locus_tag="SARI_03036"
+ CDS 2963416..2963955
+ /locus_tag="SARI_03036"
+ /inference="similar to AA sequence:INSD:AAV80084.1"
+ /note="'This protein is required for primosome-dependent
+ normal DNA replication; it is also involved in inducing
+ stable DNA replication during SOS response. It forms, in
+ concert with dnaB protein and other prepriming proteins
+ dnaC, N, N', N'' a prepriming protein complex on the
+ specific site of the template DNA recognized by protein
+ N''"
+ /codon_start=1
+ /transl_table=11
+ /product="primosomal protein DnaI"
+ /protein_id="YP_001572019.1"
+ /db_xref="GI:161504907"
+ /translation="MSSRILTSDVIGIDALLHDHHAVLAKSTGGAVAVFANNAPAFYA
+ VTPARMAELLALEEKLSHPGSDVALDAQFYEEPETAHVAIPCGKFAMYPAWQPDADFQ
+ RQAALWGVALRDPVTAEELAAFIAYWQAEGKVFHHIQWQQKLARSVQISRSSNGGMPQ
+ RDINSVSEPDNHIPPGFRG"
+ misc_feature 2963416..2963952
+ /locus_tag="SARI_03036"
+ /note="primosomal protein DnaI; Provisional; Region:
+ PRK02854"
+ /db_xref="CDD:179484"
+ gene 2963958..2964695
+ /locus_tag="SARI_03037"
+ CDS 2963958..2964695
+ /locus_tag="SARI_03037"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="similar to AA sequence:INSD:AAV80083.1"
+ /note="acts to load the DnaB helicase onto the initiation
+ site during DNA replication"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA replication protein DnaC"
+ /protein_id="YP_001572020.1"
+ /db_xref="GI:161504908"
+ /db_xref="InterPro:IPR003593"
+ /translation="MKNVGDLMQRLQKMMPAHITPAFKTGEELLAWQKAQGEIRAAAL
+ ARENRAMKMQRTFNRSGIRPLHQNCSFDNYRVECDGQMNALSKARQYVDEFDGNIASF
+ VFSGKPGTGKNHLAAAICNELLLRGKSVLIITVADIMSAMKDTFSNRETSEEQLLNDL
+ SNVDLLVIDEIGVQTESRYEKVIINQIVDRRSSSKRPTGMLTNSNMEEMTKMLGERVM
+ DRMRLGNSLWVNFTWDSYRSRVTGKEY"
+ misc_feature 2963958..2964689
+ /locus_tag="SARI_03037"
+ /note="DNA replication protein DnaC; Validated; Region:
+ PRK07952"
+ /db_xref="CDD:181180"
+ misc_feature 2964195..>2964473
+ /locus_tag="SARI_03037"
+ /note="The AAA+ (ATPases Associated with a wide variety of
+ cellular Activities) superfamily represents an ancient
+ group of ATPases belonging to the ASCE (for additional
+ strand, catalytic E) division of the P-loop NTPase fold.
+ The ASCE division also includes ABC; Region: AAA; cd00009"
+ /db_xref="CDD:99707"
+ misc_feature 2964273..2964296
+ /locus_tag="SARI_03037"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature order(2964276..2964299,2964462..2964464)
+ /locus_tag="SARI_03037"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:99707"
+ misc_feature 2964450..2964467
+ /locus_tag="SARI_03037"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:99707"
+ gene 2964997..2967288
+ /locus_tag="SARI_03038"
+ CDS 2964997..2967288
+ /locus_tag="SARI_03038"
+ /inference="protein motif:HMMPfam:IPR000917"
+ /inference="protein motif:superfamily:IPR008930"
+ /note="catalyzes the transfer of phosphoglycerol to the
+ glucan backbone"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphoglycerol transferase I"
+ /protein_id="YP_001572021.1"
+ /db_xref="GI:161504909"
+ /db_xref="InterPro:IPR000917"
+ /db_xref="InterPro:IPR008930"
+ /translation="MSELLSVALFLASVLVYAWKAGRNTWWFAATLTVLGLFVILNIT
+ RYASDYFTGDGINDAVLYTLTNSLTGAGVGKYILPGIGIVLALVGVFGALGWILRRRR
+ HHPHHVGYSLLALLLALGSVDASPAFRQITELVKSQTRDGDPDFAVYYKEPAKTIPNP
+ KLNLVYIYGESLERTYFDNDAFPNLTPELGALKNEGLDFSHTMQLPGTDYTIAGMVAS
+ QCGIPLFAPFEGNASASVSSFFPQNICLGDILKNAGYQNYFVQGANLRFAGKDVFLKS
+ HGFDHLYGAEELKTVVTDPSYRNDWGFYDDTVLDEAWKKFEALSRSGQRFSLFTLTVD
+ THHPDGFISRTCNRKRYDYDSKPNQSFSAVSCSQENIARFINKIKASPWFKDTVIVVS
+ SDHLAMNNTAWKYLNKQDRNNLFFILRGDKPQQETLAVKRNTMDNGATVLDILGGDNF
+ IGLGRSSLSGQSLSEVFLNVKEKVLAMKPDIVRLWNFPKEMKAFTIDQDKNMIAFSGS
+ HFRLPLLLRVSDKRVEPLPESEYSAPLRFQLADFAPRDNFVWVDRCYKMAQLWAPELA
+ LSTDWCVSQGQLGGQQTVQHVDKTQWKGKTAFKDTVIDMQRYKGNVDTLKIVDNDIRY
+ KADSFIFNVAGAPEEVKQFSGISRPETWGRWSNAQLGDEVKIEYKAPLPKKFDLVITA
+ KAFGDNANRPIPVRVGNEEQTLVLGHDVSTTTLHFNNPTDASTLVIAPPVPVSTNEGN
+ ILGHSPRKLGIGMVEIKVVNAES"
+ misc_feature 2965051..2967282
+ /locus_tag="SARI_03038"
+ /note="phosphoglycerol transferase I; Provisional; Region:
+ PRK03776"
+ /db_xref="CDD:179648"
+ misc_feature 2965069..2967246
+ /locus_tag="SARI_03038"
+ /note="Phosphoglycerol transferase and related proteins,
+ alkaline phosphatase superfamily [Cell envelope
+ biogenesis, outer membrane]; Region: MdoB; COG1368"
+ /db_xref="CDD:224287"
+ gene complement(2967387..2968397)
+ /locus_tag="SARI_03039"
+ CDS complement(2967387..2968397)
+ /locus_tag="SARI_03039"
+ /inference="protein motif:HMMPfam:IPR001347"
+ /inference="similar to AA sequence:REFSEQ:NP_463399.2"
+ /note="'KEGG: lwe:lwe2018 1.1e-43 sugar isomerase domain
+ protein;
+ COG: COG2222 Predicted phosphosugar isomerases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572022.1"
+ /db_xref="GI:161504910"
+ /db_xref="InterPro:IPR001347"
+ /translation="MLGFNQDEYLTSAREIIAARQKAEQVADEIYQAGFSSLFFASVG
+ GSLAPMMAINEFAKELTTLPVYIEQAAELIHKGNKRLNKYSVVVTLSKSGDTKESVAI
+ AEWCKAQGIRVVAITKNADSPLAQAATWHIPMRHKNGVEYEYMLLYWLFFRVLSRNNE
+ FASYDRFASQLETLPANLLNAKQKFDPQADAIASRYFNSEYMMWVGGAEMWGEVYLFS
+ MCILEEMQWKRTRPVSSAEFFHGALELLEKDVPLILVKGEGKCRSLDERVERFASNIT
+ ENLVVIDPQEYALEGVDEAFRWIMAPCVVSTLLVDRLAAHFEKYTGHSLDIRRYYRQF
+ EY"
+ misc_feature complement(2967390..2968397)
+ /locus_tag="SARI_03039"
+ /note="Predicted phosphosugar isomerases [Cell envelope
+ biogenesis, outer membrane]; Region: AgaS; COG2222"
+ /db_xref="CDD:225132"
+ misc_feature complement(2967933..2968289)
+ /locus_tag="SARI_03039"
+ /note="A subgroup of the SIS domain. SIS (Sugar ISomerase)
+ domains are found in many phosphosugar isomerases and
+ phosphosugar binding proteins. SIS domains are also found
+ in proteins that regulate the expression of genes involved
+ in synthesis of phosphosugars; Region: SIS_1; cd05710"
+ /db_xref="CDD:240214"
+ misc_feature complement(order(2968125..2968127,2968260..2968262))
+ /locus_tag="SARI_03039"
+ /note="putative active site [active]"
+ /db_xref="CDD:240214"
+ misc_feature complement(2967402..2967839)
+ /locus_tag="SARI_03039"
+ /note="SIS domain. SIS (Sugar ISomerase) domains are found
+ in many phosphosugar isomerases and phosphosugar binding
+ proteins. SIS domains are also found in proteins that
+ regulate the expression of genes involved in synthesis of
+ phosphosugars; Region: SIS; cl00389"
+ /db_xref="CDD:241833"
+ gene complement(2968415..2969464)
+ /locus_tag="SARI_03040"
+ CDS complement(2968415..2969464)
+ /locus_tag="SARI_03040"
+ /inference="protein motif:HMMPfam:IPR001347"
+ /inference="similar to AA sequence:REFSEQ:NP_463398.1"
+ /note="'KEGG: lwe:lwe2019 6.4e-50
+ glucosamine--fructose-6-phosphate aminotransferase ,
+ putative K00820;
+ COG: COG0449 Glucosamine 6-phosphate synthetase, contains
+ amidotransferase and phosphosugar isomerase domains;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572023.1"
+ /db_xref="GI:161504911"
+ /db_xref="InterPro:IPR001347"
+ /translation="MLTYINEEADVLANIICRHRQSLDEVSRFVSQKPLRRILILATG
+ SSLNAAFCARYFFEYCGITVDIKEPYTFSHYENSDPQADMVIAISQSGKSASTLEAMR
+ KVQDLGRPVFALTADPQSPLGKASDCPLDILTGIESVGFVTRGFSATVLNLLLIALLI
+ ARRQQCLTESQVEEYEAQLQRIAATLPLVIARTEAFIRQHRAVLQNGTRFVAIGYGAL
+ VGVAKEFETKFTETVRVPSSGFELEAYMHGPYLEANAEHVMFFFEDRPDARSRALREY
+ MTPAVAKTFTLTLAKAAQDDQTLALDVAVDHHFSPLLLIVPVQLMAFHIASLKGIDLA
+ VRIFDDFDRVLKSKI"
+ misc_feature complement(2968424..2969464)
+ /locus_tag="SARI_03040"
+ /note="Predicted phosphosugar isomerases [Cell envelope
+ biogenesis, outer membrane]; Region: AgaS; COG2222"
+ /db_xref="CDD:225132"
+ misc_feature complement(2969009..2969356)
+ /locus_tag="SARI_03040"
+ /note="SIS (Sugar ISomerase) domain repeat 1 found in
+ Glucosamine 6-phosphate synthase (GlmS) and
+ Glucosamine-6-phosphate deaminase (GlmD). The SIS domain
+ is found in many phosphosugar isomerases and phosphosugar
+ binding proteins. GlmS contains a N-terminal...; Region:
+ SIS_GlmS_GlmD_1; cd05008"
+ /db_xref="CDD:240141"
+ misc_feature complement(order(2969177..2969179,2969243..2969245,
+ 2969252..2969254,2969264..2969266,2969270..2969272,
+ 2969291..2969293,2969300..2969305,2969333..2969338))
+ /locus_tag="SARI_03040"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:240141"
+ misc_feature complement(order(2969192..2969200,2969327..2969332))
+ /locus_tag="SARI_03040"
+ /note="active site"
+ /db_xref="CDD:240141"
+ misc_feature complement(2968439..2968876)
+ /locus_tag="SARI_03040"
+ /note="SIS (Sugar ISomerase) domain repeat 2 found in
+ Glucosamine 6-phosphate synthase (GlmS) and
+ Glucosamine-6-phosphate deaminase (GlmD). The SIS domain
+ is found in many phosphosugar isomerases and phosphosugar
+ binding proteins. GlmS contains a N-terminal...; Region:
+ SIS_GlmS_GlmD_2; cd05009"
+ /db_xref="CDD:240142"
+ misc_feature complement(order(2968451..2968456,2968637..2968642,
+ 2968646..2968648,2968658..2968663,2968706..2968717,
+ 2968721..2968729,2968733..2968735,2968745..2968747,
+ 2968751..2968753,2968757..2968759,2968763..2968765,
+ 2968775..2968777,2968817..2968819))
+ /locus_tag="SARI_03040"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:240142"
+ misc_feature complement(order(2968772..2968774,2968781..2968783))
+ /locus_tag="SARI_03040"
+ /note="active site"
+ /db_xref="CDD:240142"
+ gene complement(2969489..2970331)
+ /locus_tag="SARI_03041"
+ CDS complement(2969489..2970331)
+ /locus_tag="SARI_03041"
+ /inference="protein motif:HMMPfam:IPR004704"
+ /inference="similar to AA sequence:REFSEQ:YP_219377.1"
+ /note="'KEGG: hso:HS_0607 1.1e-54 manZ;
+ protein-N(pi)-phosphohistidine-sugar phosphotransferase
+ (mannose-specific phosphotransferase system IID component)
+ K02796;
+ COG: COG3716 Phosphotransferase system,
+ mannose/fructose/N-acetylgalactosamine-specific component
+ IID;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572024.1"
+ /db_xref="GI:161504912"
+ /db_xref="InterPro:IPR004704"
+ /translation="MKMISDKDRQQAENTELVTARDLRRVFWRSFQMEFSWNYERQMN
+ LAFVYTLIPVLKKLYSRKEDLAEALKRHLAFFNTTPHIVTLILGITVAMEEKNSQQKE
+ MDASSIDNVKASLMGPLAGIGDSFFWGTLRLIATGIGTSLALKGNVLGPILFLLVFNV
+ PHILARWFFTRWGYVLGTGVLQRIQQSGMMESLTYGASIIGLMVVGAMTASMIDITIP
+ ITFGTGDAKTHVQDIINDIMPCLLPLISFAIVYWLLGKKVKPLTIIGGIALVGIFGSW
+ IGLF"
+ misc_feature complement(2969492..2970298)
+ /locus_tag="SARI_03041"
+ /note="Phosphotransferase system,
+ mannose/fructose/N-acetylgalactosamine-specific component
+ IID [Carbohydrate transport and metabolism]; Region: ManZ;
+ COG3716"
+ /db_xref="CDD:226239"
+ gene complement(2970315..2971094)
+ /locus_tag="SARI_03042"
+ CDS complement(2970315..2971094)
+ /locus_tag="SARI_03042"
+ /inference="protein motif:HMMPfam:IPR004700"
+ /inference="similar to AA sequence:INSD:AAL23355.1"
+ /note="'KEGG: lsl:LSL_1715 2.0e-32 PTS system,
+ mannose-specific IIC component K00890;
+ COG: COG3715 Phosphotransferase system,
+ mannose/fructose/N-acetylgalactosamine-specific component
+ IIC;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572025.1"
+ /db_xref="GI:161504913"
+ /db_xref="InterPro:IPR004700"
+ /translation="MVEALLLGLVAFIAQSEYALGTSLISRPIVTGLLTGLVLGDMET
+ GIVMGATLELAFIGSFSVGASLPPDVVTGGILGVAFAINSGAGTETVLLLGLPIATLA
+ LIVKNIYNGMFIPLLCHKADAYAEVGNTRGIERMHLISGIGLSLTLGIIVTVSYLAGV
+ NVVKGFLDAIPEFIKHGLSVATGIIPALGFAMLARLLINKKVAPYFFLGFILMAYLKI
+ PVTGIAILGAIVAVVMVNMPKLAASQPAPAQGASHDDEDDF"
+ misc_feature complement(2970375..2971094)
+ /locus_tag="SARI_03042"
+ /note="Phosphotransferase system,
+ mannose/fructose/N-acetylgalactosamine-specific component
+ IIC [Carbohydrate transport and metabolism]; Region: ManY;
+ COG3715"
+ /db_xref="CDD:226238"
+ gene complement(2971120..2971581)
+ /locus_tag="SARI_03043"
+ CDS complement(2971120..2971581)
+ /locus_tag="SARI_03043"
+ /inference="protein motif:BlastProDom:IPR004720"
+ /inference="protein motif:Gene3D:IPR004720"
+ /inference="protein motif:HMMPfam:IPR004720"
+ /inference="protein motif:superfamily:IPR004720"
+ /inference="similar to AA sequence:REFSEQ:YP_219375.1"
+ /note="'KEGG: sec:SC4388 9.2e-74 ptrB; putative PTS
+ permease K02794;
+ COG: COG3444 Phosphotransferase system,
+ mannose/fructose/N-acetylgalactosamine-specific component
+ IIB;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572026.1"
+ /db_xref="GI:161504914"
+ /db_xref="InterPro:IPR004720"
+ /translation="MIVFLRVDHRLLHGQVAFSWTQYVGADCILIANDSVPNDDLRKT
+ TIKMAKPPAVKLVIKNIADSIEAIKSGVTDKYKLFIVVESVADACHLARELPDIKSIN
+ LGGTKVREGSQNIAKAINLLADEMTQLRELAAGGVEVEIRLVPNDRKQLFA"
+ misc_feature complement(2971126..2971578)
+ /locus_tag="SARI_03043"
+ /note="PTS_IIB, PTS system, Mannose/sorbose specific IIB
+ subunit. The bacterial phosphoenolpyruvate: sugar
+ phosphotransferase system (PTS) is a multi-protein system
+ involved in the regulation of a variety of metabolic and
+ transcriptional processes. This family...; Region:
+ PTS_IIB_man; cd00001"
+ /db_xref="CDD:237975"
+ misc_feature complement(order(2971543..2971545,2971552..2971554,
+ 2971564..2971566))
+ /locus_tag="SARI_03043"
+ /note="active site"
+ /db_xref="CDD:237975"
+ misc_feature complement(2971543..2971545)
+ /locus_tag="SARI_03043"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:237975"
+ gene complement(2971596..2972018)
+ /locus_tag="SARI_03044"
+ CDS complement(2971596..2972018)
+ /locus_tag="SARI_03044"
+ /inference="protein motif:Gene3D:IPR004701"
+ /inference="protein motif:HMMPfam:IPR004701"
+ /inference="protein motif:superfamily:IPR004701"
+ /inference="similar to AA sequence:INSD:AAL23353.1"
+ /note="'KEGG: sec:SC4387 5.6e-67 putative PTS permease
+ K02793;
+ COG: COG2893 Phosphotransferase system,
+ mannose/fructose-specific component IIA;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572027.1"
+ /db_xref="GI:161504915"
+ /db_xref="InterPro:IPR004701"
+ /translation="MKRHYIFASHGTLASGVLNSVELILGKRSNVWTLCAYVEEDMDL
+ SQQVDMLIAQIPPEDEIIALTDIFAGSVNNEFIRYLSRANFHLLAGINLPLVIDLFMS
+ ENDGNTTHTIITALEDSKENIQYCNQTITSAMQSDKDF"
+ misc_feature complement(2971653..2972012)
+ /locus_tag="SARI_03044"
+ /note="PTS_IIA, PTS system, mannose/sorbose specific IIA
+ subunit. The bacterial phosphoenolpyruvate: sugar
+ phosphotransferase system (PTS) is a multi-protein system
+ involved in the regulation of a variety of metabolic and
+ transcriptional processes. This family...; Region:
+ PTS_IIA_man; cd00006"
+ /db_xref="CDD:237978"
+ misc_feature complement(order(2971716..2971718,2971806..2971808,
+ 2971911..2971913,2971944..2971949,2971989..2971991))
+ /locus_tag="SARI_03044"
+ /note="active pocket/dimerization site; other site"
+ /db_xref="CDD:237978"
+ misc_feature complement(order(2971806..2971808,2971821..2971823,
+ 2971989..2971991))
+ /locus_tag="SARI_03044"
+ /note="active site"
+ /db_xref="CDD:237978"
+ misc_feature complement(2971989..2971991)
+ /locus_tag="SARI_03044"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:237978"
+ gene complement(2972119..2974884)
+ /locus_tag="SARI_03045"
+ CDS complement(2972119..2974884)
+ /locus_tag="SARI_03045"
+ /inference="protein motif:Gene3D:IPR004701"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR002078"
+ /inference="protein motif:HMMPfam:IPR011608"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR002078"
+ /inference="protein motif:ScanRegExp:IPR002464"
+ /inference="protein motif:superfamily:IPR004701"
+ /note="'KEGG: reh:H16_A2683 3.3e-28 response regulator
+ containing CheY-like receiver, AAA-type ATPase, and
+ DNA-binding domains K01529;
+ COG: COG3933 Transcriptional antiterminator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572028.1"
+ /db_xref="GI:161504916"
+ /db_xref="InterPro:IPR002078"
+ /db_xref="InterPro:IPR002464"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR004701"
+ /db_xref="InterPro:IPR011608"
+ /db_xref="InterPro:IPR011991"
+ /translation="MRKDALLAFLMNQTDFFDPENVSEVFTARYLAQRFNMQRNTASH
+ YLNQLVAQGVLCKINTRPVYFLHKQAFSQQFFTLSRNEYASIAELLAHGEQECVPDDH
+ FSLLIGHNESLKRPIEQLKTALFYPDGGLPLLMTGESGTGKSYLARLMHEYAVTQALL
+ PPDAPFISFNCAQYASNPELLAANLFGYVKGAFTGAQSDRPGAFEAADGGMLFLDEVH
+ RLSAEGQEKLFTWLDCGEIYRVGDTAQGHPVSVRLVFATTEEIHSTFLTTFLRRIPIQ
+ VNLPDLQHRSRQEKEALILLFFWTEAKKLSATLILRPRLLQILNQYVYRGNVGELKNV
+ VKYAVATAWAKKPGQETVTVSLHDLPDAMLSALPSLNEPLTDDAPVSITPDTNLTWLL
+ RARDEMQGMIHDTQCHVLALYELVRSGKEGWETVQKRMGDEIETLFDRLIFTGDDNVH
+ SQRLLLITSQVREEFYRLEKRFNMQLNGNCIYALSHYLIHRTAQAPSRLNSEQIRQLD
+ AFLAQKYPLLYSFCLQILETLSQKLDLEPRRIDILLLALWLHKQGVNSQKQVTHAVIL
+ AHGYATASSIANVANRLLKNTIFESFDMPLDVTPGAIAQQVMRYLEGHPLASGLIILV
+ DMGSLKAIHRHFDRALSTPVTIINNVSTSMALYVGERILQGHFIEEIARDIARDVPVE
+ YQLYWPKSNKPRAILTTCATGIGVATNLCSLLSASIPQALEIDVVACDYAMLANNKTQ
+ EPVFIRYDVLAIVGTLDPHIASVPWISLDSLISGEGNQYLMRLFGSLTTPDQVAEINN
+ LLLKNFSLRRVIESVTILDTSKVINHVEQFLLRYEHLAGVTVSNERKVALYVHISCLI
+ ERLIRHAGITTWSGQQCPEHELNRLREAFSVIESNYSVKIPTAELGYIHNILTFETDF
+ IEQDQQF"
+ misc_feature complement(2973532..2974827)
+ /locus_tag="SARI_03045"
+ /note="Transcriptional regulators containing an AAA-type
+ ATPase domain and a DNA-binding domain [Transcription /
+ Signal transduction mechanisms]; Region: PspF; COG1221"
+ /db_xref="CDD:224142"
+ misc_feature complement(2974045..2974536)
+ /locus_tag="SARI_03045"
+ /note="The AAA+ (ATPases Associated with a wide variety of
+ cellular Activities) superfamily represents an ancient
+ group of ATPases belonging to the ASCE (for additional
+ strand, catalytic E) division of the P-loop NTPase fold.
+ The ASCE division also includes ABC; Region: AAA; cd00009"
+ /db_xref="CDD:99707"
+ misc_feature complement(2974453..2974476)
+ /locus_tag="SARI_03045"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(order(2974111..2974113,2974240..2974242,
+ 2974450..2974473))
+ /locus_tag="SARI_03045"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(2974237..2974254)
+ /locus_tag="SARI_03045"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(2974069..2974071)
+ /locus_tag="SARI_03045"
+ /note="arginine finger; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(2972134..2973504)
+ /locus_tag="SARI_03045"
+ /note="Transcriptional antiterminator [Transcription];
+ Region: COG3933"
+ /db_xref="CDD:226443"
+ misc_feature complement(2972845..2973201)
+ /locus_tag="SARI_03045"
+ /note="PTS_IIA, PTS system, mannose/sorbose specific IIA
+ subunit. The bacterial phosphoenolpyruvate: sugar
+ phosphotransferase system (PTS) is a multi-protein system
+ involved in the regulation of a variety of metabolic and
+ transcriptional processes. This family...; Region:
+ PTS_IIA_man; cd00006"
+ /db_xref="CDD:237978"
+ misc_feature complement(order(2972905..2972907,2973001..2973003,
+ 2973103..2973105,2973133..2973138,2973181..2973183))
+ /locus_tag="SARI_03045"
+ /note="active pocket/dimerization site; other site"
+ /db_xref="CDD:237978"
+ misc_feature complement(order(2973001..2973003,2973010..2973012,
+ 2973181..2973183))
+ /locus_tag="SARI_03045"
+ /note="active site"
+ /db_xref="CDD:237978"
+ misc_feature complement(2973181..2973183)
+ /locus_tag="SARI_03045"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:237978"
+ misc_feature complement(2972173..2972409)
+ /locus_tag="SARI_03045"
+ /note="PRD domain; Region: PRD; pfam00874"
+ /db_xref="CDD:201484"
+ gene 2974972..2975124
+ /locus_tag="SARI_03046"
+ CDS 2974972..2975124
+ /locus_tag="SARI_03046"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572029.1"
+ /db_xref="GI:161504917"
+ /translation="MWITAHPSPNAGLAKTTATALLPGVTSEKRGRGGARHAYESRCA
+ MRLMLV"
+ gene complement(2975234..2976895)
+ /locus_tag="SARI_03047"
+ CDS complement(2975234..2976895)
+ /locus_tag="SARI_03047"
+ /inference="protein motif:FPrintScan:IPR004090"
+ /inference="protein motif:HMMPfam:IPR003122"
+ /inference="protein motif:HMMPfam:IPR003660"
+ /inference="protein motif:HMMPfam:IPR004089"
+ /inference="protein motif:HMMSmart:IPR003122"
+ /inference="protein motif:HMMSmart:IPR003660"
+ /inference="protein motif:HMMSmart:IPR004089"
+ /inference="protein motif:ScanRegExp:IPR004091"
+ /inference="protein motif:superfamily:IPR012338"
+ /inference="similar to AA sequence:REFSEQ:YP_153392.1"
+ /note="'KEGG: syn:sll1871 1.8e-06 hik6; two-component
+ sensor histidine kinase K02486;
+ COG: COG0840 Methyl-accepting chemotaxis protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572030.1"
+ /db_xref="GI:161504918"
+ /db_xref="InterPro:IPR003122"
+ /db_xref="InterPro:IPR003660"
+ /db_xref="InterPro:IPR004089"
+ /db_xref="InterPro:IPR004090"
+ /db_xref="InterPro:IPR004091"
+ /db_xref="InterPro:IPR012338"
+ /translation="MLKRIKIVTSLLLVLALFGLLQLTSGGLFFNSLKNDKENFTVLQ
+ TIRQQQSALNATWVELLQTRNTLNRAGIRWMMDQSNIGSGATVAELMQGAANTLKLVE
+ KSWAQYESLPRDPRQSEAAFLEIKRTYDIYHGALAELIQLLGAGKINEFFDQPTQSYQ
+ DAFEKQYMAYMQQNDRLYDIAVEDNNSSYNQAMWVLVSVLIAVLVVIIAVWFGIKLSL
+ IAPMNRLIESIRHIASGDLVKRIDVEGSNEMGQLADNLRHMQSELVRTVGDVRNGANA
+ IYSGASEIAMGNNDLSSRTEQQAASLEETAASMEQLTATVKQNAENARQASHLALSAS
+ ETAQKGGKVVDNVVQTMRDIASSSQKIADIISVIDGIAFQTNILALNAAVEAARAGEQ
+ GRGFAVVAGEVRTLASRSAQAAREIKSLIEDSVSRVDVGSTLVESAGETMDEIVNAVT
+ RVTDIMGEIASASDEQSRGIDQVGLAVAEMDRVTQQNASLVEESAAAAAALEEQASRL
+ TQAVAVFRIQQEQQRARDVAAVKTSAAVPPRKAAVADDSDNWETF"
+ misc_feature complement(2975237..2976895)
+ /locus_tag="SARI_03047"
+ /note="methyl-accepting chemotaxis protein I; Provisional;
+ Region: PRK15041"
+ /db_xref="CDD:185001"
+ misc_feature complement(2976371..2976766)
+ /locus_tag="SARI_03047"
+ /note="ligand binding domain of Tar- and Tsr-related
+ chemoreceptors; Region: Tar_Tsr_LBD; cd00181"
+ /db_xref="CDD:206638"
+ misc_feature complement(order(2976416..2976418,2976425..2976430,
+ 2976434..2976436,2976440..2976445,2976668..2976673,
+ 2976677..2976682,2976689..2976694,2976701..2976706,
+ 2976710..2976715,2976722..2976727,2976755..2976757,
+ 2976764..2976766))
+ /locus_tag="SARI_03047"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:206638"
+ misc_feature complement(order(2976428..2976430,2976434..2976436,
+ 2976440..2976445,2976677..2976679,2976689..2976691,
+ 2976704..2976706))
+ /locus_tag="SARI_03047"
+ /note="ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:206638"
+ misc_feature complement(2976101..2976244)
+ /locus_tag="SARI_03047"
+ /note="Histidine kinase, Adenylyl cyclase,
+ Methyl-accepting protein, and Phosphatase (HAMP) domain.
+ HAMP is a signaling domain which occurs in a wide variety
+ of signaling proteins, many of which are bacterial. The
+ HAMP domain consists of two alpha helices...; Region:
+ HAMP; cd06225"
+ /db_xref="CDD:100122"
+ misc_feature complement(order(2976107..2976112,2976119..2976124,
+ 2976128..2976133,2976140..2976145,2976149..2976154,
+ 2976200..2976202,2976206..2976211,2976218..2976223,
+ 2976227..2976232,2976239..2976244))
+ /locus_tag="SARI_03047"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:100122"
+ misc_feature complement(2975435..2976010)
+ /locus_tag="SARI_03047"
+ /note="Methyl-accepting chemotaxis protein (MCP),
+ signaling domain; Region: MCP_signal; cd11386"
+ /db_xref="CDD:206779"
+ misc_feature complement(order(2975435..2975440,2975447..2975449,
+ 2975456..2975461,2975465..2975470,2975477..2975482,
+ 2975486..2975491,2975498..2975500,2975507..2975512,
+ 2975519..2975521,2975528..2975533,2975540..2975545,
+ 2975549..2975554,2975561..2975563,2975570..2975575,
+ 2975582..2975584,2975591..2975596,2975633..2975638,
+ 2975645..2975650,2975654..2975659,2975666..2975671,
+ 2975678..2975680,2975687..2975692,2975699..2975701,
+ 2975708..2975710,2975720..2975722,2975741..2975743,
+ 2975750..2975752,2975762..2975764,2975771..2975776,
+ 2975783..2975785,2975792..2975794,2975801..2975806,
+ 2975813..2975818,2975825..2975827,2975834..2975839,
+ 2975843..2975845,2975855..2975860,2975864..2975869,
+ 2975876..2975878,2975885..2975890,2975897..2975902,
+ 2975909..2975911,2975918..2975923,2975930..2975932,
+ 2975939..2975944,2975948..2975953,2975960..2975962,
+ 2975969..2975974,2975981..2975986))
+ /locus_tag="SARI_03047"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:206779"
+ misc_feature complement(2975675..2975776)
+ /locus_tag="SARI_03047"
+ /note="putative CheW interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:206779"
+ gene 2977262..2979412
+ /locus_tag="SARI_03048"
+ CDS 2977262..2979412
+ /locus_tag="SARI_03048"
+ /inference="protein motif:HMMPfam:IPR003706"
+ /note="'COG: COG1966 Carbon starvation protein, predicted
+ membrane protein;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572031.1"
+ /db_xref="GI:161504919"
+ /db_xref="InterPro:IPR003706"
+ /translation="MDTKKIFKHIPWVILGIIGAFCLSVVALRRGEHVSALWIVVASV
+ SVYLVAYRYYSLYIAQKVMKLDPTRATPAVINNDGLNYVPTNRYVLFGHHFAAIAGAG
+ PLVGPVLAAQMGYLPGTLWLLAGVVLAGAVQDFMVLFISSRRNGASLGEMIKEEMGTV
+ PGTIALFGCFLIMIIILAVLALIVVKALAESPWGVFTVCSTVPIALFMGIYMRFIRPG
+ RVGEVSVIGIVLLVASIYFGGVIAHDPYWGPALTFKDTTITFALIGYAFVSALLPVWL
+ ILAPRDYLATFLKIGVIVGLALGIVILNPELKMPALTQYVDGTGPLWKGALFPFLFIT
+ IACGAVSGFHALISSGTTPKLLACETDARFIGYGAMLMESFVAVMALVAASIIEPGLY
+ FAMNTPPAGLGITMPNLHEMGGENAPLIMAQLKDVTAHAAATVSSWGFVISPEQILQT
+ AKDIGEPSVLNRAGGAPTLAVGIAHVFHKVLPMADMGFWYHFGILFEALFILTALDAG
+ TRSGRFMLQDLLGNFVPFLKKTDSLVAGIIGTAGCVGLWGYLLYQGVVDPLGGVKSLW
+ PLFGISNQMLAAVALVLSTVVLIKMQRTKYIWVTVIPAVWLLICTTWALGLKLFSANP
+ QMEGFFYMANLYKEKIANGANLTAEQIANMNHIVVNNYTNAGLSILFLVVVYSIIFYG
+ FTTWMTVRNSDKRTDKETPYVPVPEGGVKISSHH"
+ misc_feature 2977283..2979409
+ /locus_tag="SARI_03048"
+ /note="carbon starvation protein A; Provisional; Region:
+ PRK15015"
+ /db_xref="CDD:184976"
+ misc_feature 2977361..2978506
+ /locus_tag="SARI_03048"
+ /note="Carbon starvation protein CstA; Region: CstA;
+ pfam02554"
+ /db_xref="CDD:217102"
+ misc_feature 2978708..2979103
+ /locus_tag="SARI_03048"
+ /note="C-terminal domain on CstA (DUF4161); Region:
+ DUF4161; pfam13722"
+ /db_xref="CDD:222342"
+ gene 2979521..2979724
+ /locus_tag="SARI_03049"
+ CDS 2979521..2979724
+ /locus_tag="SARI_03049"
+ /inference="protein motif:HMMPfam:IPR007423"
+ /inference="similar to AA sequence:INSD:AAL23349.1"
+ /note="'COG: COG2879 Uncharacterized small protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572032.1"
+ /db_xref="GI:161504920"
+ /db_xref="InterPro:IPR007423"
+ /translation="MFDTLGQAKKYLGQAAKMLIGIPDYDNYVEHMKTNHPDKPYMTY
+ EAFFRERQQARYGGDGKGGMRCC"
+ misc_feature 2979521..2979721
+ /locus_tag="SARI_03049"
+ /note="Uncharacterized small protein [Function unknown];
+ Region: COG2879"
+ /db_xref="CDD:225434"
+ gene 2979735..2980691
+ /locus_tag="SARI_03050"
+ CDS 2979735..2980691
+ /locus_tag="SARI_03050"
+ /inference="protein motif:HMMPfam:IPR003495"
+ /inference="protein motif:HMMPfam:IPR011629"
+ /inference="similar to AA sequence:REFSEQ:YP_153389.1"
+ /note="'KEGG: reh:H16_A0195 7.0e-60 putative GTPase (G3E
+ family);
+ COG: COG0523 Putative GTPases (G3E family);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative GTP-binding protein YjiA"
+ /protein_id="YP_001572033.1"
+ /db_xref="GI:161504921"
+ /db_xref="InterPro:IPR003495"
+ /db_xref="InterPro:IPR011629"
+ /translation="MTPIAVTLLTGFLGAGKTTLLRHILNEQHGFKIAVIENEFGEVS
+ VDDQLIGDRATQIKTLTNGCICCTRSNELEDALLDLLDSRDRGDIDFDRLVIECTGMA
+ DPGPIIQTFFSHDMLCERYLLDGVIALVDAVHANEQMNQFTIAQSQVGYADRILLTKT
+ DVAGDSEKLRERLARINARAPVYTVVHGDIDLNKLFNTSGFMLEENVLASQPRFHFIA
+ DKQNDVSSIVVELDYPVDISDVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLFQGV
+ QRLYSADWDRPWGDEQPRSTLVFIGIQLPEAEIRSAFAGLRK"
+ misc_feature 2979735..2980688
+ /locus_tag="SARI_03050"
+ /note="putative GTP-binding protein YjiA; Provisional;
+ Region: PRK11537"
+ /db_xref="CDD:183183"
+ misc_feature 2979747..2980220
+ /locus_tag="SARI_03050"
+ /note="The function of this protein family is unkown. The
+ amino acid sequence of YjiA protein in E. coli contains
+ several conserved motifs that characterizes it as a P-loop
+ GTPase. YijA gene is among the genes significantly induced
+ in response to DNA-damage...; Region: CobW_like; cd03112"
+ /db_xref="CDD:239386"
+ misc_feature 2979765..2979788
+ /locus_tag="SARI_03050"
+ /note="P-loop, Walker A motif; other site"
+ /db_xref="CDD:239386"
+ misc_feature 2980206..2980217
+ /locus_tag="SARI_03050"
+ /note="Base recognition motif; other site"
+ /db_xref="CDD:239386"
+ misc_feature 2980404..2980685
+ /locus_tag="SARI_03050"
+ /note="Cobalamin synthesis protein cobW C-terminal domain;
+ Region: CobW_C; pfam07683"
+ /db_xref="CDD:219512"
+ gene 2980730..2981545
+ /locus_tag="SARI_03051"
+ CDS 2980730..2981545
+ /locus_tag="SARI_03051"
+ /inference="protein motif:FPrintScan:IPR000005"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR000005"
+ /inference="protein motif:HMMPfam:IPR003313"
+ /inference="protein motif:HMMSmart:IPR000005"
+ /inference="protein motif:ScanRegExp:IPR000005"
+ /inference="protein motif:superfamily:IPR003313"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:REFSEQ:YP_219368.1"
+ /note="'KEGG: tdn:Tmden_1946 3.0e-08 transcriptional
+ regulator, AraC family K00567;
+ COG: COG2207 AraC-type DNA-binding domain-containing
+ proteins;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572034.1"
+ /db_xref="GI:161504922"
+ /db_xref="InterPro:IPR000005"
+ /db_xref="InterPro:IPR003313"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /translation="MPLIRDIHQRFWRLPQLPWLELRTTSESRQAYKRHSHPQLSLGA
+ IIAGETRCISNGQEYLLRPGELILIPPQSPHSCNPRNGRPRSYHILYLDADWCLAQLH
+ HLPADSRLHTAQPQLQDPQLFQLYQQIITSIIQQQTTELPALIIHMLHALPLQSTDAK
+ PPRATSRQLFSRLSSNLQEPPTLDTLAQEFALRKETLIRTFKQDTGLTPASFINMARI
+ EYARHRLRAGDGIADVAYQTGFADQSHFHKTFVSYTAATPRQYARNRSIFDNK"
+ misc_feature 2980814..>2981017
+ /locus_tag="SARI_03051"
+ /note="AraC-like ligand binding domain; Region:
+ AraC_binding; pfam02311"
+ /db_xref="CDD:145456"
+ misc_feature 2981174..2981518
+ /locus_tag="SARI_03051"
+ /note="AraC-type DNA-binding domain-containing proteins
+ [Transcription]; Region: AraC; COG2207"
+ /db_xref="CDD:225117"
+ misc_feature <2981420..2981518
+ /locus_tag="SARI_03051"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ gene 2981593..2982237
+ /locus_tag="SARI_03052"
+ CDS 2981593..2982237
+ /locus_tag="SARI_03052"
+ /inference="protein motif:HMMPfam:IPR001123"
+ /inference="similar to AA sequence:REFSEQ:YP_219367.1"
+ /note="'KEGG: rme:Rmet_3499 0.0052 ATP synthase F0, C
+ subunit K02110;
+ COG: COG1280 Putative threonine efflux protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572035.1"
+ /db_xref="GI:161504923"
+ /db_xref="InterPro:IPR001123"
+ /translation="MEQVTTLFPTAFPALALAHFMALLSPGPDFFLLVGYAIRYRLRG
+ SVGLCLGIAAGNGLYILLVVIGSGLLRQTPLLLTIIELFGAAYLLWVGRQLLKSRAGP
+ LGWRRHAASACPSLAKQLLLGPGSSLLNPKNALFYLALMTALLGPNVTVTQQAICGIW
+ MTSVVLLWDLLLITLIALPQIQRRLGNLVWKIERAAGGILIAFGSWIVWQFITS"
+ misc_feature 2981647..2982219
+ /locus_tag="SARI_03052"
+ /note="Putative threonine efflux protein [Amino acid
+ transport and metabolism]; Region: RhtB; COG1280"
+ /db_xref="CDD:224199"
+ gene 2982648..2983571
+ /locus_tag="SARI_03053"
+ CDS 2982648..2983571
+ /locus_tag="SARI_03053"
+ /inference="similar to AA sequence:REFSEQ:YP_107575.1"
+ /note="'COG: COG3586 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572036.1"
+ /db_xref="GI:161504924"
+ /translation="MSDIQLFRYGAGKVQELPGKAAVIEKDLQTLIESHMETFLGVRF
+ LDTEYRTGKTHRGRIDSLGLDENNCPVIIEYKRHSNENVINQGLFYLDWLLDHKAEFQ
+ LQVMEKISKTAAKAIDWSGTRLICIAADFNKYDEHAVQQINRNINLIRYKLFADDLLM
+ LELVNAVVENSPQHITVDGPTSGNGKRHTRTQREQLSSASPALLSLYEQLKSYVLSLS
+ DEVQFKELKLYDAFRLIRNFLCVAVYPVTDPHLRLWLKINPQHIQLEEGFSRDVTNIG
+ HWGTGDVELIVRNEHDLDKAKLLIEKAWQEN"
+ misc_feature <2982720..>2982878
+ /locus_tag="SARI_03053"
+ /note="Protein of unknown function DUF91; Region: DUF91;
+ cl00709"
+ /db_xref="CDD:242040"
+ misc_feature 2983266..2983562
+ /locus_tag="SARI_03053"
+ /note="Uncharacterized conserved protein [Function
+ unknown]; Region: COG3586"
+ /db_xref="CDD:226114"
+ gene complement(2983648..2983812)
+ /locus_tag="SARI_03054"
+ CDS complement(2983648..2983812)
+ /locus_tag="SARI_03054"
+ /inference="protein motif:HMMPfam:IPR009506"
+ /inference="similar to AA sequence:INSD:AAL23339.1"
+ /note="'COG: COG5457 Uncharacterized conserved small
+ protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572037.1"
+ /db_xref="GI:161504925"
+ /db_xref="InterPro:IPR009506"
+ /translation="MEFYENRPRQPFIGFVQLRRALKRWWLRKRACQALRRLSDEQLR
+ DIGLERKDVE"
+ misc_feature complement(2983651..2983812)
+ /locus_tag="SARI_03054"
+ /note="Uncharacterized conserved small protein [Function
+ unknown]; Region: COG5457"
+ /db_xref="CDD:227744"
+ gene complement(2984018..2985388)
+ /locus_tag="SARI_03055"
+ CDS complement(2984018..2985388)
+ /locus_tag="SARI_03055"
+ /inference="protein motif:HMMPfam:IPR002086"
+ /inference="protein motif:HMMPIR:IPR012303"
+ /inference="protein motif:ScanRegExp:IPR002086"
+ /inference="similar to AA sequence:REFSEQ:NP_463378.1"
+ /note="'KEGG: stm:STM4519 3.0e-233 putative NAD-dependent
+ aldehyde dehydrogenase K00135;
+ COG: COG1012 NAD-dependent aldehyde dehydrogenases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572038.1"
+ /db_xref="GI:161504926"
+ /db_xref="InterPro:IPR002086"
+ /db_xref="InterPro:IPR012303"
+ /translation="MAYQTVNPANNQLIKEYPPHTDADIEAALQKADALYRSDWSKGD
+ IDQRLPVLHKLADLIDSRVEELAKIASQEMGKLIEQSRGEVKLCAQIARYYADNAKQF
+ LAPVPYKTVFGDAWVEHHPIGVIMAVEPWNFPYYQLMRVLAPNLAAGNPVLAKHASIV
+ PHCAETFAHLVREAGAPDGAWTNLFISSDQVANIISDPRVQGAALTGSEKAGSAVAAQ
+ AAKHIKKATLELGGNDVFVVLDDADIEKAVKIGVQARLTNAGQVCTAAKRFILHEKIA
+ DRFLSQFTEAFSKVKMGDQMDAATELGPLSSKDALETLTRQVNEAVKNGATLHFGGKP
+ LESKDNFFAPTILTQITRDNPAYFEEFFGPVAQIYVVKDDDEAIKLANDSHYGLGGAV
+ FSQDIERAKRMASRIETGMVYINWLTDTAAELPFGGVKRSGFGRELSDLGIKEFVNQK
+ LVVVRR"
+ misc_feature complement(2984021..2985388)
+ /locus_tag="SARI_03055"
+ /note="NAD-dependent aldehyde dehydrogenases [Energy
+ production and conversion]; Region: PutA; COG1012"
+ /db_xref="CDD:223944"
+ misc_feature complement(2984027..2985316)
+ /locus_tag="SARI_03055"
+ /note="Mycobacterium tuberculosis succinate-semialdehyde
+ dehydrogenase 1-like; Region: ALDH_SSADH1_GabD1; cd07100"
+ /db_xref="CDD:143418"
+ misc_feature complement(order(2984111..2984113,2984225..2984227,
+ 2984303..2984305,2984309..2984311,2984600..2984602,
+ 2984696..2984704,2984744..2984749,2984756..2984758,
+ 2984765..2984776,2984915..2984920,2984924..2984926,
+ 2984969..2984971,2984993..2985007))
+ /locus_tag="SARI_03055"
+ /note="NAD(P) binding site [chemical binding]; other site"
+ /db_xref="CDD:143418"
+ misc_feature complement(order(2984600..2984602,2984609..2984611,
+ 2984702..2984704,2984993..2984995))
+ /locus_tag="SARI_03055"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:143418"
+ gene complement(2985572..2986520)
+ /locus_tag="SARI_03056"
+ /note="Pseudogene compared to gi|16767762|ref|NP_463377.1|
+ putative inner membrane protein [Salmonella typhimurium
+ LT2]"
+ gene 2987000..2988241
+ /locus_tag="SARI_03057"
+ CDS 2987000..2988241
+ /locus_tag="SARI_03057"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="protein motif:ScanRegExp:IPR005829"
+ /inference="similar to AA sequence:REFSEQ:NP_458943.1"
+ /note="'KEGG: shn:Shewana3_1692 0.00070 Xaa-His
+ dipeptidase K01270;
+ COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572039.1"
+ /db_xref="GI:161504927"
+ /db_xref="InterPro:IPR005829"
+ /db_xref="InterPro:IPR011701"
+ /translation="MQRILQFFSQRATTLFFPMALILYDFAAYLTTDLIQPGIINVVR
+ DFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLIAGALIFTLACAATLLTT
+ SMTQFLVARFVQGTSICFIATVGYVTVQEAFGQTKAIKLMAIITSIVLVAPVIGPLSG
+ AALMHFVHWKVLFGIIAVMGLLALCGLLLAMPETVQRGAVPFSAVSVLRDFRNVFRNP
+ IFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMSTSQFAWAQVPVFGAVIVANMIVVR
+ LVKDPTRPRFIWRAVPIQLSGLATLLLGNLLLPHVWLWSVLGTSLYAFGIGMIFPTLF
+ RFTLFSNNLPKGTVSASLNMVILTVMAVSVEVGRWLWFHGGRLPFHLLAAVAGVIVVF
+ TLATLLQRVRQHEAAELAAEK"
+ misc_feature 2987000..2988238
+ /locus_tag="SARI_03057"
+ /note="multidrug efflux system protein MdtM; Provisional;
+ Region: PRK15403"
+ /db_xref="CDD:237958"
+ misc_feature 2987057..2988181
+ /locus_tag="SARI_03057"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature order(2987093..2987095,2987102..2987110,2987114..2987119,
+ 2987168..2987170,2987177..2987182,2987189..2987191,
+ 2987201..2987206,2987210..2987215,2987351..2987356,
+ 2987363..2987368,2987375..2987380,2987387..2987389,
+ 2987423..2987428,2987435..2987440,2987456..2987458,
+ 2987690..2987692,2987699..2987704,2987711..2987716,
+ 2987723..2987725,2987765..2987767,2987777..2987779,
+ 2987789..2987791,2987798..2987800,2987810..2987812,
+ 2987972..2987974,2987981..2987986,2987993..2987995,
+ 2988005..2988010,2988017..2988019,2988041..2988046,
+ 2988053..2988058,2988065..2988070,2988077..2988079)
+ /locus_tag="SARI_03057"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene 2988328..2989599
+ /locus_tag="SARI_03058"
+ CDS 2988328..2989599
+ /locus_tag="SARI_03058"
+ /inference="protein motif:HMMPfam:IPR007383"
+ /inference="similar to AA sequence:INSD:AAL23334.1"
+ /note="'COG: COG2733 Predicted membrane protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572040.1"
+ /db_xref="GI:161504928"
+ /db_xref="InterPro:IPR007383"
+ /translation="MNKIAELKRAKRLALSLLLIAAATFVTTLFLPPNFWVLGVKAIA
+ EAAMVGALADWFAVVALFRRIPIPFISRHTAIIPRNKDRIGENLGQFVQEKFLDTQSL
+ IALIRRHEPALLIGNWFSQPDNASRVGQHLLQIMSGFLELTDDARIQRLLKRAVHKAI
+ DKVDLSGTSALMLESMTKNDRHQVLLDTLIAQLIALLQRDSSRTFIARQIVRWLETEH
+ PLKAKILPTEWLGEHSAELVSDAVNSLLDDISHDRAHQIRYAFDRATYKLIDKLKHDP
+ EMSARAEHIKSYLKEDEAFNRYLGEIWADLRRWLKTDINAEDSKVKQRIAHAGQWFGE
+ TLIADDALRASLNGHLEQAAHRVAPEFAVFLTRHISDTVKGWDARDMSQQIELNIGKD
+ LQFIRVNGTLVGGAIGLGLYLLSQIPALVSI"
+ misc_feature 2988397..2989584
+ /locus_tag="SARI_03058"
+ /note="Predicted membrane protein [Function unknown];
+ Region: COG2733"
+ /db_xref="CDD:225347"
+ gene 2989806..2990990
+ /locus_tag="SARI_03059"
+ CDS 2989806..2990990
+ /locus_tag="SARI_03059"
+ /inference="protein motif:HMMPfam:IPR010645"
+ /inference="similar to AA sequence:REFSEQ:YP_219357.1"
+ /note="'KEGG: eci:UTI89_C5041 9.3e-145 yjiJ; hypothetical
+ protein YjiJ K00403;
+ COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572041.1"
+ /db_xref="GI:161504929"
+ /db_xref="InterPro:IPR010645"
+ /translation="MFQGQSASPRHPVFTALFGMMVLMLGMGIGRFLYTPMLPVMLAE
+ KQLTFNHLSWIASANYAGYLAGSLLFSFGLFHLPSRLRPMLLASAAATGMLILTMAIF
+ TQPAAVMLVRFLAGVASAGMMIFGSMIVLHHTRHPFVIAALFSGVGAGIVLGNEYVTG
+ GLRYALSAHSLWLGAGALAGILLSIVAMLIPPRAHALPPAPLARIENQPMLWWQLALL
+ YGLAGFGYIIVATYLPLMAKSAGSPLLTAHLWSLVGLAIIPGCFGWLWSAKRWGVLPC
+ LTANLLIQSACVLLSLASGSLLLLILSSIGFGATFMGTTSLVMPLARQLSAPGNINLL
+ GLVTLTYGIGQILGPLAASLSGNGASAIINATLCGAAALFFAALISAAQQVKQKRIVI
+ RE"
+ misc_feature 2989896..2990135
+ /locus_tag="SARI_03059"
+ /note="Protein of unknown function (DUF1228); Region:
+ DUF1228; pfam06779"
+ /db_xref="CDD:219173"
+ gene 2991247..2992278
+ /locus_tag="SARI_03060"
+ CDS 2991247..2992278
+ /locus_tag="SARI_03060"
+ /inference="protein motif:HMMPfam:IPR001584"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:REFSEQ:ZP_00923070.1"
+ /note="'KEGG: nha:Nham_4600 1.1e-09 feruloyl esterase;
+ COG: COG3335 Transposase and inactivated derivatives;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572042.1"
+ /db_xref="GI:161504930"
+ /db_xref="InterPro:IPR001584"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012337"
+ /translation="MPIIAPIPRDERRLMQKAIHKTHDKNYARRLTAMLMLHRGDRVS
+ DVARTLCCARSSVGRWINWFTLSGVAGLKSLPAGRTRRWPFEHICTLLRELVKHAPGD
+ FGYQRSRWSTELLAIKINEITGCQLHAGTVRRWLPSAGLVWRRAAPTLRIRDPHKDEK
+ MAAIHKALDECSAEHPVFYEDEVDIHLNPKIGADWQLRGQQKRVVTPGQNEKYYLAGA
+ LHSGTGKVSYVGGNSKSSALFISLLKRLKATYRRAKTITLIVDNYIIHKSRETQRWLK
+ ENPKFRVIYQPVYSPWVNHVERLWQALHDTITRNHQCRSMWQLLKKVRHFMETVSPFP
+ GGKHGLAKV"
+ misc_feature 2991316..2991465
+ /locus_tag="SARI_03060"
+ /note="Homeodomain-like domain; Region: HTH_23; pfam13384"
+ /db_xref="CDD:222091"
+ misc_feature 2991334..2991654
+ /locus_tag="SARI_03060"
+ /note="Winged helix-turn helix; Region: HTH_29; pfam13551"
+ /db_xref="CDD:222216"
+ misc_feature 2991412..2991654
+ /locus_tag="SARI_03060"
+ /note="Homeodomain-like domain; Region: HTH_32; pfam13565"
+ /db_xref="CDD:222226"
+ misc_feature 2991562..2991750
+ /locus_tag="SARI_03060"
+ /note="Winged helix-turn helix; Region: HTH_33; pfam13592"
+ /db_xref="CDD:222248"
+ misc_feature 2991739..2992128
+ /locus_tag="SARI_03060"
+ /note="Transposase and inactivated derivatives [DNA
+ replication, recombination, and repair]; Region: COG3335"
+ /db_xref="CDD:225872"
+ misc_feature 2991772..2992179
+ /locus_tag="SARI_03060"
+ /note="DDE superfamily endonuclease; Region: DDE_3;
+ pfam13358"
+ /db_xref="CDD:222070"
+ gene 2992840..2993511
+ /locus_tag="SARI_03061"
+ CDS 2992840..2993511
+ /locus_tag="SARI_03061"
+ /inference="protein motif:HMMPfam:IPR011642"
+ /inference="similar to AA sequence:INSD:AAX68275.1"
+ /note="'COG: COG3314 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572043.1"
+ /db_xref="GI:161504931"
+ /db_xref="InterPro:IPR011642"
+ /translation="MAQQVDEAAMPLDTEKAGVKGYLAFFLTIIFFSGVFSGSDGWWR
+ VFDFTVLNGSFGHVTGTQTFRGAGGAGAKDGFLFALELAPSVILSLGIIAITDGMGGL
+ RAAQQLMTPILKPLLGIPGICSLALIANLQNTDAAAGMTKELAQEGEITERDKVIFAA
+ WQTSGSAIITNYFSSGVAVFAFLGTSVIIPLVVILLFKFIGANLLRIWINIEERRHPA
+ QGAQA"
+ misc_feature <2992840..>2993505
+ /locus_tag="SARI_03061"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG3314"
+ /db_xref="CDD:225851"
+ misc_feature 2993074..2993349
+ /locus_tag="SARI_03061"
+ /note="Nucleoside recognition; Region: Gate; pfam07670"
+ /db_xref="CDD:219507"
+ gene 2993508..2993969
+ /locus_tag="SARI_03062"
+ CDS 2993508..2993969
+ /locus_tag="SARI_03062"
+ /inference="protein motif:HMMPfam:IPR011642"
+ /inference="protein motif:HMMPIR:IPR011377"
+ /inference="similar to AA sequence:INSD:AAV80060.1"
+ /note="'COG: COG0700 Uncharacterized membrane protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572044.1"
+ /db_xref="GI:161504932"
+ /db_xref="InterPro:IPR011377"
+ /db_xref="InterPro:IPR011642"
+ /translation="MTTQVRKNVMDMFIDGARRGFTIATTNLLPNVVMAFVIIQALKI
+ TGLLDWVGHICQPVMALWGLPGEAATVLLASLMSMGGAVGVAASLATAGALSGHDVTV
+ LLPAIYLMGNPVQNVGRCLGTAEVNAKYYPHIIAVCAINALLSIWVMQLIV"
+ misc_feature 2993514..2993966
+ /locus_tag="SARI_03062"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10519"
+ /db_xref="CDD:182513"
+ gene 2993984..2995156
+ /locus_tag="SARI_03063"
+ CDS 2993984..2995156
+ /locus_tag="SARI_03063"
+ /inference="protein motif:HMMPfam:IPR013108"
+ /inference="protein motif:HMMTigr:IPR010229"
+ /inference="protein motif:superfamily:IPR011059"
+ /inference="similar to AA sequence:REFSEQ:YP_153371.1"
+ /note="'KEGG: spt:SPA4332 1.1e-198 iadA; probable
+ isoaspartyl dipeptidase K01305;
+ COG: NOG06797 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="isoaspartyl dipeptidase"
+ /protein_id="YP_001572045.1"
+ /db_xref="GI:161504933"
+ /db_xref="InterPro:IPR010229"
+ /db_xref="InterPro:IPR011059"
+ /db_xref="InterPro:IPR013108"
+ /translation="MPDLSAAEFTLLQGARLFAPEERGICDVLLANGKIIAVDADIPG
+ DIVPNCTVINLSGRMLCPGFIDQHVHLIGGGGEAGPTTRTPEVSLSRLTEAGITTVIG
+ LLGTDSVSRHPASLLAKTRALNEEGITAWMLTGAYHVPSPTITGSVEKDVALIDRVIG
+ VKCAVSDHRSAAPAGNQLASMAAESRVGGLLGGKPGVSVFHMGSSKKGLQPLYDILEN
+ SDVPIGKLLPTHVNRSESLFEQALAFALKGGVIDITTSIPDPVAPAEGIVRAVKAGVP
+ LSRLTLSSDGNGSQPLFDAAGNLTGIGVAGFESLLETLQMLVNRYGFSLTDALRPLTT
+ SVAAFLSLDGKGEIRPGNDADLLVFSADLRIEQVYARGKRMVNEGKACVKGTFEPA"
+ misc_feature 2994008..2995147
+ /locus_tag="SARI_03063"
+ /note="isoaspartyl dipeptidase; Provisional; Region:
+ PRK10657"
+ /db_xref="CDD:182623"
+ misc_feature 2994008..2995147
+ /locus_tag="SARI_03063"
+ /note="Superfamily of metallo-dependent hydrolases (also
+ called amidohydrolase superfamily) is a large group of
+ proteins that show conservation in their 3-dimensional
+ fold (TIM barrel) and in details of their active site. The
+ vast majority of the members have a...; Region:
+ metallo-dependent_hydrolases; cl00281"
+ /db_xref="CDD:241750"
+ misc_feature order(2994185..2994187,2994191..2994193,2994584..2994586,
+ 2994671..2994673,2994836..2994838)
+ /locus_tag="SARI_03063"
+ /note="active site"
+ /db_xref="CDD:238617"
+ gene 2995275..2996183
+ /locus_tag="SARI_03064"
+ CDS 2995275..2996183
+ /locus_tag="SARI_03064"
+ /inference="protein motif:FPrintScan:IPR000847"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="protein motif:HMMPfam:IPR005119"
+ /inference="similar to AA sequence:INSD:AAO71999.1"
+ /note="'KEGG: shn:Shewana3_3435 7.8e-13 transcriptional
+ regulator, LysR family K06022;
+ COG: COG0583 Transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative DNA-binding transcriptional regulator"
+ /protein_id="YP_001572046.1"
+ /db_xref="GI:161504934"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR005119"
+ /db_xref="InterPro:IPR011991"
+ /translation="MDVTGAGLHNIETKWLYDFLTLEKCRNFSQAAIIRNVSQPAFSR
+ RIRALEHAVGVELFNRQVSPLQLSEQGKIFHSQVRHLLQQLESNLTELRGGSDYTLHK
+ IKIAAAHSLSLGLLPTIVKQMPTQFTYSVEAIDVDQAVDMLREGQSDFIFSYHDENLQ
+ QTPFDNIRLFESRLFPVCASSEQGEPRYTLEQPHFPLLNYSQNSYMGRLINRTLTRHA
+ ELSFSTFFVSSMSELLKQVVMDGCGIAWLPEYAIRQEITDGRLIVLDADELVIPIQAY
+ AYRMNTRMSQVAETFWRDLRGLQAAL"
+ misc_feature 2995275..2996180
+ /locus_tag="SARI_03064"
+ /note="cell density-dependent motility repressor;
+ Provisional; Region: PRK10082"
+ /db_xref="CDD:182228"
+ misc_feature 2995314..2995490
+ /locus_tag="SARI_03064"
+ /note="Bacterial regulatory helix-turn-helix protein, lysR
+ family; Region: HTH_1; pfam00126"
+ /db_xref="CDD:215735"
+ misc_feature 2995578..2996153
+ /locus_tag="SARI_03064"
+ /note="The substrate binding domain of LysR-type
+ transcriptional regulators (LTTRs), a member of the type 2
+ periplasmic binding fold protein superfamily; Region:
+ PBP2_LTTR_substrate; cd05466"
+ /db_xref="CDD:176102"
+ misc_feature order(2995623..2995628,2995632..2995637,2995644..2995646,
+ 2995656..2995673,2995947..2995964,2995980..2995985,
+ 2995989..2995994)
+ /locus_tag="SARI_03064"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:176102"
+ gene complement(2996188..2996922)
+ /locus_tag="SARI_03065"
+ CDS complement(2996188..2996922)
+ /locus_tag="SARI_03065"
+ /inference="protein motif:HMMPfam:IPR001920"
+ /inference="protein motif:HMMTigr:IPR004380"
+ /inference="protein motif:ScanRegExp:IPR001920"
+ /inference="protein motif:superfamily:IPR001920"
+ /inference="similar to AA sequence:INSD:AAV80057.1"
+ /note="'KEGG: eca:ECA1500 4.5e-49 probable aspartate
+ racemase K01779;
+ COG: COG1794 Aspartate racemase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572047.1"
+ /db_xref="GI:161504935"
+ /db_xref="InterPro:IPR001920"
+ /db_xref="InterPro:IPR004380"
+ /translation="MKHTIGILGGMGPAATADMLEKFVELRHASCDQQHIPLIVSSIP
+ DIPDRTAYLLSGGPSPYRYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAKARMI
+ SILDATLEDIPPSARHVGLLATNATLATGLYQKKAQAHGLTLIQPEDAGQALVMQAIY
+ TLKRGDKPAAQALLLPQIDSLVARGVQAIIMGCTEIPLIVAGYEDAVACPMIDSTASL
+ VRAAIRWYESWPDTRATVAGEQRLSA"
+ misc_feature complement(2996251..2996919)
+ /locus_tag="SARI_03065"
+ /note="Asp/Glu/Hydantoin racemase; Region: Asp_Glu_race;
+ cl00518"
+ /db_xref="CDD:241919"
+ misc_feature complement(2996251..2996913)
+ /locus_tag="SARI_03065"
+ /note="aspartate racemase; Region: asp_race; TIGR00035"
+ /db_xref="CDD:213495"
+ gene complement(2997161..2997607)
+ /locus_tag="SARI_03066"
+ CDS complement(2997161..2997607)
+ /locus_tag="SARI_03066"
+ /inference="protein motif:HMMPfam:IPR008514"
+ /inference="similar to AA sequence:REFSEQ:NP_463368.2"
+ /note="'COG: COG3157 Hemolysin-coregulated protein
+ (uncharacterized);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572048.1"
+ /db_xref="GI:161504936"
+ /db_xref="InterPro:IPR008514"
+ /translation="MDAIYLKLDGIEGESLTKGFEKQIRLIAYNHSQAKWESGEARGT
+ YIGGLTLTKPIDLATPGLYEHYRNGKTVKEGVLTLCRNDKGAMQPFIIYTLTNVRILR
+ MSNHGHTEDSATETVDLVYSHIRWDIPALAPKSKTRLPLHRQELWR"
+ misc_feature complement(2997167..2997607)
+ /locus_tag="SARI_03066"
+ /note="Protein of unknown function (DUF796); Region:
+ DUF796; cl01226"
+ /db_xref="CDD:242377"
+ gene complement(2997994..2998128)
+ /locus_tag="SARI_03067"
+ CDS complement(2997994..2998128)
+ /locus_tag="SARI_03067"
+ /inference="similar to AA sequence:REFSEQ:NP_945172.1"
+ /note="'COG: NOG34393 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572049.1"
+ /db_xref="GI:161504937"
+ /translation="MPPNYVTLKRAFLMQIIYYCDNSARDKSIKYIHMLNMFSWNGCY
+ "
+ gene 2998513..2998692
+ /locus_tag="SARI_03068"
+ CDS 2998513..2998692
+ /locus_tag="SARI_03068"
+ /inference="similar to AA sequence:INSD:CAD03352.1"
+ /note="'KEGG: spt:SPA4327 1.7e-19 trpS-like protein
+ K01867;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572050.1"
+ /db_xref="GI:161504938"
+ /translation="MKAYYQQGGSGDRVCKNDLETCLQELIAPIHERRAKFIDNKGEL
+ MELLKKAAGGLHEVT"
+ misc_feature <2998513..2998668
+ /locus_tag="SARI_03068"
+ /note="nucleotidyl transferase superfamily; Region:
+ nt_trans; cl00015"
+ /db_xref="CDD:241550"
+ gene complement(2998750..2999523)
+ /locus_tag="SARI_03069"
+ CDS complement(2998750..2999523)
+ /locus_tag="SARI_03069"
+ /inference="protein motif:Gene3D:IPR000524"
+ /inference="protein motif:HMMPfam:IPR000524"
+ /inference="protein motif:HMMPfam:IPR011711"
+ /inference="protein motif:HMMSmart:IPR000524"
+ /inference="similar to AA sequence:REFSEQ:NP_463366.1"
+ /note="regulates the expression of uxuBA"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional repressor UxuR"
+ /protein_id="YP_001572051.1"
+ /db_xref="GI:161504939"
+ /db_xref="InterPro:IPR000524"
+ /db_xref="InterPro:IPR011711"
+ /translation="MKSNTSQQRPYQEVGAMIRDLIVQTPYRPGERLPPERELAERLN
+ VTRTVVREALIMLEIKGLVEVRRGAGIYVLDSVGDDGIGEADVNHCNDAGPFELLQAR
+ QLLESNIAEFAALQATREDIIKMRQALQLEERELASSAPGGSENGDMQFHLAIAEATH
+ NSMLVELFRQSWQWRENNPMWLQLHSHLGDTLYRKEWLVDHKQILAALIKKDARAAKL
+ AMWQHLENVKQRLLEFSNVDDIYFDGYLFESWPLDNVDA"
+ misc_feature complement(2998753..2999523)
+ /locus_tag="SARI_03069"
+ /note="DNA-binding transcriptional repressor UxuR;
+ Provisional; Region: PRK10225"
+ /db_xref="CDD:182318"
+ misc_feature complement(2999305..2999493)
+ /locus_tag="SARI_03069"
+ /note="Winged helix-turn-helix (WHTH) DNA-binding domain
+ of the GntR family of transcriptional regulators; Region:
+ WHTH_GntR; cd07377"
+ /db_xref="CDD:153418"
+ misc_feature complement(order(2999311..2999322,2999326..2999331,
+ 2999359..2999361,2999368..2999373,2999377..2999391,
+ 2999413..2999418,2999422..2999424,2999491..2999493))
+ /locus_tag="SARI_03069"
+ /note="DNA-binding site [nucleotide binding]; DNA binding
+ site"
+ /db_xref="CDD:153418"
+ misc_feature complement(2998846..2999235)
+ /locus_tag="SARI_03069"
+ /note="This entry represents the C-terminal ligand binding
+ domain of many members of the GntR family; Region: FCD;
+ smart00895"
+ /db_xref="CDD:214892"
+ gene complement(2999708..3000013)
+ /locus_tag="SARI_03070"
+ CDS complement(2999708..3000013)
+ /locus_tag="SARI_03070"
+ /note="'Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572052.1"
+ /db_xref="GI:161504940"
+ /translation="MACALDMSVNPINFMQNNRCPAIADRQTGGVAGSGNTWDENTVF
+ FIIMRSGYKGDRLDSRRSRYVRCFVPVNVQAHLVVFFVVDKLFIGKPIMIFIFRRRG"
+ gene 3000020..3000538
+ /locus_tag="SARI_03071"
+ CDS 3000020..3000538
+ /locus_tag="SARI_03071"
+ /inference="protein motif:HMMPfam:IPR000073"
+ /inference="protein motif:ScanRegExp:IPR008262"
+ /inference="similar to AA sequence:INSD:AAL23324.1"
+ /note="'KEGG: rfr:Rfer_3810 2.9e-08
+ carboxymethylenebutenolidase K01061;
+ COG: COG0412 Dienelactone hydrolase and related enzymes;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572053.1"
+ /db_xref="GI:161504941"
+ /db_xref="InterPro:IPR000073"
+ /db_xref="InterPro:IPR008262"
+ /translation="MTRGFDVYTPSLFPHHTPFRYEQQEEAYHHFSENIGFDSAVVTT
+ LLNDLRVQYETLIVVGYSVGATLAWLSAASGLCDGVICYYGSRIRQYTHLAPRCPTLV
+ IIARYEPAFDPLAMRQALEKLPRVRCKMYDARHGFCDADSATFDAALSHQVMDLVTTF
+ IRDLISANTSPD"
+ misc_feature <3000026..3000511
+ /locus_tag="SARI_03071"
+ /note="Dienelactone hydrolase and related enzymes
+ [Secondary metabolites biosynthesis, transport, and
+ catabolism]; Region: COG0412"
+ /db_xref="CDD:223489"
+ gene complement(3000555..3001016)
+ /locus_tag="SARI_03072"
+ CDS complement(3000555..3001016)
+ /locus_tag="SARI_03072"
+ /inference="protein motif:HMMPfam:IPR005180"
+ /inference="similar to AA sequence:INSD:AAL23323.1"
+ /note="'COG: COG3439 Uncharacterized conserved protein;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572054.1"
+ /db_xref="GI:161504942"
+ /db_xref="InterPro:IPR005180"
+ /translation="MSTILKPFLLAITLMLTLIRPGFATEDGAIAMVKTYSAYDYPQT
+ RLRLMQAVADNGLVLFGEFDHARAAQNVNLKMPPTTVLVFGNPKGGTPLMLAHPELAL
+ DLPFRVLIRQQADGRTLVSYHPAETLQRYGLDAAAIQALKKQEKLVEKSIH"
+ misc_feature complement(3000558..3000950)
+ /locus_tag="SARI_03072"
+ /note="Uncharacterized conserved protein [Function
+ unknown]; Region: COG3439"
+ /db_xref="CDD:225972"
+ gene complement(3001370..3002278)
+ /locus_tag="SARI_03073"
+ CDS complement(3001370..3002278)
+ /locus_tag="SARI_03073"
+ /inference="similar to AA sequence:INSD:AAL23322.1"
+ /note="'COG: NOG08605 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572055.1"
+ /db_xref="GI:161504943"
+ /translation="MHTFRPYSLRHSDLLYEDIPLEIREQIILLIINTLGSCSSFYDM
+ TLYCYHNSHSDEVYRRICKTLRKEYGLFTLYEHSTSYLDEISNLLLKTDDKRKHIDTV
+ ELAFKYIDTYLRAYEITLGLEPDKAISDLNNIFHEHNLKYRFENNRIVRLRRIKRLKN
+ IRYYLYSPGEYGFVEYDLMEAYNRLMLNDFARVVSECHAVFRRVLIRIHEKKGILYHE
+ KDNLNTLMASLMARDVISAEYERKFQFLSNVLESEIFPLIAQEKSHHHYVMMLRISEE
+ LACSIYYLTERSIFFLTQQAEDDVVP"
+ gene 3002446..3002631
+ /locus_tag="SARI_03074"
+ CDS 3002446..3002631
+ /locus_tag="SARI_03074"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572056.1"
+ /db_xref="GI:161504944"
+ /translation="MHIYDDEAGVFLSDKTLDAINELRTILLFYPLSYLLNRKIILTD
+ KINKPFNDNNIRSVAMG"
+ gene complement(3002654..3003163)
+ /locus_tag="SARI_03075"
+ CDS complement(3002654..3003163)
+ /locus_tag="SARI_03075"
+ /inference="protein motif:HMMPfam:IPR001584"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:INSD:ABF02610.1"
+ /note="'COG: COG2801 Transposase and inactivated
+ derivatives;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572057.1"
+ /db_xref="GI:161504945"
+ /db_xref="InterPro:IPR001584"
+ /db_xref="InterPro:IPR012337"
+ /translation="MTKDVVLNALLMAVWRGNPQRKLLVHSDQGSQYTSHEWQSFLKS
+ HGLEGSMSRRGNCHDNAVAESFFQLLKRERIKKKIYGTREEARSDIFDYIEMFYNSKR
+ RHGSSNQMSPTEYENQYYQRLGSVWIIRGDSSQLKQKSVVEVYIYSRHPVSALGMGKS
+ SDEVEVYIE"
+ misc_feature complement(3002945..>3003163)
+ /locus_tag="SARI_03075"
+ /note="Integrase core domain; Region: rve; pfam00665"
+ /db_xref="CDD:216050"
+ misc_feature complement(3002807..3002974)
+ /locus_tag="SARI_03075"
+ /note="Integrase core domain; Region: rve_2; pfam13333"
+ /db_xref="CDD:205513"
+ gene complement(3003276..3003644)
+ /locus_tag="SARI_03076"
+ CDS complement(3003276..3003644)
+ /locus_tag="SARI_03076"
+ /inference="similar to AA sequence:INSD:AAG53988.1"
+ /note="'COG: COG2801 Transposase and inactivated
+ derivatives;
+ Psort location: mitochondrial, score: 23;
+ ORF located using Blastx'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572058.1"
+ /db_xref="GI:161504946"
+ /translation="MRYAFIRDNSSCWPVRLLCRVLNVHPSGFYAWLQQPHSQRHQVD
+ RRLTGQIKQFWLESGCVYGYRKIHLDLRDSGQQCGVNRVWRLRDKGSGRVPEPAGTQR
+ RGLYRIAQQAPATVQSGCAE"
+ misc_feature complement(<3003387..3003521)
+ /locus_tag="SARI_03076"
+ /note="HTH-like domain; Region: HTH_21; pfam13276"
+ /db_xref="CDD:222019"
+ gene complement(3003694..3004581)
+ /locus_tag="SARI_03077"
+ CDS complement(3003694..3004581)
+ /locus_tag="SARI_03077"
+ /inference="protein motif:HMMPfam:IPR003346"
+ /inference="similar to AA sequence:INSD:ABL64095.1"
+ /note="'COG: COG3547 Transposase and inactivated
+ derivatives;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572059.1"
+ /db_xref="GI:161504947"
+ /db_xref="InterPro:IPR003346"
+ /translation="MQKALMQMNVQLHHAVSDITGVTGLSIVRAIVSGERDPSVLIQY
+ RDVRCKKTPEVLQQALTGNWQPEHLFAPEQSVAFFDFYQEKIRECDDQIETSLLQLST
+ GTEEPEGVLPSARHRTKQPNQLSFDVRPLLWKITGADLTQIHGFGPYLALKFVAECGT
+ DMNRWPDASHFTSWLCLSPGNKISGGKVLSPKTRRSSSRIAAALRLAATTIGRSDTAL
+ GAFYRRLSSRIGKAKAVTATARKLAILFYNALKYGQKYVDPGADYYEERYRNRVLDGL
+ KRRAKSLGYSLQQDPELCV"
+ misc_feature complement(<3004018..3004164)
+ /locus_tag="SARI_03077"
+ /note="Transposase IS116/IS110/IS902 family; Region:
+ Transposase_20; pfam02371"
+ /db_xref="CDD:217002"
+ gene complement(3004624..3005052)
+ /locus_tag="SARI_03078"
+ CDS complement(3004624..3005052)
+ /locus_tag="SARI_03078"
+ /inference="similar to AA sequence:INSD:ABL64095.1"
+ /note="'COG: COG3547 Transposase and inactivated
+ derivatives;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572060.1"
+ /db_xref="GI:161504948"
+ /translation="MSKEISMKKSSRMSVIHPHAAGVDIGAEFHVVAVPPDADAAPVR
+ TFQRFTADLHRMSDWLKTCHITTIAMESTGVYWLPAFEIPEAAGFNVILVNAREAKNV
+ PGRKTDVNDAQWLQKLHSFGLLRASFRPEHDISVLRSYLR"
+ misc_feature complement(3004627..3004992)
+ /locus_tag="SARI_03078"
+ /note="Transposase; Region: DEDD_Tnp_IS110; pfam01548"
+ /db_xref="CDD:216564"
+ gene complement(3005196..3005519)
+ /locus_tag="SARI_03079"
+ CDS complement(3005196..3005519)
+ /locus_tag="SARI_03079"
+ /inference="protein motif:HMMPfam:IPR002514"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:INSD:CAD48417.1"
+ /note="'COG: COG2963 Transposase and inactivated
+ derivatives;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572061.1"
+ /db_xref="GI:161504949"
+ /db_xref="InterPro:IPR002514"
+ /db_xref="InterPro:IPR009057"
+ /translation="MKKRNFSAEFKRESAQLVVDQNYTVADAAKAMDAGLSTMTRWVK
+ QLRDERQGKTPKASPMTPEQIEIREQKKKLQRNEMENEILKNCPWGKPRPESQKLPGK
+ VGRLI"
+ misc_feature complement(<3005253..3005519)
+ /locus_tag="SARI_03079"
+ /note="Transposase and inactivated derivatives [DNA
+ replication, recombination, and repair]; Region: COG2963"
+ /db_xref="CDD:225511"
+ misc_feature complement(3005292..3005516)
+ /locus_tag="SARI_03079"
+ /note="Transposase; Region: HTH_Tnp_1; cl17663"
+ /db_xref="CDD:248217"
+ gene 3005604..3006200
+ /locus_tag="SARI_03080"
+ CDS 3005604..3006200
+ /locus_tag="SARI_03080"
+ /inference="similar to AA sequence:REFSEQ:ZP_01556046.1"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572062.1"
+ /db_xref="GI:161504950"
+ /translation="MCGWIIAVIICDIFSTGEKFRQWTDIFLILTAVGNGIFWVSDRE
+ VAVGKTAYEETITDINDAAKYLLVQVKDYSHMCDNNRLSEMSSCQWASYIQETLENIA
+ GTKSSVIEYVIPENIDTFYKIPEYYNNQVSPDKIRQEFQDYNKKLCPNKALSKTITQL
+ PPPSRWCQTPPPQRTVMPFKRENLKQACQTVSLSPMNV"
+ gene 3006287..3006544
+ /locus_tag="SARI_03081"
+ CDS 3006287..3006544
+ /locus_tag="SARI_03081"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572063.1"
+ /db_xref="GI:161504951"
+ /translation="MWFIAMSIFIGGKIANVMTKIGNVDNRVTSEKHRIKFIILTAFR
+ FIKRILIKCVTLSQKTFFSTVTIIKKLRAERKKPNQNSKNI"
+ gene complement(3006888..3008156)
+ /locus_tag="SARI_03082"
+ CDS complement(3006888..3008156)
+ /locus_tag="SARI_03082"
+ /inference="protein motif:Gene3D:IPR013762"
+ /inference="protein motif:HMMPfam:IPR002104"
+ /inference="protein motif:superfamily:IPR011010"
+ /inference="similar to AA sequence:REFSEQ:ZP_00699371.1"
+ /note="'COG: COG0582 Integrase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572064.1"
+ /db_xref="GI:161504952"
+ /db_xref="InterPro:IPR002104"
+ /db_xref="InterPro:IPR011010"
+ /db_xref="InterPro:IPR013762"
+ /translation="MALTDTKVRSAKPEEKEYSLVDGDGMFLLVKPNGSRYWRFRFRF
+ GGKQHLMAFGVYPDVSLADARKKREEARRLVAAGIDPREHKRAVKEEQAKEIITFEKV
+ AREWLVTNQKWSEDHANRVKKSLEDNIFPAIGTRNIAELGTRDLLIPIKAVETSGRLE
+ VASRLQQRTTAIMRYAVQSGVIDYNPAQERAGAVASSNRQHRPALELKRIPELLEKID
+ GYIGRPLTRWATELTLLIFIRSSELCFARWSEIDFETSMWTIPPEREPIPGVKHSQRG
+ SKMRTPHLVPLSKQALAILKQIKQFCGEHELIFIGDHDPRKPMSENTVNSALRVMGYD
+ TKVEVCGHGFRTMACSSLIESGLWSKDAVERQMSHMEHNSVRAAYIHKAEHLDERKLM
+ LQWWADFLDANRDKGITPFDYAKINRGNGV"
+ misc_feature complement(3006951..3008150)
+ /locus_tag="SARI_03082"
+ /note="integrase; Provisional; Region: PRK09692"
+ /db_xref="CDD:170049"
+ misc_feature complement(3006963..3008078)
+ /locus_tag="SARI_03082"
+ /note="Bacteriophage P4 integrase. P4-like integrases are
+ found in temperate bacteriophages, integrative plasmids,
+ pathogenicity and symbiosis islands, and other mobile
+ genetic elements. They share the same fold in their
+ catalytic domain and the overall...; Region: INT_P4;
+ cd00801"
+ /db_xref="CDD:238416"
+ misc_feature complement(order(3007020..3007022,3007050..3007052,
+ 3007122..3007124,3007131..3007133,3007323..3007325,
+ 3007440..3007442))
+ /locus_tag="SARI_03082"
+ /note="active site"
+ /db_xref="CDD:238416"
+ misc_feature complement(order(3007020..3007022,3007050..3007052,
+ 3007122..3007124,3007131..3007133,3007323..3007325,
+ 3007440..3007442))
+ /locus_tag="SARI_03082"
+ /note="Int/Topo IB signature motif; other site"
+ /db_xref="CDD:238416"
+ gene 3008493..3009131
+ /locus_tag="SARI_03083"
+ CDS 3008493..3009131
+ /locus_tag="SARI_03083"
+ /inference="similar to AA sequence:INSD:CAI36042.1"
+ /note="'KEGG: fal:FRAAL2247 1.4e-11 chromosome
+ partitioning protein (partial match) K08253;
+ COG: COG1192 ATPases involved in chromosome partitioning;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572065.1"
+ /db_xref="GI:161504953"
+ /translation="MKNADAPDLPTLIAAILSTKGGVAKTTDTANLGGYLADQGLKVL
+ MIDADIRQPTLSSYYPLDNEAPGGIYELIAQNELDPAIIISHTSIPGLDIIISNDPRG
+ ELMSLLQAAPDGVIRLRHLVRQITGYDVILIDTIGARTIALEMVLLASDLIISPVLPE
+ MLSAREFLRGTLQMYRDLQPFTRYGIPLPPLKAVINKLDHTNDAREIHHNLL"
+ misc_feature 3008529..>3008639
+ /locus_tag="SARI_03083"
+ /note="ParA and ParB of Caulobacter crescentus belong to a
+ conserved family of bacterial proteins implicated in
+ chromosome segregation. ParB binds to DNA sequences
+ adjacent to the origin of replication and localizes to
+ opposite cell poles shortly following the...; Region:
+ ParA; cd02042"
+ /db_xref="CDD:238997"
+ misc_feature 3008535..3008987
+ /locus_tag="SARI_03083"
+ /note="AAA domain; Region: AAA_31; pfam13614"
+ /db_xref="CDD:222264"
+ misc_feature 3008550..3008570
+ /locus_tag="SARI_03083"
+ /note="P-loop; other site"
+ /db_xref="CDD:238997"
+ misc_feature 3008568..3008570
+ /locus_tag="SARI_03083"
+ /note="Magnesium ion binding site [ion binding]; other
+ site"
+ /db_xref="CDD:238997"
+ misc_feature <3008874..3009080
+ /locus_tag="SARI_03083"
+ /note="ParA and ParB of Caulobacter crescentus belong to a
+ conserved family of bacterial proteins implicated in
+ chromosome segregation. ParB binds to DNA sequences
+ adjacent to the origin of replication and localizes to
+ opposite cell poles shortly following the...; Region:
+ ParA; cd02042"
+ /db_xref="CDD:238997"
+ misc_feature 3008892..3008894
+ /locus_tag="SARI_03083"
+ /note="Magnesium ion binding site [ion binding]; other
+ site"
+ /db_xref="CDD:238997"
+ gene 3009186..3009377
+ /locus_tag="SARI_03084"
+ CDS 3009186..3009377
+ /locus_tag="SARI_03084"
+ /note="'COG: COG1192 ATPases involved in chromosome
+ partitioning;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572066.1"
+ /db_xref="GI:161504954"
+ /translation="MTPVYASVAYRRAASLGLPVHRLDTSRARGRATPCAAETMQMLA
+ KELFPQFLALPHQQMEGIA"
+ gene 3009374..3009748
+ /locus_tag="SARI_03085"
+ CDS 3009374..3009748
+ /locus_tag="SARI_03085"
+ /inference="similar to AA sequence:REFSEQ:YP_048636.1"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572067.1"
+ /db_xref="GI:161504955"
+ /translation="MKRKIWRAFCSYYAQHPFEKDDEVIVFFEAADREEARETLPVLM
+ SLLWHIPPEKVDCYNLEDENELRDNSGSLTSPRDWPLFEIGWSNNKPLYSSDLPLLLL
+ PPHQQARLWEAFLACQEGNRDE"
+ gene 3009741..3011096
+ /locus_tag="SARI_03086"
+ CDS 3009741..3011096
+ /locus_tag="SARI_03086"
+ /inference="protein motif:BlastProDom:IPR007694"
+ /inference="protein motif:Gene3D:IPR007693"
+ /inference="protein motif:HMMPfam:IPR007693"
+ /inference="protein motif:HMMPfam:IPR007694"
+ /inference="protein motif:HMMTigr:IPR007692"
+ /inference="similar to AA sequence:INSD:CAF28476.1"
+ /note="'KEGG: plu:plu1031 2.4e-123 unnamed protein
+ product; similar to DNA helicase K02314;
+ COG: COG0305 Replicative DNA helicase;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572068.1"
+ /db_xref="GI:161504956"
+ /db_xref="InterPro:IPR007692"
+ /db_xref="InterPro:IPR007693"
+ /db_xref="InterPro:IPR007694"
+ /translation="MSKRKRPQPPHSVEAEQSVLGGLMLDNDRWDDVTTQISAQDFFI
+ SAHRTIYSHMQTLVEQGNPIDLITLSESLEQQEQLEQVGGFAYLAELSKNTPSAANII
+ PYAQYIASYGELRQLLLLGNELSDMAGQPRSNVADVLNFAEQKLFAIAQSHQDGGLTD
+ ISACFDNVLAGIAQRYEAERGSLSGTPSGLEQLDALTCGFQPADLIIAAARPSVGKTA
+ FALTLCVNALMLRPAQPVQIYSMEMSSEQLLLRLVSLIGRVSQTRLRSGDLGDDDWQQ
+ IGVSASILMNEWKDRLLLDDSGILTPPLLRSRARRSLRQHGIPSLIVVDYLQLMRSGG
+ AENRNQEISTISRSLKALAKELNCPVLALSQLNRALESRLNKRPCNADLRDSGSIEQD
+ ADVILFLYRDELYDPNTLDRGIAEVIVSKQRNGPVGTVRTRFISDQTRFESLCQQGVG
+ S"
+ misc_feature 3009762..3011072
+ /locus_tag="SARI_03086"
+ /note="replicative DNA helicase; Region: DnaB; TIGR00665"
+ /db_xref="CDD:233080"
+ misc_feature 3009762..3010058
+ /locus_tag="SARI_03086"
+ /note="DnaB-like helicase N terminal domain; Region: DnaB;
+ pfam00772"
+ /db_xref="CDD:216111"
+ misc_feature 3010314..3011042
+ /locus_tag="SARI_03086"
+ /note="DnaB helicase C terminal domain. The hexameric
+ helicase DnaB unwinds the DNA duplex at the chromosome
+ replication fork. Although the mechanism by which DnaB
+ both couples ATP hydrolysis to translocation along DNA and
+ denatures the duplex is unknown, a...; Region: DnaB_C;
+ cd00984"
+ /db_xref="CDD:238484"
+ misc_feature 3010371..3010391
+ /locus_tag="SARI_03086"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:238484"
+ misc_feature order(3010386..3010391,3010713..3010715,3010833..3010835,
+ 3010941..3010943,3011007..3011009,3011040..3011042)
+ /locus_tag="SARI_03086"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238484"
+ misc_feature 3010704..3010715
+ /locus_tag="SARI_03086"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:238484"
+ misc_feature order(3010728..3010733,3010749..3010757,3010830..3010856,
+ 3010938..3010943,3010977..3010982)
+ /locus_tag="SARI_03086"
+ /note="DNA binding loops [nucleotide binding]"
+ /db_xref="CDD:238484"
+ gene 3011093..3012577
+ /locus_tag="SARI_03087"
+ CDS 3011093..3012577
+ /locus_tag="SARI_03087"
+ /inference="similar to AA sequence:REFSEQ:YP_364143.1"
+ /note="'COG: NOG06299 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572069.1"
+ /db_xref="GI:161504957"
+ /translation="MNNKLTSTELQSRLLQGNFDRGRSPDERFADPLMETSMIVTLEQ
+ LHPYDLNPRLMRNPNYDDIKESIRRRGLDTPPPITRRPDQDWFIIANGGNTRLSILNE
+ LWRETHDERFWRIQCLYKPWGGTPDQPMLGELRCLIGHLAENDMHGKLSFIERALGIN
+ KARELYQQVEKCQLSQRELAEHLKNDGYPINQSHISRMEQALEYLLPCIPEVLYAGMG
+ RSQVEKLLSLRAASLHLWQRHAAEDVGSFDNLFSSALSLFNDQPEDFAIERVQDELLG
+ LMSQELNVDYNLLLLDVDPSEQKRQAVLGPTPEPPPYIPPEEPEPRPVTRRRKPETEE
+ EDIGAPAPLPEPEEATSLLCEGTEPVTDIWRIPQLWDTTESLRSASDRLAWDLAEHYA
+ IDDRVISDANENGIGFRVMPFASDHPMFTRPQSRACWALLAALNEIPLTKDLASSLTL
+ TLFFQRDADGFFFSDLFLIKAFRLIRIVRRIRELQQEAQHVADD"
+ misc_feature 3011180..3011935
+ /locus_tag="SARI_03087"
+ /note="integrating conjugative element, PFGI_1 class, ParB
+ family protein; Region: ICE_PFGI_1_parB; TIGR03764"
+ /db_xref="CDD:213858"
+ misc_feature 3011210..>3011401
+ /locus_tag="SARI_03087"
+ /note="ParB-like nuclease domain; Region: ParBc;
+ pfam02195"
+ /db_xref="CDD:216926"
+ gene 3012561..3013100
+ /locus_tag="SARI_03088"
+ CDS 3012561..3013100
+ /locus_tag="SARI_03088"
+ /inference="similar to AA sequence:REFSEQ:YP_049727.1"
+ /note="'COG: NOG11459 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572070.1"
+ /db_xref="GI:161504958"
+ /translation="MLPTINQAVLSQVIQALKDGNVRYCEALGFDREELNELNDLTFE
+ ELMHLGNTSAQFLKITINHDVLRKMLVQVRQEQKFQQLVGQAVQLGGSIALISHYFGI
+ STAEISARRRLMGIHVRQGRNQVPGEEEEAAIWNRWQEIKVDNIDSIPALEAMMLLAQ
+ ERSLSLTVVWNLIRQWEKS"
+ misc_feature 3012570..3013091
+ /locus_tag="SARI_03088"
+ /note="Protein of unknown function (DUF2857); Region:
+ DUF2857; pfam11198"
+ /db_xref="CDD:221023"
+ gene 3013119..3014252
+ /locus_tag="SARI_03089"
+ CDS 3013119..3014252
+ /locus_tag="SARI_03089"
+ /inference="similar to AA sequence:REFSEQ:ZP_01518330.1"
+ /note="'COG: NOG08740 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572071.1"
+ /db_xref="GI:161504959"
+ /translation="MTPYIQALINMTGDKLQQRMQKDPTAASDSLLFMGNQHDTVPRR
+ LLQDPLLSPRDKFAWQVIRMQAQDNGGAVFPSYSELQVQLSNRPQDEKASRSTVSRAL
+ LMLRLTRWLSLCHKARDRVSGRILGNIYALHDEPLSVLDAVRFDASYLHLLEQCSRHE
+ NKAIRATAQGILYDIRQDTSLRYLSSRIELLEERARWQQRQSPEETKPETSGLNTVPG
+ KISLGTVSGLSRKPGPDGVVSNQDRAPVRTVPTDLCNSTTARANSSPPNWPPEIPLTH
+ SEKQLVLQAMQNLPPPLCQEVLDDAAQRVARGGIQNPLAYLLATLRKAQDGEFNQYRR
+ GKAAVPEFVPPVVSESEIPARPRQKRDISKLVAEIRAQCLGSG"
+ gene 3014344..3015063
+ /locus_tag="SARI_03090"
+ CDS 3014344..3015063
+ /locus_tag="SARI_03090"
+ /inference="similar to AA sequence:REFSEQ:YP_050138.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572072.1"
+ /db_xref="GI:161504960"
+ /translation="MSKIISLNIKGKKMPDAENIQNAGIQALITTNDLLIQANKEFRV
+ ARLTNDDMDWCIASSRALPEEHRLPWDQNGGAINAPDAFNFSFKLLDIENRPAGACLC
+ TYCPGVEQRENEEPSETGPILNVEMLQNFHIRDSELDGNTLKFSLYAILFFIIETRCT
+ GIRLIEPINDRVANYYIGQGFEDLTEGRKEILWRSSEDLLHWFQEGFAASESHSAIDS
+ EQILGDNEPSMNELDGGENGY"
+ gene 3015053..3015322
+ /locus_tag="SARI_03091"
+ CDS 3015053..3015322
+ /locus_tag="SARI_03091"
+ /inference="similar to AA sequence:REFSEQ:YP_050137.1"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572073.1"
+ /db_xref="GI:161504961"
+ /translation="MATNRKHSCDPFPTHDGYGIDSVNDQPELACKNRKKYTQEELAR
+ ITPRGKCITASKEDVFAIVLASARKTKRPKDPIIEAIGSTYKIAK"
+ gene complement(3015388..3015636)
+ /locus_tag="SARI_03092"
+ CDS complement(3015388..3015636)
+ /locus_tag="SARI_03092"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572074.1"
+ /db_xref="GI:161504962"
+ /translation="MYPKMRDALINATLTNVACGRLSPLHNEDKFMDDKLFSELLDGV
+ NEMVAIEKGEIQPSPDRVYSHDIPDVKERSIKVRSGSD"
+ gene complement(3015926..3016612)
+ /locus_tag="SARI_03093"
+ CDS complement(3015926..3016612)
+ /locus_tag="SARI_03093"
+ /inference="similar to AA sequence:INSD:CAE51727.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572075.1"
+ /db_xref="GI:161504963"
+ /translation="MKRAELDVVVLGEDLPNEGLVKGTVGTIVMVFDTPTLGYLVEFC
+ DEEGRTIAMPALLPAQLKSYFTPGILKTLLVDNNYPVANPVDPDVMADLMRKAAPAEW
+ DAQKRKVFEDIQRLMIHRLDYSDMFEIMDGLEYNGLTLYSLVQAENDEPVWSNIYIRN
+ FETRDNDIYVDPNLSDKVLIGEDGMSVFAYSFNDDCFEIRDKASTDYVIESHTNFSEL
+ LSALIDTVKF"
+ gene complement(3016622..3016948)
+ /locus_tag="SARI_03094"
+ CDS complement(3016622..3016948)
+ /locus_tag="SARI_03094"
+ /inference="similar to AA sequence:REFSEQ:YP_071943.1"
+ /note="'COG: COG3210 Large exoproteins involved in heme
+ utilization or adhesion;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572076.1"
+ /db_xref="GI:161504964"
+ /translation="MNAEHAVIDPKKLAAYALDSTHPTGGHKARVFESALGYNPTNAD
+ VLAARIQEGVLSAPAKVLQANNYGQTMAVDMPILGVNGETAIVRTGWMYETDALVPRL
+ TTIFVK"
+ gene 3017133..3018164
+ /locus_tag="SARI_03095"
+ CDS 3017133..3018164
+ /locus_tag="SARI_03095"
+ /inference="protein motif:HMMPfam:IPR001584"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:REFSEQ:ZP_00923070.1"
+ /note="'KEGG: nha:Nham_4600 1.1e-09 feruloyl esterase;
+ COG: COG3335 Transposase and inactivated derivatives;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572077.1"
+ /db_xref="GI:161504965"
+ /db_xref="InterPro:IPR001584"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012337"
+ /translation="MPIIAPIPRDERRLMQKAIHKTHDKNYARRLTAMLMLHRGDRVS
+ DVARTLCCARSSVGRWINWFTLSGVAGLKSLPAGRTRRWPFEHICTLLRELVKHAPGD
+ FGYQRSRWSTELLAIKINEITGCQLHAGTVRRWLPSAGLVWRRAAPTLRIRDPHKDEK
+ MAAIHKALDECSAEHPVFYEDEVDIHLNPKIGADWQLRGQQKRVVTPGQNEKYYLAGA
+ LHSGTGKVSYVGGNSKSSALFISLLKRLKATYRRAKTITLIVDNYIIHKSRETQRWLK
+ ENPKFRVIYQPVYSPWVNHVERLWQALHDTITRNHQCRSMWQLLKKVRHFMETVSPFP
+ GGKHGLAKV"
+ misc_feature 3017202..3017351
+ /locus_tag="SARI_03095"
+ /note="Homeodomain-like domain; Region: HTH_23; pfam13384"
+ /db_xref="CDD:222091"
+ misc_feature 3017220..3017540
+ /locus_tag="SARI_03095"
+ /note="Winged helix-turn helix; Region: HTH_29; pfam13551"
+ /db_xref="CDD:222216"
+ misc_feature 3017298..3017540
+ /locus_tag="SARI_03095"
+ /note="Homeodomain-like domain; Region: HTH_32; pfam13565"
+ /db_xref="CDD:222226"
+ misc_feature 3017448..3017636
+ /locus_tag="SARI_03095"
+ /note="Winged helix-turn helix; Region: HTH_33; pfam13592"
+ /db_xref="CDD:222248"
+ misc_feature 3017625..3018014
+ /locus_tag="SARI_03095"
+ /note="Transposase and inactivated derivatives [DNA
+ replication, recombination, and repair]; Region: COG3335"
+ /db_xref="CDD:225872"
+ misc_feature 3017658..3018065
+ /locus_tag="SARI_03095"
+ /note="DDE superfamily endonuclease; Region: DDE_3;
+ pfam13358"
+ /db_xref="CDD:222070"
+ gene complement(3018170..3018892)
+ /locus_tag="SARI_03096"
+ CDS complement(3018170..3018892)
+ /locus_tag="SARI_03096"
+ /inference="similar to AA sequence:REFSEQ:YP_072276.1"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572078.1"
+ /db_xref="GI:161504966"
+ /translation="MFRLYRSHDLTRQLDPEDFQYILTPAGSLKEACIHYDLSYEANG
+ HSLTFGLPKEKYSISPHQRPYERRHRSYADPIYDEVEHELQIGWLVGVDTSRHWSSDR
+ NPFYIDDNGDLIFTPTASSWHAWYKDEITSAYRHAIADRQGRKPAPTQRIHHDYYGPT
+ TVPSGKTLNSKAVGRLLAAGGVYNGNIEGFHETAQQLGGDAPAGYDQVMNNKGLIIAG
+ ASVAAGLTMGRLNPLSELDSCA"
+ gene 3019523..3021835
+ /locus_tag="SARI_03097"
+ CDS 3019523..3021835
+ /locus_tag="SARI_03097"
+ /inference="protein motif:HMMPfam:IPR004899"
+ /inference="protein motif:HMMPfam:IPR005546"
+ /inference="protein motif:HMMTigr:IPR006315"
+ /inference="protein motif:superfamily:IPR011050"
+ /inference="similar to AA sequence:INSD:BAB36504.1"
+ /note="'KEGG: eci:UTI89_C0334 5.4e-34 hypothetical
+ protein;
+ COG: COG3468 Type V secretory pathway, adhesin AidA;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572079.1"
+ /db_xref="GI:161504967"
+ /db_xref="InterPro:IPR004899"
+ /db_xref="InterPro:IPR005546"
+ /db_xref="InterPro:IPR006315"
+ /db_xref="InterPro:IPR011050"
+ /translation="MKIAPYLITLMLPFISLSARADYHTQINAGNTVSGDVVDGSKGN
+ QHVYGTLTDSTITGPYTYSYVGDGGQTNHITVTDHGELFLEPGGSAYDTQITAGGVLQ
+ VNGYSENTYVDSGGQVYVNAGNNGVEDPNQGGQIVNTTVSAGGLVVNRYGIDTNTVIE
+ AGGELDTGWNYPYETRNTAISRDTVIQNGGIQQVSNGGTSENSRVDDGGALIVTGTWH
+ YNVVTDSQPSAWYRGTADNTAVYGVMRNKGGFDENTTIQSGGQYTLSGYGLSHQLTVA
+ QGGSAQINDGALDSFWLYGMMDVNSQATLTGTGVVGNSGELVLHEGAKTSGLTLTLDG
+ VLSLQNGSDAGPHNYQIAGLEMNGCTVLFDSTSFATLSMETLSGSGNFWMNTNIAAQQ
+ GDMINVSGEANGDFGIWINDTGESPADPQSLQVVQTGGGDAQFTLLNPNQQVDIGTWE
+ YGLTPDGQGNWSLTPQATPTPSTEAVLAMANVTPTIFQAESRALQTRLDVTRSRPHQG
+ ELWVQALSNRFDVNRTANAAYHQRLGGLMMGYDRSLPRQTGLLTLGIAGGYSRSDLDL
+ ANNSDGSVDSYSAALYASYYDQSRFWLDGMLKGNLFNQHLDARMSSGGHADGSYTIPG
+ LGGNLIAGYDARFANTTLSPFAGFTGFISQSDNYWLSNGMQAHPGTAKSALGQFGFRL
+ RQNITTHSGMQFIPWLKVAMEHEFVHNNPVRVNDDNFNNDIAGTRGNYQAGISAALTQ
+ HTRIYASINYEKGDGMESPWTGNAGFSYRF"
+ misc_feature 3020279..3020917
+ /locus_tag="SARI_03097"
+ /note="Pertactin-like passenger domains (virulence
+ factors), C-terminal, subgroup 1, of autotransporter
+ proteins of the type V secretion system of Gram-negative
+ bacteria. This subgroup includes the passenger domains of
+ Neisseria and Haemophilus IgA1 proteases; Region:
+ PL1_Passenger_AT; cd01343"
+ /db_xref="CDD:238653"
+ misc_feature 3020612..3021832
+ /locus_tag="SARI_03097"
+ /note="outer membrane autotransporter barrel domain;
+ Region: autotrans_barl; TIGR01414"
+ /db_xref="CDD:233402"
+ misc_feature 3021035..3021772
+ /locus_tag="SARI_03097"
+ /note="Autotransporter beta-domain; Region:
+ Autotransporter; pfam03797"
+ /db_xref="CDD:217734"
+ gene complement(3021832..3021975)
+ /locus_tag="SARI_03098"
+ CDS complement(3021832..3021975)
+ /locus_tag="SARI_03098"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572080.1"
+ /db_xref="GI:161504968"
+ /translation="MVDIDRRIYDVNCHNGGLICSINRAYINTKTFLWNNVVFIAEAL
+ RRY"
+ gene 3022228..3023526
+ /locus_tag="SARI_03099"
+ CDS 3022228..3023526
+ /locus_tag="SARI_03099"
+ /inference="protein motif:HMMPfam:IPR003812"
+ /inference="similar to AA sequence:REFSEQ:ZP_00922794.1"
+ /note="'COG: COG3177 Uncharacterized conserved protein;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572081.1"
+ /db_xref="GI:161504969"
+ /db_xref="InterPro:IPR003812"
+ /translation="MPIKRPPALIPFSQLTGADLEAHQHYSRVTDDKGRYLPFDEFCR
+ RTAKGENVAIAWALTRRARNSAMQRINYRNEAGEQAGFVLTPGIMSVCELVDKHATRL
+ ALKELTTRLRGAGKELTALSLEEPITSSQLEGANTTTLVARNMLESGRAPRTEDEHMI
+ AGNARLMDEIPELIQEPLTPDLIRRFHAVGMGGINDEKYRPGEFRDTDDVVIADYDGN
+ IVHQPPAAANLPERLQIVCDFVNDTEHYVHPLVKACILHFMIAHEHLFRDGNGRTSRG
+ LFYWYMLKSGYDVFKYVSISHLLHTAPAKYAHSYQYTETDGMDLTYYLEYQTRIIHRA
+ MTRLLQHVDKLVARAARIDHFLYQSGSLSRLSGRQVTLLNIILAEPDKKYSAAGVAEA
+ LGISDNTARNDLRTLVRENLLTEISENDQKTVYRVSQDLS"
+ misc_feature 3022528..3023505
+ /locus_tag="SARI_03099"
+ /note="Fic family protein [Function unknown]; Region:
+ COG3177"
+ /db_xref="CDD:225718"
+ misc_feature 3022756..3023073
+ /locus_tag="SARI_03099"
+ /note="Fic/DOC family; Region: Fic; pfam02661"
+ /db_xref="CDD:217170"
+ gene 3023759..3024457
+ /locus_tag="SARI_03100"
+ CDS 3023759..3024457
+ /locus_tag="SARI_03100"
+ /inference="similar to AA sequence:REFSEQ:YP_001021530.1"
+ /note="'COG: NOG07802 non supervised orthologous group;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572082.1"
+ /db_xref="GI:161504970"
+ /translation="MSDYTFNMGPLRSAIHIQLHTHNATRLWTGRRATENGPAPIIGM
+ PRFIEILNQMRIAAEHNDPYADLWMLRMEEKLVQSRKLMQVMLDQAKAMFSELPEGID
+ IENCFNVQPARFPLFINAPLAYQGIYLLTDFDQLARQLLLASHIAIISRREMHNRLNN
+ GATVIRSAFGLAQKYHGSGLTRQEFIDDTPQAKAAIERLGPLPEAILSGKLRSSFSSP
+ LPGKTENPGVAEDE"
+ misc_feature 3023783..3024415
+ /locus_tag="SARI_03100"
+ /note="integrating conjugative element protein, PFL_4669
+ family; Region: ICE_PFL4669; TIGR03761"
+ /db_xref="CDD:234348"
+ gene 3024450..3024941
+ /locus_tag="SARI_03101"
+ CDS 3024450..3024941
+ /locus_tag="SARI_03101"
+ /inference="similar to AA sequence:INSD:AAY93913.1"
+ /note="'COG: NOG11060 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572083.1"
+ /db_xref="GI:161504971"
+ /translation="MNNPITGYQSLADEDYKMLAYVSSLKGLLKPFKSKGELELLESN
+ AQSVREMMEPLMQRLIRSARRYPVRQLPLIFTIGPAPSGANFLRWRNQQNNKSGTPAF
+ SNLIGDPKIPQRARDALLEIERDRIVFNMQMSVLTFIIRQARECQEKMNQAEKLYQGR
+ QNS"
+ misc_feature 3024471..3024929
+ /locus_tag="SARI_03101"
+ /note="Protein of unknown function (DUF3158); Region:
+ DUF3158; pfam11358"
+ /db_xref="CDD:151799"
+ gene 3025455..3025922
+ /locus_tag="SARI_03102"
+ CDS 3025455..3025922
+ /locus_tag="SARI_03102"
+ /inference="similar to AA sequence:REFSEQ:YP_001021552.1"
+ /note="'COG: NOG13362 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572084.1"
+ /db_xref="GI:161504972"
+ /translation="MYSAYHQVTRVATREDPMNEKTYFNLYTSGLGYVNRVRTVTPKR
+ GEPFLCCDIAALSGAADDVDYVRFDCKVTGSEARKLIARCEQAVNEKRKVLIHFRLGD
+ LYVDMFTYSKGERKGETGVSLKARLLYIGLVKIDGEVVWQAGNQETEAEADAA"
+ misc_feature 3025509..3025904
+ /locus_tag="SARI_03102"
+ /note="Protein of unknown function (DUF3577); Region:
+ DUF3577; pfam12101"
+ /db_xref="CDD:152536"
+ gene 3026043..3026507
+ /locus_tag="SARI_03103"
+ CDS 3026043..3026507
+ /locus_tag="SARI_03103"
+ /inference="similar to AA sequence:REFSEQ:ZP_01498221.1"
+ /note="'COG: NOG08741 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572085.1"
+ /db_xref="GI:161504973"
+ /translation="MARITGWIITLLMLGGCTAPQRPIAPVPKPATLPAPEVVRYDRY
+ LLINTRPDEAQRNPLHQIVNINLPLNLKLTVGDAFAWLLKQSGYSLCVDDHPTQFLAG
+ KPLPLSQYRLGPMRLEEALKTLAGPGWLMQTDVLNREVCFHLNIPGTGDHHA"
+ misc_feature 3026157..3026468
+ /locus_tag="SARI_03103"
+ /note="conjugative transfer region protein, TIGR03748
+ family; Region: conj_PilL"
+ /db_xref="CDD:163460"
+ gene complement(3026260..3026874)
+ /locus_tag="SARI_03105"
+ CDS complement(3026260..3026874)
+ /locus_tag="SARI_03105"
+ /note="'Psort location: extracellular, including cell
+ wall, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572086.1"
+ /db_xref="GI:161504975"
+ /translation="MFCLCAAARGGLLLQVLITGAQGLDLSLQFIELFVDGVKSFGLS
+ AGGIVKLPGKGFGAPGNVFYGNLQLAIIAVWLRLVMPLRYLALCLLLRQRLGIQAVET
+ PEHRRCQQQESCTGSQVSQTFKHDGLPFPVCSGENRLRGSVRRSASASPARPAFSAPL
+ PAASGRAGIAKAAAVCQPETALDGHRRTGCSRSASAARQRRRQR"
+ gene 3026500..3027108
+ /locus_tag="SARI_03104"
+ CDS 3026500..3027108
+ /locus_tag="SARI_03104"
+ /inference="similar to AA sequence:REFSEQ:YP_234546.1"
+ /note="'COG: NOG14148 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572087.1"
+ /db_xref="GI:161504974"
+ /translation="MLKRLAYLATGAALLLLAAAVFWCFNRLNAQALAQQQTQRQIAQ
+ WHDQPQPDSDYRELEVTVKNITGRTEALTRQLDDAASAQAERLNPINEQLNELKGQIQ
+ ALSASYQHLQQQTATRSRAKAKHPVSSPLWAAKAPFSLISSEFRAGRQFAVIAPSGYR
+ SLSQLQLVAPGDNVQGWQLLQLDGSHATFRKGGQRLTLNAGE"
+ misc_feature 3026653..>3026841
+ /locus_tag="SARI_03104"
+ /note="seryl-tRNA synthetase; Region: serS; TIGR00414"
+ /db_xref="CDD:232965"
+ gene 3027114..3027764
+ /locus_tag="SARI_03106"
+ CDS 3027114..3027764
+ /locus_tag="SARI_03106"
+ /inference="protein motif:Gene3D:IPR002376"
+ /inference="protein motif:superfamily:IPR002376"
+ /inference="similar to AA sequence:REFSEQ:NP_928397.1"
+ /note="'COG: NOG08743 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572088.1"
+ /db_xref="GI:161504976"
+ /db_xref="InterPro:IPR002376"
+ /translation="MRRYLLLCLLLLPLFASPQQTRIEEQAITHTQAQQWGLTDSEWQ
+ LYQQLRQGERGIWSPGLDPLTTLGVEASSDAERQRFAELLARKEHQRVEKELAFQRAY
+ DQAWKRLYPTLTPIRSVVQPRLALFVSEKCPACETLAQKLINDDRPLDIWLVNSHNDD
+ ASLQRWAQRQHIDMRKVERGQITLNHDNGRWQRLGGGKLPLLLEQQGEQWRPVSAP"
+ misc_feature 3027204..3027746
+ /locus_tag="SARI_03106"
+ /note="integrating conjugative element protein, PFL_4693
+ family; Region: conj_TIGR03759"
+ /db_xref="CDD:234347"
+ gene 3027761..3028273
+ /locus_tag="SARI_03107"
+ CDS 3027761..3028273
+ /locus_tag="SARI_03107"
+ /inference="protein motif:HMMPfam:IPR008258"
+ /inference="similar to AA sequence:REFSEQ:NP_928398.1"
+ /note="'COG: COG0741 Soluble lytic murein transglycosylase
+ and related regulatory proteins (some contain LysM/invasin
+ domains);
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572089.1"
+ /db_xref="GI:161504977"
+ /db_xref="InterPro:IPR008258"
+ /translation="MIVGLLISTHASAVPPLYAQIARQQQIPAELLYAVARAESGTRL
+ AQGLHPWPWTLNIAGTGYRYPSRSSACRALLAFARTRSLKRIDAGLGQINLGWNGQWF
+ PSLCASFDPTDNLTVTALLLRQHYNASPGSWLDAAARYHHPAGGKPAAIYRHKISQQI
+ RLLSASGTSP"
+ misc_feature <3028019..3028228
+ /locus_tag="SARI_03107"
+ /note="Lytic Transglycosylase (LT) and Goose Egg White
+ Lysozyme (GEWL) domain. Members include the soluble and
+ insoluble membrane-bound LTs in bacteria, the LTs in
+ bacteriophage lambda, as well as, the eukaryotic
+ "goose-type" lysozymes (GEWL). LTs...; Region:
+ LT_GEWL; cd00254"
+ /db_xref="CDD:238157"
+ misc_feature order(3028040..3028042,3028121..3028123,3028178..3028180)
+ /locus_tag="SARI_03107"
+ /note="N-acetyl-D-glucosamine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:238157"
+ gene 3028270..3028677
+ /locus_tag="SARI_03108"
+ CDS 3028270..3028677
+ /locus_tag="SARI_03108"
+ /inference="similar to AA sequence:INSD:CAI07484.1"
+ /note="'COG: NOG13628 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572090.1"
+ /db_xref="GI:161504978"
+ /translation="MKHLIPAMLLFTVTAIAGPAVPMQALDEARLLPVVTHNLHLGQQ
+ PRLALSLPGMTPLFLIGDDPQSTEWLRQHRDALKTLHATGLVVNVATLARLNALRTIA
+ PALTLLPVSADDMAKHLPITAYPVLITDKGLEQ"
+ misc_feature 3028360..3028674
+ /locus_tag="SARI_03108"
+ /note="integrating conjugative element protein, PFL_4695
+ family; Region: ICE_PFL_4695; TIGR03765"
+ /db_xref="CDD:234349"
+ gene 3028674..3030707
+ /locus_tag="SARI_03109"
+ CDS 3028674..3030707
+ /locus_tag="SARI_03109"
+ /inference="similar to AA sequence:INSD:CAI07483.1"
+ /note="'COG: NOG06089 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572091.1"
+ /db_xref="GI:161504979"
+ /translation="MRLDFILRPAVELYSASAALLAAVWCIVAPQMLLLTPYSGWLLA
+ LALIALSALRLKQGIRILRFRHRVRHLPLWTLSASRIPLLPDALFLGRGFRWLPTHTQ
+ RLYLCRLPQCEHWLRTDRPSTSGGDPLLHGVELREGHVTLPLRDRPGHTLVLGTTRVG
+ KTRLAELLIAQDIRRGDTVIVFDPKGDADLLRRVWAEAHRAGRESVFWLFHLGWPEIS
+ ARYNAVGRFGRISEVASRIAGQLSTEGNSAAFREFAWRFVNIITRALVALGQRPDYAR
+ IARHVINIDELFIDYARVFLPGHDRQAWDNVVRIAGGITEKNTPRNLQGRDSYVVALE
+ QYLSTTRLHDPILDGLRSAVRYDKTYFDKIVASLLPLLEKLTTGKIAQLLAPDYGDLN
+ DPRPVFDWQQAIRQRAIVYVGLDALSDAEIAAAVGNSMFADLVSVAGHIYKHGVMDGL
+ PQTEEKAAINLHCDEFSELMGDEFIPLINKGGGAGVQVTAYTQTLSDIEARIGDRAKA
+ GQVVGNFNSLIMMRVRETATAELLTKQLPQVDVLSNSVSSGVTDSTDAQGNIGFSSNT
+ QDRVSSVQVPLLEPASLVQLPKGQAFALLEGGQLWKLRIPLPDAAHDPLMPENIAQIA
+ RDMEKQYDSAPVWWNRPEAVVTEKNDPILWLNDSETTEKHTDDTPDTPPARER"
+ misc_feature 3028689..3030497
+ /locus_tag="SARI_03109"
+ /note="TraM recognition site of TraD and TraG; Region:
+ TraG-D_C; cl17375"
+ /db_xref="CDD:247929"
+ misc_feature 3028692..3030497
+ /locus_tag="SARI_03109"
+ /note="conjugative coupling factor TraD, SXT/TOL
+ subfamily; Region: SXT_TraD; TIGR03743"
+ /db_xref="CDD:234339"
+ gene 3030712..3030936
+ /locus_tag="SARI_03110"
+ CDS 3030712..3030936
+ /locus_tag="SARI_03110"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572092.1"
+ /db_xref="GI:161504980"
+ /translation="MWPAQTLPLPLQQAVDALTQGETPDQIIARMNLQGFQAWREPAS
+ PQDEHDIFQVRLDEAHEARFLCRYVTLPLH"
+ gene 3030936..3031616
+ /locus_tag="SARI_03111"
+ CDS 3030936..3031616
+ /locus_tag="SARI_03111"
+ /inference="similar to AA sequence:REFSEQ:ZP_01498203.1"
+ /note="'COG: NOG08744 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572093.1"
+ /db_xref="GI:161504981"
+ /translation="MPDHAPQPVRRPGLLGWIALLPGVLVGFCLGAWMLAIALEWLGD
+ AFFWRNTCASHSEQVLQATWQWWRGSAGAPVWLVENLALISDTLQQGIAALIHSLNGQ
+ SGLFWTETVTTVIRCALMSAGNVTLTFLLRLAILLQALPLFALTITIGLIDGLVRRDL
+ RRFGAGHESGFVYHHARRMISSCLIATGLMWLAVPIFLVPEYVFIPAAAGIGLAVSMT
+ GGSFKKYV"
+ misc_feature 3030966..3031610
+ /locus_tag="SARI_03111"
+ /note="Domain of unknown function (DUF4400); Region:
+ DUF4400; cl14023"
+ /db_xref="CDD:246606"
+ gene 3031747..3032520
+ /locus_tag="SARI_03112"
+ CDS 3031747..3032520
+ /locus_tag="SARI_03112"
+ /inference="similar to AA sequence:INSD:EAY42801.1"
+ /note="'COG: NOG14807 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572094.1"
+ /db_xref="GI:161504982"
+ /translation="MTSKLNWLLQNTSPGSLVLQSWLTRNNISPSLAFKYAQNGWLVK
+ LRAGVYARAGREPDWSDALWCLQSQLEASVHLAGLSSLSWQGRSHYLQLKQNQCWLSV
+ ENKAILPKWFKEFPGVEWLMVSALKLPQLDEKYRTELEVKGKRITASTPELAAYELLS
+ AVPQEISFEHAAELFQGLVNLNPRKVERLLTLSQSVQTKRLYLFFASFYEHAWFKRVD
+ TSKIDLGSGNRQVVVNGKLNTRYQITVPKNFTKKGISHG"
+ misc_feature 3032191..3032397
+ /locus_tag="SARI_03112"
+ /note="Protein of unknwon function (DUF2893); Region:
+ DUF2893; pfam11459"
+ /db_xref="CDD:151898"
+ gene 3032513..3032716
+ /locus_tag="SARI_03113"
+ CDS 3032513..3032716
+ /locus_tag="SARI_03113"
+ /inference="similar to AA sequence:INSD:AAL59716.1"
+ /note="'COG: NOG11851 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572095.1"
+ /db_xref="GI:161504983"
+ /translation="MDKASPYYRQVALLVRALPYVANEPCFTLKGGTAINLFIRDFPR
+ LSVDINLAYIPLESSLLLYRKSH"
+ misc_feature 3032552..>3032689
+ /locus_tag="SARI_03113"
+ /note="Nucleotidyl transferase of unknown function
+ (DUF1814); Region: DUF1814; pfam08843"
+ /db_xref="CDD:220039"
+ gene complement(3032740..3033549)
+ /locus_tag="SARI_03114"
+ CDS complement(3032740..3033549)
+ /locus_tag="SARI_03114"
+ /inference="protein motif:Gene3D:IPR011990"
+ /inference="protein motif:HMMPfam:IPR013105"
+ /inference="similar to AA sequence:INSD:ABE63059.1"
+ /note="'COG: NOG10986 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572096.1"
+ /db_xref="GI:161504984"
+ /db_xref="InterPro:IPR011990"
+ /db_xref="InterPro:IPR013105"
+ /translation="MEIKFPGRKKIDNYVEKTDPEAIQNALHEAQEIMYDAWDADDAI
+ NAIQLIKKALRKSPLCADAYSYYSYISGDSPLSKLAYLENAVYVGEKALEAPVSDFKG
+ DCWSIIETRPYMRARACLASCLWDIGYYDKAISNYQEMLELNPNDNQGVRYILSSHYL
+ DLEMINELKVLLASYPDDSSPFFLYTTALLAFRDKSSSADAAAREAISGNHYIPVFLK
+ GRTKLYENNQGYITAGGCDEAIEYVNNNLLAWIRTPGALDWLADINKSINK"
+ gene 3033731..3034102
+ /locus_tag="SARI_03115"
+ CDS 3033731..3034102
+ /locus_tag="SARI_03115"
+ /inference="protein motif:HMMTigr:IPR010040"
+ /inference="similar to AA sequence:INSD:EAV72246.1"
+ /note="'COG: NOG17699 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572097.1"
+ /db_xref="GI:161504985"
+ /db_xref="InterPro:IPR010040"
+ /translation="MAIAFSANLQVKPILLQATSMLKVLLNIVSLFITSSAFAASLTE
+ REELTLSLNQLTQIEASLHRAQKSARTGINERYYFDYPRIHSDITTLRSGIEHYLTPT
+ RAQPRDTPTLVGQYREEKTTP"
+ misc_feature 3033815..3034078
+ /locus_tag="SARI_03115"
+ /note="integrative conjugative element protein, RAQPRD
+ family; Region: ICE_RAQPRD; TIGR01690"
+ /db_xref="CDD:162489"
+ misc_feature <3033890..3034078
+ /locus_tag="SARI_03115"
+ /note="Plasmid protein of unknown function
+ (Plasmid_RAQPRD); Region: Plasmid_RAQPRD; pfam09686"
+ /db_xref="CDD:150373"
+ gene 3034099..3034332
+ /locus_tag="SARI_03116"
+ CDS 3034099..3034332
+ /locus_tag="SARI_03116"
+ /note="'COG: NOG18546 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572098.1"
+ /db_xref="GI:161504986"
+ /translation="MSPEQISAFQDASLVKPDAVSLVMLGLFSAFLLLWVVWVLNDAY
+ RGVATARVSWRALGSIGGRTILLLLVSFWLVLS"
+ misc_feature 3034099..>3034272
+ /locus_tag="SARI_03116"
+ /note="Protein of unknown function (DUF3262); Region:
+ DUF3262; pfam11660"
+ /db_xref="CDD:152096"
+ gene 3034351..3034677
+ /locus_tag="SARI_03117"
+ CDS 3034351..3034677
+ /locus_tag="SARI_03117"
+ /inference="similar to AA sequence:INSD:ABA74755.1"
+ /note="'COG: NOG17700 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572099.1"
+ /db_xref="GI:161504987"
+ /translation="MNKRIFRWLLWFPALPAYADLPEMEDPSRGQGDGIMETLQNYGY
+ DIVILMTLGICAVGFLVVANNCIATYSEIQGGRKQWKDLGAMAGVGAVLLVITIWLLN
+ QASDIL"
+ misc_feature 3034375..3034674
+ /locus_tag="SARI_03117"
+ /note="integrating conjugative element membrane protein,
+ PFL_4702 family; Region: conj_TIGR03745"
+ /db_xref="CDD:234341"
+ gene 3034681..3035034
+ /locus_tag="SARI_03118"
+ CDS 3034681..3035034
+ /locus_tag="SARI_03118"
+ /inference="similar to AA sequence:INSD:ABA74756.1"
+ /note="'COG: NOG17701 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572100.1"
+ /db_xref="GI:161504988"
+ /translation="MSTIPFLPERLNREPAVFRGLTVSELLIALLVGLTAGAVVGVIP
+ AILCRNWSLIPSSALPGGALAILCGGRWLARLKRGRPESWLYRALELKLARFGIGTQR
+ FVLHDGVWAIRRSRR"
+ misc_feature 3034690..3035022
+ /locus_tag="SARI_03118"
+ /note="conjugative transfer region protein, TIGR03750
+ family; Region: conj_TIGR03750"
+ /db_xref="CDD:163462"
+ gene 3035031..3035657
+ /locus_tag="SARI_03119"
+ CDS 3035031..3035657
+ /locus_tag="SARI_03119"
+ /inference="similar to AA sequence:REFSEQ:YP_001021580.1"
+ /note="'COG: NOG07920 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572101.1"
+ /db_xref="GI:161504989"
+ /translation="MSTFKHALAARDAHIRTLHIALVALFLLASGMGFGWYSAPRQLT
+ VYLPPDLRAASQRPWWEVPPATVYAFAFSVFQQINRWPTNGEADYPRNLSALRAYLTP
+ GCYSQIDHEFRQRLQNSELRDRVRGVYEIPGRGFSDKRVQILDRDNWIVTLDLTVDEY
+ FHSEPVKRTMVRYPIKVLRYNIDQQKNPWGLALDCFSSPPQKLEAAKP"
+ misc_feature 3035040..3035645
+ /locus_tag="SARI_03119"
+ /note="integrating conjugative element protein, PFL_4703
+ family; Region: conj_TIGR03746"
+ /db_xref="CDD:163458"
+ gene 3035654..3036436
+ /locus_tag="SARI_03120"
+ CDS 3035654..3036436
+ /locus_tag="SARI_03120"
+ /inference="similar to AA sequence:REFSEQ:NP_928407.1"
+ /note="'COG: NOG07921 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572102.1"
+ /db_xref="GI:161504990"
+ /translation="MNIRPLLILLVALPLHAVKLVKWERIPLPVALNTGQERIIFVDR
+ NVRVGYPAALEGKLRIQSSNGTLYLLASQPFAATRLQLQDTENGELILLDVSASKGEH
+ IREPIRIVREEKKTPDAKPDAVPEPSTPLPVALTRYAAQMLYAPLRTVEPLPGVQPEG
+ VRLAKTITTLLPALPVSAIPIGGWKLDHYHLAAIRLQNKSTTRLELDPRQLQGRFYAA
+ SFQHRWLGPAGSAEDTTVLYLITHNHRPEQAILPEPAPEKKK"
+ misc_feature 3035711..3036433
+ /locus_tag="SARI_03120"
+ /note="Protein of unknown function (DUF3438); Region:
+ DUF3438; pfam11920"
+ /db_xref="CDD:221314"
+ gene 3036433..3037770
+ /locus_tag="SARI_03121"
+ CDS 3036433..3037770
+ /locus_tag="SARI_03121"
+ /inference="protein motif:superfamily:IPR011047"
+ /inference="similar to AA sequence:REFSEQ:ZP_01498194.1"
+ /note="'COG: NOG06300 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572103.1"
+ /db_xref="GI:161504991"
+ /db_xref="InterPro:IPR011047"
+ /translation="MKLQANILLRVLTPLILLAGCVLLFHACQDRKTTPSTSSAPATP
+ LSHDELKALGIEGDTPADTVATLVGQMKLWRKELETVKASNAALVQENQRLREREQNT
+ DSRISEAINRQQTSASQQQNELLNSLQTQIQQLKGNRTTDDSLAGLGIDEPEAASGEP
+ LRWIAPADALPTDKNGRPLQPALAFPSAMHSPTPQPEASPPAAVKPVYTLPQNSTLIG
+ SVAMTALLGRIPLNGSVTDPYPFKVLIGRDNLTANGIELPDIEGAVISGSATGDWTLS
+ CVRGSLTSITFVFRDGTVRTLPAEGDKTGSGTEGNIGWLSDPHGLPCIPGERKSNAAE
+ YIGSQFLLAGSSAAAQALANNQTTSTVEDGSITTALTGDSGQYVLGQALGGGLKESAD
+ WFKQRYGQMFDAIYVPPGQAVAIHITRQLAIDYDPDGRRVNYRTAGERTGDLD"
+ misc_feature 3036565..3037737
+ /locus_tag="SARI_03121"
+ /note="integrating conjugative element protein, PFL_4705
+ family; Region: conj_TIGR03752"
+ /db_xref="CDD:234342"
+ misc_feature <3036616..3036753
+ /locus_tag="SARI_03121"
+ /note="Protein of unknown function (DUF904); Region:
+ DUF904; pfam06005"
+ /db_xref="CDD:203371"
+ gene 3037770..3038159
+ /locus_tag="SARI_03122"
+ CDS 3037770..3038159
+ /locus_tag="SARI_03122"
+ /inference="similar to AA sequence:INSD:ABA74760.1"
+ /note="'COG: NOG14028 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572104.1"
+ /db_xref="GI:161504992"
+ /translation="MRTLILLLSLLLSACSTDQKTLLPVDENTTMLNIWGRQNNDAQA
+ LYDARSVLRRPLDDATMTAQQQQATRSDGNATKALFRRLPNPDLEMYIFPHLAGSEGV
+ PVPGYTTVFPFYNRVQYALPGERTDPL"
+ misc_feature 3037809..3038147
+ /locus_tag="SARI_03122"
+ /note="conjugative transfer region lipoprotein, TIGR03751
+ family; Region: conj_TIGR03751"
+ /db_xref="CDD:200321"
+ gene 3038159..3040825
+ /locus_tag="SARI_03123"
+ CDS 3038159..3040825
+ /locus_tag="SARI_03123"
+ /inference="similar to AA sequence:INSD:ABI26032.1"
+ /note="'COG: NOG06090 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572105.1"
+ /db_xref="GI:161504993"
+ /translation="MMRSGTLTEQTVDGLYQKGASFVDFLPWVEYQPESKTLLLDDGR
+ SVGAVYDITPFGTEGRSPARLEELRDILKDALQDSFTEYDRHPWVVQFYCQDEDDTAG
+ WLAALHDYAVPEAQNSDFTRAWLNEMERHLHAVSRPEGYFLDDAISHTRWRAQQRHTR
+ MVVYRWLPNKSRDPLEDSPEEALNTVCERMVSALSGAGIHARRLECEAIRHWLLRWFN
+ PAPQMADSPRQFWQQMAQQDDTPELHDFAESLLCSEPRSQVAQGTWLFDQRPHKVIVL
+ DRLRKPPTVGHMTGESARGDGINALFDLLPEGVIMALTIVVWPQDRLEEHLSRLSDRA
+ IGENVESEYTKKDCQEVRHWLKDGHKLYRSSLAFYLSAPDNGELTKRVRSLNSLLLNA
+ GMVPVQENDELAPLSSWLRWLPMCFDPARDKRQLYTRFSFVQHLANLLPLFGRESGTG
+ HPGVSYFNRGGGMLCWDPLNREDRAQNGHLLLLGPTGAGKSATLNAKIAQLMALHRPR
+ LFIVEAGNSFGLMADYAREHGLTVNKISLKPGSGITLPLFADAWKLAESDAPSAEPDD
+ DDPEDADNEQRDLLGEMEITARLMITGGELKEDARLTRSDRALIREAILHAARLTACE
+ QRQTLTQDIRDALFTLAQDAALPESRRNRLWEMGEAMNMFCSGFEGELFNREGEAWPE
+ ADITLVDLAMFAREGYEAQLAIAYISLINHINNLGERDQHLARPIVNITDEAHIITVN
+ PLLARFLTKGSKMWRKLGIFLWLATQNLADFPDEAKKLLNMIEWWELLVMPPEEVEQV
+ SRFKSLTLEQRQLLLSATKAPGKYTEGVVLSPRVEALFRVVSPALWLALGMTEKHEKA
+ ERMRIMREFGCSELEAAMRVAEANAITSDVTT"
+ misc_feature 3038180..3040792
+ /locus_tag="SARI_03123"
+ /note="conjugative transfer ATPase, PFL_4706 family;
+ Region: traC_PFL_4706; TIGR03744"
+ /db_xref="CDD:234340"
+ misc_feature 3038219..3039007
+ /locus_tag="SARI_03123"
+ /note="F pilus assembly Type-IV secretion system for
+ plasmid transfer; Region: TraC_F_IV; pfam11130"
+ /db_xref="CDD:220992"
+ misc_feature 3039563..>3039727
+ /locus_tag="SARI_03123"
+ /note="The AAA+ (ATPases Associated with a wide variety of
+ cellular Activities) superfamily represents an ancient
+ group of ATPases belonging to the ASCE (for additional
+ strand, catalytic E) division of the P-loop NTPase fold.
+ The ASCE division also includes ABC; Region: AAA; cl17189"
+ /db_xref="CDD:247743"
+ misc_feature 3039608..3039631
+ /locus_tag="SARI_03123"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature 3039611..3039634
+ /locus_tag="SARI_03123"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:99707"
+ gene complement(3040928..3041110)
+ /locus_tag="SARI_03124"
+ CDS complement(3040928..3041110)
+ /locus_tag="SARI_03124"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572106.1"
+ /db_xref="GI:161504994"
+ /translation="MLQIILKNGFNQLSSIRPKTSLCMSLRNIIMVNFLDVKCIASMN
+ NKTNISIQFTIGYTDI"
+ gene 3041224..3041898
+ /locus_tag="SARI_03125"
+ CDS 3041224..3041898
+ /locus_tag="SARI_03125"
+ /inference="similar to AA sequence:REFSEQ:YP_070092.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572107.1"
+ /db_xref="GI:161504995"
+ /translation="MADIEGIARRIYDIAVSPDTVTGLINGGLSVPLDYGYLIYGIFD
+ TDTRYERETERIRMMTAIRHDILNYENIVSAVKLVFQLFNKYLSESEQDNIYRSVVTS
+ IVGRISTNVIASNIAKAVIEKTSFTYVVFKGKGNPIAFLSTILLFGGMAERSIRTSDS
+ LSNEAPEIYELLRPRDYDLLYFLFADAVQPFVDAIHAGYTEGKPVFDRIMKRVEERLN
+ TNAKVG"
+ gene 3041900..3042247
+ /locus_tag="SARI_03126"
+ CDS 3041900..3042247
+ /locus_tag="SARI_03126"
+ /note="'Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572108.1"
+ /db_xref="GI:161504996"
+ /translation="MKKLIAPIVNIALCTYIVAICLICLIEFDNWQDKIIAVIITIGS
+ AYIIALVLNRFLSTKIRILGGVFDLLSGPLLIIGAIACIAFLNPWPIKIIGMFLWVVI
+ IFCLPTFINRDKE"
+ gene 3042250..3042729
+ /locus_tag="SARI_03127"
+ CDS 3042250..3042729
+ /locus_tag="SARI_03127"
+ /inference="protein motif:HMMPfam:IPR008514"
+ /inference="similar to AA sequence:REFSEQ:ZP_00978762.1"
+ /note="'KEGG: eci:UTI89_C0121 0.0053 usp; uropathogenic
+ specific protein K01150;
+ COG: COG3157 Hemolysin-coregulated protein
+ (uncharacterized);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572109.1"
+ /db_xref="GI:161504997"
+ /db_xref="InterPro:IPR008514"
+ /translation="MSNPAYLWLTDANGSPIIGSSLVTGRIGAIELKAVTHHLSIPVD
+ GNTGRLTGTRVHTPITVQKDFDKTTPLLYKALSENQTLKSATIKMYQILDAGVESEYF
+ NIILENVKVTGITPNLFPGSGTGTHSETIQLRYEAITWKHCDGNIIYKDSWNHRATA"
+ misc_feature 3042256..3042717
+ /locus_tag="SARI_03127"
+ /note="Protein of unknown function (DUF796); Region:
+ DUF796; cl01226"
+ /db_xref="CDD:242377"
+ gene complement(3042795..3044087)
+ /locus_tag="SARI_03128"
+ CDS complement(3042795..3044087)
+ /locus_tag="SARI_03128"
+ /inference="similar to AA sequence:REFSEQ:YP_049725.1"
+ /note="'COG: NOG18931 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572110.1"
+ /db_xref="GI:161504998"
+ /translation="MSESLQTNVTQALPDDREELYRLVWREPAERIASLCNISKEQLT
+ KRCAELRIPRPLAGYWKALAKGTAPAVPALPDLKSGKVVKSPRKTSQAIPLPTKISSK
+ VAAPVPRKRARTAGSGYALIEDLKTYLPVSSVTKDGYYKPTKKKLLDLNVSETGFNSA
+ IDFLSRFFAALGKQGYWVRLAEGNEGLHCQGIDIKENPKEGGLRYDSLWRPCSASIIC
+ VGDMLFAFNLAEMTEYVPAKEVNGRYIRDETMIRWMRGKYDKPFRYVIKHALPTGRFF
+ LQLYSPYSSTNWQVEFRQTKQCGLISQIPKIISAMRDAVPLIKKQLEEARVKAEARRI
+ QWELDEKRYRERDRIREEKDAYDASLAELKVIMTQWAEDKRIEQFFHEAAFDAAMLGE
+ KQKIQVMERLQLARQLLSVDTAVERLLKWQTPHEQFFK"
+ gene complement(3044174..3044434)
+ /locus_tag="SARI_03129"
+ CDS complement(3044174..3044434)
+ /locus_tag="SARI_03129"
+ /inference="protein motif:HMMPfam:IPR001387"
+ /inference="protein motif:HMMSmart:IPR001387"
+ /inference="protein motif:superfamily:IPR010982"
+ /inference="similar to AA sequence:REFSEQ:ZP_00833868.1"
+ /note="'COG: COG1396 Predicted transcriptional regulators;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572111.1"
+ /db_xref="GI:161504999"
+ /db_xref="InterPro:IPR001387"
+ /db_xref="InterPro:IPR010982"
+ /translation="MIPKRLKEARLRAKLTQEKLGVLAGIEEATAYSRLSHYENGTHK
+ PTFELVCEFARVLNVPECYFYTVDDGFADEVLKLYKHYKGQI"
+ misc_feature complement(<3044207..3044434)
+ /locus_tag="SARI_03129"
+ /note="Predicted transcriptional regulators
+ [Transcription]; Region: HipB; COG1396"
+ /db_xref="CDD:224314"
+ misc_feature complement(3044243..3044425)
+ /locus_tag="SARI_03129"
+ /note="Helix-turn-helix XRE-family like proteins.
+ Prokaryotic DNA binding proteins belonging to the
+ xenobiotic response element family of transcriptional
+ regulators; Region: HTH_XRE; cd00093"
+ /db_xref="CDD:238045"
+ misc_feature complement(order(3044315..3044317,3044402..3044404,
+ 3044414..3044416))
+ /locus_tag="SARI_03129"
+ /note="non-specific DNA binding site [nucleotide binding];
+ other site"
+ /db_xref="CDD:238045"
+ misc_feature complement(order(3044318..3044320,3044405..3044407))
+ /locus_tag="SARI_03129"
+ /note="salt bridge; other site"
+ /db_xref="CDD:238045"
+ misc_feature complement(order(3044312..3044317,3044327..3044329,
+ 3044336..3044338,3044381..3044386))
+ /locus_tag="SARI_03129"
+ /note="sequence-specific DNA binding site [nucleotide
+ binding]; other site"
+ /db_xref="CDD:238045"
+ gene complement(3044537..3044821)
+ /locus_tag="SARI_03130"
+ CDS complement(3044537..3044821)
+ /locus_tag="SARI_03130"
+ /inference="protein motif:HMMPfam:IPR001387"
+ /inference="protein motif:HMMSmart:IPR001387"
+ /inference="protein motif:superfamily:IPR010982"
+ /inference="similar to AA sequence:REFSEQ:ZP_00833868.1"
+ /note="'KEGG: reh:H16_A1411 0.0078 shikimate kinase
+ containing a XRE-type HTH DNA-binding domain K00924;
+ COG: COG1396 Predicted transcriptional regulators;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572112.1"
+ /db_xref="GI:161505000"
+ /db_xref="InterPro:IPR001387"
+ /db_xref="InterPro:IPR010982"
+ /translation="MIPKRLRIARELADMSQEDLAAAAGVSEETGSSRISHYEHGRHR
+ PKFELVCQLARVLNVPEGYFYTLDDSFAEAMLKLYAGEIVQWKKPVSEPS"
+ misc_feature complement(<3044612..3044821)
+ /locus_tag="SARI_03130"
+ /note="Predicted transcriptional regulators
+ [Transcription]; Region: HipB; COG1396"
+ /db_xref="CDD:224314"
+ misc_feature complement(3044630..3044812)
+ /locus_tag="SARI_03130"
+ /note="Helix-turn-helix XRE-family like proteins.
+ Prokaryotic DNA binding proteins belonging to the
+ xenobiotic response element family of transcriptional
+ regulators; Region: HTH_XRE; cd00093"
+ /db_xref="CDD:238045"
+ misc_feature complement(order(3044702..3044704,3044789..3044791,
+ 3044801..3044803))
+ /locus_tag="SARI_03130"
+ /note="non-specific DNA binding site [nucleotide binding];
+ other site"
+ /db_xref="CDD:238045"
+ misc_feature complement(order(3044705..3044707,3044792..3044794))
+ /locus_tag="SARI_03130"
+ /note="salt bridge; other site"
+ /db_xref="CDD:238045"
+ misc_feature complement(order(3044699..3044704,3044714..3044716,
+ 3044723..3044725,3044768..3044773))
+ /locus_tag="SARI_03130"
+ /note="sequence-specific DNA binding site [nucleotide
+ binding]; other site"
+ /db_xref="CDD:238045"
+ gene 3044952..3045212
+ /locus_tag="SARI_03131"
+ CDS 3044952..3045212
+ /locus_tag="SARI_03131"
+ /inference="protein motif:superfamily:IPR010982"
+ /inference="similar to AA sequence:INSD:AAL21635.1"
+ /note="'COG: COG3423 Predicted transcriptional regulator;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572113.1"
+ /db_xref="GI:161505001"
+ /db_xref="InterPro:IPR010982"
+ /translation="MTKQDWHPADIIAALHKRGTSMAAVSREAGLASSTLANALSRPW
+ PKGEWLIARALNVHPAKIWPSRYEEEGELRQPKNPLPVRCRL"
+ misc_feature 3044964..3045164
+ /locus_tag="SARI_03131"
+ /note="Winged helix-turn-helix DNA-binding; Region:
+ HTH_35; pfam13693"
+ /db_xref="CDD:205869"
+ gene 3045209..3045946
+ /locus_tag="SARI_03132"
+ CDS 3045209..3045946
+ /locus_tag="SARI_03132"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000595"
+ /inference="protein motif:superfamily:IPR000595"
+ /inference="similar to AA sequence:REFSEQ:ZP_01792304.1"
+ /note="'COG: COG0664 cAMP-binding proteins - catabolite
+ gene activator and regulatory subunit of cAMP-dependent
+ protein kinases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572114.1"
+ /db_xref="GI:161505002"
+ /db_xref="InterPro:IPR000595"
+ /db_xref="InterPro:IPR011991"
+ /translation="MTVADTSLNSIPPPVQIQQAAIPPPAEMPFLSAPVHNHTAFHYT
+ RFTRHALLRPIARETGSRIYLQEQPTCGFWYLNHGVIGLHHTLKNGKELLVRACQQGE
+ WFGYLGLFGTEFYHCHACVLQTASLCHVIPHSNSEFLHHYPQFAHFLLNQVVANLSDA
+ EHRMTWITRYRTRHRVLSSLWYLTSYFPGYDWTWREVAEFAGCETETALRFSKELRQA
+ GILDDSQRRLHVPHPEKLATLLAYTHS"
+ misc_feature 3045332..3045898
+ /locus_tag="SARI_03132"
+ /note="cAMP-binding proteins - catabolite gene activator
+ and regulatory subunit of cAMP-dependent protein kinases
+ [Signal transduction mechanisms]; Region: Crp; COG0664"
+ /db_xref="CDD:223736"
+ misc_feature <3045386..3045658
+ /locus_tag="SARI_03132"
+ /note="effector domain of the CAP family of transcription
+ factors; members include CAP (or cAMP receptor protein
+ (CRP)), which binds cAMP, FNR (fumarate and nitrate
+ reduction), which uses an iron-sulfur cluster to sense
+ oxygen) and CooA, a heme containing CO...; Region: CAP_ED;
+ cd00038"
+ /db_xref="CDD:237999"
+ misc_feature order(3045521..3045526,3045551..3045559)
+ /locus_tag="SARI_03132"
+ /note="ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:237999"
+ misc_feature order(3045617..3045625,3045635..3045643)
+ /locus_tag="SARI_03132"
+ /note="flexible hinge region; other site"
+ /db_xref="CDD:237999"
+ gene 3046050..3047474
+ /locus_tag="SARI_03133"
+ CDS 3046050..3047474
+ /locus_tag="SARI_03133"
+ /inference="protein motif:FPrintScan:IPR001525"
+ /inference="protein motif:HMMPanther:IPR001525"
+ /inference="protein motif:HMMPfam:IPR001525"
+ /inference="protein motif:HMMTigr:IPR001525"
+ /inference="protein motif:ScanRegExp:IPR001525"
+ /inference="similar to AA sequence:INSD:ABG56846.1"
+ /note="'KEGG: plu:plu0338 2.1e-193 dcm; DNA-cytosine
+ methyltransferase K00558;
+ COG: COG0270 Site-specific DNA methylase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA cytosine methylase"
+ /protein_id="YP_001572115.1"
+ /db_xref="GI:161505003"
+ /db_xref="InterPro:IPR001525"
+ /translation="MSEFDLFAQELLEKAEAEEKQQQERDRKLIDRVLEIYDQKYVAE
+ LLRKIGKNEWSRETLNRWINGKCEPKSLTMAEEALLRKMLPEQPAHHPDYDFRFIDLF
+ AGIGGIRKGFEAIGGQCVFTSEWNKEAVRTYKANWYNDEDAHTFNLDIREVTLSGEEG
+ ISEEKAYAHIDQHIPDHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFECEAQGTLFFDV
+ ARIIKAKQPAIFVLENVKNLKSHDKGKTFKVIMDTLDELGYEVADASITGKDDPKIID
+ GKNFLPQHRERIVLVGFRRDLNIHQGFTLKNIHKFYPEKRPTFGQLLDPAVDSKYILS
+ PKLWEYLYNYAKKHAAKGNGFGFGLVDPNNENSVARTLSARYHKDGSEILIDRGWDKE
+ LGEIDFSNPENQEQRPRRLTPHECARLMGFEQPGGKPFRIPVSDTQAYRQFGNSVVVP
+ VFEAVAKLLQPYIMKAAAIKATQK"
+ misc_feature 3046122..3047471
+ /locus_tag="SARI_03133"
+ /note="DNA cytosine methylase; Provisional; Region:
+ PRK10458"
+ /db_xref="CDD:236696"
+ misc_feature 3046335..3047429
+ /locus_tag="SARI_03133"
+ /note="Cytosine-C5 specific DNA methylases; Methyl
+ transfer reactions play an important role in many aspects
+ of biology. Cytosine-specific DNA methylases are found
+ both in prokaryotes and eukaryotes. DNA methylation, or
+ the covalent addition of a methyl group...; Region:
+ Cyt_C5_DNA_methylase; cd00315"
+ /db_xref="CDD:238192"
+ misc_feature order(3046353..3046370,3046416..3046427,3046488..3046490,
+ 3046494..3046502,3046596..3046598,3046602..3046604)
+ /locus_tag="SARI_03133"
+ /note="cofactor binding site; other site"
+ /db_xref="CDD:238192"
+ misc_feature order(3046596..3046598,3046605..3046610,3046617..3046628,
+ 3046635..3046637,3046680..3046682,3046746..3046748,
+ 3046752..3046757,3046902..3046904,3046908..3046910,
+ 3047019..3047021,3047046..3047048,3047157..3047162,
+ 3047166..3047171,3047382..3047384)
+ /locus_tag="SARI_03133"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:238192"
+ misc_feature order(3046596..3046598,3046605..3046607,3046617..3046619,
+ 3046746..3046748,3046752..3046754,3046902..3046904,
+ 3046908..3046910,3047382..3047384)
+ /locus_tag="SARI_03133"
+ /note="substrate interaction site [chemical binding];
+ other site"
+ /db_xref="CDD:238192"
+ gene complement(3047525..3048727)
+ /locus_tag="SARI_03134"
+ CDS complement(3047525..3048727)
+ /locus_tag="SARI_03134"
+ /inference="similar to AA sequence:INSD:ABG49222.1"
+ /note="'KEGG: nme:NMB1289 4.5e-49 type II restriction
+ enzyme, putative K01155;
+ COG: NOG14036 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572116.1"
+ /db_xref="GI:161505004"
+ /db_xref="REBASE:StyAZORF3133P"
+ /translation="MMSGLHSWLLDKSTSDTYMFIKRLSANDTGATGGHQVGIYIPSG
+ IVEHLFPSINHTRDLNPSVTLNAHTSSHSCPDTEARAVYYNGRFFGKTRNEKRITRWG
+ GGKNPLQNPENTGALALLAFDHRQGADSQFVDIWVCHDAEEEDIVESSLGEIVPGSLV
+ YGPANEILGGLALKEPVSSEYRLPEEWRTHFPSGKEIIEYAAAHYSPNVVGPDKQLIE
+ RRRVEYEIFLLVEEMHVLGMVQSGFDSVNEFIALANSVSNRRKSRAGKSLELHLEQLF
+ NEHGLTTFETQAVTEGNKKPDFLFPSAQAYHDETFPEQKLRMLAVKTTCKDRWRQILN
+ EADRIQDIYLFTLQEGVSVAQFQEMQQERVRLVVPNSLHDKYPKTIREYLISLETFID
+ ETKALYVD"
+ misc_feature complement(3048242..3048676)
+ /locus_tag="SARI_03134"
+ /note="N-terminal domain of type IIE restriction
+ endonuclease EcoRII and similar proteins; Region:
+ EcoRII_N; cd10016"
+ /db_xref="CDD:197382"
+ misc_feature complement(order(3048251..3048253,3048257..3048259,
+ 3048419..3048424,3048428..3048433,3048437..3048439,
+ 3048443..3048445,3048449..3048454,3048470..3048472,
+ 3048476..3048478,3048488..3048490,3048548..3048550,
+ 3048602..3048604,3048608..3048610,3048617..3048628,
+ 3048632..3048634,3048647..3048655,3048662..3048664))
+ /locus_tag="SARI_03134"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:197382"
+ misc_feature complement(3047555..3048049)
+ /locus_tag="SARI_03134"
+ /note="EcoRII C terminal; Region: EcoRII-C; pfam09019"
+ /db_xref="CDD:149925"
+ gene complement(3048825..3049976)
+ /locus_tag="SARI_03135"
+ CDS complement(3048825..3049976)
+ /locus_tag="SARI_03135"
+ /inference="protein motif:HMMPfam:IPR007197"
+ /inference="similar to AA sequence:INSD:AAL20212.1"
+ /note="'KEGG: syg:sync_2368 3.4e-13 arylsulfatase
+ regulator;
+ COG: COG0641 Arylsulfatase regulator (Fe-S
+ oxidoreductase);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572117.1"
+ /db_xref="GI:161505005"
+ /db_xref="InterPro:IPR007197"
+ /translation="MKHVFHLMAKPAGWRCNLACDYCFYLAKGQGVLRDTCGQRHMSD
+ KVLEAYVRQYIAASDGPEVNFTWQGGEPTLAGLEFYRRAVALQQRYAGDKRITNSLQT
+ NGVLINDEWAAFLAQHRFLVGISLDGPAHLHNHYRKTGSGKPVFDQVMAALEILKRHR
+ VDVNILTVVNNVTAQAPLDIYRLLTREVGAEFLQFIPVVEYDAQCGLLPWSVTGEDYG
+ RFMIAIFDEWVRHDVVRVFVQLFDNTLAAWLGERPALCVMQPTCGRGLVVEQNGDIYS
+ CDHYVDAEHRLGNLLQQPLEKLVVGKAQRRFGQQKAQLPDDCHRCPWRFACQGGCPKH
+ RLHDRLNHLCAGYRMMFSHMDPYMTYMAQQIRLQQSPAGVMSVVDSLKQ"
+ misc_feature complement(3048885..3049961)
+ /locus_tag="SARI_03135"
+ /note="anaerobic sulfatase-maturating enzyme; Region:
+ sulfatase_rSAM; TIGR03942"
+ /db_xref="CDD:188457"
+ misc_feature complement(3049308..3049934)
+ /locus_tag="SARI_03135"
+ /note="Radical SAM superfamily. Enzymes of this family
+ generate radicals by combining a 4Fe-4S cluster and
+ S-adenosylmethionine (SAM) in close proximity. They are
+ characterized by a conserved CxxxCxxC motif, which
+ coordinates the conserved iron-sulfur cluster; Region:
+ Radical_SAM; cd01335"
+ /db_xref="CDD:100105"
+ misc_feature complement(order(3049383..3049388,3049476..3049478,
+ 3049602..3049604,3049668..3049676,3049764..3049769,
+ 3049779..3049781,3049905..3049913,3049917..3049919,
+ 3049923..3049925,3049929..3049931))
+ /locus_tag="SARI_03135"
+ /note="FeS/SAM binding site; other site"
+ /db_xref="CDD:100105"
+ misc_feature complement(3048963..3049193)
+ /locus_tag="SARI_03135"
+ /note="radical SAM additional 4Fe4S-binding SPASM domain;
+ Region: rSAM_more_4Fe4S; TIGR04085"
+ /db_xref="CDD:234461"
+ gene complement(3049973..3050773)
+ /locus_tag="SARI_03136"
+ CDS complement(3049973..3050773)
+ /locus_tag="SARI_03136"
+ /inference="protein motif:HMMPfam:IPR002781"
+ /inference="similar to AA sequence:REFSEQ:NP_245533.1"
+ /note="'COG: COG0730 Predicted permeases;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572118.1"
+ /db_xref="GI:161505006"
+ /db_xref="InterPro:IPR002781"
+ /translation="MTAWMIAALCGCGLATSLLSALFGVGGSILLVPVLHLLFPQCAV
+ QVLAATSLTVVMLSALINVCAFWRQGIRLNSRLLVLWSLGMATGMQAGVYASFLLSDK
+ VLLMLFALVLVGLALRCGYSRQTTQENVQPDNRTRSTGMLLCTAGGAVAGLTGLGGGS
+ VLAPLMSQLSGIPRQHIAVYCNWMMVFGSAGTVVSYLYRTAPDTGALPPSMQFGYVNM
+ AIVAVIFLCTLVFQPVSMRLRTLLPECWLHRVFSGVLLMIATLILVTL"
+ misc_feature complement(3049982..3050773)
+ /locus_tag="SARI_03136"
+ /note="Predicted permeases [General function prediction
+ only]; Region: COG0730"
+ /db_xref="CDD:223802"
+ gene complement(3050777..3052069)
+ /locus_tag="SARI_03137"
+ CDS complement(3050777..3052069)
+ /locus_tag="SARI_03137"
+ /inference="protein motif:HMMPfam:IPR000917"
+ /inference="protein motif:ScanRegExp:IPR000917"
+ /inference="protein motif:ScanRegExp:IPR002345"
+ /inference="similar to AA sequence:REFSEQ:NP_246621.1"
+ /note="'KEGG: pmu:PM1682 8.0e-107 putative sulfatase;
+ COG: COG3119 Arylsulfatase A and related enzymes;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572119.1"
+ /db_xref="GI:161505007"
+ /db_xref="InterPro:IPR000917"
+ /db_xref="InterPro:IPR002345"
+ /translation="MQPNILVFFTDQQRWDTVGCYNPVVSTTPVLDQLAREGVKFENA
+ FTVQPVCGPARSCLQTGRYPTQNGCYRNNIAMRQDEVTLAKLFNQAGYDTAYIGKWHL
+ ADLDEKPVLEALRGGWQYWLAADALEHTSHPYGGHFFDNDNQPVHFDGYRVDDQTTFA
+ LDYLKNRQRDNPFLLFLSYLEPHFQNDMARFVAPDGYAERFQTASVPPDLINRPGDWP
+ QNLPDYYGMCQNLDENLGRIVDYLKSSGEYDNTIILFFSDHGCHFRTRNDEYKRSCHE
+ SSIRIPCVARGGPFSGGRTVEHLVTLLDIPVTMLSAAGITVPDAMVGRDLQTALDAGH
+ WDEEVLIQISESEVGRALRTTRWKYEIVAPGSDPWNESAATIYVESQLYDLLNDPWER
+ QNLIASPEHARIRDKLRQDIGRKMTAIGEDLPVIVPVE"
+ misc_feature complement(3050840..3052069)
+ /locus_tag="SARI_03137"
+ /note="Sulfatase; Region: Sulfatase; cl17466"
+ /db_xref="CDD:248020"
+ misc_feature complement(3050822..3052066)
+ /locus_tag="SARI_03137"
+ /note="Arylsulfatase A and related enzymes [Inorganic ion
+ transport and metabolism]; Region: AslA; COG3119"
+ /db_xref="CDD:225661"
+ gene complement(3052083..3053483)
+ /locus_tag="SARI_03138"
+ CDS complement(3052083..3053483)
+ /locus_tag="SARI_03138"
+ /inference="protein motif:FPrintScan:IPR000576"
+ /inference="protein motif:HMMPfam:IPR000576"
+ /inference="protein motif:HMMTigr:IPR000576"
+ /inference="similar to AA sequence:INSD:BAA19154.1"
+ /note="'KEGG: eci:UTI89_C3355 5.3e-07 nupG; transport of
+ nucleosides, permease protein K03289;
+ COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572120.1"
+ /db_xref="GI:161505008"
+ /db_xref="InterPro:IPR000576"
+ /translation="MRKKSLPLRINKAAINCVSVHANFLWRYDNGYKQVFRCSLFSIG
+ RYSDSEGIMAIQRDTKWNVILWGFFFLFYYYNWSSCFLFLPMWLTRMVGLDKTHIGMV
+ FSSFAVAAICLQPLLGWVTDKLGPKKYLLWLIVILMVLFAPFFIYVYTPLLQSHFAIG
+ LVAGGLYLGFIFHAGYGAVEAFVEKVSRNRGFEYGRPRLFGCFGSAACATISGILYGF
+ DPTWIYWIGSALALLLVVILLVARSEPLPGIEAEQVRQQKVSVLELFKLRRFWYFTLY
+ VLGVACIYDVFDQQFINFFTRFFDHQEQAARAFGYITTAGNLGDAAVMFFIPLLINKY
+ IGSKNALLITGTIMTIRIVGSSFATGPIEVLFLRMLHNFEVPFLLIGIFKYIADVFDT
+ RLSGTIYLVGVMFIKQSAAIVLSTVAGHLYDTIGFHSAYLILGSITAAFTLLSAFLLT
+ STPRQKTADARTPATL"
+ misc_feature complement(3052173..3053300)
+ /locus_tag="SARI_03138"
+ /note="galactoside permease; Reviewed; Region: lacY;
+ PRK09528"
+ /db_xref="CDD:236549"
+ misc_feature complement(3052173..3053297)
+ /locus_tag="SARI_03138"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature complement(order(3052251..3052253,3052260..3052265,
+ 3052272..3052277,3052287..3052292,3052323..3052325,
+ 3052332..3052337,3052347..3052349,3052356..3052361,
+ 3052368..3052370,3052512..3052514,3052524..3052526,
+ 3052533..3052535,3052545..3052547,3052566..3052568,
+ 3052608..3052610,3052617..3052622,3052629..3052634,
+ 3052641..3052643,3052869..3052871,3052887..3052892,
+ 3052899..3052904,3052944..3052946,3052953..3052958,
+ 3052965..3052970,3052977..3052982,3053130..3053135,
+ 3053139..3053144,3053154..3053156,3053163..3053168,
+ 3053175..3053177,3053229..3053234,3053238..3053246,
+ 3053253..3053255))
+ /locus_tag="SARI_03138"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene 3053707..3056751
+ /locus_tag="SARI_03139"
+ CDS 3053707..3056751
+ /locus_tag="SARI_03139"
+ /inference="protein motif:HMMPanther:IPR007781"
+ /inference="protein motif:HMMPfam:IPR000421"
+ /inference="protein motif:HMMPfam:IPR007781"
+ /inference="protein motif:superfamily:IPR008979"
+ /inference="similar to AA sequence:REFSEQ:NP_561782.1"
+ /note="'KEGG: mmu:27419 1.8e-86 Naglu;
+ alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)
+ K01205;
+ COG: NOG36584 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572121.1"
+ /db_xref="GI:161505009"
+ /db_xref="InterPro:IPR000421"
+ /db_xref="InterPro:IPR007781"
+ /db_xref="InterPro:IPR008979"
+ /translation="MDAQGNNVSQPLLDNNPATQWQSKLDYNRWLEMDLKGTYQLSEL
+ QLATPLNTLTRFEVYSSEDGVTYHKITSAKSGKPNERLPLNVRASRLRINITDYSAGT
+ KGVVNDISLLGDKISDTAPMPPAIRVADYAATEWAKCHERRQNAAYRQQEVVSEAQEL
+ VERVLGAQYQNRFIFAIVPSTTGKDSFTVKAADGKISISGPNGISLASGLNWYLKNYL
+ HVNYDPLNVSSLTIPTNWPMPKGVTEKATPYQYKYALNFCTPSYTMAFWRWHDYEKFL
+ DWAAMNGVNLMLDIVGQEEVQRRMLHQFGYSDNDVRQYLPGPAYFGWFYMANMQSFGG
+ PLPQSWFAQRTELARKIHDRMEVYGITPVFPGFAGQVPDTFAAKNPQAQVIDQGDWVG
+ FVRPPMLRTYVKQGEDYFSKVADVYYQTLKTTFGDISHYYAVDPFYEGGNRADLNMVK
+ VAQTVQNKMLEHDKDAVWIIQNWQENPTDAFLNGLKKDHALILDLYADNKPNHAIRHE
+ FSNTPWIWNMLHAFGGRMGFSGMPEVLAQEIPQSLAESKYMKGVGVTAESLGTNPMLY
+ EMLYDMAWEKSPISSTAYIHNWLTSRYGAQSPEIEQAWDIMVKTAYHRRKDRQRAEDS
+ IIDAKPGFGVTRACTYYNALIDYDKAEFEKILPLYLSVYDRFKDNPAYQHDLVDITRQ
+ VLANASYEYYRAFEDAWMAQDYSAFNQLSGKFLRLIKLQDKVLSTRPEFMLGNWINNS
+ RTMLDGMDDWTRDQFEFNARAMVTTWGTEQAADAGLRDYSNRQWQGLTGDFYYQRWAT
+ WIQALKTAAATGQKQDAIKVSWFPLEYRWVNQTGNGYPTQPSGRDIRQLAQQALAEFS
+ VTSEDLRPYRQSKDKRNLALNKPVFTHGDIINAEFSTERVVDGQSSTLWGNKTWPADL
+ IIDLQGVQKVDGIELEFEQTAEDMRNPVVSGWTVEIQDAQGNWRTIQDKSKDFSQKQV
+ VNAVPYKGEAQKVRITLTGADFKLRPDLKPQLAEVRVLAATQ"
+ misc_feature 3053740..3054021
+ /locus_tag="SARI_03139"
+ /note="F5/8 type C domain; Region: F5_F8_type_C;
+ pfam00754"
+ /db_xref="CDD:216100"
+ misc_feature 3054166..3054423
+ /locus_tag="SARI_03139"
+ /note="Alpha-N-acetylglucosaminidase (NAGLU) N-terminal
+ domain; Region: NAGLU_N; pfam12971"
+ /db_xref="CDD:193444"
+ misc_feature 3054463..3055440
+ /locus_tag="SARI_03139"
+ /note="Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel
+ domain; Region: NAGLU; pfam05089"
+ /db_xref="CDD:218423"
+ misc_feature 3055453..3056229
+ /locus_tag="SARI_03139"
+ /note="Alpha-N-acetylglucosaminidase (NAGLU) C-terminal
+ domain; Region: NAGLU_C; pfam12972"
+ /db_xref="CDD:221877"
+ misc_feature 3056386..3056676
+ /locus_tag="SARI_03139"
+ /note="F5/8 type C domain; Region: F5_F8_type_C;
+ pfam00754"
+ /db_xref="CDD:216100"
+ gene 3056774..3057823
+ /locus_tag="SARI_03140"
+ CDS 3056774..3057823
+ /locus_tag="SARI_03140"
+ /inference="similar to AA sequence:REFSEQ:ZP_00718224.1"
+ /note="'Psort location: extracellular, including cell
+ wall, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572122.1"
+ /db_xref="GI:161505010"
+ /translation="MPVFAAFSLSARNFMNRNTLLCALPLLASGIGLPVIAADIDTDD
+ IQQKVDTGLDQTPASKPWKVRAGLLIETENKEGQSFDKDGFFEPTLWMDFSRDRWTFY
+ GSYYQETHGTNYSDGFSRDNWFNQYEFDARYLMVDQKDLALGMTFHFRNYTFIYQDNP
+ EKTQSGGYNSQRWSFQPDWRINFTDKFKSTGWVTVYNWYNNLHENGLANRELKGEGGF
+ EYRFNPTIAVRLNYFIDRGWNTNSDDQTGEFCRSQLRPYIPITFSLFDAGPTTITPYG
+ RWTLDVWSQNASRNQRMHTTETRTGIFIEQKLSPHLSMTLDYAYEVQARHDLSPGDKP
+ IVKFHKTGLGFIYSF"
+ misc_feature 3056957..3057820
+ /locus_tag="SARI_03140"
+ /note="Outer membrane protein G (OmpG); Region:
+ Porin_OmpG; pfam09381"
+ /db_xref="CDD:204222"
+ gene 3057838..3059214
+ /locus_tag="SARI_03141"
+ CDS 3057838..3059214
+ /locus_tag="SARI_03141"
+ /inference="protein motif:Gene3D:IPR013320"
+ /inference="protein motif:HMMPfam:IPR000757"
+ /inference="protein motif:superfamily:IPR008979"
+ /inference="protein motif:superfamily:IPR008985"
+ /inference="similar to AA sequence:REFSEQ:YP_695565.1"
+ /note="'KEGG: sru:SRU_2844 2.9e-08 beta-glucanase
+ precursor K01216;
+ COG: COG2273 Beta-glucanase/Beta-glucan synthetase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572123.1"
+ /db_xref="GI:161505011"
+ /db_xref="InterPro:IPR000757"
+ /db_xref="InterPro:IPR008979"
+ /db_xref="InterPro:IPR008985"
+ /db_xref="InterPro:IPR013320"
+ /translation="MSTPILPFLPDNADWIYQPDLSDEFNGPDLDPRWCPYYQASWGD
+ LDASRARYRFITESDGTVSLELYVDNAGQGYWQPWRASNNTYKVAGITGGARDYMNQW
+ PSGGFPITNHMPYYDAFATRYGYFEIRTRFLSGSGLAPAFWFLGMQDAAYTENMEVDS
+ PEVFTLENVVKFNLLPRQGMQQVSIPTPYGEGTELPDLEDGYHIYGLEWDPEYLKLYI
+ DGQLVSTIEAAIDYRMFPLISLNHHETNNAEVGNIYDNDPPLPNDETFTIDYYRVFKK
+ ADTPADPWPNYQNPLLPGYNIAERAFINIYGYDGDNSTLREGKLNDGDHFSVADTYPK
+ GSGTEEENERWYNDQFRYIYIEWHQPVDFDTLVLYATQAQSTAPQNIRIEVSADGYDD
+ WTVVKPDFDLDWQTDDPGIAEGLKITLDTPLQQNQHARIVINTAPESYALSEIEIGTQ
+ INATTRFK"
+ misc_feature 3057904..3058659
+ /locus_tag="SARI_03141"
+ /note="glycosyl hydrolase family 16; Region:
+ Glyco_hydrolase_16; cd00413"
+ /db_xref="CDD:185683"
+ misc_feature order(3058252..3058254,3058258..3058260,3058264..3058266,
+ 3058306..3058308,3058312..3058314,3058321..3058323,
+ 3058348..3058350,3058354..3058356,3058402..3058404,
+ 3058552..3058554,3058558..3058560)
+ /locus_tag="SARI_03141"
+ /note="active site"
+ /db_xref="CDD:185683"
+ misc_feature order(3058306..3058308,3058312..3058314,3058321..3058323)
+ /locus_tag="SARI_03141"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:185683"
+ gene 3059588..3060268
+ /locus_tag="SARI_03142"
+ CDS 3059588..3060268
+ /locus_tag="SARI_03142"
+ /inference="protein motif:HMMPfam:IPR011092"
+ /inference="similar to AA sequence:REFSEQ:ZP_00348157.1"
+ /note="'COG: NOG06091 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572124.1"
+ /db_xref="GI:161505012"
+ /db_xref="InterPro:IPR011092"
+ /translation="MSPLSSPLPGIAEAGGDTNPRAVGQHSKIRFKNADAIGFPAGDV
+ LANFFAQFGYVCAPSSQPFLPYFLSTLDALAWRSGVPEMFYPEALTPGLREVSKDGDM
+ WGNIYPRAGALSQTHDYKAGAVIAQRAADLVTRSGQSHVYIPLAATSHDGYWPPDLVT
+ EGDSNNHQWQMLVPKKSASCAIFPDGSSTDSYADKLAEDGAYVWTLWRPYKCCPRRGQ
+ TFLGSSGG"
+ misc_feature <3059588..3060262
+ /locus_tag="SARI_03142"
+ /note="TraU protein; Region: TraU; cl06067"
+ /db_xref="CDD:244288"
+ gene 3060271..3061638
+ /locus_tag="SARI_03143"
+ CDS 3060271..3061638
+ /locus_tag="SARI_03143"
+ /inference="similar to AA sequence:REFSEQ:ZP_01786926.1"
+ /note="'COG: NOG06092 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572125.1"
+ /db_xref="GI:161505013"
+ /translation="MRSAWCLLFVTFLAPAADKYQYQQQGAISDWMYYRIGGGAAIPP
+ SATRRNTFPLTAGVSWNSDMMCGNFDIDTTVRNQLNGVTDGFQQLMGEVIESATSAVA
+ SLPAMVIQRANPQLYDLLTNGVLQGRLDFDKSLLSCQKMAGKMTDYALGPAWTQSAQA
+ ENYQGIAASEKDAVRADQRAAEEAAEKGKRWVGGEHRGGKGQPPIKLVRDTTVAGYNI
+ LNNRSATSTSSVSSNDCQGELCQVWSKPDDAAQWLTRVVGEQTINVAPDNDQSGDTSQ
+ QSGAQSGVGLTPLIQEEQDKIQPLIIDMVNRSQPVNDDTLAQASGGELHLTRGVIEAL
+ RDDPDAAVLIQRLSGELALSRVMEQALMARRTLLAGMREPNISGEKEAQTALTQTTAQ
+ LDQELSQLKLELDMRQALADNAALTILERQTMRAKTKGRAVGVEDDADKRVADLSKPT
+ GGDTQ"
+ misc_feature 3060355..3061617
+ /locus_tag="SARI_03143"
+ /note="integrating conjugative element protein, PFL_4711
+ family; Region: conj_TIGR03755"
+ /db_xref="CDD:234345"
+ gene 3061635..3061892
+ /locus_tag="SARI_03144"
+ CDS 3061635..3061892
+ /locus_tag="SARI_03144"
+ /note="'Psort location: extracellular, including cell
+ wall, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572126.1"
+ /db_xref="GI:161505014"
+ /translation="MKRLMLSGIMLLVCSAVVFNLASGNTPQINRSDLLLWRVTLYGV
+ ICGVGWHLYDCLPPHRPAIRRIALIFIVLIVLNEIVPEVLR"
+ gene 3061889..3063370
+ /locus_tag="SARI_03145"
+ CDS 3061889..3063370
+ /locus_tag="SARI_03145"
+ /inference="similar to AA sequence:REFSEQ:NP_928415.1"
+ /note="'COG: NOG06088 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572127.1"
+ /db_xref="GI:161505015"
+ /translation="MTTNSYLEYFLTLLGWVVNNGLWNAISANGLFALPLLIKLLALW
+ LQARSQGADEGNKAALSLVWTEHLMYTSLLVIMFTCVPMLNIDLDTIKYDTTRSKQCG
+ WSVPQPADTGYQPIINELGDKTAAVPVWWYFIHVISKGITSATVATLPCQPDLRQIRF
+ EVQHTRIKDPALAQELRDFVEECYAPSRARLKFRAGELDDDTSDDTAWLGSSYFLNTA
+ GYYDTDHALSPHSAWPYSASRDAGLTDTGAGGYPTCKQWWADDTVGLKARLLQLPAPD
+ IWTAFKKIGQSQAVYEEAVLRSLVSERNMQVSQDGRVYPGYGGNVDGTLTNAATRLAS
+ TAGNIIGSAVAFPAFDSVRQALPMVQALLQMALVICIPLITLCSAWDVKAVMTLTFVQ
+ FAMFFITFWWELARWLDSRLLGVLYSSDTHSSWNLAGIQNSQDDVIINLVMGSMFLVL
+ PTFWLGAMTWAGVRVGVAVNGALTGGVKVAQDSGGKAGGIIGR"
+ misc_feature 3061910..3063268
+ /locus_tag="SARI_03145"
+ /note="TraG-like protein, N-terminal region; Region:
+ TraG_N; pfam07916"
+ /db_xref="CDD:219640"
+ gene complement(3063844..3065424)
+ /locus_tag="SARI_03146"
+ CDS complement(3063844..3065424)
+ /locus_tag="SARI_03146"
+ /inference="protein motif:FPrintScan:IPR002296"
+ /inference="protein motif:HMMPfam:IPR011639"
+ /inference="protein motif:ScanRegExp:IPR002052"
+ /inference="similar to AA sequence:REFSEQ:ZP_01354492.1"
+ /note="'KEGG: cac:CAC3534 1.0e-51 site-specific
+ modification DNA-methyltransferase K07317;
+ COG: COG0827 Adenine-specific DNA methylase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572128.1"
+ /db_xref="GI:161505016"
+ /db_xref="InterPro:IPR002052"
+ /db_xref="InterPro:IPR002296"
+ /db_xref="InterPro:IPR011639"
+ /translation="MSKEFGVFYTPKFLIDFIINKLPIKNIKKQSVNVLEPSAGDGRF
+ IDHLLRKNPRIVVDASLVEINKESASLLEDKFINQEKIRVINSDFLYYESIKKFDVIV
+ GNPPYISKKHLTRNQIERCREILSAASIPSLADKNIWTSFIVRCTSMLEDNGVMALVL
+ PFDLLQVKFGSYIQSYLTSNFSRIEIYTSNKLAFDMAEQDTIILLAFKNSKRKGLFLN
+ DLEFDKNKKNKLLHHAADKCRRLISQDENIKWSSLTLSDYELNFLTRLAGKLKSIGSY
+ ATSRPGIVTAANSFFIVSKRKIEEYSLQKYVSPIIQKSQFFQNNIVFNESDFNELVNS
+ NKPSYFIDLSGYIKNSSERVEDYLKLGESLELHKRYKCQRRKNWYVVPKVPPGEGFFF
+ KRCNEYPKLHKNNFEILTTDAAYNLVVNEGYNIESLIYSFYNPLTLCFAELYGRYYGG
+ GVLELVPNEFRRLPIPYKEISSQLFLDFSNKFKNKANIDEILLSSGRDVLSDIIEEHE
+ FIEIIKIYKKLIQRRLKS"
+ misc_feature complement(3065050..3065328)
+ /locus_tag="SARI_03146"
+ /note="S-adenosylmethionine-dependent methyltransferases
+ (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
+ that use S-adenosyl-L-methionine (SAM or AdoMet) as a
+ substrate for methyltransfer, creating the product
+ S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
+ cd02440"
+ /db_xref="CDD:100107"
+ misc_feature complement(order(3065113..3065115,3065158..3065166,
+ 3065233..3065238,3065296..3065316))
+ /locus_tag="SARI_03146"
+ /note="S-adenosylmethionine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:100107"
+ gene complement(3065430..3066029)
+ /locus_tag="SARI_03147"
+ CDS complement(3065430..3066029)
+ /locus_tag="SARI_03147"
+ /inference="protein motif:HMMPfam:IPR002711"
+ /inference="protein motif:HMMSmart:IPR003615"
+ /inference="similar to AA sequence:INSD:EAY29202.1"
+ /note="'KEGG: mba:Mbar_A3242 0.0029 DNA-(apurinic or
+ apyrimidinic site) lyase K01142;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572129.1"
+ /db_xref="GI:161505017"
+ /db_xref="InterPro:IPR002711"
+ /db_xref="InterPro:IPR003615"
+ /translation="MFPLRKNNPKRTKQQKLSKYNLYKAALSKDFFCCCGYCGTHHVY
+ YGSGKCFHIDHFAPKSKFKHLENEYSNLVYSCPTCNIAKSNDWCGPTENERIFNNVGY
+ IEPCDEVYATSFYRDSSGKIKYQEGNLAAKYMYHKLKFGLKRHEIFWLADYFYELVPR
+ ISKKLRETPESNPLYDELKKLLLDSIEQMDKYRQLQREL"
+ misc_feature complement(3065778..3065933)
+ /locus_tag="SARI_03147"
+ /note="HNH nucleases; HNH endonuclease signature which is
+ found in viral, prokaryotic, and eukaryotic proteins. The
+ alignment includes members of the large group of homing
+ endonucleases, yeast intron 1 protein, MutS, as well as
+ bacterial colicins, pyocins, and...; Region: HNHc;
+ cd00085"
+ /db_xref="CDD:238038"
+ misc_feature complement(order(3065778..3065780,3065790..3065792,
+ 3065799..3065804,3065814..3065819,3065856..3065858,
+ 3065862..3065870,3065874..3065876))
+ /locus_tag="SARI_03147"
+ /note="active site"
+ /db_xref="CDD:238038"
+ gene complement(3066007..3066660)
+ /locus_tag="SARI_03148"
+ CDS complement(3066007..3066660)
+ /locus_tag="SARI_03148"
+ /inference="protein motif:superfamily:IPR011006"
+ /inference="similar to AA sequence:REFSEQ:ZP_01689820.1"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572130.1"
+ /db_xref="GI:161505018"
+ /db_xref="InterPro:IPR011006"
+ /translation="MNKFRMGYLDEDESDIARFYDFIKKYDIYEFIDFKPKPSIEELI
+ DEINSSNLDILVIDFQINEYVNINYNGVRVFDSIRNKRKNFPCIILTSFADDAISESF
+ DTHIVYSKSIPFGCDTESKKLFELKIRKSIEHYISELQKASDEFAKLTSLTSLTLDQE
+ NRLVELDEFLESSLNNDVKIPKHLKTSQHIGNIKELINRAEDILEKMDTLYVPAEKK"
+ gene complement(3066675..3069269)
+ /locus_tag="SARI_03149"
+ CDS complement(3066675..3069269)
+ /locus_tag="SARI_03149"
+ /inference="protein motif:Gene3D:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003594"
+ /inference="protein motif:HMMSmart:IPR003594"
+ /inference="protein motif:superfamily:IPR003594"
+ /inference="similar to AA sequence:INSD:EAY29200.1"
+ /note="'KEGG: azo:azo0358 4.8e-29 putative two-component
+ sensor kinase;
+ COG: COG4191 Signal transduction histidine kinase
+ regulating C4-dicarboxylate transport system;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572131.1"
+ /db_xref="GI:161505019"
+ /db_xref="InterPro:IPR003594"
+ /translation="MTNNKEFVNFNVSARTARLIGRENVATSDGAIIELVKNTYDADS
+ KYCIVYFDIPYSTLPQIIQEGDFNELLKHALSINLELRDFYIQNKITFEWEIRKYSLP
+ QGATSDEVEQFKKDRAGESETLRGFFGALTNIYIIDNGEGMSAETIKKNWMTIGTDNK
+ TYEIKSKGGRTKSGAKGIGRFALDRLGRLCVLKTTTENSNGVIWKVDWDSFEQNGKNI
+ NEIYATLETPDTDNNMDALSILGPEIVEEIKAGLKKRKNPLDLEKTLSTGTIIKISSV
+ RDHWNDLAIKNLKDRLESLVPPSEDTSFQLFLFCSNTAKYNGLLQPEICEDYDYKLEV
+ NLDKKLNLSGRVIRNEFRLEDIPSEFFQSDDTKDLKDKIKLLDFPLSELMPGISDMES
+ SKTGPFSFTLYFMKRTVPNKTDTEKYYQKKIDTNSRSLWLDSYGGIKLFRDNFRVRPY
+ GERGSSSWDWLELGNRVALNPAQVSRHRHWKVSPNNITGVINISRIENPYLEDKSSRE
+ GVQENDSFLFFKNIIEKLIKIFEDDRSYFFSELLKFNQKKSTLPSEDEISKRDIEKAT
+ QIANEIYQQYKSKNDGSKRKSKKTDNETIATVYLKEKEEKEGLAKELTEMREENSLLR
+ VFASSGVTIASFTHELENLQIKLGSRFDEIKQLIAPLIDEASLSNIYKYDNPYYRLDL
+ FEKEDKKLKQWLQYTLRTIRKDKRNQQNINIADYLENFKTEWSDTLDERCVNLTLQNK
+ STDYRLKSFEIDLDCIFNNLLINSLDVFIRNEVSSECRNIEISTEKLSDGFHIRYEDS
+ GPGLSKDIVNAQDIFQATYTTKRDKYGKEIGTGMGMWLVKKSLEQYNASCTILPGTSG
+ FSLEIIFP"
+ misc_feature complement(3068622..>3068876)
+ /locus_tag="SARI_03149"
+ /note="Histidine kinase-, DNA gyrase B-, and HSP90-like
+ ATPase; Region: HATPase_c_3; pfam13589"
+ /db_xref="CDD:222246"
+ misc_feature complement(3066720..3067004)
+ /locus_tag="SARI_03149"
+ /note="Histidine kinase-like ATPases; This family includes
+ several ATP-binding proteins for example: histidine
+ kinase, DNA gyrase B, topoisomerases, heat shock protein
+ HSP90, phytochrome-like ATPases and DNA mismatch repair
+ proteins; Region: HATPase_c; cd00075"
+ /db_xref="CDD:238030"
+ misc_feature complement(order(3066720..3066722,3066768..3066779,
+ 3066864..3066869,3066873..3066875,3066879..3066881,
+ 3066885..3066887,3066972..3066974,3066981..3066983,
+ 3066993..3066995))
+ /locus_tag="SARI_03149"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature complement(3066981..3066983)
+ /locus_tag="SARI_03149"
+ /note="Mg2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature complement(order(3066771..3066773,3066777..3066779,
+ 3066867..3066869,3066873..3066875))
+ /locus_tag="SARI_03149"
+ /note="G-X-G motif; other site"
+ /db_xref="CDD:238030"
+ gene 3070634..3071506
+ /locus_tag="SARI_03150"
+ CDS 3070634..3071506
+ /locus_tag="SARI_03150"
+ /inference="similar to AA sequence:REFSEQ:NP_931500.1"
+ /note="'COG: COG3440 Predicted restriction endonuclease;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572132.1"
+ /db_xref="GI:161505020"
+ /translation="MISLEALQSAISNVSVWRQGDVCAPHKPLLLLYVLSQYKAGHPR
+ LFNYGLEIHEPLTRLLKEFGPKRRTDYPNMPFWRLRTDGFWEIANAEGCKPRRGNTQP
+ TKKELIDNQVVGGFDEAAYQQLLTHPEVIDQLAQQILIDRFPESIQRILANQLGLDFI
+ DRSKNRDPRFRDIVLRAYHSRCAFCGYDLRLDGALVGIEAAHIHWKTYGGPCVVNNGL
+ ALCSLHHDAFDMGAFGLDENLTIRISGGVSRSPVVDNLFWQRNGQPLHLPHDKSLWPT
+ EQYVGWHRKQIFKA"
+ misc_feature 3070634..3071497
+ /locus_tag="SARI_03150"
+ /note="Predicted restriction endonuclease [Defense
+ mechanisms]; Region: COG3440"
+ /db_xref="CDD:225973"
+ misc_feature 3071177..3071341
+ /locus_tag="SARI_03150"
+ /note="HNH endonuclease; Region: HNH_2; pfam13391"
+ /db_xref="CDD:222096"
+ gene 3071809..3072162
+ /locus_tag="SARI_03151"
+ CDS 3071809..3072162
+ /locus_tag="SARI_03151"
+ /note="'COG: NOG18549 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572133.1"
+ /db_xref="GI:161505021"
+ /translation="MQGIPPCRAVFLCFHHWRNTMPTSSCPEAKSLSLSVSSEAWEKV
+ VSFPPDPSQEDDRLENLIVATILTFKSAGPDRKSINFGLYCLPSDGSSTVPLMTPLRL
+ TLEDDHLLVTALHTS"
+ gene 3072248..3073159
+ /locus_tag="SARI_03152"
+ CDS 3072248..3073159
+ /locus_tag="SARI_03152"
+ /inference="protein motif:HMMPfam:IPR013610"
+ /inference="similar to AA sequence:REFSEQ:ZP_01498176.1"
+ /note="'KEGG: vfi:VFB02 6.0e-54 traC; DNA primase TraC;
+ COG: COG4227 Antirestriction protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572134.1"
+ /db_xref="GI:161505022"
+ /db_xref="InterPro:IPR013610"
+ /translation="MNRSNDLYQKVTDEIIAALEKGVIPWVRPWREGEPVVPMNALSG
+ RFYHGINIPLLWNSAERQGYESDRWLTFTQIRNAGGNIRKGEKSTLAVFYLPQQREVV
+ DSNGNTVLDADGNPKLTSYAVVREFRLFNIQQCEDLPEAFSQPVVMVDDPIAAAEQVA
+ RQSAVVITHRRQNRAYYSPGRDCIIMPHPEQFASREDYYGTLLHELTHATGHASRLNR
+ DGITAGKHTFGDPTYSFEELIAEMGAAFLCAHVGIQAKLQHDSYIASWLKVLQQNKKA
+ IFRASGLARNACEYLLERAQQPLALSA"
+ misc_feature 3072257..3072637
+ /locus_tag="SARI_03152"
+ /note="Domain of unknown function (DUF1738); Region:
+ DUF1738; pfam08401"
+ /db_xref="CDD:219822"
+ misc_feature 3072263..3073123
+ /locus_tag="SARI_03152"
+ /note="Antirestriction protein [DNA replication,
+ recombination, and repair]; Region: COG4227"
+ /db_xref="CDD:226680"
+ gene 3073338..3074957
+ /locus_tag="SARI_03153"
+ CDS 3073338..3074957
+ /locus_tag="SARI_03153"
+ /inference="protein motif:HMMPfam:IPR011093"
+ /inference="protein motif:HMMPfam:IPR011119"
+ /inference="protein motif:HMMSmart:IPR003607"
+ /inference="similar to AA sequence:REFSEQ:YP_985545.1"
+ /note="'COG: NOG08745 non supervised orthologous group;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572135.1"
+ /db_xref="GI:161505023"
+ /db_xref="InterPro:IPR003607"
+ /db_xref="InterPro:IPR011093"
+ /db_xref="InterPro:IPR011119"
+ /translation="MRIWLTRKKQNTTPSTGEPDVTEGWLHPESAQTLLAETTRQQLI
+ HFIRQSTALPASLFERFWLTPLHRFAELAQLFPASENHHHSHAGGLLDHSLEAACYAA
+ RLRQSYLFPPDAALEDQAAQSERWTTVIIYAALLHDLGKLITDIEVEDASGQRWFPWQ
+ GPLTQPYRFRYLPQRDYLRHPAAAALLLTQLLPPESLDWLAADSVALSTLLHCLNGQY
+ QYAGLAGELVQKADRASVAFNLGGDPVKAIHRPQTSLPQQIITALRDLLANEFRLNNP
+ NGGSDGWITEEALWLVSKNAADAVRGWLLRQGIDAVPQHNVRLFDEMQAHQLLIPCED
+ KAIWHCRIEASGGWSSELTLLRFSPSLIWEDPQQRPATFSGTVTPIAGVQNETEAVIA
+ TDAVVEQLSPQPEQNDALLSGEAFWQWLVRNVQAQHLEVNEPNARIHTVAGSVFLVTP
+ GIFKLWLSTCGQNVPEEYWREVQKKFQNLNLHRKQKNGLNIWHCAVVGPRRCSRLKGY
+ LLDDPTPLFGDDVPFNNPHLLLSEGEDTHDF"
+ misc_feature 3073404..3074057
+ /locus_tag="SARI_03153"
+ /note="integrating conjugative element relaxase, PFL_4751
+ family; Region: ICE_TraI_Pfluor; TIGR03760"
+ /db_xref="CDD:163472"
+ misc_feature 3073407..3074351
+ /locus_tag="SARI_03153"
+ /note="Putative helicase; Region: TraI_2; pfam07514"
+ /db_xref="CDD:219442"
+ misc_feature 3074622..3074927
+ /locus_tag="SARI_03153"
+ /note="Protein of unknown function (DUF1528); Region:
+ DUF1528; pfam07515"
+ /db_xref="CDD:219443"
+ gene 3074947..3075873
+ /locus_tag="SARI_03154"
+ CDS 3074947..3075873
+ /locus_tag="SARI_03154"
+ /inference="protein motif:Gene3D:IPR013762"
+ /inference="protein motif:HMMPfam:IPR002104"
+ /inference="protein motif:superfamily:IPR010998"
+ /inference="protein motif:superfamily:IPR011010"
+ /inference="similar to AA sequence:REFSEQ:NP_928358.1"
+ /note="'COG: COG0582 Integrase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572136.1"
+ /db_xref="GI:161505024"
+ /db_xref="InterPro:IPR002104"
+ /db_xref="InterPro:IPR010998"
+ /db_xref="InterPro:IPR011010"
+ /db_xref="InterPro:IPR013762"
+ /translation="MTFEQLLEEYFFARLLRPDTQSCYCTAVNQFTHWRNVLPAEVTP
+ HMVLEWRHYLLNVRCIKPVSWNHYMRHMRALYNFAIEQGLLEQFINPFQKTSLRESRK
+ KKKTLTREQILASRKVLNQFIEREKIQRSYRSPLYPAWFWLTVVETFNYTAIRLNQLI
+ HLRVRDIDLVHDTLFIQSEGSKSHDEHIVPIASRLRPYLEQMLEEAKTKGIRADDQLF
+ NINRFSRRTLRQGKPMTENQVSYFFAKLSDACHSRFSSHRYRHTVATELMQKPEQNLY
+ VTQKLLGHRDIKVTLSYIEHNVEMLRSCVERD"
+ misc_feature 3074956..3075867
+ /locus_tag="SARI_03154"
+ /note="tyrosine recombinase XerD; Region: recomb_XerD;
+ TIGR02225"
+ /db_xref="CDD:233789"
+ misc_feature 3074962..3075198
+ /locus_tag="SARI_03154"
+ /note="Phage integrase, N-terminal SAM-like domain;
+ Region: Phage_integr_N2; pfam13495"
+ /db_xref="CDD:222176"
+ misc_feature 3075349..3075828
+ /locus_tag="SARI_03154"
+ /note="DNA breaking-rejoining enzymes,
+ intergrase/recombinases, C-terminal catalytic domain. The
+ tyrosine recombinase/integrase family share the same
+ catalytic domain containing six conserved active site
+ residues. The best-studied members of this diverse
+ family...; Region: INT_REC_C; cd01182"
+ /db_xref="CDD:238587"
+ misc_feature order(3075409..3075411,3075715..3075717,3075724..3075726,
+ 3075796..3075798,3075823..3075825)
+ /locus_tag="SARI_03154"
+ /note="active site"
+ /db_xref="CDD:238587"
+ misc_feature order(3075409..3075411,3075724..3075726,3075823..3075825)
+ /locus_tag="SARI_03154"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:238587"
+ misc_feature order(3075409..3075414,3075490..3075492,3075712..3075717,
+ 3075823..3075825)
+ /locus_tag="SARI_03154"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:238587"
+ misc_feature order(3075409..3075411,3075490..3075492,3075715..3075717,
+ 3075724..3075726,3075796..3075798,3075823..3075825)
+ /locus_tag="SARI_03154"
+ /note="Int/Topo IB signature motif; other site"
+ /db_xref="CDD:238587"
+ gene complement(3075848..3075973)
+ /locus_tag="SARI_03155"
+ CDS complement(3075848..3075973)
+ /locus_tag="SARI_03155"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572137.1"
+ /db_xref="GI:161505025"
+ /translation="MKLDVDGNYKMAASPAFFVYKASGRIFSLTPCFVNLSPRNF"
+ gene complement(3076026..3076107)
+ /locus_tag="SARI_03156"
+ tRNA complement(3076026..3076107)
+ /locus_tag="SARI_03156"
+ /product="tRNA-Leu"
+ gene 3076329..3077348
+ /locus_tag="SARI_03157"
+ CDS 3076329..3077348
+ /locus_tag="SARI_03157"
+ /inference="protein motif:HMMPanther:IPR002085"
+ /inference="protein motif:HMMPfam:IPR013149"
+ /inference="protein motif:HMMPfam:IPR013154"
+ /inference="protein motif:ScanRegExp:IPR002328"
+ /inference="protein motif:ScanRegExp:IPR006140"
+ /inference="protein motif:superfamily:IPR011032"
+ /inference="similar to AA sequence:INSD:AAL23305.1"
+ /note="'KEGG: eci:UTI89_C4876 1.4e-166 yjgB; putative
+ oxidoreductase K00100;
+ COG: COG1064 Zn-dependent alcohol dehydrogenases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572138.1"
+ /db_xref="GI:161505026"
+ /db_xref="InterPro:IPR002085"
+ /db_xref="InterPro:IPR002328"
+ /db_xref="InterPro:IPR006140"
+ /db_xref="InterPro:IPR011032"
+ /db_xref="InterPro:IPR013149"
+ /db_xref="InterPro:IPR013154"
+ /translation="MTIIKSYAAKEAGGELELYEYDAGELQPEDVEVRVDYCGICHSD
+ LSMIDNEWGFSQYPLVAGHEVIGRVTALGSAAQNKGFKVGQHVGIGWTARSCGHCDAC
+ IRGNQINCLEGSVPTILNRGGFAEKLRAGWQWVIPLPEDIDMASAGPLLCGGITVFKP
+ LLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNRSKEQEVLAMGADKVVN
+ SRDPEALKALAGQFDLIINTVNVDLDWQPYFEALAYGGNFHTVGAVLKPLPVPAFTLI
+ AGDRSISGSATGTPYELRKLMKFAGRSNVAPTTELFAMSQINEAIQHVRDGKARYRVV
+ LKADF"
+ misc_feature 3076329..3077345
+ /locus_tag="SARI_03157"
+ /note="Zn-dependent alcohol dehydrogenases [General
+ function prediction only]; Region: AdhP; COG1064"
+ /db_xref="CDD:223992"
+ misc_feature 3076341..3077336
+ /locus_tag="SARI_03157"
+ /note="Cinnamyl alcohol dehydrogenases (CAD); Region:
+ CAD1; cd05283"
+ /db_xref="CDD:176186"
+ misc_feature order(3076449..3076457,3076464..3076466,3076782..3076784,
+ 3076794..3076796,3076854..3076871,3076923..3076928,
+ 3076938..3076940,3076983..3076985,3077040..3077045,
+ 3077049..3077051,3077109..3077114,3077181..3077189)
+ /locus_tag="SARI_03157"
+ /note="putative NAD(P) binding site [chemical binding];
+ other site"
+ /db_xref="CDD:176186"
+ misc_feature order(3076449..3076451,3076455..3076457,3076515..3076517,
+ 3076599..3076601,3076782..3076784,3077187..3077189)
+ /locus_tag="SARI_03157"
+ /note="putative substrate binding site [chemical binding];
+ other site"
+ /db_xref="CDD:176186"
+ misc_feature order(3076449..3076451,3076515..3076517,3076782..3076784)
+ /locus_tag="SARI_03157"
+ /note="catalytic Zn binding site [ion binding]; other
+ site"
+ /db_xref="CDD:176186"
+ misc_feature order(3076614..3076616,3076623..3076625,3076632..3076634,
+ 3076656..3076658)
+ /locus_tag="SARI_03157"
+ /note="structural Zn binding site [ion binding]; other
+ site"
+ /db_xref="CDD:176186"
+ misc_feature order(3076653..3076655,3076803..3076805,3076815..3076817,
+ 3077091..3077093,3077106..3077114,3077118..3077120,
+ 3077145..3077147,3077151..3077156,3077163..3077186)
+ /locus_tag="SARI_03157"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:176186"
+ gene complement(3077376..3077924)
+ /gene="idnK"
+ /locus_tag="SARI_03158"
+ CDS complement(3077376..3077924)
+ /gene="idnK"
+ /locus_tag="SARI_03158"
+ /inference="protein motif:HMMPfam:IPR000623"
+ /inference="protein motif:HMMTigr:IPR006001"
+ /inference="similar to AA sequence:REFSEQ:NP_463345.1"
+ /note="'KEGG: stm:STM4485 3.1e-82 idnK; thermosensitive
+ D-gluconate kinase K00851;
+ COG: COG3265 Gluconate kinase;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="D-gluconate kinase"
+ /protein_id="YP_001572139.1"
+ /db_xref="GI:161505027"
+ /db_xref="InterPro:IPR000623"
+ /db_xref="InterPro:IPR006001"
+ /translation="MTQRYLNGWGSYILMGVSGSGKSLIGCKIAALFSAKFIDGDDLH
+ SAKNIDKMSQGIPLTDEDRLPWLERLNDASYSLYKKNETGFIVCSSLKKQYRDILRKS
+ SPNVHFLWLDGDYDTILERMHCRAGHFMPPDLQQSQFDALERPCADEHDIARIDVNHD
+ IENVTEQCLQAVQAFRLALSAS"
+ misc_feature complement(3077454..3077891)
+ /gene="idnK"
+ /locus_tag="SARI_03158"
+ /note="Gluconate kinase (GntK) catalyzes the phosphoryl
+ transfer from ATP to gluconate. The resulting product
+ gluconate-6-phoshate is an important precursor of
+ gluconate metabolism. GntK acts as a dimmer composed of
+ two identical subunits; Region: GntK; cd02021"
+ /db_xref="CDD:238979"
+ misc_feature complement(order(3077550..3077552,3077562..3077564,
+ 3077802..3077804,3077808..3077810,3077856..3077879))
+ /gene="idnK"
+ /locus_tag="SARI_03158"
+ /note="ATP-binding site [chemical binding]; other site"
+ /db_xref="CDD:238979"
+ misc_feature complement(order(3077550..3077552,3077868..3077873))
+ /gene="idnK"
+ /locus_tag="SARI_03158"
+ /note="Gluconate-6-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:238979"
+ misc_feature complement(3077406..3077870)
+ /gene="idnK"
+ /locus_tag="SARI_03158"
+ /note="Shikimate kinase; Region: SKI; pfam01202"
+ /db_xref="CDD:216360"
+ gene 3078321..3078638
+ /locus_tag="SARI_03159"
+ CDS 3078321..3078638
+ /locus_tag="SARI_03159"
+ /inference="protein motif:HMMPfam:IPR013149"
+ /inference="protein motif:superfamily:IPR011032"
+ /inference="similar to AA sequence:REFSEQ:YP_153330.1"
+ /note="'KEGG: spt:SPA4284 6.3e-43 idnD; L-idonate
+ 5-dehydrogenase K00098;
+ COG: COG1063 Threonine dehydrogenase and related
+ Zn-dependent dehydrogenases;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572140.1"
+ /db_xref="GI:161505028"
+ /db_xref="InterPro:IPR011032"
+ /db_xref="InterPro:IPR013149"
+ /translation="MRFFGNTMYFPHVDGGFTQFKTIDTAQYIPSPQQADEKVMAFAE
+ PLAVAIHAAHEAGDLQGKRVFISGVGPIGCLIVSAVKTLGAAEVACADISARALSGPA
+ DGR"
+ misc_feature <3078321..>3078617
+ /locus_tag="SARI_03159"
+ /note="Medium chain reductase/dehydrogenase
+ (MDR)/zinc-dependent alcohol dehydrogenase-like family;
+ Region: MDR; cl16912"
+ /db_xref="CDD:247637"
+ gene 3078780..3079514
+ /locus_tag="SARI_03160"
+ CDS 3078780..3079514
+ /locus_tag="SARI_03160"
+ /inference="protein motif:HMMPanther:IPR002347"
+ /inference="protein motif:HMMPfam:IPR002198"
+ /inference="protein motif:HMMPfam:IPR003474"
+ /inference="similar to AA sequence:REFSEQ:YP_153328.1"
+ /note="'KEGG: stm:STM4483 2.3e-38 idnO;
+ 5-keto-D-gluconate-5-reductase K00046;
+ COG: COG2610 H+/gluconate symporter and related permeases;
+ Psort location: vacuolar, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572141.1"
+ /db_xref="GI:161505029"
+ /db_xref="InterPro:IPR002198"
+ /db_xref="InterPro:IPR002347"
+ /db_xref="InterPro:IPR003474"
+ /translation="MLATGLGRYGASIIVNDITPERAEKAVMKLQQEGIKAIAAPFNV
+ THNQDIETAVEHIEKDIGAIDVLINNAGIRRRHPFTEFPEQEWRRHRRKSNCGFSRLS
+ SRHAPYGGASGRKSNQHLFSEEEMPPFWNSIFAAVIPVILMAIAAVCEITLPKTNAIR
+ VFFEFIGNPAVALFIAIIIAIFTLGRRNGRTVEQVIDIVGESIGAIAVILFIIPGGGA
+ FKQVLVDSGVGQYISQLMTGTSHLLY"
+ misc_feature 3078783..>3079043
+ /locus_tag="SARI_03160"
+ /note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
+ NADB_Rossmann; cl09931"
+ /db_xref="CDD:245206"
+ misc_feature <3079128..>3079499
+ /locus_tag="SARI_03160"
+ /note="fructuronate transporter; Provisional; Region:
+ PRK10034; cl15264"
+ /db_xref="CDD:246912"
+ gene 3079514..3080140
+ /locus_tag="SARI_03161"
+ CDS 3079514..3080140
+ /locus_tag="SARI_03161"
+ /inference="protein motif:HMMPfam:IPR003474"
+ /inference="similar to AA sequence:INSD:CAD06941.1"
+ /note="'KEGG: eci:UTI89_C3106 0.00045 ygbN; hypothetical
+ permease YgbN K03299;
+ COG: COG1609 Transcriptional regulators;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572142.1"
+ /db_xref="GI:161505030"
+ /db_xref="InterPro:IPR003474"
+ /translation="MCWTVAAVLRIALGSATVAAVTTAGVVLPIINVTHADPALVVLA
+ TGAGSVIASHVNDPGFWLFNLGSKDDIRDEQRYHSYCDAMTRRGLAPLRINPRAISSI
+ HLGIQLMRDALAARPDVDGVFCTNDDIAMGALLWCWERQLAVPEQISIAGFHGLEMGG
+ QMIPSLASVIPPAFRSGAAQMLLNKIKNNDLNHNTIGLGYQIYHGNTL"
+ misc_feature <3079514..3079702
+ /locus_tag="SARI_03161"
+ /note="fructuronate transporter; Provisional; Region:
+ PRK10034; cl15264"
+ /db_xref="CDD:246912"
+ misc_feature <3079718..3080134
+ /locus_tag="SARI_03161"
+ /note="Type 1 periplasmic binding fold superfamily;
+ Region: Periplasmic_Binding_Protein_Type_1; cl10011"
+ /db_xref="CDD:245225"
+ gene 3080218..3081720
+ /locus_tag="SARI_03162"
+ CDS 3080218..3081720
+ /locus_tag="SARI_03162"
+ /inference="protein motif:HMMPfam:IPR008571"
+ /inference="similar to AA sequence:REFSEQ:ZP_00702240.1"
+ /note="'KEGG: reh:H16_A0917 4.3e-163 predicted ATPase
+ K01529;
+ COG: COG0433 Predicted ATPase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572143.1"
+ /db_xref="GI:161505031"
+ /db_xref="InterPro:IPR008571"
+ /translation="MSAPLLIARTPETELFLLPGMANRHGLITGATGTGKTVTLQKMA
+ ESLSGIGVPVFMADVKGDLTGVAQEGLASEKLLARLKSIGVSDWQPHASPVTLWDIFG
+ EKGHPLRATVSDLGPLLLARLLNLNEVQSGVLNIIFRIADDQGLLLLDFKDLRAITQY
+ IGDNAKSFQNQYGNISSASVGAIQRGLLTLEQQGAGHFFGEPMLDIHDWMRTDASGNG
+ IINILSAEKLYQMPKLYAASLLWMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAP
+ QILLDKIEQVIRLIRSKGVGVWFVSQNPSDIPDSVLGQLGNRVQHALRAFTPKDQKAV
+ KTAAQTMRANPAFDTEKAIQELGTGEALISFLDAKGSPSMVERAMVIAPCSRMGPVTE
+ DECNGLINHSALYGKYEDDVDRESAYEMLQKCVQATTEKQNAPAAKGKEAAVDNGILG
+ GLKDILFGSTGPRGGKHDGVVQSVAKSAARQVTHQIIRGMLGSLLGGRRR"
+ misc_feature 3080224..3081675
+ /locus_tag="SARI_03162"
+ /note="Bacterial protein of unknown function (DUF853);
+ Region: DUF853; pfam05872"
+ /db_xref="CDD:218788"
+ misc_feature 3080290..>3080433
+ /locus_tag="SARI_03162"
+ /note="FtsK/SpoIIIE family; Region: FtsK_SpoIIIE;
+ pfam01580"
+ /db_xref="CDD:216584"
+ gene complement(3081820..3082902)
+ /locus_tag="SARI_03163"
+ CDS complement(3081820..3082902)
+ /locus_tag="SARI_03163"
+ /inference="protein motif:HMMPfam:IPR005495"
+ /inference="similar to AA sequence:INSD:AAV80014.1"
+ /note="'COG: COG0795 Predicted permeases;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572144.1"
+ /db_xref="GI:161505032"
+ /db_xref="InterPro:IPR005495"
+ /translation="MQPFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ
+ GNYDALGAGMYTLLSVPKDIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQV
+ ALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNF
+ VYIERVKGDEELAGISIYAFNDQRRLQSVRYAASAKFDPEHKVWRLSQVDESDLQNPK
+ QITGSQTVSGTWKTDLTPDKLGVVALDPDALSISGLHNYVKYLKSSGQDAGRYQLNMW
+ SKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYG
+ IPPIVGALLPSASFFLISLWLMLRKS"
+ misc_feature complement(3081826..3082893)
+ /locus_tag="SARI_03163"
+ /note="lipopolysaccharide ABC transporter permease;
+ Provisional; Region: PRK15071"
+ /db_xref="CDD:237900"
+ misc_feature complement(3081829..3082878)
+ /locus_tag="SARI_03163"
+ /note="Predicted permease YjgP/YjgQ family; Region:
+ YjgP_YjgQ; pfam03739"
+ /db_xref="CDD:217705"
+ gene complement(3082902..3084002)
+ /locus_tag="SARI_03165"
+ CDS complement(3082902..3084002)
+ /locus_tag="SARI_03165"
+ /inference="protein motif:HMMPfam:IPR005495"
+ /inference="similar to AA sequence:INSD:CAD06939.1"
+ /note="'COG: COG0795 Predicted permeases;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572145.1"
+ /db_xref="GI:161505034"
+ /db_xref="InterPro:IPR005495"
+ /translation="MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIP
+ ANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAA
+ MVLALFTGILAAVNVMWAGPWSSKHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLF
+ IESVDGSDFHDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNKGTRFEGTAL
+ LRDFRITDFQNYQAIIGHQAVALDPNDTDQMDMRTLWNTDSDRARAELHWRITLVFTV
+ FMMALMVVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSIKSNGGKGKLDPVIWMWTV
+ NLIYLALAIGLNLWDTVPVRRLRARFLRKGAV"
+ misc_feature complement(3082905..3084002)
+ /locus_tag="SARI_03165"
+ /note="lipopolysaccharide ABC transporter permease LptF;
+ Provisional; Region: PRK15120"
+ /db_xref="CDD:185075"
+ misc_feature complement(3082968..3083990)
+ /locus_tag="SARI_03165"
+ /note="Predicted permease YjgP/YjgQ family; Region:
+ YjgP_YjgQ; pfam03739"
+ /db_xref="CDD:217705"
+ gene 3083916..3084044
+ /locus_tag="SARI_03164"
+ CDS 3083916..3084044
+ /locus_tag="SARI_03164"
+ /inference="similar to AA sequence:REFSEQ:YP_543802.1"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572146.1"
+ /db_xref="GI:161505033"
+ /translation="MTKEDQKQDEEYRQLAFERLPHQISYDYHFKYARKNPFFAGI"
+ gene 3084395..3085906
+ /locus_tag="SARI_03166"
+ CDS 3084395..3085906
+ /locus_tag="SARI_03166"
+ /inference="protein motif:HMMPfam:IPR000819"
+ /inference="protein motif:HMMPfam:IPR008283"
+ /inference="protein motif:HMMPIR:IPR011356"
+ /inference="protein motif:ScanRegExp:IPR000819"
+ /inference="similar to AA sequence:INSD:AAX68239.1"
+ /note="catalyzes the removal of N-terminal amino acids
+ preferably leucine from various peptides"
+ /codon_start=1
+ /transl_table=11
+ /product="leucyl aminopeptidase"
+ /protein_id="YP_001572147.1"
+ /db_xref="GI:161505035"
+ /db_xref="InterPro:IPR000819"
+ /db_xref="InterPro:IPR008283"
+ /db_xref="InterPro:IPR011356"
+ /translation="MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYIS
+ ALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLND
+ TGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFN
+ VPTRRELTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKKV
+ ITRVIGEQQMRELGMNAYLAVGHGSQNESLMSVIEYKGNPSEDARPIVLVGKGLTFDS
+ GGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRP
+ GDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHI
+ TGLMSNHNPLAHELLGASEQAGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITA
+ GCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRPVALLSQFLLNRAGFNGEE"
+ misc_feature 3084395..3085879
+ /locus_tag="SARI_03166"
+ /note="multifunctional aminopeptidase A; Provisional;
+ Region: PRK00913"
+ /db_xref="CDD:234863"
+ misc_feature 3084437..3085873
+ /locus_tag="SARI_03166"
+ /note="Cytosol aminopeptidase family, N-terminal and
+ catalytic domains. Family M17 contains zinc- and
+ manganese-dependent exopeptidases ( EC 3.4.11.1),
+ including leucine aminopeptidase. They catalyze removal of
+ amino acids from the N-terminus of a protein and...;
+ Region: Peptidase_M17; cd00433"
+ /db_xref="CDD:238247"
+ misc_feature order(3084539..3084544,3084581..3084583,3084608..3084610,
+ 3084653..3084655,3084968..3084970,3084974..3084982,
+ 3085118..3085120,3085124..3085126,3085214..3085216,
+ 3085232..3085234,3085247..3085249,3085256..3085258,
+ 3085265..3085270,3085364..3085366,3085370..3085381,
+ 3085385..3085387,3085391..3085405,3085421..3085423,
+ 3085427..3085429,3085439..3085441,3085547..3085561,
+ 3085568..3085570,3085646..3085651,3085655..3085657,
+ 3085670..3085672,3085676..3085681,3085694..3085696,
+ 3085700..3085702,3085727..3085732,3085736..3085738,
+ 3085829..3085831)
+ /locus_tag="SARI_03166"
+ /note="interface (dimer of trimers) [polypeptide binding];
+ other site"
+ /db_xref="CDD:238247"
+ misc_feature order(3085202..3085204,3085217..3085219,3085238..3085240,
+ 3085271..3085273,3085448..3085450,3085454..3085456,
+ 3085460..3085462,3085532..3085534)
+ /locus_tag="SARI_03166"
+ /note="Substrate-binding/catalytic site; other site"
+ /db_xref="CDD:238247"
+ misc_feature order(3085202..3085204,3085217..3085219,3085271..3085273,
+ 3085448..3085450,3085454..3085456)
+ /locus_tag="SARI_03166"
+ /note="Zn-binding sites [ion binding]; other site"
+ /db_xref="CDD:238247"
+ gene 3086099..3086542
+ /locus_tag="SARI_03167"
+ CDS 3086099..3086542
+ /locus_tag="SARI_03167"
+ /inference="protein motif:HMMPfam:IPR007459"
+ /inference="similar to AA sequence:INSD:CAD06937.1"
+ /note="binds to single-strand binding (SSB) protein and
+ acts as a bridge between the DnaX clamp loader complex and
+ the SSB"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA polymerase III subunit chi"
+ /protein_id="YP_001572148.1"
+ /db_xref="GI:161505036"
+ /db_xref="InterPro:IPR007459"
+ /translation="MKNATFYILDNDTAVDGLSAVEQLVCDIAAERWRSGKRVLIACE
+ DEQQAIRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRNSSPRDILISLRTN
+ FADFATAFTEVVDFVPYEETLKQLARERYKAYRVAGFNLNTATWK"
+ misc_feature 3086099..3086539
+ /locus_tag="SARI_03167"
+ /note="DNA polymerase III subunit chi; Validated; Region:
+ PRK05728"
+ /db_xref="CDD:235581"
+ gene 3086542..3089397
+ /gene="valS"
+ /locus_tag="SARI_03168"
+ CDS 3086542..3089397
+ /gene="valS"
+ /locus_tag="SARI_03168"
+ /inference="protein motif:HMMPfam:IPR002300"
+ /inference="protein motif:HMMPfam:IPR013155"
+ /inference="protein motif:HMMTigr:IPR002303"
+ /inference="protein motif:ScanRegExp:IPR001412"
+ /inference="protein motif:superfamily:IPR009008"
+ /inference="protein motif:superfamily:IPR009080"
+ /inference="protein motif:superfamily:IPR010978"
+ /note="valine--tRNA ligase; ValRS; converts valine ATP and
+ tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I
+ aminoacyl-tRNA synthetase type 1 subfamily; has a
+ posttransfer editing process to hydrolyze mischarged
+ Thr-tRNA(Val) which is done by the editing domain"
+ /codon_start=1
+ /transl_table=11
+ /product="valyl-tRNA synthetase"
+ /protein_id="YP_001572149.1"
+ /db_xref="GI:161505037"
+ /db_xref="InterPro:IPR001412"
+ /db_xref="InterPro:IPR002300"
+ /db_xref="InterPro:IPR002303"
+ /db_xref="InterPro:IPR009008"
+ /db_xref="InterPro:IPR009080"
+ /db_xref="InterPro:IPR010978"
+ /db_xref="InterPro:IPR013155"
+ /translation="MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESKESFCIMIPPPNV
+ TGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTR
+ HDYGRDAFIDKIWQWKAESGGTITHQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRL
+ YKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYKLADGAKTADGKDYLV
+ VATTRPETLLGDTGVAVNPEDPRYKDLIGKFVILPLVNRRIPIVGDEHADMEKGTGCV
+ KITPAHDFNDYDVGKRHALPMINILTFDGDIRESAEVFDTKGEESDVYSSDIPAEFQK
+ LERFAARKAVVAAVDALGLLEEIKPHDLTVPYGDRGGVVIEPMLTDQWYVRADVLAKP
+ AVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDDAGNVYVGRS
+ EDEVRQENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPENTDALRQFHPTSVMVSG
+ FDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPL
+ DMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHGTDALRFTLAALAST
+ GRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEDQDCGFNGGEMTLSLADRWILAEFN
+ QTIKAYRDALDNFRFDIAAGILYEFTWNQFCDWYLELTKPVMNGGTEEELRGTRHTLV
+ TVLESLLRLAHPIIPFITETIWQRVKVISGITADTIMLQPFPQYDASQVDEAALADTE
+ WLKQAIVAVRNIRAEMNIAPAKPLELLLRGCSQEAVRRVNDNHSFLQTLARLESITVL
+ PADDKGPVSVTKIIDGAELLIPMAGLINKDDELARLAKEVAKIEGEISRIEGKLANEG
+ FVARAPEAVIAKEREKLEGYAEAKAKLIEQQAVISAL"
+ misc_feature 3086542..3089391
+ /gene="valS"
+ /locus_tag="SARI_03168"
+ /note="valyl-tRNA synthetase; Reviewed; Region: valS;
+ PRK05729"
+ /db_xref="CDD:235582"
+ misc_feature 3086638..>3087114
+ /gene="valS"
+ /locus_tag="SARI_03168"
+ /note="catalytic core domain of valyl-tRNA synthetases;
+ Region: ValRS_core; cd00817"
+ /db_xref="CDD:185677"
+ misc_feature 3086686..3086697
+ /gene="valS"
+ /locus_tag="SARI_03168"
+ /note="HIGH motif; other site"
+ /db_xref="CDD:185677"
+ misc_feature 3087166..3087495
+ /gene="valS"
+ /locus_tag="SARI_03168"
+ /note="Leucyl-tRNA synthetase, Domain 2; Region:
+ tRNA-synt_1_2; pfam13603"
+ /db_xref="CDD:222257"
+ misc_feature <3087640..3088431
+ /gene="valS"
+ /locus_tag="SARI_03168"
+ /note="catalytic core domain of valyl-tRNA synthetases;
+ Region: ValRS_core; cd00817"
+ /db_xref="CDD:185677"
+ misc_feature order(3087967..3087969,3087976..3087978,3088060..3088065,
+ 3088069..3088074,3088084..3088086,3088171..3088182,
+ 3088204..3088206)
+ /gene="valS"
+ /locus_tag="SARI_03168"
+ /note="active site"
+ /db_xref="CDD:185677"
+ misc_feature 3088201..3088215
+ /gene="valS"
+ /locus_tag="SARI_03168"
+ /note="KMSKS motif; other site"
+ /db_xref="CDD:185677"
+ misc_feature 3088429..3088833
+ /gene="valS"
+ /locus_tag="SARI_03168"
+ /note="Anticodon-binding domain of valyl tRNA synthetases;
+ Region: Anticodon_Ia_Val; cd07962"
+ /db_xref="CDD:153416"
+ misc_feature order(3088432..3088434,3088438..3088443,3088450..3088452,
+ 3088456..3088461,3088468..3088473,3088480..3088485,
+ 3088489..3088494,3088636..3088638,3088645..3088647,
+ 3088666..3088668,3088690..3088695,3088702..3088704)
+ /gene="valS"
+ /locus_tag="SARI_03168"
+ /note="tRNA binding surface [nucleotide binding]; other
+ site"
+ /db_xref="CDD:153416"
+ misc_feature order(3088471..3088473,3088480..3088485,3088489..3088494,
+ 3088678..3088680,3088690..3088695,3088702..3088704)
+ /gene="valS"
+ /locus_tag="SARI_03168"
+ /note="anticodon binding site; other site"
+ /db_xref="CDD:153416"
+ misc_feature 3089197..3089373
+ /gene="valS"
+ /locus_tag="SARI_03168"
+ /note="Valyl tRNA synthetase tRNA binding arm; Region:
+ Val_tRNA-synt_C; pfam10458"
+ /db_xref="CDD:151031"
+ gene complement(3089459..3089968)
+ /locus_tag="SARI_03169"
+ /note="Pseudogene based on alignment with
+ gi|16767719|ref|NP_463334.1|"
+ gene 3090141..3090244
+ /locus_tag="SARI_03170"
+ ncRNA 3090141..3090244
+ /locus_tag="SARI_03170"
+ /ncRNA_class="antisense_RNA"
+ /product="RNAI"
+ /inference="nucleotide motif:Rfam:RF00106"
+ /note="Rfam score 61.34"
+ gene complement(3090318..3091073)
+ /locus_tag="SARI_03171"
+ CDS complement(3090318..3091073)
+ /locus_tag="SARI_03171"
+ /inference="similar to AA sequence:REFSEQ:ZP_00823810.1"
+ /note="'Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572150.1"
+ /db_xref="GI:161505038"
+ /translation="MLLIFLVPVLLYIGYELFLSRKLSPPADSERLTVSFRVPEGVTL
+ LPLGGLYESSECTNTNFTAGGNTYQADATTGVSLPFVSQGSGNIMSVSIAKDGGGRCR
+ WKLSRIRVHFRLSDDSPLSKGRNVFDTSYLFDFRDWGIVNTYDTGDAKNVSGNLNITA
+ DFFPMIFINHMFKEATLRLFGGDTNYDKWSRHYRLSNTKNIHLYPFVHIDKPVILESP
+ NPPPGNITALYPDGSRDDIPGIIPDYNKLLSMK"
+ gene complement(3091084..3093068)
+ /locus_tag="SARI_03172"
+ /pseudogene="unknown"
+ gene complement(3093153..3093952)
+ /locus_tag="SARI_03175"
+ /pseudogene="unknown"
+ gene 3094086..3094400
+ /locus_tag="SARI_03176"
+ CDS 3094086..3094400
+ /locus_tag="SARI_03176"
+ /inference="protein motif:HMMPfam:IPR000182"
+ /inference="similar to AA sequence:REFSEQ:NP_458891.1"
+ /note="'KEGG: stt:t4508 1.9e-50 putative acetyltransferase
+ K03828;
+ COG: COG0454 Histone acetyltransferase HPA2 and related
+ acetyltransferases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572155.1"
+ /db_xref="GI:161505043"
+ /db_xref="InterPro:IPR000182"
+ /translation="MIEQNGSVVGGGGIAPLSCSEPDICELQKMYFLPVIRGQGLAKK
+ LALMALDHAREQGFKRCYLETTAFLREAIALYKRLGFEHISEPLGCTGHIDCEVRMLK
+ IL"
+ misc_feature 3094089..3094277
+ /locus_tag="SARI_03176"
+ /note="N-Acyltransferase superfamily: Various enzymes that
+ characteristically catalyze the transfer of an acyl group
+ to a substrate; Region: NAT_SF; cd04301"
+ /db_xref="CDD:173926"
+ misc_feature order(3094173..3094181,3094209..3094214)
+ /locus_tag="SARI_03176"
+ /note="Coenzyme A binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:173926"
+ misc_feature <3094194..3094343
+ /locus_tag="SARI_03176"
+ /note="Acetyltransferases [General function prediction
+ only]; Region: RimI; COG0456"
+ /db_xref="CDD:223532"
+ gene 3094612..3094746
+ /locus_tag="SARI_03177"
+ CDS 3094612..3094746
+ /locus_tag="SARI_03177"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572156.1"
+ /db_xref="GI:161505044"
+ /translation="MSASRKMMTTSTFINSRYAPLAQAPFTRRLARRYENETRGLATR
+ "
+ gene complement(3094688..3095452)
+ /locus_tag="SARI_03178"
+ CDS complement(3094688..3095452)
+ /locus_tag="SARI_03178"
+ /inference="protein motif:HMMPfam:IPR010386"
+ /inference="protein motif:superfamily:IPR009078"
+ /inference="similar to AA sequence:REFSEQ:NP_458888.1"
+ /note="'KEGG: sty:STY4809 1.0e-131 miaE; tRNA hydroxylase
+ K06169;
+ COG: COG4445 Hydroxylase for synthesis of
+ 2-methylTHIo-cis-ribozeatin in tRNA;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572157.1"
+ /db_xref="GI:161505045"
+ /db_xref="InterPro:IPR009078"
+ /db_xref="InterPro:IPR010386"
+ /translation="MNYPQILSPVLNFLHCPTPQAWIIQAREPQNLPLLLTDHLICEL
+ KAAQTALLLVRKYVADKSGADALLACLQPYEAFAFRQGPEPDFIALHRQISKSVMPQT
+ DDPWGRQLIDRMVLLIKEELHHFWQVREVMQARNIPYVKITASRYAKGMLKAVRTHEP
+ LTLIDKLICGAYIEARSCERFAALAPWLDEDLQTFYLSLLRSEARHYQDYLALAQQIS
+ DEEISARVRYFGDVEADLILSPDREFRFHSGVPAAG"
+ misc_feature complement(3094739..3095419)
+ /locus_tag="SARI_03178"
+ /note="MiaE tRNA-modifying nonheme diiron monooxygenase,
+ ferritin-like diiron-binding domain; Region: MiaE;
+ cd07910"
+ /db_xref="CDD:153119"
+ misc_feature complement(order(3094823..3094825,3094835..3094837,
+ 3094844..3094846,3094931..3094933,3094946..3094948,
+ 3094955..3094957,3094997..3094999,3095081..3095083,
+ 3095090..3095092,3095324..3095326))
+ /locus_tag="SARI_03178"
+ /note="active site"
+ /db_xref="CDD:153119"
+ misc_feature complement(order(3094835..3094837,3094844..3094846,
+ 3094931..3094933,3095081..3095083,3095090..3095092,
+ 3095324..3095326))
+ /locus_tag="SARI_03178"
+ /note="dinuclear metal binding site [ion binding]; other
+ site"
+ /db_xref="CDD:153119"
+ misc_feature complement(order(3095075..3095080,3095087..3095089,
+ 3095096..3095098,3095105..3095110,3095117..3095119,
+ 3095291..3095293,3095300..3095302,3095321..3095323))
+ /locus_tag="SARI_03178"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:153119"
+ gene complement(3095513..3095929)
+ /locus_tag="SARI_03179"
+ CDS complement(3095513..3095929)
+ /locus_tag="SARI_03179"
+ /inference="protein motif:HMMPfam:IPR009671"
+ /inference="similar to AA sequence:INSD:AAL23289.1"
+ /note="'COG: COG3076 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572158.1"
+ /db_xref="GI:161505046"
+ /db_xref="InterPro:IPR009671"
+ /translation="MANPELLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDFE
+ TLEKAAVEAFKLGYEVTEPEELEVEEGDMVICCDILSECALNAELIDAQVEQLMNLAE
+ KYDVEYDGWGTYFEDPNGEEDDDGDYVDEDDDGVRH"
+ misc_feature complement(3095573..3095860)
+ /locus_tag="SARI_03179"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG3076"
+ /db_xref="CDD:225618"
+ misc_feature complement(3095573..3095860)
+ /locus_tag="SARI_03179"
+ /note="RNase E inhibitor protein; Provisional; Region:
+ PRK11191"
+ /db_xref="CDD:236876"
+ gene 3096095..3097099
+ /locus_tag="SARI_03180"
+ CDS 3096095..3097099
+ /locus_tag="SARI_03180"
+ /inference="protein motif:HMMPfam:IPR006131"
+ /inference="protein motif:HMMPfam:IPR006132"
+ /inference="protein motif:HMMPIR:IPR006130"
+ /inference="protein motif:HMMTigr:IPR002292"
+ /inference="protein motif:ScanRegExp:IPR006130"
+ /inference="similar to AA sequence:INSD:AAL23288.1"
+ /note="'catalyzes the formation of L-citrulline from
+ carbamoyl phosphate and L-ornithine in arginine
+ biosynthesis and degradation; E. coli K12 has two genes,
+ argF and argI, capable of producing functional ornithine
+ carbamoyltransferase. When both are active in the same
+ cell, the two gene products form a family of four hybrid
+ trimeric isoenzymes designated, FFF, FFI, FII, and III.'"
+ /codon_start=1
+ /transl_table=11
+ /product="ornithine carbamoyltransferase subunit I"
+ /protein_id="YP_001572159.1"
+ /db_xref="GI:161505047"
+ /db_xref="InterPro:IPR002292"
+ /db_xref="InterPro:IPR006130"
+ /db_xref="InterPro:IPR006131"
+ /db_xref="InterPro:IPR006132"
+ /translation="MSTFYQKPFLKLLDFTTDELTALLQLAAKLKADKKNGKEKQKLV
+ GKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGSSGSQIGHKESIKDTARVLGRMFD
+ GIQYRGYGQEIVETLAEYSGVPVWNGLTDEYHPTQLLADLLTMQEHLPGKAFNEMTLV
+ YAGDARNNMGNSMLEAAALTGLDLRLVAPKACWPQAALVTECSAMAKRNGGAITLTED
+ ITSGVKGADFIYTDVWVSMGEPKEKWAERIALLRDYQVNSQMMALTGNPQVKFLHCLP
+ AFHDDETTLGKKMAEEYGLHGGMEVTDEVFESAASIVFDEAENRMHTIKAVMVATLSK
+ "
+ misc_feature 3096095..3097096
+ /locus_tag="SARI_03180"
+ /note="ornithine carbamoyltransferase subunit I;
+ Provisional; Region: PRK03515"
+ /db_xref="CDD:179587"
+ misc_feature 3096113..3096538
+ /locus_tag="SARI_03180"
+ /note="Aspartate/ornithine carbamoyltransferase,
+ carbamoyl-P binding domain; Region: OTCace_N; pfam02729"
+ /db_xref="CDD:217204"
+ misc_feature 3096557..3097087
+ /locus_tag="SARI_03180"
+ /note="Aspartate/ornithine carbamoyltransferase, Asp/Orn
+ binding domain; Region: OTCace; pfam00185"
+ /db_xref="CDD:215776"
+ gene complement(3097105..3097398)
+ /locus_tag="SARI_03181"
+ CDS complement(3097105..3097398)
+ /locus_tag="SARI_03181"
+ /inference="protein motif:HMMPfam:IPR004375"
+ /inference="protein motif:HMMTigr:IPR004375"
+ /inference="similar to AA sequence:INSD:CAD06928.1"
+ /note="'COG: COG2731 Beta-galactosidase, beta subunit;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572160.1"
+ /db_xref="GI:161505048"
+ /db_xref="InterPro:IPR004375"
+ /translation="MIVGNIEHLEAWILTALCQAIEHIKAHVAATTAPDKYDIDSDRL
+ FYMISENMTEPGESRSAEYHARYLDIFCAGWRLAYTVLFCRLDKRHKRRHPAS"
+ misc_feature complement(<3097189..3097398)
+ /locus_tag="SARI_03181"
+ /note="Domain of unknown function (DUF386); Region:
+ DUF386; cl01047"
+ /db_xref="CDD:242269"
+ gene complement(3097472..3097633)
+ /locus_tag="SARI_03182"
+ CDS complement(3097472..3097633)
+ /locus_tag="SARI_03182"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572161.1"
+ /db_xref="GI:161505049"
+ /translation="MRWRKIDKSKGSVAVAFFVYTSILQAAAALAASYSAHLWASPFQ
+ GQRKGCSKG"
+ gene 3097888..3098067
+ /locus_tag="SARI_03183"
+ CDS 3097888..3098067
+ /locus_tag="SARI_03183"
+ /inference="protein motif:ScanRegExp:IPR003006"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572162.1"
+ /db_xref="GI:161505050"
+ /db_xref="InterPro:IPR003006"
+ /translation="MKFIIFQLVKNKTLFNAINKLLTIKNKKSYYCVVIHLMLYYFFN
+ FSDLAHILNKKNNTP"
+ gene 3098208..3099431
+ /locus_tag="SARI_03184"
+ CDS 3098208..3099431
+ /locus_tag="SARI_03184"
+ /inference="protein motif:HMMPfam:IPR003198"
+ /inference="protein motif:HMMTigr:IPR003876"
+ /inference="similar to AA sequence:SwissProt:Q8Z125"
+ /note="catalyzes the degradation of arginine to citruline
+ and ammonia"
+ /codon_start=1
+ /transl_table=11
+ /product="arginine deiminase"
+ /protein_id="YP_001572163.1"
+ /db_xref="GI:161505051"
+ /db_xref="InterPro:IPR003198"
+ /db_xref="InterPro:IPR003876"
+ /translation="MMEKHFVGSEIGQLRSVMLHRPNLSLKRLTPSNCQELLFDDVLS
+ VERAGEEHDIFANTLRQQGVEVLLLTDLLTQTLDVPDAKTWLLDTQISDYRLGPTFAA
+ DIRAWLADMSHRELARHLSGGLTYGEIPASIKNMVVDTHDINDFIMKPLPNHLFTRDT
+ SCWIYNGVSINPMAKPARQRETNNLRAIYRWHPQFADGDFIKYFGDENINYDHATLEG
+ GDVLVIGRGAVLIGMSERTTPQGIEFLAQALFKHRQAERVIAVELPKHRSCMHLDTVM
+ THIDIDAFSVYPEVVRPDVQCWTLTPDGHGGLKRTQENTLVHALEKALGIDQVRLITT
+ GGDAFEAEREQWNDANNVLTLRPGVVVGYERNIWTNEKYDKAGITVLPIPGDELGRGR
+ GGARCMSCPLERDGI"
+ misc_feature 3098208..3099428
+ /locus_tag="SARI_03184"
+ /note="arginine deiminase; Provisional; Region: PRK01388"
+ /db_xref="CDD:234949"
+ gene 3099421..3100368
+ /locus_tag="SARI_03185"
+ CDS 3099421..3100368
+ /locus_tag="SARI_03185"
+ /inference="protein motif:FPrintScan:IPR003964"
+ /inference="protein motif:Gene3D:IPR001048"
+ /inference="protein motif:HMMPfam:IPR001048"
+ /inference="protein motif:HMMPIR:IPR003964"
+ /inference="protein motif:HMMTigr:IPR003964"
+ /inference="protein motif:superfamily:IPR001048"
+ /inference="similar to AA sequence:REFSEQ:YP_219307.1"
+ /note="reversible synthesis of carbamate and ATP from
+ carbamoyl phosphate and ADP"
+ /codon_start=1
+ /transl_table=11
+ /product="carbamate kinase"
+ /protein_id="YP_001572164.1"
+ /db_xref="GI:161505052"
+ /db_xref="InterPro:IPR001048"
+ /db_xref="InterPro:IPR003964"
+ /translation="MVFKGDVMENKRTLVVALGGNALLKRGEPLEADIQRKNIELAAK
+ TIAQLTQQWRVVLVHGNGPQVGLLALQNSAYASVTPYPLDILGAESQGMIGYMLQQAL
+ KNQLPEREISVLLTQVEVDANDPAFLNPTKYIGPIYDEAQARALQAEKGWVFKADGNA
+ FRRVVPSPQPKRIVENDAIRALISRDHLVICNGGGGVPIVEKADGYHGIEAVIDKDLS
+ AALLASQIHADALLILTDADAVYLDWGKPTQRPLAQVTPELLREMQFDAGSMGPKVTA
+ CAEFVSRCRGIAGIGSLADGQAILAGEKGTLIRCETVEA"
+ misc_feature 3099451..3100344
+ /locus_tag="SARI_03185"
+ /note="carbamate kinase-like carbamoyl phosphate
+ synthetase; Reviewed; Region: PRK12454"
+ /db_xref="CDD:183535"
+ misc_feature 3099457..3100347
+ /locus_tag="SARI_03185"
+ /note="AAK_CK: Carbamate kinase (CK) catalyzes both the
+ ATP-phosphorylation of carbamate and carbamoyl phosphate
+ (CP) utilization with the production of ATP from ADP and
+ CP. Both CK (this CD) and nonhomologous CP synthetase
+ synthesize carbamoyl phosphate, an...; Region: AAK_CK;
+ cd04235"
+ /db_xref="CDD:239768"
+ misc_feature order(3099469..3099471,3099475..3099480,3099598..3099606,
+ 3099814..3099816,3100060..3100068)
+ /locus_tag="SARI_03185"
+ /note="putative substrate binding site [chemical binding];
+ other site"
+ /db_xref="CDD:239768"
+ misc_feature order(3099478..3099480,3100123..3100128,3100141..3100143,
+ 3100150..3100152,3100213..3100215,3100225..3100230,
+ 3100237..3100239)
+ /locus_tag="SARI_03185"
+ /note="nucleotide binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:239768"
+ misc_feature order(3099478..3099480,3100123..3100128,3100141..3100143,
+ 3100150..3100152,3100213..3100215,3100225..3100230,
+ 3100237..3100239)
+ /locus_tag="SARI_03185"
+ /note="nucleotide binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:239768"
+ misc_feature order(3099628..3099630,3099661..3099663,3099670..3099675,
+ 3099682..3099684,3099694..3099699,3099706..3099708,
+ 3099715..3099720,3099730..3099732,3099760..3099765,
+ 3099769..3099771,3099943..3099945,3099952..3099954,
+ 3100036..3100038,3100042..3100044)
+ /locus_tag="SARI_03185"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:239768"
+ gene 3100451..3101455
+ /locus_tag="SARI_03186"
+ CDS 3100451..3101455
+ /locus_tag="SARI_03186"
+ /inference="protein motif:HMMPfam:IPR006131"
+ /inference="protein motif:HMMPfam:IPR006132"
+ /inference="protein motif:HMMPIR:IPR006130"
+ /inference="protein motif:HMMTigr:IPR002292"
+ /inference="protein motif:ScanRegExp:IPR006130"
+ /inference="similar to AA sequence:SwissProt:Q8ZK35"
+ /note="catalyzes the formation of ornithine and
+ carbamylphosphate from citrulline in the arginine
+ catabolic pathway"
+ /codon_start=1
+ /transl_table=11
+ /product="ornithine carbamoyltransferase"
+ /protein_id="YP_001572165.1"
+ /db_xref="GI:161505053"
+ /db_xref="InterPro:IPR002292"
+ /db_xref="InterPro:IPR006130"
+ /db_xref="InterPro:IPR006131"
+ /db_xref="InterPro:IPR006132"
+ /translation="MSISLKKRNFIKLLDFTSAEIQHLIDLAIALKAAKKSGHEQKTL
+ IGKNIALIFEKTSTRTRCAFEVAAFDQGAQVTYLGPSGSQIGHKESMKDTARVLGRMY
+ DGIEYRGFGQHIVEELGEYAGVPVWNGLTDEFHPTQILADLMTMLEHAPGKTLPELSF
+ AYLGDARNNMGNSLMVGAAKMGMDIRLIAPKSFWPDAALIAQCREIANDTGARITLTE
+ SVKDGVHGVDFLYTDVWVSMGEPKEAWAERVSLMTPYQVNQQVVNATGNPDVKFMHCL
+ PAFHNEHTKVGREIEMAYGLKGLEVTEEVFESAGSIVFDEAENRMHTIKAVMVATLGD
+ "
+ misc_feature 3100451..3101452
+ /locus_tag="SARI_03186"
+ /note="ornithine carbamoyltransferase; Validated; Region:
+ PRK02102"
+ /db_xref="CDD:179366"
+ misc_feature 3100472..3100897
+ /locus_tag="SARI_03186"
+ /note="Aspartate/ornithine carbamoyltransferase,
+ carbamoyl-P binding domain; Region: OTCace_N; pfam02729"
+ /db_xref="CDD:217204"
+ misc_feature 3100922..3101443
+ /locus_tag="SARI_03186"
+ /note="Aspartate/ornithine carbamoyltransferase, Asp/Orn
+ binding domain; Region: OTCace; pfam00185"
+ /db_xref="CDD:215776"
+ gene 3101511..3102914
+ /locus_tag="SARI_03187"
+ CDS 3101511..3102914
+ /locus_tag="SARI_03187"
+ /inference="protein motif:HMMPfam:IPR004669"
+ /inference="similar to AA sequence:INSD:AAL23283.1"
+ /note="'COG: COG1288 Predicted membrane protein;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572166.1"
+ /db_xref="GI:161505054"
+ /db_xref="InterPro:IPR004669"
+ /translation="MGKFKFPTAYTILFILIALVAVMTWIVPAGKYQMAMNATLGKEV
+ PVAGTYAPVDAHPQGITAVLLAPIDGLYNHETYTAGAIDVALFVLIIGGFLGVVNKTG
+ AIDAGIERVTVRLNGKEEWMIPILMALFAAGGTIYGMAEESLPFYTLLVPVMMAARFD
+ PLVAAATVLLGAGIGTLGSTINPFATVIAANAAGIPFTQGMLMRVLLLIVGYVLCVVW
+ VMRYARKVRAHPELSIVADKMEENHAHFLGNRANTLLAFTATRKWVLLIFAASFAVMI
+ YGVAVLGWWMAEISGVFLAAAIIVGVITRMGEEAFTSTFIDGARDLLGVALIIGIARG
+ IVVVMDNGMITHTILHSAENLVSGLSTTIFINVTYWLEVLLSFLVPSSSGLAVLTMPI
+ MAPLADFAHVQRDLVVTAYQSASGIVNLITPTSAVVMGGLAIARVPYVRYLKWVAPLL
+ LILTLLNMTVLSIGAMM"
+ misc_feature 3101511..3102911
+ /locus_tag="SARI_03187"
+ /note="Predicted membrane protein [Function unknown];
+ Region: COG1288"
+ /db_xref="CDD:224207"
+ misc_feature 3101526..3102854
+ /locus_tag="SARI_03187"
+ /note="C4-dicarboxylate anaerobic carrier; Region: DcuC;
+ pfam03606"
+ /db_xref="CDD:217636"
+ gene 3102988..3103104
+ /locus_tag="SARI_03188"
+ CDS 3102988..3103104
+ /locus_tag="SARI_03188"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572167.1"
+ /db_xref="GI:161505055"
+ /translation="MIGFSFSCKTARLIRNQRDKCDEFRQSVDINNKDKVHL"
+ gene complement(3103000..3103098)
+ /locus_tag="SARI_03189"
+ CDS complement(3103000..3103098)
+ /locus_tag="SARI_03189"
+ /note="'Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572168.1"
+ /db_xref="GI:161505056"
+ /translation="MHLIFIIDINGLAKFITFVTLIADQSGGFAGK"
+ gene 3103101..3103589
+ /locus_tag="SARI_03190"
+ CDS 3103101..3103589
+ /locus_tag="SARI_03190"
+ /inference="protein motif:FPrintScan:IPR001669"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR001669"
+ /inference="protein motif:superfamily:IPR001669"
+ /inference="similar to AA sequence:INSD:AAX68223.1"
+ /note="'COG: COG1438 Arginine repressor;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572169.1"
+ /db_xref="GI:161505057"
+ /db_xref="InterPro:IPR001669"
+ /db_xref="InterPro:IPR011991"
+ /translation="MKEYDDYSAKEQQQLAVCQRLISEKSYLSQEEIRRDLQNEGFEG
+ ISQSTVSRLLKLLGAIKIRNTKGQKIYSVNPQRRPSPDAGRSIAEMVVSVEHNSEFIL
+ IHTAAGYGRAVARILDYHALPEILGVVAGSSIVWVAPRVVQRTALVHKQINYLLKMNL
+ NS"
+ misc_feature 3103122..3103568
+ /locus_tag="SARI_03190"
+ /note="Arginine repressor [Transcription]; Region: ArgR;
+ COG1438"
+ /db_xref="CDD:224355"
+ misc_feature 3103128..3103319
+ /locus_tag="SARI_03190"
+ /note="Arginine repressor, DNA binding domain; Region:
+ Arg_repressor; pfam01316"
+ /db_xref="CDD:201725"
+ misc_feature 3103365..3103565
+ /locus_tag="SARI_03190"
+ /note="Arginine repressor, C-terminal domain; Region:
+ Arg_repressor_C; pfam02863"
+ /db_xref="CDD:202435"
+ gene 3103816..3104751
+ /gene="pyrB"
+ /locus_tag="SARI_03191"
+ CDS 3103816..3104751
+ /gene="pyrB"
+ /locus_tag="SARI_03191"
+ /inference="protein motif:FPrintScan:IPR002082"
+ /inference="protein motif:FPrintScan:IPR006130"
+ /inference="protein motif:HMMPfam:IPR006131"
+ /inference="protein motif:HMMPfam:IPR006132"
+ /inference="protein motif:HMMPIR:IPR006130"
+ /inference="protein motif:HMMTigr:IPR002082"
+ /inference="protein motif:ScanRegExp:IPR006130"
+ /inference="similar to AA sequence:INSD:AAV79995.1"
+ /note="catalyzes the transfer of the carbamoyl moiety from
+ carbamoyl phosphate to L- aspartate in pyrimidine
+ biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="aspartate carbamoyltransferase catalytic
+ subunit"
+ /protein_id="YP_001572170.1"
+ /db_xref="GI:161505058"
+ /db_xref="InterPro:IPR002082"
+ /db_xref="InterPro:IPR006130"
+ /db_xref="InterPro:IPR006131"
+ /db_xref="InterPro:IPR006132"
+ /translation="MANPLYQKHIISINDLSRDDLNLVLATAAKLKAHPQPELLKHKV
+ IASCFFEASTRTRLSFETSMHRLGASVVGFSDSANTSLGKKGETLADTISVISTYVDA
+ IVMRHPQEGAARLATEFSGKVPVLNAGDGSNQHPTQTLLDLFTIQETQGRLDNLHIAM
+ VGDLKYGRTVHSLTQALAKFSGNRFYFIAPEALAMPQYILDMLDEKGMDWSLHGSIEE
+ VMAEVDILYMTRVQKERLDPSEYANVKAQFVLRASDLNGARENMKVLHPLPRIDEITT
+ DVDKTPHAWYFQQAGNGIFARQALLALVLNSELSL"
+ misc_feature 3103816..3104709
+ /gene="pyrB"
+ /locus_tag="SARI_03191"
+ /note="Aspartate carbamoyltransferase, catalytic chain
+ [Nucleotide transport and metabolism]; Region: PyrB;
+ COG0540"
+ /db_xref="CDD:223614"
+ misc_feature 3103837..3104259
+ /gene="pyrB"
+ /locus_tag="SARI_03191"
+ /note="Aspartate/ornithine carbamoyltransferase,
+ carbamoyl-P binding domain; Region: OTCace_N; pfam02729"
+ /db_xref="CDD:217204"
+ misc_feature 3104275..3104709
+ /gene="pyrB"
+ /locus_tag="SARI_03191"
+ /note="Aspartate/ornithine carbamoyltransferase, Asp/Orn
+ binding domain; Region: OTCace; pfam00185"
+ /db_xref="CDD:215776"
+ gene 3104765..3105226
+ /locus_tag="SARI_03192"
+ CDS 3104765..3105226
+ /locus_tag="SARI_03192"
+ /inference="protein motif:BlastProDom:IPR002801"
+ /inference="protein motif:Gene3D:IPR002801"
+ /inference="protein motif:HMMPfam:IPR002801"
+ /inference="protein motif:HMMTigr:IPR002801"
+ /inference="protein motif:superfamily:IPR011069"
+ /inference="similar to AA sequence:INSD:CAD06920.1"
+ /note="involved in the allosteric regulation of aspartate
+ carbamoyltransferase"
+ /codon_start=1
+ /transl_table=11
+ /product="aspartate carbamoyltransferase regulatory
+ subunit"
+ /protein_id="YP_001572171.1"
+ /db_xref="GI:161505059"
+ /db_xref="InterPro:IPR002801"
+ /db_xref="InterPro:IPR011069"
+ /translation="MTHDNKLQVEAIKCGTVIDHIPAQVGFKLLSLFKLTETEQRITI
+ GLNLPSGEMGRKDLIKIENTFLTDEQVNQLALYAPQATVNRIDNYDVVGKSRPSLPER
+ INNVLVCPNSNCISHAEPVSSCFAVKKRANDIALKCKYCEKEFSHNVVLAN"
+ misc_feature 3104768..3105223
+ /locus_tag="SARI_03192"
+ /note="aspartate carbamoyltransferase regulatory subunit;
+ Reviewed; Region: PRK00893"
+ /db_xref="CDD:234859"
+ misc_feature 3104774..3105061
+ /locus_tag="SARI_03192"
+ /note="Aspartate carbamoyltransferase regulatory chain,
+ allosteric domain; Region: PyrI; pfam01948"
+ /db_xref="CDD:216803"
+ misc_feature 3105065..3105220
+ /locus_tag="SARI_03192"
+ /note="Aspartate carbamoyltransferase regulatory chain,
+ metal binding domain; Region: PyrI_C; pfam02748"
+ /db_xref="CDD:217213"
+ gene 3105332..3105718
+ /locus_tag="SARI_03193"
+ CDS 3105332..3105718
+ /locus_tag="SARI_03193"
+ /inference="protein motif:Gene3D:IPR013813"
+ /inference="protein motif:HMMPfam:IPR006175"
+ /inference="protein motif:HMMTigr:IPR006056"
+ /inference="protein motif:ScanRegExp:IPR006056"
+ /inference="protein motif:superfamily:IPR013813"
+ /inference="similar to AA sequence:INSD:AAV79993.1"
+ /note="'KEGG: ape:APE_1501.1 1.4e-22 ribonuclease UK114;
+ COG: COG0251 Putative translation initiation inhibitor,
+ yjgF family;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572172.1"
+ /db_xref="GI:161505060"
+ /db_xref="InterPro:IPR006056"
+ /db_xref="InterPro:IPR006175"
+ /db_xref="InterPro:IPR013813"
+ /translation="MSKTIATENAPAAIGPYVQGVDLGSMVITSGQIPVDPKTGSVPE
+ DVSAQARQSLENVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATF
+ PARSCVEVARLPKDVKIEIEAIAVRR"
+ misc_feature 3105380..3105706
+ /locus_tag="SARI_03193"
+ /note="YjgF, YER057c, and UK114 belong to a large family
+ of proteins present in bacteria, archaea, and eukaryotes
+ with no definitive function. The conserved domain is
+ similar in structure to chorismate mutase but there is no
+ sequence similarity and no...; Region:
+ YjgF_YER057c_UK114_family; cd00448"
+ /db_xref="CDD:100004"
+ misc_feature order(3105380..3105385,3105392..3105394,3105398..3105400,
+ 3105407..3105409,3105413..3105415,3105419..3105424,
+ 3105539..3105541,3105545..3105550,3105554..3105556,
+ 3105560..3105562,3105593..3105595,3105602..3105604,
+ 3105638..3105661,3105689..3105691,3105695..3105697,
+ 3105701..3105703)
+ /locus_tag="SARI_03193"
+ /note="homotrimer interaction site [polypeptide binding];
+ other site"
+ /db_xref="CDD:100004"
+ misc_feature order(3105380..3105382,3105581..3105583,3105593..3105595,
+ 3105644..3105646,3105689..3105691)
+ /locus_tag="SARI_03193"
+ /note="putative active site [active]"
+ /db_xref="CDD:100004"
+ gene complement(3105812..3108520)
+ /locus_tag="SARI_03194"
+ CDS complement(3105812..3108520)
+ /locus_tag="SARI_03194"
+ /inference="protein motif:HMMPanther:IPR001757"
+ /inference="protein motif:HMMPfam:IPR004014"
+ /inference="protein motif:HMMPfam:IPR005834"
+ /inference="protein motif:HMMPfam:IPR008250"
+ /inference="protein motif:HMMTigr:IPR001757"
+ /inference="protein motif:HMMTigr:IPR006415"
+ /inference="protein motif:ScanRegExp:IPR001757"
+ /note="P-type ATPase involved in magnesium influx"
+ /codon_start=1
+ /transl_table=11
+ /product="magnesium-transporting ATPase MgtA"
+ /protein_id="YP_001572173.1"
+ /db_xref="GI:161505061"
+ /db_xref="InterPro:IPR001757"
+ /db_xref="InterPro:IPR004014"
+ /db_xref="InterPro:IPR005834"
+ /db_xref="InterPro:IPR006415"
+ /db_xref="InterPro:IPR008250"
+ /translation="MLKTITRQLFARLNRHLPYRLVHRDPLPGAQTAVNAPIPPSLSE
+ RCLKVAAMEQEALWRVFDTHPEGLNAAEVTRAREKYGENRLPAQKPSPWWVHLWVCYR
+ NPFNILLTILGGISYATEDLFAAGVIALMVCISTLLNFVQEARSTKAADALKAMVSNT
+ ATVLRVINENGENGWLELPIDQLVPGDIIKLAAGDMVPADLRIIQARDLFVAQASLTG
+ ESLPVEKVATTREPRQNNPLECDTLCFMGTNVVSGTAQAIVMATGADTWFGQLAGRVS
+ EQENEQNAFQKGISRVSMLLIRFMLVMAPIVLIINGYTKGDWWEAALFALSVAVGLTP
+ EMLPMIVTSTLARGAVKLSKQKVIVKHLDAIQNFGAMDILCTDKTGTLTQDKIVLENH
+ TDISGKPCGHVLHCAWLNSHYQTGLKNLLDTAVLEGVDETDARQLSGRWQKIDEIPFD
+ FERRRMSVVVAEDSNVHQLVCKGALQEILNVCTQVRHNGDIVPLDDNMLRRVKRVTDT
+ LNRQGLRVVAVATKYLPAREGDYQRIDESDLILEGYIAFLDPPKETTAPALKALKASG
+ ITVKILTGDSELVAAKVCHEVGLDAGDVVIGSDIEGLSDDALAALAARTTLFARLTPM
+ HKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAADIILLEKSL
+ MVLEEGVIEGRRTFSNMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLL
+ YDVSQVAIPFDNVDEEQIQKPQRWNPADLGRFMVFFGPISSIFDILTFCLMWWVFHAN
+ TPEAQTLFQSGWFVVGLLSQTLIVHMIRTRRLPFIQSRAAWPLMTMTLLVMVVGISLP
+ FSPLASYLQLQALPLSYFPWLIAILAGYMTLTQLVKGFYSRRYGWQ"
+ misc_feature complement(3105815..3108520)
+ /locus_tag="SARI_03194"
+ /note="magnesium-transporting ATPase MgtA; Provisional;
+ Region: PRK10517"
+ /db_xref="CDD:236705"
+ misc_feature complement(3108173..3108373)
+ /locus_tag="SARI_03194"
+ /note="Cation transporter/ATPase, N-terminus; Region:
+ Cation_ATPase_N; pfam00690"
+ /db_xref="CDD:201397"
+ misc_feature complement(3107423..3108142)
+ /locus_tag="SARI_03194"
+ /note="E1-E2 ATPase; Region: E1-E2_ATPase; pfam00122"
+ /db_xref="CDD:215733"
+ misc_feature complement(3107066..>3107263)
+ /locus_tag="SARI_03194"
+ /note="Putative hydrolase of sodium-potassium ATPase alpha
+ subunit; Region: Hydrolase_like2; pfam13246"
+ /db_xref="CDD:222006"
+ misc_feature complement(3106559..3106912)
+ /locus_tag="SARI_03194"
+ /note="haloacid dehalogenase-like hydrolase; Region: HAD;
+ pfam12710"
+ /db_xref="CDD:221729"
+ misc_feature complement(3106445..>3106645)
+ /locus_tag="SARI_03194"
+ /note="Soluble P-type ATPase [General function prediction
+ only]; Region: COG4087"
+ /db_xref="CDD:226572"
+ misc_feature complement(3105845..3106285)
+ /locus_tag="SARI_03194"
+ /note="Cation transporting ATPase, C-terminus; Region:
+ Cation_ATPase_C; pfam00689"
+ /db_xref="CDD:216063"
+ gene 3108733..3109851
+ /gene="treR"
+ /locus_tag="SARI_03195"
+ CDS 3108733..3109851
+ /gene="treR"
+ /locus_tag="SARI_03195"
+ /inference="protein motif:HMMPfam:IPR000843"
+ /inference="protein motif:HMMPfam:IPR001761"
+ /inference="protein motif:HMMSmart:IPR000843"
+ /inference="protein motif:HMMTigr:IPR012771"
+ /inference="protein motif:ScanRegExp:IPR000843"
+ /inference="protein motif:superfamily:IPR010982"
+ /inference="similar to AA sequence:SwissProt:P36674"
+ /note="regulates genes involved in trehalose metabolism;
+ binds the intermediate trehalose-6-phosphate; binds a
+ dimer; regulates treBC operon"
+ /codon_start=1
+ /transl_table=11
+ /product="trehalose repressor"
+ /protein_id="YP_001572174.1"
+ /db_xref="GI:161505062"
+ /db_xref="InterPro:IPR000843"
+ /db_xref="InterPro:IPR001761"
+ /db_xref="InterPro:IPR010982"
+ /db_xref="InterPro:IPR012771"
+ /translation="MICDADYTHKSISFVAIMAVSYRYVIKQNINQTLPIALRLSKVT
+ LFITISFAPRENRMENRLTIKDIARLSGVGKSTVSRVLNHESGVSERTRERVEAVMNQ
+ YGFSPSRSARAMRGQSDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFS
+ PTLVAEHLRMLRRRNIDGVVLFGFTGITEELIAPWKASLVLLAREAKGFASVCYDDED
+ AIHILMRRLYEQGHRNISFLGVPHSDVTTGKRRHDAYLAFCKKHKLHPVAALPGLAMK
+ QGYEHTASVIMPDTTALVCATDTLALGASKYLQEQRIETLQLASVGNTPLMKFLHPEI
+ VAVDPGYADAGRQAASQLIEQINGRCDPRRIVISSTLA"
+ misc_feature 3108904..3109848
+ /gene="treR"
+ /locus_tag="SARI_03195"
+ /note="trehalose repressor; Provisional; Region: treR;
+ PRK09492"
+ /db_xref="CDD:181905"
+ misc_feature 3108925..3109080
+ /gene="treR"
+ /locus_tag="SARI_03195"
+ /note="Helix-turn-helix (HTH) DNA binding domain of the
+ LacI family of transcriptional regulators; Region:
+ HTH_LacI; cd01392"
+ /db_xref="CDD:143331"
+ misc_feature order(3108925..3108927,3108949..3108963,3108967..3108972,
+ 3108979..3108981,3108994..3108999,3109006..3109008,
+ 3109045..3109047,3109054..3109056,3109063..3109068,
+ 3109072..3109077)
+ /gene="treR"
+ /locus_tag="SARI_03195"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:143331"
+ misc_feature 3109045..3109074
+ /gene="treR"
+ /locus_tag="SARI_03195"
+ /note="domain linker motif; other site"
+ /db_xref="CDD:143331"
+ misc_feature 3109093..3109845
+ /gene="treR"
+ /locus_tag="SARI_03195"
+ /note="Ligand-binding domain of DNA transcription
+ repressor specific for trehalose (TreR) which is a member
+ of the LacI-GalR family of bacterial transcription
+ regulators; Region: PBP1_TreR_like; cd01542"
+ /db_xref="CDD:107255"
+ misc_feature order(3109093..3109095,3109120..3109122,3109135..3109137,
+ 3109156..3109158,3109183..3109185,3109189..3109194,
+ 3109198..3109200,3109231..3109233,3109249..3109257,
+ 3109648..3109650,3109717..3109722)
+ /gene="treR"
+ /locus_tag="SARI_03195"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:107255"
+ misc_feature order(3109129..3109134,3109276..3109278,3109483..3109485,
+ 3109621..3109623,3109627..3109629,3109753..3109755)
+ /gene="treR"
+ /locus_tag="SARI_03195"
+ /note="ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:107255"
+ gene 3109989..3110288
+ /locus_tag="SARI_03196"
+ CDS 3109989..3110288
+ /locus_tag="SARI_03196"
+ /inference="protein motif:BlastProDom:IPR001996"
+ /inference="protein motif:HMMPfam:IPR001996"
+ /inference="protein motif:ScanRegExp:IPR001996"
+ /inference="similar to AA sequence:INSD:CAD06915.1"
+ /note="'KEGG: sty:STY4794 3.7e-38 treB; PTS system,
+ trehalose-specific IIBC component K02818:K02819;
+ COG: COG1263 Phosphotransferase system IIC components,
+ glucose/maltose/N-acetylglucosamine-specific;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572175.1"
+ /db_xref="GI:161505063"
+ /db_xref="InterPro:IPR001996"
+ /translation="MNELKQADIDRLIERVGGRDNIATVSHCITRLRFVLRQPANARL
+ KEIEQLPMVKGCFTNAGPFQMVIGTEVGDYYKAQLDATGKAHTDKEQAKKPLVRT"
+ misc_feature 3110022..3110237
+ /locus_tag="SARI_03196"
+ /note="PTS_IIB, PTS system, glucose/sucrose specific IIB
+ subunit. The bacterial phosphoenolpyruvate: sugar
+ phosphotransferase system (PTS) is a multi-protein system
+ involved in the regulation of a variety of metabolic and
+ transcriptional processes. This family...; Region:
+ PTS_IIB_glc; cd00212"
+ /db_xref="CDD:238130"
+ misc_feature 3110067..3110087
+ /locus_tag="SARI_03196"
+ /note="active site turn [active]"
+ /db_xref="CDD:238130"
+ misc_feature 3110070..3110072
+ /locus_tag="SARI_03196"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238130"
+ gene 3110285..3110467
+ /locus_tag="SARI_03197"
+ CDS 3110285..3110467
+ /locus_tag="SARI_03197"
+ /inference="similar to AA sequence:INSD:AAP19456.1"
+ /note="'KEGG: sfl:SF4250 2.1e-25 treB; trehalose specific
+ PTS system enzyme II K02818:K02819;
+ COG: COG1263 Phosphotransferase system IIC components,
+ glucose/maltose/N-acetylglucosamine-specific;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572176.1"
+ /db_xref="GI:161505064"
+ /translation="MKWHEQFISHFAEIFFPLLPALISGGLILGFGNVIGDVPMSNGQ
+ TLAQMYPTLKTLYDFL"
+ misc_feature 3110285..>3110425
+ /locus_tag="SARI_03197"
+ /note="Phosphotransferase system IIC components,
+ glucose/maltose/N-acetylglucosamine-specific [Carbohydrate
+ transport and metabolism]; Region: PtsG; COG1263"
+ /db_xref="CDD:224183"
+ gene 3110548..3111240
+ /locus_tag="SARI_03198"
+ CDS 3110548..3111240
+ /locus_tag="SARI_03198"
+ /inference="protein motif:HMMPfam:IPR003352"
+ /inference="similar to AA sequence:INSD:AAV79990.1"
+ /note="'KEGG: spt:SPA4255 3.2e-96 treB; trehalose-specific
+ IIBC component of PTS system K02818:K02819;
+ COG: COG1264 Phosphotransferase system IIB components;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572177.1"
+ /db_xref="GI:161505065"
+ /db_xref="InterPro:IPR003352"
+ /translation="MSSIEKVGYQAQVIPALLAGLTLEFIETRLKRIVPNYLYLVVVP
+ VCSLILAVFLAHTVIGPFGRMIGDGVAFAVRYMMTGSFAPIGAALFGFLYAPLVITGV
+ HQTTLAIDMQMVQSMGGTPVRPLIALSNIAQASAVVGIIISSRKHNERKISVPAAISA
+ YLGVTEPAMYGINLKYRFPMLCAMIGSGLAGLLCGLNGVIANGACRASYLYRRATGRC
+ TAWRWLSQSLSQ"
+ misc_feature 3110554..3111156
+ /locus_tag="SARI_03198"
+ /note="Phosphotransferase system IIC components,
+ glucose/maltose/N-acetylglucosamine-specific [Carbohydrate
+ transport and metabolism]; Region: PtsG; cl17885"
+ /db_xref="CDD:248439"
+ gene 3111753..3112897
+ /locus_tag="SARI_03199"
+ /note="Pseudogene compared to gi|16767699|ref|NP_463314.1|
+ trehalose-6-phosphate hydrolase [Salmonella typhimurium
+ LT2]"
+ gene complement(3112981..3113151)
+ /locus_tag="SARI_03200"
+ CDS complement(3112981..3113151)
+ /locus_tag="SARI_03200"
+ /inference="similar to AA sequence:INSD:AAX68214.1"
+ /note="'COG: NOG35849 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572178.1"
+ /db_xref="GI:161505066"
+ /translation="MICIKDVCNFIDVEQGKNQSVQMAGIVAFVKDSKKNLINYSTKT
+ DSKLEQRRSPCQ"
+ gene 3113371..3115494
+ /locus_tag="SARI_03201"
+ CDS 3113371..3115494
+ /locus_tag="SARI_03201"
+ /inference="protein motif:HMMPfam:IPR001150"
+ /inference="protein motif:HMMPfam:IPR005144"
+ /inference="protein motif:HMMTigr:IPR012833"
+ /inference="protein motif:ScanRegExp:IPR001150"
+ /note="Catalyzes the reduction of nucleoside
+ 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates"
+ /codon_start=1
+ /transl_table=11
+ /product="anaerobic ribonucleoside triphosphate reductase"
+ /protein_id="YP_001572179.1"
+ /db_xref="GI:161505067"
+ /db_xref="InterPro:IPR001150"
+ /db_xref="InterPro:IPR005144"
+ /db_xref="InterPro:IPR012833"
+ /translation="MKRDGCKVPFKSERIKEAILRAAKAAGVDDADYCATVAEVVSSQ
+ MNARSQVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIQREKRGRLNQEIRGLVE
+ QTNSALLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLD
+ YSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGT
+ TINRIDEVLAPFVTASFNKHRQTAAEWQIPDAEGYARSRTEKECYDAFQSLEYEVNTL
+ HTANGQTPFVTFGFGLGTSWESRLIQASILRNRIAGLGKNRKTAVFPKLVFAIRDGLN
+ HKFGDPNYDIKQLALECASKRMYPDILNYDQVVNVTGSFKTPMGCRSFLGVWENENGE
+ QIHDGRNNLGVISLNLPRIALEAKGDETAFWKLLDERLALARKALMTRIARLEGVKAR
+ VAPILYMEGACGVRLKADDDVSEIFKNGRASISLGYIGIHETINALFGGEHLYDSEQL
+ RAKGIAIVERLRQAVDQWKDETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKG
+ YYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSY
+ QHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDAARVSVTRRVCGYLGSPD
+ ARPFNAGKQEEVKRRVKHLGNGQIG"
+ misc_feature 3113374..3115488
+ /locus_tag="SARI_03201"
+ /note="anaerobic ribonucleoside triphosphate reductase;
+ Provisional; Region: PRK09263"
+ /db_xref="CDD:236436"
+ misc_feature 3113374..3113625
+ /locus_tag="SARI_03201"
+ /note="ATP cone domain; Region: ATP-cone; pfam03477"
+ /db_xref="CDD:217585"
+ misc_feature 3113701..3115410
+ /locus_tag="SARI_03201"
+ /note="Class III ribonucleotide reductase; Region:
+ RNR_III; cd01675"
+ /db_xref="CDD:153084"
+ misc_feature order(3113833..3113835,3113839..3113844,3113938..3113952,
+ 3113962..3113964,3113971..3113976,3113983..3113985,
+ 3114079..3114081,3114991..3115002,3115009..3115011)
+ /locus_tag="SARI_03201"
+ /note="effector binding site; other site"
+ /db_xref="CDD:153084"
+ misc_feature order(3113878..3113880,3114019..3114021,3114223..3114225,
+ 3114502..3114507,3114574..3114576,3114985..3114987,
+ 3114994..3114996)
+ /locus_tag="SARI_03201"
+ /note="active site"
+ /db_xref="CDD:153084"
+ misc_feature order(3115285..3115287,3115294..3115296,3115339..3115341,
+ 3115348..3115350)
+ /locus_tag="SARI_03201"
+ /note="Zn binding site [ion binding]; other site"
+ /db_xref="CDD:153084"
+ misc_feature 3115387..3115401
+ /locus_tag="SARI_03201"
+ /note="glycine loop; other site"
+ /db_xref="CDD:153084"
+ gene 3115679..3116143
+ /locus_tag="SARI_03202"
+ CDS 3115679..3116143
+ /locus_tag="SARI_03202"
+ /inference="similar to AA sequence:INSD:AAZ90898.1"
+ /note="'KEGG: ssn:SSO_4418 1.4e-47 nrdG; anaerobic
+ ribonucleotide reductase activating protein K04068;
+ COG: COG0602 Organic radical activating enzymes;
+ Psort location: cytoskeletal, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="anaerobic ribonucleotide reductase-activating
+ protein"
+ /protein_id="YP_001572180.2"
+ /db_xref="GI:448236271"
+ /translation="MRFHQYYPVDIVNGPGTRCTLFVSGCVHECPGCYNKSTWRLNSG
+ QPFTKEMEERIIADLNDTRIKRQGLSLSGGDPLHPQNVPDILKLVLRIREECPGKDIW
+ VWTGYKMAELNAAQMQVVDLINVLVDGKFMQDLKDPMLIWRGSSNQVVHYLR"
+ misc_feature 3115682..3116140
+ /locus_tag="SARI_03202"
+ /note="anaerobic ribonucleoside-triphosphate reductase
+ activating protein; Region: NrdG; TIGR02491"
+ /db_xref="CDD:233893"
+ misc_feature 3115751..>3116068
+ /locus_tag="SARI_03202"
+ /note="Radical SAM superfamily. Enzymes of this family
+ generate radicals by combining a 4Fe-4S cluster and
+ S-adenosylmethionine (SAM) in close proximity. They are
+ characterized by a conserved CxxxCxxC motif, which
+ coordinates the conserved iron-sulfur cluster; Region:
+ Radical_SAM; cd01335"
+ /db_xref="CDD:100105"
+ misc_feature order(3115754..3115756,3115760..3115762,3115766..3115768,
+ 3115772..3115780,3115892..3115894,3115898..3115903,
+ 3115985..3115993,3116054..3116056)
+ /locus_tag="SARI_03202"
+ /note="FeS/SAM binding site; other site"
+ /db_xref="CDD:100105"
+ gene complement(3116153..3116437)
+ /locus_tag="SARI_03203"
+ CDS complement(3116153..3116437)
+ /locus_tag="SARI_03203"
+ /inference="protein motif:HMMPfam:IPR007712"
+ /inference="protein motif:HMMTigr:IPR012753"
+ /inference="similar to AA sequence:REFSEQ:YP_219292.1"
+ /note="'COG: COG2026 Cytotoxic translational repressor of
+ toxin-antitoxin stability system;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572181.1"
+ /db_xref="GI:161505069"
+ /db_xref="InterPro:IPR007712"
+ /db_xref="InterPro:IPR012753"
+ /translation="MTYELEFDPRALKEWQKLGETVKKQFRKKLVDVLSNPRVESARL
+ RELPDCYKIKLKTSGYRLVYQVQDDVVLVVVIAIGKREKSAVYRQADKRL"
+ misc_feature complement(3116177..3116437)
+ /locus_tag="SARI_03203"
+ /note="Cytotoxic translational repressor of
+ toxin-antitoxin stability system [Translation, ribosomal
+ structure and biogenesis / Cell division and chromosome
+ partitioning]; Region: RelE; COG2026"
+ /db_xref="CDD:224937"
+ gene complement(3116427..3116669)
+ /locus_tag="SARI_03204"
+ CDS complement(3116427..3116669)
+ /locus_tag="SARI_03204"
+ /inference="protein motif:HMMPfam:IPR007337"
+ /inference="protein motif:HMMTigr:IPR007337"
+ /inference="protein motif:superfamily:IPR010985"
+ /inference="similar to AA sequence:INSD:CAD06909.1"
+ /note="Qin prophage; bifunctional antitoxin of the
+ RelE-RelB toxin-antitoxin system/transcriptional
+ repressor"
+ /codon_start=1
+ /transl_table=11
+ /product="bifunctional antitoxin/transcriptional repressor
+ RelB"
+ /protein_id="YP_001572182.1"
+ /db_xref="GI:161505070"
+ /db_xref="InterPro:IPR007337"
+ /db_xref="InterPro:IPR010985"
+ /translation="MATLNVRLDDKLKNEAYAVLEKLNITPTEAVRLLFQYVAENGRM
+ PVKTVTISDSEDTLLQTVRERLANPQKGIRVSLDDL"
+ misc_feature complement(3116430..3116669)
+ /locus_tag="SARI_03204"
+ /note="bifunctional antitoxin/transcriptional repressor
+ RelB; Provisional; Region: PRK11235"
+ /db_xref="CDD:183047"
+ gene complement(3116748..3116969)
+ /locus_tag="SARI_03205"
+ CDS complement(3116748..3116969)
+ /locus_tag="SARI_03205"
+ /inference="protein motif:Gene3D:IPR002178"
+ /inference="similar to AA sequence:REFSEQ:YP_153295.1"
+ /note="'COG: COG3711 Transcriptional antiterminator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572183.1"
+ /db_xref="GI:161505071"
+ /db_xref="InterPro:IPR002178"
+ /translation="MVYTVLAPQGIVWGDETAHVIFLLAISKSEYEEAMAIYNIFVTF
+ LRERAMTRLCACQNFTQFKTVAMECVSRF"
+ misc_feature complement(3116760..>3116966)
+ /locus_tag="SARI_03205"
+ /note="Mannitol/fructose-specific phosphotransferase
+ system, IIA domain [Carbohydrate transport and
+ metabolism]; Region: MtlA; COG4668"
+ /db_xref="CDD:227014"
+ gene complement(3117079..3117468)
+ /locus_tag="SARI_03206"
+ CDS complement(3117079..3117468)
+ /locus_tag="SARI_03206"
+ /inference="similar to AA sequence:REFSEQ:YP_219284.1"
+ /note="'COG: NOG18555 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572184.1"
+ /db_xref="GI:161505072"
+ /translation="MEQITVVIGDRLGKGQKVAAGVAKEMRRLMMKEQFTTTVRVKGK
+ GDAKARAFADALNHVQSAVMRELPHILLRIEPQDVRIVQAHESVRKEAFLFFFLRRER
+ RTYSVELDVTVNVTAINLDRVDFVAKR"
+ misc_feature complement(<3117322..3117459)
+ /locus_tag="SARI_03206"
+ /note="Glycine-rich SFCGS; Region: Gly_rich_SFCGS;
+ cl11916"
+ /db_xref="CDD:209392"
+ misc_feature complement(3117088..3117375)
+ /locus_tag="SARI_03206"
+ /note="conserved hypothetical protein EF_0831/AHA_3912;
+ Region: EF_0831; TIGR03578"
+ /db_xref="CDD:213831"
+ gene complement(3117479..3117808)
+ /locus_tag="SARI_03207"
+ CDS complement(3117479..3117808)
+ /locus_tag="SARI_03207"
+ /inference="protein motif:HMMPfam:IPR011608"
+ /inference="similar to AA sequence:INSD:AAL23260.1"
+ /note="'KEGG: stm:STM4006 0.0092 glnL; sensory kinase
+ (phosphatase) in two-component regulatory system with GlnG
+ (nitrogen regulator II, NRII) K07708;
+ COG: NOG18554 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572185.1"
+ /db_xref="GI:161505073"
+ /db_xref="InterPro:IPR011608"
+ /translation="MDNGAVKHDAGERINELAKQVLTQVDGLLGRHHIVPNAVQTQML
+ TSHVRAMAHRSITGEPLPEVDASLFDEIAAESMALAREIVAAFGNLPDEEAWLLSVHF
+ EVAKDNL"
+ misc_feature complement(3117485..3117805)
+ /locus_tag="SARI_03207"
+ /note="PRD domain protein EF_0829/AHA_3910; Region:
+ EF_0829; TIGR03582"
+ /db_xref="CDD:132621"
+ gene complement(3118095..3118481)
+ /locus_tag="SARI_03208"
+ CDS complement(3118095..3118481)
+ /locus_tag="SARI_03208"
+ /inference="protein motif:Gene3D:IPR010980"
+ /inference="protein motif:HMMPfam:IPR009155"
+ /inference="protein motif:HMMPIR:IPR009155"
+ /inference="similar to AA sequence:INSD:AAV79974.1"
+ /note="'KEGG: eco:b4236 3.1e-41 cybC; cytochrome b562,
+ truncated (pseudogene);
+ COG: COG3783 Soluble cytochrome b562;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572186.1"
+ /db_xref="GI:161505074"
+ /db_xref="InterPro:IPR009155"
+ /db_xref="InterPro:IPR010980"
+ /translation="MRKHLLAIVAASTLALGSSAFAADLEDNMNILNDNLKVVEKTDS
+ APELKAALTKMRAAALDAQKATPPKLEDKAPDSPEMKDFRHGFDILVGQIDGALKLAN
+ EGNVKEAKAAAEALKTTRNTYHKKYR"
+ misc_feature complement(3118098..3118481)
+ /locus_tag="SARI_03208"
+ /note="cytochrome b562; Provisional; Region: PRK15058"
+ /db_xref="CDD:185018"
+ gene complement(3118530..3119951)
+ /locus_tag="SARI_03209"
+ CDS complement(3118530..3119951)
+ /locus_tag="SARI_03209"
+ /inference="protein motif:HMMPfam:IPR002510"
+ /inference="similar to AA sequence:REFSEQ:YP_219279.1"
+ /note="protease involved in proteolytic processing of the
+ antibiotic Microcin B17 and in sensitivity to the DNA
+ gyrase inhibitor LetD"
+ /codon_start=1
+ /transl_table=11
+ /product="peptidase PmbA"
+ /protein_id="YP_001572187.1"
+ /db_xref="GI:161505075"
+ /db_xref="InterPro:IPR002510"
+ /translation="MLPVKMRTEKRFSVRLQRNSLYIMAFAMKVISQVEAQRKILEEA
+ VSTALELASGKSDGAEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRKGSA
+ SSTDLSPQAIARTVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVTPDEA
+ IELAARAEQASLKADKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIA
+ EDNGDMERDYAYTIGRAMADLQAPEWVGAECARRTLSRLAPRKLSTMKAPVLFANEVA
+ TGLFGHLVGAIAGGAVYRKSTFLLDSLGKQILPEWLTIEEHPHLLKGLASSPFDSEGV
+ RTERRDIVKDGVLTQWLLTNYSARKLGLKSTGHAGGIHNWRIAGQGLNFEQLLKEMGT
+ GLVVTELMGQGVSGITGDYSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNIVSVGD
+ DIETRSNIQCGSVLLPEMKIAGQ"
+ misc_feature complement(3118533..3119870)
+ /locus_tag="SARI_03209"
+ /note="peptidase PmbA; Provisional; Region: PRK11040"
+ /db_xref="CDD:182922"
+ gene 3119978..3120529
+ /locus_tag="SARI_03210"
+ CDS 3119978..3120529
+ /locus_tag="SARI_03210"
+ /inference="protein motif:HMMPfam:IPR006839"
+ /inference="protein motif:HMMPIR:IPR006839"
+ /inference="protein motif:superfamily:IPR010921"
+ /inference="similar to AA sequence:SwissProt:P60829"
+ /note="'COG: COG3028 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572188.1"
+ /db_xref="GI:161505076"
+ /db_xref="InterPro:IPR006839"
+ /db_xref="InterPro:IPR010921"
+ /translation="MTKQPEDWLDDVPGDDIEDEDDEIIWVSKSEIKRDAEELKRLGA
+ ELVDLGRNALDKIPLDADLRDAIELAQRIKMEGRRRQLQLIGKMLRQRDVDPIRQALD
+ KLKNRHNQQVVLFHKLEHLRDRLIVEGDDAVAEILNLWPNADRQQLRSLIRNAKKEKE
+ GNKPPKSARQIFQYLRELAENEG"
+ misc_feature 3120053..3120517
+ /locus_tag="SARI_03210"
+ /note="hypothetical protein; Provisional; Region:
+ PRK05255"
+ /db_xref="CDD:235377"
+ gene complement(3120634..3121971)
+ /locus_tag="SARI_03211"
+ CDS complement(3120634..3121971)
+ /locus_tag="SARI_03211"
+ /inference="protein motif:HMMPfam:IPR000713"
+ /inference="protein motif:HMMPfam:IPR004101"
+ /inference="protein motif:HMMPfam:IPR013221"
+ /inference="protein motif:HMMPIR:IPR012237"
+ /inference="protein motif:HMMTigr:IPR005757"
+ /inference="similar to AA sequence:INSD:CAD06896.1"
+ /note="'KEGG: stt:t4470 2.4e-240 mpl; murein peptide
+ ligase K02558;
+ COG: COG0773 UDP-N-acetylmuramate-alanine ligase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572189.1"
+ /db_xref="GI:161505077"
+ /db_xref="InterPro:IPR000713"
+ /db_xref="InterPro:IPR004101"
+ /db_xref="InterPro:IPR005757"
+ /db_xref="InterPro:IPR012237"
+ /db_xref="InterPro:IPR013221"
+ /translation="MGGLAMLARSLGHEVTGSDANVYPPMSTLLEKQGIDLIQGYDAS
+ QLDPQPDLVIIGNAMTRGNPCVEAVLEKNIPFMSGPQWLHDFVLRDRWVLAVAGTHGK
+ TTTAGMATWILEACGYKPGFVIGGVPGNFEVSARLGESLFFVIEADEYDCAFFDKRSK
+ FVHYCPRTLILNNLEFDHADIFDDLKAIQKQFHHLVRIVPGQGRIIWPENDINLKQTM
+ ALGCWSEQELVGEQGHWQAKKLTTDASEWEVWLDGEKVGDVKWGLVGEHNMHNGLMAI
+ AATRHVGVAPAEAASALGSFINARRRLELRGEAHGVTVYDDFAHHPTAILATLAALRG
+ KVGGTARIIAVLEPRSNTMKMGLCKDDLAPSLGRADEVFLLQPPHIPWQVSEVADACV
+ QPAHWSGDVDTLADMVVKTAQPGDHILVMSNGGFGGIHQKLLDRLAKKAHATE"
+ misc_feature complement(3120658..3121971)
+ /locus_tag="SARI_03211"
+ /note="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
+ meso-diaminopimelate ligase; Region: mpl; TIGR01081"
+ /db_xref="CDD:130153"
+ misc_feature complement(3121699..3121971)
+ /locus_tag="SARI_03211"
+ /note="Mur ligase family, catalytic domain; Region:
+ Mur_ligase; pfam01225"
+ /db_xref="CDD:216373"
+ misc_feature complement(3121168..3121680)
+ /locus_tag="SARI_03211"
+ /note="Mur ligase middle domain; Region: Mur_ligase_M;
+ pfam08245"
+ /db_xref="CDD:219763"
+ misc_feature complement(<3120934..3121074)
+ /locus_tag="SARI_03211"
+ /note="Mur ligase family, glutamate ligase domain; Region:
+ Mur_ligase_C; pfam02875"
+ /db_xref="CDD:217262"
+ gene 3122000..3122185
+ /locus_tag="SARI_03212"
+ CDS 3122000..3122185
+ /locus_tag="SARI_03212"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572190.1"
+ /db_xref="GI:161505078"
+ /translation="MRIRHYPFFICAPFYAHVWQVRNAFQVNLYFAGAIHLSASSEMF
+ VKIVTVALLQSIAGKVL"
+ gene 3122182..3123180
+ /locus_tag="SARI_03213"
+ CDS 3122182..3123180
+ /locus_tag="SARI_03213"
+ /inference="protein motif:BlastProDom:IPR000146"
+ /inference="protein motif:HMMPanther:IPR000146"
+ /inference="protein motif:HMMPfam:IPR000146"
+ /inference="protein motif:HMMPIR:IPR000146"
+ /inference="protein motif:ScanRegExp:IPR000146"
+ /inference="similar to AA sequence:INSD:AAV79971.1"
+ /note="'catalyzes the formation of D-fructose 6-phosphate
+ from fructose-1,6-bisphosphate'"
+ /codon_start=1
+ /transl_table=11
+ /product="fructose-1,6-bisphosphatase"
+ /protein_id="YP_001572191.1"
+ /db_xref="GI:161505079"
+ /db_xref="InterPro:IPR000146"
+ /translation="MKTLGEFIVEKQHEFSQATGELTALLSAIKLGAKIIHRDINKAG
+ LVDILGASGAENVQGEVQQKLDLFANEKLKAALKARDIVAGIASEEEDEIVVFEGCEH
+ AKYVVLMDPLDGSSNIDVNVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVV
+ YGSSTMLVYTTGCGVHAFTYDPSLGVFCLCQERMRFPEKGKTYSINEGNYIKFPNGVK
+ KYIKFCQEEDSSTSRPYTSRYIGSLVADFHRNLLKGGIYLYPSTASHPQGKLRLLYEC
+ NPMAFLAEQAGGKASDGKERILDIIPESLHQRRSFFVGNRHMVEDVERFIREYPDA"
+ misc_feature 3122203..3123159
+ /locus_tag="SARI_03213"
+ /note="Fructose-1,6-bisphosphatase, an enzyme that
+ catalyzes the hydrolysis of fructose-1,6-biphosphate into
+ fructose-6-phosphate and is critical in gluconeogenesis
+ pathway. The alignment model also includes chloroplastic
+ FBPases and sedoheptulose-1; Region: FBPase; cd00354"
+ /db_xref="CDD:238214"
+ misc_feature order(3122203..3122205,3122212..3122214,3122236..3122238,
+ 3122242..3122250,3122491..3122496,3122575..3122577)
+ /locus_tag="SARI_03213"
+ /note="AMP binding site [chemical binding]; other site"
+ /db_xref="CDD:238214"
+ misc_feature order(3122377..3122379,3122446..3122451,3122509..3122511,
+ 3122515..3122517,3123004..3123006)
+ /locus_tag="SARI_03213"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:238214"
+ misc_feature order(3122518..3122520,3122524..3122529,3122806..3122808,
+ 3122893..3122898,3122908..3122910,3122956..3122958,
+ 3122986..3122988)
+ /locus_tag="SARI_03213"
+ /note="active site"
+ /db_xref="CDD:238214"
+ gene 3123205..3123387
+ /locus_tag="SARI_03214"
+ CDS 3123205..3123387
+ /locus_tag="SARI_03214"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572192.1"
+ /db_xref="GI:161505080"
+ /translation="MKPPSGNEMPDGGFALSDRLFFRFLTLPVILLHQASGEAEAKTS
+ EDFQRELAIILATCLS"
+ gene 3123405..3123935
+ /locus_tag="SARI_03215"
+ CDS 3123405..3123935
+ /locus_tag="SARI_03215"
+ /inference="protein motif:BlastProDom:IPR008162"
+ /inference="protein motif:Gene3D:IPR008162"
+ /inference="protein motif:HMMPanther:IPR008162"
+ /inference="protein motif:HMMPfam:IPR008162"
+ /inference="protein motif:ScanRegExp:IPR008162"
+ /inference="protein motif:superfamily:IPR008162"
+ /inference="similar to AA sequence:INSD:AAL23234.1"
+ /note="catalyzes the hydrolysis of pyrophosphate to
+ phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="inorganic pyrophosphatase"
+ /protein_id="YP_001572193.1"
+ /db_xref="GI:161505081"
+ /db_xref="InterPro:IPR008162"
+ /translation="MSLLNVPAGKELPEDIYVVIEIPANADPIKYEVDKESGALFVDR
+ FMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGE
+ DAKLVAVPHTKLSKDYDHIKDVNDLPELLKAQIAHFFEHYKDLEKGKWVKVDGWDNAE
+ AAKAEIVASFERAAKK"
+ misc_feature 3123444..3123917
+ /locus_tag="SARI_03215"
+ /note="Inorganic pyrophosphatase. These enzymes hydrolyze
+ inorganic pyrophosphate (PPi) to two molecules of
+ orthophosphates (Pi). The reaction requires bivalent
+ cations. The enzymes in general exist as homooligomers;
+ Region: pyrophosphatase; cd00412"
+ /db_xref="CDD:238239"
+ misc_feature order(3123474..3123479,3123636..3123641)
+ /locus_tag="SARI_03215"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238239"
+ misc_feature order(3123492..3123494,3123534..3123536,3123570..3123572,
+ 3123828..3123833)
+ /locus_tag="SARI_03215"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:238239"
+ misc_feature order(3123498..3123500,3123600..3123602,3123615..3123617,
+ 3123696..3123698,3123711..3123713)
+ /locus_tag="SARI_03215"
+ /note="metal binding sites [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:238239"
+ gene complement(3124110..3124241)
+ /locus_tag="SARI_03216"
+ CDS complement(3124110..3124241)
+ /locus_tag="SARI_03216"
+ /note="'Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572194.1"
+ /db_xref="GI:161505082"
+ /translation="MMVVTPHVNAQYVVKKDFLINTLVSIIVILDGKLFGVKPVNQE"
+ gene complement(3124288..3125499)
+ /locus_tag="SARI_03217"
+ CDS complement(3124288..3125499)
+ /locus_tag="SARI_03217"
+ /inference="protein motif:HMMPfam:IPR008514"
+ /inference="similar to AA sequence:INSD:AAN82669.1"
+ /note="'KEGG: eci:UTI89_C0121 8.6e-55 usp; uropathogenic
+ specific protein K01150;
+ COG: COG3157 Hemolysin-coregulated protein
+ (uncharacterized);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572195.1"
+ /db_xref="GI:161505083"
+ /db_xref="InterPro:IPR008514"
+ /translation="MSNIVYLKLIGEQQGDISDGGGTIASVGNRWQQNHVNEIFVFSL
+ GAGVTNTGKGTNLQGLTFSKQIDKSSPLLMNAINNNENLFFEFWFYRINRYGQWEKYY
+ YIQLRGASISSIQLRIIEDEIHTETISVNYDYILSKHLISNTEFSYLALPAEYNKLFV
+ PAPKPQTQTLNSAGVGRLLAAGGIYNGNIEGFRDTAEKLGGDAVKGYDQILNEKTVST
+ AIIAASIAAGYGLGRMGLSSTIRSLEKLRRIETKGVSLGRSATADNLYRRTSNTEVFS
+ DLKVPMQMRFVEQAAREGGVGLGGVKVKIIRDSDLKGKNIYGYTHPNGDIDLYPDAST
+ DIEQLIKTLGHERTHTMQNYLFKHPNTYADDAIKMNRELILNEKAAHSIEDSFWQFYL
+ NNKTGKLEEYK"
+ misc_feature complement(3125053..3125493)
+ /locus_tag="SARI_03217"
+ /note="Protein of unknown function (DUF796); Region:
+ DUF796; cl01226"
+ /db_xref="CDD:242377"
+ gene complement(3125611..3125736)
+ /locus_tag="SARI_03218"
+ CDS complement(3125611..3125736)
+ /locus_tag="SARI_03218"
+ /note="'Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572196.1"
+ /db_xref="GI:161505084"
+ /translation="MALFYAVAALIPGYQDAFLFFTIALKCLFSEALISGDYSFS"
+ gene complement(3125888..3126232)
+ /locus_tag="SARI_03219"
+ CDS complement(3125888..3126232)
+ /locus_tag="SARI_03219"
+ /inference="protein motif:HMMPfam:IPR005347"
+ /inference="similar to AA sequence:INSD:AAL23231.1"
+ /note="'COG: COG2105 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572197.1"
+ /db_xref="GI:161505085"
+ /db_xref="InterPro:IPR005347"
+ /translation="MRIFVYGSLRQKQGNSHWMTNAQLLGDYSIDNYQLYSLGHYPGA
+ VPGNGSVYGEVYRIDNATLAELDALRTRGGEYARQLIQTPYGSAWMYVYQRPVDGLTL
+ IESGDWLDRNQH"
+ misc_feature complement(3125954..3126226)
+ /locus_tag="SARI_03219"
+ /note="GGCT-like domains, also called AIG2-like family.
+ Gamma-glutamyl cyclotransferase (GGCT) catalyzes the
+ formation of pyroglutamic acid (5-oxoproline) from
+ dipeptides containing gamma-glutamyl, and is a dimeric
+ protein. In Homo sapiens, the protein is...; Region:
+ GGCT_like; cd06661"
+ /db_xref="CDD:119400"
+ misc_feature complement(order(3125954..3125956,3126005..3126007,
+ 3126023..3126028,3126206..3126211,3126215..3126217,
+ 3126224..3126226))
+ /locus_tag="SARI_03219"
+ /note="putative active site pocket [active]"
+ /db_xref="CDD:119400"
+ misc_feature complement(order(3125957..3125959,3125966..3125968,
+ 3125987..3125989,3125993..3126007,3126089..3126091,
+ 3126095..3126100))
+ /locus_tag="SARI_03219"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:119400"
+ misc_feature complement(3126023..3126025)
+ /locus_tag="SARI_03219"
+ /note="putative catalytic residue [active]"
+ /db_xref="CDD:119400"
+ gene complement(3126235..3130014)
+ /locus_tag="SARI_03220"
+ CDS complement(3126235..3130014)
+ /locus_tag="SARI_03220"
+ /inference="protein motif:HMMPfam:IPR007452"
+ /note="'KEGG: bmf:BAB1_0046 1.1e-13 family of unknown
+ function DUF490 K01076;
+ COG: COG2911 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572198.1"
+ /db_xref="GI:161505086"
+ /db_xref="InterPro:IPR007452"
+ /translation="MSLWKKISLGVLIFIVLLLASVAFLVGTMTGLHLVFSAANRWVP
+ GLEIGQVTGGWRDLSLKNIRYEQPGVAVNAGEIHLAVGLDCLWHSTLCVNDLALKDIN
+ VAIDSKKMPPSEQAQEEEDSGPLNLSTPWPVTLSRVALNNINIKIDDTTVSVLDFTSG
+ LAWQDKNLTLKPTRLQGLLIALPKVADVAQKEVVEPKIEKPQPDEKPLGETLKDLFAK
+ PVMPEMTDVHLPLNLNIESFRGEQLRVTGDTDLTVRTMLLKVSSIDGNMKLDTLDIDA
+ NQGTVKASGTAQLANNWPVDITLNSTLNIDPLKGEKIKLKVGGALREQLEVGVNLSGP
+ MDVALRAQTRLAEAGLPLNLEVVSQRIAWPFTGNTQFQADDLKLKLSGKMTDYTLSMR
+ TAVKGQDIPPATITLDAKGNERQINLDKLTVAALEGKTELKALVDWQQAFSWRGELTL
+ NDINTAKEIPDWPAKLNGVMKTKGSLYGGTWQMDVPELKLTGNVKQNNVNVNGTLKGN
+ SYMQWTIPGLHLALGPNSADVKGELGVKDLNLDATIDAPGLDNALPGLGGTAKGIVKV
+ RGTVEAPQLLADITARGLRWQALSIAQARIEGDIKSTDQIAGHLNVRVERISQPDVNI
+ NLVTLDAKGSEKQHQLQLRVQGEPVSGQLSLNGSFDRGAERWKGTLSDTRFQTPVGPW
+ SLTRAITLDYRNKEQKISIGPHCWLNPNAELCVPQTIDAGAAGRAVVNLNRFDLAMLK
+ PFMPDTTQASGIFSGKADVSWDTTKEGLPQGNVTLSGRNVKVTQTVNDAPLPVAFETL
+ NLSADLHNNRAELGWLIRLTNNGQFDGKVQVSDPQGRRNLGGNVNMRNVNLAMVNPIF
+ SRGEKAAGMLNARLRLGGDVQSPQLFGQLQLSALDIDGNFMPFEMQPSQLTMNFSGTR
+ STLAGIVRTQQGQINLNGNADWSQIDNWRARVTAKGSRVRITVPPMVRLDVSPDVVFD
+ ATPSLFTLDGRVDVPWARIVVHELPESAVGVSSDVVMLNNNLQPETPQTASIPINSNL
+ TVHVGNNVRIDAFGLKARLTGDLKVAQDKQGLGLNGQINIPDGRFRAYGQDLLVRKGE
+ LLFSGPPDQPLLNIEAIRNPDATEDDVIAGVRVTGTADEPKAEIFSDPAMPQAEALSY
+ LLRGQGLDSNQSDSAAMTSMLIGLGVAQSGQVVGKIGETFGVSNLALDTQGVGDSSQV
+ VVSGYVLPGLQVKYGIGIFDSLATLTLRYRLMPKLYLEAVSGVDQALDLLYQFEF"
+ misc_feature complement(3126238..3130014)
+ /locus_tag="SARI_03220"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG2911"
+ /db_xref="CDD:225463"
+ misc_feature complement(3126238..3127242)
+ /locus_tag="SARI_03220"
+ /note="Family of unknown function (DUF490); Region:
+ DUF490; pfam04357"
+ /db_xref="CDD:218042"
+ gene complement(3130011..3131744)
+ /locus_tag="SARI_03221"
+ CDS complement(3130011..3131744)
+ /locus_tag="SARI_03221"
+ /inference="protein motif:HMMPanther:IPR000184"
+ /inference="protein motif:HMMPfam:IPR000184"
+ /inference="protein motif:HMMPfam:IPR010827"
+ /inference="protein motif:ScanRegExp:IPR002345"
+ /note="'COG: COG0729 Outer membrane protein;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572199.1"
+ /db_xref="GI:161505087"
+ /db_xref="InterPro:IPR000184"
+ /db_xref="InterPro:IPR002345"
+ /db_xref="InterPro:IPR010827"
+ /translation="MPQIRQLCWVSLLCLSSSAVAANVRLKVEGLSGELEKNVRAQLS
+ TIQSDEVTPDRRFRARVDDAIREGLKALGYYEPTINFDLLPPPAKGRQVLIAKVTPGQ
+ PVLIGGTEVILRGGARTDKDYLALLKTRPAIGTVLNQGDYDNFKKSLTSVSLRKGYFD
+ SEFVKSQLGIALGRHQAFWDIDYNSGERYRFGHVTFEGSQIRDEYLQNLLPFKEGDEY
+ ESKDLAELNRRLSATGWFNSVVVAPEFEKSRKTKILPLKGVVSPRTENTIETGVGYST
+ DVGPRVKASWKKPWMNSYGHSLITSTSISAPEQVLDFSYKMPLLKNPLEQYYLVQGGF
+ KRTDLNDTEQDSTTLAVSRYWDLSSGWQRAINLRWSFDHFTQGNVTNTTMLFYPGVMI
+ SRTRSRGGLMPTWGDSQRYSVDYSNTAWGSDVDFSVLQAQNVWIRTLYDRHRFVMRAN
+ VGWIETGDFDKVPPDLRFFAGGDRSIRGYKYKSISPKYSDGNLKGASKLATGSLEYQY
+ NVTGKWWGAVFVDSGEAVSDIRRSDFKTGTGVGVRWESPVGPVKLDFAVPVGDKDEHG
+ LQFYIGLGPEL"
+ misc_feature complement(3130014..3131678)
+ /locus_tag="SARI_03221"
+ /note="Outer membrane protein [Cell envelope biogenesis,
+ outer membrane]; Region: COG0729"
+ /db_xref="CDD:223801"
+ misc_feature complement(3130983..3131180)
+ /locus_tag="SARI_03221"
+ /note="Surface antigen variable number repeat; Region:
+ Surf_Ag_VNR; pfam07244"
+ /db_xref="CDD:219346"
+ misc_feature complement(3130014..3130877)
+ /locus_tag="SARI_03221"
+ /note="Surface antigen; Region: Bac_surface_Ag; pfam01103"
+ /db_xref="CDD:216300"
+ gene 3131958..3132596
+ /locus_tag="SARI_03222"
+ CDS 3131958..3132596
+ /locus_tag="SARI_03222"
+ /inference="protein motif:BlastProDom:IPR002569"
+ /inference="protein motif:Gene3D:IPR002569"
+ /inference="protein motif:HMMPfam:IPR002569"
+ /inference="protein motif:HMMTigr:IPR002569"
+ /inference="protein motif:superfamily:IPR002569"
+ /inference="similar to AA sequence:SwissProt:Q8ZK71"
+ /note="this stereospecific enzymes reduces the S isomer of
+ methionine sulfoxide while MsrB reduces the R form;
+ provides protection against oxidative stress"
+ /codon_start=1
+ /transl_table=11
+ /product="methionine sulfoxide reductase A"
+ /protein_id="YP_001572200.1"
+ /db_xref="GI:161505088"
+ /db_xref="InterPro:IPR002569"
+ /translation="MSLFDKKHLVTQADALPGRNTPMPIATLHAVNEHSMTNVPAGME
+ IAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRVVYD
+ PAVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQSTAAHASRERFQSA
+ MADAGDERPITTEIAHATPFYYAEDEHQQYLHKNPYGYCGVGGIGVCLPPDA"
+ misc_feature 3131958..3132593
+ /locus_tag="SARI_03222"
+ /note="methionine sulfoxide reductase A; Provisional;
+ Region: PRK00058"
+ /db_xref="CDD:234604"
+ gene 3132779..3134122
+ /locus_tag="SARI_03223"
+ CDS 3132779..3134122
+ /locus_tag="SARI_03223"
+ /inference="protein motif:HMMPfam:IPR000644"
+ /inference="protein motif:HMMPfam:IPR002550"
+ /inference="protein motif:HMMPfam:IPR005170"
+ /inference="similar to AA sequence:INSD:AAV79963.1"
+ /note="'KEGG: hpa:HPAG1_1423 9.3e-42 putative integral
+ membrane protein with a TlyC-like hemolysin domain
+ K00088;
+ COG: COG1253 Hemolysins and related proteins containing
+ CBS domains;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572201.1"
+ /db_xref="GI:161505089"
+ /db_xref="InterPro:IPR000644"
+ /db_xref="InterPro:IPR002550"
+ /db_xref="InterPro:IPR005170"
+ /translation="MLNSIFIIFCLIAVSAFFSISEISLAASRKIKLKLLADEGSINA
+ QRVLKMQENPGMFFTVVQIGLNAVAILGGIVGDAAFSPVFSALFSHYMSPELSEQLSF
+ ILSFSLVTGLFILFADLTPKRIGMIAPEAVALRIINPMRFCLFLFRPLVWLFNGMANN
+ IFRLFKIPMVRKDDITSDDIYAVVEAGALAGVLRKQEHELIENVFELESRTVPSSMTS
+ RESIIWFDLHEDEQSLKNKVAEHPHSKFLVCNEDIDHIIGYVDSKDLLNRVLANQSMA
+ LNSGVQIRNTLIVPDTLTLSEALESFKTAGEDFAVIMNEYALVVGIITLNDVMTTLMG
+ DLVGQGLEEQIVARDENSWLIDGGTPIDDVMRVLDIDEFPQSGNYETIGGFMMFMLRK
+ IPKRTDSVKFSGYKFEVVDIDNYRIDQLLVTRLDNKSNVPAPKLPDAKGKEDGAA"
+ misc_feature 3132779..3134068
+ /locus_tag="SARI_03223"
+ /note="Hemolysins and related proteins containing CBS
+ domains [General function prediction only]; Region: TlyC;
+ COG1253"
+ /db_xref="CDD:224173"
+ misc_feature 3132791..3133318
+ /locus_tag="SARI_03223"
+ /note="Domain of unknown function DUF21; Region: DUF21;
+ pfam01595"
+ /db_xref="CDD:216595"
+ misc_feature 3133442..3133765
+ /locus_tag="SARI_03223"
+ /note="This cd contains two tandem repeats of the
+ cystathionine beta-synthase (CBS pair) domains associated
+ with the CorC_HlyC domain. CorC_HlyC is a transporter
+ associated domain. This small domain is found in Na+/H+
+ antiporters, in proteins involved in...; Region:
+ CBS_pair_CorC_HlyC_assoc; cd04590"
+ /db_xref="CDD:239963"
+ misc_feature 3133814..3134053
+ /locus_tag="SARI_03223"
+ /note="Transporter associated domain; Region: CorC_HlyC;
+ smart01091"
+ /db_xref="CDD:215020"
+ gene complement(3134207..3134413)
+ /locus_tag="SARI_03224"
+ CDS complement(3134207..3134413)
+ /locus_tag="SARI_03224"
+ /inference="protein motif:HMMPfam:IPR009491"
+ /inference="similar to AA sequence:INSD:CAD06885.1"
+ /note="'COG: NOG17567 non supervised orthologous group;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572202.1"
+ /db_xref="GI:161505090"
+ /db_xref="InterPro:IPR009491"
+ /translation="MKIFQRYNPLQVAKYVKILFRGRLYIKDVGAFEFDKGKILIPKV
+ RDKQHLSVMSEVNRQVMRLQTEMA"
+ misc_feature complement(3134225..3134413)
+ /locus_tag="SARI_03224"
+ /note="Protein of unknown function (DUF1107); Region:
+ DUF1107; pfam06526"
+ /db_xref="CDD:148248"
+ gene 3134739..3135296
+ /locus_tag="SARI_03225"
+ CDS 3134739..3135296
+ /locus_tag="SARI_03225"
+ /inference="protein motif:HMMTigr:IPR006513"
+ /inference="similar to AA sequence:REFSEQ:NP_463266.1"
+ /note="'COG: COG3054 Predicted transcriptional regulator;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="transcriptional regulator"
+ /protein_id="YP_001572203.2"
+ /db_xref="GI:448236272"
+ /db_xref="InterPro:IPR006513"
+ /translation="MILRKILAMSCLLLPIMTSAHNLEVNQRVPPVGIADRGELMLNK
+ DEFSYKNWNSAQLVGKVRVLLHIAGRTSAKAKNATLIETIKSARLPHDRYQTTTIVNT
+ DDAIPGSGMFVRSSIESNKKLYPWSQFIVDSNGIARNAWQLKEEGSAVIVLDKDGRVQ
+ WAKDGALTQQEVQQVADLLHKLLSK"
+ misc_feature 3134739..3135290
+ /locus_tag="SARI_03225"
+ /note="Predicted transcriptional regulator [General
+ function prediction only]; Region: COG3054"
+ /db_xref="CDD:225596"
+ gene complement(3135286..3136026)
+ /locus_tag="SARI_03226"
+ CDS complement(3135286..3136026)
+ /locus_tag="SARI_03226"
+ /inference="protein motif:BlastProDom:IPR000760"
+ /inference="protein motif:HMMPfam:IPR000760"
+ /inference="protein motif:HMMTigr:IPR006240"
+ /inference="protein motif:ScanRegExp:IPR000760"
+ /inference="similar to AA sequence:INSD:AAV79959.1"
+ /note="'catalyzes the formation of AMP from
+ adenosine-3',5'-bisphosphate'"
+ /codon_start=1
+ /transl_table=11
+ /product="adenosine-3'(2'),5'-bisphosphate nucleotidase"
+ /protein_id="YP_001572204.1"
+ /db_xref="GI:161505092"
+ /db_xref="InterPro:IPR000760"
+ /db_xref="InterPro:IPR006240"
+ /translation="MLEQVCQLARNAGDAIMQVYDGAKPMEYFRKQDDSPVTAADIAA
+ HTVILEGLRTLTPDIPVLSEEDPPAWEVRQHWQRYWLVDPLDGTKEFIKRNGEFTVNI
+ ALIEQGKPVLGVVYAPVLKVMYCAADGKAWKEECGVRKQIQVRDARPPLVVISRSHTD
+ DELTEYLQQLGEHQTTSIGSSLKFCLVAEGQAQLYPRFGPTNVWDTAAGHAIAVAAGA
+ HVHDWQGKTLDYTPRESFLNPGFRVTIY"
+ misc_feature complement(3135298..3136026)
+ /locus_tag="SARI_03226"
+ /note="CysQ, a
+ 3'-Phosphoadenosine-5'-phosphosulfate (PAPS)
+ 3'-phosphatase, is a bacterial member of the inositol
+ monophosphatase family. It has been proposed that CysQ
+ helps control intracellular levels of PAPS, which is an
+ intermediate in...; Region: CysQ; cd01638"
+ /db_xref="CDD:238816"
+ misc_feature complement(3135316..3136026)
+ /locus_tag="SARI_03226"
+ /note="Archaeal fructose-1,6-bisphosphatase and related
+ enzymes of inositol monophosphatase family [Carbohydrate
+ transport and metabolism]; Region: SuhB; COG0483"
+ /db_xref="CDD:223559"
+ misc_feature complement(order(3135412..3135417,3135442..3135444,
+ 3135478..3135480,3135553..3135555,3135562..3135564,
+ 3135757..3135759,3135763..3135780,3135832..3135837,
+ 3135904..3135906))
+ /locus_tag="SARI_03226"
+ /note="active site"
+ /db_xref="CDD:238816"
+ gene complement(3136069..3136236)
+ /locus_tag="SARI_03227"
+ CDS complement(3136069..3136236)
+ /locus_tag="SARI_03227"
+ /inference="protein motif:ScanRegExp:IPR010916"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572205.1"
+ /db_xref="GI:161505093"
+ /db_xref="InterPro:IPR010916"
+ /translation="MKPDIGLTIDLAGEGGTAPSDRFFAIVHRTVNHAMKRIIKTADS
+ ITVVGTLNDRV"
+ gene 3136299..3138242
+ /gene="cpdB"
+ /locus_tag="SARI_03228"
+ CDS 3136299..3138242
+ /gene="cpdB"
+ /locus_tag="SARI_03228"
+ /inference="protein motif:Gene3D:IPR008334"
+ /inference="protein motif:HMMPanther:IPR006179"
+ /inference="protein motif:HMMPfam:IPR004843"
+ /inference="protein motif:HMMPfam:IPR008334"
+ /inference="protein motif:HMMTigr:IPR006294"
+ /inference="protein motif:ScanRegExp:IPR006146"
+ /inference="protein motif:superfamily:IPR008334"
+ /note="'periplasmic enzyme; functions during ribonucleic
+ acid degradation; 2',3'-cyclic nucleotides are first
+ converted to 3'-nucleotide and then cleaved to yield a
+ ribonucleotide and a phosphate'"
+ /codon_start=1
+ /transl_table=11
+ /product="bifunctional 2',3'-cyclic nucleotide
+ 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor
+ protein"
+ /protein_id="YP_001572206.1"
+ /db_xref="GI:161505094"
+ /db_xref="InterPro:IPR004843"
+ /db_xref="InterPro:IPR006146"
+ /db_xref="InterPro:IPR006179"
+ /db_xref="InterPro:IPR006294"
+ /db_xref="InterPro:IPR008334"
+ /translation="MIKFSATLLATLIAASVNAATVDLRIMETTDLHSNMMDFDYYKD
+ TATEKFGLVRTASLIQAARNEVKNSVLVDNGDLIQGSPLGDYMAAKGLKEGDVHPVYK
+ ALNTLDYAVGNLGNHEFNYGLNYLHNALAGAKFPYVNANITDVKTQKPLFTPYLIKET
+ NVIDKDGNPQTLKIGYIGFVPPQIMIWDKANLSGKVTVNDITETARKYVPEMREKGAD
+ IVVVIAHSGLSADPYHSMAENSVYYLSEVPGVDAIMFGHAHAVFPGKDFANIKGADIA
+ KGTLNGIPAVMPGMWGDHLGVVDLVLNNDSGKWQVTQAKAEARPIYDAAAKKSLAAED
+ SKLVGILKADHDATREFVSKPIGKSADNMYSYLALVQDDPTVQVVNNAQKAYVEHFIQ
+ GDPDLAKLPVLSAAAPFKVGGRKNDPASFVEVEKGQLTFRNAADLYLYPNTLVVVKAS
+ GKEVKEWLECSAGQFKQIDIHSNKPQSLINWDGFRTYNFDVIDGVNYQIDVSQPARYD
+ GECQMVNPQAERIKNLTFNGKPVDPNATFLVATNNYRAYGGKFAGTGDSHIAFASPDE
+ NRAVLAAWIGAESKRAGEIHPAADNNWRLAPIHSNTDLDIRFETSPADKAAAFIKEKG
+ QYPMNKVAADDIGFAIYQVDLSK"
+ misc_feature 3136299..3138239
+ /gene="cpdB"
+ /locus_tag="SARI_03228"
+ /note="bifunctional 2',3'-cyclic nucleotide
+ 2'-phosphodiesterase/3'-nucleotidase periplasmic
+ precursor protein; Reviewed; Region: cpdB; PRK09420"
+ /db_xref="CDD:236506"
+ misc_feature 3136368..3137261
+ /gene="cpdB"
+ /locus_tag="SARI_03228"
+ /note="Escherichia coli CpdB and related proteins,
+ N-terminal metallophosphatase domain; Region: MPP_CpdB_N;
+ cd07410"
+ /db_xref="CDD:163653"
+ misc_feature order(3136389..3136391,3136395..3136397,3136524..3136526,
+ 3136644..3136649,3136971..3136973,3137067..3137069,
+ 3137073..3137075)
+ /gene="cpdB"
+ /locus_tag="SARI_03228"
+ /note="active site"
+ /db_xref="CDD:163653"
+ misc_feature order(3136389..3136391,3136395..3136397,3136524..3136526,
+ 3136644..3136646,3136971..3136973,3137067..3137069,
+ 3137073..3137075)
+ /gene="cpdB"
+ /locus_tag="SARI_03228"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:163653"
+ misc_feature 3137406..3137945
+ /gene="cpdB"
+ /locus_tag="SARI_03228"
+ /note="5'-nucleotidase, C-terminal domain; Region:
+ 5_nucleotid_C; pfam02872"
+ /db_xref="CDD:217260"
+ gene complement(3138295..3138681)
+ /locus_tag="SARI_03229"
+ CDS complement(3138295..3138681)
+ /locus_tag="SARI_03229"
+ /inference="protein motif:BlastProDom:IPR002577"
+ /inference="protein motif:HMMPfam:IPR002577"
+ /inference="similar to AA sequence:INSD:CAD06881.1"
+ /note="'COG: COG1733 Predicted transcriptional regulators;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572207.1"
+ /db_xref="GI:161505095"
+ /db_xref="InterPro:IPR002577"
+ /translation="MRAHSLSRRLREGNLFAEQCPSREVLKHVTSRWGVLILVALRDG
+ THRFSDLRRKMGGVSEKMLAQSLQALEQDGFLNRVSYPVVPPHVEYSLTPLGEQVSDK
+ VAALADWIELNLPQVLALRDRQPDGC"
+ misc_feature complement(3138313..3138642)
+ /locus_tag="SARI_03229"
+ /note="Predicted transcriptional regulators
+ [Transcription]; Region: COG1733"
+ /db_xref="CDD:224647"
+ misc_feature complement(3138331..3138600)
+ /locus_tag="SARI_03229"
+ /note="HxlR-like helix-turn-helix; Region: HxlR;
+ pfam01638"
+ /db_xref="CDD:201897"
+ gene 3138769..3139617
+ /locus_tag="SARI_03230"
+ CDS 3138769..3139617
+ /locus_tag="SARI_03230"
+ /inference="protein motif:HMMPfam:IPR008030"
+ /inference="similar to AA sequence:INSD:AAL23221.1"
+ /note="'KEGG: eci:UTI89_C4820 1.2e-112 ytfG; hypothetical
+ protein YtfG;
+ COG: COG0702 Predicted nucleoside-diphosphate-sugar
+ epimerases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572208.1"
+ /db_xref="GI:161505096"
+ /db_xref="InterPro:IPR008030"
+ /translation="MIAITGATGQLGQHVIENLLKTTLASHLVAIVRNPKKAAPLSQR
+ GIAVRQADYANEAALTTALQGVDKLLLISSSEVGQRTAQHRNVIQAAIAAKVKFIAYT
+ SLLHADKSPLALADEHIETEQMLAESGIPHTLLRNGWYTENYLASVPAALKHGVFIGA
+ AGEGKIASAMRADYAAAAARVISEEGHAGNVYELAGDDAWTLSQLADELTQQSGKKIV
+ YQNLSESDFAAALKGAGLPDGLADMLANSDIGAAKGGLFDDSHTLRKLIGRPTTTLTE
+ SLRSVL"
+ misc_feature 3138769..3139575
+ /locus_tag="SARI_03230"
+ /note="Predicted nucleoside-diphosphate-sugar epimerases
+ [Cell envelope biogenesis, outer membrane / Carbohydrate
+ transport and metabolism]; Region: COG0702"
+ /db_xref="CDD:223774"
+ misc_feature 3138772..3139590
+ /locus_tag="SARI_03230"
+ /note="triphenylmethane reductase (TMR)-like proteins,
+ NMRa-like, atypical (a) SDRs; Region: TMR_SDR_a; cd05269"
+ /db_xref="CDD:187578"
+ misc_feature order(3138784..3138786,3138790..3138801,3138865..3138870,
+ 3138877..3138879,3138919..3138930,3138982..3138993,
+ 3139180..3139188,3139279..3139281)
+ /locus_tag="SARI_03230"
+ /note="NADP binding site [chemical binding]; other site"
+ /db_xref="CDD:187578"
+ gene 3139698..3140663
+ /locus_tag="SARI_03231"
+ CDS 3139698..3140663
+ /locus_tag="SARI_03231"
+ /inference="protein motif:HMMPfam:IPR000620"
+ /inference="similar to AA sequence:REFSEQ:NP_463261.1"
+ /note="'KEGG: reh:H16_A3257 0.0011 pilD; type IV pilus
+ prepilin leader peptidase 1;
+ COG: COG0697 Permeases of the drug/metabolite transporter
+ (DMT) superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572209.1"
+ /db_xref="GI:161505097"
+ /db_xref="InterPro:IPR000620"
+ /translation="MISGVLYALLAGLMWGLIFVGPLIVPDYPALLQSMGRYLALGLI
+ ALPIAWLGRTRLRQLTRKDWSTALSLTLMGNLIYYACLASAIQRTGAPVSTMIIGTLP
+ VVIPVFANVLYSQRDGRLSWLRLAPALAFIGFGLLCVNIAELSQGLSNVSGWRYGSGI
+ VLALISVACWAWYALRNARWLRENPDKHPMMWATAQALVTLPVSLIGYAAVCLWLSIQ
+ KPLFTLPFGPHPALFIGLMIAIAVLCSWVGALCWNIASQKLPTVILGPLIVFETLAGL
+ LYTFILRQEIPPLLTVSGIALLVAGVVIAVRAKPKKATVVPVTKR"
+ misc_feature 3139698..3140573
+ /locus_tag="SARI_03231"
+ /note="Permeases of the drug/metabolite transporter (DMT)
+ superfamily [Carbohydrate transport and metabolism / Amino
+ acid transport and metabolism / General function
+ prediction only]; Region: RhaT; COG0697"
+ /db_xref="CDD:223769"
+ misc_feature 3139734..3140099
+ /locus_tag="SARI_03231"
+ /note="EamA-like transporter family; Region: EamA;
+ pfam00892"
+ /db_xref="CDD:216178"
+ gene 3140745..3141428
+ /locus_tag="SARI_03232"
+ CDS 3140745..3141428
+ /locus_tag="SARI_03232"
+ /inference="protein motif:HMMPfam:IPR007500"
+ /inference="protein motif:HMMPfam:IPR012312"
+ /inference="similar to AA sequence:INSD:AAV79954.1"
+ /note="Involved in anaerobic NO protection and iron
+ metabolism"
+ /codon_start=1
+ /transl_table=11
+ /product="iron-sulfur cluster repair di-iron protein"
+ /protein_id="YP_001572210.1"
+ /db_xref="GI:161505098"
+ /db_xref="InterPro:IPR007500"
+ /db_xref="InterPro:IPR012312"
+ /translation="MANEVTAMAYRDQPLGELALSIPRASSLFRQYDMDYCCGGKQTL
+ ARAAARNDVDIDVIEAQLAQLAEQPIEKDWRAVPLADIIDHIVVRYHDRHREQLPELI
+ LQATKVERVHADKPNVPRGLTKYLTALHEELSSHMIKEEQILFPMIKQGMGRQATGPI
+ NVMESEHDEAGELVDVIKHVTQNVTPPPEACTTWKAMYNGINEMIDDLMEHISLENNV
+ LFPRALAGE"
+ misc_feature 3140766..3141425
+ /locus_tag="SARI_03232"
+ /note="iron-sulfur cluster repair di-iron protein;
+ Provisional; Region: PRK10992"
+ /db_xref="CDD:236812"
+ misc_feature 3140775..3140942
+ /locus_tag="SARI_03232"
+ /note="Domain of Unknown function (DUF542); Region:
+ ScdA_N; pfam04405"
+ /db_xref="CDD:190972"
+ misc_feature 3141015..3141407
+ /locus_tag="SARI_03232"
+ /note="Hemerythrin-like domain; Region: Hr-like; cd12108"
+ /db_xref="CDD:213983"
+ misc_feature order(3141015..3141017,3141150..3141155,3141162..3141164,
+ 3141243..3141245,3141375..3141377,3141387..3141389)
+ /locus_tag="SARI_03232"
+ /note="Fe binding site [ion binding]; other site"
+ /db_xref="CDD:213983"
+ gene complement(3141494..3142903)
+ /locus_tag="SARI_03233"
+ CDS complement(3141494..3142903)
+ /locus_tag="SARI_03233"
+ /inference="protein motif:HMMPanther:IPR002293"
+ /inference="protein motif:HMMPfam:IPR004841"
+ /inference="protein motif:ScanRegExp:IPR004840"
+ /inference="similar to AA sequence:REFSEQ:NP_463259.1"
+ /note="'involved in the transport across the cytoplasmic
+ membrane of D-alanine, D-serine and glycine'"
+ /codon_start=1
+ /transl_table=11
+ /product="D-alanine/D-serine/glycine permease"
+ /protein_id="YP_001572211.1"
+ /db_xref="GI:161505099"
+ /db_xref="InterPro:IPR002293"
+ /db_xref="InterPro:IPR004840"
+ /db_xref="InterPro:IPR004841"
+ /translation="MVDQVKVAADEQATAEQSLRRNLTNRHIQLIAIGGAIGTGLFMG
+ SGKTISLAGPSIIFVYMIIGFMLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYF
+ TGWTYWFCWVVTGMADVVAITAYAQFWFPGLSDWVASLAVVILLLSLNLATVKMFGEM
+ EFWFAMVKIVAIVALIVVGLVMIAMHFKSPTGVEASFAHLWNDGGWFPKGISGFFAGF
+ QIAVFAFVGIELVGTTAAETKDPEKSLPRAINSIPIRIIMFYVFALIVIMSVTPWSSV
+ VPNKSPFVELFMLVGLPAAASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKA
+ FAKLSKRAVPAKGLTFSCICLLGGVVMLMVNPSVIGAFTMITTVSAILFMFVWTIILC
+ SYLAYRKKRPHLHEKSIYKMPLGKLMCWVCMAFFVFVLVLLTLEDDTRQALMVTPLWF
+ IALGLGWLLIGKKRMAGMR"
+ misc_feature complement(3141497..3142900)
+ /locus_tag="SARI_03233"
+ /note="D-alanine/D-serine/glycine permease; Provisional;
+ Region: PRK11049"
+ /db_xref="CDD:236830"
+ gene complement(3143190..3143852)
+ /locus_tag="SARI_03234"
+ CDS complement(3143190..3143852)
+ /locus_tag="SARI_03234"
+ /inference="protein motif:BlastProDom:IPR000774"
+ /inference="protein motif:HMMPfam:IPR000774"
+ /inference="protein motif:HMMPfam:IPR001179"
+ /inference="similar to AA sequence:REFSEQ:NP_463258.1"
+ /note="FKBP-type; rotamase; catalyzes the cis-trans
+ isomerization of proline imidic peptide bonds in
+ oligopeptides"
+ /codon_start=1
+ /transl_table=11
+ /product="peptidyl-prolyl cis-trans isomerase"
+ /protein_id="YP_001572212.1"
+ /db_xref="GI:161505100"
+ /db_xref="InterPro:IPR000774"
+ /db_xref="InterPro:IPR001179"
+ /translation="MLPATFLLSDKGKIMATPTFDTIEAQASYGIGLQVGQQLSESGL
+ EGLLPEALVAGIADALEGKHPAVPVDVVHRALREIHERADAVRRERFKAMAAEGVKYL
+ EENREKDGVNSTESGLQFRVLTQGEGEIPARTDRVRVHYTGKLIDGTVFDSSVARGEP
+ AEFPVNGVIAGWIEALTLMPVGSKWELTIPQELAYGERGAGASIPPFSTLVFEVELLE
+ IL"
+ misc_feature complement(3143193..3143810)
+ /locus_tag="SARI_03234"
+ /note="peptidyl-prolyl cis-trans isomerase; Provisional;
+ Region: PRK11570"
+ /db_xref="CDD:183207"
+ misc_feature complement(3143487..3143810)
+ /locus_tag="SARI_03234"
+ /note="Domain amino terminal to FKBP-type peptidyl-prolyl
+ isomerase; Region: FKBP_N; pfam01346"
+ /db_xref="CDD:216447"
+ misc_feature complement(3143202..3143468)
+ /locus_tag="SARI_03234"
+ /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
+ Region: FKBP_C; pfam00254"
+ /db_xref="CDD:215821"
+ gene 3144028..3144663
+ /locus_tag="SARI_03235"
+ CDS 3144028..3144663
+ /locus_tag="SARI_03235"
+ /inference="protein motif:HMMPfam:IPR007340"
+ /inference="protein motif:HMMPfam:IPR013731"
+ /inference="similar to AA sequence:REFSEQ:NP_463257.1"
+ /note="'KEGG: pen:PSEEN0463 1.9e-07 peptidase, M23/M37
+ family K01423;
+ COG: COG3061 Cell envelope opacity-associated protein A;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572213.1"
+ /db_xref="GI:161505101"
+ /db_xref="InterPro:IPR007340"
+ /db_xref="InterPro:IPR013731"
+ /translation="MPGHFELKPTLAKIWHAPDNFRILEPLPPMHRRGIIIAAIVMVI
+ GFLLPASETSDVPVVTREAQLDLQSSSRAPDEAQIQAQLVAPQNAPDQAAPVAPEPIQ
+ EGQPEEQSQPQTQPFQQDSGIGQQWRSYRVESGKTLAQLFRDHGLPPTDVYAMAQVEG
+ AGKPLSNLKNGQMIKIRQNASGVVTGLTIDGDNGQQVLFTRQPDGSFIRAQ"
+ misc_feature 3144028..3144660
+ /locus_tag="SARI_03235"
+ /note="Cell envelope opacity-associated protein A [Cell
+ envelope biogenesis, outer membrane]; Region: OapA;
+ COG3061"
+ /db_xref="CDD:225603"
+ misc_feature 3144403..3144660
+ /locus_tag="SARI_03235"
+ /note="Opacity-associated protein A LysM-like domain;
+ Region: OapA; pfam04225"
+ /db_xref="CDD:113015"
+ unsure 3144199..3144476
+ /locus_tag="SARI_03235"
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(3144713..3145639)
+ /locus_tag="SARI_03236"
+ CDS complement(3144713..3145639)
+ /locus_tag="SARI_03236"
+ /inference="protein motif:HMMPfam:IPR000620"
+ /inference="similar to AA sequence:REFSEQ:YP_219256.1"
+ /note="'COG: COG0697 Permeases of the drug/metabolite
+ transporter (DMT) superfamily;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572214.1"
+ /db_xref="GI:161505102"
+ /db_xref="InterPro:IPR000620"
+ /translation="MDTQRQASPFARKNVVYLCAAFCCLLWGSAYPAIKSGYDLFQIA
+ TDDIPSKIVFAGYRFLFAGGLLLLFALLQRKPIGRFRPRQFGQLTLLGLTQTSLQYLF
+ FYIGLAFTTGVKGSIMNATGTFFSVLLAHFIYQNDRLSYNKTLGCILGFAGVMAVNVS
+ SGLDFSFNLPGEGSVVLAAFILSVATLYGKRLSQTVDPMVMTGYQLGIGGLVLVIGGY
+ VFGGTLTIHGFSSVAILGYLTLLSSVAFALWSILLKYNRVGMIAPFNFLIPVSGATLS
+ AIFLGENILQWKYMVALVLVCSGIWWVNQVKR"
+ misc_feature complement(3144716..>3145336)
+ /locus_tag="SARI_03236"
+ /note="Permeases of the drug/metabolite transporter (DMT)
+ superfamily [Carbohydrate transport and metabolism / Amino
+ acid transport and metabolism / General function
+ prediction only]; Region: RhaT; COG0697"
+ /db_xref="CDD:223769"
+ misc_feature complement(3144728..3145102)
+ /locus_tag="SARI_03236"
+ /note="EamA-like transporter family; Region: EamA;
+ pfam00892"
+ /db_xref="CDD:216178"
+ gene complement(3145788..3146237)
+ /gene="rplI"
+ /locus_tag="SARI_03238"
+ CDS complement(3145788..3146237)
+ /gene="rplI"
+ /locus_tag="SARI_03238"
+ /inference="protein motif:HMMPfam:IPR000244"
+ /inference="protein motif:HMMTigr:IPR000244"
+ /inference="protein motif:ScanRegExp:IPR000244"
+ /inference="protein motif:superfamily:IPR000244"
+ /inference="protein motif:superfamily:IPR009027"
+ /inference="similar to AA sequence:INSD:CAD06871.1"
+ /note="in Escherichia coli this protein is wrapped around
+ the base of the L1 stalk"
+ /codon_start=1
+ /transl_table=11
+ /product="50S ribosomal protein L9"
+ /protein_id="YP_001572215.1"
+ /db_xref="GI:161505104"
+ /db_xref="InterPro:IPR000244"
+ /db_xref="InterPro:IPR009027"
+ /translation="MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNV
+ EYFEARRAELEAKLADVLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIADA
+ VTAAGVDVAKSEVRLPNGVLRTTGEHEVNFQVHSEVFAKVIINVVAE"
+ misc_feature complement(3145791..3146237)
+ /gene="rplI"
+ /locus_tag="SARI_03238"
+ /note="50S ribosomal protein L9; Reviewed; Region: rplI;
+ PRK00137"
+ /db_xref="CDD:234659"
+ misc_feature complement(3146097..3146237)
+ /gene="rplI"
+ /locus_tag="SARI_03238"
+ /note="Ribosomal protein L9, N-terminal domain; Region:
+ Ribosomal_L9_N; pfam01281"
+ /db_xref="CDD:201708"
+ misc_feature complement(3145791..3146009)
+ /gene="rplI"
+ /locus_tag="SARI_03238"
+ /note="Ribosomal protein L9, C-terminal domain; Region:
+ Ribosomal_L9_C; pfam03948"
+ /db_xref="CDD:146531"
+ gene 3145833..3146264
+ /locus_tag="SARI_03237"
+ CDS 3145833..3146264
+ /locus_tag="SARI_03237"
+ /inference="protein motif:ScanRegExp:IPR001400"
+ /inference="similar to AA sequence:INSD:EAY48239.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572216.1"
+ /db_xref="GI:161505103"
+ /db_xref="InterPro:IPR001400"
+ /translation="MNLEVHFVFTSGTQNAVRQTNFALSHVNASRSNSVSDVASTDGT
+ EQFTFVACFRRDSNGFQGVDFLCACIRSSQNVSQFSFQFSATCFEVFNVFLGSRNSFT
+ LWYQEVTSIARFNVNLITQATQVCYFIKQNNLHYLILSKSY"
+ gene complement(3146279..3146506)
+ /gene="rpsR"
+ /locus_tag="SARI_03239"
+ CDS complement(3146279..3146506)
+ /gene="rpsR"
+ /locus_tag="SARI_03239"
+ /inference="protein motif:BlastProDom:IPR001648"
+ /inference="protein motif:Gene3D:IPR001648"
+ /inference="protein motif:HMMPfam:IPR001648"
+ /inference="protein motif:HMMTigr:IPR001648"
+ /inference="protein motif:ScanRegExp:IPR001648"
+ /inference="protein motif:superfamily:IPR001648"
+ /inference="similar to AA sequence:INSD:ABP59061.1"
+ /note="binds as a heterodimer with protein S6 to the
+ central domain of the 16S rRNA; helps stabilize the
+ platform of the 30S subunit"
+ /codon_start=1
+ /transl_table=11
+ /product="30S ribosomal protein S18"
+ /protein_id="YP_001572217.1"
+ /db_xref="GI:161505105"
+ /db_xref="InterPro:IPR001648"
+ /translation="MARYFRRRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRI
+ TGTRAKYQRQLARAIKRARYLSLLPYTDRHQ"
+ misc_feature complement(3146291..3146506)
+ /gene="rpsR"
+ /locus_tag="SARI_03239"
+ /note="30S ribosomal protein S18; Reviewed; Region: rpsR;
+ PRK00391"
+ /db_xref="CDD:178997"
+ gene complement(3146511..3146825)
+ /locus_tag="SARI_03240"
+ CDS complement(3146511..3146825)
+ /locus_tag="SARI_03240"
+ /inference="protein motif:Gene3D:IPR012340"
+ /inference="protein motif:HMMPfam:IPR000424"
+ /inference="protein motif:superfamily:IPR008994"
+ /inference="similar to AA sequence:INSD:AAL23212.1"
+ /note="binds single-stranded DNA at the primosome assembly
+ site"
+ /codon_start=1
+ /transl_table=11
+ /product="primosomal replication protein N"
+ /protein_id="YP_001572218.1"
+ /db_xref="GI:161505106"
+ /db_xref="InterPro:IPR000424"
+ /db_xref="InterPro:IPR008994"
+ /db_xref="InterPro:IPR012340"
+ /translation="MTNRLALSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHR
+ QAWCQMPVIVSGHENQAITHSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIELIDS
+ GD"
+ misc_feature complement(3146526..3146807)
+ /locus_tag="SARI_03240"
+ /note="SSB_OBF: A subfamily of OB folds similar to the OB
+ fold of ssDNA-binding protein (SSB). SSBs bind with high
+ affinity to ssDNA. They bind to and protect ssDNA
+ intermediates during DNA metabolic pathways. All bacterial
+ and eukaryotic SSBs studied to date...; Region: SSB_OBF;
+ cd04496"
+ /db_xref="CDD:239942"
+ misc_feature complement(order(3146556..3146558,3146586..3146588,
+ 3146613..3146615,3146676..3146678,3146682..3146684,
+ 3146721..3146729,3146802..3146807))
+ /locus_tag="SARI_03240"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:239942"
+ misc_feature complement(order(3146547..3146549,3146553..3146555,
+ 3146580..3146585,3146589..3146591,3146595..3146597,
+ 3146619..3146624,3146661..3146663,3146667..3146669,
+ 3146673..3146675,3146679..3146681,3146685..3146690,
+ 3146718..3146723,3146742..3146744,3146772..3146774,
+ 3146790..3146798))
+ /locus_tag="SARI_03240"
+ /note="ssDNA binding site [nucleotide binding]; other
+ site"
+ /db_xref="CDD:239942"
+ misc_feature complement(order(3146532..3146534,3146601..3146603,
+ 3146607..3146609,3146613..3146615))
+ /locus_tag="SARI_03240"
+ /note="tetramer (dimer of dimers) interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:239942"
+ gene complement(3146832..3147227)
+ /gene="rpsF"
+ /locus_tag="SARI_03242"
+ CDS complement(3146832..3147227)
+ /gene="rpsF"
+ /locus_tag="SARI_03242"
+ /inference="protein motif:BlastProDom:IPR000529"
+ /inference="protein motif:HMMPfam:IPR000529"
+ /inference="protein motif:HMMTigr:IPR000529"
+ /inference="protein motif:ScanRegExp:IPR000529"
+ /inference="similar to AA sequence:SwissProt:P66594"
+ /note="'binds cooperatively with S18 to the S15-16S
+ complex, allowing platform assembly to continue with S11
+ and S21'"
+ /codon_start=1
+ /transl_table=11
+ /product="30S ribosomal protein S6"
+ /protein_id="YP_001572219.1"
+ /db_xref="GI:161505108"
+ /db_xref="InterPro:IPR000529"
+ /translation="MRHYEIVFMVHPDQSEQVPGMIERYSAAITGAEGKIHRLEDWGR
+ RQLAYPINKLHKAHYVLMNVEAPQEVIDELETTFRFNDAVIRSMIMRTKHAVTEASPM
+ VKAKDERRERRDDFANETADDAEAGDSEE"
+ misc_feature complement(3146910..3147227)
+ /gene="rpsF"
+ /locus_tag="SARI_03242"
+ /note="30S ribosomal protein S6; Reviewed; Region: rpsF;
+ PRK00453"
+ /db_xref="CDD:179034"
+ gene 3146946..3147329
+ /locus_tag="SARI_03241"
+ CDS 3146946..3147329
+ /locus_tag="SARI_03241"
+ /inference="similar to AA sequence:REFSEQ:ZP_01699650.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572220.1"
+ /db_xref="GI:161505107"
+ /translation="MLSTHNHAADNGIVEAEGSFQLIDHFLRRFNVHQNIVRFVQFVD
+ RVSQLTAAPVFQTVDLAFCASDGGRVTLDHARNLFALVRMDHKNDFVMTHRIAPYGLF
+ SLLSGSAAAHGGKERVKGRLKNDAL"
+ gene complement(3147298..3147534)
+ /locus_tag="SARI_03243"
+ CDS complement(3147298..3147534)
+ /locus_tag="SARI_03243"
+ /inference="similar to AA sequence:REFSEQ:YP_153256.1"
+ /note="'COG: NOG35248 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572221.1"
+ /db_xref="GI:161505109"
+ /translation="MMYAAMFKKPCVAKSALTTLPTSLPEQAVYSGVRYEVNISAAKC
+ DGIGVTFGTINNRTITLSLPAGASIITRHFSADL"
+ gene 3147697..3147972
+ /locus_tag="SARI_03244"
+ CDS 3147697..3147972
+ /locus_tag="SARI_03244"
+ /inference="protein motif:HMMPfam:IPR010854"
+ /inference="similar to AA sequence:REFSEQ:YP_219250.1"
+ /note="'COG: NOG11317 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572222.1"
+ /db_xref="GI:161505110"
+ /db_xref="InterPro:IPR010854"
+ /translation="MRARIMLFLAALLLSVTATAAIELNNHQARNMDDVRSLGVIYIN
+ HHFATESEAHLALNEEAEARNAMYYHVILIREPGSNGNIHASADIYR"
+ misc_feature 3147799..3147969
+ /locus_tag="SARI_03244"
+ /note="Protein of unknown function (DUF1471); Region:
+ DUF1471; pfam07338"
+ /db_xref="CDD:219380"
+ gene complement(3148102..3148788)
+ /gene="sgaE"
+ /locus_tag="SARI_03245"
+ CDS complement(3148102..3148788)
+ /gene="sgaE"
+ /locus_tag="SARI_03245"
+ /inference="protein motif:Gene3D:IPR001303"
+ /inference="protein motif:HMMPfam:IPR001303"
+ /inference="protein motif:superfamily:IPR001303"
+ /inference="similar to AA sequence:REFSEQ:NP_458822.1"
+ /note="catalyzes the isomerization of L-ribulose
+ 5-phosphate to D-xylulose 5-phosphate in the anaerobic
+ catabolism of L-ascorbate; links the arabinose metabolic
+ pathway to the pentose phosphate pathway and allows the
+ bacteria to use arabinose as an energy source"
+ /codon_start=1
+ /transl_table=11
+ /product="L-ribulose-5-phosphate 4-epimerase"
+ /protein_id="YP_001572223.1"
+ /db_xref="GI:161505111"
+ /db_xref="InterPro:IPR001303"
+ /translation="MQKLKQQVFDANMDLPRYGLVTFTWGNVSAIDRQRGLVAIKPSG
+ VAYETMKVDDMVVVDMDGKVVEGRYRPSSDTATHLALYQRYPSLGGVVHTHSTHATAW
+ AQAGKAIPALGTTHADYFFGDIPCTRALSEEEVQGEYELNTGKVIIETLGDVEPLHTP
+ GIVVYQHGPFAWGKDAHDAVHNAVVMEEVARMAWIARGINPGLNPIDDYLMNKHFMRK
+ HGPNAYYGQK"
+ misc_feature complement(3148105..3148785)
+ /gene="sgaE"
+ /locus_tag="SARI_03245"
+ /note="L-ribulose-5-phosphate 4-epimerase; Reviewed;
+ Region: araD; PRK08193"
+ /db_xref="CDD:236181"
+ misc_feature complement(3148132..3148785)
+ /gene="sgaE"
+ /locus_tag="SARI_03245"
+ /note="Class II Aldolase and Adducin head (N-terminal)
+ domain. Aldolases are ubiquitous enzymes catalyzing
+ central steps of carbohydrate metabolism. Based on
+ enzymatic mechanisms, this superfamily has been divided
+ into two distinct classes (Class I and II); Region:
+ Aldolase_II; cd00398"
+ /db_xref="CDD:238232"
+ misc_feature complement(order(3148144..3148146,3148204..3148206,
+ 3148225..3148227,3148237..3148239,3148258..3148260,
+ 3148291..3148293,3148402..3148404,3148444..3148449,
+ 3148453..3148455,3148474..3148482,3148495..3148500,
+ 3148504..3148506,3148642..3148647,3148651..3148653,
+ 3148723..3148725,3148747..3148749,3148759..3148761))
+ /gene="sgaE"
+ /locus_tag="SARI_03245"
+ /note="intersubunit interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238232"
+ misc_feature complement(order(3148288..3148290,3148504..3148506,
+ 3148510..3148512,3148567..3148575,3148657..3148662,
+ 3148708..3148710))
+ /gene="sgaE"
+ /locus_tag="SARI_03245"
+ /note="active site"
+ /db_xref="CDD:238232"
+ misc_feature complement(order(3148288..3148290,3148504..3148506,
+ 3148510..3148512))
+ /gene="sgaE"
+ /locus_tag="SARI_03245"
+ /note="Zn2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238232"
+ gene complement(3148788..3149642)
+ /locus_tag="SARI_03247"
+ CDS complement(3148788..3149642)
+ /locus_tag="SARI_03247"
+ /inference="protein motif:HMMPfam:IPR012307"
+ /inference="protein motif:HMMTigr:IPR004560"
+ /inference="similar to AA sequence:REFSEQ:NP_463248.1"
+ /note="UlaE; catalyzes the epimerization of
+ L-ribulose-5-phosphate into L-xylulose-5-phosphate; part
+ of the anaerobic L-ascorbate degradation pathway"
+ /codon_start=1
+ /transl_table=11
+ /product="L-xylulose 5-phosphate 3-epimerase"
+ /protein_id="YP_001572224.1"
+ /db_xref="GI:161505113"
+ /db_xref="InterPro:IPR004560"
+ /db_xref="InterPro:IPR012307"
+ /translation="MLSKQIPLGIYEKALPAGECWLERLRLAKTLGFDFVEMSVDETD
+ ARLARLDWSREQRLALVNAVAETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKA
+ IQFAQDVGIRVIQLAGYDVYYQQANDETRSRFRDGLKESVDMASRAQVTLAMEIMDYP
+ LMNSISKALGYAHYLNNPWFQLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKDAKPG
+ VFKNVPFGEGVVDFERCFATLRQSGYCGPYLIEMWSETAENPAAEVAKARDWVKARMA
+ SVGLVEAV"
+ misc_feature complement(3148800..3149642)
+ /locus_tag="SARI_03247"
+ /note="L-xylulose 5-phosphate 3-epimerase; Reviewed;
+ Region: PRK13209"
+ /db_xref="CDD:237307"
+ misc_feature complement(3148821..3149621)
+ /locus_tag="SARI_03247"
+ /note="AP endonuclease family 2; These endonucleases play
+ a role in DNA repair. Cleave phosphodiester bonds at
+ apurinic or apyrimidinic sites; the alignment also
+ contains hexulose-6-phosphate isomerases, enzymes that
+ catalyze the epimerization of...; Region: AP2Ec; cd00019"
+ /db_xref="CDD:237986"
+ misc_feature complement(order(3148851..3148853,3148890..3148892,
+ 3149397..3149399,3149526..3149528,3149610..3149612))
+ /locus_tag="SARI_03247"
+ /note="AP (apurinic/apyrimidinic) site pocket; other site"
+ /db_xref="CDD:237986"
+ misc_feature complement(order(3149385..3149387,3149394..3149399,
+ 3149505..3149519))
+ /locus_tag="SARI_03247"
+ /note="DNA interaction; other site"
+ /db_xref="CDD:237986"
+ misc_feature complement(order(3148890..3148892,3148977..3148979,
+ 3148983..3148985,3149010..3149012,3149079..3149081,
+ 3149088..3149090,3149178..3149180,3149283..3149285,
+ 3149406..3149408))
+ /locus_tag="SARI_03247"
+ /note="Metal-binding active site; metal-binding site"
+ /db_xref="CDD:237986"
+ gene 3149628..3150296
+ /locus_tag="SARI_03246"
+ CDS 3149628..3150296
+ /locus_tag="SARI_03246"
+ /inference="similar to AA sequence:INSD:EAY48237.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572225.1"
+ /db_xref="GI:161505112"
+ /translation="MFRQHSRSLAPQLGNGAFELTRGFYRRFGIANATASDKDMNRDA
+ FEQRQIFQRQAAGHGHFKAHIRQAFDRGDIRLAPRHACGLRIAATVINDLPNARFAPL
+ LRLFPGPVACQFDLHVAIELFRHIQRAFRGIDIGAANDCYPVCIGFETHTGEDFTGIG
+ NFSVRQHDFMRIERFQVANGTYTFANAQNSAHFDNIHLFGNQAGGFIGAIHGLVIQRD
+ LQHR"
+ gene complement(3149652..3150290)
+ /gene="ulaD"
+ /locus_tag="SARI_03248"
+ CDS complement(3149652..3150290)
+ /gene="ulaD"
+ /locus_tag="SARI_03248"
+ /inference="protein motif:HMMPfam:IPR001754"
+ /inference="protein motif:superfamily:IPR011060"
+ /inference="similar to AA sequence:REFSEQ:NP_463247.1"
+ /note="catalyzes the formation of L-xylulose-5-phosphate
+ from 3-keto-L-gulonate-6-phosphate in anaerobic
+ L-ascorbate utilization"
+ /codon_start=1
+ /transl_table=11
+ /product="3-keto-L-gulonate-6-phosphate decarboxylase"
+ /protein_id="YP_001572226.1"
+ /db_xref="GI:161505114"
+ /db_xref="InterPro:IPR001754"
+ /db_xref="InterPro:IPR011060"
+ /translation="MLQVALDNQTMDSAYETTRLIAEEVDIIEVGTILCVGEGVRAVR
+ DLKALYPHKIVLADAKIADAGKILSRMCFEANADWVTVICCADINTAKGALDVAKEFN
+ GDVQIELTGYWTWEQAQQWREAGIGQVVYHRSRDAQAAGVAWGEADITAIKRLSDMGF
+ KVTVTGGLALEDLPLFKGIPIHVFIAGRSIRDAESPVEAARQFKRSIAQLWG"
+ misc_feature complement(3149682..3150290)
+ /gene="ulaD"
+ /locus_tag="SARI_03248"
+ /note="3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC)
+ and D-arabino-3-hexulose-6-phosphate synthase (HPS). KGPDC
+ catalyzes the formation of L-xylulose 5-phosphate and
+ carbon dioxide from 3-keto-L-gulonate 6-phosphate as part
+ of the anaerobic pathway for...; Region: KGPDC_HPS;
+ cd04726"
+ /db_xref="CDD:240077"
+ misc_feature complement(order(3149727..3149732,3149790..3149792,
+ 3149796..3149798,3149895..3149897,3150111..3150113,
+ 3150117..3150119,3150204..3150206,3150270..3150272,
+ 3150276..3150278))
+ /gene="ulaD"
+ /locus_tag="SARI_03248"
+ /note="active site"
+ /db_xref="CDD:240077"
+ misc_feature complement(order(3149883..3149891,3149895..3149897,
+ 3149940..3149942,3149958..3149960,3150021..3150023,
+ 3150036..3150038,3150078..3150080,3150096..3150104,
+ 3150171..3150176,3150183..3150185,3150264..3150266))
+ /gene="ulaD"
+ /locus_tag="SARI_03248"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:240077"
+ misc_feature complement(order(3150117..3150119,3150204..3150206))
+ /gene="ulaD"
+ /locus_tag="SARI_03248"
+ /note="magnesium binding site [ion binding]; other site"
+ /db_xref="CDD:240077"
+ gene complement(3150315..3150782)
+ /locus_tag="SARI_03249"
+ CDS complement(3150315..3150782)
+ /locus_tag="SARI_03249"
+ /inference="protein motif:BlastProDom:IPR002178"
+ /inference="protein motif:Gene3D:IPR002178"
+ /inference="protein motif:HMMPfam:IPR002178"
+ /inference="protein motif:ScanRegExp:IPR002178"
+ /inference="protein motif:ScanRegExp:IPR008162"
+ /inference="similar to AA sequence:INSD:AAL23205.1"
+ /note="involved in the phosphorylation and transport of
+ sugars across the cell membrane; protein IIA transfers a
+ phosphoryl group to IIB which then transfers the
+ phosphoryl group to the sugar; IIC forms the translocation
+ channel for the sugar uptake"
+ /codon_start=1
+ /transl_table=11
+ /product="PTS system L-ascorbate-specific transporter
+ subunit IIA"
+ /protein_id="YP_001572227.1"
+ /db_xref="GI:161505115"
+ /db_xref="InterPro:IPR002178"
+ /db_xref="InterPro:IPR008162"
+ /translation="MKLRDSLAQNHSIRLQAEADTWQEAVKIGVDLLVAADVVEPRYY
+ QAILDGVEQFGPYFVIAPGLAMPHGRPEEGVKKTGFALVTLKKPLAFNHEDNDPVDIL
+ ITMAAVDANTHQEVGIMQIVNLFDDEANFDRLRACRTEQDVLDLIDNATAATV"
+ misc_feature complement(3150342..3150755)
+ /locus_tag="SARI_03249"
+ /note="PTS_IIA, PTS system, fructose/mannitol specific IIA
+ subunit. The bacterial phosphoenolpyruvate: sugar
+ phosphotransferase system (PTS) is a multi-protein system
+ involved in the regulation of a variety of metabolic and
+ transcriptional processes. This...; Region: PTS_IIA_fru;
+ cd00211"
+ /db_xref="CDD:238129"
+ misc_feature complement(order(3150579..3150581,3150630..3150632))
+ /locus_tag="SARI_03249"
+ /note="active site"
+ /db_xref="CDD:238129"
+ misc_feature complement(3150579..3150581)
+ /locus_tag="SARI_03249"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238129"
+ gene complement(3150792..3151100)
+ /locus_tag="SARI_03250"
+ CDS complement(3150792..3151100)
+ /locus_tag="SARI_03250"
+ /inference="protein motif:HMMPfam:IPR003501"
+ /inference="similar to AA sequence:INSD:EAY48165.1"
+ /note="involved in the phosphorylation and transport of
+ sugars across the cell membrane; protein IIA transfers a
+ phosphoryl group to IIB which then transfers the
+ phosphoryl group to the sugar; IIC forms the translocation
+ channel for the sugar uptake"
+ /codon_start=1
+ /transl_table=11
+ /product="PTS system L-ascorbate-specific transporter
+ subunit IIB"
+ /protein_id="YP_001572228.1"
+ /db_xref="GI:161505116"
+ /db_xref="InterPro:IPR003501"
+ /translation="MTVRILAVCGNGQGSSMIMKMKVDQFLTQSNIDHTVNSCAVGEY
+ KSELNGADIIIASTHIAGEISVTGNKYVVGVRNMLSPADFGPKLLEVIRAHFPQDVKK
+ "
+ misc_feature complement(3150825..3151091)
+ /locus_tag="SARI_03250"
+ /note="PTS_IIB_ascorbate: subunit IIB of enzyme II (EII)
+ of the L-ascorbate-specific
+ phosphoenolpyruvate:carbohydrate phosphotransferase system
+ (PTS). In this system, EII is an L-ascorbate-specific
+ permease with two cytoplasmic subunits (IIA and IIB) and
+ a...; Region: PTS_IIB_ascorbate; cd05563"
+ /db_xref="CDD:99905"
+ misc_feature complement(order(3151053..3151058,3151065..3151070,
+ 3151074..3151076))
+ /locus_tag="SARI_03250"
+ /note="active site"
+ /db_xref="CDD:99905"
+ misc_feature complement(order(3151053..3151061,3151065..3151076))
+ /locus_tag="SARI_03250"
+ /note="P-loop; other site"
+ /db_xref="CDD:99905"
+ misc_feature complement(3151074..3151076)
+ /locus_tag="SARI_03250"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:99905"
+ gene complement(3151113..3152513)
+ /gene="ulaA"
+ /locus_tag="SARI_03251"
+ CDS complement(3151113..3152513)
+ /gene="ulaA"
+ /locus_tag="SARI_03251"
+ /inference="protein motif:HMMPfam:IPR007333"
+ /inference="similar to AA sequence:REFSEQ:NP_463244.2"
+ /note="membrane component; functions with enzymes IIB
+ (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for
+ anaerobic utilization and uptake of L-ascorbate; sgaTBA
+ are regulated by yifQ as well as Crp and Fnr"
+ /codon_start=1
+ /transl_table=11
+ /product="PTS system ascorbate-specific transporter
+ subunit IIC"
+ /protein_id="YP_001572229.1"
+ /db_xref="GI:161505117"
+ /db_xref="InterPro:IPR007333"
+ /translation="MEILYNIFTVFFNQVMTNAPLLLGIVTCLGYILLRKSVSVVIKG
+ TIKTIIGFMLLQAGSGILTSTFKPVVEKMSEVYGINGAISDTYASMMATIERMGDAYS
+ WVGYAVLLALALNICYVLLRRITGIRTIMLTGHIMFQQAGLIAVSFYIFGYSMWTTII
+ CTAILVSLYWGITSNMMYKPTQEVTDGCGFSIGHQQQFASWIAYKVAPYLGKKEESVE
+ DLKLPGWLNIFHDNIVSTAIVMTIFFGAILLSFGIDTVQAMAGKTHWTIYILQTGFSF
+ AVAIFIITQGVRMFVAELSEAFNGISQRLIPGAVLAIDCAAIYSFAPNAVVWGFMWGT
+ IGQLIAVGILVGCGSSILIIPGFIPMFFSNATIGVFANHFGGWRAALKICLVMGMIEI
+ FGCVWAVKLTGMSAWMGMADWSILAPPMMQGFFSLGIVFIAVIIVIALVYMIFAGRAL
+ RAEEDAEKQLAEVSAQ"
+ misc_feature complement(<3151116..3152513)
+ /gene="ulaA"
+ /locus_tag="SARI_03251"
+ /note="PTS system ascorbate-specific transporter subunits
+ IICB; Provisional; Region: PRK09548"
+ /db_xref="CDD:236559"
+ misc_feature complement(3151119..3152513)
+ /gene="ulaA"
+ /locus_tag="SARI_03251"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: SgaT; COG3037"
+ /db_xref="CDD:225579"
+ gene 3152861..3153940
+ /locus_tag="SARI_03252"
+ CDS 3152861..3153940
+ /locus_tag="SARI_03252"
+ /inference="similar to AA sequence:REFSEQ:YP_219243.1"
+ /note="'KEGG: spi:MGAS10750_Spy0162 6.0e-118
+ metal-dependent hydrolase;
+ COG: COG2220 Predicted Zn-dependent hydrolases of the
+ beta-lactamase fold;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative L-ascorbate 6-phosphate lactonase"
+ /protein_id="YP_001572230.1"
+ /db_xref="GI:161505118"
+ /translation="MKVNAMSKVQSITRESWILSTFPEWGSWLNEEIEQEQVAPGTFA
+ MWWLGCTGIWLKSEGGTNVCVDFWCGTGKQSHGNPLMKTGHQMQRMAGVKKLQPNLRT
+ TPFVLDPFAIRQVDAILATHDHNDHIDVNVAAAVMQNCADDVPFIGPQTCVDLWVGWG
+ VPKERCIVIKPGDVVKVKDIEIHALDAFDRTALITLPADQKAAGVLPDGMDVRAVNYL
+ FKTPGGSLYHSGDSHYSNYYAKHGNEHQIDVALGSYGENPRGITDKMTSADILRMAES
+ LNTKVVIPFHHDIWSNFQADPQEIRVLWEMKKDRLKYGFKPFIWQVGGKFTWPLDKDN
+ FEYHYPRGFDDCFTIEPDLPFKSFL"
+ misc_feature 3152876..3153937
+ /locus_tag="SARI_03252"
+ /note="putative L-ascorbate 6-phosphate lactonase;
+ Provisional; Region: PRK11709"
+ /db_xref="CDD:236958"
+ misc_feature 3152978..3153847
+ /locus_tag="SARI_03252"
+ /note="Predicted Zn-dependent hydrolases of the
+ beta-lactamase fold [General function prediction only];
+ Region: COG2220"
+ /db_xref="CDD:225130"
+ gene 3154046..3154801
+ /locus_tag="SARI_03253"
+ CDS 3154046..3154801
+ /locus_tag="SARI_03253"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR001034"
+ /inference="protein motif:HMMSmart:IPR001034"
+ /inference="protein motif:ScanRegExp:IPR001034"
+ /inference="similar to AA sequence:INSD:AAO71879.1"
+ /note="negative regulator of ulaG and ulaABCDEF"
+ /codon_start=1
+ /transl_table=11
+ /product="transcriptional repressor UlaR"
+ /protein_id="YP_001572231.1"
+ /db_xref="GI:161505119"
+ /db_xref="InterPro:IPR001034"
+ /db_xref="InterPro:IPR011991"
+ /translation="MTEAQRHQILLDMLAQLGFVTVENVIERLGISPATARRDINKLD
+ ESGKLKKVRNGAEAITQQRPRWTPMNLHQAQNHDEKVRIAKAASQLVNPGESVVINCG
+ STAFLLGREMCGKPVQIITNYLPLANYLIDQEHESVIIMGGQYNKSQSITLSPQGSEN
+ SLYAGHWMFTSGKGLTADGLYKTDMLTAMAEQKMLSVVGKLVALVDSSKIGERAGMLF
+ SRADQIDMLITGKNANPEVLQQLEAQGVSILRV"
+ misc_feature 3154046..3154798
+ /locus_tag="SARI_03253"
+ /note="transcriptional repressor UlaR; Provisional;
+ Region: PRK13509"
+ /db_xref="CDD:184100"
+ misc_feature 3154061..3154231
+ /locus_tag="SARI_03253"
+ /note="DeoR-like helix-turn-helix domain; Region:
+ HTH_DeoR; pfam08220"
+ /db_xref="CDD:116806"
+ misc_feature 3154265..3154741
+ /locus_tag="SARI_03253"
+ /note="DeoR C terminal sensor domain; Region: DeoRC;
+ pfam00455"
+ /db_xref="CDD:201239"
+ gene complement(3154798..3155547)
+ /locus_tag="SARI_03254"
+ CDS complement(3154798..3155547)
+ /locus_tag="SARI_03254"
+ /inference="protein motif:HMMPfam:IPR003140"
+ /inference="similar to AA sequence:INSD:CAD06857.1"
+ /note="YjfP; esterase activity towards palmitoyl-CoA and
+ pNP-butyrate in vitro; unknown function and substrate in
+ vivo"
+ /codon_start=1
+ /transl_table=11
+ /product="esterase"
+ /protein_id="YP_001572232.1"
+ /db_xref="GI:161505120"
+ /db_xref="InterPro:IPR003140"
+ /translation="MIAIETRQLAGRAVLHAFPEGNRDAPLPCVVFYHGFTSSSLVYS
+ YFAVALAQAGFRVIMPDAPEHGARFGGDSQGRIHRFWQILQQNMQEFATLRAAIQAEN
+ WLPDDRLAVGGASMGGMTALGIMTRHREVKCGASLMGSGYFTELARTLFPPLSPQNPA
+ QQAEFDNIIAPLREWEVTHQLERLADRPLLLWHGQEDDVVPAIETFRLQQALAGAKLD
+ KHVTCLWAAGVRHRITPEALSATVTFFRQHL"
+ misc_feature complement(3154801..3155547)
+ /locus_tag="SARI_03254"
+ /note="esterase; Provisional; Region: PRK10566"
+ /db_xref="CDD:182555"
+ misc_feature complement(<3155350..>3155463)
+ /locus_tag="SARI_03254"
+ /note="Putative lysophospholipase; Region: Hydrolase_4;
+ pfam12146"
+ /db_xref="CDD:221442"
+ misc_feature complement(<3154912..3155400)
+ /locus_tag="SARI_03254"
+ /note="Prolyl oligopeptidase family; Region: Peptidase_S9;
+ pfam00326"
+ /db_xref="CDD:215859"
+ gene 3155731..3156060
+ /locus_tag="SARI_03255"
+ CDS 3155731..3156060
+ /locus_tag="SARI_03255"
+ /inference="protein motif:HMMPfam:IPR010854"
+ /inference="similar to AA sequence:INSD:AAL23199.1"
+ /note="'in Escherichia coli, mutation of this gene affects
+ biofilm maturation, stress response, and motility'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative biofilm stress and motility protein A"
+ /protein_id="YP_001572233.1"
+ /db_xref="GI:161505121"
+ /db_xref="InterPro:IPR010854"
+ /translation="MIIRKRDRVMRRFASLIAALLLSACSVLQGTPQPAPPVADHPQE
+ IRRDQTQGLQRMGTVSALVRGSPDDAIDEIRAKAVAAKADYYVILMVDETVVTGQWYS
+ QAILYRQ"
+ misc_feature 3155746..3156057
+ /locus_tag="SARI_03255"
+ /note="putative biofilm stress and motility protein A;
+ Provisional; Region: PRK14864"
+ /db_xref="CDD:184866"
+ gene 3156146..3156466
+ /locus_tag="SARI_03256"
+ CDS 3156146..3156466
+ /locus_tag="SARI_03256"
+ /inference="protein motif:HMMPfam:IPR010854"
+ /inference="similar to AA sequence:INSD:AAV79932.1"
+ /note="'COG: NOG11343 non supervised orthologous group;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572234.1"
+ /db_xref="GI:161505122"
+ /db_xref="InterPro:IPR010854"
+ /translation="MERPVNCGICNKELTMKQELALSLLLLSAGLVSTTAQSAEFASA
+ DCVTGLNEIGLISVSNVAGNPQDVERIIALKADEQGASWYRIIQMYEEQQSDNWRVQA
+ ILYA"
+ misc_feature 3156293..3156460
+ /locus_tag="SARI_03256"
+ /note="Protein of unknown function (DUF1471); Region:
+ DUF1471; pfam07338"
+ /db_xref="CDD:219380"
+ gene complement(3156554..3158176)
+ /locus_tag="SARI_03257"
+ CDS complement(3156554..3158176)
+ /locus_tag="SARI_03257"
+ /inference="protein motif:Gene3D:IPR006091"
+ /inference="protein motif:Gene3D:IPR013764"
+ /inference="protein motif:HMMPfam:IPR006090"
+ /inference="protein motif:HMMPfam:IPR006091"
+ /inference="protein motif:HMMPfam:IPR006092"
+ /inference="protein motif:ScanRegExp:IPR006089"
+ /inference="protein motif:superfamily:IPR009075"
+ /inference="protein motif:superfamily:IPR009100"
+ /inference="similar to AA sequence:REFSEQ:YP_219238.1"
+ /note="catalyzes the formation of 3-methylcrotonyl-CoA
+ from isovaleryl-CoA"
+ /codon_start=1
+ /transl_table=11
+ /product="isovaleryl CoA dehydrogenase"
+ /protein_id="YP_001572235.1"
+ /db_xref="GI:161505123"
+ /db_xref="InterPro:IPR006089"
+ /db_xref="InterPro:IPR006090"
+ /db_xref="InterPro:IPR006091"
+ /db_xref="InterPro:IPR006092"
+ /db_xref="InterPro:IPR009075"
+ /db_xref="InterPro:IPR009100"
+ /db_xref="InterPro:IPR013764"
+ /translation="MPWQTHTVFNQPTPLNNSNLFLSDGALCEAVSREGAGWDSDLLA
+ SIGQQLGTAESLELGRLANAYPPELQRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHN
+ LSWAEDARAGSFVARAARFVLHAQVEAGALCPVTMTFAATPLLLRMLPATFHDWLAPL
+ RSDRYDSHLLPGGQKRGLLIGMGMTEKQGGSDVLSNTTRADRLADGSYRLVGHKWFFS
+ VPQSDAHLVLAQAKGGVSCFFVPRFLPDGQRNAVRLERLKDKLGNRSNASAEVEFQDA
+ VGWLLGEEGEGIRHILKMGGMTRFDCALGSHGLMRRAFSVAIYHAHQRQAFGKPLIDQ
+ PLMRQTLSRMALCLEGQTALLFRLARAWEQRSEAKEALWARLLTPAAKFAICKQGIPF
+ VAEAMEVLGGMGYCEESELPRLYREMPVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLG
+ EVFAEVKGQDRHYDRAVRQLQQRLRKPDEVMGREITQQLFLLGCGAEMLRHASPPLAQ
+ AWCQMMLDTRGEMPLSAQVQNDLLLRATGGLR"
+ misc_feature complement(3156563..3158176)
+ /locus_tag="SARI_03257"
+ /note="isovaleryl CoA dehydrogenase; Provisional; Region:
+ PRK11561"
+ /db_xref="CDD:183199"
+ misc_feature complement(3156854..3158116)
+ /locus_tag="SARI_03257"
+ /note="Proteins involved in DNA damage response, similar
+ to the AidB gene product; Region: AidB; cd01154"
+ /db_xref="CDD:173843"
+ misc_feature complement(order(3156890..3156892,3156896..3156898,
+ 3156917..3156919,3157523..3157525,3157529..3157531,
+ 3157604..3157609,3157622..3157627,3157631..3157633))
+ /locus_tag="SARI_03257"
+ /note="FAD binding site [chemical binding]; other site"
+ /db_xref="CDD:173843"
+ misc_feature complement(order(3156866..3156868,3156899..3156904,
+ 3157604..3157606))
+ /locus_tag="SARI_03257"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:173843"
+ misc_feature complement(3156899..3156904)
+ /locus_tag="SARI_03257"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:173843"
+ gene complement(3158261..3158425)
+ /locus_tag="SARI_03258"
+ CDS complement(3158261..3158425)
+ /locus_tag="SARI_03258"
+ /inference="protein motif:HMMPfam:IPR005494"
+ /inference="similar to AA sequence:INSD:CAD06853.1"
+ /note="'KEGG: pen:PSEEN1824 2.9e-17 glutaTHIonylspermidine
+ synthase;
+ COG: COG0754 GlutaTHIonylspermidine synthase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572236.1"
+ /db_xref="GI:161505124"
+ /db_xref="InterPro:IPR005494"
+ /translation="MIYQAFQPLPRFGDSYTLIGSWIIDDEASGMGIREDNTLITKDT
+ SRFVPHYIAG"
+ misc_feature complement(3158264..>3158425)
+ /locus_tag="SARI_03258"
+ /note="Glutathionylspermidine synthase preATP-grasp;
+ Region: GSP_synth; cl00503"
+ /db_xref="CDD:241907"
+ gene complement(3158422..3158727)
+ /locus_tag="SARI_03259"
+ CDS complement(3158422..3158727)
+ /locus_tag="SARI_03259"
+ /inference="protein motif:HMMPfam:IPR007140"
+ /inference="similar to AA sequence:INSD:CAD06851.1"
+ /note="'COG: COG3766 Predicted membrane protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572237.1"
+ /db_xref="GI:161505125"
+ /db_xref="InterPro:IPR007140"
+ /translation="MIYVNVKPALKLFIGAAMIIIFLFIYSKITPYNEWQLIKNNNTA
+ ASLAFSGTLLGYVFPLSSAAINSVSIPDYFAWGGIALVIQLLIYGCVRLYIPTLTSR"
+ misc_feature complement(3158539..3158691)
+ /locus_tag="SARI_03259"
+ /note="Domain of Unknown Function (DUF350); Region:
+ DUF350; pfam03994"
+ /db_xref="CDD:202847"
+ gene complement(3158630..3158899)
+ /locus_tag="SARI_03260"
+ CDS complement(3158630..3158899)
+ /locus_tag="SARI_03260"
+ /inference="protein motif:HMMPfam:IPR007157"
+ /inference="similar to AA sequence:INSD:AAL23191.1"
+ /note="'COG: COG1842 Phage shock protein A (IM30),
+ suppresses sigma54-dependent transcription;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572238.1"
+ /db_xref="GI:161505126"
+ /db_xref="InterPro:IPR007157"
+ /translation="MFTLGKSFVAQAEEAIDEAQGVRMLEQHIRDAKAELDKAGKSRV
+ DLLARVKLSHDKLNDLRERKASLETFYWRGNDYYIPFYLLKDNAV"
+ misc_feature complement(<3158696..3158899)
+ /locus_tag="SARI_03260"
+ /note="Phage shock protein A (IM30), suppresses
+ sigma54-dependent transcription [Transcription / Signal
+ transduction mechanisms]; Region: PspA; COG1842"
+ /db_xref="CDD:224755"
+ gene complement(3158932..3159123)
+ /locus_tag="SARI_03261"
+ CDS complement(3158932..3159123)
+ /locus_tag="SARI_03261"
+ /inference="similar to AA sequence:INSD:CAD06847.1"
+ /note="'COG: COG3789 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572239.1"
+ /db_xref="GI:161505127"
+ /translation="MLRDQKVLPLSSVGITWVKQEGYYVAFGALSLNSSLDDVTLEIT
+ TLVENALDVAEITQDYSQE"
+ misc_feature complement(3158935..>3159123)
+ /locus_tag="SARI_03261"
+ /note="Uncharacterized protein conserved in bacteria
+ (DUF2170); Region: DUF2170; cl01551"
+ /db_xref="CDD:242576"
+ gene complement(3159460..3160191)
+ /locus_tag="SARI_03262"
+ CDS complement(3159460..3160191)
+ /locus_tag="SARI_03262"
+ /inference="protein motif:BlastProDom:IPR001537"
+ /inference="protein motif:HMMPfam:IPR001537"
+ /inference="protein motif:HMMPfam:IPR013123"
+ /inference="protein motif:HMMTigr:IPR004441"
+ /inference="similar to AA sequence:REFSEQ:NP_463230.1"
+ /note="Specifically methylates the ribose of guanosine
+ 2251 in 23S rRNA"
+ /codon_start=1
+ /transl_table=11
+ /product="23S rRNA (guanosine-2'-O-)-methyltransferase"
+ /protein_id="YP_001572240.1"
+ /db_xref="GI:161505128"
+ /db_xref="InterPro:IPR001537"
+ /db_xref="InterPro:IPR004441"
+ /db_xref="InterPro:IPR013123"
+ /translation="MSEMIYGIHAVQALLERAPERFQDVFILKGREDKRLLPLIHALE
+ AQGVVIQLANRQFLDEKSEGAVHQGIIARVKPGRQYQENDLPDLIALHERPFLLILDG
+ VTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLART
+ MRMLQEENIWIVGTAGEADHTLYQSKMPGRMALVMGAEGEGMRRLTREHCDELISIPM
+ AGSVSSLNVSVATGICLFEAVRQRI"
+ misc_feature complement(3159466..3160191)
+ /locus_tag="SARI_03262"
+ /note="23S rRNA (guanosine-2'-O-)-methyltransferase;
+ Provisional; Region: PRK11181"
+ /db_xref="CDD:183021"
+ misc_feature complement(3159964..3160179)
+ /locus_tag="SARI_03262"
+ /note="RNA 2'-O ribose methyltransferase substrate
+ binding; Region: SpoU_sub_bind; smart00967"
+ /db_xref="CDD:214943"
+ misc_feature complement(3159484..3159909)
+ /locus_tag="SARI_03262"
+ /note="SpoU rRNA Methylase family; Region: SpoU_methylase;
+ pfam00588"
+ /db_xref="CDD:216010"
+ gene complement(3160255..3162699)
+ /locus_tag="SARI_03263"
+ CDS complement(3160255..3162699)
+ /locus_tag="SARI_03263"
+ /inference="protein motif:Gene3D:IPR012340"
+ /inference="protein motif:HMMPfam:IPR001900"
+ /inference="protein motif:HMMPfam:IPR003029"
+ /inference="protein motif:HMMPfam:IPR013223"
+ /inference="protein motif:HMMPfam:IPR013668"
+ /inference="protein motif:HMMSmart:IPR003029"
+ /inference="protein motif:HMMSmart:IPR011129"
+ /inference="protein motif:HMMTigr:IPR004476"
+ /inference="protein motif:HMMTigr:IPR011805"
+ /inference="protein motif:ScanRegExp:IPR001900"
+ /inference="protein motif:superfamily:IPR008994"
+ /note="'3'-5'exoribonuclease that acts nonspecifically on
+ poly(A), poly(U) and ribosomal RNAs'"
+ /codon_start=1
+ /transl_table=11
+ /product="exoribonuclease R"
+ /protein_id="YP_001572241.1"
+ /db_xref="GI:161505129"
+ /db_xref="InterPro:IPR001900"
+ /db_xref="InterPro:IPR003029"
+ /db_xref="InterPro:IPR004476"
+ /db_xref="InterPro:IPR008994"
+ /db_xref="InterPro:IPR011129"
+ /db_xref="InterPro:IPR011805"
+ /db_xref="InterPro:IPR012340"
+ /db_xref="InterPro:IPR013223"
+ /db_xref="InterPro:IPR013668"
+ /translation="MSQDPFQEREAEKYANPIPSREFILEHLTKREKPASREELAIEL
+ NIEGEEQLEALRRRLRAMERDGQLVFTRRQCYALPERLDLVKGTVIGHRDGYGFLRVE
+ GRKDDLYLSSEQMKTCIHGDQVLAQPLGADRKGRREARIVRVLVPKTSQIVGRYFTDA
+ GVGFVVPDDSRLSFDILIPPEDVMGARMGFVVVVELTQRPTRRTKAVGKIVEVLGDNM
+ GTGMAVDMALRTHEIPYIWPQAVEQQVAGLKEEVPEEAKAGRVDLRDLPLVTIDGEDA
+ RDFDDAVYCEKKRGGGWRLWVAIADVSYYVRPPTPLDREARNRGTSVYFPSQVVPMLP
+ EVLSNGLCSLNPQVDRLCMVCEMTISAKGRLTGYKFYEAVMSSHARLTYTKVWHMLQG
+ DQELREQYAPLVKHIEELHNLYNVLDKAREERGGISFESEEAKFIFNAERRIERIEQT
+ QRNDAHKLIEECMIMANISAARFVEKAKEPALFRIHDKPTTEAITSFRSVLAELGLEL
+ PGGNKPEPRDYAELLESIADRPDAEMLQTMLLRSMKQAIYDPENRGHFGLALQSYAHF
+ TSPIRRYPDLSLHRAIKYLLAKEQGNKGNTTETGGYHYSMEEMLQLGQHCSMAERRAD
+ EATRDVSDWLKCDFMLDQVGNVFKGVIASVTGFGFFVRLDELFIDGLVHVSSLDNDYY
+ RFDQVGQRLIGESGGQTYRLGDRVEVRVEAVNMDERKIDFSLISSERAPRNVGKTARE
+ KAKKGESKNAGKRRQVGKKVNFEPDSAFRGEKKGKAKPKAEKKGDKKAKKPSAKTLKI
+ AAATKAKRAAKKKSAE"
+ misc_feature complement(3160390..3162699)
+ /locus_tag="SARI_03263"
+ /note="exoribonuclease R; Provisional; Region: PRK11642"
+ /db_xref="CDD:236944"
+ misc_feature complement(3162268..3162441)
+ /locus_tag="SARI_03263"
+ /note="Ribonuclease B OB domain; Region: OB_RNB;
+ pfam08206"
+ /db_xref="CDD:203875"
+ misc_feature complement(3162061..3162228)
+ /locus_tag="SARI_03263"
+ /note="S1_like: Ribosomal protein S1-like RNA-binding
+ domain. Found in a wide variety of RNA-associated
+ proteins. Originally identified in S1 ribosomal protein.
+ This superfamily also contains the Cold Shock Domain
+ (CSD), which is a homolog of the S1 domain; Region:
+ S1_like; cl09927"
+ /db_xref="CDD:245202"
+ misc_feature complement(3160942..3161922)
+ /locus_tag="SARI_03263"
+ /note="RNB domain; Region: RNB; pfam00773"
+ /db_xref="CDD:216112"
+ misc_feature complement(3160525..3160773)
+ /locus_tag="SARI_03263"
+ /note="S1_RNase_R: RNase R C-terminal S1 domain. RNase R
+ is a processive 3' to 5' exoribonuclease, which
+ is a homolog of RNase II. RNase R degrades RNA with
+ secondary structure having a 3' overhang of at least
+ 7 nucleotides. RNase R and PNPase...; Region: S1_RNase_R;
+ cd04471"
+ /db_xref="CDD:239917"
+ misc_feature complement(order(3160681..3160683,3160687..3160689,
+ 3160720..3160722,3160744..3160746))
+ /locus_tag="SARI_03263"
+ /note="RNA binding site [nucleotide binding]; other site"
+ /db_xref="CDD:239917"
+ gene complement(3162737..3163114)
+ /locus_tag="SARI_03264"
+ CDS complement(3162737..3163114)
+ /locus_tag="SARI_03264"
+ /inference="protein motif:BlastProDom:IPR000944"
+ /inference="protein motif:HMMPfam:IPR000944"
+ /inference="protein motif:HMMTigr:IPR000944"
+ /inference="similar to AA sequence:INSD:AAL23187.1"
+ /note="negatively regulates the transcription of genes
+ upregulated by nitrosative stress"
+ /codon_start=1
+ /transl_table=11
+ /product="transcriptional repressor NsrR"
+ /protein_id="YP_001572242.1"
+ /db_xref="GI:161505130"
+ /db_xref="InterPro:IPR000944"
+ /translation="MASLPEGRMTSISEVTEVYGVSRNHMVKIINQLSRAGFVTAVRG
+ KNGGIRLGKPANTICIGDVVRELEPLSLVNCSSEFCHITPACRLKQALSKAVRSFLKE
+ LDNYTLADLVEENQPLYKLLLVE"
+ misc_feature complement(3162740..3163114)
+ /locus_tag="SARI_03264"
+ /note="Predicted transcriptional regulator
+ [Transcription]; Region: COG1959"
+ /db_xref="CDD:224870"
+ misc_feature complement(3162740..3163114)
+ /locus_tag="SARI_03264"
+ /note="transcriptional repressor NsrR; Provisional;
+ Region: PRK11014"
+ /db_xref="CDD:236820"
+ gene complement(3163382..3164680)
+ /locus_tag="SARI_03265"
+ CDS complement(3163382..3164680)
+ /locus_tag="SARI_03265"
+ /inference="protein motif:BlastProDom:IPR001114"
+ /inference="protein motif:HMMPanther:IPR001114"
+ /inference="protein motif:HMMPfam:IPR001114"
+ /inference="protein motif:HMMSmart:IPR001114"
+ /inference="protein motif:HMMTigr:IPR001114"
+ /inference="protein motif:ScanRegExp:IPR001114"
+ /inference="similar to AA sequence:REFSEQ:YP_153232.1"
+ /note="'catalyzes the formation of
+ N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine
+ monophosphate and GTP in AMP biosynthesis'"
+ /codon_start=1
+ /transl_table=11
+ /product="adenylosuccinate synthetase"
+ /protein_id="YP_001572243.1"
+ /db_xref="GI:161505131"
+ /db_xref="InterPro:IPR001114"
+ /translation="MGNNVVVLGTQWGDEGKGKIVDLLTERAKYVVRYQGGHNAGHTL
+ VINGEKTVLHLIPSGILRENVISIIGNGVVLSPSALMKEMQELEDRGIPVRERLLLSE
+ ACPLILDYHVALDNAREKARGAKAIGTTGRGIGPAYEDKVARRGLRVGDLFDKATFAE
+ KLKEVMEYHNFQLVNFYKVDAVDYQKVLDDVMAIADILTGMVVDVSDLLDQARKRGDF
+ VMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDYVLGIIKAYSTRVGA
+ GPFPTELFDETGEFLCKQGNEYGATTGRRRRTGWLDSVAIRRAVQINSLSGFCLTKLD
+ VLDGLKEVKICVAYRMPDGREVTTTPLAADDWQGIEPIYETMPGWSESTFGVKDRSGL
+ PAAALNYIKRIEELTGVPIDIISTGPDRTETMILRDPFDA"
+ misc_feature complement(3163406..3164671)
+ /locus_tag="SARI_03265"
+ /note="Adenylosuccinate synthetase; Region:
+ Adenylsucc_synt; smart00788"
+ /db_xref="CDD:197875"
+ misc_feature complement(3163427..3164671)
+ /locus_tag="SARI_03265"
+ /note="Adenylosuccinate synthetase (AdSS) catalyzes the
+ first step in the de novo biosynthesis of AMP. IMP and
+ L-aspartate are conjugated in a two-step reaction
+ accompanied by the hydrolysis of GTP to GDP in the
+ presence of Mg2+. In the first step, the...; Region: AdSS;
+ cd03108"
+ /db_xref="CDD:239382"
+ misc_feature complement(order(3163427..3163432,3163679..3163681,
+ 3163685..3163687,3164546..3164548,3164552..3164560,
+ 3164627..3164635,3164639..3164641))
+ /locus_tag="SARI_03265"
+ /note="GDP-binding site [chemical binding]; other site"
+ /db_xref="CDD:239382"
+ misc_feature complement(order(3164555..3164557,3164624..3164626,
+ 3164633..3164635))
+ /locus_tag="SARI_03265"
+ /note="ACT binding site; other site"
+ /db_xref="CDD:239382"
+ misc_feature complement(order(3163961..3163963,3164006..3164008,
+ 3164291..3164293,3164300..3164302,3164564..3164566))
+ /locus_tag="SARI_03265"
+ /note="IMP binding site; other site"
+ /db_xref="CDD:239382"
+ gene complement(3164783..3164980)
+ /locus_tag="SARI_03266"
+ CDS complement(3164783..3164980)
+ /locus_tag="SARI_03266"
+ /inference="similar to AA sequence:INSD:AAL23185.1"
+ /note="'COG: COG3242 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572244.1"
+ /db_xref="GI:161505132"
+ /translation="MNSTIWLALALVLVLEGLGPMLYPGAWKKMVSALAQLPENILRR
+ FGGGLVVAGVVVYYMLRKTIG"
+ misc_feature complement(3164795..3164980)
+ /locus_tag="SARI_03266"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG3242"
+ /db_xref="CDD:225782"
+ gene complement(3165059..3166063)
+ /locus_tag="SARI_03267"
+ CDS complement(3165059..3166063)
+ /locus_tag="SARI_03267"
+ /inference="protein motif:HMMPfam:IPR001107"
+ /inference="protein motif:HMMSmart:IPR001107"
+ /inference="protein motif:HMMTigr:IPR010200"
+ /inference="protein motif:superfamily:IPR001544"
+ /inference="similar to AA sequence:INSD:CAD06841.1"
+ /note="with HflK inhibits proteolysis of lambda cII
+ protein by FtsH"
+ /codon_start=1
+ /transl_table=11
+ /product="FtsH protease regulator HflC"
+ /protein_id="YP_001572245.1"
+ /db_xref="GI:161505133"
+ /db_xref="InterPro:IPR001107"
+ /db_xref="InterPro:IPR001544"
+ /db_xref="InterPro:IPR010200"
+ /translation="MRKSVIAIIIIVLVVLYMSVFVVKEGERGITLRFGKVLRDDENK
+ PLVYAPGLHFKIPFIESVKMLDARIQTMDNQADRFVTKEKKDLIVDSYIKWRISDFSR
+ YYLATGGGDISQAEVLLKRKFSDRLRSEIGRLDVKDIVTDSRGRLTLEVRDALNSGSA
+ GTDDEVATPAADDAIAEAAERVTAETKGKVPVVNPNSMAALGIEVVDVRIKQINLPTE
+ VSEAIYNRMRAEREAVARRHRSQGQEEAEKLRAAADYEVTKTLAEAERQGRIMRGEGD
+ AEAAKLFADAFSQDPDFYAFIRSLRAYEKSFESNQDVMVLSPDSDFFRYMKTPSSTAR
+ "
+ misc_feature complement(3165062..3166063)
+ /locus_tag="SARI_03267"
+ /note="FtsH protease regulator HflC; Provisional; Region:
+ PRK11029"
+ /db_xref="CDD:182913"
+ misc_feature complement(3165143..3165994)
+ /locus_tag="SARI_03267"
+ /note="Band_7_HflC: The band 7 domain of flotillin
+ (reggie) like proteins. This group includes proteins
+ similar to prokaryotic HlfC (High frequency of
+ lysogenization C). Although many members of the band 7
+ family are lipid raft associated, prokaryote plasma...;
+ Region: Band_7_HflC; cd03405"
+ /db_xref="CDD:239499"
+ gene complement(3166066..3167325)
+ /locus_tag="SARI_03268"
+ CDS complement(3166066..3167325)
+ /locus_tag="SARI_03268"
+ /inference="protein motif:FPrintScan:IPR001972"
+ /inference="protein motif:HMMPfam:IPR001107"
+ /inference="protein motif:HMMSmart:IPR001107"
+ /inference="protein motif:HMMTigr:IPR010201"
+ /inference="similar to AA sequence:REFSEQ:NP_463224.1"
+ /note="with HflC inhibits proteolysis of lambda cII
+ protein by FtsH"
+ /codon_start=1
+ /transl_table=11
+ /product="FtsH protease regulator HflK"
+ /protein_id="YP_001572246.1"
+ /db_xref="GI:161505134"
+ /db_xref="InterPro:IPR001107"
+ /db_xref="InterPro:IPR001972"
+ /db_xref="InterPro:IPR010201"
+ /translation="MAWNQPGNNGQDRDPWGSSKPGSNSGGNGNKGGRDQGPPDLDDI
+ FRKLSKKLGGFGGGKGAGSGSGSSSQGPRPQLGGRIVAIAMAAIVIIWAASGFYTIKE
+ AERGVVTRFGKFSHLVEPGLNWKPTFIDNVTPVNVEAVRELAASGVMLTSDENVVRVE
+ MNVQYRVTDPQKYLFSVTSPDDSLRQATDSALRGVIGKYTMDRILTEGRTVIRSDTQR
+ ELEETIKPYNMGITLLDVNFQAARPPEEVKAAFDDAIAARENEQQYIREAEAYTNEVQ
+ PRANGQAQRILEEARAYKTQTILEAQGEVARFAKILPEYKAAPQITRERLYIETMEKV
+ LSHTRKVLVNDKSGNLMVLPLDQMLKGGNTPEAKSDNSASNLLRLPPSTKSNASGASN
+ TSSSNQGDIMDQRRANAQRNDYQRQGE"
+ misc_feature complement(3166069..3167325)
+ /locus_tag="SARI_03268"
+ /note="FtsH protease regulator HflK; Provisional; Region:
+ PRK10930"
+ /db_xref="CDD:236799"
+ misc_feature complement(<3167194..3167325)
+ /locus_tag="SARI_03268"
+ /note="Bacterial membrane protein N terminal; Region:
+ HflK_N; pfam12221"
+ /db_xref="CDD:221467"
+ misc_feature complement(3166321..3167043)
+ /locus_tag="SARI_03268"
+ /note="Band_7_HflK: The band 7 domain of flotillin
+ (reggie) like proteins. This group includes proteins
+ similar to prokaryotic HlfK (High frequency of
+ lysogenization K). Although many members of the band 7
+ family are lipid raft associated, prokaryote plasma...;
+ Region: Band_7_HflK; cd03404"
+ /db_xref="CDD:239498"
+ gene complement(3167543..3168823)
+ /locus_tag="SARI_03269"
+ CDS complement(3167543..3168823)
+ /locus_tag="SARI_03269"
+ /inference="protein motif:HMMPfam:IPR002917"
+ /inference="similar to AA sequence:REFSEQ:YP_153228.1"
+ /note="involved in modulation of proteins HflK and HflC;
+ part of the hflA locus (high frequency of lysogenization)
+ which governs the lysis-lysogeny decision of bacteriophage
+ lambda by controlling stability of the phage cII protein"
+ /codon_start=1
+ /transl_table=11
+ /product="putative GTPase HflX"
+ /protein_id="YP_001572247.1"
+ /db_xref="GI:161505135"
+ /db_xref="InterPro:IPR002917"
+ /translation="MFDRYDAGEQAVLVHIYFSQDKDMEDLLEFESLVSSAGVEAMQV
+ ITGSRKAPHPKYFVGEGKAVEIAEAVKATGAAVVLFDHALSPAQERNLERLCECRVID
+ RTGLILDIFAQRARTHEGKLQVELAQLRHLATRLVRGWTHLERQKGGIGLRGPGETQL
+ ETDRRLLRNRIVQIQSRLEKVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNQIT
+ EARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQ
+ ATLLLHVVDAADVRVQENIEAVNTVLEEIDAHEIPTLMVMNKIDMLDNFEPRIDRDEE
+ NKPIRVWLSAQTGVGIPQLFQALTERLSGEVAQRTLRLPPQEGRLRSRFYQLQAIEKE
+ WMEEDGSVSLQVRMPIVDWRRLCKQEPALIEYVI"
+ misc_feature complement(3167546..3168823)
+ /locus_tag="SARI_03269"
+ /note="GTPase HflX; Provisional; Region: PRK11058"
+ /db_xref="CDD:182934"
+ misc_feature complement(3168488..3168772)
+ /locus_tag="SARI_03269"
+ /note="GTP-binding GTPase N-terminal; Region: GTP-bdg_N;
+ pfam13167"
+ /db_xref="CDD:205348"
+ misc_feature complement(3167741..3168355)
+ /locus_tag="SARI_03269"
+ /note="HflX GTPase family; Region: HflX; cd01878"
+ /db_xref="CDD:206666"
+ misc_feature complement(3168191..3168214)
+ /locus_tag="SARI_03269"
+ /note="G1 box; other site"
+ /db_xref="CDD:206666"
+ misc_feature complement(order(3167789..3167797,3167864..3167866,
+ 3167870..3167875,3168188..3168199,3168203..3168205))
+ /locus_tag="SARI_03269"
+ /note="GTP/Mg2+ binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:206666"
+ misc_feature complement(3168110..3168151)
+ /locus_tag="SARI_03269"
+ /note="Switch I region; other site"
+ /db_xref="CDD:206666"
+ misc_feature complement(3168119..3168121)
+ /locus_tag="SARI_03269"
+ /note="G2 box; other site"
+ /db_xref="CDD:206666"
+ misc_feature complement(3168062..3168073)
+ /locus_tag="SARI_03269"
+ /note="G3 box; other site"
+ /db_xref="CDD:206666"
+ misc_feature complement(3167993..3168064)
+ /locus_tag="SARI_03269"
+ /note="Switch II region; other site"
+ /db_xref="CDD:206666"
+ misc_feature complement(3167864..3167875)
+ /locus_tag="SARI_03269"
+ /note="G4 box; other site"
+ /db_xref="CDD:206666"
+ misc_feature complement(3167789..3167797)
+ /locus_tag="SARI_03269"
+ /note="G5 box; other site"
+ /db_xref="CDD:206666"
+ gene complement(3168895..3169203)
+ /gene="hfq"
+ /locus_tag="SARI_03270"
+ CDS complement(3168895..3169203)
+ /gene="hfq"
+ /locus_tag="SARI_03270"
+ /inference="protein motif:BlastProDom:IPR005001"
+ /inference="protein motif:HMMPfam:IPR001163"
+ /inference="protein motif:HMMTigr:IPR005001"
+ /inference="protein motif:superfamily:IPR010920"
+ /inference="similar to AA sequence:INSD:AAO71861.1"
+ /note="Stimulates the elongation of poly(A) tails"
+ /codon_start=1
+ /transl_table=11
+ /product="RNA-binding protein Hfq"
+ /protein_id="YP_001572248.1"
+ /db_xref="GI:161505136"
+ /db_xref="InterPro:IPR001163"
+ /db_xref="InterPro:IPR005001"
+ /db_xref="InterPro:IPR010920"
+ /translation="MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVI
+ LLKNTVSQMVYKHAISTVVPSRPVSHHSNNAGGGTSNNYHHGSNAQGSGAQQDSEETE
+ "
+ misc_feature complement(3169012..3169188)
+ /gene="hfq"
+ /locus_tag="SARI_03270"
+ /note="bacterial Hfq-like; Region: Hfq; cd01716"
+ /db_xref="CDD:212463"
+ misc_feature complement(order(3169012..3169056,3169075..3169080,
+ 3169084..3169092,3169114..3169128,3169171..3169173,
+ 3169180..3169188))
+ /gene="hfq"
+ /locus_tag="SARI_03270"
+ /note="hexamer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:212463"
+ misc_feature complement(order(3169063..3169116,3169120..3169140))
+ /gene="hfq"
+ /locus_tag="SARI_03270"
+ /note="Sm1 motif; other site"
+ /db_xref="CDD:212463"
+ misc_feature complement(order(3169015..3169017,3169021..3169026,
+ 3169048..3169050,3169066..3169068,3169105..3169119,
+ 3169129..3169131))
+ /gene="hfq"
+ /locus_tag="SARI_03270"
+ /note="RNA binding site [nucleotide binding]; other site"
+ /db_xref="CDD:212463"
+ misc_feature complement(3169018..3169053)
+ /gene="hfq"
+ /locus_tag="SARI_03270"
+ /note="Sm2 motif; other site"
+ /db_xref="CDD:212463"
+ gene complement(3169286..3170236)
+ /gene="miaA"
+ /locus_tag="SARI_03271"
+ CDS complement(3169286..3170236)
+ /gene="miaA"
+ /locus_tag="SARI_03271"
+ /inference="protein motif:BlastProDom:IPR002627"
+ /inference="protein motif:BlastProDom:IPR011593"
+ /inference="protein motif:HMMPanther:IPR002627"
+ /inference="protein motif:HMMPfam:IPR002627"
+ /inference="protein motif:HMMTigr:IPR002627"
+ /inference="similar to AA sequence:REFSEQ:NP_463221.1"
+ /note="IPP transferase; isopentenyltransferase; involved
+ in tRNA modification; in Escherichia coli this enzyme
+ catalyzes the addition of a delta2-isopentenyl group from
+ dimethylallyl diphosphate to the N6-nitrogen of adenosine
+ adjacent to the anticodon of tRNA species that read codons
+ starting with uracil; further tRNA modifications may
+ occur; mutations in miaA result in defects in translation
+ efficiency and fidelity"
+ /codon_start=1
+ /transl_table=11
+ /product="tRNA delta(2)-isopentenylpyrophosphate
+ transferase"
+ /protein_id="YP_001572249.1"
+ /db_xref="GI:161505137"
+ /db_xref="InterPro:IPR002627"
+ /db_xref="InterPro:IPR011593"
+ /translation="MNDVSKASLPKAIFLMGPTASGKTALAIELRKVLPVELISVDSA
+ LIYRGMDIGTAKPSADELKAAPHRLLNIRDPSQAYSAADFRRDALAQMAEITAAGRIP
+ LLVGGTMLYFKALLEGLSPLPSADPEVRSRIEQQAAELGWELLHQQLQEIDPVAAARI
+ HPNDPQRLSRALEVFFISGKTLTELTQTSGDALPYQVHQFAIAPASRELLHQRIELRF
+ HQMLASGFEAEVRALFARGDLHTDLPSIRCVGYRQMWSYIEGEISYDEMVYRGVCATR
+ QLAKRQMTWLRGWEGVRWLDSENPDRARKEVLQVVGAIAD"
+ misc_feature complement(3169298..3170218)
+ /gene="miaA"
+ /locus_tag="SARI_03271"
+ /note="tRNA delta(2)-isopentenylpyrophosphate transferase;
+ Reviewed; Region: miaA; PRK00091"
+ /db_xref="CDD:234626"
+ misc_feature complement(3169295..3170215)
+ /gene="miaA"
+ /locus_tag="SARI_03271"
+ /note="tRNA delta(2)-isopentenylpyrophosphate transferase
+ [Translation, ribosomal structure and biogenesis]; Region:
+ MiaA; COG0324"
+ /db_xref="CDD:223401"
+ gene complement(3170229..3172085)
+ /gene="mutL"
+ /locus_tag="SARI_03272"
+ CDS complement(3170229..3172085)
+ /gene="mutL"
+ /locus_tag="SARI_03272"
+ /inference="protein motif:Gene3D:IPR003594"
+ /inference="protein motif:HMMPanther:IPR002099"
+ /inference="protein motif:HMMPfam:IPR003594"
+ /inference="protein motif:HMMPfam:IPR013507"
+ /inference="protein motif:HMMTigr:IPR002099"
+ /inference="protein motif:ScanRegExp:IPR002099"
+ /inference="protein motif:superfamily:IPR003594"
+ /note="This protein is involved in the repair of
+ mismatches in DNA. It is required for dam-dependent
+ methyl-directed DNA mismatch repair. Promotes the
+ formation of a stable complex between two or more
+ DNA-binding proteins in an ATP-dependent manner without
+ itself being part of a final effector complex"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA mismatch repair protein"
+ /protein_id="YP_001572250.1"
+ /db_xref="GI:161505138"
+ /db_xref="InterPro:IPR002099"
+ /db_xref="InterPro:IPR003594"
+ /db_xref="InterPro:IPR013507"
+ /translation="MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDI
+ DIERGGAKLIRIRDNGCGIKKEELALALARHATSKIASLDDLEAIISLGFRGEALASI
+ SSVSRLTLTSRTAEQSEAWQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKF
+ MRTEKTEFNHIDEIIRRIALARFDVTLNLSHNGKLVRQYRAVARDGQKERRLGAICGT
+ PFLEQALAIEWQHGDLTLRGWVADPNHTTTALAEIQYCYVNGRMMRDRLINHAIRQAC
+ EEKLGADQQPAFVLYLEIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQT
+ ETTLPLEEIAPAPRHVPENRIAAGRNHFAEPVVPTAAREPATPRYSGGASGGSGGRQS
+ VGGWSHAQPGYQKQQGEVYRALLQTPAASSTPEPVAPALDGHSQSFGRVLTIVGGDCA
+ LLEHGGNIQLLSLPVAERWLRQAQLTPGQSPVCAQPLLIPLRLKVSADEKASLQKAQP
+ FLGELGIEFQSDAQHVTIRAVPLPLRQQNLQILIPELIGYLAQQTTFATVNIAQWIAR
+ NVQSEHPQWSMAQAISLLADVERLCPQLVKAPPGGLLQPVDLHSAMNALKHE"
+ misc_feature complement(3170232..3172085)
+ /gene="mutL"
+ /locus_tag="SARI_03272"
+ /note="DNA mismatch repair protein; Reviewed; Region:
+ mutL; PRK00095"
+ /db_xref="CDD:234630"
+ misc_feature complement(<3171786..3172019)
+ /gene="mutL"
+ /locus_tag="SARI_03272"
+ /note="Histidine kinase-like ATPases; This family includes
+ several ATP-binding proteins for example: histidine
+ kinase, DNA gyrase B, topoisomerases, heat shock protein
+ HSP90, phytochrome-like ATPases and DNA mismatch repair
+ proteins; Region: HATPase_c; cd00075"
+ /db_xref="CDD:238030"
+ misc_feature complement(order(3171789..3171800,3171897..3171902,
+ 3171906..3171908,3171912..3171914,3171918..3171920,
+ 3171978..3171980,3171987..3171989,3171999..3172001))
+ /gene="mutL"
+ /locus_tag="SARI_03272"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature complement(3171987..3171989)
+ /gene="mutL"
+ /locus_tag="SARI_03272"
+ /note="Mg2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature complement(order(3171792..3171794,3171798..3171800,
+ 3171900..3171902,3171906..3171908))
+ /gene="mutL"
+ /locus_tag="SARI_03272"
+ /note="G-X-G motif; other site"
+ /db_xref="CDD:238030"
+ misc_feature complement(3171093..3171464)
+ /gene="mutL"
+ /locus_tag="SARI_03272"
+ /note="MutL_Trans_MutL: transducer domain, having a
+ ribosomal S5 domain 2-like fold, found in proteins similar
+ to Escherichia coli MutL. EcMutL belongs to the DNA
+ mismatch repair (MutL/MLH1/PMS2) family. This transducer
+ domain is homologous to the second...; Region:
+ MutL_Trans_MutL; cd03482"
+ /db_xref="CDD:239564"
+ misc_feature complement(3171165..3171167)
+ /gene="mutL"
+ /locus_tag="SARI_03272"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:239564"
+ misc_feature complement(3170391..3170777)
+ /gene="mutL"
+ /locus_tag="SARI_03272"
+ /note="MutL C terminal dimerisation domain; Region:
+ MutL_C; pfam08676"
+ /db_xref="CDD:219965"
+ gene complement(3172095..3173411)
+ /locus_tag="SARI_03273"
+ CDS complement(3172095..3173411)
+ /locus_tag="SARI_03273"
+ /inference="protein motif:HMMPfam:IPR002508"
+ /inference="protein motif:HMMSmart:IPR002508"
+ /inference="similar to AA sequence:REFSEQ:NP_463219.1"
+ /note="'KEGG: stm:STM4358 3.7e-221 amiB;
+ N-acetylmuramoyl-l-alanine amidase II, a murein hydrolase
+ K01448;
+ COG: COG0860 N-acetylmuramoyl-L-alanine amidase;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="N-acetylmuramoyl-l-alanine amidase II"
+ /protein_id="YP_001572251.1"
+ /db_xref="GI:161505139"
+ /db_xref="InterPro:IPR002508"
+ /translation="MIYRIKNVVIAALILLCAQAGAASLSDIQVSNGEQQARITFSFI
+ GEPEYAYSQDGKRTVALDIRQTGVIQGLPLQFSGNNLVKTIRAGTPKDAQSLRLLVEL
+ TEDGKTEAVKRQNGGNYTVIFTINADVPPPPPVVAKRVESAPSPTEPARNPFKSTHDR
+ LTGVTSSNTVTRPAARASRGAGDKVVIAIDAGHGGQDPGAIGPGGTREKNVTIAIARK
+ LRTLLNNDPMFKGVLTRDGDYFISVMGRSDVARKQNANFLVSIHADAAPNRDATGASV
+ WVLSNRRANSEMANWLEQHEKQSELLGGAGDVLANSQSDPYLSQAVLDLQFGHSQRVG
+ YDVATNVLSQLDGVGSLHKRLPEHASLGVLRSPDIPSILVETGFISNHGEERLLASDR
+ YQQQLAEAIYKGLRKYFEAHPIQSAPQGDPGQTASTNSPGGMTAAN"
+ misc_feature complement(3172098..3173411)
+ /locus_tag="SARI_03273"
+ /note="N-acetylmuramoyl-l-alanine amidase II; Provisional;
+ Region: PRK10431"
+ /db_xref="CDD:236692"
+ misc_feature complement(3172197..3172856)
+ /locus_tag="SARI_03273"
+ /note="N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA
+ (also known as peptidoglycan aminohydrolase, NAMLA
+ amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC
+ 3.5.1.28) is an autolysin that hydrolyzes the amide bond
+ between N-acetylmuramoyl and L-amino...; Region:
+ MurNAc-LAA; cd02696"
+ /db_xref="CDD:119407"
+ misc_feature complement(order(3172287..3172289,3172626..3172628,
+ 3172788..3172790,3172833..3172835))
+ /locus_tag="SARI_03273"
+ /note="active site"
+ /db_xref="CDD:119407"
+ misc_feature complement(order(3172626..3172628,3172788..3172790,
+ 3172833..3172835))
+ /locus_tag="SARI_03273"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:119407"
+ gene complement(3173428..3173889)
+ /locus_tag="SARI_03274"
+ CDS complement(3173428..3173889)
+ /locus_tag="SARI_03274"
+ /inference="protein motif:HMMPfam:IPR003442"
+ /inference="protein motif:HMMPIR:IPR012298"
+ /inference="protein motif:HMMTigr:IPR003442"
+ /inference="similar to AA sequence:INSD:CAD06834.1"
+ /note="possibly involved in cell wall synthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="putative ATPase"
+ /protein_id="YP_001572252.1"
+ /db_xref="GI:161505140"
+ /db_xref="InterPro:IPR003442"
+ /db_xref="InterPro:IPR012298"
+ /translation="MMNQVIPLPDEQATLDLGQRVANACDGATVIYLYGDLGAGKTTF
+ SRGFLQALGHNGNVKSPTYTLVEPYALDNMMVYHFDLYRLADPEELEFMGIRDYFAND
+ AICLVEWPQQGKGVLPDPDVEIHIDYQAQGREARVSAVSPSGRSLLARLAG"
+ misc_feature complement(3173431..3173889)
+ /locus_tag="SARI_03274"
+ /note="ADP-binding protein; Provisional; Region: PRK10646"
+ /db_xref="CDD:182615"
+ gene complement(3173861..3175393)
+ /locus_tag="SARI_03276"
+ CDS complement(3173861..3175393)
+ /locus_tag="SARI_03276"
+ /inference="protein motif:HMMPfam:IPR000631"
+ /inference="protein motif:HMMPfam:IPR004443"
+ /inference="protein motif:HMMTigr:IPR000631"
+ /inference="protein motif:HMMTigr:IPR004443"
+ /inference="protein motif:ScanRegExp:IPR000631"
+ /inference="protein motif:ScanRegExp:IPR000875"
+ /inference="similar to AA sequence:INSD:AAL23176.1"
+ /note="'KEGG: reh:H16_A1504 1.3e-69 predicted sugar kinase
+ K00924;
+ COG: COG0063 Predicted sugar kinase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572253.1"
+ /db_xref="GI:161505142"
+ /db_xref="InterPro:IPR000631"
+ /db_xref="InterPro:IPR000875"
+ /db_xref="InterPro:IPR004443"
+ /translation="MKKNPASIPHSIWPADDIKRLERDAADAFGLTLYELMLRAGDAA
+ FRIARDIYPDARHWLVLCGHGNNGGDGYVVARLAQAAGISVTLLAQENDKALPEEAAL
+ ARDAWLNAGGIIHAADIIWPEATDLIIDALLGTGIAQAPRPPVASLIEQANAHPAPVV
+ AVDIPSGLLAQTGATPGAVMKAAHTVTFIALKPGLLTGKARDVTGVLHYDALGLEGWL
+ ASQTPPLRRFDATQLGQWLMPRRPTSHKGEHGRLAIIGGDLGTAGAIRMAGEAALRAG
+ AGLVRVLTRGENIAPLLTARPELMAHELTPQSLEESLTWADVVVIGPGLGQQAWGKKA
+ LQKVENVRKPMLWDADALNLLAINPDKRHNRVITPHPGEAARLLGCSVAEIESDRLLS
+ AQRLVKRYGGVVVLKGAGTIVAAEHHPLAIIDAGNAGMASGGMGDVLSGIIGALLGQK
+ FTPYDAACVGCVAHGAAADLLAARYGARGMLATDLFTTLRRIVNPDVIDVNHDESSNS
+ AT"
+ misc_feature complement(3173885..3175393)
+ /locus_tag="SARI_03276"
+ /note="putative carbohydrate kinase; Provisional; Region:
+ PRK10565"
+ /db_xref="CDD:182554"
+ misc_feature complement(3174770..3175369)
+ /locus_tag="SARI_03276"
+ /note="Uncharacterized conserved protein [Function
+ unknown]; Region: COG0062"
+ /db_xref="CDD:223140"
+ misc_feature complement(3174035..3174670)
+ /locus_tag="SARI_03276"
+ /note="B.subtilis YXKO protein of unknown function and
+ related proteins. Based on the conservation of the ATP
+ binding site, the substrate binding site and the
+ Mg2+binding site and structural homology this group is a
+ member of the ribokinase-like superfamily; Region:
+ YXKO-related; cd01171"
+ /db_xref="CDD:238576"
+ misc_feature complement(order(3174083..3174085,3174092..3174094,
+ 3174593..3174595))
+ /locus_tag="SARI_03276"
+ /note="putative substrate binding site [chemical binding];
+ other site"
+ /db_xref="CDD:238576"
+ misc_feature complement(order(3174077..3174079,3174086..3174091,
+ 3174173..3174175,3174284..3174286))
+ /locus_tag="SARI_03276"
+ /note="putative ATP binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:238576"
+ gene 3175392..3176546
+ /locus_tag="SARI_03275"
+ CDS 3175392..3176546
+ /locus_tag="SARI_03275"
+ /inference="protein motif:HMMPfam:IPR001450"
+ /inference="protein motif:HMMPfam:IPR013542"
+ /inference="protein motif:HMMTigr:IPR004453"
+ /inference="protein motif:ScanRegExp:IPR001450"
+ /inference="protein motif:superfamily:IPR009051"
+ /inference="similar to AA sequence:REFSEQ:YP_219218.1"
+ /note="'COG: COG1600 Uncharacterized Fe-S protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572254.1"
+ /db_xref="GI:161505141"
+ /db_xref="InterPro:IPR001450"
+ /db_xref="InterPro:IPR004453"
+ /db_xref="InterPro:IPR009051"
+ /db_xref="InterPro:IPR013542"
+ /translation="MLWSIMSEPLDLNQLAQNIKQWGLELGFQQVGITDTDLSASEPA
+ LQAWLDKQYHGEMAWMARHGIMRARPHELLPGTLRVISVRMNYLPANAAFASTLKNPT
+ LGYVSRYALGRDYHKLLRSRLKKLGERIQQHCGSLNFRPFVDSAPILERPLAEKAGLG
+ WTGKHSLILNRDAGSFFFLGELLIDLPLPVDQPIEEGCGKCVACMTICPTGAIVEPYT
+ VDARRCISYLTIELEGAIPVAFRPLIGNRIYGCDDCQLICPWNRYSQLTDEDDFSPRK
+ ALRAPELIDLFRWSETQFLKVTEGSAIRRIGHLRWLRNVAVALGNAPWSDAVIAALES
+ RKGEHPLLDEHIEWAVAQQIEKRNACINEVQLPKKQRLVRVIEKGLVRDA"
+ misc_feature 3175446..3176450
+ /locus_tag="SARI_03275"
+ /note="epoxyqueuosine reductase; Region: TIGR00276"
+ /db_xref="CDD:213520"
+ misc_feature 3175590..3175826
+ /locus_tag="SARI_03275"
+ /note="Domain of unknown function (DUF1730); Region:
+ DUF1730; pfam08331"
+ /db_xref="CDD:149403"
+ unsure 3176762..3177075
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(3176818..3176890)
+ /locus_tag="SARI_03277"
+ tRNA complement(3176818..3176890)
+ /locus_tag="SARI_03277"
+ /product="tRNA-Gly"
+ gene complement(3176930..3177002)
+ /locus_tag="SARI_03278"
+ tRNA complement(3176930..3177002)
+ /locus_tag="SARI_03278"
+ /product="tRNA-Gly"
+ gene complement(3177044..3177116)
+ /locus_tag="SARI_03279"
+ tRNA complement(3177044..3177116)
+ /locus_tag="SARI_03279"
+ /product="tRNA-Gly"
+ gene 3177523..3178263
+ /locus_tag="SARI_03280"
+ CDS 3177523..3178263
+ /locus_tag="SARI_03280"
+ /inference="protein motif:HMMPfam:IPR001638"
+ /inference="protein motif:HMMSmart:IPR001320"
+ /inference="protein motif:HMMSmart:IPR001638"
+ /inference="protein motif:ScanRegExp:IPR001638"
+ /inference="similar to AA sequence:REFSEQ:NP_463215.1"
+ /note="'KEGG: eci:UTI89_C2121 1.5e-25 fliY;
+ cystine-binding periplasmic protein precursor
+ K02030:K02424;
+ COG: COG0834 ABC-type amino acid transport/signal
+ transduction systems, periplasmic component/domain;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572255.1"
+ /db_xref="GI:161505143"
+ /db_xref="InterPro:IPR001320"
+ /db_xref="InterPro:IPR001638"
+ /translation="MKKKLIAMLLASLSVHAASVSAKILHFGTSATYAPYEFVDADNK
+ IVGFDIDVANAVCKEMQAECSFTNQSFDSLIPGLRFRKFDAVIAGMDMTPKREQQVSF
+ SQPYYEGLSAVVVTRKGAYHTFADLKGKKVGLENGTTHQRYLQDKQKAITPVAYDSYL
+ NAFTDLKNNRLEGVFGDVAAIGKWLKNNPDYAIMDERASDPDYYGEGLGIAVRKGNDA
+ LLQEINAALDKVKASPEYAQMQEKWFMQ"
+ misc_feature 3177523..3178260
+ /locus_tag="SARI_03280"
+ /note="putative ABC transporter arginine-biding protein;
+ Provisional; Region: PRK15007"
+ /db_xref="CDD:184969"
+ misc_feature 3177601..3178254
+ /locus_tag="SARI_03280"
+ /note="Bacterial periplasmic transport systems use
+ membrane-bound complexes and substrate-bound,
+ membrane-associated, periplasmic binding proteins (PBPs)
+ to transport a wide variety of substrates, such as, amino
+ acids, peptides, sugars, vitamins and inorganic...;
+ Region: PBPb; cd00134"
+ /db_xref="CDD:238078"
+ misc_feature order(3177619..3177621,3177733..3177735,3177808..3177810,
+ 3177937..3177939,3178051..3178053)
+ /locus_tag="SARI_03280"
+ /note="substrate binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:238078"
+ misc_feature order(3178000..3178002,3178012..3178014,3178030..3178032)
+ /locus_tag="SARI_03280"
+ /note="membrane-bound complex binding site; other site"
+ /db_xref="CDD:238078"
+ misc_feature 3178132..3178149
+ /locus_tag="SARI_03280"
+ /note="hinge residues; other site"
+ /db_xref="CDD:238078"
+ gene complement(3178325..3178870)
+ /locus_tag="SARI_03281"
+ CDS complement(3178325..3178870)
+ /locus_tag="SARI_03281"
+ /inference="protein motif:HMMPfam:IPR013520"
+ /inference="protein motif:HMMSmart:IPR006055"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:INSD:AAV79907.1"
+ /note="3'-5' exoribonuclease specific for small
+ oligoribonuclotides"
+ /codon_start=1
+ /transl_table=11
+ /product="oligoribonuclease"
+ /protein_id="YP_001572256.1"
+ /db_xref="GI:161505144"
+ /db_xref="InterPro:IPR006055"
+ /db_xref="InterPro:IPR012337"
+ /db_xref="InterPro:IPR013520"
+ /translation="MSADENNLIWIDLEMTGLDPERDRIIEIATLVTDASLNILAEGP
+ TIAVHQSDAQLALMDDWNVRTHTGSGLVDRVKASTMGERDAELATIEFLKTWVPAGKS
+ PICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEILAGFTKQGTHQA
+ MDDIRESVAELAYYREHFIKL"
+ misc_feature complement(3178334..3178849)
+ /locus_tag="SARI_03281"
+ /note="DEDDh 3'-5' exonuclease domain of
+ oligoribonuclease and similar proteins; Region: Orn;
+ cd06135"
+ /db_xref="CDD:99838"
+ misc_feature complement(order(3178382..3178384,3178397..3178399,
+ 3178535..3178537,3178829..3178831,3178835..3178837))
+ /locus_tag="SARI_03281"
+ /note="catalytic site [active]"
+ /db_xref="CDD:99838"
+ misc_feature complement(order(3178382..3178384,3178397..3178399,
+ 3178535..3178543,3178547..3178552,3178820..3178822,
+ 3178826..3178837))
+ /locus_tag="SARI_03281"
+ /note="putative active site [active]"
+ /db_xref="CDD:99838"
+ misc_feature complement(order(3178382..3178384,3178397..3178399,
+ 3178538..3178543,3178547..3178552,3178820..3178822,
+ 3178826..3178837))
+ /locus_tag="SARI_03281"
+ /note="putative substrate binding site [chemical binding];
+ other site"
+ /db_xref="CDD:99838"
+ misc_feature complement(order(3178334..3178339,3178343..3178345,
+ 3178436..3178441,3178454..3178456,3178463..3178465,
+ 3178472..3178474,3178478..3178483,3178520..3178522,
+ 3178529..3178531,3178538..3178543,3178766..3178768))
+ /locus_tag="SARI_03281"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:99838"
+ gene 3178953..3180029
+ /locus_tag="SARI_03282"
+ CDS 3178953..3180029
+ /locus_tag="SARI_03282"
+ /inference="protein motif:HMMPfam:IPR004881"
+ /inference="protein motif:HMMTigr:IPR004881"
+ /inference="similar to AA sequence:REFSEQ:YP_153218.1"
+ /note="EngC; RsgA; CpgA; circularly permuted GTPase;
+ ribosome small subunit-dependent GTPase A; has the pattern
+ G4-G1-G3 as opposed to other GTPases; interacts strongly
+ with 30S ribosome which stimulates GTPase activity"
+ /codon_start=1
+ /transl_table=11
+ /product="ribosome-associated GTPase"
+ /protein_id="YP_001572257.1"
+ /db_xref="GI:161505145"
+ /db_xref="InterPro:IPR004881"
+ /translation="MGDQEPIRLSKNKLSKGQQRRVNANHQRRLKTSAEKADYDDNLF
+ GEPAEGIVISRFGMHADVESADGEVHRCNIRRTIRSLVTGDRVVWRPGKAAAEGVNVK
+ GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVGCETLQ
+ VEPLIVLNKIDLLDDEGMDFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTDRIS
+ IFAGQSGVGKSSLLNALLGLQDEILTNDVSNVSGLGQHTTTAARLYHFPHGGDVIDSP
+ GVREFGLWHLEPEQITQGFVEFHDYLGHCKYRDCKHDADPGCAIREAVENGAIAETRF
+ ENYHRILESMAQVKTRKNFSDTDD"
+ misc_feature 3178980..3180026
+ /locus_tag="SARI_03282"
+ /note="GTPase RsgA; Reviewed; Region: PRK12288"
+ /db_xref="CDD:237039"
+ misc_feature 3179094..3179303
+ /locus_tag="SARI_03282"
+ /note="S1_like: Ribosomal protein S1-like RNA-binding
+ domain. Found in a wide variety of RNA-associated
+ proteins. Originally identified in S1 ribosomal protein.
+ This superfamily also contains the Cold Shock Domain
+ (CSD), which is a homolog of the S1 domain; Region:
+ S1_like; cl09927"
+ /db_xref="CDD:245202"
+ misc_feature order(3179109..3179111,3179133..3179135,3179163..3179165)
+ /locus_tag="SARI_03282"
+ /note="RNA binding site [nucleotide binding]; other site"
+ /db_xref="CDD:238094"
+ misc_feature 3179337..3179978
+ /locus_tag="SARI_03282"
+ /note="Ribosomal interacting GTPase YjeQ/EngC, a
+ circularly permuted subfamily of the Ras GTPases; Region:
+ YjeQ_EngC; cd01854"
+ /db_xref="CDD:206747"
+ misc_feature order(3179388..3179393,3179400..3179405,3179409..3179414,
+ 3179421..3179426,3179529..3179531,3179820..3179822,
+ 3179832..3179834,3179838..3179840,3179949..3179951,
+ 3179958..3179960,3179970..3179972)
+ /locus_tag="SARI_03282"
+ /note="GTPase/Zn-binding domain interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:206747"
+ misc_feature order(3179454..3179459,3179463..3179468,3179547..3179552,
+ 3179625..3179642)
+ /locus_tag="SARI_03282"
+ /note="GTP/Mg2+ binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:206747"
+ misc_feature 3179454..3179465
+ /locus_tag="SARI_03282"
+ /note="G4 box; other site"
+ /db_xref="CDD:206747"
+ misc_feature 3179547..3179555
+ /locus_tag="SARI_03282"
+ /note="G5 box; other site"
+ /db_xref="CDD:206747"
+ misc_feature 3179616..3179639
+ /locus_tag="SARI_03282"
+ /note="G1 box; other site"
+ /db_xref="CDD:206747"
+ misc_feature 3179715..3179738
+ /locus_tag="SARI_03282"
+ /note="Switch I region; other site"
+ /db_xref="CDD:206747"
+ misc_feature 3179724..3179726
+ /locus_tag="SARI_03282"
+ /note="G2 box; other site"
+ /db_xref="CDD:206747"
+ misc_feature 3179772..3179783
+ /locus_tag="SARI_03282"
+ /note="G3 box; other site"
+ /db_xref="CDD:206747"
+ misc_feature 3179778..3179786
+ /locus_tag="SARI_03282"
+ /note="Switch II region; other site"
+ /db_xref="CDD:206747"
+ unsure 3179173..3179181
+ /locus_tag="SARI_03282"
+ /note="Sequence derived from one plasmid subclone"
+ gene 3180122..3181090
+ /gene="psd"
+ /locus_tag="SARI_03283"
+ CDS 3180122..3181090
+ /gene="psd"
+ /locus_tag="SARI_03283"
+ /inference="protein motif:HMMPanther:IPR005221"
+ /inference="protein motif:HMMPfam:IPR003817"
+ /inference="protein motif:HMMTigr:IPR005221"
+ /inference="similar to AA sequence:INSD:AAL23171.1"
+ /note="catalyzes the decarboxylation of
+ phosphatidyl-L-serine to phosphatidylethanoleamine"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphatidylserine decarboxylase"
+ /protein_id="YP_001572258.1"
+ /db_xref="GI:161505146"
+ /db_xref="InterPro:IPR003817"
+ /db_xref="InterPro:IPR005221"
+ /translation="MLNSFKLSLQYILPKLWLTRLAGWGASKRAGWLTKLVIDLFVKY
+ YKVDMTETQKPDTASYRTFNDFFVRPLRDDVRPLNTDPNILVMPADGVISQLGRIEED
+ KILQAKGHNYSLEALLAGNYLMADKFRNGTFVTTYLSPRDYHRVHMPCNGILREMIYV
+ PGELFSVNHLTAQNVPNLFARNERVICLFDTEFGPMAQILVGATIVGSIETVWAGTIT
+ PPREGIIKRWTWPAGENEDSVALLKGQEMGRFKLGSTVINLFAPGKVDLIESLANLSV
+ TKIGQPLATSTEAFVAPEVEPVPLPEEEIKAEHDASPLVDDKKDET"
+ misc_feature 3180122..3180982
+ /gene="psd"
+ /locus_tag="SARI_03283"
+ /note="phosphatidylserine decarboxylase; Reviewed; Region:
+ psd; PRK00044"
+ /db_xref="CDD:234591"
+ gene 3181133..3184435
+ /locus_tag="SARI_03284"
+ CDS 3181133..3184435
+ /locus_tag="SARI_03284"
+ /inference="protein motif:HMMPfam:IPR006685"
+ /inference="protein motif:ScanRegExp:IPR006686"
+ /inference="protein motif:superfamily:IPR010920"
+ /inference="protein motif:superfamily:IPR011014"
+ /inference="protein motif:superfamily:IPR011066"
+ /note="'KEGG: rno:113960 8.2e-08 Cdc42bpb; Cdc42 binding
+ protein kinase beta K08286;
+ COG: COG3264 Small-conductance mechanosensitive channel;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572259.1"
+ /db_xref="GI:161505147"
+ /db_xref="InterPro:IPR006685"
+ /db_xref="InterPro:IPR006686"
+ /db_xref="InterPro:IPR010920"
+ /db_xref="InterPro:IPR011014"
+ /db_xref="InterPro:IPR011066"
+ /translation="MAWCLSTGALAATAPEVKQITQELEQAKAAKPPQPEVVEALQSA
+ LNALEERKGSLERAKQYQYVIDNFPKLSATLRAQLNNLRDEPRSVPPEMSTEALNQEI
+ LQVSSQLLDKTREAQQEQERAREIADSLSQLPQQQNDARRQLNVIERRLGAAGGSASL
+ SLAQNLSMQAESAKLKALVDELELAQLSANNRQELARLRSELAEKQSQQLDAYLQALR
+ NQLNSLRQREAERALESTELLAENSAGLPKGIVEQFKVNRELSQALNQQAQRMDLVAS
+ QQRQAASQTLQVRQALNTLREQSKWLGVSNMLGEALRAQVARLPEMPKPQQLDTEMAQ
+ LRVHRMRYEELLNKQPQLRQIRQADGQPLTAEQNRILDAQLRTQRELLNALLQGGDTL
+ ILELTKLKVSNSQLEDALKEVNEATHRYLFWTADVSPLSLSWPVDLVQDLRRLISLDT
+ FNQLGKASIMMLTSKETLLPLFAALVLVGFSLYSRQHFNRFLERSASRIGKVTQDHFS
+ LTLRTLFWSILVASPLPVLWATLGYGLQAAWPYPLAVAIGDGVTATVPLLWVVMICAA
+ FARPGGLFVAHFGWPRNRVAKAMRYYLMSIGLIVPLIMAVIMFDNLNDREFSGSLGRL
+ CFILICGALALVTLSLKKAGIPLYLDKAGNGDNMVNSLLWNMLMGAPLIAILAAAVGY
+ LATAQALLARLETSVAIWFLLLVIYHVIRRWMLIQRRRLAFDRAKHRRAEMLAQRARG
+ EEEPAHASSLEGAVDIDESEIDLDAISAQSLRLVRSILMLIALLSVIVLWSEIHSAFG
+ FLENISLWDVTSTVQGVESLEPITLGAVLIAILVFIITTQLVRNLPALLELALLQHLD
+ LTPGTGYAITTITKYLLMLIGGLVGFSMIGIEWSKLQWLVAALGVGLGFGLQEIFANF
+ ISGLIILFEKPIRIGDTVTIRDLTGSVTKINTRATTISDWDRKEIIVPNKAFITEQFI
+ NWSLSDSVTRVVLTIPAPADANSEEVTQILLTAAQRCSLVLDNPPPEIFLVDLQQGIQ
+ IFELRIYAAEMGHRMPLRHEIHQLILAGFREHGIDMPFPPFQMRLESLGGKQTGRTLT
+ SAGKTSRPAGSL"
+ misc_feature 3181133..3184432
+ /locus_tag="SARI_03284"
+ /note="putative mechanosensitive channel protein;
+ Provisional; Region: PRK10929"
+ /db_xref="CDD:236798"
+ misc_feature <3181679..>3181987
+ /locus_tag="SARI_03284"
+ /note="The Bin/Amphiphysin/Rvs (BAR) domain, a
+ dimerization module that binds membranes and detects
+ membrane curvature; Region: BAR; cl12013"
+ /db_xref="CDD:245835"
+ misc_feature 3182525..3183550
+ /locus_tag="SARI_03284"
+ /note="Mechanosensitive ion channel inner membrane domain
+ 1; Region: MscS_TM; pfam12794"
+ /db_xref="CDD:221775"
+ misc_feature 3183734..3184330
+ /locus_tag="SARI_03284"
+ /note="Mechanosensitive ion channel; Region: MS_channel;
+ pfam00924"
+ /db_xref="CDD:201506"
+ gene complement(3184578..3184754)
+ /locus_tag="SARI_03285"
+ CDS complement(3184578..3184754)
+ /locus_tag="SARI_03285"
+ /inference="similar to AA sequence:INSD:CAD06826.1"
+ /note="'COG: NOG14153 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572260.1"
+ /db_xref="GI:161505148"
+ /translation="MSIGTLRDRDEDKWKHVSDIYCAYVIRCLVFRGELVGYGDLFRM
+ RYSEINLPVADLDA"
+ gene complement(3184736..3184954)
+ /locus_tag="SARI_03286"
+ CDS complement(3184736..3184954)
+ /locus_tag="SARI_03286"
+ /inference="similar to AA sequence:INSD:CAD06826.1"
+ /note="'COG: NOG14153 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572261.1"
+ /db_xref="GI:161505149"
+ /translation="MPDKTQRVASGVYCLMENVMNDSSRDPIITEDEVRALNFTPEDI
+ LEIEKVILSSVHVTRRKVAMVVECLLAR"
+ gene complement(3184962..3186464)
+ /locus_tag="SARI_03287"
+ CDS complement(3184962..3186464)
+ /locus_tag="SARI_03287"
+ /inference="protein motif:HMMPanther:IPR002293"
+ /inference="protein motif:HMMPfam:IPR004841"
+ /inference="similar to AA sequence:INSD:AAO71848.1"
+ /note="'KEGG: eci:UTI89_C0120 3.8e-05 aroP; aromatic amino
+ acid transport protein AroP K03293;
+ COG: COG0531 Amino acid transporters;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572262.1"
+ /db_xref="GI:161505150"
+ /db_xref="InterPro:IPR002293"
+ /db_xref="InterPro:IPR004841"
+ /translation="MTHTIKKMSLIGLILMIFTSVFGFANSPSAFYLMGYSAIPWYIF
+ SALLFFIPFALMMAEMGSAYRKEEGGIYSWMNNSVGPRYAFIGTFMWFSSYVIWMVST
+ AAKVWVPFSTFVFGADMTQYWDFAGLEATQVVGLLAVGWMILVTCVAVRGINKIARIT
+ AVGGIAVMCLNLVLLLVSVAILLLNGGHFAQEINFTSSPNPGYHSGLAMLSFVVFAIF
+ AYGGIEAVGGLVDKTEKPEKNFAKGIVFAAIVISIGYSLAIFLWGVSTNWQQILSNSA
+ VNLGNITYILMSSLGTTLGNALNLSPEAAMTVGVWFARITGLSMFLAYTGAFFTLSYS
+ PLKAIIQGTPKALWPASVTTLNANGMPATAMCLQCVLVSLFILLVSFGGDTASAFYNK
+ LTLMANVSMTLPYLFLALAFPFFKARQDLERPFVLFKTKACTLVATGVVVLVVTFANV
+ FTIIQPVIEAGDWDSALWMIGGPIFFSLLAMAIYQNYSSRMSADPEWAAE"
+ misc_feature complement(3184986..3186464)
+ /locus_tag="SARI_03287"
+ /note="inner membrane transporter YjeM; Provisional;
+ Region: PRK15238"
+ /db_xref="CDD:237929"
+ gene complement(3186385..3186612)
+ /locus_tag="SARI_03288"
+ CDS complement(3186385..3186612)
+ /locus_tag="SARI_03288"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572263.1"
+ /db_xref="GI:161505151"
+ /translation="MLPQYRAGYFVLFRYQSCIDLFIADLCKKKAAPIGERRLANVLE
+ RKGWLNDPHYKKDEPYWAYPDDFYFCFWFCE"
+ misc_feature complement(<3186427..3186570)
+ /locus_tag="SARI_03288"
+ /note="voltage-dependent potassium channel beta subunit,
+ animal; Region: Kv_beta; TIGR01293"
+ /db_xref="CDD:213602"
+ gene complement(3186689..3187666)
+ /locus_tag="SARI_03289"
+ CDS complement(3186689..3187666)
+ /locus_tag="SARI_03289"
+ /inference="protein motif:HMMPfam:IPR004364"
+ /inference="protein motif:HMMTigr:IPR004525"
+ /inference="similar to AA sequence:REFSEQ:YP_153214.1"
+ /note="lysine--tRNA ligase beta chain; poxA; class II
+ aminoacyl tRNA synthetase; catalyzes a two-step reaction;
+ first charging a lysine molecule by linking the carboxyl
+ group to the alpha-phosphate of ATP; second by transfer of
+ the aminoacyl-adenylate to its tRNA"
+ /codon_start=1
+ /transl_table=11
+ /product="lysyl-tRNA synthetase"
+ /protein_id="YP_001572264.1"
+ /db_xref="GI:161505152"
+ /db_xref="InterPro:IPR004364"
+ /db_xref="InterPro:IPR004525"
+ /translation="MSETATWQPSASVPNLLKRAAIMTEIRRFFADRGVLEVETPCMS
+ QATVTDIHLFPFETRFVGPGHSQGMNLYLMTSPEYHMKRLLAAGCGPVFQLCRSFRNE
+ EMGRYHNPEFTMLEWYRPHYDMYRLMNEVDDLLQQVLDCQPAESLSYQQAFQRHLEID
+ PLSADKTQLREAAAKLDVSNIADTEEDRDTLLQLLFTVGVEPHIGKEKPTFIYHFPAS
+ QASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQ
+ QPIDNHLLDALKAGMPDCSGVALGVDRLVMLALGAERLADVIAFTVDRA"
+ misc_feature complement(3186716..3187633)
+ /locus_tag="SARI_03289"
+ /note="poxB regulator PoxA; Provisional; Region: PRK09350"
+ /db_xref="CDD:236474"
+ misc_feature complement(3186707..3187621)
+ /locus_tag="SARI_03289"
+ /note="Class II tRNA amino-acyl synthetase-like catalytic
+ core domain. Class II amino acyl-tRNA synthetases (aaRS)
+ share a common fold and generally attach an amino acid to
+ the 3' OH of ribose of the appropriate tRNA. PheRS
+ is an exception in that it...; Region:
+ class_II_aaRS-like_core; cl00268"
+ /db_xref="CDD:241739"
+ misc_feature complement(3187550..3187564)
+ /locus_tag="SARI_03289"
+ /note="motif 1; other site"
+ /db_xref="CDD:238391"
+ misc_feature complement(order(3187271..3187273,3187364..3187366,
+ 3187370..3187372,3187415..3187420,3187550..3187552,
+ 3187556..3187561))
+ /locus_tag="SARI_03289"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238391"
+ misc_feature complement(order(3186758..3186760,3186767..3186772,
+ 3186776..3186781,3186920..3186922,3186932..3186937,
+ 3187313..3187321,3187325..3187327,3187331..3187333,
+ 3187367..3187369,3187433..3187435,3187439..3187441))
+ /locus_tag="SARI_03289"
+ /note="active site"
+ /db_xref="CDD:238391"
+ misc_feature complement(3187364..3187372)
+ /locus_tag="SARI_03289"
+ /note="motif 2; other site"
+ /db_xref="CDD:238391"
+ misc_feature complement(order(3186758..3186760,3186767..3186769))
+ /locus_tag="SARI_03289"
+ /note="motif 3; other site"
+ /db_xref="CDD:238391"
+ gene 3187905..3189779
+ /locus_tag="SARI_03290"
+ CDS 3187905..3189779
+ /locus_tag="SARI_03290"
+ /inference="protein motif:FPrintScan:IPR001100"
+ /inference="protein motif:FPrintScan:IPR013027"
+ /inference="protein motif:HMMPfam:IPR003953"
+ /inference="protein motif:HMMPfam:IPR004112"
+ /inference="protein motif:HMMTigr:IPR005884"
+ /inference="protein motif:HMMTigr:IPR014006"
+ /inference="protein motif:ScanRegExp:IPR003952"
+ /inference="protein motif:superfamily:IPR004112"
+ /note="'part of four member fumarate reductase enzyme
+ complex FrdABCD which catalyzes the reduction of fumarate
+ to succinate during anaerobic respiration; FrdAB are the
+ catalytic subcomplex consisting of a flavoprotein subunit
+ and an iron-sulfur subunit, respectively; FrdCD are the
+ membrane components which interact with quinone and are
+ involved in electron transfer; the catalytic subunits are
+ similar to succinate dehydrogenase SdhAB'"
+ /codon_start=1
+ /transl_table=11
+ /product="fumarate reductase flavoprotein subunit"
+ /protein_id="YP_001572265.1"
+ /db_xref="GI:161505153"
+ /db_xref="InterPro:IPR001100"
+ /db_xref="InterPro:IPR003952"
+ /db_xref="InterPro:IPR003953"
+ /db_xref="InterPro:IPR004112"
+ /db_xref="InterPro:IPR005884"
+ /db_xref="InterPro:IPR013027"
+ /db_xref="InterPro:IPR014006"
+ /translation="METHSYSAEPRGFIWLREDEITIIWRNVVQTFQADLAIIGAGGA
+ GLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFDYHFHDTVAGG
+ DWLCEQDVVDYFVHHCPTEMTQLEQWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKT
+ GFHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDNHARGLVAMNMMEGTLVQIRANAVV
+ MATGGAGRVYRYNTNGGIVTGDGMGMALSHGVPLRDMEFVQYHPTGLPGSGILMTEGC
+ RGEGGILVNKNGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFWHEWRKGNTIS
+ TPRGDVVHLDLRHLGEKKLHERLPFICELAKAYVGVDPVKEPIPVRPTAHYTMGGIET
+ DQNCESRVKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQAMERAATAGTAN
+ SAALDAQVADIEQRLKNLVNQEGNENWSKIRDEMGLSMEEGCGIYRTPELMQKTLDKL
+ AELQERFKRVRISDTSSVFNTDLLYTIELGHGLNVAECMAHSALARKESRGAHQRLDE
+ GCTERDDVNFLKHTLAFRDADGTTRLEYSDVKITTLPPAKRVYGGEAEAADKKEKANG
+ "
+ misc_feature 3188094..3189737
+ /locus_tag="SARI_03290"
+ /note="fumarate reductase flavoprotein subunit; Validated;
+ Region: PRK09231"
+ /db_xref="CDD:236421"
+ misc_feature 3188118..3189215
+ /locus_tag="SARI_03290"
+ /note="L-aspartate oxidase; Provisional; Region: PRK06175"
+ /db_xref="CDD:180442"
+ misc_feature 3189345..3189731
+ /locus_tag="SARI_03290"
+ /note="Fumarate reductase flavoprotein C-term; Region:
+ Succ_DH_flav_C; pfam02910"
+ /db_xref="CDD:217281"
+ gene 3189772..3190506
+ /locus_tag="SARI_03291"
+ CDS 3189772..3190506
+ /locus_tag="SARI_03291"
+ /inference="protein motif:Gene3D:IPR012285"
+ /inference="protein motif:Gene3D:IPR012675"
+ /inference="protein motif:HMMPfam:IPR001450"
+ /inference="protein motif:HMMPIR:IPR004489"
+ /inference="protein motif:HMMTigr:IPR004489"
+ /inference="protein motif:ScanRegExp:IPR001450"
+ /inference="protein motif:ScanRegExp:IPR006058"
+ /inference="protein motif:superfamily:IPR001041"
+ /inference="protein motif:superfamily:IPR009051"
+ /inference="similar to AA sequence:REFSEQ:YP_219208.1"
+ /note="'part of four member fumarate reductase enzyme
+ complex FrdABCD which catalyzes the reduction of fumarate
+ to succinate during anaerobic respiration; FrdAB are the
+ catalytic subcomplex consisting of a flavoprotein subunit
+ and an iron-sulfur subunit, respectively; FrdCD are the
+ membrane components which interact with quinone and are
+ involved in electron transfer; the catalytic subunits are
+ similar to succinate dehydrogenase SdhAB'"
+ /codon_start=1
+ /transl_table=11
+ /product="fumarate reductase iron-sulfur subunit"
+ /protein_id="YP_001572266.1"
+ /db_xref="GI:161505154"
+ /db_xref="InterPro:IPR001041"
+ /db_xref="InterPro:IPR001450"
+ /db_xref="InterPro:IPR004489"
+ /db_xref="InterPro:IPR006058"
+ /db_xref="InterPro:IPR009051"
+ /db_xref="InterPro:IPR012285"
+ /db_xref="InterPro:IPR012675"
+ /translation="MAEMKNLKVEVVRYNPETDTAPHSAFYEVPYDETTSLLDALGYI
+ KDNLSPDLSYRWSCRMAICGSCGMMVNNVPKLACKTFLRDYTNGMKVEALANFPIERD
+ LVVDMTHFIESLEAIKPYIIGNSRTPAQGPNVQTPAQMAKYHQFSGCINCGLCYAACP
+ QFGLNPEFIGPAAITLAHRYNEDSRDHGKKERMAQLNSPNGVWTCTFVGYCSEVCPKH
+ VDPAAAIQQGKVESSKDFLIATLKPR"
+ misc_feature 3189772..3190503
+ /locus_tag="SARI_03291"
+ /note="fumarate reductase iron-sulfur subunit;
+ Provisional; Region: PRK12385"
+ /db_xref="CDD:183490"
+ misc_feature 3189793..3190107
+ /locus_tag="SARI_03291"
+ /note="2Fe-2S iron-sulfur cluster binding domain; Region:
+ Fer2_3; pfam13085"
+ /db_xref="CDD:221911"
+ gene 3190550..3190912
+ /locus_tag="SARI_03292"
+ CDS 3190550..3190912
+ /locus_tag="SARI_03292"
+ /inference="protein motif:BlastProDom:IPR003510"
+ /inference="protein motif:HMMPfam:IPR003510"
+ /inference="similar to AA sequence:SwissProt:P67639"
+ /note="'part of four member fumarate reductase enzyme
+ complex FrdABCD which catalyzes the reduction of fumarate
+ to succinate during anaerobic respiration; FrdAB are the
+ catalytic subcomplex consisting of a flavoprotein subunit
+ and an iron-sulfur subunit, respectively; FrdCD are the
+ membrane components which interact with quinone and are
+ involved in electron transfer; the catalytic subunits are
+ similar to succinate dehydrogenase SdhAB'"
+ /codon_start=1
+ /transl_table=11
+ /product="fumarate reductase subunit C"
+ /protein_id="YP_001572267.1"
+ /db_xref="GI:161505155"
+ /db_xref="InterPro:IPR003510"
+ /translation="MTSTWWKKLPFYRFYMLREGTAVPAVWFSIELIFGLFALKHGAE
+ SWMGFVGFLQNPVVVILNLITLAAALLHTKTWFELAPKAANIIVKDEKMGPEPIIKGL
+ WVVTAVVTVVILYVALFW"
+ misc_feature 3190550..3190858
+ /locus_tag="SARI_03292"
+ /note="Quinol:fumarate reductase (QFR) Type D subfamily,
+ 15kD hydrophobic subunit C; QFR couples the reduction of
+ fumarate to succinate to the oxidation of quinol to
+ quinone, the opposite reaction to that catalyzed by the
+ related protein, succinate:quinine...; Region:
+ QFR_TypeD_subunitC; cd00546"
+ /db_xref="CDD:238306"
+ misc_feature order(3190550..3190552,3190556..3190558,3190562..3190564,
+ 3190574..3190576,3190580..3190585,3190592..3190594,
+ 3190601..3190606,3190610..3190612,3190616..3190618,
+ 3190631..3190636,3190646..3190648,3190658..3190660,
+ 3190664..3190669,3190685..3190687,3190709..3190711,
+ 3190733..3190735,3190745..3190747,3190763..3190768,
+ 3190775..3190777,3190784..3190786,3190793..3190798,
+ 3190802..3190804)
+ /locus_tag="SARI_03292"
+ /note="D-subunit interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238306"
+ misc_feature order(3190550..3190552,3190574..3190576,3190580..3190585,
+ 3190592..3190594,3190601..3190603,3190784..3190786,
+ 3190793..3190795,3190802..3190804)
+ /locus_tag="SARI_03292"
+ /note="Iron-sulfur protein interface; other site"
+ /db_xref="CDD:238306"
+ misc_feature order(3190601..3190606,3190775..3190777,3190784..3190786)
+ /locus_tag="SARI_03292"
+ /note="proximal quinone binding site [chemical binding];
+ other site"
+ /db_xref="CDD:238306"
+ gene 3190923..3191282
+ /locus_tag="SARI_03293"
+ CDS 3190923..3191282
+ /locus_tag="SARI_03293"
+ /inference="protein motif:BlastProDom:IPR003418"
+ /inference="protein motif:HMMPfam:IPR003418"
+ /inference="protein motif:HMMPIR:IPR003418"
+ /inference="similar to AA sequence:INSD:CAD06820.1"
+ /note="in conjunction with FrdC acts to anchor the
+ catalytic components of the fumarate reductase to the
+ cytoplasmic membrane"
+ /codon_start=1
+ /transl_table=11
+ /product="fumarate reductase subunit D"
+ /protein_id="YP_001572268.1"
+ /db_xref="GI:161505156"
+ /db_xref="InterPro:IPR003418"
+ /translation="MINPNPKRSDEPVFWGLFGAGGMWGAIIAPVIVLLVGIMLPLGL
+ FPGDALSFERVLTFAQSFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFY
+ GLAAILTVVTAIGVITL"
+ misc_feature 3190935..3191279
+ /locus_tag="SARI_03293"
+ /note="Quinol:fumarate reductase (QFR) Type D subfamily,
+ 13kD hydrophobic subunit D; QFR couples the reduction of
+ fumarate to succinate to the oxidation of quinol to
+ quinone, the opposite reaction to that catalyzed by the
+ related protein, succinate:quinine...; Region:
+ QFR_TypeD_subunitD; cd00547"
+ /db_xref="CDD:238307"
+ misc_feature order(3190944..3190949,3190956..3190958,3190965..3190967,
+ 3191187..3191189)
+ /locus_tag="SARI_03293"
+ /note="Iron-sulfur protein interface; other site"
+ /db_xref="CDD:238307"
+ misc_feature order(3190965..3190967,3190974..3190979)
+ /locus_tag="SARI_03293"
+ /note="proximal quinone binding site [chemical binding];
+ other site"
+ /db_xref="CDD:238307"
+ misc_feature order(3190986..3190988,3190998..3191000,3191043..3191045,
+ 3191076..3191078,3191082..3191084,3191088..3191090,
+ 3191097..3191099,3191136..3191138,3191166..3191171,
+ 3191187..3191195,3191256..3191258,3191277..3191279)
+ /locus_tag="SARI_03293"
+ /note="C-subunit interface; other site"
+ /db_xref="CDD:238307"
+ misc_feature order(3191016..3191018,3191028..3191030,3191082..3191087,
+ 3191094..3191096)
+ /locus_tag="SARI_03293"
+ /note="distal quinone binding site; other site"
+ /db_xref="CDD:238307"
+ gene 3191394..3191927
+ /locus_tag="SARI_03294"
+ CDS 3191394..3191927
+ /locus_tag="SARI_03294"
+ /inference="protein motif:Gene3D:IPR012674"
+ /inference="protein motif:HMMPfam:IPR013208"
+ /inference="protein motif:ScanRegExp:IPR002345"
+ /inference="protein motif:superfamily:IPR011038"
+ /inference="similar to AA sequence:REFSEQ:YP_219205.1"
+ /note="lipocalin; globomycin-sensitive outer membrane
+ lipoprotein"
+ /codon_start=1
+ /transl_table=11
+ /product="outer membrane lipoprotein Blc"
+ /protein_id="YP_001572269.1"
+ /db_xref="GI:161505157"
+ /db_xref="InterPro:IPR002345"
+ /db_xref="InterPro:IPR011038"
+ /db_xref="InterPro:IPR012674"
+ /db_xref="InterPro:IPR013208"
+ /translation="MRLLPVVAAVTAAFLVVACSSPTPPKGVTVVNNFDAKRYLGTWY
+ EIARLDHRFERGLEQVTASYSLRNDGGLNVINKGYNPDRGMWQKTEGKAYFTGSPNRA
+ ALKVSFFGPFYGGYNVIALDREYRHALVCGPDRDYLWILSRTPTLSEEIKQQMLAVAT
+ REGFDVNKLIWVKQSGS"
+ misc_feature 3191394..3191924
+ /locus_tag="SARI_03294"
+ /note="outer membrane lipoprotein Blc; Provisional;
+ Region: PRK10477"
+ /db_xref="CDD:182489"
+ misc_feature 3191493..3191915
+ /locus_tag="SARI_03294"
+ /note="Lipocalin-like domain; Region: Lipocalin_2;
+ pfam08212"
+ /db_xref="CDD:116798"
+ gene complement(3191944..3192261)
+ /locus_tag="SARI_03295"
+ CDS complement(3191944..3192261)
+ /locus_tag="SARI_03295"
+ /inference="protein motif:HMMPfam:IPR000390"
+ /inference="similar to AA sequence:SwissProt:Q7CP98"
+ /note="'member of the SMR family of proton-dependent drug
+ efflux transporters; quaternary ammonium compound efflux
+ pump; confers resistance to cetylpyridinium,
+ cetyldimethylethyl ammonium and cetrimide cations'"
+ /codon_start=1
+ /transl_table=11
+ /product="quaternary ammonium compound-resistance protein
+ SugE"
+ /protein_id="YP_001572270.1"
+ /db_xref="GI:161505158"
+ /db_xref="InterPro:IPR000390"
+ /translation="MSWIILLIAGLLEVVWAVGLKYTHGFSRLTPSIITITAMIISMA
+ LLSWAMKTLPVGTAYAIWTGIGAVGAAITGILLLGESASPTRLLSLGLIVAGIIGLKL
+ STH"
+ misc_feature complement(3191947..3192261)
+ /locus_tag="SARI_03295"
+ /note="multidrug efflux system protein; Provisional;
+ Region: PRK11431"
+ /db_xref="CDD:171110"
+ gene 3192518..3193105
+ /locus_tag="SARI_03296"
+ CDS 3192518..3193105
+ /locus_tag="SARI_03296"
+ /inference="protein motif:BlastProDom:IPR000792"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000792"
+ /inference="protein motif:HMMSmart:IPR000792"
+ /inference="protein motif:ScanRegExp:IPR000792"
+ /inference="protein motif:superfamily:IPR011006"
+ /inference="similar to AA sequence:REFSEQ:NP_458776.1"
+ /note="'KEGG: ava:Ava_2028 0.00024 two component
+ transcriptional regulator, LuxR family;
+ COG: COG2771 DNA-binding HTH domain-containing proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572271.1"
+ /db_xref="GI:161505159"
+ /db_xref="InterPro:IPR000792"
+ /db_xref="InterPro:IPR011006"
+ /db_xref="InterPro:IPR011991"
+ /translation="MLKILVIDRCHFTRTGIEAWLNHTDVLSSSLLVSGMNNLILAKE
+ HILQWKPHLVIADLYGFLNDALPTQPINAFFAACGMTPLLLLQSGNMPYRSQYASHAV
+ LSKHTPLHEIAQRIKGALCTHPLQEAPENATALLSPQEEKVLAMWTEGTSNKEIGYAL
+ GIHGKTVYTYKRNIRMKLHMDNRYSPFLMLPKRID"
+ misc_feature 3192524..3193066
+ /locus_tag="SARI_03296"
+ /note="Response regulator containing a CheY-like receiver
+ domain and an HTH DNA-binding domain [Signal transduction
+ mechanisms / Transcription]; Region: CitB; COG2197"
+ /db_xref="CDD:225107"
+ misc_feature 3192923..3193069
+ /locus_tag="SARI_03296"
+ /note="C-terminal DNA-binding domain of LuxR-like
+ proteins. This domain contains a helix-turn-helix motif
+ and binds DNA. Proteins belonging to this group are
+ response regulators; some act as transcriptional
+ activators, others as transcriptional repressors. Many...;
+ Region: LuxR_C_like; cd06170"
+ /db_xref="CDD:99777"
+ misc_feature order(3192926..3192934,3192971..3192979,3193001..3193006,
+ 3193010..3193015,3193019..3193033,3193064..3193066)
+ /locus_tag="SARI_03296"
+ /note="DNA binding residues [nucleotide binding]"
+ /db_xref="CDD:99777"
+ misc_feature order(3192959..3192961,3192965..3192967,3192971..3192973,
+ 3193064..3193069)
+ /locus_tag="SARI_03296"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99777"
+ gene complement(3193325..3193492)
+ /locus_tag="SARI_03297"
+ CDS complement(3193325..3193492)
+ /locus_tag="SARI_03297"
+ /note="'Psort location: extracellular, including cell
+ wall, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572272.1"
+ /db_xref="GI:161505160"
+ /translation="MSRWFFLLVHYSQRVIPDEDIQHPGHSPSPRSQLITSRLPKIRR
+ SPVIFWDVVYY"
+ gene complement(3193575..3194141)
+ /locus_tag="SARI_03298"
+ CDS complement(3193575..3194141)
+ /locus_tag="SARI_03298"
+ /inference="protein motif:HMMPfam:IPR001059"
+ /inference="protein motif:HMMPfam:IPR013185"
+ /inference="protein motif:HMMPIR:IPR011768"
+ /inference="protein motif:HMMTigr:IPR011768"
+ /inference="protein motif:ScanRegExp:IPR013852"
+ /inference="protein motif:superfamily:IPR008991"
+ /inference="protein motif:superfamily:IPR008994"
+ /inference="similar to AA sequence:INSD:AAO71837.1"
+ /note="Involved in peptide bond synthesis; alters the
+ affinity of the ribosome for aminoacyl-tRNA"
+ /codon_start=1
+ /transl_table=11
+ /product="elongation factor P"
+ /protein_id="YP_001572273.1"
+ /db_xref="GI:161505161"
+ /db_xref="InterPro:IPR001059"
+ /db_xref="InterPro:IPR008991"
+ /db_xref="InterPro:IPR008994"
+ /db_xref="InterPro:IPR011768"
+ /db_xref="InterPro:IPR013185"
+ /db_xref="InterPro:IPR013852"
+ /translation="MATYYSNDFRSGLKIMLDGEPYAVESSEFVKPGKGQAFARVKLR
+ RLLTGTRVEKTFKSTDSAEGADVVDMNLTYLYNDGEFWHFMNNETFEQLSADAKAIGD
+ NAKWLLDQAECIVTLWNGQPISVTPPNFVELEIVDTDPGLKGDTAGTGGKPATLSTGA
+ VVKVPLFVQIGEVIKVDTRSGEYVSRVK"
+ misc_feature complement(3193578..3194126)
+ /locus_tag="SARI_03298"
+ /note="elongation factor P; Validated; Region: PRK00529"
+ /db_xref="CDD:234788"
+ misc_feature complement(3193959..3194126)
+ /locus_tag="SARI_03298"
+ /note="Elongation factor P (EF-P) KOW-like domain; Region:
+ EFP_N; pfam08207"
+ /db_xref="CDD:203876"
+ misc_feature complement(3193758..3193937)
+ /locus_tag="SARI_03298"
+ /note="S1_EF-P_repeat_1: Translation elongation factor P
+ (EF-P), S1-like RNA-binding domain, repeat 1. EF-P
+ stimulates the peptidyltransferase activity in the
+ prokaryotic 70S ribosome. EF-P enhances the synthesis of
+ certain dipeptides with...; Region: S1_EF-P_repeat_1;
+ cd04470"
+ /db_xref="CDD:239916"
+ misc_feature complement(order(3193776..3193781,3193794..3193796,
+ 3193869..3193871))
+ /locus_tag="SARI_03298"
+ /note="RNA binding site [nucleotide binding]; other site"
+ /db_xref="CDD:239916"
+ misc_feature complement(3193584..3193751)
+ /locus_tag="SARI_03298"
+ /note="S1_EF-P_repeat_2: Translation elongation factor P
+ (EF-P), S1-like RNA-binding domain, repeat 1. EF-P
+ stimulates the peptidyltransferase activity in the
+ prokaryotic 70S ribosome. EF-P enhances the synthesis of
+ certain dipeptides with...; Region: S1_EF-P_repeat_2;
+ cd05794"
+ /db_xref="CDD:240220"
+ misc_feature complement(order(3193593..3193598,3193611..3193613,
+ 3193662..3193664))
+ /locus_tag="SARI_03298"
+ /note="RNA binding site [nucleotide binding]; other site"
+ /db_xref="CDD:240220"
+ gene 3194182..3195210
+ /locus_tag="SARI_03299"
+ CDS 3194182..3195210
+ /locus_tag="SARI_03299"
+ /inference="protein motif:HMMPfam:IPR007197"
+ /inference="protein motif:HMMTigr:IPR003739"
+ /inference="similar to AA sequence:REFSEQ:YP_219199.1"
+ /note="'KEGG: eci:UTI89_C4744 3.0e-162 yjeK; hypothetical
+ protein YjeK K01843;
+ COG: COG1509 Lysine 2,3-aminomutase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572274.1"
+ /db_xref="GI:161505162"
+ /db_xref="InterPro:IPR003739"
+ /db_xref="InterPro:IPR007197"
+ /translation="MAHIVTLNTPLREDWLAQLADVVTNPDELLHLLQIEANEKLRAG
+ QDARHLFALRVPRAFIARMEKGNPDDPLLRQVLTSQDEFIVAPGFSTDPLEEQHSVVP
+ GLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQGNKRNWKVALEYIAAHPELDEI
+ IFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPVVIPARITNELVARFDQSRL
+ QILLVNHTNHANEVDEAFCLAMKKLRRVGVTLLNQSVLLRGVNDNAKTLANLSNALFD
+ AGVMPYYLHVLDKVQGAAHFMITDDEARQIMRELLTLVSGYMVPRLAREIGGEPSKTP
+ LDLQLRQQ"
+ misc_feature 3194185..3195207
+ /locus_tag="SARI_03299"
+ /note="Lysine 2,3-aminomutase [Amino acid transport and
+ metabolism]; Region: KamA; COG1509"
+ /db_xref="CDD:224426"
+ misc_feature 3194521..3195114
+ /locus_tag="SARI_03299"
+ /note="Radical SAM superfamily. Enzymes of this family
+ generate radicals by combining a 4Fe-4S cluster and
+ S-adenosylmethionine (SAM) in close proximity. They are
+ characterized by a conserved CxxxCxxC motif, which
+ coordinates the conserved iron-sulfur cluster; Region:
+ Radical_SAM; cd01335"
+ /db_xref="CDD:100105"
+ misc_feature order(3194539..3194541,3194545..3194547,3194551..3194553,
+ 3194557..3194565,3194668..3194670,3194674..3194679,
+ 3194761..3194769,3194842..3194844,3194944..3194946,
+ 3195037..3195042)
+ /locus_tag="SARI_03299"
+ /note="FeS/SAM binding site; other site"
+ /db_xref="CDD:100105"
+ gene 3195491..3196363
+ /locus_tag="SARI_03300"
+ CDS 3195491..3196363
+ /locus_tag="SARI_03300"
+ /inference="similar to AA sequence:INSD:AAL23155.1"
+ /note="'COG: NOG06800 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572275.1"
+ /db_xref="GI:161505163"
+ /translation="MALTVKALNTGVIRHNDKFIALALKVKSLRNKETLLFFPVLALR
+ DLLIGLEQRLYLQHSLAEQEEEKRQKTKISHVRKMHENIPAIAREELENADINQRVES
+ LALSDNSEDVLTFSLNLHNGSQLDLQIGEWQVEVLVMAIIHAINNAEMRELALRISSM
+ LDFLPLYDADCLENGNLEFYTYNQPNWKHNLYNHYLALVYRYTDESGQSHDCGTIIKT
+ RSPSGSKEAEAISRRLLNFSPRLKKLVGKPCKIFVRTPGTGKAARLTQDQCMRALHNL
+ RMAYRRKNVNHIAL"
+ gene complement(3196395..3196760)
+ /locus_tag="SARI_03301"
+ CDS complement(3196395..3196760)
+ /locus_tag="SARI_03301"
+ /inference="similar to AA sequence:INSD:AAL23154.1"
+ /note="'COG: NOG09783 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572276.1"
+ /db_xref="GI:161505164"
+ /translation="MGNNMHVKYLAGIVGAALLMAGCSSSNELTAAGQNVRFVEDKPG
+ AECQLIGTATGKQSNWFSGQHGEEGGSMRGAANDLRNQAAAMGGNVLYGVSSPSQGML
+ SSFVPTASEMNGQVYKCPN"
+ misc_feature complement(3196404..3196685)
+ /locus_tag="SARI_03301"
+ /note="Domain of unknown function (DUF4156); Region:
+ DUF4156; pfam13698"
+ /db_xref="CDD:205873"
+ gene complement(3197008..3198654)
+ /gene="groEL"
+ /locus_tag="SARI_03302"
+ CDS complement(3197008..3198654)
+ /gene="groEL"
+ /locus_tag="SARI_03302"
+ /inference="protein motif:FPrintScan:IPR001844"
+ /inference="protein motif:FPrintScan:IPR002423"
+ /inference="protein motif:HMMPanther:IPR002423"
+ /inference="protein motif:HMMPfam:IPR002423"
+ /inference="protein motif:HMMTigr:IPR012723"
+ /inference="protein motif:ScanRegExp:IPR001844"
+ /inference="protein motif:superfamily:IPR008950"
+ /inference="similar to AA sequence:INSD:CAD06810.1"
+ /note="'60 kDa chaperone family; promotes refolding of
+ misfolded polypeptides especially under stressful
+ conditions; forms two stacked rings of heptamers to form a
+ barrel-shaped 14mer; ends can be capped by GroES;
+ misfolded proteins enter the barrel where they are
+ refolded when GroES binds; many bacteria have multiple
+ copies of the groEL gene which are active under different
+ environmental conditions; the B.japonicum protein in this
+ cluster is expressed constitutively; in Rhodobacter,
+ Corynebacterium and Rhizobium this protein is essential
+ for growth'"
+ /codon_start=1
+ /transl_table=11
+ /product="chaperonin GroEL"
+ /protein_id="YP_001572277.1"
+ /db_xref="GI:161505165"
+ /db_xref="InterPro:IPR001844"
+ /db_xref="InterPro:IPR002423"
+ /db_xref="InterPro:IPR008950"
+ /db_xref="InterPro:IPR012723"
+ /translation="MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSF
+ GAPNITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITE
+ GLKAVAAGMNPMDLKRGIDKAVAAAVEELKALSVPCSDSKAIAQVGTISANSDETVGK
+ LIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESP
+ FILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAV
+ KAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIID
+ GVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEK
+ KARVEDALHATRAAVEEGVVAGGGVALIRVASKIADLKGQNEDQNVGIKVALRAMEAP
+ LRQIVLNCGEEPSVVANTVKGGDGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAA
+ SVAGLMITTECMVTDLPKSDAPDLGAAGGMGGMGGMGGMM"
+ misc_feature complement(3197065..3198651)
+ /gene="groEL"
+ /locus_tag="SARI_03302"
+ /note="chaperonin GroEL; Reviewed; Region: groEL;
+ PRK12849"
+ /db_xref="CDD:237230"
+ misc_feature complement(3197086..3198645)
+ /gene="groEL"
+ /locus_tag="SARI_03302"
+ /note="GroEL_like type I chaperonin. Chaperonins are
+ involved in productive folding of proteins. They share a
+ common general morphology, a double toroid of 2 stacked
+ rings, each composed of 7-9 subunits. The symmetry of type
+ I is seven-fold and they are found...; Region: GroEL;
+ cd03344"
+ /db_xref="CDD:239460"
+ misc_feature complement(order(3197089..3197109,3197116..3197118,
+ 3197278..3197280,3197497..3197499,3197503..3197505,
+ 3197884..3197886,3197968..3197970,3198064..3198066,
+ 3198427..3198429,3198436..3198438,3198448..3198450,
+ 3198472..3198474,3198478..3198480,3198508..3198510,
+ 3198514..3198519,3198532..3198534,3198538..3198549,
+ 3198580..3198582,3198631..3198633,3198643..3198645))
+ /gene="groEL"
+ /locus_tag="SARI_03302"
+ /note="ring oligomerisation interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:239460"
+ misc_feature complement(order(3197170..3197172,3197176..3197178,
+ 3197293..3197295,3197410..3197412,3197461..3197463,
+ 3198205..3198207,3198382..3198384,3198394..3198396,
+ 3198556..3198564))
+ /gene="groEL"
+ /locus_tag="SARI_03302"
+ /note="ATP/Mg binding site [chemical binding]; other site"
+ /db_xref="CDD:239460"
+ misc_feature complement(order(3197254..3197256,3197263..3197268,
+ 3197272..3197274,3197299..3197301,3197353..3197355,
+ 3198328..3198330))
+ /gene="groEL"
+ /locus_tag="SARI_03302"
+ /note="stacking interactions; other site"
+ /db_xref="CDD:239460"
+ misc_feature complement(order(3197425..3197430,3197530..3197532,
+ 3198076..3198078,3198097..3198099,3198232..3198234))
+ /gene="groEL"
+ /locus_tag="SARI_03302"
+ /note="hinge regions; other site"
+ /db_xref="CDD:239460"
+ gene complement(3198698..3198991)
+ /gene="groES"
+ /locus_tag="SARI_03303"
+ CDS complement(3198698..3198991)
+ /gene="groES"
+ /locus_tag="SARI_03303"
+ /inference="protein motif:BlastProDom:IPR001476"
+ /inference="protein motif:Gene3D:IPR001476"
+ /inference="protein motif:HMMPanther:IPR001476"
+ /inference="protein motif:HMMPfam:IPR001476"
+ /inference="protein motif:ScanRegExp:IPR001476"
+ /inference="protein motif:superfamily:IPR011032"
+ /inference="similar to AA sequence:INSD:AAO71832.1"
+ /note="10 kDa chaperonin; Cpn10; GroES; forms
+ homoheptameric ring; binds to one or both ends of the
+ GroEL double barrel in the presence of adenine nucleotides
+ capping it; folding of unfolded substrates initiates in a
+ GroEL-substrate bound and capped by GroES; release of the
+ folded substrate is dependent on ATP binding and
+ hydrolysis in the trans ring"
+ /codon_start=1
+ /transl_table=11
+ /product="co-chaperonin GroES"
+ /protein_id="YP_001572278.1"
+ /db_xref="GI:161505166"
+ /db_xref="InterPro:IPR001476"
+ /db_xref="InterPro:IPR011032"
+ /translation="MSIRPLHDRVIVKRKEVESKSAGGIVLTGSAAGKSTRGEIIAVG
+ KGRILDNGTVQPLDVKVGDIVIFNDGYGVKSEKIDNEEVLIMSESDILAIVEA"
+ misc_feature complement(3198707..3198988)
+ /gene="groES"
+ /locus_tag="SARI_03303"
+ /note="Chaperonin 10 Kd subunit (cpn10 or GroES); Cpn10
+ cooperates with chaperonin 60 (cpn60 or GroEL), an ATPase,
+ to assist the folding and assembly of proteins and is
+ found in eubacterial cytosol, as well as in the matrix of
+ mitochondria and chloroplasts. It...; Region: cpn10;
+ cd00320"
+ /db_xref="CDD:238197"
+ misc_feature complement(order(3198710..3198718,3198764..3198766,
+ 3198773..3198775,3198788..3198790,3198818..3198820,
+ 3198881..3198886,3198965..3198967,3198974..3198976,
+ 3198980..3198982,3198986..3198988))
+ /gene="groES"
+ /locus_tag="SARI_03303"
+ /note="oligomerisation interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:238197"
+ misc_feature complement(3198899..3198940)
+ /gene="groES"
+ /locus_tag="SARI_03303"
+ /note="mobile loop; other site"
+ /db_xref="CDD:238197"
+ misc_feature complement(order(3198824..3198826,3198857..3198859))
+ /gene="groES"
+ /locus_tag="SARI_03303"
+ /note="roof hairpin; other site"
+ /db_xref="CDD:238197"
+ unsure 3198707..3198838
+ /note="Sequence derived from one plasmid subclone"
+ gene 3199267..3200508
+ /locus_tag="SARI_03304"
+ CDS 3199267..3200508
+ /locus_tag="SARI_03304"
+ /inference="protein motif:HMMPanther:IPR002293"
+ /inference="protein motif:HMMPfam:IPR004841"
+ /inference="similar to AA sequence:INSD:AAL23151.1"
+ /note="uncharacterized member of the APC superfamily of
+ amino acid transporters; unknown function"
+ /codon_start=1
+ /transl_table=11
+ /product="inner membrane protein YjeH"
+ /protein_id="YP_001572279.1"
+ /db_xref="GI:161505167"
+ /db_xref="InterPro:IPR002293"
+ /db_xref="InterPro:IPR004841"
+ /translation="MNELKKDLGLVQGVILLTTSLLGTGVFALPELAALAAGNISLWA
+ WPLLIILIFPIAIVFAVLGRHFPHAGGVAHFVGMAFGPRLQRVISWLFLSVIPVSFPA
+ ALHIAVGFGQALFGWRSEQLLFGELGTIGLLWFMGSRGASSSANLQAIIAGLIIALIA
+ AILWKGAFNPTNITFPTASEITFSQLCTALAIIFWGFVGIEAFTHLSSEFKNPERDFP
+ RALIIGLMLAGSIYWACTAVVLHFGVYSEKIAATASLPIIIVHLFGIQALWVACIIGY
+ LTCFASLNVYAQSFARLIWTQMQYKPDHYLAQLSSGRLPLHALNAILASCCVSSLVVY
+ ALRINLNALIVYANGIFIMLYLLCMLAGCRLLKGRCHVLAVTSCLLCLLLLVMVGWKS
+ LYAIIMLVALWLFLPKRKRMA"
+ misc_feature 3199288..3200505
+ /locus_tag="SARI_03304"
+ /note="putative transporter; Provisional; Region:
+ PRK11021"
+ /db_xref="CDD:236823"
+ unsure 3199583..3199666
+ /locus_tag="SARI_03304"
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(3200569..3201084)
+ /gene="fxsA"
+ /locus_tag="SARI_03305"
+ CDS complement(3200569..3201084)
+ /gene="fxsA"
+ /locus_tag="SARI_03305"
+ /inference="protein motif:HMMPfam:IPR007313"
+ /inference="similar to AA sequence:REFSEQ:NP_463191.1"
+ /note="F exclusion of bacteriophage T7; overproduction of
+ this protein in Escherichia coli inhibits the F
+ plasmid-mediated exclusion of bacteriophage T7; interacts
+ with the F plasmid-encoded PifA protein; inner membrane
+ protein"
+ /codon_start=1
+ /transl_table=11
+ /product="FxsA"
+ /protein_id="YP_001572280.1"
+ /db_xref="GI:161505168"
+ /db_xref="InterPro:IPR007313"
+ /translation="MVVADGYDLQESPLRWIPFLAVFLYVYIEISIFIQVAHVLGVLM
+ TLILVMFTSVIGISLVRNQGFKNFLLMQQKMAAGESPAAEMIKSVSLIIAGLLLLLPG
+ FFTDFLGLLLLLPPVQKHLTLKLLPHLRFSRMPGGGFSAGTGGGETFDGEYQRKDDDR
+ DRIKHKDDRQD"
+ misc_feature complement(3200623..3201045)
+ /gene="fxsA"
+ /locus_tag="SARI_03305"
+ /note="Protein affecting phage T7 exclusion by the F
+ plasmid [General function prediction only]; Region: FxsA;
+ COG3030"
+ /db_xref="CDD:225574"
+ gene 3201338..3202822
+ /gene="aspA"
+ /locus_tag="SARI_03306"
+ CDS 3201338..3202822
+ /gene="aspA"
+ /locus_tag="SARI_03306"
+ /inference="protein motif:FPrintScan:IPR000362"
+ /inference="protein motif:FPrintScan:IPR003031"
+ /inference="protein motif:HMMPfam:IPR000362"
+ /inference="protein motif:HMMTigr:IPR004708"
+ /inference="protein motif:ScanRegExp:IPR000362"
+ /inference="protein motif:superfamily:IPR008948"
+ /inference="similar to AA sequence:INSD:ABB64326.1"
+ /note="catalyzes the formation of fumarate from aspartate"
+ /codon_start=1
+ /transl_table=11
+ /product="aspartate ammonia-lyase"
+ /protein_id="YP_001572281.1"
+ /db_xref="GI:161505169"
+ /db_xref="InterPro:IPR000362"
+ /db_xref="InterPro:IPR003031"
+ /db_xref="InterPro:IPR004708"
+ /db_xref="InterPro:IPR008948"
+ /translation="MCFKVKIIGSLKKKVHMSNNIRIEEDLLGTREVPAEAYYGVHTL
+ RAIENFYISNNKISDIPEFVRGMVMVKKAAALANKELQTIPKSVANAIIAACDEVLNN
+ GKCMDQFPVDVYQGGAGTSVNMNTNEVLANIGLELMGHQKGEYQYLNPNDHVNKCQST
+ NDAYPTGFRVAVYASIVKLIDAINQLREGFERKAVEFQDILKMGRTQLQDAVPMTLGQ
+ EFRAFSILLKEEVKSIERTAELLLEVNLGATAIGTGLNTPKEYSPLAVKKLAEVTGFA
+ CVPAEDLIEATSDCGAYVMVHSALKRLAVKMSKICNDLRLLSSGPRAGLNEINLPELQ
+ AGSSIMPAKVNPVVPEVVNQVCFKVIGNDTTVTMAAEAGQLQLNVMEPVIGQAMFESI
+ HILSNACYNLLEKCVNGITANKEVCEGYVYNSIGIVTYLNPFIGHHNGDIVGKICAET
+ GKSVREVVLERGLLTEAELDDIFSVQNLMHPAYKAKRYTDESEQ"
+ misc_feature 3201386..3202804
+ /gene="aspA"
+ /locus_tag="SARI_03306"
+ /note="aspartate ammonia-lyase; Provisional; Region: aspA;
+ PRK12273"
+ /db_xref="CDD:237031"
+ misc_feature 3201401..3202759
+ /gene="aspA"
+ /locus_tag="SARI_03306"
+ /note="Aspartase; Region: Aspartase; cd01357"
+ /db_xref="CDD:176462"
+ misc_feature order(3201686..3201697,3201812..3201820,3201953..3201958,
+ 3202364..3202366,3202370..3202372,3202385..3202387)
+ /gene="aspA"
+ /locus_tag="SARI_03306"
+ /note="active sites [active]"
+ /db_xref="CDD:176462"
+ misc_feature order(3201950..3201961,3201971..3201973,3201989..3201994,
+ 3202010..3202012,3202022..3202024,3202034..3202036,
+ 3202088..3202090,3202178..3202183,3202190..3202192,
+ 3202199..3202204,3202208..3202210,3202217..3202222,
+ 3202229..3202231,3202238..3202243,3202250..3202255,
+ 3202259..3202264,3202271..3202276,3202424..3202426,
+ 3202448..3202450,3202457..3202465,3202622..3202624)
+ /gene="aspA"
+ /locus_tag="SARI_03306"
+ /note="tetramer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:176462"
+ unsure 3202496..3202550
+ /gene="aspA"
+ /locus_tag="SARI_03306"
+ /note="Sequence derived from one plasmid subclone"
+ gene 3202937..3204238
+ /locus_tag="SARI_03307"
+ CDS 3202937..3204238
+ /locus_tag="SARI_03307"
+ /inference="protein motif:BlastProDom:IPR004668"
+ /inference="protein motif:HMMPfam:IPR004668"
+ /inference="protein motif:HMMPIR:IPR004668"
+ /inference="protein motif:HMMTigr:IPR004668"
+ /inference="similar to AA sequence:INSD:AAX68109.1"
+ /note="functions in anaerobic transport of
+ C4-dicarboxylate compounds such as fumarate; similar to
+ dcuB"
+ /codon_start=1
+ /transl_table=11
+ /product="anaerobic C4-dicarboxylate transporter"
+ /protein_id="YP_001572282.1"
+ /db_xref="GI:161505170"
+ /db_xref="InterPro:IPR004668"
+ /translation="MIVVELIIVLLAIFLGARLGGIGIGFAGGLGVLVLAAIGVKPGT
+ IPFDVISIIMAVIAAISAMQVAGGLDYLVNQTEKLLRKNPKYITILAPIVTYFLTIFA
+ GTGNISLATLPVIAEVAKEQGIKPCRPLSTAVVSAQIAITASPISAAVVYMSSVMEGH
+ GISYIHLLSVVIPSTLLAVLVMSFLITMLFNSKLSDDPIYRKRLEEGLIELRGEKQIE
+ IKPMAKNSVWLFLLGVVGVVIYAIINSPSLGLVEKPLMNTTNAILIIMLSVATLTTIL
+ CKVETDAILNSSTFKAGMSACICILGVAWLGDTFVSANIDWIKDTAGSVIQGHPWLLA
+ VIFFFASALLYSQAATAKALMPMALALNVSPLTAVASFAAVSGLFILPTYPTLVAAVQ
+ MDDTGTTRIGKFVFNHPFFIPGTLGVVLAVCFGFLLGSFML"
+ misc_feature 3203054..3204235
+ /locus_tag="SARI_03307"
+ /note="Anaerobic C4-dicarboxylate transporter [General
+ function prediction only]; Region: DcuB; COG2704"
+ /db_xref="CDD:225332"
+ misc_feature 3203054..3204235
+ /locus_tag="SARI_03307"
+ /note="anaerobic C4-dicarboxylate transporter; Reviewed;
+ Region: PRK09412"
+ /db_xref="CDD:236503"
+ gene 3204359..3204706
+ /locus_tag="SARI_03308"
+ CDS 3204359..3204706
+ /locus_tag="SARI_03308"
+ /inference="protein motif:HMMPfam:IPR004323"
+ /inference="similar to AA sequence:REFSEQ:NP_463188.1"
+ /note="copper binding protein required for copper
+ tolerance; involved in resistance toward heavy metals"
+ /codon_start=1
+ /transl_table=11
+ /product="divalent-cation tolerance protein CutA"
+ /protein_id="YP_001572283.1"
+ /db_xref="GI:161505171"
+ /db_xref="InterPro:IPR004323"
+ /translation="MLDVKSQDISITEAVLMLCTAPDEATAQDLAAKVLAEKLAACAT
+ LLPGATSLYYWEGKLEQEYEVQMILKTTVSHQQALIDCLKSHHPYQTPELLVLPVTHG
+ DTDYLSWLNASLR"
+ misc_feature 3204371..3204703
+ /locus_tag="SARI_03308"
+ /note="divalent-cation tolerance protein CutA;
+ Provisional; Region: PRK10645"
+ /db_xref="CDD:182614"
+ gene 3204682..3206385
+ /gene="dipZ"
+ /locus_tag="SARI_03309"
+ CDS 3204682..3206385
+ /gene="dipZ"
+ /locus_tag="SARI_03309"
+ /inference="protein motif:Gene3D:IPR012335"
+ /inference="protein motif:HMMPfam:IPR003834"
+ /inference="protein motif:HMMPfam:IPR013766"
+ /inference="protein motif:ScanRegExp:IPR006662"
+ /inference="protein motif:superfamily:IPR012336"
+ /inference="similar to AA sequence:INSD:AAV79880.1"
+ /note="two electrons are transferred from cytoplasmic
+ NADPH to thioredoxin and then to the inner membrane
+ protein DsbD which keeps the disulfide isomerase DsbC in a
+ reduced state in the oxidizing periplasm; DsbC in turns
+ rearranges incorrectly made disulfide bonds in the
+ periplasm"
+ /codon_start=1
+ /transl_table=11
+ /product="thiol:disulfide interchange protein precursor"
+ /protein_id="YP_001572284.1"
+ /db_xref="GI:161505172"
+ /db_xref="InterPro:IPR003834"
+ /db_xref="InterPro:IPR006662"
+ /db_xref="InterPro:IPR012335"
+ /db_xref="InterPro:IPR012336"
+ /db_xref="InterPro:IPR013766"
+ /translation="MAQRIFTLILLLCSTSAFAGLFDAPGRSQFVPADRAFVFDFQQN
+ QHDLTLSWQVKEGYYLYRKQISITPTKADIAAVQLPAGVWHEDEFYGKSEIYRKQLNV
+ PVTVSQATAGATLTVTYQGCADAGFCYPPETKTVPLSEVAAATDTTPAPAVPQANETS
+ KPAAQLPFSALWALLIGIGIAFTPCVLPMYPLISGIVLGGRQCLSTGRALLLAFIYVQ
+ GMALTYTALGLVVAAAGLQFQAALQHPYVLIGLAVVFTLLALSMFGLFTLQLPSSLQT
+ RLTLMSNRQQGGSPGGVFVMGAIAGLICSPCTTAPLSAILLYIAQSGNMWLGGGILYL
+ YALGMGLPLILVTVFGNRLLPKSGPWMSHVKTAFGFVILALPVFLLERIIGDVWGLRL
+ WSLLGVAFFSWGFITSLQATRAWMRIVQIILLAAALVSVRPLQDWAFGSPSAQTQAHL
+ NFTAISTVDELNQALAQAKGKPVMLDFYADWCVACKEFEKYTFSDLRVQQALDNTVLL
+ QANVTANNAQDVALLKHLQVLGLPTILFFDAQGQEQPQARVTGFMDAATFSAHLHDRQ
+ P"
+ misc_feature 3204685..3206382
+ /gene="dipZ"
+ /locus_tag="SARI_03309"
+ /note="thiol:disulfide interchange protein precursor;
+ Provisional; Region: dipZ; PRK00293"
+ /db_xref="CDD:234717"
+ misc_feature 3204763..3205098
+ /gene="dipZ"
+ /locus_tag="SARI_03309"
+ /note="Disulphide bond corrector protein DsbC; Region:
+ DsbC; pfam11412"
+ /db_xref="CDD:221107"
+ misc_feature 3205198..3205743
+ /gene="dipZ"
+ /locus_tag="SARI_03309"
+ /note="Cytochrome C biogenesis protein transmembrane
+ region; Region: DsbD; cl15788"
+ /db_xref="CDD:247070"
+ misc_feature 3206053..3206367
+ /gene="dipZ"
+ /locus_tag="SARI_03309"
+ /note="DsbD gamma family; DsbD gamma is the C-terminal
+ periplasmic domain of the bacterial protein DsbD. It
+ contains a CXXC motif in a TRX fold and shuttles the
+ reducing potential from the membrane domain (DsbD beta) to
+ the N-terminal periplasmic domain (DsbD...; Region:
+ DsbDgamma; cd02953"
+ /db_xref="CDD:239251"
+ misc_feature order(3206119..3206127,3206131..3206133,3206137..3206139,
+ 3206149..3206154,3206269..3206277,3206311..3206313,
+ 3206317..3206322,3206329..3206337,3206362..3206364)
+ /gene="dipZ"
+ /locus_tag="SARI_03309"
+ /note="DsbD alpha interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:239251"
+ misc_feature order(3206125..3206127,3206134..3206136)
+ /gene="dipZ"
+ /locus_tag="SARI_03309"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:239251"
+ gene 3206422..3206997
+ /locus_tag="SARI_03310"
+ CDS 3206422..3206997
+ /locus_tag="SARI_03310"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR001647"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:INSD:AAL23145.1"
+ /note="'COG: COG1309 Transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative transcriptional regulator"
+ /protein_id="YP_001572285.1"
+ /db_xref="GI:161505173"
+ /db_xref="InterPro:IPR001647"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /translation="MQREDILGEALKLLETQGIANTTLEMVAERVNHPLDTLQRFWPD
+ KEAILYDALRYLSQQVDIWRRQLLLDETLSAEQKLLARYSALSECVSNNRYPGCLFIA
+ ACTFYPDPAHPIHQLADQQKRAAHDFTHELLTTLEIDDPAMVARQMELVLEGCLSRML
+ VNRSQADVDTAQRLAEDILRFAQCRQGGALT"
+ misc_feature 3206422..3206994
+ /locus_tag="SARI_03310"
+ /note="putative transcriptional regulator; Provisional;
+ Region: PRK11640"
+ /db_xref="CDD:183252"
+ misc_feature 3206437..3206568
+ /locus_tag="SARI_03310"
+ /note="Bacterial regulatory proteins, tetR family; Region:
+ TetR_N; pfam00440"
+ /db_xref="CDD:201228"
+ gene 3207114..3207186
+ /locus_tag="SARI_03311"
+ tRNA 3207114..3207186
+ /locus_tag="SARI_03311"
+ /product="tRNA-Phe"
+ gene 3207340..3208599
+ /locus_tag="SARI_03312"
+ CDS 3207340..3208599
+ /locus_tag="SARI_03312"
+ /inference="protein motif:Gene3D:IPR013762"
+ /inference="protein motif:HMMPfam:IPR002104"
+ /inference="protein motif:superfamily:IPR010998"
+ /inference="protein motif:superfamily:IPR011010"
+ /inference="similar to AA sequence:INSD:ABP59151.1"
+ /note="'COG: COG0582 Integrase;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572286.1"
+ /db_xref="GI:161505174"
+ /db_xref="InterPro:IPR002104"
+ /db_xref="InterPro:IPR010998"
+ /db_xref="InterPro:IPR011010"
+ /db_xref="InterPro:IPR013762"
+ /translation="MPLTDTAIRNAKPLDKPYKLSDAQGLYLLIKPNGSKLWHLKYRF
+ GGKEKKLAFGAYPTVTLANARKLREEARAVLSAGDDPGVKKQQEKQAKKSGNTFEEVA
+ RRWLAGNIRWTEHHAAKILRSLELHVFPLIGNIPVADLKTADLLIPLRVAEKKGNLET
+ AARSQQRTTAIMRYAVQESLIASNPANDLTGAIAPPPKNHYPALPLEQIPQLLERLEG
+ YSGRLLTRLAVQLNLLIFIRSSELRFARWTEIDLDGAMWTIPTQRESIPGVRYSERGA
+ KMKTPHLVPLSKQAVTVLKQLKLLSGNSELLFPGDHDPRKPMSENTINKALRVMGYDT
+ KVDVCGHGFRTMACSALIESGRWSKDAVERQMSHQERNNVRAAYIHKAEHLDERTQMM
+ QWWSDYLDACRQKFVAPYRYDRQVQVA"
+ misc_feature 3207343..3208542
+ /locus_tag="SARI_03312"
+ /note="integrase; Provisional; Region: PRK09692"
+ /db_xref="CDD:170049"
+ misc_feature 3207418..3208530
+ /locus_tag="SARI_03312"
+ /note="Bacteriophage P4 integrase. P4-like integrases are
+ found in temperate bacteriophages, integrative plasmids,
+ pathogenicity and symbiosis islands, and other mobile
+ genetic elements. They share the same fold in their
+ catalytic domain and the overall...; Region: INT_P4;
+ cd00801"
+ /db_xref="CDD:238416"
+ misc_feature order(3208051..3208053,3208168..3208170,3208360..3208362,
+ 3208369..3208371,3208441..3208443,3208471..3208473)
+ /locus_tag="SARI_03312"
+ /note="active site"
+ /db_xref="CDD:238416"
+ misc_feature order(3208051..3208053,3208168..3208170,3208360..3208362,
+ 3208369..3208371,3208441..3208443,3208471..3208473)
+ /locus_tag="SARI_03312"
+ /note="Int/Topo IB signature motif; other site"
+ /db_xref="CDD:238416"
+ gene complement(3208632..3208772)
+ /locus_tag="SARI_03313"
+ CDS complement(3208632..3208772)
+ /locus_tag="SARI_03313"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572287.1"
+ /db_xref="GI:161505175"
+ /translation="MKSKRPKGKGALRVTAPDRKGQRAERAGTGAAKWISPLMQIKKQ
+ IP"
+ gene complement(3208793..3209152)
+ /locus_tag="SARI_03314"
+ CDS complement(3208793..3209152)
+ /locus_tag="SARI_03314"
+ /inference="similar to AA sequence:REFSEQ:YP_407679.1"
+ /note="'COG: COG0582 Integrase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572288.1"
+ /db_xref="GI:161505176"
+ /translation="MFGTKGHRPRETIIQDTGAVKKALDNALAVAEQRNGRLIDLPSL
+ QQAMNYWRKEIAQAGLTGIYTPHSLRYAWTQDALRHYLAQGFSDREALALTSMDLGHG
+ DGRGWYVVQVYGRREEA"
+ misc_feature complement(3208811..>3209152)
+ /locus_tag="SARI_03314"
+ /note="Integrase; Region: Integrase_1; pfam12835"
+ /db_xref="CDD:221800"
+ gene complement(3209121..3209705)
+ /locus_tag="SARI_03315"
+ CDS complement(3209121..3209705)
+ /locus_tag="SARI_03315"
+ /inference="protein motif:superfamily:IPR010998"
+ /inference="similar to AA sequence:INSD:EAY45570.1"
+ /note="'COG: COG0582 Integrase;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572289.1"
+ /db_xref="GI:161505177"
+ /db_xref="InterPro:IPR010998"
+ /translation="MLFIERQGGAMGKLGSEMKALAKKAGGSYQTVDNRIHIVQRFSK
+ HLRALNIQIQRVAQIKVRHIECCIQARLAQQIGKRTLQNERAALRSVLQQAGRQQVAE
+ HERMTNKSLGLSGASRNGTNRAITPEYYCKVLEAARDKDAGAGGDAGAGKADGAAFAG
+ GGTVLSVIKNVEAGAGTRRNPTDCSVWHQRPSSA"
+ misc_feature complement(3209403..3209675)
+ /locus_tag="SARI_03315"
+ /note="Phage integrase, N-terminal; Region: Integrase_l_N;
+ pfam12834"
+ /db_xref="CDD:193309"
+ misc_feature complement(<3209301..3209372)
+ /locus_tag="SARI_03315"
+ /note="Integrase; Region: Integrase_1; pfam12835"
+ /db_xref="CDD:221800"
+ gene 3210115..3210258
+ /locus_tag="SARI_03316"
+ CDS 3210115..3210258
+ /locus_tag="SARI_03316"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572290.1"
+ /db_xref="GI:161505178"
+ /translation="MLVWQQVQDLPESFRRRAALTRYQAQIKSADNQQVQMSRKIVRL
+ PVR"
+ gene complement(3210611..3210832)
+ /locus_tag="SARI_03317"
+ CDS complement(3210611..3210832)
+ /locus_tag="SARI_03317"
+ /inference="protein motif:superfamily:IPR010982"
+ /inference="similar to AA sequence:REFSEQ:NP_458752.1"
+ /note="'COG: COG3423 Predicted transcriptional regulator;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572291.1"
+ /db_xref="GI:161505179"
+ /db_xref="InterPro:IPR010982"
+ /translation="MSMMQPDWHPADIIAGLKKRGTSLAAISRRSGLASSTLANALNR
+ RWPKGERLIADALGVAPEKIWPSRYLRPR"
+ misc_feature complement(<3210626..3210814)
+ /locus_tag="SARI_03317"
+ /note="Winged helix-turn-helix DNA-binding; Region:
+ HTH_35; pfam13693"
+ /db_xref="CDD:205869"
+ gene complement(3210829..3211290)
+ /locus_tag="SARI_03318"
+ CDS complement(3210829..3211290)
+ /locus_tag="SARI_03318"
+ /inference="similar to AA sequence:INSD:ABB65775.1"
+ /note="'COG: NOG27449 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572292.1"
+ /db_xref="GI:161505180"
+ /translation="MATIPAQIHPLLSVPFNATTDFTVLATHCENFAETLMESDDPAL
+ RLALCGRLAACLSLLRPTLNDPIPPHLIESLTVDFLPATHPRFEPGSELLCDYSLTLA
+ QLLTGRALLPKMERTLTGLLCELVWYFAAELNAPRWLRTADGVKFIDEVVA"
+ gene complement(3211343..3211477)
+ /locus_tag="SARI_03319"
+ CDS complement(3211343..3211477)
+ /locus_tag="SARI_03319"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572293.1"
+ /db_xref="GI:161505181"
+ /translation="MARLASFLCRAHGYTSMAGRAGASQDAPVSSKAGKANPVRFRHP
+ "
+ misc_feature complement(<3211355..>3211453)
+ /locus_tag="SARI_03319"
+ /note="Ash protein family; Region: Phage_ASH; pfam10554"
+ /db_xref="CDD:151096"
+ gene complement(3211587..3215780)
+ /locus_tag="SARI_03320"
+ CDS complement(3211587..3215780)
+ /locus_tag="SARI_03320"
+ /inference="similar to AA sequence:REFSEQ:ZP_00513124.1"
+ /note="'COG: NOG14455 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572294.1"
+ /db_xref="GI:161505182"
+ /translation="MSIRWESIRTFNNSQNNAFEELICQLAREEPIINKIDFRRVAAP
+ DGGVEAYCVLDDGTEYGWQAKYFFSMGDAQWKQLKESFETALKTHPNLTKYYICIPLD
+ RQDPRRKDQDWFMDKWNKKVAEWTQYAKGLGRNISIEYWGSSELTHRLSQENNAGRLH
+ FWFSAEEFTTRWFSEQIEESTKNLGKRYTPELNVELDIARNFDAISRNSDFYKVAHKY
+ FHDFLAKLNKFTDRAIHYSGNNTSEQFKRWISEVKDSFVPEGRGLEQFDINLLLSHID
+ NISKYLSDFEHEFIVNSDKKNDDLRYQVNNVWQAISDFSDFIKGPLLKLANSPLMILS
+ GEAGIGKSHLLADIANHRIKSRIPCLLLLGQNFVSEESPWTQILRNILRVDGKENVLL
+ GALNARAEAQGERLLFIIDAINEEKGRYFWPDYIVGMINQFSKYPWLGLVLSIRSSYE
+ KLIVPKDFFDENKITRIAHSGFGSVEYQASKFFFSQYGIEQPGVPILHPEFSNPLFLK
+ IFCEGLYRSGLNKIPKGYSGISNIISFFINSIEVKLSRPSSFNYPENFKLIEKTINEL
+ IEYKLNNDLSFIPYEAAFDIAEKMIGRYSDRRRFLDELISEGILSKNIYWNSKDNYEE
+ GVYLAYERFEDHLTVSFLLDKYSINNNDALDSFFKENGELYKYIKSNYFYQGIIESLS
+ IQLPERFGKELYELVEIEYKKHDGIIRAFISSLIWRKPDNIEEKTLEYINKYIIPFDN
+ GFDAFMQMVYTVSSDPEHIYNADKLHKFLSKHSMAIRDSFWTKYLHNLDYYETSSMQR
+ LIDWAGAEEDKFYLSDDSRLLAAKALSWLLTSTNIKLRDSATKSLANLLKNSIKTITA
+ LIDSFKDVNDPYVLERILAASYGAVLNSVTLDDLDKLSENIVATIFEAKEVYPNVLVR
+ DYARNIIEYALYKKVYQMDNVDIIRPPYRSDFPTTFPTNEEIDAYKYDYNAADFKDYY
+ WGQNTILSSMVTEYGRGICSYGDFGRYTFQSALSGWCDFDPNDLSNYACKLIFEKYGY
+ DVEKHGQFDRYASEGDRSRNKKERIGKKYQWIALYEVLARIADNHQVVEGGSLWSESK
+ NYVWFQGPWELFVRKIDPTTPSYSKEIIRQKSFWNNENPYNDWDSTINDWLKREANLP
+ DPLELISVLSADDKKYLLLDGFFTWDEPLPLGEDEYGYAKKHLWYHIRSYLLKEDELP
+ TLISNLNKDLPLIRNLPESHDQYRVFSREYYWSPAYQYFDDPYYGDKGWQNIYTDWQK
+ QGEPIATICLTSESHHWESDSSGDNELSYLAPCEFMYHGMKLNYSENTGEWLDSDGDV
+ IFLDPSIHNENKSALIVDKDKLEQFLLKNELNIVWVVTGEKNIHSMRPIDLDGDKWLE
+ IYGIYTLKNNNVDGWRIIK"
+ misc_feature complement(3214548..3214802)
+ /locus_tag="SARI_03320"
+ /note="AAA ATPase domain; Region: AAA_16; pfam13191"
+ /db_xref="CDD:221970"
+ gene complement(3215877..3216395)
+ /locus_tag="SARI_03321"
+ CDS complement(3215877..3216395)
+ /locus_tag="SARI_03321"
+ /inference="similar to AA sequence:INSD:EDK51637.1"
+ /note="'KEGG: pfa:PF11_0053 0.0098 PfSNF2L K01509;
+ COG: COG2865 Predicted transcriptional regulator
+ containing an HTH domain and an uncharacterized domain
+ shared with the mammalian protein Schlafen;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572295.1"
+ /db_xref="GI:161505183"
+ /translation="MTPDEVFSLGAVVSSTHNEGNSAYNEQRSTHNEGNSTYNEKRST
+ HNEENSTYNAGDDQPASRDEYGRLLNRFIDRPYIDDVDNLTEAFRDSLFTLAAVPRER
+ LRLGDKELMKSVILNVCQGQYISVAALGQILSRNPNALRQQYLKPLVEQGELKLAFPQ
+ YKNDPKQGYSAV"
+ gene complement(3216382..3216624)
+ /locus_tag="SARI_03322"
+ CDS complement(3216382..3216624)
+ /locus_tag="SARI_03322"
+ /inference="similar to AA sequence:REFSEQ:ZP_01780430.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572296.1"
+ /db_xref="GI:161505184"
+ /translation="MHQRFGETFDQLDDFEQVIVATAAIEGWVNHERACQLTTRHSRE
+ VTLTLPRLESKGFLVAGGGAEKQILHLARRIGHDAG"
+ gene complement(3216653..3217774)
+ /locus_tag="SARI_03323"
+ CDS complement(3216653..3217774)
+ /locus_tag="SARI_03323"
+ /inference="protein motif:HMMPfam:IPR007421"
+ /inference="similar to AA sequence:REFSEQ:ZP_01780430.1"
+ /note="'KEGG: cgl:NCgl0024 1.8e-12 cgl0025; predicted
+ transcriptional regulator K01529;
+ COG: COG2865 Predicted transcriptional regulator
+ containing an HTH domain and an uncharacterized domain
+ shared with the mammalian protein Schlafen;
+ Psort location: cytoskeletal, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572297.1"
+ /db_xref="GI:161505185"
+ /db_xref="InterPro:IPR007421"
+ /translation="MANGRGGWVVLGVKEQAGKFIPVGIVDPEKIKADLFNQLNDRDR
+ VSANVLRSENDVQQVSLQGTDVLAIHIPQAMRKQKPVHLKKSPFGNTYQRLHEGDRVC
+ DDMTVKRMLAEQIHDSRDNEVLSEHYTFQDDIDLDSLKVYRNLLSANNPQHPYLACEP
+ FELFKMVGGWRKDRETGKKGITLAGVLMFGKWDAIIAAAPNYMVDYQERPEAKTELRW
+ VDRVCPDGTWSGNLFDFYRKVYQKLVADLKVPFTLEEGQRRTDTPVHIALREALVNTL
+ VHADFTDRVSILIVKRPDMFGFRNPGLMRLPLEDVIAGGVSDCRNRLLHQMFLLIGLG
+ EKAGSGMPKIFSGWKSANWRTPNFGKDVSCTDAIRAFYG"
+ misc_feature complement(3217466..>3217774)
+ /locus_tag="SARI_03323"
+ /note="Divergent AAA domain; Region: AAA_4; pfam04326"
+ /db_xref="CDD:218028"
+ misc_feature complement(3216701..3216991)
+ /locus_tag="SARI_03323"
+ /note="ATP-dependent DNA helicase recG C-terminal; Region:
+ HATPase_c_4; pfam13749"
+ /db_xref="CDD:222360"
+ gene complement(3217993..3218325)
+ /locus_tag="SARI_03324"
+ CDS complement(3217993..3218325)
+ /locus_tag="SARI_03324"
+ /inference="protein motif:FPrintScan:IPR000551"
+ /inference="protein motif:HMMPfam:IPR000551"
+ /inference="protein motif:HMMSmart:IPR000551"
+ /inference="protein motif:ScanRegExp:IPR000551"
+ /inference="protein motif:superfamily:IPR009061"
+ /inference="similar to AA sequence:INSD:AAL23144.1"
+ /note="'KEGG: eci:UTI89_C3737 1.2e-09 yhdM;
+ Zn(II)-responsive regulator of ZntA;
+ COG: COG0789 Predicted transcriptional regulators;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572298.1"
+ /db_xref="GI:161505186"
+ /db_xref="InterPro:IPR000551"
+ /db_xref="InterPro:IPR009061"
+ /translation="MQIGKLAALTGVSIRMLRYYESAGLLHPARTDAGYRSFTSEDVD
+ IVRRILILNGAGFTLPVVRRLLNCVHSGMEPCEELKTKVREQLTQIDCQFEALSESRK
+ LLNKLLMI"
+ misc_feature complement(3217999..3218325)
+ /locus_tag="SARI_03324"
+ /note="Helix-Turn-Helix DNA binding domain of putative
+ transcription regulators from the MerR superfamily;
+ Region: HTH_MerR-like_sg3; cd01282"
+ /db_xref="CDD:133388"
+ misc_feature complement(3218125..3218325)
+ /locus_tag="SARI_03324"
+ /note="MerR HTH family regulatory protein; Region: MerR_1;
+ pfam13411"
+ /db_xref="CDD:205589"
+ misc_feature complement(order(3218218..3218226,3218272..3218274,
+ 3218314..3218322))
+ /locus_tag="SARI_03324"
+ /note="DNA binding residues [nucleotide binding]"
+ /db_xref="CDD:133388"
+ misc_feature complement(order(3218023..3218028,3218035..3218037,
+ 3218047..3218049,3218065..3218067,3218077..3218079,
+ 3218131..3218133,3218158..3218163,3218173..3218175,
+ 3218182..3218184))
+ /locus_tag="SARI_03324"
+ /note="putative dimer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:133388"
+ gene 3218397..3218759
+ /locus_tag="SARI_03325"
+ CDS 3218397..3218759
+ /locus_tag="SARI_03325"
+ /inference="similar to AA sequence:REFSEQ:NP_950158.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572299.1"
+ /db_xref="GI:161505187"
+ /translation="MLKLIMCVKRRTHLTREEFDHYWRNHHTLLVIKHAECLGIRKYV
+ QTTPIANNAAQSALQQTRNSAPVDFDGCAELWWDLESHLVARKTTEGLSALRELMMMR
+ VNSWIWNSRNSGTARSCV"
+ misc_feature 3218436..>3218651
+ /locus_tag="SARI_03325"
+ /note="EthD domain; Region: EthD; pfam07110"
+ /db_xref="CDD:219298"
+ gene complement(3219311..3219622)
+ /locus_tag="SARI_03326"
+ CDS complement(3219311..3219622)
+ /locus_tag="SARI_03326"
+ /inference="protein motif:HMMPfam:IPR002514"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:INSD:AAG53987.1"
+ /note="'COG: COG2963 Transposase and inactivated
+ derivatives;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572300.1"
+ /db_xref="GI:161505188"
+ /db_xref="InterPro:IPR002514"
+ /db_xref="InterPro:IPR009057"
+ /translation="MRGAMSGKHYPEEFKIGAVKQVVDRGHSVSSVATRLDITTHSLY
+ AWIKKYGPDSSINKEQSDAQAGLRRLQKELKRVTDERDILKKPRRTSQSCPTEVRLYT
+ R"
+ misc_feature complement(<3219365..3219610)
+ /locus_tag="SARI_03326"
+ /note="Transposase and inactivated derivatives [DNA
+ replication, recombination, and repair]; Region: COG2963"
+ /db_xref="CDD:225511"
+ misc_feature complement(3219395..3219601)
+ /locus_tag="SARI_03326"
+ /note="Transposase; Region: HTH_Tnp_1; pfam01527"
+ /db_xref="CDD:201841"
+ gene 3220086..3220961
+ /locus_tag="SARI_03327"
+ CDS 3220086..3220961
+ /locus_tag="SARI_03327"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR000005"
+ /inference="protein motif:HMMSmart:IPR000005"
+ /inference="protein motif:ScanRegExp:IPR000005"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:REFSEQ:NP_458611.1"
+ /note="'KEGG: bli:BL05281 4.7e-07 adaA;
+ methylphosphotriester-DNA alkyltransferase and
+ transcriptional regulator (AraC/XylS family) K00567;
+ COG: COG2207 AraC-type DNA-binding domain-containing
+ proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572301.1"
+ /db_xref="GI:161505189"
+ /db_xref="InterPro:IPR000005"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /translation="MLKVFNPSPVPVGNVEFLQSAQSWQRKTLSLQGLNLVQSVLIKL
+ TTGKITITTSSGEHITIIGPMLIFLAKEQTIHIIQEETNEKLNYNLIELDSASIKNTY
+ NFFLYEHAEFHAPLTKPTTKHLLAPIETGVARVFDLLYTSNKNQKLPQDKKQYLIRFL
+ LSEFISEPEAFSLFRELSQNSVAENIYNIIISDISRKWTLKDISDSLYMSCSTLKRKL
+ KQENTSFSEVYLNARMNKAAKLLRNSEYNVTRVAYMCGYDSASYFTCVFKKHFKTTPS
+ EFLSFLSSSQYQFVN"
+ misc_feature 3220086..3220958
+ /locus_tag="SARI_03327"
+ /note="AraC family transcriptional regulator; Provisional;
+ Region: PRK15186"
+ /db_xref="CDD:185108"
+ misc_feature 3220815..3220910
+ /locus_tag="SARI_03327"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ gene 3220973..3221245
+ /locus_tag="SARI_03328"
+ CDS 3220973..3221245
+ /locus_tag="SARI_03328"
+ /inference="protein motif:BlastProDom:IPR000792"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000792"
+ /inference="protein motif:HMMSmart:IPR000792"
+ /inference="similar to AA sequence:REFSEQ:YP_219177.1"
+ /note="'KEGG: pha:PSHAa1916 0.0088 uvrY, sirA; response
+ regulator K07689;
+ COG: NOG31371 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572302.1"
+ /db_xref="GI:161505190"
+ /db_xref="InterPro:IPR000792"
+ /db_xref="InterPro:IPR011991"
+ /translation="MQYKNKLKHINIKNGILLLAEKFNLTLSEKKVIYYIAAGLSVKS
+ CSNLLDRNIKTISTQKRSAYRKMAITTDVELIHLMLTEFSISIEIT"
+ misc_feature <3221045..3221233
+ /locus_tag="SARI_03328"
+ /note="Response regulator containing a CheY-like receiver
+ domain and an HTH DNA-binding domain [Signal transduction
+ mechanisms / Transcription]; Region: CitB; COG2197"
+ /db_xref="CDD:225107"
+ misc_feature 3221045..3221206
+ /locus_tag="SARI_03328"
+ /note="C-terminal DNA-binding domain of LuxR-like
+ proteins. This domain contains a helix-turn-helix motif
+ and binds DNA. Proteins belonging to this group are
+ response regulators; some act as transcriptional
+ activators, others as transcriptional repressors. Many...;
+ Region: LuxR_C_like; cd06170"
+ /db_xref="CDD:99777"
+ misc_feature order(3221048..3221056,3221093..3221101,3221123..3221128,
+ 3221132..3221137,3221141..3221155,3221186..3221188)
+ /locus_tag="SARI_03328"
+ /note="DNA binding residues [nucleotide binding]"
+ /db_xref="CDD:99777"
+ misc_feature order(3221081..3221083,3221087..3221089,3221093..3221095,
+ 3221186..3221194,3221201..3221203)
+ /locus_tag="SARI_03328"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99777"
+ gene complement(3221562..3223532)
+ /locus_tag="SARI_03329"
+ CDS complement(3221562..3223532)
+ /locus_tag="SARI_03329"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="similar to AA sequence:REFSEQ:YP_153136.1"
+ /note="'KEGG: ava:Ava_1188 8.3e-19 cyclic
+ nucleotide-regulated ABC bacteriocin/lantibiotic exporters
+ K06147;
+ COG: COG2274 ABC-type bacteriocin/lantibiotic exporters,
+ contain an N-terminal double-glycine peptidase domain;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572303.1"
+ /db_xref="GI:161505191"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MNNNFFEIIRKYCLVEEIDFVFKNKSKEMCDVLQNFNDYINNNF
+ FDYKITTDNSYDYANLPKTFIVEWTESYFLILQKEKNKLINLTSTDIVTQDELLSKRV
+ FFLSKELKNINDVDVFDAIKKMTPGASYFSLGLVFFALMTPLYSNLFNTRLIYSDSYH
+ SVFFVTGIFIIFVIFELILKSIIYDKTSSQIRSNNIKCNAFFLYALKVSNCRNAAVKI
+ RTIESSVASLWESYPLISVDFSLTFLFIVCLFVMMGVYAFPLFIYYIVLTFLCVYIRF
+ SAYKKTLQTNTASYEKMSTLISLEAKRKELKFLRSTFFEKLLMDKTNRDEYTKMEMNI
+ ENHHWAEMIKANSFVSMIVMFISSYFAVVNGSLTTASIIAIMIINSRLSGALVGGVNK
+ LYLSRLHSFHIMNSLSELLKDKDTFVSHSGIYISRIQQLSVEKLSISFAERKLIEPLS
+ FTAVPGDFIGIVGASGAGKSSLIKALSNSINCYTGSVKLNNVDITHISEEYIQSCIAY
+ HSTNSSFIKGSLRENFMIYGVVDDSDIIEILTLCCRNLILSKENVDEKFVDELNLSNG
+ EKQKILLCLALFKKPEMVLLDESTSYLSTADALDFLERIKHLYSDSIVIFATHDISLQ
+ RLFTRKIELSHEHLRTVSCNTTISIPKMKLNG"
+ misc_feature complement(3221628..3222221)
+ /locus_tag="SARI_03329"
+ /note="ATP-binding cassette domain of multidrug resistance
+ protein-like transporters; Region: ABCC_MRP_Like; cd03228"
+ /db_xref="CDD:213195"
+ misc_feature complement(3221610..3222212)
+ /locus_tag="SARI_03329"
+ /note="ABC-type uncharacterized transport system, ATPase
+ component [General function prediction only]; Region:
+ COG4619"
+ /db_xref="CDD:226970"
+ misc_feature complement(3222123..3222146)
+ /locus_tag="SARI_03329"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213195"
+ misc_feature complement(order(3221676..3221678,3221769..3221774,
+ 3222000..3222002,3222120..3222128,3222132..3222137))
+ /locus_tag="SARI_03329"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213195"
+ misc_feature complement(3222000..3222011)
+ /locus_tag="SARI_03329"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213195"
+ misc_feature complement(order(3221817..3221837,3221883..3221891))
+ /locus_tag="SARI_03329"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213195"
+ misc_feature complement(3221769..3221786)
+ /locus_tag="SARI_03329"
+ /note="Walker B; other site"
+ /db_xref="CDD:213195"
+ misc_feature complement(3221751..3221762)
+ /locus_tag="SARI_03329"
+ /note="D-loop; other site"
+ /db_xref="CDD:213195"
+ misc_feature complement(3221670..3221690)
+ /locus_tag="SARI_03329"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213195"
+ gene complement(3223529..3223888)
+ /locus_tag="SARI_03330"
+ CDS complement(3223529..3223888)
+ /locus_tag="SARI_03330"
+ /note="'Psort location: extracellular, including cell
+ wall, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572304.1"
+ /db_xref="GI:161505192"
+ /translation="MILLLSVLLANLLSVAITKDNKLDSANLAYEADNKDQIDAAMGK
+ GFSLSVKDLLPLRSSDVAVRLYCTYGNNLSLEVAKKYTTYNYIVAKSALGDKKIIVEQ
+ PIYENKKNTCIVEEVKK"
+ gene complement(3223939..3225174)
+ /locus_tag="SARI_03331"
+ CDS complement(3223939..3225174)
+ /locus_tag="SARI_03331"
+ /inference="protein motif:superfamily:IPR011053"
+ /inference="similar to AA sequence:INSD:AAX68045.1"
+ /note="'COG: COG0845 Membrane-fusion protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572305.1"
+ /db_xref="GI:161505193"
+ /db_xref="InterPro:IPR011053"
+ /translation="MNNNLLSRKMLAVFMTVAALIVYICVAKIDIVSPGTGVITGASD
+ KLVIVSPDSGFINKFDLRTGSKVNIGDILFSYTNLDVFHQEKTLNELVLFADRRIVSL
+ EEDQRLLKILLAGEISEESEFSTENKDFFSQELSAYKLLNEYFSLRNEEKNLKLREEK
+ MIEEKNDLHDRLLLLKRKGNLLKSARAPEIEIINNKTEISQIISQITTGEISLLSLQN
+ DIKLANNRFRSSVLEQLNNNAEQLEQLRRERLENRGQLELLRNKIKANSVLSPTNGII
+ LSIERSFEKGSYVENSQPVMTIKKSNESKVIDARILAKYRPFIFMGTTAKITVNSPGY
+ KKTLSGEITRISADSFSDDEKNGAERYYKVEIKPDDKIIVPPELEGVQVNVYALSKKV
+ TLLNYITALVGDNIVFNVW"
+ misc_feature complement(3224062..3224373)
+ /locus_tag="SARI_03331"
+ /note="HlyD family secretion protein; Region: HlyD_3;
+ pfam13437"
+ /db_xref="CDD:222128"
+ gene complement(3225176..3226393)
+ /locus_tag="SARI_03332"
+ CDS complement(3225176..3226393)
+ /locus_tag="SARI_03332"
+ /note="'KEGG: pfa:MAL13P1.278 0.00037 Ser/Thr protein
+ kinase K00870;
+ COG: COG1196 Chromosome segregation ATPases;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572306.1"
+ /db_xref="GI:161505194"
+ /translation="MKTNFIIMGFLFFSPLALAGQDTLHYADFINEMYKESDMIKAKA
+ LELESELLRAKQTDLYFMPKISAESKYKSDTSRGDITDSKITASSLIFSTTIVERFKE
+ KNSRIHSAELSLLKEKETLYKSLIENLIGIKYYDDLEVKASKLEQTAIDLYRQIEGRY
+ LSGIAKASDVEQARLLIQKIKTESESINKEIELLKSNIELATGIAFPERGVNLPDSII
+ NKINGYNINEKEIYNNIDYKLLNEQANAAKFNAWQQDSLVQVSLVAEERYNNSQRIDK
+ DSWGGIQVSVNLFDYDKKIASQTGIKSYQVLKTRMDFKYKELLAKMKSLQLTINSNQK
+ ELKGLEEQSRTTEVILANQKREYNISQSSYYEMLNTQYDYFALERKMVEMKISDAINK
+ ISLLQVSGELLSL"
+ misc_feature complement(3225182..>3226180)
+ /locus_tag="SARI_03332"
+ /note="Outer membrane protein [Cell envelope biogenesis,
+ outer membrane / Intracellular trafficking and secretion];
+ Region: TolC; COG1538"
+ /db_xref="CDD:224455"
+ gene complement(3226383..3227390)
+ /locus_tag="SARI_03333"
+ CDS complement(3226383..3227390)
+ /locus_tag="SARI_03333"
+ /note="'COG: NOG07819 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572307.1"
+ /db_xref="GI:161505195"
+ /translation="MYFLGLIFYILTAVCYLLFPAIKNMVNQAAFLAPQITYACGVLF
+ ILPLLLFLTHWVFRLKARKYYTLLATQTKLAASVAVSLGLIGTFMGLTDMVSAISGSL
+ GGEGDLAAKMGAMISSISSALTAMSFAFLTSILGVTVSVLLLVSLNFWEFYYETENNA
+ EKMSGNIPSENELNALLNRITLLEEINTNIANKLIYIPENTELAELLVVNNNAMAENL
+ IQINTTIKNIEKITKAFTEISDSALVSINTSLMDVNQSNMVANEKIVAGNEHLMDLNV
+ GVNALLALMKKNSEFNEEMENNKSEQLKVIIDRQESYFHEQYKFKNKMRQVVEVLTNE
+ N"
+ gene complement(3227395..3227841)
+ /locus_tag="SARI_03334"
+ CDS complement(3227395..3227841)
+ /locus_tag="SARI_03334"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572308.1"
+ /db_xref="GI:161505196"
+ /translation="MSAEENNSDEELAPMVDGLSGALCILILVSTVFILSSTDSIVTS
+ DGGALKFRDSFTNLSKNTIYYSGAVSLSSSDLYQTRKHLVDSGKKKITLYGAVSKSVE
+ NHKAKNTFNLLKIYTDLKLPSDIEVEFKEGDSSACEKSLSCIYWSN"
+ gene 3228070..3237654
+ /locus_tag="SARI_03335"
+ CDS 3228070..3237654
+ /locus_tag="SARI_03335"
+ /inference="protein motif:Gene3D:IPR013783"
+ /inference="protein motif:superfamily:IPR002126"
+ /inference="protein motif:superfamily:IPR008957"
+ /inference="similar to AA sequence:REFSEQ:ZP_01659279.1"
+ /note="'KEGG: chu:CHU_2225 1.3e-31 CHU large protein;
+ gliding motility-related protein; possible adhesin
+ AidA-related K01238;
+ COG: COG5295 Autotransporter adhesin;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572309.1"
+ /db_xref="GI:161505197"
+ /db_xref="InterPro:IPR002126"
+ /db_xref="InterPro:IPR008957"
+ /db_xref="InterPro:IPR013783"
+ /translation="MTMKENTSSTDNTNLKPETISDIKSYKVSGFDLIVTTSNGNTTT
+ LKDGLTNLVLGNVELRDTTGKTINQDHIISSIKTYQLGLDTVYLADKLVSDESTPETT
+ KDESEQQVKDTFADINKALEESLQQKIKEYEELLKQQTTDLKENIQLEKNEQLSQKKE
+ IIDKKAKQELSKNLKPAEEEVVNNVPAPPATPPVPPASSSSSSSEQAEKALEPLPTPE
+ VPLFITGQLDAKADSGKTGDGITNITTPTFTGNATPGATASLIIDKTHYPLTVDKDGK
+ WTLQLSSPLPDGQYEINFTITDSGGKTVTSTTTVVIDSEVSGLTASLDPASDSGVVGD
+ SITNNPKPVLQGTSEPGSIINVIIGGMALTTVTNADGQWYLSPGSNLPDGVYHYQVTA
+ TDEAGNTATVNNTVTIDTTAPDVTFALSAATDSGQQDDFLTNIPQPVLTGKTEPGAYV
+ ILTLNGNVYEATADRQGQWELEITPALNDGSYEFTVETTDIAGNTATQTGKVTIDTQP
+ PTITATLSTESDTGSSNTDGVTNNPHPLLTGNTKPLAIITVTLAGKSFSVQADENGLW
+ TWKVPEDLVLDDGEHVYTLSVTDAAGNSASSPLEGKFTLDTTPPSAPTVYLDADSDSG
+ DSGDSITNITTPTLSGKSEPHTEVFVTIDDHIYSLQADENGDWQLTLDTPLADGRYDV
+ TVAAKDNAGNMSETTGNMTLVIDTSIPEITVSLHESDDSGVSNSDGITHINQPTFHGT
+ ATPNTSVVLTINNVEYHAAADADGNWSLTLPDALADKTYEYTVKVENAVGTSATASGS
+ ITVDTTPPSSEASLDEASDSGRNNQDNITNVIRPILTGTTEPEADIEIMFNGVSHTLK
+ AGADGTWHYAIPDDLPDATYTYTVTTTDKAGNTSSSEHQFSVDTVSQLSGGLDLSSIM
+ EGTAGNNTTQLVRPMLSGMAEPGSLVTVAIKNMTYTASVDDTGRWKLTLPKDAEPGLN
+ EYTVTSEDLAGNTATITGNFNYVPSGVVPPKVTAQLDADSDSGIKGDNITNDNTPKIV
+ GQATPDTVIVLTIAGQSYTTTAAADGSWSIDVTHALNEGFSEYTVTATDTGTGLSAIT
+ TNNIFIDTLNPLSTVGLTSDSDTGIKGDMITKTTRPVFTGKTEPGATITLHIDGQIRH
+ TTADHNGDWTLQGPTWGLPPNYTAGYTIIVTDKAGNQTTTKGNITTDNKAPTLTGSEL
+ DSSSDTGDKDRYWTNDLTPTLTGKAEAGSKVTIRINDKTYNVTDIASNGTWKFTLPTG
+ LIQDNGNYHTIRFSVTATDAAGNTATTSDAIYICKRKLTITSGLSDETDSDTKGDNLT
+ SVTKPTLEGTIAGGHANDNLRGTITIGGKTYPLTITAGGTKWSFTVPDSAPLNSGTHD
+ YTLTFKDKFGTETTHSATVTISTLVGFLSPEDDTGSVGDNQTQNTSPSLSGKASIGST
+ LRIEFNAQEYTIPVNADGTWTFTLPGGPFVEGEYHYKLTEIVGHSVTTFNGSFTIDHT
+ PPEITGGLSASDATPNDPSVSRWSNPTFNGKAEPNREVIVEINGKRYSTTSDDNGNWQ
+ ILLQDVNLLPDTRYDYTITSTDAAGNSGVFHGAISNVVAAPNAQFGGHEDYLVGAAGS
+ TNSIFYKDASPVIVGRGNPGDTITIRKNSGGSGPLTTVVDADGNWKIHLPASEFPANT
+ PQGGYYTWSLTVTNSYGLETTYTVRITRDSVPPRLTGGLDNASDTGVQGDNITHNSTP
+ TFSGSTEAGLKVTITLNGQNYTVTANNAGKWSFTVPETLRDGNYDYSISTVDKAGNLS
+ PTITGTLTVDNSSVALTGGLDTTADPNIANGWSNHNDQTLKGTATPGATVIVTINGMT
+ YTPIVTADGNWTLALPDLSNNSYSYTVTATNTAGTSSTISGQFVIDNTPPTTTVGLSA
+ ATDSGVLGDFITNNETPVFTGKTKPGATITLTIGGQTHTVVADNQGNWEVAVNTPLNT
+ GTHNYTVSITDLAQNVSTPVNGELNIQSGNMAGLVTGGLDIDSNTGDTGDTITSNTKP
+ NFSGTAPTGVTVIVTIGGKTYKTVADQHGNWKLAITSPLRDGDHDYSISLEDVAGNQS
+ PPIMGKITIDSVSHLQINGLSDDTDSGAKADNITNNTMPTLMGTAEANATITLTIDGN
+ RYTTTANVDGTWTIPLTHALTDGDYHYTVTATDSAGNTTSSTATITIDTTAPDYLTGG
+ LDIASETGAVGSHLTNQATPTFSGATESGATVTLMINGKTYTAIAGDNGKWSITLPEG
+ GKLADGSYPYTITVTDASGNASGVQVNGNVTVQNTPPSANAGLHAGSDSGVTGDQITN
+ NTQPTLSGKTAPGASIVVIFAGATYPVSVDASGNWVFRLPDTLTDGSYSYQVLATDNA
+ GNETRYDGDFTVDTSPPDAPVAALAESADSGVTGDGITHIKNPTFTGTAEANATVILT
+ INGKDYTAKAGSDGAWTITLPVGHSLPDGTYQYTVLAQDTAGNISAPTAGSVAINTTA
+ PTIPGGGLDATTGTDNITNVTTPTFSGKADPNSIVILRINGKAYEIQVGNDGAWKFTL
+ PADDTLTDGTYAYTLQGKNAIGNTSAEQSGSVIIDTMPPTAPTAGLAPGYDTGVAGDN
+ ITRITTPKFTGKAEPGTTITLSINGKMYECPTATDGTWAFTLPSADALATGNYAYTVL
+ ATDAAGNVSATTNGNITIDLALPAIPYGGLATESDTGTAGDNITNADLPTFSGTAEPN
+ ITVILTLNGKRYNVPVNNDGTWRFTLPAGDKLNDGSYDFTLQGQNTAGTTSDAFKGSI
+ TIDTTPPDAAVGKLTADTDTGIAGDNITSVSTPTFTGTTDPGATIIFTINSKTYEFQA
+ DSSGVWRFTLPTEDALPDDTYIYTVQAKDVAGNASTPTSGSLTIDSTSPAPTVGALTE
+ DSDTGDKGDNVTRDKTPTFTGTTEPGATIILTLNKETYTFQAGKDGRWRFTLPAANAL
+ DDGIYQYTVQAKDIAGNTSSLSTGWLTIDATPPVLSLEDNSDTGTADDDITSINTPTF
+ TGTSEANATITLNIDSKVFTTAADSAGKWTITLDQPLNDGTYEYTLTAKDAAGNENTL
+ NERLTIDTQPPAEPTLGSTSDGVDSAVTLQGTVEANQDIQVKVTVNGTEYPASVDNDS
+ GDWHVSVPQSIILSGENQYTLTATDPAGNSAVASGTFTGTSPTENPVNKSSGADEMIL
+ LSEATLHSVSVEEEYYAL"
+ misc_feature 3229435..3229596
+ /locus_tag="SARI_03335"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature 3229504..3230379
+ /locus_tag="SARI_03335"
+ /note="Putative flagellar system-associated repeat;
+ Region: SWM_repeat; pfam13753"
+ /db_xref="CDD:222362"
+ misc_feature 3229726..3229899
+ /locus_tag="SARI_03335"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature 3230038..3230196
+ /locus_tag="SARI_03335"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature 3230329..3230481
+ /locus_tag="SARI_03335"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature 3231202..3231366
+ /locus_tag="SARI_03335"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature 3233077..3233925
+ /locus_tag="SARI_03335"
+ /note="Putative flagellar system-associated repeat;
+ Region: SWM_repeat; pfam13753"
+ /db_xref="CDD:222362"
+ misc_feature 3233299..3233457
+ /locus_tag="SARI_03335"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature 3233587..3233745
+ /locus_tag="SARI_03335"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature 3233644..3234516
+ /locus_tag="SARI_03335"
+ /note="Putative flagellar system-associated repeat;
+ Region: SWM_repeat; pfam13753"
+ /db_xref="CDD:222362"
+ misc_feature 3234169..3234321
+ /locus_tag="SARI_03335"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature 3234751..>3234879
+ /locus_tag="SARI_03335"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature 3235051..3235212
+ /locus_tag="SARI_03335"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature 3235120..3236013
+ /locus_tag="SARI_03335"
+ /note="Putative flagellar system-associated repeat;
+ Region: SWM_repeat; pfam13753"
+ /db_xref="CDD:222362"
+ misc_feature 3235342..3235512
+ /locus_tag="SARI_03335"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature 3235630..3235791
+ /locus_tag="SARI_03335"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature 3235930..3236100
+ /locus_tag="SARI_03335"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature 3236230..3236400
+ /locus_tag="SARI_03335"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature 3236533..3236700
+ /locus_tag="SARI_03335"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature 3236599..3237474
+ /locus_tag="SARI_03335"
+ /note="Putative flagellar system-associated repeat;
+ Region: SWM_repeat; pfam13753"
+ /db_xref="CDD:222362"
+ misc_feature 3236836..3237000
+ /locus_tag="SARI_03335"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature 3237124..3237282
+ /locus_tag="SARI_03335"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ gene complement(3237903..3238856)
+ /locus_tag="SARI_03336"
+ CDS complement(3237903..3238856)
+ /locus_tag="SARI_03336"
+ /inference="protein motif:HMMPfam:IPR009722"
+ /inference="similar to AA sequence:REFSEQ:YP_153182.1"
+ /note="'COG: COG3204 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572310.1"
+ /db_xref="GI:161505198"
+ /db_xref="InterPro:IPR009722"
+ /translation="MRYGISRDVICYGFFMRFLKRCIVVVLFGVILFMVRDDIRYVYQ
+ LILKYGDKPSALVLSGYKAVIQEKTVAGIKSNLSGLTYSAEDRMLFAVINNPPELVWL
+ TTEGQLVGRMPLQGIHDPESIAWSGGNQFMIGSEKDGAVYKTQVDTLRGAMQIISMVK
+ LEGYNKAKNKGLEGTAWDAKNERLYAAKERKPIVIKEVDMRKNGVTSVLPSTVTASIS
+ DVSGLEYYAPTDSLLVLSDESKMILEVSSEWRVRDRLFLTAEWSGLREDIPQPEGIAM
+ DDDDNLYIVSEPNLFYKFSRDTQHDQDLFLLSHHDKTEQGY"
+ misc_feature complement(3237954..3238856)
+ /locus_tag="SARI_03336"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG3204"
+ /db_xref="CDD:225745"
+ misc_feature complement(3237972..3238676)
+ /locus_tag="SARI_03336"
+ /note="SdiA-regulated; Region: SdiA-regulated; cd09971"
+ /db_xref="CDD:197380"
+ misc_feature complement(order(3237996..3237998,3238041..3238043,
+ 3238194..3238196,3238338..3238340,3238494..3238496,
+ 3238500..3238502,3238575..3238577,3238623..3238625))
+ /locus_tag="SARI_03336"
+ /note="putative active site [active]"
+ /db_xref="CDD:197380"
+ gene 3239159..3240559
+ /locus_tag="SARI_03337"
+ CDS 3239159..3240559
+ /locus_tag="SARI_03337"
+ /inference="similar to AA sequence:INSD:AAL23133.1"
+ /note="'COG: NOG24086 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572311.1"
+ /db_xref="GI:161505199"
+ /translation="MKLNIITASLAMLVAASTFPAHAGPQAHVVCGYHHTLGDDAIMM
+ FGKANQAMWHDFFGNTHTDAISTYQTLRAQPDTTCDNKADSSAYWAPSMKLPDGEIVK
+ PAYQKTYYQSTNVAQYPLHPFPAGLELLAGDHHGTDPSSAITFLCANGKGYTNKVGEI
+ CGLRKAGDAVQFNIGITFPNCWDGVNLKPTHSHNNATYADHGKCSAEYPVKIPTVNMN
+ IAWVLPQISSLDTSKVELSMDPVMHGETREERWGSLYTAHADFMNGWTEDGAQFMTDL
+ CMNQGLDCGTTVPYAYSKAEENTWVSSEDDKPHAGVDTLYVQDDWTNGGRTQHPETLT
+ LVKFKIPSLPANMDASLFKYRIRLFGGKTETNGADQIFFYPTNNDWHVSSVSWNNKPA
+ ITYRSDTVLYLNHSHEYRMVDVDKAVRKALAEGKTEISWYIGGDRQGNHYDFTPADSK
+ QSLVLMLTGFKKTPEL"
+ misc_feature 3239276..3239953
+ /locus_tag="SARI_03337"
+ /note="Domain of unknown function (DUF1996); Region:
+ DUF1996; pfam09362"
+ /db_xref="CDD:220204"
+ gene complement(3240657..3241250)
+ /locus_tag="SARI_03338"
+ CDS complement(3240657..3241250)
+ /locus_tag="SARI_03338"
+ /inference="protein motif:HMMPfam:IPR010395"
+ /inference="similar to AA sequence:REFSEQ:NP_463173.1"
+ /note="'KEGG: vfi:VFA0083 1.4e-24 ynfI; anaerobic dimethyl
+ sulfoxide reductase chain YnfI K00397;
+ COG: COG3381 Uncharacterized component of anaerobic
+ dehydrogenases;
+ Psort location: vesicles of secretory system, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572312.1"
+ /db_xref="GI:161505200"
+ /db_xref="InterPro:IPR010395"
+ /translation="MLSRAVLPRILGALFYYSPERPEVKALFDCLPTLPELYPWRDRG
+ HIESLCASWPLPDDDSLTWQFSVLFEGQGEMPVPPWGSVYLEKDNLLMGETTADYRAF
+ LQSQGMVFTDCEREPEDQFGLMLLACSDLLARGDNAAANRLLEAHLLPWGFRYLELLQ
+ RNTVSVFYARLAVVAICYLQDVQQQQELQPATKRLFF"
+ misc_feature complement(3240669..3241250)
+ /locus_tag="SARI_03338"
+ /note="Uncharacterized component of anaerobic
+ dehydrogenases [General function prediction only]; Region:
+ TorD; COG3381"
+ /db_xref="CDD:225916"
+ gene complement(3241326..3242099)
+ /locus_tag="SARI_03339"
+ CDS complement(3241326..3242099)
+ /locus_tag="SARI_03339"
+ /inference="protein motif:HMMPfam:IPR007059"
+ /inference="similar to AA sequence:REFSEQ:NP_463172.1"
+ /note="'KEGG: sec:SC4185 2.6e-124 dmsC; putative anaerobic
+ dimethyl sulfoxide reductase, subunit C K00397;
+ COG: COG3302 DMSO reductase anchor subunit;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572313.1"
+ /db_xref="GI:161505201"
+ /db_xref="InterPro:IPR007059"
+ /translation="MHELPLVFFTVFTQIAVGAFILLLIGGAMGLVALRRKAIGLFSV
+ MCLFGIGVIVGLFHVGQPLRALNMLLRVGHSPMSNEIVLSAAFAALGGLGALGLLLNR
+ AAPLCNALVWLAAIVGVVFLYAVPQIYQLPTVATWRSFYTTAMMILTPLIGGGALAAL
+ FGVRRLGLLVSVLAILVSFCLRPGYMATLMSADSALTAAQHSWFTAQSVLLAAGVVGV
+ VVCARMKSSAAVLAMTATVVIAAELVGRIAFYNLWTLPM"
+ misc_feature complement(3241329..3242099)
+ /locus_tag="SARI_03339"
+ /note="DMSO reductase anchor subunit (DmsC); Region: DmsC;
+ cl17519"
+ /db_xref="CDD:248073"
+ gene complement(3242092..3242718)
+ /locus_tag="SARI_03341"
+ CDS complement(3242092..3242718)
+ /locus_tag="SARI_03341"
+ /inference="protein motif:HMMPfam:IPR001450"
+ /inference="protein motif:ScanRegExp:IPR001450"
+ /inference="similar to AA sequence:REFSEQ:NP_463171.1"
+ /note="'KEGG: spt:SPA4124 2.8e-65 dmsB; anaerobic dimethyl
+ sulfoxide reductase subunit B K00397;
+ COG: COG0437 Fe-S-cluster-containing hydrogenase
+ components 1;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="dimethyl sulfoxide reductase subunit B"
+ /protein_id="YP_001572314.2"
+ /db_xref="GI:448236273"
+ /db_xref="InterPro:IPR001450"
+ /translation="MKQYGFYVDSSRCSGCKTCQVSCKDNKDLEVGPKLRRVYEYGGG
+ SWVKEGESWHHDTFTYYLSIACNHCDEPACVSGCPTGAMHKRKDDGLVLVDGSVCVGC
+ RYCEMRCPYGAPQFDAQANVMRKCDGCLDRLEKNLRPVCVDSCPQRALDFGPIDELRA
+ KYGTENQIAPLPAASFTHPNLIIKPHPKARPTGDTEGAIMNIREVRHA"
+ misc_feature complement(3242230..3242712)
+ /locus_tag="SARI_03341"
+ /note="DMSO reductase, iron-sulfur subunit; Region:
+ DMSO_dmsB; TIGR02951"
+ /db_xref="CDD:131996"
+ gene complement(3242732..3245164)
+ /locus_tag="SARI_03342"
+ CDS complement(3242732..3245164)
+ /locus_tag="SARI_03342"
+ /inference="protein motif:HMMPfam:IPR006656"
+ /inference="protein motif:HMMPfam:IPR006657"
+ /inference="protein motif:HMMPfam:IPR006963"
+ /inference="protein motif:HMMTigr:IPR011888"
+ /inference="protein motif:ScanRegExp:IPR006655"
+ /inference="protein motif:superfamily:IPR009010"
+ /note="'KEGG: stm:STM4305.S 0. putative anaerobic
+ dimethylsulfoxide reductase subunit A K00397;
+ COG: COG0243 Anaerobic dehydrogenases, typically
+ selenocysteine-containing;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572316.1"
+ /db_xref="GI:161505204"
+ /db_xref="InterPro:IPR006655"
+ /db_xref="InterPro:IPR006656"
+ /db_xref="InterPro:IPR006657"
+ /db_xref="InterPro:IPR006963"
+ /db_xref="InterPro:IPR009010"
+ /db_xref="InterPro:IPR011888"
+ /translation="MEIKEWLSTTITRRDAIAATVKVGAAVTLSQAITLPFATTARAQ
+ DATTISKEANGEIVRHSACLVNCGSRCPLKVIVKDNRIVRIEPEDAKDDAVFGEHQIR
+ PCLRGRSSRWRVYSPDRIKYPMKRVGKRGEGKFKRISWDEATAFIAAELKRVSEQYGR
+ EAIYYNYQSGAYYHTQGSPAWKRLLNLTGGYLNYHNTYSTAQIATATPYMHGTYVGSH
+ FTQIAHSDLVVLFGLNLSETRMSGGGQVEELRRALEASKARVIIIDPRYTDSVITEHA
+ EWLPIRPTTDAALVAGIAYTLISEQLIDEAFVNRYCVGYDRSTLPETAAPNASYKDYV
+ LGTGDDGIAKTPEWAADITGIPATRIRQLAREIASARACYICQGWGPQRHANGEQTVR
+ AIQTLPALTGHFGRPGTNNGNWPYGTPYGVPLLPVGKNPIKTSIPCYLWTDAIQHPEK
+ MTATTMGVKGADRLKTGIKLLFNQAGNTLLNQHGETNRTRQILADESLCETIIVIENH
+ MTPSAKYADLLLPETSYLEAEDLVDSSYAAGSHNYIIAIQKTVKPMWEVRSTYDICAD
+ IAGHLGLREQYTEGRTQAQWAEMHYQQIREKRPYLPEWRVAKEMGVIDQRIATEQQSL
+ AFADFRADAEANPLSTPSGKIEIYSQALADLAQTWTLPEGERIPALPEFCPAKESHLN
+ KALTAKYPLQLSGFHTKGHTHSTYSNVLMLHEAVPDEVWINPIDASARQLKSGDRVHV
+ FNDRGVVELPCKVTQRILPGVAAMPQGAWTRLDDNGIDVGGCINTLTSHHPSPLAKGN
+ PQHTNLVEIKRV"
+ misc_feature complement(3242735..3245098)
+ /locus_tag="SARI_03342"
+ /note="anaerobic dimethyl sulfoxide reductase, A subunit,
+ DmsA/YnfE family; Region: dmsA_ynfE; TIGR02166"
+ /db_xref="CDD:233756"
+ misc_feature complement(3243125..3244987)
+ /locus_tag="SARI_03342"
+ /note="This CD (MopB_DmsA-EC) includes the DmsA enzyme of
+ the dmsABC operon encoding the anaerobic dimethylsulfoxide
+ reductase (DMSOR) of Escherichia coli and other related
+ DMSOR-like enzymes. Unlike other DMSOR-like enzymes, this
+ group has a predicted...; Region: MopB_DmsA-EC; cd02770"
+ /db_xref="CDD:239171"
+ misc_feature complement(order(3244853..3244855,3244952..3244954,
+ 3244964..3244966,3244976..3244978))
+ /locus_tag="SARI_03342"
+ /note="putative [Fe4-S4] binding site [ion binding]; other
+ site"
+ /db_xref="CDD:239171"
+ misc_feature complement(order(3243485..3243487,3243581..3243583,
+ 3243635..3243637,3243647..3243652,3243716..3243718,
+ 3243722..3243724,3243734..3243736,3243740..3243742,
+ 3244016..3244018,3244025..3244030,3244307..3244309,
+ 3244313..3244318,3244370..3244378,3244451..3244456,
+ 3244469..3244471,3244568..3244570))
+ /locus_tag="SARI_03342"
+ /note="putative molybdopterin cofactor binding site
+ [chemical binding]; other site"
+ /db_xref="CDD:239171"
+ misc_feature complement(3242738..3243100)
+ /locus_tag="SARI_03342"
+ /note="The MopB_CT_DmsA-EC CD includes the DmsA enzyme of
+ the dmsABC operon encoding the anaerobic dimethylsulfoxide
+ reductase (DMSOR) of Escherichia coli and other related
+ DMSOR-like enzymes. Unlike other DMSOR-like enzymes, this
+ group has a predicted...; Region: MopB_CT_DmsA-EC;
+ cd02794"
+ /db_xref="CDD:239195"
+ misc_feature complement(order(3242762..3242767,3242813..3242815,
+ 3242867..3242869,3243050..3243058,3243062..3243064,
+ 3243071..3243076,3243080..3243082))
+ /locus_tag="SARI_03342"
+ /note="putative molybdopterin cofactor binding site; other
+ site"
+ /db_xref="CDD:239195"
+ gene 3245583..3247172
+ /locus_tag="SARI_03343"
+ CDS 3245583..3247172
+ /locus_tag="SARI_03343"
+ /inference="protein motif:FPrintScan:IPR004358"
+ /inference="protein motif:Gene3D:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003594"
+ /inference="protein motif:HMMPfam:IPR013767"
+ /inference="protein motif:HMMSmart:IPR000014"
+ /inference="protein motif:HMMSmart:IPR003594"
+ /inference="protein motif:HMMTigr:IPR000014"
+ /inference="protein motif:superfamily:IPR003594"
+ /inference="similar to AA sequence:INSD:AAL23128.1"
+ /note="C4-dicarboxylate-sensing histidine kinase; part of
+ two-component regulatory system with DcuR; regulates
+ anaerobic fumarate respiration"
+ /codon_start=1
+ /transl_table=11
+ /product="sensory histidine kinase DcuS"
+ /protein_id="YP_001572317.1"
+ /db_xref="GI:161505205"
+ /db_xref="InterPro:IPR000014"
+ /db_xref="InterPro:IPR003594"
+ /db_xref="InterPro:IPR004358"
+ /db_xref="InterPro:IPR013767"
+ /translation="MKLGTTVILMVSAVLFSVLVVVHLIYFSQISSMTRDALADKALA
+ VARSLADSPVVREGLKKPPVESGIQTLAEAVSQHNGFLFIVVTNMQGIRYSHPEAQRI
+ GQPFKGDDILLALQGKENVAINRGFLAKALRVFTPVYDEHHRQIGVVAIGLELSHVTQ
+ QINSSRGSIIWSILFGALVGLLGTYALVKVLKRILFGLEPYEISTLFEQRQAMLQSIK
+ EGVIAVDDSGEVTLINHAAQALLDYRKTQDDAKLSTLSHAWSQVVDIREVLRSGTSRR
+ DEEIIVKGRLLLVNTVPVRSNGEIIGAISTFRDKTEVRQLMQRLDGMVNYADALRERS
+ HEFMNKLHVILGLLHLKSYKQLEAYIIKTANNYQEEIGLLLGKIKSPIIAGFLLSKIN
+ RASDLGHSLVISSDSQLPDSHNEDQVTVLITALGNLIENALEALGQESGGEISVSLHY
+ RHGWLHCEVSDDGPGIESENIDAIFEKGVSSKGAGRGVGLALVKQQVEALGGVISVES
+ EPGIFTQFFVQLPWDGERTSL"
+ misc_feature 3245583..3247169
+ /locus_tag="SARI_03343"
+ /note="sensory histidine kinase DcuS; Provisional; Region:
+ PRK11086"
+ /db_xref="CDD:236839"
+ misc_feature 3246204..>3246323
+ /locus_tag="SARI_03343"
+ /note="PAS domain; Region: PAS; smart00091"
+ /db_xref="CDD:214512"
+ misc_feature 3246843..3247142
+ /locus_tag="SARI_03343"
+ /note="Histidine kinase-like ATPases; This family includes
+ several ATP-binding proteins for example: histidine
+ kinase, DNA gyrase B, topoisomerases, heat shock protein
+ HSP90, phytochrome-like ATPases and DNA mismatch repair
+ proteins; Region: HATPase_c; cd00075"
+ /db_xref="CDD:238030"
+ misc_feature order(3246861..3246863,3246873..3246875,3246882..3246884,
+ 3246957..3246959,3246963..3246965,3246969..3246971,
+ 3246975..3246980,3247041..3247052,3247098..3247100,
+ 3247104..3247106,3247119..3247124,3247128..3247130)
+ /locus_tag="SARI_03343"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature 3246873..3246875
+ /locus_tag="SARI_03343"
+ /note="Mg2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature order(3246969..3246971,3246975..3246977,3247041..3247043,
+ 3247047..3247049)
+ /locus_tag="SARI_03343"
+ /note="G-X-G motif; other site"
+ /db_xref="CDD:238030"
+ gene 3247169..3247888
+ /locus_tag="SARI_03344"
+ CDS 3247169..3247888
+ /locus_tag="SARI_03344"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:HMMPfam:IPR001789"
+ /inference="protein motif:HMMPIR:IPR008247"
+ /inference="protein motif:HMMSmart:IPR001789"
+ /inference="protein motif:superfamily:IPR011006"
+ /inference="similar to AA sequence:INSD:AAX68087.1"
+ /note="response regulator in two-component regulatory
+ system with DcuS; phosphorylated DcuR activates
+ transcription of genes involved in anaerobic fumarate
+ respiration"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional activator DcuR"
+ /protein_id="YP_001572318.1"
+ /db_xref="GI:161505206"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR008247"
+ /db_xref="InterPro:IPR011006"
+ /translation="MINVLIVDDDAMVAELNRRYVAQISGFHCCGTASTLEKAKEFIF
+ NSENHIDLILLDIYMQQENGLDLLPVLHSAGCKSDVIVISSAADAATIKDSLHYGVVD
+ YLIKPFQATRFEEALTGWLRKKTAMEKRQYYEQSELDLLIHGNLSSEQEPRRLPKGLT
+ QQTLRTLCQWIDAHQDQEFSTDELANEVNISRVSCRKYLIWLVNCHILFTSIHYGVTG
+ RPVYRYRVQPEHYSLLKQYCQ"
+ misc_feature 3247169..3247885
+ /locus_tag="SARI_03344"
+ /note="DNA-binding transcriptional activator DcuR;
+ Provisional; Region: PRK10430"
+ /db_xref="CDD:182454"
+ misc_feature 3247181..3247531
+ /locus_tag="SARI_03344"
+ /note="Signal receiver domain; originally thought to be
+ unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
+ recently identified in eukaroytes ETR1 Arabidopsis
+ thaliana; this domain receives the signal from the sensor
+ partner in a two-component systems; Region: REC; cd00156"
+ /db_xref="CDD:238088"
+ misc_feature order(3247190..3247195,3247334..3247336,3247358..3247360,
+ 3247418..3247420,3247475..3247477,3247484..3247489)
+ /locus_tag="SARI_03344"
+ /note="active site"
+ /db_xref="CDD:238088"
+ misc_feature 3247334..3247336
+ /locus_tag="SARI_03344"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238088"
+ misc_feature order(3247343..3247348,3247352..3247360)
+ /locus_tag="SARI_03344"
+ /note="intermolecular recognition site; other site"
+ /db_xref="CDD:238088"
+ misc_feature 3247484..3247492
+ /locus_tag="SARI_03344"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238088"
+ gene 3248205..3248471
+ /locus_tag="SARI_03345"
+ CDS 3248205..3248471
+ /locus_tag="SARI_03345"
+ /inference="similar to AA sequence:REFSEQ:YP_153176.1"
+ /note="'COG: NOG31352 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572319.1"
+ /db_xref="GI:161505207"
+ /translation="MDNTHICEQIRAFTRRTNNFKKWRDNDHINHILFDFFRDLYDGK
+ TQKTNKFFLFFKQINHKSLFSFTAPAHRQRVTSSEHRYRKKIIT"
+ gene 3248618..3249958
+ /locus_tag="SARI_03346"
+ CDS 3248618..3249958
+ /locus_tag="SARI_03346"
+ /inference="protein motif:BlastProDom:IPR004668"
+ /inference="protein motif:HMMPfam:IPR004668"
+ /inference="protein motif:HMMPIR:IPR004668"
+ /inference="protein motif:HMMTigr:IPR004668"
+ /inference="similar to AA sequence:INSD:AAX68086.1"
+ /note="'functions in anaerobic transport of
+ C4-dicarboxylate compounds such as fumarate; similar to
+ DcuA; DcuA and DcuB function as independent and mutually
+ redundant C4-dicarboxylate (aspartate, malate, fumarate
+ and succinate) transporters'"
+ /codon_start=1
+ /transl_table=11
+ /product="anaerobic C4-dicarboxylate transporter"
+ /protein_id="YP_001572320.1"
+ /db_xref="GI:161505208"
+ /db_xref="InterPro:IPR004668"
+ /translation="MLFSIQLLIILICLFYGARKGGIALGLLGGIGLVILVFVFHLQP
+ GKPPVDVMLVIIAVVAASATLQASGGLDVMLQIAEKLLRRNPKYVSIVAPFVTCTLTI
+ LCGTGHVVYTILPIIYDVAIKNNIRPERPMAASSIGAQMGIIASPVSVAVVSLVAMLG
+ NVTFDGRHLEFLDLLSITIPSTLLGILAIGIFSWFRGKDLDKDEAFQKFISVPENRQY
+ VYGDTATLLDKKLPKSNWLAMWIFLAAIAVVAILGADSSLRPTFGGKPLSMVLVIQMF
+ MLLTGALIIILTKTNPASISKNEVFRSGMIAIVAVYGIAWMAETMFGAHMSEIQGVLG
+ EMVKEYPWAYAIVLLLVSKFVNSQAAALAAIVPVALAIGVDPAYIVASAPACYGYYIL
+ PTYPSDLAAIQFDRSGTTHIGRFVINHSFILPGLIGVSVSCVFGWIFAAMYGFL"
+ misc_feature 3248621..3249949
+ /locus_tag="SARI_03346"
+ /note="Anaerobic C4-dicarboxylate transporter [General
+ function prediction only]; Region: DcuB; COG2704"
+ /db_xref="CDD:225332"
+ misc_feature 3248621..3249949
+ /locus_tag="SARI_03346"
+ /note="anaerobic C4-dicarboxylate transporter; Reviewed;
+ Region: PRK12489"
+ /db_xref="CDD:237115"
+ gene 3250028..3251674
+ /locus_tag="SARI_03347"
+ CDS 3250028..3251674
+ /locus_tag="SARI_03347"
+ /inference="protein motif:HMMPfam:IPR004646"
+ /inference="protein motif:HMMPfam:IPR004647"
+ /inference="protein motif:HMMPIR:IPR011167"
+ /inference="protein motif:HMMTigr:IPR004646"
+ /inference="protein motif:HMMTigr:IPR004647"
+ /inference="protein motif:ScanRegExp:IPR000362"
+ /inference="similar to AA sequence:INSD:CAD09285.1"
+ /note="'KEGG: stt:t4207 1.2e-291 fumB; fumarate hydratase
+ class I K01676;
+ COG: COG1951 Tartrate dehydratase alpha subunit/Fumarate
+ hydratase class I, N-terminal domain;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572321.1"
+ /db_xref="GI:161505209"
+ /db_xref="InterPro:IPR000362"
+ /db_xref="InterPro:IPR004646"
+ /db_xref="InterPro:IPR004647"
+ /db_xref="InterPro:IPR011167"
+ /translation="MSKKEFIYQAPFPMGEDKTEYYLLTSDYVSVGSFEGESILKVEP
+ QALTLLAQQAFHDASFMLRPEHQQQVASILHDPEASENDKYVALQFLRNSDIAAKGVL
+ PTCQDTGTAIIMGKKGQRVWTGGGDEAALSKGVFNTYIEDNLRYSQNAPLDMYKEVNT
+ GSNLPAQIDLYAVDGDEYKFLCVAKGGGSANKTYLYQETKALLTPGKLKNFLVEKMRT
+ LGTAACPPYHIAFVIGGTSAETTLKTVKLASTHYYDTLPTEGNEHGQAFRDLQLEQEL
+ LEEAQKLGLGAQFGGKYFAHDIRVIRLPRHGASCPVGMGVSCSADRNIKAKINREGIW
+ IEKLEHNPGQYIPSALRQAGEGDAVKVDLNRPMKEILAQLSQYPVSTRLSLTGTIIVG
+ RDIAHAKLKERIESGKGLPQYIKDHPIYYAGPAKTPAGYPSGSLGPTTAGRMDSYVDL
+ LQSHGGSMIMLAKGNRSQQVTDACKKHGGFYLGSIGGPAAVLAQQSIKHLECVEYPEL
+ GMEAIWKIEVEDFPAFILVDDKGNDFFQQIVSKQCANCEK"
+ misc_feature 3250031..3251638
+ /locus_tag="SARI_03347"
+ /note="fumarate hydratase; Provisional; Region: PRK15389"
+ /db_xref="CDD:237955"
+ misc_feature 3250139..3251059
+ /locus_tag="SARI_03347"
+ /note="Tartrate dehydratase alpha subunit/Fumarate
+ hydratase class I, N-terminal domain [Energy production
+ and conversion]; Region: TtdA; COG1951"
+ /db_xref="CDD:224862"
+ misc_feature 3251021..3251641
+ /locus_tag="SARI_03347"
+ /note="Fumarase C-terminus; Region: Fumerase_C; pfam05683"
+ /db_xref="CDD:218690"
+ gene 3251776..3252402
+ /locus_tag="SARI_03348"
+ CDS 3251776..3252402
+ /locus_tag="SARI_03348"
+ /inference="similar to AA sequence:REFSEQ:YP_859730.1"
+ /note="'COG: COG3647 Predicted membrane protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572322.1"
+ /db_xref="GI:161505210"
+ /translation="MIRTLPPSLLNSGALILSLLLFYTGLMSGDKITWLMEVTPVIIV
+ APLLLVTARRYPLTPLLYTLIFFHAIILMVGGMYTYAKVPIGFEVQEWLELSRNPYDK
+ LGHFFQGLVPALAAREILARGQIVRGRKMLAFLVCCVALAISATYELIEWWAALAMGQ
+ GADDFLGTQGDPWDTQSDMFCALLGALTTVILLARAHSRQLEHYQLID"
+ misc_feature 3251776..3252399
+ /locus_tag="SARI_03348"
+ /note="hypothetical protein; Provisional; Region:
+ PRK09867"
+ /db_xref="CDD:182124"
+ gene complement(3252637..3254208)
+ /locus_tag="SARI_03349"
+ CDS complement(3252637..3254208)
+ /locus_tag="SARI_03349"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:INSD:EAQ65283.1"
+ /note="'KEGG: bur:Bcep18194_C7259 2.4e-105 ABC
+ transporter, duplicated ATPase domains;
+ COG: COG0488 ATPase components of ABC transporters with
+ duplicated ATPase domains;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572323.1"
+ /db_xref="GI:161505211"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MNRKDQVFLSTNQLSYHNTTNLLFNDVSLSLNSTEKVGLVGFNG
+ AGKSTLLQLLTKNLEPSSGLVTHPKSLRYYLVEQRFPEHLLSLTPEEALLDILETDER
+ ISESWRAEVILENIGIGFTQHDTPCSELSGGQQTRLLLGRAQLSTPNVLLLDEPSNHL
+ DLPTLIWLEAFLADWRGSLILVSHDTRLLDTVTNSTWIIANGGVHQYRLPCTQALVQH
+ EQSDLACQQQYQDQANEIERIEASARQLAVWGKDQHSKSSARKAQSMFKRVDKLKLEQ
+ NTLPEPYPWNLSFPGQMLPAKRLLFCNEVVVRAPRQTNILYTIDELLIQPGEKIALIG
+ ANGMGKSTLLQLIWKSYRDRDRAITLHDSTVMAYYDQLQNGVNSELDIMNALSSFCST
+ SRVNANNEQLKQALLKAGFPWERLQSKVKTLSGGERARLLFAGISLINSHLLLLDEPT
+ NHLDISGKKALERQLEEFNGTVLLVSHDRSLIEKVCKRFLVISDGKLHSFNDYRQAYS
+ ASQMTVEGHLLSNAS"
+ misc_feature complement(3252700..3254184)
+ /locus_tag="SARI_03349"
+ /note="ATPase components of ABC transporters with
+ duplicated ATPase domains [General function prediction
+ only]; Region: Uup; COG0488"
+ /db_xref="CDD:223562"
+ misc_feature complement(3253600..3254175)
+ /locus_tag="SARI_03349"
+ /note="ATP-binding cassette domain of elongation factor 3,
+ subfamily F; Region: ABCF_EF-3; cd03221"
+ /db_xref="CDD:213188"
+ misc_feature complement(3253390..3253614)
+ /locus_tag="SARI_03349"
+ /note="ABC transporter; Region: ABC_tran_2; pfam12848"
+ /db_xref="CDD:221805"
+ misc_feature complement(3252721..3253269)
+ /locus_tag="SARI_03349"
+ /note="ATP-binding cassette domain of elongation factor 3,
+ subfamily F; Region: ABCF_EF-3; cd03221"
+ /db_xref="CDD:213188"
+ gene complement(3254198..3255445)
+ /locus_tag="SARI_03350"
+ CDS complement(3254198..3255445)
+ /locus_tag="SARI_03350"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="similar to AA sequence:REFSEQ:ZP_01310921.1"
+ /note="'KEGG: bcz:BCZK2057 8.0e-20 macrolide efflux
+ protein K00953;
+ COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572324.1"
+ /db_xref="GI:161505212"
+ /db_xref="InterPro:IPR011701"
+ /translation="MDSGHWDKRMFRAEVKERLALFENKNFFLFTVSGLFATFGNGLN
+ YIALSWLAYNKTDSVKGVAIMMFCIWMPSILFAPLFGLLADRYNRKAQIIISNLVRGI
+ VIVAWVLMWEMNIEPDLMILCSLLGVFISFYMPSAVPFIQSIVSEEDLVSANATIDMV
+ YEFGTIVGMGLSGFILAVVGIKGTLLIGGILFIIAGLFNLAMRTVVTSENANKQSGSW
+ WYNYTSSLRYFKSKPALFMPYMSQMIIMVLLMTIPIILVPYTREVLHASTRVFALYEA
+ LYSLGVLAGGFLSPVLCKKISIRKTLALLLLVMAGGLYILSVNDAVILVFPIYFLIGF
+ GISSWALSISLSQLHCAPEYQGRLQATFNGLSGIFILAIYLLMAKEGNGLSSQGVYLA
+ QSVLALAGIVIVLFYRKGEHRES"
+ misc_feature complement(3254222..3255367)
+ /locus_tag="SARI_03350"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature complement(3254339..3255367)
+ /locus_tag="SARI_03350"
+ /note="H+ Antiporter protein; Region: 2A0121; TIGR00900"
+ /db_xref="CDD:162098"
+ misc_feature complement(order(3254336..3254338,3254345..3254350,
+ 3254357..3254362,3254369..3254374,3254405..3254407,
+ 3254414..3254419,3254429..3254431,3254435..3254440,
+ 3254447..3254449,3254588..3254590,3254600..3254602,
+ 3254609..3254611,3254621..3254623,3254633..3254635,
+ 3254675..3254677,3254684..3254689,3254696..3254701,
+ 3254708..3254710,3254951..3254953,3254969..3254974,
+ 3254981..3254986,3255020..3255022,3255029..3255034,
+ 3255041..3255046,3255053..3255058,3255203..3255208,
+ 3255212..3255217,3255227..3255229,3255236..3255241,
+ 3255248..3255250,3255299..3255304,3255308..3255316,
+ 3255323..3255325))
+ /locus_tag="SARI_03350"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene complement(3255423..3256229)
+ /locus_tag="SARI_03351"
+ CDS complement(3255423..3256229)
+ /locus_tag="SARI_03351"
+ /inference="protein motif:HMMPanther:IPR013109"
+ /inference="protein motif:HMMSmart:IPR003347"
+ /note="'COG: KOG2130 Phosphatidylserine-specific receptor
+ PtdSerR, contains JmjC domain;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572325.1"
+ /db_xref="GI:161505213"
+ /db_xref="InterPro:IPR003347"
+ /db_xref="InterPro:IPR013109"
+ /translation="MQLFKNEQAFLEYCRVNDLTGTCFLIHGYCFQWPLFTQGNFYSI
+ EENFGSDKIFIEEGINKSGRVEVTVSDYIKRIQSGVKGMGNWSWQPHLSHAKSLNNSF
+ TVPEAITLNNIEKSLVGELVLAPWILMSATETVTNMHQDMLSVNGIVGQLQGVKEFTL
+ VAPQYALEEGKFYSTYELETLGIPFECVVLHPGDFLYFPAHWWHQAKTIECSVSFIHS
+ TVNLYNMTAFLDDAISQMPALIQRVQSAAKKRGYFGYRIKWLCNGFRSLG"
+ misc_feature complement(3255600..>3256040)
+ /locus_tag="SARI_03351"
+ /note="Cupin-like domain; Region: Cupin_8; pfam13621"
+ /db_xref="CDD:222269"
+ gene complement(3256216..3257052)
+ /locus_tag="SARI_03352"
+ CDS complement(3256216..3257052)
+ /locus_tag="SARI_03352"
+ /note="'Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572326.1"
+ /db_xref="GI:161505214"
+ /translation="MTITNKDIFSIFLNREVIEQECALWRQFVACNKKQTILNFLTEN
+ HSYASWPEKVVCYQPDNREDYQAVLKSVAVEMQRQNEDFSEIHYSVMNSYRENILEAI
+ ELLSTNSAVMDYTLRNIIGRIVIVSCDSLIATSSVLFLGLIVISPKENWTLFDYIENI
+ IHEMSHIELYIKQLLDPLVSTGIYLKSPFRDQPRPANGVFHAAFVLSRIIFYMHNLTF
+ SGVYKLPAAVNLNKASLLLKETLAQFDHKNCLTVQGSSMAEEMSLVLSQFQKEDSVSA
+ II"
+ misc_feature complement(3256441..>3256656)
+ /locus_tag="SARI_03352"
+ /note="HEXXH motif domain; Region: mod_HExxH; TIGR04267"
+ /db_xref="CDD:234529"
+ gene complement(3257039..3258007)
+ /locus_tag="SARI_03353"
+ CDS complement(3257039..3258007)
+ /locus_tag="SARI_03353"
+ /inference="protein motif:HMMPfam:IPR000594"
+ /inference="protein motif:superfamily:IPR009036"
+ /inference="similar to AA sequence:REFSEQ:YP_001032057.1"
+ /note="'KEGG: ech:ECH_1107 3.6e-14 THIF;
+ adenylyltransferase ThiF;
+ COG: COG0476 Dinucleotide-utilizing enzymes involved in
+ molybdopterin and THIamine biosynthesis family 2;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572327.1"
+ /db_xref="GI:161505215"
+ /db_xref="InterPro:IPR000594"
+ /db_xref="InterPro:IPR009036"
+ /translation="MKIKLNASIIRTEDKIIFLGKKNYQMTDIIGPEADNFLTKFETG
+ LDETELQSWLKDDSCYALYKKMSELNLLVLSENKYGGTVLEKTYDFLNFHLGTLHSPF
+ SFENDIHIALIGCGGTGSNIGLCLASSGIKKFTLIDYDRIQISNLNRQFAYDSADIGK
+ SKAQCLKDKLLRINSDVNISLYERKITCSEDLHCLSNDVSLLVSAIDTPAVKSSLYIV
+ EYAMRHKVPVIFGAAGYDTITAGPLLTTETAKATFHRLLQRSSYAVTKPITGSIASTN
+ LLLSAILANNITSFFYPFSKPDLINVRKIYNPVSMITMREIYYDNN"
+ misc_feature complement(3257306..3257683)
+ /locus_tag="SARI_03353"
+ /note="Superfamily of activating enzymes (E1) of the
+ ubiquitin-like proteins. This family includes classical
+ ubiquitin-activating enzymes E1, ubiquitin-like (ubl)
+ activating enzymes and other mechanistic homologes, like
+ MoeB, Thif1 and others. The common...; Region:
+ E1_enzyme_family; cd01483"
+ /db_xref="CDD:238760"
+ misc_feature complement(order(3257375..3257377,3257393..3257395,
+ 3257522..3257524,3257561..3257563,3257588..3257590,
+ 3257594..3257596,3257654..3257656,3257660..3257662,
+ 3257666..3257668))
+ /locus_tag="SARI_03353"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238760"
+ misc_feature complement(order(3257309..3257314,3257372..3257374,
+ 3257654..3257656))
+ /locus_tag="SARI_03353"
+ /note="substrate interface [chemical binding]; other site"
+ /db_xref="CDD:238760"
+ gene complement(3257997..3259337)
+ /locus_tag="SARI_03354"
+ CDS complement(3257997..3259337)
+ /locus_tag="SARI_03354"
+ /note="'COG: COG4166 ABC-type oligopeptide transport
+ system, periplasmic component;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572328.1"
+ /db_xref="GI:161505216"
+ /translation="MNNLNVAIDVFPYKEDIWSICDYSGEQIYSKLALPLFSLEKDEI
+ KPLGAESFQQTVDSFRINIRKDLFWSNGDNVKAVDYVRAIKHICYDENNRYNKLLASV
+ AKLGVETEIHNDHSFTIQTSWYDPFITQYLSLLNFSPKHEHDDDVFAGPYVLVKKQDN
+ LYQLIANKYFMLDKNFPAVEKINYLLVEKDPNGEAFFDGKVHVSCNTAVNLKNYRIFT
+ AKKNFVAAEGNLMMMLSPGIKFDKLPNHVKEILTSKINRNTISARYDNILKPVASWMS
+ MYFDGSYYPLRDAIAYKKSSFIIDISYEDFYPNDEILEDISKQLSGFNIEVRKHQDKY
+ GYWLSESHLRFEIRKIPQRNPVQIIRSDLSNISTSHAKFEKIKKLYSMLFTEALSSQQ
+ PEIFKVIDFYLRDYCLSLPLFIFPTGFFCHSSILENTLYAPGRKVLIKEAVSEN"
+ misc_feature complement(<3258354..3259328)
+ /locus_tag="SARI_03354"
+ /note="The substrate-binding domain of an ABC-type
+ nickel/oligopeptide-like import system contains the type 2
+ periplasmic binding fold; Region:
+ PBP2_NikA_DppA_OppA_like; cl01709"
+ /db_xref="CDD:242664"
+ gene complement(3259356..3260300)
+ /locus_tag="SARI_03355"
+ CDS complement(3259356..3260300)
+ /locus_tag="SARI_03355"
+ /inference="protein motif:HMMPfam:IPR013129"
+ /inference="protein motif:HMMSmart:IPR003347"
+ /inference="similar to AA sequence:REFSEQ:YP_111461.1"
+ /note="'KEGG: bpm:BURPS1710b_2148 4.9e-05 JmjC domain
+ protein K00476;
+ COG: KOG2130 Phosphatidylserine-specific receptor PtdSerR,
+ contains JmjC domain;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572329.1"
+ /db_xref="GI:161505217"
+ /db_xref="InterPro:IPR003347"
+ /db_xref="InterPro:IPR013129"
+ /translation="MSVFRPYVENVENVENVENNHFEETFFNKTQPVQYANLNSDMPA
+ YKKWSFEFFKARCSEILCQVSDNLEDPANITRKISISEYIDLMKNGEHCPYMTGWSYQ
+ KILPELDDDIFFPKFHPDDFIDRLPKRMQFRRRWVFFGKKGINCDLHIDCFSTSAWLL
+ MIEGQKTFRAISPLHRHHIEMGSSLFNEGIVSHLDKLNVEIFEFTLTPGTILYVPTGW
+ VHEIRNDTDNIMVTGGFTSRQHAIRFYKNYHSYISRDSNESDIAFNDYLEALTEDKFK
+ ISDEVRDSIIEEVAYTKEKIEILLRKNKVYEEIIKKTA"
+ misc_feature complement(3259605..3260216)
+ /locus_tag="SARI_03355"
+ /note="Cupin-like domain; Region: Cupin_8; pfam13621"
+ /db_xref="CDD:222269"
+ gene complement(3260366..3260578)
+ /locus_tag="SARI_03356"
+ CDS complement(3260366..3260578)
+ /locus_tag="SARI_03356"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572330.1"
+ /db_xref="GI:161505218"
+ /translation="MKITAFEFLFNNNPSQITGALTMNDFESKEFRSYVSPTETQDFD
+ VEFKIENVQLAEIELDNELLLATHRC"
+ gene 3260642..3260899
+ /locus_tag="SARI_03357"
+ CDS 3260642..3260899
+ /locus_tag="SARI_03357"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572331.1"
+ /db_xref="GI:161505219"
+ /translation="MLFYSYVSVTEFTKNHWLLINKPKYSREINGFFNEMVAPYILCH
+ SGAINRQYLSGADIMNVKTIGIDFVKEDFYVHRIDEHGSPR"
+ gene complement(3261085..3262515)
+ /locus_tag="SARI_03358"
+ CDS complement(3261085..3262515)
+ /locus_tag="SARI_03358"
+ /inference="protein motif:HMMTigr:IPR001927"
+ /inference="protein motif:ScanRegExp:IPR001927"
+ /inference="similar to AA sequence:SwissProt:P30878"
+ /note="'KEGG: eci:UTI89_C4210 3.3e-53 yicJ; hypothetical
+ symporter YicJ K03292;
+ COG: COG2211 Na+/melibiose symporter and related
+ transporters;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="melibiose:sodium symporter"
+ /protein_id="YP_001572332.1"
+ /db_xref="GI:161505220"
+ /db_xref="InterPro:IPR001927"
+ /translation="MGISLTTKLSYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLV
+ GTLFLIARIWDAINDPIMGWIVNATRSRWGKFKPWILIGTLTNSLVLFLLFSAHLFEG
+ TAQMVFVCVTYILWGMTYTIMDIPFWSLVPTITLDKREREQLVPFPRFFASLAGFVTA
+ GMTLPFVKYIGGADRGFGFQMFTLVLIAFFIASTIVTLRNVHEVYSSDNGVTAGRPHL
+ TLKTIVGLIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAG
+ AANLLTLVVFPRLVKMLSRRILWAGASVMPVLSCAGLFAMALADIHNAALIVAAGIFL
+ NIGTALFWVLQVIMVADTVDYGEFKLNIRCESIAYSVQTMVVKGGSAFAAFFIALVLG
+ LIGYTPNVAQSAQTLQGMQFIMIVLPVLFFMMTLVLYFRYYRLNGDMLRKIQIHLLDK
+ YRKAPSFVEQSDNPTISTVATGDVKA"
+ misc_feature complement(3261088..3262515)
+ /locus_tag="SARI_03358"
+ /note="melibiose:sodium symporter; Provisional; Region:
+ PRK10429"
+ /db_xref="CDD:182453"
+ misc_feature complement(3261166..3262494)
+ /locus_tag="SARI_03358"
+ /note="sugar (Glycoside-Pentoside-Hexuronide) transporter;
+ Region: gph; TIGR00792"
+ /db_xref="CDD:233128"
+ gene complement(3262599..3263954)
+ /locus_tag="SARI_03359"
+ CDS complement(3262599..3263954)
+ /locus_tag="SARI_03359"
+ /inference="protein motif:BlastProDom:IPR001088"
+ /inference="protein motif:FPrintScan:IPR001088"
+ /inference="protein motif:HMMPfam:IPR001088"
+ /inference="protein motif:ScanRegExp:IPR001088"
+ /inference="similar to AA sequence:REFSEQ:YP_219164.1"
+ /note="'KEGG: stm:STM4298 3.5e-248 melA;
+ alpha-galactosidase K07406;
+ COG: COG1486
+ Alpha-galactosidases/6-phospho-beta-glucosidases, family 4
+ of glycosyl hydrolases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="alpha-galactosidase"
+ /protein_id="YP_001572333.1"
+ /db_xref="GI:161505221"
+ /db_xref="InterPro:IPR001088"
+ /translation="MMTAPKITFIGAGSTIFVKNILGDVFHREALKSAHVALMDIDET
+ RLEESHIVVRKLMDSAGASGRITCHTNQKAALQDADFVVVAFQIGGYEPCTVTDFEVC
+ KRHGLEQTIADTLGPGGIMRALRTIPHLWRICEDMTEVCPKATMLNYVNPMAMNTWAM
+ YARYPHIKQVGLCHSVQGTAEELARDLNIDPASLRYRCAGINHMAFYLELERKTADGT
+ YVNLYPELLAAYDAGQAPKPNIHGNERCQNIVRYEMFKKLGYFVTESSEHFAEYTPWF
+ IKPGREDLIARYKVPLDEYPKRCVEQLANWHKELEEYKTAERIDIKPSREYASTIMNA
+ LWTGEPSVIYGNVRNEGLIDNLPQGSCVEVACLVDANGIQPTKVGTIPSHLAAMMQTN
+ INVQTLLTEAILTENRDRVYHAAMMDPHTAAVLGIEEIYALVDDLIAAHGDWLPAWLR
+ R"
+ misc_feature complement(3262608..3263945)
+ /locus_tag="SARI_03359"
+ /note="alpha-galactosidase; Provisional; Region: PRK15076"
+ /db_xref="CDD:185035"
+ misc_feature complement(3262641..3263942)
+ /locus_tag="SARI_03359"
+ /note="Glycoside Hydrolases Family 4; Alpha-glucosidases
+ and alpha-galactosidases; Region:
+ GH4_alpha_glucosidase_galactosidase; cd05297"
+ /db_xref="CDD:133433"
+ misc_feature complement(order(3263439..3263441,3263502..3263504,
+ 3263508..3263510,3263568..3263570,3263607..3263609,
+ 3263682..3263687,3263694..3263702,3263820..3263822,
+ 3263832..3263837,3263913..3263918))
+ /locus_tag="SARI_03359"
+ /note="NAD binding site [chemical binding]; other site"
+ /db_xref="CDD:133433"
+ misc_feature complement(order(3263151..3263153,3263160..3263162,
+ 3263346..3263348,3263436..3263438,3263502..3263504,
+ 3263607..3263609))
+ /locus_tag="SARI_03359"
+ /note="sugar binding site [chemical binding]; other site"
+ /db_xref="CDD:133433"
+ misc_feature complement(order(3263346..3263348,3263436..3263438))
+ /locus_tag="SARI_03359"
+ /note="divalent metal binding site [ion binding]; other
+ site"
+ /db_xref="CDD:133433"
+ misc_feature complement(order(3262824..3262835,3262839..3262841,
+ 3262845..3262850,3262905..3262907,3262941..3262943,
+ 3263313..3263315,3263322..3263324,3263370..3263372,
+ 3263379..3263381))
+ /locus_tag="SARI_03359"
+ /note="putative tetramer (dimer of dimers) interface
+ [polypeptide binding]; other site"
+ /db_xref="CDD:133433"
+ misc_feature complement(order(3262671..3262673,3262677..3262679,
+ 3262683..3262685,3262689..3262691,3262704..3262709,
+ 3262716..3262721,3262728..3262730,3262734..3262736,
+ 3262752..3262754,3262764..3262766,3262773..3262775,
+ 3262785..3262787,3262794..3262796,3262806..3262811,
+ 3263145..3263147,3263181..3263183))
+ /locus_tag="SARI_03359"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:133433"
+ gene 3264223..3265155
+ /locus_tag="SARI_03360"
+ CDS 3264223..3265155
+ /locus_tag="SARI_03360"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR000005"
+ /inference="protein motif:HMMSmart:IPR000005"
+ /inference="protein motif:ScanRegExp:IPR000005"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="protein motif:superfamily:IPR011051"
+ /inference="similar to AA sequence:INSD:CAD09282.1"
+ /note="'KEGG: bha:BH0394 2.0e-11 adaA;
+ methylphosphotriester-DNA alkyltransferase (AraC/XylS
+ family) K00567;
+ COG: COG4753 Response regulator containing CheY-like
+ receiver domain and AraC-type DNA-binding domain;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional regulator MelR"
+ /protein_id="YP_001572334.1"
+ /db_xref="GI:161505222"
+ /db_xref="InterPro:IPR000005"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR011051"
+ /db_xref="InterPro:IPR012287"
+ /translation="MSTQAISLLPPDPHMCNGDEKQTRSPLSLYSEYQRLDVELRPPH
+ RMASSHWHGQVEVNVPFDGDVEYLINNEVVQIKQGHITLFWACTPHQLTRPGNCRQMA
+ IFSLPMHLFLSWPLDRDLINHVTHGMVVKSLATQQLSTFEVLRWQQETSSPNEQIRQL
+ AIDEIGLMLKRFSLSGWQPILLNKTSRTHKNSVSRHAQFYVSQMLGFIADNYDQALTI
+ NDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKTILDVALTAGF
+ RSSSRFYSTFSKFVGMSPQQYRKLSQQRRQTMSG"
+ misc_feature 3264247..3265152
+ /locus_tag="SARI_03360"
+ /note="DNA-binding transcriptional regulator MelR;
+ Provisional; Region: PRK10371"
+ /db_xref="CDD:182416"
+ misc_feature 3264844..3264969
+ /locus_tag="SARI_03360"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ gene 3265385..3267655
+ /locus_tag="SARI_03361"
+ CDS 3265385..3267655
+ /locus_tag="SARI_03361"
+ /inference="protein motif:HMMPfam:IPR000310"
+ /inference="protein motif:HMMPfam:IPR005308"
+ /inference="protein motif:HMMPfam:IPR008286"
+ /inference="protein motif:HMMPIR:IPR011193"
+ /inference="protein motif:ScanRegExp:IPR000310"
+ /inference="protein motif:superfamily:IPR008286"
+ /inference="protein motif:superfamily:IPR011006"
+ /note="'KEGG: sty:STY4495 0. adi; arginine decarboxylase
+ K01584;
+ COG: COG1982 Arginine/lysine/orniTHIne decarboxylases;
+ Psort location: cytoskeletal, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572335.1"
+ /db_xref="GI:161505223"
+ /db_xref="InterPro:IPR000310"
+ /db_xref="InterPro:IPR005308"
+ /db_xref="InterPro:IPR008286"
+ /db_xref="InterPro:IPR011006"
+ /db_xref="InterPro:IPR011193"
+ /translation="MMKVLIVESEFLHQDTWVGNAVERLADALSQQDVTVIKSTSFDD
+ GYAILSANEAIDCLMFSYQMEQPDEHLSVRQLIGKLHERQENVPVFLLGDREKATASL
+ DRDLLELVDEFAWILEDTADFIAGRAVAAMTRYRQQLLPPLFNALMKYSDIHEYSWAA
+ PGHQGGVGFTKTPAGRFYHDYYGENLFRSDMGIERTTLGSLLDHTGAFGESEKNAARV
+ FGADRSWSVVVGTSGSNRTIMQACMTDNDVVVLDRNCHKSIEQGLILTGAKPVYMVPS
+ RNRYGIIGPIYPQEMQPETLQKKISASPLTKTKAGQKPSYSVVTNCTYDGVCYNAKEA
+ QNLLAKTSDRIHFDEAWYGYARFNPIYCDHYAMRGEPGDHNGPTVFATHSTHKLLNAL
+ SQASYIHVREGRGSVNFSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQE
+ VIDEAVDFRQAMARLYKEFTDEGDWFFKPWNKDVVTDPQTGKTYDFADAPAKLLATDQ
+ NCWVMRPGETWHGFKDLPDNWSMLDPIKVSILAPGMGDDGELEASGVPAALVTAWLGR
+ HGIVPTRTTDFQIMFLFSMGVTRGKWGTLINTLCSFKHHYDANTPLEQVMPELVQDYP
+ DTYANMGIHDLGDKMFSWLRENNPGARLNAAYSTLPAAEITPRDAYNAIVNDNIEMVA
+ IENLPGRIAANSVIPYPPGIPMLLSGENFGDENSPQVGYLRSLQSWDHHFPGFEHETE
+ GTEIIDGVYHVMCVKA"
+ misc_feature 3265388..3267652
+ /locus_tag="SARI_03361"
+ /note="arginine decarboxylase; Provisional; Region:
+ PRK15029"
+ /db_xref="CDD:184989"
+ misc_feature 3265439..3265789
+ /locus_tag="SARI_03361"
+ /note="Orn/Lys/Arg decarboxylase, N-terminal domain;
+ Region: OKR_DC_1_N; pfam03709"
+ /db_xref="CDD:217683"
+ misc_feature 3265808..3266776
+ /locus_tag="SARI_03361"
+ /note="Ornithine decarboxylase family. This family belongs
+ to pyridoxal phosphate (PLP)-dependent aspartate
+ aminotransferase superfamily (fold I). The major groups in
+ this CD corresponds to ornithine decarboxylase (ODC),
+ arginine decarboxylase (ADC) and lysine...; Region:
+ Orn_deC_like; cd00615"
+ /db_xref="CDD:99739"
+ misc_feature order(3265952..3265954,3265967..3265969,3265991..3265993,
+ 3266066..3266074,3266078..3266083,3266090..3266092,
+ 3266102..3266110,3266114..3266119,3266150..3266155,
+ 3266540..3266545,3266552..3266566,3266624..3266629,
+ 3266633..3266641,3266645..3266647,3266666..3266668,
+ 3266675..3266677,3266684..3266686,3266723..3266728)
+ /locus_tag="SARI_03361"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99739"
+ misc_feature order(3266072..3266080,3266150..3266152,3266156..3266158,
+ 3266342..3266344,3266426..3266428,3266432..3266437,
+ 3266534..3266536,3266540..3266545)
+ /locus_tag="SARI_03361"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:99739"
+ misc_feature 3266543..3266545
+ /locus_tag="SARI_03361"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:99739"
+ misc_feature 3267230..3267631
+ /locus_tag="SARI_03361"
+ /note="Orn/Lys/Arg decarboxylase, C-terminal domain;
+ Region: OKR_DC_1_C; pfam03711"
+ /db_xref="CDD:112521"
+ gene 3267952..3268713
+ /locus_tag="SARI_03362"
+ CDS 3267952..3268713
+ /locus_tag="SARI_03362"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR000005"
+ /inference="protein motif:HMMSmart:IPR000005"
+ /inference="protein motif:ScanRegExp:IPR000005"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:INSD:AAV79857.1"
+ /note="'KEGG: bli:BL05281 2.7e-05 adaA;
+ methylphosphotriester-DNA alkyltransferase and
+ transcriptional regulator (AraC/XylS family) K00567;
+ COG: COG2207 AraC-type DNA-binding domain-containing
+ proteins;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572336.1"
+ /db_xref="GI:161505224"
+ /db_xref="InterPro:IPR000005"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /translation="MRICSNEPCIVVLTEKDTWLRVNGKEPVSLKTNHMAILACENNI
+ IEISSLNSVLVIQVSRNNIKDYLQFLNKDLSHLPVWQRNDAPLLTAPCLTPDIFRVAA
+ RYSAMETKDEITIERTRSLLFTVLSRFLDHKKFISLLMHMLRSRISDSVYHIIQSDIH
+ KDWNLSAVASCLCLSPSLLKKKLKNENTSYSQIITTCRMRYAVNQLLMDGKNISQVSQ
+ LCGYNSTSYFISVFKEFYGMTPLHYVSQHREPSAA"
+ misc_feature 3268114..3268710
+ /locus_tag="SARI_03362"
+ /note="DNA-binding transcriptional regulator GadX;
+ Provisional; Region: PRK09978"
+ /db_xref="CDD:137624"
+ misc_feature 3268570..3268680
+ /locus_tag="SARI_03362"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ gene 3268853..3270190
+ /locus_tag="SARI_03363"
+ CDS 3268853..3270190
+ /locus_tag="SARI_03363"
+ /inference="protein motif:HMMPanther:IPR002293"
+ /inference="protein motif:HMMPfam:IPR004841"
+ /inference="similar to AA sequence:INSD:AAL23118.1"
+ /note="'KEGG: eci:UTI89_C0120 3.8e-18 aroP; aromatic amino
+ acid transport protein AroP K03293;
+ COG: COG0531 Amino acid transporters;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="arginine:agmatin antiporter"
+ /protein_id="YP_001572337.1"
+ /db_xref="GI:161505225"
+ /db_xref="InterPro:IPR002293"
+ /db_xref="InterPro:IPR004841"
+ /translation="MSSDADAHKVGLIPVTLMVSGNIMGSGVFLLPANLAATGGIAIY
+ GWLVTIIGALALSMVYAKMSSLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNI
+ AMVVIGVGYLSYFFPILKDPLVLTLTCVAVLWIFVLLNIVGPKMITRVQAVATVLALV
+ PIVGIAVFGWFWFKGETYMAAWNVSGMNTFGAIQSTLNVTLWSFIGVESASVAAGVVK
+ NPKRNVPIATIGGVLIAAICYVLSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGA
+ IVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLLIVGVLM
+ TIFQFSSMSPNAAKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPLYLAITF
+ IAFIYCIWAVVGSGAKEVMWSFVTLMVITALYALNYNRIHKNPYPLDAPVKQD"
+ misc_feature 3268853..3270187
+ /locus_tag="SARI_03363"
+ /note="arginine:agmatin antiporter; Provisional; Region:
+ PRK10644"
+ /db_xref="CDD:182613"
+ gene 3270322..3271965
+ /locus_tag="SARI_03364"
+ CDS 3270322..3271965
+ /locus_tag="SARI_03364"
+ /inference="protein motif:HMMPfam:IPR000917"
+ /inference="protein motif:HMMPfam:IPR012549"
+ /inference="similar to AA sequence:INSD:AAA72364.1"
+ /note="with ZipA and an unidentified 24 kDa protein forms
+ a complex involved in cell division"
+ /codon_start=1
+ /transl_table=11
+ /product="putative cell division protein"
+ /protein_id="YP_001572338.1"
+ /db_xref="GI:161505226"
+ /db_xref="InterPro:IPR000917"
+ /db_xref="InterPro:IPR012549"
+ /translation="MLTRFLKRPVLGQIAWLLLFSFYIAVCLNIAFYKQVLQDLPLNS
+ LRNVLVFISMPVVAFSVVNSVITLASFIWLNRLLACVFILVGAATQYFILTYGIIIDR
+ SMIANMMDTTPAETFALMTPQMVLTLGLSGILAAVIACWIKIRPATSRLRNGLYRLIS
+ VLISILFIILVAAFFYKDYASLFRNNKQLIKALSPSNSIVASWSWYSHQRLANLPLVR
+ IGEDAHRNPLMLKGDRKNLTILIVGETSRGDDFSLGGYPRDTNPRLAKDDVIYFPHTT
+ SCGTATVISVPCMFSDMPRKHYDEELAHHQEGLLDIIQRAGINVLWNDNDGGCKGACD
+ RVPHQNVTELNLAGQCIDGECYDEVLFHGLEDYINHLKGDGVIVLHTIGSHGPTYYNR
+ YPPQFKKFTPTCDTNEIQNCSQEQLVNTYDNTVLYVDYIVDKAINLLKSHQDKFTTSL
+ VYLSDHGESLGENGVYLHGLPYSIAPDTQKHVPMLIWLSKDYQQRYQIDQSCLQKRAS
+ TLDYSQDNLFSTMLGLTGVQTKYYQAADDILHPCRRLSE"
+ misc_feature 3270325..3271959
+ /locus_tag="SARI_03364"
+ /note="putative metal dependent hydrolase; Provisional;
+ Region: PRK11598"
+ /db_xref="CDD:183224"
+ misc_feature 3270490..3270960
+ /locus_tag="SARI_03364"
+ /note="Domain of unknown function (DUF1705); Region:
+ DUF1705; pfam08019"
+ /db_xref="CDD:149223"
+ misc_feature 3271036..3271917
+ /locus_tag="SARI_03364"
+ /note="Sulfatase; Region: Sulfatase; pfam00884"
+ /db_xref="CDD:216172"
+ gene 3271962..3272630
+ /locus_tag="SARI_03365"
+ CDS 3271962..3272630
+ /locus_tag="SARI_03365"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:BlastProDom:IPR001867"
+ /inference="protein motif:HMMPfam:IPR001789"
+ /inference="protein motif:HMMPfam:IPR001867"
+ /inference="protein motif:HMMSmart:IPR001789"
+ /inference="protein motif:ScanRegExp:IPR005829"
+ /inference="protein motif:superfamily:IPR011006"
+ /inference="similar to AA sequence:INSD:AAV92783.1"
+ /note="response regulator in two-component regulatory
+ system with BasS"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional regulator BasR"
+ /protein_id="YP_001572339.1"
+ /db_xref="GI:161505227"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR001867"
+ /db_xref="InterPro:IPR005829"
+ /db_xref="InterPro:IPR011006"
+ /translation="MKILIVEDDTLLLQGLILAAQTEGYACDGVSTARAAERSLESGH
+ YSLMVLDLGLPDEDGLHFLTRMRQKKYTLPVLILTARDTLNDRITGLDVGADDYLVKP
+ FALEELHARIRALLRRHNNQGESELAVGNLTLNMGRHQAWMDGQELTLTPKEYALLSR
+ LMLKAGSPVHREILYNDIYNWDNEPSTNTLEVHIHNLRDKVGKSRIRTVRGFGYMLVA
+ AEES"
+ misc_feature 3271962..3272627
+ /locus_tag="SARI_03365"
+ /note="DNA-binding transcriptional regulator BasR;
+ Provisional; Region: PRK10643"
+ /db_xref="CDD:182612"
+ misc_feature 3271971..3272270
+ /locus_tag="SARI_03365"
+ /note="Signal receiver domain; originally thought to be
+ unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
+ recently identified in eukaroytes ETR1 Arabidopsis
+ thaliana; this domain receives the signal from the sensor
+ partner in a two-component systems; Region: REC; cd00156"
+ /db_xref="CDD:238088"
+ misc_feature order(3271980..3271985,3272112..3272114,3272136..3272138,
+ 3272196..3272198,3272253..3272255,3272262..3272267)
+ /locus_tag="SARI_03365"
+ /note="active site"
+ /db_xref="CDD:238088"
+ misc_feature 3272112..3272114
+ /locus_tag="SARI_03365"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238088"
+ misc_feature order(3272121..3272126,3272130..3272138)
+ /locus_tag="SARI_03365"
+ /note="intermolecular recognition site; other site"
+ /db_xref="CDD:238088"
+ misc_feature 3272262..3272270
+ /locus_tag="SARI_03365"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238088"
+ misc_feature 3272340..3272609
+ /locus_tag="SARI_03365"
+ /note="Effector domain of response regulator. Bacteria and
+ certain eukaryotes like protozoa and higher plants use
+ two-component signal transduction systems to detect and
+ respond to changes in the environment. The system consists
+ of a sensor histidine kinase and...; Region: trans_reg_C;
+ cd00383"
+ /db_xref="CDD:238225"
+ misc_feature order(3272412..3272414,3272469..3272474,3272526..3272528,
+ 3272535..3272537,3272559..3272564,3272583..3272585,
+ 3272598..3272600)
+ /locus_tag="SARI_03365"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:238225"
+ gene 3272661..3273710
+ /locus_tag="SARI_03366"
+ CDS 3272661..3273710
+ /locus_tag="SARI_03366"
+ /inference="protein motif:Gene3D:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003660"
+ /inference="protein motif:HMMPfam:IPR003661"
+ /inference="protein motif:HMMSmart:IPR003594"
+ /inference="protein motif:HMMSmart:IPR003660"
+ /inference="protein motif:HMMSmart:IPR003661"
+ /inference="protein motif:superfamily:IPR003594"
+ /inference="protein motif:superfamily:IPR009082"
+ /inference="similar to AA sequence:SwissProt:P36557"
+ /note="'KEGG: sec:SC4170 7.7e-173 basS, basR; sensory
+ kinase in two-component regulatory system with BasR
+ K07643;
+ COG: COG0642 Signal transduction histidine kinase;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="sensor protein BasS/PmrB"
+ /protein_id="YP_001572340.1"
+ /db_xref="GI:161505228"
+ /db_xref="InterPro:IPR003594"
+ /db_xref="InterPro:IPR003660"
+ /db_xref="InterPro:IPR003661"
+ /db_xref="InterPro:IPR009082"
+ /translation="MTLRQRLMLTIGLILLVFQLISTFWLWHESTEQIQLFEQALRDN
+ RNNDRHIMHEIREAVASLIVPGVFMVSLTLLICYQAVRHITRPLAELQKELETRTADN
+ LAPIAIHSSILEIESVVSAINQLVTRLTTTLDNERLFTADVAHELRTPLAGVRLHLEL
+ LSKTHNIDVAPLIARLDQMMDSVSQLLQLARVGQSFSSGNYQEVKLLEDVILPSYDEL
+ NTMLETRQQTLLLPESATDVMVRGDATLLRMLLRNLVENAHRYSPEGTKITIHISAAP
+ DAIMAVEDEGPGIDESKCGKLSEAFVRMDSRYGGIGLGLSIVSRITQLHQGQFFLQNC
+ TDRTGTRAWVLLKKV"
+ misc_feature 3272661..3273704
+ /locus_tag="SARI_03366"
+ /note="sensor protein BasS/PmrB; Provisional; Region:
+ PRK10755"
+ /db_xref="CDD:236751"
+ misc_feature 3272844..3273047
+ /locus_tag="SARI_03366"
+ /note="HAMP domain; Region: HAMP; pfam00672"
+ /db_xref="CDD:216054"
+ misc_feature 3273069..3273233
+ /locus_tag="SARI_03366"
+ /note="Histidine Kinase A (dimerization/phosphoacceptor)
+ domain; Histidine Kinase A dimers are formed through
+ parallel association of 2 domains creating 4-helix
+ bundles; usually these domains contain a conserved His
+ residue and are activated via...; Region: HisKA; cd00082"
+ /db_xref="CDD:119399"
+ misc_feature order(3273075..3273077,3273087..3273089,3273099..3273101,
+ 3273108..3273110,3273120..3273122,3273129..3273131,
+ 3273174..3273176,3273183..3273185,3273195..3273197,
+ 3273204..3273206,3273216..3273218)
+ /locus_tag="SARI_03366"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119399"
+ misc_feature 3273093..3273095
+ /locus_tag="SARI_03366"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:119399"
+ misc_feature 3273399..3273698
+ /locus_tag="SARI_03366"
+ /note="Histidine kinase-like ATPases; This family includes
+ several ATP-binding proteins for example: histidine
+ kinase, DNA gyrase B, topoisomerases, heat shock protein
+ HSP90, phytochrome-like ATPases and DNA mismatch repair
+ proteins; Region: HATPase_c; cd00075"
+ /db_xref="CDD:238030"
+ misc_feature order(3273417..3273419,3273429..3273431,3273438..3273440,
+ 3273504..3273506,3273510..3273512,3273516..3273518,
+ 3273522..3273527,3273594..3273605,3273651..3273653,
+ 3273657..3273659,3273675..3273680,3273684..3273686)
+ /locus_tag="SARI_03366"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature 3273429..3273431
+ /locus_tag="SARI_03366"
+ /note="Mg2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature order(3273516..3273518,3273522..3273524,3273594..3273596,
+ 3273600..3273602)
+ /locus_tag="SARI_03366"
+ /note="G-X-G motif; other site"
+ /db_xref="CDD:238030"
+ gene complement(3273878..3275392)
+ /locus_tag="SARI_03367"
+ CDS complement(3273878..3275392)
+ /locus_tag="SARI_03367"
+ /inference="protein motif:HMMPfam:IPR005828"
+ /inference="protein motif:HMMTigr:IPR004736"
+ /inference="protein motif:ScanRegExp:IPR005829"
+ /inference="similar to AA sequence:SwissProt:P40862"
+ /note="'KEGG: cal:orf19.2425 0.00013 highly conserved
+ hypothetical protein K01804;
+ COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="proline/glycine betaine transporter"
+ /protein_id="YP_001572341.1"
+ /db_xref="GI:161505229"
+ /db_xref="InterPro:IPR004736"
+ /db_xref="InterPro:IPR005828"
+ /db_xref="InterPro:IPR005829"
+ /translation="MRTAMLKRKKIKPITLGDVTIIDDGKLRKAITAASLGNAMEWFD
+ FGVYGFVAYALGKVFFPGADPGVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKI
+ LAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYS
+ PDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEENFLEWGWRIPFFIALPLGIIG
+ LYLRHALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIAGKHWRSLLSCIGLVIATN
+ VTYYMLLTYMPSYLSHNLRYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVIM
+ GSIALFTLAIPAFILINSNIIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSA
+ LAAAFNISVLIAGLTPTLAAWLVESSQDLMMPAYYLMVIAVIGLITGISMKETANRPL
+ KGATPAASDIQEAKEILGEHYDNIEQKIDDIDQEIAELQVKRSRLVQQHPRIDE"
+ misc_feature complement(3273884..3275353)
+ /locus_tag="SARI_03367"
+ /note="proline/glycine betaine transporter; Provisional;
+ Region: PRK10642"
+ /db_xref="CDD:182611"
+ misc_feature complement(3274082..3275302)
+ /locus_tag="SARI_03367"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature complement(order(3274181..3274183,3274190..3274195,
+ 3274202..3274207,3274214..3274219,3274250..3274252,
+ 3274259..3274264,3274274..3274276,3274283..3274288,
+ 3274295..3274297,3274445..3274447,3274457..3274459,
+ 3274466..3274468,3274478..3274480,3274490..3274492,
+ 3274532..3274534,3274541..3274546,3274553..3274558,
+ 3274565..3274567,3274853..3274855,3274871..3274876,
+ 3274883..3274888,3274922..3274924,3274931..3274936,
+ 3274943..3274948,3274955..3274960,3275120..3275125,
+ 3275129..3275134,3275144..3275146,3275153..3275158,
+ 3275165..3275167,3275234..3275239,3275243..3275251,
+ 3275258..3275260))
+ /locus_tag="SARI_03367"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ misc_feature complement(3273884..3274021)
+ /locus_tag="SARI_03367"
+ /note="Osmosensory transporter coiled coil; Region:
+ Osmo_CC; pfam08946"
+ /db_xref="CDD:149880"
+ gene complement(3275325..3275486)
+ /locus_tag="SARI_03368"
+ CDS complement(3275325..3275486)
+ /locus_tag="SARI_03368"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572342.1"
+ /db_xref="GI:161505230"
+ /translation="MRDSVRALPPLDGDAGAVRQCPPYIALQGLAYEDSYAEKEKNKT
+ DYTGRCDHH"
+ gene 3275917..3276195
+ /locus_tag="SARI_03369"
+ CDS 3275917..3276195
+ /locus_tag="SARI_03369"
+ /inference="protein motif:HMMPfam:IPR013988"
+ /inference="protein motif:HMMTigr:IPR004624"
+ /inference="protein motif:superfamily:IPR011065"
+ /inference="similar to AA sequence:INSD:CAD09274.1"
+ /note="'KEGG: eci:UTI89_C4702 7.0e-44 phnA; hypothetical
+ protein PhnA K06193;
+ COG: COG2824 Uncharacterized Zn-ribbon-containing protein
+ involved in phosphonate metabolism;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572343.1"
+ /db_xref="GI:161505231"
+ /db_xref="InterPro:IPR004624"
+ /db_xref="InterPro:IPR011065"
+ /db_xref="InterPro:IPR013988"
+ /translation="MFICPECAHEWNDTEPALESDELIVKDANGNLLADGDSVTIVKD
+ LKVKGSSSMLKIGTKVKNIRLVEGDHNIDCKIDGFGPMKLKSEFVKKN"
+ misc_feature <3275917..3275952
+ /locus_tag="SARI_03369"
+ /note="PhnA Zinc-Ribbon; Region: PhnA_Zn_Ribbon;
+ pfam08274"
+ /db_xref="CDD:219772"
+ misc_feature 3275986..3276150
+ /locus_tag="SARI_03369"
+ /note="PhnA protein; Region: PhnA; pfam03831"
+ /db_xref="CDD:202780"
+ gene 3276315..3276758
+ /locus_tag="SARI_03370"
+ CDS 3276315..3276758
+ /locus_tag="SARI_03370"
+ /inference="protein motif:HMMPfam:IPR004360"
+ /inference="similar to AA sequence:INSD:CAD09273.1"
+ /note="'COG: COG2764 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572344.1"
+ /db_xref="GI:161505232"
+ /db_xref="InterPro:IPR004360"
+ /translation="MPLSPYISFAGNCADAIAYYQHTLGADLLYKISFGEMPPSAQDS
+ EEGCPSGMIFPDTAIAHANVRIAGNDIMMSDAIASGTAHYSGFTLVLDTQDVEEGKRW
+ FDDLAAQGQIEMDWQETFWAHGFGKVSDRFGVPWMINVVKQQPAT"
+ misc_feature 3276321..3276731
+ /locus_tag="SARI_03370"
+ /note="Escherichia coli PhnB and similar proteins; the E.
+ coli phnB gene is found next to an operon involved in the
+ cleavage of carbon-phosphorus bonds in unactivated
+ alkylphosphonates; Region: PhnB_like; cd06588"
+ /db_xref="CDD:176658"
+ misc_feature order(3276321..3276338,3276384..3276386,3276516..3276521,
+ 3276528..3276530,3276573..3276590,3276594..3276596,
+ 3276606..3276608,3276693..3276695,3276723..3276725)
+ /locus_tag="SARI_03370"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:176658"
+ misc_feature 3276339..3276728
+ /locus_tag="SARI_03370"
+ /note="Glyoxalase/Bleomycin resistance protein/Dioxygenase
+ superfamily; Region: Glyoxalase; pfam00903"
+ /db_xref="CDD:216182"
+ gene 3276891..3277679
+ /locus_tag="SARI_03371"
+ CDS 3276891..3277679
+ /locus_tag="SARI_03371"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR012693"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:REFSEQ:ZP_00720038.1"
+ /note="'KEGG: reh:H16_B1296 9.4e-65 phnC1; ABC-type
+ transporter, ATPase component: PhnT family;
+ COG: COG3638 ABC-type phosphate/phosphonate transport
+ system, ATPase component;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphonate/organophosphate ester transporter
+ subunit"
+ /protein_id="YP_001572345.1"
+ /db_xref="GI:161505233"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR012693"
+ /translation="MQTIIRVEKLSKTFQQNRALNAVDLNIAAGEMVALLGPSGSGKS
+ TLLRHLSGLITGDKTSESRIELLGHTVQCEGRLARDIRKSRAHTGCIFQQFNLVNRLT
+ VLENVLIGALGSTPLWRTCVRWFTRQQKQRAYQALTRVGMAHFAYQRVSTLSGGQQQR
+ VAIARALMQQAQVILADEPIASLDPESARIVMDTLRDINQTDGITVVVTLHQVDYALR
+ YCERIVALRQGNVFYDGGSQHFDNDRFDHLYRSINRVEQNAQAA"
+ misc_feature 3276891..3277676
+ /locus_tag="SARI_03371"
+ /note="phosphonate/organophosphate ester transporter
+ subunit; Provisional; Region: PRK09984"
+ /db_xref="CDD:182182"
+ misc_feature 3276903..3277637
+ /locus_tag="SARI_03371"
+ /note="ATP-binding cassette domain of the binding
+ protein-dependent phosphonate transport system; Region:
+ ABC_PhnC_transporter; cd03256"
+ /db_xref="CDD:213223"
+ misc_feature 3276999..3277022
+ /locus_tag="SARI_03371"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213223"
+ misc_feature order(3277008..3277013,3277017..3277025,3277167..3277169,
+ 3277419..3277424,3277521..3277523)
+ /locus_tag="SARI_03371"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213223"
+ misc_feature 3277158..3277169
+ /locus_tag="SARI_03371"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213223"
+ misc_feature 3277347..3277376
+ /locus_tag="SARI_03371"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213223"
+ misc_feature 3277407..3277424
+ /locus_tag="SARI_03371"
+ /note="Walker B; other site"
+ /db_xref="CDD:213223"
+ misc_feature 3277431..3277442
+ /locus_tag="SARI_03371"
+ /note="D-loop; other site"
+ /db_xref="CDD:213223"
+ misc_feature 3277509..3277529
+ /locus_tag="SARI_03371"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213223"
+ gene 3277695..3278717
+ /locus_tag="SARI_03372"
+ CDS 3277695..3278717
+ /locus_tag="SARI_03372"
+ /inference="protein motif:HMMTigr:IPR005770"
+ /inference="similar to AA sequence:REFSEQ:YP_001175048.1"
+ /note="'COG: COG3221 ABC-type phosphate/phosphonate
+ transport system, periplasmic component;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572346.1"
+ /db_xref="GI:161505234"
+ /db_xref="InterPro:IPR005770"
+ /translation="MEMNYRTVAALAFTSMFSVSALLSPALAKEQEKALNFGIISTES
+ QQNLKPQWDPFLKDMEKTLGVKVNAFFAPDYAGIIQGMRFNKVDIAWYGNLSAMEAVD
+ RANGQVFAQTVAADGSPGYWSVLIVNKDSPINNLSDLIAKRKDLTFGNGDPNSTSGFL
+ VPGYYVFAKNNISTSDFKRTVNAGHETNALAVANKQVDVATNNTENLDKLKTSAPDKL
+ KELKVIWKSPLIPGDPIVWRKNLSDATKDKVYDFFMNYGKTPEEKTVLARLGWAPFRP
+ SSDLQLLPIRQLTLFKEMQSIKDNKGLSEEEKASKTSALKAQLDDLDRLTAALGAMTS
+ VTKAVQ"
+ misc_feature 3277701..3278573
+ /locus_tag="SARI_03372"
+ /note="phosphonate ABC transporter, periplasmic
+ phosphonate binding protein; Region: PhnD; TIGR03431"
+ /db_xref="CDD:132472"
+ misc_feature 3277869..3278453
+ /locus_tag="SARI_03372"
+ /note="Bacterial periplasmic transport systems use
+ membrane-bound complexes and substrate-bound,
+ membrane-associated, periplasmic binding proteins (PBPs)
+ to transport a wide variety of substrates, such as, amino
+ acids, peptides, sugars, vitamins and inorganic...;
+ Region: PBPb; cl17432"
+ /db_xref="CDD:247986"
+ misc_feature order(3277917..3277919,3278004..3278006,3278160..3278162,
+ 3278298..3278300)
+ /locus_tag="SARI_03372"
+ /note="substrate binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:238078"
+ misc_feature order(3278250..3278252,3278262..3278264,3278280..3278282)
+ /locus_tag="SARI_03372"
+ /note="membrane-bound complex binding site; other site"
+ /db_xref="CDD:238078"
+ misc_feature 3278385..3278402
+ /locus_tag="SARI_03372"
+ /note="hinge residues; other site"
+ /db_xref="CDD:238078"
+ gene 3278768..3279610
+ /locus_tag="SARI_03373"
+ CDS 3278768..3279610
+ /locus_tag="SARI_03373"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="protein motif:HMMTigr:IPR005769"
+ /inference="similar to AA sequence:REFSEQ:ZP_00730391.1"
+ /note="'KEGG: baa:BA_0884 1.1e-07
+ binding-protein-dependent transport systems inner membrane
+ component K00294;
+ COG: COG3639 ABC-type phosphate/phosphonate transport
+ system, permease component;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572347.1"
+ /db_xref="GI:161505235"
+ /db_xref="InterPro:IPR000515"
+ /db_xref="InterPro:IPR005769"
+ /translation="MAMPKRLIRPTAQTHVPVEPNMQTITVAPPKRSWFSLLSWAILL
+ AVLVVSWKGAEMAPLTLIADSGNMATFAADFFPPDFSQWQDYLSEMAVTLQIAVWGTA
+ LAVILSIPFGLMSADNIVPWWVYQPVRRLMDACRAINEMVFAMLFVVAVGLGPFAGVM
+ ALFIHTTGVLSKLLSEAVEAIEPGPVEGIRATGANKLEEILFGVLPQVLPLLISYSLY
+ RFESNVRSATVVGMVGAGGIGVTLWEAIRGFQFQQTCALMVLIIVTVSLLDFLSQRLR
+ KHFI"
+ misc_feature 3278813..3279607
+ /locus_tag="SARI_03373"
+ /note="ABC-type phosphate/phosphonate transport system,
+ permease component [Inorganic ion transport and
+ metabolism]; Region: COG3639"
+ /db_xref="CDD:226165"
+ misc_feature 3279035..3279571
+ /locus_tag="SARI_03373"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature order(3279083..3279088,3279095..3279100,3279113..3279115,
+ 3279149..3279160,3279164..3279193,3279200..3279205,
+ 3279209..3279211,3279257..3279262,3279266..3279268,
+ 3279272..3279274,3279281..3279286,3279290..3279292,
+ 3279302..3279307,3279314..3279316,3279365..3279367,
+ 3279407..3279412,3279419..3279421,3279440..3279451,
+ 3279458..3279463,3279500..3279505,3279533..3279538,
+ 3279545..3279550,3279554..3279559,3279566..3279571)
+ /locus_tag="SARI_03373"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(3279167..3279211,3279440..3279457)
+ /locus_tag="SARI_03373"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(3279209..3279211,3279242..3279244,3279458..3279460,
+ 3279494..3279496,3279503..3279505,3279533..3279535)
+ /locus_tag="SARI_03373"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(3279317..3279355,3279371..3279376,3279386..3279388)
+ /locus_tag="SARI_03373"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene 3279631..3280083
+ /locus_tag="SARI_03374"
+ CDS 3279631..3280083
+ /locus_tag="SARI_03374"
+ /inference="protein motif:HMMPfam:IPR009609"
+ /inference="protein motif:HMMPIR:IPR009609"
+ /inference="similar to AA sequence:INSD:ABP58994.1"
+ /note="'COG: COG3624 Uncharacterized enzyme of phosphonate
+ metabolism;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572348.1"
+ /db_xref="GI:161505236"
+ /db_xref="InterPro:IPR009609"
+ /translation="MHFDTTTRQRWMRALAYSDADALNTRMQALKLAPTYELIRAPET
+ GLMQIQARMGGTGSRFFAGDTTLTRAVVRLKSGTLGYSYLLGRNKPHAEQCAVIDALL
+ QEPSHFQTLMETLIAPLEAEREAQIRARAAEVNASRVDFFTLVRGDNA"
+ misc_feature 3279637..3280077
+ /locus_tag="SARI_03374"
+ /note="Phosphonate metabolism protein PhnG; Region: PhnG;
+ pfam06754"
+ /db_xref="CDD:148387"
+ gene 3280080..3280676
+ /gene="phnH"
+ /locus_tag="SARI_03375"
+ CDS 3280080..3280676
+ /gene="phnH"
+ /locus_tag="SARI_03375"
+ /inference="protein motif:HMMPfam:IPR008772"
+ /inference="similar to AA sequence:INSD:ABP58993.1"
+ /note="'COG: COG3625 Uncharacterized enzyme of phosphonate
+ metabolism;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="carbon-phosphorus lyase complex subunit"
+ /protein_id="YP_001572349.1"
+ /db_xref="GI:161505237"
+ /db_xref="InterPro:IPR008772"
+ /translation="MTRSTALQTAFNLPVQDAQQSFRRLLKAMNEPGVMVGLHQLNHG
+ WQPLNLATTSVLLTLVDGDTPVWLSPAVNNDIARQNLRFHTNAPLVEQPQQATFAVAD
+ ARISGEQLNALSAGSAVAPETSATLIVQLFALSGGRMLRLTGAGIAEERMIAPQLPDC
+ LLHELTERPHPFPLGVDLLLTCGERLLAIPRTTHVEVC"
+ misc_feature 3280089..3280673
+ /gene="phnH"
+ /locus_tag="SARI_03375"
+ /note="carbon-phosphorus lyase complex subunit; Validated;
+ Region: phnH; PRK10147"
+ /db_xref="CDD:236655"
+ gene 3280676..3281743
+ /locus_tag="SARI_03376"
+ CDS 3280676..3281743
+ /locus_tag="SARI_03376"
+ /inference="protein motif:HMMPfam:IPR008773"
+ /inference="similar to AA sequence:INSD:ABP58992.1"
+ /note="'COG: COG3626 Uncharacterized enzyme of phosphonate
+ metabolism;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572350.1"
+ /db_xref="GI:161505238"
+ /db_xref="InterPro:IPR008773"
+ /translation="MYVAVKGGEKAIANAHALQENRRRGDSAIAELSVAQIEQQMGLA
+ VDRVMTEGGIADRELAALALKQASGDNVEAIFLLRAYRTTLAKLAVSEPMNTANMRLE
+ RRISAVYKDIPGGQLLGPTYDYTHRLLDFTLLANGETPPLRTADNAPEAAPHVFSLLA
+ NQNLAKREEDNGAEPDDITRTPPVYPCSRASRLQQLMRGDEGYLLAMAYSTQRGYGRN
+ HPFAAEIRSGYVALETVAEELGFAVNVGEVLMTECEMVNGFVAPENDTPHFTRGYGLV
+ FGMSERKAMAMALVDRALQAPDYDEAVTGPAQDEEFVLAHADNVEAAGFVSHLKLPHY
+ VDFQAELELLKRLQQEAVRDH"
+ misc_feature 3280676..3281731
+ /locus_tag="SARI_03376"
+ /note="Bacterial phosphonate metabolism protein (PhnI);
+ Region: PhnI; pfam05861"
+ /db_xref="CDD:218784"
+ gene 3281733..3282581
+ /locus_tag="SARI_03377"
+ CDS 3281733..3282581
+ /locus_tag="SARI_03377"
+ /inference="protein motif:HMMPfam:IPR010306"
+ /inference="protein motif:HMMPIR:IPR010306"
+ /inference="similar to AA sequence:REFSEQ:ZP_00702082.1"
+ /note="'COG: COG3627 Uncharacterized enzyme of phosphonate
+ metabolism;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572351.1"
+ /db_xref="GI:161505239"
+ /db_xref="InterPro:IPR010306"
+ /translation="MTTNLSGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMP
+ MPYGWGTGGIQLTASVIGEADVLKVIDQGADDTTNAVSIRNFFKRVTGVATTERTEDA
+ TLIQTRHRIPETPLAEDQILIFQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYE
+ DIARFGHIATTYAYPVKVNGRYVMDPSPIPKFDNPKMDRMPALQLFGAGREKRIYAVP
+ PYTRVESLDFDDHPFRVQSWDEPCAICGSTHSYLDEVVLDDTGKRMFVCSDTDYCRQQ
+ SEALNK"
+ misc_feature 3281748..3282569
+ /locus_tag="SARI_03377"
+ /note="Phosphonate metabolism protein PhnJ; Region: PhnJ;
+ pfam06007"
+ /db_xref="CDD:218851"
+ gene 3282578..3283336
+ /gene="phnK"
+ /locus_tag="SARI_03378"
+ CDS 3282578..3283336
+ /gene="phnK"
+ /locus_tag="SARI_03378"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMPfam:IPR013563"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR012700"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:REFSEQ:ZP_00720046.1"
+ /note="'KEGG: reh:H16_B1284 7.3e-81 phnK; ABC-type
+ phosphonate transport system, ATPase component;
+ COG: COG4107 ABC-type phosphonate transport system, ATPase
+ component;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphonate C-P lyase system protein PhnK"
+ /protein_id="YP_001572352.1"
+ /db_xref="GI:161505240"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR012700"
+ /db_xref="InterPro:IPR013563"
+ /translation="MTQPLLSVNNLTHLYAPGKGFSDVSFDLWPGEVLGIVGESGSGK
+ TTLLKSISSRLTPQSGEIRYQNRSLYGMSEAERRRLLRTEWGVVHQHPLDGLRRQVSA
+ GGNIGERLMATGARHYGEIRATARRWLEEVEIPASRIDDLPTTFSGGMQQRLQIARNL
+ VTHPSLVFMDEPTGGLDVSVQARLLDLLRGLVVELDLAVVIVTHDLGVARLLADRLLV
+ MKQGQVVESGLTDRVLDDPHHPYTQLLVSSVLQN"
+ misc_feature 3282578..3283333
+ /gene="phnK"
+ /locus_tag="SARI_03378"
+ /note="phosphonate C-P lyase system protein PhnK;
+ Provisional; Region: phnK; PRK11701"
+ /db_xref="CDD:183280"
+ misc_feature 3282590..3283261
+ /gene="phnK"
+ /locus_tag="SARI_03378"
+ /note="ATP-binding cassette domain of nickel/oligopeptides
+ specific transporters; Region: ABC_NikE_OppD_transporters;
+ cd03257"
+ /db_xref="CDD:213224"
+ misc_feature 3282689..3282712
+ /gene="phnK"
+ /locus_tag="SARI_03378"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213224"
+ misc_feature order(3282698..3282703,3282707..3282715,3282845..3282847,
+ 3283085..3283090,3283187..3283189)
+ /gene="phnK"
+ /locus_tag="SARI_03378"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213224"
+ misc_feature 3282836..3282847
+ /gene="phnK"
+ /locus_tag="SARI_03378"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213224"
+ misc_feature 3283013..3283042
+ /gene="phnK"
+ /locus_tag="SARI_03378"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213224"
+ misc_feature 3283073..3283090
+ /gene="phnK"
+ /locus_tag="SARI_03378"
+ /note="Walker B; other site"
+ /db_xref="CDD:213224"
+ misc_feature 3283097..3283108
+ /gene="phnK"
+ /locus_tag="SARI_03378"
+ /note="D-loop; other site"
+ /db_xref="CDD:213224"
+ misc_feature 3283175..3283195
+ /gene="phnK"
+ /locus_tag="SARI_03378"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213224"
+ misc_feature 3283250..>3283324
+ /gene="phnK"
+ /locus_tag="SARI_03378"
+ /note="Oligopeptide/dipeptide transporter, C-terminal
+ region; Region: oligo_HPY; cl07097"
+ /db_xref="CDD:244611"
+ gene 3283444..3284124
+ /locus_tag="SARI_03379"
+ CDS 3283444..3284124
+ /locus_tag="SARI_03379"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPanther:IPR012701"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR012701"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:REFSEQ:YP_001175040.1"
+ /note="'KEGG: reh:H16_B1283 1.1e-63 phnL; ABC-type
+ phosphonate transport system, ATPase component;
+ COG: COG4778 ABC-type phosphonate transport system, ATPase
+ component;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572353.1"
+ /db_xref="GI:161505241"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR012701"
+ /translation="MIRVENVSKTFVLHQQNGARLPVLQNATLEVKNGECVVLHGHSG
+ SGKSTLLRSLFANYLPDEGHIHIRHGDEWVDLVQAPARKVLEVRRTTIGWVSQFLRVI
+ PRIPTLEVVMQPLLDLGVPREQCAAKAASLLIRLNVPERLWHLAPSTFSGGEQQRVNI
+ ARGFIVDYPILLLDEPTASLDDNNSAAVVALITEAKARGAAIVGIFHDKAVRDRVADR
+ LHPMGITA"
+ misc_feature 3283444..3284112
+ /locus_tag="SARI_03379"
+ /note="ABC-type phosphonate transport system, ATPase
+ component [Inorganic ion transport and metabolism];
+ Region: PhnL; COG4778"
+ /db_xref="CDD:227118"
+ misc_feature 3283447..3284097
+ /locus_tag="SARI_03379"
+ /note="ATP-binding cassette transporter nucleotide-binding
+ domain; Region: ABC_ATPase; cl17201"
+ /db_xref="CDD:247755"
+ misc_feature 3283564..3283587
+ /locus_tag="SARI_03379"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature order(3283573..3283578,3283582..3283590,3283732..3283734,
+ 3283963..3283968,3284062..3284064)
+ /locus_tag="SARI_03379"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213179"
+ misc_feature 3283723..3283734
+ /locus_tag="SARI_03379"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213179"
+ misc_feature 3283891..3283920
+ /locus_tag="SARI_03379"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213179"
+ misc_feature 3283951..3283968
+ /locus_tag="SARI_03379"
+ /note="Walker B; other site"
+ /db_xref="CDD:213179"
+ misc_feature 3283975..3283986
+ /locus_tag="SARI_03379"
+ /note="D-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature 3284050..3284070
+ /locus_tag="SARI_03379"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213179"
+ gene 3284121..3285257
+ /locus_tag="SARI_03380"
+ CDS 3284121..3285257
+ /locus_tag="SARI_03380"
+ /inference="protein motif:BlastProDom:IPR011550"
+ /inference="protein motif:HMMPfam:IPR006680"
+ /inference="protein motif:HMMTigr:IPR012696"
+ /inference="protein motif:superfamily:IPR011059"
+ /inference="similar to AA sequence:INSD:AAG59295.1"
+ /note="'KEGG: sto:ST2546 0.00013
+ N-acetylglucosamine-6-phosphate deacetylase K01443;
+ COG: COG3454 Metal-dependent hydrolase involved in
+ phosphonate metabolism;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572354.1"
+ /db_xref="GI:161505242"
+ /db_xref="InterPro:IPR006680"
+ /db_xref="InterPro:IPR011059"
+ /db_xref="InterPro:IPR011550"
+ /db_xref="InterPro:IPR012696"
+ /translation="MIINNVKLVLEDEVVQGSLEMQDGVIRNVADSQTRLPAALDGEG
+ GWLLPGLIELHTDNLDKFFTPRPKVDWPAHSAMSSHDALMVASGITTVLDAVAIGDVR
+ DGGDRLENLEKMINAVEETQKRGLNRAEHRLHLRCELPHPTTLPLFEKLADRDAVTLV
+ SLMDHSPGQRQYVSLEKYREYYQGKYHLTDDEMDRFEAEQRALAERWSTPNRQSIAAM
+ CQSRHIALASHDDATYAHVRESHLMGSVIAEFPTTFEAAQASRQHGMNVLMGAPNIVR
+ GGSHSGNVAAHKLAELGLLDILSSDYYPASLLDAAFRVADDANNTFTLPQAICLVTLN
+ PARALRLDDRGVIAQGKRADLVLAHHKGDHVHIDHVWRQGKRVF"
+ misc_feature 3284121..3285254
+ /locus_tag="SARI_03380"
+ /note="phosphonate metabolism protein PhnM; Provisional;
+ Region: PRK15446"
+ /db_xref="CDD:237967"
+ misc_feature 3284121..>3284288
+ /locus_tag="SARI_03380"
+ /note="Superfamily of metallo-dependent hydrolases (also
+ called amidohydrolase superfamily) is a large group of
+ proteins that show conservation in their 3-dimensional
+ fold (TIM barrel) and in details of their active site. The
+ vast majority of the members have a...; Region:
+ metallo-dependent_hydrolases; cl00281"
+ /db_xref="CDD:241750"
+ misc_feature 3284262..3285242
+ /locus_tag="SARI_03380"
+ /note="PhnM is believed to be a subunit of the membrane
+ associated C-P lyase complex. C-P lyase is thought to
+ catalyze the direct cleavage of inactivated C-P bonds to
+ yield inorganic phosphate and the corresponding
+ hydrocarbons. It is responsible for cleavage...; Region:
+ PhnM; cd01306"
+ /db_xref="CDD:238631"
+ misc_feature order(3284283..3284285,3284289..3284291,3284805..3284807,
+ 3285021..3285023)
+ /locus_tag="SARI_03380"
+ /note="active site"
+ /db_xref="CDD:238631"
+ gene 3285260..3285814
+ /locus_tag="SARI_03381"
+ CDS 3285260..3285814
+ /locus_tag="SARI_03381"
+ /inference="protein motif:HMMSmart:IPR008145"
+ /inference="protein motif:HMMTigr:IPR012699"
+ /inference="protein motif:ScanRegExp:IPR001638"
+ /inference="similar to AA sequence:REFSEQ:YP_001175038.1"
+ /note="'KEGG: rde:RD1_1528 1.7e-17 nucleoside
+ phosphorylase, C -terminal domain, putative;
+ COG: COG3709 Uncharacterized component of phosphonate
+ metabolism;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="ribose 1,5-bisphosphokinase"
+ /protein_id="YP_001572355.1"
+ /db_xref="GI:161505243"
+ /db_xref="InterPro:IPR001638"
+ /db_xref="InterPro:IPR008145"
+ /db_xref="InterPro:IPR012699"
+ /translation="MGKLIWLMGPSGSGKDSLLAELRQQEHEQLLIAHRYITRAANAG
+ NENHIALSQQEFFIRAKQNLLALSWYANGFYYGLGIEIDLWLHAGFDVVVNGSRAHLS
+ QAQARYGTSLLPVCLTVSPDILRQRLQTRGRENDAEIAARLERAAHYPPFNCHTVNND
+ GSLLQSVERLLILMGRKEEHYASL"
+ misc_feature 3285260..3285811
+ /locus_tag="SARI_03381"
+ /note="ribose 1,5-bisphosphokinase; Provisional; Region:
+ PRK10078"
+ /db_xref="CDD:236648"
+ misc_feature 3285260..3285769
+ /locus_tag="SARI_03381"
+ /note="Guanylate kinase [Nucleotide transport and
+ metabolism]; Region: Gmk; COG0194"
+ /db_xref="CDD:223272"
+ misc_feature order(3285284..3285286,3285299..3285310)
+ /locus_tag="SARI_03381"
+ /note="active site"
+ /db_xref="CDD:238977"
+ gene 3285801..3286235
+ /locus_tag="SARI_03382"
+ CDS 3285801..3286235
+ /locus_tag="SARI_03382"
+ /inference="protein motif:HMMPfam:IPR000182"
+ /inference="similar to AA sequence:REFSEQ:YP_859704.1"
+ /note="PhnO in Salmonella enterica catalyzes the
+ acetylation of a range of aminoalkylphosphonic acids; part
+ of the biochemical pathway that enables the cell to use
+ phosphonates as a phosphorus source; Escherichia coli uses
+ a different mechanism of phosphonate catabolism where PhnO
+ is not essential and seems to play a regulatory role"
+ /codon_start=1
+ /transl_table=11
+ /product="aminoalkylphosphonic acid N-acetyltransferase"
+ /protein_id="YP_001572356.1"
+ /db_xref="GI:161505244"
+ /db_xref="InterPro:IPR000182"
+ /translation="MPVCELRRATAEDTDSVYALICELKQYELNYQTLSEGFAANLQA
+ PHFRYHLALYNGEVVGMIGLHMQFHLHHANWIGEIQELVVMPQARGLKVGSKLLAWAE
+ EEARRAGAEMTELSTSIKRHDAHRFYLREGYSQSHFRFTKML"
+ misc_feature 3285912..3286199
+ /locus_tag="SARI_03382"
+ /note="ribosomal-protein-alanine acetyltransferase;
+ Region: rimI; TIGR01575"
+ /db_xref="CDD:233477"
+ misc_feature 3285951..>3286094
+ /locus_tag="SARI_03382"
+ /note="N-Acyltransferase superfamily: Various enzymes that
+ characteristically catalyze the transfer of an acyl group
+ to a substrate; Region: NAT_SF; cd04301"
+ /db_xref="CDD:173926"
+ misc_feature order(3286044..3286052,3286080..3286085)
+ /locus_tag="SARI_03382"
+ /note="Coenzyme A binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:173926"
+ gene complement(3286219..3286485)
+ /locus_tag="SARI_03384"
+ CDS complement(3286219..3286485)
+ /locus_tag="SARI_03384"
+ /inference="similar to AA sequence:INSD:AAA24355.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572357.1"
+ /db_xref="GI:161505246"
+ /translation="MIHMIMGEQKLPERSGGPAICQIVEARIDQGYGAVEFDHAATGA
+ TAKPGLHLRPTAGRAVTAVCRYALRAAGACQRNAQTHQCLTAFW"
+ gene 3286477..3287001
+ /locus_tag="SARI_03383"
+ CDS 3286477..3287001
+ /locus_tag="SARI_03383"
+ /inference="similar to AA sequence:INSD:AAG59292.1"
+ /note="'KEGG: gbe:GbCGDNIH1_1079 0.0074 metal-dependent
+ hydrolase;
+ COG: COG1235 Metal-dependent hydrolases of the
+ beta-lactamase superfamily I;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572358.1"
+ /db_xref="GI:161505245"
+ /translation="MDHVQGLFPLRWGMGASIPVYGPPDEQGCDDLFKHPGILDFTYT
+ VEPFVTFDLQGLQVTPLPLNHSKLTFGYLLESAHSRVAWLSDTAGLPDSTLKFLLNNS
+ LQVVVIDCSYEPRSVPPRNHSDLNRVIAINEMVRCPRVIVTHISHHFDTWMMANNLPD
+ GIEAGYDEMEIVLE"
+ misc_feature <3286477..3286995
+ /locus_tag="SARI_03383"
+ /note="Metallo-beta-lactamase superfamily; Region:
+ Lactamase_B; cl00446"
+ /db_xref="CDD:241867"
+ gene 3287330..3289327
+ /locus_tag="SARI_03385"
+ CDS 3287330..3289327
+ /locus_tag="SARI_03385"
+ /inference="protein motif:Gene3D:IPR011990"
+ /inference="protein motif:HMMPfam:IPR001279"
+ /inference="protein motif:superfamily:IPR008940"
+ /note="'KEGG: mtu:Rv3762c 2.7e-147 possible hydrolase;
+ COG: COG2015 Alkyl sulfatase and related hydrolases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572359.1"
+ /db_xref="GI:161505247"
+ /db_xref="InterPro:IPR001279"
+ /db_xref="InterPro:IPR008940"
+ /db_xref="InterPro:IPR011990"
+ /translation="MEIYMNNEKLFRLSRTFIAITTASGLFIHTAFAAESAKDATQYT
+ QQINQQYIKNLPFSDRQDFADAQRGFIAPLPDHGILNNTDGKPYYRADDYKFDINASA
+ PQTINPSLWRQSQLNGISGLFKVTDRMYQVRGQDISNITFIEGKTGLIVIDPLVTAGA
+ AKASLDLYYQNRPHRPIVAVIYTHSHTDHYGGVKGIVSEEEVKSGKVQIIAPEGFMEE
+ AISENVLLGNIMSRRALYSYGLLLPHTPQGNIGNGLGVTLTTGLPTIIAPTKLITKTG
+ EKMTIDGLEFEFLMAPGSEAPAEMHFYIPALKALCTAENATHTLHNFYTLRGAKTRDT
+ SKWTEYLNETLDMWGSKAEVLFMPHTWPVWGNQHINDYIGKYRDTIKYIHDQTLHLAN
+ QGYTMNEIGDMIKLPKNLENNWASRGYYGSVSHNARAVYNYYLGYYNGNPADLHPYGQ
+ VEMGKRYVKALGGSAHAINLARDAYRQGDYRWAAELLKQVIAANPGDQAAKNLQADTF
+ EQLGYQAESATWRGFYLTGAKELREGVHKFNHGTTNSPDTIKGMTVEMLFDYMAVLLD
+ SSKAAGKDISLNFNLSDGDNLNLTLENSVLNYRQSLQPKSDASFYMSRTDLHDVLTGQ
+ AKMADLVKAKKVKVIGNAVKLDEIIGCLDNFDLWVNIVTPN"
+ misc_feature 3287363..3289324
+ /locus_tag="SARI_03385"
+ /note="Alkyl sulfatase and related hydrolases [Secondary
+ metabolites biosynthesis, transport, and catabolism];
+ Region: COG2015"
+ /db_xref="CDD:224926"
+ misc_feature 3287744..3288406
+ /locus_tag="SARI_03385"
+ /note="Metallo-beta-lactamase superfamily; Region:
+ Lactamase_B; smart00849"
+ /db_xref="CDD:214854"
+ gene 3289529..3289816
+ /locus_tag="SARI_03386"
+ CDS 3289529..3289816
+ /locus_tag="SARI_03386"
+ /inference="similar to AA sequence:REFSEQ:YP_543617.1"
+ /note="'COG: NOG29453 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572360.1"
+ /db_xref="GI:161505248"
+ /translation="MYFIMQIVKSRIVMQLKKRSLLFSAVLLTGCSLPPAIPIIGAYY
+ PDWLFCIIAGVILTLVTRRILLRKYQTPPLAGVIYTALFALYSMLFWLVFF"
+ gene 3289836..3290867
+ /locus_tag="SARI_03387"
+ CDS 3289836..3290867
+ /locus_tag="SARI_03387"
+ /inference="protein motif:HMMPfam:IPR006143"
+ /inference="protein motif:HMMTigr:IPR005694"
+ /inference="protein motif:superfamily:IPR011053"
+ /inference="similar to AA sequence:INSD:AAC43176.1"
+ /note="'with MdtO and MdtP is involved in resistance to
+ puromycin, acriflavine and tetraphenylarsonium chloride'"
+ /codon_start=1
+ /transl_table=11
+ /product="multidrug resistance protein MdtN"
+ /protein_id="YP_001572361.1"
+ /db_xref="GI:161505249"
+ /db_xref="InterPro:IPR005694"
+ /db_xref="InterPro:IPR006143"
+ /db_xref="InterPro:IPR011053"
+ /translation="MESLPKKIPHNKVPALVLVLLALAVMVFVIWRVDSAPSTSDAYA
+ SADTIDVVPEVSGRIVELAVVDNQQVKKGDLLFRIDPRPYEASLAKAEASLAALDKQI
+ MLTQRSVDAQKYAASSVEATVAKARAAAKQASDTLRRTEPLLSEGFVSAEDVNRARTA
+ QRAAEADLNAVLLQAQQAASAVSGVDALVAQRVAVQADIALTKLHLEMATVRAPFDGR
+ VVSLKTSIGQFASAMKPIFTLIDTDHWYIIANFRETELKAIQAGTPAAIRLMSDSSKT
+ FQGKVDSIGFGVLPDDGGMVIGGLPRVSRSINWVRVAQRFPVKIMVEKPDASLFRIGA
+ SAVATLEPQ"
+ misc_feature 3289836..3290864
+ /locus_tag="SARI_03387"
+ /note="multidrug resistance protein MdtN; Provisional;
+ Region: PRK10476"
+ /db_xref="CDD:182488"
+ misc_feature 3289974..>3290087
+ /locus_tag="SARI_03387"
+ /note="Biotin-lipoyl like; Region: Biotin_lipoyl_2;
+ pfam13533"
+ /db_xref="CDD:205711"
+ misc_feature 3290463..3290714
+ /locus_tag="SARI_03387"
+ /note="HlyD family secretion protein; Region: HlyD_3;
+ pfam13437"
+ /db_xref="CDD:222128"
+ gene 3290867..3292891
+ /locus_tag="SARI_03388"
+ CDS 3290867..3292891
+ /locus_tag="SARI_03388"
+ /inference="protein motif:HMMPfam:IPR006726"
+ /inference="similar to AA sequence:REFSEQ:ZP_00714698.1"
+ /note="'possibly part of a tripartite efflux system
+ composed of MdtN, MdtO and MdtP which could be involved in
+ resistance to puromycin, acriflavine and
+ tetraphenylarsonium chloride'"
+ /codon_start=1
+ /transl_table=11
+ /product="multidrug efflux system protein MdtO"
+ /protein_id="YP_001572362.1"
+ /db_xref="GI:161505250"
+ /db_xref="InterPro:IPR006726"
+ /translation="MNALNYLPLSVVKLLAFFHEELSEQRPGRLTQVGQLWIGCLLVV
+ LISMTFEIPFLAISLAVLFYGVQSNAFYTKFVAILFVVATVLEIGSLFLIYKWSYSYP
+ LMRMIIASAVVLVCMFMMRTHRLGLLFFAVAIVAVYGQTFPGMLDYPEVVVRLTLWCI
+ VVGLYPTLLMVLIGVLWFPSRAVTQMRHALCARLDDAVSHLLSDVAPQAEKYIERNVL
+ ALQKLNVFCLADDADWQARSTWWQNCVSTVTYLYTTLNRYSADAASQYPALVQKIRNE
+ IASLQQAVAQGEPWQSTWSLSAQERVAARACGLETICDQLRQLGEMSPDTPPAPAARP
+ PAMTPDAFSNPVYIRYALKTLLACMICYVFYSGVDWEGIHTCMLTCIIVANPSIGSSY
+ QKMSLRFGGALCGALLALLVAIFAMPWLDNIAELLCLLAPVFLLGAWIATGSERSSYI
+ GTQMIVTFALATLENVFGPVYDLVEIRDRAMGILIGTAVSAVIYTFIWPESEADTLPQ
+ KLAGALGILGKLLRIPRQPDPTSQRTYLQLRIGCHAAFNACEEMGERVALEYQLSAKE
+ RARLLADSQAVIDLGREILYRWDTTWNSALPSDHDAQQTHAERIAQALEHYAAGLASR
+ TSRAPALDLTVSPTLPEQEQGIVRLMSCLPDWTAPEHTPAETPQQGTTPL"
+ misc_feature 3290867..3292885
+ /locus_tag="SARI_03388"
+ /note="multidrug efflux system protein MdtO; Provisional;
+ Region: PRK11427"
+ /db_xref="CDD:183131"
+ misc_feature 3291944..3292345
+ /locus_tag="SARI_03388"
+ /note="Fusaric acid resistance protein-like; Region:
+ FUSC_2; pfam13515"
+ /db_xref="CDD:222189"
+ gene 3292888..3294327
+ /locus_tag="SARI_03389"
+ CDS 3292888..3294327
+ /locus_tag="SARI_03389"
+ /inference="protein motif:HMMPfam:IPR003423"
+ /inference="protein motif:HMMTigr:IPR010131"
+ /inference="similar to AA sequence:INSD:ABJ03566.1"
+ /note="'part of a multidrug efflux system involved in
+ resistance to acriflavin, puromycin, erytjhromycin and
+ tetraphenylarsonium chloride; member of the outer membrane
+ factor (OMF) family'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative outer membrane efflux protein MdtP"
+ /protein_id="YP_001572363.1"
+ /db_xref="GI:161505251"
+ /db_xref="InterPro:IPR003423"
+ /db_xref="InterPro:IPR010131"
+ /translation="MIRTSSRLLLCCLLGSATALSGCALIREDTAAHQQLQPENSQLA
+ NDIHLASSGWPQAQWWRQFNDPQLNALIQQTLSGSHTLAEAKLREKKSQSQAELLEAG
+ SQLQVAALGMLNRQRASANGFLGPYALDAPKLGMDGPYYTEATIGLFAGIDLDFWGVH
+ RSAVAAAIGAQNAALAETAAVELSLTTGVAQLYYSMQASYQMLDLLQQTRDVVDYAIQ
+ AHQSKVAHGLEAKVPYHGARAQMLAVDKQIAAVKGQIKETRESLRALMGVEAMPDIKS
+ ASLPQVNTGIPSTLSYELLARRPDLQAMRWYVQASLNQVDAARALFYPSFDIKAFFGL
+ DSIHLDSLFKNTSKQINFIPGLRLPLFDGGRLNANLASTRAASNILIERYNQSVLNAV
+ RDVAINGARLQTLNDERDMQVQRVDATRYTQASAEAALKQGLGSRLQATEARLPVLSE
+ QVSLLMLDTQRIIQSIQLIKSLGGGYQAA"
+ misc_feature 3292951..3294324
+ /locus_tag="SARI_03389"
+ /note="putative outer membrane efflux protein MdtP;
+ Provisional; Region: PRK09915"
+ /db_xref="CDD:182142"
+ gene complement(3294333..3294458)
+ /locus_tag="SARI_03390"
+ CDS complement(3294333..3294458)
+ /locus_tag="SARI_03390"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572364.1"
+ /db_xref="GI:161505252"
+ /translation="MHVLCHFFSGGLTLILRANFVQNPDEKQAVVSFDVSKENAT"
+ gene 3294509..3296656
+ /locus_tag="SARI_03391"
+ /note="Pseudogene based on alignment with
+ gi|16767535|ref|NP_463150.1|"
+ gene 3296841..3297530
+ /locus_tag="SARI_03392"
+ CDS 3296841..3297530
+ /locus_tag="SARI_03392"
+ /inference="protein motif:Gene3D:IPR011990"
+ /inference="protein motif:HMMPfam:IPR006597"
+ /inference="protein motif:HMMSmart:IPR006597"
+ /inference="protein motif:superfamily:IPR008940"
+ /inference="similar to AA sequence:INSD:CAD09269.1"
+ /note="'KEGG: eci:UTI89_C1133 6.1e-15 hypothetical
+ protein;
+ COG: COG0790 FOG: TPR repeat, SEL1 subfamily;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572365.1"
+ /db_xref="GI:161505253"
+ /db_xref="InterPro:IPR006597"
+ /db_xref="InterPro:IPR008940"
+ /db_xref="InterPro:IPR011990"
+ /translation="MKQLLALMFLITFFAHAAAPEPGSQYLKAAEDGDRRAQYYLADS
+ WFSSGDLGKAEYWAQKAADNGDADACALLAQIKITNPVSLDYPGAKRLAEKAAKAGSK
+ AGEITLARVLVNAQAGRPDYPKAISLLQNASEDLDNDSAVDAQMLLGLIYANGAGIAG
+ DDEKAAWYFKRSSAISRTGYSEYWAGMMFLNGEPGFIEKNKQKALHWLNLSCLEGFDT
+ GCEEFEALTNG"
+ misc_feature 3296850..3297527
+ /locus_tag="SARI_03392"
+ /note="FOG: TPR repeat, SEL1 subfamily [General function
+ prediction only]; Region: COG0790"
+ /db_xref="CDD:223861"
+ misc_feature 3297264..3297362
+ /locus_tag="SARI_03392"
+ /note="Sel1-like repeats; Region: SEL1; smart00671"
+ /db_xref="CDD:214772"
+ gene complement(3297586..3298941)
+ /gene="gltP"
+ /locus_tag="SARI_03393"
+ CDS complement(3297586..3298941)
+ /gene="gltP"
+ /locus_tag="SARI_03393"
+ /inference="protein motif:HMMPfam:IPR001991"
+ /inference="protein motif:ScanRegExp:IPR001991"
+ /inference="similar to AA sequence:INSD:AAL23107.1"
+ /note="'carrier protein part of the Na(+)-independent,
+ binding-protein-independent glutamate-aspartate transport
+ system'"
+ /codon_start=1
+ /transl_table=11
+ /product="glutamate/aspartate:proton symporter"
+ /protein_id="YP_001572366.1"
+ /db_xref="GI:161505254"
+ /db_xref="InterPro:IPR001991"
+ /translation="MLLTESNASSRKSVVMKNLKVSLAWQILLAMVLGILLGSYLHYH
+ SDSREWLIANLLSPAGDIFIHLIKMIVVPIVISTLIVGIAGVGDAKQLGRIGAKTILY
+ FELITTVAIILGITLANVFQPGSGIDMSQLATVDISKYQNTTAEVQSHAHGLMGTILS
+ LVPTNIIASMAKGDMLPIIFFSVLFGLGLSSLPATHREPLVTVFRSISETMFKVTHMV
+ MRYAPVGVFALIAVTVANFGFASLWPLAKLVLLVHFAIIFFALVVLGIVARLCGLSIW
+ ILIRILKDELILAYSTASSESVLPRIIEKMEAYGAPASITSFVVPTGYSFNLDGSTLY
+ QSIAAIFIAQLYGIDLSLWQEIVLVLTLMVTSKGIAGVPGVSFVVLLATLGSVGIPLE
+ GLAFIAGVDRILDMARTALNVVGNALAVLVISKWEHKFDRKKALAYEREMLGKFDKTA
+ Q"
+ misc_feature complement(3297589..3298896)
+ /gene="gltP"
+ /locus_tag="SARI_03393"
+ /note="glutamate/aspartate:proton symporter; Provisional;
+ Region: gltP; PRK11283"
+ /db_xref="CDD:183075"
+ misc_feature complement(3297634..3298896)
+ /gene="gltP"
+ /locus_tag="SARI_03393"
+ /note="Na+/H+-dicarboxylate symporters [Energy production
+ and conversion]; Region: GltP; COG1301"
+ /db_xref="CDD:224220"
+ gene complement(3299241..3299861)
+ /locus_tag="SARI_03394"
+ CDS complement(3299241..3299861)
+ /locus_tag="SARI_03394"
+ /inference="protein motif:Gene3D:IPR011990"
+ /inference="protein motif:HMMPfam:IPR001440"
+ /inference="protein motif:HMMSmart:IPR013026"
+ /inference="similar to AA sequence:REFSEQ:NP_463147.1"
+ /note="'COG: COG4235 Cytochrome c biogenesis factor;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="formate-dependent nitrite reductase complex
+ subunit NrfG"
+ /protein_id="YP_001572367.1"
+ /db_xref="GI:161505255"
+ /db_xref="InterPro:IPR001440"
+ /db_xref="InterPro:IPR011990"
+ /db_xref="InterPro:IPR013026"
+ /translation="MSLPANVTTPLRPLPVKRLAAASVLMVAACVGGYMLTPKWQAVR
+ SEHQRLADPLRDFTNPQTPEAQLSRLQEKIRANPQDSEQWARLGEYYLYRNAYDNALL
+ AYRQALRLRGDNAQLFAALATVLYYQSGQHMTPATREMINKALALDAAEVTAQMLLAA
+ DAFMQADYARAVSLWQTLLDANSPRVNRAQLVEAINLAKLLQNLQK"
+ misc_feature complement(3299244..3299834)
+ /locus_tag="SARI_03394"
+ /note="formate-dependent nitrite reductase complex subunit
+ NrfG; Provisional; Region: PRK10370"
+ /db_xref="CDD:182415"
+ gene complement(3299897..3302048)
+ /locus_tag="SARI_03395"
+ /note="Pseudogene compared to gi|16767531|ref|NP_463146.1|
+ formate-dependent nitrite reductase [Salmonella
+ typhimurium LT2]"
+ gene complement(3302041..3302997)
+ /locus_tag="SARI_03396"
+ CDS complement(3302041..3302997)
+ /locus_tag="SARI_03396"
+ /inference="protein motif:HMMPfam:IPR005614"
+ /inference="similar to AA sequence:INSD:AAX68065.1"
+ /note="'KEGG: pai:PAE2861 1.2e-18 molybdopterin
+ oxidoreductase, membrane subunit K00185;
+ COG: COG3301 Formate-dependent nitrite reductase, membrane
+ component;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572368.1"
+ /db_xref="GI:161505256"
+ /db_xref="InterPro:IPR005614"
+ /translation="MTPASAFHFASLVWDWPIAIYLFLIGISAGLVTLAILLRRFHPE
+ AGGSDSTLLRTTLVLGPGAIIFGLLILVFHLTRPWTFWKLMFHYSFTSVMSMGVMLFQ
+ LYMVVLVLWLAKIFEKEVIALQQRWLPRLGLVQSVLTLLTPLHRALETLMLVLAVLLG
+ AYTGFLLSALKSYPFLNNPILPALFLFSGISSGAAVALIVMALRHRSNPHSTEARFVH
+ RMETPVVWLEIFLLAAFFIGLALGDDGKMRALAAAQGGGFWSWWFWLGVVGLGLIIPL
+ LLKPWANRSVKFHGVLAVCGASLTGVLLLRFFILYAGQLTVA"
+ misc_feature complement(3302044..3302997)
+ /locus_tag="SARI_03396"
+ /note="Formate-dependent nitrite reductase, membrane
+ component [Inorganic ion transport and metabolism];
+ Region: NrfD; COG3301"
+ /db_xref="CDD:225838"
+ misc_feature complement(3302044..3302985)
+ /locus_tag="SARI_03396"
+ /note="cytochrome c nitrite reductase, NrfD subunit;
+ Region: cyt_nit_nrfD; TIGR03148"
+ /db_xref="CDD:234121"
+ gene complement(3302994..3303665)
+ /locus_tag="SARI_03397"
+ CDS complement(3302994..3303665)
+ /locus_tag="SARI_03397"
+ /inference="protein motif:HMMPfam:IPR001450"
+ /inference="protein motif:ScanRegExp:IPR001450"
+ /inference="similar to AA sequence:REFSEQ:YP_153152.1"
+ /note="'KEGG: vfi:VF1552 4.8e-77 THIosulfate reductase
+ electron transport subunit K04014;
+ COG: COG0437 Fe-S-cluster-containing hydrogenase
+ components 1;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572369.1"
+ /db_xref="GI:161505257"
+ /db_xref="InterPro:IPR001450"
+ /translation="MSCTRRQFITRVGALAAVSGMAGRVVANTLNINGVRYGMVHDES
+ LCIGCTACMDTCREVNQVPEGVSRLTIIRSEPLGTFPEVKYRFFRHSCQHCDHAPCVD
+ VCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVSKTADKCDFCRKTRL
+ KEGRLPACVESCPTKALTFGNLDDPDSEISRLLREKPTYRYKLALGTKPKVYRVPFNY
+ GEVSQ"
+ misc_feature complement(3302997..3303662)
+ /locus_tag="SARI_03397"
+ /note="cytochrome c nitrite reductase, Fe-S protein;
+ Region: cyt_nit_nrfC; TIGR03149"
+ /db_xref="CDD:234122"
+ gene complement(3303662..3304228)
+ /locus_tag="SARI_03398"
+ CDS complement(3303662..3304228)
+ /locus_tag="SARI_03398"
+ /inference="similar to AA sequence:REFSEQ:NP_463143.2"
+ /note="'part of nitrite reductase complex; NrfB is active
+ at high nitrate conditions; NrfA, B, C, and D are
+ essential for the formate-dependent nitrite reduction to
+ ammonia'"
+ /codon_start=1
+ /transl_table=11
+ /product="cytochrome c nitrite reductase pentaheme
+ subunit"
+ /protein_id="YP_001572370.1"
+ /db_xref="GI:161505258"
+ /translation="MSVLRSLLTAGVLASGLFWSLNGITAAPAAQQPEQRWTVTQQRN
+ PDAACLDCHKPDTEGMHGKHTGAINPNNKLPVTCTNCHGQPSLHHREGVKDVMRFNDP
+ MYTLEQQNSVCMSCHLPEQLQKAFWPHDVHVTKVTCASCHSLHPQQDTMQTLSEKGRI
+ KICVDCHSDQRTNPHFNPASVPLLKEQP"
+ misc_feature complement(3303671..3304219)
+ /locus_tag="SARI_03398"
+ /note="cytochrome c nitrite reductase pentaheme subunit;
+ Provisional; Region: PRK11659"
+ /db_xref="CDD:183264"
+ gene complement(3304273..3305709)
+ /gene="nrfA"
+ /locus_tag="SARI_03399"
+ CDS complement(3304273..3305709)
+ /gene="nrfA"
+ /locus_tag="SARI_03399"
+ /inference="protein motif:Gene3D:IPR012282"
+ /inference="protein motif:HMMPfam:IPR003321"
+ /inference="similar to AA sequence:INSD:CAD09261.1"
+ /note="catalyzes the formate-dependent reduction of
+ nitrite to ammonia; cytochrome C552"
+ /codon_start=1
+ /transl_table=11
+ /product="cytochrome c552"
+ /protein_id="YP_001572371.1"
+ /db_xref="GI:161505259"
+ /db_xref="InterPro:IPR003321"
+ /db_xref="InterPro:IPR012282"
+ /translation="MARKTLRARRFFSLIFPFFFMTSVYAEQTSVSAKTVTVEAKNET
+ FSPQHPDQYQSWKATSEQSAREDALAEDPRLVILWAGYPFSRDYNKPRGHAYAVTDVR
+ ETLRTGAPKTAEEGPLPMACWSCKSPDVARLIQQEGEDGYFHGKWARGGPEIVNDLGC
+ ADCHNTASDDFAQGKPALTLSRPYAERAMEAIGKPFDKAGRFDQQSMVCGQCHVEYYF
+ EGKNKAVKFPWDEGMKVENMEKYYDAIAFSDWTNSLSKTPMLKAQHPEYETWSAGIHG
+ KNNVTCIDCHMPKVQNAEGKLYTDHKIGNPFDNFAQTCANCHTQDKASLQKVVAERKQ
+ AIHDLKIKVEDQLVHAHFEAKAAWDAGATDAEMKPILNDIRHAQWRWDLAIASHGIHM
+ HAPEEGLRMLGSAMDKAADARTKLARLLATKGITHEIPLPDISTKEKAQKAIGLNMQQ
+ INAEKQDFLKTVVPQWEDQARKNGLLSQ"
+ misc_feature complement(3304276..3305700)
+ /gene="nrfA"
+ /locus_tag="SARI_03399"
+ /note="cytochrome c nitrite reductase subunit c552;
+ Provisional; Region: nrfA; PRK11125"
+ /db_xref="CDD:236854"
+ gene 3306140..3308098
+ /locus_tag="SARI_03400"
+ CDS 3306140..3308098
+ /locus_tag="SARI_03400"
+ /inference="protein motif:HMMPfam:IPR000873"
+ /inference="protein motif:HMMTigr:IPR011904"
+ /inference="protein motif:ScanRegExp:IPR000873"
+ /inference="protein motif:ScanRegExp:IPR002048"
+ /note="Acs; catalyzes the conversion of acetate and CoA to
+ acetyl-CoA"
+ /codon_start=1
+ /transl_table=11
+ /product="acetyl-CoA synthetase"
+ /protein_id="YP_001572372.1"
+ /db_xref="GI:161505260"
+ /db_xref="InterPro:IPR000873"
+ /db_xref="InterPro:IPR002048"
+ /db_xref="InterPro:IPR011904"
+ /translation="MSQTHKHAIPANVADRCLINPEQYEAKYQQSINDPDTFWGEQGK
+ ILDWITPYQKVKNTSFAPGNVSIKWYEDGTLNLAANCLDRHLQENGDRTAIIWEGDDA
+ SQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHS
+ VIFGGFSPEAVAGRIIDSNSRLVITADEGIRAGRSIPLKKNVDDALKNPNVTSVEHVI
+ VLKRTGSDIDWQEDRDLWWRDLIEKASPEHQPEAMNAEDPLFILYTSGSTGKPKGVLH
+ TTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVP
+ NWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINP
+ EAWEWFWKKIGNEKCPVVDTWWQTETGGFMITPLPGATELKAGSATRPFFGVQPALVD
+ NEGHPQEGATEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDG
+ YYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIAEAAVVGIPHAIKGQAIYAYVTLN
+ HGEEPSPELYAEVRNWVRKEIGPLATPDVLHWTDSLPKTRSGKIMRRILRKIAAGDTS
+ NLGDTSTLADPGVVEKLLEEKQAIAMPS"
+ misc_feature 3306155..3308086
+ /locus_tag="SARI_03400"
+ /note="acetyl-CoA synthetase; Provisional; Region:
+ PRK00174"
+ /db_xref="CDD:234677"
+ misc_feature 3306221..3308041
+ /locus_tag="SARI_03400"
+ /note="Acetyl-CoA synthetase (also known as acetate-CoA
+ ligase and acetyl-activating enzyme); Region: ACS;
+ cd05966"
+ /db_xref="CDD:213313"
+ misc_feature order(3306626..3306634,3306710..3306712,3306719..3306721,
+ 3306725..3306727,3307052..3307054,3307067..3307072,
+ 3307136..3307144,3307214..3307219,3307226..3307228,
+ 3307295..3307306,3307370..3307387,3307637..3307639,
+ 3307673..3307675,3307682..3307684,3307706..3307717,
+ 3307889..3307891,3307904..3307909)
+ /locus_tag="SARI_03400"
+ /note="active site"
+ /db_xref="CDD:213313"
+ misc_feature order(3306626..3306634,3306710..3306712,3306719..3306721,
+ 3306725..3306727,3307052..3307054,3307070..3307072,
+ 3307136..3307144,3307214..3307219,3307226..3307228,
+ 3307706..3307714,3307889..3307891,3307904..3307906)
+ /locus_tag="SARI_03400"
+ /note="CoA binding site [chemical binding]; other site"
+ /db_xref="CDD:213313"
+ misc_feature order(3306920..3306922,3306929..3306946,3306950..3306955)
+ /locus_tag="SARI_03400"
+ /note="acyl-activating enzyme (AAE) consensus motif; other
+ site"
+ /db_xref="CDD:213313"
+ misc_feature order(3307067..3307072,3307295..3307306,3307370..3307387,
+ 3307637..3307639,3307673..3307675,3307682..3307684,
+ 3307715..3307717)
+ /locus_tag="SARI_03400"
+ /note="AMP binding site [chemical binding]; other site"
+ /db_xref="CDD:213313"
+ misc_feature order(3307067..3307072,3307295..3307300,3307379..3307381)
+ /locus_tag="SARI_03400"
+ /note="acetate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:213313"
+ gene 3308337..3308651
+ /locus_tag="SARI_03401"
+ CDS 3308337..3308651
+ /locus_tag="SARI_03401"
+ /inference="protein motif:HMMPfam:IPR007436"
+ /inference="similar to AA sequence:INSD:CAD09258.1"
+ /note="'COG: COG3162 Predicted membrane protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572373.1"
+ /db_xref="GI:161505261"
+ /db_xref="InterPro:IPR007436"
+ /translation="MNDTIYQRIEDSARFRELVEKRQRFATILSVIMLAVYISFILLI
+ AFAPGWLGTPLHAGTSVTRGIPIGVGVIVISFVLTGIYIWRANGEFDRLNNAVLHEVK
+ AL"
+ misc_feature 3308337..3308645
+ /locus_tag="SARI_03401"
+ /note="Predicted membrane protein [Function unknown];
+ Region: COG3162"
+ /db_xref="CDD:225704"
+ gene 3308648..3310297
+ /gene="actP"
+ /locus_tag="SARI_03402"
+ CDS 3308648..3310297
+ /gene="actP"
+ /locus_tag="SARI_03402"
+ /inference="protein motif:HMMPanther:IPR001734"
+ /inference="protein motif:HMMPfam:IPR001734"
+ /inference="protein motif:HMMTigr:IPR001734"
+ /inference="protein motif:ScanRegExp:IPR001734"
+ /inference="similar to AA sequence:INSD:AAV79835.1"
+ /note="member of the sodium:solute symporter family;
+ cotranscribed with the acs gene which encodes acetyl
+ coenzyme A synthase; mutations affect acetate uptake"
+ /codon_start=1
+ /transl_table=11
+ /product="acetate permease"
+ /protein_id="YP_001572374.1"
+ /db_xref="GI:161505262"
+ /db_xref="InterPro:IPR001734"
+ /translation="MKRVLTALAAALPFAAHAADAISGAVERQPTNWQAIIMFLIFVV
+ FTLGITYWASKRVRSRSDYYTAGGNITGFQNGLAIAGDYMSAASFLGISALVFTSGYD
+ GLIYSLGFLVGWPIILFLIAERLRNLGRYTFADVASYRLKQGPIRILSACGSLVVVAL
+ YLIAQMVGAGKLIELLFGLNYHIAVVLVGVLMMMYVLFGGMLATTWVQIIKAVLLLFG
+ ASFMAFMVMKHVGFSFNNLFTEAMAVHPKGTAIMSPGGLVQDPISALSLGLGLMFGTA
+ GLPHILMRFFTVSDAREARKSVFYATGFMGYFYILTFIIGFGAIMLVGANPAYKDAAG
+ ALIGGNNMAAVHLANAVGGNLFLGFISAVAFATILAVVAGLTLAGASAVSHDLYANVF
+ RKGATEREELKVSKITVLVLGVIAIILGVLFENQNIAFMVGLAFAIAASCNFPIILLS
+ MYWSKLTTRGAMLGGWLGLLTAVVLMILGPTIWVQILGHEKAIFPYEYPALFSISVAF
+ LGIWFFSATDNSAEGNREREQFRAQFIRSQTGFGVEQGRAH"
+ misc_feature 3308729..3310270
+ /gene="actP"
+ /locus_tag="SARI_03402"
+ /note="Predicted symporter [General function prediction
+ only]; Region: DhlC; COG4147"
+ /db_xref="CDD:226627"
+ misc_feature 3308753..3310192
+ /gene="actP"
+ /locus_tag="SARI_03402"
+ /note="Uncharacterized bacterial solute carrier 5
+ subfamily; putative solute-binding domain; Region:
+ SLC5sbd_u4; cd11480"
+ /db_xref="CDD:212050"
+ misc_feature order(3308888..3308890,3308897..3308899,3309746..3309748,
+ 3309755..3309760)
+ /gene="actP"
+ /locus_tag="SARI_03402"
+ /note="Na binding site [ion binding]; other site"
+ /db_xref="CDD:212050"
+ gene complement(3310336..3311025)
+ /locus_tag="SARI_03403"
+ CDS complement(3310336..3311025)
+ /locus_tag="SARI_03403"
+ /inference="protein motif:HMMPfam:IPR007300"
+ /inference="similar to AA sequence:INSD:AAL23096.1"
+ /note="'KEGG: bcz:BCZK3376 1.8e-36 murein hydrolase export
+ regulator K01238;
+ COG: COG1346 Putative effector of murein hydrolase;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572375.1"
+ /db_xref="GI:161505263"
+ /db_xref="InterPro:IPR007300"
+ /translation="MSNFQLSVLCLIITLGIYSANKRLYRRFRKLPLMPLVLTPALLV
+ LMLVFGHISWQNYIGESHWLLWLLGPATIAFAVPVYDNLAIIKRHWMSLTAGVVTATV
+ VAVTSSVWLARLFTLSDEIQRSLAVRSVTTPFALAAAEPLGGQPDLVALFVVVTGVFG
+ MAVGDALFLRLSIREGMAKGAGFGAASHGAGTARSYELGQQEGVVASLVMMLSGVVMV
+ LAAPLVAMVMF"
+ misc_feature complement(3310417..3311025)
+ /locus_tag="SARI_03403"
+ /note="Putative effector of murein hydrolase [Cell
+ envelope biogenesis, outer membrane]; Region: LrgB;
+ COG1346"
+ /db_xref="CDD:224265"
+ gene complement(3311018..3311428)
+ /locus_tag="SARI_03405"
+ CDS complement(3311018..3311428)
+ /locus_tag="SARI_03405"
+ /inference="protein motif:BlastProDom:IPR005538"
+ /inference="protein motif:HMMPfam:IPR005538"
+ /inference="similar to AA sequence:INSD:AAL23095.1"
+ /note="'KEGG: btk:BT9727_3424 2.1e-12 murein hydrolase
+ exporter K06518;
+ COG: COG1380 Putative effector of murein hydrolase LrgA;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572376.2"
+ /db_xref="GI:448236274"
+ /db_xref="InterPro:IPR005538"
+ /translation="MAVAISRVTPAVVQRLQVPVQVLLYAGLFIFSQYLVSWLHLPLP
+ ANLVGMVLMLALIVCRIIPLSWVRAGARWLLAEMLLFFIPAVVAVVNYAHLLLVDGWR
+ IFSVIAISTLMVLGATAWVVDKVYRYEMSRLNRE"
+ misc_feature complement(3311021..3311356)
+ /locus_tag="SARI_03405"
+ /note="Putative effector of murein hydrolase LrgA [General
+ function prediction only]; Region: COG1380"
+ /db_xref="CDD:224298"
+ gene 3311532..3312416
+ /locus_tag="SARI_03404"
+ CDS 3311532..3312416
+ /locus_tag="SARI_03404"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="protein motif:HMMPfam:IPR005119"
+ /inference="similar to AA sequence:REFSEQ:NP_458568.1"
+ /note="'KEGG: shn:Shewana3_3435 1.3e-58 transcriptional
+ regulator, LysR family K06022;
+ COG: COG0583 Transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572377.1"
+ /db_xref="GI:161505264"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR005119"
+ /db_xref="InterPro:IPR011991"
+ /translation="MDIRTLRYFVEVVRQQSFTRAAEKLFVTQPTISKMLKNLEDELN
+ CTLLIRDGRKLLLTDTGRVVFERGLAILAEFRQLEAELSDINHLNKGVLRLGIPPMVG
+ MLMAGPISLFRQRYPGVELKISEFGGLTVQQAVMNGELDVAMTALPVEEASGLTTLSL
+ FSHPLCVLVPRSGQWTTCDAIAPEALAEHPLLIYNEDFALSRQLMTLFSQHDVKPRIA
+ VRSGQWDFLAAMVQAGVGIAILPEPICQRLDKATLRWLPLESVLRWQLGMIWREGVYL
+ SHSARAWLTCCEGFWLKS"
+ misc_feature 3311532..3312383
+ /locus_tag="SARI_03404"
+ /note="Transcriptional regulator [Transcription]; Region:
+ LysR; COG0583"
+ /db_xref="CDD:223656"
+ misc_feature 3311538..3311717
+ /locus_tag="SARI_03404"
+ /note="Bacterial regulatory helix-turn-helix protein, lysR
+ family; Region: HTH_1; pfam00126"
+ /db_xref="CDD:215735"
+ misc_feature 3311805..3312392
+ /locus_tag="SARI_03404"
+ /note="The C-terminal substrate binding domain of
+ LysR-like transcriptional regulator CidR, contains the
+ type 2 periplasmic binding fold; Region: PBP2_CidR;
+ cd08438"
+ /db_xref="CDD:176129"
+ misc_feature order(3311847..3311852,3311856..3311861,3311868..3311870,
+ 3311880..3311882,3311886..3311906,3312183..3312200,
+ 3312216..3312221,3312225..3312230)
+ /locus_tag="SARI_03404"
+ /note="putative dimerization interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:176129"
+ gene complement(3312463..3314154)
+ /locus_tag="SARI_03406"
+ CDS complement(3312463..3314154)
+ /locus_tag="SARI_03406"
+ /inference="protein motif:HMMPfam:IPR006153"
+ /inference="protein motif:HMMTigr:IPR004705"
+ /inference="similar to AA sequence:INSD:CAD09253.1"
+ /note="'COG: COG0025 NhaP-type Na+/H+ and K+/H+
+ antiporters;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572378.1"
+ /db_xref="GI:161505266"
+ /db_xref="InterPro:IPR004705"
+ /db_xref="InterPro:IPR006153"
+ /translation="MMPLSIIKNIANRERMEIFFTILIMTLVVSLSGVFTRVLPFQLP
+ LPLMQIAAGALLAWPTFGLHVEFDPELFLVLFIPPLLFADGWKTPTREFLEHGREIFG
+ LALALVLVTVVGIGFLIYWLVPGIPLIPAFALAAVLSPTDAVALSGIVGEGRIPKKIM
+ GILQGEALMNDASGLVSLKFAVAVAMGTMVFTVGGATLEFFKVAIGGILAGFVVSWLY
+ GRSLRFLSRWGGDEPATQIVLLFLLPFASYLIAEHVGLSGILAAVAAGMTITRSGVMR
+ RAPLAMRLRANSTWAMLEFVFNGMVFLLLGLQLPGILESSLAAAEADPNVETWMLFTD
+ IVLIYAALMLVRFGWLWTMKKFSLRFLKKKPMEFATWTSREILIASFAGVRGAITLAG
+ VLSIPLLLPNGSGFPARYELVFLAAGVILFSLFVGVVMLPLLLQHLEVADHAQQLKEE
+ RIARAATAEAAIVTIQKMEERLAADTEENIDNQLLTEVSSRVIGNLRRRADGRNDVES
+ SIQEENLERRFRLAALRSERAELYHLRATREISNETLQKLLHDLDLMEALLIENQ"
+ misc_feature complement(3312514..3314091)
+ /locus_tag="SARI_03406"
+ /note="Na+/H+ antiporter, bacterial form; Region: a_cpa1;
+ TIGR00831"
+ /db_xref="CDD:129911"
+ misc_feature complement(<3313339..>3313815)
+ /locus_tag="SARI_03406"
+ /note="Kef-type K+ transport systems, membrane components
+ [Inorganic ion transport and metabolism]; Region: KefB;
+ cl10482"
+ /db_xref="CDD:245312"
+ gene complement(3314259..3315617)
+ /locus_tag="SARI_03407"
+ CDS complement(3314259..3315617)
+ /locus_tag="SARI_03407"
+ /inference="protein motif:HMMPfam:IPR006043"
+ /inference="similar to AA sequence:INSD:AAL23092.1"
+ /note="'KEGG: bcz:BCZK0244 8.7e-62 guanine-hypoxanTHIne
+ permease; xanTHIne/uracil permease family protein K06901;
+ COG: COG2252 Permeases;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572379.1"
+ /db_xref="GI:161505267"
+ /db_xref="InterPro:IPR006043"
+ /translation="MFSMSTPSARTGGSLDAWFKISQRGSTVRQEVVAGLTTFLAMVY
+ SVIVVPGMLGKAGFPPAAVFVATCLVAGVGSIVMGLWANLPLAIGCAISLTAFTAFSL
+ VLGQQISVPVALGAVFLMGVLFTIISATGIRSWILRNLPQGVAHGTGIGIGLFLLLIA
+ ANGVGLVIKNPLDGLPVALGDFDTFPVIMSLVGLAVILGLEKLKVPGGILLTIIGISI
+ VGLLFDPGVHFSGIFAMPSLSDENGNSLIGSLDIMGALNPVVLPSVLALVMTAVFDAT
+ GTIRAVAGQANLLDKDGQIIDGGKALTTDSLSSVFSGLVGAAPAAVYIESAAGTAAGG
+ KTGLTAITVGVLFLLILFLSPLSYLVPVYATAPALMYVGLLMLSNVAKIDFADFVDAM
+ AGLVTAVFIVLTCNIVTGIMIGFATLVVGRVVSGEWRKLNIGTVVIAVALVAFYAGGW
+ AI"
+ misc_feature complement(3314268..3315584)
+ /locus_tag="SARI_03407"
+ /note="Xanthine/uracil/vitamin C permease [Nucleotide
+ transport and metabolism]; Region: COG2252"
+ /db_xref="CDD:225161"
+ gene complement(3315696..3315869)
+ /locus_tag="SARI_03409"
+ CDS complement(3315696..3315869)
+ /locus_tag="SARI_03409"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572380.1"
+ /db_xref="GI:161505269"
+ /translation="MRIVWRFIEHNKKKSIKSGKVQLKKRLRSLDNRLLFFATRFVCV
+ ELNVCFFAAPRLS"
+ gene 3315840..3315971
+ /locus_tag="SARI_03408"
+ CDS 3315840..3315971
+ /locus_tag="SARI_03408"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572381.1"
+ /db_xref="GI:161505268"
+ /translation="MLNKSPDDAQPLSSLRNPATIFRIAVSKFVAQTAHKNVIIHRG"
+ gene complement(3315961..3316625)
+ /locus_tag="SARI_03410"
+ /note="Pseudogene compared to gi|16767517|ref|NP_463132.1|
+ putative glutaTHIone S-transferase [Salmonella typhimurium
+ LT2]"
+ gene complement(3316931..3317389)
+ /locus_tag="SARI_03411"
+ CDS complement(3316931..3317389)
+ /locus_tag="SARI_03411"
+ /inference="protein motif:HMMPfam:IPR000551"
+ /inference="protein motif:HMMSmart:IPR000551"
+ /inference="protein motif:HMMTigr:IPR010211"
+ /inference="protein motif:ScanRegExp:IPR000551"
+ /inference="protein motif:superfamily:IPR009061"
+ /inference="similar to AA sequence:INSD:AAV79828.1"
+ /note="'COG: COG0789 Predicted transcriptional regulators;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572382.1"
+ /db_xref="GI:161505270"
+ /db_xref="InterPro:IPR000551"
+ /db_xref="InterPro:IPR009061"
+ /db_xref="InterPro:IPR010211"
+ /translation="MEKKSPRLKALLTPGDVAKRSGVAVSALHFYESKGLITSIRNSG
+ NQRRYKRDVLRYVAIIKIAQRIGIPLATIGEAFGILPEGHTLSAKEWRQLSSQWREEL
+ DRRIHTLVALRDELDGCIGCGCLSRSDCPLRNPGDRLGEQGTGARLLEDD"
+ misc_feature complement(3316934..3317389)
+ /locus_tag="SARI_03411"
+ /note="redox-sensitivie transcriptional activator SoxR;
+ Provisional; Region: PRK15002"
+ /db_xref="CDD:184964"
+ misc_feature complement(3316943..3317359)
+ /locus_tag="SARI_03411"
+ /note="Helix-Turn-Helix DNA binding domain of the SoxR
+ transcription regulator; Region: HTH_SoxR; cd01110"
+ /db_xref="CDD:133385"
+ misc_feature complement(order(3317249..3317257,3317303..3317305,
+ 3317345..3317353))
+ /locus_tag="SARI_03411"
+ /note="DNA binding residues [nucleotide binding]"
+ /db_xref="CDD:133385"
+ misc_feature complement(order(3317051..3317056,3317063..3317065,
+ 3317075..3317077,3317093..3317095,3317105..3317107,
+ 3317162..3317164,3317189..3317194,3317204..3317206,
+ 3317213..3317215))
+ /locus_tag="SARI_03411"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:133385"
+ misc_feature complement(order(3317000..3317002,3317018..3317020,
+ 3317024..3317026,3317033..3317035))
+ /locus_tag="SARI_03411"
+ /note="[2Fe-2S] cluster binding site [ion binding]; other
+ site"
+ /db_xref="CDD:133385"
+ gene 3317476..3317799
+ /locus_tag="SARI_03412"
+ CDS 3317476..3317799
+ /locus_tag="SARI_03412"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR000005"
+ /inference="protein motif:HMMSmart:IPR000005"
+ /inference="protein motif:ScanRegExp:IPR000005"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:REFSEQ:YP_219131.1"
+ /note="regulates genes involved in response to oxidative
+ stress"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional regulator SoxS"
+ /protein_id="YP_001572383.1"
+ /db_xref="GI:161505271"
+ /db_xref="InterPro:IPR000005"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /translation="MSHQQIIQTLIEWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRT
+ ITHQTLGEYIRQRRLLLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRREFDRTPSD
+ YRHRL"
+ misc_feature 3317476..3317796
+ /locus_tag="SARI_03412"
+ /note="DNA-binding transcriptional regulator SoxS;
+ Provisional; Region: PRK10219"
+ /db_xref="CDD:182314"
+ misc_feature 3317677..3317790
+ /locus_tag="SARI_03412"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ gene 3318289..3318570
+ /locus_tag="SARI_03413"
+ CDS 3318289..3318570
+ /locus_tag="SARI_03413"
+ /inference="similar to AA sequence:INSD:AAL23087.1"
+ /note="'COG: NOG13912 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572384.1"
+ /db_xref="GI:161505272"
+ /translation="MATITTGVVLLRWQLLSAVLMFLASTLNIRFRKSDYIGLAVISS
+ GLGVVSACWFATGLLGITMMDLAAIWHNIEAVMVETMSHTPPEWPMVLT"
+ gene 3319188..3319856
+ /locus_tag="SARI_03414"
+ CDS 3319188..3319856
+ /locus_tag="SARI_03414"
+ /inference="similar to AA sequence:INSD:AAY88083.1"
+ /note="'Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572385.1"
+ /db_xref="GI:161505273"
+ /translation="MKDKVNKNIHSATSSHISTIGMTANCSGYTRSNKIVVIGPCEAE
+ VIGIIALLQHDGFQVCQGKGVKLDAGDLLIVTLSTVPLLGWWRHLEYLHILKRKGKYQ
+ MLAIIPTDLKEIMLRQSICPIIEGGETLAQLHNALLVAAETWKKGSLPRINRRKNTPD
+ RKLTAGQARAIYNLLEGEYIDSKTQYSQRYLALERLGFSGTAQFSLFTAGIGNVIQRH
+ NFIF"
+ gene 3320607..3321497
+ /locus_tag="SARI_03415"
+ CDS 3320607..3321497
+ /locus_tag="SARI_03415"
+ /inference="protein motif:FPrintScan:IPR000005"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR000005"
+ /inference="protein motif:HMMSmart:IPR000005"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:INSD:CAC05791.1"
+ /note="'KEGG: bat:BAS3585 0.00093 Ada regulatory
+ protein/6-O-methylguanine-DNA methyltransferase K00567;
+ COG: NOG22229 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572386.1"
+ /db_xref="GI:161505274"
+ /db_xref="InterPro:IPR000005"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /translation="MSKQNEHFVKQVSTGIFDDKMTNLEISLPFCFFLYTKDRPFYIS
+ FSGDILKINKGQAIFIKKSVPFSVLLNWGKMENGLVRNDIVSLKIPQQAIIEYNRHYI
+ YKDQNEPRAWASNDYIIINFSHEQTKDYTLINALIESFPVTATGEILYDHVDEAKYML
+ ILSLIKQKNAALEDMILSYSSLTTSEKVASLIMSDYSKNWQSKDLAMQMNMSVSTFKK
+ KMYKDTGSVSSYITKIKMIEALRQLRRTNRPINSIAISLGYTSSSYFTSVFKKHFKIF
+ PSEVRKNDGNPTEGSTENYP"
+ misc_feature 3321096..3321452
+ /locus_tag="SARI_03415"
+ /note="AraC-type DNA-binding domain-containing proteins
+ [Transcription]; Region: AraC; COG2207"
+ /db_xref="CDD:225117"
+ misc_feature 3321324..3321452
+ /locus_tag="SARI_03415"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ gene complement(3321746..3323812)
+ /locus_tag="SARI_03416"
+ CDS complement(3321746..3323812)
+ /locus_tag="SARI_03416"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /note="'KEGG: reh:H16_B0690 7.1e-51 rtxB2; ABC-type RTX
+ toxin transporter, ATPase and permease components: Prot1E
+ family;
+ COG: COG2274 ABC-type bacteriocin/lantibiotic exporters,
+ contain an N-terminal double-glycine peptidase domain;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572387.1"
+ /db_xref="GI:161505275"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MDTKLEPYYLSAENALSIVSKKFNIKIDIKEEDINIRFKKYDRN
+ NTDDSIQMKNFFLSLGLSLQDILFSSGEDLLNEPMPILLLTPEMKWMVCISGGQKIKL
+ VNARGELCYVEIPDEYLKKLSAFSILPLNKVVDSIRVNNIIKNSLSMNKVFYTKYFFS
+ SLFMAIFALTIPVFSNLFYDKLIPSASVSSLFGVAIIVAVFIVFEFILRTSKDIYQSI
+ TARQDDVDIDISFLEAVLYGKKKNGKSMSSAFVLWNEFQKVKPILLNSVFQRIADIPI
+ FLIFIAVIYVNLGWVVVVPIIVFIISIILSIVNHHYTNELMNKQKEGQKNRNVFISEV
+ FLSIKMIHTLNNQGLLFDWVNTSNEQSYLNLKIRKLNLIYQSILGSMSSITQITIMII
+ AFFMVIKGDITTGAIVSSVIVSGRISGITSNFSSTLISILSAEKTGKDLLSFFDEDQE
+ EKTPALQSISKCEGEISIRGVSYQYDAQSSVIINRLSIDIPSGQRVAIIGDCGAGKSS
+ LLGLLSGYLSPTDGAILYDGYNLGHLSQNFFSQHLSVVTTHDVLFTGTVESNFALKPQ
+ NDRGRVLKALHITNCGFILQHPMGLKFPVNFMAKNLSSGQQQQLLLARSLSSDASVFL
+ WDEPTSNLDENTEKQIFDNLDEFIQGNTLIMITHRRYLIKYFDRVLVMKGGKVIRDCT
+ PEKLMG"
+ misc_feature complement(3321752..3323683)
+ /locus_tag="SARI_03416"
+ /note="ABC-type bacteriocin/lantibiotic exporters, contain
+ an N-terminal double-glycine peptidase domain [Defense
+ mechanisms]; Region: SunT; COG2274"
+ /db_xref="CDD:225183"
+ misc_feature complement(3321773..3322423)
+ /locus_tag="SARI_03416"
+ /note="ATP-binding cassette transporter nucleotide-binding
+ domain; Region: ABC_ATPase; cl17201"
+ /db_xref="CDD:247755"
+ misc_feature complement(3322292..3322315)
+ /locus_tag="SARI_03416"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(order(3321839..3321841,3321932..3321937,
+ 3322169..3322171,3322289..3322297,3322301..3322306))
+ /locus_tag="SARI_03416"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(3322169..3322180)
+ /locus_tag="SARI_03416"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(3321980..3322009)
+ /locus_tag="SARI_03416"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(3321932..3321949)
+ /locus_tag="SARI_03416"
+ /note="Walker B; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(3321914..3321925)
+ /locus_tag="SARI_03416"
+ /note="D-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(3321833..3321853)
+ /locus_tag="SARI_03416"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213179"
+ gene complement(3323857..3345921)
+ /locus_tag="SARI_03417"
+ CDS complement(3323857..3345921)
+ /locus_tag="SARI_03417"
+ /inference="protein motif:HMMPfam:IPR000601"
+ /inference="protein motif:HMMPfam:IPR011123"
+ /inference="protein motif:ScanRegExp:IPR002345"
+ /inference="protein motif:superfamily:IPR000601"
+ /inference="protein motif:superfamily:IPR000859"
+ /inference="protein motif:superfamily:IPR008957"
+ /inference="protein motif:superfamily:IPR008965"
+ /inference="protein motif:superfamily:IPR008979"
+ /inference="protein motif:superfamily:IPR008985"
+ /inference="protein motif:superfamily:IPR011009"
+ /inference="protein motif:superfamily:IPR011045"
+ /note="'KEGG: mmr:Mmar10_2493 2.1e-21 serralysin K01406;
+ COG: NOG39362 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572388.1"
+ /db_xref="GI:161505276"
+ /db_xref="InterPro:IPR000601"
+ /db_xref="InterPro:IPR000859"
+ /db_xref="InterPro:IPR002345"
+ /db_xref="InterPro:IPR008957"
+ /db_xref="InterPro:IPR008965"
+ /db_xref="InterPro:IPR008979"
+ /db_xref="InterPro:IPR008985"
+ /db_xref="InterPro:IPR011009"
+ /db_xref="InterPro:IPR011045"
+ /db_xref="InterPro:IPR011123"
+ /translation="MKNMNIKKVFADQNSVIDLSSLGDAKGAKVSLAGPDMNITTSHG
+ SVIIVNGALYSSIKGNNLIIKFKDKSIPGSKVIGSVDLKDIQLERIDSSLVDAGLVEK
+ KGNGKNRNARKDEELQKQLDDAEGAKKEADKAKEEAEKAKEAAEKAISEAFEIQNSSK
+ QIEEMLQNFLSDNVAKDNLAQQDNAIQQNTLSKAAQNIKQDEAEKIIPQPLNKNTGSG
+ RSNSSKNEENQFEAEPVKEKLKISFKLAAESNSGSKDDSITNFTKPQFIGSTSPNATV
+ VIKINGISVGQVVADKLGNFTFTAPEKLADGTYNLEAEATTGNAMGSTKLAITIDSVI
+ DKPSFELSPESSIPGHQGLTATLTPSIIGTAEENAKVNIYVNDKLITSVDVDKNGKWS
+ YGFKGKELIEGDNNIKVVAVDKAGNQSEISNIITIDTIPPEKPTIELDINSDSGVKDD
+ NITNSTLPTFIGVAEPGATVSIYIGIKHLGDVVAAKDGSWSYTLTEPLKDGEYHLTAT
+ ATDIAGHTSETSELTFTIDTRISYFSAELDPADDSGIVGDNVTNNSRPTFIGKSEPNT
+ TINVKNSETGELVVLKANAEGEWQFAFTSDSAEGVNNLVFTVEDVAGNQKDFYFSYVI
+ DTVAPTAPTVSLDDFVTLPNGIILSGDDTPALVGTAEPKSTISILREGKFYASIDVDS
+ NGSWSYQFNEKLPQGVYDIEIVSQDIAGNKSSAIKYSFTIQTEVVIPKAELDAVDDSG
+ EKGDWITNKHNALTLLGTAGKFATVNIIIDGKAIGVTTADEHGNWTFDISRNLSDDVY
+ TVTVEAVDPLGNTASADYQLTIDSFTPIPTVMLHDSADSGVKGDLITRVNTPLFTGSA
+ EPNAKVSIYVDGILSGEAIAGDDGVWNFQFSNILPDGMHEVMVKAEDIAGNKASSSIY
+ NFQILTHTQKPTIELVDDTGLDNTDHIINEKRPALTGTAAPYSIVKLYIDNALVTEVR
+ TNKDGVWDYTLKPDQSLADGDHKITATVEDIAGNIAHSDAFLLSVDTTISIPVVSLSP
+ DSESGVLDDNLTNIPKPTLILRNIDSDVRNVQVWDAISNTQIGIATQQSNGTWTYTFT
+ SDLIDGLHQVYVKAEDIAGNKVTGPTFDFTIDTTLSIPVISLIAKDDTGVADDNITNI
+ NKPDFIISGIDSDAHRVVVQVTHNGVNEQIVLTQDGGNWVFTPASTWDDGSYTLQVTV
+ EDEAGNIRQSTPLTVKVDTQIAINSIELINDTGIADDNITNDMRPHFRVEVPNDVNMV
+ RLSIDGGKTWGSATKNTAGIWDYSWPTNVTEGSHILTVEATDIAGNKLTQTLDFTIDT
+ LLTVPTIALDSADDSGVTGDNITNSKTPGFTLGNIDGDVIRVALQITHNGKNEVVALT
+ QSGGNWVFTPDHDWADGSYTLQVTVEDEAGNIRQSTPLTVKVDTQIAIDNIELINDTG
+ MVGDNLTNDIHPQFRVTVPDDVDRVRLSIDGGKTWVNATPGLVKGSWDYTWLGKVPEG
+ KHTLIVEATDIAGNTATRTLDFTVDTTLSVPTIMLDTANDSGVTDDNITNERAPGFTL
+ GNIDADASQVVVQVVHNGKSEEVELTQTSGKWVFTPTSEWVDGNYTLTVKVTDEAGNT
+ RQSVPLSVKVDTQITIDGILLVNDSGITGDNITNEVHPHFRVTVPEDVNVVRLSINSG
+ TTWINATQSSTGIWDYTWPDALPEGKHTLVVEAIDIAGNTVTRTLDFTVDTTLLDPTI
+ TLDTANDSGVPGDNITNEKTPGFTINGIDADAIRVAVQVTHNGTSKEVELTQSGGQWH
+ FTPTSDWADGKYTLTVKVEDRAGNINQSVPLAVTIDTQTEINNIVLVNDTGVPDDNLT
+ NDVRPEFRIEVPEDVNVVRLSIDGGKTWVDANKTSAGVWDYNWTTDLTEGVHMLTVEA
+ TDIAGNTATRTLDFTVDTTLSVPTITLDTANDSGVPGDNITNEKTPGFTINGIDADAI
+ RVAVQVTHNGTSKEVELTQSGGQWHFTPTSDWADGKYTLTVKVEDRAGNINQSVPLAV
+ TIDTQTEINSIVLVNDTGVPDDNLTNDVRPEFRVTVPEDVNAVRLSIDGGTTWVNATK
+ TSAGIWNYSWTTDLTEGAHMLTVEATDAAGNTATRTLDFTIDTTLSMPTITLDNADDT
+ GVQGDDLTNRPQPNFILQHIDADVASVVVSVTHDGTTSVFDASQEAGGWRFTPDSDWA
+ DGSYTLSVMVTDKAGNVSQSTPLTVTVDTHISIDKVELVNDSSVVGDNMTNDSHPQFR
+ VTVPEDVNAVRLSIDGGTTWVNATKGAAGIWDYTWPDEVKDGKYTLQVEATDKAGNTT
+ TQMLAFTIDTTLTKPTIALDHKDDSGITDDNITNAKKPGFTLDNIDADAIRVVVQVTH
+ DGKSKEVALTKSEGQWSFTPTVPWNDGAYTLTVMVEDKAGNVSHSAPLTVTVDTQTAI
+ NSIELVNDTGIPGDSLTNAVRPHFRVAVPDDVKTVRLSIDGGKTWGDAKKTSAGVWDY
+ SWLTDVTEGAHTLTVEATDVAGNTVKETMSFTIDTTLSVPLIALDSADDSGAKGDELT
+ RVNRPTFLLDNIDNDARYVTVEVQHGSVREVLKATQSASGRWSFTPVGDWADGQYTLT
+ VKVEDEAGNIRQSAPLTVTVDTQTAIDGIELVNDHGISGDNLTSALRPEFRVTTPGDV
+ NAVRLSLDGDTNWVNATKNAAGVWEYSWPGDVGEGKHTLTVEATDAAGNTATRTLEFT
+ IDTTLSEPVITLDSADDSGNKGDNVTSDRSPGFTIENIDPDVRRVTVQIAHDGSSREV
+ ELTQTGGRWHFTPDSAWTDGSYTLTVKVEDNAGNIRYSTPLDVKVDTHTAIARIELVN
+ DNGVPDDNLTNEMRPQFRVTVPEDVTVVRLSLDGSGSWVNATAGATKGEWNYSWPSDV
+ GEGKHTLTVEVTDAAGNTATKTLDFSIDTKLSEPVITLNSADDTGVPGDGLTSRAQPS
+ FTLQDIDADVVRVTVSVEHGGRTETFDVLQGAGGWSFTPTAAWADGSYTLKVTVEDEA
+ GNIRHSAPLDVKVDTQTVIDRIELVNDSGEPADNLTNDVRPEFRVTVPEDVNRVRVSL
+ DGGKTWMDATKASAGVWSYTWSSDVTEGAHVLTVEATDIAGNTATRTLDFTIDTTLST
+ PTIELDGPDDTGVQSDNLTNRPQPTFILKHVDADAASVVVSVKHGGTTTTFAATNGAG
+ GWRFTPASDWADGAYTLSVTVTDKAGNVSHSVPLTVNVDTHVTIDSIVLVNDSSVIGD
+ NLTNEVRPHFRVTVPGDVNVVRLSLNDGKTWVNATQSAAGDWEYIWPDDVTEGKHTLT
+ VEATDIAGNKATQMLEFTIDTTLSTPTIRLDTVDDSGVPGDNITNEKTPGFTINGIDA
+ DASQVMVVVTHNGKSEELTLTQVSGRWHFTPDSDWTDGNYTLTVKVEDKAGNMSQSSP
+ LTVTVDTQTVINSIVLVNDTGIVGDNMTNNVHPHFRVTVPEDVNVVRLSIDGGTTWGN
+ ATQSAVKGIWNYNWPTDVGDGKYTLMVEAIDAAGNKATQTLEFIVDATLLDPTITLDT
+ ANDSGVPGDNITNEKTPGFTINGIDADAIRVAVQVTHNGTSKEVELTQSGGQWHFTPT
+ SDWADGKYTLTVKVEDRAGNINQSVPLAVTIDTQTEINNIVLVNDTGVPDDNLTNALR
+ PEFRIEVPEDVNVVRLSIDGGKTWVDANKTSAGVWDYNWTTDITDGVHTLTVKVTDVA
+ GNTATRTLDFTVDTTLSVPTITLDTANDSGVPGDNITNEKTPGFTINGIDTDASRVVV
+ TVTHNGTNQEVELTQSGGQWTFMPASDWVDGNYTLTVKVEDRAGNVSQSAPLAVTIDT
+ QTEINNIVLVNDTGVPDDNLTNALRPEFRIEVPEDVNVVRLSIDGGKTWVDANKTSAG
+ VWDYNWTTDITDGVHTLTVKVTDVAGNTATRTLDFTVDTTLLVPTITLDNADDSGTKG
+ DDLTNVNKPTFLLGNIDSDARFVTVEIQHGSIKEVLTATRGTDGRWHFTPDNVWGDGR
+ YTLTVKVEDEAGNIRYSAPLSVTVDTDITINKIELVNDSGVVGDNMTNDIHPQFRVTV
+ PEDVNSVRLSIDGGTTWVKATQGAAGTWGYTWPDDVKDGKYTLQVEATDKAGNTITQM
+ LEFTIDTTLSIPTIELDSKDDTGTQGDELTHRTQPKFILQHIDVDAVSVMVSVEHGGV
+ TSTFDAIKGASGWSFTPTAPWGDGAYTLTVMVEDKAGNVSHSAPLTVTVDTQTAINSI
+ ELVNDTGIPGDSLTNAVRPHFRVAVPDDVKTVRLSIDGGKTWGDAKKTSAGVWDYSWL
+ TDVTEGAHTLTVEATDVAGNTVKETMSFTIDTTLSVPLIALDSADDSGAKGDELTRVN
+ RPTFLLDNIDNDARYVTVEVQHGSVREVLKATQSASGRWSFTPVGDWADGQYTLTVKV
+ EDEAGNIRQSAPLTVTVDTQTAIDGIELVNDHGISGDNLTSALRPEFRVTTPGDVNAV
+ RLSLDGDTNWVNATKNAAGVWEYSWPGDVGEGKHTLTVEATDAAGNTATRTLDFTVDT
+ TLSEPVITLDSADDSGNRGDNVTSVRSPGFTIENIDPDANRVTVQIAHDGSSREVELT
+ QTGGRWHFTPDSEWTDGSYTLTVKVEDNAGNIRYSTPLDVKVDTHTAIARIELVNDNG
+ VPDDNLTNEMRPQFRVTVPEDVTVVRLSLDGSGSWVNATAGATKGEWNYSWPSDVGEG
+ KHTLTVEVTDAAGNTATKTLDFSIDTKLSEPVITLNSADDTGVPGDGLTSRAQPSFTL
+ QDIDADVVRVTVSVEHGGRTETFDVLQGAGGWSFTPTAAWADGSYTLKVTVEDEAGNI
+ RHSAPLDVKVDTQTVIDRIELVNDSGEPADNLTNDVRPEFRVTVPEDVNRVRVSLDGG
+ KTWMDATKASAGVWSYTWSSDVTEGAHVLTVEATDIAGNTATRTLDFTIDTTLSTPTI
+ ELAPDQDTGQSKNDNLTSLTQPVFVLGHIDNDVQRVELQIEHNGTFKNIILTESADGW
+ RYRPDAALNDGSYKLTVTVTDTAGNKTTSAPLTVTIDSTLSTPVIALANGEDSGVVGD
+ QLTNHDHPVFDLSHIDSDALHVMVRVTHNGSSHEEAAVFNNGKWRFSPSVSWADGLYQ
+ LAVVVEDRAGNVKESAPLDVRIDTTTTINNIVLLNDTGVLGDQLTNNAKPSFRVEVPA
+ DVAQMRATLDGGTTWIPIRRNADGQWIFASTNNLTDGQHTLRIEATDTAGNVASKDLV
+ FNIDTHLQIPTIALGAGQDTGANTSDHITNISRPTFVIGNVDADVIKVMVTIGTNTYN
+ ATKVGGAWEFRPDNAIPDGSYNVSVTIEDKAGNIATSQPLSIMVDTRAEINSVTLLTD
+ SGDSSSDNITNVNKPQFEIVAANDTVQVRVKIDNTGNWIDLTQSVEGHWEFNVGTALP
+ DGQHSLLVEVVDVAGNVAQQTLNFTVDTTLREPNIVLDPTQDTGDDSNDNITNINKPT
+ FIIGNVDNDVSHIVIHLDGRDYIIENNGAKLTFTPDKPLTDGHHTLTVTVTDIAGNTK
+ TSSELQVEIDTQVQIDRVSLTTDSGVNDSDRITNVARPSFNIVTPDDVTKVLVSFDGV
+ IWSPASKNAAGQWDFTAGSALLEGHYVLHVQATDRAGNTANSSLAFTVDTHVDGLNIT
+ MLDDTGNDAADRITNITSPRFEISARESLQVVTVTLNGNVTTLNKGMGNKWIYTPEIP
+ LLDGHYKLEVTAEDIAGNTINQEISFTIDTTVPVPDVDLLDADDSGESAVDNITNVTK
+ PRFIISDIPTDIDTVTIKINGVSYPITLDGSNTGTFQVPVALKDGVYEAVVVFRDLAG
+ NISETKLPFTIDTATSVSVRMDPTSDTGSSNSDNLTNRKSPKFGGTAEPDAKLVITII
+ DDTSGHEVLKKLVTVGVDGNWSMTPDALADGIYTIKVVSTDVAGNTAEAQDRFTIDTV
+ TPDPTIQLTDSSIDDMHEATSLRPEFKGIAEAFSTIMIQWDGKVIGSANANSNGEWSW
+ TPPSILTPGSYVISIVAKDKAGNESSQVDFPVVIPVIDVTPPTIKLSDDSDSGALGDF
+ ITNDKTPTLIGSTLPNTIVSIYIDGKKVGEATSDTAGRYAFQMQEQPDGTYVVEVGIL
+ NPRVNEEIRSAAVSLVIDTQVADLEWHISGIHEDKYINTVTPEISGISEPNSKITVFV
+ NGVEKAAAYTTAGGHWGVILPTLGNDGNYVLTFKVEDIAGNVKEFGPQEITLDTVIEP
+ LTVTLREVDDSGKLGDWITNKSHVNIDGTAEAGSTLTIKTQGGVVVTTFEVGSDGHWS
+ AELDLSNGNNIFVVESVDKAGNSQQKELLVEYDTQIEISAISLSRDSNSGDKYDLITN
+ DKSPELVAMTEPGATVQVYINDVLQATVEANSAGNVSYTMPANSADGNYHVQFVATDI
+ AGNRTESAVATVTIDSEIAVFTIDEGSLPTISNSRALSVAGQGEAGAQVSIFVDNKLV
+ NVVMVEADGSWRAPILLQDDGTFKIHFSITDIAGNTQASKNFSVDVDSSTEFPTITLE
+ DSSNSGLVDDLITNHNTPSFVGTAEAGATIHFYVDEKIVANILVQDDGRWSYQFDNSL
+ KDGEYSIRVVAEDTAGNRAESPRLIVTIDTSTYIEPPTLTAGSDNGMYINDGVTSQTR
+ PQFSINGEFNQSVQIYIDGKLVDTVTVTDRNQVYQPVAPLGDGSHNIYYVITDKAGNT
+ ATSKTLDFSIDTSNKTPVVIESIDGHTLAEMTGSDGKIYITDTTHNIIFRGSAEPDSL
+ MDLTINGLNVGQVLVSKTGEWQMPVNPVYLSQGLLEIKIKSTDRGGNVNEKSFSIWVD
+ TMIEDFTSELDDNKSSSQNDWWSNNTLITMRGLGEAGATVSLVLAGVTLATTVVAANG
+ QWALLTDQLPEGKYDITLSIEDNAGNRKEEIREIFIDRAAPVAPAITYSDIVDDLVIM
+ KGTGEAKSKLTITDSEGNIYTLTVPDNGNWSMAIPYPSEGKFTISSTDRIGNTSDVVS
+ VDLIREIPTISLAVDSNSGSKNDNITQDKQPTFIIGNLESDIVNVQIDINGIAYNAEK
+ RADGVWFFTPDIALADGTYTISVTANDAAGNQKNSLPITITIDSTLKVPEIALAAGED
+ TGAPDSDNVTNHTQPKFTLQHIDADVTGVTVSVAHNGTTDTYPVTKGDDGWSFSPSAA
+ WSDGNYTLSVTVVDGAGNTQQSSSLTVTVDSTITATAPVEAGDVSEFAMATDVAQPES
+ EMVSIESEKNHSPAMFSMMSAVGEVAAQEDAYNIVLLNTESGDVTERSISQTPSFAIS
+ VPDNIVNVSVMFEGEEIDLPINNQKAIFEVPVPLNDGEYTIDVKFIDKDADYLIKEKT
+ FSVDHSSADIVNSMGERGNTEDEVNVSAPESAVTHHNNGAVEIFTISEVSLPVDNQEE
+ HA"
+ misc_feature complement(3344338..3344478)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(3342862..3343005)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(3342556..3342699)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(3342250..3342405)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(3341680..3342081)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_3; pfam13750"
+ /db_xref="CDD:205924"
+ misc_feature complement(3341653..3341808)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(3341395..>3341532)
+ /locus_tag="SARI_03417"
+ /note="Sulfite oxidase (SO) family, molybdopterin binding
+ domain. This molybdopterin cofactor (Moco) binding domain
+ is found in a variety of oxidoreductases, main members of
+ this family are nitrate reductase (NR) and sulfite oxidase
+ (SO). SO catalyzes the...; Region: SO_family_Moco;
+ cl00199"
+ /db_xref="CDD:241679"
+ misc_feature complement(3341080..3341481)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_3; pfam13750"
+ /db_xref="CDD:205924"
+ misc_feature complement(3341053..3341190)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(3340453..3340593)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(3340201..>3340344)
+ /locus_tag="SARI_03417"
+ /note="Sulfite oxidase (SO) family, molybdopterin binding
+ domain. This molybdopterin cofactor (Moco) binding domain
+ is found in a variety of oxidoreductases, main members of
+ this family are nitrate reductase (NR) and sulfite oxidase
+ (SO). SO catalyzes the...; Region: SO_family_Moco;
+ cl00199"
+ /db_xref="CDD:241679"
+ misc_feature complement(3339499..3340260)
+ /locus_tag="SARI_03417"
+ /note="Putative flagellar system-associated repeat;
+ Region: SWM_repeat; pfam13753"
+ /db_xref="CDD:222362"
+ misc_feature complement(3339856..3339996)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(3339604..>3339756)
+ /locus_tag="SARI_03417"
+ /note="Sulfite oxidase (SO) family, molybdopterin binding
+ domain. This molybdopterin cofactor (Moco) binding domain
+ is found in a variety of oxidoreductases, main members of
+ this family are nitrate reductase (NR) and sulfite oxidase
+ (SO). SO catalyzes the...; Region: SO_family_Moco;
+ cl00199"
+ /db_xref="CDD:241679"
+ misc_feature complement(3339265..3339396)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(3338971..3339117)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(3338245..3339066)
+ /locus_tag="SARI_03417"
+ /note="Putative flagellar system-associated repeat;
+ Region: SWM_repeat; pfam13753"
+ /db_xref="CDD:222362"
+ misc_feature complement(3338662..3338802)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(3338410..>3338562)
+ /locus_tag="SARI_03417"
+ /note="Sulfite oxidase (SO) family, molybdopterin binding
+ domain. This molybdopterin cofactor (Moco) binding domain
+ is found in a variety of oxidoreductases, main members of
+ this family are nitrate reductase (NR) and sulfite oxidase
+ (SO). SO catalyzes the...; Region: SO_family_Moco;
+ cl00199"
+ /db_xref="CDD:241679"
+ misc_feature complement(3337594..3338469)
+ /locus_tag="SARI_03417"
+ /note="Putative flagellar system-associated repeat;
+ Region: SWM_repeat; pfam13753"
+ /db_xref="CDD:222362"
+ misc_feature complement(3338062..3338208)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(3337774..3337920)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(3337048..3337845)
+ /locus_tag="SARI_03417"
+ /note="Putative flagellar system-associated repeat;
+ Region: SWM_repeat; pfam13753"
+ /db_xref="CDD:222362"
+ misc_feature complement(3337471..3337605)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(3336538..3337245)
+ /locus_tag="SARI_03417"
+ /note="Putative flagellar system-associated repeat;
+ Region: SWM_repeat; pfam13753"
+ /db_xref="CDD:222362"
+ misc_feature complement(3336865..>3336993)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(3336613..>3336765)
+ /locus_tag="SARI_03417"
+ /note="Sulfite oxidase (SO) family, molybdopterin binding
+ domain. This molybdopterin cofactor (Moco) binding domain
+ is found in a variety of oxidoreductases, main members of
+ this family are nitrate reductase (NR) and sulfite oxidase
+ (SO). SO catalyzes the...; Region: SO_family_Moco;
+ cl00199"
+ /db_xref="CDD:241679"
+ misc_feature complement(3336274..>3336390)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(3335671..3335817)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(3334552..3335475)
+ /locus_tag="SARI_03417"
+ /note="Putative flagellar system-associated repeat;
+ Region: SWM_repeat; pfam13753"
+ /db_xref="CDD:222362"
+ misc_feature complement(3335071..3335211)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(3334783..3334929)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(3334474..3334614)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(3334225..>3334365)
+ /locus_tag="SARI_03417"
+ /note="Sulfite oxidase (SO) family, molybdopterin binding
+ domain. This molybdopterin cofactor (Moco) binding domain
+ is found in a variety of oxidoreductases, main members of
+ this family are nitrate reductase (NR) and sulfite oxidase
+ (SO). SO catalyzes the...; Region: SO_family_Moco;
+ cl00199"
+ /db_xref="CDD:241679"
+ misc_feature complement(3333880..3334023)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(3333622..>3333774)
+ /locus_tag="SARI_03417"
+ /note="Sulfite oxidase (SO) family, molybdopterin binding
+ domain. This molybdopterin cofactor (Moco) binding domain
+ is found in a variety of oxidoreductases, main members of
+ this family are nitrate reductase (NR) and sulfite oxidase
+ (SO). SO catalyzes the...; Region: SO_family_Moco;
+ cl00199"
+ /db_xref="CDD:241679"
+ misc_feature complement(3332860..3333681)
+ /locus_tag="SARI_03417"
+ /note="Putative flagellar system-associated repeat;
+ Region: SWM_repeat; pfam13753"
+ /db_xref="CDD:222362"
+ misc_feature complement(3333277..3333441)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(3333025..>3333177)
+ /locus_tag="SARI_03417"
+ /note="Sulfite oxidase (SO) family, molybdopterin binding
+ domain. This molybdopterin cofactor (Moco) binding domain
+ is found in a variety of oxidoreductases, main members of
+ this family are nitrate reductase (NR) and sulfite oxidase
+ (SO). SO catalyzes the...; Region: SO_family_Moco;
+ cl00199"
+ /db_xref="CDD:241679"
+ misc_feature complement(3332317..3333084)
+ /locus_tag="SARI_03417"
+ /note="Putative flagellar system-associated repeat;
+ Region: SWM_repeat; pfam13753"
+ /db_xref="CDD:222362"
+ misc_feature complement(3332677..3332823)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(3332389..3332535)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(3331663..3332460)
+ /locus_tag="SARI_03417"
+ /note="Putative flagellar system-associated repeat;
+ Region: SWM_repeat; pfam13753"
+ /db_xref="CDD:222362"
+ misc_feature complement(3332086..3332220)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(<3331174..3331860)
+ /locus_tag="SARI_03417"
+ /note="Putative flagellar system-associated repeat;
+ Region: SWM_repeat; pfam13753"
+ /db_xref="CDD:222362"
+ misc_feature complement(3331480..>3331608)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(3331228..>3331380)
+ /locus_tag="SARI_03417"
+ /note="Sulfite oxidase (SO) family, molybdopterin binding
+ domain. This molybdopterin cofactor (Moco) binding domain
+ is found in a variety of oxidoreductases, main members of
+ this family are nitrate reductase (NR) and sulfite oxidase
+ (SO). SO catalyzes the...; Region: SO_family_Moco;
+ cl00199"
+ /db_xref="CDD:241679"
+ misc_feature complement(3330883..3331035)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(3329992..3330141)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(3329398..>3329496)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(3328210..3328353)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(3326776..3326925)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_2; pfam12245"
+ /db_xref="CDD:204863"
+ misc_feature complement(3326206..3326346)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(<3324451..3325119)
+ /locus_tag="SARI_03417"
+ /note="Putative flagellar system-associated repeat;
+ Region: SWM_repeat; pfam13753"
+ /db_xref="CDD:222362"
+ misc_feature complement(3324775..3324933)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ misc_feature complement(3324466..3324615)
+ /locus_tag="SARI_03417"
+ /note="Bacterial Ig-like domain (group 3); Region:
+ Big_3_4; pfam13754"
+ /db_xref="CDD:222363"
+ gene complement(3345938..3347215)
+ /locus_tag="SARI_03418"
+ CDS complement(3345938..3347215)
+ /locus_tag="SARI_03418"
+ /inference="protein motif:FPrintScan:IPR003997"
+ /inference="protein motif:HMMPfam:IPR000089"
+ /inference="protein motif:superfamily:IPR011053"
+ /inference="similar to AA sequence:INSD:AAX68045.1"
+ /note="'KEGG: fnu:FN0522 5.0e-07 exonuclease SBCC K03546;
+ COG: COG0845 Membrane-fusion protein;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572389.1"
+ /db_xref="GI:161505277"
+ /db_xref="InterPro:IPR000089"
+ /db_xref="InterPro:IPR003997"
+ /db_xref="InterPro:IPR011053"
+ /translation="MNRKQSDRLMMIIITLTIMIVILTYFVKINSVVHGQGVITTKDN
+ AQLISLSKGGTIQDIYVTEGDTVKKGELLAKIVNLDLQKEYQRYKTQKGYLDKDVNEI
+ SFILDKRNEDGLISLDGVSSLSNKEVKANIELVHSQIRTKELKKNSLDSEIDGLQEKL
+ NSKENELALLAEEINILSPLVKKGISPYTNFLNKKQAYIKVKSEINDIESSITLKKDD
+ IELVANDIKALNNELRLSLSKLISKNQQELEVVNSTLKVIEKQLDEEDIYSPVDGVIY
+ KINKSATTHGGVIQAADLLFEIKPKVKTMLADVKIPPKYRDQIYLDEAVKLDVQSIIQ
+ PKMKSYSATIDNISPDSYEENTGGTIQRYYKVIISFDVNEDDLRWLKPGMTVDASIIT
+ GKHSIMEYLLSPLMKGVDKAFSEPVNTKRLNLS"
+ misc_feature complement(3345968..3347143)
+ /locus_tag="SARI_03418"
+ /note="type I secretion membrane fusion protein, HlyD
+ family; Region: type_I_hlyD; TIGR01843"
+ /db_xref="CDD:130902"
+ misc_feature complement(3346955..3347074)
+ /locus_tag="SARI_03418"
+ /note="Biotin-lipoyl like; Region: Biotin_lipoyl_2;
+ pfam13533"
+ /db_xref="CDD:205711"
+ misc_feature complement(3346082..3346417)
+ /locus_tag="SARI_03418"
+ /note="HlyD family secretion protein; Region: HlyD_3;
+ pfam13437"
+ /db_xref="CDD:222128"
+ gene complement(3347212..3348531)
+ /locus_tag="SARI_03419"
+ CDS complement(3347212..3348531)
+ /locus_tag="SARI_03419"
+ /inference="protein motif:HMMPfam:IPR003423"
+ /inference="similar to AA sequence:REFSEQ:YP_153133.1"
+ /note="'COG: COG1538 Outer membrane protein;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572390.1"
+ /db_xref="GI:161505278"
+ /db_xref="InterPro:IPR003423"
+ /translation="MKIKHFLLTAAFVMQGAHASEFAILPLSKLVDAALKHQPSVAVS
+ YYETEKKKSDLEATRASLYPTLDLSSGINNNRKESSGDERNIENKISLSYRITDFGVR
+ GANIRKSEYEKNSSDIDYEKTKNTVAQEVITTYYNISKYREMIDGINKEKEFYKNMLG
+ TFSLLVSSGVAMQSDLRKVQVSIDALNTRSIMYQSMLDDEMYKMKNMTGMQLSPDQIQ
+ SDEHFDLFKKYIFVDSPEKLMNMVMKYNDDYKMLVSARKAASEDINAANSSYFPTVDL
+ VSSYVQNNPSGSAKKSDYENEFKTGVNVSFNIFNGFRNSAQESKMVASYSQAKLQIDD
+ FLLKTRYNIDSQLSKYSAAKETYLVAERSHKNALQLTGLYEQEFQLGQKSLLDLISSR
+ NEAFQAYVSMVDSKYSLYMLKLQQLSLVFHLIDYLKGNSASELNITK"
+ misc_feature complement(3347227..3348468)
+ /locus_tag="SARI_03419"
+ /note="Outer membrane protein [Cell envelope biogenesis,
+ outer membrane / Intracellular trafficking and secretion];
+ Region: TolC; COG1538"
+ /db_xref="CDD:224455"
+ gene complement(3348521..3349912)
+ /locus_tag="SARI_03420"
+ CDS complement(3348521..3349912)
+ /locus_tag="SARI_03420"
+ /inference="protein motif:superfamily:IPR009079"
+ /inference="similar to AA sequence:INSD:AAX68043.1"
+ /note="'KEGG: pfa:PFL1155w 0.0032 GTP cyclohydrolase I
+ K01495;
+ COG: NOG07819 non supervised orthologous group;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572391.1"
+ /db_xref="GI:161505279"
+ /db_xref="InterPro:IPR009079"
+ /translation="MKSINKYRYFFTCFLIAIIPFIALSFDGIRGYVFDNFMVSAIYN
+ SVIIAIYIMGSVCTLFTVFKNCDAREILNTNNANKKSSTLSSLNQVIFADDFMKCDSN
+ LLIELDDSVSTARNQRLSFIMSCSNVSTLIGLLGTFAGLSITIGSIGNLLSTPSGVGG
+ ESSSNTLHMIVTMVASLSEPLKGMNTAFVSSIYGVVCAILLTSQSVFVRSSYALISAE
+ IKRLKVKRSRASSNRQRSLRIESETLFEFKELFREFFDNYKSIELSRTQAEEKKLTVF
+ SDGLSSLQNKLSDNTVILEQLSKQVDNYINISNKHYIQISDNMDNVAEHLSKGNALIS
+ ENNVMLAQLNHTQDSIDKKNDTVIASLDRCHQESVSQRKTIDSIAIENVKVTHLVTEM
+ KAAIDEDSNNIHSALSNLSAADEKIIDRTKMIGAEIVSYRETYIPLMEKITLMHQKLL
+ KQSLLHDEVKNED"
+ gene complement(3349909..3350556)
+ /locus_tag="SARI_03421"
+ CDS complement(3349909..3350556)
+ /locus_tag="SARI_03421"
+ /inference="similar to AA sequence:INSD:CAD09240.1"
+ /note="'COG: NOG26663 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572392.1"
+ /db_xref="GI:161505280"
+ /translation="MEDEGNPWPSFVDTFSTVLCIFIFLMLVFALNNMLIMYDNSIKV
+ YKTSNAENINPNAKEIKDEKEVINESTKVDEIDKTKTIDERNFSGATEKTGKEKGIYD
+ IANGQRVDMTATEKEFIITYYGRLRSFSEEDIKKLTAWLKEHGNNKLLIEMIVPQSDI
+ SYSDSLRLGYERGIILMKEIKIICPEVDIDMSVNSGTSGVGGKAIITTVDKKVSE"
+ misc_feature complement(<3350464..3350547)
+ /locus_tag="SARI_03421"
+ /note="hypothetical protein; Validated; Region: PRK09039"
+ /db_xref="CDD:181619"
+ gene 3351386..3351739
+ /locus_tag="SARI_03422"
+ CDS 3351386..3351739
+ /locus_tag="SARI_03422"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572393.1"
+ /db_xref="GI:161505281"
+ /translation="MSEVCQIFQEKTGHYGIMAGNREFYEGAGDSLPVQKYKGLFTIF
+ PFEYHLYVFNFIPVLSFTDKTTLFRKEPSKTSVRLIFNVLWNILSHTKVTVVSISYRT
+ LKNEVKPVVNILIEQ"
+ gene complement(3352067..3352597)
+ /locus_tag="SARI_03423"
+ CDS complement(3352067..3352597)
+ /locus_tag="SARI_03423"
+ /inference="protein motif:Gene3D:IPR012340"
+ /inference="protein motif:HMMPfam:IPR000424"
+ /inference="protein motif:HMMTigr:IPR011344"
+ /inference="protein motif:superfamily:IPR008994"
+ /inference="similar to AA sequence:INSD:AAX68040.1"
+ /note="binds to single stranded DNA and PriA helcase
+ facilitate replication restart"
+ /codon_start=1
+ /transl_table=11
+ /product="single-stranded DNA-binding protein"
+ /protein_id="YP_001572394.2"
+ /db_xref="GI:448236275"
+ /db_xref="InterPro:IPR000424"
+ /db_xref="InterPro:IPR008994"
+ /db_xref="InterPro:IPR011344"
+ /db_xref="InterPro:IPR012340"
+ /translation="MASRGVNKVILVGNLGQDPEVRYMPSGGAVANLTLATSESWRDK
+ QTGEMKEQTEWHRVVMFGKLAEVAGEYLRKGSQVYIEGQLRTRKWTDQSGQERYTTEI
+ NVPQIGGVMQMLGGRQGGGASAGGQQQGGWGQPQQPQQPQSGNQFSGGAQSRPQQSAP
+ APSNEPPMDFDDDIPF"
+ misc_feature complement(3352070..3352585)
+ /locus_tag="SARI_03423"
+ /note="Single-stranded DNA-binding protein [DNA
+ replication, recombination, and repair]; Region: Ssb;
+ COG0629"
+ /db_xref="CDD:223702"
+ misc_feature complement(3352286..3352573)
+ /locus_tag="SARI_03423"
+ /note="SSB_OBF: A subfamily of OB folds similar to the OB
+ fold of ssDNA-binding protein (SSB). SSBs bind with high
+ affinity to ssDNA. They bind to and protect ssDNA
+ intermediates during DNA metabolic pathways. All bacterial
+ and eukaryotic SSBs studied to date...; Region: SSB_OBF;
+ cd04496"
+ /db_xref="CDD:239942"
+ misc_feature complement(order(3352298..3352300,3352307..3352309,
+ 3352340..3352342,3352367..3352369,3352430..3352432,
+ 3352436..3352438,3352481..3352489,3352562..3352573))
+ /locus_tag="SARI_03423"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:239942"
+ misc_feature complement(order(3352289..3352291,3352295..3352297,
+ 3352334..3352339,3352343..3352345,3352349..3352351,
+ 3352373..3352378,3352415..3352417,3352421..3352423,
+ 3352427..3352429,3352433..3352435,3352439..3352444,
+ 3352478..3352483,3352502..3352504,3352532..3352534,
+ 3352550..3352558))
+ /locus_tag="SARI_03423"
+ /note="ssDNA binding site [nucleotide binding]; other
+ site"
+ /db_xref="CDD:239942"
+ misc_feature complement(order(3352355..3352357,3352361..3352363,
+ 3352367..3352369))
+ /locus_tag="SARI_03423"
+ /note="tetramer (dimer of dimers) interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:239942"
+ gene 3352845..3355670
+ /gene="uvrA"
+ /locus_tag="SARI_03424"
+ CDS 3352845..3355670
+ /gene="uvrA"
+ /locus_tag="SARI_03424"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMTigr:IPR004602"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /note="'The UvrABC repair system catalyzes the recognition
+ and processing of DNA lesions. UvrA is an ATPase and a
+ DNA-binding protein. A damage recognition complex composed
+ of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities.
+ When the presence of a lesion has been verified by uvrB,
+ the uvrA molecules dissociate'"
+ /codon_start=1
+ /transl_table=11
+ /product="excinuclease ABC subunit A"
+ /protein_id="YP_001572395.1"
+ /db_xref="GI:161505283"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR004602"
+ /translation="MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDT
+ LYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTIT
+ EIHDYLRLLFARVGEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKG
+ EHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVIDRFKVRNDLSQRLA
+ ESFETALELSGGTAVVADMDDEKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGA
+ CPTCDGLGVQQYFDPDRVIQNPDLSLAGGAIRGWDRRNFYYFQMLKSLAEHYKFDVDA
+ PWASLSANVHKVVLYGSGKENIEFKYMNDRGDTSVRRHPFEGVLHNMERRYKETESSA
+ VREELAKFISNRPCASCEGTRLNREARHVFVENTPLPAISDMSIGHAMDFFTNLKLSG
+ QRAKIAEKVLKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGV
+ MYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGV
+ HGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKQRVPANPEKVLKLTGARGNNLK
+ DVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHF
+ DKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRSRGYTPGRFSFNVRGGRC
+ EACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEARE
+ FFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYIL
+ DEPTTGLHFADIQQLLDVLHQLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGE
+ ILVSGTPETVAECEASHTARFLKPMLK"
+ misc_feature 3352845..3355667
+ /gene="uvrA"
+ /locus_tag="SARI_03424"
+ /note="excinuclease ABC subunit A; Reviewed; Region: uvrA;
+ PRK00349"
+ /db_xref="CDD:234734"
+ misc_feature 3352854..>3353192
+ /gene="uvrA"
+ /locus_tag="SARI_03424"
+ /note="ATP-binding cassette domain I of the excision
+ repair protein UvrA; Region: ABC_UvrA_I; cd03270"
+ /db_xref="CDD:213237"
+ misc_feature <3354231..3354524
+ /gene="uvrA"
+ /locus_tag="SARI_03424"
+ /note="ATP-binding cassette domain I of the excision
+ repair protein UvrA; Region: ABC_UvrA_I; cd03270"
+ /db_xref="CDD:213237"
+ misc_feature 3354681..3355553
+ /gene="uvrA"
+ /locus_tag="SARI_03424"
+ /note="ATP-binding cassette domain II of the excision
+ repair protein UvrA; Region: ABC_UvrA_II; cd03271"
+ /db_xref="CDD:213238"
+ gene 3355812..3356255
+ /locus_tag="SARI_03425"
+ CDS 3355812..3356255
+ /locus_tag="SARI_03425"
+ /inference="similar to AA sequence:REFSEQ:NP_463118.1"
+ /note="'COG: NOG26992 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572396.1"
+ /db_xref="GI:161505284"
+ /translation="MKLRYAITLLLCLFLSACTLPDRFSDVAFQQLTLLQARSTRFLQ
+ DAARIPWQKETLLKDDRDIRQIFFQAERVARQRGDKHRLDNLALLKDHYLRLYARVMQ
+ HKQPLTYIQAERYQQQNNQVWKLAMQGECLRWGARCAQRDQNGVY"
+ gene 3356242..3356580
+ /locus_tag="SARI_03426"
+ CDS 3356242..3356580
+ /locus_tag="SARI_03426"
+ /inference="similar to AA sequence:INSD:CAD09236.1"
+ /note="'COG: NOG29606 non supervised orthologous group;
+ Psort location: vesicles of secretory system, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572397.1"
+ /db_xref="GI:161505285"
+ /translation="MAFINEMRNLLTVAQAEHPGASSAIAEFIQTYKQAREDSDEGIR
+ ESAAFIARALQEYTRGWLDDDDIITLLEGQRDIALLRANNAQIALGSRIRSTIIRLID
+ IALASLVGAL"
+ gene complement(3356581..3356943)
+ /locus_tag="SARI_03427"
+ CDS complement(3356581..3356943)
+ /locus_tag="SARI_03427"
+ /inference="protein motif:HMMPfam:IPR007351"
+ /inference="similar to AA sequence:REFSEQ:YP_219117.1"
+ /note="'COG: COG2315 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572398.1"
+ /db_xref="GI:161505286"
+ /db_xref="InterPro:IPR007351"
+ /translation="MIMTISELLQYCMAKPGAEQSVHSDWKATQIKVEDVLFAMVKEV
+ EGRPAASLKTSPELAELLRQQHSDVRPSRHLNKAHWSTVYLDGSLPDSQLYYLVDASY
+ QQAVNALPEDKRKQLPQS"
+ misc_feature complement(3356584..3356937)
+ /locus_tag="SARI_03427"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: MmcQ; COG2315"
+ /db_xref="CDD:225197"
+ gene complement(3356940..3357404)
+ /locus_tag="SARI_03428"
+ CDS complement(3356940..3357404)
+ /locus_tag="SARI_03428"
+ /inference="protein motif:BlastProDom:IPR001602"
+ /inference="protein motif:HMMPfam:IPR001602"
+ /inference="protein motif:HMMPIR:IPR001602"
+ /inference="protein motif:HMMTigr:IPR001602"
+ /inference="protein motif:ScanRegExp:IPR001602"
+ /inference="similar to AA sequence:REFSEQ:YP_219116.1"
+ /note="'COG: COG0432 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572399.1"
+ /db_xref="GI:161505287"
+ /db_xref="InterPro:IPR001602"
+ /translation="MLHTIQEVFVFSKEQPMWYQRTITLSEKQRGFHLITDEIVDKLS
+ GLPPVETGLLHLLLLHTSASLTLNENCDPTVRADMERHFLKTVPDNAAYEHDYEGADD
+ MPSHIKSSLLGVSLLLPVRQGRLQLGTWQGIWLGEHRIHGGSRKIIATLQGE"
+ misc_feature complement(3356946..3357359)
+ /locus_tag="SARI_03428"
+ /note="Uncharacterized conserved protein [Function
+ unknown]; Region: COG0432"
+ /db_xref="CDD:223509"
+ gene complement(3357485..3358198)
+ /gene="aphA"
+ /locus_tag="SARI_03429"
+ CDS complement(3357485..3358198)
+ /gene="aphA"
+ /locus_tag="SARI_03429"
+ /inference="protein motif:HMMPfam:IPR005519"
+ /inference="protein motif:HMMTigr:IPR010025"
+ /inference="similar to AA sequence:INSD:CAD09233.1"
+ /note="Class B; non-specific; catalyzes the
+ dephosphorylation of organic phosphomonoesters; also has
+ phosphotransferase activity"
+ /codon_start=1
+ /transl_table=11
+ /product="acid phosphatase/phosphotransferase"
+ /protein_id="YP_001572400.1"
+ /db_xref="GI:161505288"
+ /db_xref="InterPro:IPR005519"
+ /db_xref="InterPro:IPR010025"
+ /translation="MKKITLALSAVCLLFTLNHSANALVSSPSTLNPGTNVAKLAEQA
+ PVHWVSVAQIENSLTGRPPMAVGFDIDDTVLFSSPGFWRGKKTYSPNSDDYLKNPAFW
+ EKMNNGWDEFSIPKEVARQLIDMHVRRGDSIYFVTGRSQTKTETVTNTLADNFHIPAA
+ NMNPVIFAGDKPGQNTKIQWLQEKNIRIFYGDSDNDITAARDCGIRGIRILRAANSTY
+ KPLPQAGAFGEEVIVNSEY"
+ misc_feature complement(3357587..3358129)
+ /gene="aphA"
+ /locus_tag="SARI_03429"
+ /note="haloacid dehalogenase-like hydrolase; Region:
+ Hydrolase; pfam00702"
+ /db_xref="CDD:216069"
+ misc_feature complement(3357575..3358006)
+ /gene="aphA"
+ /locus_tag="SARI_03429"
+ /note="Haloacid dehalogenase-like hydrolases. The haloacid
+ dehalogenase-like (HAD) superfamily includes L-2-haloacid
+ dehalogenase, epoxide hydrolase, phosphoserine
+ phosphatase, phosphomannomutase, phosphoglycolate
+ phosphatase, P-type ATPase, and many others; Region:
+ HAD_like; cd01427"
+ /db_xref="CDD:119389"
+ misc_feature complement(order(3357785..3357790,3357986..3357994))
+ /gene="aphA"
+ /locus_tag="SARI_03429"
+ /note="active site"
+ /db_xref="CDD:119389"
+ misc_feature complement(3357977..3357994)
+ /gene="aphA"
+ /locus_tag="SARI_03429"
+ /note="motif I; other site"
+ /db_xref="CDD:119389"
+ misc_feature complement(3357788..3357790)
+ /gene="aphA"
+ /locus_tag="SARI_03429"
+ /note="motif II; other site"
+ /db_xref="CDD:119389"
+ gene complement(3358385..3359578)
+ /locus_tag="SARI_03430"
+ CDS complement(3358385..3359578)
+ /locus_tag="SARI_03430"
+ /inference="protein motif:HMMPanther:IPR000796"
+ /inference="protein motif:HMMPfam:IPR004839"
+ /inference="protein motif:ScanRegExp:IPR004838"
+ /inference="similar to AA sequence:REFSEQ:NP_458546.1"
+ /note="catalyzes the formation of L-glutamate and an
+ aromatic oxo acid from an aromatic amino acid and
+ 2-oxoglutarate"
+ /codon_start=1
+ /transl_table=11
+ /product="aromatic amino acid aminotransferase"
+ /protein_id="YP_001572401.1"
+ /db_xref="GI:161505289"
+ /db_xref="InterPro:IPR000796"
+ /db_xref="InterPro:IPR004838"
+ /db_xref="InterPro:IPR004839"
+ /translation="MFQKVDAYAGDPILSLMERFKDDSRHDKVNLSIGLYYNEDGIIP
+ QLKAVAEAEARLNAQPHGASLYLPMEGLNTYRHTIAPLLFGADHPVLQQQRVATIQTL
+ GGSGALKVGADFLKRYFPDAGVWVSDPTWENHIAIFAGAGFEVSTYPWYDDATNGIRF
+ NDLLATLNTLPTRSIVLLHPCCHNPTGADLMPSQWDAVIEILKTRDLIPFLDIAYQGF
+ GAGMDEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVVCEDAEIAERVLGQL
+ KATVRRIYSSPPNFGAQVVATVLGDEALKASWLAEVEAMRTRIISMRQTLVKVLKGEM
+ PGRNFDYLLQQRGMFSYTGLSAEQVDRLRDEFGVYLIASGRMCVAGLNSSNVQRVAKA
+ FAAVM"
+ misc_feature complement(3358388..3359578)
+ /locus_tag="SARI_03430"
+ /note="aromatic amino acid aminotransferase; Provisional;
+ Region: PRK09257"
+ /db_xref="CDD:181731"
+ misc_feature complement(3358394..3359494)
+ /locus_tag="SARI_03430"
+ /note="Aspartate aminotransferase family. This family
+ belongs to pyridoxal phosphate (PLP)-dependent aspartate
+ aminotransferase superfamily (fold I). Pyridoxal phosphate
+ combines with an alpha-amino acid to form a compound
+ called a Schiff base or aldimine...; Region: AAT_like;
+ cd00609"
+ /db_xref="CDD:99734"
+ misc_feature complement(order(3358814..3358816,3358838..3358843,
+ 3358847..3358849,3358934..3358936,3359027..3359029,
+ 3359186..3359188,3359264..3359272))
+ /locus_tag="SARI_03430"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:99734"
+ misc_feature complement(order(3358697..3358699,3358706..3358708,
+ 3358814..3358822,3358955..3358957,3359156..3359158,
+ 3359261..3359263))
+ /locus_tag="SARI_03430"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99734"
+ misc_feature complement(3358838..3358840)
+ /locus_tag="SARI_03430"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:99734"
+ gene complement(3359763..3360842)
+ /gene="alr"
+ /locus_tag="SARI_03431"
+ CDS complement(3359763..3360842)
+ /gene="alr"
+ /locus_tag="SARI_03431"
+ /inference="protein motif:HMMPfam:IPR001608"
+ /inference="protein motif:HMMPfam:IPR011079"
+ /inference="protein motif:HMMPIR:IPR012155"
+ /inference="protein motif:HMMTigr:IPR000821"
+ /inference="protein motif:ScanRegExp:IPR000821"
+ /inference="protein motif:superfamily:IPR009006"
+ /inference="similar to AA sequence:INSD:AAA27022.1"
+ /note="converts L-alanine to D-alanine which is used in
+ cell wall biosynthesis; binds one pyridoxal phosphate per
+ monomer; forms a homodimer"
+ /codon_start=1
+ /transl_table=11
+ /product="alanine racemase"
+ /protein_id="YP_001572402.1"
+ /db_xref="GI:161505290"
+ /db_xref="InterPro:IPR000821"
+ /db_xref="InterPro:IPR001608"
+ /db_xref="InterPro:IPR009006"
+ /db_xref="InterPro:IPR011079"
+ /db_xref="InterPro:IPR012155"
+ /translation="MQAATVVINRRALRHNLQRLRELAPASKLVAVVKANAYGHGLLE
+ TARTLPDADAFGVARLEEALRLREGGITQPILLLEGFFDAADLPTISAQRLHTAVHNQ
+ EQLTALEAVELAEPVTVWMKLDTGMHRLGVRPEEAEAFYQRLTHCKNVRQPVNIVSHF
+ ARADEPECGATEHQLEIFNAFCQDKAGKRSIAASGGILLWPQSHFDWARPGIILYGVS
+ PLEHKPWGPDFGFQPVMSLTSSLIAARDHKAGEPVGYGGTWVSERDTRLGVVAMGYGD
+ GYPRAAPSGTPVLVNGREVPIVGRVAMDMICVDLGPNAQDKAGDPVVLWGEDLPVERI
+ AEITKVSAYELITRLTSRVAMEYID"
+ misc_feature complement(3359769..3360842)
+ /gene="alr"
+ /locus_tag="SARI_03431"
+ /note="alanine racemase; Reviewed; Region: alr; PRK00053"
+ /db_xref="CDD:234600"
+ misc_feature complement(3359769..3360836)
+ /gene="alr"
+ /locus_tag="SARI_03431"
+ /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
+ Enzymes, Proteobacterial Alanine Racemases; Region:
+ PLPDE_III_AR_proteobact; cd06827"
+ /db_xref="CDD:143500"
+ misc_feature complement(order(3359814..3359816,3360207..3360218,
+ 3360258..3360266,3360366..3360368,3360372..3360374,
+ 3360456..3360458,3360477..3360479,3360609..3360611,
+ 3360729..3360731,3360741..3360743,3360747..3360749))
+ /gene="alr"
+ /locus_tag="SARI_03431"
+ /note="active site"
+ /db_xref="CDD:143500"
+ misc_feature complement(order(3359814..3359816,3360207..3360212,
+ 3360216..3360218,3360261..3360266,3360366..3360368,
+ 3360609..3360611,3360729..3360731,3360741..3360743,
+ 3360747..3360749))
+ /gene="alr"
+ /locus_tag="SARI_03431"
+ /note="pyridoxal 5'-phosphate (PLP) binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:143500"
+ misc_feature complement(order(3359814..3359816,3360366..3360368,
+ 3360456..3360458,3360729..3360731,3360741..3360743))
+ /gene="alr"
+ /locus_tag="SARI_03431"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:143500"
+ misc_feature complement(order(3360078..3360080,3360741..3360743))
+ /gene="alr"
+ /locus_tag="SARI_03431"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:143500"
+ misc_feature complement(order(3359787..3359789,3359796..3359798,
+ 3359811..3359816,3359820..3359822,3359931..3359933,
+ 3359937..3359939,3360003..3360005,3360021..3360023,
+ 3360036..3360038,3360075..3360083,3360087..3360092,
+ 3360108..3360110,3360117..3360119))
+ /gene="alr"
+ /locus_tag="SARI_03431"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:143500"
+ gene complement(3360874..3362289)
+ /locus_tag="SARI_03432"
+ CDS complement(3360874..3362289)
+ /locus_tag="SARI_03432"
+ /inference="protein motif:BlastProDom:IPR007694"
+ /inference="protein motif:Gene3D:IPR007693"
+ /inference="protein motif:HMMPfam:IPR007693"
+ /inference="protein motif:HMMPfam:IPR007694"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR007692"
+ /inference="similar to AA sequence:INSD:AAL23070.1"
+ /note="unwinds double stranded DNA"
+ /codon_start=1
+ /transl_table=11
+ /product="replicative DNA helicase"
+ /protein_id="YP_001572403.1"
+ /db_xref="GI:161505291"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR007692"
+ /db_xref="InterPro:IPR007693"
+ /db_xref="InterPro:IPR007694"
+ /translation="MAGNKPFNKQQTDARDRDPQVAGIKVPPHSIEAEQSVLGGLMLD
+ NERWDDVAERVVAEDFYTRPHRHIFTEMGRLQESGSPIDLITLAESLERQGQLDSVGG
+ FAYLAELSKNTPSAANISAYADIVRERAVVRDMIAVAHEIADAGYDPQGRNSDELLDL
+ AESRVFQIAENRANKDEGPKSIDQILDATVARIEQLFQQPHDGVTGVDTGYQDLNKKT
+ AGLQRSDLIIVAARPSMGKTTFAMNLCENAAMLQDKPVLIFSLEMPGEQIMMRMLASL
+ SRVDQTRIRTGQLDDEDWARISGTMGILLEKRNMYIDDSSGLTPTEVRSRARRIFREH
+ GGLSLIMIDYLQLMRVPSLSDNRTLEIAEISRSLKALAKELQVPVVALSQLNRSLEQR
+ ADKRPVNSDLRESGSIEQDADLIMFIYRDEVYHENSDLKGIAEIIIGKQRNGPIGTVR
+ LTFNGQWSRFDNYAGPQYDDE"
+ misc_feature complement(3360877..3362289)
+ /locus_tag="SARI_03432"
+ /note="replicative DNA helicase; Provisional; Region:
+ PRK08006"
+ /db_xref="CDD:181193"
+ misc_feature complement(3361906..3362214)
+ /locus_tag="SARI_03432"
+ /note="DnaB-like helicase N terminal domain; Region: DnaB;
+ pfam00772"
+ /db_xref="CDD:216111"
+ misc_feature complement(3360925..3361653)
+ /locus_tag="SARI_03432"
+ /note="DnaB helicase C terminal domain. The hexameric
+ helicase DnaB unwinds the DNA duplex at the chromosome
+ replication fork. Although the mechanism by which DnaB
+ both couples ATP hydrolysis to translocation along DNA and
+ denatures the duplex is unknown, a...; Region: DnaB_C;
+ cd00984"
+ /db_xref="CDD:238484"
+ misc_feature complement(3361576..3361596)
+ /locus_tag="SARI_03432"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:238484"
+ misc_feature complement(order(3360931..3360933,3360964..3360966,
+ 3361030..3361032,3361138..3361140,3361261..3361263,
+ 3361576..3361581))
+ /locus_tag="SARI_03432"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238484"
+ misc_feature complement(3361261..3361272)
+ /locus_tag="SARI_03432"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:238484"
+ misc_feature complement(order(3360991..3360996,3361030..3361035,
+ 3361117..3361143,3361216..3361224,3361243..3361248))
+ /locus_tag="SARI_03432"
+ /note="DNA binding loops [nucleotide binding]"
+ /db_xref="CDD:238484"
+ gene 3362354..3363337
+ /locus_tag="SARI_03433"
+ CDS 3362354..3363337
+ /locus_tag="SARI_03433"
+ /inference="protein motif:HMMPanther:IPR002085"
+ /inference="protein motif:HMMPfam:IPR013149"
+ /inference="protein motif:HMMPfam:IPR013154"
+ /inference="protein motif:ScanRegExp:IPR002364"
+ /inference="protein motif:superfamily:IPR011032"
+ /inference="similar to AA sequence:INSD:CAD09229.1"
+ /note="'KEGG: sty:STY4441 8.7e-165 qor; quinone
+ oxidoreductase K00344;
+ COG: COG0604 NADPH:quinone reductase and related
+ Zn-dependent oxidoreductases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="quinone oxidoreductase, NADPH-dependent"
+ /protein_id="YP_001572404.1"
+ /db_xref="GI:161505292"
+ /db_xref="InterPro:IPR002085"
+ /db_xref="InterPro:IPR002364"
+ /db_xref="InterPro:IPR011032"
+ /db_xref="InterPro:IPR013149"
+ /db_xref="InterPro:IPR013154"
+ /translation="MATRIEFHKHGGPEVLQAVEFTPTGPAELEIQVENKAIGINFID
+ TYIRSGLYPPPALPAGLGTEAAGVVSKVGSGVEHIRVGDRVVYAQSTLGAYSSVHNVP
+ ADKIAILPDAISFEQAAASFLKGLTVFYLLRKTYQVKPDDPFLFHAAAGGVGLIACQW
+ AKALGAKLIGTVGSAQKAQRALDAGAWQVINYREESIVERVKALTDGKKVRVVYDSVG
+ KDTWEASLDCLQRRGLMVSFGNASGPVTGVNLGILNQKGSLYATRPSLQGYITTREEL
+ TEASNELFSLIASGVIKVDVAENQRYALKDARRAHEVLESRATQGSSLLIP"
+ misc_feature 3362354..3363334
+ /locus_tag="SARI_03433"
+ /note="quinone oxidoreductase, NADPH-dependent;
+ Provisional; Region: PRK10754"
+ /db_xref="CDD:182701"
+ misc_feature 3362363..3363334
+ /locus_tag="SARI_03433"
+ /note="Quinone oxidoreductase (QOR); Region: QOR2;
+ cd05286"
+ /db_xref="CDD:176189"
+ misc_feature order(3362474..3362479,3362489..3362491,3362720..3362722,
+ 3362732..3362734,3362741..3362743,3362795..3362797,
+ 3362804..3362812,3362867..3362872,3362882..3362884,
+ 3362927..3362929,3362999..3363004,3363065..3363079,
+ 3363140..3363151,3363296..3363298,3363302..3363304)
+ /locus_tag="SARI_03433"
+ /note="NADP binding site [chemical binding]; other site"
+ /db_xref="CDD:176189"
+ misc_feature order(3362756..3362758,3363044..3363049,3363086..3363103,
+ 3363125..3363148,3363155..3363160)
+ /locus_tag="SARI_03433"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:176189"
+ gene complement(3363512..3363754)
+ /gene="pspG"
+ /locus_tag="SARI_03434"
+ CDS complement(3363512..3363754)
+ /gene="pspG"
+ /locus_tag="SARI_03434"
+ /inference="similar to AA sequence:INSD:AAO71614.1"
+ /note="coordinately regulated along with pspA;
+ PspF-dependent induction in response to secretin
+ overexpression in Yersinia"
+ /codon_start=1
+ /transl_table=11
+ /product="phage shock protein G"
+ /protein_id="YP_001572405.1"
+ /db_xref="GI:161505293"
+ /translation="MLELLFVLGFFLMLMVTGVSLLGILAALVVATAVMFLGGMLALM
+ IKLLPWLLLAVAVVWVIKAVKTPKIPKYQRNNRRFY"
+ misc_feature complement(3363527..3363709)
+ /gene="pspG"
+ /locus_tag="SARI_03434"
+ /note="phage shock protein G; Reviewed; Region: pspG;
+ PRK09459"
+ /db_xref="CDD:181875"
+ gene complement(3363923..3364960)
+ /locus_tag="SARI_03435"
+ CDS complement(3363923..3364960)
+ /locus_tag="SARI_03435"
+ /inference="protein motif:HMMPfam:IPR001269"
+ /inference="protein motif:HMMPIR:IPR001269"
+ /inference="protein motif:HMMTigr:IPR004653"
+ /inference="protein motif:ScanRegExp:IPR001269"
+ /inference="similar to AA sequence:REFSEQ:AP_004550.1"
+ /note="'KEGG: ssn:SSO_4229 4.7e-173 yjbN; hypothetical
+ protein K05539;
+ COG: COG0042 tRNA-dihydrouridine synthase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="tRNA-dihydrouridine synthase A"
+ /protein_id="YP_001572406.1"
+ /db_xref="GI:161505294"
+ /db_xref="InterPro:IPR001269"
+ /db_xref="InterPro:IPR004653"
+ /translation="MHGNLEMVKTSQTSAIAENTNNHWSGRFSVAPMLDWTDRHCRYF
+ LRLLSRQTLLYTEMVTTGAIIHGKGDYLAYSEEEHPLALQLGGSDPAQLTHCAKLAEV
+ RGYDEINLNVGCPSDRVQNGMFGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDD
+ QDSYAFLCDFIDTVSGQGECEMFIIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDF
+ PHLNMSINGGIKSLEEAKEHLRHMDGVMVGREAYQNPGILAAVDREIFGADTTDADPV
+ AVVRAMYPYIERELSQGTYLGHITRHMLGLFQGIPGARQWRRYLSENAHKAGADIGVL
+ EQALKLVADKY"
+ misc_feature complement(3363929..3364909)
+ /locus_tag="SARI_03435"
+ /note="tRNA-dihydrouridine synthase A; Provisional;
+ Region: PRK11815"
+ /db_xref="CDD:236991"
+ misc_feature complement(3364163..3364882)
+ /locus_tag="SARI_03435"
+ /note="Dihydrouridine synthase-like (DUS-like) FMN-binding
+ domain. Members of this family catalyze the reduction of
+ the 5,6-double bond of a uridine residue on tRNA.
+ Dihydrouridine modification of tRNA is widely observed in
+ prokaryotes and eukaryotes, and also...; Region:
+ DUS_like_FMN; cd02801"
+ /db_xref="CDD:239200"
+ misc_feature complement(order(3364214..3364219,3364277..3364279,
+ 3364283..3364285,3364403..3364405,3364502..3364504,
+ 3364628..3364630,3364709..3364711,3364787..3364789,
+ 3364862..3364870))
+ /locus_tag="SARI_03435"
+ /note="FMN binding site [chemical binding]; other site"
+ /db_xref="CDD:239200"
+ misc_feature complement(order(3364214..3364216,3364277..3364282,
+ 3364394..3364399,3364403..3364408,3364496..3364498,
+ 3364502..3364504,3364616..3364621,3364709..3364711))
+ /locus_tag="SARI_03435"
+ /note="active site"
+ /db_xref="CDD:239200"
+ misc_feature complement(order(3364397..3364399,3364403..3364405,
+ 3364496..3364498,3364619..3364621))
+ /locus_tag="SARI_03435"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:239200"
+ misc_feature complement(order(3364277..3364282,3364394..3364396,
+ 3364406..3364408,3364502..3364504,3364616..3364618))
+ /locus_tag="SARI_03435"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:239200"
+ gene complement(3365346..3366416)
+ /locus_tag="SARI_03436"
+ CDS complement(3365346..3366416)
+ /locus_tag="SARI_03436"
+ /inference="protein motif:HMMPanther:IPR002085"
+ /inference="protein motif:HMMPfam:IPR013149"
+ /inference="protein motif:HMMPfam:IPR013154"
+ /inference="protein motif:ScanRegExp:IPR002328"
+ /inference="protein motif:superfamily:IPR011032"
+ /inference="similar to AA sequence:INSD:CAH01943.1"
+ /note="'KEGG: nme:NMB1395 6.4e-121 alcohol dehydrogenase,
+ zinc-containing K00001;
+ COG: KOG0024 Sorbitol dehydrogenase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572407.1"
+ /db_xref="GI:161505295"
+ /db_xref="InterPro:IPR002085"
+ /db_xref="InterPro:IPR002328"
+ /db_xref="InterPro:IPR011032"
+ /db_xref="InterPro:IPR013149"
+ /db_xref="InterPro:IPR013154"
+ /translation="MKAMVYYGEHDIRFEERQKPQILNSGDVIIRMIKTTICGTDLGI
+ LKGKNPEIEETALNKFGTFNGRILGHEGVGVIEEAGSSVTKFKKGDKVIISCISRCGS
+ CENCQKQLYSHCQNEGGWIMGYMIDGTQAEYVRVPYADNSLHLLPENLNEDTGVLLSD
+ ALPTGHEIGVLNGEIKPGDTVAIVGAGPVGMSCLLTSQLYSPSNIIMVDIDDNRLTMA
+ KGMGAHYTVNSVKEDAINKIMALTQQRGVDCAIEAVGIEPTWNICQSIIKEGGNLANV
+ GVHGKSVKFSIEKLWSKNMTITTGLVNTNTTGLLMNSCCSGRLQTEKLVTHHFKFNDI
+ EKAYDVFKHAANEKAMKVIIEF"
+ misc_feature complement(3365349..3366416)
+ /locus_tag="SARI_03436"
+ /note="formaldehyde dehydrogenase (FDH)-like; Region:
+ FDH_like_ADH2; cd08286"
+ /db_xref="CDD:176246"
+ misc_feature complement(3365349..3366416)
+ /locus_tag="SARI_03436"
+ /note="Threonine dehydrogenase and related Zn-dependent
+ dehydrogenases [Amino acid transport and metabolism /
+ General function prediction only]; Region: Tdh; COG1063"
+ /db_xref="CDD:223991"
+ misc_feature complement(order(3365937..3365939,3366207..3366209,
+ 3366297..3366299,3366303..3366305))
+ /locus_tag="SARI_03436"
+ /note="catalytic Zn binding site [ion binding]; other
+ site"
+ /db_xref="CDD:176246"
+ misc_feature complement(order(3366075..3366077,3366099..3366101,
+ 3366108..3366110,3366117..3366119))
+ /locus_tag="SARI_03436"
+ /note="structural Zn binding site [ion binding]; other
+ site"
+ /db_xref="CDD:176246"
+ misc_feature complement(order(3365394..3365396,3365517..3365519,
+ 3365583..3365585,3365589..3365591,3365640..3365642,
+ 3365775..3365777,3365787..3365792,3365850..3365858,
+ 3365862..3365864,3365925..3365927,3365937..3365939))
+ /locus_tag="SARI_03436"
+ /note="NAD(P) binding site [chemical binding]; other site"
+ /db_xref="CDD:176246"
+ gene complement(3366873..3368132)
+ /locus_tag="SARI_03437"
+ CDS complement(3366873..3368132)
+ /locus_tag="SARI_03437"
+ /inference="similar to AA sequence:INSD:AAL23066.1"
+ /note="'COG: NOG11280 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572408.1"
+ /db_xref="GI:161505296"
+ /translation="MAKQASAANTWAEARNDAMGGTGVASAHYGSGVLLNPALLAKAK
+ PEDTITVVLPAVGVQITDKDNLQDEIDDISDKVDYYDEVVDNLTLGQILLNPRGVLNQ
+ FQGAARDLADELEYLNGKTARANAGAGLAVSIPGQTLSVAFIAKGYAHGRVSSSIDQN
+ DIQYLRDIQHHDSIALREAGRAALLGSDEITKHLNSTASGRVAIVSDYGIALAKRFVV
+ GDVPVSIGVTPKLQKTWLYNYTTSIYNYDSSDWNSSRYRNDDTGFNVDAGVAADVGKN
+ WTLGLSGQNLVSRDIDTKDIFITNGMTRETTNYKDTYQIRPLVTAGVAWHNDLLTVSA
+ DGDLTETKGFKSEDNSQYVGVGTEVRPLSWLAARVGYRADVKNNDSNVFTGGLGFAPF
+ NRVHLDLMGLYGEDETWGAGAQLTMTF"
+ misc_feature complement(3367122..3367997)
+ /locus_tag="SARI_03437"
+ /note="F plasmid transfer operon, TraF, protein; Region:
+ TraF_2; pfam13729"
+ /db_xref="CDD:222347"
+ gene 3368430..3368945
+ /locus_tag="SARI_03438"
+ CDS 3368430..3368945
+ /locus_tag="SARI_03438"
+ /inference="protein motif:BlastProDom:IPR002481"
+ /inference="protein motif:HMMPfam:IPR002481"
+ /inference="similar to AA sequence:REFSEQ:NP_458539.1"
+ /note="'Acts as a negative controlling element, employing
+ Zn(2+) as a cofactor to bind the operator of the repressed
+ genes znuACB'"
+ /codon_start=1
+ /transl_table=11
+ /product="zinc uptake transcriptional repressor"
+ /protein_id="YP_001572409.1"
+ /db_xref="GI:161505297"
+ /db_xref="InterPro:IPR002481"
+ /translation="MEKTTTQELLAQAEKLCAQRNVRLTPQRLEVLRLMSLQQGAISA
+ YDLLDLLRETEPQAKPPTIYRALDFLLEQGFVHKVESTNSYVVCHLFDQPTHSSAMFI
+ CDRCGVVKEECAEGVEDIMHTLAAKMGFALRHNVIEAHGLCPECVEVEACRYPGECGH
+ DHSVLVKKKPR"
+ misc_feature 3368505..3368858
+ /locus_tag="SARI_03438"
+ /note="Ferric uptake regulator(Fur) and related
+ metalloregulatory proteins; typically iron-dependent,
+ DNA-binding repressors and activators; Region: Fur_like;
+ cd07153"
+ /db_xref="CDD:133478"
+ misc_feature order(3368550..3368552,3368694..3368696,3368715..3368717,
+ 3368727..3368729,3368760..3368762)
+ /locus_tag="SARI_03438"
+ /note="metal binding site 2 [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:133478"
+ misc_feature 3368604..3368648
+ /locus_tag="SARI_03438"
+ /note="putative DNA binding helix; other site"
+ /db_xref="CDD:133478"
+ misc_feature order(3368712..3368714,3368724..3368726,3368781..3368783,
+ 3368832..3368834)
+ /locus_tag="SARI_03438"
+ /note="metal binding site 1 [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:133478"
+ misc_feature order(3368733..3368741,3368787..3368792,3368817..3368825,
+ 3368829..3368855)
+ /locus_tag="SARI_03438"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:133478"
+ misc_feature order(3368736..3368738,3368745..3368747,3368856..3368858)
+ /locus_tag="SARI_03438"
+ /note="structural Zn2+ binding site [ion binding]; other
+ site"
+ /db_xref="CDD:133478"
+ gene complement(3369044..3369253)
+ /locus_tag="SARI_03439"
+ CDS complement(3369044..3369253)
+ /locus_tag="SARI_03439"
+ /inference="protein motif:HMMPfam:IPR008462"
+ /inference="similar to AA sequence:SwissProt:Q7CPB2"
+ /note="unknown function; highly abundant protein in vivo;
+ overexpressed under high NaCl concentrations; part of the
+ sigma S regulon; non-essential"
+ /codon_start=1
+ /transl_table=11
+ /product="putative stress-response protein"
+ /protein_id="YP_001572410.1"
+ /db_xref="GI:161505298"
+ /db_xref="InterPro:IPR008462"
+ /translation="MNKDEAGGNWKQFKGKMKEQWGKLTDDDMTVIEGKRDQLVGKIQ
+ ERYGYQKDQAEKEVVDWETRNNYRW"
+ misc_feature complement(3369047..3369253)
+ /locus_tag="SARI_03439"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10428"
+ /db_xref="CDD:182452"
+ gene complement(3369385..3370710)
+ /locus_tag="SARI_03440"
+ CDS complement(3369385..3370710)
+ /locus_tag="SARI_03440"
+ /inference="protein motif:HMMPfam:IPR002528"
+ /inference="protein motif:HMMTigr:IPR002528"
+ /inference="similar to AA sequence:REFSEQ:YP_153113.1"
+ /note="'COG: COG0534 Na+-driven multidrug efflux pump;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-damage-inducible SOS response protein"
+ /protein_id="YP_001572411.1"
+ /db_xref="GI:161505299"
+ /db_xref="InterPro:IPR002528"
+ /translation="MPFFTSSDKALWRLALPMIFSNITVPLLGLVDTAVIGHLDSPVY
+ LGGVAVGATATSFLFMLLLFLRMSTTGLTAQAFGAKNPRALARALVQPLLLALGAGMM
+ IALFRTPLIELALHIVGGNDAVLVQARRFLEIRWLSAPASLANLVLLGWLLGVQYARA
+ PVILLVVGNILNIALDLCLVMGLHMNVQGAALATVIAEYATLLIGLIMVRRVLHLRGV
+ SLDMLKQAWRGNVRRLLALNRDIMLRSLLLQLCFGAITVLGARLGSDIIAVNAVLMTL
+ LTFTAYALDGFAYAVEAHSGQAYGARDGSKLLEVWRAACRQSGIVALLFSTVYALAGG
+ HIVALLTSLPQIQLLADRYLIWQVILPLVGVWCYLLDGMFIGATRAAEMRNSMAVAAG
+ GFALTLLALPLSGNHVLWLALTVFLALRGLSLAFIWRRHWRDGTWFVKS"
+ misc_feature complement(3369388..3370710)
+ /locus_tag="SARI_03440"
+ /note="DNA-damage-inducible SOS response protein;
+ Provisional; Region: PRK10367"
+ /db_xref="CDD:182413"
+ misc_feature complement(3369421..3370692)
+ /locus_tag="SARI_03440"
+ /note="DinF and similar proteins, a subfamily of the
+ multidrug and toxic compound extrusion (MATE)-like
+ proteins; Region: MATE_DinF_like; cd13136"
+ /db_xref="CDD:240541"
+ gene complement(3370890..3371498)
+ /locus_tag="SARI_03441"
+ CDS complement(3370890..3371498)
+ /locus_tag="SARI_03441"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR006198"
+ /inference="protein motif:HMMPfam:IPR006199"
+ /inference="protein motif:HMMTigr:IPR006200"
+ /inference="protein motif:superfamily:IPR011056"
+ /inference="similar to AA sequence:INSD:AAV79800.1"
+ /note="Represses a number of genes involved in the
+ response to DNA damage"
+ /codon_start=1
+ /transl_table=11
+ /product="LexA repressor"
+ /protein_id="YP_001572412.1"
+ /db_xref="GI:161505300"
+ /db_xref="InterPro:IPR006198"
+ /db_xref="InterPro:IPR006199"
+ /db_xref="InterPro:IPR006200"
+ /db_xref="InterPro:IPR011056"
+ /db_xref="InterPro:IPR011991"
+ /translation="MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAE
+ EHLKALARKGVLEIVSGASRGIRLLQEEEDGLPLVGRVAAGEPLLAQQHIEGHYQVDP
+ SLFKPSADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKK
+ QGNKVELLPENSEFTPIVVDLREQSFTIEGLAVGVIRNGEWL"
+ misc_feature complement(3370902..3371492)
+ /locus_tag="SARI_03441"
+ /note="LexA repressor; Validated; Region: PRK00215"
+ /db_xref="CDD:234688"
+ misc_feature complement(3371304..3371492)
+ /locus_tag="SARI_03441"
+ /note="LexA DNA binding domain; Region: LexA_DNA_bind;
+ pfam01726"
+ /db_xref="CDD:201938"
+ misc_feature complement(3370950..3371168)
+ /locus_tag="SARI_03441"
+ /note="Peptidase S24 LexA-like proteins are involved in
+ the SOS response leading to the repair of single-stranded
+ DNA within the bacterial cell. This family includes: the
+ lambda repressor CI/C2 family and related bacterial
+ prophage repressor proteins; LexA (EC...; Region:
+ S24_LexA-like; cd06529"
+ /db_xref="CDD:119397"
+ misc_feature complement(order(3371031..3371033,3371142..3371144))
+ /locus_tag="SARI_03441"
+ /note="Catalytic site [active]"
+ /db_xref="CDD:119397"
+ gene complement(3371607..3371975)
+ /locus_tag="SARI_03442"
+ CDS complement(3371607..3371975)
+ /locus_tag="SARI_03442"
+ /inference="protein motif:BlastProDom:IPR000829"
+ /inference="protein motif:HMMPfam:IPR000829"
+ /inference="protein motif:ScanRegExp:IPR000829"
+ /inference="similar to AA sequence:INSD:CAD09220.1"
+ /note="'KEGG: sty:STY4432 4.3e-60 dgkA; diacylglycerol
+ kinase K00901;
+ COG: COG0818 Diacylglycerol kinase;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="diacylglycerol kinase"
+ /protein_id="YP_001572413.1"
+ /db_xref="GI:161505301"
+ /db_xref="InterPro:IPR000829"
+ /translation="MANNTTGFTRIIKAAGYSWKGFRAAWTHEAAFRQESLAVLLGVI
+ IACWLDVDAITRVLLIGSVLLIMIVEILNSAIEAVVDRIGSEYHELSGRAKDMGSAAV
+ LLSIFVALMTWGILLWSHFR"
+ misc_feature complement(3371613..3371975)
+ /locus_tag="SARI_03442"
+ /note="Diacylglycerol kinase [Cell envelope biogenesis,
+ outer membrane]; Region: DgkA; COG0818"
+ /db_xref="CDD:223888"
+ gene 3372145..3374565
+ /locus_tag="SARI_03443"
+ CDS 3372145..3374565
+ /locus_tag="SARI_03443"
+ /inference="protein motif:HMMPfam:IPR002123"
+ /inference="protein motif:HMMPIR:IPR012082"
+ /inference="protein motif:HMMPIR:IPR012124"
+ /inference="protein motif:HMMSmart:IPR002123"
+ /note="PlsB; catalyzes the formation of 1-acyl-sn-glycerol
+ 3-phosphate by transfering the acyl moiety from acyl-CoA"
+ /codon_start=1
+ /transl_table=11
+ /product="glycerol-3-phosphate acyltransferase"
+ /protein_id="YP_001572414.1"
+ /db_xref="GI:161505302"
+ /db_xref="InterPro:IPR002123"
+ /db_xref="InterPro:IPR012082"
+ /db_xref="InterPro:IPR012124"
+ /translation="MSGWPRIYYKLLNLPLSILVKSKSIPAEPAQELGLDTSRPIMYV
+ LPYNSKADLLTLRAQCLAHDLPDPLEPLEIDGALLPRYVFIHGGPRVFTYYTPKEESV
+ KLFHDYLDLHRGNPALDVQMVPVSVMFGRAPGREKGEVNPPLRMLNGVQKFFAISWLG
+ RDSFVRFSPSVSLRRMADEHGTDKIIAQKLARVARMHFARQRLAAVGPRLPARQDLFN
+ KLLASKAIARAVEDEARSKKISHEKAQQNAIALMEEIAANFSYEMIRLTDRILGFTWN
+ RLYQGINVHNAERVRQLAHDGHEIVYVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGIN
+ LNFWPAGPIFRRLGAFFIRRTFKGNKLYSTVFREYLGELFSRGYSVEYFVEGGRSRTG
+ RLLDPKTGTLSMTIQAMLRGGTRPITLVPIYIGYEHVMEVGTYAKELRGATKEKESLP
+ QMLRGLSKLRNLGQGYVNFGEPMPLMTYLNQHVPEWRESIDPIEAIRPAWLTPTVNSI
+ AADLMVRINNAGAANAMNLCCTALLASRQRSLTREQLTEQLDCYLDLMRNVPYSTDST
+ VPAASAGELIDHALQMNKFEAEKDTIGDIIILPREQAVLMTYYRNNIAHMLIMPSLMA
+ AIITQHRRISRDALQQHVEALYPMLKAELFLRWEREELASVIDALASEMQRQGLITLQ
+ DNELHINPAHSRTLQLLAAGARETLQRYAITFWLLSANPSINRSTLEKESRTVAQRLS
+ VLHGINAPEFFDKAVFSSLVLTLRDEGYISDTGDAEPAETMKIYQMLADLITSDVRLT
+ IESATQGE"
+ misc_feature 3372175..3374541
+ /locus_tag="SARI_03443"
+ /note="glycerol-3-phosphate O-acyltransferase; Region:
+ plsB; TIGR03703"
+ /db_xref="CDD:234317"
+ misc_feature 3372979..3373584
+ /locus_tag="SARI_03443"
+ /note="Lysophospholipid Acyltransferases (LPLATs) of
+ Glycerophospholipid Biosynthesis: GPAT-like; Region:
+ LPLAT_DHAPAT-like; cd07993"
+ /db_xref="CDD:153255"
+ misc_feature order(3373060..3373062,3373069..3373071,3373075..3373077,
+ 3373138..3373149,3373300..3373308)
+ /locus_tag="SARI_03443"
+ /note="putative acyl-acceptor binding pocket; other site"
+ /db_xref="CDD:153255"
+ gene complement(3374664..3375536)
+ /gene="ubiA"
+ /locus_tag="SARI_03444"
+ CDS complement(3374664..3375536)
+ /gene="ubiA"
+ /locus_tag="SARI_03444"
+ /inference="protein motif:HMMPfam:IPR000537"
+ /inference="protein motif:HMMTigr:IPR006370"
+ /inference="protein motif:ScanRegExp:IPR000537"
+ /inference="similar to AA sequence:SwissProt:Q57GZ3"
+ /note="'catalyzes the conversion of 4-Hydroxybenzoate into
+ 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone
+ biosynthesis pathway'"
+ /codon_start=1
+ /transl_table=11
+ /product="4-hydroxybenzoate octaprenyltransferase"
+ /protein_id="YP_001572415.1"
+ /db_xref="GI:161505303"
+ /db_xref="InterPro:IPR000537"
+ /db_xref="InterPro:IPR006370"
+ /translation="MEWSLTQSKLLAFHRLMRTDKPIGALLLLWPTLWALWVATPGMP
+ QLWILAVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTVNRPLPSGAVTEKEARNLFVV
+ LVLLAFLLVMTLNVMTILLSVAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAA
+ VSESLPLSCWLMFLANILWAVAYDTQYAMVDRDDDIKIGIKSTAILFGRYDKLIIGIL
+ QLGVMALMALIGWLNGLGGGYYWAVLVAGALFAYQQKLIANREREACFKAFMNNNYVG
+ LVLFLGLAMSYWHF"
+ misc_feature complement(3374676..3375521)
+ /gene="ubiA"
+ /locus_tag="SARI_03444"
+ /note="4-hydroxybenzoate octaprenyltransferase; Reviewed;
+ Region: ubiA; PRK12848"
+ /db_xref="CDD:237229"
+ misc_feature complement(3374727..3375416)
+ /gene="ubiA"
+ /locus_tag="SARI_03444"
+ /note="UbiA prenyltransferase family; Region: UbiA;
+ pfam01040"
+ /db_xref="CDD:216260"
+ gene complement(3375550..3376047)
+ /gene="ubiC"
+ /locus_tag="SARI_03445"
+ CDS complement(3375550..3376047)
+ /gene="ubiC"
+ /locus_tag="SARI_03445"
+ /inference="protein motif:HMMPfam:IPR007440"
+ /inference="similar to AA sequence:REFSEQ:YP_153108.1"
+ /note="catalyzes the formation of 4-hydroxybenzoate from
+ chorismate"
+ /codon_start=1
+ /transl_table=11
+ /product="chorismate pyruvate lyase"
+ /protein_id="YP_001572416.1"
+ /db_xref="GI:161505304"
+ /db_xref="InterPro:IPR007440"
+ /translation="MSHPALTQLRALRYFDAIPALEPHLRDWLLLEDSMTKRFEQQGK
+ RVSVTLIREAFVGQSEVEEASGLLPSEARYWLREILLCADGEPWLAGRTVVPESTLCG
+ PEQVLQHLGRTPLGRYLFTSSTLTRDFIEIGRDATLWGRRSRLRLSGKPLLLTELFLP
+ ASPLY"
+ misc_feature complement(3375553..3376047)
+ /gene="ubiC"
+ /locus_tag="SARI_03445"
+ /note="chorismate pyruvate lyase; Provisional; Region:
+ ubiC; PRK11655"
+ /db_xref="CDD:236949"
+ gene complement(3376228..3377145)
+ /locus_tag="SARI_03446"
+ CDS complement(3376228..3377145)
+ /locus_tag="SARI_03446"
+ /inference="protein motif:HMMPfam:IPR010794"
+ /inference="similar to AA sequence:REFSEQ:NP_458530.1"
+ /note="'COG: NOG06298 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="maltose regulon periplasmic protein"
+ /protein_id="YP_001572417.1"
+ /db_xref="GI:161505305"
+ /db_xref="InterPro:IPR010794"
+ /translation="MKMKKSLVALCLTAGLFASVPGISLAEVNYVPQNTSAAPAIPAA
+ ALQQLTWTPVDQSKTQSTQLATGGQRLEVAGITGPVAAYSVPANIGELTLTLTSEVNK
+ QASVFAPNVLILDQNMTPSAFFPSSYFTYQQPGVMSADRLEGVMRLTPALGQQKLYVL
+ VFTTEKDLQQTTTLLDPAKAYAKGVGNSIPDIPDPVARHTTDGVVKLKVKTNSSSSVL
+ VGPLFGSSGTGPVTVGNTAAPVAAPAPVAPKKSEPMLNDTESYFNKAIKDAVAKGDVD
+ KALKLLDEAERLGSTSARSTFISSVKGKG"
+ misc_feature complement(3376231..3377142)
+ /locus_tag="SARI_03446"
+ /note="maltose regulon periplasmic protein; Provisional;
+ Region: PRK10564"
+ /db_xref="CDD:236716"
+ gene complement(3377309..3378685)
+ /gene="lamB"
+ /locus_tag="SARI_03447"
+ CDS complement(3377309..3378685)
+ /gene="lamB"
+ /locus_tag="SARI_03447"
+ /inference="protein motif:BlastProDom:IPR003192"
+ /inference="protein motif:Gene3D:IPR003192"
+ /inference="protein motif:HMMPfam:IPR003192"
+ /inference="similar to AA sequence:INSD:CAD09215.1"
+ /note="porin involved in the transport of maltose and
+ maltodextrins"
+ /codon_start=1
+ /transl_table=11
+ /product="maltoporin"
+ /protein_id="YP_001572418.1"
+ /db_xref="GI:161505306"
+ /db_xref="InterPro:IPR003192"
+ /translation="MISGDRMMITLRKLPLAVAVAAGVMSAQAMAVDFHGYARSGIGW
+ TGSGGEQQCFQVTGAQSKYRLGNECETYAELKLGQEVWKEGDKSFYFDTNVAYSVNQQ
+ NDWESTDPAFREANVQGKNLIEWLPGSTIWAGKRFYQRHDVHMIDFYYWDISGPGAGI
+ ENIDLGFGKLSLAATRSTEAGGSYTFSSQNIYDQVKDTANDVFDVRLAGLQTNPDGVL
+ ELGVDYGRANTTDGYKLADGASKDGWMFTAEHTQSMLKGYNKFVVQYAIDAMTTQGKG
+ QARGSDGSSSFTEVLPDGTKINYANKVINNNGDMWRILDHGAISLGDKWDLMYVGMYQ
+ NIDWDNNLGTEWWTVGVRPMYKWTPIMSTLLEVGYDNVKSQQTGDRNNQYKITLAQQW
+ QAGDSIWSRPAIRIFATYAKWDEKWGYIKDGDNISRYAAAANSGISTNSLGDSDEWTF
+ GAQMEIWW"
+ misc_feature complement(3377312..3378592)
+ /gene="lamB"
+ /locus_tag="SARI_03447"
+ /note="The Maltoporin-like channels (LamB porin) form a
+ trimeric structure which facilitate the diffusion of
+ maltodextrins and other sugars across the outer membrane
+ of Gram-negative bacteria. The membrane channel is formed
+ by an 18-strand antiparallel...; Region: Maltoporin-like;
+ cd01346"
+ /db_xref="CDD:238656"
+ misc_feature complement(order(3377312..3377314,3377318..3377320,
+ 3377324..3377326,3377330..3377332,3377474..3377476,
+ 3377480..3377482,3377507..3377512,3377606..3377608,
+ 3378083..3378085,3378089..3378091,3378152..3378166,
+ 3378212..3378226,3378275..3378277,3378281..3378289,
+ 3378293..3378295,3378329..3378331,3378335..3378343,
+ 3378347..3378352,3378389..3378391,3378395..3378403,
+ 3378413..3378415,3378419..3378421,3378467..3378475,
+ 3378554..3378562,3378566..3378568,3378584..3378586))
+ /gene="lamB"
+ /locus_tag="SARI_03447"
+ /note="trimer interface; other site"
+ /db_xref="CDD:238656"
+ misc_feature complement(order(3378230..3378232,3378239..3378241,
+ 3378245..3378247,3378266..3378268,3378275..3378277,
+ 3378347..3378349,3378464..3378466,3378470..3378472,
+ 3378569..3378571))
+ /gene="lamB"
+ /locus_tag="SARI_03447"
+ /note="sugar binding site [chemical binding]; other site"
+ /db_xref="CDD:238656"
+ gene complement(3378767..3379876)
+ /locus_tag="SARI_03448"
+ CDS complement(3378767..3379876)
+ /locus_tag="SARI_03448"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMPfam:IPR013611"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="protein motif:superfamily:IPR008995"
+ /inference="similar to AA sequence:INSD:AAX68015.1"
+ /note="with malEFG is involved in import of
+ maltose/maltodextrin"
+ /codon_start=1
+ /transl_table=11
+ /product="maltose/maltodextrin transporter ATP-binding
+ protein"
+ /protein_id="YP_001572419.1"
+ /db_xref="GI:161505307"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR008995"
+ /db_xref="InterPro:IPR013611"
+ /translation="MASVQLRNVTKAWDDVVVSKDINLDIHDGEFVVFVGPSGCGKST
+ LLRMIAGLETITHGDLFIGETRMNDIPPAERGVGMVFQSYALYPHLSVAENMSFGLKL
+ AGAKKEVMNQRVNQVAEVLQLAHLLERKPKALSGGQRQRVAIGRTLVAEPRVFLLDEP
+ LSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKP
+ LELYHYPADRFVAGFIGSPKMNFLPVKVTATAIEQVQVELPNRQQIWLPVESRGVQVG
+ ANMSLGIRPEHLLPSDIADVTLEGEVQVVEQLGHETQIHIQIPAIRQNLVYRQNDVVL
+ VEEGATFAIGLPPERCHLFREDGSACRRLHQEPGV"
+ misc_feature complement(3378770..3379876)
+ /locus_tag="SARI_03448"
+ /note="maltose/maltodextrin transporter ATP-binding
+ protein; Provisional; Region: PRK11000"
+ /db_xref="CDD:182893"
+ misc_feature complement(3379229..3379867)
+ /locus_tag="SARI_03448"
+ /note="The N-terminal ATPase domain of the maltose
+ transporter, MalK; Region: ABC_MalK_N; cd03301"
+ /db_xref="CDD:213268"
+ misc_feature complement(3379748..3379771)
+ /locus_tag="SARI_03448"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213268"
+ misc_feature complement(order(3379301..3379303,3379400..3379405,
+ 3379631..3379633,3379745..3379753,3379757..3379762))
+ /locus_tag="SARI_03448"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213268"
+ misc_feature complement(3379631..3379642)
+ /locus_tag="SARI_03448"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213268"
+ misc_feature complement(3379448..3379477)
+ /locus_tag="SARI_03448"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213268"
+ misc_feature complement(3379400..3379417)
+ /locus_tag="SARI_03448"
+ /note="Walker B; other site"
+ /db_xref="CDD:213268"
+ misc_feature complement(3379382..3379393)
+ /locus_tag="SARI_03448"
+ /note="D-loop; other site"
+ /db_xref="CDD:213268"
+ misc_feature complement(3379295..3379315)
+ /locus_tag="SARI_03448"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213268"
+ misc_feature complement(3378818..3379036)
+ /locus_tag="SARI_03448"
+ /note="TOBE domain; Region: TOBE_2; pfam08402"
+ /db_xref="CDD:219823"
+ gene complement(3379892..3380098)
+ /locus_tag="SARI_03449"
+ CDS complement(3379892..3380098)
+ /locus_tag="SARI_03449"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572420.1"
+ /db_xref="GI:161505308"
+ /translation="MRVGAHKNTPIFADGITKFLFCPRPWSQARRTHPPASSPIKKPG
+ VEDLRQPGIAHSQAIMNVAVNDRL"
+ gene 3380228..3381427
+ /gene="malE"
+ /locus_tag="SARI_03450"
+ CDS 3380228..3381427
+ /gene="malE"
+ /locus_tag="SARI_03450"
+ /inference="protein motif:HMMPfam:IPR006059"
+ /inference="protein motif:ScanRegExp:IPR006061"
+ /inference="similar to AA sequence:REFSEQ:NP_463094.1"
+ /note="functions in the MalKFGE ABC transporter complex to
+ transport maltose into the cell by using ATP hydrolysis"
+ /codon_start=1
+ /transl_table=11
+ /product="maltose ABC transporter periplasmic protein"
+ /protein_id="YP_001572421.1"
+ /db_xref="GI:161505309"
+ /db_xref="InterPro:IPR006059"
+ /db_xref="InterPro:IPR006061"
+ /translation="MGDMKIKTGVGILALSALTTMMISAPALAKIEEGKLVIWINGDK
+ GYNGLADVGKKFEQDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQS
+ GLLAEITPDKAFQNKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLVPNPPKTWEE
+ IPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKFENGKYDVKDVGVDNAGAK
+ AGLTFLIDMIKNKNMSADTDYSIAEAAFNKGETAMTINGPWAWSNIDKSKVNYGVTLL
+ PTFKGKSSKPFVGVLSAGVNAASPNKELAKEFLENYLLTDQGLEAVNKDKPLGAVALK
+ SFQGQLAKDPRIAATMDNAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDAALKD
+ AQGRITK"
+ misc_feature 3380237..3381424
+ /gene="malE"
+ /locus_tag="SARI_03450"
+ /note="maltose ABC transporter periplasmic protein;
+ Reviewed; Region: malE; PRK09474"
+ /db_xref="CDD:236533"
+ misc_feature 3380240..>3380425
+ /gene="malE"
+ /locus_tag="SARI_03450"
+ /note="Domain of unknown function (DUF4179); Region:
+ DUF4179; pfam13786"
+ /db_xref="CDD:222379"
+ misc_feature 3380363..3381181
+ /gene="malE"
+ /locus_tag="SARI_03450"
+ /note="Bacterial extracellular solute-binding protein;
+ Region: SBP_bac_1; pfam01547"
+ /db_xref="CDD:216563"
+ gene 3381440..3381616
+ /locus_tag="SARI_03451"
+ CDS 3381440..3381616
+ /locus_tag="SARI_03451"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572422.1"
+ /db_xref="GI:161505310"
+ /translation="MPDGGINALSGLQHTVGLISAAPSGTSPARKFQRCRGKPPWMSL
+ KRNIGGKATDSNGQ"
+ gene 3381559..3383103
+ /gene="malF"
+ /locus_tag="SARI_03452"
+ CDS 3381559..3383103
+ /gene="malF"
+ /locus_tag="SARI_03452"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="similar to AA sequence:REFSEQ:YP_219094.1"
+ /note="with MalKGE is involved in maltose transport into
+ the cell"
+ /codon_start=1
+ /transl_table=11
+ /product="maltose transporter membrane protein"
+ /protein_id="YP_001572423.1"
+ /db_xref="GI:161505311"
+ /db_xref="InterPro:IPR000515"
+ /translation="MDVIKKKHWRQSDRLKWSVIGFLGLLVGYLVVLMYVQGEYLFAI
+ MTLILSSAGLYIFANRKTYAWRYVYPGLAGMGLFVLFPLVCTIAIAFTNYSSTNQLTF
+ ERAQQVLMDRSYQAGKTYNFGLYPAGDEWQLALTDGETGKNYLSDAFSFGGEQKLQLK
+ ETDTLPGSERANLRIITQNRLALNQITAVLPDESKVIMSSLRQFSGTRPLYTLADDGL
+ LTNNQSGVKYRPNNDIGYYQSINADGSWGDEKLSPGYTVTIGAKNFTRVFTDDGIQKP
+ FFAIFVWTVVFSVLTVALTVAVGMVLACLVQWEALKGKAIYRVLLILPYAVPSFISIL
+ IFKGLFNQSFGEINMMLGALFGIKPAWFSDPNTARAMVIIVNTWLGYPYMMILCMGLL
+ KAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNG
+ GPDRLGTTTPAGYTDLLVSYTYRIAFEGGGGQDFGLAAAIATLIFLLVGALAIVNLKA
+ TRMKFD"
+ misc_feature 3382399..3382929
+ /gene="malF"
+ /locus_tag="SARI_03452"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature order(3382447..3382452,3382459..3382464,3382477..3382479,
+ 3382507..3382518,3382522..3382551,3382558..3382563,
+ 3382612..3382614,3382687..3382692,3382696..3382698,
+ 3382705..3382707,3382714..3382719,3382723..3382725,
+ 3382735..3382740,3382747..3382749,3382798..3382800,
+ 3382840..3382845,3382852..3382854,3382873..3382884,
+ 3382891..3382896)
+ /gene="malF"
+ /locus_tag="SARI_03452"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(3382525..3382563,3382609..3382614,3382873..3382890)
+ /gene="malF"
+ /locus_tag="SARI_03452"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(3382612..3382614,3382672..3382674,3382891..3382893,
+ 3382927..3382929)
+ /gene="malF"
+ /locus_tag="SARI_03452"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(3382750..3382788,3382804..3382809,3382819..3382821)
+ /gene="malF"
+ /locus_tag="SARI_03452"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene 3383118..3384008
+ /gene="malG"
+ /locus_tag="SARI_03453"
+ CDS 3383118..3384008
+ /gene="malG"
+ /locus_tag="SARI_03453"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="similar to AA sequence:REFSEQ:NP_458525.1"
+ /note="with MalKFE is involved in the transport of maltose
+ into the cell"
+ /codon_start=1
+ /transl_table=11
+ /product="maltose transporter permease"
+ /protein_id="YP_001572424.1"
+ /db_xref="GI:161505312"
+ /db_xref="InterPro:IPR000515"
+ /translation="MAMVQPKSQKLRLFITHLGLLIFIAAIMFPLLMVIAISLREGNF
+ ATGSLIPDKISWEHWRLALGFSVEHADGRVTPPPFPVLLWLWNSVKIAGITAIGIVAL
+ STTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLNTHG
+ GVIFAYLGGIALHVWTIKGYFETIDGSLEEAAALDGATPWQAFRLVLLPLSVPILAVV
+ FILSFIAAITEVPVASLLLRDVDSYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITL
+ VFLLAQRWLVNGLTAGGVKG"
+ misc_feature 3383139..3384002
+ /gene="malG"
+ /locus_tag="SARI_03453"
+ /note="ABC-type sugar transport system, permease component
+ [Carbohydrate transport and metabolism]; Region: UgpE;
+ COG0395"
+ /db_xref="CDD:223472"
+ misc_feature 3383370..3383939
+ /gene="malG"
+ /locus_tag="SARI_03453"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature order(3383418..3383423,3383430..3383435,3383448..3383450,
+ 3383478..3383489,3383493..3383522,3383529..3383534,
+ 3383538..3383540,3383616..3383621,3383625..3383627,
+ 3383631..3383633,3383640..3383645,3383649..3383651,
+ 3383661..3383666,3383673..3383675,3383724..3383726,
+ 3383766..3383771,3383778..3383780,3383799..3383810,
+ 3383817..3383822,3383859..3383864,3383892..3383897,
+ 3383904..3383909,3383913..3383918,3383925..3383930,
+ 3383937..3383939)
+ /gene="malG"
+ /locus_tag="SARI_03453"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(3383496..3383540,3383799..3383816)
+ /gene="malG"
+ /locus_tag="SARI_03453"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(3383538..3383540,3383601..3383603,3383817..3383819,
+ 3383853..3383855,3383862..3383864,3383892..3383894)
+ /gene="malG"
+ /locus_tag="SARI_03453"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(3383676..3383714,3383730..3383735,3383745..3383747)
+ /gene="malG"
+ /locus_tag="SARI_03453"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene 3384072..3384251
+ /locus_tag="SARI_03454"
+ CDS 3384072..3384251
+ /locus_tag="SARI_03454"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572425.1"
+ /db_xref="GI:161505313"
+ /translation="MVVFRRSSERLFYASQAADGFMLFGNAVMIIFFCASYHGKYITK
+ FIFDTLNRIKITEKI"
+ gene 3384351..3385826
+ /gene="xylE"
+ /locus_tag="SARI_03455"
+ CDS 3384351..3385826
+ /gene="xylE"
+ /locus_tag="SARI_03455"
+ /inference="protein motif:FPrintScan:IPR003663"
+ /inference="protein motif:HMMPfam:IPR005828"
+ /inference="protein motif:HMMTigr:IPR003663"
+ /inference="protein motif:ScanRegExp:IPR005829"
+ /inference="similar to AA sequence:INSD:"
+ /note="xylose/proton symporter; member of the major
+ facilitator superfamily (MFS) of transporter"
+ /codon_start=1
+ /transl_table=11
+ /product="D-xylose transporter XylE"
+ /protein_id="YP_001572426.1"
+ /db_xref="GI:161505314"
+ /db_xref="InterPro:IPR003663"
+ /db_xref="InterPro:IPR005828"
+ /db_xref="InterPro:IPR005829"
+ /translation="MNTQYNSRYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVA
+ PQQLSESAANSLLGFCVASALIGCIIGGAIGGYCSNRFGRRDSLKIAALLFFISGVGS
+ AWPELGFTTINPDNAVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIR
+ GKLVSFNQFAIIFGQLLVYCVNYFIAKSGDATWLNSNGWRYMFASECIPALLFLLLLY
+ TVPESPRWLMARGRNDQAENILRKIMGTSLAALAVQEINLSLQHGRKTGGRLLMFGAG
+ VIAIGVMLSVFQQFVGINVVLYYAPEVFKTLGASTDVALLQTIIVGVINLSFTVLAIM
+ TVDKFGRKPLQIIGALGMALGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCW
+ VLLAEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGV
+ MGVLAAVFMWKFVPETKGKTLEELEELWTPAEEKAPKAAIQ"
+ misc_feature 3384351..3385742
+ /gene="xylE"
+ /locus_tag="SARI_03455"
+ /note="D-xylose transporter XylE; Provisional; Region:
+ xylE; PRK10077"
+ /db_xref="CDD:182225"
+ misc_feature <3385158..3385739
+ /gene="xylE"
+ /locus_tag="SARI_03455"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ gene complement(3385872..3386282)
+ /locus_tag="SARI_03456"
+ CDS complement(3385872..3386282)
+ /locus_tag="SARI_03456"
+ /inference="protein motif:HMMPfam:IPR009315"
+ /inference="similar to AA sequence:SwissProt:Q5PL02"
+ /note="'COG: COG3223 Predicted membrane protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphate-starvation-inducible protein PsiE"
+ /protein_id="YP_001572427.1"
+ /db_xref="GI:161505315"
+ /db_xref="InterPro:IPR009315"
+ /translation="MMSLSRSHLELIATILQNVLNLGLLTLGLILVLFLGKETVHLAD
+ ALFVPEQASKYELVEGLVIYFLYFEFIALIVKYFKSGFHFPLRYFVYIGITAIVRLII
+ VDHKTPMDVLLYSAAILLLVITLWLCNSNRLRRE"
+ misc_feature complement(3385875..>3386177)
+ /locus_tag="SARI_03456"
+ /note="phosphate-starvation-inducible protein PsiE;
+ Provisional; Region: PRK02833"
+ /db_xref="CDD:235075"
+ gene complement(3386424..3388520)
+ /locus_tag="SARI_03457"
+ CDS complement(3386424..3388520)
+ /locus_tag="SARI_03457"
+ /inference="protein motif:HMMPfam:IPR010344"
+ /note="'COG: NOG06257 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572428.1"
+ /db_xref="GI:161505316"
+ /db_xref="InterPro:IPR010344"
+ /translation="MKKTHLLSVLALGISAACHAETYPAPIGPSQSDFGGVGLLQTPT
+ ARMAREGEMSLNYRDNDQYRYYSASVQLFPWLETTLRYTDVRTKKYSSVESFSGDQTY
+ KDKAFDVKLRLWEESYWMPQVAVGARDIGGTGLFDAEYIVASKAWGPFDFSLGLGWGY
+ LGASGNVSNPFCSYSDKFCSRDNSYKEAGSVDGSDMFHGPASLFGGVEYQTPWQPLRL
+ KLEYEGNNYQHDFAGKLEQKSKFNVGALYRVTDWADVNLSYERGNTVMFGVTLRTNFN
+ DLRPSYNDNSRPQYRPQPQDAILQHSVVANQLTLLKYNAGLADPKIQVKGDTLYVTGE
+ QVKYRDAREGIVRANRIVMNDLPEGIRTIRVTENRLNLPQVTTETNVASLKRHLEGEP
+ LGHETPLAQKRVEPIVPESTEQGWYIDKSRLDFHLDPVLSQSVGGPENFYMYQLGVMG
+ TADLWVTDHLLTTGSVFANIANNYDKFNYTNPPKDSHLPRVRTHVREYVQNDVYVNNL
+ QANYFQYFGNGFYGQVYGGYLETMFGGAGAEVLYRPVDSNWAFGLDANYVKQRDWRSA
+ QDMMKSTDYSVKTGHLTAYWTPSFAQDVLVKASVGQYLAGDKGGTMEIAKRFDSGVVV
+ GGYATITDASPDEYGEGDFTKGVYISVPLDLFSSGPTRSRAAIGWTPLTRDGGQQLGR
+ KFGLYDMTSDRNVNFR"
+ misc_feature complement(3386442..3388436)
+ /locus_tag="SARI_03457"
+ /note="Bacterial putative lipoprotein (DUF940); Region:
+ DUF940; pfam06082"
+ /db_xref="CDD:218886"
+ gene complement(3388520..3389257)
+ /locus_tag="SARI_03458"
+ CDS complement(3388520..3389257)
+ /locus_tag="SARI_03458"
+ /inference="protein motif:HMMPfam:IPR010425"
+ /inference="similar to AA sequence:INSD:CAD09208.1"
+ /note="'COG: NOG06780 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572429.1"
+ /db_xref="GI:161505317"
+ /db_xref="InterPro:IPR010425"
+ /translation="MMKRTISALALAFVASSAFASGTVTVFIKGHNEPKTLTDAGRLL
+ DLVGQPRLATSWWPAAVIGEEKATATARQQQQELLGRLAALSTEENGDAAAAINALRR
+ QIQAVKVTGRQFVNLDPDVVRVSERGNPPLQGNYTLWVGPQPTQITLFGLISRPGSQP
+ FIPGRDVASYLDGQRLLSGADRSYAWVVYPDGRSQKAPVAYWNKRHIEPMPGSIIFVG
+ FASSRWRGTPEAINADTLHTLTQRIPE"
+ misc_feature complement(3388526..3389194)
+ /locus_tag="SARI_03458"
+ /note="Capsule biosynthesis GfcC; Region: Caps_synth_GfcC;
+ pfam06251"
+ /db_xref="CDD:218957"
+ gene complement(3389254..3389922)
+ /locus_tag="SARI_03459"
+ CDS complement(3389254..3389922)
+ /locus_tag="SARI_03459"
+ /inference="similar to AA sequence:REFSEQ:YP_219089.1"
+ /note="'COG: NOG06220 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572430.1"
+ /db_xref="GI:161505318"
+ /translation="MVILPLWRSVVKRPALILICLLLQACSATTKGLGNSLWDSLFGT
+ SGVQLTDDDIQNMPYASQYMQLNGGPQLFVALAFSENGQQKWVTQDGATIVTQHGRLV
+ KTQLGGDNLIDVNNLAADPLAKPGQIVDGVTWTRTLGWTEHRQVRYAAARSIFTWQGT
+ DSVSVGSEDTAVRVLDEEVMTDQTRWRNRYWVDSEGQIRQSEQYLGANYFPVKTTLIK
+ AAKS"
+ misc_feature complement(3389272..3389844)
+ /locus_tag="SARI_03459"
+ /note="Protein of unknown function (DUF2886); Region:
+ DUF2886; pfam11102"
+ /db_xref="CDD:220980"
+ gene complement(3389956..3390201)
+ /locus_tag="SARI_03460"
+ CDS complement(3389956..3390201)
+ /locus_tag="SARI_03460"
+ /inference="similar to AA sequence:INSD:AAL23046.1"
+ /note="'COG: NOG14141 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572431.1"
+ /db_xref="GI:161505319"
+ /translation="MMKKVLYGIFAITALAATSVSAAPVQVGEAAGSAATSVSAGSSS
+ ATRVSTVSSAVGVALAATGGGDGSNTGTTTTTTTSTQ"
+ gene complement(3390642..3392291)
+ /gene="pgi"
+ /locus_tag="SARI_03461"
+ CDS complement(3390642..3392291)
+ /gene="pgi"
+ /locus_tag="SARI_03461"
+ /inference="protein motif:FPrintScan:IPR001672"
+ /inference="protein motif:HMMPanther:IPR001672"
+ /inference="protein motif:HMMPfam:IPR001672"
+ /inference="protein motif:ScanRegExp:IPR001672"
+ /inference="similar to AA sequence:INSD:AAL23045.1"
+ /note="functions in sugar metabolism in glycolysis and the
+ Embden-Meyerhof pathways (EMP) and in gluconeogenesis;
+ catalyzes reversible isomerization of glucose-6-phosphate
+ to fructose-6-phosphate; member of PGI family"
+ /codon_start=1
+ /transl_table=11
+ /product="glucose-6-phosphate isomerase"
+ /protein_id="YP_001572432.1"
+ /db_xref="GI:161505320"
+ /db_xref="InterPro:IPR001672"
+ /translation="MKNINPTQTSAWQALQKHYDEMKDVTIAELFAKDSDRFAKFSAT
+ FDDLMLVDFSKNRITEETLAKLQDLAKETDLAGAIKSMFSGEKINRTEDRAVLHVALR
+ NRSNTPIIVDDKDVMPEVNAVLEKMKTFSEAIISGQWKGYTGKAITDVVNIGIGGSDL
+ GPFMVTEALRPYKNHLNMHFVSNVDGTHIAEVLKKVNPETTLFLVASKTFTTQETMTN
+ AHSARDWFLKTAGDEKHVAKHFAALSTNAKAVGEFGIDTANMFEFWDWVGGRYSLWSA
+ IGLSIILSVGFDNFVELLSGAHAMDKHFSTTPAEKNLPVLLALIGIWYNNFFGAETEA
+ ILPYDQYMHRFAAYFQQGNMESNGKYVDRNGNAVDYQTGPIIWGEPGTNGQHAFYQLI
+ HQGTKMVPCDFIAPAITHNPLSDHHQKLLSNFFAQTEALAFGKSREVVEQEYRDQGKD
+ PAQLEHVVPFKVFEGNRPTNSILLREITPYSLGALIALYEHKIFTQGAILNIFTFDQW
+ GVELGKQLANRILPELGDDKAISSHDSSTNGLINRYKAWRA"
+ misc_feature complement(3390645..3392288)
+ /gene="pgi"
+ /locus_tag="SARI_03461"
+ /note="glucose-6-phosphate isomerase; Reviewed; Region:
+ pgi; PRK00179"
+ /db_xref="CDD:234679"
+ misc_feature complement(3391443..3391931)
+ /gene="pgi"
+ /locus_tag="SARI_03461"
+ /note="Phosphoglucose isomerase (PGI) contains two SIS
+ (Sugar ISomerase) domains. This classification is based on
+ the alignment of the first SIS domain. PGI is a
+ multifunctional enzyme which as an intracellular dimer
+ catalyzes the reversible isomerization of...; Region:
+ SIS_PGI_1; cd05015"
+ /db_xref="CDD:240146"
+ misc_feature complement(order(3391485..3391487,3391656..3391658,
+ 3391665..3391673,3391818..3391823,3391827..3391829))
+ /gene="pgi"
+ /locus_tag="SARI_03461"
+ /note="active site"
+ /db_xref="CDD:240146"
+ misc_feature complement(order(3391629..3391631,3391638..3391640,
+ 3391650..3391652,3391737..3391748))
+ /gene="pgi"
+ /locus_tag="SARI_03461"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:240146"
+ misc_feature complement(3390732..3391301)
+ /gene="pgi"
+ /locus_tag="SARI_03461"
+ /note="Phosphoglucose isomerase (PGI) contains two SIS
+ (Sugar ISomerase) domains. This classification is based on
+ the alignment of the second SIS domain. PGI is a
+ multifunctional enzyme which as an intracellular dimer
+ catalyzes the reversible isomerization of...; Region:
+ SIS_PGI_2; cd05016"
+ /db_xref="CDD:240147"
+ misc_feature complement(order(3391005..3391007,3391014..3391016,
+ 3391038..3391040,3391044..3391046,3391110..3391112,
+ 3391119..3391124,3391131..3391136,3391143..3391151,
+ 3391155..3391157,3391215..3391220,3391227..3391229,
+ 3391239..3391241,3391275..3391277,3391299..3391301))
+ /gene="pgi"
+ /locus_tag="SARI_03461"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:240147"
+ misc_feature complement(order(3391227..3391229,3391239..3391241))
+ /gene="pgi"
+ /locus_tag="SARI_03461"
+ /note="active site"
+ /db_xref="CDD:240147"
+ gene 3392590..3393939
+ /locus_tag="SARI_03462"
+ CDS 3392590..3393939
+ /locus_tag="SARI_03462"
+ /inference="protein motif:Gene3D:IPR001048"
+ /inference="protein motif:HMMPfam:IPR001048"
+ /inference="protein motif:HMMPfam:IPR002912"
+ /inference="protein motif:HMMPIR:IPR012150"
+ /inference="protein motif:HMMTigr:IPR001341"
+ /inference="protein motif:HMMTigr:IPR005260"
+ /inference="protein motif:ScanRegExp:IPR001341"
+ /inference="protein motif:superfamily:IPR001048"
+ /inference="similar to AA sequence:INSD:"
+ /note="catalyzes the formation of 4-phospho-L-aspartate
+ from L-aspartate and ATP; functions in amino acid
+ biosynthesis; lysine sensitive"
+ /codon_start=1
+ /transl_table=11
+ /product="aspartate kinase III"
+ /protein_id="YP_001572433.1"
+ /db_xref="GI:161505321"
+ /db_xref="InterPro:IPR001048"
+ /db_xref="InterPro:IPR001341"
+ /db_xref="InterPro:IPR002912"
+ /db_xref="InterPro:IPR005260"
+ /db_xref="InterPro:IPR012150"
+ /translation="MTEIVVSKFGGTSVADFDAMNRSADIVLSDANVRLVVLSASAGI
+ TNLLVALAEGLEPSERFATLDAIRKIQFDIIERLRHPNVIREEIERLLENITILAEAA
+ SLATSAALTDELVSHGELMSTLLFVEILRERDVQAHWFDVRKVMRTSDRFGRAEPDVA
+ ALAELAAQQLLPRLNETLVITQGFIGGESKGRTTTLGRGGSDYTAALLAEALHAARVD
+ IWTDVPGIYTTDPRVVSVAQRIAEIDFEEAAEMATFGAKVLHPATLLPAVRSDIPVFV
+ GSSKDPKAGGTLVCNKTQNPPLFRALALRRNQTLLTLHSLNMLHSRGFLAEVFGILAR
+ HNISVDLITTSEVSIALTLDTTGSTSTGDTLLTQSLLMELSALCRVEVEEGLALIALI
+ GNNLSKACGVGKEVFGVLEPFNIRMICYGASSHNLCFLVPGEDAEQVVQKLHHNLFE"
+ misc_feature 3392599..3393936
+ /locus_tag="SARI_03462"
+ /note="aspartate kinase III; Validated; Region: PRK09084"
+ /db_xref="CDD:236376"
+ misc_feature 3392599..3393459
+ /locus_tag="SARI_03462"
+ /note="Amino Acid Kinases (AAK) superfamily, catalytic
+ domain; present in such enzymes like N-acetylglutamate
+ kinase (NAGK), carbamate kinase (CK), aspartokinase (AK),
+ glutamate-5-kinase (G5K) and UMP kinase (UMPK). The AAK
+ superfamily includes kinases that...; Region: AAK;
+ cl00452"
+ /db_xref="CDD:241871"
+ misc_feature order(3392611..3392613,3392617..3392625,3393253..3393258,
+ 3393265..3393270)
+ /locus_tag="SARI_03462"
+ /note="nucleotide binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:239033"
+ misc_feature order(3392611..3392613,3392617..3392622,3392704..3392712,
+ 3393187..3393195)
+ /locus_tag="SARI_03462"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:239033"
+ misc_feature 3393511..3393741
+ /locus_tag="SARI_03462"
+ /note="ACT domains are commonly involved in specifically
+ binding an amino acid or other small ligand leading to
+ regulation of the enzyme; Region: ACT; cl09141"
+ /db_xref="CDD:245020"
+ misc_feature 3393745..3393936
+ /locus_tag="SARI_03462"
+ /note="ACT domains located C-terminal to the catalytic
+ domain of the lysine-sensitive aspartokinase isoenzyme
+ AKIII; Region: ACT_AKiii-LysC-EC_2; cd04917"
+ /db_xref="CDD:153189"
+ misc_feature order(3393778..3393783,3393787..3393801,3393808..3393810,
+ 3393820..3393825,3393829..3393858)
+ /locus_tag="SARI_03462"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:153189"
+ gene 3394101..3394373
+ /locus_tag="SARI_03463"
+ CDS 3394101..3394373
+ /locus_tag="SARI_03463"
+ /inference="similar to AA sequence:REFSEQ:NP_458513.1"
+ /note="'COG: NOG14139 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572434.1"
+ /db_xref="GI:161505322"
+ /translation="MALPRITQKEMTEREQRELKTLLDRTRIAHGRPLTNSETNSVKK
+ EYIDKLMALREAEAKKARQLKKKQAHKPDTEASFSWSANTPTRGRR"
+ misc_feature 3394101..3394370
+ /locus_tag="SARI_03463"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10515"
+ /db_xref="CDD:170492"
+ gene complement(3394370..3395299)
+ /locus_tag="SARI_03464"
+ CDS complement(3394370..3395299)
+ /locus_tag="SARI_03464"
+ /inference="protein motif:HMMPfam:IPR002942"
+ /inference="protein motif:HMMPfam:IPR006145"
+ /inference="protein motif:HMMSmart:IPR002942"
+ /inference="protein motif:HMMTigr:IPR000748"
+ /inference="protein motif:ScanRegExp:IPR000748"
+ /inference="similar to AA sequence:REFSEQ:YP_219059.1"
+ /note="catalyzes the synthesis of pseudouridine from
+ U-2604 in the 23S ribosomal RNA"
+ /codon_start=1
+ /transl_table=11
+ /product="23S rRNA pseudouridine synthase F"
+ /protein_id="YP_001572435.1"
+ /db_xref="GI:161505323"
+ /db_xref="InterPro:IPR000748"
+ /db_xref="InterPro:IPR002942"
+ /db_xref="InterPro:IPR006145"
+ /translation="MVSHITDIYVEKISQRVNMLTDTSIRLNKYISESGICSRREADR
+ FIEQGNVFINGKRAAIGDQVVAGDVVKVNGRLIEPREADDLVLIALNKPVGIVSTTED
+ GERDNIVDFVNHSKRIFPVGRLDKDSQGLIFLTNHGDLVNKILRAGNDHEKEYLVTVD
+ KPVTDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRITLVQGLNRQIRRMCEHFGYDV
+ TKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIERSSSEAKTKTKATPKPKTAGI
+ KRPVVAIEKSNEKARPASSGKRFTSPGRKKKGR"
+ misc_feature complement(3394373..3395245)
+ /locus_tag="SARI_03464"
+ /note="23S rRNA pseudouridine synthase F; Provisional;
+ Region: PRK10475"
+ /db_xref="CDD:236698"
+ misc_feature complement(3395027..3395227)
+ /locus_tag="SARI_03464"
+ /note="S4/Hsp/ tRNA synthetase RNA-binding domain; The
+ domain surface is populated by conserved, charged residues
+ that define a likely RNA-binding site; Found in stress
+ proteins, ribosomal proteins and tRNA synthetases; This
+ may imply a hitherto unrecognized...; Region: S4; cd00165"
+ /db_xref="CDD:238095"
+ misc_feature complement(order(3395105..3395107,3395111..3395119,
+ 3395120..3395131,3395150..3395152,3395156..3395161,
+ 3395168..3395173,3395177..3395182,3395186..3395188,
+ 3395222..3395224))
+ /locus_tag="SARI_03464"
+ /note="RNA binding surface [nucleotide binding]; other
+ site"
+ /db_xref="CDD:238095"
+ misc_feature complement(3394553..3395044)
+ /locus_tag="SARI_03464"
+ /note="Pseudouridine synthase, Escherichia coli RluF like;
+ Region: PseudoU_synth_RluF; cd02554"
+ /db_xref="CDD:211328"
+ misc_feature complement(order(3394676..3394678,3394925..3394936))
+ /locus_tag="SARI_03464"
+ /note="probable active site [active]"
+ /db_xref="CDD:211328"
+ gene complement(3395293..3395832)
+ /locus_tag="SARI_03465"
+ CDS complement(3395293..3395832)
+ /locus_tag="SARI_03465"
+ /inference="similar to AA sequence:REFSEQ:NP_458511.1"
+ /note="'COG: COG3122 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572436.1"
+ /db_xref="GI:161505324"
+ /translation="MTKLTLQEQLLQAGLVTSKKMAKVQRTAKKSRVQARETREAVEE
+ NKKAQLERDKQFSEQQKQAVLAKEFKAQVKQLIEMNRINVSKSDIAFNFTDNNVIKKI
+ DVDKLIQTQLINGRLAIARLVIDNSGECEYAIIPASVADKIAQRDADSIVLNSTLSQE
+ EQDEDDPYADFKVPDDLMW"
+ misc_feature complement(3395296..3395832)
+ /locus_tag="SARI_03465"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG3122"
+ /db_xref="CDD:225664"
+ gene 3396054..3396743
+ /locus_tag="SARI_03466"
+ CDS 3396054..3396743
+ /locus_tag="SARI_03466"
+ /inference="protein motif:HMMPfam:IPR005320"
+ /inference="similar to AA sequence:INSD:AAL23014.1"
+ /note="alpha-aspartyl dipeptidase; catalyzes the
+ hydrolysis of dipeptides with an N-terminal aspartate
+ residue; belongs to peptidase S51 family"
+ /codon_start=1
+ /transl_table=11
+ /product="peptidase E"
+ /protein_id="YP_001572437.1"
+ /db_xref="GI:161505325"
+ /db_xref="InterPro:IPR005320"
+ /translation="MELLLLSNSTLPGKAWLEHALPLMANQLNGRRSAVFIPFAGVTQ
+ TWDEYTDKTAEVLTPLGINVTGIHRIAAPLEAIEKSEIIIVGGGNTFQLLKESRERGL
+ LAPIADRVKRGALYIGWSAGANLACPTIRTTNDMPIVDPNGFDALGLFPLQINPHFTN
+ ALPEGHKGETREQRIRELLVVAPELTVIGLPEGNWIQVSNGQAVLGGPNTTWVFKAGE
+ EAVALEAGHRF"
+ misc_feature 3396057..3396698
+ /locus_tag="SARI_03466"
+ /note="Type 1 glutamine amidotransferase (GATase1)-like
+ domain found in peptidase E; Region: GAT1_Peptidase_E;
+ cd03146"
+ /db_xref="CDD:153240"
+ misc_feature order(3396315..3396317,3396411..3396413,3396456..3396458,
+ 3396522..3396524,3396564..3396566,3396627..3396629)
+ /locus_tag="SARI_03466"
+ /note="active site pocket [active]"
+ /db_xref="CDD:153240"
+ misc_feature order(3396315..3396317,3396414..3396416)
+ /locus_tag="SARI_03466"
+ /note="oxyanion hole [active]"
+ /db_xref="CDD:153240"
+ misc_feature order(3396411..3396413,3396522..3396524,3396627..3396629)
+ /locus_tag="SARI_03466"
+ /note="catalytic triad [active]"
+ /db_xref="CDD:153240"
+ misc_feature 3396411..3396413
+ /locus_tag="SARI_03466"
+ /note="active site nucleophile [active]"
+ /db_xref="CDD:153240"
+ gene complement(3396817..3398373)
+ /locus_tag="SARI_03467"
+ CDS complement(3396817..3398373)
+ /locus_tag="SARI_03467"
+ /inference="protein motif:HMMPfam:IPR003841"
+ /inference="protein motif:HMMTigr:IPR003841"
+ /inference="protein motif:HMMTigr:IPR004633"
+ /inference="similar to AA sequence:INSD:AAV79773.1"
+ /note="'COG: COG1283 Na+/phosphate symporter;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572438.1"
+ /db_xref="GI:161505326"
+ /db_xref="InterPro:IPR003841"
+ /db_xref="InterPro:IPR004633"
+ /translation="MRVFGARLRTVLSRSVEKKPLAFCAGIGVTALVQSSNATTLLVT
+ SFVAQDLVALTPALVIVLGADVGTALMARILTFDLSWLSPLLTFIGVIFFLGRKQSRA
+ GQLGRVGIGLGLILLALELIVQAVTPITQANGVQVIFASLTGDIMLDALIGAMFAIIS
+ YSSLAAVLLTATLTAAGIISFPVALCLVIGANLGSGLLAMLNNSAANAAARRVALGSL
+ LFKLIGSLVILPFVHPLANLMDELPLAKSELVIYFHVFYNLVRCLAMVPFAEPMARFC
+ KRIIRDEPELDTHLKPKHLDVSALDTPTLALANAAREVLRIGDAMEQMMEGLKKVMHG
+ EPREEKTLRKLADDVNVLYTAIKLYLARMPKDELAAEESRRWAEIIEMALNLEQASDI
+ IERMGSEIADKSLAARRAFSEEGLKELDALYDQLLSNLQLAMSVFFSGDVTSARRLRR
+ SKHRFRILNRRYSHAHVDRLHQQNVQSIETSSLHLGLLGDMKRLNSLFCSVAYSVLEQ
+ PDQDEERGDY"
+ misc_feature complement(3396847..3398373)
+ /locus_tag="SARI_03467"
+ /note="Na+/phosphate symporter [Inorganic ion transport
+ and metabolism]; Region: NptA; COG1283"
+ /db_xref="CDD:224202"
+ misc_feature complement(3398074..3398370)
+ /locus_tag="SARI_03467"
+ /note="Na+/Pi-cotransporter; Region: Na_Pi_cotrans;
+ pfam02690"
+ /db_xref="CDD:202351"
+ gene complement(3398715..3402398)
+ /gene="metH"
+ /locus_tag="SARI_03468"
+ CDS complement(3398715..3402398)
+ /gene="metH"
+ /locus_tag="SARI_03468"
+ /inference="protein motif:Gene3D:IPR000489"
+ /inference="protein motif:Gene3D:IPR003726"
+ /inference="protein motif:Gene3D:IPR003759"
+ /inference="protein motif:Gene3D:IPR006158"
+ /inference="protein motif:HMMPfam:IPR000489"
+ /inference="protein motif:HMMPfam:IPR003726"
+ /inference="protein motif:HMMPfam:IPR003759"
+ /inference="protein motif:HMMPfam:IPR004223"
+ /inference="protein motif:HMMPfam:IPR006158"
+ /inference="protein motif:HMMTigr:IPR011822"
+ /inference="protein motif:ScanRegExp:IPR006162"
+ /inference="protein motif:superfamily:IPR003726"
+ /inference="protein motif:superfamily:IPR011005"
+ /note="one of two methionine synthases in Escherichia
+ coli; MetH catalyzes a methyl transfer reaction from
+ methyltetrahydrofolate to homocysteine to create
+ methionine; requires zinc for activity"
+ /codon_start=1
+ /transl_table=11
+ /product="B12-dependent methionine synthase"
+ /protein_id="YP_001572439.2"
+ /db_xref="GI:448236276"
+ /db_xref="InterPro:IPR000489"
+ /db_xref="InterPro:IPR003726"
+ /db_xref="InterPro:IPR003759"
+ /db_xref="InterPro:IPR004223"
+ /db_xref="InterPro:IPR006158"
+ /db_xref="InterPro:IPR006162"
+ /db_xref="InterPro:IPR011005"
+ /db_xref="InterPro:IPR011822"
+ /translation="MSSKVEQLRAQLNERILVLDGGMGTMIQSYRLHEEDFRGERFAD
+ WPCDLKGNNDLLVLSKPEVIAAIHNAYFEAGADIIETNTFNSTTIAMADYQMESLSAE
+ INYAAAKLARACADEWSARTPEKPRYVAGVLGPTNRTASISPDVNDPAFRNITFDQLV
+ AAYRESTKALVEGGADLILIETVFDTLNAKAAVFAVKAELEALGVDLPIMISGTITDA
+ SGRTLSGQTTEAFYNSLRHAGALTFGLNCALGPDELRQYVQELSRIAECYVTAHPNAG
+ LPNAFGEYDLDADTMAKHIREWAQAGFLNIVGGCCGTTPEHIAAMSRAVEDLPPRKLP
+ DIPVACRLSGLEPLNIGDDSLFVNVGERTNVTGSAKFKRLIKEEKYSEALDVARQQVE
+ SGAQIIDINMDEGMLDAEAAMVRFLSLIAGEPDIARVPIMIDSSKWEVIEKGLKCIQG
+ KGIVNSISMKEGVETFIHHAKLLRRYGAAVVVMAFDEQGQADTRERKIEICRRAYNIL
+ TKEVGFPPEDIIFDPNIFAVATGIDEHNNYAQDFIGACEDIKRELPHALISGGVSNVS
+ FSFRGNDPVREAIHAVFLYYAIRNGMDMGIVNAGQLAIYDDLPAELRDAVEDVILNRR
+ EDGTERLLELAEKYRGSKTDEAANAQQAEWRSWDVKKRLEYSLVKGITEFIEQDTEEA
+ RQQAARPIEVIEGPLMDGMNVVGDLFGEGKMFLPQVVKSARVMKQAVAYLEPFIEASK
+ EKGSSNGKMVIATVKGDVHDIGKNIVGVVLQCNNYDIVDLGVMVPAEKILKTAKEVNA
+ DLIGLSGLITPSLDEMVNVAKEMERQGFTIPLLIGGATTSKAHTAVKIEQNYSGPTVY
+ VQNASRTVGVVAALLSDTQRDDFVARTRKEYETVRIQHARKKPRTPPVTLEAARDNDL
+ AFDWERYTPPVAHRLGVQEVEASIETLRNYIDWTPFFMTWSLAGKYPRILEDEVVGEE
+ AKRLFKDANDMLDKLSAEKLLNPRGVVGLFPANRVGDDIEIYRDETRTHVLTVSHHLR
+ QQTEKVGFANYCLADFVAPKLSGKADYIGAFAVTAGLEEDALADVYEAQHDDYNKIMV
+ KAIADRLAEAFAEYLHERVRKVYWGYAPNESLSNEELIRENYQGIRPAPGYPACPEHT
+ EKGTIWQLLDVEKHTGMKLTESFAMWPGASVSGWYFSHPDSKYFAVAQIQRDQVTDYA
+ FRKGMSVEDVERWLAPNLGYDAD"
+ misc_feature complement(3398730..3402398)
+ /gene="metH"
+ /locus_tag="SARI_03468"
+ /note="B12-dependent methionine synthase; Provisional;
+ Region: metH; PRK09490"
+ /db_xref="CDD:236539"
+ misc_feature complement(3401421..3402398)
+ /gene="metH"
+ /locus_tag="SARI_03468"
+ /note="Methionine synthase I (cobalamin-dependent),
+ methyltransferase domain [Amino acid transport and
+ metabolism]; Region: MetH; COG0646"
+ /db_xref="CDD:223719"
+ misc_feature complement(3400563..3401333)
+ /gene="metH"
+ /locus_tag="SARI_03468"
+ /note="MeTr subgroup of pterin binding enzymes. This
+ family includes cobalamin-dependent methyltransferases
+ such as methyltetrahydrofolate, corrinoid iron-sulfur
+ protein methyltransferase (MeTr) and methionine synthase
+ (MetH). Cobalamin-dependent...; Region: MeTr; cd00740"
+ /db_xref="CDD:238381"
+ misc_feature complement(order(3400605..3400607,3400611..3400613,
+ 3400704..3400706,3400716..3400718,3400833..3400835,
+ 3400950..3400952,3401028..3401030,3401034..3401036,
+ 3401097..3401099,3401307..3401309))
+ /gene="metH"
+ /locus_tag="SARI_03468"
+ /note="substrate binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:238381"
+ misc_feature complement(3399786..3400424)
+ /gene="metH"
+ /locus_tag="SARI_03468"
+ /note="B12 binding domain of methionine synthase. This
+ domain binds methylcobalamin, which it uses as an
+ intermediate methyl carrier from methyltetrahydrofolate
+ (CH3H4folate) to homocysteine (Hcy); Region:
+ methionine_synthase_B12_BD; cd02069"
+ /db_xref="CDD:239020"
+ misc_feature complement(order(3399810..3399812,3399819..3399821,
+ 3399828..3399830,3399894..3399896,3399975..3399983,
+ 3399987..3399995,3400104..3400106,3400113..3400133,
+ 3400245..3400247,3400254..3400256,3400305..3400307,
+ 3400317..3400319))
+ /gene="metH"
+ /locus_tag="SARI_03468"
+ /note="B12 binding site [chemical binding]; other site"
+ /db_xref="CDD:239020"
+ misc_feature complement(3400122..3400124)
+ /gene="metH"
+ /locus_tag="SARI_03468"
+ /note="cobalt ligand [ion binding]; other site"
+ /db_xref="CDD:239020"
+ misc_feature complement(3398823..3399236)
+ /gene="metH"
+ /locus_tag="SARI_03468"
+ /note="Vitamin B12 dependent methionine synthase,
+ activation domain; Region: Met_synt_B12; pfam02965"
+ /db_xref="CDD:111813"
+ gene 3402670..3403527
+ /locus_tag="SARI_03469"
+ CDS 3402670..3403527
+ /locus_tag="SARI_03469"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR005471"
+ /inference="protein motif:HMMSmart:IPR005471"
+ /inference="similar to AA sequence:INSD:CAD09192.1"
+ /note="'regulates the glyoxylate bypass operon (aceBAK),
+ which encodes isocitrate lyase, malate synthase and
+ isocitrate dehydrogenase kinase/phosphorylase'"
+ /codon_start=1
+ /transl_table=11
+ /product="transcriptional repressor IclR"
+ /protein_id="YP_001572441.1"
+ /db_xref="GI:161505328"
+ /db_xref="InterPro:IPR005471"
+ /db_xref="InterPro:IPR011991"
+ /translation="MISTIQKKESAMVAPVSAKRGRKPAATTAPATGQVQSLTRGLKL
+ LEWIAESNGSVALTELAQQAGLPNSTTHRLLTTMQQQGFVRQVGELGHWAVGAHAFIV
+ GSSFLQSRNLLAIVHPILRKLMEDSGETVNLAVLDQSDHQAIIIDQVQCTQLMRMSAP
+ IGGKLPMHASGAGKAFLSQLSEEQVTGLLHRKGLHAYTHATLVSPLHLKDDLAQTRKR
+ GYSFDDEEHALGLRCVASCIYDEHREPFAALSISGPCSRITDDRVTELGAMVIKAAKE
+ VTLAYGGFR"
+ misc_feature 3402703..3403524
+ /locus_tag="SARI_03469"
+ /note="transcriptional repressor IclR; Provisional;
+ Region: PRK11569"
+ /db_xref="CDD:183206"
+ misc_feature 3402772..3403044
+ /locus_tag="SARI_03469"
+ /note="helix_turn_helix isocitrate lyase regulation;
+ Region: HTH_ICLR; smart00346"
+ /db_xref="CDD:214629"
+ misc_feature 3403132..3403509
+ /locus_tag="SARI_03469"
+ /note="Bacterial transcriptional regulator; Region: IclR;
+ pfam01614"
+ /db_xref="CDD:201890"
+ gene complement(3403572..3405446)
+ /gene="aceK"
+ /locus_tag="SARI_03471"
+ CDS complement(3403572..3405446)
+ /gene="aceK"
+ /locus_tag="SARI_03471"
+ /inference="protein motif:HMMPfam:IPR010452"
+ /inference="protein motif:HMMPIR:IPR010452"
+ /note="catalyzes the phosphorylation/dephosphorylation of
+ the enzyme isocitrate dehydrogenase on a specific serine
+ which regulates activity; unphosphorylated IDH is fully
+ active when cells are grown on glucose while the enzyme
+ becomes phosphorylated and inactive in the presence of
+ acetate or ethanol"
+ /codon_start=1
+ /transl_table=11
+ /product="bifunctional isocitrate dehydrogenase
+ kinase/phosphatase protein"
+ /protein_id="YP_001572442.1"
+ /db_xref="GI:161505330"
+ /db_xref="InterPro:IPR010452"
+ /translation="MPDGATFTGPTKGCRPDKRMRYPASDGDTKMSRGLELLIAQTIL
+ QGFDAQYGRFLEVTSGAQQRFEQADWHAVQQAMKSRIHLYDHHVGLVVEQLRCITDGK
+ NTDANFLLRVKEHYTRLLPDYPRFEIAESFFNSVYCRLFDHRSLTPERLFIFSSQPER
+ RFRTIPRPLAKDFFPDHGWELLLMRILSDLPLRLPWQNKSRDIRYIIAHLTEILGEDA
+ LPRCHLQVANELFYRNKAAWLVGKLATPDGTLPFLLPIHRTDEGELFVDTCLTTTAEA
+ SIVFGFARSYFMVYAPLPAALVEWLREILPGKTTAELYMAIGCQKHAKTESYREYLCY
+ LAESDEKFIEAPGIRGMVMLVFTLPGFDRVFKIIKDKFAPQKEMSAAHVRACYQLVKE
+ HDRVGRMADTQEFENFVLDKRQIDPALMALLQQEAPEKITDLGEHIVIRHLYIERRMV
+ PLNIWLEQVEGQQLRDAIEEYGNAIRQLAAANIFPGDMLFKNFGVTRHGRVVFYDYDE
+ ICYMTEVNFRDIPPARYPEDELASEPWYSVSPGDVFPEEFRHWLCADPRIGPLFEEMH
+ ADLFRADYWRALQTRIKEGHVEDVYAYRRRQRFSVRYDIDRRLDKAPAPPSGNVCRTA
+ "
+ misc_feature complement(3403638..3405356)
+ /gene="aceK"
+ /locus_tag="SARI_03471"
+ /note="Isocitrate dehydrogenase kinase/phosphatase [Signal
+ transduction mechanisms]; Region: COG4579"
+ /db_xref="CDD:226945"
+ misc_feature complement(3403638..3405356)
+ /gene="aceK"
+ /locus_tag="SARI_03471"
+ /note="bifunctional isocitrate dehydrogenase
+ kinase/phosphatase protein; Validated; Region: aceK;
+ PRK02946"
+ /db_xref="CDD:235089"
+ gene complement(3405450..3406769)
+ /locus_tag="SARI_03472"
+ CDS complement(3405450..3406769)
+ /locus_tag="SARI_03472"
+ /inference="protein motif:BlastProDom:IPR000918"
+ /inference="protein motif:HMMPanther:IPR006254"
+ /inference="protein motif:HMMPfam:IPR000918"
+ /inference="protein motif:HMMTigr:IPR006254"
+ /inference="protein motif:ScanRegExp:IPR000918"
+ /inference="similar to AA sequence:REFSEQ:YP_153081.1"
+ /note="'KEGG: spt:SPA4022 5.7e-232 aceA; isocitrate lyase
+ K01637;
+ COG: COG2224 Isocitrate lyase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="isocitrate lyase"
+ /protein_id="YP_001572443.1"
+ /db_xref="GI:161505331"
+ /db_xref="InterPro:IPR000918"
+ /db_xref="InterPro:IPR006254"
+ /translation="MEHLYMKTRTQQIEELQKEWTQPRWEGITRPYSAEDVVKLRGSV
+ NPECTLAQLGAAKMWRLLHGEAKKGYINSLGALTGGQALQQAKAGIEAVYLSGWQVAA
+ DANLASSMYPDQSLYPANSVPAVVDRINNTFRRADQIQWASGIEPNDPRYVDYFLPIV
+ ADAEAGFGGVLNAFELMKSMIEAGAAAVHFEDQLASVKKCGHMGGKVLVPTQEAIQKL
+ VAARLAADVMGVPTLVIARTDADAADLITSDCDQYDSEFITGERTSEGFFRTHAGIEQ
+ AISRGLAYAPYADLVWCETSTPDLELAKRFADAIHAKYPGKLLAYNCSPSFNWQKNLD
+ DKTIASFQQQLSDMGYKYQFITLAGIHSMWFNMFDLAHAYAQGEGMKHYVEKVQQPEF
+ AAAKDGYTFVSHQQEVGTGYFDKVTTIIQGGASSVTALTGSTEESQF"
+ misc_feature complement(3405453..3406754)
+ /locus_tag="SARI_03472"
+ /note="isocitrate lyase; Provisional; Region: PRK15063"
+ /db_xref="CDD:237893"
+ misc_feature complement(3405651..3406598)
+ /locus_tag="SARI_03472"
+ /note="Members of the ICL/PEPM enzyme family catalyze
+ either P-C or C-C bond formation/cleavage. Known members
+ are phosphoenolpyruvate mutase (PEPM), phosphonopyruvate
+ hydrolase (PPH), carboxyPEP mutase (CPEP mutase),
+ oxaloacetate hydrolase (OAH), isocitrate...; Region:
+ ICL_PEPM; cd00377"
+ /db_xref="CDD:119340"
+ misc_feature complement(order(3405654..3405662,3405666..3405674,
+ 3405678..3405686,3406101..3406103,3406110..3406115,
+ 3406122..3406124,3406131..3406136,3406224..3406226,
+ 3406233..3406235,3406245..3406250,3406266..3406268,
+ 3406374..3406379,3406386..3406391,3406395..3406400,
+ 3406407..3406412,3406416..3406427,3406434..3406439,
+ 3406446..3406448,3406464..3406466,3406476..3406478,
+ 3406497..3406505,3406509..3406511,3406518..3406523,
+ 3406527..3406541,3406545..3406556,3406560..3406562,
+ 3406590..3406592))
+ /locus_tag="SARI_03472"
+ /note="tetramer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:119340"
+ misc_feature complement(order(3405702..3405704,3405798..3405800,
+ 3405804..3405806,3405888..3405890,3406059..3406061,
+ 3406197..3406199,3406278..3406280,3406284..3406286,
+ 3406431..3406433,3406476..3406484,3406488..3406490))
+ /locus_tag="SARI_03472"
+ /note="active site"
+ /db_xref="CDD:119340"
+ misc_feature complement(order(3406197..3406199,3406278..3406280,
+ 3406284..3406286,3406431..3406433))
+ /locus_tag="SARI_03472"
+ /note="Mg2+/Mn2+ binding site [ion binding]; other site"
+ /db_xref="CDD:119340"
+ gene complement(3406786..3408387)
+ /locus_tag="SARI_03473"
+ CDS complement(3406786..3408387)
+ /locus_tag="SARI_03473"
+ /inference="protein motif:HMMPfam:IPR001465"
+ /inference="protein motif:HMMTigr:IPR006252"
+ /inference="protein motif:ScanRegExp:IPR001465"
+ /inference="protein motif:superfamily:IPR011076"
+ /inference="similar to AA sequence:REFSEQ:NP_463048.1"
+ /note="Catalyzes the aldol condensation of glyoxylate with
+ acetyl-CoA to form malate as part of the second step of
+ the glyoxylate bypass and an alternative to the
+ tricarboxylic acid cycle"
+ /codon_start=1
+ /transl_table=11
+ /product="malate synthase"
+ /protein_id="YP_001572444.1"
+ /db_xref="GI:161505332"
+ /db_xref="InterPro:IPR001465"
+ /db_xref="InterPro:IPR006252"
+ /db_xref="InterPro:IPR011076"
+ /translation="MNPQATTTDELTFTRPPGELEKQVLTAEAVEFLTELVTRFTPKR
+ NKLLAARIQQQQDIDNGKLPDFISETTSIREGNWQIRGIPEDLQDRRVEITGPVERKM
+ VINALNANVKVFMADFEDSLAPDWDKVIDGQINLRDAVNGTISYTNEAGKIYQLKPDP
+ AVLICRVRGLHLPEKHVTWRGEAIPGSLFDFALYFFHNYKALLAKGSGPYFYLPKTQA
+ WQEAAWWSEVFSYAEDRFNLPRGTIKATLLIETLPAVFQMDEILYALRDHIVGLNCGR
+ WDYIFSYIKTLKNHPERVLPDRQVVTMDKPFLSAYSRLLIKTCHKRGAFAMGGMAAFI
+ PSKDAERNAQVLNKVKADKALEANNGHDGTWIAHPGLADTAMAVFNEVLGEHKNQLFI
+ TRDEDAPITAKQLLEPCEGERTEAGMRANIRVAVQYIEAWISGNGCVPIYGLMEDAAT
+ AEISRTSIWQWIHHEKTLSNGKPVTKTLFREMLAEEMRVIQDELGEHRYSKGRFDDAA
+ RLMEQITTSDDLIDFLTLPGYRLLA"
+ misc_feature complement(3406789..3408318)
+ /locus_tag="SARI_03473"
+ /note="Malate synthase A (MSA), present in some bacteria,
+ plants and fungi. Prokaryotic MSAs tend to be monomeric,
+ whereas eukaryotic enzymes are homomultimers. In general,
+ malate synthase catalyzes the Claisen condensation of
+ glyoxylate and acetyl-CoA to...; Region: malate_synt_A;
+ cd00727"
+ /db_xref="CDD:238369"
+ misc_feature complement(3406792..3408318)
+ /locus_tag="SARI_03473"
+ /note="malate synthase A; Region: malate_syn_A; TIGR01344"
+ /db_xref="CDD:188132"
+ misc_feature complement(order(3407047..3407049,3407554..3407556,
+ 3407560..3407562,3407638..3407640,3407890..3407892))
+ /locus_tag="SARI_03473"
+ /note="active site"
+ /db_xref="CDD:238369"
+ gene complement(3408656..3409585)
+ /locus_tag="SARI_03474"
+ CDS complement(3408656..3409585)
+ /locus_tag="SARI_03474"
+ /inference="protein motif:BlastProDom:IPR005697"
+ /inference="protein motif:HMMPfam:IPR005697"
+ /inference="protein motif:HMMPIR:IPR005697"
+ /inference="protein motif:HMMTigr:IPR005697"
+ /inference="similar to AA sequence:SwissProt:P37413"
+ /note="catalyzes the formation of O-succinyl-L-homoserine
+ from succinyl-CoA and L-homoserine in methionine
+ biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="homoserine O-succinyltransferase"
+ /protein_id="YP_001572445.1"
+ /db_xref="GI:161505333"
+ /db_xref="InterPro:IPR005697"
+ /translation="MPIRVLDELPAVNFLREENVFVMTTSRATGQEIRPLKVIILNLM
+ PKKIETENQFLRLLSNSPLQVDIQLLRIDARESRNTPAEHLNNFYCNFEDICDQNFDG
+ LIVTGAPLGLVEFNDVAYWPQIRQVLEWAKDHVTSTLFVCWAVQAALNILYGIPKQTR
+ TDKLSGVYEHHILHPYALLTRGFDDTFLAPHSRYADFPAALIRDYTDLEILAETEGGD
+ AYLFASKDKRIAFVTGHPEYDAHTLAGEYFRDVEAGLNPDIPYNYFPKNDPQNKPRAT
+ WRSHGNLLFTNWLNYYVYQITPYDLRHMNPTLD"
+ misc_feature complement(3408680..3409585)
+ /locus_tag="SARI_03474"
+ /note="homoserine O-succinyltransferase; Provisional;
+ Region: PRK05368"
+ /db_xref="CDD:235433"
+ misc_feature complement(3408947..3409474)
+ /locus_tag="SARI_03474"
+ /note="Type 1 glutamine amidotransferase (GATase1)-like
+ domain found in homoserine trans-succinylase (HTS);
+ Region: GATase1_HTS; cd03131"
+ /db_xref="CDD:153225"
+ misc_feature complement(3409445..3409447)
+ /locus_tag="SARI_03474"
+ /note="proposed active site lysine [active]"
+ /db_xref="CDD:153225"
+ misc_feature complement(3409160..3409162)
+ /locus_tag="SARI_03474"
+ /note="conserved cys residue [active]"
+ /db_xref="CDD:153225"
+ gene 3409734..3410171
+ /locus_tag="SARI_03475"
+ CDS 3409734..3410171
+ /locus_tag="SARI_03475"
+ /inference="protein motif:HMMPfam:IPR000182"
+ /inference="similar to AA sequence:INSD:AAL23005.1"
+ /note="'KEGG: stm:STM4181 6.4e-66 yjaB; putative
+ acetyltransferase K03827;
+ COG: COG0454 Histone acetyltransferase HPA2 and related
+ acetyltransferases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572446.1"
+ /db_xref="GI:161505334"
+ /db_xref="InterPro:IPR000182"
+ /translation="MMINIRRSTHEEGGKLIAIWRRSVDATHHFLSDAYRAELEELVS
+ DFLPEAPLWVAVTDQDEPVGFMLLTGEHMDALFVDPDFRGCGIGKLLIEHALTLAPHL
+ TTSVNEQNIQAVGFYKKTGFKVTGRSEVDDLGKPYPLLKLAYG"
+ misc_feature 3409779..3410099
+ /locus_tag="SARI_03475"
+ /note="Acetyltransferase (GNAT) domain; Region:
+ Acetyltransf_10; pfam13673"
+ /db_xref="CDD:222309"
+ misc_feature 3409887..3410030
+ /locus_tag="SARI_03475"
+ /note="N-Acyltransferase superfamily: Various enzymes that
+ characteristically catalyze the transfer of an acyl group
+ to a substrate; Region: NAT_SF; cd04301"
+ /db_xref="CDD:173926"
+ misc_feature <3409956..3410120
+ /locus_tag="SARI_03475"
+ /note="N-Acyltransferase superfamily: Various enzymes that
+ characteristically catalyze the transfer of an acyl group
+ to a substrate; Region: NAT_SF; cl17182"
+ /db_xref="CDD:247736"
+ misc_feature order(3409959..3409967,3409995..3410000)
+ /locus_tag="SARI_03475"
+ /note="Coenzyme A binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:173926"
+ gene complement(3410335..3410450)
+ /locus_tag="SARI_03476"
+ rRNA complement(3410335..3410450)
+ /locus_tag="SARI_03476"
+ /product="5S ribosomal RNA"
+ /inference="nucleotide motif:Rfam:RF00001"
+ /note="Rfam score 84.4"
+ gene complement(3410639..3413545)
+ /locus_tag="SARI_03477"
+ rRNA complement(3410639..3413545)
+ /locus_tag="SARI_03477"
+ /product="23S ribosomal RNA"
+ /note="Gene model created based on homology with SPA4016"
+ gene complement(3413732..3413804)
+ /locus_tag="SARI_03478"
+ tRNA complement(3413732..3413804)
+ /locus_tag="SARI_03478"
+ /product="tRNA-Glu"
+ gene complement(3413886..3415432)
+ /locus_tag="SARI_r001"
+ rRNA complement(3413886..3415432)
+ /locus_tag="SARI_r001"
+ /product="16S ribosomal RNA"
+ /inference="nucleotide motif:Rfam:RF00177"
+ /note="Rfam score 351.93;
+ 5 domain"
+ gene 3415769..3415966
+ /locus_tag="SARI_03480"
+ CDS 3415769..3415966
+ /locus_tag="SARI_03480"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572447.1"
+ /db_xref="GI:161505335"
+ /translation="MTVCCIPQQNPDLYPFTHRLIHKTLVHFFDPLSANDLSGVKMGP
+ EFKKKNLRALRKRFRYNVAEK"
+ gene 3416054..3417643
+ /gene="purH"
+ /locus_tag="SARI_03481"
+ CDS 3416054..3417643
+ /gene="purH"
+ /locus_tag="SARI_03481"
+ /inference="protein motif:BlastProDom:IPR002695"
+ /inference="protein motif:HMMPanther:IPR002695"
+ /inference="protein motif:HMMPfam:IPR011607"
+ /inference="protein motif:HMMPfam:IPR013982"
+ /inference="protein motif:HMMSmart:IPR013982"
+ /inference="protein motif:HMMTigr:IPR002695"
+ /inference="similar to AA sequence:SwissProt:P26978"
+ /note="involved in de novo purine biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="bifunctional
+ phosphoribosylaminoimidazolecarboxamide
+ formyltransferase/IMP cyclohydrolase"
+ /protein_id="YP_001572448.1"
+ /db_xref="GI:161505336"
+ /db_xref="InterPro:IPR002695"
+ /db_xref="InterPro:IPR011607"
+ /db_xref="InterPro:IPR013982"
+ /translation="MQQRRSVRRALLSVSDKAGIVEFAQALSARGVELLSTGGTARLL
+ AEKGLPVTEVSDYTGFPEMMDGRVKTLHPKVHGGILGRRGQDDGIMEQHGIAPIDMVV
+ VNLYPFAETVAHVGCSLEDAVENIDIGGPTMVRSAAKNHKDVAIVVKSSDYDAIINEM
+ DANEGSLLLETRFDLAIKAFEHTAAYDSMIANYFGSMVPAYHGESKEAAGRFPRTLNL
+ NFIKKQDMRYGENSHQQAAFYIEENVKEASVATAQQVQGKALSYNNIADTDAALECVK
+ AFSEPACVIVKHANPCGVAVSASILDAYDRAYKTDPTSAFGGIIAFNRELDAETAQAI
+ ISRQFVEVIIAPSATEEALKITAAKQNVRVLTCGQWAQRVPGLDFKRVNGGLLVQDRD
+ LGMVSERELRVVSKRQPTEQELRDALFCWKVAKFVKSNAIVYAKENMTIGIGAGQMSR
+ VYSAKIAGIKAADEGLEVQGSAMASDAFFPFRDGIDAAAAVGVSCVIQPGGSIRDDEV
+ IAAADEHGIAMIFTDMRHFRH"
+ misc_feature 3416099..3417640
+ /gene="purH"
+ /locus_tag="SARI_03481"
+ /note="bifunctional
+ phosphoribosylaminoimidazolecarboxamide
+ formyltransferase/IMP cyclohydrolase; Provisional; Region:
+ purH; PRK00881"
+ /db_xref="CDD:234854"
+ misc_feature 3416099..3416635
+ /gene="purH"
+ /locus_tag="SARI_03481"
+ /note="Inosine monophosphate cyclohydrolase domain. This
+ is the N-terminal domain in the purine biosynthesis
+ pathway protein ATIC (purH). The bifunctional ATIC protein
+ contains a C-terminal ATIC formylase domain that
+ formylates...; Region: IMPCH; cd01421"
+ /db_xref="CDD:238709"
+ misc_feature order(3416102..3416104,3416162..3416164,3416171..3416173,
+ 3416258..3416263,3416363..3416365,3416432..3416434)
+ /gene="purH"
+ /locus_tag="SARI_03481"
+ /note="purine monophosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:238709"
+ misc_feature order(3416231..3416233,3416240..3416245,3416252..3416257,
+ 3416264..3416272,3416279..3416284,3416291..3416293,
+ 3416429..3416437,3416444..3416446,3416456..3416461,
+ 3416468..3416470,3416570..3416572,3416579..3416587,
+ 3416609..3416617,3416621..3416626,3416633..3416635)
+ /gene="purH"
+ /locus_tag="SARI_03481"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238709"
+ misc_feature order(3416258..3416260,3416432..3416434)
+ /gene="purH"
+ /locus_tag="SARI_03481"
+ /note="putative catalytic residues [active]"
+ /db_xref="CDD:238709"
+ misc_feature 3416462..3417436
+ /gene="purH"
+ /locus_tag="SARI_03481"
+ /note="AICARFT/IMPCHase bienzyme; Region: AICARFT_IMPCHas;
+ smart00798"
+ /db_xref="CDD:214822"
+ unsure 3416169..3416282
+ /gene="purH"
+ /locus_tag="SARI_03481"
+ /note="Sequence derived from one plasmid subclone"
+ gene 3417643..3418944
+ /locus_tag="SARI_03482"
+ CDS 3417643..3418944
+ /locus_tag="SARI_03482"
+ /inference="protein motif:Gene3D:IPR000115"
+ /inference="protein motif:Gene3D:IPR013815"
+ /inference="protein motif:Gene3D:IPR013816"
+ /inference="protein motif:Gene3D:IPR013817"
+ /inference="protein motif:HMMPfam:IPR000115"
+ /inference="protein motif:HMMTigr:IPR000115"
+ /inference="protein motif:ScanRegExp:IPR000115"
+ /inference="protein motif:superfamily:IPR011054"
+ /inference="similar to AA sequence:INSD:CAD09469.1"
+ /note="catalyzes the formation of
+ N(1)-(5-phospho-D-ribosyl)glycinamide from
+ 5-phospho-D-ribosylamine and glycine in purine
+ biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphoribosylamine--glycine ligase"
+ /protein_id="YP_001572449.1"
+ /db_xref="GI:161505337"
+ /db_xref="InterPro:IPR000115"
+ /db_xref="InterPro:IPR011054"
+ /db_xref="InterPro:IPR013815"
+ /db_xref="InterPro:IPR013816"
+ /db_xref="InterPro:IPR013817"
+ /translation="MERNMKVLVIGNGGREHALAWKAAQSPKVKTVFVAPGNAGTALE
+ PTLQNVAISVTDIPALLSFAQNEKIDLTIVGPEAPLVIGVVDAFRAAGLKIFGPTEGA
+ AQLEGSKAFTKDFLARHNIPTAEYQNFTEVEPALAYLREKGAPIVIKADGLAAGKGVI
+ VAMTLEEAEAAVHDMLAGNAFGDAGHRIVIEEFLDGEEASFIVMVDGEHVLPMATSQD
+ HKRVGNGDTGPNTGGMGAYSPAPVVTDEVHQRTMERIIWPTVKGMAAEGNTYTGFLYA
+ GLMIDKQGNPKVIEFNCRFGDPETQPIMLRLKSDLVDLCLAACDGRLDEKTSEWDDRA
+ SLGVVMAAGGYPGDYRTGDEIHGLPLEEVADGKVFHAGTTLSNDDRVLTSGGRVLCAT
+ ALGDTVAEAQQRAYALMTDIHWDDCFCRNDIGWRAIERKQS"
+ misc_feature 3417655..3418932
+ /locus_tag="SARI_03482"
+ /note="phosphoribosylamine--glycine ligase; Provisional;
+ Region: PRK00885"
+ /db_xref="CDD:234856"
+ misc_feature 3417655..3417960
+ /locus_tag="SARI_03482"
+ /note="Phosphoribosylglycinamide synthetase, N domain;
+ Region: GARS_N; pfam02844"
+ /db_xref="CDD:217251"
+ misc_feature 3417961..3418542
+ /locus_tag="SARI_03482"
+ /note="Phosphoribosylglycinamide synthetase, ATP-grasp (A)
+ domain; Region: GARS_A; pfam01071"
+ /db_xref="CDD:216282"
+ misc_feature 3418642..3418926
+ /locus_tag="SARI_03482"
+ /note="Phosphoribosylglycinamide synthetase, C domain;
+ Region: GARS_C; pfam02843"
+ /db_xref="CDD:217250"
+ unsure 3418459..3418477
+ /locus_tag="SARI_03482"
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(3418941..3420266)
+ /locus_tag="SARI_03483"
+ CDS complement(3418941..3420266)
+ /locus_tag="SARI_03483"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR001789"
+ /inference="protein motif:HMMPfam:IPR002078"
+ /inference="protein motif:HMMPfam:IPR002197"
+ /inference="protein motif:HMMSmart:IPR001789"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR002078"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="protein motif:superfamily:IPR011006"
+ /inference="similar to AA sequence:INSD:AAF33506.1"
+ /note="DNA-binding response regulator in two-component
+ regulatory system with ZraS; response regulator/sigma54
+ interaction protein"
+ /codon_start=1
+ /transl_table=11
+ /product="transcriptional regulatory protein ZraR"
+ /protein_id="YP_001572450.1"
+ /db_xref="GI:161505338"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR002078"
+ /db_xref="InterPro:IPR002197"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR011006"
+ /db_xref="InterPro:IPR012287"
+ /translation="MIRGKIDILVVDDDVSHCTILQALLRGWGYNVALAYSGHDALAQ
+ VREKVFDLVLCDVRMAEMDGIATLKEIKLLNPAIPILIMTAFSSVETAVEALKAGALD
+ YLIKPLDFDHLQETLEKALAHTRETGAELPSASATQFGMIGSSPAMQHLLNEIAMVAP
+ SDATVLIHGDSGTGKELVARALHACSARSDKPLVTLNCAALNESLLESELFGHEKGAF
+ TGADKRREGRFVEADGGTLFLDEIGDISPLMQVRLLRAIQEREVQRVGSNQTISVDVR
+ LIAATHRDLAEEVSAGRFRQDLYYRLNVVAIEMPSLRQRREDIPLLADHFLRRFAERN
+ RKVVKGFTPQAMDLLIHYDWPGNIRELENAIERAVVLLTGEYISERELPLTIAATPIK
+ TENSAGIQPLVDVEKEVILAALEKTGGNKTEAARQLGITRKTLLAKLSR"
+ misc_feature complement(3418944..3420266)
+ /locus_tag="SARI_03483"
+ /note="transcriptional regulatory protein ZraR;
+ Provisional; Region: PRK10365"
+ /db_xref="CDD:182412"
+ misc_feature complement(3419904..3420242)
+ /locus_tag="SARI_03483"
+ /note="Signal receiver domain; originally thought to be
+ unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
+ recently identified in eukaroytes ETR1 Arabidopsis
+ thaliana; this domain receives the signal from the sensor
+ partner in a two-component systems; Region: REC; cd00156"
+ /db_xref="CDD:238088"
+ misc_feature complement(order(3419946..3419951,3419958..3419960,
+ 3420015..3420017,3420075..3420077,3420099..3420101,
+ 3420228..3420233))
+ /locus_tag="SARI_03483"
+ /note="active site"
+ /db_xref="CDD:238088"
+ misc_feature complement(3420099..3420101)
+ /locus_tag="SARI_03483"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238088"
+ misc_feature complement(order(3420075..3420083,3420087..3420092))
+ /locus_tag="SARI_03483"
+ /note="intermolecular recognition site; other site"
+ /db_xref="CDD:238088"
+ misc_feature complement(3419943..3419951)
+ /locus_tag="SARI_03483"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238088"
+ misc_feature complement(3419352..3419831)
+ /locus_tag="SARI_03483"
+ /note="The AAA+ (ATPases Associated with a wide variety of
+ cellular Activities) superfamily represents an ancient
+ group of ATPases belonging to the ASCE (for additional
+ strand, catalytic E) division of the P-loop NTPase fold.
+ The ASCE division also includes ABC; Region: AAA; cd00009"
+ /db_xref="CDD:99707"
+ misc_feature complement(3419739..3419762)
+ /locus_tag="SARI_03483"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(order(3419421..3419423,3419547..3419549,
+ 3419736..3419759))
+ /locus_tag="SARI_03483"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(3419544..3419561)
+ /locus_tag="SARI_03483"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(3419364..3419366)
+ /locus_tag="SARI_03483"
+ /note="arginine finger; other site"
+ /db_xref="CDD:99707"
+ misc_feature complement(3418944..3419063)
+ /locus_tag="SARI_03483"
+ /note="Bacterial regulatory protein, Fis family; Region:
+ HTH_8; pfam02954"
+ /db_xref="CDD:202485"
+ gene complement(3420272..3421735)
+ /locus_tag="SARI_03484"
+ CDS complement(3420272..3421735)
+ /locus_tag="SARI_03484"
+ /inference="protein motif:Gene3D:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003661"
+ /inference="protein motif:HMMSmart:IPR003594"
+ /inference="protein motif:HMMSmart:IPR003661"
+ /inference="protein motif:superfamily:IPR003594"
+ /inference="protein motif:superfamily:IPR009082"
+ /inference="similar to AA sequence:REFSEQ:YP_219041.1"
+ /note="'KEGG: sec:SC4054 1.4e-253 hydH, hydG; sensory
+ kinase in two component regulatory system with HydG
+ K07709;
+ COG: COG0642 Signal transduction histidine kinase;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="sensor protein ZraS"
+ /protein_id="YP_001572451.1"
+ /db_xref="GI:161505339"
+ /db_xref="InterPro:IPR003594"
+ /db_xref="InterPro:IPR003661"
+ /db_xref="InterPro:IPR009082"
+ /translation="MRSEEWHDLCLSKENKNEPGKPVSFIRLHKDAAATWLSRLLPAA
+ IFILVGLFSIMVIRDYGRESAAARQTLLEKGNVLIRALESGTRVGMGMRMHHAQQQTL
+ LEEMAGQPGVLWFAVTDAQGVIITHSNPGMVGKSLYSTSEMHQLNPGPQERWRRVDVA
+ ANGETVPALEIYRQFQPLFGMRGHGMRGHGMARSANDDEPAKQTIFIAFDASELAATQ
+ AREWRNTLIVLSALAAVLLATLLAFFWHQRYQRSHRELLDAMKRKEKLVAMGHLAAGV
+ AHEIRNPLSSIKGLAKYFAERTPAGGESHELAQVMAKEADRLNRVVSELLELVKPAHL
+ TLQAVNLNDIITHSLNLVSQDAQSREIQLRFTANETLKRIQADPDRLTQVLLNLYLNA
+ IHAIGRQGTITVEAKESGTDRVIITVTDSGKGIAPDQLEAIFTPYFTTKADGTGLGLA
+ VVQNIIEQHGGAIKVKSIEGKGAVFTIWLPVIARQQD"
+ misc_feature complement(3420275..3421660)
+ /locus_tag="SARI_03484"
+ /note="sensor protein ZraS; Provisional; Region: PRK10364"
+ /db_xref="CDD:236674"
+ misc_feature complement(3420746..3420940)
+ /locus_tag="SARI_03484"
+ /note="Histidine Kinase A (dimerization/phosphoacceptor)
+ domain; Histidine Kinase A dimers are formed through
+ parallel association of 2 domains creating 4-helix
+ bundles; usually these domains contain a conserved His
+ residue and are activated via...; Region: HisKA; cd00082"
+ /db_xref="CDD:119399"
+ misc_feature complement(order(3420761..3420763,3420773..3420775,
+ 3420782..3420784,3420794..3420796,3420803..3420805,
+ 3420815..3420817,3420866..3420868,3420875..3420877,
+ 3420887..3420889,3420896..3420898,3420908..3420910,
+ 3420920..3420922))
+ /locus_tag="SARI_03484"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119399"
+ misc_feature complement(3420902..3420904)
+ /locus_tag="SARI_03484"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:119399"
+ misc_feature complement(3420299..3420595)
+ /locus_tag="SARI_03484"
+ /note="Histidine kinase-like ATPases; This family includes
+ several ATP-binding proteins for example: histidine
+ kinase, DNA gyrase B, topoisomerases, heat shock protein
+ HSP90, phytochrome-like ATPases and DNA mismatch repair
+ proteins; Region: HATPase_c; cd00075"
+ /db_xref="CDD:238030"
+ misc_feature complement(order(3420311..3420313,3420317..3420322,
+ 3420335..3420337,3420341..3420343,3420389..3420400,
+ 3420461..3420466,3420470..3420472,3420476..3420478,
+ 3420482..3420484,3420563..3420565,3420575..3420577))
+ /locus_tag="SARI_03484"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature complement(3420563..3420565)
+ /locus_tag="SARI_03484"
+ /note="Mg2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature complement(order(3420392..3420394,3420398..3420400,
+ 3420464..3420466,3420470..3420472))
+ /locus_tag="SARI_03484"
+ /note="G-X-G motif; other site"
+ /db_xref="CDD:238030"
+ gene 3421914..3422369
+ /gene="zraP"
+ /locus_tag="SARI_03485"
+ CDS 3421914..3422369
+ /gene="zraP"
+ /locus_tag="SARI_03485"
+ /inference="similar to AA sequence:REFSEQ:NP_457902.1"
+ /note="'COG: COG3678 P pilus assembly/Cpx signaling
+ pathway, periplasmic inhibitor/zinc-resistance associated
+ protein;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="zinc resistance protein"
+ /protein_id="YP_001572452.1"
+ /db_xref="GI:161505340"
+ /translation="MKRNNKSAIALIALSLLALSSGAAFAGHHWGNNDGMWQQGGSPL
+ TTEQQASAQKIYDDYYTQTSALRQQLISKRYEYNALLTASSPDAAKINAVAKEMESLG
+ LKLDEQRVKRDVAMAQAGIPRGAGTGYGGCGGYGSGYHRGGGHMGMGHW"
+ misc_feature 3422043..3422267
+ /gene="zraP"
+ /locus_tag="SARI_03485"
+ /note="CpxP component of the bacterial Cpx-two-component
+ system and related proteins; Region: CpxP_like; cd09916"
+ /db_xref="CDD:197366"
+ misc_feature order(3422133..3422135,3422145..3422147,3422154..3422159,
+ 3422169..3422171,3422175..3422177,3422187..3422189,
+ 3422196..3422198,3422208..3422210,3422220..3422222,
+ 3422232..3422234,3422241..3422246,3422253..3422255,
+ 3422262..3422264)
+ /gene="zraP"
+ /locus_tag="SARI_03485"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:197366"
+ gene complement(3422455..3423147)
+ /locus_tag="SARI_03486"
+ CDS complement(3422455..3423147)
+ /locus_tag="SARI_03486"
+ /inference="protein motif:HMMPfam:IPR010858"
+ /inference="similar to AA sequence:REFSEQ:YP_153072.1"
+ /note="'COG: NOG06219 non supervised orthologous group;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572453.1"
+ /db_xref="GI:161505341"
+ /db_xref="InterPro:IPR010858"
+ /translation="MNSFIEGARLPLLSVWRRALLFSGALLLTACSHDASPPPFTASG
+ FAGDQGAVRIWRKDTNNEVHLLSVFSPWHSGSTTTSEYRWQGDTLSLIELNIYSKPAE
+ HIRARFDARGELSFMQREVGGQKQQLSSDQIALYRYRAKQIRQTSDALRLGRVILRQG
+ RWHADHTVTTCEGETLKPDLDSWAISHIERRQNHSSVEVSVAWLEAPEGSQLLLVANS
+ DFCRWQPQAKTF"
+ misc_feature complement(3422470..3423024)
+ /locus_tag="SARI_03486"
+ /note="Protein of unknown function (DUF1481); Region:
+ DUF1481; pfam07356"
+ /db_xref="CDD:148775"
+ gene complement(3423159..3423431)
+ /locus_tag="SARI_03487"
+ CDS complement(3423159..3423431)
+ /locus_tag="SARI_03487"
+ /inference="protein motif:BlastProDom:IPR000119"
+ /inference="protein motif:Gene3D:IPR000119"
+ /inference="protein motif:HMMPfam:IPR000119"
+ /inference="protein motif:HMMSmart:IPR000119"
+ /inference="protein motif:ScanRegExp:IPR000119"
+ /inference="protein motif:superfamily:IPR010992"
+ /inference="similar to AA sequence:INSD:AAF33503.1"
+ /note="histone-like DNA-binding protein"
+ /codon_start=1
+ /transl_table=11
+ /product="transcriptional regulator HU subunit alpha"
+ /protein_id="YP_001572454.1"
+ /db_xref="GI:161505342"
+ /db_xref="InterPro:IPR000119"
+ /db_xref="InterPro:IPR010992"
+ /translation="MNKTQLIDVIADKAELSKTQAKAALESTLAAITESLKEGDAVQL
+ VGFGTFKVNHRAERTGRNPQTGKEIKIAAANVPAFVSGKALKDAVK"
+ misc_feature complement(3423168..3423428)
+ /locus_tag="SARI_03487"
+ /note="Integration host factor (IHF) and HU are small
+ heterodimeric members of the DNABII protein family that
+ bind and bend DNA, functioning as architectural factors in
+ many cellular processes including transcription,
+ site-specific recombination, and...; Region: HU_IHF;
+ cd00591"
+ /db_xref="CDD:238332"
+ misc_feature complement(order(3423168..3423170,3423189..3423191,
+ 3423195..3423197,3423207..3423212,3423276..3423278,
+ 3423291..3423296,3423303..3423317,3423327..3423332,
+ 3423339..3423344,3423351..3423353,3423393..3423395,
+ 3423405..3423407,3423414..3423416,3423423..3423428))
+ /locus_tag="SARI_03487"
+ /note="IHF dimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238332"
+ misc_feature complement(order(3423183..3423185,3423192..3423194,
+ 3423198..3423200,3423210..3423212,3423240..3423251,
+ 3423258..3423260,3423264..3423269,3423273..3423275,
+ 3423285..3423287,3423294..3423299,3423303..3423305,
+ 3423309..3423311,3423354..3423356,3423420..3423428))
+ /locus_tag="SARI_03487"
+ /note="IHF - DNA interface [nucleotide binding]; other
+ site"
+ /db_xref="CDD:238332"
+ gene complement(3423618..3424208)
+ /locus_tag="SARI_03488"
+ CDS complement(3423618..3424208)
+ /locus_tag="SARI_03488"
+ /inference="protein motif:HMMPfam:IPR007338"
+ /inference="similar to AA sequence:INSD:CAD09475.1"
+ /note="'COG: COG3068 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572455.1"
+ /db_xref="GI:161505343"
+ /db_xref="InterPro:IPR007338"
+ /translation="MLQNPIHLRLERLESWQHVTFMACLCERMYPNYAMFCKQTEFGD
+ GQIYRRILDLIWETLTVKDAKVNFDSQLEKFEEAIPAADDYDLYGVYPAIDACVALSE
+ LIHSRLSGETLEHAIEVSKTSITTVAMLEMTQTGREMTDEELKKNPAVEQEWDIQWEI
+ FRLLADCEERDIELIKGLRADLREAGESNIGINFQQ"
+ misc_feature complement(3423627..3424208)
+ /locus_tag="SARI_03488"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG3068"
+ /db_xref="CDD:225610"
+ gene complement(3424250..3424921)
+ /locus_tag="SARI_03489"
+ CDS complement(3424250..3424921)
+ /locus_tag="SARI_03489"
+ /inference="protein motif:HMMPfam:IPR007581"
+ /inference="similar to AA sequence:INSD:AAX67955.1"
+ /note="'Selectively cleaves double-stranded DNA at the
+ second phosphodiester bond 3' to a deoxyinosine leaving
+ behind the intact lesion on the nicked DNA; cleaves DNA
+ containing urea residues, AP sites, base mismatches,
+ insertion/deletion mismatches, flaps, and pseudo-Y
+ structures'"
+ /codon_start=1
+ /transl_table=11
+ /product="endonuclease V"
+ /protein_id="YP_001572456.1"
+ /db_xref="GI:161505344"
+ /db_xref="InterPro:IPR007581"
+ /translation="MDLASLRAQQIELASSVCREDRLDKDPPAFIGGADVGFEQGGEV
+ TRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAAWEQLSQKPDLLFV
+ DGHGISHPRRLGVASHFGLLVDVPTIGVAKKRLCGKFEPLSAEPGALSALMDKGEQLA
+ WVWRSKARCNPLFIATGHRVSTDSALAWVQRCMKGYRLPEPTRWADAVASGRPAFVRW
+ QEIQR"
+ misc_feature complement(3424304..3424915)
+ /locus_tag="SARI_03489"
+ /note="Endonuclease_V, a DNA repair enzyme that initiates
+ repair of nitrosative deaminated purine bases; Region:
+ Endonuclease_V; cd06559"
+ /db_xref="CDD:143472"
+ misc_feature complement(order(3424304..3424306,3424517..3424531,
+ 3424577..3424582,3424595..3424597,3424607..3424615,
+ 3424688..3424699,3424703..3424705,3424808..3424813,
+ 3424817..3424819))
+ /locus_tag="SARI_03489"
+ /note="Active_site [active]"
+ /db_xref="CDD:143472"
+ gene complement(3424931..3425995)
+ /gene="hemE"
+ /locus_tag="SARI_03490"
+ CDS complement(3424931..3425995)
+ /gene="hemE"
+ /locus_tag="SARI_03490"
+ /inference="protein motif:BlastProDom:IPR000257"
+ /inference="protein motif:HMMPfam:IPR000257"
+ /inference="protein motif:HMMTigr:IPR006361"
+ /inference="protein motif:ScanRegExp:IPR000257"
+ /inference="similar to AA sequence:INSD:AAO70980.1"
+ /note="catalyzes the formation of coproporphyrinogen from
+ uroporphyrinogen III"
+ /codon_start=1
+ /transl_table=11
+ /product="uroporphyrinogen decarboxylase"
+ /protein_id="YP_001572457.1"
+ /db_xref="GI:161505345"
+ /db_xref="InterPro:IPR000257"
+ /db_xref="InterPro:IPR006361"
+ /translation="MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAG
+ DFMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMELGLYFEAGEGPRFTAP
+ VTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGS
+ SKAFTVIKKMMYADPQALHLLLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRD
+ YQHFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAETGCDALGLDWTTDIA
+ DARRRVGHKVALQGNMDPSMLYAPPARIEDEVATILSGFGQGEGHVFNLGHGIHQDVP
+ PEHAGVFVEAVHRLSAQYHN"
+ misc_feature complement(3424955..3425968)
+ /gene="hemE"
+ /locus_tag="SARI_03490"
+ /note="Uroporphyrinogen decarboxylase (URO-D) is a dimeric
+ cytosolic enzyme that decarboxylates the four acetate side
+ chains of uroporphyrinogen III (uro-III) to create
+ coproporphyrinogen III, without requiring any prosthetic
+ groups or cofactors. This reaction...; Region: URO-D;
+ cd00717"
+ /db_xref="CDD:238368"
+ misc_feature complement(order(3425015..3425017,3425252..3425254,
+ 3425366..3425371,3425375..3425377,3425516..3425518,
+ 3425534..3425536,3425564..3425566,3425708..3425710,
+ 3425723..3425725,3425759..3425779,3425858..3425860,
+ 3425876..3425878,3425888..3425890,3425903..3425920))
+ /gene="hemE"
+ /locus_tag="SARI_03490"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:238368"
+ misc_feature complement(order(3425015..3425017,3425369..3425371,
+ 3425534..3425536,3425765..3425767,3425903..3425905,
+ 3425915..3425917))
+ /gene="hemE"
+ /locus_tag="SARI_03490"
+ /note="active site"
+ /db_xref="CDD:238368"
+ gene complement(3426036..3426809)
+ /locus_tag="SARI_03492"
+ CDS complement(3426036..3426809)
+ /locus_tag="SARI_03492"
+ /inference="protein motif:Gene3D:IPR000086"
+ /inference="protein motif:HMMPfam:IPR000086"
+ /inference="protein motif:ScanRegExp:IPR000086"
+ /inference="protein motif:superfamily:IPR000086"
+ /inference="similar to AA sequence:SwissProt:P32664"
+ /note="'KEGG: sfl:SF4068 1.4e-52 yjaD; NADH
+ pyrophosphatase K03659;
+ COG: COG2816 NTP pyrophosphohydrolases containing a
+ Zn-finger, probably nucleic-acid-binding;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="NADH pyrophosphatase"
+ /protein_id="YP_001572458.2"
+ /db_xref="GI:448236277"
+ /db_xref="InterPro:IPR000086"
+ /translation="MDRIIEKLESGWWIVSHEQKLWLPYGELPHGPAANFDLVGQRAL
+ RIGEWQGDPVWLVLQHRRHDMGSVRQVIDQDAGLFQLAGRGVQLAEFYRSHKFCGYCG
+ YPMHRSKTEWAMLCSHCRERYYPQIAPCIIVAIRREDSLLLARHVHHRNGVHTVLAGF
+ VEVGETLEQAVAREVMEESGIKVKNLRYVTSQPWPFPQSLMTAFMAEYDSGDIVIDPK
+ ELLEANWYRYDDLPLLPPPGTVARRLVEDTVAMCRAEYD"
+ misc_feature complement(3426054..3426809)
+ /locus_tag="SARI_03492"
+ /note="NADH pyrophosphatase; Reviewed; Region: nudC;
+ PRK00241"
+ /db_xref="CDD:234699"
+ misc_feature complement(3426537..3426782)
+ /locus_tag="SARI_03492"
+ /note="NADH pyrophosphatase-like rudimentary NUDIX domain;
+ Region: NUDIX-like; pfam09296"
+ /db_xref="CDD:220167"
+ misc_feature complement(3426438..3426533)
+ /locus_tag="SARI_03492"
+ /note="NADH pyrophosphatase zinc ribbon domain; Region:
+ zf-NADH-PPase; pfam09297"
+ /db_xref="CDD:204192"
+ misc_feature complement(3426060..3426425)
+ /locus_tag="SARI_03492"
+ /note="NADH pyrophosphatase, a member of the Nudix
+ hydrolase superfamily, catalyzes the cleavage of NADH into
+ reduced nicotinamide mononucleotide (NMNH) and AMP. Like
+ other members of the Nudix family, it requires a divalent
+ cation, such as Mg2+ or Mn2+, for...; Region:
+ NADH_pyrophosphatase; cd03429"
+ /db_xref="CDD:239521"
+ misc_feature complement(order(3426207..3426209,3426213..3426215,
+ 3426219..3426221,3426228..3426230,3426330..3426338,
+ 3426420..3426422))
+ /locus_tag="SARI_03492"
+ /note="putative NADH binding site [chemical binding];
+ other site"
+ /db_xref="CDD:239521"
+ misc_feature complement(order(3426207..3426209,3426213..3426215,
+ 3426219..3426221,3426228..3426230,3426276..3426281,
+ 3426288..3426290,3426324..3426326,3426330..3426335))
+ /locus_tag="SARI_03492"
+ /note="putative active site [active]"
+ /db_xref="CDD:239521"
+ misc_feature complement(3426267..3426335)
+ /locus_tag="SARI_03492"
+ /note="nudix motif; other site"
+ /db_xref="CDD:239521"
+ misc_feature complement(order(3426153..3426155,3426276..3426281,
+ 3426288..3426290))
+ /locus_tag="SARI_03492"
+ /note="putative metal binding site [ion binding]; other
+ site"
+ /db_xref="CDD:239521"
+ gene 3426902..3427390
+ /locus_tag="SARI_03493"
+ CDS 3426902..3427390
+ /locus_tag="SARI_03493"
+ /inference="protein motif:HMMPfam:IPR007448"
+ /inference="protein motif:superfamily:IPR008928"
+ /inference="similar to AA sequence:SwissProt:Q9L9I6"
+ /note="binds specifically to the major sigma factor sigma
+ 70; active in stationary phase"
+ /codon_start=1
+ /transl_table=11
+ /product="anti-RNA polymerase sigma 70 factor"
+ /protein_id="YP_001572460.1"
+ /db_xref="GI:161505348"
+ /db_xref="InterPro:IPR007448"
+ /db_xref="InterPro:IPR008928"
+ /translation="MLNQLENLTERVGGSNKLVDRWLHVRKHLLVAYYNLVGIKPGKE
+ SYMRLNEKALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLLHAAKIWPLLEDNTQR
+ IMDYYDSSLETAIDHDNCLEFQQALSDIGEALEARFVLEDKLIMLVFDAMHDGARVKR
+ PA"
+ misc_feature 3426902..3427387
+ /locus_tag="SARI_03493"
+ /note="Regulator of sigma D [Transcription]; Region: Rsd;
+ COG3160"
+ /db_xref="CDD:225702"
+ misc_feature 3427443..3427543
+ /inference="nucleotide motif:Rfam:RF00059"
+ /note="TPP riboswitch (THI element)"
+ gene 3427630..3429525
+ /locus_tag="SARI_03494"
+ CDS 3427630..3429525
+ /locus_tag="SARI_03494"
+ /inference="protein motif:BlastProDom:IPR002817"
+ /inference="protein motif:HMMPfam:IPR002817"
+ /inference="protein motif:HMMTigr:IPR002817"
+ /inference="protein motif:superfamily:IPR009007"
+ /note="required for the synthesis of the
+ hydromethylpyrimidine moiety of thiamine"
+ /codon_start=1
+ /transl_table=11
+ /product="thiamine biosynthesis protein ThiC"
+ /protein_id="YP_001572461.1"
+ /db_xref="GI:161505349"
+ /db_xref="InterPro:IPR002817"
+ /db_xref="InterPro:IPR009007"
+ /translation="MSTTTLTRREQRAKAQHFIDTLEGTAFPNSKRIYVTGSQHDIRV
+ PMREIQLSPTLISGTKDHPQYEENEAIPVYDTSGPYGDPNIAINIQQGLAKLRQPWIE
+ ARADVETLSNRSSAYTRERLTDEGLNALRFTGLLTPKRAKAGHCVTQLHYARNGIVTP
+ EMAFIAIRENMGRERIRSEVLRHQHPGENFGARLPENITPEFVRDEVAAGRAIIPANI
+ NHPESEPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWATRWGADTVMDLSTGRYI
+ HETREWILRNSPVPIGTVPIYQALEKVNGIAEDLTWEAFRDTLLEQAEQGVDYFTIHA
+ GVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHHKENFLFEHFREICEICAAYDVSLSL
+ GDGLRPGSIQDANDDAQFAELHTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEE
+ LEHCHEAPFYTLGPLTTDIAPGYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKE
+ DVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPFTARAWH
+ DETLPHESGKVAHFCSMCGPKFCSMKISQEVRDYAAAQTIEVGMANMSESFRAKGGEI
+ YLKREEA"
+ misc_feature 3427654..3429510
+ /locus_tag="SARI_03494"
+ /note="thiamine biosynthesis protein ThiC; Provisional;
+ Region: PRK09284"
+ /db_xref="CDD:236451"
+ misc_feature 3427702..3427956
+ /locus_tag="SARI_03494"
+ /note="ThiC-associated domain; Region: ThiC-associated;
+ pfam13667"
+ /db_xref="CDD:222303"
+ misc_feature 3428062..3429435
+ /locus_tag="SARI_03494"
+ /note="Thiamine biosynthesis protein ThiC [Coenzyme
+ metabolism]; Region: ThiC; COG0422"
+ /db_xref="CDD:223499"
+ gene 3429525..3430160
+ /locus_tag="SARI_03495"
+ CDS 3429525..3430160
+ /locus_tag="SARI_03495"
+ /inference="protein motif:BlastProDom:IPR003733"
+ /inference="protein motif:HMMPfam:IPR003733"
+ /inference="protein motif:HMMPIR:IPR012264"
+ /inference="protein motif:HMMTigr:IPR003733"
+ /inference="similar to AA sequence:INSD:AAP18707.1"
+ /note="catalyzes the formation of thiamine monophosphate
+ from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate
+ and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="thiamine-phosphate pyrophosphorylase"
+ /protein_id="YP_001572462.1"
+ /db_xref="GI:161505350"
+ /db_xref="InterPro:IPR003733"
+ /db_xref="InterPro:IPR012264"
+ /translation="MYQPDFPPVPLRLGLYPVVDSVAWIECLLAAGVRTIQLRIKDKR
+ DAEVEADVVAAITLGRRYDARLFVNDYWRLAIKHQAYGVHLGQEDLKTTDLNAIRTAG
+ LRLGVSTHDDMEIDIALAARPSYIALGHVFPTQTKQMPSAPQGLEQLARHIERLADYP
+ TVAIGGISLKRAPAVLATGVGSIAVVSAITQAADWRAATAQLLAIAGVGDE"
+ misc_feature 3429567..3430136
+ /locus_tag="SARI_03495"
+ /note="Thiamine monophosphate synthase (TMP
+ synthase)/TenI. TMP synthase catalyzes an important step
+ in the thiamine biosynthesis pathway, the substitution of
+ the pyrophosphate of 2-methyl-4-amino-5-
+ hydroxymethylpyrimidine pyrophosphate by 4-methyl-5-;
+ Region: TMP_TenI; cd00564"
+ /db_xref="CDD:238317"
+ misc_feature order(3429570..3429572,3429576..3429578,3429633..3429635,
+ 3429639..3429641,3429774..3429776,3429846..3429848,
+ 3429897..3429899,3429903..3429905,3429924..3429926,
+ 3429930..3429932,3430008..3430010,3430020..3430022,
+ 3430074..3430085)
+ /locus_tag="SARI_03495"
+ /note="thiamine phosphate binding site [chemical binding];
+ other site"
+ /db_xref="CDD:238317"
+ misc_feature order(3429633..3429635,3429639..3429641,3429645..3429647,
+ 3429729..3429734,3429789..3429791,3429846..3429848,
+ 3429924..3429926,3429930..3429935,3430020..3430022,
+ 3430080..3430085)
+ /locus_tag="SARI_03495"
+ /note="active site"
+ /db_xref="CDD:238317"
+ misc_feature order(3429639..3429641,3429645..3429647,3429729..3429734,
+ 3429780..3429782,3429789..3429791,3429846..3429848,
+ 3429933..3429935)
+ /locus_tag="SARI_03495"
+ /note="pyrophosphate binding site [ion binding]; other
+ site"
+ /db_xref="CDD:238317"
+ gene 3430153..3430908
+ /locus_tag="SARI_03496"
+ CDS 3430153..3430908
+ /locus_tag="SARI_03496"
+ /inference="protein motif:HMMPfam:IPR000594"
+ /inference="protein motif:HMMPfam:IPR007901"
+ /inference="protein motif:superfamily:IPR009036"
+ /inference="similar to AA sequence:REFSEQ:YP_219030.1"
+ /note="'KEGG: eci:UTI89_C3827 2.2e-111 THIF;
+ adenylyltransferase ThiF K03148;
+ COG: COG0476 Dinucleotide-utilizing enzymes involved in
+ molybdopterin and THIamine biosynthesis family 2;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="thiamine biosynthesis protein ThiF"
+ /protein_id="YP_001572463.1"
+ /db_xref="GI:161505351"
+ /db_xref="InterPro:IPR000594"
+ /db_xref="InterPro:IPR007901"
+ /db_xref="InterPro:IPR009036"
+ /translation="MNDRDFMRYSRQILLSDIAIEGQQKLLDSHVLIVGLGGLGSPAA
+ LYLAGAGVGTLTLADDDDVHLSNLQRQILFTTDDIARPKAQAAKLRLARLNPDSKLIV
+ LKQRLAGDALKNAVARADIVLDCTDNVATRQEINAACVALNTPLITASAVGFGGQLMV
+ LTPPWAQGCYRCLWPDDGEPERNCRTAGIVGPVVGVMGALQALEAIKLLSGMETPSDE
+ LRLFDGKTSQWRNLALHRASDCPVCGGQHADSV"
+ misc_feature 3430174..3430854
+ /locus_tag="SARI_03496"
+ /note="ThiF_MoeB_HesA. Family of E1-like enzymes involved
+ in molybdopterin and thiamine biosynthesis family. The
+ common reaction mechanism catalyzed by MoeB and ThiF, like
+ other E1 enzymes, begins with a nucleophilic attack of the
+ C-terminal carboxylate of MoaD...; Region:
+ ThiF_MoeB_HesA_family; cd00757"
+ /db_xref="CDD:238386"
+ misc_feature 3430174..3430779
+ /locus_tag="SARI_03496"
+ /note="thiazole biosynthesis adenylyltransferase ThiF, E.
+ coli subfamily; Region: adenyl_thiF; TIGR02356"
+ /db_xref="CDD:162820"
+ misc_feature order(3430255..3430257,3430261..3430263,3430267..3430269,
+ 3430327..3430329,3430333..3430335,3430360..3430362,
+ 3430399..3430401,3430525..3430527,3430543..3430545)
+ /locus_tag="SARI_03496"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238386"
+ misc_feature order(3430267..3430269,3430528..3430536,3430546..3430548,
+ 3430600..3430605,3430615..3430617,3430621..3430623,
+ 3430807..3430809,3430819..3430821,3430840..3430842,
+ 3430846..3430851)
+ /locus_tag="SARI_03496"
+ /note="substrate interface [chemical binding]; other site"
+ /db_xref="CDD:238386"
+ gene 3430892..3431092
+ /locus_tag="SARI_03497"
+ CDS 3430892..3431092
+ /locus_tag="SARI_03497"
+ /inference="protein motif:Gene3D:IPR003749"
+ /inference="protein motif:HMMPfam:IPR003749"
+ /inference="protein motif:HMMTigr:IPR010035"
+ /inference="similar to AA sequence:INSD:AAF33510.1"
+ /note="'with ThiF, ThiG, and ThiO catalyzes the formation
+ of the thiazole moiety of thiamine pyrophosphate'"
+ /codon_start=1
+ /transl_table=11
+ /product="sulfur carrier protein ThiS"
+ /protein_id="YP_001572464.1"
+ /db_xref="GI:161505352"
+ /db_xref="InterPro:IPR003749"
+ /db_xref="InterPro:IPR010035"
+ /translation="MQIQFNDEPMQCAEGQTISELLTQLNQLKPGAALALNQQILPRE
+ QWRQHIVQEGDQILLFHVIAGG"
+ misc_feature 3430895..3431089
+ /locus_tag="SARI_03497"
+ /note="ThiaminS ubiquitin-like sulfur carrier protein;
+ Region: ThiS; cd00565"
+ /db_xref="CDD:176353"
+ misc_feature order(3431009..3431011,3431063..3431071)
+ /locus_tag="SARI_03497"
+ /note="thiS-thiF/thiG interaction site; other site"
+ /db_xref="CDD:176353"
+ gene 3431094..3431864
+ /gene="thiG"
+ /locus_tag="SARI_03498"
+ CDS 3431094..3431864
+ /gene="thiG"
+ /locus_tag="SARI_03498"
+ /inference="protein motif:BlastProDom:IPR000771"
+ /inference="protein motif:HMMPfam:IPR008867"
+ /inference="similar to AA sequence:REFSEQ:YP_153061.1"
+ /note="functions in thiamine (vitamin B1) biosynthesis; in
+ Bacillus subtilis this enzyme catalyzes the formation of
+ thiazole from dehydroxyglycine and
+ 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate"
+ /codon_start=1
+ /transl_table=11
+ /product="thiazole synthase"
+ /protein_id="YP_001572465.1"
+ /db_xref="GI:161505353"
+ /db_xref="InterPro:IPR000771"
+ /db_xref="InterPro:IPR008867"
+ /translation="MLRIADKTFDSHLFTGTGKFASAQLMVDAIRASGSQLVTLAMKR
+ VDLRKPNDAILSPLLEAGVTLLPNTSGAKTAEEAIFAAQLAREALGTHWLKLEIHPDA
+ RWLLPDPIETLKAAGELVKQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGSNQG
+ LETRAMLEIIIQQATVPVVVDAGIGVPSHATQALEMGADAVLVNTAIAVANDPVMMAN
+ AFRLAVEAGVLARQAVPGNRSVYASATSPLTGFLEVSA"
+ misc_feature 3431097..3431837
+ /gene="thiG"
+ /locus_tag="SARI_03498"
+ /note="Thiazole synthase (ThiG) is the tetrameric enzyme
+ that is involved in the formation of the thiazole moiety
+ of thiamin pyrophosphate, an essential ubiquitous cofactor
+ that plays an important role in carbohydrate and amino
+ acid metabolism. ThiG catalyzes...; Region: ThiG; cd04728"
+ /db_xref="CDD:240079"
+ misc_feature order(3431214..3431216,3431250..3431252,3431259..3431261)
+ /gene="thiG"
+ /locus_tag="SARI_03498"
+ /note="ThiS interaction site; other site"
+ /db_xref="CDD:240079"
+ misc_feature order(3431376..3431378,3431382..3431384,3431634..3431636)
+ /gene="thiG"
+ /locus_tag="SARI_03498"
+ /note="putative active site [active]"
+ /db_xref="CDD:240079"
+ misc_feature order(3431391..3431393,3431400..3431402,3431409..3431417,
+ 3431484..3431486,3431490..3431498,3431505..3431510,
+ 3431562..3431570,3431577..3431579,3431595..3431597,
+ 3431607..3431609,3431649..3431657,3431667..3431669,
+ 3431676..3431681,3431706..3431708,3431721..3431729,
+ 3431736..3431741,3431748..3431750,3431769..3431771,
+ 3431778..3431783,3431787..3431801,3431805..3431810,
+ 3431814..3431816,3431820..3431828,3431832..3431834)
+ /gene="thiG"
+ /locus_tag="SARI_03498"
+ /note="tetramer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:240079"
+ gene 3431861..3432994
+ /gene="thiH"
+ /locus_tag="SARI_03499"
+ CDS 3431861..3432994
+ /gene="thiH"
+ /locus_tag="SARI_03499"
+ /inference="protein motif:HMMPfam:IPR007197"
+ /inference="protein motif:HMMPfam:IPR010722"
+ /inference="protein motif:HMMTigr:IPR012726"
+ /inference="similar to AA sequence:REFSEQ:NP_457915.1"
+ /note="'in Escherichia coli this enzyme functions in
+ thiamine biosynthesis along with thiFSGI and iscS; with
+ ThiFSG catalyzes the formation of thiazole phosphate from
+ tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate;
+ forms a complex with ThiG; contains an iron-sulfur
+ center'"
+ /codon_start=1
+ /transl_table=11
+ /product="thiamine biosynthesis protein ThiH"
+ /protein_id="YP_001572466.1"
+ /db_xref="GI:161505354"
+ /db_xref="InterPro:IPR007197"
+ /db_xref="InterPro:IPR010722"
+ /db_xref="InterPro:IPR012726"
+ /translation="MKTFTDRWRQLGWDDIRLRINSKTAADVERALNASRLNREDMMA
+ LLSPAAADYLEPLAQRAQKLTRQRFGNTVSFYVPLYLSNLCANDCTYCGFSMSNRIKR
+ KTLDGVDIQRECEAIHKLGFEHLLLVTGEHQTKVGMDYFRRHLPAIRRQFSSLQMEIQ
+ PLSQENYAELKTLGIDGVMVYQETYHEAIYAQHHLKGKKQDFFWRLETPDRLGRAGID
+ KIGLGALIGLSDNWRVDCYMVAEHMLWMQKHYWQSRYSISFPRLRPCTGGVEPASVMD
+ EKQLVQTICAFRLLAPEIELSLSTRESPWFRDNVIPLAINNVSAFSKTQPGGYADDHP
+ ELEQFAPHDNRRPEAVADALTAQGLQPVWKDWDSWLGRTSQTR"
+ misc_feature 3431864..3432976
+ /gene="thiH"
+ /locus_tag="SARI_03499"
+ /note="thiamine biosynthesis protein ThiH; Reviewed;
+ Region: thiH; PRK09240"
+ /db_xref="CDD:236425"
+ misc_feature 3432095..3432718
+ /gene="thiH"
+ /locus_tag="SARI_03499"
+ /note="Radical SAM superfamily. Enzymes of this family
+ generate radicals by combining a 4Fe-4S cluster and
+ S-adenosylmethionine (SAM) in close proximity. They are
+ characterized by a conserved CxxxCxxC motif, which
+ coordinates the conserved iron-sulfur cluster; Region:
+ Radical_SAM; cd01335"
+ /db_xref="CDD:100105"
+ misc_feature order(3432113..3432115,3432119..3432121,3432125..3432127,
+ 3432131..3432139,3432242..3432244,3432248..3432253,
+ 3432338..3432340,3432401..3432403,3432533..3432535,
+ 3432635..3432640)
+ /gene="thiH"
+ /locus_tag="SARI_03499"
+ /note="FeS/SAM binding site; other site"
+ /db_xref="CDD:100105"
+ misc_feature 3432626..3432943
+ /gene="thiH"
+ /locus_tag="SARI_03499"
+ /note="Biotin and Thiamin Synthesis associated domain;
+ Region: BATS; pfam06968"
+ /db_xref="CDD:219245"
+ gene 3433293..3433421
+ /locus_tag="SARI_03500"
+ CDS 3433293..3433421
+ /locus_tag="SARI_03500"
+ /note="'COG: COG2801 Transposase and inactivated
+ derivatives;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572467.1"
+ /db_xref="GI:161505355"
+ /translation="MMPQNNGNQGRTHQGKMSCDRTPMETLLDGKRIWAEKNLSQM"
+ gene complement(3433834..3434067)
+ /locus_tag="SARI_03501"
+ CDS complement(3433834..3434067)
+ /locus_tag="SARI_03501"
+ /inference="protein motif:superfamily:IPR002110"
+ /inference="similar to AA sequence:REFSEQ:YP_406057.1"
+ /note="'COG: COG0666 FOG: Ankyrin repeat;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572468.1"
+ /db_xref="GI:161505356"
+ /db_xref="InterPro:IPR002110"
+ /translation="MKHILLTVKRFDNVPGVLIASKNGHSEAVLAYGRLLKNSCLTAD
+ KTAELLAAKNNDGVSALLIALQNGHDEVIRAYG"
+ gene 3434111..3434323
+ /locus_tag="SARI_03502"
+ CDS 3434111..3434323
+ /locus_tag="SARI_03502"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572469.1"
+ /db_xref="GI:161505357"
+ /translation="MLYENKCYEVKMKSFPAYNIPPFIINQWELLFNNQLNYLSSSYS
+ HISQGMPYIPVLNSAAILKLRCSREN"
+ gene complement(3434405..3435433)
+ /locus_tag="SARI_03503"
+ CDS complement(3434405..3435433)
+ /locus_tag="SARI_03503"
+ /inference="similar to AA sequence:INSD:AAF33527.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572470.1"
+ /db_xref="GI:161505358"
+ /translation="MEHLIVMIPPLNRYVPALSENELVKTVTNRDIQFTSFNGKDYPL
+ CLLDEKTPLLFQWFERNPARFGKNDIPIINTEKNPYLNNIIKAATIEKERVVGIFVDG
+ DFFPGQKDAFSKLEYDYENIKVIYRNDIDFSMYDKKLSEIYMENISKQESMPEEKRDY
+ HLLQLLKKELSDIQEGNDSLIKSYLLDKGHAWFDFYRNMAMLKAGQLFFEADKVGCYD
+ LSANSGCIYLDADMIITEKLGGIYIPDGIAVHVERIDGRASMENGIIAVDRNNHPALL
+ AGLEIMHTKFDADPYSDGVCNGIRKHFNYSLNENYNSFCDFIEFKHDNIIMNTSQFTQ
+ SSWARQVQ"
+ misc_feature complement(3434408..3435415)
+ /locus_tag="SARI_03503"
+ /note="type III secretion system protein; Provisional;
+ Region: PRK15384"
+ /db_xref="CDD:185282"
+ misc_feature complement(3434423..3435355)
+ /locus_tag="SARI_03503"
+ /note="non-LEE encoded effector protein NleB; Provisional;
+ Region: PRK15382"
+ /db_xref="CDD:185280"
+ gene 3435964..3436653
+ /locus_tag="SARI_03504"
+ CDS 3435964..3436653
+ /locus_tag="SARI_03504"
+ /inference="similar to AA sequence:INSD:ABB64734.1"
+ /note="'COG: NOG25759 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572471.1"
+ /db_xref="GI:161505359"
+ /translation="MELQMKIPSINNQNISFPDRINAIDIIMKTYPDVTPYFFMEKPN
+ IYDQKYISGITREQSVFKVNGYINKKAELTHYMQRMYSDSHINFKTISRDEANTSEGS
+ WLTVITGKRPMGQFSVDSLYSPVLHSLLELPNIGCKIFPKEDNSFLYIIVVYRKDCAQ
+ GEQYADRFIELYNKKRELMCDMSNESNELKTIKSELVVAREMGTILSYLPEEIDNYIS
+ KMNLLFLKKTN"
+ gene 3437089..3437298
+ /locus_tag="SARI_03505"
+ CDS 3437089..3437298
+ /locus_tag="SARI_03505"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:INSD:EAY48487.1"
+ /note="'COG: COG3385 FOG: Transposase and inactivated
+ derivatives;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572472.1"
+ /db_xref="GI:161505360"
+ /db_xref="InterPro:IPR012337"
+ /translation="MSQAQKKNPSLPEYGYAWAVIYEVAALYHSRWKIEVGFRNLKSG
+ LLDKTLVLRRRKVDLREVWGDIAGL"
+ gene 3437826..3438134
+ /locus_tag="SARI_03506"
+ CDS 3437826..3438134
+ /locus_tag="SARI_03506"
+ /inference="similar to AA sequence:REFSEQ:YP_153058.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572473.1"
+ /db_xref="GI:161505361"
+ /translation="MYEQQAFYNGEPIDFNNLDLWDKFKVTFGPNVTEKTKPNGKKNF
+ NFKYCGFSTFITSVDGVGGILAKWFANKHKASVPCIMALDNSKPGQLIHITSENEFLH
+ "
+ gene complement(3438532..3442755)
+ /locus_tag="SARI_03508"
+ CDS complement(3438532..3442755)
+ /locus_tag="SARI_03508"
+ /inference="protein motif:Gene3D:IPR000722"
+ /inference="protein motif:HMMPfam:IPR000722"
+ /inference="protein motif:HMMPfam:IPR007066"
+ /inference="protein motif:HMMPfam:IPR007080"
+ /inference="protein motif:HMMPfam:IPR007081"
+ /inference="protein motif:HMMPfam:IPR007083"
+ /inference="protein motif:HMMSmart:IPR006592"
+ /inference="protein motif:HMMTigr:IPR012754"
+ /note="DNA-dependent RNA polymerase catalyzes the
+ transcription of DNA into RNA using the four
+ ribonucleoside triphosphates as substrates. Subunit beta'
+ binds to sigma factor allowing it to bind to the -10
+ region of the promoter"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-directed RNA polymerase subunit beta'"
+ /protein_id="YP_001572474.1"
+ /db_xref="GI:161505363"
+ /db_xref="InterPro:IPR000722"
+ /db_xref="InterPro:IPR006592"
+ /db_xref="InterPro:IPR007066"
+ /db_xref="InterPro:IPR007080"
+ /db_xref="InterPro:IPR007081"
+ /db_xref="InterPro:IPR007083"
+ /db_xref="InterPro:IPR012754"
+ /translation="MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETI
+ NYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERM
+ GHIELASPTAHIWFLKSLPSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERQQIL
+ TEEQYLDALEEFGDEFDAKMGAEAIQALLKSMDLEQECETLREELNETNSETKRKKLT
+ KRIKLLEAFVQSGNKPEWMILTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRN
+ NRLKRLLDLAAPDIIVRNEKRMLQEAVDALLDNGRRGRAITGSNKRPLKSLADMIKGK
+ QGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIYGKLELRGLAT
+ TIKAAKKMVEREEAVVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLH
+ PLVCAAYNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPANGEPIIVPSQDVVL
+ GLYYMTRDCVNAKGEGMVLTGPKEAERIYRAGLASLHARVKVRITEYEKDENGEFVAT
+ TSLKDTTVGRAILWMIVPKGLPFSIVNQALGKKAISKMLNTCYRILGLKPTVIFADQT
+ MYTGFAYAARSGASVGIDDMVIPEKKHEIISEAEAEVAEIQEQFQSGLVTAGERYNKV
+ IDIWAAANDRVSKAMMDNLQTETVINRDGQEEQQVSFNSIYMMADSGARGSAAQIRQL
+ AGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTR
+ RLVDVAQDLVVTEDDCGTHEGILMTPVIEGGDVKEPLRDRVLGRVTAEDVLKPGTADI
+ LVPRNTLLHEQWCDLLEANSVDAVKVRSVVSCDTDFGVCAHCYGRDLARGHIINKGEA
+ IGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIKLSNVKSVVNSSGK
+ LVITSRNTELKLLDEFGRTKESYKVPYGAVMAKGDGEQVAGGETVANWDPHTMPVITE
+ VSGFIRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTTGGKDLRPALKIVDAQGNDV
+ LIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARIPQESGGTKDITGGLPRVADLFE
+ ARRPKEPAILAEIAGIVSFGKETKGKRRLVITPVDGSDPYEEMIPKWRQLNVFEGERV
+ ERGDVISDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQMLR
+ KATIESAGSSDFLEGEQVEYSRVKIANRELEANGKVGATFSRDLLGITKASLATESFI
+ SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGEQ
+ PATPQVTAEDASASLAELLNAGLGGSDNE"
+ misc_feature complement(3441730..3442716)
+ /locus_tag="SARI_03508"
+ /note="RNA polymerase Rpb1, domain 1; Region:
+ RNA_pol_Rpb1_1; pfam04997"
+ /db_xref="CDD:218370"
+ misc_feature complement(3440197..3442698)
+ /locus_tag="SARI_03508"
+ /note="DNA-directed RNA polymerase, beta' subunit/160
+ kD subunit [Transcription]; Region: RpoC; COG0086"
+ /db_xref="CDD:223164"
+ misc_feature complement(3441223..3442053)
+ /locus_tag="SARI_03508"
+ /note="RNA polymerase I subunit A N-terminus; Region:
+ RPOLA_N; smart00663"
+ /db_xref="CDD:214767"
+ misc_feature complement(3440824..3441291)
+ /locus_tag="SARI_03508"
+ /note="RNA polymerase Rpb1, domain 3; Region:
+ RNA_pol_Rpb1_3; pfam04983"
+ /db_xref="CDD:218361"
+ misc_feature complement(3440464..3440739)
+ /locus_tag="SARI_03508"
+ /note="RNA polymerase Rpb1, domain 4; Region:
+ RNA_pol_Rpb1_4; pfam05000"
+ /db_xref="CDD:218372"
+ misc_feature complement(<3439600..3440460)
+ /locus_tag="SARI_03508"
+ /note="RNA polymerase Rpb1, domain 5; Region:
+ RNA_pol_Rpb1_5; pfam04998"
+ /db_xref="CDD:147266"
+ misc_feature complement(<3439939..3440037)
+ /locus_tag="SARI_03508"
+ /note="Largest subunit of RNA polymerase (RNAP),
+ C-terminal domain; Region: RNAP_largest_subunit_C;
+ cl11429"
+ /db_xref="CDD:142634"
+ misc_feature complement(3440017..3440019)
+ /locus_tag="SARI_03508"
+ /note="Rpb1 - Rpb6 interaction site [polypeptide binding];
+ other site"
+ /db_xref="CDD:132719"
+ misc_feature complement(<3439306..3439374)
+ /locus_tag="SARI_03508"
+ /note="Largest subunit of RNA polymerase (RNAP),
+ C-terminal domain; Region: RNAP_largest_subunit_C;
+ cl11429"
+ /db_xref="CDD:142634"
+ misc_feature complement(3438667..>3439107)
+ /locus_tag="SARI_03508"
+ /note="Largest subunit (beta') of Bacterial
+ DNA-dependent RNA polymerase (RNAP), C-terminal domain;
+ Region: RNAP_beta'_C; cd02655"
+ /db_xref="CDD:132721"
+ misc_feature complement(order(3438775..3438780,3438823..3438825))
+ /locus_tag="SARI_03508"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:132721"
+ misc_feature complement(order(3438673..3438675,3438685..3438690,
+ 3438697..3438699,3438715..3438717,3438733..3438735))
+ /locus_tag="SARI_03508"
+ /note="Rpb1 (beta') - Rpb2 (beta) interaction site
+ [polypeptide binding]; other site"
+ /db_xref="CDD:132721"
+ gene complement(3442832..3446860)
+ /gene="rpoB"
+ /locus_tag="SARI_03509"
+ CDS complement(3442832..3446860)
+ /gene="rpoB"
+ /locus_tag="SARI_03509"
+ /inference="protein motif:HMMPfam:IPR007120"
+ /inference="protein motif:HMMPfam:IPR007641"
+ /inference="protein motif:HMMPfam:IPR007642"
+ /inference="protein motif:HMMPfam:IPR007644"
+ /inference="protein motif:HMMPfam:IPR007645"
+ /inference="protein motif:HMMTigr:IPR010243"
+ /inference="protein motif:ScanRegExp:IPR007121"
+ /note="DNA-dependent RNA polymerase catalyzes the
+ transcription of DNA into RNA using the four
+ ribonucleoside triphosphates as substrates; beta subunit
+ is part of the catalytic core which binds with a sigma
+ factor to produce the holoenzyme"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-directed RNA polymerase subunit beta"
+ /protein_id="YP_001572476.2"
+ /db_xref="GI:448236278"
+ /db_xref="InterPro:IPR007120"
+ /db_xref="InterPro:IPR007121"
+ /db_xref="InterPro:IPR007641"
+ /db_xref="InterPro:IPR007642"
+ /db_xref="InterPro:IPR007644"
+ /db_xref="InterPro:IPR007645"
+ /db_xref="InterPro:IPR010243"
+ /translation="MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPE
+ GQYGLEAAFRSVFPIQSYSGNSELQYVSYRLGEPVFDVQECQIRGVTYSAPLRVKLRL
+ VIYEREAPEGTVKDIKEQEVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSD
+ KGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTE
+ QILDLFFEKVVFEIRDNKLQMELIPERLRGETASFDIEANGKVYVEKGRRITARHIRQ
+ LEKDDIKHIEVPVEYIAGKVVSKDYVDESTGELICAANMELSLDLLAKLSQSGHKRIE
+ TLFTNDLDHGPYISETVRVDPTNDRLSALVEIYRMMRPGEPPTREAAESLFENLFFSE
+ DRYDLSAVGRMKFNRSLLRDEIEGSGILSKDDIIDVMKKLIDIRNGKGEVDDIDHLGN
+ RRIRSVGEMAENQFRVGLVRVERAVKERLSLGDLDTLMPQDMINAKPISAAVKEFFGS
+ SQLSQFMDQNNPLSEITHKRRISALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEG
+ PNIGLINSLSVYAQTNEYGFLETPYRRVVDGVVTDEIHYLSAIEEGNYVIAQANSNLD
+ DEGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQVVSVGASLIPFLEHDDANRALMG
+ ANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKRGGTVQYVDASRIVIKVNEDE
+ MYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPVERGDVLADGPSTDLGELALGQ
+ NMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVSRDTKLGPEEITADIPN
+ VGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVK
+ DSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDLSEELQILEAGLF
+ SRIRAVLVSGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDELKHEFEKKLE
+ AKRRKITQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKINPIEDMPYD
+ ENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAKLREFIQ
+ RAYDLGADVRQKVDLSTFSDDEVLRLAENLRKGMPIATPVFDGAKEAEIKELLKLGDL
+ PTSGQITLFDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGK
+ AQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
+ ESFNVLLKEIRSLGINIELEDE"
+ misc_feature complement(<3444038..3446860)
+ /gene="rpoB"
+ /locus_tag="SARI_03509"
+ /note="DNA-directed RNA polymerase subunit beta; Reviewed;
+ Region: rpoB; PRK00405"
+ /db_xref="CDD:234749"
+ misc_feature complement(<3446186..3446782)
+ /gene="rpoB"
+ /locus_tag="SARI_03509"
+ /note="RNA polymerase beta subunit. RNA polymerases
+ catalyse the DNA dependent polymerization of RNA.
+ Prokaryotes contain a single RNA polymerase compared to
+ three in eukaryotes (not including mitochondrial. and
+ chloroplast polymerases). Each RNA polymerase...; Region:
+ RNA_pol_B_RPB2; cl17585"
+ /db_xref="CDD:248139"
+ misc_feature complement(3445499..>3445867)
+ /gene="rpoB"
+ /locus_tag="SARI_03509"
+ /note="RNA polymerase Rpb2, domain 2; Region:
+ RNA_pol_Rpb2_2; pfam04561"
+ /db_xref="CDD:218151"
+ misc_feature complement(<3444728..>3445594)
+ /gene="rpoB"
+ /locus_tag="SARI_03509"
+ /note="RNA polymerase beta subunit. RNA polymerases
+ catalyse the DNA dependent polymerization of RNA.
+ Prokaryotes contain a single RNA polymerase compared to
+ three in eukaryotes (not including mitochondrial. and
+ chloroplast polymerases). Each RNA polymerase...; Region:
+ RNA_pol_B_RPB2; cd00653"
+ /db_xref="CDD:238353"
+ misc_feature complement(<3444038..3444718)
+ /gene="rpoB"
+ /locus_tag="SARI_03509"
+ /note="RNA polymerase Rpb2, domain 6; Region:
+ RNA_pol_Rpb2_6; pfam00562"
+ /db_xref="CDD:215994"
+ misc_feature complement(3442841..>3443740)
+ /gene="rpoB"
+ /locus_tag="SARI_03509"
+ /note="RNA polymerase beta subunit. RNA polymerases
+ catalyse the DNA dependent polymerization of RNA.
+ Prokaryotes contain a single RNA polymerase compared to
+ three in eukaryotes (not including mitochondrial. and
+ chloroplast polymerases). Each RNA polymerase...; Region:
+ RNA_pol_B_RPB2; cd00653"
+ /db_xref="CDD:238353"
+ misc_feature complement(order(3443189..3443191,3443195..3443218,
+ 3443591..3443596,3443600..3443602,3443609..3443617,
+ 3443690..3443692,3443696..3443698))
+ /gene="rpoB"
+ /locus_tag="SARI_03509"
+ /note="RPB3 interaction site [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238353"
+ misc_feature complement(order(3442841..3442843,3442847..3442849,
+ 3442853..3442864,3442868..3442870,3442874..3442879,
+ 3442883..3442885,3442889..3442891,3442901..3442903,
+ 3442970..3442972,3442982..3442999,3443003..3443020,
+ 3443024..3443026,3443030..3443035,3443039..3443041,
+ 3443051..3443059,3443120..3443125,3443129..3443137,
+ 3443144..3443146,3443183..3443185,3443189..3443197,
+ 3443219..3443221,3443300..3443302,3443513..3443515,
+ 3443525..3443527,3443540..3443542,3443549..3443551,
+ 3443558..3443560,3443564..3443566,3443630..3443632,
+ 3443636..3443638,3443642..3443644))
+ /gene="rpoB"
+ /locus_tag="SARI_03509"
+ /note="RPB1 interaction site [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238353"
+ misc_feature complement(order(3443213..3443215,3443618..3443620))
+ /gene="rpoB"
+ /locus_tag="SARI_03509"
+ /note="RPB11 interaction site [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238353"
+ misc_feature complement(order(3443180..3443182,3443231..3443233,
+ 3443486..3443488,3443492..3443497,3443576..3443578,
+ 3443615..3443617))
+ /gene="rpoB"
+ /locus_tag="SARI_03509"
+ /note="RPB10 interaction site [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238353"
+ gene complement(3447178..3447549)
+ /gene="rplL"
+ /locus_tag="SARI_03511"
+ CDS complement(3447178..3447549)
+ /gene="rplL"
+ /locus_tag="SARI_03511"
+ /inference="protein motif:BlastProDom:IPR013823"
+ /inference="protein motif:Gene3D:IPR013823"
+ /inference="protein motif:HMMPanther:IPR000206"
+ /inference="protein motif:HMMPfam:IPR013823"
+ /inference="protein motif:HMMTigr:IPR000206"
+ /inference="protein motif:superfamily:IPR008932"
+ /inference="similar to AA sequence:INSD:AAO70991.1"
+ /note="'present in two forms; L12 is normal, while L7 is
+ aminoacylated at the N-terminal serine; the only multicopy
+ ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two
+ L12 dimers bind L10; critically important for translation
+ efficiency and fidelity; stimulates GTPase activity of
+ translation factors'"
+ /codon_start=1
+ /transl_table=11
+ /product="50S ribosomal protein L7/L12"
+ /protein_id="YP_001572478.1"
+ /db_xref="GI:161505366"
+ /db_xref="InterPro:IPR000206"
+ /db_xref="InterPro:IPR008932"
+ /db_xref="InterPro:IPR013823"
+ /translation="MSITKDQIIEAVAAMSVMDVVELITAMEEKFGVSAAAAVAVAGA
+ GAAAEAAEEKTEFDVILKAAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVS
+ KDDAEALKKSLEEAGAEVEVK"
+ misc_feature complement(3447184..3447543)
+ /gene="rplL"
+ /locus_tag="SARI_03511"
+ /note="Ribosomal protein L7/L12. Ribosomal protein L7/L12
+ refers to the large ribosomal subunit proteins L7 and L12,
+ which are identical except that L7 is acetylated at the N
+ terminus. It is a component of the L7/L12 stalk, which is
+ located at the surface of...; Region: Ribosomal_L7_L12;
+ cd00387"
+ /db_xref="CDD:100102"
+ misc_feature complement(order(3447235..3447237,3447244..3447246,
+ 3447250..3447255,3447295..3447300,3447304..3447306,
+ 3447310..3447315,3447319..3447321,3447382..3447387,
+ 3447415..3447423,3447427..3447432,3447439..3447441,
+ 3447466..3447468,3447475..3447477,3447484..3447489,
+ 3447496..3447504,3447541..3447543))
+ /gene="rplL"
+ /locus_tag="SARI_03511"
+ /note="core dimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:100102"
+ misc_feature complement(order(3447457..3447459,3447472..3447474,
+ 3447511..3447513,3447523..3447525,3447532..3447534))
+ /gene="rplL"
+ /locus_tag="SARI_03511"
+ /note="peripheral dimer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:100102"
+ misc_feature complement(order(3447457..3447459,3447466..3447468,
+ 3447478..3447483,3447490..3447492))
+ /gene="rplL"
+ /locus_tag="SARI_03511"
+ /note="L10 interface [polypeptide binding]; other site"
+ /db_xref="CDD:100102"
+ misc_feature complement(order(3447289..3447291,3447298..3447303,
+ 3447322..3447324,3447331..3447336,3447343..3447348))
+ /gene="rplL"
+ /locus_tag="SARI_03511"
+ /note="L11 interface [polypeptide binding]; other site"
+ /db_xref="CDD:100102"
+ misc_feature complement(order(3447289..3447291,3447298..3447303,
+ 3447322..3447324,3447331..3447333,3447343..3447345))
+ /gene="rplL"
+ /locus_tag="SARI_03511"
+ /note="putative EF-Tu interaction site [polypeptide
+ binding]; other site"
+ /db_xref="CDD:100102"
+ misc_feature complement(order(3447322..3447324,3447331..3447336,
+ 3447343..3447345))
+ /gene="rplL"
+ /locus_tag="SARI_03511"
+ /note="putative EF-G interaction site [polypeptide
+ binding]; other site"
+ /db_xref="CDD:100102"
+ unsure 3447484..3447517
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(3447616..3448113)
+ /gene="rplJ"
+ /locus_tag="SARI_03512"
+ CDS complement(3447616..3448113)
+ /gene="rplJ"
+ /locus_tag="SARI_03512"
+ /inference="protein motif:HMMPfam:IPR001790"
+ /inference="protein motif:ScanRegExp:IPR002363"
+ /inference="similar to AA sequence:INSD:CAD09489.1"
+ /note="binds the two ribosomal protein L7/L12 dimers and
+ anchors them to the large ribosomal subunit"
+ /codon_start=1
+ /transl_table=11
+ /product="50S ribosomal protein L10"
+ /protein_id="YP_001572479.1"
+ /db_xref="GI:161505367"
+ /db_xref="InterPro:IPR001790"
+ /db_xref="InterPro:IPR002363"
+ /translation="MALNLQDKQAIVAEVSEVAKGALSAVVADSRGVTVDKMTELRKA
+ GREAGVYMRVVRNTLLRRVVEGTQFECLKDTFVGPTLIAYSMEHPGAAARLFKEFAKA
+ NAKFEVKAAAFEGELIPASQIDRLATLPTYEEAIARLMATMKEASAGKLVRTLAAVRD
+ AKEAA"
+ misc_feature complement(3447634..3448104)
+ /gene="rplJ"
+ /locus_tag="SARI_03512"
+ /note="Ribosomal protein L10 family, L10 subfamily;
+ composed of bacterial 50S ribosomal protein and eukaryotic
+ mitochondrial 39S ribosomal protein, L10. L10 occupies the
+ L7/L12 stalk of the ribosome. The N-terminal domain (NTD)
+ of L10 interacts with L11 protein...; Region:
+ Ribosomal_L10; cd05797"
+ /db_xref="CDD:240223"
+ misc_feature complement(order(3447928..3447930,3447937..3447948,
+ 3448078..3448080,3448087..3448092))
+ /gene="rplJ"
+ /locus_tag="SARI_03512"
+ /note="23S rRNA interface [nucleotide binding]; other
+ site"
+ /db_xref="CDD:240223"
+ misc_feature complement(order(3447637..3447642,3447646..3447651,
+ 3447658..3447666,3447670..3447678,3447682..3447690,
+ 3447694..3447699,3447706..3447711,3447718..3447720,
+ 3447766..3447768,3447775..3447777,3447844..3447846))
+ /gene="rplJ"
+ /locus_tag="SARI_03512"
+ /note="Interface with L7/L12 ribosomal proteins
+ [polypeptide binding]; other site"
+ /db_xref="CDD:240223"
+ gene complement(3448406..3449110)
+ /gene="rplA"
+ /locus_tag="SARI_03514"
+ CDS complement(3448406..3449110)
+ /gene="rplA"
+ /locus_tag="SARI_03514"
+ /inference="protein motif:BlastProDom:IPR002143"
+ /inference="protein motif:HMMPanther:IPR005878"
+ /inference="protein motif:HMMPfam:IPR002143"
+ /inference="protein motif:HMMTigr:IPR005878"
+ /inference="protein motif:ScanRegExp:IPR002143"
+ /inference="similar to AA sequence:INSD:EAY46092.1"
+ /note="'in Escherichia coli and Methanococcus, this
+ protein autoregulates expression; the binding site in the
+ mRNA mimics the binding site in the 23S rRNA'"
+ /codon_start=1
+ /transl_table=11
+ /product="50S ribosomal protein L1"
+ /protein_id="YP_001572480.1"
+ /db_xref="GI:161505369"
+ /db_xref="InterPro:IPR002143"
+ /db_xref="InterPro:IPR005878"
+ /translation="MAKLTKRMRVIREKVDATKQYDINEAISLLKELATAKFVESVDV
+ AVNLGIDARKSDQNVRGATVLPHGTGRSVRVAVFTQGANAEAAKAAGAELVGMEDLAE
+ QIKKGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQ
+ VRYRNDKNGIIHTTIGKVDFDADKLKENLEALLVALKKAKPSQAKGVYIKKVSISTTM
+ GAGVAVDQAGLSASAN"
+ misc_feature complement(3448439..3449044)
+ /gene="rplA"
+ /locus_tag="SARI_03514"
+ /note="Ribosomal protein L1. The L1 protein, located near
+ the E-site of the ribosome, forms part of the L1 stalk
+ along with 23S rRNA. In bacteria and archaea, L1
+ functions both as a ribosomal protein that binds rRNA, and
+ as a translation repressor that binds...; Region:
+ Ribosomal_L1; cd00403"
+ /db_xref="CDD:238235"
+ misc_feature complement(order(3448448..3448450,3448454..3448459,
+ 3448595..3448597,3448601..3448603,3448607..3448609,
+ 3448970..3448972,3448976..3448978,3448982..3448984,
+ 3448988..3448990,3448997..3449005))
+ /gene="rplA"
+ /locus_tag="SARI_03514"
+ /note="mRNA/rRNA interface [nucleotide binding]; other
+ site"
+ /db_xref="CDD:238235"
+ gene 3448595..3449614
+ /locus_tag="SARI_03513"
+ CDS 3448595..3449614
+ /locus_tag="SARI_03513"
+ /inference="similar to AA sequence:INSD:EAY46115.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572481.1"
+ /db_xref="GI:161505368"
+ /translation="MDNAVFVVTVTNLTGFSVLNRFSNVRGNRTDFWVWHQAARTQNL
+ AQLANNAHCIRRSNNNVKVHFALLDLFSQILHTYQFSAGSFRSFSVCALGKYGYANGT
+ ASTVRQYSRATHVLVRFTCIDAEVNGNINAFYEFSSGQLFQQRDSFVDVVLFGRINFL
+ ADHTHALGQFSHFLVLHYQAHGTCSTFDGASHRFNVGTGHVGSFGLRDFLQLSAGNFT
+ YFVFVRLAGTRLDTSRFFQQNSCRRRFGNEGERAVSVNGNNNRNRQTFFDGIRFCVER
+ FAEFHDVHTLLTQCWTNRRTRVRHTSCNLQLDVGLYFLSHSKFLELGSIASKKLPVIN
+ IALWA"
+ gene complement(3449114..3449542)
+ /gene="rplK"
+ /locus_tag="SARI_03515"
+ CDS complement(3449114..3449542)
+ /gene="rplK"
+ /locus_tag="SARI_03515"
+ /inference="protein motif:BlastProDom:IPR000911"
+ /inference="protein motif:Gene3D:IPR000911"
+ /inference="protein motif:HMMPanther:IPR000911"
+ /inference="protein motif:HMMPfam:IPR000911"
+ /inference="protein motif:HMMSmart:IPR000911"
+ /inference="protein motif:HMMTigr:IPR006519"
+ /inference="protein motif:ScanRegExp:IPR000911"
+ /inference="protein motif:superfamily:IPR000911"
+ /inference="similar to AA sequence:INSD:EAY46091.1"
+ /note="binds directly to 23S ribosomal RNA"
+ /codon_start=1
+ /transl_table=11
+ /product="50S ribosomal protein L11"
+ /protein_id="YP_001572482.1"
+ /db_xref="GI:161505370"
+ /db_xref="InterPro:IPR000911"
+ /db_xref="InterPro:IPR006519"
+ /translation="MAKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNA
+ KTDSIEKGLPIPVVITVYADRSFTFVTKTPPAAVLLKKAAGIKSGSGKPNKDKVGKIS
+ RAQLQEIAQTKAADMTGADIEAMTRSIEGTARSMGLVVED"
+ misc_feature complement(3449117..3449542)
+ /gene="rplK"
+ /locus_tag="SARI_03515"
+ /note="50S ribosomal protein L11; Validated; Region: rplK;
+ PRK00140"
+ /db_xref="CDD:234661"
+ misc_feature complement(3449123..3449518)
+ /gene="rplK"
+ /locus_tag="SARI_03515"
+ /note="Ribosomal protein L11. Ribosomal protein L11,
+ together with proteins L10 and L7/L12, and 23S rRNA, form
+ the L7/L12 stalk on the surface of the large subunit of
+ the ribosome. The homologous eukaryotic cytoplasmic
+ protein is also called 60S ribosomal...; Region:
+ Ribosomal_L11; cd00349"
+ /db_xref="CDD:100101"
+ misc_feature complement(order(3449135..3449143,3449147..3449152,
+ 3449159..3449164,3449171..3449173,3449183..3449191,
+ 3449204..3449206,3449279..3449281,3449300..3449302,
+ 3449312..3449320,3449453..3449455,3449513..3449515))
+ /gene="rplK"
+ /locus_tag="SARI_03515"
+ /note="23S rRNA interface [nucleotide binding]; other
+ site"
+ /db_xref="CDD:100101"
+ misc_feature complement(order(3449186..3449191,3449198..3449203,
+ 3449333..3449338,3449342..3449344,3449354..3449365,
+ 3449369..3449371,3449513..3449515))
+ /gene="rplK"
+ /locus_tag="SARI_03515"
+ /note="L7/L12 interface [polypeptide binding]; other site"
+ /db_xref="CDD:100101"
+ misc_feature complement(order(3449453..3449455,3449465..3449467))
+ /gene="rplK"
+ /locus_tag="SARI_03515"
+ /note="putative thiostrepton binding site; other site"
+ /db_xref="CDD:100101"
+ misc_feature complement(order(3449252..3449254,3449261..3449263))
+ /gene="rplK"
+ /locus_tag="SARI_03515"
+ /note="L25 interface [polypeptide binding]; other site"
+ /db_xref="CDD:100101"
+ gene complement(3449700..3450245)
+ /gene="nusG"
+ /locus_tag="SARI_03516"
+ CDS complement(3449700..3450245)
+ /gene="nusG"
+ /locus_tag="SARI_03516"
+ /inference="protein motif:HMMPfam:IPR001062"
+ /inference="protein motif:HMMPfam:IPR005824"
+ /inference="protein motif:HMMSmart:IPR006645"
+ /inference="protein motif:HMMSmart:IPR006646"
+ /inference="protein motif:HMMTigr:IPR001062"
+ /inference="protein motif:ScanRegExp:IPR001062"
+ /inference="protein motif:superfamily:IPR008991"
+ /inference="similar to AA sequence:INSD:ABJ03445.1"
+ /note="Modulates Rho-dependent transcription termination"
+ /codon_start=1
+ /transl_table=11
+ /product="transcription antitermination protein NusG"
+ /protein_id="YP_001572483.1"
+ /db_xref="GI:161505371"
+ /db_xref="InterPro:IPR001062"
+ /db_xref="InterPro:IPR005824"
+ /db_xref="InterPro:IPR006645"
+ /db_xref="InterPro:IPR006646"
+ /db_xref="InterPro:IPR008991"
+ /translation="MSEAPKKRWYVVQAFSGFEGRVATSLREHIKLHNMEELFGEVMV
+ PTEEVVEIRGGQRRKSERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGGTSDRPAP
+ ISDKEVDAIMNRLQQVGDKPRPKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKV
+ SVSIFGRATPVELDFSQVEKA"
+ misc_feature complement(3449706..3450242)
+ /gene="nusG"
+ /locus_tag="SARI_03516"
+ /note="transcription antitermination protein NusG;
+ Validated; Region: nusG; PRK05609"
+ /db_xref="CDD:180161"
+ misc_feature complement(3449901..3450224)
+ /gene="nusG"
+ /locus_tag="SARI_03516"
+ /note="Bacterial N-Utilization Substance G (NusG)
+ N-terminal (NGN) domain, subgroup 1; Region: NGN_Bact_1;
+ cd09891"
+ /db_xref="CDD:193580"
+ misc_feature complement(order(3449913..3449915,3449937..3449939,
+ 3450036..3450038,3450042..3450044,3450051..3450053,
+ 3450111..3450113,3450213..3450215))
+ /gene="nusG"
+ /locus_tag="SARI_03516"
+ /note="putative homodimer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:193580"
+ misc_feature complement(3449706..3449873)
+ /gene="nusG"
+ /locus_tag="SARI_03516"
+ /note="NusG contains an NGN domain at its N-terminus and
+ KOW motif at its C-terminus; Region: KOW_NusG; cd06091"
+ /db_xref="CDD:240515"
+ misc_feature complement(order(3449715..3449720,3449730..3449741,
+ 3449745..3449753,3449778..3449780,3449814..3449816,
+ 3449823..3449837))
+ /gene="nusG"
+ /locus_tag="SARI_03516"
+ /note="heterodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:240515"
+ misc_feature complement(3449826..3449837)
+ /gene="nusG"
+ /locus_tag="SARI_03516"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:240515"
+ gene complement(3450247..3450630)
+ /gene="secE"
+ /locus_tag="SARI_03517"
+ CDS complement(3450247..3450630)
+ /gene="secE"
+ /locus_tag="SARI_03517"
+ /inference="protein motif:FPrintScan:IPR005807"
+ /inference="protein motif:HMMPfam:IPR001901"
+ /inference="protein motif:HMMTigr:IPR005807"
+ /inference="protein motif:ScanRegExp:IPR001901"
+ /inference="similar to AA sequence:INSD:AAX67937.1"
+ /note="'forms a complex with SecY and SecG; SecYEG forms a
+ putative protein-conducting channel to which secA binds
+ and translocates targeted polypeptides across the
+ cytoplasmic membrane, a process driven by ATP and a
+ proton-motive force'"
+ /codon_start=1
+ /transl_table=11
+ /product="preprotein translocase subunit SecE"
+ /protein_id="YP_001572484.1"
+ /db_xref="GI:161505372"
+ /db_xref="InterPro:IPR001901"
+ /db_xref="InterPro:IPR005807"
+ /translation="MSANTEAQGSGRGLEAMKWIVVAILLIVAIVGNYLYRDMMLPLR
+ ALAVVILIAAAGGVALLTTKGKATVAFAREARTEVRKVIWPTRQETLHTTLIVAAVTA
+ VMSLILWGLDGILVRLVSFITGLRF"
+ misc_feature complement(3450259..3450534)
+ /gene="secE"
+ /locus_tag="SARI_03517"
+ /note="preprotein translocase subunit SecE; Reviewed;
+ Region: secE; PRK05740"
+ /db_xref="CDD:235587"
+ unsure 3450509..3450609
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(3450860..3452044)
+ /locus_tag="SARI_03518"
+ CDS complement(3450860..3452044)
+ /locus_tag="SARI_03518"
+ /inference="protein motif:HMMPanther:IPR004541"
+ /inference="protein motif:HMMPfam:IPR000795"
+ /inference="protein motif:HMMPfam:IPR004160"
+ /inference="protein motif:HMMPfam:IPR004161"
+ /inference="protein motif:HMMTigr:IPR004541"
+ /inference="protein motif:HMMTigr:IPR005225"
+ /inference="protein motif:ScanRegExp:IPR000795"
+ /inference="protein motif:superfamily:IPR009001"
+ /inference="similar to AA sequence:INSD:AAV79127.1"
+ /note="'EF-Tu; promotes GTP-dependent binding of
+ aminoacyl-tRNA to the A-site of ribosomes during protein
+ biosynthesis; when the tRNA anticodon matches the mRNA
+ codon, GTP hydrolysis results; the inactive EF-Tu-GDP
+ leaves the ribosome and release of GDP is promoted by
+ elongation factor Ts; many prokaryotes have two copies of
+ the gene encoding EF-Tu'"
+ /codon_start=1
+ /transl_table=11
+ /product="elongation factor Tu"
+ /protein_id="YP_001572485.1"
+ /db_xref="GI:161505373"
+ /db_xref="InterPro:IPR000795"
+ /db_xref="InterPro:IPR004160"
+ /db_xref="InterPro:IPR004161"
+ /db_xref="InterPro:IPR004541"
+ /db_xref="InterPro:IPR005225"
+ /db_xref="InterPro:IPR009001"
+ /translation="MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAA
+ RAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVDCPGHADYVKNMITGAAQMDGA
+ ILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQ
+ YDFPGDDTPIVRGSALKALEGDAEWEAKIIELAGFLDSYIPEPERAIDKPFLLPIEDV
+ FSISGRGTVVTGRVERGIIKVGEEVEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVG
+ VLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFR
+ TTDVTGTIELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKV
+ LG"
+ misc_feature complement(3450866..3452044)
+ /locus_tag="SARI_03518"
+ /note="elongation factor Tu; Reviewed; Region: PRK00049"
+ /db_xref="CDD:234596"
+ misc_feature complement(3451436..3452014)
+ /locus_tag="SARI_03518"
+ /note="Elongation Factor Tu (EF-Tu) GTP-binding proteins;
+ Region: EF_Tu; cd01884"
+ /db_xref="CDD:206671"
+ misc_feature complement(3451967..3451990)
+ /locus_tag="SARI_03518"
+ /note="G1 box; other site"
+ /db_xref="CDD:206671"
+ misc_feature complement(order(3451505..3451510,3451586..3451588,
+ 3451598..3451600,3451691..3451693,3451700..3451711,
+ 3451715..3451720,3451787..3451792,3451844..3451849,
+ 3451931..3451933,3451943..3451948,3451955..3451957,
+ 3451964..3451969,3451979..3451981,3451985..3451987))
+ /locus_tag="SARI_03518"
+ /note="GEF interaction site [polypeptide binding]; other
+ site"
+ /db_xref="CDD:206671"
+ misc_feature complement(order(3451517..3451525,3451628..3451630,
+ 3451634..3451639,3451904..3451906,3451964..3451981))
+ /locus_tag="SARI_03518"
+ /note="GTP/Mg2+ binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:206671"
+ misc_feature complement(3451847..3451879)
+ /locus_tag="SARI_03518"
+ /note="Switch I region; other site"
+ /db_xref="CDD:206671"
+ misc_feature complement(3451859..3451861)
+ /locus_tag="SARI_03518"
+ /note="G2 box; other site"
+ /db_xref="CDD:206671"
+ misc_feature complement(3451793..3451804)
+ /locus_tag="SARI_03518"
+ /note="G3 box; other site"
+ /db_xref="CDD:206671"
+ misc_feature complement(3451742..3451798)
+ /locus_tag="SARI_03518"
+ /note="Switch II region; other site"
+ /db_xref="CDD:206671"
+ misc_feature complement(3451628..3451639)
+ /locus_tag="SARI_03518"
+ /note="G4 box; other site"
+ /db_xref="CDD:206671"
+ misc_feature complement(3451517..3451525)
+ /locus_tag="SARI_03518"
+ /note="G5 box; other site"
+ /db_xref="CDD:206671"
+ misc_feature complement(3451154..3451414)
+ /locus_tag="SARI_03518"
+ /note="EFTU_II: Elongation factor Tu domain II. Elongation
+ factors Tu (EF-Tu) are three-domain GTPases with an
+ essential function in the elongation phase of mRNA
+ translation. The GTPase center of EF-Tu is in the
+ N-terminal domain (domain I), also known as the...;
+ Region: EFTU_II; cd03697"
+ /db_xref="CDD:239668"
+ misc_feature complement(3450878..3451147)
+ /locus_tag="SARI_03518"
+ /note="Domain III of elongation factor (EF) Tu. Ef-Tu
+ consists of three structural domains, designated I, II and
+ III. Domain III adopts a beta barrel structure. Domain III
+ is involved in binding to both charged tRNA and binding to
+ elongation factor Ts (EF-Ts); Region: EFTU_III; cd03707"
+ /db_xref="CDD:239678"
+ misc_feature complement(order(3450887..3450889,3450917..3450925,
+ 3451043..3451045,3451097..3451105,3451109..3451111))
+ /locus_tag="SARI_03518"
+ /note="Antibiotic Binding Site [chemical binding]; other
+ site"
+ /db_xref="CDD:239678"
+ gene complement(3452161..3452233)
+ /locus_tag="SARI_03519"
+ tRNA complement(3452161..3452233)
+ /locus_tag="SARI_03519"
+ /product="tRNA-Thr"
+ gene complement(3452243..3452314)
+ /locus_tag="SARI_03520"
+ tRNA complement(3452243..3452314)
+ /locus_tag="SARI_03520"
+ /product="tRNA-Gly"
+ gene complement(3452434..3452515)
+ /locus_tag="SARI_03521"
+ tRNA complement(3452434..3452515)
+ /locus_tag="SARI_03521"
+ /product="tRNA-Tyr"
+ gene complement(3452527..3452599)
+ /locus_tag="SARI_03522"
+ tRNA complement(3452527..3452599)
+ /locus_tag="SARI_03522"
+ /product="tRNA-Thr"
+ gene 3452980..3453951
+ /locus_tag="SARI_03523"
+ CDS 3452980..3453951
+ /locus_tag="SARI_03523"
+ /inference="protein motif:HMMPfam:IPR006083"
+ /inference="protein motif:HMMPIR:IPR004566"
+ /inference="protein motif:HMMTigr:IPR004566"
+ /inference="similar to AA sequence:REFSEQ:YP_219014.1"
+ /note="catalyzes the formation of
+ (R)-4'-phosphopantothenate in coenzyme A biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="pantothenate kinase"
+ /protein_id="YP_001572486.1"
+ /db_xref="GI:161505374"
+ /db_xref="InterPro:IPR004566"
+ /db_xref="InterPro:IPR006083"
+ /translation="MAARNMLMSIKEQSLMTPYLEFDRSQWAALRDSVPMTLTEDEIA
+ QLKGINEDLSLEEVAEIYLPLSRLLNFYISSNLRRQAVLEQFLGTNGQRIPYIISIAG
+ SVAVGKSTTARVLQALLSRWPEHRRVELITTDGFLHPNQVLKERGLMKKKGFPESYDM
+ HRLVKFVSDLKSGVPNVTAPVYSHLIYDVIPDGDKTVAQPDILILEGLNVLQSGMDYP
+ HDPHHVFVSDFVDFSIYVDAPEELLQTWYINRFLKFRDGAFTDPDSYFHNYAKLSKEE
+ AINTATSLWMEINWLNLKQNILPTRERASLIMTKSANHAVEQVRLRK"
+ misc_feature 3453010..3453948
+ /locus_tag="SARI_03523"
+ /note="pantothenate kinase; Provisional; Region: PRK05439"
+ /db_xref="CDD:235466"
+ misc_feature 3453268..3453942
+ /locus_tag="SARI_03523"
+ /note="Pantothenate kinase (PanK) catalyzes the
+ phosphorylation of pantothenic acid to form
+ 4'-phosphopantothenic, which is the first of five
+ steps in coenzyme A (CoA) biosynthetic pathway. The
+ reaction carried out by this enzyme is a key regulatory
+ point...; Region: PanK; cd02025"
+ /db_xref="CDD:238983"
+ misc_feature order(3453292..3453294,3453301..3453312,3453715..3453717,
+ 3453727..3453729,3453907..3453909,3453919..3453921)
+ /locus_tag="SARI_03523"
+ /note="ATP-binding site [chemical binding]; other site"
+ /db_xref="CDD:238983"
+ misc_feature order(3453301..3453306,3453316..3453318,3453529..3453531,
+ 3453727..3453729,3453739..3453741,3453919..3453921)
+ /locus_tag="SARI_03523"
+ /note="CoA-binding site [chemical binding]; other site"
+ /db_xref="CDD:238983"
+ misc_feature order(3453304..3453306,3453595..3453597)
+ /locus_tag="SARI_03523"
+ /note="Mg2+-binding site [ion binding]; other site"
+ /db_xref="CDD:238983"
+ unsure 3453599..3453677
+ /locus_tag="SARI_03523"
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(3453985..3454947)
+ /locus_tag="SARI_03524"
+ CDS complement(3453985..3454947)
+ /locus_tag="SARI_03524"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR003142"
+ /inference="protein motif:HMMPfam:IPR004143"
+ /inference="protein motif:HMMPfam:IPR013196"
+ /inference="protein motif:HMMTigr:IPR004408"
+ /inference="protein motif:HMMTigr:IPR004409"
+ /inference="protein motif:superfamily:IPR008988"
+ /inference="similar to AA sequence:INSD:AAV79733.1"
+ /note="'catalyzes the formation of biotinyl-5'-AMP, also
+ acts as a transcriptional repressor of the biotin operon'"
+ /codon_start=1
+ /transl_table=11
+ /product="biotin--protein ligase"
+ /protein_id="YP_001572487.1"
+ /db_xref="GI:161505375"
+ /db_xref="InterPro:IPR003142"
+ /db_xref="InterPro:IPR004143"
+ /db_xref="InterPro:IPR004408"
+ /db_xref="InterPro:IPR004409"
+ /db_xref="InterPro:IPR008988"
+ /db_xref="InterPro:IPR011991"
+ /db_xref="InterPro:IPR013196"
+ /translation="MKDTTVPLTLISLLADGEFHSGEQLGERLGMSRAAINKHIQTLR
+ DWGVDVFTVPGKGYSLPEPIQLLDADRIHSQLDSGNVAVLPVIDSTNQYLLDRIGELR
+ SGDACVAEYQQAGRGRRGRKWFSPFGANLYLSMYWRLEQGPAAAIGLSLVIGIVMAEV
+ LRELGADKVRVKWPNDLYLLDRKLAGILVELTGKTGDAAQIVIGAGINMAMRRVEEGV
+ INQGWITLQEAGITLDRNTLTAKLIYELRIALELFEQEGLSPYLTRWEKLDNFIHRPV
+ KLIIGDKEIFGISRGIDTQGALLLEQDGVIKPWMGGEISLRSAE"
+ misc_feature complement(3454711..3454947)
+ /locus_tag="SARI_03524"
+ /note="Biotin operon repressor [Transcription]; Region:
+ BirA; COG1654"
+ /db_xref="CDD:224568"
+ misc_feature complement(3453988..3454944)
+ /locus_tag="SARI_03524"
+ /note="bifunctional biotin--[acetyl-CoA-carboxylase]
+ synthetase/biotin operon repressor; Provisional; Region:
+ PRK11886"
+ /db_xref="CDD:237010"
+ misc_feature complement(3454324..3454701)
+ /locus_tag="SARI_03524"
+ /note="Biotin/lipoate A/B protein ligase family; Region:
+ BPL_LplA_LipB; pfam03099"
+ /db_xref="CDD:217367"
+ misc_feature complement(3453997..3454137)
+ /locus_tag="SARI_03524"
+ /note="Biotin protein ligase C terminal domain; Region:
+ BPL_C; pfam02237"
+ /db_xref="CDD:216943"
+ gene complement(3454944..3455972)
+ /gene="murB"
+ /locus_tag="SARI_03525"
+ CDS complement(3454944..3455972)
+ /gene="murB"
+ /locus_tag="SARI_03525"
+ /inference="protein motif:HMMPfam:IPR006094"
+ /inference="protein motif:HMMPfam:IPR011601"
+ /inference="protein motif:HMMTigr:IPR003170"
+ /inference="similar to AA sequence:REFSEQ:NP_463011.1"
+ /note="catalyzes the reduction of UDP-N-acetylglucosamine
+ enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan
+ biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="UDP-N-acetylenolpyruvoylglucosamine reductase"
+ /protein_id="YP_001572488.1"
+ /db_xref="GI:161505376"
+ /db_xref="InterPro:IPR003170"
+ /db_xref="InterPro:IPR006094"
+ /db_xref="InterPro:IPR011601"
+ /translation="MTHSLKPWNTFGIDHCAKHIVCAENEQQLLSAWQQATREGLPVM
+ ILGEGSNVLFLENYAGTVILNRLKGIEVKETAEAWHLYVGAGENWHQLVRYALDNNMP
+ GLENLALIPGCVGSSPIQNIGAYGVELQRVCDYVDCIELETGKRLRLSAAECRFGYRD
+ SIFKHEYQDRVAIVAVGLRLSKQWQPVLTYGDLTCLDPKTVTAQQVFDAVCHMRTTKL
+ PDPKVNGNAGSFFKNPVVAADIAMELLERFPNAPHYPQADGSVKLAAGWLIDQCQLKG
+ VTIGGAAVHRQQALVLINANNATSKDVVALAQHVRQKVGEKFNVWLEPEVRFIGQSGE
+ VNAVESIA"
+ misc_feature complement(3454986..3455972)
+ /gene="murB"
+ /locus_tag="SARI_03525"
+ /note="UDP-N-acetylenolpyruvoylglucosamine reductase;
+ Provisional; Region: murB; PRK00046"
+ /db_xref="CDD:234593"
+ misc_feature complement(3455523..3455924)
+ /gene="murB"
+ /locus_tag="SARI_03525"
+ /note="FAD binding domain; Region: FAD_binding_4;
+ pfam01565"
+ /db_xref="CDD:216574"
+ misc_feature complement(3454983..3455363)
+ /gene="murB"
+ /locus_tag="SARI_03525"
+ /note="UDP-N-acetylenolpyruvoylglucosamine reductase,
+ C-terminal domain; Region: MurB_C; pfam02873"
+ /db_xref="CDD:111727"
+ gene complement(3456131..3456246)
+ /locus_tag="SARI_03526"
+ rRNA complement(3456131..3456246)
+ /locus_tag="SARI_03526"
+ /product="5S ribosomal RNA"
+ /inference="nucleotide motif:Rfam:RF00001"
+ /note="Rfam score 83.22"
+ gene complement(3456435..3459341)
+ /locus_tag="SARI_03527"
+ rRNA complement(3456435..3459341)
+ /locus_tag="SARI_03527"
+ /product="23S ribosomal RNA"
+ /note="Gene model created based on homology with SPA4016"
+ gene complement(3459518..3459590)
+ /locus_tag="SARI_03529"
+ tRNA complement(3459518..3459590)
+ /locus_tag="SARI_03529"
+ /product="tRNA-Ala"
+ gene complement(3459703..3459776)
+ /locus_tag="SARI_03530"
+ tRNA complement(3459703..3459776)
+ /locus_tag="SARI_03530"
+ /product="tRNA-Ile"
+ gene complement(3459842..3461388)
+ /locus_tag="SARI_r002"
+ rRNA complement(3459842..3461388)
+ /locus_tag="SARI_r002"
+ /product="16S ribosomal RNA"
+ /inference="nucleotide motif:Rfam:RF00177"
+ /note="Rfam score 355.13;
+ 5 domain"
+ gene complement(3461764..3462546)
+ /locus_tag="SARI_03532"
+ CDS complement(3461764..3462546)
+ /locus_tag="SARI_03532"
+ /inference="protein motif:HMMPfam:IPR001920"
+ /inference="protein motif:HMMTigr:IPR004391"
+ /inference="protein motif:ScanRegExp:IPR001920"
+ /inference="protein motif:superfamily:IPR001920"
+ /inference="similar to AA sequence:INSD:AAV79731.1"
+ /note="'converts L-glutamate to D-glutamate, a component
+ of peptidoglycan'"
+ /codon_start=1
+ /transl_table=11
+ /product="glutamate racemase"
+ /protein_id="YP_001572490.1"
+ /db_xref="GI:161505378"
+ /db_xref="InterPro:IPR001920"
+ /db_xref="InterPro:IPR004391"
+ /translation="MLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETF
+ IVERVVEIVTAVQQRYPLSLAVIACNTASTVSLPALREKFAFPVVGVVPAIKPAARLT
+ ANGVVGLLATRATVKRPYTHELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEEL
+ RRILRPWLRMPEPPDTVVLGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLLEH
+ EAPDAKSTDANIAYCMAMTPGAEQLLPVLQRYGFETLEKLAV"
+ misc_feature complement(3461773..3462543)
+ /locus_tag="SARI_03532"
+ /note="glutamate racemase; Provisional; Region: PRK00865"
+ /db_xref="CDD:234851"
+ gene complement(3462560..3464404)
+ /gene="btuB"
+ /locus_tag="SARI_03533"
+ CDS complement(3462560..3464404)
+ /gene="btuB"
+ /locus_tag="SARI_03533"
+ /inference="protein motif:HMMPfam:IPR000531"
+ /inference="protein motif:HMMPfam:IPR012910"
+ /inference="protein motif:HMMTigr:IPR010101"
+ /inference="protein motif:ScanRegExp:IPR010916"
+ /note="involved in the active translocation of vitamin B12
+ (cyanocobalamin) across the outer membrane to the
+ periplasmic space"
+ /codon_start=1
+ /transl_table=11
+ /product="vitamin B12/cobalamin outer membrane
+ transporter"
+ /protein_id="YP_001572491.1"
+ /db_xref="GI:161505379"
+ /db_xref="InterPro:IPR000531"
+ /db_xref="InterPro:IPR010101"
+ /db_xref="InterPro:IPR010916"
+ /db_xref="InterPro:IPR012910"
+ /translation="MIKKATLLTAFSVTAFSAWAQDTSPDTLVVTANRFQQPRSAVLA
+ PVTIVTRQDIERWQSTSVNDVLRRLPGVDIAQSGGAGQNSSIFIRGTNSSHVLVLIDG
+ VRLNLAGVSGSADLSQFPVSLVQRIEYIRGPRSAIYGSDAIGGVVNIITTRDNPGTEL
+ TAGWGSNSYQNYDISTQQQLGENTRATVIGDYKYTKGFDVVAKGGTGMQAQPDRDGFL
+ SKTLYGALEHTFSDRWSGFVRGYGYDNRTDYDAYYSPGSPLIDTRKLYSQSWDAGLRF
+ NGERIQSQLVSSYSHSKDYNYDPHYGRYDTSATLDEMKQYNVQWTNSVVVGHGNVGAG
+ VDWQKQTTTPGTGYVPEGYDQRNTGVYLTGLQQLGDFTLEAAARSDDNSQFGRHGTWQ
+ TSAGWEFIEGYRFIASYGTSYKAPNLGQLYGYYGNPNLNPEKSKQWEGAFEGLTAGVS
+ WRISGYRNDINDMIDYDDHLQKYYNEGKARIKGIEATANFDTGPLTHTVSYDYVDARN
+ AITDTPLPRRSKQMAKYQLDWDVYDFDWGVTYQYLGSRYDSDYSAYPYRTVKMGGVSL
+ WDLTVAYPVTSHLTVRGKIANLFDKDYETVYGYQTAGREYTLSGSYTF"
+ misc_feature complement(3462563..3464404)
+ /gene="btuB"
+ /locus_tag="SARI_03533"
+ /note="vitamin B12/cobalamin outer membrane transporter;
+ Provisional; Region: btuB; PRK10641"
+ /db_xref="CDD:236730"
+ misc_feature complement(3462563..3464272)
+ /gene="btuB"
+ /locus_tag="SARI_03533"
+ /note="TonB dependent/Ligand-Gated channels are created by
+ a monomeric 22 strand (22,24) anti-parallel beta-barrel.
+ Ligands apparently bind to the large extracellular loops.
+ The N-terminal 150-200 residues form a plug from the
+ periplasmic end of barrel; Region: ligand_gated_channel;
+ cd01347"
+ /db_xref="CDD:238657"
+ misc_feature complement(order(3463952..3463978,3464012..3464044,
+ 3464090..3464113,3464132..3464149,3464186..3464215,
+ 3464243..3464272))
+ /gene="btuB"
+ /locus_tag="SARI_03533"
+ /note="N-terminal plug; other site"
+ /db_xref="CDD:238657"
+ misc_feature complement(order(3463451..3463453,3463523..3463525))
+ /gene="btuB"
+ /locus_tag="SARI_03533"
+ /note="ligand-binding site [chemical binding]; other site"
+ /db_xref="CDD:238657"
+ misc_feature complement(3464469..3464662)
+ /inference="nucleotide motif:Rfam:RF00174"
+ /note="cobalamin riboswitch"
+ gene 3464777..3465877
+ /locus_tag="SARI_03534"
+ CDS 3464777..3465877
+ /locus_tag="SARI_03534"
+ /inference="protein motif:HMMPfam:IPR010280"
+ /inference="protein motif:HMMTigr:IPR011869"
+ /inference="protein motif:ScanRegExp:IPR010280"
+ /inference="similar to AA sequence:REFSEQ:NP_463008.1"
+ /note="catalyzes the formation of 5-methyl-uridine at
+ position 54 in all tRNAs"
+ /codon_start=1
+ /transl_table=11
+ /product="tRNA (uracil-5-)-methyltransferase"
+ /protein_id="YP_001572492.1"
+ /db_xref="GI:161505380"
+ /db_xref="InterPro:IPR010280"
+ /db_xref="InterPro:IPR011869"
+ /translation="MTPEHLPTEQYDAQLAEKVARLQSMMAPFSGLVPEVFRSPASHY
+ RMRAEFRLWHDGDDLYHIMFDQQTKSRIRVDSFPAASQLINTLMKAMIAGVRDNHALR
+ HKLFQIDYLTTLSNQAVVSLLYHKKLDEEWREAATALRDALRAQGLNVHLIGRATKTK
+ IELDQDYIDERLPVAGKEMIYRQVENSFTQPNAAMNIQMLEWALEVTKDSKGDLLELY
+ CGNGNFSLALARNFNRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNG
+ VREFNRLQGIDLKRYQCETIFVDPPRSGLDSETEKMVQAYPRILYISCNPETLCKNLE
+ TLSQTHTVSRLALFDQFPYTHHMECGVLLTAK"
+ misc_feature 3464777..3465874
+ /locus_tag="SARI_03534"
+ /note="tRNA (uracil-5-)-methyltransferase; Validated;
+ Region: PRK05031"
+ /db_xref="CDD:235332"
+ misc_feature <3464966..3465217
+ /locus_tag="SARI_03534"
+ /note="Protein of unknown function (DUF3164); Region:
+ DUF3164; pfam11363"
+ /db_xref="CDD:151804"
+ misc_feature 3465413..>3465586
+ /locus_tag="SARI_03534"
+ /note="S-adenosylmethionine-dependent methyltransferases
+ (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
+ that use S-adenosyl-L-methionine (SAM or AdoMet) as a
+ substrate for methyltransfer, creating the product
+ S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
+ cd02440"
+ /db_xref="CDD:100107"
+ misc_feature order(3465425..3465445,3465491..3465496,3465569..3465577)
+ /locus_tag="SARI_03534"
+ /note="S-adenosylmethionine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:100107"
+ unsure 3465534..3465849
+ /locus_tag="SARI_03534"
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(3465955..3466314)
+ /locus_tag="SARI_03535"
+ CDS complement(3465955..3466314)
+ /locus_tag="SARI_03535"
+ /inference="protein motif:HMMPfam:IPR009867"
+ /inference="similar to AA sequence:INSD:AAL22966.1"
+ /note="'COG: NOG10261 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572493.1"
+ /db_xref="GI:161505381"
+ /db_xref="InterPro:IPR009867"
+ /translation="MKQSGQDKGTLLLALIAGLSINGTFAALFSAIVPFSVFPIISLV
+ LTIYCLHQRYQNRTMPVGLPGLAAACFILGVLLYSTVVRAEYPDIGSNFFPAVLSVIL
+ VFWISLKMRNRKQEMAE"
+ misc_feature complement(3465958..3466314)
+ /locus_tag="SARI_03535"
+ /note="hypothetical protein; Provisional; Region:
+ PRK11056"
+ /db_xref="CDD:236832"
+ gene complement(3466330..3466962)
+ /locus_tag="SARI_03536"
+ CDS complement(3466330..3466962)
+ /locus_tag="SARI_03536"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR001647"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:INSD:AAX67922.1"
+ /note="'negatively controls the expression of fabA and
+ fabB, genes involved in the unsaturated fatty acid
+ biosynthesis'"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional repressor FabR"
+ /protein_id="YP_001572494.1"
+ /db_xref="GI:161505382"
+ /db_xref="InterPro:IPR001647"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /translation="MGVRAQQKEKTRRSLVEAAFSQLSAERSFASLSLREVAREAGIA
+ PTSFYRHFRDVDELGLTMVDESGLMLRQLMRQARQRIAKGGSVIRTSVSTFMEFIGNN
+ PNAFRLLLRERSGTSAAFRAAVAREIQHFIAELADYLELENHMPRAFTEAQAEAMVTI
+ VFSAGAEALDVGAEQRRQLEERLVLQLRMIAKGAYYWYRREQEKIAHHSE"
+ misc_feature complement(3466363..3466962)
+ /locus_tag="SARI_03536"
+ /note="DNA-binding transcriptional repressor FabR;
+ Provisional; Region: PRK11202"
+ /db_xref="CDD:236881"
+ misc_feature complement(3466789..3466920)
+ /locus_tag="SARI_03536"
+ /note="Bacterial regulatory proteins, tetR family; Region:
+ TetR_N; pfam00440"
+ /db_xref="CDD:201228"
+ gene complement(3467203..3467643)
+ /locus_tag="SARI_03537"
+ CDS complement(3467203..3467643)
+ /locus_tag="SARI_03537"
+ /inference="protein motif:ScanRegExp:IPR013838"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572495.1"
+ /db_xref="GI:161505383"
+ /db_xref="InterPro:IPR013838"
+ /translation="MREIHIIRMVRTRTTSNDKFFCCQVFNCAVMAFQRQGMFVNKMG
+ VALQDFTVVTLIKPLTHTGLLINHIIGMVEDVGERRTKETGMVAIKRVLIKFDNTADG
+ VAQGFGWDGAPVGTSAANVMITLNHRDVCSKLDQTHCSTFTARA"
+ gene 3467755..3468564
+ /locus_tag="SARI_03538"
+ CDS 3467755..3468564
+ /locus_tag="SARI_03538"
+ /inference="protein motif:BlastProDom:IPR001327"
+ /inference="protein motif:FPrintScan:IPR001100"
+ /inference="protein motif:Gene3D:IPR004099"
+ /inference="protein motif:HMMPfam:IPR001327"
+ /inference="protein motif:HMMPfam:IPR004099"
+ /inference="protein motif:HMMPfam:IPR013027"
+ /inference="similar to AA sequence:SwissProt:Q5PK71"
+ /note="'KEGG: sec:SC4015 3.7e-141 udhA; soluble pyridine
+ nucleotide transhydrogenase K00322;
+ COG: COG1249 Pyruvate/2-oxoglutarate dehydrogenase
+ complex, dihydrolipoamide dehydrogenase (E3) component,
+ and related enzymes;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572496.1"
+ /db_xref="GI:161505384"
+ /db_xref="InterPro:IPR001100"
+ /db_xref="InterPro:IPR001327"
+ /db_xref="InterPro:IPR004099"
+ /db_xref="InterPro:IPR013027"
+ /translation="MDVKVDLINTRDRLLAFLDQEMSDSLSYHFWNSGVVIRHNEEYE
+ KIEGCDDGVIMHLKSGKKLKADCLLYANGRTGNTDSLALENIGLKTDSRGQLKVNSMY
+ QTALPHVYAVGDVIGYPSLASAAYDQGRIAAQALVKGEATAHLIEDIPTGIYTIPEIS
+ SVGKTEQQLTAMKVPYEVGRAQFKHLARAQIVGMNVGTLKILFHRETKEILGIHCFGE
+ RAAEIIHIGQAIMEQKGGGNTIEYFVNTTFNYPTMAEAYRVAALNGLNRLF"
+ misc_feature <3467761..3467940
+ /locus_tag="SARI_03538"
+ /note="Pyridine nucleotide-disulphide oxidoreductase;
+ Region: Pyr_redox; pfam00070"
+ /db_xref="CDD:215691"
+ misc_feature 3468199..3468537
+ /locus_tag="SARI_03538"
+ /note="Pyridine nucleotide-disulphide oxidoreductase,
+ dimerisation domain; Region: Pyr_redox_dim; pfam02852"
+ /db_xref="CDD:217252"
+ gene complement(3468547..3469464)
+ /locus_tag="SARI_03539"
+ CDS complement(3468547..3469464)
+ /locus_tag="SARI_03539"
+ /inference="protein motif:FPrintScan:IPR000847"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="protein motif:HMMPfam:IPR005119"
+ /inference="similar to AA sequence:REFSEQ:YP_153037.1"
+ /note="'Activates the expression of a regulon of hydrogen
+ peroxide-inducible genes such as katG, gor, ahpC, ahpF,
+ oxyS, dps, fur and grxA'"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional regulator OxyR"
+ /protein_id="YP_001572497.1"
+ /db_xref="GI:161505385"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR005119"
+ /db_xref="InterPro:IPR011991"
+ /translation="MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELG
+ VMLLERTSRKVLFTQAGLLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVG
+ PYLLPLIIPMLHQTFPKLEMYLHEAQTHQLLAQLDSGKLDCAILALVKESEAFIEVPL
+ FDEPMMLAIYEDHPWAKRDRVPMSDLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTH
+ FRATSLETLRNMVAAGSGITLLPALAVPQERKRDGVVYLPCIKPEPRRTVGLVYRPGS
+ PLRGRYEQLAEAIRGAMDGHFDKALKQAV"
+ misc_feature complement(3468550..3469464)
+ /locus_tag="SARI_03539"
+ /note="DNA-binding transcriptional regulator OxyR;
+ Provisional; Region: PRK11151"
+ /db_xref="CDD:182999"
+ misc_feature complement(3469282..3469458)
+ /locus_tag="SARI_03539"
+ /note="Bacterial regulatory helix-turn-helix protein, lysR
+ family; Region: HTH_1; pfam00126"
+ /db_xref="CDD:215735"
+ misc_feature complement(3468598..3469194)
+ /locus_tag="SARI_03539"
+ /note="The C-terminal substrate-binding domain of the
+ LysR-type transcriptional regulator OxyR, a member of the
+ type 2 periplasmic binding fold protein superfamily;
+ Region: PBP2_OxyR; cd08411"
+ /db_xref="CDD:176103"
+ misc_feature complement(order(3468766..3468771,3468775..3468780,
+ 3468787..3468789,3468796..3468801,3468808..3468810,
+ 3469087..3469101,3469123..3469125,3469135..3469137,
+ 3469144..3469149,3469156..3469158))
+ /locus_tag="SARI_03539"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:176103"
+ unsure 3468731..3468757
+ /note="Sequence derived from one plasmid subclone"
+ unsure 3469009..3469018
+ /note="Sequence derived from one plasmid subclone"
+ gene 3469560..3469671
+ /locus_tag="SARI_03540"
+ ncRNA 3469560..3469671
+ /locus_tag="SARI_03540"
+ /ncRNA_class="antisense_RNA"
+ /product="OxyS RNA"
+ /inference="nucleotide motif:Rfam:RF00035"
+ /note="Rfam score 100.8"
+ gene complement(3469814..3471187)
+ /locus_tag="SARI_03541"
+ CDS complement(3469814..3471187)
+ /locus_tag="SARI_03541"
+ /inference="protein motif:HMMPfam:IPR000362"
+ /inference="protein motif:HMMTigr:IPR009049"
+ /inference="protein motif:ScanRegExp:IPR000362"
+ /inference="protein motif:superfamily:IPR008948"
+ /inference="similar to AA sequence:REFSEQ:YP_219000.1"
+ /note="catalyzes the formation of arginine from
+ (N-L-arginino)succinate"
+ /codon_start=1
+ /transl_table=11
+ /product="argininosuccinate lyase"
+ /protein_id="YP_001572498.1"
+ /db_xref="GI:161505386"
+ /db_xref="InterPro:IPR000362"
+ /db_xref="InterPro:IPR008948"
+ /db_xref="InterPro:IPR009049"
+ /translation="MALWGGRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKAL
+ VTVGVLTADEQRQLEDALNVLLEEVRANPQQILQSDAEDIHSWVEGKLIDKVGQLGKK
+ LHTGRSRNDQVATDLKLWCKETVRELLTANRQLQSALVETAQANQDAVMPGYTHLQRA
+ QPVTFAHWCLAYVEMLARDESRLQDTLKRLDVSPLGCGALAGTAYEIDREQLAGWLGF
+ TSATRNSLDSVSDRDHVLELLSDAAIGMVHLSRFAEDLIFFNSGEAGFVELSDRVTSG
+ SSLMPQKKNPDALELIRGKCGRVQGALTGMMMTLKGLPLAYNKDMQEDKEGVFDALDT
+ WLDCLHMAALVLDGIQVKRSRCQDAAQQGYANATELADYLVAKGVPFREAHHIVGEAV
+ VEAIRQGKPLEALSLADLQKFSLVISEDVYPILSLQSCLDKRAAKGGVSPQQVAQAID
+ YAKARLA"
+ misc_feature complement(3469823..3471187)
+ /locus_tag="SARI_03541"
+ /note="argininosuccinate lyase; Provisional; Region:
+ PRK04833"
+ /db_xref="CDD:179883"
+ misc_feature complement(3469820..3471124)
+ /locus_tag="SARI_03541"
+ /note="Argininosuccinate lyase (argininosuccinase, ASAL);
+ Region: Argininosuccinate_lyase; cd01359"
+ /db_xref="CDD:176463"
+ misc_feature complement(order(3470213..3470218,3470222..3470224,
+ 3470231..3470233,3470237..3470239,3470318..3470320,
+ 3470327..3470329,3470333..3470335,3470357..3470359,
+ 3470363..3470365,3470492..3470494,3470720..3470725,
+ 3470849..3470851,3470858..3470866,3470933..3470935,
+ 3470939..3470941,3471110..3471112,3471122..3471124))
+ /locus_tag="SARI_03541"
+ /note="active sites [active]"
+ /db_xref="CDD:176463"
+ misc_feature complement(order(3469844..3469846,3469868..3469882,
+ 3469886..3469888,3470024..3470026,3470033..3470035,
+ 3470042..3470047,3470060..3470062,3470072..3470074,
+ 3470087..3470089,3470168..3470170,3470177..3470179,
+ 3470210..3470212,3470219..3470221,3470228..3470239,
+ 3470261..3470269,3470273..3470275,3470282..3470290,
+ 3470294..3470311,3470315..3470320,3470327..3470329,
+ 3470333..3470341,3470345..3470356,3470372..3470374,
+ 3470396..3470398,3470405..3470410,3470423..3470428,
+ 3470435..3470440,3470444..3470449,3470456..3470458,
+ 3470468..3470470,3470477..3470479,3470489..3470491,
+ 3470495..3470500,3470507..3470521,3470561..3470563,
+ 3470570..3470572,3470576..3470590,3470621..3470623,
+ 3470633..3470635,3470642..3470647,3470654..3470656,
+ 3470672..3470677,3470687..3470689,3470705..3470728,
+ 3470873..3470878,3470885..3470887,3470894..3470896))
+ /locus_tag="SARI_03541"
+ /note="tetramer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:176463"
+ gene complement(3471305..3472081)
+ /locus_tag="SARI_03542"
+ CDS complement(3471305..3472081)
+ /locus_tag="SARI_03542"
+ /inference="protein motif:Gene3D:IPR001048"
+ /inference="protein motif:HMMPfam:IPR001048"
+ /inference="protein motif:HMMPIR:IPR011148"
+ /inference="protein motif:HMMTigr:IPR004662"
+ /inference="protein motif:superfamily:IPR001048"
+ /inference="similar to AA sequence:SwissProt:Q5PK74"
+ /note="catalyzes the phosphorylation of
+ N-acetyl-L-glutamate to form N-acetyl-L-glutamate
+ 5-phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="acetylglutamate kinase"
+ /protein_id="YP_001572499.1"
+ /db_xref="GI:161505387"
+ /db_xref="InterPro:IPR001048"
+ /db_xref="InterPro:IPR004662"
+ /db_xref="InterPro:IPR011148"
+ /translation="MMNPLIIKLGGVLLDNEEALERLFTALVNYRESHQRPLVIVHGG
+ GCVVDELMKGLNLPVKKKNGLRVTPADQIGIIAGALAGTANKTLLAWAKKHHIASVGL
+ FLGDGDSVKVIQLDEALGHVGLAQPGSPKLINTLLENDFLPVVSSIGVTEDGQLMNVN
+ ADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIDQGIITDGMIVKV
+ NAALDAARALGRPVDIASWRHADQLPALFNGTPIGTRILA"
+ misc_feature complement(3471314..3472069)
+ /locus_tag="SARI_03542"
+ /note="AAK_NAGK-NC: N-Acetyl-L-glutamate kinase -
+ noncyclic (NAGK-NC) catalyzes the phosphorylation of the
+ gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in
+ the second step of microbial arginine biosynthesis using
+ the acetylated, noncyclic route of...; Region:
+ AAK_NAGK-NC; cd04249"
+ /db_xref="CDD:239782"
+ misc_feature complement(order(3471431..3471433,3471449..3471451,
+ 3471455..3471457,3471524..3471526,3471542..3471544,
+ 3471947..3471952,3472049..3472054,3472058..3472060))
+ /locus_tag="SARI_03542"
+ /note="nucleotide binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:239782"
+ misc_feature complement(order(3471599..3471601,3471605..3471610,
+ 3471884..3471886,3471947..3471952))
+ /locus_tag="SARI_03542"
+ /note="N-acetyl-L-glutamate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:239782"
+ gene complement(3472089..3473093)
+ /gene="argC"
+ /locus_tag="SARI_03543"
+ CDS complement(3472089..3473093)
+ /gene="argC"
+ /locus_tag="SARI_03543"
+ /inference="protein motif:BlastProDom:IPR000706"
+ /inference="protein motif:HMMPfam:IPR000534"
+ /inference="protein motif:HMMPfam:IPR012280"
+ /inference="protein motif:HMMPIR:IPR011137"
+ /inference="protein motif:HMMTigr:IPR000706"
+ /inference="protein motif:ScanRegExp:IPR000706"
+ /inference="protein motif:ScanRegExp:IPR006025"
+ /inference="similar to AA sequence:SwissProt:Q8Z309"
+ /note="'catalyzes the reduction of N-acetyl-5-glutamyl
+ phosphate to N-acetyl-L-glutamate 5-semialdehyde in
+ arginine biosynthesis and the reduction of
+ N-acetyl-gamma-aminoadipyl-phosphate to
+ N-acetyl-L-aminoadipate-semialdehyde in lysine
+ biosynthesis; involved in both the arginine and lysine
+ biosynthetic pathways; lysine is produced via the AAA
+ pathway, lysine from alpha-aminoadipate'"
+ /codon_start=1
+ /transl_table=11
+ /product="N-acetyl-gamma-glutamyl-phosphate reductase"
+ /protein_id="YP_001572500.1"
+ /db_xref="GI:161505388"
+ /db_xref="InterPro:IPR000534"
+ /db_xref="InterPro:IPR000706"
+ /db_xref="InterPro:IPR006025"
+ /db_xref="InterPro:IPR011137"
+ /db_xref="InterPro:IPR012280"
+ /translation="MLNTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKL
+ ISDLHPQLKGIVDLPLQPMSDVRDFSADVDVVFLATAHEVSHDLAPQFLQAGCVVFDL
+ SGAFRVNDRAFYEKYYGFTHQYPELLEQAVYGLAEWNADKLNAANLIAVPGCYPTAAQ
+ LSLKPLIDGGLLDLTQWPVINATSGVSGAGRKAAISNSFCEVSLQPYGVFTHRHQPEI
+ AAHLGAEVIFTPHLGNFPRGILETITCRLKAGVTHAQVADVLQKAYGDKPLVRLYDKG
+ VPALKNVVGLPFCDIGFAVQGEHLIVVATEDNLLKGAAAQAVQCANIRFGFAETQSLI
+ "
+ misc_feature complement(3472095..3473093)
+ /gene="argC"
+ /locus_tag="SARI_03543"
+ /note="N-acetyl-gamma-glutamyl-phosphate reductase;
+ Validated; Region: argC; PRK00436"
+ /db_xref="CDD:234761"
+ misc_feature complement(3472656..3473078)
+ /gene="argC"
+ /locus_tag="SARI_03543"
+ /note="Semialdehyde dehydrogenase, NAD binding domain;
+ Region: Semialdhyde_dh; smart00859"
+ /db_xref="CDD:214863"
+ unsure 3472889..3473176
+ /note="Sequence derived from one plasmid subclone"
+ gene 3473182..3474333
+ /locus_tag="SARI_03544"
+ CDS 3473182..3474333
+ /locus_tag="SARI_03544"
+ /inference="protein motif:HMMPfam:IPR002933"
+ /inference="protein motif:HMMPfam:IPR011650"
+ /inference="protein motif:HMMTigr:IPR010169"
+ /inference="protein motif:ScanRegExp:IPR001261"
+ /inference="similar to AA sequence:INSD:AAX67916.1"
+ /note="catalyzes the formation of L-ornithine from
+ N(2)-acetyl-L-ornithine in arginine biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="acetylornithine deacetylase"
+ /protein_id="YP_001572501.1"
+ /db_xref="GI:161505389"
+ /db_xref="InterPro:IPR001261"
+ /db_xref="InterPro:IPR002933"
+ /db_xref="InterPro:IPR010169"
+ /db_xref="InterPro:IPR011650"
+ /translation="MKNVLPPFIEIYRALIATPSISATEASLDQSNASLITLLAGWFS
+ DLGFNVEVQPVPGTRNKFNMLASSGHGAGGLLLAGHTDTVPFDDGRWTRDPFTLTEHD
+ NKLYGLGTADMKGFFAFILDALRAVDVTQLKKPLYILATADEETSMAGARYFSETTAL
+ RPDCAIIGEPTSLQPIRAHKGHISNVVRVLGQSGHSSDPARGVNAIELMHDAIGHIMQ
+ LRDSLKARYHYEAFTVPYPTLNLGHIHGGDASNRICACCELHMDIRPLPGMTLNDLNG
+ LLNDALAPVSERWPGRLTVAELHPPIPGYECPPDHQLVEVVEKLLGTKTDVVNYCTEA
+ PFMQTLCPTLVLGPGSINQAHQPDEYLETRFIKPTRELITQVVHHFCWH"
+ misc_feature 3473194..3474330
+ /locus_tag="SARI_03544"
+ /note="acetylornithine deacetylase; Provisional; Region:
+ PRK05111"
+ /db_xref="CDD:235346"
+ misc_feature 3473209..3474312
+ /locus_tag="SARI_03544"
+ /note="M20 Peptidase acetylornithine deacetylase; Region:
+ M20_ArgE; cd03894"
+ /db_xref="CDD:193514"
+ misc_feature order(3473515..3473517,3473611..3473616,3473686..3473688)
+ /locus_tag="SARI_03544"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:193514"
+ misc_feature order(3473731..3473733,3473764..3473775,3473791..3473793,
+ 3473797..3473802,3473809..3473814,3473818..3473823,
+ 3473830..3473832,3473893..3473895,3473899..3473922,
+ 3473938..3473943,3473965..3473967,3473971..3473973,
+ 3474166..3474168)
+ /locus_tag="SARI_03544"
+ /note="putative dimer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:193514"
+ unsure 3473402..3473477
+ /locus_tag="SARI_03544"
+ /note="Sequence derived from one plasmid subclone"
+ gene 3474701..3477352
+ /locus_tag="SARI_03545"
+ CDS 3474701..3477352
+ /locus_tag="SARI_03545"
+ /inference="protein motif:HMMPfam:IPR001449"
+ /inference="protein motif:ScanRegExp:IPR001449"
+ /note="catalyzes the formation of oxaloacetate from
+ phosphoenolpyruvate"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphoenolpyruvate carboxylase"
+ /protein_id="YP_001572502.1"
+ /db_xref="GI:161505390"
+ /db_xref="InterPro:IPR001449"
+ /translation="MNEQYSALRSNVSMLGKVLGETIKDALGEHILDRVETIRKLSKS
+ SRAGNEANRQELLTTLQNLSNDELLPVARAFSQFLNLANTAEQYHSISPKGEAASNPE
+ VIARTLRKLKNQPDLNDATIKKAVESLSLELVLTAHPTEITRRTLIHKMGEINNCLKQ
+ LDNTDIADYERHQVMRRLRQLIAQSWHTDEIRKQRPSPVDEAKWGFAVVENSLWQGVP
+ NYLRELNEQLEENLGYKLPVDFVPVRFTSWMGGDRDGNPNVTADITRHVLLLSRWKAT
+ DLFLKDIHVLVSELSMVEATPELLALVGEEGASEPYRYLMKKLRARLMATQSWLEARL
+ KGEKLPKPDGLLTQNEQLWEPLYACYQSLQACGMGIIANGELLDTLRRVKCFGVPLVR
+ IDIRQESTRHTEALGEITRYLGIGDYESWSEADKQAFLIRELNSKRPLLPRNWEPSND
+ TREVLETCKVIAEAPKGSIAAYVISMAKTPSDVLAVHLLLKEAGIGFAMPVAPLFETL
+ DDLNNADDVMTQLLNIDWYRGLIQGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIK
+ TCEKAGIELTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKYGLP
+ EVTVSSLSLYTSAILEANLLPPPEPKDSWRHIMDELSVISCETYRGYVRENKDFVPYF
+ RSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLGAGTALQK
+ VVEDGKQSELEAMCRDWPFFSTRLGMLEMVFSKADLWLADYYDQRLVAKTLWPLGKEL
+ RDLLEEDIKVVLAIANDSHLMADLPWIAESIQLRNVYTDPLNVLQAELLYRSRLTEEQ
+ GKSPDPRVEQALMVTIAGVAAGMRNTG"
+ misc_feature 3474701..3477349
+ /locus_tag="SARI_03545"
+ /note="phosphoenolpyruvate carboxylase; Reviewed; Region:
+ PRK00009"
+ /db_xref="CDD:234570"
+ misc_feature 3474704..3477349
+ /locus_tag="SARI_03545"
+ /note="Phosphoenolpyruvate carboxylase [Energy production
+ and conversion]; Region: Ppc; COG2352"
+ /db_xref="CDD:225227"
+ gene 3477563..3479296
+ /locus_tag="SARI_03546"
+ CDS 3477563..3479296
+ /locus_tag="SARI_03546"
+ /inference="protein motif:HMMPfam:IPR000917"
+ /note="'KEGG: pha:PSHAa2772 6.8e-21 eptA; lipid A
+ phosphoethanolamine transferase, associated with polymyxin
+ resistance K03760;
+ COG: COG2194 Predicted membrane-associated,
+ metal-dependent hydrolase;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572503.1"
+ /db_xref="GI:161505391"
+ /db_xref="InterPro:IPR000917"
+ /translation="MQSTLLQAKPAFSWKALGWALLYFWFFSTLLQAIIYFTGYSGTN
+ GLRDSLLYSSLWLIPVFLFPGRTRVIAAVIGVVLWAASLAALSYYVIYGQEFSQSVLF
+ VMFETNANEASEYLSQYFSLKIVLVALAYTVAAILLWTRLRPVYIPSPWRYLVSFALL
+ YGLILHPIAMNTLIKHKSMEKTLDSLASRMEPAAPWQFITGYYQYRLQLASLNKLLNE
+ NGALPPLANFKDNSGDAPRTLVLVIGESTQRGRMSLYGYPRETTPELDALHKTDPGLT
+ VFNNVVTSRPYTIEILQQALTFADEKNPDWYLTKPSLMNMMKQAGYKTFWITNQQTMT
+ ARNTMLTVFSKQTDKQFYMNQQRTQSAREYDSNVLAPFKAVLADPAPKKFIIVHLLGT
+ HIKYKFRYPENQGKFDGKTDHVPPGLSSDELESYNDYDNANLYNDYVVASLIKDYKAT
+ DPNGFLLYFSDHGEEVYDTPPHKTQGRNEDSPTRHMYTVPFLLWTSEKWQAAHPRDFS
+ QDVDRKYSSSELIHTWSDLAGLTYDGYDPTRSITNPQFKETTRWIGNPYKKNALIDYD
+ TLPYGDQVGNQ"
+ misc_feature 3477563..3479293
+ /locus_tag="SARI_03546"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10649"
+ /db_xref="CDD:182617"
+ misc_feature 3478271..3479155
+ /locus_tag="SARI_03546"
+ /note="Sulfatase; Region: Sulfatase; pfam00884"
+ /db_xref="CDD:216172"
+ gene 3479457..3480293
+ /locus_tag="SARI_03547"
+ CDS 3479457..3480293
+ /locus_tag="SARI_03547"
+ /inference="protein motif:FPrintScan:IPR000005"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR000005"
+ /inference="protein motif:HMMSmart:IPR000005"
+ /inference="protein motif:ScanRegExp:IPR000005"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="protein motif:superfamily:IPR010993"
+ /inference="similar to AA sequence:REFSEQ:YP_218994.1"
+ /note="'KEGG: bli:BL05281 1.7e-11 adaA;
+ methylphosphotriester-DNA alkyltransferase and
+ transcriptional regulator (AraC/XylS family) K00567;
+ COG: COG2207 AraC-type DNA-binding domain-containing
+ proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572504.1"
+ /db_xref="GI:161505392"
+ /db_xref="InterPro:IPR000005"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR010993"
+ /db_xref="InterPro:IPR012287"
+ /translation="MYHDVSHLLSRLINGPLPLRQIYFASASGPAPELAYQVDFPRLE
+ IVLEGELTDMSITASLIPCDVLYVPAGGWNIPQWQTPVTTLSILFGKQQLGFSVVHWD
+ GQQHQNLTKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQ
+ IQTASRSRALFEAIREYIDERYAAPLTRESVAQAFYISPNYLSHLFQKTGAIGFNEYL
+ NHTRLEHAKTLLKGYDLKVKEVAHHCGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLT
+ EK"
+ misc_feature 3480009..3480260
+ /locus_tag="SARI_03547"
+ /note="helix_turn_helix, arabinose operon control protein;
+ Region: HTH_ARAC; smart00342"
+ /db_xref="CDD:197666"
+ misc_feature 3480156..3480263
+ /locus_tag="SARI_03547"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ gene 3480548..3481210
+ /locus_tag="SARI_03548"
+ CDS 3480548..3481210
+ /locus_tag="SARI_03548"
+ /inference="protein motif:Gene3D:IPR013785"
+ /inference="protein motif:HMMPanther:IPR001585"
+ /inference="protein motif:HMMPfam:IPR001585"
+ /inference="protein motif:HMMTigr:IPR004731"
+ /inference="protein motif:ScanRegExp:IPR001585"
+ /inference="similar to AA sequence:INSD:AAV79717.1"
+ /note="similar to transaldolase from Escherichia coli;
+ many organisms have multiple copies"
+ /codon_start=1
+ /transl_table=11
+ /product="fructose-6-phosphate aldolase"
+ /protein_id="YP_001572505.1"
+ /db_xref="GI:161505393"
+ /db_xref="InterPro:IPR001585"
+ /db_xref="InterPro:IPR004731"
+ /db_xref="InterPro:IPR013785"
+ /translation="MELYLDTANVAEVERLARIFPIAGVTTNPSIVAASKESIWDVLP
+ RLQNAIGEEGTLFAQTMSRDAKGMVEEAKRLNNAIPGIVVKIPVTAEGLAAIKQLKKE
+ GIVTLGTAVYSASQGLLAALAGAKYVAPYVNRVDAQGGDGIRMVQELQTLLERHAPDS
+ MVLAASFKTPRQALDCLLAGCQAITLPLDVAQQMLNTPAVESAIEKFEQDWKNAFGNL
+ NL"
+ misc_feature 3480551..3481183
+ /locus_tag="SARI_03548"
+ /note="Transaldolase-like fructose-6-phosphate aldolases
+ (FSA) found in bacteria and archaea; Region:
+ Transaldolase_FSA; cd00956"
+ /db_xref="CDD:188643"
+ misc_feature order(3480563..3480565,3480626..3480631,3480800..3480802,
+ 3480938..3480940,3481040..3481042)
+ /locus_tag="SARI_03548"
+ /note="active site"
+ /db_xref="CDD:188643"
+ misc_feature order(3480596..3480598,3480605..3480607,3480632..3480637,
+ 3480644..3480646,3480662..3480664,3480722..3480724,
+ 3480740..3480742,3480758..3480760,3480818..3480820,
+ 3480824..3480829,3480836..3480838,3480893..3480895,
+ 3480938..3480940,3480944..3480946,3480953..3480955,
+ 3480959..3480961,3481010..3481015,3481052..3481054,
+ 3481058..3481060,3481076..3481081,3481088..3481090,
+ 3481136..3481138,3481142..3481147,3481154..3481156,
+ 3481166..3481171,3481175..3481180)
+ /locus_tag="SARI_03548"
+ /note="intersubunit interactions; other site"
+ /db_xref="CDD:188643"
+ misc_feature 3480800..3480802
+ /locus_tag="SARI_03548"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:188643"
+ gene 3481222..3482325
+ /gene="gldA"
+ /locus_tag="SARI_03549"
+ CDS 3481222..3482325
+ /gene="gldA"
+ /locus_tag="SARI_03549"
+ /inference="protein motif:HMMPfam:IPR001670"
+ /inference="protein motif:ScanRegExp:IPR001670"
+ /inference="protein motif:ScanRegExp:IPR002086"
+ /inference="similar to AA sequence:INSD:AAL22948.1"
+ /note="forms dimers and octamers; involved in conversion
+ of glycerol to dihydroxy-acetone"
+ /codon_start=1
+ /transl_table=11
+ /product="glycerol dehydrogenase"
+ /protein_id="YP_001572506.1"
+ /db_xref="GI:161505394"
+ /db_xref="InterPro:IPR001670"
+ /db_xref="InterPro:IPR002086"
+ /translation="MDRIIQSPGKYIQGANVIARLGDYLKPMANNWLVVGDKFVLGFA
+ EETLRKSLTDAGLSVEIAPFGGECSQNEIDRLRAVAEKSQCGAVLGIGGGKTLDTAKA
+ LAHFMNVPVAIAPTIASTDAPCSALSVIYTDAGEFDRYLLLPHNPNMVIVDTQIVAGA
+ PARLLAAGIGDALATWFEARACSRSGATTMAGGKCTQAALALAELCYNTLIEEGEKAM
+ LAAEQHVVTPALERVIEANTYLSGVGFESGGLAAAHAIHNGLTAIPDAHHYYHGEKVA
+ FGTLTQLVLENAPVEEIETVAALCHSVGLPITLAQLDIKQDIPAKMRTVAEAACAEGE
+ TIHNMPGGVTPDEVYAALLVADQYGQRFLQEWE"
+ misc_feature 3481222..3482304
+ /gene="gldA"
+ /locus_tag="SARI_03549"
+ /note="Glycerol dehydrogenase and related enzymes [Energy
+ production and conversion]; Region: GldA; COG0371"
+ /db_xref="CDD:223448"
+ misc_feature 3481243..3482295
+ /gene="gldA"
+ /locus_tag="SARI_03549"
+ /note="Glycerol dehydrogenases (GlyDH) catalyzes oxidation
+ of glycerol to dihydroxyacetone in glycerol dissmilation;
+ Region: GlyDH; cd08170"
+ /db_xref="CDD:173929"
+ misc_feature order(3481246..3481254,3481258..3481263,3481834..3481836,
+ 3481843..3481845,3481912..3481917,3481924..3481926)
+ /gene="gldA"
+ /locus_tag="SARI_03549"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:173929"
+ misc_feature order(3481330..3481332,3481498..3481506,3481513..3481515,
+ 3481522..3481524,3481567..3481572,3481576..3481578,
+ 3481633..3481638,3481687..3481689,3481711..3481713,
+ 3481732..3481734,3481744..3481746,3481981..3481983,
+ 3481993..3481995,3482032..3482034)
+ /gene="gldA"
+ /locus_tag="SARI_03549"
+ /note="active site"
+ /db_xref="CDD:173929"
+ misc_feature order(3481732..3481734,3481981..3481983,3482032..3482034)
+ /gene="gldA"
+ /locus_tag="SARI_03549"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:173929"
+ gene complement(3482432..3484612)
+ /locus_tag="SARI_03550"
+ CDS complement(3482432..3484612)
+ /locus_tag="SARI_03550"
+ /inference="protein motif:HMMPfam:IPR002016"
+ /inference="protein motif:HMMTigr:IPR000763"
+ /inference="protein motif:ScanRegExp:IPR002016"
+ /inference="protein motif:superfamily:IPR010255"
+ /note="'KEGG: sty:STY3760 0. katG; catalase
+ (hydroperoxidase I) K03782;
+ COG: COG0376 Catalase (peroxidase I);
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572507.1"
+ /db_xref="GI:161505395"
+ /db_xref="InterPro:IPR000763"
+ /db_xref="InterPro:IPR002016"
+ /db_xref="InterPro:IPR010255"
+ /translation="MSTTDDTHNTLSAGKCPFHQGGHDRSAGAGTASRDWWPNQLRVD
+ LLNQHSNRSNPLGEDFDYRKEFSKLDYSALKGDLKALLTDSQPWWPADWGSYVGLFIR
+ MAWHGAGTYRSIDGRGGAGRGQQRFAPLNSWPDNVSLDKARRLLWPIKQKYGQKISWA
+ DLFILAGNVALENSGFRTFGFGAGREDVWEPDLDVNWGDEKAWLTHRHPEALAKAPLG
+ ATEMGLIYVNPEGPDHSGEPLSAAAAIRATFGNMGMNDEETVALIAGGHTLGKTHGAA
+ AASHVGADPEAAPIEAQGLGWASSYGSGVGADAITSGLEVVWTQTPTQWSNYFFENLF
+ KYEWVQTRSPAGAIQFEAVDAPDIIPDPFDPSKKRKPTMLVTDLTLRFDPEFEKISRR
+ FLNDPQAFNEAFARAWFKLTHRDMGPKARYIGPEVPKEDLIWQDPLPQPLYQPTQEDI
+ INLKAAIAASGLSVSEMVSVAWASASTFRGGDKRGGANGARLALAPQRDWDVNAVAAR
+ VLPVLEALQKTTNKASLADIIVLAGVVGIEQAAAAAGVSISVPFAPGRVDARQDQTDI
+ EMFSLLEPIADGFRNYRARLDVSTTESLLIDKAQQLTLTAPEMTVLVGGMRVLGTNFD
+ GSQNGVFTDRPGVLSTDFFANLLDMRYEWKPTDDANELFEGRDRLTGEVKYTATRADL
+ VFGSNSVLRALAEVYACSDAHEKFVKDFVAAWVKVMNLDRFDLL"
+ misc_feature complement(3482438..3484579)
+ /locus_tag="SARI_03550"
+ /note="catalase/hydroperoxidase HPI(I); Provisional;
+ Region: PRK15061"
+ /db_xref="CDD:237891"
+ misc_feature complement(3483317..3484531)
+ /locus_tag="SARI_03550"
+ /note="Heme-dependent peroxidases similar to plant
+ peroxidases; Region: plant_peroxidase_like; cl00196"
+ /db_xref="CDD:241676"
+ misc_feature complement(order(3483389..3483391,3483401..3483403,
+ 3483485..3483487,3483491..3483493,3483791..3483808,
+ 3483812..3483817,3483824..3483829,3483866..3483868,
+ 3483926..3483934,3484298..3484300,3484307..3484312,
+ 3484316..3484321))
+ /locus_tag="SARI_03550"
+ /note="heme binding site [chemical binding]; other site"
+ /db_xref="CDD:173823"
+ misc_feature complement(3482447..3483307)
+ /locus_tag="SARI_03550"
+ /note="C-terminal non-catalytic domain of
+ catalase-peroxidases; Region: catalase_peroxidase_2;
+ cd08200"
+ /db_xref="CDD:173828"
+ gene complement(3484777..3485667)
+ /gene="metF"
+ /locus_tag="SARI_03551"
+ CDS complement(3484777..3485667)
+ /gene="metF"
+ /locus_tag="SARI_03551"
+ /inference="protein motif:HMMPfam:IPR003171"
+ /inference="protein motif:HMMTigr:IPR004620"
+ /inference="similar to AA sequence:REFSEQ:NP_462986.1"
+ /note="'MTHFR; catalyzes NADH-linked reduction of
+ 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate
+ using FAD as a cofactor'"
+ /codon_start=1
+ /transl_table=11
+ /product="5,10-methylenetetrahydrofolate reductase"
+ /protein_id="YP_001572508.1"
+ /db_xref="GI:161505396"
+ /db_xref="InterPro:IPR003171"
+ /db_xref="InterPro:IPR004620"
+ /translation="MSFFHANQREALNQSLAEVQGQINVSFEFFPPRTSEMEQTLWNS
+ IDRLSSLKPKFVSVTYGANSGERDRTHSVIKGIKERTGLEAAPHLTCIDATRDELRTI
+ ARDYWNNGIRHIVALRGDLPPGSGKPEMYAADLVGLLKEVADFDISVAAYPEVHPEAK
+ SAQADLLNLKRKVDAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFK
+ QAKKFADMTNVRIPSWMSLMFEGLDNDAETRKLVGANIAMDMVKILSREGVKDFHFYT
+ LNRAEMSYAICHTLGVRPGL"
+ misc_feature complement(3484798..3485595)
+ /gene="metF"
+ /locus_tag="SARI_03551"
+ /note="Methylenetetrahydrofolate reductase (MTHFR).
+ 5,10-Methylenetetrahydrofolate is reduced to
+ 5-methyltetrahydrofolate by methylenetetrahydrofolate
+ reductase, a cytoplasmic, NAD(P)-dependent enzyme.
+ 5-methyltetrahydrofolate is utilized by methionine
+ synthase...; Region: MTHFR; cd00537"
+ /db_xref="CDD:238299"
+ misc_feature complement(order(3484843..3484845,3485119..3485121,
+ 3485125..3485127,3485152..3485157,3485164..3485166,
+ 3485173..3485175,3485194..3485196,3485200..3485202,
+ 3485212..3485214,3485218..3485220,3485272..3485277,
+ 3485311..3485319,3485404..3485406,3485488..3485490))
+ /gene="metF"
+ /locus_tag="SARI_03551"
+ /note="FAD binding site [chemical binding]; other site"
+ /db_xref="CDD:238299"
+ gene complement(3485862..3487418)
+ /locus_tag="SARI_03552"
+ CDS complement(3485862..3487418)
+ /locus_tag="SARI_03552"
+ /inference="protein motif:Gene3D:IPR008334"
+ /inference="protein motif:HMMPanther:IPR006179"
+ /inference="protein motif:HMMPfam:IPR004843"
+ /inference="protein motif:HMMPfam:IPR008334"
+ /inference="protein motif:ScanRegExp:IPR006146"
+ /inference="protein motif:superfamily:IPR008334"
+ /inference="similar to AA sequence:INSD:CAD09520.1"
+ /note="'KEGG: eci:UTI89_C4530 7.7e-260 hypothetical
+ protein K01081;
+ COG: COG0737 5-nucleotidase/2,3-cyclic phosphodiesterase
+ and related esterases;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572509.1"
+ /db_xref="GI:161505397"
+ /db_xref="InterPro:IPR004843"
+ /db_xref="InterPro:IPR006146"
+ /db_xref="InterPro:IPR006179"
+ /db_xref="InterPro:IPR008334"
+ /translation="MKVKLLAAGILFTLPFWACAKDVTIIYTNDLHAHVEPYKVPWIA
+ DGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTVPYISSLTKGKAIIDILNTMQY
+ DAATIGNHEFDHGWDNTLLQLSRAKFPIVQGNIYYEDSSKSFWDKPYTIVEKDGVKIG
+ VIGLHGVFAFNDTVSAATRVGIEARDEIKWLQRYIDELKGKVDLTVALIHEGTPARQS
+ SMGNTDVRRALDKDIQTASQVKGLDILITGHAHVGTPEPIKVGNTLILSTDSGGIDVG
+ KLVLDYQEKPHQFTVKNFELKTIFADEWKPDPQTKQVIDGWNKKLDKVVQQTVAQSPV
+ ELTRAYGESSSLGNLAADALLFTAGKDTQLALTNSGGIRNEIPAGAVTMGAVISTFPF
+ PNELVTMDLTGKQLRSLMEHGAGLSNGVLQVSKGLEMKYDSSKPIGQRVTVLTLNGKP
+ IDDATVYHIATNSFLADGGDGFAAFTEGQARNTSGGYYVSNAIVDYFKAGNTITDEQL
+ KGMRVADVKK"
+ misc_feature complement(3485865..3487412)
+ /locus_tag="SARI_03552"
+ /note="5'-nucleotidase/2',3'-cyclic
+ phosphodiesterase and related esterases [Nucleotide
+ transport and metabolism]; Region: UshA; COG0737"
+ /db_xref="CDD:223808"
+ misc_feature complement(3486531..3487352)
+ /locus_tag="SARI_03552"
+ /note="Escherichia coli UshA-like family, N-terminal
+ metallophosphatase domain; Region: MPP_UshA_N_like;
+ cd00845"
+ /db_xref="CDD:163620"
+ misc_feature complement(order(3486666..3486668,3486672..3486674,
+ 3486789..3486791,3487089..3487094,3487188..3487190,
+ 3487323..3487325,3487329..3487331))
+ /locus_tag="SARI_03552"
+ /note="active site"
+ /db_xref="CDD:163620"
+ misc_feature complement(order(3486666..3486668,3486672..3486674,
+ 3486789..3486791,3487092..3487094,3487188..3487190,
+ 3487323..3487325,3487329..3487331))
+ /locus_tag="SARI_03552"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:163620"
+ misc_feature complement(3486003..3486407)
+ /locus_tag="SARI_03552"
+ /note="5'-nucleotidase, C-terminal domain; Region:
+ 5_nucleotid_C; pfam02872"
+ /db_xref="CDD:217260"
+ gene 3487531..3488244
+ /locus_tag="SARI_03553"
+ CDS 3487531..3488244
+ /locus_tag="SARI_03553"
+ /inference="similar to AA sequence:INSD:AAL22943.1"
+ /note="'COG: NOG06319 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572510.1"
+ /db_xref="GI:161505398"
+ /translation="MYFLFSFDAVRGNVLHLSCNFTLLSAGKSLHYHWKGIAPPEGEN
+ GDIIHRIAIKERQFLQRSQFDEIQYGPAALKRNAQGTILRPVITAHGHFRVLKNRFPD
+ VATHIIAHECFLRGAVITAWAERFRQRLSSLWFVEEEINDDDCRAEWQLLGKTWQGWW
+ QNQWQLWGQGHNRKMVCSLTGSHLEQGVAVNLAASRRFVTWLWQQPEFQQSAHYSAKR
+ VTQILYFLTEKYNSQWNHI"
+ gene 3488924..3489109
+ /locus_tag="SARI_03554"
+ CDS 3488924..3489109
+ /locus_tag="SARI_03554"
+ /inference="similar to AA sequence:REFSEQ:YP_218981.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572511.1"
+ /db_xref="GI:161505399"
+ /translation="MCLTLSDEIQTLLANANENTGIQSGWALFWALLFPPVGIAIIQA
+ KMNRFIVANAENASDEE"
+ gene complement(3489172..3491604)
+ /gene="metL"
+ /locus_tag="SARI_03555"
+ CDS complement(3489172..3491604)
+ /gene="metL"
+ /locus_tag="SARI_03555"
+ /inference="protein motif:Gene3D:IPR001048"
+ /inference="protein motif:HMMPfam:IPR001048"
+ /inference="protein motif:HMMPfam:IPR001342"
+ /inference="protein motif:HMMPfam:IPR005106"
+ /inference="protein motif:HMMPIR:IPR011147"
+ /inference="protein motif:HMMTigr:IPR001341"
+ /inference="protein motif:ScanRegExp:IPR001341"
+ /inference="protein motif:ScanRegExp:IPR001342"
+ /inference="protein motif:superfamily:IPR001048"
+ /note="multifunctional homodimeric enzyme that catalyzes
+ the phosphorylation of aspartate to form
+ aspartyl-4-phosphate as well as conversion of aspartate
+ semialdehyde to homoserine; functions in a number of amino
+ acid biosynthetic pathways"
+ /codon_start=1
+ /transl_table=11
+ /product="bifunctional aspartate kinase II/homoserine
+ dehydrogenase II"
+ /protein_id="YP_001572512.1"
+ /db_xref="GI:161505400"
+ /db_xref="InterPro:IPR001048"
+ /db_xref="InterPro:IPR001341"
+ /db_xref="InterPro:IPR001342"
+ /db_xref="InterPro:IPR005106"
+ /db_xref="InterPro:IPR011147"
+ /translation="MSVIAQAGAKGRQLHKFGGSSLADVKCYLRVAGIMAEYSQPDDM
+ MVVSAAGSTTNQLISWLKLSQTDRLSAHQVLQTLRRYQCDLISGLLPADAADDLTSAF
+ ISDLERLAALLDGGVTDAVYAEIVGHGEIWSARLMSAVLNQQGLEAAWLDARAFLRAE
+ RAAQPQVDEGLSYPLLQQLLAQHPGKRLVVTGFISRNHDGETVLLGRNGSDYSATQIG
+ ALAGVSRVTIWSDVAGVYSADPRKVKDACLLPLLRLDEASELARLAAPVLHARTLQPV
+ SGSDIDLQLRCSYTPDQGSTRIERVLASGTGARIVTSHDDICLIEFQVPASQDFRLAH
+ KELDHILKRAQARPLAVGVHRDRQLLQFCYTAEVADSVLKLLDDVGLPGELRLRQGLA
+ LVAMVGAGVTRNPLHCHRFWQQLKGQPVEFTWQSEEGISLVAVLRTGPTESLIQGLHQ
+ SIFRAEKRIGLMLFGKGNIGSRWLELFAREQSTLSARTGFEFVLAGVVDSRRSLLSYD
+ GLDASRALAFFDDEAVEQDEESLFLWMRAHPYDDLVVLDVTASEQLADQYLDFASHGF
+ HVISANKLAGASASDKYRQIHDAFEKTGRYWLYNATVGAGLPINHTVRDLIDSGDTIL
+ SISGIFSGTLSWLFLQFDGTVPFTDLVDQAWQQGLTEPDPRVDLSGKDVMRKLVILAR
+ EAGYDIEPDQVRVESLVPAHCEEGSIDHFFENGDALNEQMVQRLEAARELGLVLRYVA
+ RFDANGKARVGVEAVRPEHPLAALLPCDNVFAIESRWYRDNPLVIRGPGAGRDVTAGA
+ IQSDINRLAQLL"
+ misc_feature complement(3489175..3491604)
+ /gene="metL"
+ /locus_tag="SARI_03555"
+ /note="bifunctional aspartate kinase II/homoserine
+ dehydrogenase II; Provisional; Region: metL; PRK09466"
+ /db_xref="CDD:236530"
+ misc_feature complement(3490708..3491568)
+ /gene="metL"
+ /locus_tag="SARI_03555"
+ /note="AAK_AK-HSDH: Amino Acid Kinase Superfamily (AAK),
+ AK-HSDH; this CD includes the N-terminal catalytic domain
+ of aspartokinase (AK) of the bifunctional enzyme AK -
+ homoserine dehydrogenase (HSDH). These aspartokinases are
+ found in bacteria (E. coli...; Region: AAK_AK-HSDH;
+ cd04257"
+ /db_xref="CDD:239790"
+ misc_feature complement(order(3490798..3490800,3490837..3490839,
+ 3490972..3490974,3491215..3491217,3491443..3491445,
+ 3491557..3491559))
+ /gene="metL"
+ /locus_tag="SARI_03555"
+ /note="putative catalytic residues [active]"
+ /db_xref="CDD:239790"
+ misc_feature complement(order(3490897..3490902,3490909..3490914,
+ 3491545..3491553,3491557..3491559))
+ /gene="metL"
+ /locus_tag="SARI_03555"
+ /note="putative nucleotide binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:239790"
+ misc_feature complement(order(3491215..3491217,3491443..3491445,
+ 3491458..3491463))
+ /gene="metL"
+ /locus_tag="SARI_03555"
+ /note="putative aspartate binding site [chemical binding];
+ other site"
+ /db_xref="CDD:239790"
+ misc_feature complement(3490246..3490431)
+ /gene="metL"
+ /locus_tag="SARI_03555"
+ /note="ACT domains C-terminal to the catalytic domain of
+ aspartokinase (AK; 4-L-aspartate-4-phosphotransferase);
+ Region: ACT_AK-like_2; cd04892"
+ /db_xref="CDD:153164"
+ misc_feature complement(3489805..3490212)
+ /gene="metL"
+ /locus_tag="SARI_03555"
+ /note="Homoserine dehydrogenase, NAD binding domain;
+ Region: NAD_binding_3; pfam03447"
+ /db_xref="CDD:217564"
+ misc_feature complement(3489196..3489783)
+ /gene="metL"
+ /locus_tag="SARI_03555"
+ /note="Homoserine dehydrogenase; Region: Homoserine_dh;
+ pfam00742"
+ /db_xref="CDD:216092"
+ gene complement(3491607..3492767)
+ /locus_tag="SARI_03556"
+ CDS complement(3491607..3492767)
+ /locus_tag="SARI_03556"
+ /inference="protein motif:HMMPfam:IPR000277"
+ /inference="protein motif:HMMTigr:IPR011821"
+ /inference="protein motif:ScanRegExp:IPR000277"
+ /inference="similar to AA sequence:INSD:ABF06014.1"
+ /note="catalyzes the formation of cystathionine from
+ L-cysteine and O-succinyl-L-homoserine"
+ /codon_start=1
+ /transl_table=11
+ /product="cystathionine gamma-synthase"
+ /protein_id="YP_001572513.2"
+ /db_xref="GI:448236279"
+ /db_xref="InterPro:IPR000277"
+ /db_xref="InterPro:IPR011821"
+ /translation="MTRKQATIAVRSGLNDDEQYGCVVPPIHLSSTYNFTGFNEPRAH
+ DYSRRGNPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFLKPGDLLIAPHDCYG
+ GSYRLFDSLATRGCYRVRFVDQSDERALQAALEEKPKLVLVESPSNPLLRVVDIAKIC
+ RLAREASVVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGAVIAKDPEI
+ VTELAWWANNIGVTGGAFDSYLLLRGLRTLVPRMEVAQRNAQAIVDYLQTQPLVKKLY
+ HPSLPENQGHEIAARQQKGFGAMLSFELDGDEETLRRFLGGLSLFTLAESLGGVESLI
+ SHAATMTHAGMSPQARAAAGISETLLRISTGIEDGEDLIADLENGFRAANKG"
+ misc_feature complement(3491610..3492767)
+ /locus_tag="SARI_03556"
+ /note="cystathionine gamma-synthase; Provisional; Region:
+ PRK08045"
+ /db_xref="CDD:169194"
+ misc_feature complement(3491625..3492707)
+ /locus_tag="SARI_03556"
+ /note="CGS_like: Cystathionine gamma-synthase is a PLP
+ dependent enzyme and catalyzes the committed step of
+ methionine biosynthesis. This pathway is unique to
+ microorganisms and plants, rendering the enzyme an
+ attractive target for the development of...; Region:
+ CGS_like; cd00614"
+ /db_xref="CDD:99738"
+ misc_feature complement(order(3491820..3491822,3492057..3492062,
+ 3492066..3492068,3492096..3492098,3492147..3492149,
+ 3492153..3492155,3492177..3492179,3492441..3492443,
+ 3492450..3492452,3492465..3492467,3492534..3492539,
+ 3492543..3492548,3492624..3492626,3492630..3492632,
+ 3492663..3492668,3492672..3492683))
+ /locus_tag="SARI_03556"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99738"
+ misc_feature complement(order(3492147..3492149,3492174..3492179,
+ 3492183..3492185,3492249..3492251,3492336..3492338,
+ 3492465..3492467,3492537..3492545))
+ /locus_tag="SARI_03556"
+ /note="substrate-cofactor binding pocket; other site"
+ /db_xref="CDD:99738"
+ misc_feature complement(order(3492174..3492179,3492183..3492185,
+ 3492240..3492242,3492249..3492251,3492465..3492467,
+ 3492537..3492545))
+ /locus_tag="SARI_03556"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:99738"
+ misc_feature complement(3492174..3492176)
+ /locus_tag="SARI_03556"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:99738"
+ gene 3492975..3493349
+ /locus_tag="SARI_03557"
+ CDS 3492975..3493349
+ /locus_tag="SARI_03557"
+ /inference="protein motif:BlastProDom:IPR002084"
+ /inference="protein motif:Gene3D:IPR002084"
+ /inference="protein motif:HMMPfam:IPR002084"
+ /inference="protein motif:superfamily:IPR010985"
+ /inference="similar to AA sequence:REFSEQ:NP_756745.1"
+ /note="when combined with S-adenosylmethionine represses
+ the expression of the methionine regulon and of proteins
+ involved in S-adenosylmethionine synthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="transcriptional repressor protein MetJ"
+ /protein_id="YP_001572514.1"
+ /db_xref="GI:161505402"
+ /db_xref="InterPro:IPR002084"
+ /db_xref="InterPro:IPR010985"
+ /translation="MVRAQVQTSILMTKRTKYLMAEWSGEYISPYAEHGKKSEQVKKI
+ TVSIPLKVLKILTDERTRRQVNNLRHATNSELLCEAFLHAFTGQPLPDDADLRKERSD
+ EIPEAAKEIMREMGIDPETWEY"
+ misc_feature 3493035..3493343
+ /locus_tag="SARI_03557"
+ /note="Met Repressor, MetJ. MetJ is a bacterial
+ regulatory protein that uses S-adenosylmethionine (SAM) as
+ a corepressor to regulate the production of Methionine.
+ MetJ binds arrays of two to five adjacent copies of an
+ eight base-pair 'metbox'...; Region:
+ Met_repressor_MetJ; cd00490"
+ /db_xref="CDD:119402"
+ misc_feature order(3493059..3493064,3493068..3493070,3493089..3493124,
+ 3493128..3493133,3493137..3493142,3493149..3493151,
+ 3493194..3493196,3493203..3493208,3493212..3493217,
+ 3493221..3493229,3493242..3493244)
+ /locus_tag="SARI_03557"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:119402"
+ misc_feature order(3493083..3493085,3493095..3493109,3493113..3493115,
+ 3493152..3493154,3493188..3493196)
+ /locus_tag="SARI_03557"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:119402"
+ misc_feature order(3493149..3493151,3493158..3493163,3493200..3493202,
+ 3493209..3493217,3493221..3493229,3493233..3493235,
+ 3493242..3493247)
+ /locus_tag="SARI_03557"
+ /note="corepressor binding sites; other site"
+ /db_xref="CDD:119402"
+ gene complement(3493504..3494928)
+ /locus_tag="SARI_03558"
+ CDS complement(3493504..3494928)
+ /locus_tag="SARI_03558"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="protein motif:HMMTigr:IPR001927"
+ /inference="similar to AA sequence:INSD:EAN08651.1"
+ /note="'KEGG: eci:UTI89_C4210 1.8e-38 yicJ; hypothetical
+ symporter YicJ K03292;
+ COG: COG2211 Na+/melibiose symporter and related
+ transporters;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572515.1"
+ /db_xref="GI:161505403"
+ /db_xref="InterPro:IPR001927"
+ /db_xref="InterPro:IPR011701"
+ /translation="MSSDGAIIGNNKSITVRPFGIRDKFGYLCGDLGTCFILGLVNSF
+ LMIYYTNVLGISGAIVGSLYFVTKLFDAFIDVGVGRLCDTSRLTAHGRFNPWVRRMKY
+ PFCIIAVVLFLPFVQDFSYTAKIIYICCSYFIYGSLLSTVSIPYGAMSAAISSNPEDR
+ VSLSTWRSVGSAIGGGATGFFIPILMYTTLVDGSQVISGQHFFWIAIGCGVLGFIFLS
+ LTCQLTTERVRVERKASMPVSVLLKGLARNKALIVLVVVDLLIVINQGLSGTNMTYLF
+ NDYFHNKEAMSVALLFTFGSLVLLAPSASWLTKRFGKKEASVGALLFAVAMYLIMFFI
+ HIIDAKVYLVFLFLATLGAGLFNLMIWAFMTDVCDYHQYVTGTREDGTVYGVNFFARK
+ VGQACAGAIGGFMLAIIGYQSSSMGGAVQTSAVQENIYTMANLLPASCLFLAAVILIY
+ FYPLNRKETLKMEETLNKFNGISQ"
+ misc_feature complement(3493525..3494868)
+ /locus_tag="SARI_03558"
+ /note="melibiose:sodium symporter; Provisional; Region:
+ PRK10429; cl15392"
+ /db_xref="CDD:199528"
+ misc_feature complement(3493561..3494859)
+ /locus_tag="SARI_03558"
+ /note="MFS/sugar transport protein; Region: MFS_2;
+ pfam13347"
+ /db_xref="CDD:222060"
+ gene complement(3495015..3495695)
+ /locus_tag="SARI_03559"
+ CDS complement(3495015..3495695)
+ /locus_tag="SARI_03559"
+ /inference="protein motif:HMMPfam:IPR009331"
+ /inference="similar to AA sequence:INSD:AAL22891.1"
+ /note="'COG: NOG25848 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572516.1"
+ /db_xref="GI:161505404"
+ /db_xref="InterPro:IPR009331"
+ /translation="MKLKFLLLLIPLLSAATHAGYVDYRHEYYDDGRNYDRIYMSHRF
+ ATGFGVAVEAISRSDDAQSNDAWNNMESNGNEYTASYQFTWQGLVWQPGIAIETGDNI
+ SIYKPYIRVQYNINDNWWTAFRYRQEYMRRNSDGKDDRMVYRPEAWLGYNVNNWMFEL
+ NGIYKIADSEDLYNNKKEDYEYNFRVAYKIGSWVPFVEMGNVSSGYNTTTTDDRQTRY
+ RVGLGYNF"
+ misc_feature complement(3495018..3495656)
+ /locus_tag="SARI_03559"
+ /note="Oligogalacturonate-specific porin protein (KdgM);
+ Region: KdgM; cl11629"
+ /db_xref="CDD:245728"
+ gene complement(3496033..3496332)
+ /locus_tag="SARI_03560"
+ CDS complement(3496033..3496332)
+ /locus_tag="SARI_03560"
+ /inference="protein motif:FPrintScan:IPR002150"
+ /inference="protein motif:HMMPfam:IPR002150"
+ /inference="protein motif:HMMTigr:IPR002150"
+ /inference="protein motif:ScanRegExp:IPR002150"
+ /inference="similar to AA sequence:REFSEQ:YP_218972.1"
+ /note="'COG: COG0254 Ribosomal protein L31;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572517.1"
+ /db_xref="GI:161505405"
+ /db_xref="InterPro:IPR002150"
+ /translation="MRIKPFTINFAWCLALGLEERRGLTLRFPMKKGIHPNYVEITAT
+ CSCGNVIKTHSTVGHDLNLDVCGKCHPFFTGKQRVVDTGGRVERFNKRFSIPGSK"
+ misc_feature complement(3496036..3496245)
+ /locus_tag="SARI_03560"
+ /note="50S ribosomal protein L31; Reviewed; Region: rpmE;
+ PRK00019"
+ /db_xref="CDD:234576"
+ gene 3496449..3498647
+ /locus_tag="SARI_03561"
+ CDS 3496449..3498647
+ /locus_tag="SARI_03561"
+ /inference="protein motif:HMMPfam:IPR001650"
+ /inference="protein motif:HMMPfam:IPR011545"
+ /inference="protein motif:HMMSmart:IPR001650"
+ /inference="protein motif:HMMSmart:IPR014001"
+ /inference="protein motif:HMMTigr:IPR005259"
+ /note="'binding of PriA to forked DNA starts the assembly
+ of the primosome, also possesses 3'-5' helicase activity'"
+ /codon_start=1
+ /transl_table=11
+ /product="primosome assembly protein PriA"
+ /protein_id="YP_001572518.2"
+ /db_xref="GI:448236280"
+ /db_xref="InterPro:IPR001650"
+ /db_xref="InterPro:IPR005259"
+ /db_xref="InterPro:IPR011545"
+ /db_xref="InterPro:IPR014001"
+ /translation="MFVAHVALPVPLPRTFDYLLPEGGVVKAGCRVRVPFGKQQERVG
+ IVVSVSDHSELPLDELKSVIEILDNEPVFSTPVWRLLLWAADYYHHPLGDVLFHALPI
+ LLRQGKPASNAPLWYWFATEEGLAVDINSLKRSAKQQQALAALRQGKIWRYQVAELDF
+ TDATLQTLRRKGLCELASETPTFTDWRERYTVAGERLRLNTEQATAVGAIHSALDDFS
+ AWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVL
+ HSGLNDSERLSAWLKAKNGEAAIVIGTRSSLFTPFKNLGVIVIDEEHDSSYKQQEGWR
+ YHARDLAVYRAHSEQIPIILGSATPALETLCNVRQKKYRMLRLTRRAGNARPALQHVL
+ DLKGQRLQAGLAPALIARMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDH
+ YYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHMLPVGLGTEQLEQVLAPFFPGVPVS
+ RIDRDTTSRKGALEQHLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSA
+ DFRSAERFAQLYTQVSGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAE
+ RQTLQLPPWTSHVIIRAEDHHNQQAPIFLQQLRKLIQASPLSDDKLWILGPVPALAPK
+ RGGRYRWQILLQHPSRIHLQHIISGTLALINTLPEARKVKWVLDVDPIEG"
+ misc_feature 3496449..3498641
+ /locus_tag="SARI_03561"
+ /note="primosome assembly protein PriA; Validated; Region:
+ PRK05580"
+ /db_xref="CDD:235514"
+ misc_feature 3497109..3497525
+ /locus_tag="SARI_03561"
+ /note="DEAD-like helicases superfamily. A diverse family
+ of proteins involved in ATP-dependent RNA or DNA
+ unwinding. This domain contains the ATP-binding region;
+ Region: DEXDc; cd00046"
+ /db_xref="CDD:238005"
+ misc_feature 3497127..3497141
+ /locus_tag="SARI_03561"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238005"
+ misc_feature 3497406..3497417
+ /locus_tag="SARI_03561"
+ /note="putative Mg++ binding site [ion binding]; other
+ site"
+ /db_xref="CDD:238005"
+ misc_feature 3497922..3498215
+ /locus_tag="SARI_03561"
+ /note="helicase superfamily c-terminal domain; Region:
+ HELICc; smart00490"
+ /db_xref="CDD:197757"
+ misc_feature order(3498087..3498089,3498174..3498176,3498198..3498200,
+ 3498207..3498209)
+ /locus_tag="SARI_03561"
+ /note="ATP-binding site [chemical binding]; other site"
+ /db_xref="CDD:238034"
+ gene 3498802..3499827
+ /locus_tag="SARI_03562"
+ CDS 3498802..3499827
+ /locus_tag="SARI_03562"
+ /inference="protein motif:HMMPfam:IPR000843"
+ /inference="protein motif:HMMPfam:IPR001761"
+ /inference="protein motif:HMMSmart:IPR000843"
+ /inference="protein motif:ScanRegExp:IPR000843"
+ /inference="protein motif:superfamily:IPR010982"
+ /inference="similar to AA sequence:REFSEQ:NP_457958.1"
+ /note="'negatively controls the transcription initiation
+ of genes such as deoCABD, udp, and cdd encoding
+ catabolizing enzymes and nupC, nupG, and tsx encoding
+ transporting and pore-forming proteins'"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional regulator CytR"
+ /protein_id="YP_001572519.2"
+ /db_xref="GI:448236281"
+ /db_xref="InterPro:IPR000843"
+ /db_xref="InterPro:IPR001761"
+ /db_xref="InterPro:IPR010982"
+ /translation="MKSNKQVTAATMKDVALKAKVSTATVSRALMNPDKVSQSTRSRV
+ EQAALEVGYFPQSMGRNVKRNESRTILIIVPDICDPFFSEIIRGIEVTAAEQGYLVLI
+ GDCAHQHQKEKTFLNLIITKQIDGMVLLSSRLPFDASVEEQRNLPPMVMSNEFAPELE
+ LPTVHIDNLTAAFNAMNYLLDLGHQRIGCIAGPEDMPLCHYRLQGYVQALRRSGIVVD
+ PHYIARGDFTYEAGANALKQLLEQPLPPTAVFCHSDVMALGALSWAKRQGLKVPDDLS
+ IIGFDNIALAEFCDPPLTTVAQPRFDIGREAMLLLLDQMQGQNVSSGSRLMDCELIIR
+ GSTRALP"
+ misc_feature 3498838..3498993
+ /locus_tag="SARI_03562"
+ /note="Helix-turn-helix (HTH) DNA binding domain of the
+ LacI family of transcriptional regulators; Region:
+ HTH_LacI; cd01392"
+ /db_xref="CDD:143331"
+ misc_feature order(3498838..3498840,3498862..3498876,3498880..3498885,
+ 3498892..3498894,3498907..3498912,3498919..3498921,
+ 3498958..3498960,3498967..3498969,3498976..3498981,
+ 3498985..3498990)
+ /locus_tag="SARI_03562"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:143331"
+ misc_feature 3498898..3499824
+ /locus_tag="SARI_03562"
+ /note="DNA-binding transcriptional regulator CytR;
+ Provisional; Region: PRK11041"
+ /db_xref="CDD:182923"
+ misc_feature 3498958..3498987
+ /locus_tag="SARI_03562"
+ /note="domain linker motif; other site"
+ /db_xref="CDD:143331"
+ misc_feature 3499006..3499809
+ /locus_tag="SARI_03562"
+ /note="Ligand-binding domain of an uncharacterized
+ transcription regulator from Actinobacillus succinogenes
+ and its close homologs from other bacteria; Region:
+ PBP1_LacI_like_6; cd06284"
+ /db_xref="CDD:107279"
+ misc_feature order(3499006..3499008,3499069..3499071,3499096..3499098,
+ 3499105..3499107,3499111..3499113,3499168..3499170,
+ 3499486..3499488,3499585..3499587)
+ /locus_tag="SARI_03562"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:107279"
+ misc_feature order(3499036..3499038,3499405..3499407,3499642..3499644,
+ 3499693..3499695)
+ /locus_tag="SARI_03562"
+ /note="ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:107279"
+ gene 3500014..3500895
+ /locus_tag="SARI_03563"
+ CDS 3500014..3500895
+ /locus_tag="SARI_03563"
+ /inference="protein motif:HMMPfam:IPR007730"
+ /inference="protein motif:HMMTigr:IPR011930"
+ /inference="similar to AA sequence:INSD:AAL22933.1"
+ /note="'KEGG: hsa:6595 8.6e-07 SMARCA2, SNF2L2; SWI/SNF
+ related, matrix associated, actin dependent regulator of
+ chromatin, subfamily a, member 2 K01529;
+ COG: COG3087 Cell division protein;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="essential cell division protein FtsN"
+ /protein_id="YP_001572520.1"
+ /db_xref="GI:161505408"
+ /db_xref="InterPro:IPR007730"
+ /db_xref="InterPro:IPR011930"
+ /translation="MPAVSPAMVAIAAAVLVTFIGGLYFITHHKKEESETLQNQKVTG
+ NGLPPKPEERWRYIKELESRQPGVRTPTEPSAGGEVMNPNQLTSEQRQLLAQMQADMR
+ QQPTQLNEVPWNEQTPEQRQQTLQRQRQAQQQQWTQTQPVQQPRTQPRVNEQPQTRTV
+ QSAPAQPVRQSQPPKQMASQQPYQDLLQTPTHTSAAAPKAAPITRAPEAPKAATEKKD
+ ERRWMVQCGSFKGAGQAESVRAQLAFEGFDSKITTNNGWNRVVIGPVKGKENADSTIN
+ RLKMAGHTNCIRLATGG"
+ misc_feature 3500065..3500892
+ /locus_tag="SARI_03563"
+ /note="essential cell division protein FtsN; Provisional;
+ Region: PRK10927"
+ /db_xref="CDD:236797"
+ misc_feature 3500065..3500892
+ /locus_tag="SARI_03563"
+ /note="cell division protein FtsN; Provisional; Region:
+ PRK12757"
+ /db_xref="CDD:237191"
+ gene 3500987..3501517
+ /locus_tag="SARI_03564"
+ CDS 3500987..3501517
+ /locus_tag="SARI_03564"
+ /inference="protein motif:HMMPfam:IPR001353"
+ /inference="similar to AA sequence:INSD:AAO71033.1"
+ /note="heat shock protein involved in degradation of
+ misfolded proteins"
+ /codon_start=1
+ /transl_table=11
+ /product="ATP-dependent protease peptidase subunit"
+ /protein_id="YP_001572521.2"
+ /db_xref="GI:228879511"
+ /db_xref="InterPro:IPR001353"
+ /translation="MTTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVI
+ AGFAGGTADAFTLFELFERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADET
+ ASLIITGNGDVVQPENDLIAIGSGGPYAQAAARALLENTELGAREIAEKALDIAGDIC
+ IYTNHFHTIEELTSKA"
+ misc_feature 3500990..3501502
+ /locus_tag="SARI_03564"
+ /note="Protease HslV and the ATPase/chaperone HslU are
+ part of an ATP-dependent proteolytic system that is the
+ prokaryotic homolog of the proteasome. HslV is a dimer of
+ hexamers (a dodecamer) that forms a central proteolytic
+ chamber with active sites on the...; Region:
+ protease_HslV; cd01913"
+ /db_xref="CDD:238894"
+ misc_feature order(3500990..3500992,3501038..3501040,3501044..3501046,
+ 3501086..3501088,3501359..3501361)
+ /locus_tag="SARI_03564"
+ /note="active site"
+ /db_xref="CDD:238894"
+ misc_feature order(3501059..3501067,3501236..3501238,3501317..3501319,
+ 3501329..3501331,3501368..3501373,3501380..3501382,
+ 3501404..3501406,3501437..3501439,3501449..3501451,
+ 3501458..3501463,3501467..3501469)
+ /locus_tag="SARI_03564"
+ /note="HslU subunit interaction site [polypeptide
+ binding]; other site"
+ /db_xref="CDD:238894"
+ gene 3501527..3502858
+ /gene="hslU"
+ /locus_tag="SARI_03565"
+ CDS 3501527..3502858
+ /gene="hslU"
+ /locus_tag="SARI_03565"
+ /inference="protein motif:HMMPfam:IPR013093"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR004491"
+ /inference="similar to AA sequence:REFSEQ:NP_457961.1"
+ /note="heat shock protein involved in degradation of
+ misfolded proteins"
+ /codon_start=1
+ /transl_table=11
+ /product="ATP-dependent protease ATP-binding subunit HslU"
+ /protein_id="YP_001572522.1"
+ /db_xref="GI:161505410"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR004491"
+ /db_xref="InterPro:IPR013093"
+ /translation="MSEMTPREIVSELNKHIIGQDNAKRSVAIALRNRWRRMQLDEEL
+ RHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRD
+ LTDAAVKMVRVQAIEKNRYRAEELAEERILDVLVPPAKNNWGQTEQQQEPSAARQTFR
+ KKLREGQLDDKEIEINLAAAPMGVEIMAPPGMEEMTSQLQSLFQNLGGQKQKPRKLKI
+ KDAMKLLVEEEAAKLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGETSGPDVSREG
+ VQRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQVAKPSDLIPELQGRLPIRVELQA
+ LTTSDFERILTEPNASVTVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNETTENIGA
+ RRLHTVLERLMEEISYNASDLHGQNITIDAEYVSKHLDALVADEDLSRFIL"
+ misc_feature 3501527..3502855
+ /gene="hslU"
+ /locus_tag="SARI_03565"
+ /note="ATP-dependent protease ATP-binding subunit HslU;
+ Provisional; Region: hslU; PRK05201"
+ /db_xref="CDD:235364"
+ misc_feature 3501578..>3501856
+ /gene="hslU"
+ /locus_tag="SARI_03565"
+ /note="The AAA+ (ATPases Associated with a wide variety of
+ cellular Activities) superfamily represents an ancient
+ group of ATPases belonging to the ASCE (for additional
+ strand, catalytic E) division of the P-loop NTPase fold.
+ The ASCE division also includes ABC; Region: AAA; cd00009"
+ /db_xref="CDD:99707"
+ misc_feature 3501695..3501718
+ /gene="hslU"
+ /locus_tag="SARI_03565"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature 3501698..3501721
+ /gene="hslU"
+ /locus_tag="SARI_03565"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:99707"
+ misc_feature 3502034..3502513
+ /gene="hslU"
+ /locus_tag="SARI_03565"
+ /note="AAA domain (Cdc48 subfamily); Region: AAA_2;
+ pfam07724"
+ /db_xref="CDD:219536"
+ misc_feature 3502280..3502297
+ /gene="hslU"
+ /locus_tag="SARI_03565"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature 3502499..3502501
+ /gene="hslU"
+ /locus_tag="SARI_03565"
+ /note="arginine finger; other site"
+ /db_xref="CDD:99707"
+ misc_feature 3502529..3502795
+ /gene="hslU"
+ /locus_tag="SARI_03565"
+ /note="C-terminal, D2-small domain, of ClpB protein;
+ Region: ClpB_D2-small; smart01086"
+ /db_xref="CDD:198154"
+ gene 3502925..3503854
+ /locus_tag="SARI_03566"
+ CDS 3502925..3503854
+ /locus_tag="SARI_03566"
+ /inference="protein motif:HMMPfam:IPR000537"
+ /inference="protein motif:HMMTigr:IPR004657"
+ /inference="similar to AA sequence:REFSEQ:NP_462971.1"
+ /note="'catalyzes the formation of dimethylmenaquinone
+ from 1,4-dihydroxy-2-naphthoate and octaprenyl
+ diphosphate'"
+ /codon_start=1
+ /transl_table=11
+ /product="1,4-dihydroxy-2-naphthoate
+ octaprenyltransferase"
+ /protein_id="YP_001572523.1"
+ /db_xref="GI:161505411"
+ /db_xref="InterPro:IPR000537"
+ /db_xref="InterPro:IPR004657"
+ /translation="MTEQQQISRTQAWLESLRPKTLPLAFAAIIVGTALAWWQGYFDP
+ LVALLALITAGLLQILSNLANDYGDAVKGSDKPDRIGPLRGMQKGVITRQEMKRALII
+ TVVLICISGLALVVVACHTLTDFVGFLILGGLSIVAAITYTVGNRPYGYIGLGDISVL
+ VFFGWLSVMGSWYLQAHTLIPALILPATACGLLATAVLNINNLRDINSDRENGKNTLV
+ VRLGDVNARRYHACLLLGALICLALFNLLSLHSIWGWLFILAAPLLIKQARYVMRERE
+ PAAMRPMLERTVKGALLTNLLFVIGILLSQWAV"
+ misc_feature 3502976..3503827
+ /locus_tag="SARI_03566"
+ /note="1,4-dihydroxy-2-naphthoate octaprenyltransferase;
+ Region: menA; TIGR00751"
+ /db_xref="CDD:129834"
+ misc_feature 3502988..>3503614
+ /locus_tag="SARI_03566"
+ /note="UbiA prenyltransferase family; Region: UbiA;
+ pfam01040"
+ /db_xref="CDD:216260"
+ gene 3503947..3504432
+ /locus_tag="SARI_03567"
+ CDS 3503947..3504432
+ /locus_tag="SARI_03567"
+ /inference="protein motif:HMMPfam:IPR005493"
+ /inference="protein motif:HMMTigr:IPR010203"
+ /inference="similar to AA sequence:INSD:AAV79696.1"
+ /note="regulator of RNase E; increases half-life and
+ abundance of RNAs; interacts with RNase E possibly
+ inhibiting catalytic activity"
+ /codon_start=1
+ /transl_table=11
+ /product="ribonuclease activity regulator protein RraA"
+ /protein_id="YP_001572524.1"
+ /db_xref="GI:161505412"
+ /db_xref="InterPro:IPR005493"
+ /db_xref="InterPro:IPR010203"
+ /translation="MKYDTSELCDIYQEDVNVVEPLFSNFGGRSSFGGQIITVKCFED
+ NGLLYDLLEQNGRGRVLLVDGGGSVRRALVDAELASLATQNEWEGLVIYGAVRQVDDL
+ EELDIGIQAIAAIPVGAAGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI
+ E"
+ misc_feature 3503947..3504423
+ /locus_tag="SARI_03567"
+ /note="ribonuclease activity regulator protein RraA;
+ Provisional; Region: PRK09372"
+ /db_xref="CDD:236487"
+ gene 3504429..3504569
+ /locus_tag="SARI_03568"
+ CDS 3504429..3504569
+ /locus_tag="SARI_03568"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572525.1"
+ /db_xref="GI:161505413"
+ /translation="MIKKGAVRRLFYTLSLIAGWQLTPYPAHRYPHSKSSIDFASGQG
+ GR"
+ gene complement(3504654..3504893)
+ /locus_tag="SARI_03569"
+ CDS complement(3504654..3504893)
+ /locus_tag="SARI_03569"
+ /inference="protein motif:HMMPfam:IPR009252"
+ /inference="similar to AA sequence:INSD:AAV79695.1"
+ /note="'KEGG: rno:85240 0.00031 Plcb2; phospholipase C,
+ beta 2 K05858;
+ COG: COG3074 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572526.1"
+ /db_xref="GI:161505414"
+ /db_xref="InterPro:IPR009252"
+ /translation="MSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLAQEVQSA
+ QHQREELERENNSLKEQQSGWQERLQALLGRMEEV"
+ misc_feature complement(3504657..3504893)
+ /locus_tag="SARI_03569"
+ /note="septal ring assembly protein ZapB; Provisional;
+ Region: PRK15422"
+ /db_xref="CDD:185320"
+ gene 3505290..3506135
+ /locus_tag="SARI_03570"
+ CDS 3505290..3506135
+ /locus_tag="SARI_03570"
+ /inference="protein motif:BlastProDom:IPR000425"
+ /inference="protein motif:Gene3D:IPR000425"
+ /inference="protein motif:HMMPanther:IPR000425"
+ /inference="protein motif:HMMPfam:IPR000425"
+ /inference="protein motif:HMMPIR:IPR012269"
+ /inference="protein motif:HMMTigr:IPR012269"
+ /inference="protein motif:ScanRegExp:IPR000425"
+ /inference="protein motif:superfamily:IPR000425"
+ /inference="similar to AA sequence:INSD:AAL22927.1"
+ /note="'KEGG: fal:FRAAL3366 0.0042 putative arsenate
+ reductase (partial match);
+ COG: COG0580 Glycerol uptake facilitator and related
+ permeases (Major Intrinsic Protein Family);
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572527.1"
+ /db_xref="GI:161505415"
+ /db_xref="InterPro:IPR000425"
+ /db_xref="InterPro:IPR012269"
+ /translation="MSQTSTLKGQCIAEFLGTGLLIFFGVGCVAALKVAGATFGQWEI
+ SVIWGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVVPFIISQIAGAFCAAA
+ LVYGLYYNLFIDFEQTHHIVRGSIESLDLAGIFSTYPNPHINFAQAFAVEMVITAILM
+ GLILALTDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKMFAGLAG
+ WGEIAFTGGRDIPYFLVPLFGPIVGAILGAFTYRKFIGRHLPCDTCVVEEKDSTATTQ
+ QNASL"
+ misc_feature 3505317..3506051
+ /locus_tag="SARI_03570"
+ /note="Major intrinsic protein (MIP) superfamily. Members
+ of the MIP superfamily function as membrane channels that
+ selectively transport water, small neutral molecules, and
+ ions out of and between cells. The channel proteins share
+ a common fold: the N-terminal...; Region: MIP; cd00333"
+ /db_xref="CDD:238204"
+ misc_feature order(3505431..3505433,3505485..3505493,3505884..3505889,
+ 3505896..3505898,3505905..3505907)
+ /locus_tag="SARI_03570"
+ /note="amphipathic channel; other site"
+ /db_xref="CDD:238204"
+ misc_feature order(3505491..3505499,3505896..3505904)
+ /locus_tag="SARI_03570"
+ /note="Asn-Pro-Ala signature motifs; other site"
+ /db_xref="CDD:238204"
+ gene 3506156..3507664
+ /gene="glpK"
+ /locus_tag="SARI_03571"
+ CDS 3506156..3507664
+ /gene="glpK"
+ /locus_tag="SARI_03571"
+ /inference="protein motif:HMMPanther:IPR000577"
+ /inference="protein motif:HMMPanther:IPR005999"
+ /inference="protein motif:HMMPfam:IPR000577"
+ /inference="protein motif:HMMTigr:IPR005999"
+ /inference="protein motif:ScanRegExp:IPR000577"
+ /inference="similar to AA sequence:REFSEQ:YP_153005.1"
+ /note="Converts glycerol and ADP to glycerol-3-phosphate
+ and ADP"
+ /codon_start=1
+ /transl_table=11
+ /product="glycerol kinase"
+ /protein_id="YP_001572528.1"
+ /db_xref="GI:161505416"
+ /db_xref="InterPro:IPR000577"
+ /db_xref="InterPro:IPR005999"
+ /translation="MTEKKYIVALDQGTTSSRAVVMDHDANIVSVSQREFEQIYPKPG
+ WVEHDPMEIWASQSSTLVEVLAKADISSDQIAAIGITNQRETAIVWERETGKPIYNAI
+ VWQCRRTADICEQLKRNGLEDYIRDNTGLVVDPYFSGTKVKWILDHVEGSRERAKRGE
+ LLFGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHDLDWDEKMLDVLDIPRAMLPQV
+ RKSSEVYGQTNIGGKGGTRIPIAGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNT
+ GEKAVKSENGLLTTIACGPSGEVNYALEGAVFMAGASIQWLRDEMKLISDAFDSEYFA
+ TKVKDTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNSNHIIRATLESIAYQTRDV
+ LEAMQADSGIRLHALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGL
+ AVGYWQNLDELQEKAVIEREFRPGIETTERNYRYSGWKKAVQRAMAWEEHDK"
+ misc_feature 3506156..3507649
+ /gene="glpK"
+ /locus_tag="SARI_03571"
+ /note="glycerol kinase; Provisional; Region: glpK;
+ PRK00047"
+ /db_xref="CDD:234594"
+ misc_feature 3506171..3507631
+ /gene="glpK"
+ /locus_tag="SARI_03571"
+ /note="Escherichia coli glycerol kinase-like proteins;
+ belongs to the FGGY family of carbohydrate kinases;
+ Region: FGGY_EcGK_like; cd07786"
+ /db_xref="CDD:198361"
+ misc_feature order(3506171..3506176,3506180..3506182,3506186..3506188,
+ 3506195..3506200,3506207..3506209,3506213..3506215,
+ 3506219..3506224,3506231..3506233,3506237..3506239,
+ 3506285..3506287,3506381..3506407,3506465..3506470,
+ 3506474..3506476,3506483..3506485,3506495..3506497,
+ 3506531..3506533,3506540..3506551,3506555..3506557,
+ 3506561..3506566,3506705..3506710,3506717..3506722,
+ 3506738..3506743,3506747..3506749,3506813..3506824,
+ 3506876..3506881,3506897..3506902,3506957..3506959,
+ 3506966..3506968,3506993..3506995,3506999..3507001,
+ 3507017..3507037,3507050..3507052,3507056..3507058,
+ 3507065..3507067,3507071..3507073,3507077..3507082,
+ 3507098..3507100,3507203..3507205,3507224..3507226,
+ 3507230..3507235,3507239..3507241,3507467..3507469,
+ 3507473..3507481,3507485..3507490,3507494..3507511,
+ 3507515..3507520)
+ /gene="glpK"
+ /locus_tag="SARI_03571"
+ /note="N- and C-terminal domain interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:198361"
+ misc_feature order(3506186..3506188,3506192..3506200,3506207..3506209,
+ 3506402..3506410,3506465..3506467,3506561..3506563,
+ 3506891..3506896,3506951..3506959,3506966..3506968,
+ 3507086..3507091,3507095..3507100,3507134..3507139,
+ 3507143..3507145,3507386..3507394,3507401..3507403)
+ /gene="glpK"
+ /locus_tag="SARI_03571"
+ /note="active site"
+ /db_xref="CDD:198361"
+ misc_feature order(3506186..3506188,3506192..3506200,3506207..3506209,
+ 3506951..3506959,3507086..3507091,3507095..3507100,
+ 3507134..3507139,3507143..3507145,3507386..3507394,
+ 3507401..3507403)
+ /gene="glpK"
+ /locus_tag="SARI_03571"
+ /note="MgATP binding site [chemical binding]; other site"
+ /db_xref="CDD:198361"
+ misc_feature order(3506186..3506188,3506195..3506197,3506891..3506893)
+ /gene="glpK"
+ /locus_tag="SARI_03571"
+ /note="catalytic site [active]"
+ /db_xref="CDD:198361"
+ misc_feature order(3506186..3506188,3506891..3506893)
+ /gene="glpK"
+ /locus_tag="SARI_03571"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:198361"
+ misc_feature order(3506195..3506197,3506402..3506410,3506465..3506467,
+ 3506561..3506563,3506891..3506896,3506966..3506968)
+ /gene="glpK"
+ /locus_tag="SARI_03571"
+ /note="glycerol binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:198361"
+ misc_feature order(3506255..3506257,3506306..3506308,3506315..3506320,
+ 3506330..3506332,3506339..3506344,3506441..3506443,
+ 3506672..3506674,3506681..3506683,3506840..3506845)
+ /gene="glpK"
+ /locus_tag="SARI_03571"
+ /note="homotetramer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:198361"
+ misc_feature order(3506273..3506275,3506282..3506284,3506291..3506293,
+ 3506468..3506470,3507080..3507082,3507089..3507091,
+ 3507098..3507103,3507110..3507112,3507179..3507181,
+ 3507185..3507187,3507200..3507202,3507239..3507265,
+ 3507275..3507277,3507284..3507286)
+ /gene="glpK"
+ /locus_tag="SARI_03571"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:198361"
+ misc_feature order(3506855..3506860,3506864..3506866)
+ /gene="glpK"
+ /locus_tag="SARI_03571"
+ /note="FBP binding site [chemical binding]; other site"
+ /db_xref="CDD:198361"
+ misc_feature order(3507362..3507364,3507368..3507370,3507572..3507574,
+ 3507578..3507580,3507584..3507595,3507599..3507601)
+ /gene="glpK"
+ /locus_tag="SARI_03571"
+ /note="protein IIAGlc interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:198361"
+ gene 3507776..3508786
+ /gene="glpX"
+ /locus_tag="SARI_03572"
+ CDS 3507776..3508786
+ /gene="glpX"
+ /locus_tag="SARI_03572"
+ /inference="protein motif:BlastProDom:IPR004464"
+ /inference="protein motif:HMMPfam:IPR004464"
+ /inference="protein motif:HMMPIR:IPR004464"
+ /inference="protein motif:HMMTigr:IPR004464"
+ /inference="similar to AA sequence:REFSEQ:NP_457967.1"
+ /note="'type II fructose 1,6-bisphosphatae; in Escherichia
+ coli this protein forms a dimer and binds manganese'"
+ /codon_start=1
+ /transl_table=11
+ /product="fructose 1,6-bisphosphatase II"
+ /protein_id="YP_001572529.1"
+ /db_xref="GI:161505417"
+ /db_xref="InterPro:IPR004464"
+ /translation="MRRELAIEFSRVTEAAALAGYKWLGRGDKNIADGAAVNAMRIML
+ NQVNIDGTIVIGEGEIDEAPMLYIGEKVGTGHGDAVDIAVDPIEGTRMTAMGQANALA
+ VLAVGDKGCFLNAPDMYMEKLIVGPGAKGAIDLNLPLADNLRNIADALGKPLGDLTVT
+ ILAKPRHDEVIAEMAKLGVRVFAIPDGDVAASILTCMPDSEVDVLYGIGGAPEGVVSA
+ AVIRALDGDMQGRLLARHDVKGDSEENRRIGEQELARCKAMGIEAGKALCLGDMARSD
+ NVIFSATGITKGDLLEGISRKGNIATTETLLIRGKSRTIRRIQSIHYLDRKDPDVQAH
+ IL"
+ misc_feature 3507782..3508741
+ /gene="glpX"
+ /locus_tag="SARI_03572"
+ /note="Bacterial fructose-1,6-bisphosphatase,
+ glpX-encoded; Region: FBPase_glpX; pfam03320"
+ /db_xref="CDD:217491"
+ misc_feature 3507782..3508741
+ /gene="glpX"
+ /locus_tag="SARI_03572"
+ /note="Bacterial fructose-1,6-bisphosphatase,
+ glpX-encoded. A dimeric enzyme dependent on Mg(2+).
+ glpX-encoded FPBase (FBPase class II) differs from other
+ members of the inositol-phosphatase superfamily by
+ permutation of secondary structure elements. The core...;
+ Region: FBPase_glpX; cd01516"
+ /db_xref="CDD:238774"
+ misc_feature order(3507872..3507874,3507941..3507946,3508028..3508042,
+ 3508337..3508339,3508412..3508414)
+ /gene="glpX"
+ /locus_tag="SARI_03572"
+ /note="putative active site [active]"
+ /db_xref="CDD:238774"
+ gene 3508883..3509629
+ /locus_tag="SARI_03573"
+ CDS 3508883..3509629
+ /locus_tag="SARI_03573"
+ /inference="protein motif:HMMPfam:IPR001433"
+ /inference="protein motif:HMMPfam:IPR008333"
+ /inference="protein motif:ScanRegExp:IPR010916"
+ /inference="similar to AA sequence:INSD:AAL22924.1"
+ /note="'KEGG: stm:STM4084 1.3e-129 fpr; ferredoxin-NADP
+ reductase K00528;
+ COG: COG1018 Flavodoxin reductases (ferredoxin-NADPH
+ reductases) family 1;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="ferredoxin-NADP reductase"
+ /protein_id="YP_001572530.1"
+ /db_xref="GI:161505418"
+ /db_xref="InterPro:IPR001433"
+ /db_xref="InterPro:IPR008333"
+ /db_xref="InterPro:IPR010916"
+ /translation="MADWVTGKVTKVQNWTDALFSLTVHAPINPFTAGQFTKLGLEID
+ GERVQRAYSYVNAPDNPNLEFYLVTVPQGKLSPRLAALKPGDEVQVVSDASGFFVLDE
+ VPDCETLWMLATGTAIGPYLSILQYGQDLARFKNLVLVHAARFAADLSYLPLMLELQK
+ RYAGKLHIQTVVSRESVPGSLTGRVPALIENGELEKAVGLPMDKETSHVMLCGNPQMV
+ RDTQQLLKETRQMTKHLRRRPGHMTAEHYW"
+ misc_feature 3508883..3509626
+ /locus_tag="SARI_03573"
+ /note="ferredoxin-NADP reductase; Provisional; Region:
+ PRK10926"
+ /db_xref="CDD:182844"
+ misc_feature 3508904..3509623
+ /locus_tag="SARI_03573"
+ /note="Ferredoxin-NADP+ (oxido)reductase is an
+ FAD-containing enzyme that catalyzes the reversible
+ electron transfer between NADP(H) and electron carrier
+ proteins such as ferredoxin and flavodoxin. Isoforms of
+ these flavoproteins (i.e. having a non-covalently...;
+ Region: FNR1; cd06195"
+ /db_xref="CDD:99792"
+ misc_feature order(3508988..3508990,3509030..3509041,3509078..3509080,
+ 3509084..3509086,3509090..3509092,3509099..3509101,
+ 3509105..3509110,3509228..3509230,3509621..3509623)
+ /locus_tag="SARI_03573"
+ /note="FAD binding pocket [chemical binding]; other site"
+ /db_xref="CDD:99792"
+ misc_feature order(3509030..3509032,3509036..3509041)
+ /locus_tag="SARI_03573"
+ /note="FAD binding motif [chemical binding]; other site"
+ /db_xref="CDD:99792"
+ misc_feature order(3509099..3509101,3509108..3509110,3509117..3509119,
+ 3509135..3509137,3509162..3509164,3509168..3509170)
+ /locus_tag="SARI_03573"
+ /note="phosphate binding motif [ion binding]; other site"
+ /db_xref="CDD:99792"
+ misc_feature order(3509213..3509215,3509225..3509236,3509240..3509242)
+ /locus_tag="SARI_03573"
+ /note="beta-alpha-beta structure motif; other site"
+ /db_xref="CDD:99792"
+ misc_feature order(3509228..3509233,3509306..3509314,3509519..3509524)
+ /locus_tag="SARI_03573"
+ /note="NAD binding pocket [chemical binding]; other site"
+ /db_xref="CDD:99792"
+ gene complement(3509751..3510179)
+ /locus_tag="SARI_03574"
+ CDS complement(3509751..3510179)
+ /locus_tag="SARI_03574"
+ /inference="protein motif:HMMPfam:IPR008523"
+ /inference="similar to AA sequence:INSD:AAO71042.1"
+ /note="'COG: COG3152 Predicted membrane protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572531.1"
+ /db_xref="GI:161505419"
+ /db_xref="InterPro:IPR008523"
+ /translation="MTIQQWLFSFKGRIGRRDFWIWIGLWFAGMLALFSLAGKNLLDI
+ QTAAFCLVCLLWPTAAVMVKRLHDRGRSGAWALLMILAWMLLAGNWVMLPGMWQWVVG
+ RFIPTLILVMTLIDLGAFVGVQGENKFGKATQDVKFKAEP"
+ misc_feature complement(3509763..3510179)
+ /locus_tag="SARI_03574"
+ /note="Predicted membrane protein [Function unknown];
+ Region: COG3152"
+ /db_xref="CDD:225694"
+ gene 3510280..3510876
+ /locus_tag="SARI_03575"
+ CDS 3510280..3510876
+ /locus_tag="SARI_03575"
+ /inference="protein motif:HMMPfam:IPR009918"
+ /inference="similar to AA sequence:INSD:AAL22922.1"
+ /note="'COG: NOG06218 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572532.1"
+ /db_xref="GI:161505420"
+ /db_xref="InterPro:IPR009918"
+ /translation="MKPGYTLFLLLFSVLTASITARAQLSSSTTTAPYLLAGSPTFDL
+ SISQFRENFNRQNPDLPLNEFRAIENSRDKANLTRAASKINENLYASTALERGTLKVK
+ SMQITWLPIQGPEQKAAKAKALEYMAAIIRTVAPLLTKEQSQKKLQKMLIAGKGKHYY
+ AETEGAVRYVVADNGEKGLTFAVEPIKLTLSENLEGAN"
+ misc_feature 3510280..3510873
+ /locus_tag="SARI_03575"
+ /note="Protein of unknown function (DUF1454); Region:
+ DUF1454; pfam07305"
+ /db_xref="CDD:148740"
+ gene 3511007..3511756
+ /gene="tpiA"
+ /locus_tag="SARI_03576"
+ CDS 3511007..3511756
+ /gene="tpiA"
+ /locus_tag="SARI_03576"
+ /inference="protein motif:BlastProDom:IPR000652"
+ /inference="protein motif:HMMPanther:IPR000652"
+ /inference="protein motif:HMMPfam:IPR000652"
+ /inference="protein motif:HMMTigr:IPR000652"
+ /inference="protein motif:ScanRegExp:IPR000652"
+ /inference="protein motif:superfamily:IPR000652"
+ /inference="similar to AA sequence:REFSEQ:YP_153001.1"
+ /note="Reversibly isomerizes the ketone sugar
+ dihydroxyacetone phosphate to the aldehyde sugar
+ glyceraldehyde-3-phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="triosephosphate isomerase"
+ /protein_id="YP_001572533.1"
+ /db_xref="GI:161505421"
+ /db_xref="InterPro:IPR000652"
+ /translation="MGNWKLNGSRHMVNELVANLRKELAGVAGCDVAIAPPEMYIDLA
+ KRAAAGSHIMLGAQNVDLNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDEL
+ IAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAY
+ EPVWAIGTGKSATPAQAQAVHKFIRDHIAKADAKIAEQVIIQYGGSVNASNAAELFAQ
+ PDIDGALVGGASLKADAFAVIVKAAEAAKQA"
+ misc_feature 3511007..3511699
+ /gene="tpiA"
+ /locus_tag="SARI_03576"
+ /note="triosephosphate isomerase; Provisional; Region:
+ PRK14567"
+ /db_xref="CDD:173031"
+ misc_feature 3511010..3511699
+ /gene="tpiA"
+ /locus_tag="SARI_03576"
+ /note="Triosephosphate isomerase (TIM) is a glycolytic
+ enzyme that catalyzes the interconversion of
+ dihydroxyacetone phosphate and
+ D-glyceraldehyde-3-phosphate. The reaction is very
+ efficient and requires neither cofactors nor metal ions.
+ TIM, usually...; Region: TIM; cd00311"
+ /db_xref="CDD:238190"
+ misc_feature order(3511013..3511015,3511019..3511021,3511271..3511273,
+ 3511487..3511489,3511505..3511507,3511622..3511624,
+ 3511679..3511681,3511685..3511690)
+ /gene="tpiA"
+ /locus_tag="SARI_03576"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:238190"
+ misc_feature order(3511013..3511015,3511022..3511024,3511118..3511126,
+ 3511130..3511132,3511139..3511141,3511178..3511180,
+ 3511232..3511234,3511241..3511246,3511277..3511282)
+ /gene="tpiA"
+ /locus_tag="SARI_03576"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238190"
+ misc_feature order(3511019..3511021,3511271..3511273,3511487..3511489)
+ /gene="tpiA"
+ /locus_tag="SARI_03576"
+ /note="catalytic triad [active]"
+ /db_xref="CDD:238190"
+ gene complement(3511798..3513270)
+ /locus_tag="SARI_03577"
+ CDS complement(3511798..3513270)
+ /locus_tag="SARI_03577"
+ /inference="protein motif:HMMPfam:IPR001898"
+ /inference="protein motif:HMMTigr:IPR001898"
+ /inference="protein motif:superfamily:IPR002888"
+ /inference="similar to AA sequence:INSD:EAV31068.1"
+ /note="'KEGG: ecj:JW3469 0.0040 arsB; arsenite/antimonite
+ transporter K03893;
+ COG: COG0471 Di- and tricarboxylate transporters;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572534.1"
+ /db_xref="GI:161505422"
+ /db_xref="InterPro:IPR001898"
+ /db_xref="InterPro:IPR002888"
+ /translation="MDRLTPIRCWPAIISLVITLTIWFVIPCPADVTPQAWQLLALFI
+ GTIAAIIGKAMPIGAIAIVAIMLVAMTGVTHPGKPSAALNDALSGFSNQLIWLIGLSI
+ MLSQSLLKTGLGARIGYGFIALFGKRTLGIAWALTLAETLIAPVTPSNTARGGGIIHP
+ VMRAIAESLGSQPGNCENGSTGRYLALVNYNINPISSAMFVTATAPNPLIVSFLTKGT
+ DGVLNMTWGMWAIAALLPAIISLVVMPIVIWWLYPPAVTRTPDAPQFARQKLNALGPL
+ SLAEKITLAVFILLLCLWAGVPAMLMGSGWTVNPTSAALIGLSILLLTGVLSWDDILK
+ CRGAWDTIVWFAALVMMADFLSKLGLVGWLATSVGSAINHLGVHWSIATLLLILLYVY
+ SHYFFASTTAHITAMFAAFFAAGLGLGAPPALLGLMLGFSSSLMMSLTHYGTGTAPII
+ FGSGYVTLAEWWKTGLVMSVVNLTIWGVTGAFWWHWLGYW"
+ misc_feature complement(3511801..3513243)
+ /locus_tag="SARI_03577"
+ /note="Anion permease ArsB/NhaD. These permeases have
+ been shown to translocate sodium, arsenate, antimonite,
+ sulfate and organic anions across biological membranes in
+ all three kingdoms of life. A typical anion permease
+ contains 8-13 transmembrane helices...; Region:
+ ArsB_NhaD_permease; cl17221"
+ /db_xref="CDD:247775"
+ misc_feature complement(3511804..3513243)
+ /locus_tag="SARI_03577"
+ /note="Di- and tricarboxylate transporters [Inorganic ion
+ transport and metabolism]; Region: CitT; COG0471"
+ /db_xref="CDD:223547"
+ misc_feature complement(order(3512074..3512112,3512206..3512262,
+ 3512302..3512319,3512347..3512373,3512395..3512433,
+ 3512521..3512559,3512587..3512592,3512653..3512688,
+ 3512692..3512724,3512749..3512751,3512764..3512817,
+ 3512821..3512850,3512854..3512874,3512944..3512997))
+ /locus_tag="SARI_03577"
+ /note="transmembrane helices; other site"
+ /db_xref="CDD:238344"
+ gene complement(3513384..3514688)
+ /locus_tag="SARI_03578"
+ CDS complement(3513384..3514688)
+ /locus_tag="SARI_03578"
+ /inference="protein motif:HMMPfam:IPR004680"
+ /inference="similar to AA sequence:INSD:ABP62708.1"
+ /note="'COG: COG0471 Di- and tricarboxylate transporters;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572535.1"
+ /db_xref="GI:161505423"
+ /db_xref="InterPro:IPR004680"
+ /translation="MSLWLSHPLFLPSLVVGITVLLWATSLLPEFITALLFFTVAMAA
+ KIAPPDMIFGGFASSAFWLVFSGFVLGIAIRKTGLADRAARALSAKLTDSWLLMVSSV
+ VLLSYALAFVMPSNMGRIALLMPIVAAMAKRAGIADGTRAWYGLALAVGFGTFQLSAT
+ ILPANVPNLVMSGAAEGSYGIHLNYVPYLLLHTPILAWLKGAVLIALICWLFPGAPCT
+ PREAEASAPMSRNEKRLAWMLTVVLTMWVTESWHGIGPAWTGLAAAVVTMLPRIGFIS
+ GDEFASGINIRACIYVAGILGLALTVTQTGIGNAVGETLLHVMPLDTQKPFTSFLALT
+ GITTALNFIMTANGVPALYTTLAESFAAATGFPLLSVIMIQVLGYSTPILPYQASPIV
+ VAMALGKVPAKAGMLLCLALAAVTYLVLLPLDYAWFRVLGKL"
+ misc_feature complement(3513480..3514634)
+ /locus_tag="SARI_03578"
+ /note="Anion permease ArsB/NhaD. These permeases have
+ been shown to translocate sodium, arsenate, antimonite,
+ sulfate and organic anions across biological membranes in
+ all three kingdoms of life. A typical anion permease
+ contains 8-13 transmembrane helices...; Region:
+ ArsB_NhaD_permease; cl17221"
+ /db_xref="CDD:247775"
+ misc_feature complement(3513489..3514634)
+ /locus_tag="SARI_03578"
+ /note="Di- and tricarboxylate transporters [Inorganic ion
+ transport and metabolism]; Region: CitT; COG0471"
+ /db_xref="CDD:223547"
+ misc_feature complement(order(3513546..3513605,3513657..3513704,
+ 3513783..3513839,3513882..3513926,3513948..3513977,
+ 3514044..3514052,3514065..3514085,3514101..3514124,
+ 3514188..3514217,3514230..3514271,3514284..3514337,
+ 3514341..3514346,3514350..3514394,3514464..3514517,
+ 3514560..3514601,3514620..3514631))
+ /locus_tag="SARI_03578"
+ /note="transmembrane helices; other site"
+ /db_xref="CDD:238344"
+ gene complement(3514761..3515510)
+ /locus_tag="SARI_03579"
+ CDS complement(3514761..3515510)
+ /locus_tag="SARI_03579"
+ /inference="protein motif:HMMPfam:IPR003763"
+ /inference="protein motif:HMMPIR:IPR003763"
+ /inference="protein motif:HMMTigr:IPR003763"
+ /inference="similar to AA sequence:REFSEQ:NP_462945.1"
+ /note="'KEGG: sec:SC3955 9.3e-129 ushB; CDP-diacylglycerol
+ phosphotidylhydrolase K01521;
+ COG: COG2134 CDP-diacylglycerol pyrophosphatase;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="CDP-diacylglycerol pyrophosphatase"
+ /protein_id="YP_001572536.1"
+ /db_xref="GI:161505424"
+ /db_xref="InterPro:IPR003763"
+ /translation="MKKTGYFLLAVIVIVAAAGVGYWKFSGNPDALREIVLEQCLPDQ
+ LQHQNPAPCAEVKPRAGYVVFKDRHGPLQYLLMPTYRINGTESPLLLEPATPNFFWLA
+ WQARDYMSKKYGHDIPDSAVSLTVNSRLGRSQDHLHIHISCIRPDVREQLDNDLTRIS
+ TRWLPLPGGLMGHEYLARRVTESELAQRSPFMMLAEEVPEARDHMGRYGLAVVRQSDG
+ SFVLLATQRNLLTLNRASAEEIQDHQCDILK"
+ misc_feature complement(3514764..3515510)
+ /locus_tag="SARI_03579"
+ /note="CDP-diacylglycerol pyrophosphatase, bacterial type;
+ Region: cdh; TIGR00672"
+ /db_xref="CDD:129755"
+ gene complement(3515611..3516600)
+ /locus_tag="SARI_03580"
+ CDS complement(3515611..3516600)
+ /locus_tag="SARI_03580"
+ /inference="protein motif:HMMPfam:IPR006059"
+ /inference="protein motif:HMMTigr:IPR005669"
+ /inference="protein motif:ScanRegExp:IPR000957"
+ /inference="similar to AA sequence:REFSEQ:YP_152984.1"
+ /note="'COG: COG1613 ABC-type sulfate transport system,
+ periplasmic component;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="sulfate transporter subunit"
+ /protein_id="YP_001572537.1"
+ /db_xref="GI:161505425"
+ /db_xref="InterPro:IPR000957"
+ /db_xref="InterPro:IPR005669"
+ /db_xref="InterPro:IPR006059"
+ /translation="MKKWGVGFTLLLASTSVLAKDIQLLNVSYDPTRELYEQYNKAFS
+ AHWKQETGDNVIIRQSHGGSGKQATSVINGIDADVVTLALAWDVDAIAERGRIDKAWI
+ KRLPDNSAPYTSTIVFLVRKGNPKQIHDWNDLIKPGVSVITPNPKSSGGARWNYLAAW
+ GYALHYNNNDPAEAQAFVKALFKNVEVLDSGARGSTNTFVERGIGDVLIAWENEALLA
+ THELGKDKFEIITPSESILAEPTVSVVDKVVEKKGTNAVAEAYLKYLYSPEGQAIAAK
+ NYYRPRNADVAKKYKDAFPKLKLFTIDEVFGGWAKAQKDHFANGGTFDQISKR"
+ misc_feature complement(3515761..3516468)
+ /locus_tag="SARI_03580"
+ /note="Bacterial extracellular solute-binding protein;
+ Region: SBP_bac_11; pfam13531"
+ /db_xref="CDD:222203"
+ misc_feature complement(3515761..>3516273)
+ /locus_tag="SARI_03580"
+ /note="Bacterial periplasmic transport systems use
+ membrane-bound complexes and substrate-bound,
+ membrane-associated, periplasmic binding proteins (PBPs)
+ to transport a wide variety of substrates, such as, amino
+ acids, peptides, sugars, vitamins and inorganic...;
+ Region: PBPb; cd00134"
+ /db_xref="CDD:238078"
+ misc_feature complement(order(3515989..3515991,3516007..3516009,
+ 3516085..3516087))
+ /locus_tag="SARI_03580"
+ /note="membrane-bound complex binding site; other site"
+ /db_xref="CDD:238078"
+ misc_feature complement(3515869..3515886)
+ /locus_tag="SARI_03580"
+ /note="hinge residues; other site"
+ /db_xref="CDD:238078"
+ gene complement(3516764..3517726)
+ /locus_tag="SARI_03581"
+ CDS complement(3516764..3517726)
+ /locus_tag="SARI_03581"
+ /inference="protein motif:BlastProDom:IPR000023"
+ /inference="protein motif:HMMPanther:IPR000023"
+ /inference="protein motif:HMMPfam:IPR000023"
+ /inference="protein motif:HMMPIR:IPR012003"
+ /inference="protein motif:HMMTigr:IPR012828"
+ /inference="protein motif:ScanRegExp:IPR000023"
+ /inference="similar to AA sequence:INSD:AAX67859.1"
+ /note="'catalyzes the formation of D-fructose
+ 1,6-bisphosphate from D-fructose 6-phosphate in
+ glycolysis'"
+ /codon_start=1
+ /transl_table=11
+ /product="6-phosphofructokinase"
+ /protein_id="YP_001572538.1"
+ /db_xref="GI:161505426"
+ /db_xref="InterPro:IPR000023"
+ /db_xref="InterPro:IPR012003"
+ /db_xref="InterPro:IPR012828"
+ /translation="MIKKIGVLTSGGDAPGMNAAIRGVVRAALTEGLEVMGIYDGYLG
+ LYEDRMVQLDRYSVSDMINRGGTFLGSARFPEFRDENIRAVAIENLKKRGIDALVVIG
+ GDGSYMGAKRLTEMGFPCIGLPGTIDNDIKGTDYTIGYFTALGTVVEAIDRLRDTSSS
+ HQRISIVEVMGRYCGDLTLAAAIAGGCEFIVVPEVEFNREDLVAEIKAGIAKGKKHAI
+ VAITEHMCDVDELAHFIEKETGRETRATVLGHIQRGGSPVPYDRILASRMGAYAIDLL
+ LEGHGGRCVGIQNEQLVHHDIIDAIENMKRPFKSDWMECAKKLY"
+ misc_feature complement(3516767..3517720)
+ /locus_tag="SARI_03581"
+ /note="Phosphofructokinase, a key regulatory enzyme in
+ glycolysis, catalyzes the phosphorylation of
+ fructose-6-phosphate to fructose-1,6-biphosphate. The
+ members belong to a subfamily of the PFKA family (cd00363)
+ and include bacterial ATP-dependent...; Region:
+ Bacterial_PFK; cd00763"
+ /db_xref="CDD:238388"
+ misc_feature complement(3516824..3517717)
+ /locus_tag="SARI_03581"
+ /note="6-phosphofructokinase; Region: PFKA_ATP; TIGR02482"
+ /db_xref="CDD:213713"
+ misc_feature complement(order(3516968..3516970,3516977..3516979,
+ 3517058..3517060,3517211..3517219,3517337..3517339,
+ 3517343..3517345,3517349..3517351,3517400..3517405,
+ 3517409..3517417,3517508..3517510,3517601..3517603,
+ 3517691..3517693))
+ /locus_tag="SARI_03581"
+ /note="active site"
+ /db_xref="CDD:238388"
+ misc_feature complement(order(3517400..3517405,3517409..3517417,
+ 3517508..3517510,3517601..3517603,3517691..3517693))
+ /locus_tag="SARI_03581"
+ /note="ADP/pyrophosphate binding site [chemical binding];
+ other site"
+ /db_xref="CDD:238388"
+ misc_feature complement(order(3516767..3516775,3516860..3516862,
+ 3516905..3516907,3516926..3516928,3516938..3516943,
+ 3517085..3517087,3517169..3517171,3517175..3517180,
+ 3517262..3517264,3517271..3517273,3517283..3517285,
+ 3517319..3517321,3517538..3517540,3517547..3517549,
+ 3517562..3517564,3517649..3517651,3517661..3517663))
+ /locus_tag="SARI_03581"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238388"
+ misc_feature complement(order(3517079..3517087,3517091..3517093,
+ 3517163..3517165,3517169..3517171,3517262..3517264,
+ 3517547..3517552,3517559..3517564,3517649..3517651,
+ 3517661..3517663))
+ /locus_tag="SARI_03581"
+ /note="allosteric effector site; other site"
+ /db_xref="CDD:238388"
+ misc_feature complement(order(3516968..3516970,3516977..3516979,
+ 3516995..3516997,3517058..3517060,3517211..3517219,
+ 3517238..3517240,3517337..3517339,3517343..3517345,
+ 3517349..3517351))
+ /locus_tag="SARI_03581"
+ /note="fructose-1,6-bisphosphate binding site; other site"
+ /db_xref="CDD:238388"
+ gene complement(3517911..3518813)
+ /gene="fieF"
+ /locus_tag="SARI_03582"
+ CDS complement(3517911..3518813)
+ /gene="fieF"
+ /locus_tag="SARI_03582"
+ /inference="protein motif:HMMPanther:IPR002524"
+ /inference="protein motif:HMMPfam:IPR002524"
+ /inference="protein motif:HMMTigr:IPR002524"
+ /inference="similar to AA sequence:SwissProt:Q8ZKR4"
+ /note="'member of cation diffusion facilitator family;
+ CDF; membrane-bound; induced by both zinc and iron, but
+ does not induce resistance to zinc; can transport zinc(II)
+ in a proton-dependent manner; instead this protein induces
+ iron resistance; forms dimers'"
+ /codon_start=1
+ /transl_table=11
+ /product="ferrous iron efflux protein F"
+ /protein_id="YP_001572539.1"
+ /db_xref="GI:161505427"
+ /db_xref="InterPro:IPR002524"
+ /translation="MNQTYGRLVSRAAIAATAMALALLLIKIFAWWYTGSVSILAALV
+ DSLVDIAASLTNLLVVRYSLQPADDEHTFGHGKAESLAALAQSMFISGSALFLFLTSI
+ QNLIKPTPMNDPGVGIGVTVIALICTIILVTFQRWVVRKTQSQAVRADMLHYQSDVMM
+ NGAILIALGLSWYGWHRADALFALGIGIYILYSALRMGYEAVQSLLDRALPDAERQEI
+ IDIVTSWPGVSGAHDLRTRQSGPTRFIQIHLEMEDNLPLVQAHLVAEQVEQAILRRFP
+ GSDVIIHQDPCSVVPREIKKFELV"
+ misc_feature complement(3517917..3518813)
+ /gene="fieF"
+ /locus_tag="SARI_03582"
+ /note="ferrous iron efflux protein F; Reviewed; Region:
+ fieF; PRK09509"
+ /db_xref="CDD:181919"
+ misc_feature complement(3517920..3518813)
+ /gene="fieF"
+ /locus_tag="SARI_03582"
+ /note="Predicted Co/Zn/Cd cation transporters [Inorganic
+ ion transport and metabolism]; Region: MMT1; COG0053"
+ /db_xref="CDD:223131"
+ gene complement(3519174..3519926)
+ /locus_tag="SARI_03583"
+ CDS complement(3519174..3519926)
+ /locus_tag="SARI_03583"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572540.1"
+ /db_xref="GI:161505428"
+ /translation="MLNIRAFTYFSRTRQSYNLIDKNSASLGTNLAERVNLCSYRNIK
+ EECHEVNINFMLSTQQCDELTKLGCYNSQDVVRDLCNICTSLANKLIIQATAVSHLYK
+ EANIRIEQDIDSYVASRINAVLDDVRNEKQKNIPSKVRAELVRTAMVKGGYEKIVEGK
+ SDEKLLSFARPGLTAEVNTLADQMLPLNARVVNYLNKAIKPLICDQTYDAIVSHPEIN
+ QRHLQQEHYMPVLDILNIARLQAEDWLEEGRE"
+ gene complement(3520294..3520794)
+ /gene="cpxP"
+ /locus_tag="SARI_03584"
+ CDS complement(3520294..3520794)
+ /gene="cpxP"
+ /locus_tag="SARI_03584"
+ /inference="protein motif:HMMPfam:IPR012899"
+ /inference="similar to AA sequence:INSD:AAV79669.1"
+ /note="repressor of the Cpx envelope stress response
+ pathway which occurs via periplasmic interactions with
+ CpxA; CpxP is degraded by DegP protease especially in the
+ presence of misfolded substrates"
+ /codon_start=1
+ /transl_table=11
+ /product="periplasmic repressor CpxP"
+ /protein_id="YP_001572541.1"
+ /db_xref="GI:161505429"
+ /db_xref="InterPro:IPR012899"
+ /translation="MRKVTAAVMASTLAFSSLSHAAEVITSDNWHSGDGATQRSAQNH
+ MFDGISLTEHQRQQMRDLMQRARHEQPPVNVSEMETMHRLVTAEKFDESAVRVQAEKM
+ AQEQVARQVEMARVRNQMYRLLTPEQQAVLNEKHQQRMEQLRDVAQWQKSSSLKLLSS
+ SNSRSQ"
+ misc_feature complement(3520375..3520653)
+ /gene="cpxP"
+ /locus_tag="SARI_03584"
+ /note="CpxP component of the bacterial Cpx-two-component
+ system and related proteins; Region: CpxP_like; cd09916"
+ /db_xref="CDD:197366"
+ misc_feature complement(order(3520387..3520389,3520396..3520401,
+ 3520432..3520434,3520441..3520443,3520450..3520455,
+ 3520462..3520464,3520474..3520476,3520486..3520488,
+ 3520498..3520500,3520507..3520509,3520519..3520521,
+ 3520525..3520527,3520537..3520542,3520549..3520551,
+ 3520561..3520563))
+ /gene="cpxP"
+ /locus_tag="SARI_03584"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:197366"
+ gene 3520945..3521643
+ /locus_tag="SARI_03585"
+ CDS 3520945..3521643
+ /locus_tag="SARI_03585"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:BlastProDom:IPR001867"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR001789"
+ /inference="protein motif:HMMPfam:IPR001867"
+ /inference="protein motif:HMMSmart:IPR001789"
+ /inference="protein motif:superfamily:IPR011006"
+ /inference="similar to AA sequence:REFSEQ:YP_152980.1"
+ /note="response regulator in two-component regulatory
+ system with CpxA; part of the envelope stress response
+ system"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional regulator CpxR"
+ /protein_id="YP_001572542.1"
+ /db_xref="GI:161505430"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR001867"
+ /db_xref="InterPro:IPR011006"
+ /db_xref="InterPro:IPR011991"
+ /translation="MNKILLVDDDRELTSLLKELLEMEGFNVLVAHDGEQALELLDDS
+ IDLLLLDVMMPKKNGIDTLKALRQTHQTPVIMLTARGSELDRVLGLELGADDYLPKPF
+ NDRELVARIRAILRRSHWSEQQQSSDNGSPTLEVDALSLNPGRQEASFDGQTLELTGT
+ EFTLLYLLAQHLGQVVSREHLSQEVLGKRLTPFDRAIDMHISNLRRKLPERKDGHPWF
+ KTLRGRGYLMVSAS"
+ misc_feature 3520945..3521640
+ /locus_tag="SARI_03585"
+ /note="DNA-binding transcriptional regulator CpxR;
+ Provisional; Region: PRK10955"
+ /db_xref="CDD:182864"
+ misc_feature 3520957..3521289
+ /locus_tag="SARI_03585"
+ /note="Signal receiver domain; originally thought to be
+ unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
+ recently identified in eukaroytes ETR1 Arabidopsis
+ thaliana; this domain receives the signal from the sensor
+ partner in a two-component systems; Region: REC; cd00156"
+ /db_xref="CDD:238088"
+ misc_feature order(3520966..3520971,3521119..3521121,3521176..3521178,
+ 3521233..3521235,3521242..3521247)
+ /locus_tag="SARI_03585"
+ /note="active site"
+ /db_xref="CDD:238088"
+ misc_feature order(3521104..3521109,3521113..3521121)
+ /locus_tag="SARI_03585"
+ /note="intermolecular recognition site; other site"
+ /db_xref="CDD:238088"
+ misc_feature 3521242..3521250
+ /locus_tag="SARI_03585"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238088"
+ misc_feature 3521344..3521628
+ /locus_tag="SARI_03585"
+ /note="Effector domain of response regulator. Bacteria and
+ certain eukaryotes like protozoa and higher plants use
+ two-component signal transduction systems to detect and
+ respond to changes in the environment. The system consists
+ of a sensor histidine kinase and...; Region: trans_reg_C;
+ cd00383"
+ /db_xref="CDD:238225"
+ misc_feature order(3521416..3521418,3521473..3521478,3521530..3521532,
+ 3521539..3521541,3521563..3521568,3521602..3521604,
+ 3521617..3521619)
+ /locus_tag="SARI_03585"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:238225"
+ gene 3521640..3523013
+ /gene="cpxA"
+ /locus_tag="SARI_03586"
+ CDS 3521640..3523013
+ /gene="cpxA"
+ /locus_tag="SARI_03586"
+ /inference="protein motif:Gene3D:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003660"
+ /inference="protein motif:HMMPfam:IPR003661"
+ /inference="protein motif:HMMSmart:IPR003594"
+ /inference="protein motif:HMMSmart:IPR003660"
+ /inference="protein motif:HMMSmart:IPR003661"
+ /inference="protein motif:superfamily:IPR003594"
+ /inference="protein motif:superfamily:IPR009082"
+ /inference="similar to AA sequence:INSD:CAD09566.1"
+ /note="part of two-component CpxA/CpxR system; senses
+ envelope stress; upregulates a number of periplasmic
+ folding and trafficking factors"
+ /codon_start=1
+ /transl_table=11
+ /product="two-component sensor protein"
+ /protein_id="YP_001572543.1"
+ /db_xref="GI:161505431"
+ /db_xref="InterPro:IPR003594"
+ /db_xref="InterPro:IPR003660"
+ /db_xref="InterPro:IPR003661"
+ /db_xref="InterPro:IPR009082"
+ /translation="MIGSLTARIFAIFWLTLALVLMLVLMLPKLDSRQMTELMDSEQR
+ QGLMIEQHVEAELANDPPNDLMWWRRLFRAIDKWAPPGQRLLLVTSEGRVIGAERSEM
+ QIIRNFIGQADNADHPQKKKYGRVEMVGPFSVRDGEDNYQLYLIRPASSSQSDFINLL
+ FDRPLLLLIVTMLVSSPLLLWLAWSLAKPARKLKNAADEVAQGNLRQHPELEAGPQEF
+ LAAGASFNQMVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGESKELER
+ IETEAQRLDSMINDLLVMSRNQQKNALVSETMKANQLWGEVLDNAAFEAEQMGKSLTV
+ NYPPGPWPLYGNPNALESALENIVRNALRYSHTKIEVGFSVDKDGITITVDDDGPGVS
+ PEDREQIFRPFYRTDEARDRESGGTGLGLAIVETAIQQHRGWVKADDSPLGGLRLVIW
+ LPLYKRS"
+ misc_feature 3521640..3523010
+ /gene="cpxA"
+ /locus_tag="SARI_03586"
+ /note="two-component sensor protein; Provisional; Region:
+ cpxA; PRK09470"
+ /db_xref="CDD:236532"
+ misc_feature 3522210..3522341
+ /gene="cpxA"
+ /locus_tag="SARI_03586"
+ /note="Histidine kinase, Adenylyl cyclase,
+ Methyl-accepting protein, and Phosphatase (HAMP) domain.
+ HAMP is a signaling domain which occurs in a wide variety
+ of signaling proteins, many of which are bacterial. The
+ HAMP domain consists of two alpha helices...; Region:
+ HAMP; cd06225"
+ /db_xref="CDD:100122"
+ misc_feature order(3522210..3522212,3522216..3522221,3522228..3522233,
+ 3522237..3522239,3522288..3522293,3522297..3522302,
+ 3522309..3522314,3522318..3522323,3522330..3522335)
+ /gene="cpxA"
+ /locus_tag="SARI_03586"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:100122"
+ misc_feature 3522345..3522527
+ /gene="cpxA"
+ /locus_tag="SARI_03586"
+ /note="Histidine Kinase A (dimerization/phosphoacceptor)
+ domain; Histidine Kinase A dimers are formed through
+ parallel association of 2 domains creating 4-helix
+ bundles; usually these domains contain a conserved His
+ residue and are activated via...; Region: HisKA; cd00082"
+ /db_xref="CDD:119399"
+ misc_feature order(3522363..3522365,3522375..3522377,3522387..3522389,
+ 3522396..3522398,3522408..3522410,3522417..3522419,
+ 3522468..3522470,3522477..3522479,3522489..3522491,
+ 3522498..3522500,3522510..3522512)
+ /gene="cpxA"
+ /locus_tag="SARI_03586"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119399"
+ misc_feature 3522381..3522383
+ /gene="cpxA"
+ /locus_tag="SARI_03586"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:119399"
+ misc_feature 3522687..3522992
+ /gene="cpxA"
+ /locus_tag="SARI_03586"
+ /note="Histidine kinase-like ATPases; This family includes
+ several ATP-binding proteins for example: histidine
+ kinase, DNA gyrase B, topoisomerases, heat shock protein
+ HSP90, phytochrome-like ATPases and DNA mismatch repair
+ proteins; Region: HATPase_c; cd00075"
+ /db_xref="CDD:238030"
+ misc_feature order(3522705..3522707,3522717..3522719,3522726..3522728,
+ 3522789..3522791,3522795..3522797,3522801..3522803,
+ 3522807..3522812,3522891..3522902,3522948..3522950,
+ 3522954..3522956,3522969..3522974,3522978..3522980)
+ /gene="cpxA"
+ /locus_tag="SARI_03586"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature 3522717..3522719
+ /gene="cpxA"
+ /locus_tag="SARI_03586"
+ /note="Mg2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature order(3522801..3522803,3522807..3522809,3522891..3522893,
+ 3522897..3522899)
+ /gene="cpxA"
+ /locus_tag="SARI_03586"
+ /note="G-X-G motif; other site"
+ /db_xref="CDD:238030"
+ unsure 3522490..3522558
+ /gene="cpxA"
+ /locus_tag="SARI_03586"
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(3523113..3523784)
+ /locus_tag="SARI_03587"
+ CDS complement(3523113..3523784)
+ /locus_tag="SARI_03587"
+ /inference="protein motif:HMMPfam:IPR005163"
+ /inference="protein motif:HMMPfam:IPR005302"
+ /inference="similar to AA sequence:REFSEQ:YP_543437.1"
+ /note="'COG: COG2258 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572544.1"
+ /db_xref="GI:161505432"
+ /db_xref="InterPro:IPR005163"
+ /db_xref="InterPro:IPR005302"
+ /translation="MHYPVEVFTGKIQDYAGSRPSAIAKVQVDGELMLTDLGLEGDEQ
+ AEKKIHGGPDRALCHYPREHYRYWAQAFPELAERFVAPAFGENLSTDGLTEQNVYIGD
+ IFRWGETLIQVTQPRSPCFKLNYHFAISDMASQMQNVGKTGWLYSVIAPGRVAADAPL
+ ELVSRVSDVSVQEAIAIAWHMPFDDEQYHRLLSAAGLSKSWTRTMQKRRLSGRIENQS
+ RRLRG"
+ misc_feature complement(3523116..3523784)
+ /locus_tag="SARI_03587"
+ /note="6-N-hydroxylaminopurine resistance protein;
+ Provisional; Region: PRK11536"
+ /db_xref="CDD:183182"
+ misc_feature complement(3523299..3523676)
+ /locus_tag="SARI_03587"
+ /note="MOSC domain; Region: MOSC; pfam03473"
+ /db_xref="CDD:217583"
+ misc_feature complement(3523143..3523283)
+ /locus_tag="SARI_03587"
+ /note="3-alpha domain; Region: 3-alpha; pfam03475"
+ /db_xref="CDD:202656"
+ unsure 3523674..3523803
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(3523854..3524486)
+ /locus_tag="SARI_03588"
+ CDS complement(3523854..3524486)
+ /locus_tag="SARI_03588"
+ /inference="protein motif:BlastProDom:IPR001189"
+ /inference="protein motif:FPrintScan:IPR001189"
+ /inference="protein motif:Gene3D:IPR001189"
+ /inference="protein motif:HMMPanther:IPR001189"
+ /inference="protein motif:HMMPfam:IPR001189"
+ /inference="protein motif:ScanRegExp:IPR001189"
+ /inference="protein motif:superfamily:IPR001189"
+ /inference="similar to AA sequence:REFSEQ:NP_312861.2"
+ /note="SodA; manganese binding; only present under aerobic
+ conditions; destroys free radicals"
+ /codon_start=1
+ /transl_table=11
+ /product="superoxide dismutase"
+ /protein_id="YP_001572545.1"
+ /db_xref="GI:161505433"
+ /db_xref="InterPro:IPR001189"
+ /translation="MEMIMSYTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNAN
+ AALESLPEFANLPVEELITKLDQVPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGD
+ LKAAIERDFGSVEKFKEEFEKAAASRFGSGWAWLVLKGDKLSVVSTANQDSPLMGEVI
+ SGASGFPILGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAAARFAAKK"
+ misc_feature complement(3523857..3524474)
+ /locus_tag="SARI_03588"
+ /note="superoxide dismutase; Provisional; Region:
+ PRK10925"
+ /db_xref="CDD:182843"
+ misc_feature complement(3524205..3524471)
+ /locus_tag="SARI_03588"
+ /note="Iron/manganese superoxide dismutases, alpha-hairpin
+ domain; Region: Sod_Fe_N; pfam00081"
+ /db_xref="CDD:200985"
+ misc_feature complement(3523869..3524186)
+ /locus_tag="SARI_03588"
+ /note="Iron/manganese superoxide dismutases, C-terminal
+ domain; Region: Sod_Fe_C; pfam02777"
+ /db_xref="CDD:202388"
+ gene complement(3524543..3524734)
+ /locus_tag="SARI_03589"
+ CDS complement(3524543..3524734)
+ /locus_tag="SARI_03589"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572546.1"
+ /db_xref="GI:161505434"
+ /translation="MLPLTKPGTKRNILKPCLTFICFRDLLTDGFGGVRKKRLFLSGS
+ RSAYNPEQSTALIIIFNII"
+ gene 3524803..3525656
+ /locus_tag="SARI_03590"
+ /note="Pseudogene compared to gi|16767320|ref|NP_462935.1|
+ putative periplasmic dicarboxylate-binding protein
+ [Salmonella typhimurium LT2]"
+ gene 3525750..3526263
+ /locus_tag="SARI_03591"
+ /note="Pseudogene compared to gi|16767319|ref|NP_462934.1|
+ putative C4-dicarboxylate transport system [Salmonella
+ typhimurium LT2]"
+ gene 3526259..3527564
+ /locus_tag="SARI_03592"
+ /note="Pseudogene compared to gi|16767318|ref|NP_462933.1|
+ putative C4-dicarboxylate transport system [Salmonella
+ typhimurium LT2]"
+ gene complement(3527640..3527957)
+ /locus_tag="SARI_03593"
+ CDS complement(3527640..3527957)
+ /locus_tag="SARI_03593"
+ /inference="protein motif:HMMPfam:IPR009331"
+ /inference="similar to AA sequence:INSD:AAL22891.1"
+ /note="'COG: NOG25848 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572547.1"
+ /db_xref="GI:161505435"
+ /db_xref="InterPro:IPR009331"
+ /translation="MGSIMRKTLFLLLPLIVTNAHAVYVGVRHEYLDDSKANYDRAYI
+ AHRFANGFGFAIEAISKSGGDDTNKAFNDLETQGNEYTISYQFKTGDVVWQPDFFTWR
+ AFL"
+ misc_feature complement(<3527664..3527912)
+ /locus_tag="SARI_03593"
+ /note="Oligogalacturonate-specific porin protein (KdgM);
+ Region: KdgM; cl11629"
+ /db_xref="CDD:245728"
+ gene complement(3527991..3528173)
+ /locus_tag="SARI_03594"
+ CDS complement(3527991..3528173)
+ /locus_tag="SARI_03594"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572548.1"
+ /db_xref="GI:161505436"
+ /translation="MKYNYKETPILTVLMVFLFLLYFANINFIYFILLFEHCPNFKLK
+ RVAYVVAIHIAYYGCN"
+ gene complement(3528245..3529276)
+ /locus_tag="SARI_03595"
+ CDS complement(3528245..3529276)
+ /locus_tag="SARI_03595"
+ /inference="protein motif:HMMPfam:IPR001584"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:REFSEQ:ZP_00923070.1"
+ /note="'KEGG: nha:Nham_4600 1.1e-09 feruloyl esterase;
+ COG: COG3335 Transposase and inactivated derivatives;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572549.1"
+ /db_xref="GI:161505437"
+ /db_xref="InterPro:IPR001584"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012337"
+ /translation="MPIIAPIPRDERRLMQKAIHKTHDKNYARRLTAMLMLHRGDRVS
+ DVARTLCCARSSVGRWINWFTLSGVAGLKSLPAGRTRRWPFEHICTLLRELVKHAPGD
+ FGYQRSRWSTELLAIKINEITGCQLHAGTVRRWLPSAGLVWRRAAPTLRIRDPHKDEK
+ MAAIHKALDECSAEHPVFYEDEVDIHLNPKIGADWQLRGQQKRVVTPGQNEKYYLAGA
+ LHSGTGKVSYVGGNSKSSALFISLLKRLKATYRRAKTITLIVDNYIIHKSRETQRWLK
+ ENPKFRVIYQPVYSPWVNHVERLWQALHDTITRNHQCRSMWQLLKKVRHFMETVSPFP
+ GGKHGLAKV"
+ misc_feature complement(3529058..3529207)
+ /locus_tag="SARI_03595"
+ /note="Homeodomain-like domain; Region: HTH_23; pfam13384"
+ /db_xref="CDD:222091"
+ misc_feature complement(3528869..3529189)
+ /locus_tag="SARI_03595"
+ /note="Winged helix-turn helix; Region: HTH_29; pfam13551"
+ /db_xref="CDD:222216"
+ misc_feature complement(3528869..3529111)
+ /locus_tag="SARI_03595"
+ /note="Homeodomain-like domain; Region: HTH_32; pfam13565"
+ /db_xref="CDD:222226"
+ misc_feature complement(3528773..3528961)
+ /locus_tag="SARI_03595"
+ /note="Winged helix-turn helix; Region: HTH_33; pfam13592"
+ /db_xref="CDD:222248"
+ misc_feature complement(3528395..3528784)
+ /locus_tag="SARI_03595"
+ /note="Transposase and inactivated derivatives [DNA
+ replication, recombination, and repair]; Region: COG3335"
+ /db_xref="CDD:225872"
+ misc_feature complement(3528344..3528751)
+ /locus_tag="SARI_03595"
+ /note="DDE superfamily endonuclease; Region: DDE_3;
+ pfam13358"
+ /db_xref="CDD:222070"
+ gene 3529676..3530758
+ /locus_tag="SARI_03596"
+ CDS 3529676..3530758
+ /locus_tag="SARI_03596"
+ /inference="protein motif:HMMPfam:IPR010476"
+ /inference="protein motif:HMMTigr:IPR004673"
+ /inference="similar to AA sequence:INSD:AAA27211.1"
+ /note="transports L-rhamnose and L-lyxose into the cell"
+ /codon_start=1
+ /transl_table=11
+ /product="rhamnose-proton symporter"
+ /protein_id="YP_001572550.1"
+ /db_xref="GI:161505438"
+ /db_xref="InterPro:IPR004673"
+ /db_xref="InterPro:IPR010476"
+ /translation="MQTEGVSHPKNNEEHVMSNAITMGIFWHLIGAASAACFYAPFKQ
+ VKQWSWETMWSVGGIVSWLILPWTISALLLPDFWAYYGQFNLSTLLPVFLFGAMWGIG
+ NINYGLTMRYLGMSMGIGIAIGITLIVGTLMTPIINGNFDVLIHTEGGRMTLLGVFVA
+ LIGVGIVTRAGQLKERKMGIKAEEFNLKKGLLLAVMCGIFSAGMSFAMNAAKPMHEAA
+ AALGVDPLYVALPSYVVIMGGGALVNLGFCFIRLAKMQNLSIKADFSLARPLIISNIL
+ LSALGGLMWYLQFFFYAWGHARIPAQYDYMSWMLHMSFYVLCGGLVGLVLKEWKNAGR
+ RPVAVLSLGCVVIIIAANIVGLGMAS"
+ misc_feature 3529724..3530755
+ /locus_tag="SARI_03596"
+ /note="L-rhamnose-proton symport protein (RhaT); Region:
+ RhaT; pfam06379"
+ /db_xref="CDD:115061"
+ misc_feature 3529742..3530749
+ /locus_tag="SARI_03596"
+ /note="RhaT L-rhamnose-proton symporter family protein;
+ Region: RhaT; TIGR00776"
+ /db_xref="CDD:233125"
+ gene complement(3530755..3531603)
+ /locus_tag="SARI_03597"
+ CDS complement(3530755..3531603)
+ /locus_tag="SARI_03597"
+ /inference="protein motif:FPrintScan:IPR000005"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR000005"
+ /inference="protein motif:HMMPfam:IPR003313"
+ /inference="protein motif:HMMSmart:IPR000005"
+ /inference="protein motif:ScanRegExp:IPR000005"
+ /inference="protein motif:superfamily:IPR003313"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:INSD:AAV79658.1"
+ /note="activates the expression of rhaRS in response to
+ L-rhamnose"
+ /codon_start=1
+ /transl_table=11
+ /product="transcriptional activator RhaR"
+ /protein_id="YP_001572551.1"
+ /db_xref="GI:161505439"
+ /db_xref="InterPro:IPR000005"
+ /db_xref="InterPro:IPR003313"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /translation="MANQLILLKKDFFTDEQQAVTVADRYPQDVFAEHTHEFCELVMV
+ WRGNGLHVLNDRPYRITRGDLFYIRAEDKHSYTSVNDLVLQNIIYCPERLKLNVNWQA
+ MIPGFQGAQWHPHWRLGSMGMNQARQVINQLEHESNGRDPLANEMAELLFGQLVMTLK
+ RHRYATDDLPATSRETLLDKLITALANSLECPFALDAFCQQEQCSERVLRQQFRAQTG
+ MTINQYLRQVRICHAQYLLQHSPLMISEISMQCGFEDSNYFSVVFTRETGMTPSQWRH
+ LSNQSD"
+ misc_feature complement(3530758..3531603)
+ /locus_tag="SARI_03597"
+ /note="transcriptional activator RhaR; Provisional;
+ Region: PRK13502"
+ /db_xref="CDD:184093"
+ misc_feature complement(3531151..3531537)
+ /locus_tag="SARI_03597"
+ /note="AraC-like ligand binding domain; Region:
+ AraC_binding; pfam02311"
+ /db_xref="CDD:145456"
+ misc_feature complement(3530776..3530889)
+ /locus_tag="SARI_03597"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ gene complement(3531709..3532545)
+ /locus_tag="SARI_03598"
+ CDS complement(3531709..3532545)
+ /locus_tag="SARI_03598"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR000005"
+ /inference="protein motif:HMMPfam:IPR003313"
+ /inference="protein motif:HMMSmart:IPR000005"
+ /inference="protein motif:ScanRegExp:IPR000005"
+ /inference="protein motif:superfamily:IPR003313"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:REFSEQ:NP_807215.1"
+ /note="activates the expression of the rhaBAD operon and
+ rhaT gene"
+ /codon_start=1
+ /transl_table=11
+ /product="transcriptional activator RhaS"
+ /protein_id="YP_001572552.1"
+ /db_xref="GI:161505440"
+ /db_xref="InterPro:IPR000005"
+ /db_xref="InterPro:IPR003313"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /translation="MTVLHSVDFFPSGKAPVAIEPRLPQAAFPEHHHDFHEIVIVEHG
+ TGIHVFNGQPYTISGGTVCFVRDHDRHLYEHTDNLCLTNVLWRSPEAFQFLAGLEQLL
+ PQEQDGYYPSHWRVNQSALQQVRQLVGLMERAGDGMDAPAVANREILFMQLLVLLRRS
+ SLMEGATDNDAKLNQLMAWLEDHFAEEVCWEAVAEQFSLSLRTLHRQLKQHTGLTPQR
+ YLNRLRLIKARHLLRHSDHSVTEIAYRCGFGDSNHFSTLFRREFNWSPRDIRQGRDAI
+ PQ"
+ misc_feature complement(3531712..3532545)
+ /locus_tag="SARI_03598"
+ /note="transcriptional activator RhaS; Provisional;
+ Region: PRK13503"
+ /db_xref="CDD:184094"
+ misc_feature complement(3532084..3532497)
+ /locus_tag="SARI_03598"
+ /note="AraC-like ligand binding domain; Region:
+ AraC_binding; pfam02311"
+ /db_xref="CDD:145456"
+ misc_feature complement(3531883..3532008)
+ /locus_tag="SARI_03598"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ misc_feature complement(3531733..3531846)
+ /locus_tag="SARI_03598"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ gene complement(3532771..3532920)
+ /locus_tag="SARI_03599"
+ CDS complement(3532771..3532920)
+ /locus_tag="SARI_03599"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572553.1"
+ /db_xref="GI:161505441"
+ /translation="MAKSHSEVLLRIIAHSLKKPSKAYLLVTDRKMSRWQQSKDERDG
+ VHIFY"
+ gene 3532960..3534375
+ /gene="rhaB"
+ /locus_tag="SARI_03600"
+ CDS 3532960..3534375
+ /gene="rhaB"
+ /locus_tag="SARI_03600"
+ /inference="protein motif:HMMPanther:IPR000577"
+ /inference="protein motif:HMMPfam:IPR000577"
+ /inference="protein motif:HMMTigr:IPR013449"
+ /inference="similar to AA sequence:REFSEQ:YP_152968.1"
+ /note="catalyzes the ATP-dependent phosphorylation of
+ rhamnulose"
+ /codon_start=1
+ /transl_table=11
+ /product="rhamnulokinase"
+ /protein_id="YP_001572554.1"
+ /db_xref="GI:161505442"
+ /db_xref="InterPro:IPR000577"
+ /db_xref="InterPro:IPR013449"
+ /translation="MLARYDSKHRTLTLREIHRFVNYLQKKEGFDTWDIDSLEKNIRL
+ GLKKVCDEGILIDSIGIDTWGVDYVLLDKHGQRVGLPVSYRDNRTTGIMSQALVQIGK
+ SEIYRRSGIQFLPFNTIYQLRALTKQQPELTAQVAHALLMPDYFSYRLTGEMNWEYTN
+ ATTTQLVNINTDDWDETLLAWTGAKQSWFGRPSHPGNVIGDWICPQGNRIPVVAVASH
+ DTASAVIASPLANKHSAYLSSGTWSLMGFESKKPYTTDEALAANITNEGGAEGRYRVL
+ KNIMGLWLLQRVLKERRITDLPALIAQTEALPTCRFLINPNDDRFINPDDMRAEIQAA
+ CRETDQPVPVSDAELARCIFDSLALLYADILHELANLRGEKFTQLHIVGGGCQNALLN
+ QLCADACGIRVMAGPVEASTLGNIGIQLMTLDELNNVDDFRQVVSANYDLTTYIPNPD
+ SEIARHVAQFQPKRQTKELCA"
+ misc_feature 3532960..3534372
+ /gene="rhaB"
+ /locus_tag="SARI_03600"
+ /note="rhamnulokinase; Provisional; Region: rhaB;
+ PRK10640"
+ /db_xref="CDD:182609"
+ misc_feature 3532960..3534216
+ /gene="rhaB"
+ /locus_tag="SARI_03600"
+ /note="L-rhamnulose kinases; a subfamily of the FGGY
+ family of carbohydrate kinases; Region: FGGY_RhuK;
+ cd07771"
+ /db_xref="CDD:198349"
+ misc_feature order(3532960..3532962,3532966..3532968,3532972..3532974,
+ 3532993..3532995,3532999..3533001,3533014..3533016,
+ 3533128..3533151,3533209..3533214,3533263..3533268,
+ 3533275..3533277,3533287..3533301,3533305..3533307,
+ 3533431..3533436,3533443..3533445,3533464..3533466,
+ 3533545..3533547,3533596..3533604,3533611..3533625,
+ 3533632..3533634,3533638..3533643,3533680..3533685,
+ 3533713..3533721,3533725..3533727,3533731..3533736,
+ 3533743..3533766,3533776..3533781,3533791..3533793,
+ 3533806..3533808,3533815..3533817,3533923..3533928,
+ 3534184..3534186,3534190..3534198,3534202..3534207,
+ 3534211..3534216)
+ /gene="rhaB"
+ /locus_tag="SARI_03600"
+ /note="N- and C-terminal domain interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:198349"
+ misc_feature order(3533149..3533157,3533209..3533211,3533611..3533619,
+ 3533674..3533685,3533689..3533691,3533791..3533793,
+ 3533803..3533805,3533815..3533817,3533848..3533850,
+ 3533860..3533862,3534106..3534114,3534118..3534123)
+ /gene="rhaB"
+ /locus_tag="SARI_03600"
+ /note="active site"
+ /db_xref="CDD:198349"
+ misc_feature order(3533149..3533157,3533209..3533211,3533611..3533619,
+ 3533683..3533685,3533689..3533691,3533791..3533793)
+ /gene="rhaB"
+ /locus_tag="SARI_03600"
+ /note="carbohydrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:198349"
+ misc_feature order(3533674..3533682,3533803..3533805,3533815..3533817,
+ 3533848..3533850,3533860..3533862,3534106..3534114,
+ 3534118..3534123)
+ /gene="rhaB"
+ /locus_tag="SARI_03600"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:198349"
+ gene 3534372..3535631
+ /locus_tag="SARI_03601"
+ CDS 3534372..3535631
+ /locus_tag="SARI_03601"
+ /inference="protein motif:HMMPfam:IPR009308"
+ /inference="protein motif:HMMTigr:IPR009308"
+ /inference="similar to AA sequence:REFSEQ:YP_218923.1"
+ /note="catalyzes the formation of L-rhamnulose from
+ L-rhamnose"
+ /codon_start=1
+ /transl_table=11
+ /product="L-rhamnose isomerase"
+ /protein_id="YP_001572555.1"
+ /db_xref="GI:161505443"
+ /db_xref="InterPro:IPR009308"
+ /translation="MTTQLEQAWELAKQRFAAVGIDVEEALRQLDRLPVSMHCWQGDD
+ VAGFENPEGSLTGGIQATGNYPGKARNATELRADLEKALSLIPGPKRLNLHAIYLESD
+ TPVARDQIKPEHFKNWVAWAKAHKLGLDFNPSCFSHPLSADGFTLAHADDNIRQFWID
+ HCKASRRVSAYFGEQLGTPSVMNIWIPDGMKDITVDRLAPRQRLLEALDEVISEKFDP
+ AHHIDAVESKLFGIGAESYTVGSNEFYMGYAASRQTALCLDAGHFHPTEVISDKISAA
+ MLYVPRLLLHVSRPVRWDSDHVVLLDDETQAIASEIVRHNLFDRVHIGLDFFDASINR
+ IAAWVIGTRNMKKALLRALLEPTDQLRQLEASGDYTARLALLEEQKSLPWQAVWEMYC
+ QRHDTPTGSQWLESVRAYEKEILSKRR"
+ misc_feature 3534372..3535628
+ /locus_tag="SARI_03601"
+ /note="L-rhamnose isomerase; Provisional; Region:
+ PRK01076"
+ /db_xref="CDD:179217"
+ gene 3535729..3536598
+ /locus_tag="SARI_03602"
+ CDS 3535729..3536598
+ /locus_tag="SARI_03602"
+ /inference="protein motif:Gene3D:IPR001303"
+ /inference="protein motif:HMMPfam:IPR001303"
+ /inference="protein motif:HMMTigr:IPR013447"
+ /inference="protein motif:superfamily:IPR001303"
+ /inference="similar to AA sequence:INSD:AAL22885.1"
+ /note="'KEGG: sec:SC3935 2.0e-142 rhaD;
+ rhamnulose-1-phosphate aldolase K01629;
+ COG: COG0235 Ribulose-5-phosphate 4-epimerase and related
+ epimerases and aldolases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="rhamnulose-1-phosphate aldolase"
+ /protein_id="YP_001572556.1"
+ /db_xref="GI:161505444"
+ /db_xref="InterPro:IPR001303"
+ /db_xref="InterPro:IPR013447"
+ /translation="MKSGTLRIINRNTNMQNITTSWFVQGMIKATSDAWLKGWDERNG
+ GNLTLRLDEVDIAPFTADFEEKPRYIALSQPMPLLANTPFIVTGSGKFFRNVQLDPSA
+ NLGVVKIDSEGAGYHILWGLTHNAVPTSELPAHFLSHCERIKATHGKDRVIMHCHATN
+ LIALTYVLENNTALITRKLWEGSTECLVVFPDGVGILPWMVPGTDEIGQATAQEIQKH
+ SLVLWPFHGVFGSGPTLDETFGLIDTAEKSAEVLVKIYSMGGMKQTIARDELTALAKR
+ FGVTPLASAIALY"
+ misc_feature 3535771..3536592
+ /locus_tag="SARI_03602"
+ /note="rhamnulose-1-phosphate aldolase; Provisional;
+ Region: PRK03634"
+ /db_xref="CDD:179615"
+ misc_feature order(3535813..3535815,3535825..3535827,3535849..3535851,
+ 3536002..3536004,3536008..3536013,3536197..3536199,
+ 3536203..3536208,3536221..3536229,3536272..3536274,
+ 3536278..3536283,3536323..3536325,3536401..3536403,
+ 3536434..3536436,3536455..3536457,3536467..3536469,
+ 3536488..3536490,3536548..3536550)
+ /locus_tag="SARI_03602"
+ /note="intersubunit interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238232"
+ misc_feature order(3535864..3535866,3535993..3535998,3536113..3536121,
+ 3536191..3536193,3536197..3536199,3536404..3536406)
+ /locus_tag="SARI_03602"
+ /note="active site"
+ /db_xref="CDD:238232"
+ misc_feature order(3536191..3536193,3536197..3536199,3536404..3536406)
+ /locus_tag="SARI_03602"
+ /note="Zn2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238232"
+ gene 3536661..3537815
+ /locus_tag="SARI_03603"
+ CDS 3536661..3537815
+ /locus_tag="SARI_03603"
+ /inference="protein motif:HMMPfam:IPR001670"
+ /inference="protein motif:HMMTigr:IPR013460"
+ /inference="protein motif:ScanRegExp:IPR001670"
+ /inference="similar to AA sequence:INSD:"
+ /note="'KEGG: stm:STM4044 1.1e-189 putative alcohol
+ dehydrogenase K00001;
+ COG: COG1454 Alcohol dehydrogenase, class IV;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572557.1"
+ /db_xref="GI:161505445"
+ /db_xref="InterPro:IPR001670"
+ /db_xref="InterPro:IPR013460"
+ /translation="MFMSFMLALPKISLHGAGAIGDMVKLIANKQWGKALIVTDSQLV
+ KLGLLDNLFSALDAHNMHYHLFDKVFPNPTEALVQKGYAAYQAEACDYIIAFGGGSPI
+ DTAKAVKILTANPGPSTAYSGVGKVKNAGVPLVAINTTAGTAAEMTSNAVIIDTERQV
+ KEVIIDPNIIPDIAVDDASVMLEIPASVTAATGMDALTHAVEAYVSVGAHPLTDANAL
+ EAVRLINLWLPKAVDDGHNLEAREQMAFGQYLAGMAFNSAGLGLVHALAHQPGATHNL
+ PHGVCNAILLPIIENFNRPNAVARFARLAQAMGVDTRGMSDEAASQEAINAIRALSKR
+ VGIPEGFSQLGVTKDDIEGWLDKALADPCAPCNPRTASRDEVRELYLEAL"
+ misc_feature 3536670..3537800
+ /locus_tag="SARI_03603"
+ /note="lactaldehyde reductase; Region: lactal_redase;
+ TIGR02638"
+ /db_xref="CDD:131686"
+ misc_feature 3536673..3537800
+ /locus_tag="SARI_03603"
+ /note="Lactadehyde:propanediol oxidoreductase (LPO)
+ catalyzes the interconversion between L-lactaldehyde and
+ L-1,2-propanediol in Escherichia coli and other
+ enterobacteria; Region: LPO; cd08176"
+ /db_xref="CDD:173935"
+ misc_feature order(3536691..3536705,3537174..3537176,3537303..3537305,
+ 3537396..3537398)
+ /locus_tag="SARI_03603"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:173935"
+ misc_feature order(3536778..3536780,3536952..3536960,3537075..3537080,
+ 3537087..3537089,3537114..3537116,3537141..3537143,
+ 3537198..3537200,3537222..3537224,3537243..3537245,
+ 3537255..3537257,3537450..3537452,3537492..3537494)
+ /locus_tag="SARI_03603"
+ /note="active site"
+ /db_xref="CDD:173935"
+ misc_feature order(3537243..3537245,3537255..3537257,3537450..3537452,
+ 3537492..3537494)
+ /locus_tag="SARI_03603"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:173935"
+ gene 3537812..3538126
+ /locus_tag="SARI_03604"
+ CDS 3537812..3538126
+ /locus_tag="SARI_03604"
+ /inference="protein motif:HMMPfam:IPR008000"
+ /inference="protein motif:HMMTigr:IPR013448"
+ /inference="protein motif:superfamily:IPR011008"
+ /inference="similar to AA sequence:INSD:AAL22883.1"
+ /note="'KEGG: msm:MSMEG_0587 3.6e-08 rhaU; L-rhamnose
+ 1-epimerase;
+ COG: COG3254 Uncharacterized conserved protein;
+ Psort location: cytoskeletal, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572558.1"
+ /db_xref="GI:161505446"
+ /db_xref="InterPro:IPR008000"
+ /db_xref="InterPro:IPR011008"
+ /db_xref="InterPro:IPR013448"
+ /translation="MIRKAFVMQVNADAHEEYQRRHNPIWPELEAVLKSHGAHHYAIY
+ LDVERNLLFATVEIESEARWNAVASTDICQRWWKHMRDVMPANPDNSPVSAELKEVFW
+ LA"
+ misc_feature 3537818..3538123
+ /locus_tag="SARI_03604"
+ /note="L-rhamnose 1-epimerase; Region: YiiL_rotase;
+ TIGR02625"
+ /db_xref="CDD:131674"
+ gene complement(3538169..3538783)
+ /locus_tag="SARI_03605"
+ CDS complement(3538169..3538783)
+ /locus_tag="SARI_03605"
+ /inference="protein motif:HMMPfam:IPR001387"
+ /inference="protein motif:HMMPfam:IPR013096"
+ /inference="protein motif:HMMSmart:IPR001387"
+ /inference="protein motif:superfamily:IPR011051"
+ /inference="similar to AA sequence:REFSEQ:YP_218919.1"
+ /note="'KEGG: psp:PSPPH_2917 5.5e-09 DNA-binding protein
+ K00517;
+ COG: COG1396 Predicted transcriptional regulators;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572559.1"
+ /db_xref="GI:161505447"
+ /db_xref="InterPro:IPR001387"
+ /db_xref="InterPro:IPR011051"
+ /db_xref="InterPro:IPR013096"
+ /translation="MNGTDLLYKTNVSFVIVNVGCFMTQPISVIARSLVRERQRTGLS
+ LAEIARRAGIAKSTLSQLEAGNGNPSLETLWALCVALDIPFARLLEPQVQKTQVIRRG
+ EGTKVVAEQAHYQAILLAACPPGARRDIYLLLTQPGADRISHPHPQGAVEHIIITQGK
+ ALVGLTDAPEELAEGDYICYPGDQAHIFKALEPDTQAILVAEQN"
+ misc_feature complement(<3538508..3538696)
+ /locus_tag="SARI_03605"
+ /note="Predicted transcriptional regulators
+ [Transcription]; Region: HipB; COG1396"
+ /db_xref="CDD:224314"
+ misc_feature complement(3538520..3538684)
+ /locus_tag="SARI_03605"
+ /note="Helix-turn-helix XRE-family like proteins.
+ Prokaryotic DNA binding proteins belonging to the
+ xenobiotic response element family of transcriptional
+ regulators; Region: HTH_XRE; cd00093"
+ /db_xref="CDD:238045"
+ misc_feature complement(order(3538592..3538594,3538667..3538669,
+ 3538679..3538681))
+ /locus_tag="SARI_03605"
+ /note="non-specific DNA binding site [nucleotide binding];
+ other site"
+ /db_xref="CDD:238045"
+ misc_feature complement(order(3538595..3538597,3538670..3538672))
+ /locus_tag="SARI_03605"
+ /note="salt bridge; other site"
+ /db_xref="CDD:238045"
+ misc_feature complement(order(3538589..3538594,3538604..3538606,
+ 3538613..3538615,3538646..3538651))
+ /locus_tag="SARI_03605"
+ /note="sequence-specific DNA binding site [nucleotide
+ binding]; other site"
+ /db_xref="CDD:238045"
+ misc_feature complement(3538184..>3538378)
+ /locus_tag="SARI_03605"
+ /note="Cupin domain; Region: Cupin_2; cl17218"
+ /db_xref="CDD:247772"
+ gene 3538818..3539477
+ /locus_tag="SARI_03606"
+ CDS 3538818..3539477
+ /locus_tag="SARI_03606"
+ /inference="protein motif:HMMPfam:IPR011606"
+ /inference="similar to AA sequence:REFSEQ:NP_807221.1"
+ /note="'COG: COG1296 Predicted branched-chain amino acid
+ permease (azaleucine resistance);
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572560.1"
+ /db_xref="GI:161505448"
+ /db_xref="InterPro:IPR011606"
+ /translation="MKHYFSCLKGDTIKAIFLVCLAVGVVGMSYGSLAMAYGFPIWVP
+ FVLSIFVLAGASEFMFIGIVASGGNPLAAAAAGLLVNARHVPFGVTVRDLVGTRAASF
+ FGCHIMNDESVVFGLSQKTPEQRKAAYWLCGLGVAILWPTGTLLGTLVGKLLPAPETI
+ GLDAVFPAILLALVIPAFKNRTTLIRGCSGAALSLAAVPFVAAGLPVLLSLLGLLVRK
+ K"
+ misc_feature 3538818..3539420
+ /locus_tag="SARI_03606"
+ /note="AzlC protein; Region: AzlC; cl00570"
+ /db_xref="CDD:241956"
+ gene 3539477..3539800
+ /locus_tag="SARI_03607"
+ CDS 3539477..3539800
+ /locus_tag="SARI_03607"
+ /inference="protein motif:HMMPfam:IPR008407"
+ /inference="similar to AA sequence:INSD:AAL22880.1"
+ /note="'COG: NOG19750 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572561.1"
+ /db_xref="GI:161505449"
+ /db_xref="InterPro:IPR008407"
+ /translation="MGNMTLFIIGIALLSAGTYLMRLGGAKLGSRLALSERSQALLSD
+ AATVLLFSVALATTFYEGEHFAGMARVLGVAFAVFLAWRKMPLIVVIIAAAVVTALLR
+ LAGLH"
+ misc_feature 3539495..3539728
+ /locus_tag="SARI_03607"
+ /note="Branched-chain amino acid transport protein (AzlD);
+ Region: AzlD; pfam05437"
+ /db_xref="CDD:203251"
+ gene 3539985..3540182
+ /locus_tag="SARI_03608"
+ CDS 3539985..3540182
+ /locus_tag="SARI_03608"
+ /inference="protein motif:BlastProDom:IPR002178"
+ /inference="protein motif:Gene3D:IPR002178"
+ /inference="protein motif:HMMPfam:IPR002178"
+ /inference="similar to AA sequence:REFSEQ:ZP_00711384.1"
+ /note="'KEGG: ece:Z5443 1.7e-19 frvA; PTS system,
+ fructose-specific IIA component K02768;
+ COG: COG1762 Phosphotransferase system
+ mannitol/fructose-specific IIA domain (Ntr-type);
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572562.1"
+ /db_xref="GI:161505450"
+ /db_xref="InterPro:IPR002178"
+ /translation="MTALTTNCIDLSIQGNSAYSILKQLAEMAFQNGYITDRHQFLQT
+ LLLREKLHSTRYGLRHRRTAR"
+ misc_feature 3539985..>3540155
+ /locus_tag="SARI_03608"
+ /note="PTS_IIA, PTS system, fructose/mannitol specific IIA
+ subunit. The bacterial phosphoenolpyruvate: sugar
+ phosphotransferase system (PTS) is a multi-protein system
+ involved in the regulation of a variety of metabolic and
+ transcriptional processes. This...; Region: PTS_IIA_fru;
+ cl00163"
+ /db_xref="CDD:241651"
+ misc_feature 3540126..3540128
+ /locus_tag="SARI_03608"
+ /note="active site"
+ /db_xref="CDD:238129"
+ gene 3540193..3540381
+ /locus_tag="SARI_03609"
+ CDS 3540193..3540381
+ /locus_tag="SARI_03609"
+ /inference="protein motif:BlastProDom:IPR002178"
+ /inference="protein motif:Gene3D:IPR002178"
+ /inference="protein motif:HMMPfam:IPR002178"
+ /inference="similar to AA sequence:REFSEQ:YP_312821.1"
+ /note="'KEGG: ssn:SSO_4070 2.2e-24 frvA; PTS system,
+ fructose-specific IIA component K02768;
+ COG: COG1762 Phosphotransferase system
+ mannitol/fructose-specific IIA domain (Ntr-type);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572563.1"
+ /db_xref="GI:161505451"
+ /db_xref="InterPro:IPR002178"
+ /translation="MKHPFVLFTRKSENVDWKASDGEGVNCWVCLGLPLAGEDDQVKI
+ IGTLCRKIIHQDFINQLK"
+ misc_feature <3540196..3540378
+ /locus_tag="SARI_03609"
+ /note="PTS_IIA, PTS system, fructose/mannitol specific IIA
+ subunit. The bacterial phosphoenolpyruvate: sugar
+ phosphotransferase system (PTS) is a multi-protein system
+ involved in the regulation of a variety of metabolic and
+ transcriptional processes. This...; Region: PTS_IIA_fru;
+ cl00163"
+ /db_xref="CDD:241651"
+ gene 3540443..3540862
+ /locus_tag="SARI_03610"
+ CDS 3540443..3540862
+ /locus_tag="SARI_03610"
+ /inference="protein motif:HMMPfam:IPR003353"
+ /inference="similar to AA sequence:REFSEQ:ZP_00921283.1"
+ /note="'KEGG: ecs:ECs4825 2.2e-26 fructose-like PTS system
+ enzyme IIBC component K02769:K02770;
+ COG: COG1299 Phosphotransferase system, fructose-specific
+ IIC component;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572564.1"
+ /db_xref="GI:161505452"
+ /db_xref="InterPro:IPR003353"
+ /translation="MESSLRLVAITNCPAEIAHTSMVAEALEQKARSLGHTIKVETQG
+ SSGIENHLTHEEIAAADSGVKLGKQDVQQGSMMGHLMAGVSPALPFVIGGGRRRYSRQ
+ SGALASGAGRTGNGAAHPAIKPVPGASDDAGQTVYRK"
+ misc_feature 3540461..>3540625
+ /locus_tag="SARI_03610"
+ /note="PTS_IIB_fructose: subunit IIB of enzyme II (EII) of
+ the fructose-specific phosphoenolpyruvate:carbohydrate
+ phosphotransferase system (PTS). In this system, EII (also
+ referred to as FruAB) is a fructose-specific permease made
+ up of two proteins (FruA and...; Region: PTS_IIB_fructose;
+ cd05569"
+ /db_xref="CDD:99911"
+ misc_feature order(3540479..3540481,3540485..3540490,3540497..3540502)
+ /locus_tag="SARI_03610"
+ /note="active site"
+ /db_xref="CDD:99911"
+ misc_feature order(3540479..3540490,3540494..3540502)
+ /locus_tag="SARI_03610"
+ /note="P-loop; other site"
+ /db_xref="CDD:99911"
+ misc_feature 3540479..3540481
+ /locus_tag="SARI_03610"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:99911"
+ gene 3540717..3540896
+ /locus_tag="SARI_03611"
+ CDS 3540717..3540896
+ /locus_tag="SARI_03611"
+ /inference="protein motif:HMMPfam:IPR005495"
+ /inference="similar to AA sequence:REFSEQ:ZP_00699366.1"
+ /note="'COG: COG0795 Predicted permeases;
+ Psort location: vesicles of secretory system, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572565.1"
+ /db_xref="GI:161505453"
+ /db_xref="InterPro:IPR005495"
+ /translation="MAAVDGDIPANLVLSLLELGVPEMAQLILPLSLFPGLLMTLGKL
+ YTESEIMVMHACGLS"
+ misc_feature 3540720..>3540893
+ /locus_tag="SARI_03611"
+ /note="Predicted permeases [General function prediction
+ only]; Region: COG0795; cl12074"
+ /db_xref="CDD:245860"
+ gene 3540936..3541175
+ /locus_tag="SARI_03612"
+ CDS 3540936..3541175
+ /locus_tag="SARI_03612"
+ /inference="protein motif:HMMPfam:IPR003352"
+ /inference="similar to AA sequence:REFSEQ:ZP_00701902.1"
+ /note="'KEGG: sfl:SF3976 3.0e-36 frvB; PTS system,
+ fructose-like enzyme IIBC component K02769:K02770;
+ COG: COG1299 Phosphotransferase system, fructose-specific
+ IIC component;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572566.1"
+ /db_xref="GI:161505454"
+ /db_xref="InterPro:IPR003352"
+ /translation="MLIPFVTLLLFGVLTYYVIGPVMSDVMGGLLHFLNTIPPSMKMG
+ AAFLVGTMLAFDMGGPINKTAWFFCFSLLEKYIYD"
+ misc_feature <3540936..>3541169
+ /locus_tag="SARI_03612"
+ /note="Phosphotransferase system, fructose-specific IIC
+ component [Carbohydrate transport and metabolism]; Region:
+ FruA; cl17425"
+ /db_xref="CDD:247979"
+ gene 3541203..3541403
+ /locus_tag="SARI_03613"
+ CDS 3541203..3541403
+ /locus_tag="SARI_03613"
+ /inference="similar to AA sequence:REFSEQ:ZP_00701902.1"
+ /note="'KEGG: sfl:SF3976 1.9e-24 frvB; PTS system,
+ fructose-like enzyme IIBC component K02769:K02770;
+ COG: COG1299 Phosphotransferase system, fructose-specific
+ IIC component;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572567.1"
+ /db_xref="GI:161505455"
+ /translation="MPPVAAGIATYLAPKLFTLQEKAAASSAIVVGATVATEPAIPYA
+ LAAPLPMITANTLSGGIAGIRH"
+ misc_feature <3541203..3541391
+ /locus_tag="SARI_03613"
+ /note="Phosphotransferase system, fructose-specific IIC
+ component [Carbohydrate transport and metabolism]; Region:
+ FruA; cl17425"
+ /db_xref="CDD:247979"
+ gene 3541493..3541723
+ /locus_tag="SARI_03614"
+ CDS 3541493..3541723
+ /locus_tag="SARI_03614"
+ /inference="similar to AA sequence:REFSEQ:ZP_00736308.1"
+ /note="'KEGG: eco:b3897 5.2e-25 frvR; predicted regulator
+ K00924;
+ COG: COG3711 Transcriptional antiterminator;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572568.1"
+ /db_xref="GI:161505456"
+ /translation="MTLSADAVCSLLQRVPGAASLNIIDAQLIDNITGHLLRCVSAPI
+ WLPEHRQSSMNNLKSAWPAAFDMSLRPGAASE"
+ misc_feature <3541493..>3541699
+ /locus_tag="SARI_03614"
+ /note="putative frv operon regulatory protein;
+ Provisional; Region: PRK09863"
+ /db_xref="CDD:182121"
+ gene 3541740..3541988
+ /locus_tag="SARI_03615"
+ CDS 3541740..3541988
+ /locus_tag="SARI_03615"
+ /inference="similar to AA sequence:REFSEQ:ZP_00711387.1"
+ /note="'KEGG: eco:b3897 4.2e-13 frvR; predicted regulator
+ K00924;
+ COG: COG3711 Transcriptional antiterminator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572569.1"
+ /db_xref="GI:161505457"
+ /translation="MLSDQNAIATINQQAIERDVLHCRVMIARTPGEVNAISQEIDPV
+ LIINNSQNASFLRHEVFITRISREKTGIPSPGKFVTDW"
+ misc_feature <3541740..>3541895
+ /locus_tag="SARI_03615"
+ /note="putative frv operon regulatory protein;
+ Provisional; Region: PRK09863"
+ /db_xref="CDD:182121"
+ gene complement(3541853..3542251)
+ /locus_tag="SARI_03616"
+ CDS complement(3541853..3542251)
+ /locus_tag="SARI_03616"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572570.1"
+ /db_xref="GI:161505458"
+ /translation="MAVYDASQITEDFQLVTRSGGSAGEQHMVNGLIINLYGGRQGDE
+ KSAEMEFLLAPAVGDGEVIDNQVLAFAFPGADSQRVILGDVGLAHQSVTNLPGDGIPV
+ FSREIRVMKTSCLRKEAFWLLLIISTGSIS"
+ gene complement(3542361..3542573)
+ /locus_tag="SARI_03617"
+ CDS complement(3542361..3542573)
+ /locus_tag="SARI_03617"
+ /inference="protein motif:HMMPfam:IPR010854"
+ /inference="similar to AA sequence:INSD:ABP62737.1"
+ /note="'COG: NOG13870 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572571.1"
+ /db_xref="GI:161505459"
+ /db_xref="InterPro:IPR010854"
+ /translation="MKIIRNFVAVVAFATSFGSFAAQSVTATDSTLESAEAKIAAQAE
+ QVGASDYKITQAYTGNRVHMTAELLK"
+ misc_feature complement(3542364..3542504)
+ /locus_tag="SARI_03617"
+ /note="Protein of unknown function (DUF1471); Region:
+ DUF1471; pfam07338"
+ /db_xref="CDD:219380"
+ gene complement(3543190..3543369)
+ /locus_tag="SARI_03619"
+ CDS complement(3543190..3543369)
+ /locus_tag="SARI_03619"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572572.1"
+ /db_xref="GI:161505461"
+ /translation="MFKPSLILSFLRSMGSIKSQKKTSESKIFFQEKCVIFYIYHLIF
+ DNAFNEKYLYWSKKL"
+ gene 3543228..3543320
+ /locus_tag="SARI_03618"
+ CDS 3543228..3543320
+ /locus_tag="SARI_03618"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572573.1"
+ /db_xref="GI:161505460"
+ /translation="MHYQILNGKYKILRTSLEKKFYFQMSFSVT"
+ gene 3543394..3543648
+ /locus_tag="SARI_03620"
+ CDS 3543394..3543648
+ /locus_tag="SARI_03620"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572574.1"
+ /db_xref="GI:161505462"
+ /translation="MNLLTEKEINNICGAGFGDYGGYTSGELGAKAGCAIDSILGIPA
+ CGHNNGKNPGKLDPHAPNISEPLKPKPYWNQPMTEWHGGF"
+ gene 3543886..3544521
+ /locus_tag="SARI_03621"
+ CDS 3543886..3544521
+ /locus_tag="SARI_03621"
+ /inference="protein motif:superfamily:IPR011004"
+ /inference="similar to AA sequence:REFSEQ:NP_049948.1"
+ /note="'COG: NOG06285 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572575.1"
+ /db_xref="GI:161505463"
+ /db_xref="InterPro:IPR011004"
+ /translation="MEPMKYELTNITQYYNGVALRRIRALRDSELSGFKRGDIGGWIQ
+ TTDNLSQEGECWIHHDARVLGNARVTGDCRISDYAEISGNARVSGFSLIEHCAVVTDN
+ AVLEGVVRLSGYSRVFGHAHICCGEDGPQILSDVWINFDIDYDTNYAIFVDGRDAGLI
+ IAVSQNGSICVAGNWDFDGFFGDLPAFKQWAQKHSKAAVRLLPGISYWLSQ"
+ gene 3544703..3545977
+ /locus_tag="SARI_03622"
+ CDS 3544703..3545977
+ /locus_tag="SARI_03622"
+ /inference="protein motif:FPrintScan:IPR003997"
+ /inference="protein motif:HMMPfam:IPR006143"
+ /inference="protein motif:ScanRegExp:IPR006144"
+ /inference="protein motif:superfamily:IPR011053"
+ /inference="similar to AA sequence:INSD:AAP03991.1"
+ /note="'COG: COG0845 Membrane-fusion protein;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572576.1"
+ /db_xref="GI:161505464"
+ /db_xref="InterPro:IPR003997"
+ /db_xref="InterPro:IPR006143"
+ /db_xref="InterPro:IPR006144"
+ /db_xref="InterPro:IPR011053"
+ /translation="MFRKEALESRKMIWHGKALLLPGIPPIIVIFFCLFFLSFFLYFV
+ ITKDYTRRVTVSGEVTTWPRPVNIYSDVQGFVVDRFVTEGQVVKKNTPLYQIDVSKST
+ RNGVVSSRHHADITTQIRQVDNIISGLKDSKKATLDALEKQKIQYIQALQSSSDIIRH
+ AEEGIRIMKKNMDNYRQYQSRGLITKDQLTNQETIYYQQQSNLLGLNSQNEQNALQLT
+ SLESQIRIQAAEFDNRIYQMILQRYELQKELINTDIESAVIIRALSDGKIDSLSVSTG
+ QMVSAGDSLAQILPDTVRHYYLVLWVPNTAVPYITTGDRVNIRYEAFPAEKFGQFPGV
+ IQSISRAPATPQEMRTYQGAPQNTSSLSVPYYKVITRLDRQSITYGGKSRPLENGMKA
+ QVTLFLEKRKIWQWMLSPFYDMKNSTTGPVNE"
+ misc_feature 3544892..3545821
+ /locus_tag="SARI_03622"
+ /note="HlyD family secretion protein; Region: HlyD;
+ pfam00529"
+ /db_xref="CDD:215974"
+ misc_feature 3544892..>3545002
+ /locus_tag="SARI_03622"
+ /note="Biotin-lipoyl like; Region: Biotin_lipoyl_2;
+ pfam13533"
+ /db_xref="CDD:205711"
+ misc_feature 3545477..3545785
+ /locus_tag="SARI_03622"
+ /note="HlyD family secretion protein; Region: HlyD_3;
+ pfam13437"
+ /db_xref="CDD:222128"
+ gene 3545970..3548069
+ /locus_tag="SARI_03623"
+ CDS 3545970..3548069
+ /locus_tag="SARI_03623"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR001140"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMPfam:IPR005074"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:REFSEQ:ZP_00833986.1"
+ /note="'KEGG: pen:PSEEN4080 2.8e-152 type I toxin efflux
+ ATP-binding membrane protein;
+ COG: COG2274 ABC-type bacteriocin/lantibiotic exporters,
+ contain an N-terminal double-glycine peptidase domain;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572577.1"
+ /db_xref="GI:161505465"
+ /db_xref="InterPro:IPR001140"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR005074"
+ /translation="MNSEILKKYISRLEISLFRRVPVIHQTESSECGIACLAMVFGHY
+ GKSIDLFSLRQQFNISSRGATLYSIRTIAVQMGMTARALSLDLNELNVLRRPCILHWN
+ FNHFVVLVSVKRNGFVLHDPARGRIIVSKAEASKCFTGIALELWPGSTFRRERVKKRL
+ NLVTLINSIHGIKGALLKIFALSIVVEAIGLILPAGTQLVMDHALPAGDRGLLSMICI
+ SLMFFILLRATVSTSRAWISLIMGTLVNIQWQSGLFSHLLRLPLSYFERRKLGDIQSR
+ FGSLNTLRTTFTTSMVGAIMDGIMVCGLLIMMLLYGKSLTWVVLGFTVVYIAIRLFTY
+ TYYRQLSEEQLIMEARVSSYFMETLYGIAAVKMQGMTDRRHTHWFNLQTDAINTGIRV
+ TKMDIFFGGLNIFISACEQTIILWLGISLVMDNEMTIGMFVAFGAYRMQFSDRISTLV
+ GFLLQLRMMSLHNERISDIALNEQESVKPDIPVSEKITPVSLEVKSLTFRYDQQSMPV
+ FSELNLTVSPGESVAIIGPSGSGKTTLMKVLCGLFKADSGQVLIDGNDIQQMGVNNYR
+ KITGCVMQDDRLFSGTIRENICGFSENIDDEWMAECAKASFIHDTIMSMPMGYDTLTG
+ ELGEGLSGGQKQRLFIARALYRKPRILFMDEATSALDSKSENYVNSAIKSLNITRIII
+ AHRESTIKSVDRVFSLT"
+ misc_feature 3546027..3548057
+ /locus_tag="SARI_03623"
+ /note="ABC-type bacteriocin/lantibiotic exporters, contain
+ an N-terminal double-glycine peptidase domain [Defense
+ mechanisms]; Region: SunT; COG2274"
+ /db_xref="CDD:225183"
+ misc_feature 3546030..3546410
+ /locus_tag="SARI_03623"
+ /note="A sub-family of peptidase family C39. Peptidase
+ family C39 mostly contains bacteriocin-processing
+ endopeptidases from bacteria. The cysteine peptidases in
+ family C39 cleave the "double-glycine" leader
+ peptides from the precursors of various...; Region:
+ Peptidase_C39C; cd02419"
+ /db_xref="CDD:239100"
+ misc_feature order(3546045..3546047,3546063..3546065,3546282..3546284,
+ 3546330..3546332)
+ /locus_tag="SARI_03623"
+ /note="putative active site [active]"
+ /db_xref="CDD:239100"
+ misc_feature 3546495..3547307
+ /locus_tag="SARI_03623"
+ /note="ABC transporter transmembrane region; Region:
+ ABC_membrane; pfam00664"
+ /db_xref="CDD:216049"
+ misc_feature 3547446..3548063
+ /locus_tag="SARI_03623"
+ /note="ATP-binding cassette transporter nucleotide-binding
+ domain; Region: ABC_ATPase; cl17201"
+ /db_xref="CDD:247755"
+ misc_feature 3547545..3547568
+ /locus_tag="SARI_03623"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature order(3547554..3547559,3547563..3547571,3547689..3547691,
+ 3547929..3547934,3548019..3548021)
+ /locus_tag="SARI_03623"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213179"
+ misc_feature 3547680..3547691
+ /locus_tag="SARI_03623"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213179"
+ misc_feature 3547857..3547886
+ /locus_tag="SARI_03623"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213179"
+ misc_feature 3547917..3547934
+ /locus_tag="SARI_03623"
+ /note="Walker B; other site"
+ /db_xref="CDD:213179"
+ misc_feature 3547941..3547952
+ /locus_tag="SARI_03623"
+ /note="D-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature 3548007..3548027
+ /locus_tag="SARI_03623"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213179"
+ gene complement(3548273..3549157)
+ /locus_tag="SARI_03624"
+ CDS complement(3548273..3549157)
+ /locus_tag="SARI_03624"
+ /inference="protein motif:FPrintScan:IPR000005"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR000005"
+ /inference="protein motif:HMMSmart:IPR000005"
+ /inference="protein motif:ScanRegExp:IPR000005"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:INSD:EAN17832.1"
+ /note="'KEGG: bur:Bcep18194_C7173 0.00019 two component
+ transcriptional regulator, AraC family;
+ COG: COG2207 AraC-type DNA-binding domain-containing
+ proteins;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572578.1"
+ /db_xref="GI:161505466"
+ /db_xref="InterPro:IPR000005"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /translation="MEKIRQAFLSSNSSIDFIEYCSCPYIILPCSQDTQTSELDCYID
+ VFYIKKGVAELMFNAPPSIKLSPGEFIFLNRKCSDCFFLTGGQDTEILQTRVVPRGLY
+ KDLIVYYGCYNSLYVLDSGHIDVIPVASEMISLLLKLQKSKSEAILSLEVPISLFFIH
+ IYLNKVANSSLPFNNTGHQFFKLILEMIKSPDYPWRVKDMAKEYNMNPNSFISEFKKI
+ SGFTPCNFLKKTRLNRGRQLLENTDIPVAVIARQCGYNSHASFAFYFKKEYGLSPLKM
+ RNNAQSKYMLEISERLNQ"
+ misc_feature complement(3548474..3548599)
+ /locus_tag="SARI_03624"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ misc_feature complement(3548327..3548578)
+ /locus_tag="SARI_03624"
+ /note="helix_turn_helix, arabinose operon control protein;
+ Region: HTH_ARAC; smart00342"
+ /db_xref="CDD:197666"
+ misc_feature complement(3548324..3548434)
+ /locus_tag="SARI_03624"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ gene complement(3549254..3549742)
+ /locus_tag="SARI_03625"
+ CDS complement(3549254..3549742)
+ /locus_tag="SARI_03625"
+ /note="'Psort location: extracellular, including cell
+ wall, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572579.1"
+ /db_xref="GI:161505467"
+ /translation="MKKYLSLVGLGIILLTLNACHQKPVKSVVTPITAPVQHQLPSLE
+ LLTLSESAHNGWSEVELIGRKWYVDSDTALTRSELNSLSLGQNDKKEMFLNIIPNQQG
+ QRKINEALRKKVDYVLLVLNGQAISLSKINSSQKLPFYVGDENTTIKVAEEITQKKIT
+ HQ"
+ gene complement(3549760..3550587)
+ /locus_tag="SARI_03626"
+ CDS complement(3549760..3550587)
+ /locus_tag="SARI_03626"
+ /inference="protein motif:BlastProDom:IPR006665"
+ /inference="protein motif:FPrintScan:IPR002368"
+ /inference="protein motif:FPrintScan:IPR006664"
+ /inference="protein motif:HMMPfam:IPR006665"
+ /inference="protein motif:HMMPfam:IPR007450"
+ /inference="similar to AA sequence:REFSEQ:YP_308796.1"
+ /note="'COG: COG2913 Small protein A (tmRNA-binding);
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572580.1"
+ /db_xref="GI:161505468"
+ /db_xref="InterPro:IPR002368"
+ /db_xref="InterPro:IPR006664"
+ /db_xref="InterPro:IPR006665"
+ /db_xref="InterPro:IPR007450"
+ /translation="MKIYAGKLLILAGVITLFGCQQNPSHPGKDGSIKEIIWPAPARA
+ KLGSGQGVFPTPESITLLDKGMTKDQVYLLLGRPHFDEGLFSVLEWDYLLHFRTPGYG
+ HHGVTTCQLKIIYNSDKRVSGIYWRSVGSENIICPPILHEKEETNRYTLNADILFRLN
+ EYQLNMSDKNSQNNLDKIISFIRERGKYSSISVYGYADRQGTHQHNMKLSALRAEYVK
+ KYLVSKGFPEDKIFAKGMGEAVPETSCPGLINESLTECLHPDRKVTVIVTPVINNRK"
+ misc_feature complement(<3550210..>3550440)
+ /locus_tag="SARI_03626"
+ /note="Outer membrane lipoprotein OmlA (small protein A)
+ [Cell envelope biogenesis, outer membrane]; Region: OlmA;
+ COG2913"
+ /db_xref="CDD:225465"
+ misc_feature complement(3550213..3550437)
+ /locus_tag="SARI_03626"
+ /note="SmpA / OmlA family; Region: SmpA_OmlA; pfam04355"
+ /db_xref="CDD:202983"
+ misc_feature complement(3549787..3550128)
+ /locus_tag="SARI_03626"
+ /note="Peptidoglycan binding domains similar to the
+ C-terminal domain of outer-membrane protein OmpA; Region:
+ OmpA_C-like; cd07185"
+ /db_xref="CDD:143586"
+ misc_feature complement(order(3549805..3549807,3549817..3549819,
+ 3549961..3549963,3549970..3549975,3549985..3549987,
+ 3549994..3549999,3550108..3550113))
+ /locus_tag="SARI_03626"
+ /note="ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:143586"
+ gene complement(3550652..3554764)
+ /locus_tag="SARI_03627"
+ CDS complement(3550652..3554764)
+ /locus_tag="SARI_03627"
+ /inference="protein motif:HMMPfam:IPR005594"
+ /inference="protein motif:HMMPfam:IPR008635"
+ /inference="protein motif:HMMPfam:IPR008640"
+ /inference="protein motif:HMMPfam:IPR009555"
+ /inference="similar to AA sequence:REFSEQ:ZP_01569254.1"
+ /note="'KEGG: eci:UTI89_C4143 4.0e-68 putative
+ autotransport adhesin K01423;
+ COG: COG5295 Autotransporter adhesin;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572581.1"
+ /db_xref="GI:161505469"
+ /db_xref="InterPro:IPR005594"
+ /db_xref="InterPro:IPR008635"
+ /db_xref="InterPro:IPR008640"
+ /db_xref="InterPro:IPR009555"
+ /translation="MKGIQITPIALLVVNTISMSSAYADIPVTCHTTGTSESDLFCGS
+ VSNTNGAVKSLAIGNNAFIPKAIIPGKTGIEQAIAIGSNVQATGDNSLVIGNDAITGK
+ TGSVAIGGDDAAGTYHAKGKGYILRAAGSNSADNNLTNFRANAAIGNGAVSLGANSQA
+ LSDGAVSIGAAATAGAGTQNGTTWNSTSGRQSIAVGAESSALQDNSIALGYRSEATGN
+ SSTAIGNNASAKNNNALAMGREASATGEQSIALGMNSGAEGSDALALGNSAHADAAGA
+ ILIGRDAKNTKDTLSAVGLPADNGINAIGIGSSVRSAANGIAIGRGAEAKISEATTIA
+ IGNGAVSAGGIAIGQGASVVKGNNPSGTASASVSVGRQTVVADYGVALGSRASVGITL
+ TGDGNPERVTTGGLYGTAVGINSGVYSNSALAVGHNAKVSENANAALAIGYNSLSSAQ
+ NAIAIGKGAKASADNTISIGTGNIVSGTNSGAIGDPSTVSGVNSYSIGNNNIISASNA
+ FVLGNAVNNAVDNSVVLGNDSTVSAAIATPGYSVNGVSHKFAGSSPISTVSIGDSGKE
+ RTLTNVAAGRLSPVSTDAINGSQLFAVTSEVEKGNLFAGNTGTFNRRLGETTTIRGGL
+ AADAAASNKNIRTVAKDGQVDILLADNLDVTSVKTGDTLLNTDGLHITGGPSVTTGGI
+ NAGNRVISNVGDAVNDTDAVNKRQLDNLSTTVSRGWNIQANGGDTETVAPGDTVNVTQ
+ GDNIEVTRAGKTLNIATSRKVNFDNVVIGAITLDKDSGKISGLADGALAPDSRDAVTG
+ SQLFSTNKNVSTNSQNIAANKAQIDSGLNFAGNTGTFNRHLGETTTIRGGLAADAAAS
+ NKNIRTVAKDGQVDILLADNLDVTSVKTGDTLLNTDGLHITGGPSVTTGGINAGNRVI
+ SNVGDAVNDTDAVNKRQLDNLSSIVGQGLTFAANEGGDLTRKPGDTLALKGGATTKGD
+ YSGKNIKTVTDVSSGMISIQIAESPVFGSVVVNDSNSGKITGVSNGIIAAESRDVVNG
+ GQIHRITTSIGNVIGGNAYVDQGGALVASNIGNTGKNTIHDAIDSVRSTAETASAGWN
+ LSVNGQQSSAVKPKETVDLNNNDGNIHLSKKDNQVTFNLSDSVKVKESIGIVNGPSLN
+ KTGIDGAGMKITNVADGVIAAGSKDAVNGGQIHDFVSGEVTRPITFAADSGTPYDARL
+ GSIVNIKGDDKNIRTVVNGNSLSVSLNERINVKSVTATESLSVANGANVDMGGNTIHN
+ VGNATRPGDAVNYGQFQQAFSSLGNQINRVERRANAGAAAAIATAGLTQAYIPGKSMM
+ SMSGGTFQGESSLAIGLSTISDNGNWVLKGSFSSTTRNQTGASVGIGFQF"
+ misc_feature complement(3554111..>3554542)
+ /locus_tag="SARI_03627"
+ /note="Left-handed beta-roll, including virulence factors
+ and various other proteins; Region: LbR-like; cl17507"
+ /db_xref="CDD:248061"
+ misc_feature complement(order(3554186..3554188,3554192..3554194,
+ 3554276..3554284,3554288..3554290,3554294..3554296,
+ 3554318..3554320,3554324..3554326,3554330..3554332,
+ 3554369..3554371,3554414..3554416,3554441..3554443,
+ 3554447..3554449,3554453..3554455,3554477..3554485,
+ 3554489..3554491,3554495..3554497,3554519..3554527,
+ 3554531..3554533,3554537..3554539))
+ /locus_tag="SARI_03627"
+ /note="trimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:240610"
+ misc_feature complement(3553787..3554191)
+ /locus_tag="SARI_03627"
+ /note="YadA-like, left-handed beta-roll; Region:
+ LbR_YadA-like; cd12820"
+ /db_xref="CDD:240612"
+ misc_feature complement(order(3553790..3553792,3553802..3553819,
+ 3553826..3553831,3553835..3553837,3553844..3553849,
+ 3553853..3553855,3553859..3553861,3553880..3553888,
+ 3553892..3553894,3553898..3553900,3553922..3553930,
+ 3553934..3553936,3553940..3553942,3553964..3553972,
+ 3553976..3553978,3553982..3553984,3554006..3554014,
+ 3554018..3554020,3554024..3554026,3554048..3554056,
+ 3554102..3554104,3554108..3554110,3554132..3554137,
+ 3554150..3554152,3554174..3554179,3554186..3554188))
+ /locus_tag="SARI_03627"
+ /note="trimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:240612"
+ misc_feature complement(3553313..>3553552)
+ /locus_tag="SARI_03627"
+ /note="Left-handed beta-roll, including virulence factors
+ and various other proteins; Region: LbR-like; cl17507"
+ /db_xref="CDD:248061"
+ misc_feature complement(order(3553364..3553366,3553370..3553372,
+ 3553394..3553402,3553406..3553408,3553412..3553414,
+ 3553436..3553438,3553442..3553444,3553448..3553450,
+ 3553454..3553456,3553484..3553486,3553490..3553492,
+ 3553496..3553498,3553502..3553504,3553526..3553534,
+ 3553538..3553540,3553544..3553546))
+ /locus_tag="SARI_03627"
+ /note="trimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:240610"
+ misc_feature complement(3550655..>3552148)
+ /locus_tag="SARI_03627"
+ /note="Autotransporter adhesin [Intracellular trafficking
+ and secretion / Extracellular structures]; Region: Hia;
+ COG5295"
+ /db_xref="CDD:227614"
+ misc_feature complement(3551756..3551944)
+ /locus_tag="SARI_03627"
+ /note="Xylella fastidiosa surface protein related; Region:
+ X_fast-SP_rel; pfam06669"
+ /db_xref="CDD:115332"
+ misc_feature complement(3550655..>3550828)
+ /locus_tag="SARI_03627"
+ /note="YadA-like C-terminal region; Region: YadA;
+ pfam03895"
+ /db_xref="CDD:217782"
+ gene 3555465..3555590
+ /locus_tag="SARI_03628"
+ CDS 3555465..3555590
+ /locus_tag="SARI_03628"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572582.1"
+ /db_xref="GI:161505470"
+ /translation="MVKISKPSQKVSQLLDNIDYYGCRHSDEALVEGYINQIFSI"
+ gene complement(3555653..3556477)
+ /locus_tag="SARI_03629"
+ CDS complement(3555653..3556477)
+ /locus_tag="SARI_03629"
+ /inference="protein motif:HMMPfam:IPR003786"
+ /inference="protein motif:HMMPIR:IPR003786"
+ /inference="protein motif:HMMTigr:IPR003786"
+ /inference="similar to AA sequence:REFSEQ:NP_462918.1"
+ /note="involved in the production or activity of formate
+ dehydrogenase-H which is active when nitrate is not
+ present during anaerobic growth"
+ /codon_start=1
+ /transl_table=11
+ /product="formate dehydrogenase accessory protein"
+ /protein_id="YP_001572583.1"
+ /db_xref="GI:161505471"
+ /db_xref="InterPro:IPR003786"
+ /translation="MSEEVLNVTNFTTSRQLTLWKRENLQHPQRDDVAEEVPVALVYN
+ GISHVVMMASPKDLTHFAMGFSLSEGIIESPRDIFGMDVVPSCNGLEVQIELSSRRFM
+ GLKERRRALAGRTGCGVCGVEQLNDIGKPVSPLPFSQIFNLGNLDRALKHLNDFQPTG
+ KLTGCTHAAAWVMPFGDLAGGHEDVGRHVALDKLLGRRAVEGERWRQGAVLVSSRASY
+ EMVQKSAMCGVEILFAVSAATTLAVEVAERCNLTLVGFCKPGRATVYTHPQRLIAE"
+ misc_feature complement(3555668..3556456)
+ /locus_tag="SARI_03629"
+ /note="formate dehydrogenase accessory protein; Reviewed;
+ Region: PRK00724"
+ /db_xref="CDD:234823"
+ gene 3556683..3559733
+ /locus_tag="SARI_03630"
+ /note="Pseudogene based on alignment with
+ gi|16764914|ref|NP_460529.1|"
+ gene 3559746..3560648
+ /locus_tag="SARI_03631"
+ CDS 3559746..3560648
+ /locus_tag="SARI_03631"
+ /inference="protein motif:HMMPfam:IPR001450"
+ /inference="protein motif:HMMTigr:IPR006470"
+ /inference="protein motif:ScanRegExp:IPR001450"
+ /inference="similar to AA sequence:REFSEQ:NP_462916.1"
+ /note="'KEGG: stm:STM4036 3.9e-169 fdoH; formate
+ dehydrogenase-O, Fe-S subunit K00124;
+ COG: COG0437 Fe-S-cluster-containing hydrogenase
+ components 1;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572584.1"
+ /db_xref="GI:161505472"
+ /db_xref="InterPro:IPR001450"
+ /db_xref="InterPro:IPR006470"
+ /translation="MAYQSQDIIRRSATNGFTPAPQARDHQEEVAKLIDVTTCIGCKA
+ CQVACSEWNDIRDEVGNNVGVYDNPADLTAKSWTVMRFSEVEQNDKLEWLIRKDGCMH
+ CADPGCLKACPAEGAIIQYANGIVDFQSEQCIGCGYCIAGCPFNVPRLNPEDNRVYKC
+ TLCVDRVVVGQEPACVKTCPTGAIHFGSKEDMKTLAGERVAELKTRGYDNAGLYDPAG
+ VGGTHVMYVLHHADKPNLYHGLPENPEISETVKFWKGVWKPLAAFGFAATFAASVFHY
+ VGVGPNRADEEDDNLHEEKDEVRK"
+ misc_feature 3559764..3560612
+ /locus_tag="SARI_03631"
+ /note="formate dehydrogenase, beta subunit, Fe-S
+ containing; Region: FDH-beta; TIGR01582"
+ /db_xref="CDD:233481"
+ misc_feature 3560481..3560612
+ /locus_tag="SARI_03631"
+ /note="Formate dehydrogenase N, transmembrane; Region:
+ Form-deh_trans; pfam09163"
+ /db_xref="CDD:192219"
+ gene 3560645..3561280
+ /locus_tag="SARI_03632"
+ CDS 3560645..3561280
+ /locus_tag="SARI_03632"
+ /inference="protein motif:HMMPfam:IPR011577"
+ /inference="protein motif:HMMTigr:IPR006471"
+ /inference="similar to AA sequence:INSD:AAX67831.1"
+ /note="cytochrome b556(FDO) component; heme containing"
+ /codon_start=1
+ /transl_table=11
+ /product="formate dehydrogenase-O subunit gamma"
+ /protein_id="YP_001572585.1"
+ /db_xref="GI:161505473"
+ /db_xref="InterPro:IPR006471"
+ /db_xref="InterPro:IPR011577"
+ /translation="MKRRDTIVRYTAPERINHWIVAFCFVLAAVSGLGFLFPSFNWLM
+ HIMGTPQLARILHPFVGVVMFASFIIMFFRYWHHNLINRDDIFWAKNIRKIVVNEEVG
+ DTGRYNFGQKCVFWAAIIFLVLLLVSGVIIWRPYFAPAFSIPVIRFALMLHSFAAVAL
+ IVVIMVHIYAALWVKGTITAMVEGWVTRSWAKKHHPRWYREVRKTTEKETE"
+ misc_feature 3560645..3561253
+ /locus_tag="SARI_03632"
+ /note="formate dehydrogenase-O subunit gamma; Provisional;
+ Region: PRK10639"
+ /db_xref="CDD:182608"
+ misc_feature 3560663..3561250
+ /locus_tag="SARI_03632"
+ /note="formate dehydrogenase, gamma subunit; Region:
+ formate-DH-gamm; TIGR01583"
+ /db_xref="CDD:130645"
+ gene 3561277..3562206
+ /locus_tag="SARI_03633"
+ CDS 3561277..3562206
+ /locus_tag="SARI_03633"
+ /inference="protein motif:HMMPfam:IPR006452"
+ /inference="protein motif:HMMPIR:IPR006452"
+ /inference="protein motif:HMMTigr:IPR006452"
+ /inference="protein motif:superfamily:IPR012282"
+ /inference="similar to AA sequence:REFSEQ:NP_462914.1"
+ /note="required for the formation of active formate
+ dehydrogenase"
+ /codon_start=1
+ /transl_table=11
+ /product="formate dehydrogenase accessory protein FdhE"
+ /protein_id="YP_001572586.1"
+ /db_xref="GI:161505474"
+ /db_xref="InterPro:IPR006452"
+ /db_xref="InterPro:IPR012282"
+ /translation="MSIRIIPQDELGSSEKRTADMIPPLLFPRLKNVYNRRAERLREL
+ AESNPLGDYLRFAALIAHAQEVVLYDHPLEMDLTARIKEANEQGKPPLDIHVLPRDKH
+ WQKLLHSLIAELKPEMSGPALAVIENLEKASDQELEQMASALFDSDFSYVSSDKAPFI
+ WAALSLYWAQMASLIPGKARAEYGEARQYCPVCGSMPVSSVVQIGTTQGLRYLHCNLC
+ ETEWHVVRVKCSNCEQSRDLHYWSLENEQAAVKTESCGDCGTYLKILYQEKDPKVEAV
+ ADDLASLVLDARMEQEGFARSSINPFLFPGEGE"
+ misc_feature 3561277..3562203
+ /locus_tag="SARI_03633"
+ /note="formate dehydrogenase accessory protein FdhE;
+ Provisional; Region: PRK03564"
+ /db_xref="CDD:179595"
+ misc_feature 3561280..3562191
+ /locus_tag="SARI_03633"
+ /note="formate dehydrogenase accessory protein FdhE;
+ Region: FdhE; TIGR01562"
+ /db_xref="CDD:130625"
+ gene complement(3562253..3562543)
+ /locus_tag="SARI_03634"
+ CDS complement(3562253..3562543)
+ /locus_tag="SARI_03634"
+ /inference="protein motif:HMMPfam:IPR001387"
+ /inference="protein motif:HMMSmart:IPR001387"
+ /inference="protein motif:superfamily:IPR010982"
+ /inference="similar to AA sequence:REFSEQ:NP_462913.2"
+ /note="'COG: COG2944 Predicted transcriptional regulator;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572587.1"
+ /db_xref="GI:161505475"
+ /db_xref="InterPro:IPR001387"
+ /db_xref="InterPro:IPR010982"
+ /translation="MDKVLFERLTQSMSQMNEIIEGTREPSRTFHIDAMKIKEIRQAS
+ GLSQSKFAELISVNVDTLRNWEQGRRSPTGPAKALLRAIANDPRNVIQALRY"
+ misc_feature complement(3562268..>3562507)
+ /locus_tag="SARI_03634"
+ /note="Predicted transcriptional regulator
+ [Transcription]; Region: COG2944"
+ /db_xref="CDD:225495"
+ misc_feature complement(3562289..3562438)
+ /locus_tag="SARI_03634"
+ /note="Helix-turn-helix XRE-family like proteins.
+ Prokaryotic DNA binding proteins belonging to the
+ xenobiotic response element family of transcriptional
+ regulators; Region: HTH_XRE; cd00093"
+ /db_xref="CDD:238045"
+ misc_feature complement(order(3562343..3562345,3562418..3562420,
+ 3562430..3562432))
+ /locus_tag="SARI_03634"
+ /note="non-specific DNA binding site [nucleotide binding];
+ other site"
+ /db_xref="CDD:238045"
+ misc_feature complement(order(3562346..3562348,3562421..3562423))
+ /locus_tag="SARI_03634"
+ /note="salt bridge; other site"
+ /db_xref="CDD:238045"
+ misc_feature complement(order(3562340..3562345,3562355..3562357,
+ 3562364..3562366,3562397..3562402))
+ /locus_tag="SARI_03634"
+ /note="sequence-specific DNA binding site [nucleotide
+ binding]; other site"
+ /db_xref="CDD:238045"
+ gene complement(3562544..3562855)
+ /locus_tag="SARI_03635"
+ CDS complement(3562544..3562855)
+ /locus_tag="SARI_03635"
+ /inference="similar to AA sequence:REFSEQ:NP_945170.1"
+ /note="'COG: COG2026 Cytotoxic translational repressor of
+ toxin-antitoxin stability system;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572588.1"
+ /db_xref="GI:161505476"
+ /translation="MQFIETELFTEDVKKLLDDDEYHKLQVFMAQHPDCGDVIQETGG
+ LRKMRWGARGKGKRSGVRIIYFHRSQRYEIRLLLIYQKGIKDDLMPQEKAVLRMLNER
+ W"
+ misc_feature complement(<3562559..>3562729)
+ /locus_tag="SARI_03635"
+ /note="Protein of unknown function (DUF1044); Region:
+ DUF1044; cl01955"
+ /db_xref="CDD:242799"
+ gene 3563073..3563987
+ /locus_tag="SARI_03636"
+ CDS 3563073..3563987
+ /locus_tag="SARI_03636"
+ /inference="protein motif:HMMPfam:IPR013094"
+ /inference="protein motif:ScanRegExp:IPR002168"
+ /inference="similar to AA sequence:INSD:AAL22871.1"
+ /note="'KEGG: eci:UTI89_C4473 3.6e-120 putative lipase
+ K01066;
+ COG: COG0657 Esterase/lipase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572589.1"
+ /db_xref="GI:161505477"
+ /db_xref="InterPro:IPR002168"
+ /db_xref="InterPro:IPR013094"
+ /translation="MPLEKGIAELVAGFIAAGRPSSREQNIDDRRAGYIVSTSLAGEK
+ EIRVKSEDIVLEGMTFRVVSPPNASGSLPCILYYHGGCFVSGGFLTHDPQLRQLAWKS
+ GCKVIAIQYRLAPEHTFPAAHDDAERGANIVHQYAEQLGIDRERITLAGDSAGGHLAL
+ VSALRLKSTAHWSPAKLLLIYPMLDATASFPSYASNGQDYIITRDTLLSGFEMYLHGT
+ DLRHPEASPIWREDFAGLPPVHILTAEFDPLRDEGEALYHRLNDQGVACTCQRYPGVI
+ HGFFQLGGVSKTARDAIRDVAWRAATRE"
+ misc_feature 3563256..>3563570
+ /locus_tag="SARI_03636"
+ /note="Esterases and lipases (includes fungal lipases,
+ cholinesterases, etc.) These enzymes act on carboxylic
+ esters (EC: 3.1.1.-). The catalytic apparatus involves
+ three residues (catalytic triad): a serine, a glutamate or
+ aspartate and a histidine.These...; Region:
+ Esterase_lipase; cd00312"
+ /db_xref="CDD:238191"
+ misc_feature 3563295..3563912
+ /locus_tag="SARI_03636"
+ /note="alpha/beta hydrolase fold; Region: Abhydrolase_3;
+ pfam07859"
+ /db_xref="CDD:219611"
+ misc_feature order(3563310..3563318,3563526..3563534,3563547..3563549)
+ /locus_tag="SARI_03636"
+ /note="substrate binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:238191"
+ gene complement(3564013..3565002)
+ /locus_tag="SARI_03637"
+ CDS complement(3564013..3565002)
+ /locus_tag="SARI_03637"
+ /inference="protein motif:HMMPfam:IPR000182"
+ /inference="protein motif:HMMTigr:IPR012660"
+ /inference="similar to AA sequence:INSD:AAL22868.1"
+ /note="'KEGG: eci:UTI89_C4472 1.1e-166 yiiD; putative
+ acetyltransferase K00633;
+ COG: COG0454 Histone acetyltransferase HPA2 and related
+ acetyltransferases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative acetyltransferase"
+ /protein_id="YP_001572590.1"
+ /db_xref="GI:161505478"
+ /db_xref="InterPro:IPR000182"
+ /db_xref="InterPro:IPR012660"
+ /translation="MSQLPAWPRITRESTAMYHLRVPQTEEELERYYQFRWEMLRKPL
+ HQPKGSERDGWDALAHHQMVVDEEGNLVAVGRLYINADNEASIRFMAVHPSVQAKGLG
+ TLMAMTLESVARQEGVKRVTCSAREDAVEFFAKLGFVNQGEITTPTTTPIRHFLMIKP
+ VASLDDILHRGDWCGQLQQAWYEHIPLSEKMGVRIQQYTGQKFITTMPETGNQNPHHT
+ VFAGSLFSLATLTGWGLIWLMLRERHLGGTIILADAHIRYSKPISGKPNAVADLGSLS
+ GDLDRLARGKKARVQLQVELLGGDTTGAIFEGIYIVLPAKPFGPYEEGGNEEE"
+ misc_feature complement(3564631..3564813)
+ /locus_tag="SARI_03637"
+ /note="N-Acyltransferase superfamily: Various enzymes that
+ characteristically catalyze the transfer of an acyl group
+ to a substrate; Region: NAT_SF; cd04301"
+ /db_xref="CDD:173926"
+ misc_feature complement(order(3564694..3564699,3564727..3564735))
+ /locus_tag="SARI_03637"
+ /note="Coenzyme A binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:173926"
+ misc_feature complement(3564061..3564483)
+ /locus_tag="SARI_03637"
+ /note="Putative thioesterase (yiiD_Cterm); Region:
+ YiiD_Cterm; pfam09500"
+ /db_xref="CDD:220269"
+ gene complement(3564999..3565436)
+ /locus_tag="SARI_03638"
+ CDS complement(3564999..3565436)
+ /locus_tag="SARI_03638"
+ /inference="protein motif:BlastProDom:IPR003732"
+ /inference="protein motif:HMMPanther:IPR003732"
+ /inference="protein motif:HMMPfam:IPR003732"
+ /inference="protein motif:HMMTigr:IPR003732"
+ /inference="protein motif:superfamily:IPR003732"
+ /inference="similar to AA sequence:REFSEQ:YP_152948.1"
+ /note="hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and
+ free tRNA(Tyr); possible defense mechanism against a
+ harmful effect of D-tyrosine"
+ /codon_start=1
+ /transl_table=11
+ /product="D-tyrosyl-tRNA(Tyr) deacylase"
+ /protein_id="YP_001572591.1"
+ /db_xref="GI:161505479"
+ /db_xref="InterPro:IPR003732"
+ /translation="MIALIQRVTRASVTVEDEVTGEIGPGLLVLLGVEKEDDEQKANR
+ LCERVLGYRIFSDADGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSGGAAPDRA
+ QALYEYFVGRCRQQAINTQTGRFAADMQVELVNDGPVTFWLQV"
+ misc_feature complement(3565002..3565436)
+ /locus_tag="SARI_03638"
+ /note="D-Tyrosyl-tRNAtyr deacylases; a class of
+ tRNA-dependent hydrolases which are capable of hydrolyzing
+ the ester bond of D-Tyrosyl-tRNA reducing the level of
+ cellular D-Tyrosine while recycling the peptidyl-tRNA;
+ found in bacteria and in eukaryotes but not...; Region:
+ Dtyr_deacylase; cd00563"
+ /db_xref="CDD:238316"
+ misc_feature complement(order(3565014..3565016,3565158..3565160,
+ 3565194..3565208,3565416..3565418))
+ /locus_tag="SARI_03638"
+ /note="putative active site [active]"
+ /db_xref="CDD:238316"
+ misc_feature complement(order(3565005..3565058,3565158..3565160,
+ 3565164..3565178,3565182..3565190,3565194..3565199,
+ 3565203..3565208,3565275..3565286,3565290..3565298,
+ 3565305..3565307))
+ /locus_tag="SARI_03638"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238316"
+ misc_feature complement(order(3565167..3565169,3565176..3565178,
+ 3565278..3565280,3565293..3565295))
+ /locus_tag="SARI_03638"
+ /note="putative tRNAtyr binding site [nucleotide binding];
+ other site"
+ /db_xref="CDD:238316"
+ gene complement(3565433..3566305)
+ /gene="rbn"
+ /locus_tag="SARI_03639"
+ CDS complement(3565433..3566305)
+ /gene="rbn"
+ /locus_tag="SARI_03639"
+ /inference="protein motif:HMMPfam:IPR004664"
+ /inference="protein motif:HMMTigr:IPR004664"
+ /inference="similar to AA sequence:REFSEQ:NP_458024.1"
+ /note="RNase BN; required for 3' maturation of certain
+ phage T4-encoded tRNAs; forms a dimer; specific for
+ immature tRNA substrates containing incorrect residues
+ within the universal CCA sequence; 3' to 5'
+ exoribonuclease"
+ /codon_start=1
+ /transl_table=11
+ /product="ribonuclease BN"
+ /protein_id="YP_001572592.1"
+ /db_xref="GI:161505480"
+ /db_xref="InterPro:IPR004664"
+ /translation="MLKTVHQKAGRHTRPVRAWLKLLWQRIDEDNMTTLAGNLAYVSL
+ LSLVPLIAVVFALFAAFPMFSDVSIQLRHFIFANFMPATGDVIQRYIEQFVANSNKMT
+ AVGACGLIVTALLLMYAIDSALNTIWRSKRTRPKVYSFAVYWMILTLGPLLAGASLAI
+ SSYLLSLRWASDLNTVIDNVLRVLPLLLSWISFWLLYSIVPTTRVPNRDAIVGAFVAA
+ LLFEAGKKGFALYITMFPSYQLIYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYR
+ KLKQAAEQEEADQP"
+ misc_feature complement(3565436..3566272)
+ /gene="rbn"
+ /locus_tag="SARI_03639"
+ /note="hypothetical protein; Reviewed; Region: PRK01637"
+ /db_xref="CDD:179313"
+ gene complement(3566299..3566898)
+ /locus_tag="SARI_03640"
+ CDS complement(3566299..3566898)
+ /locus_tag="SARI_03640"
+ /inference="protein motif:HMMPfam:IPR005834"
+ /inference="protein motif:HMMTigr:IPR006402"
+ /inference="similar to AA sequence:INSD:CAD09600.1"
+ /note="'KEGG: lil:LA1476 8.1e-11 putative haloacid
+ dehalogenase-like hydrolase K01560;
+ COG: COG1011 Predicted hydrolase (HAD superfamily);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphatase"
+ /protein_id="YP_001572593.1"
+ /db_xref="GI:161505481"
+ /db_xref="InterPro:IPR005834"
+ /db_xref="InterPro:IPR006402"
+ /translation="MLYIFDLGNVIVDIDFNRVLGVWSDLSRVPLASLKQKFTMGETF
+ HQHERGEITDEAFAEAFCHEMALSLSYEQFAHGWQAVFVGLRPEVIAIMHKLREQGHR
+ VVVLSNTNRLHTHFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQKEGFSAAD
+ AVFFDDNADNIEGANQLGITSILVKDKTTIPDYFAKLLC"
+ misc_feature complement(3566347..3566889)
+ /locus_tag="SARI_03640"
+ /note="haloacid dehalogenase superfamily, subfamily IA,
+ variant 3 with third motif having DD or ED; Region:
+ HAD-SF-IA-v3; TIGR01509"
+ /db_xref="CDD:233443"
+ misc_feature complement(3566347..3566646)
+ /locus_tag="SARI_03640"
+ /note="Haloacid dehalogenase-like hydrolases. The haloacid
+ dehalogenase-like (HAD) superfamily includes L-2-haloacid
+ dehalogenase, epoxide hydrolase, phosphoserine
+ phosphatase, phosphomannomutase, phosphoglycolate
+ phosphatase, P-type ATPase, and many others; Region:
+ HAD_like; cd01427"
+ /db_xref="CDD:119389"
+ misc_feature complement(3566578..3566580)
+ /locus_tag="SARI_03640"
+ /note="motif II; other site"
+ /db_xref="CDD:119389"
+ gene complement(3567089..3567898)
+ /locus_tag="SARI_03641"
+ CDS complement(3567089..3567898)
+ /locus_tag="SARI_03641"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR001034"
+ /inference="protein motif:HMMSmart:IPR001034"
+ /inference="protein motif:ScanRegExp:IPR001034"
+ /inference="similar to AA sequence:INSD:AAV79634.1"
+ /note="'COG: COG1349 Transcriptional regulators of sugar
+ metabolism;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572594.1"
+ /db_xref="GI:161505482"
+ /db_xref="InterPro:IPR001034"
+ /db_xref="InterPro:IPR011991"
+ /translation="MLMSLTELTGNPRHDRLLMLIDERGYMNIDELASLLEVSTQTVR
+ RDIRKLSEQGLITRHHGGAGRASSVVNTAFEQREVSWTQEKKAIAEAVADYIPDGSTI
+ FITIGTTVEQVARALLNHNHLRIITNSLRVAHILYNNPRFEVMVPGGTLRPHNSGIIG
+ PSATAFVAGFRADYLVTSVGAIESDGALLEFDVNEASVVKTMMAHSRHILLAADHTKY
+ HASAAVEIGNVSQITALFTDEYPGPALQNLLQFQQIEVVQVSPSLDDAVSA"
+ misc_feature complement(3567119..3567868)
+ /locus_tag="SARI_03641"
+ /note="Transcriptional regulators of sugar metabolism
+ [Transcription / Carbohydrate transport and metabolism];
+ Region: GlpR; COG1349"
+ /db_xref="CDD:224268"
+ misc_feature complement(<3567713..3567853)
+ /locus_tag="SARI_03641"
+ /note="Arsenical Resistance Operon Repressor and similar
+ prokaryotic, metal regulated homodimeric repressors. ARSR
+ subfamily of helix-turn-helix bacterial transcription
+ regulatory proteins (winged helix topology). Includes
+ several proteins that appear to...; Region: HTH_ARSR;
+ cd00090"
+ /db_xref="CDD:238042"
+ misc_feature complement(order(3567719..3567727,3567743..3567748,
+ 3567752..3567757,3567764..3567769,3567773..3567784,
+ 3567809..3567817))
+ /locus_tag="SARI_03641"
+ /note="putative DNA binding site [nucleotide binding];
+ other site"
+ /db_xref="CDD:238042"
+ misc_feature complement(order(3567806..3567808,3567815..3567817))
+ /locus_tag="SARI_03641"
+ /note="putative Zn2+ binding site [ion binding]; other
+ site"
+ /db_xref="CDD:238042"
+ misc_feature complement(3567182..3567655)
+ /locus_tag="SARI_03641"
+ /note="DeoR C terminal sensor domain; Region: DeoRC;
+ pfam00455"
+ /db_xref="CDD:201239"
+ gene complement(3567926..3568828)
+ /locus_tag="SARI_03642"
+ CDS complement(3567926..3568828)
+ /locus_tag="SARI_03642"
+ /inference="protein motif:FPrintScan:IPR002139"
+ /inference="protein motif:HMMPfam:IPR011611"
+ /inference="protein motif:ScanRegExp:IPR002173"
+ /inference="similar to AA sequence:REFSEQ:NP_462904.2"
+ /note="'KEGG: eci:UTI89_C4462 1.8e-100 yihV; hypothetical
+ sugar kinase YihV K00846;
+ COG: COG0524 Sugar kinases, ribokinase family;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative sugar kinase"
+ /protein_id="YP_001572595.1"
+ /db_xref="GI:161505483"
+ /db_xref="InterPro:IPR002139"
+ /db_xref="InterPro:IPR002173"
+ /db_xref="InterPro:IPR011611"
+ /translation="MTMVRIACVGITVMDRIYYVEGLPTEGGKYVAKRYTEVGGGPAA
+ TAAVAAAKLGAQVDFIGRVGDDDTGNSLLAELESLGVNTRYTRRYTQAMSSQSAIMVD
+ AKGERIIVNYPSPDLLPDADWLNDIDFSQWDVVLADVRWHDGAKQAFTLARQAGVMTV
+ LDGDITPQDISELVALSDHAAFSEPGLARLTGMSEAIDALKKAQMLTNGHVYVTRGSD
+ GCNWLEKAAVRHQPGFTVEVVDTTGAGDVFHGALAFGLASGYAIEEAVRFASGVAALK
+ CTRPGGRAGIPDCEQTRSFLSLFV"
+ misc_feature complement(3567941..3568816)
+ /locus_tag="SARI_03642"
+ /note="Sugar kinases, ribokinase family [Carbohydrate
+ transport and metabolism]; Region: RbsK; COG0524"
+ /db_xref="CDD:223598"
+ misc_feature complement(3567965..3568816)
+ /locus_tag="SARI_03642"
+ /note="Ribokinase-like subgroup B. Found in bacteria and
+ plants, this subgroup is part of the ribokinase/pfkB
+ superfamily. Its oligomerization state is unknown at this
+ time; Region: ribokinase_group_B; cd01945"
+ /db_xref="CDD:238920"
+ misc_feature complement(order(3568091..3568093,3568100..3568102,
+ 3568694..3568696))
+ /locus_tag="SARI_03642"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:238920"
+ misc_feature complement(order(3568010..3568012,3568019..3568021,
+ 3568085..3568087,3568094..3568099,3568106..3568108,
+ 3568187..3568189,3568280..3568282))
+ /locus_tag="SARI_03642"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238920"
+ gene 3568987..3569883
+ /locus_tag="SARI_03643"
+ CDS 3568987..3569883
+ /locus_tag="SARI_03643"
+ /inference="protein motif:HMMPfam:IPR006115"
+ /inference="protein motif:HMMPIR:IPR002204"
+ /inference="protein motif:ScanRegExp:IPR002204"
+ /inference="protein motif:superfamily:IPR008927"
+ /inference="similar to AA sequence:REFSEQ:YP_152944.1"
+ /note="'KEGG: spt:SPA3864 4.5e-152 yihU; putative
+ oxidoreductase K08318;
+ COG: COG2084 3-hydroxyisobutyrate dehydrogenase and
+ related beta-hydroxyacid dehydrogenases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative oxidoreductase"
+ /protein_id="YP_001572596.1"
+ /db_xref="GI:161505484"
+ /db_xref="InterPro:IPR002204"
+ /db_xref="InterPro:IPR006115"
+ /db_xref="InterPro:IPR008927"
+ /translation="MAVIAFIGLGQMGSPMASNLLKQGHQLSVFDVNPDAVQRLVDKG
+ AQPASSPAQATIGAEFVITMLPNGDLVRSVLFGEQGVCETLSREALVIDMSTIHPLQT
+ DKLIADMQSKGFSMMDVPVGRTSDNAITGTLLLLAGGTAEQVERATPVLMAMGNELVN
+ TGGPGMGIRVKLINNYMSIALNALSAEAAVLCEALGLSFDVALKVMNGTAAGKGHFTT
+ TWPNKVMKGDLSPAFMIDLAHKDLGIALDVANQLHVPMPLGAASREVYNLARAAGRGR
+ EDWSAILEQVRISAGLTANVKK"
+ misc_feature 3568987..3569874
+ /locus_tag="SARI_03643"
+ /note="NADH-dependent gamma-hydroxybutyrate dehydrogenase;
+ Provisional; Region: PRK15461"
+ /db_xref="CDD:185358"
+ misc_feature 3568996..>3569511
+ /locus_tag="SARI_03643"
+ /note="6-phosphogluconate dehydrogenase-like protein;
+ Reviewed; Region: PRK09599"
+ /db_xref="CDD:236582"
+ gene 3569906..3570784
+ /locus_tag="SARI_03644"
+ CDS 3569906..3570784
+ /locus_tag="SARI_03644"
+ /inference="protein motif:HMMPfam:IPR002915"
+ /inference="protein motif:superfamily:IPR011060"
+ /inference="similar to AA sequence:SwissProt:Q8Z2T5"
+ /note="'KEGG: eco:b3881 1.5e-135 yihT; predicted aldolase;
+ COG: COG3684 Tagatose-1,6-bisphosphate aldolase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative aldolase"
+ /protein_id="YP_001572597.1"
+ /db_xref="GI:161505485"
+ /db_xref="InterPro:IPR002915"
+ /db_xref="InterPro:IPR011060"
+ /translation="MNNYTIKDITRASGGFAMLAVDQREAMRLMFAAAGAKTPVADSM
+ LTDFKVNAAKILSPYASAVLLDQQFCYRQAVEQNAVAKSCAMIVAADDFIPGNGIPVD
+ NVVIDKKINAQAVKQDGAKALKLLVLWRSDEDAQQRLDMVKEFNELCHSNGLLSIIEP
+ VVRPPRCGDKFDREQAIIDAAKELGDSGADLYKVEMPLYGKGAQSDLLTASQRLNEHI
+ NMPWVILSSGVDEKLFPRAVRVAMEAGASGFLAGRAVWSSVIGLPDTELMLRDVSAPK
+ LQRLGEIVDEMMAKRR"
+ misc_feature 3569906..3570781
+ /locus_tag="SARI_03644"
+ /note="Tagatose-1,6-bisphosphate aldolase [Carbohydrate
+ transport and metabolism]; Region: LacD; COG3684"
+ /db_xref="CDD:226209"
+ misc_feature 3570482..3570484
+ /locus_tag="SARI_03644"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:188634"
+ gene 3570800..3572041
+ /locus_tag="SARI_03645"
+ CDS 3570800..3572041
+ /locus_tag="SARI_03645"
+ /inference="protein motif:Gene3D:IPR013330"
+ /inference="protein motif:HMMPfam:IPR010819"
+ /inference="protein motif:ScanRegExp:IPR001228"
+ /inference="protein motif:superfamily:IPR008928"
+ /inference="similar to AA sequence:REFSEQ:YP_152942.1"
+ /note="'KEGG: eco:b3880 4.5e-223 yihS; predicted
+ glucosamine isomerase;
+ COG: COG2942 N-acyl-D-glucosamine 2-epimerase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572598.1"
+ /db_xref="GI:161505486"
+ /db_xref="InterPro:IPR001228"
+ /db_xref="InterPro:IPR008928"
+ /db_xref="InterPro:IPR010819"
+ /db_xref="InterPro:IPR013330"
+ /translation="MKWFNTLSHNRWLEQETDRIFNFGKNAAVPTGFGWLGNKGQIKE
+ EMGTHLWITARMLHVYSVAASMGRPGAYDLVDHGIKAMNGALRDKKYGGWYACVNDQG
+ VVDASKQGYQHFFALLGAASAVTTGHPEARKLLDYAIEVIEKYFWSEEEQMCLESWDE
+ AFSKTEDYRGGNANMHAVEAFLIVYDVTHDRKWLDRALRIASVIIHDVARSGDYRVNE
+ HFDSQWNPIRDYNKDNPAHRFRAYGGTPGHWIEWGRLMLHLHAALEARSETPPAWLLE
+ DAKGLFHATIRDAWAPDGADGFVYSVDWDGKPIVRERVRWPIVEAMGTAYALYTLTGD
+ SQYEEWYQKWWDYCIKYLMDYENGSWWQELDADNKVTTKVWDGKQDIYHLLHCLVIPR
+ LPLAPGLAPAVAAGLLDINAK"
+ misc_feature 3570800..3571975
+ /locus_tag="SARI_03645"
+ /note="AGE domain; N-acyl-D-glucosamine 2-epimerase
+ domain; Responsible for intermediate epimerization during
+ biosynthesis of N-acetylneuraminic acid. Catalytic
+ mechanism is believed to be via nucleotide elimination and
+ readdition and is ATP modulated. AGE is...; Region: AGE;
+ cd00249"
+ /db_xref="CDD:238153"
+ misc_feature order(3570818..3570820,3570839..3570841,3570989..3570991,
+ 3571025..3571027)
+ /locus_tag="SARI_03645"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238153"
+ misc_feature order(3570950..3570952,3570962..3570964,3570971..3570973,
+ 3571130..3571132,3571142..3571144,3571151..3571153,
+ 3571313..3571315,3571322..3571327,3571334..3571336,
+ 3571541..3571543,3571550..3571552,3571559..3571564,
+ 3571742..3571747,3571757..3571759,3571931..3571933,
+ 3571943..3571948,3571955..3571957)
+ /locus_tag="SARI_03645"
+ /note="putative active cleft [active]"
+ /db_xref="CDD:238153"
+ gene 3572045..3572902
+ /locus_tag="SARI_03646"
+ CDS 3572045..3572902
+ /locus_tag="SARI_03646"
+ /inference="protein motif:HMMPfam:IPR008183"
+ /inference="protein motif:superfamily:IPR011013"
+ /inference="similar to AA sequence:INSD:AAL22859.1"
+ /note="'KEGG: eco:b3879 5.4e-85 yihR; predicted
+ aldose-1-epimerase K01785;
+ COG: COG2017 Galactose mutarotase and related enzymes;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572599.1"
+ /db_xref="GI:161505487"
+ /db_xref="InterPro:IPR008183"
+ /db_xref="InterPro:IPR011013"
+ /translation="MRMAVMHSGGKTIQLNAGRYQAKIVTVGAGLAELTHHGRHVVIP
+ HKPEEMPLAHLGKVLIPWPNRVANGCYHYNGKDYQLAVNDPISQAAIHGLLAWRDWQV
+ SYQSTSEASLTIFLPPSYGYPFALSSEVIYRLDAASGLHVLIRSQNIGDESAPYGAGA
+ HPYLTCNLQSIDSCVLTLPASEELPADRDFSASCLIGETRLDHAIKAAATPAEWEVRL
+ TCPTQNMSTFLRSNQPWLQIYTGEKLSRKGLAVEPMSCPPDAFNSGIALIHLAPKAIH
+ QLHFSIGCE"
+ misc_feature 3572102..3572890
+ /locus_tag="SARI_03646"
+ /note="Aldose 1-epimerase, similar to Escherichia coli
+ YihR; Region: Aldose_epim_Ec_YihR; cd09022"
+ /db_xref="CDD:185699"
+ misc_feature order(3572237..3572239,3572318..3572320,3572525..3572527,
+ 3572531..3572533,3572648..3572650,3572759..3572761,
+ 3572798..3572800)
+ /locus_tag="SARI_03646"
+ /note="active site"
+ /db_xref="CDD:185699"
+ misc_feature order(3572525..3572527,3572798..3572800)
+ /locus_tag="SARI_03646"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:185699"
+ gene 3572946..3574982
+ /locus_tag="SARI_03647"
+ CDS 3572946..3574982
+ /locus_tag="SARI_03647"
+ /inference="protein motif:HMMPfam:IPR000322"
+ /note="'KEGG: lil:LA2944 2.7e-129 Alpha-glucosidase II
+ K01187;
+ COG: COG1501 Alpha-glucosidases, family 31 of glycosyl
+ hydrolases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="alpha-glucosidase"
+ /protein_id="YP_001572600.1"
+ /db_xref="GI:161505488"
+ /db_xref="InterPro:IPR000322"
+ /translation="MNSLPQRSTDFELTTSQDGFALSWQQRLILRHSAENPCLWIGAG
+ VADIDMFRGNFSIKDKLNEKIALTEATVSELPDGWLVQFSRGATISATLRISADEAGR
+ LTLDLQNDDLHHNRIWLRLAANPDDHIYGCGEQFSYFDLRGKPFPLWTSEQGVGRNKT
+ SYVTWQADCKENAGGDYYWTFFPQPTFVSTQKYYCHVDNSCYMNFDFSAPEYHELALW
+ EDKTTLRFECADTYIALLEKLTALLGRQPELPDWVYDGVTLGIQGGTEVCQQKLDTMR
+ NAGVKVNGIWAQDWSGIRMTSFGKRVMWNWKWNSDNYPQLDSRIKQWKEEGVQFLSYI
+ NPYVASDKDLCAEAAKHGYLAKDATGGDYLVEFGEFYGGVVDLTNPEAYDWFKDVIKK
+ NMIALGCSGWMADFGEYLPTDTYLHNGVSAEIMHNAWPALWAKCNYEALQETGKLGEI
+ LFFMRAGYTGSQKYSTMMWAGDQNVDWSLDDGLASVVPAALSLAMTGHGLHHSDIGGY
+ TTLFDMKRSKELLLRWCDFSTFTPMMRTHEGNRPGDNWQFDGDAETIAHFARMTTVFT
+ TLKPYLKQAVAQNAATGLPVMRPLFLHYENDAATYTLKYQYLLGQDLLVAPVHEQGRS
+ DWTLYLPEDNWINIWTGEAHQGGEITVDAPIGKPPVFYRAKSEWASLFASLRNI"
+ misc_feature 3572946..3574979
+ /locus_tag="SARI_03647"
+ /note="alpha-glucosidase; Provisional; Region: PRK10426"
+ /db_xref="CDD:236691"
+ misc_feature 3573321..>3573428
+ /locus_tag="SARI_03647"
+ /note="Galactose mutarotase-like; Region: Gal_mutarotas_2;
+ pfam13802"
+ /db_xref="CDD:222390"
+ misc_feature 3573675..3574622
+ /locus_tag="SARI_03647"
+ /note="YihQ is a bacterial alpha-glucosidase with a
+ conserved glycosyl hydrolase family 31 (GH31) domain that
+ catalyzes the release of an alpha-glucosyl residue from
+ the non-reducing end of alpha-glucoside substrates such as
+ alpha-glucosyl fluoride. Orthologs...; Region:
+ GH31_glucosidase_YihQ; cd06594"
+ /db_xref="CDD:133125"
+ misc_feature order(3573807..3573809,3574158..3574160,3574308..3574310,
+ 3574350..3574352,3574359..3574361,3574467..3574469,
+ 3574554..3574556)
+ /locus_tag="SARI_03647"
+ /note="putative active site [active]"
+ /db_xref="CDD:133125"
+ misc_feature order(3574158..3574160,3574359..3574361)
+ /locus_tag="SARI_03647"
+ /note="putative catalytic site [active]"
+ /db_xref="CDD:133125"
+ gene 3575028..3576410
+ /locus_tag="SARI_03648"
+ CDS 3575028..3576410
+ /locus_tag="SARI_03648"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="protein motif:HMMTigr:IPR001927"
+ /inference="protein motif:ScanRegExp:IPR001927"
+ /inference="similar to AA sequence:REFSEQ:YP_152939.1"
+ /note="'KEGG: eci:UTI89_C4210 2.9e-47 yicJ; hypothetical
+ symporter YicJ K03292;
+ COG: COG2211 Na+/melibiose symporter and related
+ transporters;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572601.1"
+ /db_xref="GI:161505489"
+ /db_xref="InterPro:IPR001927"
+ /db_xref="InterPro:IPR011701"
+ /translation="MSQTSSNPATLRLPFKEKLAYGLGDLGSNILLDIGTLYLLKFYT
+ DVLGLPGTYGGIIFLIAKFFTAFTDMGTGIMLDSRRKIGPKGKFRPFVLYAAFPVTLL
+ AIANFVGTPFEVTGKTVVATILFMLYGLVFSMMNCSYGAMVPAITKNPDERASLAAWR
+ QGGATLGLLLCTVGFVPVMNLIEGNAQLSYIFAATLFSLFGLLFMWLCYAGVKERYVE
+ VKPVDNAQKPGLLQSFRAIAGNRPLFILCIANLCTLGAFNVKLAIQVYYTQYVLNDPI
+ LLSWMGFFSMGCIFIGVFLMPGAVRRFGKKKVYIGGLLIWVAGDLLNYFFGGGSVSFV
+ AFSCLAFFGSAFVNSLNWALVSDTVEYGEWRTGVRSEGTVYTGFTFFRKVSQALAGFF
+ PGWMLTQIGYIPNVVQSAGTVEGLRQLIFIYPCVLAVITIIAMGCFYNLNEKMYVRIV
+ EEIEARKHTV"
+ misc_feature 3575073..3576374
+ /locus_tag="SARI_03648"
+ /note="melibiose:sodium symporter; Provisional; Region:
+ PRK10429; cl15392"
+ /db_xref="CDD:199528"
+ misc_feature 3575079..3576395
+ /locus_tag="SARI_03648"
+ /note="sugar (Glycoside-Pentoside-Hexuronide) transporter;
+ Region: gph; TIGR00792"
+ /db_xref="CDD:233128"
+ gene 3576456..3577877
+ /locus_tag="SARI_03649"
+ CDS 3576456..3577877
+ /locus_tag="SARI_03649"
+ /inference="protein motif:HMMTigr:IPR001927"
+ /inference="protein motif:ScanRegExp:IPR001927"
+ /inference="similar to AA sequence:INSD:AAF27927.1"
+ /note="'KEGG: eci:UTI89_C4210 6.1e-45 yicJ; hypothetical
+ symporter YicJ K03292;
+ COG: COG2211 Na+/melibiose symporter and related
+ transporters;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572602.1"
+ /db_xref="GI:161505490"
+ /db_xref="InterPro:IPR001927"
+ /translation="MSNHDPLTLKLSLREKCAYGVGDFGSNLMLCIGTLYLLKFYTDE
+ LGMPAYYGGIIFLVAKFFTAFTDMLTGVLLDSRRNIGAKGKFRPFILYASFPVALVAT
+ AQFFATHFTLPVKTAFATVLFMLFGLFYSLMNCSYGAMVPAITKNPHERAQLAAWRQG
+ GATIGLLLCTVGFMPIQALFTRSPSLGYLIAAVIFSVCGLFSMWWCFSGVKERYIETV
+ PDTHKPSILKSFCAIFRNPPLLVLCVANLCTLAAFNIKLAIQVYYTQYVLNDIHLLSW
+ MGFFSMGCILIGVLLVPAAVKRFGKKQVYLGGLILWAVGDILNFIWGGTSFLFVIFSC
+ IAFFGTAFVNSLNWALVPDTVDYGEWKTGIRAEGSVYTGYTFSRKISAALAGFLPGIM
+ LTQIGYMPNIAQSDATLLGLRQLIFLWPCGLAIIAALTMGFFYKLNEQRFAFIIEEIA
+ QRKKTGNQTVATNNKQSISTVNN"
+ misc_feature 3576501..3577811
+ /locus_tag="SARI_03649"
+ /note="sugar (Glycoside-Pentoside-Hexuronide) transporter;
+ Region: gph; TIGR00792"
+ /db_xref="CDD:233128"
+ misc_feature 3576564..3577760
+ /locus_tag="SARI_03649"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature order(3576567..3576572,3576621..3576623,3576630..3576635,
+ 3576642..3576644,3576654..3576659,3576663..3576668,
+ 3576843..3576848,3576855..3576860,3576867..3576872,
+ 3576879..3576881,3576918..3576923,3576930..3576935,
+ 3576951..3576953,3577203..3577205,3577212..3577217,
+ 3577221..3577226,3577233..3577235,3577275..3577277,
+ 3577287..3577289,3577299..3577301,3577308..3577310,
+ 3577320..3577322,3577464..3577466,3577473..3577478,
+ 3577485..3577487,3577497..3577502,3577509..3577511,
+ 3577563..3577568,3577575..3577580,3577587..3577592,
+ 3577599..3577601)
+ /locus_tag="SARI_03649"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene 3577909..3578637
+ /gene="ompL"
+ /locus_tag="SARI_03650"
+ CDS 3577909..3578637
+ /gene="ompL"
+ /locus_tag="SARI_03650"
+ /inference="protein motif:HMMPfam:IPR009331"
+ /inference="similar to AA sequence:REFSEQ:YP_218894.1"
+ /note="porin involved in the transport of small molecular
+ weight solutes (up to 600 Daltons) across the cell wall;
+ specific substrate still unknown"
+ /codon_start=1
+ /transl_table=11
+ /product="outer membrane porin L"
+ /protein_id="YP_001572603.1"
+ /db_xref="GI:161505491"
+ /db_xref="InterPro:IPR009331"
+ /translation="MAASLHLKNGFIMKYLNTLVILTSVVSTSVFAGAYVENREAYNL
+ ASDQMEFMLRVGYNSDMGAGIMLTNTYTLQRDDELKHGYNEIEGWYPLFKPTDRLTIQ
+ PGGLINDKSIGSGGAVYLDVNYKFTPWFNLTVRNRYNHNSYSSTDLNGELDNNDSYEI
+ GNYWNFTITDKFSYTFEPHYFYNVNDFNSSNGTKHHWEITNTFRYRINEHWLPYFELR
+ WLDRNVGPYHREQNQIRIGAKYFF"
+ misc_feature 3577999..3578634
+ /gene="ompL"
+ /locus_tag="SARI_03650"
+ /note="outer membrane porin L; Provisional; Region: ompL;
+ PRK09980"
+ /db_xref="CDD:182179"
+ gene complement(3578711..3580534)
+ /locus_tag="SARI_03651"
+ CDS complement(3578711..3580534)
+ /locus_tag="SARI_03651"
+ /inference="protein motif:FPrintScan:IPR000795"
+ /inference="protein motif:Gene3D:IPR000640"
+ /inference="protein motif:HMMPfam:IPR000640"
+ /inference="protein motif:HMMPfam:IPR000795"
+ /inference="protein motif:HMMPfam:IPR004161"
+ /inference="protein motif:HMMTigr:IPR005225"
+ /inference="protein motif:HMMTigr:IPR006298"
+ /inference="protein motif:ScanRegExp:IPR000795"
+ /inference="protein motif:superfamily:IPR009000"
+ /inference="protein motif:superfamily:IPR009022"
+ /note="'KEGG: eci:UTI89_C4460 0. typA, bipA, yihK, yjhK;
+ putative GTP-binding factor K06207;
+ COG: COG1217 Predicted membrane GTPase involved in stress
+ response;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="GTP-binding protein"
+ /protein_id="YP_001572604.1"
+ /db_xref="GI:161505492"
+ /db_xref="InterPro:IPR000640"
+ /db_xref="InterPro:IPR000795"
+ /db_xref="InterPro:IPR004161"
+ /db_xref="InterPro:IPR005225"
+ /db_xref="InterPro:IPR006298"
+ /db_xref="InterPro:IPR009000"
+ /db_xref="InterPro:IPR009022"
+ /translation="MIENLRNIAIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMD
+ SNDLEKERGITILAKNTAIKWNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAF
+ DGPMPQTRFVTKKAFAHGLKPIVVINKVDRPGARPDWVVDQVFDLFVNLDATDEQLDF
+ PIIYASALNGIAGLDHEDMAEDMTPLYQAIVDHVPAPDVDLDGPFQMQISQLDYNNYV
+ GVIGIGRIKRGKVKPNQQVTIIDSEGKTRNAKVGKVLTHLGLERIDSNIAEAGDIIAI
+ TGLGELNISDTICDPQNVEALPALSVDEPTVSMFFCVNTSPFCGKEGKFVTSRQILDR
+ LNKELVHNVALRVEETEDADAFRVSGRGELHLSVLIENMRREGFELAVSRPKVIFREI
+ DGRKQEPYENVTLDVEEQHQGSVMQALGERKGDLKNMNPDGKGRVRLDYVIPSRGLIG
+ FRSEFMTMTSGTGLLYSTFSHYDDIRPGEVGQRQNGVLISNGQGKAVAFALFGLQDRG
+ KLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKLTNMRASGTDEAVILVPPIKMSLE
+ QALEFIDDDELVEVTPTSIRIRKRHLTENDRRRANRGQKEE"
+ misc_feature complement(3578714..3580534)
+ /locus_tag="SARI_03651"
+ /note="GTP-binding protein; Provisional; Region: PRK10218"
+ /db_xref="CDD:104396"
+ misc_feature complement(3579944..3580525)
+ /locus_tag="SARI_03651"
+ /note="Tyrosine phosphorylated protein A (TypA)/BipA
+ family belongs to ribosome-binding GTPases; Region:
+ TypA_BipA; cd01891"
+ /db_xref="CDD:206678"
+ misc_feature complement(3580478..3580501)
+ /locus_tag="SARI_03651"
+ /note="G1 box; other site"
+ /db_xref="CDD:206678"
+ misc_feature complement(order(3580106..3580108,3580118..3580120,
+ 3580226..3580231,3580298..3580303,3580355..3580360,
+ 3580454..3580459,3580466..3580468,3580475..3580480,
+ 3580490..3580492,3580496..3580498))
+ /locus_tag="SARI_03651"
+ /note="putative GEF interaction site [polypeptide
+ binding]; other site"
+ /db_xref="CDD:206678"
+ misc_feature complement(order(3580031..3580039,3580142..3580144,
+ 3580148..3580153,3580475..3580492))
+ /locus_tag="SARI_03651"
+ /note="GTP/Mg2+ binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:206678"
+ misc_feature complement(3580358..3580393)
+ /locus_tag="SARI_03651"
+ /note="Switch I region; other site"
+ /db_xref="CDD:206678"
+ misc_feature complement(3580370..3580372)
+ /locus_tag="SARI_03651"
+ /note="G2 box; other site"
+ /db_xref="CDD:206678"
+ misc_feature complement(3580304..3580315)
+ /locus_tag="SARI_03651"
+ /note="G3 box; other site"
+ /db_xref="CDD:206678"
+ misc_feature complement(3580253..3580309)
+ /locus_tag="SARI_03651"
+ /note="Switch II region; other site"
+ /db_xref="CDD:206678"
+ misc_feature complement(3580142..3580153)
+ /locus_tag="SARI_03651"
+ /note="G4 box; other site"
+ /db_xref="CDD:206678"
+ misc_feature complement(3580031..3580039)
+ /locus_tag="SARI_03651"
+ /note="G5 box; other site"
+ /db_xref="CDD:206678"
+ misc_feature complement(3579665..3579922)
+ /locus_tag="SARI_03651"
+ /note="BipA_TypA_II: domain II of BipA (also called TypA)
+ having homology to domain II of the elongation factors
+ (EFs) EF-G and EF-Tu. BipA is a highly conserved protein
+ with global regulatory properties in Escherichia coli.
+ BipA is phosphorylated on a...; Region: BipA_TypA_II;
+ cd03691"
+ /db_xref="CDD:239662"
+ misc_feature complement(3579107..3579343)
+ /locus_tag="SARI_03651"
+ /note="BipA_TypA_C: a C-terminal portion of BipA or TypA
+ having homology to the C terminal domains of the
+ elongation factors EF-G and EF-2. A member of the ribosome
+ binding GTPase superfamily, BipA is widely distributed in
+ bacteria and plants. BipA is a highly...; Region:
+ BipA_TypA_C; cd03710"
+ /db_xref="CDD:239681"
+ gene 3580909..3582318
+ /gene="glnA"
+ /locus_tag="SARI_03652"
+ CDS 3580909..3582318
+ /gene="glnA"
+ /locus_tag="SARI_03652"
+ /inference="protein motif:BlastProDom:IPR008146"
+ /inference="protein motif:HMMPfam:IPR008146"
+ /inference="protein motif:HMMPfam:IPR008147"
+ /inference="protein motif:HMMTigr:IPR004809"
+ /inference="protein motif:ScanRegExp:IPR001637"
+ /inference="protein motif:ScanRegExp:IPR008146"
+ /inference="protein motif:ScanRegExp:IPR008147"
+ /inference="protein motif:superfamily:IPR008147"
+ /inference="similar to AA sequence:INSD:ABF05661.1"
+ /note="forms a homododecamer; forms glutamine from ammonia
+ and glutamate with the conversion of ATP to ADP and
+ phosphate; also functions in the assimilation of ammonia;
+ highly regulated protein controlled by the
+ addition/removal of adenylyl groups by adenylyltransferase
+ from specific tyrosine residues; addition of adenylyl
+ groups results in inactivation of the enzyme"
+ /codon_start=1
+ /transl_table=11
+ /product="glutamine synthetase"
+ /protein_id="YP_001572605.1"
+ /db_xref="GI:161505493"
+ /db_xref="InterPro:IPR001637"
+ /db_xref="InterPro:IPR004809"
+ /db_xref="InterPro:IPR008146"
+ /db_xref="InterPro:IPR008147"
+ /translation="MSAEHVLTMLNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNAEFF
+ EEGKMFDGSSIGGWKGINESDMVLMPDASTAVIDPFFADSTLIIRCDILEPGTLQGYD
+ RDPRSIAKRAEDYLRATGIADTVLFGPEPEFFLFDDIRFGTSISGSHVAIDDIEGAWN
+ SSTQYEGGNKGHRPAVKGGYFPVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAG
+ QNEVATRFNTMTKKADEIQIYKYVVHNVAHRFGKTATFMPKPMFGDNGSGMHCHMSLS
+ RNGVNLFSGDKYAGLSEQALYYIGGVIKHAKAINALANPTTNSYKRLVPGYEAPVMLA
+ YSARNRSASIRIPVVASPKARRIEVRFPDPAANPYLCFAALLMAGLDGIKNKIHPGEA
+ MDKNLYDLPPEEAKEIPQVAGSLEEALNALDLDREFLKAGGVFTDEAIDAYIALRREE
+ DDRVRMTPHPVEFELYYSV"
+ misc_feature 3580909..3582315
+ /gene="glnA"
+ /locus_tag="SARI_03652"
+ /note="glutamine synthetase; Provisional; Region: glnA;
+ PRK09469"
+ /db_xref="CDD:181884"
+ misc_feature 3580948..3581193
+ /gene="glnA"
+ /locus_tag="SARI_03652"
+ /note="Glutamine synthetase, beta-Grasp domain; Region:
+ Gln-synt_N; pfam03951"
+ /db_xref="CDD:217811"
+ misc_feature 3581212..3582045
+ /gene="glnA"
+ /locus_tag="SARI_03652"
+ /note="Glutamine synthetase, catalytic domain; Region:
+ Gln-synt_C; pfam00120"
+ /db_xref="CDD:215731"
+ gene 3582592..3583641
+ /gene="glnL"
+ /locus_tag="SARI_03653"
+ CDS 3582592..3583641
+ /gene="glnL"
+ /locus_tag="SARI_03653"
+ /inference="protein motif:Gene3D:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003661"
+ /inference="protein motif:HMMPfam:IPR013656"
+ /inference="protein motif:HMMSmart:IPR000014"
+ /inference="protein motif:HMMSmart:IPR003594"
+ /inference="protein motif:HMMSmart:IPR003661"
+ /inference="protein motif:superfamily:IPR003594"
+ /inference="protein motif:superfamily:IPR009082"
+ /inference="similar to AA sequence:INSD:CAD03094.1"
+ /note="sensory histidine kinase in two-component
+ regulatory system with GlnG; acts as a signal transducer
+ which responds to the nitrogen level of cell and modulates
+ the activity of ntrC by phosphorylation/dephosphorylation"
+ /codon_start=1
+ /transl_table=11
+ /product="nitrogen regulation protein NR(II)"
+ /protein_id="YP_001572606.1"
+ /db_xref="GI:161505494"
+ /db_xref="InterPro:IPR000014"
+ /db_xref="InterPro:IPR003594"
+ /db_xref="InterPro:IPR003661"
+ /db_xref="InterPro:IPR009082"
+ /db_xref="InterPro:IPR013656"
+ /translation="MATGMRPDAGQILNSLINSVLVVDDALAIHYANPAAQQLLAQSS
+ RKLFGTPLPELLSYFSLNIDLMGESLAAGQGFTDNEVTLVIDSRSHILSLTAQRLPDG
+ FILLEMTPMDNQRRLSQEQLQHAQQIAARDLVRGLAHEIKNPLGGLRGAAQLLSKALP
+ DPSLTEYTKVIIEQADRLRNLVDRLLGPQHPGMHITESIHKVAERVVTLVSMELPDNI
+ RLIRDYDPSLPELPHDPEQIEQVLLNIVRNALQALGSEGGEITLRTRTAFQLTLHGER
+ YRLAARIDVEDNGPGIPPHLQDTLFYPMVSGREGGTGLGLSIARNLIDQHAGKIEFTS
+ WPGHTEFSVYLPIRK"
+ misc_feature 3582592..3583635
+ /gene="glnL"
+ /locus_tag="SARI_03653"
+ /note="nitrogen regulation protein NR(II); Provisional;
+ Region: glnL; PRK11073"
+ /db_xref="CDD:182947"
+ misc_feature 3582622..>3582759
+ /gene="glnL"
+ /locus_tag="SARI_03653"
+ /note="PAS domain; Region: PAS; smart00091"
+ /db_xref="CDD:214512"
+ misc_feature order(3582685..3582687,3582697..3582699,3582715..3582717,
+ 3582754..3582765,3582838..3582840,3582850..3582852)
+ /gene="glnL"
+ /locus_tag="SARI_03653"
+ /note="putative active site [active]"
+ /db_xref="CDD:238075"
+ misc_feature order(3582745..3582747,3582757..3582759,3582778..3582780,
+ 3582787..3582792,3582871..3582873,3582877..3582879)
+ /gene="glnL"
+ /locus_tag="SARI_03653"
+ /note="heme pocket [chemical binding]; other site"
+ /db_xref="CDD:238075"
+ misc_feature 3582982..3583149
+ /gene="glnL"
+ /locus_tag="SARI_03653"
+ /note="Histidine Kinase A (dimerization/phosphoacceptor)
+ domain; Histidine Kinase A dimers are formed through
+ parallel association of 2 domains creating 4-helix
+ bundles; usually these domains contain a conserved His
+ residue and are activated via...; Region: HisKA; cd00082"
+ /db_xref="CDD:119399"
+ misc_feature order(3582988..3582990,3583000..3583002,3583012..3583014,
+ 3583021..3583023,3583033..3583035,3583042..3583044,
+ 3583090..3583092,3583102..3583104,3583111..3583113,
+ 3583123..3583125,3583132..3583134,3583144..3583146)
+ /gene="glnL"
+ /locus_tag="SARI_03653"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119399"
+ misc_feature 3583006..3583008
+ /gene="glnL"
+ /locus_tag="SARI_03653"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:119399"
+ misc_feature 3583303..3583626
+ /gene="glnL"
+ /locus_tag="SARI_03653"
+ /note="Histidine kinase-like ATPases; This family includes
+ several ATP-binding proteins for example: histidine
+ kinase, DNA gyrase B, topoisomerases, heat shock protein
+ HSP90, phytochrome-like ATPases and DNA mismatch repair
+ proteins; Region: HATPase_c; cd00075"
+ /db_xref="CDD:238030"
+ misc_feature order(3583321..3583323,3583333..3583335,3583342..3583344,
+ 3583444..3583446,3583450..3583452,3583456..3583458,
+ 3583462..3583467,3583528..3583539,3583585..3583587,
+ 3583591..3583593,3583606..3583608,3583612..3583614)
+ /gene="glnL"
+ /locus_tag="SARI_03653"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature 3583333..3583335
+ /gene="glnL"
+ /locus_tag="SARI_03653"
+ /note="Mg2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature order(3583456..3583458,3583462..3583464,3583528..3583530,
+ 3583534..3583536)
+ /gene="glnL"
+ /locus_tag="SARI_03653"
+ /note="G-X-G motif; other site"
+ /db_xref="CDD:238030"
+ gene 3583650..3585059
+ /gene="glnG"
+ /locus_tag="SARI_03654"
+ CDS 3583650..3585059
+ /gene="glnG"
+ /locus_tag="SARI_03654"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:FPrintScan:IPR002197"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR001789"
+ /inference="protein motif:HMMPfam:IPR002078"
+ /inference="protein motif:HMMPfam:IPR002197"
+ /inference="protein motif:HMMSmart:IPR001789"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR010114"
+ /inference="protein motif:ScanRegExp:IPR002078"
+ /inference="protein motif:superfamily:IPR011006"
+ /inference="similar to AA sequence:REFSEQ:YP_218884.1"
+ /note="response regulator of a two-component regulatory
+ system involved in the activation of nitrogen assimilation
+ genes; interacts with sigma-54"
+ /codon_start=1
+ /transl_table=11
+ /product="nitrogen regulation protein NR(I)"
+ /protein_id="YP_001572607.1"
+ /db_xref="GI:161505495"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR002078"
+ /db_xref="InterPro:IPR002197"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR010114"
+ /db_xref="InterPro:IPR011006"
+ /db_xref="InterPro:IPR012287"
+ /translation="MQRGIVWVVDDDSSIRWVLERALAGAGLTCIAFENGNEALAALA
+ SKTPDVLLSDIRMPGMDGLALLKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYL
+ PKPFDIDEAVALVERAISHYQEQQQPRNIEVNGPTTDMIGEAPAMQDVFRIIGRLSRS
+ SISVLINGESGTGKELVAHALHRHSPRANAPFIALNMAAIPKDLIESELFGHEKGAFT
+ GANTIRQGRFEQADGGTLFLDEIGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRI
+ IAATHQNLELRVQEGKFREDLFHRLNVIRIHLPPLRERREDIPRLARHFLQVAAHELG
+ VEAKLLHPETETALTRLAWPGNVRQLENTCRWLTVMAAGQEVLIQDLPGELFEASAPD
+ SSSHLPPDSWATLLAQWADRALRAGHQNLLYEAQTELERTLLTTALRHTLGHKQEAAR
+ LLGWGRNTLTRKLKELGMG"
+ misc_feature 3583650..3585053
+ /gene="glnG"
+ /locus_tag="SARI_03654"
+ /note="nitrogen regulation protein NR(I); Provisional;
+ Region: glnG; PRK10923"
+ /db_xref="CDD:182842"
+ misc_feature 3583671..3584006
+ /gene="glnG"
+ /locus_tag="SARI_03654"
+ /note="Signal receiver domain; originally thought to be
+ unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
+ recently identified in eukaroytes ETR1 Arabidopsis
+ thaliana; this domain receives the signal from the sensor
+ partner in a two-component systems; Region: REC; cd00156"
+ /db_xref="CDD:238088"
+ misc_feature order(3583677..3583682,3583809..3583811,3583833..3583835,
+ 3583893..3583895,3583950..3583952,3583959..3583964)
+ /gene="glnG"
+ /locus_tag="SARI_03654"
+ /note="active site"
+ /db_xref="CDD:238088"
+ misc_feature 3583809..3583811
+ /gene="glnG"
+ /locus_tag="SARI_03654"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238088"
+ misc_feature order(3583818..3583823,3583827..3583835)
+ /gene="glnG"
+ /locus_tag="SARI_03654"
+ /note="intermolecular recognition site; other site"
+ /db_xref="CDD:238088"
+ misc_feature 3583959..3583967
+ /gene="glnG"
+ /locus_tag="SARI_03654"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238088"
+ misc_feature 3584151..3584579
+ /gene="glnG"
+ /locus_tag="SARI_03654"
+ /note="The AAA+ (ATPases Associated with a wide variety of
+ cellular Activities) superfamily represents an ancient
+ group of ATPases belonging to the ASCE (for additional
+ strand, catalytic E) division of the P-loop NTPase fold.
+ The ASCE division also includes ABC; Region: AAA; cd00009"
+ /db_xref="CDD:99707"
+ misc_feature 3584151..3584174
+ /gene="glnG"
+ /locus_tag="SARI_03654"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature order(3584154..3584177,3584364..3584366,3584490..3584492)
+ /gene="glnG"
+ /locus_tag="SARI_03654"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:99707"
+ misc_feature 3584352..3584369
+ /gene="glnG"
+ /locus_tag="SARI_03654"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature 3584547..3584549
+ /gene="glnG"
+ /locus_tag="SARI_03654"
+ /note="arginine finger; other site"
+ /db_xref="CDD:99707"
+ misc_feature <3584976..3585047
+ /gene="glnG"
+ /locus_tag="SARI_03654"
+ /note="Bacterial regulatory protein, Fis family; Region:
+ HTH_8; pfam02954"
+ /db_xref="CDD:202485"
+ gene 3585089..3585283
+ /locus_tag="SARI_03655"
+ CDS 3585089..3585283
+ /locus_tag="SARI_03655"
+ /note="'Psort location: extracellular, including cell
+ wall, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572608.1"
+ /db_xref="GI:161505496"
+ /translation="MSVKRCYFALYCSDEFSMIMPGNRGRFIMLESIINLVSSGVVDS
+ HTPQTAIAAVLCAALVELFS"
+ unsure 3585166..3585328
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(3585334..3586707)
+ /locus_tag="SARI_03656"
+ CDS complement(3585334..3586707)
+ /locus_tag="SARI_03656"
+ /inference="protein motif:HMMPfam:IPR007197"
+ /inference="protein motif:HMMPfam:IPR010723"
+ /inference="protein motif:HMMSmart:IPR006638"
+ /inference="protein motif:HMMTigr:IPR004558"
+ /inference="similar to AA sequence:INSD:AAA19690.1"
+ /note="catalyzes the oxygen-independent formation of
+ protoporphyrinogen-IX from coproporphyrinogen-III"
+ /codon_start=1
+ /transl_table=11
+ /product="coproporphyrinogen III oxidase"
+ /protein_id="YP_001572609.1"
+ /db_xref="GI:161505497"
+ /db_xref="InterPro:IPR004558"
+ /db_xref="InterPro:IPR006638"
+ /db_xref="InterPro:IPR007197"
+ /db_xref="InterPro:IPR010723"
+ /translation="MSEQQIDWDLALIQKYNYSGPRYTSYPTALEFAEDFEEAAFSQA
+ VARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAPLFAG
+ RQVSQLHWGGGTPTYLNKAQISRLMTLLRENFHFNTDAEISIEIDPREIELDVLDHLR
+ AEGFNRLSMGVQDFNKEVQRLVNREQDEELIFMLLNHARNIGFTSTNIDLIYGLPKQT
+ PESFAFTLQRVTELNPDRLSVFNYAHLPTLFAAQRKIKNTDLPSAQQKLDILQETIVS
+ LTQAGYQFIGMDHFARPDDELAVAQREGALHRNFQGYTTQGDTDLLGMGVSAISMIGD
+ GYMQNQKELKRYYQQVNARGNALWRGITLTRDDCIRRDVIKALICNFRLDFSAVEQQW
+ GLHFAEYFTEDLQLLAPLAKDGLVDVNEKGIQVTPKGRLLIRNICMCFDAYLRQKARM
+ QQFSRVI"
+ misc_feature complement(3585337..3586698)
+ /locus_tag="SARI_03656"
+ /note="coproporphyrinogen III oxidase; Provisional;
+ Region: PRK09249"
+ /db_xref="CDD:236430"
+ misc_feature complement(3585967..3586524)
+ /locus_tag="SARI_03656"
+ /note="Radical SAM superfamily. Enzymes of this family
+ generate radicals by combining a 4Fe-4S cluster and
+ S-adenosylmethionine (SAM) in close proximity. They are
+ characterized by a conserved CxxxCxxC motif, which
+ coordinates the conserved iron-sulfur cluster; Region:
+ Radical_SAM; cd01335"
+ /db_xref="CDD:100105"
+ misc_feature complement(order(3585982..3585987,3586075..3586077,
+ 3586198..3586200,3586267..3586275,3586366..3586371,
+ 3586375..3586377,3586498..3586506,3586510..3586512,
+ 3586516..3586518,3586522..3586524))
+ /locus_tag="SARI_03656"
+ /note="FeS/SAM binding site; other site"
+ /db_xref="CDD:100105"
+ misc_feature complement(3585415..3585621)
+ /locus_tag="SARI_03656"
+ /note="HemN C-terminal domain; Region: HemN_C; pfam06969"
+ /db_xref="CDD:203555"
+ unsure 3586398..3586588
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(3586896..3587408)
+ /locus_tag="SARI_03657"
+ CDS complement(3586896..3587408)
+ /locus_tag="SARI_03657"
+ /inference="protein motif:HMMPfam:IPR007336"
+ /inference="similar to AA sequence:SwissProt:P0A2N9"
+ /note="'COG: COG3078 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572610.1"
+ /db_xref="GI:161505498"
+ /db_xref="InterPro:IPR007336"
+ /translation="MKKPTSAPRSKAFGKQRRKTREELNQEARDRKRLKKHRGHAPGS
+ RAAGGKPASGGGNQNQQKDPRIGSKTPIPLGVTEKVTQQHKPKSEKLMLSPQAELDLL
+ ETDERLDALLERLEAGETLNAEDQAWVDAKLDRIDELMQKLGLSYDDEEDEEEDEKQE
+ DMMRLLRGGN"
+ misc_feature complement(3586968..3587405)
+ /locus_tag="SARI_03657"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG3078"
+ /db_xref="CDD:225620"
+ gene complement(3587466..3587720)
+ /locus_tag="SARI_03658"
+ misc_RNA complement(3587466..3587720)
+ /locus_tag="SARI_03658"
+ /product="CsrC RNA family"
+ /inference="nucleotide motif:Rfam:RF00084"
+ /note="Rfam score 247.41"
+ gene 3588027..3588623
+ /locus_tag="SARI_03659"
+ CDS 3588027..3588623
+ /locus_tag="SARI_03659"
+ /inference="protein motif:HMMPfam:IPR002917"
+ /inference="protein motif:HMMTigr:IPR005289"
+ /inference="similar to AA sequence:INSD:AAO71121.1"
+ /note="'KEGG: reh:H16_A3452 1.1e-36 predicted GTPase
+ K01529;
+ COG: COG0218 Predicted GTPase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572611.1"
+ /db_xref="GI:161505499"
+ /db_xref="InterPro:IPR002917"
+ /db_xref="InterPro:IPR005289"
+ /translation="MSAPDIRHLPSDSGIEVAFAGRSNAGKSSALNTLTNQKSLARTS
+ KTPGRTQLINLFEVVDGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVV
+ LMDIRHPLKDLDQQMIQWAVESNIQVLVLLTKADKLASGARKAQLNIVREAVLAFNGD
+ VQVEAFSSLKKQGVDKLRQKLDSWFSELAPVEETQGTE"
+ misc_feature 3588072..3588581
+ /locus_tag="SARI_03659"
+ /note="YihA (EngB) GTPase family; Region: YihA_EngB;
+ cd01876"
+ /db_xref="CDD:206665"
+ misc_feature 3588087..3588110
+ /locus_tag="SARI_03659"
+ /note="G1 box; other site"
+ /db_xref="CDD:206665"
+ misc_feature order(3588093..3588113,3588153..3588161,3588168..3588176,
+ 3588222..3588224,3588426..3588428,3588432..3588434,
+ 3588525..3588530)
+ /locus_tag="SARI_03659"
+ /note="GTP/Mg2+ binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:206665"
+ misc_feature 3588165..3588185
+ /locus_tag="SARI_03659"
+ /note="Switch I region; other site"
+ /db_xref="CDD:206665"
+ misc_feature 3588174..3588176
+ /locus_tag="SARI_03659"
+ /note="G2 box; other site"
+ /db_xref="CDD:206665"
+ misc_feature 3588222..3588233
+ /locus_tag="SARI_03659"
+ /note="G3 box; other site"
+ /db_xref="CDD:206665"
+ misc_feature order(3588231..3588242,3588261..3588305,3588312..3588317)
+ /locus_tag="SARI_03659"
+ /note="Switch II region; other site"
+ /db_xref="CDD:206665"
+ misc_feature 3588423..3588434
+ /locus_tag="SARI_03659"
+ /note="G4 box; other site"
+ /db_xref="CDD:206665"
+ misc_feature 3588525..3588533
+ /locus_tag="SARI_03659"
+ /note="G5 box; other site"
+ /db_xref="CDD:206665"
+ gene complement(3588720..3588839)
+ /locus_tag="SARI_03660"
+ misc_RNA complement(3588720..3588839)
+ /locus_tag="SARI_03660"
+ /product="Spot 42 RNA"
+ /inference="nucleotide motif:Rfam:RF00021"
+ /note="Rfam score 118.43"
+ gene complement(3588978..3591764)
+ /locus_tag="SARI_03661"
+ CDS complement(3588978..3591764)
+ /locus_tag="SARI_03661"
+ /inference="protein motif:HMMPfam:IPR001098"
+ /inference="protein motif:HMMPfam:IPR002421"
+ /inference="protein motif:HMMPfam:IPR002562"
+ /inference="protein motif:HMMSmart:IPR001098"
+ /inference="protein motif:HMMSmart:IPR002421"
+ /inference="protein motif:HMMSmart:IPR002562"
+ /inference="protein motif:HMMSmart:IPR008918"
+ /inference="protein motif:HMMTigr:IPR002298"
+ /inference="protein motif:ScanRegExp:IPR001098"
+ /inference="protein motif:superfamily:IPR008918"
+ /inference="protein motif:superfamily:IPR012337"
+ /note="'has 3'-5' exonuclease, 5'-3' exonuclease and
+ 5'-3'polymerase activities, primarily functions to fill
+ gaps during DNA replication and repair'"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA polymerase I"
+ /protein_id="YP_001572612.1"
+ /db_xref="GI:161505500"
+ /db_xref="InterPro:IPR001098"
+ /db_xref="InterPro:IPR002298"
+ /db_xref="InterPro:IPR002421"
+ /db_xref="InterPro:IPR002562"
+ /db_xref="InterPro:IPR008918"
+ /db_xref="InterPro:IPR012337"
+ /translation="MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLN
+ MLRSLIMQYQPTHAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAM
+ GLPLLAVSGVEADDVIGTLAREAEKVGRPVLISTGDKDMAQLVTPNITLINTMTNTIL
+ GPDEVVNKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEP
+ EKIAGLTFRGAKTMAGKLAQNKEVAYLSYKLATIKTDVELELTCEQLEVQQPIAHELL
+ GLFKEYEFKRWTADVESGKWLQAKGAKPTAKPQETVIIDESPCELKAALSYENYVTIL
+ DESTLESWIEKLKKAPVFAFDTETDSLDNIAANLVGLSFAIEPGVAAYVPVAHDYLDA
+ PDQISRQRALELLKPLLEDDKVRKVGQNLKYDRGVLQNYGIELRGIAFDTMLESYILN
+ SVAGRHDMDSLSDRWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQL
+ HLKMWPELQQHKGPLNVFENIEMPLVPVLSRVERNGVKIDPAVLHKHSEEITLRLAEL
+ EKKAHDIAGEAFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLP
+ KVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVR
+ NDEGRRIRQAFIAPEDYLIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAE
+ VFGLPLDSVTGEQRRSAKAINFGLIYGMSAFGLSRQLNIPRKEAQKYMDLYFERYPGV
+ LEYMERTRAQAKEQGYVETLEGRRLYLPDIKSSNAARRAGAERAAINAPMQGTAADII
+ KRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKGDLDAVSKRIHQLMENCTRIDVPL
+ LVEVGSGENWDQAH"
+ misc_feature complement(3588981..3591749)
+ /locus_tag="SARI_03661"
+ /note="DNA polymerase I; Provisional; Region: PRK05755"
+ /db_xref="CDD:235591"
+ misc_feature complement(<3591330..3591740)
+ /locus_tag="SARI_03661"
+ /note="PIN domain of the 5'-3' exonuclease of
+ Taq DNA polymerase I and homologs; Region: PIN_53EXO;
+ cd09859"
+ /db_xref="CDD:189029"
+ misc_feature complement(order(3591345..3591347,3591351..3591353,
+ 3591417..3591422,3591426..3591428,3591576..3591578,
+ 3591726..3591728))
+ /locus_tag="SARI_03661"
+ /note="active site"
+ /db_xref="CDD:189029"
+ misc_feature complement(order(3591351..3591353,3591420..3591422,
+ 3591726..3591728))
+ /locus_tag="SARI_03661"
+ /note="metal binding site 1 [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:189029"
+ misc_feature complement(3591522..3591560)
+ /locus_tag="SARI_03661"
+ /note="putative 5' ssDNA interaction site; other site"
+ /db_xref="CDD:189029"
+ misc_feature complement(order(3591417..3591419,3591426..3591428))
+ /locus_tag="SARI_03661"
+ /note="metal binding site 3; metal-binding site"
+ /db_xref="CDD:189029"
+ misc_feature complement(order(3591345..3591347,3591351..3591353))
+ /locus_tag="SARI_03661"
+ /note="metal binding site 2 [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:189029"
+ misc_feature complement(3591009..3591248)
+ /locus_tag="SARI_03661"
+ /note="H3TH domain of the 5'-3' exonuclease of
+ Taq DNA polymerase I and homologs; Region: H3TH_53EXO;
+ cd09898"
+ /db_xref="CDD:188618"
+ misc_feature complement(order(3591147..3591158,3591162..3591191,
+ 3591195..3591218))
+ /locus_tag="SARI_03661"
+ /note="putative DNA binding site [nucleotide binding];
+ other site"
+ /db_xref="CDD:188618"
+ misc_feature complement(order(3591201..3591203,3591210..3591212))
+ /locus_tag="SARI_03661"
+ /note="putative metal binding site [ion binding]; other
+ site"
+ /db_xref="CDD:188618"
+ misc_feature complement(3590148..3590732)
+ /locus_tag="SARI_03661"
+ /note="DEDDy 3'-5' exonuclease domain of
+ Escherichia coli DNA polymerase I and similar bacterial
+ family-A DNA polymerases; Region:
+ DNA_polA_I_Ecoli_like_exo; cd06139"
+ /db_xref="CDD:176651"
+ misc_feature complement(order(3590262..3590264,3590274..3590276,
+ 3590343..3590348,3590391..3590396,3590493..3590501,
+ 3590505..3590510,3590682..3590684,3590691..3590702))
+ /locus_tag="SARI_03661"
+ /note="active site"
+ /db_xref="CDD:176651"
+ misc_feature complement(order(3590262..3590264,3590274..3590276,
+ 3590493..3590495,3590694..3590696,3590700..3590702))
+ /locus_tag="SARI_03661"
+ /note="catalytic site [active]"
+ /db_xref="CDD:176651"
+ misc_feature complement(order(3590262..3590264,3590274..3590276,
+ 3590343..3590348,3590391..3590396,3590496..3590501,
+ 3590505..3590510,3590682..3590684,3590691..3590699))
+ /locus_tag="SARI_03661"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:176651"
+ misc_feature complement(3588990..3590123)
+ /locus_tag="SARI_03661"
+ /note="Polymerase I functions primarily to fill DNA gaps
+ that arise during DNA repair, recombination and
+ replication; Region: DNA_pol_A_pol_I_C; cd08637"
+ /db_xref="CDD:176474"
+ misc_feature complement(order(3589119..3589127,3589218..3589220,
+ 3589239..3589241,3589491..3589493,3589503..3589505,
+ 3589563..3589565,3589647..3589652,3589746..3589757,
+ 3589761..3589763,3589767..3589775,3589848..3589853,
+ 3589860..3589862,3589872..3589874))
+ /locus_tag="SARI_03661"
+ /note="active site"
+ /db_xref="CDD:176474"
+ misc_feature complement(order(3589119..3589127,3589218..3589220,
+ 3589230..3589232,3589239..3589244,3589467..3589469,
+ 3589746..3589757,3589761..3589763,3589767..3589775,
+ 3589848..3589853,3589860..3589862,3589872..3589874))
+ /locus_tag="SARI_03661"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:176474"
+ misc_feature complement(order(3589119..3589121,3589491..3589493,
+ 3589503..3589505,3589563..3589565,3589641..3589643,
+ 3589647..3589652))
+ /locus_tag="SARI_03661"
+ /note="catalytic site [active]"
+ /db_xref="CDD:176474"
+ unsure 3590755..3590824
+ /note="Sequence derived from one plasmid subclone"
+ gene 3592152..3593060
+ /locus_tag="SARI_03662"
+ CDS 3592152..3593060
+ /locus_tag="SARI_03662"
+ /inference="protein motif:HMMPfam:IPR002123"
+ /inference="protein motif:HMMSmart:IPR002123"
+ /inference="similar to AA sequence:REFSEQ:YP_152920.1"
+ /note="'KEGG: eci:UTI89_C4450 5.6e-138 yihG; hypothetical
+ protein YihG K00655;
+ COG: COG0204 1-acyl-sn-glycerol-3-phosphate
+ acyltransferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative acyltransferase"
+ /protein_id="YP_001572613.1"
+ /db_xref="GI:161505501"
+ /db_xref="InterPro:IPR002123"
+ /translation="MTRILAAITLPLTIVLTILVTIVCSVPIIVAGMVKLLLPVPGIW
+ RKVSIFCNYMMYCWCAGLTALLRLNPHLQWDVEGLEGLSKKNWYLLICNHRSWADIVV
+ LCILFRKHIPMNKYFLKQQLAWVPFIGLACWALDMPFMKRYSRSYLLRHPERRGKDVE
+ TTRRSCEKFRQYPTTIVNFVEGSRFTREKRQQTHSPYQHLLPPKAAGIAMAINVLGSQ
+ FDKLLNITLCYPDNDRHPFYDMLSGRLTRIVVRVQLEPITEELHGDYVNDKIFKRRFQ
+ RWLNTLWDQKDIQIEGIKTSCKNAGQ"
+ misc_feature 3592221..3593009
+ /locus_tag="SARI_03662"
+ /note="1-acyl-sn-glycerol-3-phosphate acyltransferase
+ [Lipid metabolism]; Region: PlsC; COG0204"
+ /db_xref="CDD:223282"
+ misc_feature 3592338..3592910
+ /locus_tag="SARI_03662"
+ /note="Lysophospholipid Acyltransferases (LPLATs) of
+ Glycerophospholipid Biosynthesis: LCLAT1-like; Region:
+ LPLAT_LCLAT1-like; cd07990"
+ /db_xref="CDD:153252"
+ misc_feature order(3592431..3592433,3592440..3592442,3592446..3592448,
+ 3592503..3592514,3592695..3592703)
+ /locus_tag="SARI_03662"
+ /note="putative acyl-acceptor binding pocket; other site"
+ /db_xref="CDD:153252"
+ unsure 3592911..3592923
+ /locus_tag="SARI_03662"
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(3593073..3593696)
+ /locus_tag="SARI_03663"
+ CDS complement(3593073..3593696)
+ /locus_tag="SARI_03663"
+ /inference="protein motif:Gene3D:IPR012335"
+ /inference="protein motif:HMMPfam:IPR001853"
+ /inference="protein motif:ScanRegExp:IPR006662"
+ /inference="protein motif:superfamily:IPR012336"
+ /inference="similar to AA sequence:REFSEQ:NP_462877.1"
+ /note="'KEGG: bci:BCI_0257 3.8e-52 dsbA; THIol:disulfide
+ interchange protein DsbA K01829;
+ COG: COG0526 Thiol-disulfide isomerase and THIoredoxins;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="periplasmic protein disulfide isomerase I"
+ /protein_id="YP_001572614.1"
+ /db_xref="GI:161505502"
+ /db_xref="InterPro:IPR001853"
+ /db_xref="InterPro:IPR006662"
+ /db_xref="InterPro:IPR012335"
+ /db_xref="InterPro:IPR012336"
+ /translation="MKKIWLALAGMVLAFSASAAQISDGKQYITLDKPVAGEPQVLEF
+ FSFYCPHCYQFEEVLHVSDNVKKKLPEGTKMTKYHVEFLGPLGKDLTQAWAVAMALGV
+ EDKVTVPLFEAVQKTQTVQSAADIRKVFVDAGVKGEDYDAAWNSFVVKSLVAQQEKAA
+ SDLQLQGVPAMFVNGKYQINPQGMDTSSMDVFVQQYADTVKYLVDKK"
+ misc_feature complement(3593091..3593627)
+ /locus_tag="SARI_03663"
+ /note="DsbA family, DsbA subfamily; DsbA is a monomeric
+ thiol disulfide oxidoreductase protein containing a redox
+ active CXXC motif imbedded in a TRX fold. It is involved
+ in the oxidative protein folding pathway in prokaryotes,
+ and is the strongest thiol...; Region: DsbA_DsbA; cd03019"
+ /db_xref="CDD:239317"
+ misc_feature complement(3593106..3593579)
+ /locus_tag="SARI_03663"
+ /note="DSBA-like thioredoxin domain; Region: DSBA;
+ pfam01323"
+ /db_xref="CDD:216433"
+ misc_feature complement(order(3593190..3593192,3593541..3593546,
+ 3593550..3593552))
+ /locus_tag="SARI_03663"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:239317"
+ misc_feature complement(3593445..3593453)
+ /locus_tag="SARI_03663"
+ /note="hinge region; other site"
+ /db_xref="CDD:239317"
+ misc_feature complement(order(3593256..3593285,3593301..3593327,
+ 3593334..3593393,3593406..3593432))
+ /locus_tag="SARI_03663"
+ /note="alpha helical domain; other site"
+ /db_xref="CDD:239317"
+ gene complement(3593713..3594699)
+ /locus_tag="SARI_03664"
+ CDS complement(3593713..3594699)
+ /locus_tag="SARI_03664"
+ /inference="protein motif:HMMPfam:IPR002575"
+ /inference="protein motif:superfamily:IPR011009"
+ /inference="similar to AA sequence:REFSEQ:YP_218876.1"
+ /note="catalyzes the phosphorylation of protein substrates
+ at serine and threonine residues in vitro; specific
+ substrate in vivo has not been identified yet; plays a
+ role in long-term cell survival and expression of surface
+ appendages"
+ /codon_start=1
+ /transl_table=11
+ /product="serine/threonine protein kinase"
+ /protein_id="YP_001572615.1"
+ /db_xref="GI:161505503"
+ /db_xref="InterPro:IPR002575"
+ /db_xref="InterPro:IPR011009"
+ /translation="MNDNAFTFQTLHPETIMDALFEQGIRVDSGLTPLNSYENRVYQF
+ QDEDRRRFVVKFYRPERWSVDQIREEHQFALELVNDEVPVAAPLAFNGQTLLAHQGYH
+ YAIFPSVGGRQFEADNIDQMEAVGRYLGRLHQTGRKRPFTFRPDIGLAEYLFEPRKVF
+ EDAALIPSGQKAAFLKAADTLLSAVTECWRTDFTTLRLHGDCHAGNILWRDGPLFVDL
+ DDARNGPAIQDLWMLLNGDKAEQRMQLETIIEAYEEVSEFDVSEIGLIEPLRAMRLVY
+ YLAWLVRRWGDPAFPKNFPWLTGEDYWQRQATTFIEQAKILHEPPLQLTPMY"
+ misc_feature complement(3593725..3594699)
+ /locus_tag="SARI_03664"
+ /note="Putative homoserine kinase type II (protein kinase
+ fold) [General function prediction only]; Region: COG2334"
+ /db_xref="CDD:225213"
+ misc_feature complement(3593728..3594699)
+ /locus_tag="SARI_03664"
+ /note="serine/threonine protein kinase; Provisional;
+ Region: PRK11768"
+ /db_xref="CDD:236974"
+ unsure 3594688..3594745
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(3594776..3595045)
+ /locus_tag="SARI_03665"
+ CDS complement(3594776..3595045)
+ /locus_tag="SARI_03665"
+ /inference="protein motif:HMMPfam:IPR009383"
+ /inference="similar to AA sequence:INSD:AAL22834.1"
+ /note="'COG: COG3084 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572616.1"
+ /db_xref="GI:161505504"
+ /db_xref="InterPro:IPR009383"
+ /translation="MKCKRLNEVIELLQPAWQKEPDLNLTQFLQKLAKESGFDGNLED
+ LTDDILIYHLKMRDSAKDAAIPGIQKDYEEDFKTALLRARGVIKE"
+ misc_feature complement(3594788..3595045)
+ /locus_tag="SARI_03665"
+ /note="Protein of unknown function (DUF1040); Region:
+ DUF1040; pfam06288"
+ /db_xref="CDD:148100"
+ gene 3595115..3595699
+ /gene="mobA"
+ /locus_tag="SARI_03666"
+ CDS 3595115..3595699
+ /gene="mobA"
+ /locus_tag="SARI_03666"
+ /inference="protein motif:HMMTigr:IPR013482"
+ /inference="similar to AA sequence:INSD:AAO71127.1"
+ /note="in Escherichia coli MobA links a guanosine
+ 5'-phosphate to molydopterin to form molybdopterin guanine
+ dinucleotide during molybdenum cofactor biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="molybdopterin-guanine dinucleotide biosynthesis
+ protein MobA"
+ /protein_id="YP_001572617.1"
+ /db_xref="GI:161505505"
+ /db_xref="InterPro:IPR013482"
+ /translation="MNQDEVITGVVLAGGKARRMGGADKGLLELDGKPLWRHVADALA
+ PQLATVVISANRHLDIYQASGLKIIPDSIADFPGPLAGILSVFQQVTGDWFLFCPCDN
+ PYIPHNIVDRLSAQRHGAPVVWVHDGERDHPTIALINRSVQPQLTAYLQAGERRVMVF
+ MRQVGGHAVDFSDCKEAFVNVNTPEELAKWQKRP"
+ misc_feature 3595133..3595693
+ /gene="mobA"
+ /locus_tag="SARI_03666"
+ /note="molybdopterin-guanine dinucleotide biosynthesis
+ protein MobA; Reviewed; Region: mobA; PRK00317"
+ /db_xref="CDD:234725"
+ misc_feature 3595133..3595675
+ /gene="mobA"
+ /locus_tag="SARI_03666"
+ /note="MobA catalyzes the formation of molybdopterin
+ guanine dinucleotide; Region: MobA; cd02503"
+ /db_xref="CDD:133000"
+ misc_feature order(3595148..3595156,3595160..3595162,3595187..3595189,
+ 3595271..3595273,3595325..3595327,3595346..3595351,
+ 3595358..3595360,3595409..3595411,3595415..3595417)
+ /gene="mobA"
+ /locus_tag="SARI_03666"
+ /note="GTP binding site; other site"
+ /db_xref="CDD:133000"
+ gene 3595696..3596220
+ /locus_tag="SARI_03667"
+ CDS 3595696..3596220
+ /locus_tag="SARI_03667"
+ /inference="protein motif:HMMPfam:IPR004435"
+ /inference="protein motif:HMMPIR:IPR012249"
+ /inference="protein motif:HMMTigr:IPR004435"
+ /inference="similar to AA sequence:INSD:AAV79603.1"
+ /note="in Escherichia coli the MobB protein is not
+ essential but has been found to interact with multiple
+ proteins involved in the molybdopterin guanine
+ dinucleotide cofactor biosynthesis pathway"
+ /codon_start=1
+ /transl_table=11
+ /product="molybdopterin-guanine dinucleotide biosynthesis
+ protein B"
+ /protein_id="YP_001572618.1"
+ /db_xref="GI:161505506"
+ /db_xref="InterPro:IPR004435"
+ /db_xref="InterPro:IPR012249"
+ /translation="MIPLLAIAAWSGTGKTTLLKKLIPALCASGIRPGLIKHTHHNMD
+ VDKPGKDSYELRKAGAAQTLVASQQRWALMTETPEQEELDLAWLVSRMDASKLDLVLV
+ EGFKHEPVAKIVLFRNDAGHDVNELAIDEHTIAVASDIALNIGVPVLDLNDVDGIVAF
+ IVAKLGLTAAPEWA"
+ misc_feature 3595699..3596181
+ /locus_tag="SARI_03667"
+ /note="Molybdenum is an essential trace element in the
+ form of molybdenum cofactor (Moco) which is associated
+ with the metabolism of nitrogen, carbon and sulfur by
+ redox active enzymes. In E. coli, the synthesis of Moco
+ involves genes from several loci: moa; Region: MobB;
+ cd03116"
+ /db_xref="CDD:239390"
+ misc_feature order(3595720..3595722,3595735..3595743)
+ /locus_tag="SARI_03667"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:239390"
+ gene complement(3596341..3596456)
+ /locus_tag="SARI_03668"
+ rRNA complement(3596341..3596456)
+ /locus_tag="SARI_03668"
+ /product="5S ribosomal RNA"
+ /inference="nucleotide motif:Rfam:RF00001"
+ /note="Rfam score 80.16"
+ gene complement(3596650..3599556)
+ /locus_tag="SARI_03669"
+ rRNA complement(3596650..3599556)
+ /locus_tag="SARI_03669"
+ /product="23S ribosomal RNA"
+ /note="Gene model created based on homology with SPA4016"
+ gene complement(3599743..3599815)
+ /locus_tag="SARI_03670"
+ tRNA complement(3599743..3599815)
+ /locus_tag="SARI_03670"
+ /product="tRNA-Glu"
+ gene complement(3599983..3601529)
+ /locus_tag="SARI_03671"
+ rRNA complement(3599983..3601529)
+ /locus_tag="SARI_03671"
+ /product="16S ribosomal RNA"
+ /inference="nucleotide motif:Rfam:RF00177"
+ /note="Rfam score 355.13;
+ 5 domain"
+ gene complement(3601904..3602449)
+ /gene="hemG"
+ /locus_tag="SARI_03672"
+ CDS complement(3601904..3602449)
+ /gene="hemG"
+ /locus_tag="SARI_03672"
+ /inference="protein motif:HMMPfam:IPR008254"
+ /inference="protein motif:ScanRegExp:IPR001226"
+ /inference="similar to AA sequence:INSD:AAX67789.1"
+ /note="catalyzes the oxidation of protoporphyrinogen IX to
+ form protoporphyrin IX"
+ /codon_start=1
+ /transl_table=11
+ /product="protoporphyrinogen oxidase"
+ /protein_id="YP_001572619.1"
+ /db_xref="GI:161505507"
+ /db_xref="InterPro:IPR001226"
+ /db_xref="InterPro:IPR008254"
+ /translation="MKTLILFSTRDGQTREIASYLASELKEMGIWADVVNLHRAEEPD
+ WDSYDRVVIGASIRYGHYHSAFQEFVKKYATRLNGMPSAFYSVNLVARKAEKRTPQTN
+ SYARKFLMSSPWRPDHCAVIAGALRYPRYRWYDRLMIKLIMKMSGGETDTSKEVVYTD
+ WEQVANFAREIAHLTNKSSAK"
+ misc_feature complement(3601916..3602449)
+ /gene="hemG"
+ /locus_tag="SARI_03672"
+ /note="protoporphyrinogen oxidase; Provisional; Region:
+ hemG; PRK11104"
+ /db_xref="CDD:182966"
+ gene complement(3602461..3603912)
+ /locus_tag="SARI_03673"
+ CDS complement(3602461..3603912)
+ /locus_tag="SARI_03673"
+ /inference="protein motif:HMMPfam:IPR003445"
+ /inference="protein motif:HMMTigr:IPR004772"
+ /inference="similar to AA sequence:INSD:AAV79601.1"
+ /note="'KEGG: shn:Shewana3_0031 1.3e-76 potassium uptake
+ protein, TrkH family K00961;
+ COG: COG0168 Trk-type K+ transport systems, membrane
+ components;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="potassium transporter"
+ /protein_id="YP_001572620.1"
+ /db_xref="GI:161505508"
+ /db_xref="InterPro:IPR003445"
+ /db_xref="InterPro:IPR004772"
+ /translation="MHFRAITRIVGLLVILFSGTMILPGLVALIYRDGAGRAFTQTFF
+ VALAIGSILWWPNRREKGELKSREGFLIVVLFWTVLGSVGALPFIFSESPNLTITDAF
+ FESFSGLTTTGATTLVGLDSLPHAILFYRQMLQWFGGMGIIVLAVAILPILGVGGMQL
+ YRAEMPGPLKDNKMRPRIAETAKTLWLIYVLLTVACALALWFAGMSAFDAIGHSFATI
+ AIGGFSMHDASIGYFDSPTINTIIAIFLLISGCNYGLHFSLLSGRSLKVYWRDPEFRM
+ FIGVQLTLVVICTMVLWFHNIYDSALTTLNQAFFQVVSMATTAGFTTDSIARWPLFLP
+ VLLLCSAFIGGCAGSTGGGLKVIRILLLFKQGNRELKRLVHPNAVYSIKLGNRALPER
+ ILEAVWGFFSAYALVFIVSMLAIIATGVDDFSAFASVAATLNNLGPGLGVVADNFASM
+ NPVAKWILIANMLFGRLEVFTLLVLFTPTFWRE"
+ misc_feature complement(3602464..3603912)
+ /locus_tag="SARI_03673"
+ /note="potassium transporter; Provisional; Region:
+ PRK10750"
+ /db_xref="CDD:182698"
+ misc_feature complement(3602515..3603666)
+ /locus_tag="SARI_03673"
+ /note="potassium uptake protein, TrkH family; Region:
+ 2a38; TIGR00933"
+ /db_xref="CDD:233196"
+ gene complement(3603951..3604565)
+ /locus_tag="SARI_03674"
+ CDS complement(3603951..3604565)
+ /locus_tag="SARI_03674"
+ /inference="protein motif:HMMPfam:IPR001498"
+ /inference="protein motif:HMMTigr:IPR001498"
+ /inference="protein motif:ScanRegExp:IPR001498"
+ /inference="protein motif:superfamily:IPR009022"
+ /inference="similar to AA sequence:REFSEQ:YP_218869.1"
+ /note="'KEGG: eci:UTI89_C4433 4.2e-94 yigZ; hypothetical
+ protein K00560;
+ COG: COG1739 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572621.1"
+ /db_xref="GI:161505509"
+ /db_xref="InterPro:IPR001498"
+ /db_xref="InterPro:IPR009022"
+ /translation="MDSWLIPAAPVTVVEEIKKSRFITLLAHTDGVDAAKAFVESVRA
+ EHPDARHHCVAWVAGAPDDSQQLGFSDDGEPAGTAGKPMLAQLMGSGVGEITAVVVRY
+ YGGILLGTGGLVKAYGGGVNQALRQLATQRKTPLTEYTLQCEYGQLAGIEALLGQFAA
+ KIVSSDYQASVRLRVALPFAHVNAFSTKLADFSRGSLQLLAIEE"
+ misc_feature complement(3603954..3604565)
+ /locus_tag="SARI_03674"
+ /note="hypothetical protein; Provisional; Region:
+ PRK11568"
+ /db_xref="CDD:183205"
+ misc_feature complement(3604188..3604517)
+ /locus_tag="SARI_03674"
+ /note="Uncharacterized protein family UPF0029; Region:
+ UPF0029; pfam01205"
+ /db_xref="CDD:216363"
+ misc_feature complement(3603981..3604145)
+ /locus_tag="SARI_03674"
+ /note="Domain of unknown function (DUF1949); Region:
+ DUF1949; pfam09186"
+ /db_xref="CDD:204160"
+ gene complement(3604565..3605896)
+ /locus_tag="SARI_03675"
+ CDS complement(3604565..3605896)
+ /locus_tag="SARI_03675"
+ /inference="protein motif:Gene3D:IPR000994"
+ /inference="protein motif:HMMPanther:IPR000994"
+ /inference="protein motif:HMMPfam:IPR000994"
+ /inference="protein motif:ScanRegExp:IPR001131"
+ /inference="similar to AA sequence:REFSEQ:YP_152911.1"
+ /note="catalyzes the hydrolysis of dipeptides with a
+ proline at the C-terminal; also catalyzes the low
+ efficiency hydrolysis of organophosphate di- and
+ tri-esters"
+ /codon_start=1
+ /transl_table=11
+ /product="proline dipeptidase"
+ /protein_id="YP_001572622.1"
+ /db_xref="GI:161505510"
+ /db_xref="InterPro:IPR000994"
+ /db_xref="InterPro:IPR001131"
+ /translation="MESLAALYKNHIVTLQERTRDVLARFKLDALLIHSGELFNVFLD
+ DHPYPFKVNPQFKAWVPVTQVPNCWLLVDGVNKPKLWFYLPVDYWHNVEPLPTSFWTE
+ EIEVVALPKADGIGSQLPVARGNIGYIGSAPERALQLDIAANNINPKGVIDYLHYYRA
+ YKTDYELACMREAQKMAVSGHHAAEEAFRSGMSEFDINLAYLTATGHRDTDVPYSNIV
+ ALNEHAAVLHYTKLDHQAPSEMRSFLLDAGAEYNGYAADLTRTWSAKNDNDYAQLVKD
+ VNDEQLALIATMKAGISYVDYHIQFHQRIAKLLRKHQIITDMSEEAMVENDLTGPFMP
+ HGIGHPLGLQVHDVAGFMQDDSGTHLAAPSKYPYLRCTRVLQPRMVLTIEPGIYFIES
+ LLAPWREGPFSKHFNWQKIEALKPFGGIRIEDNVVIHENGVENMTRDLKLA"
+ misc_feature complement(3604568..3605896)
+ /locus_tag="SARI_03675"
+ /note="proline dipeptidase; Provisional; Region: PRK13607"
+ /db_xref="CDD:237444"
+ misc_feature complement(3604583..3605398)
+ /locus_tag="SARI_03675"
+ /note="Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro
+ dipeptidase, X-Pro dipeptidase, proline dipeptidase.,
+ imidodipeptidase, peptidase D, gamma-peptidase. Catalyses
+ hydrolysis of Xaa-Pro dipeptides; also acts on
+ aminoacyl-hydroxyproline analogs. No action on...; Region:
+ Prolidase; cd01087"
+ /db_xref="CDD:238520"
+ misc_feature complement(order(3604628..3604630,3604745..3604747,
+ 3604880..3604882,3605126..3605128,3605159..3605161,
+ 3605213..3605215))
+ /locus_tag="SARI_03675"
+ /note="active site"
+ /db_xref="CDD:238520"
+ gene 3606087..3608276
+ /gene="fadB"
+ /locus_tag="SARI_03676"
+ CDS 3606087..3608276
+ /gene="fadB"
+ /locus_tag="SARI_03676"
+ /inference="protein motif:Gene3D:IPR006108"
+ /inference="protein motif:HMMPfam:IPR001753"
+ /inference="protein motif:HMMPfam:IPR006108"
+ /inference="protein motif:HMMPfam:IPR006176"
+ /inference="protein motif:HMMTigr:IPR012799"
+ /inference="protein motif:ScanRegExp:IPR001753"
+ /inference="protein motif:ScanRegExp:IPR006180"
+ /inference="protein motif:superfamily:IPR008927"
+ /note="'includes enoyl-CoA hydratase,
+ delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
+ 3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA
+ epimerase; catalyzes the formation of an hydroxyacyl-CoA
+ by addition of water on enoyl-CoA; also exhibits
+ 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA
+ dehydrogenase activities; forms a heterotetramer with
+ FadA; similar to FadI2J2 complex; functions in
+ beta-oxidation of fatty acids'"
+ /codon_start=1
+ /transl_table=11
+ /product="multifunctional fatty acid oxidation complex
+ subunit alpha"
+ /protein_id="YP_001572623.2"
+ /db_xref="GI:448236282"
+ /db_xref="InterPro:IPR001753"
+ /db_xref="InterPro:IPR006108"
+ /db_xref="InterPro:IPR006176"
+ /db_xref="InterPro:IPR006180"
+ /db_xref="InterPro:IPR008927"
+ /db_xref="InterPro:IPR012799"
+ /translation="MLYKGDTLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGQALD
+ VLEKQHDLKGLLLRSNKAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLP
+ VPTLAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRLPRMLGA
+ DSALEIIAAGKDVGAEQALKIGLVDGVVKQEKLIEGAMAVLRQAIVGDLDWKAKRQPK
+ LEPLKLSKIEAAMSFTIAKGMVAQTAGKHYPAPMTAVKTIEAAARFGRDEALNLENKS
+ FVPLAHTNEARALVGIFLNDQYVKGKAKKLTKDIETPKQAAVLGAGIMGGGIAYQSAW
+ KGVPVIMKDINDKSLNLGMTEAAKLLNKQLERGKIDGLKLAGVISTIHPTLDYAGFDR
+ VDVVVEAVVENPKVKKAVLAETEQKVRPQTVLASNTSTIPIGELASALERPENFCGMH
+ FFNPVHRMPLVEIIRGEKSSDETIAKVVAWASKMGKTPIVVNDCPGFFVNRVLFPYFA
+ GFSQLLRDGADFRKVDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPQRMQK
+ EYRDAIDALFDASRFGQKNGLGFWRYKEDSKGKPKKEEDAAVDDLLASVNQPKRDFSD
+ DEIIARMMIPMINEVVRCLEEGIIASPAEADMALVYGLGFPPFHGGAFRWLDTQGSAK
+ YLDIAQQYQHLGPLYEVPEGLRNKARHNEPYYPPVEPARPVGSLKTA"
+ misc_feature 3606087..3608231
+ /gene="fadB"
+ /locus_tag="SARI_03676"
+ /note="multifunctional fatty acid oxidation complex
+ subunit alpha; Reviewed; Region: fadB; PRK11730"
+ /db_xref="CDD:183293"
+ misc_feature 3606126..3606695
+ /gene="fadB"
+ /locus_tag="SARI_03676"
+ /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
+ superfamily. This superfamily contains a diverse set of
+ enzymes including enoyl-CoA hydratase, napthoate synthase,
+ methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
+ dehydratase, and dienoyl-CoA isomerase; Region:
+ crotonase-like; cd06558"
+ /db_xref="CDD:119339"
+ misc_feature order(3606168..3606170,3606174..3606176,3606270..3606272,
+ 3606282..3606296,3606420..3606422,3606426..3606434,
+ 3606498..3606503,3606510..3606512)
+ /gene="fadB"
+ /locus_tag="SARI_03676"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:119339"
+ misc_feature order(3606288..3606290,3606432..3606434)
+ /gene="fadB"
+ /locus_tag="SARI_03676"
+ /note="oxyanion hole (OAH) forming residues; other site"
+ /db_xref="CDD:119339"
+ misc_feature order(3606372..3606374,3606396..3606398,3606459..3606470,
+ 3606504..3606515,3606531..3606533,3606537..3606545,
+ 3606549..3606554,3606567..3606572,3606576..3606581,
+ 3606585..3606590,3606597..3606599,3606630..3606632,
+ 3606639..3606641,3606684..3606686,3606693..3606695)
+ /gene="fadB"
+ /locus_tag="SARI_03676"
+ /note="trimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119339"
+ misc_feature 3607029..3607568
+ /gene="fadB"
+ /locus_tag="SARI_03676"
+ /note="3-hydroxyacyl-CoA dehydrogenase, NAD binding
+ domain; Region: 3HCDH_N; pfam02737"
+ /db_xref="CDD:202367"
+ misc_feature 3607572..3607862
+ /gene="fadB"
+ /locus_tag="SARI_03676"
+ /note="3-hydroxyacyl-CoA dehydrogenase, C-terminal domain;
+ Region: 3HCDH; pfam00725"
+ /db_xref="CDD:216084"
+ misc_feature 3607965..>3608150
+ /gene="fadB"
+ /locus_tag="SARI_03676"
+ /note="3-hydroxyacyl-CoA dehydrogenase, C-terminal domain;
+ Region: 3HCDH; pfam00725"
+ /db_xref="CDD:216084"
+ gene 3608286..3609449
+ /gene="fadA"
+ /locus_tag="SARI_03677"
+ CDS 3608286..3609449
+ /gene="fadA"
+ /locus_tag="SARI_03677"
+ /inference="protein motif:HMMPanther:IPR002155"
+ /inference="protein motif:HMMPfam:IPR002155"
+ /inference="protein motif:HMMTigr:IPR002155"
+ /inference="protein motif:HMMTigr:IPR012805"
+ /inference="protein motif:ScanRegExp:IPR001412"
+ /inference="protein motif:ScanRegExp:IPR002155"
+ /inference="similar to AA sequence:INSD:CAD07911.1"
+ /note="FadA; fatty acid oxidation complex component beta;
+ functions in a heterotetramer with FadB; similar to
+ FadI2J2 complex; functions in beta-oxidation of fatty
+ acids"
+ /codon_start=1
+ /transl_table=11
+ /product="3-ketoacyl-CoA thiolase"
+ /protein_id="YP_001572624.1"
+ /db_xref="GI:161505512"
+ /db_xref="InterPro:IPR001412"
+ /db_xref="InterPro:IPR002155"
+ /db_xref="InterPro:IPR012805"
+ /translation="MEQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPS
+ LTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPAVTVNRLCGSSMQALHDAA
+ RMIMTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLSRLHGI
+ SREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIRPETTVEA
+ LSTLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCD
+ PSIMGYGPVPASKLALKKAGLSASDIDVFEMNEAFAAQILPCIKDLGLMEQIDEKINL
+ NGGAIALGHPLGCSGARISTTLINLMERKDAQFGLATMCIGLGQGIATVFERV"
+ misc_feature 3608286..3609446
+ /gene="fadA"
+ /locus_tag="SARI_03677"
+ /note="3-ketoacyl-CoA thiolase; Reviewed; Region: fadA;
+ PRK08947"
+ /db_xref="CDD:181592"
+ misc_feature 3608298..3609443
+ /gene="fadA"
+ /locus_tag="SARI_03677"
+ /note="Thiolase are ubiquitous enzymes that catalyze the
+ reversible thiolytic cleavage of 3-ketoacyl-CoA into
+ acyl-CoA and acetyl-CoA, a 2-step reaction involving a
+ covalent intermediate formed with a catalytic cysteine.
+ They are found in prokaryotes and...; Region: thiolase;
+ cd00751"
+ /db_xref="CDD:238383"
+ misc_feature order(3608355..3608357,3608439..3608441,3608484..3608486,
+ 3608493..3608495,3608505..3608507,3608538..3608549,
+ 3608571..3608573,3608592..3608597,3608604..3608606,
+ 3608649..3608651,3609093..3609095,3609099..3609101,
+ 3609105..3609107,3609165..3609167,3609411..3609416)
+ /gene="fadA"
+ /locus_tag="SARI_03677"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238383"
+ misc_feature order(3608556..3608558,3609312..3609314,3609402..3609404)
+ /gene="fadA"
+ /locus_tag="SARI_03677"
+ /note="active site"
+ /db_xref="CDD:238383"
+ gene complement(3609635..3610336)
+ /gene="fre"
+ /locus_tag="SARI_03678"
+ CDS complement(3609635..3610336)
+ /gene="fre"
+ /locus_tag="SARI_03678"
+ /inference="protein motif:FPrintScan:IPR001221"
+ /inference="protein motif:HMMPfam:IPR001433"
+ /inference="protein motif:HMMPfam:IPR008333"
+ /inference="similar to AA sequence:REFSEQ:YP_218864.1"
+ /note="NAD(P)H-flavin reductase; catalyzes the reversible
+ oxidation/reduction of NAD(P) and flavine mononucleotide;
+ in Salmonella and E. coli this protein also reduces
+ aquacob(III)alamin to cob(II)alamin"
+ /codon_start=1
+ /transl_table=11
+ /product="FMN reductase"
+ /protein_id="YP_001572625.1"
+ /db_xref="GI:161505513"
+ /db_xref="InterPro:IPR001221"
+ /db_xref="InterPro:IPR001433"
+ /db_xref="InterPro:IPR008333"
+ /translation="MTTLSCKVTSVEAITDTVYRVRLVPDAAFSFRAGQYLMVVMDER
+ DKRPFSMASTPDEKGFIELHIGASELNLYAMAVMDRILKDREVVVDIPHGDAWLRDDE
+ ERPLILIAGGTGFSYVRSILLTALARNPDRDVTIYWGGREEKHLYDLSELEALSVNHP
+ NLRIEPVVEQPEEGWRGRTGTVLTAVLQDHGTLAGHDIYIAGRFEMAKIARDLFCNER
+ NAQEERLFGDAFAFI"
+ misc_feature complement(3609638..3610333)
+ /gene="fre"
+ /locus_tag="SARI_03678"
+ /note="FMN reductase; Validated; Region: fre; PRK08051"
+ /db_xref="CDD:236142"
+ misc_feature complement(3609647..3610321)
+ /gene="fre"
+ /locus_tag="SARI_03678"
+ /note="NAD(P)H dependent flavin oxidoreductases use flavin
+ as a substrate in mediating electron transfer from iron
+ complexes or iron proteins. Structurally similar to
+ ferredoxin reductases, but with only 15% sequence
+ identity, flavin reductases reduce FAD, FMN; Region:
+ flavin_oxioreductase; cd06189"
+ /db_xref="CDD:99786"
+ misc_feature complement(order(3609647..3609649,3609653..3609655,
+ 3609989..3609991,3609998..3610000,3610115..3610123,
+ 3610133..3610135,3610139..3610147,3610187..3610198,
+ 3610229..3610231))
+ /gene="fre"
+ /locus_tag="SARI_03678"
+ /note="FAD binding pocket [chemical binding]; other site"
+ /db_xref="CDD:99786"
+ misc_feature complement(order(3610187..3610192,3610196..3610198))
+ /gene="fre"
+ /locus_tag="SARI_03678"
+ /note="FAD binding motif [chemical binding]; other site"
+ /db_xref="CDD:99786"
+ misc_feature complement(order(3610055..3610057,3610061..3610063,
+ 3610085..3610087,3610106..3610108,3610115..3610117,
+ 3610124..3610126))
+ /gene="fre"
+ /locus_tag="SARI_03678"
+ /note="phosphate binding motif [ion binding]; other site"
+ /db_xref="CDD:99786"
+ misc_feature complement(order(3609986..3609988,3609992..3610003,
+ 3610013..3610015))
+ /gene="fre"
+ /locus_tag="SARI_03678"
+ /note="beta-alpha-beta structure motif; other site"
+ /db_xref="CDD:99786"
+ misc_feature complement(order(3609728..3609733,3609914..3609922,
+ 3609995..3610000))
+ /gene="fre"
+ /locus_tag="SARI_03678"
+ /note="NAD binding pocket [chemical binding]; other site"
+ /db_xref="CDD:99786"
+ gene complement(3610422..3611900)
+ /locus_tag="SARI_03679"
+ CDS complement(3610422..3611900)
+ /locus_tag="SARI_03679"
+ /inference="protein motif:HMMPfam:IPR002830"
+ /inference="protein motif:HMMTigr:IPR002830"
+ /inference="protein motif:superfamily:IPR009010"
+ /inference="similar to AA sequence:REFSEQ:YP_218863.1"
+ /note="catalyzes the decarboxylation of
+ 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol"
+ /codon_start=1
+ /transl_table=11
+ /product="3-octaprenyl-4-hydroxybenzoate decarboxylase"
+ /protein_id="YP_001572626.1"
+ /db_xref="GI:161505514"
+ /db_xref="InterPro:IPR002830"
+ /db_xref="InterPro:IPR009010"
+ /translation="MDAMKYHDLRDFLTLLEQQGELKRITLPVDPHLEITEIADRTLR
+ AGGPALLFENPKGYSMPVLCNLFGTPKRVAMGMGQDDVSALRDVGKLLAFLKEPEPPK
+ GFRDLFDKLPQFKQVLNMPTKRLRGAPCQQKIASGDDVDLTRLPIMTCWPDDAAPLIT
+ WGLTVTRGPHKERQNLGIYRQQLIDKNKLIMRWLSHRGGALDFQEWLAAHPGERFPIS
+ VALGADPATILGAVTPVPDTLSEYAFAGLLRGTKTEVVKCLSNDLEVPASAEIILEGY
+ IEPGEMAPEGPYGDHTGYYNEVDNFPVFTVTHITQREDAIYHSTYTGRPPDEPAVLGV
+ ALNEVFVPILQKQFPEIVDFYLPPEGCSYRLAVVTMKKQYAGHAKRVMMGVWSFLRQF
+ MYTKFVIVCDDDVNARDWNDVIWAITTRMDPARDTVLVDNTPIDYLDFASPVSGLGSK
+ MGLDATNKWPGETQREWGRPIVKDPEVTARIDAIWDELAIFK"
+ misc_feature complement(3610425..3611900)
+ /locus_tag="SARI_03679"
+ /note="3-octaprenyl-4-hydroxybenzoate decarboxylase;
+ Provisional; Region: PRK10922"
+ /db_xref="CDD:236796"
+ gene 3612086..3612574
+ /gene="rfaH"
+ /locus_tag="SARI_03680"
+ CDS 3612086..3612574
+ /gene="rfaH"
+ /locus_tag="SARI_03680"
+ /inference="protein motif:HMMPfam:IPR001062"
+ /inference="protein motif:HMMSmart:IPR006645"
+ /inference="protein motif:HMMTigr:IPR010215"
+ /inference="similar to AA sequence:INSD:AAV79594.1"
+ /note="'COG: COG0250 Transcription antiterminator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="transcriptional activator RfaH"
+ /protein_id="YP_001572627.2"
+ /db_xref="GI:448236283"
+ /db_xref="InterPro:IPR001062"
+ /db_xref="InterPro:IPR006645"
+ /db_xref="InterPro:IPR010215"
+ /translation="MQSWYLLYCKRGQLQRAQEHLERQAVSCLTPMITLEKMVRGKRT
+ SVSEPLFPNYLFVEFDPEVIHTTTINATRGVSHFVRFGAHPAIVPSSVIHQLSIYKPE
+ GVVDPETPYPGDSVIITEGAFEGLKAIFTEPDGETRSMLLLNLLNKEVKQSVKNTGFR
+ KI"
+ misc_feature 3612086..3612571
+ /gene="rfaH"
+ /locus_tag="SARI_03680"
+ /note="transcriptional activator RfaH; Provisional;
+ Region: rfaH; PRK09014"
+ /db_xref="CDD:181611"
+ misc_feature 3612092..3612373
+ /gene="rfaH"
+ /locus_tag="SARI_03680"
+ /note="N-Utilization Substance G (NusG) N-terminal domain
+ in the NusG Specialized Paralog (SP), RfaH; Region:
+ NGN_SP_RfaH; cd09892"
+ /db_xref="CDD:193581"
+ misc_feature 3612419..>3612499
+ /gene="rfaH"
+ /locus_tag="SARI_03680"
+ /note="KOW: an acronym for the authors' surnames
+ (Kyrpides, Ouzounis and Woese); Region: KOW; cl00354"
+ /db_xref="CDD:241810"
+ gene complement(3612582..3613376)
+ /locus_tag="SARI_03681"
+ CDS complement(3612582..3613376)
+ /locus_tag="SARI_03681"
+ /inference="protein motif:HMMPanther:IPR001130"
+ /inference="protein motif:HMMPfam:IPR001130"
+ /inference="protein motif:HMMPIR:IPR012278"
+ /inference="protein motif:ScanRegExp:IPR001130"
+ /inference="similar to AA sequence:REFSEQ:NP_462861.2"
+ /note="magnesium dependent; not involved in the
+ Sec-independent protein export system"
+ /codon_start=1
+ /transl_table=11
+ /product="DNase TatD"
+ /protein_id="YP_001572628.1"
+ /db_xref="GI:161505516"
+ /db_xref="InterPro:IPR001130"
+ /db_xref="InterPro:IPR012278"
+ /translation="MGASMFDIGVNLTSSQFAKDRDDVVVRAFAAGVKGMLLTGTNIH
+ ESQQTLKLARRYPHCWSTAGVHPHDSSQWSSASEDAIITLANQPEVVAIGECGLDFNR
+ NFSTPQEQERAFQAQLQIAAELQMPIFMHCRDAHERFLALLDPWLDSLPGAILHCFTG
+ SRQQMQACVDRGIYIGITGWICDERRGLELRELLPFIPAEKLLIETDAPYLLPRDLTP
+ KPTSRRNEPAYLPHILERIALWRDEDPQWLAAMTDANARTLFEVVF"
+ misc_feature complement(3612597..3613364)
+ /locus_tag="SARI_03681"
+ /note="TatD like proteins; E.coli TatD is a cytoplasmic
+ protein, shown to have magnesium dependent DNase activity;
+ Region: TatD_DNAse; cd01310"
+ /db_xref="CDD:238635"
+ misc_feature complement(order(3612756..3612758,3612909..3612911,
+ 3612984..3612986,3613344..3613346,3613350..3613352))
+ /locus_tag="SARI_03681"
+ /note="active site"
+ /db_xref="CDD:238635"
+ gene complement(3613406..3614185)
+ /locus_tag="SARI_03682"
+ CDS complement(3613406..3614185)
+ /locus_tag="SARI_03682"
+ /inference="protein motif:HMMPfam:IPR002033"
+ /inference="protein motif:HMMTigr:IPR002033"
+ /inference="protein motif:ScanRegExp:IPR002033"
+ /inference="similar to AA sequence:INSD:AAF33418.1"
+ /note="with TatABE forms the twin-arginine translocation
+ complex which is involved in the transport of proteins
+ across the cytoplasmic membrane"
+ /codon_start=1
+ /transl_table=11
+ /product="twin-arginine protein translocation system
+ subunit TatC"
+ /protein_id="YP_001572629.1"
+ /db_xref="GI:161505517"
+ /db_xref="InterPro:IPR002033"
+ /translation="MAVEDTQPLITHLIELRKRLLNCIVAVLLIFLALVYFANDIYHL
+ VAAPLIKQMPQGATMIATDVASPFFTPIKLTFMVSLILSAPVILYQVWAFIAPALYKH
+ ERRLVVPLLVSSSLLFYIGMAFAYFVVFPLAFGFLTHTAPEGVQVSTDIASYLSFVMA
+ LFMAFGVAFEVPVAIVLLCWMGITTPEDLRKKRPYILVGAFIVGMLLTPPDVFSQTLL
+ AIPMYCLFEIGVFCSRFYVGKRRTRDEDNEAETEKAEHTED"
+ misc_feature complement(3613412..3614185)
+ /locus_tag="SARI_03682"
+ /note="twin-arginine protein translocation system subunit
+ TatC; Provisional; Region: PRK10921"
+ /db_xref="CDD:182840"
+ gene complement(3614188..3614736)
+ /locus_tag="SARI_03683"
+ CDS complement(3614188..3614736)
+ /locus_tag="SARI_03683"
+ /inference="protein motif:FPrintScan:IPR003998"
+ /inference="protein motif:HMMPfam:IPR003369"
+ /inference="protein motif:HMMTigr:IPR003998"
+ /inference="similar to AA sequence:SwissProt:P57048"
+ /note="mediates the export of protein precursors bearing
+ twin-arginine signal peptides"
+ /codon_start=1
+ /transl_table=11
+ /product="sec-independent translocase"
+ /protein_id="YP_001572630.1"
+ /db_xref="GI:161505518"
+ /db_xref="InterPro:IPR003369"
+ /db_xref="InterPro:IPR003998"
+ /translation="MFDIGFSELLLVFVIGLIVLGPQRLPVAVKTVAGWIRALRSLAT
+ TVQNELTQELKLQEFQDSLKKVEKASLENLTPELKASMDELRQAAESMKRTYSANDPE
+ QASDEAHTIHNPVVKGNETQHEGVTPAAAETQASAPEQKPESVKANAPESTETASVAT
+ IDAEKKSAAPVVESSPSSSDKP"
+ misc_feature complement(3614245..3614736)
+ /locus_tag="SARI_03683"
+ /note="sec-independent translocase; Provisional; Region:
+ PRK01770"
+ /db_xref="CDD:179334"
+ misc_feature complement(3614296..3614736)
+ /locus_tag="SARI_03683"
+ /note="sec-independent translocase; Provisional; Region:
+ tatB; PRK00404"
+ /db_xref="CDD:166942"
+ gene complement(3614740..3614994)
+ /gene="tatA"
+ /locus_tag="SARI_03684"
+ CDS complement(3614740..3614994)
+ /gene="tatA"
+ /locus_tag="SARI_03684"
+ /inference="protein motif:HMMPfam:IPR003369"
+ /inference="protein motif:HMMTigr:IPR006312"
+ /inference="similar to AA sequence:INSD:CAD07919.1"
+ /note="TatA; similar to TatE that is found in some
+ proteobacteria; part of system that translocates proteins
+ with a conserved twin arginine motif across the inner
+ membrane; capable of translocating folded substrates
+ typically those with bound cofactors; similar to a protein
+ import system in thylakoid membranes"
+ /codon_start=1
+ /transl_table=11
+ /product="twin arginine translocase protein A"
+ /protein_id="YP_001572631.1"
+ /db_xref="GI:161505519"
+ /db_xref="InterPro:IPR003369"
+ /db_xref="InterPro:IPR006312"
+ /translation="MGGISIWQLLIVAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMS
+ DDDAKQDKTSQDADFTAKSIADKQGEAKKEDAKSQDKEQV"
+ misc_feature complement(3614743..3614994)
+ /gene="tatA"
+ /locus_tag="SARI_03684"
+ /note="twin arginine translocase protein A; Provisional;
+ Region: tatA; PRK03554"
+ /db_xref="CDD:179592"
+ gene complement(3615200..3616840)
+ /gene="ubiB"
+ /locus_tag="SARI_03685"
+ CDS complement(3615200..3616840)
+ /gene="ubiB"
+ /locus_tag="SARI_03685"
+ /inference="protein motif:HMMPfam:IPR004147"
+ /inference="protein motif:HMMTigr:IPR010232"
+ /inference="protein motif:superfamily:IPR011009"
+ /inference="similar to AA sequence:INSD:AAX67776.1"
+ /note="an Escherichia coli mutant results in accumulation
+ of octaprenylphenol and no ubiquinone; functions in the
+ formation of 2-octaprenyl-6-hydroxy-phenol from
+ 2-octaprenylphenol in ubiquinone (coenzyme Q)
+ biosynthesis; similar to eukaryotic proteins that exhibit
+ kinase functions"
+ /codon_start=1
+ /transl_table=11
+ /product="putative ubiquinone biosynthesis protein UbiB"
+ /protein_id="YP_001572632.2"
+ /db_xref="GI:448236284"
+ /db_xref="InterPro:IPR004147"
+ /db_xref="InterPro:IPR010232"
+ /db_xref="InterPro:IPR011009"
+ /translation="MTPGEVRRLYCIIRTFLSYGLDELIPRMRFTLPLRLWRYSLFWM
+ PNRHKDKLLGERLRLALQELGPVWIKFGQMLSTRRDLFPPQIADQLALLQDKVAPFDG
+ RLAKAQIEEAMGGLPVEAWFDDFDIQPLASASIAQVHTARLKSNGKDVVIKVIRPDIL
+ PVIQADLKLIYRLARWVPRLLPDGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRR
+ NFENSPMLYIPEVYSDYCSQNMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVKVFF
+ TQVFRDSFFHADMHPGNIFVSYEHPENPQYIGIDCGIVGSLNKEDKRYLAENFIAFFN
+ RDYRKVAELHVDSGWVPPDTNVEDFEFAIRTVCEPIFEKPLAEISFGHVLLNLFNTAR
+ RFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFLESWIKEQVGIPALTRAL
+ KEKAPFWIEKMPEIPELVYDSLRQGKYLQHSVDKIARELQLNHVRQSQSRYLLGIGAT
+ LLLSGSFLLVNRPEWGLMPGWLMVGGVIVWLVGWRKTH"
+ misc_feature complement(3615206..3616834)
+ /gene="ubiB"
+ /locus_tag="SARI_03685"
+ /note="putative ubiquinone biosynthesis protein UbiB;
+ Reviewed; Region: ubiB; PRK04750"
+ /db_xref="CDD:235310"
+ misc_feature complement(3615503..3616825)
+ /gene="ubiB"
+ /locus_tag="SARI_03685"
+ /note="2-polyprenylphenol 6-hydroxylase; Region: UbiB;
+ TIGR01982"
+ /db_xref="CDD:233667"
+ gene complement(3616837..3617442)
+ /locus_tag="SARI_03686"
+ CDS complement(3616837..3617442)
+ /locus_tag="SARI_03686"
+ /inference="protein motif:HMMPfam:IPR010668"
+ /inference="similar to AA sequence:INSD:CAD07921.1"
+ /note="'COG: COG3165 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572633.1"
+ /db_xref="GI:161505521"
+ /db_xref="InterPro:IPR010668"
+ /translation="MPFKPLVTAGIERLLNTFLYRSPALKSARTRLQGKVLRVELKGF
+ STPLVLVFSERQIDVLGAWEGEADCTVITQAGVLPKLRDRQQLAALIRSGELEVQGDI
+ QVVQNFVALADLAEFDPAELLAPYTGDIAAEGISKVVRGGAKFLRHGFQRQQRYAAEA
+ ITEEWRMAPGPLEVAWFAEETAAIESAVDALNTRLEKLEAK"
+ misc_feature complement(3616840..3617442)
+ /locus_tag="SARI_03686"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG3165"
+ /db_xref="CDD:225706"
+ misc_feature complement(3617104..3617400)
+ /locus_tag="SARI_03686"
+ /note="SCP-2 sterol transfer family; Region: SCP2;
+ pfam02036"
+ /db_xref="CDD:216855"
+ gene complement(3617452..3618207)
+ /gene="ubiE"
+ /locus_tag="SARI_03687"
+ CDS complement(3617452..3618207)
+ /gene="ubiE"
+ /locus_tag="SARI_03687"
+ /inference="protein motif:HMMPanther:IPR004033"
+ /inference="protein motif:HMMPfam:IPR004033"
+ /inference="protein motif:HMMTigr:IPR004033"
+ /inference="protein motif:ScanRegExp:IPR004033"
+ /inference="similar to AA sequence:INSD:AAF33422.1"
+ /note="Catalyzes the carbon methylation reaction in the
+ biosynthesis of ubiquinone"
+ /codon_start=1
+ /transl_table=11
+ /product="ubiquinone/menaquinone biosynthesis
+ methyltransferase"
+ /protein_id="YP_001572634.1"
+ /db_xref="GI:161505522"
+ /db_xref="InterPro:IPR004033"
+ /translation="MVEDSQETTHFGFQTVAKEQKADMVAHVFHSVASKYDVMNDLMS
+ FGIHRLWKRFTIDCSGVRRGQTVLDLAGGTGDLTAKFSRMVGETGKVILADINDSMLK
+ MGREKLRNIGVIGNVEYVQANAEALPFPDNTFDCITISFGLRNVTEKEKALRSMFRVL
+ KPGGRLLVLEFSKPIIEPLSKAYDAYSFHILPRIGLMVANDADSYRYLAESIRMHPDQ
+ DTLKVMMQDAGFESVDYYNLTAGVVALHRGYKF"
+ misc_feature complement(3617458..3618168)
+ /gene="ubiE"
+ /locus_tag="SARI_03687"
+ /note="ubiE/COQ5 methyltransferase family; Region:
+ Ubie_methyltran; pfam01209"
+ /db_xref="CDD:110227"
+ misc_feature complement(3617704..3618012)
+ /gene="ubiE"
+ /locus_tag="SARI_03687"
+ /note="S-adenosylmethionine-dependent methyltransferases
+ (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
+ that use S-adenosyl-L-methionine (SAM or AdoMet) as a
+ substrate for methyltransfer, creating the product
+ S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
+ cd02440"
+ /db_xref="CDD:100107"
+ misc_feature complement(order(3617791..3617793,3617836..3617844,
+ 3617920..3617925,3617980..3618000))
+ /gene="ubiE"
+ /locus_tag="SARI_03687"
+ /note="S-adenosylmethionine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:100107"
+ gene complement(3618303..3619718)
+ /locus_tag="SARI_03688"
+ CDS complement(3618303..3619718)
+ /locus_tag="SARI_03688"
+ /inference="protein motif:HMMPfam:IPR003798"
+ /inference="similar to AA sequence:INSD:AAV79586.1"
+ /note="YigN; nuclease that may cleave DNA structures
+ arising during the recombination of short-inverted repeats
+ and thereby prevents the inversion of the internal
+ sequence; transcription is induced by DNA-damaging agents
+ such as nalidixic acid or mitomycin C in a LexA-dependent
+ manner"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA recombination protein RmuC"
+ /protein_id="YP_001572635.1"
+ /db_xref="GI:161505523"
+ /db_xref="InterPro:IPR003798"
+ /translation="MISAVVALAIGAVIGWLATKAHADQIRADLIEERRELDIELSAA
+ RQQLAQEAHWRSECELLNNELRSLHSINTSLEADLREVTTRLEATQQHAEDKIRQMIN
+ SEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLTPLREQLDGFRRQVQESFGKEA
+ QERHTLAHEIRNLQQLNAQMAQEAINLTRALKGDNKAQGNWGEVVLARVLEASGLREG
+ YEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTREAAL
+ QEHIASVRNHIRLLGRKDYQQLPGLRSLDYVLMFIPVEPAFLLALDKQPELITEALKN
+ NIMLVSPTTLLVALRTIANLWRYEHQSRNAQHIADRASKLYDKMRLFVDDMSAIGQSL
+ DKAQDNYRQAMKKLASGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVTQDEEYRLRS
+ IPEGRQDEHYPNDERVKQQLS"
+ misc_feature complement(3618306..3619673)
+ /locus_tag="SARI_03688"
+ /note="DNA recombination protein RmuC; Provisional;
+ Region: PRK10361"
+ /db_xref="CDD:182409"
+ misc_feature complement(3618417..3619328)
+ /locus_tag="SARI_03688"
+ /note="RmuC family; Region: RmuC; pfam02646"
+ /db_xref="CDD:217163"
+ gene complement(3619873..3620634)
+ /locus_tag="SARI_03689"
+ CDS complement(3619873..3620634)
+ /locus_tag="SARI_03689"
+ /inference="protein motif:HMMPfam:IPR000845"
+ /inference="protein motif:HMMTigr:IPR010058"
+ /inference="protein motif:ScanRegExp:IPR000845"
+ /inference="similar to AA sequence:PDB:1ZL2"
+ /note="catalyzes the reversible phosphorylytic cleavage of
+ uridine and deoxyuridine to uracil and ribose- or
+ deoxyribose-1-phosphate; involved in the pyrimidine
+ salvage pathway"
+ /codon_start=1
+ /transl_table=11
+ /product="uridine phosphorylase"
+ /protein_id="YP_001572636.1"
+ /db_xref="GI:161505524"
+ /db_xref="InterPro:IPR000845"
+ /db_xref="InterPro:IPR010058"
+ /translation="MSRSDIFHLGLTKNDLQGAQLAIVPGDPERVEKIAALMDKPVKL
+ ASHREFTSWRAELDGKAVIVCSTGIGGPSTSIAVEELAQLGIRTFLRIGTTGAIQPHI
+ NVGDVLVTTASVRLDGASLHFAPMEFPAVADFACTTALVEAAKSIGATTHVGVTASSD
+ TFYPGQERYDTYSGRVVRRFKGSMEEWQAMGVMNYEMESATLLTMCASQGLRAGMVAG
+ VIVNRTQQEIPNAETMKQTESHAVKIVVEAARRLL"
+ misc_feature complement(3619876..3620625)
+ /locus_tag="SARI_03689"
+ /note="uridine phosphorylase; Provisional; Region:
+ PRK11178"
+ /db_xref="CDD:183018"
+ misc_feature complement(3619876..3620616)
+ /locus_tag="SARI_03689"
+ /note="uridine phosphorylase; Region: Uridine-psphlse;
+ TIGR01718"
+ /db_xref="CDD:130779"
+ gene 3620951..3621706
+ /locus_tag="SARI_03690"
+ CDS 3620951..3621706
+ /locus_tag="SARI_03690"
+ /inference="protein motif:HMMPfam:IPR002925"
+ /inference="similar to AA sequence:INSD:AAO70858.1"
+ /note="'KEGG: stm:STM3967 1.6e-131 dlhH; putative
+ dienelactone hydrolase family K01061;
+ COG: COG0412 Dienelactone hydrolase and related enzymes;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572637.1"
+ /db_xref="GI:161505525"
+ /db_xref="InterPro:IPR002925"
+ /translation="MIHTPAEAISAGITSIPSQGDDMPAYCARPKASDGALPVVIVVQ
+ EIFGVHEHICDICRRLALEGYLAIAPELYFREGDPNDFADIPTLLSGLVTKVPDSQVL
+ ADLDHVASWASRNGGDAHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLVGDTSL
+ NSPKHPVDIATDLNTPVLGLYGGQDTSIPQESVETMRQALRAANAKAEIVVYHDAGHA
+ FNADYRPGYHEASAKDGWQRMLEWFAQYGGKKG"
+ misc_feature 3620981..3621697
+ /locus_tag="SARI_03690"
+ /note="Dienelactone hydrolase and related enzymes
+ [Secondary metabolites biosynthesis, transport, and
+ catabolism]; Region: COG0412"
+ /db_xref="CDD:223489"
+ gene complement(3621783..3623162)
+ /locus_tag="SARI_03691"
+ CDS complement(3621783..3623162)
+ /locus_tag="SARI_03691"
+ /inference="protein motif:HMMPfam:IPR004027"
+ /inference="protein motif:HMMPfam:IPR007197"
+ /inference="similar to AA sequence:INSD:AAL22810.1"
+ /note="'KEGG: syg:sync_2368 2.8e-17 arylsulfatase
+ regulator;
+ COG: COG0641 Arylsulfatase regulator (Fe-S
+ oxidoreductase);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572638.1"
+ /db_xref="GI:161505526"
+ /db_xref="InterPro:IPR004027"
+ /db_xref="InterPro:IPR007197"
+ /translation="MFPDDDKVVFSRGAVGVGEPYFLTEMSDMAVAGCHVMAKPGGAI
+ CNIDCTYCFYLEKEALYPERNKNWRMSDETLEQFIRQHIAAQSGDRVDFAWQGGEPTM
+ MGLPFFRRAIALCEKYADGRKISHALQTNGILINDEWARFFAEHHFLIGLSIDGPAHL
+ HNQYRLNRAGKGTHEQVVAAMARLKAHHVDFNTLTVVGKHNVGHAADVYEFLLAAGSR
+ FIQFIPLVERMSTDSSSVLNLVMPGESAATLAPWTVPSWQYGEFLNQIFDIWVRRDVD
+ RVYVQMFDVALSAWTGRYPVLCVHSETCGHAFALESNGDLYNCDHFVYPEHLLGNIHQ
+ HSIKALNNSERAIAFGEAKRETLTPDCRRCDYRFACHGGCPKHRFAVSPSGYPAHNYL
+ CAGYKHFFKHVTPYMNVWRELLAQGYPMASIMRWLAQDARKDTGAVSRNDPCPCGSGK
+ KYKKCCGKA"
+ misc_feature complement(3621924..3623060)
+ /locus_tag="SARI_03691"
+ /note="anaerobic sulfatase-maturating enzyme; Region:
+ sulfatase_rSAM; TIGR03942"
+ /db_xref="CDD:188457"
+ misc_feature complement(3622407..3623039)
+ /locus_tag="SARI_03691"
+ /note="Radical SAM superfamily. Enzymes of this family
+ generate radicals by combining a 4Fe-4S cluster and
+ S-adenosylmethionine (SAM) in close proximity. They are
+ characterized by a conserved CxxxCxxC motif, which
+ coordinates the conserved iron-sulfur cluster; Region:
+ Radical_SAM; cd01335"
+ /db_xref="CDD:100105"
+ misc_feature complement(order(3622476..3622481,3622575..3622577,
+ 3622704..3622706,3622770..3622778,3622866..3622871,
+ 3622875..3622877,3623004..3623012,3623016..3623018,
+ 3623022..3623024,3623028..3623030))
+ /locus_tag="SARI_03691"
+ /note="FeS/SAM binding site; other site"
+ /db_xref="CDD:100105"
+ misc_feature complement(3621984..3622253)
+ /locus_tag="SARI_03691"
+ /note="radical SAM additional 4Fe4S-binding SPASM domain;
+ Region: rSAM_more_4Fe4S; TIGR04085"
+ /db_xref="CDD:234461"
+ gene complement(3623514..3625778)
+ /locus_tag="SARI_03692"
+ CDS complement(3623514..3625778)
+ /locus_tag="SARI_03692"
+ /inference="protein motif:BlastProDom:IPR002629"
+ /inference="protein motif:HMMPfam:IPR002629"
+ /inference="protein motif:HMMPfam:IPR013215"
+ /inference="protein motif:HMMTigr:IPR006276"
+ /inference="protein motif:superfamily:IPR011254"
+ /note="catalyzes the transfer of a methyl group from
+ 5-methyltetrahydrofolate to homocysteine to form
+ methionine"
+ /codon_start=1
+ /transl_table=11
+ /product="5-methyltetrahydropteroyltriglutamate--
+ homocysteine S-methyltransferase"
+ /protein_id="YP_001572639.1"
+ /db_xref="GI:161505527"
+ /db_xref="InterPro:IPR002629"
+ /db_xref="InterPro:IPR006276"
+ /db_xref="InterPro:IPR011254"
+ /db_xref="InterPro:IPR013215"
+ /translation="MTILTHTLGFPRVGLRRELKKAQESYWAGNATREELLAVGRELR
+ ARHWQQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNNDGSVDIDTLFRIGRG
+ RAPTGEPAAAAEMTKWFNTNYHYMVPEFSKGQQFRLTWTQLLEEVDEALALGHKIKPV
+ LLGPVTYLWLGKVKGEPFDRLTLLKDILPVYQHVLAELAKRGIEWVQIDEPALVLELP
+ QAWLDAFKLAYDALAGQVKLLLTTYFEGVTPNLNTIIALPVQGLHVDLIHGKDDVSEL
+ HQRLPADWLLSAGLINGRNVWRADLPEKYAQINDIVGKRALWVSSSCSLLHSPIDLSV
+ ETRLDAEVKSWFAFALQKCGELALLRDALNSGDTAAVTEWSAPIQARRHSTRVHNVGV
+ EKRLAAITAQDSQRENPYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRGLRLDFKKG
+ NLDANHYRTGIAEHIRQAIIEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGW
+ VQSYGSRCVKPPVVIGDISRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPRE
+ DVTRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLAWGVEA
+ FRINAAAAKDETQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEAFDY
+ PNEIGPGVYDIHSPNVPSVEWIEALLKKAAQRIPAQRLWVNPDCGLKTRGWPETRAAL
+ ANMVKAAHNLRQAE"
+ misc_feature complement(3623523..3625775)
+ /locus_tag="SARI_03692"
+ /note="5-methyltetrahydropteroyltriglutamate--homocysteine
+ S-methyltransferase; Provisional; Region: PRK05222"
+ /db_xref="CDD:235367"
+ misc_feature complement(3624693..3625769)
+ /locus_tag="SARI_03692"
+ /note="CIMS - Cobalamine-independent methonine synthase,
+ or MetE, N-terminal domain_like. Many members have been
+ characterized as
+ 5-methyltetrahydropteroyltriglutamate-homocysteine
+ methyltransferases, EC:2.1.1.14, mostly from bacteria and
+ plants. This enzyme...; Region: CIMS_N_terminal_like;
+ cd03312"
+ /db_xref="CDD:239428"
+ misc_feature complement(order(3625407..3625409,3625413..3625415,
+ 3625428..3625430,3625719..3625721,3625728..3625730))
+ /locus_tag="SARI_03692"
+ /note="THF binding site; other site"
+ /db_xref="CDD:239428"
+ misc_feature complement(3623535..3624500)
+ /locus_tag="SARI_03692"
+ /note="CIMS - Cobalamine-independent methonine synthase,
+ or MetE, C-terminal domain_like. Many members have been
+ characterized as
+ 5-methyltetrahydropteroyltriglutamate-homocysteine
+ methyltransferases, EC:2.1.1.14, mostly from bacteria and
+ plants. This enzyme...; Region: CIMS_C_terminal_like;
+ cd03311"
+ /db_xref="CDD:239427"
+ misc_feature complement(order(3623598..3623603,3623850..3623852,
+ 3623856..3623858,3623982..3623984,3623988..3623990,
+ 3624309..3624311,3624327..3624329,3624480..3624488))
+ /locus_tag="SARI_03692"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:239427"
+ misc_feature complement(order(3623976..3623978,3624096..3624098,
+ 3624228..3624236))
+ /locus_tag="SARI_03692"
+ /note="THF binding site; other site"
+ /db_xref="CDD:239427"
+ misc_feature complement(order(3623601..3623603,3623784..3623786,
+ 3623850..3623852,3623856..3623858))
+ /locus_tag="SARI_03692"
+ /note="zinc-binding site [ion binding]; other site"
+ /db_xref="CDD:239427"
+ gene 3626027..3626980
+ /locus_tag="SARI_03693"
+ CDS 3626027..3626980
+ /locus_tag="SARI_03693"
+ /inference="protein motif:FPrintScan:IPR000847"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="protein motif:HMMPfam:IPR005119"
+ /inference="similar to AA sequence:INSD:AAL22808.1"
+ /note="'KEGG: shn:Shewana3_3435 3.4e-11 transcriptional
+ regulator, LysR family K06022;
+ COG: COG0583 Transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572640.1"
+ /db_xref="GI:161505528"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR005119"
+ /translation="MIEIKHLKTLQALRNSGSLAAAATVLHQTQSALSHQFSDLEQRL
+ GFRLFVRKSQPLRFTPQGEILLQLANQVLPQISRALQACNEPQQTRLRIAIECHSCIQ
+ WLTPALENFRVSWPQVEMDFKSGVTFDPQPALQQGELDLVMTSDILPRSGLHYSPMFD
+ FEVRLVLAPDHPLASKTQITPEDLASETLLIYPVQRSRLDVWRHFLQPAGISPPLKSV
+ DNTLLLIQMVAARMGIAALPHWVVESVERQGLVVTKTLGDGLWSRLYAAVRDGDQRQA
+ VTEAFIRSTRNHACDHLPFVRSAERPIFDAPTAKPGSQPRL"
+ misc_feature 3626027..3626977
+ /locus_tag="SARI_03693"
+ /note="DNA-binding transcriptional regulator MetR;
+ Provisional; Region: PRK15421"
+ /db_xref="CDD:185319"
+ misc_feature 3626036..3626215
+ /locus_tag="SARI_03693"
+ /note="Bacterial regulatory helix-turn-helix protein, lysR
+ family; Region: HTH_1; pfam00126"
+ /db_xref="CDD:215735"
+ misc_feature 3626294..3626875
+ /locus_tag="SARI_03693"
+ /note="The C-terminal substrate binding domain of
+ LysR-type transcriptional regulator metR, which regulates
+ the expression of methionine biosynthetic genes, contains
+ type 2 periplasmic binding fold; Region: PBP2_MetR;
+ cd08441"
+ /db_xref="CDD:176132"
+ misc_feature order(3626339..3626344,3626348..3626353,3626360..3626362,
+ 3626372..3626374,3626378..3626398,3626669..3626686,
+ 3626702..3626707,3626711..3626716)
+ /locus_tag="SARI_03693"
+ /note="putative dimerization interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:176132"
+ gene complement(3626868..3627767)
+ /locus_tag="SARI_03694"
+ CDS complement(3626868..3627767)
+ /locus_tag="SARI_03694"
+ /inference="protein motif:HMMPfam:IPR000620"
+ /inference="protein motif:HMMTigr:IPR004779"
+ /inference="similar to AA sequence:INSD:AAF33429.1"
+ /note="'COG: COG0697 Permeases of the drug/metabolite
+ transporter (DMT) superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572641.1"
+ /db_xref="GI:161505529"
+ /db_xref="InterPro:IPR000620"
+ /db_xref="InterPro:IPR004779"
+ /translation="MALLIITTILWAFSFSLFGEYLAGHVDSYFAVLVRVGLAALVFL
+ PFLRTRGHNLKTISLYMLVGAMQLGIMYMLSFHAYLYLTVSELLLFTVLTPLYITLIY
+ DVMSQRRLRWGYAFSALLAVIGAGIIRYDRVTDHFWIGLLLVQLSNISFAIGMVGYKR
+ LMETCPMPQHNAFAWFYLGAFLVAAVAWSLLGNAQKIPETTLQWSILIFLGVVASGIG
+ YFMWNYGATQVDAGTLGIMNNMHVPAGLLVNLAIWHQQPHWPSFITGAAVILASLWVH
+ RKWVAPRSAQMADDRRRGSASSE"
+ misc_feature complement(3626949..3627737)
+ /locus_tag="SARI_03694"
+ /note="Carboxylate/Amino Acid/Amine Transporter; Region:
+ 2A78; TIGR00950"
+ /db_xref="CDD:233205"
+ misc_feature complement(3626943..3627323)
+ /locus_tag="SARI_03694"
+ /note="EamA-like transporter family; Region: EamA;
+ pfam00892"
+ /db_xref="CDD:216178"
+ gene complement(3627848..3628648)
+ /locus_tag="SARI_03695"
+ CDS complement(3627848..3628648)
+ /locus_tag="SARI_03695"
+ /inference="protein motif:HMMPfam:IPR013200"
+ /inference="protein motif:HMMTigr:IPR000150"
+ /inference="protein motif:HMMTigr:IPR006379"
+ /inference="protein motif:ScanRegExp:IPR000150"
+ /inference="similar to AA sequence:INSD:CAD07930.1"
+ /note="'purine and pyrimidine nucleotides are secondary
+ substrates; yigL expression is regulated by heat shock,
+ osmotic shock and starvation of glucose, phosphate or
+ ammonium'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative sugar phosphatase"
+ /protein_id="YP_001572642.1"
+ /db_xref="GI:161505530"
+ /db_xref="InterPro:IPR000150"
+ /db_xref="InterPro:IPR006379"
+ /db_xref="InterPro:IPR013200"
+ /translation="MYQVVASDLDGTLLSPDHTLSPYAKETLKLLTARGIHFVFATGR
+ HHVDVGQIRDSLEIKSYMITSNGARVHDTDGNLVFTHNLDSDIASDLFGVVNANPDIV
+ TNVYRDDEWFMNRHRPDEMRFFKEAVFNYSLFEPALLEPEGVSKVFFTCDTHEKLLPL
+ EQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVANAMGYSLKECIAFGDGMND
+ AEMLTMAGKGCIMGNAHQRLKDLYPELEVIGINADNAVPHYLRDLFLR"
+ misc_feature complement(3627851..3628648)
+ /locus_tag="SARI_03695"
+ /note="putative hydrolase; Provisional; Region: PRK10976"
+ /db_xref="CDD:182878"
+ misc_feature complement(<3628409..3628639)
+ /locus_tag="SARI_03695"
+ /note="Haloacid dehalogenase-like hydrolases. The haloacid
+ dehalogenase-like (HAD) superfamily includes L-2-haloacid
+ dehalogenase, epoxide hydrolase, phosphoserine
+ phosphatase, phosphomannomutase, phosphoglycolate
+ phosphatase, P-type ATPase, and many others; Region:
+ HAD_like; cd01427"
+ /db_xref="CDD:119389"
+ misc_feature complement(order(3628520..3628525,3628619..3628627))
+ /locus_tag="SARI_03695"
+ /note="active site"
+ /db_xref="CDD:119389"
+ misc_feature complement(3628610..3628627)
+ /locus_tag="SARI_03695"
+ /note="motif I; other site"
+ /db_xref="CDD:119389"
+ misc_feature complement(3628523..3628525)
+ /locus_tag="SARI_03695"
+ /note="motif II; other site"
+ /db_xref="CDD:119389"
+ misc_feature complement(3627959..>3628078)
+ /locus_tag="SARI_03695"
+ /note="Haloacid dehalogenase-like hydrolases. The haloacid
+ dehalogenase-like (HAD) superfamily includes L-2-haloacid
+ dehalogenase, epoxide hydrolase, phosphoserine
+ phosphatase, phosphomannomutase, phosphoglycolate
+ phosphatase, P-type ATPase, and many others; Region:
+ HAD_like; cd01427"
+ /db_xref="CDD:119389"
+ gene complement(3628664..3629680)
+ /locus_tag="SARI_03696"
+ CDS complement(3628664..3629680)
+ /locus_tag="SARI_03696"
+ /inference="protein motif:HMMPfam:IPR000073"
+ /inference="similar to AA sequence:INSD:AAV79578.1"
+ /note="lecithinase B; catalyzes the conversion of
+ 1-lysophosphatidylcholine to glycerophosphocholine; can
+ also hydrolyze 2-acyl glycerophosphoethanolamine and other
+ substrates"
+ /codon_start=1
+ /transl_table=11
+ /product="lysophospholipase L2"
+ /protein_id="YP_001572643.1"
+ /db_xref="GI:161505531"
+ /db_xref="InterPro:IPR000073"
+ /translation="MFQQQKDWETRENAFAAFAMGPLTDFWRQREEAEFIGVGDIPVR
+ FVRFRTDSNDRTIVICPGRIESYVKYAELAYDLFHLGFDIFIIDHRGQGRSGRILSDP
+ HRGHVDHFNDYVEDLAAFWQQEIEPGPWRKRYILAHSMGGAIATLFLQRHRVRCDAIA
+ LTAPMFGIVIRLPSFMVRHILDWAEGHQRIREDYAIGTGQWRALPFGMNALTHSRQRY
+ QRNLRFYADEPQLRVGGPTWHWVREGILAGEQVLAGASDDATPTLLIQAEEERVVDNR
+ THDRFCEIRAAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVEFFNKPNLSSG
+ NRFA"
+ misc_feature complement(3628691..3629680)
+ /locus_tag="SARI_03696"
+ /note="lysophospholipase L2; Provisional; Region:
+ PRK10749"
+ /db_xref="CDD:182697"
+ misc_feature complement(3629315..3629560)
+ /locus_tag="SARI_03696"
+ /note="Putative lysophospholipase; Region: Hydrolase_4;
+ pfam12146"
+ /db_xref="CDD:221442"
+ gene 3629791..3630411
+ /gene="rhtB"
+ /locus_tag="SARI_03697"
+ CDS 3629791..3630411
+ /gene="rhtB"
+ /locus_tag="SARI_03697"
+ /inference="protein motif:HMMPfam:IPR001123"
+ /inference="protein motif:HMMTigr:IPR004778"
+ /inference="similar to AA sequence:INSD:CAD07932.1"
+ /note="'COG: COG1280 Putative threonine efflux protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="homoserine/homoserine lactone efflux protein"
+ /protein_id="YP_001572644.1"
+ /db_xref="GI:161505532"
+ /db_xref="InterPro:IPR001123"
+ /db_xref="InterPro:IPR004778"
+ /translation="MTFEWWFAYLLTSTLLSLSPGSGAINTMTTSINHGYPGAAASIA
+ GLQTGLSINIVLVGVGLGTLFSRSLIAFDILKWAGAAYLIWLGIQQWRAAGAIDLHTL
+ AKTQSRGRLFKRAVFVNLTNPKSIVFLAALFPQFIMPQQPQLAQYLILGVTTIMVDMI
+ VMTGYATLAQRIAAWIKGSKQMKALNKAFGSLFMLVGALLASARHA"
+ misc_feature 3629791..3630405
+ /gene="rhtB"
+ /locus_tag="SARI_03697"
+ /note="homoserine/homoserine lactone efflux protein;
+ Provisional; Region: rhtB; PRK10520"
+ /db_xref="CDD:182514"
+ gene complement(3630451..3631086)
+ /locus_tag="SARI_03698"
+ CDS complement(3630451..3631086)
+ /locus_tag="SARI_03698"
+ /inference="protein motif:HMMPfam:IPR001123"
+ /inference="protein motif:HMMTigr:IPR004778"
+ /inference="similar to AA sequence:SwissProt:Q9L6N7"
+ /note="'COG: COG1280 Putative threonine efflux protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="threonine efflux system"
+ /protein_id="YP_001572645.1"
+ /db_xref="GI:161505533"
+ /db_xref="InterPro:IPR001123"
+ /db_xref="InterPro:IPR004778"
+ /translation="MRVIFMMMLFFTVAMVHIVALMSPGPDFFFVSQTAVSRSRKEAM
+ MGVLGITCGVMVWAGVALLGLHLIIEKMAWLHTIIMVGGGLYLCWMGYQMLRSALKKQ
+ DATVPSPHVELAQSGRSFFKGLLTNLSNPKAIIYFGSVFSLFVGDNVGAAARWGIFAL
+ ITLETLAWFTVVASLFALPKMRRGYQRLAKWIDGFAGALFAGFGIHLIISR"
+ misc_feature complement(3630454..3631071)
+ /locus_tag="SARI_03698"
+ /note="threonine efflux system; Provisional; Region:
+ PRK10229"
+ /db_xref="CDD:236665"
+ gene complement(3631135..3632982)
+ /locus_tag="SARI_03699"
+ CDS complement(3631135..3632982)
+ /locus_tag="SARI_03699"
+ /inference="protein motif:HMMPanther:IPR004589"
+ /inference="protein motif:HMMPfam:IPR001650"
+ /inference="protein motif:HMMPfam:IPR002121"
+ /inference="protein motif:HMMPfam:IPR002857"
+ /inference="protein motif:HMMPfam:IPR011545"
+ /inference="protein motif:HMMSmart:IPR001650"
+ /inference="protein motif:HMMSmart:IPR002121"
+ /inference="protein motif:HMMSmart:IPR014001"
+ /inference="protein motif:HMMTigr:IPR004589"
+ /inference="protein motif:HMMTigr:IPR006293"
+ /note="'functions in blocking illegitimate recombination,
+ enhancing topoisomerase activity, initiating SOS signaling
+ and clearing blocked replication forks; component of the
+ RecF recombinational pathway'"
+ /codon_start=1
+ /transl_table=11
+ /product="ATP-dependent DNA helicase RecQ"
+ /protein_id="YP_001572646.1"
+ /db_xref="GI:161505534"
+ /db_xref="InterPro:IPR001650"
+ /db_xref="InterPro:IPR002121"
+ /db_xref="InterPro:IPR002857"
+ /db_xref="InterPro:IPR004589"
+ /db_xref="InterPro:IPR006293"
+ /db_xref="InterPro:IPR011545"
+ /db_xref="InterPro:IPR014001"
+ /translation="MVNGVNVAQAEVLNLESGAKQVLQETFGYQQFRPGQEAIIDTAL
+ SGRDCLVVMPTGGGKSLCYQIPALLLDGLTVVVSPLISLMKDQVDQLLANGVAAACLN
+ STQSREQQLEVMTGCRTGQIRLLYIAPERLMLDNFLDHLAHWNPVLLAVDEAHCISQW
+ GHDFRPEYAALGQLRQRFPALPFMALTATADDTTRLDIIRLLGLNDPLIQISSFDRPN
+ IRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGL
+ ENAIRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAG
+ RDGLPAEAMLFYDPADMAWLRRCLEEKPAGQLQDIERHKLNAMGAFAEAQTCRRLVLL
+ NYFGEGRQEPCGNCDICLDPPKQYDGLNDAQIALSTIGRVNQRFGMGYVVEVIRGANN
+ QRIRDFGHDKLKVYGMGREKSHEHWVSVIRQLIHLGLVMQNIAQHSALQLTDAARPVL
+ RGDVPLKLAVPRIVALKPRVMQKSFGGNYDRKLFAKLRKLRKAIADEENIPPYVVFND
+ ATLIEMAEQMPITASEMLSVNGVGMRKLERFGKEFMALIRAHVDGDDGE"
+ misc_feature complement(3631144..3632964)
+ /locus_tag="SARI_03699"
+ /note="ATP-dependent DNA helicase RecQ; Provisional;
+ Region: PRK11057"
+ /db_xref="CDD:182933"
+ misc_feature complement(3632431..3632844)
+ /locus_tag="SARI_03699"
+ /note="DEAD-like helicases superfamily. A diverse family
+ of proteins involved in ATP-dependent RNA or DNA
+ unwinding. This domain contains the ATP-binding region;
+ Region: DEXDc; cd00046"
+ /db_xref="CDD:238005"
+ misc_feature complement(3632803..3632817)
+ /locus_tag="SARI_03699"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238005"
+ misc_feature complement(3632518..3632529)
+ /locus_tag="SARI_03699"
+ /note="putative Mg++ binding site [ion binding]; other
+ site"
+ /db_xref="CDD:238005"
+ misc_feature complement(3631948..3632331)
+ /locus_tag="SARI_03699"
+ /note="Helicase superfamily c-terminal domain; associated
+ with DEXDc-, DEAD-, and DEAH-box proteins, yeast
+ initiation factor 4A, Ski2p, and Hepatitis C virus NS3
+ helicases; this domain is found in a wide variety of
+ helicases and helicase related proteins; may...; Region:
+ HELICc; cd00079"
+ /db_xref="CDD:238034"
+ misc_feature complement(order(3632080..3632088,3632161..3632166,
+ 3632224..3632235))
+ /locus_tag="SARI_03699"
+ /note="nucleotide binding region [chemical binding]; other
+ site"
+ /db_xref="CDD:238034"
+ misc_feature complement(order(3631978..3631980,3631987..3631989,
+ 3631999..3632001,3632062..3632064))
+ /locus_tag="SARI_03699"
+ /note="ATP-binding site [chemical binding]; other site"
+ /db_xref="CDD:238034"
+ misc_feature complement(3631459..3631734)
+ /locus_tag="SARI_03699"
+ /note="This DNA-binding domain is found in the RecQ
+ helicase among others and has a helix-turn-helix
+ structure; Region: RQC; smart00956"
+ /db_xref="CDD:214936"
+ misc_feature complement(3631168..>3631323)
+ /locus_tag="SARI_03699"
+ /note="HRDC domain; Region: HRDC; pfam00570"
+ /db_xref="CDD:201312"
+ gene complement(3633050..3633919)
+ /locus_tag="SARI_03700"
+ CDS complement(3633050..3633919)
+ /locus_tag="SARI_03700"
+ /inference="protein motif:Gene3D:IPR003187"
+ /inference="protein motif:HMMPfam:IPR003187"
+ /inference="similar to AA sequence:INSD:AAO70868.1"
+ /note="catalyzes the hydrolysis of phosphatidylcholine"
+ /codon_start=1
+ /transl_table=11
+ /product="phospholipase A"
+ /protein_id="YP_001572647.1"
+ /db_xref="GI:161505535"
+ /db_xref="InterPro:IPR003187"
+ /translation="MRAILSWLLPATLLPLAAYAQEATVKEVHDAPAVQGSIIANMLQ
+ EHDNPFTLYPYDTNYLIYTNTSDLNKEAIRTYNWSENARKDEVKFQLSLAFPLWRGIL
+ GPDSVLGASYTQKSWWQLSNSKESSPFRETNYEPQLFLGFATDYRFAGWTLRDVEMGY
+ NHDSNGRSDPTSRSWNRLYTRLMAENGNWLVEVKPWYVIGSTDDNPDITKYMGYYQLK
+ IGYHLGEAVLSAKGQYNWNTGYGGAELGLSYPVTKHVRLYTQVYSGYGESLIDYNFNQ
+ TRVGVGVMLNDIF"
+ misc_feature complement(3633080..3633772)
+ /locus_tag="SARI_03700"
+ /note="The outer membrane phospholipase A (OMPLA) is an
+ integral membrane enzyme that catalyses the hydrolysis of
+ acylester bonds in phospholipids using calcium as a
+ cofactor. The enzyme has a fold of transmembrane
+ beta-barrels and is widespread among...; Region: OMPLA;
+ cd00541"
+ /db_xref="CDD:238302"
+ misc_feature complement(order(3633533..3633535,3633578..3633580,
+ 3633641..3633643,3633647..3633649,3633764..3633766))
+ /locus_tag="SARI_03700"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238302"
+ misc_feature complement(order(3633155..3633157,3633422..3633424,
+ 3633428..3633430,3633434..3633436,3633533..3633535,
+ 3633542..3633544,3633566..3633568,3633584..3633586,
+ 3633629..3633631,3633635..3633637,3633641..3633643,
+ 3633647..3633649,3633740..3633742))
+ /locus_tag="SARI_03700"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:238302"
+ misc_feature complement(order(3633392..3633394,3633428..3633430,
+ 3633434..3633436))
+ /locus_tag="SARI_03700"
+ /note="active site"
+ /db_xref="CDD:238302"
+ misc_feature complement(order(3633308..3633310,3633404..3633406,
+ 3633413..3633415))
+ /locus_tag="SARI_03700"
+ /note="calcium binding site [ion binding]; other site"
+ /db_xref="CDD:238302"
+ gene 3634084..3634551
+ /locus_tag="SARI_03701"
+ CDS 3634084..3634551
+ /locus_tag="SARI_03701"
+ /inference="protein motif:HMMPfam:IPR006683"
+ /inference="protein motif:HMMTigr:IPR003736"
+ /inference="similar to AA sequence:INSD:AAF33436.1"
+ /note="'COG: COG2050 Uncharacterized protein, possibly
+ involved in aromatic compounds catabolism;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572648.1"
+ /db_xref="GI:161505536"
+ /db_xref="InterPro:IPR003736"
+ /db_xref="InterPro:IPR006683"
+ /translation="MSAVLTAEQALKLVGEMFVYHMPFNRALGLELERYEKAFAQLAF
+ NNQPMMVGNWAQSILHGGVIASALDVAAGLVCVGSTLTRHETISEDELRQRLSRMGTI
+ DLRVDYLRPGRGNRFTATSSLLRAGNKVAVARVELHNEDQLYIASATATYMVG"
+ misc_feature 3634162..3634545
+ /locus_tag="SARI_03701"
+ /note="PaaI_thioesterase is a tetrameric acyl-CoA
+ thioesterase with a hot dog fold and one of several
+ proteins responsible for phenylacetic acid (PA)
+ degradation in bacteria. Although orthologs of PaaI exist
+ in archaea and eukaryotes, their function has not...;
+ Region: PaaI_thioesterase; cd03443"
+ /db_xref="CDD:239527"
+ misc_feature order(3634258..3634260,3634384..3634386,3634405..3634416)
+ /locus_tag="SARI_03701"
+ /note="CoenzymeA binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:239527"
+ misc_feature order(3634261..3634263,3634267..3634269,3634276..3634278,
+ 3634387..3634401,3634405..3634407)
+ /locus_tag="SARI_03701"
+ /note="subunit interaction site [polypeptide binding];
+ other site"
+ /db_xref="CDD:239527"
+ misc_feature order(3634264..3634266,3634288..3634293,3634300..3634305,
+ 3634384..3634386)
+ /locus_tag="SARI_03701"
+ /note="PHB binding site; other site"
+ /db_xref="CDD:239527"
+ gene 3634595..3635491
+ /locus_tag="SARI_03702"
+ CDS 3634595..3635491
+ /locus_tag="SARI_03702"
+ /inference="protein motif:HMMPfam:IPR000620"
+ /inference="protein motif:HMMTigr:IPR004626"
+ /inference="similar to AA sequence:REFSEQ:YP_218841.1"
+ /note="'COG: COG2962 Predicted permeases;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572649.1"
+ /db_xref="GI:161505537"
+ /db_xref="InterPro:IPR000620"
+ /db_xref="InterPro:IPR004626"
+ /translation="MDAKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVI
+ WSFFFMVALLSISRQWRQVKRLLKTPKKIFLLALSAVLVGGNWLLFIWAVNNHHMLEA
+ SLGYFINPLVNILLGMIFLGERFRRMQWLAVILAVCGVLVQLWTFGSLPIIALGLAFS
+ FAFYGLVRKKIAVEAQTGMLVETLWLLPVAAIYLFGIADSATSHMGQNALSLNLLLMA
+ AGVVTTIPLLCFTGAATRLRLSTLGFFQYIGPTLMFLLAVTFYDEHPGADKMVTFGFI
+ WVALAIFVMDALYTQRRTRKGL"
+ misc_feature 3634595..3635482
+ /locus_tag="SARI_03702"
+ /note="putative chloramphenical resistance permease RarD;
+ Provisional; Region: PRK15430"
+ /db_xref="CDD:185328"
+ misc_feature 3634625..3635020
+ /locus_tag="SARI_03702"
+ /note="EamA-like transporter family; Region: EamA;
+ cl17759"
+ /db_xref="CDD:248313"
+ gene 3635687..3636538
+ /locus_tag="SARI_03703"
+ CDS 3635687..3636538
+ /locus_tag="SARI_03703"
+ /inference="similar to AA sequence:INSD:AAN83172.1"
+ /note="'COG: NOG26268 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572650.1"
+ /db_xref="GI:161505538"
+ /translation="MEITHMFNSSMYLPYTLFEPVTRFNDDSAGDMQCGDMGEEELLA
+ LGLNDISEKVDPYRLIHYPFPHPGGIDGYFGSSTSGIKISHSECVDILFTEMKELAGM
+ FSFYGEYRLLIEELIGHFRYGDGSLFYSQQLNSAFHKRINIKTHNNPLLIIKKCIEDE
+ FKNHKREVYIPALLHKIQTKLLRSKLAKFNNLEDRINGLGICVHDIAAQKITLTNFQK
+ YAIGLSATLHFVAQDHFGLDVADIKNKLYREFRFFRIWCFLLRHRDFAFKPFFTNFNT
+ ITRIGSY"
+ misc_feature 3635714..3636526
+ /locus_tag="SARI_03703"
+ /note="Protein of unknown function (DUF3289); Region:
+ DUF3289; cl11840"
+ /db_xref="CDD:159636"
+ gene 3636538..3637014
+ /locus_tag="SARI_03704"
+ CDS 3636538..3637014
+ /locus_tag="SARI_03704"
+ /inference="protein motif:HMMPfam:IPR010351"
+ /inference="similar to AA sequence:INSD:ABG71971.1"
+ /note="'Psort location: extracellular, including cell
+ wall, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572651.1"
+ /db_xref="GI:161505539"
+ /db_xref="InterPro:IPR010351"
+ /translation="MKNKCGKIALYLFLLAGAYNLWTLRPVKVLYAYSDFGSTVFLVV
+ DHLPWTDKDKIRWYLTHREEFKRKYPLLDQDWSTYLMIDIGNGFTNAKDYHDGPYEDL
+ YCFPTIKDDADCIVKDYLLTVDEYPDRNTRFGVTVIDGELEYQLTPEKQIERVFYP"
+ misc_feature 3636538..3637011
+ /locus_tag="SARI_03704"
+ /note="Enterobacterial putative membrane protein (DUF943);
+ Region: DUF943; pfam06092"
+ /db_xref="CDD:218892"
+ gene complement(3637107..3638057)
+ /locus_tag="SARI_03705"
+ CDS complement(3637107..3638057)
+ /locus_tag="SARI_03705"
+ /inference="protein motif:HMMPanther:IPR002523"
+ /inference="protein motif:HMMPfam:IPR002523"
+ /inference="protein motif:HMMTigr:IPR004488"
+ /inference="similar to AA sequence:INSD:CAD07940.1"
+ /note="responsible for the influx of magnesium ions"
+ /codon_start=1
+ /transl_table=11
+ /product="magnesium/nickel/cobalt transporter CorA"
+ /protein_id="YP_001572652.1"
+ /db_xref="GI:161505540"
+ /db_xref="InterPro:IPR002523"
+ /db_xref="InterPro:IPR004488"
+ /translation="MLSAFQLEKNRLTRLEVEESQTLIDAVWIDLVEPDDDERLRVQS
+ ELGQSLATRPELEDIEASARFFEDEDGLHIHSFFFFEDAEDHAGNSTVAFTIRDGRLF
+ TLRERELPAFRLYRMRARSQAMVDGNAYELLLDLFETKIEQLADEIENIYSDLEKLSR
+ VIMEGHQGDEYDEALSTLAELEDIGWKVRLCLMDTQRALNFLVRKARLPGGQLEQARE
+ ILRDIESLLPHNESLFQKVNFLMQAAMGFINIEQNRIIKIFSVVSVVFLPPTLVASSY
+ GMNFEFMPELKWSFGYPGAIIFMILAGLAPYLYFKRKNWL"
+ misc_feature complement(3637110..3638057)
+ /locus_tag="SARI_03705"
+ /note="Mg2+ and Co2+ transporters [Inorganic ion transport
+ and metabolism]; Region: CorA; COG0598"
+ /db_xref="CDD:223671"
+ misc_feature complement(3637110..3637976)
+ /locus_tag="SARI_03705"
+ /note="Escherichia coli Mg2+ transporter CorA_like
+ subgroup; Region: EcCorA-like_1; cd12835"
+ /db_xref="CDD:213369"
+ misc_feature complement(order(3637398..3637400,3637458..3637460,
+ 3637467..3637472,3637629..3637631,3637638..3637640,
+ 3637725..3637730,3637734..3637745,3637785..3637787,
+ 3637827..3637829,3637833..3637835,3637869..3637871,
+ 3637968..3637970))
+ /locus_tag="SARI_03705"
+ /note="Cl binding site [ion binding]; other site"
+ /db_xref="CDD:213369"
+ misc_feature complement(order(3637122..3637124,3637131..3637133,
+ 3637167..3637172,3637179..3637184,3637218..3637241,
+ 3637245..3637262,3637266..3637274,3637278..3637316,
+ 3637320..3637343,3637350..3637358,3637362..3637367,
+ 3637371..3637376,3637383..3637388,3637392..3637397,
+ 3637404..3637409,3637413..3637418,3637443..3637448,
+ 3637455..3637460,3637467..3637472,3637476..3637478,
+ 3637488..3637493,3637497..3637502,3637509..3637514,
+ 3637521..3637526,3637530..3637535,3637581..3637583,
+ 3637590..3637595,3637599..3637604,3637611..3637613,
+ 3637620..3637625,3637632..3637634,3637644..3637646,
+ 3637656..3637658,3637665..3637667,3637704..3637706,
+ 3637716..3637718,3637860..3637862,3637866..3637868,
+ 3637884..3637889,3637896..3637898))
+ /locus_tag="SARI_03705"
+ /note="oligomer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:213369"
+ gene complement(3638528..3640690)
+ /gene="uvrD"
+ /locus_tag="SARI_03706"
+ CDS complement(3638528..3640690)
+ /gene="uvrD"
+ /locus_tag="SARI_03706"
+ /inference="protein motif:HMMPanther:IPR000212"
+ /inference="protein motif:HMMPfam:IPR000212"
+ /inference="protein motif:HMMTigr:IPR005753"
+ /note="unwinds DNA duplexes with 3' to 5' polarity with
+ respect to the bound strand and initiates unwinding most
+ effectively when a single-stranded region is present;
+ involved in the post-incision events of nucleotide
+ excision repair and methyl-directed mismatch repair."
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-dependent helicase II"
+ /protein_id="YP_001572653.1"
+ /db_xref="GI:161505541"
+ /db_xref="InterPro:IPR000212"
+ /db_xref="InterPro:IPR005753"
+ /translation="MDVSYLLDSLNDKQREAVAAPRSNMLVLAGAGSGKTRVLVHRIA
+ WLLSVENNSPYSIMAVTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHH
+ MDANLPQDFQILDSEDQMRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ
+ SYGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNIL
+ VDEFQDTNNIQYAWVRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAQT
+ IRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGVDGEPISLYCAFNELDEARFVV
+ NRIKTWQDNGGALAQCAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDAL
+ SYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKAL
+ AGRAASALQRFMELIDALAQETANMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIEN
+ LEELVTATRQFSYNDEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLE
+ FPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKE
+ VYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPLAENDTGYKLGQRVRHAKFG
+ EGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYAKLETV"
+ misc_feature complement(3638531..3640690)
+ /gene="uvrD"
+ /locus_tag="SARI_03706"
+ /note="DNA-dependent helicase II; Provisional; Region:
+ uvrD; PRK11773"
+ /db_xref="CDD:236976"
+ misc_feature complement(3640415..3640645)
+ /gene="uvrD"
+ /locus_tag="SARI_03706"
+ /note="Part of AAA domain; Region: AAA_19; pfam13245"
+ /db_xref="CDD:222005"
+ misc_feature complement(3638852..>3639022)
+ /gene="uvrD"
+ /locus_tag="SARI_03706"
+ /note="Family description; Region: UvrD_C_2; pfam13538"
+ /db_xref="CDD:222209"
+ gene complement(3640826..3641542)
+ /locus_tag="SARI_03707"
+ CDS complement(3640826..3641542)
+ /locus_tag="SARI_03707"
+ /inference="protein motif:HMMPfam:IPR005834"
+ /inference="protein motif:HMMTigr:IPR006439"
+ /inference="similar to AA sequence:INSD:AAX67755.1"
+ /note="YigB; member of the haloacid dehalogenase
+ (HAD)-like hydrolases superfamily of protein; unknown
+ function"
+ /codon_start=1
+ /transl_table=11
+ /product="flavin mononucleotide phosphatase"
+ /protein_id="YP_001572654.1"
+ /db_xref="GI:161505542"
+ /db_xref="InterPro:IPR005834"
+ /db_xref="InterPro:IPR006439"
+ /translation="MRFYRPLGRIAALTFDLDDTLYDNRPVILRTEQEALAFMQNYHP
+ SLRSFQNIDLQRIRQAVREAEPEIYHDVTRWRHRAIEQAMRDAGLSAQEAIAGANAAM
+ MHFAKWRSQIEVPQATHETLQQLAKKWPLVAITNGNAQPELFGLGDYFKFVLRAGPDG
+ RSKPFSDMYFLAAEKLHVPIGEILHVGDDLTTDVAGAIRCGMQACWIKPEDADLMRTQ
+ DSRLLPHIEISRLASLTSLI"
+ misc_feature complement(3640829..3641542)
+ /locus_tag="SARI_03707"
+ /note="flavin mononucleotide phosphatase; Provisional;
+ Region: PRK10748"
+ /db_xref="CDD:182696"
+ misc_feature complement(3640922..3641215)
+ /locus_tag="SARI_03707"
+ /note="Haloacid dehalogenase-like hydrolases. The haloacid
+ dehalogenase-like (HAD) superfamily includes L-2-haloacid
+ dehalogenase, epoxide hydrolase, phosphoserine
+ phosphatase, phosphomannomutase, phosphoglycolate
+ phosphatase, P-type ATPase, and many others; Region:
+ HAD_like; cd01427"
+ /db_xref="CDD:119389"
+ misc_feature complement(3641138..3641140)
+ /locus_tag="SARI_03707"
+ /note="motif II; other site"
+ /db_xref="CDD:119389"
+ gene complement(3641542..3642444)
+ /gene="xerC"
+ /locus_tag="SARI_03708"
+ CDS complement(3641542..3642444)
+ /gene="xerC"
+ /locus_tag="SARI_03708"
+ /inference="protein motif:Gene3D:IPR013762"
+ /inference="protein motif:HMMPfam:IPR002104"
+ /inference="protein motif:HMMPfam:IPR004107"
+ /inference="protein motif:HMMTigr:IPR011931"
+ /inference="protein motif:superfamily:IPR010998"
+ /inference="protein motif:superfamily:IPR011010"
+ /inference="similar to AA sequence:REFSEQ:YP_218835.1"
+ /note="site-specific tyrosine recombinase which cuts and
+ rejoins DNA molecules; binds cooperatively to specific DNA
+ consensus sites; forms a heterotetrameric complex with
+ XerC; XerCD exhibit similar sequences; essential to
+ convert chromosome dimers to monomers during cell division
+ and functions during plasmid segregation; cell division
+ protein FtsK may regulate the XerCD complex; enzyme from
+ Streptococcus group has unusual active site motifs"
+ /codon_start=1
+ /transl_table=11
+ /product="site-specific tyrosine recombinase XerC"
+ /protein_id="YP_001572655.1"
+ /db_xref="GI:161505543"
+ /db_xref="InterPro:IPR002104"
+ /db_xref="InterPro:IPR004107"
+ /db_xref="InterPro:IPR010998"
+ /db_xref="InterPro:IPR011010"
+ /db_xref="InterPro:IPR011931"
+ /db_xref="InterPro:IPR013762"
+ /translation="MTDVALSQDVSRFLRYLGVERQLSPITLLNYQRQLDAIIALAGE
+ AGLKSWQQCDAVMVRGFAVRSRRKGLGPASLALRLSALRSFFDWLVSQGELKANPAKG
+ VSAPKAPRHLPKNIDVDDVNRLLDIDLNDPLAVRDRAMLEVMYGAGLRLSELVGLDIK
+ HLDLDTGEVWVMGKGSKERRLPIGRNAVTWIEHWLDLRGLFASDEEALFLSKLGKRIS
+ ARNVQKRFAEWGIKQGLNSHVHPHKLRHSFATHMLESSGDLRGVQELLGHANLSTTQI
+ YTHLDFQHLASVYDAAHPRAKRGK"
+ misc_feature complement(3641548..3642432)
+ /gene="xerC"
+ /locus_tag="SARI_03708"
+ /note="Site-specific recombinase XerC [DNA replication,
+ recombination, and repair]; Region: XerC; COG4973"
+ /db_xref="CDD:227307"
+ misc_feature complement(3641578..3642411)
+ /gene="xerC"
+ /locus_tag="SARI_03708"
+ /note="XerD and XerC integrases, DNA breaking-rejoining
+ enzymes, N- and C-terminal domains. XerD-like integrases
+ are involved in the site-specific integration and excision
+ of lysogenic bacteriophage genomes, transposition of
+ conjugative transposons, termination...; Region:
+ INT_XerDC; cd00798"
+ /db_xref="CDD:238413"
+ misc_feature complement(order(3641614..3641616,3641707..3641712,
+ 3641719..3641721,3641995..3641997))
+ /gene="xerC"
+ /locus_tag="SARI_03708"
+ /note="active site"
+ /db_xref="CDD:238413"
+ misc_feature complement(order(3641614..3641616,3641641..3641643,
+ 3641710..3641712,3641719..3641721,3641923..3641925,
+ 3641995..3641997))
+ /gene="xerC"
+ /locus_tag="SARI_03708"
+ /note="Int/Topo IB signature motif; other site"
+ /db_xref="CDD:238413"
+ gene complement(3642441..3643148)
+ /locus_tag="SARI_03709"
+ CDS complement(3642441..3643148)
+ /locus_tag="SARI_03709"
+ /inference="protein motif:HMMPfam:IPR007435"
+ /inference="protein motif:superfamily:IPR001533"
+ /inference="similar to AA sequence:REFSEQ:NP_807017.1"
+ /note="'KEGG: azo:azo0595 2.5e-06 3',5'-cyclic-nucleotide
+ phosphodiesterase K01120;
+ COG: COG3159 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572656.1"
+ /db_xref="GI:161505544"
+ /db_xref="InterPro:IPR001533"
+ /db_xref="InterPro:IPR007435"
+ /translation="MKQPEEELQETLTELDDRAVLDYLRRHPEFFVRNAHAVEAMRVP
+ HPVRGTVSLVEWHMARARNHIHALEENMTLLMEQAHANESLFYRLLHLQSRLAAADSL
+ DELLMRFHRWAREQGLAGATLRLFPDRWRLGAPSRYTHLALNRQAFEPLRIQRLRQSQ
+ HYLGPLNGPELLVVLPEAKAIGSVAMSMLGRDGDLGVVLFSSRDVHHYQPGQGTQFLQ
+ EIALMLPELLERWIARV"
+ misc_feature complement(3642444..3643103)
+ /locus_tag="SARI_03709"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10963"
+ /db_xref="CDD:236808"
+ gene complement(3643145..3643972)
+ /gene="dapF"
+ /locus_tag="SARI_03710"
+ CDS complement(3643145..3643972)
+ /gene="dapF"
+ /locus_tag="SARI_03710"
+ /inference="protein motif:HMMPfam:IPR001653"
+ /inference="protein motif:HMMTigr:IPR001653"
+ /inference="protein motif:ScanRegExp:IPR001653"
+ /inference="similar to AA sequence:INSD:AAX67752.1"
+ /note="involved in lysine biosynthesis; DAP epimerase;
+ produces DL-diaminopimelate from LL-diaminopimelate"
+ /codon_start=1
+ /transl_table=11
+ /product="diaminopimelate epimerase"
+ /protein_id="YP_001572657.1"
+ /db_xref="GI:161505545"
+ /db_xref="InterPro:IPR001653"
+ /translation="MMQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLSDRHLGVGFD
+ QLLVVEPPYDPELDFHYRIFNADGSEVSQCGNGARCFARFVRLKGLTNKRDIRVSTTN
+ GRIVLSVTEDELVRVNMGEPNFEPAQVPFRANKAEKTYIMRAAEQTILCGVVSMGNPH
+ CVIQVDNVDTAAVDTLGPVLESHERFPERANIGFMQVVRREHIRLRVYERGAGETRAC
+ GSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAAHVYDGFIHL"
+ misc_feature complement(3643148..3643972)
+ /gene="dapF"
+ /locus_tag="SARI_03710"
+ /note="diaminopimelate epimerase; Provisional; Region:
+ dapF; PRK00450"
+ /db_xref="CDD:234768"
+ misc_feature complement(3643601..3643963)
+ /gene="dapF"
+ /locus_tag="SARI_03710"
+ /note="Diaminopimelate epimerase; Region: DAP_epimerase;
+ pfam01678"
+ /db_xref="CDD:216645"
+ misc_feature complement(3643169..3643513)
+ /gene="dapF"
+ /locus_tag="SARI_03710"
+ /note="Diaminopimelate epimerase; Region: DAP_epimerase;
+ pfam01678"
+ /db_xref="CDD:216645"
+ gene complement(3644006..3644209)
+ /locus_tag="SARI_03711"
+ CDS complement(3644006..3644209)
+ /locus_tag="SARI_03711"
+ /inference="protein motif:superfamily:IPR012338"
+ /inference="similar to AA sequence:INSD:AAO70879.1"
+ /note="'COG: COG5567 Predicted small periplasmic
+ lipoprotein;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572658.1"
+ /db_xref="GI:161505546"
+ /db_xref="InterPro:IPR012338"
+ /translation="MKNVFKTLAVLLTLFSLTGCGLKGPLYFPPADKNTPPPTKKVDS
+ QTQSTLPDKNDRATGDGPSQVNY"
+ misc_feature complement(3644021..3644209)
+ /locus_tag="SARI_03711"
+ /note="Predicted small periplasmic lipoprotein [Cell
+ motility and secretion]; Region: COG5567"
+ /db_xref="CDD:227854"
+ gene 3644347..3644667
+ /gene="cyaY"
+ /locus_tag="SARI_03712"
+ CDS 3644347..3644667
+ /gene="cyaY"
+ /locus_tag="SARI_03712"
+ /inference="protein motif:BlastProDom:IPR002908"
+ /inference="protein motif:HMMPfam:IPR002908"
+ /inference="protein motif:ScanRegExp:IPR002908"
+ /inference="similar to AA sequence:SwissProt:Q8Z3A4"
+ /note="defects in the mitochondrial frataxin protein cause
+ Friedreich ataxis which is an autosomal recessive
+ neurodegenerative disease; based on phylogenomic
+ distribution this protein may have a role in iron-sulfur
+ cluster protein assembly"
+ /codon_start=1
+ /transl_table=11
+ /product="frataxin-like protein"
+ /protein_id="YP_001572659.1"
+ /db_xref="GI:161505547"
+ /db_xref="InterPro:IPR002908"
+ /translation="MNDSEFHRLADTLWLTIEERLDNWDGDSDIDCEINGGVLTLSFE
+ NGSKIIINRQEPLHQVWLATKQGGYHFDLKGDEWICDRSGATFWDLLEQAATQQAGEA
+ VSFR"
+ misc_feature 3644347..3644661
+ /gene="cyaY"
+ /locus_tag="SARI_03712"
+ /note="Frataxin is a nuclear-encoded mitochondrial protein
+ implicated in Friedreich's ataxia (FRDA), an human
+ autosomal recessive neurodegenerative disease; Frataxin is
+ found in eukaryotes and in purple bacteria; lack of
+ frataxin causes iron to accumulate...; Region: Frataxin;
+ cd00503"
+ /db_xref="CDD:238280"
+ misc_feature order(3644353..3644355,3644377..3644382,3644389..3644391,
+ 3644401..3644403,3644410..3644415,3644431..3644433,
+ 3644437..3644439)
+ /gene="cyaY"
+ /locus_tag="SARI_03712"
+ /note="putative iron binding site [ion binding]; other
+ site"
+ /db_xref="CDD:238280"
+ gene complement(3644763..3647309)
+ /gene="cyaA"
+ /locus_tag="SARI_03713"
+ CDS complement(3644763..3647309)
+ /gene="cyaA"
+ /locus_tag="SARI_03713"
+ /inference="protein motif:HMMPfam:IPR000274"
+ /inference="protein motif:HMMPIR:IPR000274"
+ /inference="protein motif:ScanRegExp:IPR000274"
+ /note="catalyzes transfer of adenylyl group of ATP from
+ pyrophosphate to the 3'-hydroxyl group to form cyclic AMP"
+ /codon_start=1
+ /transl_table=11
+ /product="adenylate cyclase"
+ /protein_id="YP_001572660.2"
+ /db_xref="GI:228879512"
+ /db_xref="InterPro:IPR000274"
+ /translation="MYLYIETLKQRLDAINQLRVDRALAAMGPAFQQVYSLLPTLLHY
+ HHPLMPGYLDGNVPSGICFYKPDETQRHYLNELELYRGMTPEDPPKGELPITGVYTMG
+ STSSVGQSCSSDLDIWVCHQAWLDGEERQLLQRKCSLLESWAASLGVEVSFFLIDENR
+ FRHNESGSLGGEDCGSTQHILLLDEFYRTAVRLAGKRILWSMVPCDEEEHYDDYVMTL
+ YAQGVLTPNEWLDLGGLSSLSAEEYFGASLWQLYKSIDSPYKAVLKTLLLEAYSWEYP
+ NPRLLAKDIKQRLHDGEIVSFGLDPYCMMLERVTEYLTAIEDPTRLDLVRRCFYLKVC
+ EKLSRERACVGWRREVLSQLVSEWGWGDARLAMLDNRANWKIDQVREAHNELLDAMMQ
+ SYRNLIRFARRNNLSVSASPQDIGVLTRKLYAAFEALPGKVTLVNPQISPDLSEPNLT
+ FIHVPPGRANRSGWYLYNRAPNMDSIISHQPLEYNRYLNKLVAWAWFNGLLTSRTHLF
+ IKGNGIVDLPKLQEMVADVSHHFPLRLPAPTPKALYSPCEIRHLAIIVNLEYDPTAAF
+ RNKVVHFDFRKLDVFSFGEEQNCLVGSIDLLYRNSWNEVRTLHFNGEQAMIEALKTIL
+ GKMHQDAAPPDSVEVFCYSQHLRGLIRTRVQQLVSECIELRLSSTRQETGRFKALRVS
+ GQTWGLFFERLNVSVQKLENAIEFYGAISHNKLHGLSVQVETNHVKLPSVVDGFASEG
+ IIQFFFEETGDEKGFNIYILDESNRAEVYHHCEGSKEELVRDVSRFYSSSHDRFTYGS
+ SFINFNLPQFYQIVKTDGRAQVIPFRTQPINTVPPANQDHDAPLLQQYFL"
+ misc_feature complement(3644769..3647309)
+ /gene="cyaA"
+ /locus_tag="SARI_03713"
+ /note="Adenylate cyclase [Nucleotide transport and
+ metabolism]; Region: CyaA; COG3072"
+ /db_xref="CDD:225614"
+ misc_feature complement(3646710..3647309)
+ /gene="cyaA"
+ /locus_tag="SARI_03713"
+ /note="Adenylate cyclase NT domain; Region: Adenyl_cycl_N;
+ pfam12633"
+ /db_xref="CDD:221677"
+ misc_feature complement(3644838..3646628)
+ /gene="cyaA"
+ /locus_tag="SARI_03713"
+ /note="Adenylate cyclase, class-I; Region: Adenylate_cycl;
+ pfam01295"
+ /db_xref="CDD:216418"
+ unsure 3647475..3647498
+ /note="Sequence derived from one plasmid subclone"
+ gene 3647686..3648627
+ /gene="hemC"
+ /locus_tag="SARI_03714"
+ CDS 3647686..3648627
+ /gene="hemC"
+ /locus_tag="SARI_03714"
+ /inference="protein motif:BlastProDom:IPR000860"
+ /inference="protein motif:Gene3D:IPR000860"
+ /inference="protein motif:HMMPanther:IPR000860"
+ /inference="protein motif:HMMPfam:IPR000860"
+ /inference="protein motif:HMMTigr:IPR000860"
+ /inference="protein motif:ScanRegExp:IPR000860"
+ /inference="protein motif:superfamily:IPR000860"
+ /inference="similar to AA sequence:INSD:AAV79556.1"
+ /note="transformation of porphobilinogen to
+ hydroxymethylbilane in porphyrin biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="porphobilinogen deaminase"
+ /protein_id="YP_001572661.1"
+ /db_xref="GI:161505549"
+ /db_xref="InterPro:IPR000860"
+ /translation="MLDNVLKIATRQSPLALWQAHYVKDALMATHPGLTVELVPMVTR
+ GDVILDTPLAKVGGKGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICERE
+ DPRDAFVSNQYHSLDDLPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLD
+ NGDYDAIILAVAGLKRLGLASRIRTALPPEVSLPAVGQGAIGIECRLDDARTHALLAP
+ LNHPQTALRVTAERAMNTRLEGGCQVPIGSYAEIFNGEIWLRALVGAPDGSVMVRGER
+ RGSPEQAEQMGISLAEELLENGARAILTAVYNGEAPA"
+ misc_feature 3647695..3648573
+ /gene="hemC"
+ /locus_tag="SARI_03714"
+ /note="porphobilinogen deaminase; Reviewed; Region: hemC;
+ PRK00072"
+ /db_xref="CDD:234612"
+ misc_feature 3647701..3648573
+ /gene="hemC"
+ /locus_tag="SARI_03714"
+ /note="Hydroxymethylbilane synthase (HMBS), also known as
+ porphobilinogen deaminase (PBGD), is an intermediate
+ enzyme in the biosynthetic pathway of tetrapyrrolic ring
+ systems, such as heme, chlorophylls, and vitamin B12.
+ HMBS catalyzes the conversion of...; Region: HMBS;
+ cd00494"
+ /db_xref="CDD:238276"
+ misc_feature order(3647722..3647724,3647737..3647739,3647929..3647946,
+ 3647950..3647952,3647977..3647982,3647986..3648003,
+ 3648076..3648078,3648082..3648087,3648097..3648099,
+ 3648136..3648138,3648199..3648201,3648208..3648213,
+ 3648259..3648282,3648334..3648336,3648355..3648357,
+ 3648364..3648366,3648376..3648381,3648388..3648390,
+ 3648409..3648411,3648421..3648423,3648427..3648429,
+ 3648463..3648465,3648478..3648480,3648487..3648489,
+ 3648496..3648498,3648502..3648504)
+ /gene="hemC"
+ /locus_tag="SARI_03714"
+ /note="domain interfaces; other site"
+ /db_xref="CDD:238276"
+ misc_feature order(3647728..3647730,3647740..3647742,3647926..3647928,
+ 3647932..3647937,3648064..3648072,3648076..3648081,
+ 3648127..3648129,3648148..3648150,3648187..3648195,
+ 3648202..3648204,3648211..3648213,3648268..3648270,
+ 3648277..3648282,3648409..3648411)
+ /gene="hemC"
+ /locus_tag="SARI_03714"
+ /note="active site"
+ /db_xref="CDD:238276"
+ gene 3648624..3649364
+ /gene="hemD"
+ /locus_tag="SARI_03715"
+ CDS 3648624..3649364
+ /gene="hemD"
+ /locus_tag="SARI_03715"
+ /inference="protein motif:HMMPfam:IPR003754"
+ /inference="protein motif:superfamily:IPR003754"
+ /inference="similar to AA sequence:REFSEQ:YP_152867.1"
+ /note="catalyzes the formation of uroporphyrinogen-III
+ from hydroxymethylbilane; functions in tetrapyrrole and
+ heme biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="uroporphyrinogen-III synthase"
+ /protein_id="YP_001572662.1"
+ /db_xref="GI:161505550"
+ /db_xref="InterPro:IPR003754"
+ /translation="MSILVTRPSPAGEALVSRLRALGQVAWSFPLIEFVAGRELPTLA
+ DRLSTLTENDLVFALSQHAVAFAHAQLQQAGRYWPASPRYFAIGRTTALALHTVNGFD
+ IRYPLDREISEVLLQLPELQNIAGKRALILRGNGGRELLGETLTARGAEVSFCECYQR
+ CVKHYDGAEEAMRWHARGVTTLVVTSGEMLQQLWSLIPQWYREHWLLRCRLLVVSERL
+ AYLARELGWQDIKVADNADNDALLRALQ"
+ misc_feature 3648624..3649319
+ /gene="hemD"
+ /locus_tag="SARI_03715"
+ /note="uroporphyrinogen-III synthase; Reviewed; Region:
+ hemD; PRK05928"
+ /db_xref="CDD:235647"
+ misc_feature 3648630..3649319
+ /gene="hemD"
+ /locus_tag="SARI_03715"
+ /note="Uroporphyrinogen-III synthase (HemD) catalyzes the
+ asymmetrical cyclization of tetrapyrrole (linear) to
+ uroporphyrinogen-III, the fourth step in the biosynthesis
+ of heme. This ubiquitous enzyme is present in eukaryotes,
+ bacteria and archaea. Mutations in...; Region: HemD;
+ cd06578"
+ /db_xref="CDD:119440"
+ misc_feature order(3648642..3648644,3648801..3648809,3648891..3648893,
+ 3649023..3649025,3649095..3649097,3649101..3649103,
+ 3649176..3649190)
+ /gene="hemD"
+ /locus_tag="SARI_03715"
+ /note="active site"
+ /db_xref="CDD:119440"
+ gene 3649386..3650555
+ /locus_tag="SARI_03716"
+ CDS 3649386..3650555
+ /locus_tag="SARI_03716"
+ /inference="protein motif:HMMPfam:IPR007470"
+ /inference="similar to AA sequence:REFSEQ:NP_457815.1"
+ /note="'KEGG: sty:STY3623 1.5e-192 hemX; uroporphyrinogen
+ III methylase K02496;
+ COG: COG2959 Uncharacterized enzyme of heme biosynthesis;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative uroporphyrinogen III
+ C-methyltransferase"
+ /protein_id="YP_001572663.1"
+ /db_xref="GI:161505551"
+ /db_xref="InterPro:IPR007470"
+ /translation="MTEQEKSSAVVDETRETVETTPQPVNTEKKSKNGAALILSAVAI
+ AIALAAGIGLYGWGKQQATTQTETSDALANQLTALQKAQESQKAELEGIIKKQAMQLD
+ DANRQQATMAKQLDELQQKVATISGSDAKTWLLAQADFLVKLAGRKLWSDQDVTTAAA
+ LLKSADASLADMNDPSLITARRAITDDIASLSSVAQVDYDGIILKLNQLSNQIDNLRL
+ ADNDTDDSPMDSDSSELSSSLSEWRVNLQKSWQNFMDSFITIRRRDDTAVPLLAPNQD
+ VYLRENIRSRLLVAAQAVPRHQEETYRQALDNVSTWVRAYYDTDDAATKAFLEEVDKL
+ SQQNITMDLPETLQSQAILEKLMQTRVRNLLAQPTASTEAPATQTDAPAAAPQGE"
+ misc_feature 3649386..3650504
+ /locus_tag="SARI_03716"
+ /note="putative uroporphyrinogen III C-methyltransferase;
+ Provisional; Region: PRK10920"
+ /db_xref="CDD:236795"
+ misc_feature 3649449..3650501
+ /locus_tag="SARI_03716"
+ /note="Uncharacterized enzyme of heme biosynthesis
+ [Coenzyme metabolism]; Region: HemX; COG2959"
+ /db_xref="CDD:225507"
+ gene 3650555..3651754
+ /locus_tag="SARI_03717"
+ CDS 3650555..3651754
+ /locus_tag="SARI_03717"
+ /inference="protein motif:Gene3D:IPR011990"
+ /inference="protein motif:HMMPfam:IPR010817"
+ /inference="protein motif:HMMPfam:IPR013105"
+ /inference="protein motif:HMMTigr:IPR005254"
+ /inference="similar to AA sequence:INSD:AAL22780.1"
+ /note="'KEGG: pfo:Pfl_0690 0.0075 exodeoxyribonuclease V,
+ alpha subunit K03581;
+ COG: COG3071 Uncharacterized enzyme of heme biosynthesis;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative protoheme IX biogenesis protein"
+ /protein_id="YP_001572664.1"
+ /db_xref="GI:161505552"
+ /db_xref="InterPro:IPR005254"
+ /db_xref="InterPro:IPR010817"
+ /db_xref="InterPro:IPR011990"
+ /db_xref="InterPro:IPR013105"
+ /translation="MMLKVLLLFVLLLAGIVVGPMLAGHQGYVLIQTDNYNIETSVTG
+ LAIILIVAMVVLFAIEWLLRRLFRTGAHTRGWFAGRKRRRARKQTEQALLKLAEGDYQ
+ QVEKLMSKNADHAEQPVVNYLLAAEAAQQRGDEARANQHLERAAELAGNDTIPVEITR
+ VRLQLARNENHAARHGVDKLLEVTPRHPEVLRLAEQAYIRTSAWSSLLDIIPSMAKAH
+ VGDEAHRAMLEQQAWIGLMDQARAEQGSEGLRTWWKNQSRKTRHQVALQVAMAEHLIE
+ CDDHDMAQQIIIDGLKRQYDDRLVLPIPRLRTNNPEQLEKVLRQQIKTVGDRPLLWST
+ LGQSLMKHGEWQEATLAFRAALKQRPDAYDYAWLADALDRLHQPEEAAIMRRDGLMLT
+ LQNNPPQ"
+ misc_feature 3650609..3651751
+ /locus_tag="SARI_03717"
+ /note="putative protoheme IX biogenesis protein;
+ Provisional; Region: PRK10747"
+ /db_xref="CDD:182695"
+ misc_feature 3650633..3650956
+ /locus_tag="SARI_03717"
+ /note="HemY protein N-terminus; Region: HemY_N; pfam07219"
+ /db_xref="CDD:191703"
+ unsure 3650729..3650748
+ /locus_tag="SARI_03717"
+ /note="Sequence derived from one plasmid subclone"
+ unsure 3651618..3651714
+ /locus_tag="SARI_03717"
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(3651856..3652030)
+ /locus_tag="SARI_03718"
+ misc_RNA complement(3651856..3652030)
+ /locus_tag="SARI_03718"
+ /product="SraJ RNA"
+ /inference="nucleotide motif:Rfam:RF00083"
+ /note="Rfam score 214.17"
+ gene complement(3652340..3652413)
+ /locus_tag="SARI_03719"
+ tRNA complement(3652340..3652413)
+ /locus_tag="SARI_03719"
+ /product="tRNA-Pro"
+ gene complement(3652458..3652541)
+ /locus_tag="SARI_03720"
+ tRNA complement(3652458..3652541)
+ /locus_tag="SARI_03720"
+ /product="tRNA-Leu"
+ gene complement(3652565..3652637)
+ /locus_tag="SARI_03721"
+ tRNA complement(3652565..3652637)
+ /locus_tag="SARI_03721"
+ /product="tRNA-His"
+ gene complement(3652695..3652768)
+ /locus_tag="SARI_03722"
+ tRNA complement(3652695..3652768)
+ /locus_tag="SARI_03722"
+ /product="tRNA-Arg"
+ gene complement(3652871..3654256)
+ /locus_tag="SARI_03723"
+ CDS complement(3652871..3654256)
+ /locus_tag="SARI_03723"
+ /inference="protein motif:HMMPanther:IPR002293"
+ /inference="protein motif:HMMPfam:IPR004841"
+ /inference="protein motif:ScanRegExp:IPR004840"
+ /inference="similar to AA sequence:INSD:AAF33457.1"
+ /note="uncharacterized member of the amino
+ acid-polyamine-organocation (APC) superfamily of amino
+ acid transporters; unknown function"
+ /codon_start=1
+ /transl_table=11
+ /product="putative transport protein YifK"
+ /protein_id="YP_001572665.1"
+ /db_xref="GI:161505553"
+ /db_xref="InterPro:IPR002293"
+ /db_xref="InterPro:IPR004840"
+ /db_xref="InterPro:IPR004841"
+ /translation="MAEKKTELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGPS
+ VLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYMSPFFGYLTAWSYWFMWMA
+ VGISEITAIGVYVQFWFPEMAQWIPALIAVGLVALANLAAVRLYGEIEFWFAMIKVTT
+ IIVMIIIGLGVIFFGFGNGGQAIGFGNLTGHGGFFAGGWKGFLTALCIVVASYQGVEL
+ IGITAGEAKNPQVTLRSAVGNVLWRILIFYVGAIFVIVTIFPWNEIGSNGSPFVLTFA
+ KIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALAKNRQLPAAVAKVSRHGVPVA
+ GVALSILILLVGSCLNYIIPNPQRVFVYVYSASVLPGMVPWFVILISQLRFRQAHKEA
+ IADHPFRSIMFPWANYLTMAFLVCVLIGMYFNEDTRMSLFVGVIFLLVVTLVYKVFCL
+ NRHGTTHKVGE"
+ misc_feature complement(3652874..3654256)
+ /locus_tag="SARI_03723"
+ /note="putative transport protein YifK; Provisional;
+ Region: PRK10746"
+ /db_xref="CDD:182694"
+ gene complement(3654463..3655203)
+ /locus_tag="SARI_03724"
+ CDS complement(3654463..3655203)
+ /locus_tag="SARI_03724"
+ /inference="protein motif:HMMPfam:IPR004629"
+ /inference="protein motif:HMMTigr:IPR004629"
+ /inference="similar to AA sequence:REFSEQ:YP_218821.1"
+ /note="'KEGG: sec:SC3834 4.7e-125 wecG; putative
+ UDP-N-acetyl-D-mannosaminuronic acid transferase K02852;
+ COG: COG1922 Teichoic acid biosynthesis proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative UDP-N-acetyl-D-mannosaminuronic acid
+ transferase"
+ /protein_id="YP_001572666.1"
+ /db_xref="GI:161505554"
+ /db_xref="InterPro:IPR004629"
+ /translation="MTNNAAAPLYSLRGLPLIGWRDMPHALNYLFADGQLKQGTLVAI
+ NAEKLLTAEDNPDVRALIAAAEFKYADGISVVRSIRKKFPQAQVSRVAGADLWEALMA
+ RAGKEGTPVFLIGGKPEVLAQTEEKLRAQWNVNIVGSQDGYFTPEQSQALFARIHASG
+ AQIVTVAMGSPKQEIVMHDCREVHPHALYMGVGGTYDVFTGHVKRAPKIWQNLGLEWL
+ YRLLSQPSRITRQMRLLRYLRWHYTDDL"
+ misc_feature complement(3654466..3655203)
+ /locus_tag="SARI_03724"
+ /note="Teichoic acid biosynthesis proteins [Cell envelope
+ biogenesis, outer membrane]; Region: WecG; COG1922"
+ /db_xref="CDD:224833"
+ misc_feature complement(3654493..3655020)
+ /locus_tag="SARI_03724"
+ /note="The glycosyltransferase WecG/TagA superfamily
+ contains Escherichia coli WecG, Bacillus subtilis TagA and
+ related proteins. E. coli WecG is believed to be a
+ UDP-N-acetyl-D-mannosaminuronic acid transferase, and is
+ involved in enterobacterial common...; Region:
+ Glyco_transf_WecG_TagA; cd06533"
+ /db_xref="CDD:119439"
+ gene complement(3655200..3656558)
+ /locus_tag="SARI_03725"
+ CDS complement(3655200..3656558)
+ /locus_tag="SARI_03725"
+ /inference="protein motif:HMMPfam:IPR010691"
+ /inference="similar to AA sequence:REFSEQ:YP_152862.1"
+ /note="enterobacterial common antigen polymerase"
+ /codon_start=1
+ /transl_table=11
+ /product="putative common antigen polymerase"
+ /protein_id="YP_001572667.1"
+ /db_xref="GI:161505555"
+ /db_xref="InterPro:IPR010691"
+ /translation="MNLMQFSGLLVVWLLSTLFIATLTWFEFRRVRFNFNVFFSLLFL
+ LTFFFGFPLTSVLVFRFDVGVAPPEILLQALLSAACFYGVYYVTYKTRLRKRVVDVTR
+ KPLFTMNRVETHLTWVILMGIALVSVGIFFMHNGFLLFRLHSYSQIFSSEVSGVALKR
+ FFYFFIPAMLVVYFLRQDSKAWLFFLVSTVAFGLLTYMIVGGTRANIIIAFAIFLFIG
+ IIRGWISLWMLAAAGVLGIVGMFWLALKRYGLNVSGDEAFYTFLYLTRDTFSPWENLA
+ LLLQNYHNIDFQGLAPIVRDFYVFIPTWLWPGRPSIVLNSANYFTWEVLNNHSGLAIS
+ PTLIGSLVVMGGALFIPLGAIVVGLIIKWFDWLYELGNREPNRYKAAILHSFCFGAIF
+ NMIVLAREGLDSFVSRVVFFLVVFGASLLVAKLLFWLFDSAGLIHKRTTSLPQAQVER
+ KL"
+ misc_feature complement(3655212..3656558)
+ /locus_tag="SARI_03725"
+ /note="putative common antigen polymerase; Provisional;
+ Region: PRK02975"
+ /db_xref="CDD:179518"
+ gene complement(3656555..3657634)
+ /locus_tag="SARI_03726"
+ CDS complement(3656555..3657634)
+ /locus_tag="SARI_03726"
+ /inference="protein motif:HMMPfam:IPR009993"
+ /inference="similar to AA sequence:REFSEQ:YP_152861.1"
+ /note="catalyzes the synthesis of a lipid-linked
+ intermediate involved in ECA synthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="4-alpha-L-fucosyltransferase"
+ /protein_id="YP_001572668.1"
+ /db_xref="GI:161505556"
+ /db_xref="InterPro:IPR009993"
+ /translation="MTVLIHVLGSDIPHHNHTVLRFFNDTLASTNEHAREFMVAGEDN
+ GFTESCPALSLRFYGSKKALAQAVIAKAKANRRQRFFFHGQFNTSLWLALLSGGIKPA
+ QFYWHIWGADLYEASSGLKFRFFYPIRRIAQGRVGGVFATRGDLSYFARQHPGVRGEL
+ LYFPTRMDPSLNSLAIECQRAGKLTILVGNSGDRSNEHITALRAVHQQFGDTVNVVVP
+ MGYPANNQAYIDEVRQEGLALFSAENLQILSEKMEFDAYLALLRQCDLGYFIFARQQG
+ IGTLCLLIQANIPCVLNRDNPFWQDMAEQHLPVLFTTDDLSERVVREAQRQLASVDKS
+ GITFFSPNYLQPWHNALRIAAGEAE"
+ misc_feature complement(3656564..3657634)
+ /locus_tag="SARI_03726"
+ /note="4-alpha-L-fucosyltransferase glycosyl transferase
+ group 56; Region: Glyco_transf_56; pfam07429"
+ /db_xref="CDD:116050"
+ gene complement(3657631..3658881)
+ /locus_tag="SARI_03727"
+ CDS complement(3657631..3658881)
+ /locus_tag="SARI_03727"
+ /inference="protein motif:HMMPfam:IPR002797"
+ /inference="similar to AA sequence:INSD:CAD09390.1"
+ /note="'COG: COG2244 Membrane protein involved in the
+ export of O-antigen and teichoic acid;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572669.1"
+ /db_xref="GI:161505557"
+ /db_xref="InterPro:IPR002797"
+ /translation="MSLAKASLWTAVSTLVKIGAGLLVVKLLAVSFGPAGVGLAGNFR
+ QMITVLGVLAGAGIFNGVTKLVAQHHNDPAQLRTVVGTSSAMVLGFSTLLALIFLLAA
+ APISQGLFGHTHYQGLVRLVALVQMGIAWANLLLALMKGFRDASGNALSLIFGSLIGV
+ VAYYFCYRLGGYEGALFGLALVPALVVAPAGMMLIKRGAIPLRYLKPSWDDGLAGQLS
+ KFTLMALITSVTMPVAYVMMRNQLKANYSWDEVGIWQGVSSISDAYLQFITASFSVYL
+ LPTLSRLTEKQDITREVVKALKFVLPAVAAASFTVWLLRDFAIWLLFSAKFTAMRDLF
+ AWQLVGDVLKVGAYVFGYLVIAKASLRFYILAEISQFILLTAFAHWLIPAHGALGAAQ
+ AYMATYIVYFSLCCGVFLLWRRRA"
+ misc_feature complement(3657634..3658881)
+ /locus_tag="SARI_03727"
+ /note="Membrane protein involved in the export of
+ O-antigen and teichoic acid [General function prediction
+ only]; Region: RfbX; COG2244"
+ /db_xref="CDD:225153"
+ misc_feature complement(3657643..3658869)
+ /locus_tag="SARI_03727"
+ /note="Uncharacterized subfamily of the multidrug and
+ toxic compound extrusion (MATE) proteins; Region:
+ MATE_like_10; cd13125"
+ /db_xref="CDD:240530"
+ gene complement(3658883..3660013)
+ /locus_tag="SARI_03728"
+ CDS complement(3658883..3660013)
+ /locus_tag="SARI_03728"
+ /inference="protein motif:HMMPfam:IPR000653"
+ /inference="protein motif:HMMTigr:IPR012749"
+ /inference="similar to AA sequence:REFSEQ:YP_152859.1"
+ /note="catalyzes the formation of dTDP-D-fucosamine from
+ dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common
+ antigen biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="TDP-4-oxo-6-deoxy-D-glucose transaminase"
+ /protein_id="YP_001572670.1"
+ /db_xref="GI:161505558"
+ /db_xref="InterPro:IPR000653"
+ /db_xref="InterPro:IPR012749"
+ /translation="MIPFNAPPVVGTELEYMQSAMSSGKLCGDGGFTRRCQQWLEQHF
+ GSAKVLLTPSCTASLEMAALLLDIQPGDEVIMPSFTFVSTANAFVLRGAKIVFVDIRP
+ DTMNIDETLIEAAITNKTRAIVPVHYAGVACEMDVIMALAEKYNLFVIEDAAQGVMST
+ YKGRALGTIGHIGCFSFHETKNYTAGGEGGATLINDRALIERAEIIREKGTNRSQFFR
+ GQVDKYTWRDIGSSYLMSDLQAAYLWAQLEAADRINQQRLSLWQTYYDALTPLARAGC
+ IKLPSIPENCGHNAHMFYIKLRDIADRSALIHFLKEAEIMAVFHYIPLHDCPAGDKFG
+ KFIGDDIYTTKESERLLRLPLFYNLAPVDQRTVIATLLNYFS"
+ misc_feature complement(3658886..3660013)
+ /locus_tag="SARI_03728"
+ /note="Predicted pyridoxal phosphate-dependent enzyme
+ apparently involved in regulation of cell wall biogenesis
+ [Cell envelope biogenesis, outer membrane]; Region: WecE;
+ COG0399"
+ /db_xref="CDD:223476"
+ misc_feature complement(3658901..3659977)
+ /locus_tag="SARI_03728"
+ /note="3-amino-5-hydroxybenzoic acid synthase family
+ (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate
+ (PLP)-dependent aspartate aminotransferase superfamily
+ (fold I). The members of this CD are involved in various
+ biosynthetic pathways for secondary...; Region: AHBA_syn;
+ cd00616"
+ /db_xref="CDD:99740"
+ misc_feature complement(order(3659054..3659056,3659471..3659476,
+ 3659486..3659488,3659549..3659551,3659558..3659560,
+ 3659846..3659851))
+ /locus_tag="SARI_03728"
+ /note="inhibitor-cofactor binding pocket; inhibition site"
+ /db_xref="CDD:99740"
+ misc_feature complement(order(3659471..3659473,3659486..3659488,
+ 3659549..3659551,3659558..3659560,3659774..3659776,
+ 3659846..3659851))
+ /locus_tag="SARI_03728"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:99740"
+ misc_feature complement(3659471..3659473)
+ /locus_tag="SARI_03728"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:99740"
+ gene complement(3660018..3660641)
+ /locus_tag="SARI_03729"
+ CDS complement(3660018..3660641)
+ /locus_tag="SARI_03729"
+ /inference="protein motif:HMMPfam:IPR000182"
+ /inference="protein motif:HMMTigr:IPR012752"
+ /inference="similar to AA sequence:REFSEQ:YP_218816.1"
+ /note="'KEGG: eci:UTI89_C4346 1.9e-80 rffC, rff, wecD,
+ yifH; TDP-fucosamine acetyltransferase K00680;
+ COG: COG0454 Histone acetyltransferase HPA2 and related
+ acetyltransferases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="TDP-fucosamine acetyltransferase"
+ /protein_id="YP_001572671.1"
+ /db_xref="GI:161505559"
+ /db_xref="InterPro:IPR000182"
+ /db_xref="InterPro:IPR012752"
+ /translation="MNSAIVRIDASAPELTPEALQAWERVQVKVPAENTAWLSALQPL
+ GFSLVEGEVDFALPVKGHSYQHGAEIAHLTDIPALRQLAGEAFALSRFRAPWYAPDAS
+ ARFYAQWIENAVRGTFDHQCLVLRTQTGAIRGYVSLRELNDTDARIGLLAGRGAGAEL
+ MQAAICWAQRRGKATLRVATQLGNTAALKRYIQSGANIESTAYWLYR"
+ misc_feature complement(3660021..3660584)
+ /locus_tag="SARI_03729"
+ /note="TDP-fucosamine acetyltransferase; Provisional;
+ Region: PRK10975"
+ /db_xref="CDD:182877"
+ gene complement(3660673..3661554)
+ /locus_tag="SARI_03730"
+ CDS complement(3660673..3661554)
+ /locus_tag="SARI_03730"
+ /inference="protein motif:HMMPfam:IPR005835"
+ /inference="protein motif:HMMTigr:IPR005907"
+ /inference="similar to AA sequence:INSD:CAD09393.1"
+ /note="'KEGG: sty:STY3632 7.1e-154 rffH;
+ glucose-1-phosphate thymidylyltransferase K00973;
+ COG: COG1209 dTDP-glucose pyrophosphorylase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572672.1"
+ /db_xref="GI:161505560"
+ /db_xref="InterPro:IPR005835"
+ /db_xref="InterPro:IPR005907"
+ /translation="MKGIILAGGSGTRLHPITRGVSKQLLPVYDKPMIYYPLSVLMLA
+ GIREILIITTPEDKRDFQRLLGDGSALGIDLHYAEQPSPDGLAQAFIIGEAFLNGEPS
+ CLVLGDNIFFGQGFSPKLRQVAARTEGATIFGYQVMDPERFGVVEFDDDFRAISLEEK
+ PKQPKSNWAVTGLYFYDSKVVEYAKRVKPSGRGELEITSINQMYLEEGKLTVELLGRG
+ FAWLDTGTHDSLIEASTFVQTVEKRQGFKIACLEEIAWRNGWLDDDGLKRAVNQLEKT
+ GYGQYLLELLRARPRQY"
+ misc_feature complement(3660835..3661554)
+ /locus_tag="SARI_03730"
+ /note="G1P_TT_short is the short form of
+ glucose-1-phosphate thymidylyltransferase; Region:
+ G1P_TT_short; cd02538"
+ /db_xref="CDD:133019"
+ misc_feature complement(3660694..3661551)
+ /locus_tag="SARI_03730"
+ /note="glucose-1-phosphate thymidylyltransferase, short
+ form; Region: rmlA; TIGR01207"
+ /db_xref="CDD:130274"
+ misc_feature complement(order(3660961..3660963,3661045..3661047,
+ 3661075..3661080,3661123..3661125,3661231..3661233,
+ 3661297..3661308,3661315..3661317,3661528..3661533,
+ 3661537..3661539))
+ /locus_tag="SARI_03730"
+ /note="substrate binding site; other site"
+ /db_xref="CDD:133019"
+ misc_feature complement(order(3660835..3660840,3660847..3660855,
+ 3660862..3660864,3660871..3660876,3660886..3660894,
+ 3661126..3661131,3661141..3661152,3661216..3661221,
+ 3661375..3661377,3661450..3661452,3661459..3661470,
+ 3661474..3661482,3661492..3661497,3661504..3661512,
+ 3661519..3661521))
+ /locus_tag="SARI_03730"
+ /note="tetramer interface; other site"
+ /db_xref="CDD:133019"
+ gene complement(3661587..3662654)
+ /locus_tag="SARI_03731"
+ CDS complement(3661587..3662654)
+ /locus_tag="SARI_03731"
+ /inference="protein motif:HMMPfam:IPR001509"
+ /inference="protein motif:HMMTigr:IPR005888"
+ /inference="similar to AA sequence:REFSEQ:NP_807039.1"
+ /note="'KEGG: stm:STM3922 3.6e-191 rffG; dTDP-glucose
+ 4,6-dehydratase K01710;
+ COG: COG1088 dTDP-D-glucose 4,6-dehydratase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="dTDP-glucose 4,6-dehydratase"
+ /protein_id="YP_001572673.1"
+ /db_xref="GI:161505561"
+ /db_xref="InterPro:IPR001509"
+ /db_xref="InterPro:IPR005888"
+ /translation="MKRILVTGGAGFIGSAVVRHIIHETADAVVVVDKLTYAGNLMSL
+ APVAQSDRFAFEKVDICDRASLERVFQQYQPDSVMHLAAESHVDRSIDGPAAFIETNI
+ VGTYTLLEAARAYWSALDADAKAAFRFHHISTDEVYGDLHTADDFFTEATPYAPSSPY
+ SASKASSDHLVRAWLRTYGLPTLVTNCSNNYGPYHFPEKLIPLIILNALAGKALPVYG
+ NGQQIRDWLYVEDHARALYHVVTNGAVGETYNIGGHNERKNLDVVRTICALLEELAPQ
+ KPQGVANYHDLITFVDDRPGHDLRYAIDASKIARELGWTPQETFESGMRKTVQWYLAN
+ EAWWKPVQDGSYQGERLGLKR"
+ misc_feature complement(3661590..3662654)
+ /locus_tag="SARI_03731"
+ /note="dTDP-glucose 4,6-dehydratase; Provisional; Region:
+ PRK10217"
+ /db_xref="CDD:182313"
+ misc_feature complement(3661650..3662651)
+ /locus_tag="SARI_03731"
+ /note="dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs;
+ Region: dTDP_GD_SDR_e; cd05246"
+ /db_xref="CDD:187557"
+ misc_feature complement(order(3662085..3662096,3662163..3662165,
+ 3662175..3662177,3662253..3662261,3662355..3662357,
+ 3662400..3662402,3662406..3662414,3662475..3662483,
+ 3662538..3662543,3662547..3662558,3662616..3662627,
+ 3662631..3662633))
+ /locus_tag="SARI_03731"
+ /note="NAD binding site [chemical binding]; other site"
+ /db_xref="CDD:187557"
+ misc_feature complement(order(3661752..3661754,3661764..3661766,
+ 3661773..3661775,3661878..3661880,3661983..3661985,
+ 3661989..3661991,3662004..3662012,3662043..3662048,
+ 3662055..3662063,3662088..3662096,3662175..3662177,
+ 3662247..3662255,3662394..3662402))
+ /locus_tag="SARI_03731"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:187557"
+ misc_feature complement(order(3661761..3661763,3662121..3662129,
+ 3662133..3662138,3662145..3662150,3662157..3662162,
+ 3662169..3662171,3662178..3662189,3662193..3662198,
+ 3662202..3662204,3662235..3662237,3662316..3662318,
+ 3662325..3662327,3662337..3662339,3662346..3662351,
+ 3662361..3662363,3662370..3662375,3662382..3662384,
+ 3662388..3662390))
+ /locus_tag="SARI_03731"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:187557"
+ misc_feature complement(order(3662163..3662165,3662175..3662177,
+ 3662253..3662255,3662352..3662354))
+ /locus_tag="SARI_03731"
+ /note="active site"
+ /db_xref="CDD:187557"
+ gene complement(3662654..3663916)
+ /gene="wecC"
+ /locus_tag="SARI_03732"
+ CDS complement(3662654..3663916)
+ /gene="wecC"
+ /locus_tag="SARI_03732"
+ /inference="protein motif:HMMPanther:IPR001732"
+ /inference="protein motif:HMMPfam:IPR001732"
+ /inference="protein motif:superfamily:IPR008927"
+ /inference="similar to AA sequence:SwissProt:Q8Z389"
+ /note="catalyzes the oxidation of
+ UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic
+ acid"
+ /codon_start=1
+ /transl_table=11
+ /product="UDP-N-acetyl-D-mannosamine dehydrogenase"
+ /protein_id="YP_001572674.1"
+ /db_xref="GI:161505562"
+ /db_xref="InterPro:IPR001732"
+ /db_xref="InterPro:IPR008927"
+ /translation="MSFTTISVIGLGYIGLPTAAAFASRQKQVIGVDINQHAVDTINR
+ GEIHIVEPALGNVVRTAVDGGFLRATTTPVEADAYLIAVPTPFKGEHDPDMAYVKAAA
+ KSIAPVLKKGALVILESTSPVGATEQMAGWLAGMRPDLTFPQQAGEQADVNIAYCPER
+ VLPGQVMVELIKNDRVIGGMTPVCSARASALYKIFLEGECVVTNSRTAEMCKLTENSF
+ RDVNIAFANELSLICAEQGINVWELIRLANRHPRVNILQPGPGVGGHCIAVDPWFIVA
+ QNPQQARLIRTAREVNDGKPHWVVDQVKAAVADCLAATDKRASEVKIACFGLAFKPNI
+ DDLRESPAMGIAQSIARWHSGETLVVEPNIRQLPKKLDGLCTLAKLDAALAAADVLVM
+ LVDHDEFKAIPGDAVHQRYVVDTKGVWR"
+ misc_feature complement(3662672..3663916)
+ /gene="wecC"
+ /locus_tag="SARI_03732"
+ /note="UDP-N-acetyl-D-mannosamine dehydrogenase;
+ Provisional; Region: wecC; PRK11064"
+ /db_xref="CDD:182940"
+ misc_feature complement(3663026..3663301)
+ /gene="wecC"
+ /locus_tag="SARI_03732"
+ /note="UDP-glucose/GDP-mannose dehydrogenase family,
+ central domain; Region: UDPG_MGDP_dh; pfam00984"
+ /db_xref="CDD:201536"
+ misc_feature complement(3662660..3662947)
+ /gene="wecC"
+ /locus_tag="SARI_03732"
+ /note="UDP binding domain; Region: UDPG_MGDP_dh_C;
+ smart00984"
+ /db_xref="CDD:214954"
+ gene complement(3663913..3664998)
+ /locus_tag="SARI_03733"
+ CDS complement(3663913..3664998)
+ /locus_tag="SARI_03733"
+ /inference="protein motif:HMMPfam:IPR003331"
+ /inference="protein motif:HMMTigr:IPR003331"
+ /inference="similar to AA sequence:REFSEQ:NP_462810.1"
+ /note="'KEGG: stm:STM3920 4.1e-190 wecB; UDP-N-acetyl
+ glucosamine -2-epimerase K01791;
+ COG: COG0381 UDP-N-acetylglucosamine 2-epimerase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572675.1"
+ /db_xref="GI:161505563"
+ /db_xref="InterPro:IPR003331"
+ /translation="MAPLVHALEKDPHFEAKVCVTAQHREMLDQVLTLFSIVPDYDLN
+ IMQPGQGLTEITCRILEGLKPILADFKPDVVLVHGDTTTTIATSLAAFYQRIPVGHVE
+ AGLRTGDLYSPWPEEANRTLTGHLAMYHFAPTEKSRQNLLRENIPDERIFVTGNTVID
+ ALIWVRDRVLASDTLQAELAEQYPFLNANKKMILVTGHRRESFGQGFEHICHALAEIA
+ AANQDVQIVYPVHLNPNVSEPVNRILGHVENVLLIEPQDYLPFVWLMNHAWLILTDSG
+ GIQEEAPSLGKPVLVMRETTERPEAITAGTVRLVGTDSRRIVAEVMRLLHDENEYQTM
+ SRAHNPYGNGQSCKRILQALKSYRVSL"
+ misc_feature complement(3663925..3664998)
+ /locus_tag="SARI_03733"
+ /note="UDP-N-acetylglucosamine 2-epimerase; Region: wecB;
+ TIGR00236"
+ /db_xref="CDD:188036"
+ misc_feature complement(3663934..3664998)
+ /locus_tag="SARI_03733"
+ /note="Bacterial members of the UDP-N-Acetylglucosamine
+ (GlcNAc) 2-Epimerase family are known to catalyze the
+ reversible interconversion of UDP-GlcNAc and
+ UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to
+ produce an activated form of ManNAc residues; Region:
+ GT1_UDP-GlcNAc_2-Epimerase; cd03786"
+ /db_xref="CDD:99962"
+ misc_feature complement(order(3664570..3664572,3664645..3664647,
+ 3664657..3664659,3664708..3664710,3664714..3664716,
+ 3664720..3664725,3664807..3664809,3664828..3664833,
+ 3664837..3664839))
+ /locus_tag="SARI_03733"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99962"
+ misc_feature complement(order(3664156..3664158,3664168..3664170,
+ 3664216..3664218,3664225..3664227,3664231..3664233))
+ /locus_tag="SARI_03733"
+ /note="active site"
+ /db_xref="CDD:99962"
+ gene complement(3665099..3666145)
+ /locus_tag="SARI_03734"
+ CDS complement(3665099..3666145)
+ /locus_tag="SARI_03734"
+ /inference="protein motif:HMMPfam:IPR003856"
+ /inference="similar to AA sequence:INSD:AAV79541.1"
+ /note="Enterobacterial Common Antigen (ECA) polysaccharide
+ chain length modulation protein"
+ /codon_start=1
+ /transl_table=11
+ /product="lipopolysaccharide biosynthesis protein WzzE"
+ /protein_id="YP_001572676.1"
+ /db_xref="GI:161505564"
+ /db_xref="InterPro:IPR003856"
+ /translation="MTQPLPGARAVSAENELDIRGLFRTLWAGKFWIIGIGLLFALIA
+ LAYTFFARQEWSATAITDRPTVNMLGGYYSQQQFLRNLDIKTDPASSDKPSVMDEAYK
+ EFIMQLASWDTRRDFWLQTDYYKQRMVGNSKADAAMLDELINNIQFTPGDFTRAINDN
+ VKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTVQMKAQVKRQEEVAKA
+ IYSRRVNSIEQALKIAEQHNISRSATDVPADELPDSELFLLGRPMLQARLENLQAVGP
+ AFDLDYFQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGA
+ LIGAGVALTRRRTI"
+ misc_feature complement(3665102..3666124)
+ /locus_tag="SARI_03734"
+ /note="lipopolysaccharide biosynthesis protein WzzE;
+ Provisional; Region: PRK11638"
+ /db_xref="CDD:236943"
+ misc_feature complement(<3665897..3666103)
+ /locus_tag="SARI_03734"
+ /note="Chain length determinant protein; Region: Wzz;
+ pfam02706"
+ /db_xref="CDD:217194"
+ gene complement(3666157..3667260)
+ /locus_tag="SARI_03735"
+ CDS complement(3666157..3667260)
+ /locus_tag="SARI_03735"
+ /inference="protein motif:HMMPfam:IPR000715"
+ /inference="protein motif:HMMTigr:IPR012750"
+ /inference="similar to AA sequence:INSD:AAX67729.1"
+ /note="'KEGG: sec:SC3823 3.5e-193 wecA;
+ undecaprenyl-phosphate alpha-N-acetylglucosaminyl K02851;
+ COG: COG0472 UDP-N-acetylmuramyl pentapeptide
+ phosphotransferase/UDP-N-acetylglucosamine-1-phosphate
+ transferase;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572677.1"
+ /db_xref="GI:161505565"
+ /db_xref="InterPro:IPR000715"
+ /db_xref="InterPro:IPR012750"
+ /translation="MNLLTVSTDLISIFLFTTLFLFFARKVAKKIGLVDKPNFRKRHQ
+ GLIPLVGGISVYAGICFTFGIVDHYIPHASLYLSCAGVLVLIGALDDRFDISVKIRAT
+ IQAAIGIIMMVFGKLYLSSLGYIFGSWEMVLGPFGYFLTLFAVWAAINAFNMVDGIDG
+ LLGGLSSVSFAAMGLILWFDGQTSLAIWCFAMIAAILPYIMLNLGILGRRYKVFMGDA
+ GSTLIGFTVIWILLETTQGKTHPISPVTALWIIAIPLMDMVAIMYRRLRKGMSPFSPD
+ RQHIHHLIMRAGFTSRQAFVLITLAAAILAGIGVTAEYSHFVPEWVMLVLFLLAFFLY
+ GYCIKRAWKVARFIKRVKRRLRRHRENRPNLTK"
+ misc_feature complement(3666226..3667260)
+ /locus_tag="SARI_03735"
+ /note="undecaprenyl-phosphate alpha-N-acetylglucosaminyl
+ 1-phosphate transferase; Provisional; Region: PRK15119"
+ /db_xref="CDD:237913"
+ misc_feature complement(3666394..3667143)
+ /locus_tag="SARI_03735"
+ /note="This subfamily contains Escherichia coli WecA,
+ Bacillus subtilis TagO and related proteins. WecA is an
+ UDP-N-acetylglucosamine (GlcNAc):undecaprenyl-phosphate
+ (Und-P) GlcNAc-1-phosphate transferase that catalyzes the
+ formation of a phosphodiester bond...; Region:
+ GT_WecA_like; cd06853"
+ /db_xref="CDD:133463"
+ misc_feature complement(3666988..3666993)
+ /locus_tag="SARI_03735"
+ /note="Mg++ binding site [ion binding]; other site"
+ /db_xref="CDD:133463"
+ misc_feature complement(3666610..3666621)
+ /locus_tag="SARI_03735"
+ /note="putative catalytic motif [active]"
+ /db_xref="CDD:133463"
+ misc_feature complement(order(3666415..3666426,3666466..3666468))
+ /locus_tag="SARI_03735"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:133463"
+ gene complement(3667500..3668759)
+ /gene="rho"
+ /locus_tag="SARI_03736"
+ CDS complement(3667500..3668759)
+ /gene="rho"
+ /locus_tag="SARI_03736"
+ /inference="protein motif:HMMPfam:IPR000194"
+ /inference="protein motif:HMMPfam:IPR011112"
+ /inference="protein motif:HMMPfam:IPR011113"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMSmart:IPR011129"
+ /inference="protein motif:HMMTigr:IPR004665"
+ /inference="protein motif:superfamily:IPR008994"
+ /inference="similar to AA sequence:SwissProt:P0A296"
+ /note="An RNA-DNA helicase that actively releases nascent
+ mRNAs from paused transcription complexes"
+ /codon_start=1
+ /transl_table=11
+ /product="transcription termination factor Rho"
+ /protein_id="YP_001572678.1"
+ /db_xref="GI:161505566"
+ /db_xref="InterPro:IPR000194"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR004665"
+ /db_xref="InterPro:IPR008994"
+ /db_xref="InterPro:IPR011112"
+ /db_xref="InterPro:IPR011113"
+ /db_xref="InterPro:IPR011129"
+ /translation="MNLTELKNTPVSELITLGESMGLENLARMRKQDIIFAILKQHAK
+ SGEDIFGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIR
+ PPKEGERYFALLKVNEVNYDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTAR
+ VLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTE
+ MQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNT
+ VVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEE
+ FKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGE
+ IDAMEFLINKLAMTKTNDDFFEMMKRS"
+ misc_feature complement(3667506..3668759)
+ /gene="rho"
+ /locus_tag="SARI_03736"
+ /note="transcription termination factor Rho; Provisional;
+ Region: rho; PRK09376"
+ /db_xref="CDD:236490"
+ misc_feature complement(3668619..3668747)
+ /gene="rho"
+ /locus_tag="SARI_03736"
+ /note="Rho termination factor, N-terminal domain; Region:
+ Rho_N; smart00959"
+ /db_xref="CDD:198027"
+ misc_feature complement(3668406..3668609)
+ /gene="rho"
+ /locus_tag="SARI_03736"
+ /note="Rho_CSD: Rho protein cold-shock domain (CSD). Rho
+ protein is a transcription termination factor in most
+ bacteria. In bacteria, there are two distinct mechanisms
+ for mRNA transcription termination. In intrinsic
+ termination, RNA polymerase and nascent mRNA...; Region:
+ Rho_CSD; cd04459"
+ /db_xref="CDD:239906"
+ misc_feature complement(order(3668430..3668438,3668445..3668447,
+ 3668520..3668522,3668526..3668528,3668562..3668564,
+ 3668568..3668570,3668574..3668576,3668586..3668588,
+ 3668592..3668594))
+ /gene="rho"
+ /locus_tag="SARI_03736"
+ /note="RNA binding site [nucleotide binding]; other site"
+ /db_xref="CDD:239906"
+ misc_feature complement(3667548..3668294)
+ /gene="rho"
+ /locus_tag="SARI_03736"
+ /note="Transcription termination factor rho is a bacterial
+ ATP-dependent RNA/DNA helicase. It is a homohexamer. Each
+ monomer consists of an N-terminal domain of the OB fold,
+ which is responsible for binding to cysteine rich
+ nucleotides. This alignment is of the...; Region:
+ rho_factor; cd01128"
+ /db_xref="CDD:238548"
+ misc_feature complement(order(3667605..3667607,3667617..3667619,
+ 3667659..3667664,3667734..3667736,3667740..3667754,
+ 3667758..3667763,3667836..3667838,3667845..3667847,
+ 3667854..3667856,3667863..3667868,3667875..3667877,
+ 3667908..3667910,3668241..3668243))
+ /gene="rho"
+ /locus_tag="SARI_03736"
+ /note="multimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238548"
+ misc_feature complement(3668205..3668228)
+ /gene="rho"
+ /locus_tag="SARI_03736"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:238548"
+ misc_feature complement(order(3667695..3667697,3668202..3668213,
+ 3668217..3668219))
+ /gene="rho"
+ /locus_tag="SARI_03736"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238548"
+ misc_feature complement(3667965..3667979)
+ /gene="rho"
+ /locus_tag="SARI_03736"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:238548"
+ gene complement(3669178..3669549)
+ /gene="trxA"
+ /locus_tag="SARI_03737"
+ CDS complement(3669178..3669549)
+ /gene="trxA"
+ /locus_tag="SARI_03737"
+ /inference="protein motif:Gene3D:IPR012335"
+ /inference="protein motif:HMMPfam:IPR013766"
+ /inference="protein motif:HMMTigr:IPR005746"
+ /inference="protein motif:ScanRegExp:IPR006662"
+ /inference="protein motif:superfamily:IPR012336"
+ /inference="similar to AA sequence:REFSEQ:YP_218808.1"
+ /note="'KEGG: eci:UTI89_C4335 2.3e-61 trxA; THIoredoxin 1
+ K03671;
+ COG: COG0526 Thiol-disulfide isomerase and THIoredoxins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="thioredoxin"
+ /protein_id="YP_001572679.1"
+ /db_xref="GI:161505567"
+ /db_xref="InterPro:IPR005746"
+ /db_xref="InterPro:IPR006662"
+ /db_xref="InterPro:IPR012335"
+ /db_xref="InterPro:IPR012336"
+ /db_xref="InterPro:IPR013766"
+ /translation="MLHQHARLIPVELYMSDKIIHLTDDSFDTDVLKADGAILVDFWA
+ EWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVA
+ ATKVGALSKGQLKEFLDANLA"
+ misc_feature complement(3669193..3669477)
+ /gene="trxA"
+ /locus_tag="SARI_03737"
+ /note="TRX family; composed of two groups: Group I, which
+ includes proteins that exclusively encode a TRX domain;
+ and Group II, which are composed of fusion proteins of TRX
+ and additional domains. Group I TRX is a small ancient
+ protein that alter the redox...; Region: TRX_family;
+ cd02947"
+ /db_xref="CDD:239245"
+ misc_feature complement(3669247..3669438)
+ /gene="trxA"
+ /locus_tag="SARI_03737"
+ /note="Thioredoxin-like; Region: Thioredoxin_8; pfam13905"
+ /db_xref="CDD:222448"
+ misc_feature complement(order(3669400..3669402,3669409..3669411))
+ /gene="trxA"
+ /locus_tag="SARI_03737"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:239245"
+ gene 3669651..3670916
+ /locus_tag="SARI_03738"
+ CDS 3669651..3670916
+ /locus_tag="SARI_03738"
+ /inference="protein motif:HMMPfam:IPR001650"
+ /inference="protein motif:HMMPfam:IPR011545"
+ /inference="protein motif:HMMSmart:IPR001650"
+ /inference="protein motif:HMMSmart:IPR014001"
+ /inference="protein motif:ScanRegExp:IPR000629"
+ /inference="similar to AA sequence:INSD:CAD09401.1"
+ /note="'enables ATP-dependent unwinding of double stranded
+ RNA as a component of the RNA degradosome, a multi-enzyme
+ complex important in RNA processing and messenger RNA
+ degradation'"
+ /codon_start=1
+ /transl_table=11
+ /product="ATP-dependent RNA helicase RhlB"
+ /protein_id="YP_001572680.1"
+ /db_xref="GI:161505568"
+ /db_xref="InterPro:IPR000629"
+ /db_xref="InterPro:IPR001650"
+ /db_xref="InterPro:IPR011545"
+ /db_xref="InterPro:IPR014001"
+ /translation="MSKTHLTEQKFSDFALHPQVVEALEKKGFYNCTPIQALALPLTL
+ AGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHA
+ DAEPLAQVTGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQ
+ VVVLDEADRMYDLGFIKDIRWLFRRMPPAAQRLNMLFSATLSYRVRELAFEQMNNAEY
+ VEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHL
+ AADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLP
+ DDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIESYIGHSIPVSKYNPEALMTD
+ LPKPLRLTRSRPGNGPRRAGAPRNRRRSG"
+ misc_feature 3669654..3670850
+ /locus_tag="SARI_03738"
+ /note="ATP-dependent RNA helicase RhlB; Provisional;
+ Region: PRK04837"
+ /db_xref="CDD:235314"
+ misc_feature 3669681..3670310
+ /locus_tag="SARI_03738"
+ /note="DEAD-box helicases. A diverse family of proteins
+ involved in ATP-dependent RNA unwinding, needed in a
+ variety of cellular processes including splicing, ribosome
+ biogenesis and RNA degradation. The name derives from the
+ sequence of the Walker B motif; Region: DEADc; cd00268"
+ /db_xref="CDD:238167"
+ misc_feature 3669816..3669830
+ /locus_tag="SARI_03738"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238167"
+ misc_feature 3670143..3670154
+ /locus_tag="SARI_03738"
+ /note="Mg++ binding site [ion binding]; other site"
+ /db_xref="CDD:238167"
+ misc_feature 3670242..3670250
+ /locus_tag="SARI_03738"
+ /note="motif III; other site"
+ /db_xref="CDD:238167"
+ misc_feature 3670347..3670727
+ /locus_tag="SARI_03738"
+ /note="Helicase superfamily c-terminal domain; associated
+ with DEXDc-, DEAD-, and DEAH-box proteins, yeast
+ initiation factor 4A, Ski2p, and Hepatitis C virus NS3
+ helicases; this domain is found in a wide variety of
+ helicases and helicase related proteins; may...; Region:
+ HELICc; cd00079"
+ /db_xref="CDD:238034"
+ misc_feature order(3670440..3670451,3670509..3670514,3670587..3670595)
+ /locus_tag="SARI_03738"
+ /note="nucleotide binding region [chemical binding]; other
+ site"
+ /db_xref="CDD:238034"
+ misc_feature order(3670611..3670613,3670674..3670676,3670686..3670688,
+ 3670695..3670697)
+ /locus_tag="SARI_03738"
+ /note="ATP-binding site [chemical binding]; other site"
+ /db_xref="CDD:238034"
+ gene 3670928..3672412
+ /locus_tag="SARI_03739"
+ CDS 3670928..3672412
+ /locus_tag="SARI_03739"
+ /inference="protein motif:HMMPfam:IPR003695"
+ /inference="similar to AA sequence:INSD:CAD09402.1"
+ /note="'catalyzes the conversion of guanosine
+ 5'-triphosphate,3'-diphosphate (pppGpp) to guanosine
+ 5'-diphosphate,3'-diphosphate (ppGpp); pppGpp and ppGpp
+ control the stringent response during amino acid
+ starvation'"
+ /codon_start=1
+ /transl_table=11
+ /product="guanosine pentaphosphate phosphohydrolase"
+ /protein_id="YP_001572681.1"
+ /db_xref="GI:161505569"
+ /db_xref="InterPro:IPR003695"
+ /translation="MLNSTSLYAAIDLGSNSFHMLVVREVAGSIQTLTRIKRKVRLAA
+ GLSSDNQLSAEAMERGWQCLRLFAERLQDIPQPQIRVVATATLRLAVNAGEFIAKAQT
+ ILGCPVQVISGEEEARLIYQGVAHTTGGAEQRLVVDIGGASTELVTGTGAQTTSLFSL
+ SMGCVTWLEHYFSDRNLAQENFDDAEKAARDVLRPVADKLRFHGWKVCVGASGTVQAL
+ QEIMMAQGMDERITLAKLQQLKQRAIQCGRLEELEIEGLTLERALVFPSGLAILIAIF
+ TELNIQFMTLAGGALREGLVYGMLHLTVDQDICSRTLRNIQRRFIIDTDQANRVAKLA
+ GNFLKQVENAWHIEPISRELLLSACQLHEIGLSVDFKQAPYHAAYLVRHLDLPGYTPA
+ QKKLLATLLLNQTNPVDLSSLHQQNAVPPRVAEQLCRLLRLAILFAGRRRDDLVPEIT
+ LQAQNENLTLTLPDGWLAHHPLGKELIDQESQWQSYVHWPLDIR"
+ misc_feature 3670928..3672406
+ /locus_tag="SARI_03739"
+ /note="guanosine pentaphosphate phosphohydrolase;
+ Provisional; Region: PRK11031"
+ /db_xref="CDD:236826"
+ misc_feature 3670988..3671830
+ /locus_tag="SARI_03739"
+ /note="Ppx/GppA phosphatase family; Region: Ppx-GppA;
+ pfam02541"
+ /db_xref="CDD:202276"
+ gene complement(3672428..3674452)
+ /locus_tag="SARI_03740"
+ CDS complement(3672428..3674452)
+ /locus_tag="SARI_03740"
+ /inference="protein motif:HMMPanther:IPR000212"
+ /inference="protein motif:HMMPfam:IPR000212"
+ /inference="protein motif:HMMTigr:IPR005752"
+ /note="single-stranded DNA-dependent ATPase; initiates
+ unwinding at a nick in the DNA; involved in DNA
+ replication"
+ /codon_start=1
+ /transl_table=11
+ /product="ATP-dependent DNA helicase Rep"
+ /protein_id="YP_001572682.1"
+ /db_xref="GI:161505570"
+ /db_xref="InterPro:IPR000212"
+ /db_xref="InterPro:IPR005752"
+ /translation="MRLNPGQQHAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRGCG
+ YQARHIAAVTFTNKAAREMKERVGQTLGRKEARGLMISTFHTLGLDIIKREYAALGMK
+ SNFSLFDDTDQVALLKELTEGLIDDDKVVLQQLISTISNWKNDLKTPAQAAAGAKGER
+ DRIFAHCYGLYDAHMKACNVLDFDDLILLPTLLLQRNDEVRERWQNKIRYLLVDEYQD
+ TNTSQYELVKLLVGQRARFTVVGDDDQSIYSWRGARPQNLVLLSQDFPALQVIKLEQN
+ YRSSGRILKAANILIANNPHVFEKRLFSELGYGAELKVLSANNEEHEAERVTGELIAH
+ HFVNKTQYKDYAILYRGNHQSRVFEKFLMQNRIPYKISGGTSFFSRPEIKDLLAYLRV
+ LTNPDDDSAFLRIVNTPKREIGSATLQKLGEWAMTRNKSLFTASFDMGLSQTLTGRGY
+ DSLTRFTHWLGEIQRLAEREPIAAVRDLIHGIDYESWLYETSPSPKAAEMRMKNVNQL
+ FSWMTEMLEGNELNEPMTLTQVVTRFTLRDMMERGESEEELDQVQLMTLHASKGLEFP
+ YVYMVGMEEGFLPHQSSIDEDNIEEERRLAYVGITRAQKELTFTLCKERRQYGELVRP
+ EPSRFLLELPQDDLIWEQERKVVSAEERMQKGQSHLANLKAMMAAKRAKS"
+ misc_feature complement(3672437..3674452)
+ /locus_tag="SARI_03740"
+ /note="ATP-dependent DNA helicase Rep; Provisional;
+ Region: PRK10919"
+ /db_xref="CDD:182838"
+ misc_feature complement(3674189..3674401)
+ /locus_tag="SARI_03740"
+ /note="Part of AAA domain; Region: AAA_19; pfam13245"
+ /db_xref="CDD:222005"
+ misc_feature complement(3672623..>3672790)
+ /locus_tag="SARI_03740"
+ /note="Family description; Region: UvrD_C_2; pfam13538"
+ /db_xref="CDD:222209"
+ gene complement(3674552..3675280)
+ /locus_tag="SARI_03741"
+ CDS complement(3674552..3675280)
+ /locus_tag="SARI_03741"
+ /inference="protein motif:HMMPfam:IPR006419"
+ /inference="protein motif:HMMTigr:IPR006419"
+ /inference="similar to AA sequence:REFSEQ:YP_152847.1"
+ /note="'COG: COG3201 Nicotinamide mononucleotide
+ transporter;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572683.1"
+ /db_xref="GI:161505571"
+ /db_xref="InterPro:IPR006419"
+ /translation="MDFFSINNVMVNIPLGEGGYALSWIEAIGTIFGLLCIWCASREK
+ IINYLFGLINVTLFAAIFFQIQLYASLLLQVFFFAANIYGWYAWSRQNDAQEAALKVR
+ WLSRQQTWVLGGVCIIAILLMTWFIDPVFAMLTRVMLALLQTVGIQVAMPELQPDAFP
+ FWDSTMLVLSIAAMVLMTRKYVENWLLWVIIDVISVVIYAVQGVYAMSLEYVLLTAIA
+ LMGSYSWIKSAQRNGYTPLVARAC"
+ misc_feature complement(3674570..3675280)
+ /locus_tag="SARI_03741"
+ /note="nicotinamide riboside transporter PnuC;
+ Provisional; Region: PRK15397"
+ /db_xref="CDD:185295"
+ gene complement(3675280..3676023)
+ /locus_tag="SARI_03742"
+ CDS complement(3675280..3676023)
+ /locus_tag="SARI_03742"
+ /inference="protein motif:HMMPfam:IPR000845"
+ /inference="protein motif:ScanRegExp:IPR000845"
+ /inference="similar to AA sequence:INSD:CAD09405.1"
+ /note="'KEGG: sty:STY3644 2.1e-124 probable uridine
+ phosphorylase K00757;
+ COG: COG2820 Uridine phosphorylase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572684.1"
+ /db_xref="GI:161505572"
+ /db_xref="InterPro:IPR000845"
+ /translation="MQPHIRLNTSLTRARYALLPGDPGRVDRIARFLDNAEVIGQNRE
+ FRAARGWYQGVEIVVLSTGIGGPSTAIAIEELRQIGVNTLIRIGSCGALQDSLALGDV
+ IIAHGAVADDGASKTYAPASYPACADPYLTATLIQQAKQMNISAVCGLVRSHDSFYTD
+ REAELDAEWSARGVLGADMETAALMVVGALRGLRTASLLNVVVAHNGCLESSINSYVQ
+ QETLCQQGEERQISLALQAIYFDSLQGEQ"
+ misc_feature complement(3675313..3676014)
+ /locus_tag="SARI_03742"
+ /note="uridine phosphorylase; Provisional; Region:
+ PRK11178"
+ /db_xref="CDD:183018"
+ misc_feature complement(3675310..3675981)
+ /locus_tag="SARI_03742"
+ /note="Phosphorylase superfamily; Region: PNP_UDP_1;
+ cl00303"
+ /db_xref="CDD:241766"
+ gene complement(3676052..3676753)
+ /locus_tag="SARI_03743"
+ CDS complement(3676052..3676753)
+ /locus_tag="SARI_03743"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000595"
+ /inference="protein motif:HMMSmart:IPR000595"
+ /inference="protein motif:superfamily:IPR000595"
+ /inference="similar to AA sequence:INSD:CAD09406.1"
+ /note="'KEGG: eci:UTI89_C3860 1.2e-05 crp; CRP-cAMP
+ transcriptional dual regulator K00924;
+ COG: NOG28604 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572685.1"
+ /db_xref="GI:161505573"
+ /db_xref="InterPro:IPR000595"
+ /db_xref="InterPro:IPR011991"
+ /translation="MNIMKNAEFPDDWLLGLRQVIRDPVLYELLKYCPLEIMQCWRFE
+ DISRGALICRQGEICQQFSLIVAGEADVFYEAEDGRRYRQARYGKGDMLGELEIFESR
+ HYICSVVAVGNVQLLSLPQAHFCRWLTLDNYFNQRMLRFFSQQYYQLSKKASSDNLYS
+ LHQRVCQALWLRYQQYESTTILLDKQNLGQEFAATTRSINRILHDLKSLNIIDTDGER
+ IILLAPEKLKQEAEI"
+ misc_feature complement(3676091..3676705)
+ /locus_tag="SARI_03743"
+ /note="DNA-binding transcriptional dual regulator Crp;
+ Provisional; Region: PRK11753"
+ /db_xref="CDD:236969"
+ misc_feature complement(3676337..3676669)
+ /locus_tag="SARI_03743"
+ /note="effector domain of the CAP family of transcription
+ factors; members include CAP (or cAMP receptor protein
+ (CRP)), which binds cAMP, FNR (fumarate and nitrate
+ reduction), which uses an iron-sulfur cluster to sense
+ oxygen) and CooA, a heme containing CO...; Region: CAP_ED;
+ cd00038"
+ /db_xref="CDD:237999"
+ misc_feature complement(order(3676436..3676444,3676469..3676474))
+ /locus_tag="SARI_03743"
+ /note="ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:237999"
+ misc_feature complement(order(3676352..3676360,3676370..3676378))
+ /locus_tag="SARI_03743"
+ /note="flexible hinge region; other site"
+ /db_xref="CDD:237999"
+ misc_feature complement(3676067..3676267)
+ /locus_tag="SARI_03743"
+ /note="Crp-like helix-turn-helix domain; Region:
+ HTH_Crp_2; pfam13545"
+ /db_xref="CDD:222212"
+ gene 3676947..3677228
+ /locus_tag="SARI_03744"
+ CDS 3676947..3677228
+ /locus_tag="SARI_03744"
+ /inference="protein motif:HMMPfam:IPR000297"
+ /inference="protein motif:ScanRegExp:IPR000297"
+ /inference="similar to AA sequence:REFSEQ:YP_001178714.1"
+ /note="'KEGG: spt:SPA3749 1.8e-45 ppiC; peptidyl-prolyl
+ cis-trans isomerase C K03769;
+ COG: COG0760 Parvulin-like peptidyl-prolyl isomerase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572686.1"
+ /db_xref="GI:161505574"
+ /db_xref="InterPro:IPR000297"
+ /translation="MAKTAAALHILVKEEKLALDLLEQIKNGGDFEKLAKKHSICPSG
+ KKGGHLGEFRQGQMVPAFDKVVFSCPVLEPTGPLHTQFGYHIIKVLYRN"
+ misc_feature 3676947..3677225
+ /locus_tag="SARI_03744"
+ /note="peptidyl-prolyl cis-trans isomerase C; Provisional;
+ Region: PRK15441"
+ /db_xref="CDD:185338"
+ misc_feature <3676947..3677222
+ /locus_tag="SARI_03744"
+ /note="Parvulin-like peptidyl-prolyl isomerase
+ [Posttranslational modification, protein turnover,
+ chaperones]; Region: SurA; COG0760"
+ /db_xref="CDD:223831"
+ gene complement(3677283..3678758)
+ /locus_tag="SARI_03745"
+ CDS complement(3677283..3678758)
+ /locus_tag="SARI_03745"
+ /inference="protein motif:HMMPfam:IPR000506"
+ /inference="protein motif:HMMPfam:IPR013116"
+ /inference="protein motif:HMMTigr:IPR013023"
+ /inference="protein motif:superfamily:IPR008927"
+ /inference="similar to AA sequence:INSD:ABE09751.1"
+ /note="'catalyzes the formation of
+ (R)-2,3-dihydroxy-3-methylbutanoate from
+ (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and
+ isoleucine biosynthesis'"
+ /codon_start=1
+ /transl_table=11
+ /product="ketol-acid reductoisomerase"
+ /protein_id="YP_001572687.1"
+ /db_xref="GI:161505575"
+ /db_xref="InterPro:IPR000506"
+ /db_xref="InterPro:IPR008927"
+ /db_xref="InterPro:IPR013023"
+ /db_xref="InterPro:IPR013116"
+ /translation="MANYFNTLNLRQQLAQLGKCRFMGRDEFADGASYLQGKKVVIVG
+ CGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLV
+ INLTPDKQHSDVVRSVQPLMKDGAALGYSHGFNIVEVGEQIRKDITVVMVAPKCPGTE
+ VREEYKRGFGVPTLIAVHPENDPKGEGMAIAKAWAAATGGHRAGVLESSFVAEVKSDL
+ MGEQTILCGMLQAGSLLCFDKLVEEGTDPAYAEKLIQFGWETITEALKQGGITLMMDR
+ LSNPAKLRAYALSEQLKAIMAPLFQKHMDDIISGEFSSGMMADWANDDKKLLTWREET
+ GKTAFETAPQYEGKIGEQEYFDKGVLMIAMVKAGVELAFETMVDSGIIEESAYYESLH
+ ELPLIANTIARKRLYEMNVVISDTAEYGNYLFSYACVPLLKPFMAELQPGDLGKAIAE
+ GSVDNAQLRDVNDAIRSHAIEKVGQKLRGYMTDMKRIAVAG"
+ misc_feature complement(3677295..3678755)
+ /locus_tag="SARI_03745"
+ /note="ketol-acid reductoisomerase; Validated; Region:
+ PRK05225"
+ /db_xref="CDD:235368"
+ misc_feature complement(3678210..3678659)
+ /locus_tag="SARI_03745"
+ /note="Acetohydroxy acid isomeroreductase, catalytic
+ domain; Region: IlvN; pfam07991"
+ /db_xref="CDD:116601"
+ misc_feature complement(3677760..3678131)
+ /locus_tag="SARI_03745"
+ /note="Acetohydroxy acid isomeroreductase, catalytic
+ domain; Region: IlvC; pfam01450"
+ /db_xref="CDD:216510"
+ misc_feature complement(3677304..3677711)
+ /locus_tag="SARI_03745"
+ /note="Acetohydroxy acid isomeroreductase, catalytic
+ domain; Region: IlvC; pfam01450"
+ /db_xref="CDD:216510"
+ gene 3678915..3679805
+ /locus_tag="SARI_03746"
+ CDS 3678915..3679805
+ /locus_tag="SARI_03746"
+ /inference="protein motif:FPrintScan:IPR000847"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="protein motif:HMMPfam:IPR005119"
+ /inference="similar to AA sequence:INSD:AAF33477.1"
+ /note="participates in controlling several genes involved
+ in isoleucine and valine biosynthesis; activates the
+ transcription of the ilvC gene in the presence of
+ acetolactate or acetohydroxybutyrate"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional regulator IlvY"
+ /protein_id="YP_001572688.1"
+ /db_xref="GI:161505576"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR005119"
+ /db_xref="InterPro:IPR011991"
+ /translation="MDLRDLETFLHLAESRHFGRSARAMHVSPSTLSRQIQRLEEDLG
+ QPLFVRDNRTVTLTEAGEELRVFAQQTLLQYQQLRHTLDQQGPSLSGELHIFCSVTAA
+ YSHLPPILDRFRAEHPSVEIKLTTGDAADAMDKVVTGEADLAIAGKPETLPGAVAFSM
+ LENLAVVLIAPALPCPVRNQVSMDKPDWSTVPFIMADQGPVRRRIELWFRRHKISNPS
+ IYATVGGHEAMVSMVALGCGVALIPEVVLENSPEPVRNRVMILERSDEKTPFELGVCA
+ QKKRLHEPLIDAFWNLLPGH"
+ misc_feature 3678921..3679100
+ /locus_tag="SARI_03746"
+ /note="Bacterial regulatory helix-turn-helix protein, lysR
+ family; Region: HTH_1; pfam00126"
+ /db_xref="CDD:215735"
+ misc_feature 3678987..3679802
+ /locus_tag="SARI_03746"
+ /note="DNA-binding transcriptional regulator IlvY;
+ Provisional; Region: PRK11716"
+ /db_xref="CDD:236961"
+ misc_feature 3679188..3679790
+ /locus_tag="SARI_03746"
+ /note="The C-terminal substrate binding of LysR-type
+ transcriptional regulator IlvY, which activates the
+ expression of ilvC gene that encoding acetohydroxy acid
+ isomeroreductase for the biosynthesis of branched amino
+ acids; contains the type 2 periplasmic bindin; Region:
+ PBP2_IlvY; cd08430"
+ /db_xref="CDD:176121"
+ misc_feature order(3679233..3679238,3679242..3679247,3679254..3679256,
+ 3679266..3679268,3679272..3679292,3679572..3679589,
+ 3679605..3679610,3679614..3679619)
+ /locus_tag="SARI_03746"
+ /note="putative dimerization interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:176121"
+ gene complement(3679887..3681434)
+ /locus_tag="SARI_03747"
+ CDS complement(3679887..3681434)
+ /locus_tag="SARI_03747"
+ /inference="protein motif:HMMPfam:IPR001721"
+ /inference="protein motif:HMMPfam:IPR001926"
+ /inference="protein motif:HMMTigr:IPR005787"
+ /inference="protein motif:ScanRegExp:IPR000634"
+ /inference="similar to AA sequence:REFSEQ:YP_218797.1"
+ /note="'threonine deaminase; threonine dehydratase; in
+ Escherichia coli, IlvA is part of the isoleucine
+ biosynthetic pathway'"
+ /codon_start=1
+ /transl_table=11
+ /product="threonine dehydratase"
+ /protein_id="YP_001572689.1"
+ /db_xref="GI:161505577"
+ /db_xref="InterPro:IPR000634"
+ /db_xref="InterPro:IPR001721"
+ /db_xref="InterPro:IPR001926"
+ /db_xref="InterPro:IPR005787"
+ /translation="MMAESQPLSAAPEGAEYLRAVLRAPVYEAAQVTPLQKMEKLSSR
+ LDNVILVKREDRQPVHSFKLRGAYAMMAGLTEEQKAHGVITASAGNHAQGVAFSSARL
+ GVKSLIVMPKATADIKVDAVRGFGGEVLLHGANFDEAKAKAIELAQQQGFIWVPPFDH
+ PMVIAGQGTLALELLQQDSHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAEDS
+ ACLKAALEAGHPVDLPRVGLFAEGVAVKRIGDETFRLCQEYLDDIVTVDSDAICAAMK
+ DLFEDVRAVAEPSGALALAGMKKYIAQHNIHGERLAHVLSGANVNFHGLRYVSERCEL
+ GEQREALLAVTIPEEKGSFLKFCQLLGGRMVTEFNYRFADAKNACIFVGVRVSQGLEE
+ RKEILTQLRDGGYSVVDLSDDEMAKLHVRYMVGGRPSKPLQERLFSFEFPESPGALLK
+ FLHTLGTHWNISLFHYRSHGTDYGRVLAAFELGDHEPDFETRLHELGYECHDESNNPA
+ FRFFLAG"
+ misc_feature complement(3679893..3681395)
+ /locus_tag="SARI_03747"
+ /note="threonine dehydratase; Reviewed; Region: PRK09224"
+ /db_xref="CDD:236417"
+ misc_feature complement(3680472..3681383)
+ /locus_tag="SARI_03747"
+ /note="Threonine dehydratase: The first step in amino acid
+ degradation is the removal of nitrogen. Although the
+ nitrogen atoms of most amino acids are transferred to
+ alpha-ketoglutarate before removal, the alpha-amino group
+ of threonine can be directly...; Region: Thr-dehyd;
+ cd01562"
+ /db_xref="CDD:107205"
+ misc_feature complement(order(3680472..3680483,3680580..3680588,
+ 3680598..3680600,3680607..3680612,3680619..3680621,
+ 3680826..3680831,3681267..3681272,3681357..3681362,
+ 3681369..3681371,3681378..3681383))
+ /locus_tag="SARI_03747"
+ /note="tetramer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:107205"
+ misc_feature complement(order(3680487..3680489,3680856..3680870,
+ 3681165..3681167,3681246..3681248))
+ /locus_tag="SARI_03747"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:107205"
+ misc_feature complement(3681246..3681248)
+ /locus_tag="SARI_03747"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:107205"
+ misc_feature complement(3680166..3680420)
+ /locus_tag="SARI_03747"
+ /note="First of two tandem C-terminal ACT domains of
+ threonine dehydratase I (ThrD-I; L-threonine hydrolyase);
+ Region: ACT_ThrD-I_1; cd04906"
+ /db_xref="CDD:153178"
+ misc_feature complement(3680367..3680384)
+ /locus_tag="SARI_03747"
+ /note="putative Ile/Val binding site [chemical binding];
+ other site"
+ /db_xref="CDD:153178"
+ misc_feature complement(3679896..3680135)
+ /locus_tag="SARI_03747"
+ /note="Second of two tandem C-terminal ACT domains of
+ threonine dehydratase I (ThrD-I; L-threonine hydrolyase);
+ Region: ACT_ThrD-I_2; cd04907"
+ /db_xref="CDD:153179"
+ misc_feature complement(3680082..3680099)
+ /locus_tag="SARI_03747"
+ /note="putative Ile/Val binding site [chemical binding];
+ other site"
+ /db_xref="CDD:153179"
+ gene complement(3681431..3683242)
+ /locus_tag="SARI_03748"
+ CDS complement(3681431..3683242)
+ /locus_tag="SARI_03748"
+ /inference="protein motif:BlastProDom:IPR000581"
+ /inference="protein motif:HMMPanther:IPR000581"
+ /inference="protein motif:HMMPfam:IPR000581"
+ /inference="protein motif:HMMTigr:IPR004404"
+ /inference="protein motif:ScanRegExp:IPR000581"
+ /inference="protein motif:superfamily:IPR001697"
+ /note="'catalyzes the dehydration of
+ 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate
+ in valine and isoleucine biosynthesis'"
+ /codon_start=1
+ /transl_table=11
+ /product="dihydroxy-acid dehydratase"
+ /protein_id="YP_001572690.1"
+ /db_xref="GI:161505578"
+ /db_xref="InterPro:IPR000581"
+ /db_xref="InterPro:IPR001697"
+ /db_xref="InterPro:IPR004404"
+ /translation="MAGARALWRATGMTDADFGKPIIAVVNSFTQFVPGHVHLRDLGK
+ LVAEQIEAAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRELIADSVEYMVNAHCADAM
+ VCISNCDKITPGMLMASLRLNIPVIFVSGGPMEAGKTKLSDQIIKLDLVDAMIQGADP
+ KVSDSQSNQVERSACPTCGSCSGMFTANSMNCLTEALGLSQPGNGSLLATHAERKQLF
+ LNAGKRIVELTKRYYEQDDESALPRNIANKAAFENAMTLDIAMGGSTNTVLHLLAAAQ
+ EAEIDFTMSDIDKLSRKVPQLCKVAPSTQKYHMEDVHRAGGVLGILGELDRVGLVHRD
+ VKNVLGLTLPQTLEQYDIMVTKDETVKQMFRAGPAGIRTTQAFSQACYWDSLDDDRAE
+ GCIRSLEHAYSKDGGLAVLYGNFAENGCIVKTAGVDDSILKFTGPAKVYESQDDAVEA
+ ILGGKVVEGDVVVIRYEGPKGGPGMQEMLYPTSFLKSMGLGKACALITDGRFSGGTSG
+ LSIGHVSPEAASGGTIALIEDGDTIAIDIPNRSIQLQLSEAEIAARREAQEARGDKAW
+ TPKDRQRQVSFALRAYASLATSADKGAVRDKSKLGGL"
+ misc_feature complement(3681437..3683242)
+ /locus_tag="SARI_03748"
+ /note="dihydroxy-acid dehydratase; Provisional; Region:
+ PRK12448"
+ /db_xref="CDD:237104"
+ gene complement(3683349..3684281)
+ /locus_tag="SARI_03749"
+ CDS complement(3683349..3684281)
+ /locus_tag="SARI_03749"
+ /inference="protein motif:BlastProDom:IPR001544"
+ /inference="protein motif:HMMPanther:IPR001544"
+ /inference="protein motif:HMMPfam:IPR001544"
+ /inference="protein motif:HMMTigr:IPR005785"
+ /inference="protein motif:ScanRegExp:IPR001544"
+ /inference="protein motif:superfamily:IPR001544"
+ /inference="similar to AA sequence:INSD:AAL22753.1"
+ /note="catalyzes the transamination of the branched-chain
+ amino acids to their respective alpha-keto acids"
+ /codon_start=1
+ /transl_table=11
+ /product="branched-chain amino acid aminotransferase"
+ /protein_id="YP_001572691.1"
+ /db_xref="GI:161505579"
+ /db_xref="InterPro:IPR001544"
+ /db_xref="InterPro:IPR005785"
+ /translation="MTTKKADYIWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYD
+ SHKGPVVFRHREHMQRLHDSAKIYRFPVSQSIDELMEACRAVIRKNNLTSAYIRPLVF
+ VGDVGMGVNPPPGYTTDVIIAAFPWGAYLGAEALDQGIDAMVSSWNRAAPNTIPTAAK
+ AGGNYLSSLLVGSEARRHGYQEGIALDVNGYISEGAGENLFEVKDGVLFTPPFISSAL
+ PGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSVDGIQVGAG
+ RCGPVTKRIQQAFFGLFTGETEDKWGWLDQVNPK"
+ misc_feature complement(3683391..3684266)
+ /locus_tag="SARI_03749"
+ /note="Branched-chain amino acid
+ aminotransferase/4-amino-4-deoxychorismate lyase [Amino
+ acid transport and metabolism / Coenzyme metabolism];
+ Region: IlvE; COG0115"
+ /db_xref="CDD:223193"
+ misc_feature complement(3683397..3684218)
+ /locus_tag="SARI_03749"
+ /note="BCAT_beta_family: Branched-chain aminotransferase
+ catalyses the transamination of the branched-chain amino
+ acids leusine, isoleucine and valine to their respective
+ alpha-keto acids, alpha-ketoisocaproate,
+ alpha-keto-beta-methylvalerate and...; Region:
+ BCAT_beta_family; cd01557"
+ /db_xref="CDD:238798"
+ misc_feature complement(order(3683721..3683723,3683763..3683765,
+ 3683775..3683777,3683781..3683783,3683796..3683798,
+ 3683919..3683921,3683946..3683948,3683958..3683966,
+ 3683982..3683984,3683988..3683990,3684081..3684083,
+ 3684171..3684173,3684177..3684179,3684183..3684197,
+ 3684204..3684218))
+ /locus_tag="SARI_03749"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238798"
+ misc_feature complement(order(3683508..3683510,3683616..3683621,
+ 3683700..3683702,3683787..3683789,3683802..3683804,
+ 3683952..3683954,3684102..3684104,3684171..3684173,
+ 3684186..3684188))
+ /locus_tag="SARI_03749"
+ /note="substrate-cofactor binding pocket; other site"
+ /db_xref="CDD:238798"
+ misc_feature complement(3683802..3683804)
+ /locus_tag="SARI_03749"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:238798"
+ gene complement(3684299..3684562)
+ /gene="ilvM"
+ /locus_tag="SARI_03750"
+ CDS complement(3684299..3684562)
+ /gene="ilvM"
+ /locus_tag="SARI_03750"
+ /inference="similar to AA sequence:REFSEQ:YP_218794.1"
+ /note="'KEGG: sec:SC3807 2.8e-40 ilvM; acetolactate
+ synthase II, small subunit K01653;
+ COG: COG3978 Acetolactate synthase (isozyme II), small
+ (regulatory) subunit;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="acetolactate synthase 2 regulatory subunit"
+ /protein_id="YP_001572692.1"
+ /db_xref="GI:161505580"
+ /translation="MMQHQVNVSARFNPETLERVLRVVRHRGFQVCSMNMEAATDAQN
+ INIELTVASPRSVDLLFSQLSKLVDVAHVAICQSAATSQQIRA"
+ misc_feature complement(3684335..3684562)
+ /gene="ilvM"
+ /locus_tag="SARI_03750"
+ /note="acetolactate synthase 2 regulatory subunit;
+ Provisional; Region: ilvM; PRK11152"
+ /db_xref="CDD:236862"
+ gene complement(3684559..3686205)
+ /locus_tag="SARI_03751"
+ CDS complement(3684559..3686205)
+ /locus_tag="SARI_03751"
+ /inference="protein motif:HMMPfam:IPR011766"
+ /inference="protein motif:HMMPfam:IPR012000"
+ /inference="protein motif:HMMPfam:IPR012001"
+ /inference="protein motif:HMMPIR:IPR000399"
+ /inference="protein motif:HMMPIR:IPR004407"
+ /inference="protein motif:HMMTigr:IPR012846"
+ /inference="protein motif:ScanRegExp:IPR000399"
+ /inference="similar to AA sequence:INSD:AAO70921.1"
+ /note="catalyzes the formation of 2-acetolactate from
+ pyruvate; also known as acetolactate synthase large
+ subunit"
+ /codon_start=1
+ /transl_table=11
+ /product="acetolactate synthase 2 catalytic subunit"
+ /protein_id="YP_001572693.1"
+ /db_xref="GI:161505581"
+ /db_xref="InterPro:IPR000399"
+ /db_xref="InterPro:IPR004407"
+ /db_xref="InterPro:IPR011766"
+ /db_xref="InterPro:IPR012000"
+ /db_xref="InterPro:IPR012001"
+ /db_xref="InterPro:IPR012846"
+ /translation="MNGAQWVVHALRAQGVKTVFGYPGGAIMPVYDALYDGGVEHLLC
+ RHEQGAVMAAIGYARSTGKTGVCIATSGPGATNLITGLADALLDSVPVVAITGQVSAP
+ FIGTDAFQEVDVLGLSLACTKHSFLVQSLAELPRIMAEAFEVANAGRPGPVLVDIPKD
+ IQLASGALEPYFTTVTNEAMFPQAAVEKARTMLSQAQKPILYVGGGVGMAQAVPALRE
+ FIALTQMPVTCTLKGLGAVEADYPYYMGMLGMHGAKAANYAVQQCDLLIAVGARFDDR
+ VTGKLNTFAPNASVIHLDIDPAELNKLRQAHVALQGDLNTLLPALQQPLAIDEWRRHN
+ AAMRSEHAWRYDHPGEAIYAPLLLKLLSERKPADCVVTTDVGQHQMWSAQHMTYSRPE
+ NFITSSGLGTMGFGLPAAVGAQVARPNDTVICISGDGSFMMNVQELGTVKRKQLPLKI
+ VLLDNQRLGMVRQWQQLFFQERYSETTLTDNPDFLMLASAFGIPGQHITRKDQVEAAL
+ DTMLASEGPYLLHVSIDELENVWPLVPPGASNSEMLEKLS"
+ misc_feature complement(3684562..3686205)
+ /locus_tag="SARI_03751"
+ /note="acetolactate synthase 2 catalytic subunit;
+ Reviewed; Region: PRK08978"
+ /db_xref="CDD:181601"
+ misc_feature complement(3685729..3686193)
+ /locus_tag="SARI_03751"
+ /note="Pyrimidine (PYR) binding domain of POX and related
+ proteins; Region: TPP_PYR_POX_like; cd07035"
+ /db_xref="CDD:132918"
+ misc_feature complement(order(3685942..3685947,3685954..3685956,
+ 3685966..3685968,3685987..3685989,3686023..3686031,
+ 3686035..3686040,3686047..3686052,3686059..3686061,
+ 3686068..3686088,3686110..3686112,3686122..3686124,
+ 3686134..3686139,3686152..3686154))
+ /locus_tag="SARI_03751"
+ /note="PYR/PP interface [polypeptide binding]; other site"
+ /db_xref="CDD:132918"
+ misc_feature complement(order(3685846..3685848,3685855..3685857,
+ 3685957..3685959,3685966..3685971,3685975..3685980,
+ 3685987..3685989,3686062..3686064,3686068..3686079,
+ 3686083..3686085,3686110..3686112,3686122..3686124,
+ 3686131..3686139))
+ /locus_tag="SARI_03751"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:132918"
+ misc_feature complement(order(3685975..3685977,3685987..3685989,
+ 3686065..3686067,3686137..3686139))
+ /locus_tag="SARI_03751"
+ /note="TPP binding site [chemical binding]; other site"
+ /db_xref="CDD:132918"
+ misc_feature complement(3685243..3685650)
+ /locus_tag="SARI_03751"
+ /note="Thiamine pyrophosphate enzyme, central domain;
+ Region: TPP_enzyme_M; pfam00205"
+ /db_xref="CDD:215786"
+ misc_feature complement(3684595..3685152)
+ /locus_tag="SARI_03751"
+ /note="Thiamine pyrophosphate (TPP) family,
+ Acetohydroxyacid synthase (AHAS) subfamily, TPP-binding
+ module; composed of proteins similar to the large
+ catalytic subunit of AHAS. AHAS catalyzes the condensation
+ of two molecules of pyruvate to give the...; Region:
+ TPP_AHAS; cd02015"
+ /db_xref="CDD:238973"
+ misc_feature complement(order(3684841..3684843,3684907..3684909,
+ 3684916..3684924,3684997..3684999,3685003..3685005,
+ 3685072..3685083))
+ /locus_tag="SARI_03751"
+ /note="TPP-binding site [chemical binding]; other site"
+ /db_xref="CDD:238973"
+ misc_feature complement(order(3684736..3684738,3684745..3684747,
+ 3684757..3684762,3684877..3684879,3684898..3684903,
+ 3684907..3684912,3684997..3684999,3685003..3685005,
+ 3685012..3685014))
+ /locus_tag="SARI_03751"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238973"
+ gene 3686793..3688313
+ /locus_tag="SARI_03752"
+ CDS 3686793..3688313
+ /locus_tag="SARI_03752"
+ /inference="protein motif:HMMPanther:IPR001208"
+ /inference="protein motif:HMMPfam:IPR000523"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR004482"
+ /inference="protein motif:ScanRegExp:IPR002078"
+ /inference="similar to AA sequence:INSD:AAF33484.1"
+ /note="'among the AAA+ ATPases, the YifB protease family
+ belongs to the Helix 2 insert clade; unknown function'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative ATP-dependent protease"
+ /protein_id="YP_001572694.2"
+ /db_xref="GI:448236285"
+ /db_xref="InterPro:IPR000523"
+ /db_xref="InterPro:IPR001208"
+ /db_xref="InterPro:IPR002078"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR004482"
+ /translation="MSLSIVHTRAALGVNAPPITIEVHISNGLPGLTMVGLPETTVKE
+ ARDRVRSAIINSGYEFPAKKITINLAPADLPKEGGRYDLPIAVALLAASEQLTASNLE
+ AYELVGELALTGALRGVPGAISSATEAIRAGRNIIVATENAAEVGLISREGCFIADHL
+ QTVCAFLEGKHALERPLAQDMVSPITTADLSDVIGQEQGKRGLEITAAGGHNLLLIGP
+ PGTGKTMLASRLSGILPPLSNEEALESAAILSLVNADTVQKRWQQRPFRSPHHSASLT
+ AMVGGGAIPAPGEISLAHNGILFLDELPEFERRTLDALREPIESGQIHLSRTRAKITY
+ PARFQLIAAMNPSPTGHYQGNHNRCTPEQTLRYLSKLSGPFLDRFDLSLEIPLPPPGI
+ LSQHASKGENSATVKKRVIAAQERQYRRQKKLNARLEGSEIQKYCVLHHDDARWLEDT
+ LVHLGLSIRAWQRLLKVARTIADIEQADEISRQHLQEAVSYRAIDRLLIHLQKLLA"
+ misc_feature 3686793..3688310
+ /locus_tag="SARI_03752"
+ /note="putative ATP-dependent protease; Provisional;
+ Region: PRK09862"
+ /db_xref="CDD:182120"
+ misc_feature 3686853..3687218
+ /locus_tag="SARI_03752"
+ /note="Subunit ChlI of Mg-chelatase; Region: ChlI;
+ pfam13541"
+ /db_xref="CDD:205719"
+ misc_feature 3687372..3687953
+ /locus_tag="SARI_03752"
+ /note="The AAA+ (ATPases Associated with a wide variety of
+ cellular Activities) superfamily represents an ancient
+ group of ATPases belonging to the ASCE (for additional
+ strand, catalytic E) division of the P-loop NTPase fold.
+ The ASCE division also includes ABC; Region: AAA; cd00009"
+ /db_xref="CDD:99707"
+ misc_feature 3687441..3687464
+ /locus_tag="SARI_03752"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature order(3687444..3687467,3687693..3687695,3687825..3687827)
+ /locus_tag="SARI_03752"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:99707"
+ misc_feature 3687681..3687698
+ /locus_tag="SARI_03752"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature 3687924..3687926
+ /locus_tag="SARI_03752"
+ /note="arginine finger; other site"
+ /db_xref="CDD:99707"
+ misc_feature 3687990..3688268
+ /locus_tag="SARI_03752"
+ /note="Magnesium chelatase, subunit ChlI; Region:
+ Mg_chelatase_2; pfam13335"
+ /db_xref="CDD:222052"
+ gene complement(3688338..3688676)
+ /locus_tag="SARI_03753"
+ CDS complement(3688338..3688676)
+ /locus_tag="SARI_03753"
+ /inference="protein motif:HMMPfam:IPR007335"
+ /inference="similar to AA sequence:INSD:CAD09466.1"
+ /note="'COG: COG3085 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572695.1"
+ /db_xref="GI:161505583"
+ /db_xref="InterPro:IPR007335"
+ /translation="MAESFTTTNRYFDNKHYPRGFSRHGDFTIKEAQLLERHGHAFND
+ LDLGKREPVTEEEKLFVAVCRGEREPVTDAERVWSKYMTRIKRPKRFHTLSGGKPQVE
+ GAEDYTEADD"
+ misc_feature complement(3688341..3688676)
+ /locus_tag="SARI_03753"
+ /note="hypothetical protein; Provisional; Region:
+ PRK11027"
+ /db_xref="CDD:236825"
+ gene 3688783..3689631
+ /locus_tag="SARI_03754"
+ CDS 3688783..3689631
+ /locus_tag="SARI_03754"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="protein motif:HMMPfam:IPR005119"
+ /inference="similar to AA sequence:INSD:AAX67710.1"
+ /note="Negatively regulates the transcription of the
+ flagellar master operon flhDC by binding to the upstream
+ region of the operon"
+ /codon_start=1
+ /transl_table=11
+ /product="transcriptional regulator HdfR"
+ /protein_id="YP_001572696.1"
+ /db_xref="GI:161505584"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR005119"
+ /db_xref="InterPro:IPR011991"
+ /translation="MESTVDTELLKTFLEVSRTRHFGRAAEALYLTQSAVSFRIRQLE
+ NQLGVNLFTRHRNNIRLTAAGEKLLPYAETLMNTWQAARKEVAHTSRHNEFSIGASAS
+ LWECMLNDWLGRLYQRQEPQNGLQFEARIAQRQSLVKQLHERQLDLLITTEAPKMDEF
+ SSELLGHFTLALYCSSPARMKSELNYLRLEWGPDFQQHEAGLIAADEVPVLTTSSAEL
+ ARQQLNALNGCSWLPVNWANEKGGLHTVADSATLSRPLYAIWLQNSDKYSLICDLLKT
+ DVLDRQ"
+ misc_feature 3688795..3689628
+ /locus_tag="SARI_03754"
+ /note="transcriptional regulator HdfR; Provisional;
+ Region: PRK03601"
+ /db_xref="CDD:235137"
+ misc_feature 3688804..3688980
+ /locus_tag="SARI_03754"
+ /note="Bacterial regulatory helix-turn-helix protein, lysR
+ family; Region: HTH_1; pfam00126"
+ /db_xref="CDD:215735"
+ misc_feature 3689062..3689574
+ /locus_tag="SARI_03754"
+ /note="LysR substrate binding domain; Region:
+ LysR_substrate; pfam03466"
+ /db_xref="CDD:217576"
+ misc_feature order(3689107..3689112,3689116..3689121,3689131..3689133,
+ 3689143..3689145,3689155..3689175,3689410..3689427,
+ 3689443..3689448,3689452..3689457)
+ /locus_tag="SARI_03754"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:176102"
+ gene complement(3689727..3689799)
+ /locus_tag="SARI_03755"
+ tRNA complement(3689727..3689799)
+ /locus_tag="SARI_03755"
+ /product="tRNA-Trp"
+ gene complement(3689811..3689884)
+ /locus_tag="SARI_03756"
+ tRNA complement(3689811..3689884)
+ /locus_tag="SARI_03756"
+ /product="tRNA-Asp"
+ gene complement(3689938..3690053)
+ /locus_tag="SARI_03757"
+ rRNA complement(3689938..3690053)
+ /locus_tag="SARI_03757"
+ /product="5S ribosomal RNA"
+ /inference="nucleotide motif:Rfam:RF00001"
+ /note="Rfam score 83.22"
+ gene complement(3690242..3693148)
+ /locus_tag="SARI_03758"
+ rRNA complement(3690242..3693148)
+ /locus_tag="SARI_03758"
+ /product="23S ribosomal RNA"
+ /note="Gene model created based on homology with SPA4016"
+ gene complement(3693335..3693407)
+ /locus_tag="SARI_03759"
+ tRNA complement(3693335..3693407)
+ /locus_tag="SARI_03759"
+ /product="tRNA-Glu"
+ gene complement(3693489..3695035)
+ /locus_tag="SARI_03760"
+ rRNA complement(3693489..3695035)
+ /locus_tag="SARI_03760"
+ /product="16S ribosomal RNA"
+ /inference="nucleotide motif:Rfam:RF00177"
+ /note="Rfam score 355.33;
+ 5 domain"
+ gene 3695512..3696216
+ /locus_tag="SARI_03761"
+ CDS 3695512..3696216
+ /locus_tag="SARI_03761"
+ /inference="protein motif:Gene3D:IPR000524"
+ /inference="protein motif:HMMPfam:IPR000524"
+ /inference="protein motif:HMMPfam:IPR011711"
+ /inference="protein motif:HMMSmart:IPR000524"
+ /inference="similar to AA sequence:REFSEQ:NP_807269.1"
+ /note="'KEGG: reh:H16_A3019 0.0043 hutC; histidine
+ utilization repressor;
+ COG: COG2186 Transcriptional regulators;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572697.1"
+ /db_xref="GI:161505585"
+ /db_xref="InterPro:IPR000524"
+ /db_xref="InterPro:IPR011711"
+ /translation="MPLSAQQLAAQKNLSYVLAEKLAQRILKGDYAPGTILPGEIELG
+ ERYGVSRTAIREAVKTLTAKGMVLPRPRIGTRVMPQGNWNFLDQELLTWWMTEENFHQ
+ VVDHFLVMRISLEPQACRLAATIGTPEQKAQLNTLMEEMVALKKHFKRERWIEVDMAW
+ HGHIYEMSANPFLISFATLFHSVYRTYFTSITYNEVVKLDLHQAIVDAIADGDGERAF
+ QACQALLIAPNERPDN"
+ misc_feature 3695524..3696204
+ /locus_tag="SARI_03761"
+ /note="Transcriptional regulators [Transcription]; Region:
+ FadR; COG2186"
+ /db_xref="CDD:225097"
+ misc_feature 3695551..3695742
+ /locus_tag="SARI_03761"
+ /note="Winged helix-turn-helix (WHTH) DNA-binding domain
+ of the GntR family of transcriptional regulators; Region:
+ WHTH_GntR; cd07377"
+ /db_xref="CDD:153418"
+ misc_feature order(3695554..3695556,3695623..3695625,3695629..3695634,
+ 3695656..3695670,3695674..3695679,3695686..3695688,
+ 3695716..3695721,3695725..3695736)
+ /locus_tag="SARI_03761"
+ /note="DNA-binding site [nucleotide binding]; DNA binding
+ site"
+ /db_xref="CDD:153418"
+ misc_feature 3695839..3696186
+ /locus_tag="SARI_03761"
+ /note="This entry represents the C-terminal ligand binding
+ domain of many members of the GntR family; Region: FCD;
+ smart00895"
+ /db_xref="CDD:214892"
+ gene 3696228..3697655
+ /locus_tag="SARI_03762"
+ CDS 3696228..3697655
+ /locus_tag="SARI_03762"
+ /inference="protein motif:FPrintScan:IPR001411"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="protein motif:HMMTigr:IPR004638"
+ /inference="similar to AA sequence:INSD:AAL22745.1"
+ /note="'KEGG: sgl:SG1466 7.9e-09 deTHIobiotin synthase
+ K01935;
+ COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572698.1"
+ /db_xref="GI:161505586"
+ /db_xref="InterPro:IPR001411"
+ /db_xref="InterPro:IPR004638"
+ /db_xref="InterPro:IPR011701"
+ /translation="MTSKKARSMAGLPWIAAMAFFMQALDATILNTALPAIAHSLNRS
+ PLAMQSAIISYTLTVAMLIPVSGWLADRFGTRRVFMVAVSLFTLGSLACALSSSLSEL
+ VIFRVVQGVGGAMMMPVARLALLRAYPRSELLPVLNFVTMPGLVGPILGPVLGGVLVT
+ WASWHWIFLINIPIGVAGILYARKYMPNFTTPRRKFDMTGFFLFGLSLVMFSSGMELF
+ GEKIVATWIASAIIFCSIVLLLAYIRHARHHPTPLISLSLFKTRTFSVGIAGNLATRL
+ GTGCVPFLMPLMLQVGFGYPALIAGCMMAPTALGSIIAKSTVTQVLRRLGYRKTLVGI
+ TVFIGLMIAQFSFQSPAMPIWMLVLPLFILGMAMSTQFTAMNTITLADLTDDNASSGN
+ SVLAVTQQLSISLGVAISAAVLRIYEGFTGTSTVEQFHYTFITMGAITIVSSLMFMLL
+ RAKDGNNLIKERHKSKPTHAPSKPE"
+ misc_feature 3696267..3697625
+ /locus_tag="SARI_03762"
+ /note="putative transporter; Provisional; Region:
+ PRK10504"
+ /db_xref="CDD:182502"
+ misc_feature 3696267..>3696794
+ /locus_tag="SARI_03762"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature order(3696306..3696308,3696315..3696323,3696327..3696332,
+ 3696381..3696383,3696390..3696395,3696402..3696404,
+ 3696414..3696419,3696423..3696428,3696564..3696569,
+ 3696576..3696581,3696588..3696593,3696600..3696602,
+ 3696636..3696641,3696648..3696653,3696669..3696671)
+ /locus_tag="SARI_03762"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ misc_feature <3696993..3697580
+ /locus_tag="SARI_03762"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ gene complement(3697621..3698610)
+ /locus_tag="SARI_03763"
+ CDS complement(3697621..3698610)
+ /locus_tag="SARI_03763"
+ /inference="protein motif:HMMPfam:IPR000843"
+ /inference="protein motif:HMMPfam:IPR001761"
+ /inference="protein motif:HMMSmart:IPR000843"
+ /inference="protein motif:ScanRegExp:IPR000843"
+ /inference="protein motif:superfamily:IPR010982"
+ /inference="similar to AA sequence:INSD:CAD03109.1"
+ /note="DNA-binding transcriptional repressor of ribose
+ metabolism"
+ /codon_start=1
+ /transl_table=11
+ /product="transcriptional repressor RbsR"
+ /protein_id="YP_001572699.1"
+ /db_xref="GI:161505587"
+ /db_xref="InterPro:IPR000843"
+ /db_xref="InterPro:IPR001761"
+ /db_xref="InterPro:IPR010982"
+ /translation="MKDVARLAGVSTSTVSHVINKDRFVSEAITEKVEAAIKSLNYAP
+ SALARSLKLNQTRTIGMLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMN
+ RNLETLMQKRVDGLLLLCTETHQPSREIMQRYPSIPTVMMDWSPFDGEGDSDLIQDNS
+ LLGGDLATQHLIDKGFTRIACITGPLDKTPARLRLEGYRAAMKRARLAIPKGYEITGD
+ FEFGGGFDAMQALLTHPQRPQAVFTGNDAMAVGAYQALYQAGLRIPQDMAVIGYDDIE
+ LARYMTPPLTTIHQPKDELGELAIDVLIHRMAQPALQQQRLQLTPVLTVRGSV"
+ misc_feature complement(3697624..3698610)
+ /locus_tag="SARI_03763"
+ /note="transcriptional repressor RbsR; Provisional;
+ Region: PRK10423"
+ /db_xref="CDD:182448"
+ misc_feature complement(3698455..3698607)
+ /locus_tag="SARI_03763"
+ /note="Helix-turn-helix (HTH) DNA binding domain of the
+ LacI family of transcriptional regulators; Region:
+ HTH_LacI; cd01392"
+ /db_xref="CDD:143331"
+ misc_feature complement(order(3698455..3698460,3698464..3698469,
+ 3698476..3698478,3698485..3698487,3698524..3698526,
+ 3698533..3698538,3698551..3698553,3698560..3698565,
+ 3698569..3698583,3698605..3698607))
+ /locus_tag="SARI_03763"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:143331"
+ misc_feature complement(3698458..3698487)
+ /locus_tag="SARI_03763"
+ /note="domain linker motif; other site"
+ /db_xref="CDD:143331"
+ misc_feature complement(3697627..3698439)
+ /locus_tag="SARI_03763"
+ /note="Ligand-binding domain of purine repressor, PurR,
+ which functions as the master regulatory protein of de
+ novo purine nucleotide biosynthesis in Escherichia coli;
+ Region: PBP1_PurR; cd06275"
+ /db_xref="CDD:107270"
+ misc_feature complement(order(3697630..3697632,3697771..3697776,
+ 3697780..3697782,3697837..3697839,3697849..3697851,
+ 3697861..3697863,3697945..3697947,3698278..3698280,
+ 3698299..3698301,3698338..3698346,3698350..3698352,
+ 3698362..3698364,3698410..3698412))
+ /locus_tag="SARI_03763"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:107270"
+ misc_feature complement(order(3697792..3697794,3697954..3697956,
+ 3698029..3698031,3698041..3698043,3698047..3698049,
+ 3698401..3698403))
+ /locus_tag="SARI_03763"
+ /note="ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:107270"
+ gene complement(3698623..3699552)
+ /locus_tag="SARI_03764"
+ CDS complement(3698623..3699552)
+ /locus_tag="SARI_03764"
+ /inference="protein motif:HMMPfam:IPR011611"
+ /inference="protein motif:HMMTigr:IPR011877"
+ /inference="protein motif:ScanRegExp:IPR002173"
+ /inference="similar to AA sequence:REFSEQ:YP_152827.1"
+ /note="catalyzes the formation of D-ribose 5-phosphate
+ from ribose"
+ /codon_start=1
+ /transl_table=11
+ /product="ribokinase"
+ /protein_id="YP_001572700.1"
+ /db_xref="GI:161505588"
+ /db_xref="InterPro:IPR002173"
+ /db_xref="InterPro:IPR011611"
+ /db_xref="InterPro:IPR011877"
+ /translation="MKTAGNLIVLGSINADHILNLESFPTPGETVTGSHYQVAFGGKG
+ ANQAVAAGRSGANIAFIACTGDDDIGDSIRKQLVSDRIDIEPVSVIKGESTGVALIFV
+ NGEGENVIGIHAGANAALSPALVDAQRERIAQADALLMQLESPLESVLAAARIAHQNH
+ TTVALNPAPARELPDELLALVDIITPNETEAEKLTGVRVENDDDAAKAAQVLHVKGIR
+ TVLITLGSRGVWASVNGEGRRVPGFKVEAVDTIAAGDTFNGAFITAILEAMPLPEAIR
+ FAHAAAAIAVTRKGAQPSVPWREEIEAFLRQQG"
+ misc_feature complement(3698629..3699537)
+ /locus_tag="SARI_03764"
+ /note="Sugar kinases, ribokinase family [Carbohydrate
+ transport and metabolism]; Region: RbsK; COG0524"
+ /db_xref="CDD:223598"
+ misc_feature complement(3698662..3699537)
+ /locus_tag="SARI_03764"
+ /note="Ribokinase catalyses the phosphorylation of ribose
+ to ribose-5-phosphate using ATP. This reaction is the
+ first step in the ribose metabolism. It traps ribose
+ within the cell after uptake and also prepares the sugar
+ for use in the synthesis of nucleotides...; Region:
+ ribokinase; cd01174"
+ /db_xref="CDD:238579"
+ misc_feature complement(order(3698680..3698682,3698788..3698790,
+ 3698797..3698802,3699124..3699126,3699217..3699219,
+ 3699223..3699225,3699253..3699255,3699259..3699261,
+ 3699415..3699417,3699424..3699432,3699505..3699507,
+ 3699511..3699513))
+ /locus_tag="SARI_03764"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:238579"
+ misc_feature complement(order(3699046..3699048,3699211..3699234,
+ 3699250..3699258,3699262..3699264,3699424..3699426,
+ 3699463..3699483,3699496..3699498,3699502..3699504))
+ /locus_tag="SARI_03764"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238579"
+ misc_feature complement(order(3698695..3698697,3698704..3698709,
+ 3698716..3698718,3698782..3698784,3698791..3698796,
+ 3698803..3698805,3698812..3698814,3698830..3698832,
+ 3698869..3698871,3698878..3698886,3698992..3698994))
+ /locus_tag="SARI_03764"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238579"
+ gene complement(3699684..3700574)
+ /locus_tag="SARI_03765"
+ CDS complement(3699684..3700574)
+ /locus_tag="SARI_03765"
+ /inference="protein motif:HMMPfam:IPR001761"
+ /inference="similar to AA sequence:INSD:AAL22742.1"
+ /note="periplasmic substrate-binding component of the
+ ATP-dependent ribose transport system"
+ /codon_start=1
+ /transl_table=11
+ /product="D-ribose transporter subunit RbsB"
+ /protein_id="YP_001572701.1"
+ /db_xref="GI:161505589"
+ /db_xref="InterPro:IPR001761"
+ /translation="MNMKKLATLVSAVALSATVSANAMAKDTIALVISTLNNPFFVSL
+ KDGAQKEADKLGYNLVVLDSQNNPAKELANVQDLTVRGTKILLINPTDSDAVGNAVKM
+ ANQAKIPVITLDRQATKGNVVSHIASDNVLGGKIAGDYIAKKAGEGAKVIELQGIAGT
+ SAARERGEGFQQAVAAHKFNVLASQPADFDRTKGLNVMQNLLTAHPDVQAVFAQNDEM
+ ALGALRALQTAGKADVMVVGFDGTPDGEKAVKDGKLAATIAQLPDQIGAKGVEVADKV
+ LKSEKVQAKYPVDLKLVIKQ"
+ misc_feature complement(3699690..3700574)
+ /locus_tag="SARI_03765"
+ /note="D-ribose transporter subunit RbsB; Provisional;
+ Region: PRK10653"
+ /db_xref="CDD:182620"
+ misc_feature complement(3699696..3700493)
+ /locus_tag="SARI_03765"
+ /note="Periplasmic sugar-binding domain of the
+ thermophilic Thermoanaerobacter tengcongensis ribose
+ binding protein (ttRBP) and its mesophilic homologs;
+ Region: PBP1_ribose_binding; cd06323"
+ /db_xref="CDD:107318"
+ misc_feature complement(order(3699795..3699797,3699855..3699857,
+ 3699930..3699932,3700008..3700010,3700077..3700079,
+ 3700089..3700091,3700230..3700235,3700308..3700310,
+ 3700452..3700457,3700461..3700463))
+ /locus_tag="SARI_03765"
+ /note="ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:107318"
+ misc_feature complement(order(3699966..3699968,3700020..3700025,
+ 3700032..3700037,3700071..3700073,3700083..3700085))
+ /locus_tag="SARI_03765"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:107318"
+ gene complement(3700599..3701564)
+ /gene="rbsC"
+ /locus_tag="SARI_03766"
+ CDS complement(3700599..3701564)
+ /gene="rbsC"
+ /locus_tag="SARI_03766"
+ /inference="protein motif:HMMPfam:IPR001851"
+ /inference="similar to AA sequence:INSD:CAD03112.1"
+ /note="functions to transport ribose at high affinity;
+ forms a complex with RbsA2C2B"
+ /codon_start=1
+ /transl_table=11
+ /product="ribose ABC transporter permease protein"
+ /protein_id="YP_001572702.1"
+ /db_xref="GI:161505590"
+ /db_xref="InterPro:IPR001851"
+ /translation="MTTQAVSGRRYFTKAWLLEQKSLIALLVLIAIVSTLSPNFFTVN
+ NLFNILQQTSVNAIMAVGMTLVILTSGIDLSVGSLLALTGAVAASIVGVEVNALVAVA
+ AALALGAAIGAVTGVIVAKGRVQAFIATLVMMLLLRGVTMVYTDGSPVNTGFTDNADL
+ FGWFGIGRPLGVPTPVWIMAIVFIAAWYMLHHTRLGRYIYALGGNEAATRLSGISVSK
+ VKIIVYSLCGLTASLAGIIEVARLSSAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIV
+ GTLIGALILGFLNNGLNLLGVSSYYQMIVKAVVILLAVLVDNKKQ"
+ misc_feature complement(3700767..3701432)
+ /gene="rbsC"
+ /locus_tag="SARI_03766"
+ /note="Branched-chain amino acid transport system /
+ permease component; Region: BPD_transp_2; pfam02653"
+ /db_xref="CDD:217165"
+ misc_feature complement(3700656..3701408)
+ /gene="rbsC"
+ /locus_tag="SARI_03766"
+ /note="Transmembrane subunit (TM) of Escherichia coli AraH
+ and related proteins. E. coli AraH is the TM of a
+ Periplasmic Binding Protein (PBP)-dependent ATP-Binding
+ Cassette (ABC) transporter involved in the uptake of the
+ monosaccharide arabinose. This group...; Region:
+ TM_PBP1_transp_AraH_like; cd06579"
+ /db_xref="CDD:119321"
+ misc_feature complement(3700890..3700946)
+ /gene="rbsC"
+ /locus_tag="SARI_03766"
+ /note="TM-ABC transporter signature motif; other site"
+ /db_xref="CDD:119321"
+ gene complement(3701570..3703075)
+ /locus_tag="SARI_03767"
+ CDS complement(3701570..3703075)
+ /locus_tag="SARI_03767"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:REFSEQ:YP_218782.1"
+ /note="with RbsBCD acts to import ribose into the cell;
+ RbsA contains 2 ATP-binding domain"
+ /codon_start=1
+ /transl_table=11
+ /product="D-ribose transporter ATP binding protein"
+ /protein_id="YP_001572703.1"
+ /db_xref="GI:161505591"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MDALLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKS
+ TMMKVLTGIYTRDAGSLLWLGKETTFNGPKSSQEAGIGIIHQELNLIPQLTIAENIFL
+ GREFVNRFGKIDWKKMYAEADVLLAKLNLRFKSDRLVGDLSIGDQQMVEIAKVLSFES
+ KVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRMKEIFEICDDVTVFRDGQ
+ FIAEREVATLTEDSLIEMMVGRKLEDQYPHLDNAPGEIRLKVDNLCGPGVNDVSFVLR
+ KGEILGISGLMGAGRTELMKVLYGAMPRTSGYVTLDGHEVVTRSPQDGLANGIVYISE
+ DRKRDGLVLGMSVKENMSLTALDYFSRAGGSLKHKDEQQAVGDFIRLFNVKTPSMEQA
+ IGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKADGLSIIL
+ VSSEMPEVLGMSDRIIVMHEGHLSGEFTREQATQEVLMAAAVGKLNRVNQE"
+ misc_feature complement(3701573..3703075)
+ /locus_tag="SARI_03767"
+ /note="D-ribose transporter ATP binding protein;
+ Provisional; Region: PRK10762"
+ /db_xref="CDD:236755"
+ misc_feature complement(3702410..3703063)
+ /locus_tag="SARI_03767"
+ /note="First domain of the ATP-binding cassette component
+ of monosaccharide transport system; Region:
+ ABC_Carb_Monos_I; cd03216"
+ /db_xref="CDD:213183"
+ misc_feature complement(3702944..3702967)
+ /locus_tag="SARI_03767"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213183"
+ misc_feature complement(order(3702479..3702481,3702575..3702580,
+ 3702797..3702799,3702941..3702949,3702953..3702958))
+ /locus_tag="SARI_03767"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213183"
+ misc_feature complement(order(3702797..3702799,3702821..3702829))
+ /locus_tag="SARI_03767"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213183"
+ misc_feature complement(order(3702623..3702637,3702782..3702796))
+ /locus_tag="SARI_03767"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213183"
+ misc_feature complement(3702575..3702592)
+ /locus_tag="SARI_03767"
+ /note="Walker B; other site"
+ /db_xref="CDD:213183"
+ misc_feature complement(3702557..3702568)
+ /locus_tag="SARI_03767"
+ /note="D-loop; other site"
+ /db_xref="CDD:213183"
+ misc_feature complement(3702473..3702493)
+ /locus_tag="SARI_03767"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213183"
+ misc_feature complement(3701657..3702316)
+ /locus_tag="SARI_03767"
+ /note="Second domain of the ATP-binding cassette component
+ of monosaccharide transport system; Region:
+ ABC_Carb_Monos_II; cd03215"
+ /db_xref="CDD:213182"
+ gene complement(3703084..3703503)
+ /locus_tag="SARI_03768"
+ CDS complement(3703084..3703503)
+ /locus_tag="SARI_03768"
+ /inference="protein motif:HMMPfam:IPR007721"
+ /inference="similar to AA sequence:REFSEQ:NP_462780.1"
+ /note="cytoplasmic mutarotase that catalyzes the
+ conversion between beta-pyran and beta-furan forms of
+ D-ribose; RbsD is required for efficient ribose
+ utilization in E. coli; rbsD-mutant E. coli strains are
+ unable to use ribose as a sole carbon source"
+ /codon_start=1
+ /transl_table=11
+ /product="D-ribose pyranase"
+ /protein_id="YP_001572704.1"
+ /db_xref="GI:161505592"
+ /db_xref="InterPro:IPR007721"
+ /translation="MKKGTVLNSEISSVISRLGHTDTLVVCDAGLPIPNSAARIDMAL
+ TQGVPSFMQVVDVVTREMQVEAAILATEIKQQNPQLHETLLTHLEQLQQYQGNTIKIS
+ YTTHEQFKKLTADSQAVIRSGECSPYANVILCAGVTF"
+ misc_feature complement(3703087..3703503)
+ /locus_tag="SARI_03768"
+ /note="D-ribose pyranase; Provisional; Region: PRK11797"
+ /db_xref="CDD:183318"
+ gene 3703588..3703743
+ /locus_tag="SARI_03769"
+ CDS 3703588..3703743
+ /locus_tag="SARI_03769"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572705.1"
+ /db_xref="GI:161505593"
+ /translation="MIAVETFRYRKSAEDNHLMAIILWESTDWVGRVSQRGPRHVDEG
+ LNLDLRT"
+ gene complement(3703720..3705588)
+ /gene="trkD"
+ /locus_tag="SARI_03770"
+ CDS complement(3703720..3705588)
+ /gene="trkD"
+ /locus_tag="SARI_03770"
+ /inference="protein motif:HMMPfam:IPR003855"
+ /inference="protein motif:HMMTigr:IPR003855"
+ /note="Responsible for the low-affinity transport of
+ potassium into the cell; involved in potassium ion uptake
+ under hyper-osmotic stress at a low pH"
+ /codon_start=1
+ /transl_table=11
+ /product="potassium transport protein Kup"
+ /protein_id="YP_001572706.1"
+ /db_xref="GI:161505594"
+ /db_xref="InterPro:IPR003855"
+ /translation="MSTDNKQSLPAITLAAIGVVYGDIGTSPLYTLRECLSGQFGFGV
+ ERDAVFGFLSLIFWLLIFVVSIKYLTFVMRADNAGEGGILTLMSLAGRNTSARTTSML
+ VIMGLIGGSFFYGEVVITPAISVMSAIEGLEIVAPQLDTWIVPLSIVVLTLLFMIQKH
+ GTGMVGKLFAPIMLTWFLILAVLGLRSIIANPEVLHALNPVWAVRFFLEYKTVSFIAL
+ GAVVLSITGVEALYADMGHFGKFPIRLAWFTVVLPSLVLNYFGQGALLLKHPEAIKNP
+ FFLLAPDWALIPLLILAALATVIASQAVISGVFSLTRQAVRLGYLSPMRIIHTSEMES
+ GQIYIPFVNWLLYFAVVVVIVSFEHSSNLAAAYGIAVTGTMVLTSILSTTVARKNWHW
+ NKYLVALILVAFLCVDIPLFSANLDKLLSGGWLPLSLGLIMFTIMTTWKSERFRLLRR
+ MHEHGNSLEAMIASLEKSPPVRVPGTAVYMSRVLNVIPFALLHNLKHNKVLHERVILL
+ TLRTEDAPYVHNVRRVQIEQLSPTFWRVVASYGWRETPNVEEVFHRCGLEGLSCRMME
+ TSFFMSHESLIVGKRPWYLRLRGKLYLLLQRNALRAPDQFEIPPNRVIELGTQVEI"
+ misc_feature complement(3703723..3705588)
+ /gene="trkD"
+ /locus_tag="SARI_03770"
+ /note="potassium transport protein Kup; Provisional;
+ Region: trkD; PRK10745"
+ /db_xref="CDD:182693"
+ misc_feature complement(3703723..3705555)
+ /gene="trkD"
+ /locus_tag="SARI_03770"
+ /note="potassium uptake protein; Region: kup; TIGR00794"
+ /db_xref="CDD:129876"
+ gene 3705830..3707434
+ /locus_tag="SARI_03771"
+ CDS 3705830..3707434
+ /locus_tag="SARI_03771"
+ /inference="protein motif:HMMPfam:IPR011704"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="similar to AA sequence:REFSEQ:YP_218779.1"
+ /note="'interacts with LdcI, lysine decarboxylase; may be
+ active in late log/ early stationary phase'"
+ /codon_start=1
+ /transl_table=11
+ /product="regulatory ATPase RavA"
+ /protein_id="YP_001572707.1"
+ /db_xref="GI:161505595"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR011704"
+ /translation="MAQRKINSASDDYSPGGETSILAISMIHLTKGRLFIMAHPHLLA
+ ERISRLSSALEKGLYERSHAIRLCLLAALSGESVFLLGPPGIAKSLIARRLKFAFQRA
+ RAFEYLMTRFSTPEEVFGPLSIQALKDEGRYERLTTGYLPEAEIVFLDEIWKAGPAIL
+ NTLLTAINERHFRNGAFEEKIPMRLLVAASNELPEADSSLEALYDRMLIRLWLDKVQD
+ KANFRSMLVSQQDESDNPVPASLQVSDEEYQQWQKDIGAISLPDPVFELIFTLRQQLD
+ NLPNAPYVSDRRWKKAIRLLQASAFFSGRDAIAPIDLILLKDCLWYDAQSLNLMQQQL
+ EILMTGHAWQQQAMLTRLGGIVQRRLQLQQQQSDKTAFTVIKQGGMFSRRPHYTLPPE
+ ASASTLTLLLQKPLKLHDMEVIHITFDRSALELWLTKGGEIRGKLNGIGFAQTLNMEV
+ DNAQHLVVRDISLQGTRLALPEAAEDSMPAEIKQQLEALENDWRQQHTRFSEQQHCLF
+ IHSDWPGRIEASLQDVREQIRQAQQC"
+ misc_feature 3705938..3707431
+ /locus_tag="SARI_03771"
+ /note="regulatory ATPase RavA; Provisional; Region:
+ PRK13531"
+ /db_xref="CDD:184118"
+ misc_feature 3706004..3706462
+ /locus_tag="SARI_03771"
+ /note="The AAA+ (ATPases Associated with a wide variety of
+ cellular Activities) superfamily represents an ancient
+ group of ATPases belonging to the ASCE (for additional
+ strand, catalytic E) division of the P-loop NTPase fold.
+ The ASCE division also includes ABC; Region: AAA; cd00009"
+ /db_xref="CDD:99707"
+ misc_feature 3706073..3706096
+ /locus_tag="SARI_03771"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature order(3706076..3706099,3706277..3706279,3706400..3706402)
+ /locus_tag="SARI_03771"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:99707"
+ misc_feature 3706265..3706282
+ /locus_tag="SARI_03771"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature 3706445..3706447
+ /locus_tag="SARI_03771"
+ /note="arginine finger; other site"
+ /db_xref="CDD:99707"
+ misc_feature 3707264..3707431
+ /locus_tag="SARI_03771"
+ /note="Protein of unknown function (DUF3763); Region:
+ DUF3763; pfam12592"
+ /db_xref="CDD:193091"
+ gene 3707428..3708879
+ /gene="yieM"
+ /locus_tag="SARI_03772"
+ CDS 3707428..3708879
+ /gene="yieM"
+ /locus_tag="SARI_03772"
+ /inference="protein motif:HMMPfam:IPR008912"
+ /inference="protein motif:HMMSmart:IPR002035"
+ /inference="similar to AA sequence:SwissProt:Q8ZKW3"
+ /note="contains a von Willibrand factor type A domain;
+ stimulates the ATPase activity of RavA"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572708.1"
+ /db_xref="GI:161505596"
+ /db_xref="InterPro:IPR002035"
+ /db_xref="InterPro:IPR008912"
+ /translation="MLTLDTLNVMLAVSEEGMVEEMILALLASPQLVIFFEKFPRLKN
+ AVTADLPRWREALRSRLKDARVPQKLTEEVMCYQQSQLLSTPQFIVQLPQILALLHRL
+ HSPYAAQAKQLVESNSTFTPSLHTLFLQRWRLSLVVQATTLNQQLLEEEREQLLSDVQ
+ ERMTLSGQLEPTLAENDNAAGRLWDMSAGQLKRGDYQLIVKYGEFLAAQPELKQLAEQ
+ LGRSREAKSVPKKDAPMETFRTLVREPATVPEQVDGIQQSDDILRLLPPELATLGITE
+ LEYEFYRRLVEKQLLTYRLHGEAWREKVTERPVVHQDVDKQPRGPFIVCVDTSGSMGG
+ FNEQCAKAFCLALMRVALADNRRCFIMLFSTEVVRYELSGPEGIEQAIRFLSQRFRGG
+ TDIASCFRAIIERMQRRKWFDADAVVISDFIAQRLPDDVVSKVGELQRLHQHRFHAVA
+ MSAHGKPGIMRIFDHIWRFDTGMRSRLLRRWRR"
+ misc_feature 3707428..3708846
+ /gene="yieM"
+ /locus_tag="SARI_03772"
+ /note="hypothetical protein; Provisional; Region: yieM;
+ PRK10997"
+ /db_xref="CDD:236815"
+ misc_feature 3708385..3708828
+ /gene="yieM"
+ /locus_tag="SARI_03772"
+ /note="VWA YIEM type: Von Willebrand factor type A (vWA)
+ domain was originally found in the blood coagulation
+ protein von Willebrand factor (vWF). Typically, the vWA
+ domain is made up of approximately 200 amino acid residues
+ folded into a classic a/b...; Region: VWA_YIEM_type;
+ cd01462"
+ /db_xref="CDD:238739"
+ misc_feature order(3708406..3708408,3708412..3708414,3708418..3708420,
+ 3708604..3708606,3708688..3708690)
+ /gene="yieM"
+ /locus_tag="SARI_03772"
+ /note="metal ion-dependent adhesion site (MIDAS); other
+ site"
+ /db_xref="CDD:238739"
+ gene complement(3708884..3709936)
+ /locus_tag="SARI_03773"
+ CDS complement(3708884..3709936)
+ /locus_tag="SARI_03773"
+ /inference="protein motif:BlastProDom:IPR004618"
+ /inference="protein motif:HMMPfam:IPR004618"
+ /inference="protein motif:HMMTigr:IPR004618"
+ /inference="similar to AA sequence:INSD:CAD03118.1"
+ /note="catalyzes the formation of asparagine from
+ aspartate and ammonia"
+ /codon_start=1
+ /transl_table=11
+ /product="asparagine synthetase AsnA"
+ /protein_id="YP_001572709.1"
+ /db_xref="GI:161505597"
+ /db_xref="InterPro:IPR004618"
+ /translation="MNSDLILLLNHRQQDAGVKIMKTAYIAKQRQISFVKSHFSRQLE
+ ERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLG
+ QHDFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVEAI
+ WAGIKATEAEVHKQFGLAPFLPERIHFVHSQDLLSRYPDLDAKGRERAIVKALGAVFL
+ VGIGGTLSDGKRHDVRAPDYDDWSSASELGYAGLNGDILVWNPVLEDAFELSSMGIRV
+ DADTLMRQLQLTGDEDRLQLEWHQALLRGEMPQTIGGGIGQSRLTMLLLQLPHIGQVQ
+ CGVWPAQVRESIPAIL"
+ misc_feature complement(3708902..3709852)
+ /locus_tag="SARI_03773"
+ /note="Asparagine synthetase (aspartate-ammonia ligase)
+ (AsnA) catalyses the conversion of L-aspartate to
+ L-asparagine in the presence of ATP and ammonia. AsnA is
+ a homodimeric enzyme which is structurally similiar to the
+ catalytic core domain of class II...; Region: AsnA;
+ cd00645"
+ /db_xref="CDD:238350"
+ misc_feature complement(order(3708908..3708910,3708926..3708928,
+ 3708938..3708940,3709565..3709567,3709571..3709576,
+ 3709586..3709588,3709625..3709627,3709637..3709639,
+ 3709676..3709678,3709697..3709699,3709703..3709705,
+ 3709709..3709711,3709778..3709783,3709838..3709840,
+ 3709847..3709852))
+ /locus_tag="SARI_03773"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238350"
+ misc_feature complement(order(3708980..3708982,3709112..3709114,
+ 3709124..3709126,3709133..3709135,3709172..3709174,
+ 3709517..3709519,3709523..3709525,3709529..3709531,
+ 3709577..3709579,3709646..3709648,3709655..3709657))
+ /locus_tag="SARI_03773"
+ /note="active site"
+ /db_xref="CDD:238350"
+ gene 3710028..3710486
+ /locus_tag="SARI_03774"
+ CDS 3710028..3710486
+ /locus_tag="SARI_03774"
+ /inference="protein motif:FPrintScan:IPR000485"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000485"
+ /inference="protein motif:HMMSmart:IPR000485"
+ /inference="protein motif:ScanRegExp:IPR000485"
+ /inference="protein motif:superfamily:IPR011008"
+ /inference="similar to AA sequence:INSD:AAV79507.1"
+ /note="transcriptional repressor of asnA which codes for
+ aspartate-ammonia ligase"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional regulator AsnC"
+ /protein_id="YP_001572710.1"
+ /db_xref="GI:161505598"
+ /db_xref="InterPro:IPR000485"
+ /db_xref="InterPro:IPR011008"
+ /db_xref="InterPro:IPR011991"
+ /translation="MENYQIDNLDRGILDALMENARTAYAELAKQFGVSPGTIHVRVE
+ KMKQAGIITGARIDVSPKQLGYDVGCFIGIILKSAKDYPSALARLESLDEVTEAYYTT
+ GHYSIFIKVMCKSIDALQHVLINKIQTIDEIQSTETLIVLQNPIMRTIRP"
+ misc_feature 3710028..3710483
+ /locus_tag="SARI_03774"
+ /note="DNA-binding transcriptional regulator AsnC;
+ Provisional; Region: PRK11179"
+ /db_xref="CDD:183019"
+ misc_feature 3710046..>3710195
+ /locus_tag="SARI_03774"
+ /note="Arsenical Resistance Operon Repressor and similar
+ prokaryotic, metal regulated homodimeric repressors. ARSR
+ subfamily of helix-turn-helix bacterial transcription
+ regulatory proteins (winged helix topology). Includes
+ several proteins that appear to...; Region: HTH_ARSR;
+ cd00090"
+ /db_xref="CDD:238042"
+ misc_feature order(3710049..3710057,3710094..3710099,3710103..3710105,
+ 3710130..3710141,3710145..3710150,3710157..3710162,
+ 3710166..3710171,3710187..3710195)
+ /locus_tag="SARI_03774"
+ /note="putative DNA binding site [nucleotide binding];
+ other site"
+ /db_xref="CDD:238042"
+ misc_feature order(3710094..3710096,3710106..3710108)
+ /locus_tag="SARI_03774"
+ /note="putative Zn2+ binding site [ion binding]; other
+ site"
+ /db_xref="CDD:238042"
+ misc_feature 3710241..3710456
+ /locus_tag="SARI_03774"
+ /note="AsnC family; Region: AsnC_trans_reg; pfam01037"
+ /db_xref="CDD:216258"
+ gene 3710575..3711018
+ /locus_tag="SARI_03775"
+ CDS 3710575..3711018
+ /locus_tag="SARI_03775"
+ /inference="protein motif:HMMPfam:IPR008254"
+ /inference="similar to AA sequence:INSD:AAX67694.1"
+ /note="'An electron-transfer protein; flavodoxin binds one
+ FMN molecule, which serves as a redox-active prosthetic
+ group'"
+ /codon_start=1
+ /transl_table=11
+ /product="flavodoxin"
+ /protein_id="YP_001572711.1"
+ /db_xref="GI:161505599"
+ /db_xref="InterPro:IPR008254"
+ /translation="MADITLISGSTLGGAEYVAEHLAEKLEAAGFSTETLHGPRLEDL
+ STSGSWLIISSTHGAGDIPDNLLPFYKDLQSQKTNLSAVRFGAIGIGSREYDTFCGAI
+ KKIEAELKGAGAKQLGETLKINILEHDIPEDPAEIWLDSWINLLK"
+ misc_feature 3710575..3711012
+ /locus_tag="SARI_03775"
+ /note="FMN-binding protein MioC; Provisional; Region:
+ PRK09004"
+ /db_xref="CDD:181608"
+ gene 3711396..3713285
+ /locus_tag="SARI_03776"
+ CDS 3711396..3713285
+ /locus_tag="SARI_03776"
+ /inference="protein motif:BlastProDom:IPR002218"
+ /inference="protein motif:HMMPanther:IPR002218"
+ /inference="protein motif:HMMPfam:IPR002218"
+ /inference="protein motif:HMMTigr:IPR004416"
+ /inference="protein motif:ScanRegExp:IPR002218"
+ /note="GidA; glucose-inhibited cell division protein A;
+ involved in the 5-carboxymethylaminomethyl modification
+ (mnm(5)s(2)U) of the wobble uridine base in some tRNAs"
+ /codon_start=1
+ /transl_table=11
+ /product="tRNA uridine 5-carboxymethylaminomethyl
+ modification enzyme GidA"
+ /protein_id="YP_001572712.1"
+ /db_xref="GI:161505600"
+ /db_xref="InterPro:IPR002218"
+ /db_xref="InterPro:IPR004416"
+ /translation="MFYPDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQ
+ MSCNPAIGGIGKGHLVKEVDALGGLMAAAIDRAGIQFRILNASKGPAVRATRAQADRV
+ LYRQAVRTALENQPNLMLFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLD
+ GKIHIGLDNYSGGRAGDPPSIPLSRRLRELPLRVSRLKTGTPPRIDARTIDFSVLAQQ
+ HGDNPMPVFSFMGNASQHPQQVPCYITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRY
+ CPSIEDKVMRFSDRNQHQIFLEPEGLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENA
+ KIVRPGYAIEYDFFDPRDLKPTLESKFIQGLFFAGQINGTTGYEEAAAQGLLAGLNAA
+ RLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPYRMFTSRAEYRLMLREDNADLRLTE
+ IGRDLGLVDDERWARFNEKLENIERERQRLKSTWVTPSAEFAADVNAHLTTPLSREAS
+ GEDLLRRPEMTYAQLTSLSAFAPALEDEQAAEQVEIQVKYEGYIARQQDEIEKQLRNE
+ NTLLPATLDYRLVSGLSNEVIAKLNDHKPASIGQASRISGVTPAAISILLVWLKKQGM
+ LRRSA"
+ misc_feature 3711402..3713279
+ /locus_tag="SARI_03776"
+ /note="tRNA uridine 5-carboxymethylaminomethyl
+ modification enzyme GidA; Validated; Region: PRK05192"
+ /db_xref="CDD:235362"
+ misc_feature <3712326..>3712532
+ /locus_tag="SARI_03776"
+ /note="NAD(FAD)-utilizing enzyme possibly involved in
+ translation [Translation, ribosomal structure and
+ biogenesis]; Region: Gid; COG1206"
+ /db_xref="CDD:224127"
+ misc_feature 3713031..3713246
+ /locus_tag="SARI_03776"
+ /note="GidA associated domain 3; Region: GIDA_assoc_3;
+ pfam13932"
+ /db_xref="CDD:206103"
+ unsure 3712641..3712667
+ /locus_tag="SARI_03776"
+ /note="Sequence derived from one plasmid subclone"
+ gene 3713386..3714009
+ /gene="gidB"
+ /locus_tag="SARI_03777"
+ CDS 3713386..3714009
+ /gene="gidB"
+ /locus_tag="SARI_03777"
+ /inference="protein motif:BlastProDom:IPR003682"
+ /inference="protein motif:HMMPfam:IPR003682"
+ /inference="protein motif:HMMTigr:IPR003682"
+ /inference="similar to AA sequence:REFSEQ:NP_462772.2"
+ /note="glucose-inhibited division protein B; SAM-dependent
+ methyltransferase; methylates the N7 position of guanosine
+ in position 527 of 16S rRNA"
+ /codon_start=1
+ /transl_table=11
+ /product="16S rRNA methyltransferase GidB"
+ /protein_id="YP_001572713.1"
+ /db_xref="GI:161505601"
+ /db_xref="InterPro:IPR003682"
+ /translation="MLNKLSRLLDEAGISLTDHQKNHLVAYVGMLDKWNKAYNLTSVR
+ DPAEMIVRHILDSIVVAPYLQGQRFIDVGTGPGLPGIPLAIVLPDAHFTLLDSLGKRV
+ RFLRQVQHELKLENITPVQSRVEAYPSEPPFDGVISRAFASLSDMVSWCRHLPGDKGR
+ FYALKGQLPEDEIASLPNNFSVESVEKLRVPQLEGERHLVIIKSNKV"
+ misc_feature 3713386..3714006
+ /gene="gidB"
+ /locus_tag="SARI_03777"
+ /note="Predicted S-adenosylmethionine-dependent
+ methyltransferase involved in bacterial cell division
+ [Cell envelope biogenesis, outer membrane]; Region: GidB;
+ COG0357"
+ /db_xref="CDD:223434"
+ misc_feature 3713587..3713871
+ /gene="gidB"
+ /locus_tag="SARI_03777"
+ /note="S-adenosylmethionine-dependent methyltransferases
+ (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
+ that use S-adenosyl-L-methionine (SAM or AdoMet) as a
+ substrate for methyltransfer, creating the product
+ S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
+ cd02440"
+ /db_xref="CDD:100107"
+ misc_feature order(3713599..3713619,3713671..3713676,3713749..3713757,
+ 3713800..3713802)
+ /gene="gidB"
+ /locus_tag="SARI_03777"
+ /note="S-adenosylmethionine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:100107"
+ gene 3714083..3714259
+ /locus_tag="SARI_03778"
+ CDS 3714083..3714259
+ /locus_tag="SARI_03778"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572714.1"
+ /db_xref="GI:161505602"
+ /translation="MLHLTRNLRFRFNITTLLLLLKQRVINFVNISLLKIESKNHFCL
+ LNFYYKCQWGVFGV"
+ gene 3714625..3715005
+ /locus_tag="SARI_03779"
+ CDS 3714625..3715005
+ /locus_tag="SARI_03779"
+ /inference="protein motif:HMMPfam:IPR005598"
+ /inference="similar to AA sequence:REFSEQ:YP_152815.1"
+ /note="Produces ATP from ADP in the presence of a proton
+ gradient across the membrane. Subunit I associates with
+ the membrane and may be involved with cation
+ translocation"
+ /codon_start=1
+ /transl_table=11
+ /product="F0F1 ATP synthase subunit I"
+ /protein_id="YP_001572715.1"
+ /db_xref="GI:161505603"
+ /db_xref="InterPro:IPR005598"
+ /translation="MSVSLVSRNVARKLLFIQFLAVIASGLLFCLKDPFWGISALCGG
+ LAVALPNMLFMIFAWRHQAHTPAKGRVSWTFAFGEAFKVLAMLVLLVVALAVLKAVFL
+ PLIVTWVLVLVIQILAPAVINNKG"
+ misc_feature 3714625..3714996
+ /locus_tag="SARI_03779"
+ /note="F0F1 ATP synthase subunit I; Validated; Region:
+ PRK08049"
+ /db_xref="CDD:181208"
+ gene 3715014..3715829
+ /locus_tag="SARI_03780"
+ CDS 3715014..3715829
+ /locus_tag="SARI_03780"
+ /inference="protein motif:Gene3D:IPR000568"
+ /inference="protein motif:HMMPanther:IPR000568"
+ /inference="protein motif:HMMPfam:IPR000568"
+ /inference="protein motif:HMMTigr:IPR000568"
+ /inference="protein motif:ScanRegExp:IPR000568"
+ /inference="protein motif:superfamily:IPR000568"
+ /inference="similar to AA sequence:INSD:AAV79502.1"
+ /note="Produces ATP from ADP in the presence of a proton
+ gradient across the membrane. Subunit A is part of the
+ membrane proton channel F0"
+ /codon_start=1
+ /transl_table=11
+ /product="F0F1 ATP synthase subunit A"
+ /protein_id="YP_001572716.1"
+ /db_xref="GI:161505604"
+ /db_xref="InterPro:IPR000568"
+ /translation="MASENMTPQDYIGHHLNNLQMDLRTFSLVDPHNPPATFWTLNID
+ SMFFSVVLGLLFLVMFRSVAKKATSGVPGKFQTAIELIVGFVHGSVKDMYHGKSKLIA
+ PLALTIFVWVFLMNLMDLLPIDLLPYIAEHWLGLPATRVVPSADVNITLSMALGVFIL
+ ILFYSIKMKGIGGFAKELTLQPFNHWAFIPVNLILEGVSLLSKPVSLGLRLFGNMYAG
+ ELIFILIAGLLPWWSQWILNVPWAIFHILIITLQAFIFMVLTIVYLSMASEEH"
+ misc_feature 3715020..3715826
+ /locus_tag="SARI_03780"
+ /note="F0F1-type ATP synthase, subunit a [Energy
+ production and conversion]; Region: AtpB; COG0356"
+ /db_xref="CDD:223433"
+ misc_feature 3715107..3715826
+ /locus_tag="SARI_03780"
+ /note="F0F1 ATP synthase subunit A; Validated; Region:
+ PRK05815"
+ /db_xref="CDD:235617"
+ gene 3715876..3716115
+ /locus_tag="SARI_03781"
+ CDS 3715876..3716115
+ /locus_tag="SARI_03781"
+ /inference="protein motif:FPrintScan:IPR000454"
+ /inference="protein motif:Gene3D:IPR002379"
+ /inference="protein motif:HMMPfam:IPR002379"
+ /inference="protein motif:HMMTigr:IPR005953"
+ /inference="protein motif:ScanRegExp:IPR000454"
+ /inference="protein motif:superfamily:IPR002379"
+ /inference="similar to AA sequence:INSD:ABE09719.1"
+ /note="Produces ATP from ADP in the presence of a proton
+ gradient across the membrane. Subunit C is part of the
+ membrane proton channel F0"
+ /codon_start=1
+ /transl_table=11
+ /product="F0F1 ATP synthase subunit C"
+ /protein_id="YP_001572717.1"
+ /db_xref="GI:161505605"
+ /db_xref="InterPro:IPR000454"
+ /db_xref="InterPro:IPR002379"
+ /db_xref="InterPro:IPR005953"
+ /translation="MENLNMDLLYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQPD
+ LIPLLRTQFFIVMGLVDAIPMIAVGLGLYVMFAVA"
+ misc_feature <3715975..3716112
+ /locus_tag="SARI_03781"
+ /note="F0F1 ATP synthase subunit C; Validated; Region:
+ PRK06876"
+ /db_xref="CDD:180739"
+ gene 3716175..3716645
+ /locus_tag="SARI_03782"
+ CDS 3716175..3716645
+ /locus_tag="SARI_03782"
+ /inference="protein motif:HMMPfam:IPR002146"
+ /inference="protein motif:HMMTigr:IPR005864"
+ /inference="similar to AA sequence:INSD:AAV79500.1"
+ /note="Produces ATP from ADP in the presence of a proton
+ gradient across the membrane. Subunit B is part of the
+ membrane proton channel."
+ /codon_start=1
+ /transl_table=11
+ /product="F0F1 ATP synthase subunit B"
+ /protein_id="YP_001572718.1"
+ /db_xref="GI:161505606"
+ /db_xref="InterPro:IPR002146"
+ /db_xref="InterPro:IPR005864"
+ /translation="MNLNATILGQAIAFILFVWFCMKYVWPPLMAAIEKRQKEIADGL
+ ASAERAHKDLDLAKASATDQLKKAKAEAQVIIEQANKRRAQILDEAKTEAEQERTKIV
+ AQAQAEIEAERKRAREELRKQVAILAVAGAEKIIERSVDEAANSDIVDKLVAEL"
+ misc_feature 3716175..3716642
+ /locus_tag="SARI_03782"
+ /note="F0F1 ATP synthase subunit B; Validated; Region:
+ PRK05759"
+ /db_xref="CDD:180240"
+ misc_feature 3716181..3716642
+ /locus_tag="SARI_03782"
+ /note="F0F1-type ATP synthase, subunit b [Energy
+ production and conversion]; Region: AtpF; COG0711"
+ /db_xref="CDD:223783"
+ gene 3716660..3717193
+ /locus_tag="SARI_03783"
+ CDS 3716660..3717193
+ /locus_tag="SARI_03783"
+ /inference="protein motif:FPrintScan:IPR000711"
+ /inference="protein motif:Gene3D:IPR000711"
+ /inference="protein motif:HMMPanther:IPR000711"
+ /inference="protein motif:HMMPfam:IPR000711"
+ /inference="protein motif:HMMTigr:IPR000711"
+ /inference="protein motif:ScanRegExp:IPR000711"
+ /inference="protein motif:superfamily:IPR000711"
+ /inference="similar to AA sequence:INSD:AAV79499.1"
+ /note="Produces ATP from ADP in the presence of a proton
+ gradient across the membrane; the delta subunit is part of
+ the catalytic core of the ATP synthase complex"
+ /codon_start=1
+ /transl_table=11
+ /product="F0F1 ATP synthase subunit delta"
+ /protein_id="YP_001572719.1"
+ /db_xref="GI:161505607"
+ /db_xref="InterPro:IPR000711"
+ /translation="MSEFVTVARPYAKAAFDFAVEHQSVDRWQDMLAFAAEVTKNEQM
+ AELLSGALAPETLAESFIAVCGEQLDEHGQNLIRVMAENNRLNALPDVLEQFIHLRAA
+ SEATSEVEVTSATALSEEQLSKISAAMEKRLSRKVKLNCKIDKSVMAGVIIRAGDMVI
+ DGSVRGRLERLADVLQS"
+ misc_feature 3716660..3717190
+ /locus_tag="SARI_03783"
+ /note="F0F1 ATP synthase subunit delta; Validated; Region:
+ PRK05758"
+ /db_xref="CDD:235593"
+ misc_feature 3716678..3717184
+ /locus_tag="SARI_03783"
+ /note="ATP synthase delta (OSCP) subunit; Region: OSCP;
+ pfam00213"
+ /db_xref="CDD:215793"
+ gene 3717206..3718747
+ /locus_tag="SARI_03784"
+ CDS 3717206..3718747
+ /locus_tag="SARI_03784"
+ /inference="protein motif:HMMPanther:IPR005294"
+ /inference="protein motif:HMMPfam:IPR000194"
+ /inference="protein motif:HMMPfam:IPR000793"
+ /inference="protein motif:HMMPfam:IPR004100"
+ /inference="protein motif:HMMTigr:IPR005294"
+ /inference="protein motif:ScanRegExp:IPR000194"
+ /inference="protein motif:superfamily:IPR000793"
+ /inference="protein motif:superfamily:IPR004100"
+ /inference="similar to AA sequence:INSD:AAL22725.1"
+ /note="produces ATP from ADP in the presence of a proton
+ gradient across the membrane; the alpha chain is a
+ catalytic subunit"
+ /codon_start=1
+ /transl_table=11
+ /product="F0F1 ATP synthase subunit alpha"
+ /protein_id="YP_001572720.1"
+ /db_xref="GI:161505608"
+ /db_xref="InterPro:IPR000194"
+ /db_xref="InterPro:IPR000793"
+ /db_xref="InterPro:IPR004100"
+ /db_xref="InterPro:IPR005294"
+ /translation="MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGL
+ ADCMQGEMISLPGNRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRG
+ LLGRVVNTLGAPIDGKGPVDNDGFSAVEAIAPGVIDRQSVDQPVQTGYKAVDSMIPIG
+ RGQRELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGAL
+ ANTIVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLL
+ LRRPPGREAFPGDVFYLHSRLLERAARVNADYVEAYTKGEVKGKTGSLTALPIIETQA
+ GDVSAFVPTNVISITDGQIFLESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGG
+ IRTALAQYRELAAFSQFASDLDDATRKQLDHGQKVTELLKQKQYAPMSVAQQSLVLFA
+ AERGYLADVELAKIGSFEAALLAYVDRDHAPLMQEINQSGGYNDEIEGKLKGILDSFK
+ ATQSW"
+ misc_feature 3717206..3718735
+ /locus_tag="SARI_03784"
+ /note="F0F1 ATP synthase subunit alpha; Validated; Region:
+ PRK09281"
+ /db_xref="CDD:236448"
+ misc_feature 3717290..3717481
+ /locus_tag="SARI_03784"
+ /note="ATP synthase alpha/beta family, beta-barrel domain;
+ Region: ATP-synt_ab_N; pfam02874"
+ /db_xref="CDD:217261"
+ misc_feature 3717545..3718339
+ /locus_tag="SARI_03784"
+ /note="F1 ATP synthase alpha, central domain. The F-ATPase
+ is found in bacterial plasma membranes, mitochondrial
+ inner membranes and in chloroplast thylakoid membranes. It
+ has also been found in the archaea Methanosarcina barkeri.
+ It uses a proton gradient to...; Region: F1_ATPase_alpha;
+ cd01132"
+ /db_xref="CDD:238552"
+ misc_feature order(3717548..3717553,3717599..3717604,3717608..3717613,
+ 3717620..3717622,3717626..3717628,3717716..3717721,
+ 3717806..3717817,3717821..3717826,3717833..3717835,
+ 3718016..3718021,3718037..3718045,3718049..3718054,
+ 3718067..3718069,3718079..3718081,3718088..3718090,
+ 3718100..3718102,3718244..3718246,3718253..3718255,
+ 3718286..3718291,3718298..3718300,3718331..3718333)
+ /locus_tag="SARI_03784"
+ /note="beta subunit interaction interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:238552"
+ misc_feature 3717710..3717733
+ /locus_tag="SARI_03784"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:238552"
+ misc_feature order(3717716..3717718,3717728..3717736,3717788..3717790,
+ 3717803..3717805,3717986..3717991,3717998..3718000,
+ 3718196..3718198,3718244..3718246,3718283..3718285,
+ 3718298..3718303,3718331..3718333)
+ /locus_tag="SARI_03784"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238552"
+ misc_feature 3717974..3717988
+ /locus_tag="SARI_03784"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:238552"
+ misc_feature 3718364..3718609
+ /locus_tag="SARI_03784"
+ /note="ATP synthase alpha/beta chain, C terminal domain;
+ Region: ATP-synt_ab_C; pfam00306"
+ /db_xref="CDD:215848"
+ gene 3718798..3719661
+ /locus_tag="SARI_03785"
+ CDS 3718798..3719661
+ /locus_tag="SARI_03785"
+ /inference="protein motif:HMMPanther:IPR000131"
+ /inference="protein motif:HMMPfam:IPR000131"
+ /inference="protein motif:HMMTigr:IPR000131"
+ /inference="protein motif:ScanRegExp:IPR000131"
+ /inference="protein motif:superfamily:IPR000131"
+ /inference="similar to AA sequence:SwissProt:Q57HX8"
+ /note="Produces ATP from ADP in the presence of a proton
+ gradient across the membrane. The gamma chain is a
+ regulatory subunit"
+ /codon_start=1
+ /transl_table=11
+ /product="F0F1 ATP synthase subunit gamma"
+ /protein_id="YP_001572721.1"
+ /db_xref="GI:161505609"
+ /db_xref="InterPro:IPR000131"
+ /translation="MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRP
+ YAETMRKVIGHLANGNLEYKHPYLEERDVKRVGYLVVSTDRGLCGGLNINLFKKLLAE
+ MKAWSDKGVQCELAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAY
+ DEGRLDKLYIVSNKFINTMSQVPTITQLLPLPASEDDDLKRKAWDYLYEPDPKALLDT
+ LLRRYVESQVYQGVVENLASEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQE
+ LTEIVSGAAAV"
+ misc_feature 3718801..3719649
+ /locus_tag="SARI_03785"
+ /note="mitochondrial ATP synthase gamma subunit; Region:
+ F1-ATPase_gamma; cd12151"
+ /db_xref="CDD:213394"
+ misc_feature order(3718810..3718812,3718825..3718827,3718843..3718845,
+ 3718855..3718857,3718864..3718869,3718873..3718878,
+ 3718885..3718890,3719050..3719052,3719056..3719067,
+ 3719155..3719160,3719167..3719172,3719179..3719181,
+ 3719545..3719547,3719554..3719559,3719566..3719568,
+ 3719584..3719586,3719593..3719598,3719602..3719607,
+ 3719614..3719619,3719626..3719628,3719632..3719649)
+ /locus_tag="SARI_03785"
+ /note="core domain interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:213394"
+ misc_feature order(3718918..3718923,3718927..3718932,3718939..3718941,
+ 3718948..3718953,3719440..3719442,3719449..3719454,
+ 3719461..3719463)
+ /locus_tag="SARI_03785"
+ /note="delta subunit interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:213394"
+ misc_feature order(3719164..3719166,3719197..3719214,3719449..3719451,
+ 3719458..3719463)
+ /locus_tag="SARI_03785"
+ /note="epsilon subunit interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:213394"
+ gene 3719688..3721070
+ /locus_tag="SARI_03786"
+ CDS 3719688..3721070
+ /locus_tag="SARI_03786"
+ /inference="protein motif:HMMPfam:IPR000194"
+ /inference="protein motif:HMMPfam:IPR000793"
+ /inference="protein motif:HMMPfam:IPR004100"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR005722"
+ /inference="protein motif:ScanRegExp:IPR000194"
+ /inference="protein motif:superfamily:IPR004100"
+ /inference="similar to AA sequence:INSD:AAL22723.1"
+ /note="Produces ATP from ADP in the presence of a proton
+ gradient across the membrane. The beta chain is a
+ regulatory subunit"
+ /codon_start=1
+ /transl_table=11
+ /product="F0F1 ATP synthase subunit beta"
+ /protein_id="YP_001572722.1"
+ /db_xref="GI:161505610"
+ /db_xref="InterPro:IPR000194"
+ /db_xref="InterPro:IPR000793"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR004100"
+ /db_xref="InterPro:IPR005722"
+ /translation="MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNEKLVLEVQ
+ QQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEI
+ GEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNM
+ MELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRL
+ RVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEM
+ GVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPA
+ VDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILGMDELSEEDKLVVA
+ RARKIQRFLSQPFFVAEVFTGSPGKYVSLKDTIRGFKGIMEGEYDHLPEQAFYMVGSI
+ DEAVEKAKKL"
+ misc_feature 3719688..3721067
+ /locus_tag="SARI_03786"
+ /note="F0F1 ATP synthase subunit beta; Validated; Region:
+ PRK09280"
+ /db_xref="CDD:236447"
+ misc_feature 3719703..3719903
+ /locus_tag="SARI_03786"
+ /note="ATP synthase alpha/beta family, beta-barrel domain;
+ Region: ATP-synt_ab_N; pfam02874"
+ /db_xref="CDD:217261"
+ misc_feature 3719910..3720728
+ /locus_tag="SARI_03786"
+ /note="F1 ATP synthase beta subunit, nucleotide-binding
+ domain. The F-ATPase is found in bacterial plasma
+ membranes, mitochondrial inner membranes and in
+ chloroplast thylakoid membranes. It has also been found in
+ the archaea Methanosarcina barkeri. It uses a...; Region:
+ F1-ATPase_beta; cd01133"
+ /db_xref="CDD:238553"
+ misc_feature order(3719979..3719981,3720030..3720032,3720036..3720041,
+ 3720045..3720047,3720051..3720053,3720234..3720242,
+ 3720249..3720251,3720315..3720323,3720336..3720338,
+ 3720426..3720428,3720435..3720437,3720447..3720449,
+ 3720465..3720473,3720477..3720482,3720495..3720497,
+ 3720507..3720509,3720528..3720530,3720579..3720581,
+ 3720588..3720593,3720603..3720605,3720624..3720626,
+ 3720630..3720638,3720669..3720674,3720699..3720704,
+ 3720708..3720710,3720714..3720716)
+ /locus_tag="SARI_03786"
+ /note="alpha subunit interaction interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:238553"
+ misc_feature 3720138..3720158
+ /locus_tag="SARI_03786"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:238553"
+ misc_feature order(3720144..3720146,3720153..3720161,3720231..3720236,
+ 3720243..3720245,3720414..3720416,3720426..3720428,
+ 3720678..3720683)
+ /locus_tag="SARI_03786"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238553"
+ misc_feature 3720402..3720416
+ /locus_tag="SARI_03786"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:238553"
+ misc_feature order(3720672..3720674,3720678..3720680,3720696..3720701)
+ /locus_tag="SARI_03786"
+ /note="inhibitor binding site; inhibition site"
+ /db_xref="CDD:238553"
+ misc_feature 3720750..3721067
+ /locus_tag="SARI_03786"
+ /note="ATP synthase alpha/beta chain, C terminal domain;
+ Region: ATP-synt_ab_C; pfam00306"
+ /db_xref="CDD:215848"
+ gene 3721091..3721510
+ /gene="atpC"
+ /locus_tag="SARI_03787"
+ CDS 3721091..3721510
+ /gene="atpC"
+ /locus_tag="SARI_03787"
+ /inference="protein motif:BlastProDom:IPR001469"
+ /inference="protein motif:Gene3D:IPR001469"
+ /inference="protein motif:HMMPanther:IPR001469"
+ /inference="protein motif:HMMPfam:IPR001469"
+ /inference="protein motif:HMMTigr:IPR001469"
+ /inference="protein motif:superfamily:IPR001469"
+ /inference="similar to AA sequence:SwissProt:Q57HY0"
+ /note="part of catalytic core of ATP synthase;
+ alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in
+ producing ATP from ADP in the presence of the proton
+ motive force across the membrane"
+ /codon_start=1
+ /transl_table=11
+ /product="F0F1 ATP synthase subunit epsilon"
+ /protein_id="YP_001572724.1"
+ /db_xref="GI:161505611"
+ /db_xref="InterPro:IPR001469"
+ /translation="MAMTYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLT
+ AIKPGMIRIVKQHGHEEFIYLSGGILEVQPGTVTVLADTAIRGQDLDEARALEAKRKA
+ EEHIKSSHGDVDYAQASAELAKAIAKLRVIELTKKAM"
+ misc_feature 3721094..3721498
+ /gene="atpC"
+ /locus_tag="SARI_03787"
+ /note="F0F1 ATP synthase subunit epsilon; Validated;
+ Region: atpC; PRK00571"
+ /db_xref="CDD:234796"
+ misc_feature 3721106..3721471
+ /gene="atpC"
+ /locus_tag="SARI_03787"
+ /note="mitochondrial ATP synthase delta subunit; Region:
+ F1-ATPase_delta; cd12152"
+ /db_xref="CDD:213395"
+ misc_feature order(3721112..3721114,3721121..3721129,3721133..3721135,
+ 3721142..3721144,3721208..3721222,3721289..3721306,
+ 3721322..3721324,3721328..3721336)
+ /gene="atpC"
+ /locus_tag="SARI_03787"
+ /note="gamma subunit interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:213395"
+ misc_feature order(3721127..3721129,3721175..3721177,3721223..3721228,
+ 3721232..3721234,3721280..3721282,3721286..3721294,
+ 3721334..3721339,3721343..3721345,3721352..3721357,
+ 3721361..3721363,3721382..3721384,3721436..3721441,
+ 3721445..3721450,3721457..3721459,3721463..3721465)
+ /gene="atpC"
+ /locus_tag="SARI_03787"
+ /note="epsilon subunit interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:213395"
+ misc_feature order(3721157..3721159,3721163..3721165,3721181..3721186,
+ 3721190..3721192,3721196..3721198,3721202..3721210,
+ 3721250..3721252)
+ /gene="atpC"
+ /locus_tag="SARI_03787"
+ /note="LBP interface [polypeptide binding]; other site"
+ /db_xref="CDD:213395"
+ gene 3721821..3723188
+ /gene="glmU"
+ /locus_tag="SARI_03789"
+ CDS 3721821..3723188
+ /gene="glmU"
+ /locus_tag="SARI_03789"
+ /inference="protein motif:BlastProDom:IPR001986"
+ /inference="protein motif:HMMPfam:IPR001228"
+ /inference="protein motif:HMMTigr:IPR005882"
+ /inference="protein motif:ScanRegExp:IPR001451"
+ /inference="protein motif:superfamily:IPR011004"
+ /inference="similar to AA sequence:REFSEQ:NP_462761.1"
+ /note="forms a homotrimer; catalyzes the acetylation of
+ glucosamine-1-phosphate and uridylation of
+ N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc;
+ function in cell wall synthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="bifunctional N-acetylglucosamine-1-phosphate
+ uridyltransferase/glucosamine-1-phosphate
+ acetyltransferase"
+ /protein_id="YP_001572725.1"
+ /db_xref="GI:161505613"
+ /db_xref="InterPro:IPR001228"
+ /db_xref="InterPro:IPR001451"
+ /db_xref="InterPro:IPR001986"
+ /db_xref="InterPro:IPR005882"
+ /db_xref="InterPro:IPR011004"
+ /translation="MLNSAMSVVILAAGKGTRMYSDIPKVLHTLAGKAMVQHVIDAAN
+ ELGASQVHLVYGHGGDLLKQTLKNDNLNWVLQAEQLGTGHAMQQAAPFFGDDENILML
+ YGDVPLISVETLQRLRDAKPQGGIGLLTVKLDDPSGYGRITRVNGKVTGIVEHKDATD
+ EQRQIKEINTGILIANGADMKRWLSKLTNNNAQGEYYITDIIALAYQEGREIAAVHPA
+ RISETEGVNNRLQLSRLERIYQAEQAEKLLLAGVMLRDPARFDLRGNLAHGRDVEIDT
+ NVIIEGNVTLGHRVKIGTGCIIKNSVIGDDCEISPYSVVEDARLDPACTIGPFARLRP
+ GAELLAGAHVGNFVEMKKARLGKGSKAGHLTYLGDADIGDNVNIGAGTITCNYDGANK
+ FKTIIGDDVFVGSDTQLVAPVTVGKGATIAAGTTVTRNVADNELVLSRVPQVHKQGWQ
+ RPVKK"
+ misc_feature 3721821..3723185
+ /gene="glmU"
+ /locus_tag="SARI_03789"
+ /note="bifunctional N-acetylglucosamine-1-phosphate
+ uridyltransferase/glucosamine-1-phosphate
+ acetyltransferase; Provisional; Region: glmU; PRK09451"
+ /db_xref="CDD:181867"
+ misc_feature 3721842..3722516
+ /gene="glmU"
+ /locus_tag="SARI_03789"
+ /note="N-terminal domain of bacterial GlmU; Region:
+ GT2_GlmU_N_bac; cd02540"
+ /db_xref="CDD:133020"
+ misc_feature order(3721851..3721859,3721980..3721982,3722064..3722066,
+ 3722073..3722075,3722127..3722129,3722133..3722135)
+ /gene="glmU"
+ /locus_tag="SARI_03789"
+ /note="Substrate binding site; other site"
+ /db_xref="CDD:133020"
+ misc_feature order(3722133..3722135,3722499..3722501)
+ /gene="glmU"
+ /locus_tag="SARI_03789"
+ /note="Mg++ binding site; other site"
+ /db_xref="CDD:133020"
+ misc_feature 3722571..3723149
+ /gene="glmU"
+ /locus_tag="SARI_03789"
+ /note="N-acetyl-glucosamine-1-phosphate uridyltransferase
+ (GlmU), C-terminal left-handed beta-helix (LbH)
+ acetyltransferase domain: GlmU is also known as
+ UDP-N-acetylglucosamine pyrophosphorylase. It is a
+ bifunctional bacterial enzyme that catalyzes two...;
+ Region: LbH_GlmU_C; cd03353"
+ /db_xref="CDD:100044"
+ misc_feature order(3722817..3722819,3722865..3722867,3722871..3722873,
+ 3722907..3722909,3722916..3722918,3722949..3722960,
+ 3722973..3722981,3722994..3722996,3723024..3723026,
+ 3723030..3723035,3723084..3723089,3723138..3723140)
+ /gene="glmU"
+ /locus_tag="SARI_03789"
+ /note="active site"
+ /db_xref="CDD:100044"
+ misc_feature order(3722817..3722819,3722865..3722867,3722871..3722873,
+ 3722907..3722909,3722916..3722918,3722949..3722957,
+ 3722976..3722978,3722994..3722996)
+ /gene="glmU"
+ /locus_tag="SARI_03789"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:100044"
+ misc_feature order(3722958..3722960,3722973..3722975,3722979..3722981,
+ 3723030..3723035,3723084..3723089,3723138..3723140)
+ /gene="glmU"
+ /locus_tag="SARI_03789"
+ /note="CoA binding site [chemical binding]; other site"
+ /db_xref="CDD:100044"
+ gene 3723487..3725316
+ /locus_tag="SARI_03790"
+ CDS 3723487..3725316
+ /locus_tag="SARI_03790"
+ /inference="protein motif:HMMPfam:IPR000583"
+ /inference="protein motif:HMMPfam:IPR001347"
+ /inference="protein motif:HMMTigr:IPR005855"
+ /inference="protein motif:ScanRegExp:IPR000583"
+ /note="'Catalyzes the first step in hexosamine metabolism,
+ converting fructose-6P into glucosamine-6P using glutamine
+ as a nitrogen source'"
+ /codon_start=1
+ /transl_table=11
+ /product="glucosamine--fructose-6-phosphate
+ aminotransferase"
+ /protein_id="YP_001572726.1"
+ /db_xref="GI:161505614"
+ /db_xref="InterPro:IPR000583"
+ /db_xref="InterPro:IPR001347"
+ /db_xref="InterPro:IPR005855"
+ /translation="MCGIVGAIAQRDVAEILLEGLRRLEYRGYDSAGLAVVDAKGHMT
+ RLRRLGKVQMLSQAAEEHPLHGGTGIAHTRWATHGEPSEANAHPHVSEHIVVVHNGII
+ ENHEPLREALKARGYTFFSETDTEVIAHLVHWEMEQGGTLREAVLRAIPQLRGAYGTV
+ IMDTRHPDTLLAARSGSPLVIGLGMGENFIASDQLALLPVTRRFIFLEEGDIAEVTRR
+ SVAIFDKTGAEVKRQDIESSLQYDAGDKGIYRHYMQKEIYEQPNAIKNTLTGRISHGE
+ VDLSELGPEANELLSQVEHIQIIACGTSYNSGMVSRYWFEALAGIPCDVEIASEFRYR
+ KSAVRRNSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLAMMT
+ NAGTEIGVASTKAFTTQLTVLLMLVAKLARLKGQDASIEHDIVHGLQALPSRIEQMLS
+ QDKRIEALAEDFSDKHHALFLGRGDQYPIALEGALKLKEISYIHAEAYAAGELKHGPL
+ ALIDADMPVIVVAPNNELLEKLKSNIEEVRARGGQLYVFADQDAGFVSSDNMHIIEMP
+ HVEEVIAPIFYTVPLQLLAYHVALIKGTDVDQPRNLAKSVTVE"
+ misc_feature 3723487..3725313
+ /locus_tag="SARI_03790"
+ /note="glucosamine--fructose-6-phosphate aminotransferase;
+ Reviewed; Region: PRK00331"
+ /db_xref="CDD:234729"
+ misc_feature 3723490..3724131
+ /locus_tag="SARI_03790"
+ /note="Glutamine amidotransferases class-II
+ (Gn-AT)_GFAT-type. This domain is found at the N-terminus
+ of glucosamine-6P synthase (GlmS, or GFAT in humans). The
+ glutaminase domain catalyzes amide nitrogen transfer from
+ glutamine to the appropriate substrate. In...; Region:
+ GFAT; cd00714"
+ /db_xref="CDD:238366"
+ misc_feature order(3723490..3723492,3723565..3723567,3723706..3723711,
+ 3723715..3723720,3723745..3723747,3723781..3723786,
+ 3723856..3723861)
+ /locus_tag="SARI_03790"
+ /note="glutaminase active site [active]"
+ /db_xref="CDD:238366"
+ misc_feature 3724369..3724749
+ /locus_tag="SARI_03790"
+ /note="SIS (Sugar ISomerase) domain repeat 1 found in
+ Glucosamine 6-phosphate synthase (GlmS) and
+ Glucosamine-6-phosphate deaminase (GlmD). The SIS domain
+ is found in many phosphosugar isomerases and phosphosugar
+ binding proteins. GlmS contains a N-terminal...; Region:
+ SIS_GlmS_GlmD_1; cd05008"
+ /db_xref="CDD:240141"
+ misc_feature order(3724387..3724392,3724420..3724425,3724432..3724437,
+ 3724456..3724458,3724462..3724464,3724474..3724476,
+ 3724483..3724485,3724549..3724551)
+ /locus_tag="SARI_03790"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:240141"
+ misc_feature order(3724393..3724398,3724528..3724536)
+ /locus_tag="SARI_03790"
+ /note="active site"
+ /db_xref="CDD:240141"
+ misc_feature 3724843..3725307
+ /locus_tag="SARI_03790"
+ /note="SIS (Sugar ISomerase) domain repeat 2 found in
+ Glucosamine 6-phosphate synthase (GlmS) and
+ Glucosamine-6-phosphate deaminase (GlmD). The SIS domain
+ is found in many phosphosugar isomerases and phosphosugar
+ binding proteins. GlmS contains a N-terminal...; Region:
+ SIS_GlmS_GlmD_2; cd05009"
+ /db_xref="CDD:240142"
+ misc_feature order(3724906..3724908,3724948..3724950,3724960..3724962,
+ 3724966..3724968,3724972..3724974,3724978..3724980,
+ 3724990..3724992,3724996..3725004,3725008..3725019,
+ 3725068..3725073,3725083..3725085,3725089..3725094,
+ 3725284..3725289,3725302..3725304)
+ /locus_tag="SARI_03790"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:240142"
+ misc_feature order(3724942..3724944,3724951..3724953)
+ /locus_tag="SARI_03790"
+ /note="active site"
+ /db_xref="CDD:240142"
+ gene 3725602..3726672
+ /locus_tag="SARI_03791"
+ CDS 3725602..3726672
+ /locus_tag="SARI_03791"
+ /inference="protein motif:HMMPfam:IPR006059"
+ /inference="protein motif:HMMTigr:IPR005673"
+ /inference="similar to AA sequence:REFSEQ:YP_152802.1"
+ /note="'KEGG: mst:Msp_0343 4.4e-08 pstS; PstS K02040;
+ COG: COG0226 ABC-type phosphate transport system,
+ periplasmic component;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphate ABC transporter periplasmic
+ substrate-binding protein PstS"
+ /protein_id="YP_001572727.1"
+ /db_xref="GI:161505615"
+ /db_xref="InterPro:IPR005673"
+ /db_xref="InterPro:IPR006059"
+ /translation="MIYRNRAGDIMKVMRTTVATVVAATLSMSAFSSFAAASLTGAGA
+ TFPAPVYAKWADTYQKETGNKVNYQGIGSSGGVKQITANTVDFGASDAPLSDEKLNQE
+ GLFQFPTVIGGVVLAVNIPGLKSGELVLDGKTLGDIYLGKIKKWDDEVITKLNPGVKL
+ PSQNIAVVRRADGSGTSFVFTSYLAKVNDEWKSKVGAGSTVNWPTGLGGKGNDGIAAF
+ VQRLPGAIGYVEYAYAKQNNLAYTKLISADGKPVSPTEESFSNAAKGADWSKTFAQDL
+ TNQKGDDVWPITSTTFILVHKTQKKPEQGAEVLKFFDWAYKNGAKQANDLDYASLPDN
+ VVEQIRTAWKTSIKDNSGNALY"
+ misc_feature 3725749..3726264
+ /locus_tag="SARI_03791"
+ /note="Bacterial periplasmic transport systems use
+ membrane-bound complexes and substrate-bound,
+ membrane-associated, periplasmic binding proteins (PBPs)
+ to transport a wide variety of substrates, such as, amino
+ acids, peptides, sugars, vitamins and inorganic...;
+ Region: PBPb; cd00134"
+ /db_xref="CDD:238078"
+ misc_feature order(3725818..3725820,3725893..3725895,3726013..3726015,
+ 3726127..3726129)
+ /locus_tag="SARI_03791"
+ /note="substrate binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:238078"
+ misc_feature order(3726085..3726087,3726097..3726099,3726109..3726111)
+ /locus_tag="SARI_03791"
+ /note="membrane-bound complex binding site; other site"
+ /db_xref="CDD:238078"
+ misc_feature 3726208..3726225
+ /locus_tag="SARI_03791"
+ /note="hinge residues; other site"
+ /db_xref="CDD:238078"
+ unsure 3726452..3726505
+ /locus_tag="SARI_03791"
+ /note="Sequence derived from one plasmid subclone"
+ gene 3726697..3726849
+ /locus_tag="SARI_03792"
+ CDS 3726697..3726849
+ /locus_tag="SARI_03792"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572728.1"
+ /db_xref="GI:161505616"
+ /translation="MMLMLTRPTVLTEGRISAAPFGNFVNAFNLKSDLWLQPSLLLTR
+ RGKKAT"
+ gene 3726798..3727757
+ /gene="pstC"
+ /locus_tag="SARI_03793"
+ CDS 3726798..3727757
+ /gene="pstC"
+ /locus_tag="SARI_03793"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="protein motif:HMMTigr:IPR011864"
+ /inference="similar to AA sequence:REFSEQ:YP_152801.1"
+ /note="part of the ATP-dependent phosphate uptake system
+ PstABCS responsible for inorganic phosphate (Pi) uptake
+ under Pi starvation conditions"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphate transporter permease subunit PstC"
+ /protein_id="YP_001572729.1"
+ /db_xref="GI:161505617"
+ /db_xref="InterPro:IPR000515"
+ /db_xref="InterPro:IPR011864"
+ /translation="MAATKPAFNPPGKKGDMIFSALVKLAALIVLLMLGGIIVSLIIS
+ SWPSIQKFGFSFLWTKEWDAPNDIYGALVPIYGTLVTSFIALLIAVPVSFGIALFLTE
+ LAPGWLKRPLGIAIELLAAIPSIVYGMWGLFIFAPLFATYFQEPVGNILSNIPFVGAL
+ FSGPAFGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRI
+ VLPFTKNGVIGGIMLGLGRALGETMAVTFIIGNTYQLDSASLYMPGNSITSALANEFA
+ EAESGLHVAALMELGLILFVITFIVLAASKFMIMRLAKNEGAR"
+ misc_feature 3726798..3727754
+ /gene="pstC"
+ /locus_tag="SARI_03793"
+ /note="phosphate transporter permease subunit PstC;
+ Provisional; Region: pstC; PRK11275"
+ /db_xref="CDD:183070"
+ misc_feature 3727020..3727613
+ /gene="pstC"
+ /locus_tag="SARI_03793"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature order(3727068..3727073,3727080..3727085,3727098..3727100,
+ 3727131..3727142,3727146..3727175,3727182..3727187,
+ 3727191..3727193,3727284..3727289,3727293..3727295,
+ 3727347..3727349,3727356..3727361,3727365..3727367,
+ 3727377..3727382,3727389..3727391,3727440..3727442,
+ 3727482..3727487,3727494..3727496,3727515..3727526,
+ 3727533..3727538,3727575..3727580,3727608..3727613)
+ /gene="pstC"
+ /locus_tag="SARI_03793"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(3727149..3727193,3727515..3727532)
+ /gene="pstC"
+ /locus_tag="SARI_03793"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(3727191..3727193,3727269..3727271,3727533..3727535,
+ 3727569..3727571,3727578..3727580,3727608..3727610)
+ /gene="pstC"
+ /locus_tag="SARI_03793"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(3727392..3727430,3727446..3727451,3727461..3727463)
+ /gene="pstC"
+ /locus_tag="SARI_03793"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene 3727757..3728647
+ /gene="pstA"
+ /locus_tag="SARI_03794"
+ CDS 3727757..3728647
+ /gene="pstA"
+ /locus_tag="SARI_03794"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="protein motif:HMMTigr:IPR005672"
+ /inference="similar to AA sequence:REFSEQ:NP_462754.1"
+ /note="Part of the ABC transporter complex PstABCS
+ responsible for inorganic phosphate (Pi) uptake under Pi
+ starvation conditions"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphate transporter permease subunit PtsA"
+ /protein_id="YP_001572730.1"
+ /db_xref="GI:161505618"
+ /db_xref="InterPro:IPR000515"
+ /db_xref="InterPro:IPR005672"
+ /translation="MATLDMQNTAQLAESRRKMQARRRMKNRIALTLSMATMAFGLFW
+ LIWILLSTIMRGIDGMSLALFTEMTPPPNTAGGGLANALAGSGLLILWATVLGTPLGI
+ MAGIYLAEYGRKSWLAEIIRFINDILLSAPSIVVGLFVYTIVVAQMQHFSGWAGVIAL
+ ALLQVPIVIRTTENMLKLVPDNLREAAYALGTPKWKMISAITLKASISGIITGVLLAV
+ ARIAGETAPLLFTALSNQFWSTDMMQPIANLPVTIFKFAMSPFAEWQQLAWAGVLIIT
+ LCVLLLNILARVVFAKKKHG"
+ misc_feature 3727757..3728641
+ /gene="pstA"
+ /locus_tag="SARI_03794"
+ /note="phosphate transporter permease subunit PtsA;
+ Provisional; Region: pstA; PRK11268"
+ /db_xref="CDD:183065"
+ misc_feature 3728030..3728470
+ /gene="pstA"
+ /locus_tag="SARI_03794"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature order(3728051..3728056,3728063..3728068,3728081..3728083,
+ 3728117..3728128,3728132..3728161,3728168..3728173,
+ 3728177..3728179,3728240..3728245,3728249..3728251,
+ 3728255..3728257,3728264..3728269,3728273..3728275,
+ 3728285..3728290,3728297..3728299,3728348..3728350,
+ 3728390..3728395,3728402..3728404,3728423..3728434,
+ 3728441..3728446)
+ /gene="pstA"
+ /locus_tag="SARI_03794"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(3728135..3728179,3728423..3728440)
+ /gene="pstA"
+ /locus_tag="SARI_03794"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(3728177..3728179,3728225..3728227,3728441..3728443)
+ /gene="pstA"
+ /locus_tag="SARI_03794"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(3728300..3728338,3728354..3728359,3728369..3728371)
+ /gene="pstA"
+ /locus_tag="SARI_03794"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene 3728744..3729517
+ /gene="pstB"
+ /locus_tag="SARI_03795"
+ CDS 3728744..3729517
+ /gene="pstB"
+ /locus_tag="SARI_03795"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPanther:IPR005670"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR005670"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:INSD:AAV79487.1"
+ /note="ATP-binding protein; PstABCS is an ATP dependent
+ phosphate uptake system which is responsible for inorganic
+ phosphate uptake during phosphate starvation"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphate transporter ATP-binding protein"
+ /protein_id="YP_001572731.1"
+ /db_xref="GI:161505619"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR005670"
+ /translation="MSMVETAPSKIQVRDLNFYYGKFHALKNINLNIAKNQVTAFIGP
+ SGCGKSTLLRTFNKMYSLYPEQRAEGEILLDGDNILTNTQDIALLRAKVGMVFQKPTP
+ FPMSIYDNIAFGVRLFEKLSRADMDERVQWALTKAALWNETKDKLHQSGYSLSGGQQQ
+ RLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARC
+ SDHTAFMYLGELIEFSNTDDLFTKPAKKQTEDYITGRYG"
+ misc_feature 3728744..3729514
+ /gene="pstB"
+ /locus_tag="SARI_03795"
+ /note="phosphate transporter ATP-binding protein;
+ Provisional; Region: pstB; PRK10744"
+ /db_xref="CDD:182692"
+ misc_feature 3728774..3729460
+ /gene="pstB"
+ /locus_tag="SARI_03795"
+ /note="ATP-binding cassette domain of the phosphate
+ transport system; Region: ABC_PstB_phosphate_transporter;
+ cd03260"
+ /db_xref="CDD:213227"
+ misc_feature 3728870..3728893
+ /gene="pstB"
+ /locus_tag="SARI_03795"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213227"
+ misc_feature order(3728879..3728884,3728888..3728896,3729035..3729037,
+ 3729275..3729280,3729371..3729373)
+ /gene="pstB"
+ /locus_tag="SARI_03795"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213227"
+ misc_feature 3729026..3729037
+ /gene="pstB"
+ /locus_tag="SARI_03795"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213227"
+ misc_feature 3729203..3729232
+ /gene="pstB"
+ /locus_tag="SARI_03795"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213227"
+ misc_feature 3729263..3729280
+ /gene="pstB"
+ /locus_tag="SARI_03795"
+ /note="Walker B; other site"
+ /db_xref="CDD:213227"
+ misc_feature 3729287..3729298
+ /gene="pstB"
+ /locus_tag="SARI_03795"
+ /note="D-loop; other site"
+ /db_xref="CDD:213227"
+ misc_feature 3729359..3729379
+ /gene="pstB"
+ /locus_tag="SARI_03795"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213227"
+ gene 3729532..3730257
+ /locus_tag="SARI_03796"
+ CDS 3729532..3730257
+ /locus_tag="SARI_03796"
+ /inference="protein motif:HMMPfam:IPR008170"
+ /inference="protein motif:HMMTigr:IPR008170"
+ /inference="similar to AA sequence:SwissProt:O32488"
+ /note="regulates several genes involved in high affinity
+ phosphate uptake; under conditions of high phosphate
+ concentrations downregulates the PHO regulon"
+ /codon_start=1
+ /transl_table=11
+ /product="transcriptional regulator PhoU"
+ /protein_id="YP_001572732.1"
+ /db_xref="GI:161505620"
+ /db_xref="InterPro:IPR008170"
+ /translation="MDSLNLNKHISGQFNAELESIRTQVMTMGGMVEQQLSDAITAMH
+ NQDSELAKRVIDGDKHVNMMEVAIDEACVRIIAKRQPTASDLRLVMAIIKTIAELERI
+ GDVADKICRTALEKFSQQHQPLLVSLESLGRHTVQMLHDVLDAFARMDLDEAVRIYRE
+ DKKVDQEYEGIVRQLMTYMMEDSRTIPSVLTALFCARSIERIGDRCQNICEYIFYFVK
+ GQDFRHVGGDELDKLLAGKDPKE"
+ misc_feature 3729532..3730239
+ /locus_tag="SARI_03796"
+ /note="transcriptional regulator PhoU; Provisional;
+ Region: PRK11115"
+ /db_xref="CDD:182974"
+ misc_feature 3729604..3729870
+ /locus_tag="SARI_03796"
+ /note="PhoU domain; Region: PhoU; pfam01895"
+ /db_xref="CDD:216770"
+ misc_feature 3729913..3730170
+ /locus_tag="SARI_03796"
+ /note="PhoU domain; Region: PhoU; pfam01895"
+ /db_xref="CDD:216770"
+ gene complement(3730301..3730966)
+ /locus_tag="SARI_03797"
+ CDS complement(3730301..3730966)
+ /locus_tag="SARI_03797"
+ /inference="protein motif:HMMPfam:IPR005834"
+ /inference="protein motif:HMMTigr:IPR006402"
+ /inference="protein motif:HMMTigr:IPR006439"
+ /inference="similar to AA sequence:REFSEQ:NP_462751.1"
+ /note="'YieH; catalyzes the dephosphorylation of
+ phosphoenolpyruvate, AMP and p-nitrophenyl phosphate;
+ purine and pyrimidine nucleotides are secondary
+ substrates; member of the haloacid dehalogenase-like
+ hydrolases superfamily'"
+ /codon_start=1
+ /transl_table=11
+ /product="6-phosphogluconate phosphatase"
+ /protein_id="YP_001572733.1"
+ /db_xref="GI:161505621"
+ /db_xref="InterPro:IPR005834"
+ /db_xref="InterPro:IPR006402"
+ /db_xref="InterPro:IPR006439"
+ /translation="MTQIEAVFFDCDGTLVDSEVICSRAYVAMFRQFGITLELTEVFR
+ RFKGIKLYEIIDTISKEHGVALAKAELELVYRAEVARLFDSELEAIAGANTLLKSIKT
+ PMCVVSNGPVSKMQHSLGKVGMLHHFPDLLFSGYDIQRWKPDPALMFHAANAMNVNVE
+ QCILVDDSSAGAQSGIAAGMEVFYFCADPHNKPIVHPKVTTFTDLAQLQGLWKARGWN
+ ITH"
+ misc_feature complement(3730304..3730966)
+ /locus_tag="SARI_03797"
+ /note="6-phosphogluconate phosphatase; Provisional;
+ Region: PRK10563"
+ /db_xref="CDD:182552"
+ misc_feature complement(3730466..3730951)
+ /locus_tag="SARI_03797"
+ /note="Haloacid dehalogenase-like hydrolases. The haloacid
+ dehalogenase-like (HAD) superfamily includes L-2-haloacid
+ dehalogenase, epoxide hydrolase, phosphoserine
+ phosphatase, phosphomannomutase, phosphoglycolate
+ phosphatase, P-type ATPase, and many others; Region:
+ HAD_like; cd01427"
+ /db_xref="CDD:119389"
+ misc_feature complement(order(3730640..3730645,3730931..3730939))
+ /locus_tag="SARI_03797"
+ /note="active site"
+ /db_xref="CDD:119389"
+ misc_feature complement(3730922..3730939)
+ /locus_tag="SARI_03797"
+ /note="motif I; other site"
+ /db_xref="CDD:119389"
+ misc_feature complement(3730643..3730645)
+ /locus_tag="SARI_03797"
+ /note="motif II; other site"
+ /db_xref="CDD:119389"
+ gene 3731135..3732472
+ /locus_tag="SARI_03798"
+ CDS 3731135..3732472
+ /locus_tag="SARI_03798"
+ /inference="protein motif:HMMPfam:IPR006043"
+ /inference="protein motif:ScanRegExp:IPR013055"
+ /inference="similar to AA sequence:REFSEQ:YP_543225.1"
+ /note="'KEGG: bcz:BCZK0244 2.4e-89 guanine-hypoxanTHIne
+ permease; xanTHIne/uracil permease family protein K06901;
+ COG: COG2252 Permeases;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572734.1"
+ /db_xref="GI:161505622"
+ /db_xref="InterPro:IPR006043"
+ /db_xref="InterPro:IPR013055"
+ /translation="MSQQHTTQASGQGMLERVFKLREHGTTARTEVIAGFTTFLTMVY
+ IVFVNPQILGVAGMDTSAVFVTTCLIAAFGSILMGLFANLPVALAPAMGLNAFFAFVV
+ VQAMGLPWQVGMGAIFWGAIGLLLLTIFRVRYWMIANIPVSLRVGITSGIGLFIGMMG
+ LKNAGVIVANPETLVSIGNLTSHSVLLGILGFFIIAILASRNIHAAVLVSIIVTTLLG
+ WMLGDVHYNGIVSAPPSVSTVIGHVDLAGSLNLGLAGVIFSFMLVNLFDSSGTLIGVT
+ DKAGLADEKGKFPRMKQALFVDSVSSVAGSFIGTSSVTAYIESSSGVSVGGRTGLTAV
+ VVGLLFLLVIFLSPLAGMVPGYAAAGALIYVGVLMTSSLARVKWQDLTESVPAFITAV
+ MMPFSFSITEGIALGFISYCVMKIGTGRLRDLSPCVVIVALLFVLKIVFIDAH"
+ misc_feature 3731162..3732457
+ /locus_tag="SARI_03798"
+ /note="Xanthine/uracil/vitamin C permease [Nucleotide
+ transport and metabolism]; Region: COG2252"
+ /db_xref="CDD:225161"
+ gene complement(3732563..3733129)
+ /locus_tag="SARI_03799"
+ CDS complement(3732563..3733129)
+ /locus_tag="SARI_03799"
+ /inference="protein motif:HMMPfam:IPR005025"
+ /inference="similar to AA sequence:REFSEQ:YP_152795.1"
+ /note="'KEGG: eci:UTI89_C4266 4.7e-86 yieF; hypothetical
+ protein;
+ COG: COG0431 Predicted flavoprotein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572735.1"
+ /db_xref="GI:161505623"
+ /db_xref="InterPro:IPR005025"
+ /translation="MSETLNVVTLLGSLRKGSFNGMVARTLPKVAPTGMTVAPLPSIG
+ DIPLYDADIQQEEGFPDSVEALAEQIRDADGVVIVTPEYNYSVPGGLKNAIDWLSRLP
+ EQPLAGKPVLIQTSSMGAIGGARCQYHLRQILVFLDAMVMNKPEFMGGVIQNKVDPQA
+ GEVIDQSTLDHLTGQLTAFGEYIQRVKA"
+ misc_feature complement(3732569..3733117)
+ /locus_tag="SARI_03799"
+ /note="Predicted flavoprotein [General function prediction
+ only]; Region: COG0431"
+ /db_xref="CDD:223508"
+ misc_feature complement(3732680..3733117)
+ /locus_tag="SARI_03799"
+ /note="NADPH-dependent FMN reductase; Region: FMN_red;
+ pfam03358"
+ /db_xref="CDD:217511"
+ gene complement(3733147..3733902)
+ /locus_tag="SARI_03800"
+ CDS complement(3733147..3733902)
+ /locus_tag="SARI_03800"
+ /inference="protein motif:superfamily:IPR008278"
+ /inference="similar to AA sequence:REFSEQ:NP_458097.1"
+ /note="'KEGG: ssn:SSO_3713 3.0e-06 yhhU; hypothetical
+ protein K06133;
+ COG: COG2091 Phosphopantetheinyl transferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572736.1"
+ /db_xref="GI:161505624"
+ /db_xref="InterPro:IPR008278"
+ /translation="MATHFARGILTEGQLVSIRLSSPCHIEARKLPAHRRTRFLASRG
+ LLAELMFMLYGISELPEVIVQAKGKPAFRDKNLPGFSISYAGNMVGVALTTEGECGLD
+ MELQRASRGFHCPHSLERYPFSRNENLWIANQNDPNEARAQLITLRQSVLKLTGDVMN
+ DDPRELQLLPVAGRLKCAHVTHLEAVCDAEDVLVWSVSVTPAIEKLKVWEFDGKQGWK
+ SLPDIQTRANEPTGRLMRFAQLPAAKSYTLNRS"
+ misc_feature complement(3733246..3733902)
+ /locus_tag="SARI_03800"
+ /note="Phosphopantetheinyl transferase [Coenzyme
+ metabolism]; Region: Sfp; COG2091"
+ /db_xref="CDD:225002"
+ gene complement(3734060..3735019)
+ /locus_tag="SARI_03801"
+ CDS complement(3734060..3735019)
+ /locus_tag="SARI_03801"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="protein motif:HMMPfam:IPR005119"
+ /inference="similar to AA sequence:INSD:AAL22706.1"
+ /note="Involved in anaerobic NO protection"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional regulator YidZ"
+ /protein_id="YP_001572737.1"
+ /db_xref="GI:161505625"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR005119"
+ /translation="MKKSITSLDLNLLLCLQLLMQERSVTKTAKRMSVTPSAVSKSLA
+ KLRAWFDDPLFVNTPLGLAPTPLMVSMEQSLADWMQMGNQLLDKPHHEAPRGLKFELA
+ AESPLMMIMFNSLSQQIYQRYPQATIKVRNWDYDSLEAITRGEVDIGFTGRESHPRSR
+ ELLSLLPLAIDFEVLFSDLPWVWLREDHPALRETWNLDIFLRYPHISICWEQSDTWAL
+ DDVLQEMGRKRHIALSLPGFEQSLFMAAQPDHTLIATAPRYCQHYNQLHQLPLVARPL
+ PFDAQQREKLMVPFTLLWHKRNSHNPKIVWLRQAINALCRRLI"
+ misc_feature complement(3734063..3735019)
+ /locus_tag="SARI_03801"
+ /note="DNA-binding transcriptional regulator YidZ;
+ Provisional; Region: PRK10216"
+ /db_xref="CDD:182312"
+ misc_feature complement(3734822..3734962)
+ /locus_tag="SARI_03801"
+ /note="Bacterial regulatory helix-turn-helix protein, lysR
+ family; Region: HTH_1; pfam00126"
+ /db_xref="CDD:215735"
+ misc_feature complement(3734087..3734725)
+ /locus_tag="SARI_03801"
+ /note="The C-terminal substrate binding domain of
+ LysR-type transcriptional regulators that involved in the
+ catabolism of nitroaromatic/naphthalene compounds and that
+ of related regulators; contains the type 2 periplasmic
+ binding fold; Region: PBP2_Nitroaromatics_like; cd08417"
+ /db_xref="CDD:176109"
+ misc_feature complement(order(3734150..3734152,3734375..3734377,
+ 3734486..3734488,3734687..3734689,3734699..3734704,
+ 3734708..3734710))
+ /locus_tag="SARI_03801"
+ /note="substrate binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:176109"
+ misc_feature complement(order(3734279..3734281,3734288..3734293,
+ 3734300..3734305,3734312..3734326,3734408..3734410,
+ 3734624..3734626,3734630..3734644,3734648..3734653,
+ 3734660..3734665,3734669..3734674,3734681..3734686,
+ 3734693..3734698,3734705..3734707))
+ /locus_tag="SARI_03801"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:176109"
+ gene complement(3734988..3736175)
+ /locus_tag="SARI_03802"
+ CDS complement(3734988..3736175)
+ /locus_tag="SARI_03802"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="similar to AA sequence:INSD:AAV79480.1"
+ /note="Confers resistance to chloramphenicol"
+ /codon_start=1
+ /transl_table=11
+ /product="multidrug efflux system protein MdtL"
+ /protein_id="YP_001572738.1"
+ /db_xref="GI:161505626"
+ /db_xref="InterPro:IPR011701"
+ /translation="MKRFLLCSFTLILLYPAGIDMYLVGLPRIAADLNASEAQLHIAF
+ SVYLAGMATAMLFAGKIADRSGRKPVAIVGAIVFMMASLLCSQATEGSLFLSGRFLQG
+ VGAGSCYVVAFAILRDTLDERRRAKVLSLLNGITCIVPVLAPVLGHLIMLRFPWQSLF
+ YTMSAMGIIVCLLSLFILRETRPARLAPRDLSRSSHAAESLINRFFLSRLAITTLSVS
+ VILTFVNASPVLLMEVMEFSRGDYAITMALTAGVSMVVSFSTPFALGLFKPRTLMLVS
+ QGLFLTAGVTLSLAHTNTVTLFGLMLICAGFPVGFGVAMSQALGPFSLRAGVASSTLG
+ IAQVCGSSLWIWLAAILGISALNMLIGILIGCSIVSMLLILSVAPNRSISEHEEIHNQ
+ SRP"
+ misc_feature complement(3734997..3736175)
+ /locus_tag="SARI_03802"
+ /note="multidrug efflux system protein MdtL; Provisional;
+ Region: PRK10473"
+ /db_xref="CDD:182486"
+ misc_feature complement(3735051..3736163)
+ /locus_tag="SARI_03802"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature complement(order(3735144..3735146,3735153..3735158,
+ 3735165..3735170,3735177..3735182,3735213..3735215,
+ 3735222..3735227,3735237..3735239,3735246..3735251,
+ 3735258..3735260,3735405..3735407,3735417..3735419,
+ 3735426..3735428,3735438..3735440,3735450..3735452,
+ 3735492..3735494,3735501..3735506,3735513..3735518,
+ 3735525..3735527,3735756..3735758,3735774..3735779,
+ 3735786..3735791,3735825..3735827,3735834..3735839,
+ 3735846..3735851,3735858..3735863,3735999..3736004,
+ 3736008..3736013,3736023..3736025,3736032..3736037,
+ 3736044..3736046,3736095..3736100,3736104..3736112,
+ 3736119..3736121))
+ /locus_tag="SARI_03802"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene complement(3736335..3737753)
+ /gene="trmE"
+ /locus_tag="SARI_03803"
+ CDS complement(3736335..3737753)
+ /gene="trmE"
+ /locus_tag="SARI_03803"
+ /inference="protein motif:HMMPfam:IPR002917"
+ /inference="protein motif:HMMTigr:IPR004520"
+ /inference="protein motif:HMMTigr:IPR005225"
+ /inference="protein motif:HMMTigr:IPR005289"
+ /inference="similar to AA sequence:REFSEQ:YP_218747.1"
+ /note="'in Escherichia coli this protein is involved in
+ the biosynthesis of the hypermodified nucleoside
+ 5-methylaminomethyl-2-thiouridine, which is found in the
+ wobble position of some tRNAs and affects ribosomal
+ frameshifting; shows potassium-dependent dimerization and
+ GTP hydrolysis; also involved in regulation of
+ glutamate-dependent acid resistance and activation of
+ gadE'"
+ /codon_start=1
+ /transl_table=11
+ /product="tRNA modification GTPase TrmE"
+ /protein_id="YP_001572739.1"
+ /db_xref="GI:161505627"
+ /db_xref="InterPro:IPR002917"
+ /db_xref="InterPro:IPR004520"
+ /db_xref="InterPro:IPR005225"
+ /db_xref="InterPro:IPR005289"
+ /translation="MTGRSDDRLFYCDITRFIMSHNDTIVAQATPPGRGGVGILRISG
+ LNAKKVAQTVLGKLPKPRYADYLPFKDADGATLDQGIALWFPGPNSFTGEDVLELQGH
+ GGPVILDLLLKRILTIPGVRIARPGEFSERAFLNDKLDLAQAEAIADLIDASSEQAAR
+ SALNSLQGAFSARVNHLVEALTHLRIYVEAAIDFPDEEIDFLSDGKIEAQLNGVIADL
+ DAVRAEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREH
+ IHIDGMPLHVIDTAGLRDASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPGDI
+ WPDFIARLPKNLPITVVRNKADITGEMLGISEVNGHSLVRLSARTGEGVDVLRNHLKQ
+ SMGFDTNMEGGFLARRRHLQALAEAAEHLEQGKAQLLGAWAGELLAEELRLAQQSLSE
+ ITGEFTSDDLLGRIFSSFCIGK"
+ misc_feature complement(3736338..3737699)
+ /gene="trmE"
+ /locus_tag="SARI_03803"
+ /note="tRNA modification GTPase TrmE; Reviewed; Region:
+ trmE; PRK05291"
+ /db_xref="CDD:235392"
+ misc_feature complement(3737340..3737684)
+ /gene="trmE"
+ /locus_tag="SARI_03803"
+ /note="GTP-binding protein TrmE N-terminus; Region:
+ TrmE_N; pfam10396"
+ /db_xref="CDD:204472"
+ misc_feature complement(3736569..3737060)
+ /gene="trmE"
+ /locus_tag="SARI_03803"
+ /note="trmE is a tRNA modification GTPase; Region: trmE;
+ cd04164"
+ /db_xref="CDD:206727"
+ misc_feature complement(3737010..3737033)
+ /gene="trmE"
+ /locus_tag="SARI_03803"
+ /note="G1 box; other site"
+ /db_xref="CDD:206727"
+ misc_feature complement(order(3736620..3736628,3736686..3736688,
+ 3736692..3736697,3737007..3737018,3737022..3737024))
+ /gene="trmE"
+ /locus_tag="SARI_03803"
+ /note="GTP/Mg2+ binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:206727"
+ misc_feature complement(3736938..3736988)
+ /gene="trmE"
+ /locus_tag="SARI_03803"
+ /note="Switch I region; other site"
+ /db_xref="CDD:206727"
+ misc_feature complement(3736947..3736949)
+ /gene="trmE"
+ /locus_tag="SARI_03803"
+ /note="G2 box; other site"
+ /db_xref="CDD:206727"
+ misc_feature complement(order(3736815..3736859,3736863..3736895))
+ /gene="trmE"
+ /locus_tag="SARI_03803"
+ /note="Switch II region; other site"
+ /db_xref="CDD:206727"
+ misc_feature complement(3736881..3736892)
+ /gene="trmE"
+ /locus_tag="SARI_03803"
+ /note="G3 box; other site"
+ /db_xref="CDD:206727"
+ misc_feature complement(3736686..3736697)
+ /gene="trmE"
+ /locus_tag="SARI_03803"
+ /note="G4 box; other site"
+ /db_xref="CDD:206727"
+ misc_feature complement(3736620..3736628)
+ /gene="trmE"
+ /locus_tag="SARI_03803"
+ /note="G5 box; other site"
+ /db_xref="CDD:206727"
+ misc_feature complement(3736347..>3736409)
+ /gene="trmE"
+ /locus_tag="SARI_03803"
+ /note="Catalytic cysteine-containing C-terminus of GTPase,
+ MnmE; Region: GTPase_Cys_C; pfam12631"
+ /db_xref="CDD:204989"
+ gene complement(3737803..3739449)
+ /locus_tag="SARI_03804"
+ CDS complement(3737803..3739449)
+ /locus_tag="SARI_03804"
+ /inference="protein motif:HMMPfam:IPR001708"
+ /inference="similar to AA sequence:INSD:AAV79478.1"
+ /note="functions to insert inner membrane proteins into
+ the IM in Escherichia coli; interacts with transmembrane
+ segments; functions in both Sec-dependent and -independent
+ membrane insertion; similar to Oxa1p in mitochondria"
+ /codon_start=1
+ /transl_table=11
+ /product="putative inner membrane protein translocase
+ component YidC"
+ /protein_id="YP_001572740.1"
+ /db_xref="GI:161505628"
+ /db_xref="InterPro:IPR001708"
+ /translation="MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQTQQTTQTTTTAA
+ GSAADQGVPASGQGKLITVKTDVLDLTINTRGGDVEQALLPAYPKELGSSEPFQLLET
+ TPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNT
+ FTKTFVFKRGDYAVNVNYSVQNTGEKPLEISTFGQLKQSINLPPHRDTGSSNFALHTF
+ RGAAYSTPDEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNNFYT
+ ANLGNGIVAIGYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVAPHLDLTVDYGWLW
+ FISQPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQA
+ MRERLGDDKQRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAP
+ FALWIHDLSAQDPYYILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLW
+ FPSGLVLYYIVSNLVTIIQQQLIYRGLEKRGLHSREKKNS"
+ misc_feature complement(3737806..3739449)
+ /locus_tag="SARI_03804"
+ /note="membrane protein insertase; Provisional; Region:
+ PRK01318"
+ /db_xref="CDD:234942"
+ misc_feature complement(3737851..3738393)
+ /locus_tag="SARI_03804"
+ /note="membrane protein insertase, YidC/Oxa1 family,
+ C-terminal domain; Region: yidC_oxa1_cterm; TIGR03592"
+ /db_xref="CDD:234272"
+ gene complement(3739673..3740032)
+ /gene="rnpA"
+ /locus_tag="SARI_03805"
+ CDS complement(3739673..3740032)
+ /gene="rnpA"
+ /locus_tag="SARI_03805"
+ /inference="protein motif:BlastProDom:IPR000100"
+ /inference="protein motif:HMMPfam:IPR000100"
+ /inference="protein motif:HMMTigr:IPR000100"
+ /inference="protein motif:ScanRegExp:IPR000100"
+ /inference="similar to AA sequence:INSD:AAV79476.1"
+ /note="protein component of RNaseP which catalyzes the
+ removal of the 5'-leader sequence from pre-tRNA to produce
+ the mature 5'terminus; this enzyme also cleaves other RNA
+ substrates"
+ /codon_start=1
+ /transl_table=11
+ /product="ribonuclease P"
+ /protein_id="YP_001572741.1"
+ /db_xref="GI:161505629"
+ /db_xref="InterPro:IPR000100"
+ /translation="MVKLAFPRELRLLTPAHFTFVFQQPQRAGTPQITILGRLNSLGH
+ PRIGLTVAKKNVRRAHERNRIKRLTRESFRQRQHELPAMDFVVVAKKGVADLDNRALS
+ EALEKLWRRHCRLARGS"
+ misc_feature complement(3739691..3740032)
+ /gene="rnpA"
+ /locus_tag="SARI_03805"
+ /note="ribonuclease P; Reviewed; Region: rnpA; PRK01732"
+ /db_xref="CDD:179327"
+ gene complement(3740049..3740189)
+ /gene="rpmH"
+ /locus_tag="SARI_03806"
+ CDS complement(3740049..3740189)
+ /gene="rpmH"
+ /locus_tag="SARI_03806"
+ /inference="protein motif:BlastProDom:IPR000271"
+ /inference="protein motif:HMMPfam:IPR000271"
+ /inference="protein motif:HMMTigr:IPR000271"
+ /inference="protein motif:ScanRegExp:IPR000271"
+ /inference="similar to AA sequence:INSD:ABB68152.1"
+ /note="in Escherichia coli transcription of this gene is
+ enhanced by polyamines"
+ /codon_start=1
+ /transl_table=11
+ /product="50S ribosomal protein L34"
+ /protein_id="YP_001572742.1"
+ /db_xref="GI:161505630"
+ /db_xref="InterPro:IPR000271"
+ /translation="MKRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRARLTV
+ SK"
+ misc_feature complement(<3740097..3740189)
+ /gene="rpmH"
+ /locus_tag="SARI_03806"
+ /note="50S ribosomal protein L34; Reviewed; Region: rpmH;
+ PRK00399"
+ /db_xref="CDD:179004"
+ gene 3740840..3742249
+ /gene="dnaA"
+ /locus_tag="SARI_03807"
+ CDS 3740840..3742249
+ /gene="dnaA"
+ /locus_tag="SARI_03807"
+ /inference="protein motif:HMMPfam:IPR013159"
+ /inference="protein motif:HMMPfam:IPR013317"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMSmart:IPR013159"
+ /inference="protein motif:HMMTigr:IPR001957"
+ /inference="protein motif:ScanRegExp:IPR001957"
+ /inference="protein motif:superfamily:IPR010921"
+ /inference="similar to AA sequence:INSD:AAV79474.1"
+ /note="binds to the dnaA-box as an ATP-bound complex at
+ the origin of replication during the initiation of
+ chromosomal replication; can also affect transcription of
+ multiple genes including itself."
+ /codon_start=1
+ /transl_table=11
+ /product="chromosomal replication initiation protein"
+ /protein_id="YP_001572743.1"
+ /db_xref="GI:161505631"
+ /db_xref="InterPro:IPR001957"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR010921"
+ /db_xref="InterPro:IPR013159"
+ /db_xref="InterPro:IPR013317"
+ /translation="MESAVSLSLWQQCLARLQDELPATEFSMWIRPLQAELSDNTLAL
+ YAPNRFVLDWVRDKYLNNINGLLNTFCGADAPQLRFEVGTKPVTQTLKTPVHNIVAPA
+ QTTMAQQRVAPAARPGWDNVPAPAEPTYRSNVNVKHTFDNFVEGKSNQLARAAARQVA
+ DNPGGAYNPLFLYGGTGLGKTHLLHAVGNGIMARKPNAKVVYMHSERFVQDMVKALQN
+ NAIEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKE
+ INGVEDRLKSRFGWGLTVAIEPPELETRVAILMKKADENDIRLPGEVAFFIAKRLRSN
+ VRELEGALNRVIANANFTGRAITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIK
+ IADLLSKRRSRSVARPRQMAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQLR
+ EESHDIKEDFSNLIRTLSS"
+ misc_feature 3740861..3741046
+ /gene="dnaA"
+ /locus_tag="SARI_03807"
+ /note="DnaA N-terminal domain; Region: DnaA_N; pfam11638"
+ /db_xref="CDD:221153"
+ misc_feature 3740870..3742147
+ /gene="dnaA"
+ /locus_tag="SARI_03807"
+ /note="chromosomal replication initiator protein DnaA;
+ Region: DnaA; TIGR00362"
+ /db_xref="CDD:232941"
+ misc_feature 3741284..3741715
+ /gene="dnaA"
+ /locus_tag="SARI_03807"
+ /note="The AAA+ (ATPases Associated with a wide variety of
+ cellular Activities) superfamily represents an ancient
+ group of ATPases belonging to the ASCE (for additional
+ strand, catalytic E) division of the P-loop NTPase fold.
+ The ASCE division also includes ABC; Region: AAA; cd00009"
+ /db_xref="CDD:99707"
+ misc_feature 3741359..3741382
+ /gene="dnaA"
+ /locus_tag="SARI_03807"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature order(3741362..3741385,3741548..3741550,3741650..3741652)
+ /gene="dnaA"
+ /locus_tag="SARI_03807"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:99707"
+ misc_feature <3741527..3741937
+ /gene="dnaA"
+ /locus_tag="SARI_03807"
+ /note="The AAA+ (ATPases Associated with a wide variety of
+ cellular Activities) superfamily represents an ancient
+ group of ATPases belonging to the ASCE (for additional
+ strand, catalytic E) division of the P-loop NTPase fold.
+ The ASCE division also includes ABC; Region: AAA; cl17189"
+ /db_xref="CDD:247743"
+ misc_feature 3741536..3741553
+ /gene="dnaA"
+ /locus_tag="SARI_03807"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature 3741686..3741688
+ /gene="dnaA"
+ /locus_tag="SARI_03807"
+ /note="arginine finger; other site"
+ /db_xref="CDD:99707"
+ misc_feature 3741971..3742240
+ /gene="dnaA"
+ /locus_tag="SARI_03807"
+ /note="C-terminal domain of bacterial DnaA proteins. The
+ DNA-binding C-terminal domain of DnaA contains a
+ helix-turn-helix motif that specifically interacts with
+ the DnaA box, a 9-mer motif that occurs repetitively in
+ the replication origin oriC. Multiple...; Region:
+ Bac_DnaA_C; cd06571"
+ /db_xref="CDD:119330"
+ misc_feature order(3742040..3742042,3742064..3742069,3742088..3742090,
+ 3742106..3742114,3742139..3742153,3742160..3742162,
+ 3742169..3742174)
+ /gene="dnaA"
+ /locus_tag="SARI_03807"
+ /note="DnaA box-binding interface [nucleotide binding];
+ other site"
+ /db_xref="CDD:119330"
+ unsure 3741118..3741168
+ /gene="dnaA"
+ /locus_tag="SARI_03807"
+ /note="Sequence derived from one plasmid subclone"
+ gene 3742254..3743354
+ /locus_tag="SARI_03808"
+ CDS 3742254..3743354
+ /locus_tag="SARI_03808"
+ /inference="protein motif:Gene3D:IPR001001"
+ /inference="protein motif:HMMPfam:IPR001001"
+ /inference="protein motif:HMMSmart:IPR001001"
+ /inference="protein motif:HMMTigr:IPR001001"
+ /inference="similar to AA sequence:INSD:CAD03158.1"
+ /note="binds the polymerase to DNA and acts as a sliding
+ clamp"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA polymerase III subunit beta"
+ /protein_id="YP_001572744.1"
+ /db_xref="GI:161505632"
+ /db_xref="InterPro:IPR001001"
+ /translation="MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSL
+ TGTDLEMEMVARVTLSQPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGDRMLVRSG
+ RSRFSLSTLPAADFPNLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLF
+ ETEGSELRTVATDGHRLAVCSMPLEASLPSHSVIVPRKGVIELMRMLDGGENPLRVQI
+ GSNNIRAHVGDFIFTSKLVDGRFPDYRRVLPKNPDKHLEAGCDILKQAFARAAILSNE
+ KFRGVRLYVSENQLKITANNPEQEEAEEILDVSYGGTEMEIGFNVSYVLDVLNALKCE
+ TVRIMLTDSVSSVQIEDAASQSAAYVVMPMRL"
+ misc_feature 3742254..3743351
+ /locus_tag="SARI_03808"
+ /note="DNA polymerase III subunit beta; Validated; Region:
+ PRK05643"
+ /db_xref="CDD:235541"
+ misc_feature 3742254..3743348
+ /locus_tag="SARI_03808"
+ /note="Beta clamp domain. The beta subunit (processivity
+ factor) of DNA polymerase III holoenzyme, refered to as
+ the beta clamp, forms a ring shaped dimer that encircles
+ dsDNA (sliding clamp) in bacteria. The beta-clamp is
+ structurally similar to the trimeric...; Region:
+ beta_clamp; cd00140"
+ /db_xref="CDD:238082"
+ misc_feature order(3742323..3742325,3742470..3742472,3742491..3742493,
+ 3742845..3742847)
+ /locus_tag="SARI_03808"
+ /note="putative DNA binding surface [nucleotide binding];
+ other site"
+ /db_xref="CDD:238082"
+ misc_feature order(3742473..3742475,3742482..3742484,3742560..3742562,
+ 3742566..3742568,3743067..3743069,3743160..3743165)
+ /locus_tag="SARI_03808"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238082"
+ misc_feature order(3742767..3742769,3742773..3742784,3743211..3743213,
+ 3743337..3743348)
+ /locus_tag="SARI_03808"
+ /note="beta-clamp/clamp loader binding surface; other
+ site"
+ /db_xref="CDD:238082"
+ misc_feature order(3742767..3742769,3742773..3742778,3742992..3742994,
+ 3743097..3743099,3743136..3743141,3743220..3743222,
+ 3743337..3743348)
+ /locus_tag="SARI_03808"
+ /note="beta-clamp/translesion DNA polymerase binding
+ surface; other site"
+ /db_xref="CDD:238082"
+ unsure 3743324..3743335
+ /locus_tag="SARI_03808"
+ /note="Sequence derived from one plasmid subclone"
+ gene 3743493..3744566
+ /gene="recF"
+ /locus_tag="SARI_03809"
+ CDS 3743493..3744566
+ /gene="recF"
+ /locus_tag="SARI_03809"
+ /inference="protein motif:HMMPfam:IPR003395"
+ /inference="protein motif:HMMTigr:IPR001238"
+ /inference="protein motif:ScanRegExp:IPR001238"
+ /inference="similar to AA sequence:INSD:"
+ /note="'Required for DNA replication; binds preferentially
+ to single-stranded, linear DNA'"
+ /codon_start=1
+ /transl_table=11
+ /product="recombination protein F"
+ /protein_id="YP_001572745.1"
+ /db_xref="GI:161505633"
+ /db_xref="InterPro:IPR001238"
+ /db_xref="InterPro:IPR003395"
+ /translation="MSLSRLLIKDFRNIENADLALSPGFNFLVGANGSGKTSVLEAIY
+ TLGHGRAFRSLQIGRVIRHEQEAFVLHGRLQGEERETSIGLTKDKQGDSKVRIDGTDG
+ HKVAELAHLMPMQLITPEGFTLLNGGPKYRRAFLDWGCFHNEAGFFTAWSNLKRLLKQ
+ RNAALRQVSRYEQLRPWDKELIPLAEQISTWRAEYSSAIAQDMADTCQQFLPEFSLTF
+ SFQRGWEKETDYADVLERSFERDRILTYTAHGPHKADFRIRADGAPVEDTLSRGQLKL
+ LMCALRLAQGEFLTRESGRRCLYLIDDFASELDDARRGLLASRLKATQSQVFVSAISA
+ EHVLDMSDKNSKMFSVEKGKITD"
+ misc_feature 3743493..3744557
+ /gene="recF"
+ /locus_tag="SARI_03809"
+ /note="recF protein; Region: recf; TIGR00611"
+ /db_xref="CDD:233051"
+ misc_feature 3743499..>3743990
+ /gene="recF"
+ /locus_tag="SARI_03809"
+ /note="ATP-binding cassette transporter nucleotide-binding
+ domain; Region: ABC_ATPase; cl17201"
+ /db_xref="CDD:247755"
+ misc_feature 3743580..3743603
+ /gene="recF"
+ /locus_tag="SARI_03809"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature order(3743589..3743594,3743598..3743606,3743847..3743849)
+ /gene="recF"
+ /locus_tag="SARI_03809"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213179"
+ misc_feature 3743838..3743849
+ /gene="recF"
+ /locus_tag="SARI_03809"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213179"
+ misc_feature <3744207..3744560
+ /gene="recF"
+ /locus_tag="SARI_03809"
+ /note="ATP-binding cassette transporter nucleotide-binding
+ domain; Region: ABC_ATPase; cl17201"
+ /db_xref="CDD:247755"
+ misc_feature 3744297..3744326
+ /gene="recF"
+ /locus_tag="SARI_03809"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213179"
+ misc_feature 3744384..3744401
+ /gene="recF"
+ /locus_tag="SARI_03809"
+ /note="Walker B; other site"
+ /db_xref="CDD:213179"
+ misc_feature 3744408..3744419
+ /gene="recF"
+ /locus_tag="SARI_03809"
+ /note="D-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature 3744477..3744497
+ /gene="recF"
+ /locus_tag="SARI_03809"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213179"
+ gene 3744595..3747009
+ /gene="gyrB"
+ /locus_tag="SARI_03810"
+ CDS 3744595..3747009
+ /gene="gyrB"
+ /locus_tag="SARI_03810"
+ /inference="protein motif:BlastProDom:IPR011558"
+ /inference="protein motif:Gene3D:IPR003594"
+ /inference="protein motif:Gene3D:IPR013506"
+ /inference="protein motif:Gene3D:IPR013759"
+ /inference="protein motif:HMMPfam:IPR002288"
+ /inference="protein motif:HMMPfam:IPR003594"
+ /inference="protein motif:HMMPfam:IPR006171"
+ /inference="protein motif:HMMPfam:IPR013506"
+ /inference="protein motif:HMMSmart:IPR001241"
+ /inference="protein motif:HMMSmart:IPR003594"
+ /inference="protein motif:HMMTigr:IPR011557"
+ /inference="protein motif:ScanRegExp:IPR001241"
+ /inference="protein motif:superfamily:IPR003594"
+ /inference="protein motif:superfamily:IPR013760"
+ /note="negatively supercoils closed circular
+ double-stranded DNA"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA gyrase subunit B"
+ /protein_id="YP_001572746.1"
+ /db_xref="GI:161505634"
+ /db_xref="InterPro:IPR001241"
+ /db_xref="InterPro:IPR002288"
+ /db_xref="InterPro:IPR003594"
+ /db_xref="InterPro:IPR006171"
+ /db_xref="InterPro:IPR011557"
+ /db_xref="InterPro:IPR011558"
+ /db_xref="InterPro:IPR013506"
+ /db_xref="InterPro:IPR013759"
+ /db_xref="InterPro:IPR013760"
+ /translation="MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVV
+ DNAIDEALAGHCKDIVVTIHADNSVSVTDDGRGIPTGIHPEEGVSAAEVIMTVLHAGG
+ KFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQRDGKIHRQLYEHGVPQAPLAITGDT
+ DKTGTMVRFWPSHETFTNVTEFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHY
+ EGGIKAFVEYLNKNKTPIHPNIFYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQR
+ DGGTHLAGFRAAMTRTLNAYMDKEGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSS
+ QTKDKLVSSEVKSAVEQQMNELLSEYLLENPSDAKIVVGKIIDAARAREAARRAREMT
+ RRKGALDLAGLPGKLADCQERDPALSELYLVEGDSAGGSAKQGRNRKNQAILPLKGKI
+ LNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKLRYHSIIIMTDADVDGSHIRT
+ LLLTFFYRQMPEIVERGHVYIAQPPLYKVKKGKQEQYIKDDEAMDQYQISIALDGATL
+ HTNASAPALSGEALEKLVSEYNAAQKMIGRMERRFPKALLKELVYQPTLTEADLSNEQ
+ TVTRWVNALITELNEKEQHGSQWKFDVYTNAEQNLFEPIVRVRTHGVDTDYPLDHEFV
+ TGAEYRRICQLGEKLRGLIEEDAFIERGERRQPVASFEQALEWLVKESRRGLAIQRYK
+ GLGEMNPDQLWETTMDPESRRMLRVTVKDAIAADQLFTTLMGDAVEPRRAFIEENALK
+ AANIDI"
+ misc_feature 3744595..3747006
+ /gene="gyrB"
+ /locus_tag="SARI_03810"
+ /note="DNA gyrase subunit B; Provisional; Region: gyrB;
+ PRK14939"
+ /db_xref="CDD:237860"
+ misc_feature 3744700..>3744849
+ /gene="gyrB"
+ /locus_tag="SARI_03810"
+ /note="Histidine kinase-like ATPases; This family includes
+ several ATP-binding proteins for example: histidine
+ kinase, DNA gyrase B, topoisomerases, heat shock protein
+ HSP90, phytochrome-like ATPases and DNA mismatch repair
+ proteins; Region: HATPase_c; cd00075"
+ /db_xref="CDD:238030"
+ misc_feature 3744730..3744732
+ /gene="gyrB"
+ /locus_tag="SARI_03810"
+ /note="Mg2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature order(3744817..3744819,3744823..3744825)
+ /gene="gyrB"
+ /locus_tag="SARI_03810"
+ /note="G-X-G motif; other site"
+ /db_xref="CDD:238030"
+ misc_feature 3745252..3745725
+ /gene="gyrB"
+ /locus_tag="SARI_03810"
+ /note="TopoIIA_Trans_DNA_gyrase: Transducer domain, having
+ a ribosomal S5 domain 2-like fold, of the type found in
+ proteins of the type IIA family of DNA topoisomerases
+ similar to the B subunits of E. coli DNA gyrase and E.
+ coli Topoisomerase IV which are; Region:
+ TopoII_Trans_DNA_gyrase; cd00822"
+ /db_xref="CDD:238419"
+ misc_feature 3745405..3745407
+ /gene="gyrB"
+ /locus_tag="SARI_03810"
+ /note="anchoring element; other site"
+ /db_xref="CDD:238419"
+ misc_feature order(3745579..3745581,3745588..3745593,3745597..3745599)
+ /gene="gyrB"
+ /locus_tag="SARI_03810"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238419"
+ misc_feature order(3745597..3745599,3745603..3745605)
+ /gene="gyrB"
+ /locus_tag="SARI_03810"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238419"
+ misc_feature 3745846..3746190
+ /gene="gyrB"
+ /locus_tag="SARI_03810"
+ /note="TOPRIM_TopoIIA_GyrB: topoisomerase-primase (TOPRIM)
+ nucleotidyl transferase/hydrolase domain of the type found
+ in proteins of the type IIA family of DNA topoisomerases
+ similar to the Escherichia coli GyrB subunit. TopoIIA
+ enzymes cut both strands of the...; Region:
+ TOPRIM_TopoIIA_GyrB; cd03366"
+ /db_xref="CDD:173786"
+ misc_feature order(3745864..3745869,3745876..3745878,3746086..3746088,
+ 3746092..3746094,3746098..3746100)
+ /gene="gyrB"
+ /locus_tag="SARI_03810"
+ /note="active site"
+ /db_xref="CDD:173786"
+ misc_feature order(3745864..3745866,3746086..3746088)
+ /gene="gyrB"
+ /locus_tag="SARI_03810"
+ /note="putative metal-binding site [ion binding]; other
+ site"
+ /db_xref="CDD:173786"
+ misc_feature 3746779..3746973
+ /gene="gyrB"
+ /locus_tag="SARI_03810"
+ /note="DNA gyrase B subunit, carboxyl terminus; Region:
+ DNA_gyraseB_C; pfam00986"
+ /db_xref="CDD:201537"
+ gene 3747218..3748039
+ /locus_tag="SARI_03811"
+ CDS 3747218..3748039
+ /locus_tag="SARI_03811"
+ /inference="protein motif:HMMPfam:IPR013200"
+ /inference="protein motif:HMMTigr:IPR000150"
+ /inference="protein motif:HMMTigr:IPR006379"
+ /inference="protein motif:ScanRegExp:IPR000150"
+ /inference="similar to AA sequence:INSD:AAX67655.1"
+ /note="'YidA; catalyzes the dephosphorylation of erythrose
+ 4-phosphate (preferred substrate), mannose 1-phosphate and
+ p-nitrophenyl phosphate; hydrolyzes the
+ alpha-D-glucose-1-phosphate but not the beta form; member
+ of the haloacid dehalogenase-like hydrolases superfamily
+ and Cof family of proteins'"
+ /codon_start=1
+ /transl_table=11
+ /product="sugar phosphatase"
+ /protein_id="YP_001572747.1"
+ /db_xref="GI:161505635"
+ /db_xref="InterPro:IPR000150"
+ /db_xref="InterPro:IPR006379"
+ /db_xref="InterPro:IPR013200"
+ /translation="MAIKLIAIDMDGTLLLPDHTISPAVKNAIAAAREKGVNVVLTTG
+ RPYAGVHSYLKELHMEQPGDYCITYNGALVQKAGDGSTVAQTALSYDDYCFLEQLSRE
+ VGSHFHALDRNTLYTANRDISYYTVHESYVATIPLVFCEAEKMDPATQFLKVMMIDEP
+ AILDKAIARIPAEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADALGIKPEEVMAI
+ GDQENDIAMIEFAGMGVAMDNAIPSVKEVANFVTKSNLEDGVAWAIEKFVLNPDH"
+ misc_feature 3747218..3748027
+ /locus_tag="SARI_03811"
+ /note="sugar phosphate phosphatase; Provisional; Region:
+ PRK10513"
+ /db_xref="CDD:182509"
+ misc_feature 3747230..>3747457
+ /locus_tag="SARI_03811"
+ /note="Haloacid dehalogenase-like hydrolases. The haloacid
+ dehalogenase-like (HAD) superfamily includes L-2-haloacid
+ dehalogenase, epoxide hydrolase, phosphoserine
+ phosphatase, phosphomannomutase, phosphoglycolate
+ phosphatase, P-type ATPase, and many others; Region:
+ HAD_like; cd01427"
+ /db_xref="CDD:119389"
+ misc_feature order(3747242..3747250,3747344..3747349)
+ /locus_tag="SARI_03811"
+ /note="active site"
+ /db_xref="CDD:119389"
+ misc_feature 3747242..3747259
+ /locus_tag="SARI_03811"
+ /note="motif I; other site"
+ /db_xref="CDD:119389"
+ misc_feature 3747344..3747346
+ /locus_tag="SARI_03811"
+ /note="motif II; other site"
+ /db_xref="CDD:119389"
+ misc_feature <3747707..3747928
+ /locus_tag="SARI_03811"
+ /note="Haloacid dehalogenase-like hydrolases. The haloacid
+ dehalogenase-like (HAD) superfamily includes L-2-haloacid
+ dehalogenase, epoxide hydrolase, phosphoserine
+ phosphatase, phosphomannomutase, phosphoglycolate
+ phosphatase, P-type ATPase, and many others; Region:
+ HAD_like; cd01427"
+ /db_xref="CDD:119389"
+ gene complement(3748155..3748304)
+ /locus_tag="SARI_03812"
+ CDS complement(3748155..3748304)
+ /locus_tag="SARI_03812"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572748.1"
+ /db_xref="GI:161505636"
+ /translation="MQKMTSIAEWLFRITDSQRNWGFGLCYLYHVNNVVVLYYNLDHK
+ NDNWL"
+ gene 3748398..3748508
+ /locus_tag="SARI_03813"
+ CDS 3748398..3748508
+ /locus_tag="SARI_03813"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572749.1"
+ /db_xref="GI:161505637"
+ /translation="MSAAFDAMASPLFCHGLLNDFGFKTLLSIHFFAAKT"
+ gene complement(3748425..3748538)
+ /locus_tag="SARI_03815"
+ CDS complement(3748425..3748538)
+ /locus_tag="SARI_03815"
+ /note="'COG: COG2801 Transposase and inactivated
+ derivatives;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572750.1"
+ /db_xref="GI:161505639"
+ /translation="MSNASFYKWRSRFGGKKMYAEECLKAEIIQKAVAKKW"
+ gene 3748537..3748743
+ /locus_tag="SARI_03814"
+ CDS 3748537..3748743
+ /locus_tag="SARI_03814"
+ /note="'COG: COG3501 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572751.1"
+ /db_xref="GI:161505638"
+ /translation="MPCSRHTKEFSFENATDAQIITAVQDYKYAHVETKFANSPTLWS
+ GLKDRVVSEKSKLLDLAQYNYEVE"
+ gene 3748746..3749147
+ /locus_tag="SARI_03816"
+ CDS 3748746..3749147
+ /locus_tag="SARI_03816"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572752.1"
+ /db_xref="GI:161505640"
+ /translation="MRFINFVGVTIFVMSFSTFSQNGSEYSKEYTDCIFKTVNNPMST
+ ECIDAEINAQNKSIDSFIGKHGDITSPEDGNIVELKLFTDNQRKYIDGKCDLWLKTGG
+ QNGMLLNKQCVLDETISLKKLLSDFVSSVDG"
+ gene complement(3749394..3752084)
+ /locus_tag="SARI_03817"
+ CDS complement(3749394..3752084)
+ /locus_tag="SARI_03817"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:FPrintScan:IPR004358"
+ /inference="protein motif:Gene3D:IPR003594"
+ /inference="protein motif:HMMPfam:IPR001789"
+ /inference="protein motif:HMMPfam:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003660"
+ /inference="protein motif:HMMPfam:IPR003661"
+ /inference="protein motif:HMMPfam:IPR008207"
+ /inference="protein motif:HMMSmart:IPR001789"
+ /inference="protein motif:HMMSmart:IPR003594"
+ /inference="protein motif:HMMSmart:IPR003660"
+ /inference="protein motif:HMMSmart:IPR003661"
+ /inference="protein motif:HMMSmart:IPR008207"
+ /inference="protein motif:superfamily:IPR003594"
+ /inference="protein motif:superfamily:IPR009082"
+ /inference="protein motif:superfamily:IPR011006"
+ /note="Member of the two-component regulatory system
+ torS/torR involved in the anaerobic utilization of
+ trimethylamine-N-oxide"
+ /codon_start=1
+ /transl_table=11
+ /product="hybrid sensory histidine kinase TorS"
+ /protein_id="YP_001572753.1"
+ /db_xref="GI:161505641"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR003594"
+ /db_xref="InterPro:IPR003660"
+ /db_xref="InterPro:IPR003661"
+ /db_xref="InterPro:IPR004358"
+ /db_xref="InterPro:IPR008207"
+ /db_xref="InterPro:IPR009082"
+ /db_xref="InterPro:IPR011006"
+ /translation="MAALTLLSTVIGWISLRIISQVEQTNTQALIPTMNMARQLSEAS
+ AYELFSAQNLTNADSEGVWLAQGKMLKAQSLKINHILQALSEQGFNTSAIARQEKEIA
+ QTLGQQGTLVGEILTLRAQQQQLSRQIAEAAESIAAQAHGQANNASTSAGATQAGIYD
+ LIESGKGDQAERALDRLIDIDLEYVNQMNELRVNALRFKQLIGTLKDAQGLSDANEID
+ EKLNQLVKILSRRQQRIEDPTVRAQIADALEKINQYSTLVTLFRKENAIREQLQTLME
+ NNLFQFTRFSTEVSQLVNAIEKRNEAGLARLKHASQRGQIGLVILGILALCSLSFILW
+ RVVYRSVSRPLAQQTQALQRLLEGDIDSPFPEVAGVSELDTISRLMEAFRANVRKLNH
+ HREDLAEQVRSQTAELHALVLEHRQARAEAEKANEAKSTFLAAMSHEIRTPLYGILGT
+ VQLLADKPLMANYRDDLQAINDSGESLLAILNDILDYSAIEVGGTNVSISEEPFEPRQ
+ LLNSALHLMHSRVQVALIADFSNQLPSTLQGDPRRIRQIVINLLSNAAKFTERGNIVL
+ RTFCNDQSWFIEVEDSGCGIPEAKLTDIFKPFVQVTGRRGGTGLGLAISASLAEAMGG
+ TLTVTSMLHVGSCFRLQLPVRHPKPANKNALREPINLNGLRLLLIEDNTLTQRITAEM
+ LTSKGVKVSLAESANDALRCLTEGESFDVALVDFDLPDYDGLTLAQQLMSQYPAMKRI
+ GFSAHVIDDNLRQRTAGLFCGIIQKPVPREELYRMIAHYLQGKSHNAQAMLNEHQLAS
+ DMASVGPEKLRQWVALFKESVLPLVEEIEAARAMNDDVNIKRLAHKLKSGCASLGMTQ
+ ATDACRELEMQPLSDIDIKTIVTQGVTALDAWISSGFKEG"
+ misc_feature complement(3749415..3752084)
+ /locus_tag="SARI_03817"
+ /note="hybrid sensory histidine kinase TorS; Provisional;
+ Region: PRK11466"
+ /db_xref="CDD:236914"
+ misc_feature complement(3750621..3750797)
+ /locus_tag="SARI_03817"
+ /note="Histidine Kinase A (dimerization/phosphoacceptor)
+ domain; Histidine Kinase A dimers are formed through
+ parallel association of 2 domains creating 4-helix
+ bundles; usually these domains contain a conserved His
+ residue and are activated via...; Region: HisKA; cd00082"
+ /db_xref="CDD:119399"
+ misc_feature complement(order(3750633..3750635,3750645..3750647,
+ 3750654..3750656,3750666..3750668,3750675..3750677,
+ 3750687..3750689,3750735..3750737,3750744..3750746,
+ 3750756..3750758,3750765..3750767,3750777..3750779,
+ 3750789..3750791))
+ /locus_tag="SARI_03817"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119399"
+ misc_feature complement(3750771..3750773)
+ /locus_tag="SARI_03817"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:119399"
+ misc_feature complement(3750159..3750455)
+ /locus_tag="SARI_03817"
+ /note="Histidine kinase-like ATPases; This family includes
+ several ATP-binding proteins for example: histidine
+ kinase, DNA gyrase B, topoisomerases, heat shock protein
+ HSP90, phytochrome-like ATPases and DNA mismatch repair
+ proteins; Region: HATPase_c; cd00075"
+ /db_xref="CDD:238030"
+ misc_feature complement(order(3750171..3750173,3750177..3750182,
+ 3750195..3750197,3750201..3750203,3750249..3750260,
+ 3750327..3750332,3750336..3750338,3750342..3750344,
+ 3750348..3750350,3750414..3750416,3750423..3750425,
+ 3750435..3750437))
+ /locus_tag="SARI_03817"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature complement(3750423..3750425)
+ /locus_tag="SARI_03817"
+ /note="Mg2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature complement(order(3750252..3750254,3750258..3750260,
+ 3750330..3750332,3750336..3750338))
+ /locus_tag="SARI_03817"
+ /note="G-X-G motif; other site"
+ /db_xref="CDD:238030"
+ misc_feature complement(3749745..3750086)
+ /locus_tag="SARI_03817"
+ /note="Signal receiver domain; originally thought to be
+ unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
+ recently identified in eukaroytes ETR1 Arabidopsis
+ thaliana; this domain receives the signal from the sensor
+ partner in a two-component systems; Region: REC; cd00156"
+ /db_xref="CDD:238088"
+ misc_feature complement(order(3749787..3749792,3749799..3749801,
+ 3749856..3749858,3749916..3749918,3749940..3749942,
+ 3750072..3750077))
+ /locus_tag="SARI_03817"
+ /note="active site"
+ /db_xref="CDD:238088"
+ misc_feature complement(3749940..3749942)
+ /locus_tag="SARI_03817"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238088"
+ misc_feature complement(order(3749916..3749924,3749928..3749933))
+ /locus_tag="SARI_03817"
+ /note="intermolecular recognition site; other site"
+ /db_xref="CDD:238088"
+ misc_feature complement(3749784..3749792)
+ /locus_tag="SARI_03817"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238088"
+ misc_feature complement(3749418..3749660)
+ /locus_tag="SARI_03817"
+ /note="Histidine Phosphotransfer domain, involved in
+ signalling through a two part component systems in which
+ an autophosphorylating histidine protein kinase serves as
+ a phosphoryl donor to a response regulator protein; the
+ response regulator protein is...; Region: HPT; cd00088"
+ /db_xref="CDD:238041"
+ misc_feature complement(order(3749490..3749492,3749499..3749501,
+ 3749544..3749549,3749556..3749558))
+ /locus_tag="SARI_03817"
+ /note="putative binding surface; other site"
+ /db_xref="CDD:238041"
+ misc_feature complement(3749556..3749558)
+ /locus_tag="SARI_03817"
+ /note="active site"
+ /db_xref="CDD:238041"
+ gene 3752212..3753252
+ /locus_tag="SARI_03818"
+ CDS 3752212..3753252
+ /locus_tag="SARI_03818"
+ /inference="protein motif:HMMPfam:IPR001761"
+ /inference="similar to AA sequence:REFSEQ:YP_152780.1"
+ /note="periplasmic sensory protein associated with the
+ TorRS two-component regulatory system"
+ /codon_start=1
+ /transl_table=11
+ /product="TMAO reductase system periplasmic protein TorT"
+ /protein_id="YP_001572754.1"
+ /db_xref="GI:161505642"
+ /db_xref="InterPro:IPR001761"
+ /translation="MRALISFFFLIIIVSNVETALAGTGLLHWTRADRAIPWRQTAIS
+ AIKPWKLCALYPSLKDSYWLSVNYGMQKAAKFYGVDLKVLEANGYRQLATQQQQMMQC
+ REWGADAILLGSSTDRFPELERYAGNVPVIELVNMIHDASVATRVGLPWFQMGYLPGR
+ FLAQWSKGKTLNVLLFPGPDEAGGSQEMVAGFRQAIKGSAINIVDIAWGDNDIEVQRN
+ LLQEMLERHPDANVIAGSAIAAEAAMGEGRNSTTPLTTVSFYLTHQVYRGLKRGHVLM
+ ALSDQMAWQGELAIAQSIKVLQGQPVPENISPPVLILTHKNANSAHVRRSLSPPGFRP
+ VYLYQYTSEAKK"
+ misc_feature 3752266..3753228
+ /locus_tag="SARI_03818"
+ /note="TMAO reductase system periplasmic protein TorT;
+ Provisional; Region: PRK10936"
+ /db_xref="CDD:236801"
+ misc_feature 3752359..3753144
+ /locus_tag="SARI_03818"
+ /note="Type 1 periplasmic binding fold superfamily;
+ Region: Periplasmic_Binding_Protein_Type_1; cl10011"
+ /db_xref="CDD:245225"
+ gene complement(3753225..3753974)
+ /locus_tag="SARI_03819"
+ CDS complement(3753225..3753974)
+ /locus_tag="SARI_03819"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:BlastProDom:IPR001867"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR001789"
+ /inference="protein motif:HMMPfam:IPR001867"
+ /inference="protein motif:HMMSmart:IPR001789"
+ /inference="protein motif:ScanRegExp:IPR000169"
+ /inference="protein motif:superfamily:IPR011006"
+ /inference="similar to AA sequence:INSD:AAL22683.1"
+ /note="response regulator in two-component regulatory
+ system with TorS; involved in regulation of trimethylamine
+ N-oxide reductase genes"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional regulator TorR"
+ /protein_id="YP_001572755.1"
+ /db_xref="GI:161505643"
+ /db_xref="InterPro:IPR000169"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR001867"
+ /db_xref="InterPro:IPR011006"
+ /db_xref="InterPro:IPR011991"
+ /translation="MNGIRQYMNRYEQKEIAHRMPHHIVIVEDEPVTQARLQAYFEQE
+ GYRVSVTASGAGLRDIMEHEHVSLILLDINLPDENGLMLTRSLRERSTVGIILVTGRC
+ DQIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWRIDLARPTPQSANENCYVFSGYC
+ LNVMNHTLEHNGETIKLTRAEYELLLAFVTNPGKVLHRERLLRMLSARRVETPDLRTI
+ DVLVRRLRHKITPELLVTQHGEGYFLASEVY"
+ misc_feature complement(3753258..3753917)
+ /locus_tag="SARI_03819"
+ /note="DNA-binding transcriptional regulator TorR;
+ Provisional; Region: PRK10766"
+ /db_xref="CDD:182711"
+ misc_feature complement(3753567..3753899)
+ /locus_tag="SARI_03819"
+ /note="Signal receiver domain; originally thought to be
+ unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
+ recently identified in eukaroytes ETR1 Arabidopsis
+ thaliana; this domain receives the signal from the sensor
+ partner in a two-component systems; Region: REC; cd00156"
+ /db_xref="CDD:238088"
+ misc_feature complement(order(3753609..3753614,3753621..3753623,
+ 3753678..3753680,3753735..3753737,3753759..3753761,
+ 3753888..3753893))
+ /locus_tag="SARI_03819"
+ /note="active site"
+ /db_xref="CDD:238088"
+ misc_feature complement(3753759..3753761)
+ /locus_tag="SARI_03819"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238088"
+ misc_feature complement(order(3753735..3753743,3753747..3753752))
+ /locus_tag="SARI_03819"
+ /note="intermolecular recognition site; other site"
+ /db_xref="CDD:238088"
+ misc_feature complement(3753606..3753614)
+ /locus_tag="SARI_03819"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238088"
+ misc_feature complement(3753249..3753515)
+ /locus_tag="SARI_03819"
+ /note="Effector domain of response regulator. Bacteria and
+ certain eukaryotes like protozoa and higher plants use
+ two-component signal transduction systems to detect and
+ respond to changes in the environment. The system consists
+ of a sensor histidine kinase and...; Region: trans_reg_C;
+ cd00383"
+ /db_xref="CDD:238225"
+ misc_feature complement(order(3753252..3753254,3753267..3753269,
+ 3753288..3753293,3753315..3753317,3753324..3753326,
+ 3753381..3753386,3753441..3753443))
+ /locus_tag="SARI_03819"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:238225"
+ gene complement(3753971..3754111)
+ /locus_tag="SARI_03821"
+ CDS complement(3753971..3754111)
+ /locus_tag="SARI_03821"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572756.1"
+ /db_xref="GI:161505645"
+ /translation="MTSASIDQRALGLSSALQSFRIIAPVIIWFNAQILFRKYEQRHW
+ SG"
+ gene 3754047..3755231
+ /locus_tag="SARI_03820"
+ CDS 3754047..3755231
+ /locus_tag="SARI_03820"
+ /inference="protein motif:BlastProDom:IPR005126"
+ /inference="protein motif:HMMPfam:IPR005126"
+ /inference="protein motif:HMMPIR:IPR009154"
+ /inference="protein motif:HMMTigr:IPR009154"
+ /inference="protein motif:superfamily:IPR012282"
+ /inference="similar to AA sequence:REFSEQ:NP_462723.1"
+ /note="'KEGG: eci:UTI89_C2480 6.1e-45 napC; cytochrome c
+ protein, subunit of nitrate reductase, periplasmic
+ K02569;
+ COG: COG3005 Nitrate/TMAO reductases, membrane-bound
+ tetraheme cytochrome c subunit;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572757.1"
+ /db_xref="GI:161505644"
+ /db_xref="InterPro:IPR005126"
+ /db_xref="InterPro:IPR009154"
+ /db_xref="InterPro:IPR012282"
+ /translation="MRKLWRALLRPSARWSILALVIVGIVIGVALIVLPHVGIKLTST
+ TEFCVSCHSMQPVYQEYKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDLYQ
+ TFIAHSIDTPEKFEAKRAELAEREWARMKENNSATCRSCHNYDAMDHAKQNPEAARQM
+ KIAAKENQSCIDCHKGIAHQLPDMSSGFRKQFEELRASASTHNDGDTLYSLDIKPIYA
+ AKGDKEPAGSLLPASEVKVLKRDGDWLQVQIEGWTETNGRQRVLTQLPGKRIFVASIR
+ GDVQQHVKTLEETTVAATNTQWSKLQATAWMQKGDMVNDIKPIWAYADSLYNGTCNQC
+ HGAPDKAHFDANGWIGTLNGMIGFTSLDKREERTLLKYLQMNASDTTNTPHSDKGEHN
+ EK"
+ misc_feature 3754047..3755222
+ /locus_tag="SARI_03820"
+ /note="trimethylamine N-oxide reductase cytochrome c-type
+ subunit; Provisional; Region: PRK15032"
+ /db_xref="CDD:184992"
+ misc_feature 3754047..3754601
+ /locus_tag="SARI_03820"
+ /note="cytochrome c-type protein NapC; Provisional;
+ Region: PRK10617; cl17554"
+ /db_xref="CDD:248108"
+ gene 3755221..3757773
+ /locus_tag="SARI_03822"
+ CDS 3755221..3757773
+ /locus_tag="SARI_03822"
+ /inference="protein motif:HMMPfam:IPR006656"
+ /inference="protein motif:HMMPfam:IPR006657"
+ /inference="protein motif:HMMTigr:IPR006311"
+ /inference="protein motif:HMMTigr:IPR006658"
+ /inference="protein motif:HMMTigr:IPR011887"
+ /inference="protein motif:ScanRegExp:IPR006655"
+ /inference="protein motif:superfamily:IPR009010"
+ /note="'KEGG: stm:STM3822 0. torA; trimethylamine N-oxide
+ reductase subunit K07811;
+ COG: COG0243 Anaerobic dehydrogenases, typically
+ selenocysteine-containing;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572758.1"
+ /db_xref="GI:161505646"
+ /db_xref="InterPro:IPR006311"
+ /db_xref="InterPro:IPR006655"
+ /db_xref="InterPro:IPR006656"
+ /db_xref="InterPro:IPR006657"
+ /db_xref="InterPro:IPR006658"
+ /db_xref="InterPro:IPR009010"
+ /db_xref="InterPro:IPR011887"
+ /translation="MKNKDTLHVSRRRFLAQLGGLTVAGMLGPSLLTPRSARAADAAT
+ SGAAAKEGILTGSHWGAIRATVVDGRFVAAKPFEQDKYPSKMIAGLPDHVHNAARIRY
+ PMVRVDWMRKGYQSDTSQRGDNRFVRVSWDEALDLFYQELERVQKTYGPSALLTASGW
+ QSTGMFHNASGMLARAIALHGNSVSTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLV
+ LQNSKTIVLWGSDMVKNQQANWWCPDHDVYQYYEQLKEKVASGAISVISIDPVVTSTH
+ DYLGRDKVKHIAINPQTDVPLQLALAHTLYSEKLYDKNFLDNYCVGFDQFLPYLLGEK
+ DGQPKDAVWAEKLCGIDADTIRALARQMAGDRTQIIAGWCVQRMQHGEQWSWMVVVLA
+ AMLGQIGLPGGGFGFGWHYNGAGTPSRKGIILSGFSGSTTVPPVHDSTDYKGYSSTIP
+ IARFMDAILEPGKVINWNGKSVKLPPLKMCVFAGTNPFHRHQQINRIIEGWRKLETVI
+ AIDNQWTSTCRFADIVLPATTQFERNDLDQFGNHSNRGIIAMKQVVAPQFEARNDFDI
+ FRDLCRRFNREAAFTEGLDEIGWLKRIWQEGSQQGKGRGIQLPTFEVFWNQQEYIEFD
+ HPQMFVRHQAFREDPDLEPLGTPSGLIEIYSKTIADMKYDDCQGHPMWFEKIERSHGG
+ PGSQRWPLHLQSVHPDFRLHSQLCESRTLRQQYAVGGKEPVFINPQDASARGIRNGDI
+ VRVFNARGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGDINALCKYGNPNVLTLDIG
+ TSQLAQATSAHTTLVEIEKYTGHLDNVTAFNGPVEMVAQCEYVPASQGNQHD"
+ misc_feature 3755245..3757728
+ /locus_tag="SARI_03822"
+ /note="trimethylamine N-oxide reductase I catalytic
+ subunit; Provisional; Region: PRK15102"
+ /db_xref="CDD:237909"
+ misc_feature 3755380..3757257
+ /locus_tag="SARI_03822"
+ /note="The MopB_DMSOR-BSOR-TMAOR CD contains
+ dimethylsulfoxide reductase (DMSOR), biotin sulfoxide
+ reductase (BSOR), trimethylamine N-oxide reductase
+ (TMAOR) and other related proteins. DMSOR always catalyzes
+ the reduction of DMSO to dimethylsulfide, but its...;
+ Region: MopB_DMSOR-BSOR-TMAOR; cd02769"
+ /db_xref="CDD:239170"
+ misc_feature order(3755695..3755706,3755791..3755793,3755905..3755907,
+ 3755920..3755925,3756022..3756030,3756091..3756096,
+ 3756100..3756102,3756337..3756342,3756349..3756351,
+ 3756670..3756672,3756676..3756678,3756688..3756690,
+ 3756694..3756696,3756748..3756753,3756763..3756765,
+ 3756817..3756819,3756907..3756909)
+ /locus_tag="SARI_03822"
+ /note="molybdopterin cofactor binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:239170"
+ misc_feature order(3755698..3755700,3755791..3755793)
+ /locus_tag="SARI_03822"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:239170"
+ misc_feature 3757282..3757671
+ /locus_tag="SARI_03822"
+ /note="The MopB_DMSOR-BSOR-TMAOR CD contains
+ dimethylsulfoxide reductase (DMSOR), biotin sulfoxide
+ reductase (BSOR), trimethylamine N-oxide reductase
+ (TMAOR) and other related proteins. DMSOR always catalyzes
+ the reduction of DMSO to dimethylsulfide, but its...;
+ Region: MopB_CT_DMSOR-BSOR-TMAOR; cd02793"
+ /db_xref="CDD:239194"
+ misc_feature order(3757300..3757302,3757306..3757311,3757318..3757320,
+ 3757324..3757332,3757525..3757527,3757591..3757593,
+ 3757642..3757647)
+ /locus_tag="SARI_03822"
+ /note="molybdopterin cofactor binding site; other site"
+ /db_xref="CDD:239194"
+ gene 3757766..3758398
+ /gene="torD"
+ /locus_tag="SARI_03823"
+ CDS 3757766..3758398
+ /gene="torD"
+ /locus_tag="SARI_03823"
+ /inference="protein motif:HMMPfam:IPR010395"
+ /inference="similar to AA sequence:SwissProt:Q8ZKZ8"
+ /note="'TorD; involved in the biogenesis of torA; acts on
+ torA before the insertion of the molybdenum cofactor and,
+ as a result, probably favors a conformation of the
+ apoenzyme that is competent for acquiring the cofactor'"
+ /codon_start=1
+ /transl_table=11
+ /product="chaperone protein TorD"
+ /protein_id="YP_001572759.1"
+ /db_xref="GI:161505647"
+ /db_xref="InterPro:IPR010395"
+ /translation="MIKQPALAQEQYACVYAWLALLFFREVDDEGLMQLQSAEIADWL
+ ALLKRQPALTASVAQLEQKIAALRQRQDAQLELAADFCGLFLMTDKKSALPYASQYLQ
+ KEPGMIKHLLLEAGMDVNDGFKEPTDHLAIYLELLSHLHFSLGESFQQRRMNKLRQKT
+ LSSLLEWLPEFTNNCVKHDPYGFYAALSQLLLAIVRFDDGEEDFPIVAAG"
+ misc_feature 3757769..3758374
+ /gene="torD"
+ /locus_tag="SARI_03823"
+ /note="chaperone protein TorD; Validated; Region: torD;
+ PRK04976"
+ /db_xref="CDD:235326"
+ gene 3758588..3759988
+ /locus_tag="SARI_03824"
+ CDS 3758588..3759988
+ /locus_tag="SARI_03824"
+ /inference="protein motif:Gene3D:IPR012282"
+ /inference="protein motif:HMMPfam:IPR004852"
+ /inference="protein motif:superfamily:IPR012282"
+ /inference="similar to AA sequence:INSD:AAL22679.1"
+ /note="'KEGG: stm:STM3820 8.4e-254 putative cytochrome c
+ peroxidase K00428;
+ COG: COG1858 Cytochrome c peroxidase;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572760.1"
+ /db_xref="GI:161505648"
+ /db_xref="InterPro:IPR004852"
+ /db_xref="InterPro:IPR012282"
+ /translation="MKKITLYATTVITVGLLCYLGLSGYVWFHDKQRSKKNDVQASVV
+ GENNKILGYFREKGCDYCHTPSAELPFYSSFPVAKQLMDYDIQLGYKSFNLEAVRAAL
+ IADTPVPQSELNKIEWVMQHQTMPPTRYVALHWAGGVSDKERTDILNWIADQRERNYA
+ SADTDAAHRNEPVQPIPRNIPVDAKKVDLGFRLYHDERLSGDSTISCAHCHALNAGGV
+ DGRKTSIGVGGAVGPINAPTVFNSVFNIEQFWDGRAATLQAQAGGPPLNPIEMASKSW
+ DEIISKLDKDPVLKKDFQAVYPQGFTGENITDAIAEFEKTLITPDSAFDKWLRGDENA
+ LTAQQKHGYQLFKENKCATCHGGIILGGRSFEPLGLKRDFNFGEITAADIGRMNVTKE
+ VRDKLRQKVPGLRNVALTAPYFHRGDVPTLDGAVKLMLRYQVGADLPQNDIDDIVAFL
+ ESLTGVYTPYQPEYVQ"
+ misc_feature 3758633..3759052
+ /locus_tag="SARI_03824"
+ /note="Haem-binding domain; Region: Haem_bd; pfam14376"
+ /db_xref="CDD:222718"
+ misc_feature 3758960..3759985
+ /locus_tag="SARI_03824"
+ /note="Cytochrome c peroxidase [Inorganic ion transport
+ and metabolism]; Region: MauG; COG1858"
+ /db_xref="CDD:224771"
+ gene 3759985..3760614
+ /locus_tag="SARI_03825"
+ CDS 3759985..3760614
+ /locus_tag="SARI_03825"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR005895"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:INSD:AAC75261.2"
+ /note="ATP-binding protein; required for proper cytochrome
+ c maturation"
+ /codon_start=1
+ /transl_table=11
+ /product="cytochrome c biogenesis protein CcmA"
+ /protein_id="YP_001572761.1"
+ /db_xref="GI:161505649"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR005895"
+ /translation="MTMMLEARELHCERDERTLFRGLSFTVDAGEWVQITGGNGAGKT
+ TLLRLLTGLARPDGGEVYWRGEPLRRVRDSYHQDLLWTGHQPGIKTRLTAQENLRFFH
+ QDSDTAQCLEALALAGLAGYEDIPVNQLSAGQQRRVALARLWLTRAPLWILDEPFTAI
+ DVNGVARLTQRMARHTEQGGIVILTTHQPVNVAPDKIRRIALTGGRAGQ"
+ misc_feature 3759994..3760596
+ /locus_tag="SARI_03825"
+ /note="cytochrome c biogenesis protein CcmA; Provisional;
+ Region: PRK13538"
+ /db_xref="CDD:184125"
+ misc_feature 3759997..3760593
+ /locus_tag="SARI_03825"
+ /note="Cytochrome c biogenesis ATP-binding export protein;
+ Region: ABC_CcmA_heme_exporter; cd03231"
+ /db_xref="CDD:213198"
+ misc_feature 3760093..3760116
+ /locus_tag="SARI_03825"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213198"
+ misc_feature order(3760102..3760107,3760111..3760119,3760234..3760236,
+ 3760444..3760449,3760543..3760545)
+ /locus_tag="SARI_03825"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213198"
+ misc_feature 3760225..3760236
+ /locus_tag="SARI_03825"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213198"
+ misc_feature 3760372..3760401
+ /locus_tag="SARI_03825"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213198"
+ misc_feature 3760432..3760449
+ /locus_tag="SARI_03825"
+ /note="Walker B; other site"
+ /db_xref="CDD:213198"
+ misc_feature 3760456..3760467
+ /locus_tag="SARI_03825"
+ /note="D-loop; other site"
+ /db_xref="CDD:213198"
+ misc_feature 3760531..3760551
+ /locus_tag="SARI_03825"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213198"
+ gene 3760611..3761270
+ /locus_tag="SARI_03826"
+ CDS 3760611..3761270
+ /locus_tag="SARI_03826"
+ /inference="protein motif:HMMPfam:IPR003544"
+ /inference="protein motif:HMMTigr:IPR003544"
+ /inference="similar to AA sequence:INSD:ABF04391.1"
+ /note="'COG: COG2386 ABC-type transport system involved in
+ cytochrome c biogenesis, permease component;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572762.1"
+ /db_xref="GI:161505650"
+ /db_xref="InterPro:IPR003544"
+ /translation="MMWRIFRLELRVAFRHSAEIANPLWFFLIVITLFPLSIGPEPQL
+ LARIAPGIILVAALLSSLLALERLFRDDLQDGSLEQLMLLPLPLPAVVLAKVLAHWMV
+ TGLPLIVLSPLVALLLGMDVYGWKMMALTLLLGTPTLGFLGAPGVGLTVGLKRGGVLL
+ SVLVLPLTIPLLIFATAAMEAASMHLPVGGYMAILGALLAGSATLSPFATAAALRISL
+ Q"
+ misc_feature 3760623..3761255
+ /locus_tag="SARI_03826"
+ /note="heme exporter protein CcmB; Region: ccmB;
+ TIGR01190"
+ /db_xref="CDD:200083"
+ gene 3761313..3762050
+ /locus_tag="SARI_03827"
+ CDS 3761313..3762050
+ /locus_tag="SARI_03827"
+ /inference="protein motif:HMMPfam:IPR002541"
+ /inference="protein motif:HMMTigr:IPR003557"
+ /inference="similar to AA sequence:INSD:AAG57334.1"
+ /note="'KEGG: vfi:VF1822 1.3e-81 heme chaperone heme-lyase
+ K02195;
+ COG: COG0755 ABC-type transport system involved in
+ cytochrome c biogenesis, permease component;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572763.1"
+ /db_xref="GI:161505651"
+ /db_xref="InterPro:IPR002541"
+ /db_xref="InterPro:IPR003557"
+ /translation="MWKTLHQLAIPPRLYQICGGLIPWSAIASAVVLAAGWIWGFGFA
+ PADYQQGESYRIMYLHVPAAVWSMGIYASMAVAAFIGLVWQMKMANLALAAMAPVGAV
+ YTFIALVTGSAWGKPMWGTWWVWDARLTSELVLLFLYVGAIALWHAFDDRKMAGRAAG
+ ILVLTGVVNLPVIHYSVEWWNTLHQGSTRMQQSIDPAMRTPLRLAITGYLLLFITLSL
+ MRMRNLILIMEKRRPWVSELILKRGRQ"
+ misc_feature 3761445..3761987
+ /locus_tag="SARI_03827"
+ /note="heme exporter protein CcmC; Region: ccmC;
+ TIGR01191"
+ /db_xref="CDD:233306"
+ gene 3762047..3762259
+ /locus_tag="SARI_03828"
+ CDS 3762047..3762259
+ /locus_tag="SARI_03828"
+ /inference="protein motif:HMMPfam:IPR007078"
+ /inference="similar to AA sequence:INSD:AAO71197.1"
+ /note="'COG: COG3114 Heme exporter protein D;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572764.1"
+ /db_xref="GI:161505652"
+ /db_xref="InterPro:IPR007078"
+ /translation="MSTAFASWSDFFAMGGYAFYVWLAVAMTVVPVAILVVQSAMQHR
+ AILRHVAQQRAREARMRAAQAQQEAV"
+ misc_feature 3762056..>3762196
+ /locus_tag="SARI_03828"
+ /note="Heme exporter protein D [Intracellular trafficking
+ and secretion]; Region: CcmD; COG3114"
+ /db_xref="CDD:225656"
+ gene 3762256..3762735
+ /locus_tag="SARI_03829"
+ CDS 3762256..3762735
+ /locus_tag="SARI_03829"
+ /inference="protein motif:BlastProDom:IPR004329"
+ /inference="protein motif:HMMPfam:IPR004329"
+ /inference="similar to AA sequence:INSD:CAD03179.1"
+ /note="CycJ; periplasmic heme chaperone that binds heme
+ transiently via a histidine residue and delivers it to
+ newly synthesized and exported c-type cytochromes;
+ requires the ATP hydrolysis activity of the CcmA protein
+ in order to transfer the heme to the apocytochrome; part
+ of the cytochrome c maturation system; periplasmic protein
+ anchored to the inner membrane"
+ /codon_start=1
+ /transl_table=11
+ /product="cytochrome c-type biogenesis protein CcmE"
+ /protein_id="YP_001572765.1"
+ /db_xref="GI:161505653"
+ /db_xref="InterPro:IPR004329"
+ /translation="MNLRRKNRLWVVCAVLAGLALTTALVLYALRANIDLFYTPGEIL
+ YGRRETQQMPEVGQRLRVGGMVMPGSVKRAPDSLKVNFSLYDAEGVVEVTYDGILPDL
+ FREGQGVVVQGELDRRNHVQAKEVLAKHDENYTPPEVEKAMQENHRRPQSGYKDKSS"
+ misc_feature 3762256..3762732
+ /locus_tag="SARI_03829"
+ /note="cytochrome c-type biogenesis protein CcmE;
+ Reviewed; Region: PRK13150"
+ /db_xref="CDD:139376"
+ gene 3762732..3764663
+ /locus_tag="SARI_03830"
+ CDS 3762732..3764663
+ /locus_tag="SARI_03830"
+ /inference="protein motif:FPrintScan:IPR003567"
+ /inference="protein motif:FPrintScan:IPR003568"
+ /inference="protein motif:HMMPfam:IPR002541"
+ /inference="protein motif:HMMTigr:IPR003568"
+ /note="'KEGG: vfi:VF1819 3.1e-217 heme
+ chaperone--apocytochrome heme-lyase K02198;
+ COG: COG1138 Cytochrome c biogenesis factor;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572766.1"
+ /db_xref="GI:161505654"
+ /db_xref="InterPro:IPR002541"
+ /db_xref="InterPro:IPR003567"
+ /db_xref="InterPro:IPR003568"
+ /translation="MMPEIGNALLCLALGVALLLSVYPLWGAARGDARMMASSGVFAW
+ LLFLCVAGAFFVLAHAFVVNDFTVAYVAGNSNTQLPVWYRVAATWGAHEGSLLLWVLL
+ MSGWTLAVAVFSRPVPVDIVARVLAVMGMVSAGFLVFILFTSNPFARTLPDFPVEGRD
+ LNPLLQDPGLIFHPPLLYMGYVGFSVAFAFAIAALLCGRLDSAFARFSRPWTLAAWVF
+ LTLGIVLGSAWAYYELGWGGWWFWDPVENASFMPWLAGTALLHSLAVTEQRASFKAWT
+ LLLSICAFSLCLLGTFLVRSGVLVSVHAFASDPARGMFILAFMVLVTGGSLLLFAVRG
+ HRVRSRVNNALWSRESLLLGNNVLLMAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFN
+ TMFTWLMAPFALLLGVGPLVRWGRDRPRKIRNLLLVAFITTLLLSVLLPWLLQDRIAA
+ MTVAGMAMACWIGVLAVAEAVQRASRSTRTSFSYWGMVAAHLGLAVTITGIAFSQNYS
+ VERDVRMRAGDSVTIHDYRFTFREVRDITGPNYRGGVALIGVTRHGEPEAVLHAEKRL
+ YNTSRMVMTEAAIDGGLTRDLYAALGEELDNGAWAVRLYYKPFVRWIWAGGLLMALGG
+ LLCLADPRYRRRKPLPEAG"
+ misc_feature 3762888..3764633
+ /locus_tag="SARI_03830"
+ /note="c-type cytochrome biogenesis protein CcmF; Region:
+ nrfE; TIGR00353"
+ /db_xref="CDD:129451"
+ gene 3764660..3765217
+ /locus_tag="SARI_03831"
+ CDS 3764660..3765217
+ /locus_tag="SARI_03831"
+ /inference="protein motif:BlastProDom:IPR011594"
+ /inference="protein motif:Gene3D:IPR012335"
+ /inference="protein motif:HMMPfam:IPR013740"
+ /inference="protein motif:HMMTigr:IPR004799"
+ /inference="protein motif:ScanRegExp:IPR006662"
+ /inference="protein motif:superfamily:IPR012336"
+ /inference="similar to AA sequence:INSD:AAO71200.1"
+ /note="'KEGG: azo:azo3929 1.2e-30 ccmG; protein
+ disulfide-isomerase K01829;
+ COG: COG0526 Thiol-disulfide isomerase and THIoredoxins;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572767.1"
+ /db_xref="GI:161505655"
+ /db_xref="InterPro:IPR004799"
+ /db_xref="InterPro:IPR006662"
+ /db_xref="InterPro:IPR011594"
+ /db_xref="InterPro:IPR012335"
+ /db_xref="InterPro:IPR012336"
+ /db_xref="InterPro:IPR013740"
+ /translation="MKRNVLLLPLLIFLLIAAALLWQLARNAEGDDPTNLESALTGKP
+ VPAFRLESLETPGQYYQAEVLTQGKPVLLNVWATWCPTCRAEHQYLNRLAAQGIRVVG
+ LNYKDDREKAVAWLKELGNPYALSLSDSDGMLGLDLGVYGAPETFLIDGKGIIRYRHA
+ GDLNARVWESELKPLWDKYSREAAQ"
+ misc_feature 3764660..3765214
+ /locus_tag="SARI_03831"
+ /note="thiol:disulfide interchange protein DsbE;
+ Provisional; Region: PRK15412"
+ /db_xref="CDD:185310"
+ misc_feature 3764786..3765166
+ /locus_tag="SARI_03831"
+ /note="TlpA-like family, DsbE (also known as CcmG and
+ CycY) subfamily; DsbE is a membrane-anchored, periplasmic
+ TRX-like reductase containing a CXXC motif that
+ specifically donates reducing equivalents to apocytochrome
+ c via CcmH, another cytochrome c...; Region:
+ TlpA_like_DsbE; cd03010"
+ /db_xref="CDD:239308"
+ misc_feature order(3764897..3764899,3764906..3764908)
+ /locus_tag="SARI_03831"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:239308"
+ misc_feature 3764978..3765046
+ /locus_tag="SARI_03831"
+ /note="central insert; other site"
+ /db_xref="CDD:239308"
+ gene 3765214..3766257
+ /locus_tag="SARI_03832"
+ CDS 3765214..3766257
+ /locus_tag="SARI_03832"
+ /inference="protein motif:BlastProDom:IPR005616"
+ /inference="protein motif:Gene3D:IPR011990"
+ /inference="protein motif:HMMPfam:IPR005616"
+ /inference="similar to AA sequence:INSD:AAL21149.1"
+ /note="'KEGG: stm:STM4281 1.6e-17 nrfE; putative methylase
+ K04016;
+ COG: COG3088 Uncharacterized protein involved in
+ biosynthesis of c-type cytochromes;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572768.1"
+ /db_xref="GI:161505656"
+ /db_xref="InterPro:IPR005616"
+ /db_xref="InterPro:IPR011990"
+ /translation="MRFLPGMVMLMLMLVISGSALATTDVMPFKDEAQEQQFRQLTEQ
+ LRCPKCQNNSIADSGSMIATDLRQKVYELIQEGKSNKEIVDYMVARYGNFVTYDPPLT
+ PLTILLWVLPAAAVGAGGWIIFARSRRRVRLKQEEFSDAVPADGKRAGSGAYVPGIVI
+ ALIVAAISYYQTGSYGQVKIWRQATALTPVLLERALDPKAQPLNEEEMARLALGLRTR
+ LQSDPGNAEGWIMLGRIGMVLGNAGTATGAYANAYRLDPKNSDAALGYAEALTRSSDP
+ EDNRRGGELLRRLVRSDHTDIRVLSLYAFNAFEQQRFGEAVAAWEMMLKLLPAGDARR
+ AVIERSIRLAQEK"
+ misc_feature 3765214..3765672
+ /locus_tag="SARI_03832"
+ /note="Uncharacterized protein involved in biosynthesis of
+ c-type cytochromes [Posttranslational modification,
+ protein turnover, chaperones]; Region: CcmH; COG3088"
+ /db_xref="CDD:225630"
+ misc_feature <3765628..3766254
+ /locus_tag="SARI_03832"
+ /note="Cytochrome c biogenesis factor [Posttranslational
+ modification, protein turnover, chaperones]; Region:
+ COG4235"
+ /db_xref="CDD:226687"
+ gene 3766425..3767651
+ /locus_tag="SARI_03833"
+ CDS 3766425..3767651
+ /locus_tag="SARI_03833"
+ /inference="protein motif:superfamily:IPR011042"
+ /inference="similar to AA sequence:INSD:AAL22670.1"
+ /note="'KEGG: eci:UTI89_C4240 7.9e-187 yidR; hypothetical
+ protein YidR;
+ COG: NOG06296 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572769.1"
+ /db_xref="GI:161505657"
+ /db_xref="InterPro:IPR011042"
+ /translation="MKQITFTPRHHQLTNTNTWTPDSQWLVFDVRPSGASFTGETIER
+ VNVYTGEVEVIYRAAQGAHVGVATVHPVDNHYVFIHGPENPDETWHYDFHHRRGVIAT
+ SGGVTNLDAMDITAPYTPGALRGGSHVHVFSPNGELVSFTYNDHVLHERDPALDLRNV
+ GVAVPYGPVTVPVQHPREYSGSHWCVLVSRTTPAPRPGSDDINRAYEEGWVGNRQIAF
+ IGDTLSLTGKKVPELFIVDLPCHENGWKQAGDTPLTGTESTMPSPPLGVVQRRLTFTH
+ QRVYPGLTNEPRHWVRSNPQATLIAFLMRDDNGVAQLWLMSPQGGEPCQLTHHATGVQ
+ SAFNWHPSGKWLGLVLENRIACCDAQSGKIDFLTARHGNPPSADAVVFSPDGRYIAWM
+ EEVKGFRQLWVTETGR"
+ misc_feature 3766608..3766961
+ /locus_tag="SARI_03833"
+ /note="Protein of unknown function (DUF3748); Region:
+ DUF3748; pfam12566"
+ /db_xref="CDD:193082"
+ gene complement(3767653..3767985)
+ /locus_tag="SARI_03834"
+ CDS complement(3767653..3767985)
+ /locus_tag="SARI_03834"
+ /inference="protein motif:HMMPfam:IPR010780"
+ /inference="similar to AA sequence:INSD:CAD03184.1"
+ /note="'COG: COG5645 Predicted periplasmic lipoprotein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572770.1"
+ /db_xref="GI:161505658"
+ /db_xref="InterPro:IPR010780"
+ /translation="MIKNVLLTLLIWSGMLLLGGCSSVMTHTGGKEGTYPGTRASATM
+ IGNDETNWGTKSLAILDMPFTVVMDTILLPWDIFRKDNSVRSRVEKSEEETKMTNTVI
+ PPAKMPSP"
+ misc_feature complement(3767656..3767982)
+ /locus_tag="SARI_03834"
+ /note="hypothetical protein; Provisional; Region:
+ PRK11616"
+ /db_xref="CDD:183233"
+ gene 3768289..3768708
+ /locus_tag="SARI_03835"
+ CDS 3768289..3768708
+ /locus_tag="SARI_03835"
+ /inference="protein motif:HMMPfam:IPR002068"
+ /inference="protein motif:superfamily:IPR008978"
+ /inference="similar to AA sequence:REFSEQ:NP_462709.2"
+ /note="with IbpB associates with aggregated proteins to
+ stabilize and protect them from irreversible denaturation
+ and extensive proteolysis during heat shock and oxidative
+ stress"
+ /codon_start=1
+ /transl_table=11
+ /product="heat shock protein IbpA"
+ /protein_id="YP_001572771.1"
+ /db_xref="GI:161505659"
+ /db_xref="InterPro:IPR002068"
+ /db_xref="InterPro:IPR008978"
+ /translation="MIMRNFDLSPLYRSAIGFDRLFNLLENNQSQSNGGYPPYNVELV
+ DENHYRIAIAVAGFAESELDITAQDNLLVVKGAHADDQKERTYLYQGIAERNFERKFQ
+ LAENIHVRGANLVNGLLYIELERVIPEANKPRRIEIN"
+ misc_feature 3768289..3768705
+ /locus_tag="SARI_03835"
+ /note="Molecular chaperone (small heat shock protein)
+ [Posttranslational modification, protein turnover,
+ chaperones]; Region: IbpA; COG0071"
+ /db_xref="CDD:223149"
+ misc_feature 3768397..3768663
+ /locus_tag="SARI_03835"
+ /note="Alpha-crystallin domain (ACD) found in Escherichia
+ coli inclusion body-associated proteins IbpA and IbpB, and
+ similar proteins. IbpA and IbpB are 16 kDa small heat
+ shock proteins (sHsps). sHsps are molecular chaperones
+ that suppress protein aggregation...; Region:
+ ACD_IbpA-B_like; cd06470"
+ /db_xref="CDD:107227"
+ misc_feature order(3768403..3768417,3768442..3768444,3768448..3768450,
+ 3768454..3768459,3768583..3768585,3768637..3768642)
+ /locus_tag="SARI_03835"
+ /note="putative dimer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:107227"
+ gene 3768811..3769245
+ /locus_tag="SARI_03836"
+ CDS 3768811..3769245
+ /locus_tag="SARI_03836"
+ /inference="protein motif:HMMPfam:IPR002068"
+ /inference="protein motif:superfamily:IPR008978"
+ /inference="similar to AA sequence:REFSEQ:NP_462708.2"
+ /note="'16 kDa heat shock protein B; associates with
+ aggregated proteins, together with ibpA, to stabilize and
+ protect them from irreversible denaturation and extensive
+ proteolysis during heat shock and oxidative stress;
+ ATP-independent'"
+ /codon_start=1
+ /transl_table=11
+ /product="heat shock chaperone IbpB"
+ /protein_id="YP_001572772.1"
+ /db_xref="GI:161505660"
+ /db_xref="InterPro:IPR002068"
+ /db_xref="InterPro:IPR008978"
+ /translation="MIMRNYDLSPLLRQWIGFDKLANALQNSGESQSFPPYNIEKSDD
+ NHYRITLALAGFRQEDLDIQLEGTRLTVKGTPEQPEKEPKWLHQGLVMQPFSLSFTLA
+ ENMEVSGATFTNGLLHIDLTRNEPETIPPQRIAINERSALNS"
+ misc_feature 3768811..3769221
+ /locus_tag="SARI_03836"
+ /note="Molecular chaperone (small heat shock protein)
+ [Posttranslational modification, protein turnover,
+ chaperones]; Region: IbpA; COG0071"
+ /db_xref="CDD:223149"
+ misc_feature 3768913..3769179
+ /locus_tag="SARI_03836"
+ /note="Alpha-crystallin domain (ACD) found in Escherichia
+ coli inclusion body-associated proteins IbpA and IbpB, and
+ similar proteins. IbpA and IbpB are 16 kDa small heat
+ shock proteins (sHsps). sHsps are molecular chaperones
+ that suppress protein aggregation...; Region:
+ ACD_IbpA-B_like; cd06470"
+ /db_xref="CDD:107227"
+ misc_feature order(3768919..3768933,3768958..3768960,3768964..3768966,
+ 3768970..3768975,3769099..3769101,3769153..3769158)
+ /locus_tag="SARI_03836"
+ /note="putative dimer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:107227"
+ gene complement(3769557..3770303)
+ /locus_tag="SARI_03838"
+ CDS complement(3769557..3770303)
+ /locus_tag="SARI_03838"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572773.1"
+ /db_xref="GI:161505662"
+ /translation="MKAISLKTSFDDIHIRKSTSNSEHQTFWQKVLSFDGYPEHAIKL
+ SSSFNELVKVDSSISAEENEALENYVENSWEYINKYLINNEGNDSTLHLERKATLEKL
+ VNKMPLSNLDFYRAVRTDGRSFFSPLTYKLENRLIETGTILINKGFLSFTNNPYSLKA
+ FSGDTITGEVENNCIIYKLTGGVKSISKISPIDEFEGIVLPGSLLEVKHARNLNIKIK
+ SGHLRSIWIIELEKAPLSSSPHFDFYGKPV"
+ gene 3770168..3770260
+ /locus_tag="SARI_03837"
+ CDS 3770168..3770260
+ /locus_tag="SARI_03837"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572774.1"
+ /db_xref="GI:161505661"
+ /translation="MIILLHAQDIHQKRELFAKKFDVHYLMYFF"
+ gene 3770794..3772455
+ /locus_tag="SARI_03839"
+ CDS 3770794..3772455
+ /locus_tag="SARI_03839"
+ /inference="protein motif:HMMPfam:IPR006037"
+ /inference="protein motif:HMMPfam:IPR006512"
+ /inference="protein motif:HMMTigr:IPR006512"
+ /inference="similar to AA sequence:INSD:AAL22666.1"
+ /note="'COG: COG2985 Predicted permease;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572775.1"
+ /db_xref="GI:161505663"
+ /db_xref="InterPro:IPR006037"
+ /db_xref="InterPro:IPR006512"
+ /translation="MSDIALTVSVLALVAVVGLWIGNIKVRGVGFGIGGVLFGGIIVG
+ HFVDQAGMTLSGDMLHFIQEFGLILFVYTIGIQVGPGFFASLRVSGLRLNLFAVLIVI
+ MGGLVTAILHKIFAIPLPVVLGIFSGAVTNTPALGAGQQILRDLGTPVDLVDQMGMSY
+ AMAYPFGICGILLTMWLMRLIFRVNVEAEAQKHESSLANGHSLIQTMNIRVENPNLNN
+ MAIQDVPILNSDKIICSRLKRDDTLMVPSPGTIIQAGDLLHLVGQSTDLHNAQLVIGK
+ EVDTSLSTRGTDLRVERVVVTNEKVLGKRIRDLHFKERYDVVISRLNRAGVELVATSD
+ ASLQFGDILNLVGRPASIDAVANVVGNAQQKLQQVQMLPVFIGIGLGVLLGSIPLFVP
+ GFPVALKLGLAGGPLIIALILGRIGSIGKLYWFMPPSANLALRELGIVLFLAVVGLKS
+ GGNFVNTLTQGEGLSWIGYGIFITAIPLITVGLLARIFAKMNYLTLCGMLAGSMTDPP
+ ALAFANNLHATSGAAALSYATVYPLVMFLRIITPQLLAVIFWGIG"
+ misc_feature 3770794..3772449
+ /locus_tag="SARI_03839"
+ /note="putative transporter; Validated; Region: PRK03818"
+ /db_xref="CDD:179654"
+ misc_feature <3770935..3771333
+ /locus_tag="SARI_03839"
+ /note="Predicted Permease Membrane Region; Region:
+ Asp-Al_Ex; pfam06826"
+ /db_xref="CDD:219194"
+ misc_feature 3771427..3771618
+ /locus_tag="SARI_03839"
+ /note="TrkA-C domain; Region: TrkA_C; pfam02080"
+ /db_xref="CDD:216867"
+ misc_feature 3771664..3771873
+ /locus_tag="SARI_03839"
+ /note="TrkA-C domain; Region: TrkA_C; pfam02080"
+ /db_xref="CDD:216867"
+ misc_feature <3772054..3772392
+ /locus_tag="SARI_03839"
+ /note="AspT/YidE/YbjL antiporter duplication domain;
+ Region: YidE_YbjL_dupl; TIGR01625"
+ /db_xref="CDD:130686"
+ gene complement(3772489..3773352)
+ /locus_tag="SARI_03840"
+ CDS complement(3772489..3773352)
+ /locus_tag="SARI_03840"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR000005"
+ /inference="protein motif:HMMSmart:IPR000005"
+ /inference="protein motif:ScanRegExp:IPR000005"
+ /inference="protein motif:superfamily:IPR003313"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:INSD:BAE77613.1"
+ /note="'KEGG: bha:BH0394 9.9e-09 adaA;
+ methylphosphotriester-DNA alkyltransferase (AraC/XylS
+ family) K00567;
+ COG: COG2207 AraC-type DNA-binding domain-containing
+ proteins;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572776.1"
+ /db_xref="GI:161505664"
+ /db_xref="InterPro:IPR000005"
+ /db_xref="InterPro:IPR003313"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /translation="MNGNLQSSHVKNETTYNIPLLINENVISSGISLISLWHTYADKH
+ YRVIWPRDKKKPLIANSWIAVYTVQGCGKILLKDGEQITLNGNCIIFLKPTDIQSYHC
+ EGLVWEQYWMEFTPTSVMDIPIRQQSVIYNGEIYSQELMEVSQLITAAEPIKNNLAVA
+ FLTKIIYQWICLICADGKADPQRIQIEKLLAALHASLQRRWSVAEMAAAIPCSKTWLR
+ RLFLRYTGKTPKEYVMDARLELALSLLKQEGNTVSQVADTLNFFDSFHFSKAFKHKFG
+ YAPSAVLKHAK"
+ misc_feature complement(<3772969..3773160)
+ /locus_tag="SARI_03840"
+ /note="AraC-like ligand binding domain; Region:
+ AraC_binding; pfam02311"
+ /db_xref="CDD:145456"
+ misc_feature complement(3772657..3772776)
+ /locus_tag="SARI_03840"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ misc_feature complement(3772510..3772755)
+ /locus_tag="SARI_03840"
+ /note="helix_turn_helix, arabinose operon control protein;
+ Region: HTH_ARAC; smart00342"
+ /db_xref="CDD:197666"
+ gene 3773520..3775235
+ /locus_tag="SARI_03841"
+ CDS 3773520..3775235
+ /locus_tag="SARI_03841"
+ /inference="protein motif:HMMPanther:IPR001734"
+ /inference="protein motif:HMMPfam:IPR001734"
+ /inference="protein motif:HMMTigr:IPR001734"
+ /inference="protein motif:ScanRegExp:IPR001734"
+ /inference="similar to AA sequence:REFSEQ:ZP_00720499.1"
+ /note="uncharacterized member of the SSS superfamily of
+ sodium-dependent solute transporters; unknown function"
+ /codon_start=1
+ /transl_table=11
+ /product="putative symporter YidK"
+ /protein_id="YP_001572777.1"
+ /db_xref="GI:161505665"
+ /db_xref="InterPro:IPR001734"
+ /translation="MNMLQILSFVGFTLLVAIVTWWKVRKTDTGSQQGYFLAGRSLKA
+ PVIAASLMLTNLSTEQLVGLSGQAYKSGMSVMGWEVTSAVTLIFLALIFLPRYLQRGI
+ ATIPDFLEERYDKTTRIIIDFCFLIATGVCFLPIVLYSGALALNSLFHIGESLNISHG
+ AAIWLLVILLGLAGIIYAVIGGLRAMAVADSINGIGLVIGGLLVPVFGLIAMGKGSLL
+ QGIEQLTTVHAEKLNSIGGASDPLPIGAAFTGLILVNTFYWCTNQGIVQRTLASKSLA
+ EGQKGALLTAVLKMLDPLVLVLPGLIAFHLYQDLPKADMAYPTLVNNVLPTPLVGFFG
+ AVLFGAVISTFNGFLNSASTLFSMGIYRRVINENAQPERLVRVGRQFGLFIAIISILV
+ APWIANAPEGLYSWMKQLNGIYNVPLVTIIIMGFFFPRIPALAAKVAMGIGIVSYITI
+ NYLVKFDFHFLYVLACTFCINVVVMLMIGAIAPRATPFKFQDAFAVDMKPWKNAKIAA
+ VGILFAMVGVYSGLAQFGGYSTQWLTIFSYGITAAVVVYLFYSNWQARRSATAICLSN
+ AKDEA"
+ misc_feature 3773526..3775091
+ /locus_tag="SARI_03841"
+ /note="putative transporter; Provisional; Region:
+ PRK10484"
+ /db_xref="CDD:236699"
+ misc_feature 3773544..3774956
+ /locus_tag="SARI_03841"
+ /note="uncharacterized SLC5 subfamily, Escherichia coli
+ YidK-like; solute binding domain; Region: SLC5sbd_YidK;
+ cd10328"
+ /db_xref="CDD:212038"
+ misc_feature order(3773676..3773678,3773685..3773687,3774537..3774539,
+ 3774546..3774551)
+ /locus_tag="SARI_03841"
+ /note="Na binding site [ion binding]; other site"
+ /db_xref="CDD:212038"
+ gene 3775232..3776725
+ /locus_tag="SARI_03842"
+ CDS 3775232..3776725
+ /locus_tag="SARI_03842"
+ /inference="protein motif:HMMPfam:IPR000917"
+ /inference="protein motif:ScanRegExp:IPR000917"
+ /inference="similar to AA sequence:REFSEQ:ZP_00701703.1"
+ /note="'KEGG: ecj:JW3654 9.1e-257 yidJ; predicted
+ sulfatase/phosphatase;
+ COG: COG3119 Arylsulfatase A and related enzymes;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572778.1"
+ /db_xref="GI:161505666"
+ /db_xref="InterPro:IPR000917"
+ /translation="MTRPNFLFIMTDTQATNMVGCYSGKPLNTNNIDNLAAEGIRFNS
+ AYTCSPVCTPARAGLFTGIYANQSGPWTNNIAPGKNISTMGRYFKDAGYHTCYIGKWH
+ LDGHDYFGTGECPPEWDADYWYDGARYLAELTDKEIGLWRNGLNSIDDLRANNIDETF
+ TWAHRISNRAVDFLQRPERSATPFLLVISYDEPHHPFTCPAEYLEKYQDFYYDLGAKA
+ HDSLVDKPEHHRLWAQAMPSPVGEDGRYRHPLYFACNDFVDDQIGRVMKSLTPQQREN
+ TWVIYTSDHGEMMGAHRLISKGAAMYDDITRIPLIIRAPQGEARQINTPVSHIDLLPT
+ MMALAEIEKPEILPGENLLAAKPSRGVMVEFNRYEIEHDSFGGFIPVRCWVTDRYKLV
+ LNLFTSDELYDRYNDPDELHNLIDAPEFVNVRDQMHDALLDYMDKIRDPFRTYQWSLR
+ PWRKDAQPRWMGAFRPRPQDGYSPVVRDYDTGLPTQGVKVEDKKQKF"
+ misc_feature 3775238..3776545
+ /locus_tag="SARI_03842"
+ /note="Arylsulfatase A and related enzymes [Inorganic ion
+ transport and metabolism]; Region: AslA; COG3119"
+ /db_xref="CDD:225661"
+ misc_feature 3775241..3776296
+ /locus_tag="SARI_03842"
+ /note="Sulfatase; Region: Sulfatase; pfam00884"
+ /db_xref="CDD:216172"
+ gene complement(3776773..3777221)
+ /locus_tag="SARI_03843"
+ /pseudogene="unknown"
+ gene 3777317..3777664
+ /locus_tag="SARI_03844"
+ CDS 3777317..3777664
+ /locus_tag="SARI_03844"
+ /inference="protein motif:HMMPfam:IPR003807"
+ /inference="similar to AA sequence:INSD:AAL22665.1"
+ /note="'KEGG: cal:orf19.201 9.1e-06 CDC47; DNA helicase
+ and DNA replication licensing factor K02210;
+ COG: COG2149 Predicted membrane protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572780.1"
+ /db_xref="GI:161505668"
+ /db_xref="InterPro:IPR003807"
+ /translation="MKISRLGEAPDYRFSLANERTFLAWIRTSLGFLAAGVGLDQLAP
+ DFATPVIRELLALLLCLFAGGLAIYGYLRWLRNEKAMRLKEDMPYTHSLLIISVILMI
+ VAVIVMGLVLYAG"
+ misc_feature 3777317..>3777586
+ /locus_tag="SARI_03844"
+ /note="Predicted membrane protein [Function unknown];
+ Region: COG2149"
+ /db_xref="CDD:225060"
+ gene 3777654..3778016
+ /locus_tag="SARI_03845"
+ CDS 3777654..3778016
+ /locus_tag="SARI_03845"
+ /inference="similar to AA sequence:INSD:AAL22664.1"
+ /note="'COG: NOG09782 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572781.1"
+ /db_xref="GI:161505669"
+ /translation="MPDSRKARRQNDPGLQPERTSLAWFRTLLGYGALMALAIRHHWY
+ QAGFLFWVSISVLAIVAVILWRYTLSRNLMDVAHSDFSETHVVRDKFLISLAVLSLAI
+ LFAVTHIRQLIAFIGDFI"
+ misc_feature 3777687..>3777788
+ /locus_tag="SARI_03845"
+ /note="Domain of unknown function (DUF202); Region:
+ DUF202; pfam02656"
+ /db_xref="CDD:217167"
+ gene 3778013..3778543
+ /locus_tag="SARI_03846"
+ CDS 3778013..3778543
+ /locus_tag="SARI_03846"
+ /inference="similar to AA sequence:INSD:CAD03190.1"
+ /note="'COG: COG0641 Arylsulfatase regulator (Fe-S
+ oxidoreductase);
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572782.1"
+ /db_xref="GI:161505670"
+ /translation="MTGRQDIVVSNDQIQVVINRQNSQQPQQLYRNLQRLGIRNVHFI
+ PLLEHDRNGILTEDSLCSADWGRFLNSVFDIWVREDIQRISVRLFDETLQQWCGGRNG
+ AEAPETAPLSAECQKCSLLRFCGGGYPEHRNSQGKNRLCEGYQAFFNYSSPHMRVMRD
+ LLKQHRSPEELMAMLR"
+ misc_feature <3778013..3778534
+ /locus_tag="SARI_03846"
+ /note="Arylsulfatase regulator (Fe-S oxidoreductase)
+ [General function prediction only]; Region: AslB; COG0641"
+ /db_xref="CDD:223714"
+ gene complement(3778600..3779922)
+ /locus_tag="SARI_03847"
+ CDS complement(3778600..3779922)
+ /locus_tag="SARI_03847"
+ /inference="protein motif:HMMPfam:IPR001926"
+ /inference="protein motif:HMMTigr:IPR011780"
+ /inference="protein motif:ScanRegExp:IPR000634"
+ /inference="similar to AA sequence:REFSEQ:YP_218711.1"
+ /note="catalyzes the formation of pyruvate from serine"
+ /codon_start=1
+ /transl_table=11
+ /product="D-serine dehydratase"
+ /protein_id="YP_001572783.1"
+ /db_xref="GI:161505671"
+ /db_xref="InterPro:IPR000634"
+ /db_xref="InterPro:IPR001926"
+ /db_xref="InterPro:IPR011780"
+ /translation="MENIQKLIARYPLVADLVALKETTWFNPGATSLAQGLPYVGLTE
+ QDVNAAHDRLARFAPYLAKAFPETAAAGGMIESDMVAIPAMQKRLEKEYGQTIDGEML
+ LKKDSHLAISGSIKARGGIYEVLTHAEKLALEAGLLTTDDDYSVLLSPGFKQFFSRYS
+ IAVGSTGNLGLSIGIMSACIGFKVTVHMSADARAWKKAKLRRHGVTVVEYEDDYGVAV
+ EQGRKAAQADPNCFFIDDENSRTLFLGYAVAGQRLKAQFAQQGRVVDASHPLFVYLPC
+ GVGGGPGGVAFGLKLAFGDNVHCFFAEPTHSPCMLLGVYTGLHDAISVQDIGIDNLTA
+ ADGLAVGRASGFVGRAMERLLDGLYTLDDQTMYDMLGWLAQEEGIRLEPSALAGMAGP
+ QRICAAAAYPQKLGFGQALLDNATHLVWATGGGMVPEDEMEQYLAKGR"
+ misc_feature complement(3778636..3779856)
+ /locus_tag="SARI_03847"
+ /note="D-Serine dehydratase is a pyridoxal phosphate
+ (PLP)-dependent enzyme which catalyzes the conversion of
+ L- or D-serine to pyruvate and ammonia. D-serine
+ dehydratase serves as a detoxifying enzyme in most E. coli
+ strains where D-serine is a competitive...; Region:
+ D-Ser-dehyd; cd06447"
+ /db_xref="CDD:107208"
+ misc_feature complement(3778726..3779619)
+ /locus_tag="SARI_03847"
+ /note="Pyridoxal-phosphate dependent enzyme; Region: PALP;
+ pfam00291"
+ /db_xref="CDD:215840"
+ misc_feature complement(order(3778654..3778659,3778771..3778773,
+ 3779080..3779094,3779419..3779421,3779575..3779580))
+ /locus_tag="SARI_03847"
+ /note="pyridoxal 5'-phosphate binding pocket [chemical
+ binding]; other site"
+ /db_xref="CDD:107208"
+ misc_feature complement(3779575..3779577)
+ /locus_tag="SARI_03847"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:107208"
+ gene 3780110..3781183
+ /locus_tag="SARI_03848"
+ CDS 3780110..3781183
+ /locus_tag="SARI_03848"
+ /inference="protein motif:Gene3D:IPR013781"
+ /inference="similar to AA sequence:REFSEQ:YP_152756.1"
+ /note="'KEGG: bja:blr3367 4.7e-07 probable cellulase
+ K01179;
+ COG: NOG14136 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572784.1"
+ /db_xref="GI:161505672"
+ /db_xref="InterPro:IPR013781"
+ /translation="MVKILGGVVFKPLIASLMLTSAVVYARPMPLTAARYAHQLGVGM
+ DVDWARTERGIREFDPLVVRDFKAKGLTHVRIRVAGAPTEARLIHLRKLVEACEYYGV
+ IPIIAYQADAYKTDPSASHEKELINWWSVVARYFGQTSPLLGFDLIYEPADKLNHNMA
+ SLNRVYDKTIRLIHAIDPQRMIFVAPRMRAAPEDLSALKLPAQSQNYVLAEWHIFPWG
+ PLKSGGKYPWTSGTAAEKAAIRARINAAVRWQHKTGHASWVGGWAPGESIKITPVASQ
+ FAFARFMACELKKAHIPYAINADTQFYDGEEGAWRPAQEPLLNAMIAPECETPGKGNV
+ KPSVPDVISATPAATSTPGSAIP"
+ misc_feature 3780236..>3780733
+ /locus_tag="SARI_03848"
+ /note="Cellulase (glycosyl hydrolase family 5); Region:
+ Cellulase; pfam00150"
+ /db_xref="CDD:215751"
+ gene complement(3781110..3782294)
+ /gene="emrD"
+ /locus_tag="SARI_03849"
+ CDS complement(3781110..3782294)
+ /gene="emrD"
+ /locus_tag="SARI_03849"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="protein motif:HMMTigr:IPR004734"
+ /inference="similar to AA sequence:INSD:CAD03195.1"
+ /note="multidrug efflux protein involved in adaptation to
+ low energy shock"
+ /codon_start=1
+ /transl_table=11
+ /product="multidrug resistance protein D"
+ /protein_id="YP_001572785.1"
+ /db_xref="GI:161505673"
+ /db_xref="InterPro:IPR004734"
+ /db_xref="InterPro:IPR011701"
+ /translation="MKRQRNVNLLLMLVLLVAVGQMAQTIYIPAIADMAQALNVREGA
+ VQSVMAAYLLTYGVSQLFYGPLSDRVGRRPVILVGMSIFMVATLIAMTTHSLTVLIVA
+ SAMQGMGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLDTLWN
+ WRACYAFLLVLCAGVTFSMARWMPETRPAGAPRTRLIASYKTLFGNGAFNCYLLMLIG
+ GLAGIAVFEACSGVLMGAVLGLSSMVVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQ
+ SVICCLLAGLMMWIPGWFGVMNVWTLLIPAALFFFGAGMLFPLATSGAMEPFPFLAGT
+ AGALVGGLQNIGSGVLAWLSAMLPQTGQGSLGLLMTLMGLLILACWLPLASRISHQGQ
+ TV"
+ misc_feature complement(3781113..3782294)
+ /gene="emrD"
+ /locus_tag="SARI_03849"
+ /note="multidrug resistance protein D; Provisional;
+ Region: emrD; PRK11652"
+ /db_xref="CDD:183259"
+ misc_feature complement(<3781383..3782231)
+ /gene="emrD"
+ /locus_tag="SARI_03849"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature complement(order(3781515..3781517,3781527..3781529,
+ 3781536..3781538,3781548..3781550,3781560..3781562,
+ 3781602..3781604,3781653..3781658,3781665..3781670,
+ 3781677..3781679,3781860..3781862,3781878..3781883,
+ 3781890..3781895,3781929..3781931,3781938..3781943,
+ 3781950..3781955,3781962..3781967,3782103..3782108,
+ 3782112..3782117,3782127..3782129,3782136..3782141,
+ 3782148..3782150,3782199..3782204,3782208..3782216,
+ 3782223..3782225))
+ /gene="emrD"
+ /locus_tag="SARI_03849"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene complement(3782497..3783330)
+ /locus_tag="SARI_03850"
+ CDS complement(3782497..3783330)
+ /locus_tag="SARI_03850"
+ /inference="protein motif:HMMPfam:IPR000620"
+ /inference="similar to AA sequence:REFSEQ:YP_218706.1"
+ /note="'COG: COG0697 Permeases of the drug/metabolite
+ transporter (DMT) superfamily;
+ Psort location: endoplasmic reticulum, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572786.1"
+ /db_xref="GI:161505674"
+ /db_xref="InterPro:IPR000620"
+ /translation="MTLSVFCILLFAALLHASWNAIVKAGNDKLYAAIGVSGSAAIMA
+ LILLPFSPQPAHASIPFLAASTALQVVYTVLVAKTYQVSDMSQTYPLMRGTAPLLVAL
+ VSVLFLGDSLSPMAWVGIAVICTAILGMACNGRASSQRGIVLALTNACFIAGYTLVDG
+ TGVRLSETVLGYTLWSFFLNGACLLSWAMIARRRESSRYLAQQWKKGIFGGIGTMGSY
+ GLALWAMTQAPLAVVAALRETSILFGALIAWLLLKENVAGLRLVAAGGIAVGAILLRL
+ S"
+ misc_feature complement(3782563..3783303)
+ /locus_tag="SARI_03850"
+ /note="phosphonate utilization associated putative
+ membrane protein; Region: phn_DUF6; TIGR03340"
+ /db_xref="CDD:234171"
+ misc_feature complement(3782941..>3783111)
+ /locus_tag="SARI_03850"
+ /note="Small Multidrug Resistance protein; Region:
+ Multi_Drug_Res; cl00910"
+ /db_xref="CDD:242185"
+ gene complement(3783725..3784039)
+ /locus_tag="SARI_03851"
+ CDS complement(3783725..3784039)
+ /locus_tag="SARI_03851"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572787.1"
+ /db_xref="GI:161505675"
+ /translation="MTTENFSSAQKCVSDHIFLSALKTKTSPKKARFLQRDAGGSRET
+ HCVMSTAEVYAFCAERAISARILMYLSMDQKLCSVYKLLLIYTVFNYNVFDAMCYAGA
+ AS"
+ gene 3784096..3784194
+ /locus_tag="SARI_03852"
+ CDS 3784096..3784194
+ /locus_tag="SARI_03852"
+ /inference="protein motif:HMMPfam:IPR012566"
+ /note="'COG: NOG22741 non supervised orthologous group;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="ilvB operon leader peptide"
+ /protein_id="YP_001572788.1"
+ /db_xref="GI:161505676"
+ /db_xref="InterPro:IPR012566"
+ /translation="MNPSILNATLLRTAPSRAVVVVRVVVVVGNAP"
+ gene 3784302..3785990
+ /locus_tag="SARI_03853"
+ CDS 3784302..3785990
+ /locus_tag="SARI_03853"
+ /inference="protein motif:HMMPfam:IPR011766"
+ /inference="protein motif:HMMPfam:IPR012000"
+ /inference="protein motif:HMMPfam:IPR012001"
+ /inference="protein motif:HMMPIR:IPR000399"
+ /inference="protein motif:HMMPIR:IPR004407"
+ /inference="protein motif:HMMTigr:IPR012846"
+ /inference="protein motif:ScanRegExp:IPR000399"
+ /inference="similar to AA sequence:REFSEQ:NP_462695.1"
+ /note="'KEGG: spt:SPA3646 2.2e-294 ilvB; acetohydroxy acid
+ synthase I, small subunit K01652;
+ COG: COG0028 Thiamine pyrophosphate-requiring enzymes
+ [acetolactate synthase, pyruvate dehydrogenase
+ (cytochrome), glyoxylate carboligase, phosphonopyruvate
+ decarboxylase];
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="acetolactate synthase catalytic subunit"
+ /protein_id="YP_001572789.1"
+ /db_xref="GI:161505677"
+ /db_xref="InterPro:IPR000399"
+ /db_xref="InterPro:IPR004407"
+ /db_xref="InterPro:IPR011766"
+ /db_xref="InterPro:IPR012000"
+ /db_xref="InterPro:IPR012001"
+ /db_xref="InterPro:IPR012846"
+ /translation="MASSGTTSIPQRVTGAEFIVHFLERQGIRIVTGIPGGSILPVYD
+ ALSQSTQIRHILARHEQGAGFIAQGMARTEGKPAVCMACSGPGATNLVTAIADARLDS
+ IPLICITGQVPASMIGTDAFQEVDTYGISIPITKHNYLVRNVNELPQVMSDAFRLAQS
+ GRPGPVWIDVPKDVQTATIELEALPPPAEKSPSPDFSVESIREAAAMINAAKRPVLYL
+ GGGVINAPARVRELAEKAQLPTTMTLMALGMLPKAHPLSLGMLGMHGARSTNFILQEA
+ DLLIVLGARFDDRAIGKTEQFCPNAKIIHVDIDRAELGKIKQPHVAIQADVDDVLAQL
+ IPQIETQPREAWHQLVADLQQEFPCCIPQENNPLSHYGLINAVAACVDDNAIITTDVG
+ QHQMWTAQAYPLNRPRQWLTSGGLGTMGFGLPAAIGAALANPDHKVLCFSGDGSLMMN
+ IQEMATASENQLDVKIILMNNDALGLVHQQQSLFYKQGVFAATYPGSINFMQIAAGFG
+ LDTCDLNNEADPQAALQAIIRRPGPALIHVRIDAEEKVYPMVPPGAANTEMVGE"
+ misc_feature 3784302..3785987
+ /locus_tag="SARI_03853"
+ /note="acetolactate synthase catalytic subunit; Validated;
+ Region: PRK08155"
+ /db_xref="CDD:181257"
+ misc_feature 3784350..3784817
+ /locus_tag="SARI_03853"
+ /note="Pyrimidine (PYR) binding domain of POX and related
+ proteins; Region: TPP_PYR_POX_like; cd07035"
+ /db_xref="CDD:132918"
+ misc_feature order(3784389..3784391,3784404..3784409,3784419..3784421,
+ 3784431..3784433,3784458..3784478,3784485..3784487,
+ 3784494..3784499,3784506..3784511,3784515..3784523,
+ 3784557..3784559,3784578..3784580,3784590..3784592,
+ 3784599..3784604)
+ /locus_tag="SARI_03853"
+ /note="PYR/PP interface [polypeptide binding]; other site"
+ /db_xref="CDD:132918"
+ misc_feature order(3784404..3784412,3784419..3784421,3784431..3784433,
+ 3784461..3784463,3784467..3784478,3784482..3784484,
+ 3784557..3784559,3784566..3784571,3784575..3784580,
+ 3784587..3784589,3784689..3784691,3784698..3784700)
+ /locus_tag="SARI_03853"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:132918"
+ misc_feature order(3784404..3784406,3784479..3784481,3784557..3784559,
+ 3784569..3784571)
+ /locus_tag="SARI_03853"
+ /note="TPP binding site [chemical binding]; other site"
+ /db_xref="CDD:132918"
+ misc_feature 3784902..3785303
+ /locus_tag="SARI_03853"
+ /note="Thiamine pyrophosphate enzyme, central domain;
+ Region: TPP_enzyme_M; pfam00205"
+ /db_xref="CDD:215786"
+ misc_feature 3785403..3785960
+ /locus_tag="SARI_03853"
+ /note="Thiamine pyrophosphate (TPP) family,
+ Acetohydroxyacid synthase (AHAS) subfamily, TPP-binding
+ module; composed of proteins similar to the large
+ catalytic subunit of AHAS. AHAS catalyzes the condensation
+ of two molecules of pyruvate to give the...; Region:
+ TPP_AHAS; cd02015"
+ /db_xref="CDD:238973"
+ misc_feature order(3785472..3785483,3785550..3785552,3785556..3785558,
+ 3785631..3785639,3785646..3785648,3785712..3785714)
+ /locus_tag="SARI_03853"
+ /note="TPP-binding site [chemical binding]; other site"
+ /db_xref="CDD:238973"
+ misc_feature order(3785541..3785543,3785550..3785552,3785556..3785558,
+ 3785643..3785648,3785652..3785657,3785676..3785678,
+ 3785793..3785798,3785808..3785810,3785817..3785819)
+ /locus_tag="SARI_03853"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238973"
+ gene 3785994..3786284
+ /locus_tag="SARI_03854"
+ CDS 3785994..3786284
+ /locus_tag="SARI_03854"
+ /inference="protein motif:BlastProDom:IPR004789"
+ /inference="protein motif:HMMPfam:IPR002912"
+ /inference="similar to AA sequence:INSD:AAV79439.1"
+ /note="'with IlvB catalyzes the formation of
+ 2-acetolactate from pyruvate, the small subunit is
+ required for full activity and valine sensitivity; E.coli
+ produces 3 isoenzymes of acetolactate synthase which
+ differ in specificity to substrates, valine sensitivity
+ and affinity for cofactors; also known as acetolactate
+ synthase small subunit'"
+ /codon_start=1
+ /transl_table=11
+ /product="acetolactate synthase 1 regulatory subunit"
+ /protein_id="YP_001572790.1"
+ /db_xref="GI:161505678"
+ /db_xref="InterPro:IPR002912"
+ /db_xref="InterPro:IPR004789"
+ /translation="MQKQSHENVILELTVRNHPGVMTHVCGLFARRAFNVEGILCLPI
+ QGSDQSRIWLLVNDDQRLEQMISQIDKLEDVAKVVRNQSDPTMFNKIAVFFE"
+ misc_feature 3786006..>3786278
+ /locus_tag="SARI_03854"
+ /note="Acetolactate synthase, small (regulatory) subunit
+ [Amino acid transport and metabolism]; Region: IlvH;
+ COG0440"
+ /db_xref="CDD:223517"
+ misc_feature 3786021..3786230
+ /locus_tag="SARI_03854"
+ /note="N-terminal ACT domain of the Escherichia coli
+ IlvH-like regulatory subunit of acetohydroxyacid synthase
+ (AHAS); Region: ACT_AHAS; cd04878"
+ /db_xref="CDD:153150"
+ misc_feature order(3786036..3786038,3786042..3786044,3786057..3786059,
+ 3786096..3786101,3786114..3786116,3786141..3786143)
+ /locus_tag="SARI_03854"
+ /note="putative valine binding site [chemical binding];
+ other site"
+ /db_xref="CDD:153150"
+ misc_feature order(3786048..3786053,3786060..3786062,3786081..3786083,
+ 3786090..3786092,3786102..3786116,3786144..3786146)
+ /locus_tag="SARI_03854"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:153150"
+ gene complement(3786286..3787071)
+ /locus_tag="SARI_03855"
+ CDS complement(3786286..3787071)
+ /locus_tag="SARI_03855"
+ /inference="protein motif:HMMPfam:IPR001034"
+ /inference="protein motif:HMMSmart:IPR001034"
+ /inference="protein motif:ScanRegExp:IPR001034"
+ /inference="similar to AA sequence:REFSEQ:YP_152750.1"
+ /note="'COG: COG1349 Transcriptional regulators of sugar
+ metabolism;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572791.1"
+ /db_xref="GI:161505679"
+ /db_xref="InterPro:IPR001034"
+ /translation="METKQKERIRRLMELLKKTDRIHLKDAARMLEVSVMTIRRDLSQ
+ DDEPLPLTLLGGYIVMVNKPASSTNTPLPADKPHHRDDLPVAILAAGLVRENDLVFFD
+ NGPEMPLVINMIPDDITFTGICYSHRVFIALNEKPNATAILCGGTYRAKSDAFYDANN
+ PSALDSLNPRKVFISASGVHEHFGVSWFNPDDLAAKRKAMERGLRKILLARHALFDEV
+ APASIGPLSAFDVLISDRPLPTDYAVHCRNGSVKVITPDSESE"
+ misc_feature complement(3786307..3787071)
+ /locus_tag="SARI_03855"
+ /note="DNA-binding transcriptional repressor DeoR;
+ Provisional; Region: PRK10681"
+ /db_xref="CDD:182644"
+ misc_feature complement(3786895..3787050)
+ /locus_tag="SARI_03855"
+ /note="DeoR-like helix-turn-helix domain; Region:
+ HTH_DeoR; cl17531"
+ /db_xref="CDD:248085"
+ misc_feature complement(3786361..3786819)
+ /locus_tag="SARI_03855"
+ /note="DeoR C terminal sensor domain; Region: DeoRC;
+ pfam00455"
+ /db_xref="CDD:201239"
+ gene 3787396..3788316
+ /locus_tag="SARI_03856"
+ CDS 3787396..3788316
+ /locus_tag="SARI_03856"
+ /inference="protein motif:FPrintScan:IPR002139"
+ /inference="protein motif:HMMPfam:IPR011611"
+ /inference="protein motif:HMMTigr:IPR011877"
+ /inference="similar to AA sequence:INSD:CAD03201.1"
+ /note="'KEGG: stm:STM3793 5.3e-158 putative sugar kinase
+ K00852;
+ COG: COG0524 Sugar kinases, ribokinase family;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572792.1"
+ /db_xref="GI:161505680"
+ /db_xref="InterPro:IPR002139"
+ /db_xref="InterPro:IPR011611"
+ /db_xref="InterPro:IPR011877"
+ /translation="MDIAVIGSNMVDLITYTNQMPKEGETLEAPAFKIGCGGKGANQA
+ VAAAKLNSKVLMLTKVGDDIFADNTIRNLESWGINTTYVEKVPCTSSGVAPIFVNANS
+ SNSILIIKGANKFLSPEDIDRAAEDLKKCQLIILQLEVQLETVYHAIEFGKKHGIEVL
+ LNPAPALRELDMSYACKCDFFVPNETELEILTGMPVDSSDRIRAAARSLVDKGLNNII
+ VTMGEKGALWMTRDKEVHVPAFNVNAVDTSGAGDAFIGCFAHYYVQSGDVEAAMKKAV
+ LFAAFSVTGKGTQSSYPSIEQFNEYLSLNE"
+ misc_feature 3787399..3788301
+ /locus_tag="SARI_03856"
+ /note="Sugar kinases, ribokinase family [Carbohydrate
+ transport and metabolism]; Region: RbsK; COG0524"
+ /db_xref="CDD:223598"
+ misc_feature 3787399..3788277
+ /locus_tag="SARI_03856"
+ /note="Ribokinase catalyses the phosphorylation of ribose
+ to ribose-5-phosphate using ATP. This reaction is the
+ first step in the ribose metabolism. It traps ribose
+ within the cell after uptake and also prepares the sugar
+ for use in the synthesis of nucleotides...; Region:
+ ribokinase; cd01174"
+ /db_xref="CDD:238579"
+ misc_feature order(3787423..3787425,3787429..3787431,3787504..3787512,
+ 3787519..3787521,3787675..3787677,3787681..3787683,
+ 3787711..3787713,3787717..3787719,3787810..3787812,
+ 3788137..3788142,3788149..3788151,3788257..3788259)
+ /locus_tag="SARI_03856"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:238579"
+ misc_feature order(3787432..3787434,3787438..3787440,3787453..3787473,
+ 3787510..3787512,3787672..3787674,3787678..3787686,
+ 3787702..3787725,3787888..3787890)
+ /locus_tag="SARI_03856"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238579"
+ misc_feature order(3787945..3787947,3788053..3788061,3788068..3788070,
+ 3788107..3788109,3788125..3788127,3788134..3788136,
+ 3788143..3788148,3788155..3788157,3788221..3788223,
+ 3788230..3788235,3788242..3788244)
+ /locus_tag="SARI_03856"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238579"
+ gene 3788347..3789663
+ /locus_tag="SARI_03857"
+ CDS 3788347..3789663
+ /locus_tag="SARI_03857"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="protein motif:HMMTigr:IPR005275"
+ /inference="similar to AA sequence:REFSEQ:YP_152748.1"
+ /note="'COG: COG0738 Fucose permease;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572793.1"
+ /db_xref="GI:161505681"
+ /db_xref="InterPro:IPR005275"
+ /db_xref="InterPro:IPR011701"
+ /translation="MNDKNIVQMPDGYLNKTPLFQFILLSCLFPLWGCAAALNDILIT
+ QFKSVFSLSNFASALVQSAFYGGYFLIAIPASLVIKKTSYKVAILIGLTLYIVGCTLF
+ FPASHMATYTMFLAAIFAIAIGLSFLETAANTYSSMIGPKAYATLRLNISQTFYPIGA
+ AAGILLGKYLVFSEGESLEKQMAGMNAEQVHNFKVLMLENTLEPYKYMIMVLVVVMVL
+ FLLTRFPTCKVAQTASHKRPSALDTLRYLASNARFRRGIVAQFLYVGMQVAVWSFTIR
+ LALELGDINERDASTFMVYSFACFFIGKFIANILMTRFNPEKVLMLYSVIGALFLAYV
+ ALAPSFSAVYVAVLVSVLFGPCWATIYAGTLDTVDNEHTEMAGAVIVMAIVGAAVVPA
+ IQGYVADMFHSLQLSFLVSMLCFVYVGVYFWRESKVRGNLAEVAAS"
+ misc_feature 3788368..3789660
+ /locus_tag="SARI_03857"
+ /note="Fucose permease [Carbohydrate transport and
+ metabolism]; Region: FucP; COG0738"
+ /db_xref="CDD:223809"
+ misc_feature 3788410..>3788871
+ /locus_tag="SARI_03857"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature order(3788452..3788454,3788461..3788469,3788473..3788478,
+ 3788527..3788529,3788536..3788541,3788548..3788550,
+ 3788560..3788565,3788569..3788574,3788710..3788715,
+ 3788722..3788724,3788734..3788736,3788743..3788748,
+ 3788755..3788757,3788791..3788796,3788803..3788808,
+ 3788824..3788826)
+ /locus_tag="SARI_03857"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene 3789675..3790688
+ /locus_tag="SARI_03858"
+ CDS 3789675..3790688
+ /locus_tag="SARI_03858"
+ /inference="protein motif:ScanRegExp:IPR003006"
+ /inference="similar to AA sequence:REFSEQ:YP_218698.1"
+ /note="'COG: NOG07851 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572794.1"
+ /db_xref="GI:161505682"
+ /db_xref="InterPro:IPR003006"
+ /translation="MTTRITLWRELFSEQPRNLLENDDFTVTAFRYASGVEGLKIQNS
+ RGHLVILPWMGQMIWDAQFDGHDLTMRNMFRQPKSAAEVVATYGCFAFHSGLLANGCP
+ SPEDTHPLHGEMPCAAMDDAWLELDGDSLRVTGRYEYVMGFGHHYQAQPAVVMRKASA
+ LFDIQMAVTNLASVAMPLQYMCHMNYAYVPNATFRQNIPDTALTLRESVPAHVKPTER
+ WLAFNQRLLQGEASLATLNAPGFYDPEIVFFADELDKYADTPEFHMIAPDGTTFVTRF
+ ASAELNYVTRWILYNGDQQVAAFALPATCRPEGFLAAQRNGTLLQLEPQQTRTFTVTT
+ GIV"
+ misc_feature 3789813..3790679
+ /locus_tag="SARI_03858"
+ /note="deoxyribose mutarotase_like; Region:
+ deoxyribose_mutarotase; cd09269"
+ /db_xref="CDD:185703"
+ misc_feature order(3790005..3790007,3790221..3790223,3790227..3790229,
+ 3790401..3790403,3790542..3790544,3790575..3790577)
+ /locus_tag="SARI_03858"
+ /note="active site"
+ /db_xref="CDD:185703"
+ misc_feature order(3790221..3790223,3790596..3790598)
+ /locus_tag="SARI_03858"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:185703"
+ gene 3790763..3791353
+ /locus_tag="SARI_03859"
+ CDS 3790763..3791353
+ /locus_tag="SARI_03859"
+ /inference="protein motif:BlastProDom:IPR000792"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000792"
+ /inference="protein motif:HMMPfam:IPR001789"
+ /inference="protein motif:HMMSmart:IPR000792"
+ /inference="protein motif:HMMSmart:IPR001789"
+ /inference="protein motif:ScanRegExp:IPR000792"
+ /inference="protein motif:superfamily:IPR011006"
+ /inference="similar to AA sequence:REFSEQ:YP_218697.1"
+ /note="'response regulator in two-component regulatory
+ system wtih UhpB; phosphorylated UhpA is a positive
+ activator uhpT, a hexose phosphates transporter'"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional activator UhpA"
+ /protein_id="YP_001572795.2"
+ /db_xref="GI:448236286"
+ /db_xref="InterPro:IPR000792"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR011006"
+ /db_xref="InterPro:IPR011991"
+ /translation="MITVALIDDHLIVRSGFAQLLGMEPDLQVVAEFGSGREALAGLP
+ GRGVQVCICDISMPDISGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKR
+ CSPDELIAAVHTVATGGCYLTPDIAVKLAAGRQDPLTKRERQVAEKLAQGMAVKEIAA
+ ELGLSPKTVHVHRANLLEKLGVSNDVELAHRMFDGW"
+ misc_feature 3790763..3791350
+ /locus_tag="SARI_03859"
+ /note="DNA-binding transcriptional activator UhpA;
+ Provisional; Region: PRK10360"
+ /db_xref="CDD:182408"
+ misc_feature 3790778..3791110
+ /locus_tag="SARI_03859"
+ /note="Signal receiver domain; originally thought to be
+ unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
+ recently identified in eukaroytes ETR1 Arabidopsis
+ thaliana; this domain receives the signal from the sensor
+ partner in a two-component systems; Region: REC; cd00156"
+ /db_xref="CDD:238088"
+ misc_feature order(3790784..3790789,3790922..3790924,3790946..3790948,
+ 3790997..3790999,3791054..3791056,3791063..3791068)
+ /locus_tag="SARI_03859"
+ /note="active site"
+ /db_xref="CDD:238088"
+ misc_feature 3790922..3790924
+ /locus_tag="SARI_03859"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238088"
+ misc_feature order(3790931..3790936,3790940..3790948)
+ /locus_tag="SARI_03859"
+ /note="intermolecular recognition site; other site"
+ /db_xref="CDD:238088"
+ misc_feature 3791063..3791071
+ /locus_tag="SARI_03859"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238088"
+ misc_feature 3791174..3791344
+ /locus_tag="SARI_03859"
+ /note="C-terminal DNA-binding domain of LuxR-like
+ proteins. This domain contains a helix-turn-helix motif
+ and binds DNA. Proteins belonging to this group are
+ response regulators; some act as transcriptional
+ activators, others as transcriptional repressors. Many...;
+ Region: LuxR_C_like; cd06170"
+ /db_xref="CDD:99777"
+ misc_feature order(3791177..3791185,3791222..3791230,3791252..3791257,
+ 3791261..3791266,3791270..3791284,3791315..3791317)
+ /locus_tag="SARI_03859"
+ /note="DNA binding residues [nucleotide binding]"
+ /db_xref="CDD:99777"
+ misc_feature order(3791210..3791212,3791216..3791218,3791222..3791224,
+ 3791315..3791323,3791330..3791332,3791339..3791344)
+ /locus_tag="SARI_03859"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99777"
+ gene 3791353..3792855
+ /locus_tag="SARI_03860"
+ CDS 3791353..3792855
+ /locus_tag="SARI_03860"
+ /inference="protein motif:Gene3D:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003594"
+ /inference="protein motif:HMMPfam:IPR007895"
+ /inference="protein motif:HMMPfam:IPR011712"
+ /inference="protein motif:HMMPIR:IPR012053"
+ /inference="protein motif:HMMSmart:IPR003594"
+ /inference="protein motif:superfamily:IPR003594"
+ /inference="similar to AA sequence:SwissProt:P27668"
+ /note="Member of the two-component regulatory system
+ UhpB/UhpA involved in the regulation of the uptake of
+ hexose ph"
+ /codon_start=1
+ /transl_table=11
+ /product="sensory histidine kinase UhpB"
+ /protein_id="YP_001572796.1"
+ /db_xref="GI:161505684"
+ /db_xref="InterPro:IPR003594"
+ /db_xref="InterPro:IPR007895"
+ /db_xref="InterPro:IPR011712"
+ /db_xref="InterPro:IPR012053"
+ /translation="MNTLFSRLITVVACFFIFSAAWFCLWSVSLHLVERPELAALLFP
+ FGLRLGLMLQCPRGYWPVLLGAEWLLVYWLAQEVALAHLPLLMLGSVLTLLPVALTSR
+ YRHQRDWRTLLLQGAALTAAALLQSLPWLGQGEAAWNALLLTLTGGLTLAPICLVFWH
+ YLTSTTWLPLGPSLVSQPVNWRGRHLIWYLLLFIVSLWLQLGLPAELSRFTPFCLALP
+ IIALAWHYGWQGALIATLMNAIALIASQTWHDHPVDLLLSLLAQSLTGLLLGAGIQRL
+ RELNQSLQKELARNHRLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLA
+ ADNGGVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLAQAIRSLLREMELESHG
+ IVSHLDWRIDETALSESQRVTLFRVCQEGLNNIVKHANASAVTLQGWQQDERLMLVIE
+ DDGSGLPPGSHQQGFGLTGMRERVSALGGTLTISCTHGTRISVSLPQRYV"
+ misc_feature 3791362..3792846
+ /locus_tag="SARI_03860"
+ /note="sensory histidine kinase UhpB; Provisional; Region:
+ PRK11644"
+ /db_xref="CDD:236945"
+ misc_feature 3791380..3792108
+ /locus_tag="SARI_03860"
+ /note="MASE1; Region: MASE1; pfam05231"
+ /db_xref="CDD:218514"
+ misc_feature 3792265..3792426
+ /locus_tag="SARI_03860"
+ /note="Histidine kinase; Region: HisKA_3; pfam07730"
+ /db_xref="CDD:219540"
+ misc_feature 3792592..3792837
+ /locus_tag="SARI_03860"
+ /note="Histidine kinase-like ATPases; This family includes
+ several ATP-binding proteins for example: histidine
+ kinase, DNA gyrase B, topoisomerases, heat shock protein
+ HSP90, phytochrome-like ATPases and DNA mismatch repair
+ proteins; Region: HATPase_c; cd00075"
+ /db_xref="CDD:238030"
+ misc_feature order(3792610..3792612,3792622..3792624,3792631..3792633,
+ 3792697..3792699,3792703..3792705,3792709..3792711,
+ 3792715..3792720,3792742..3792753,3792799..3792801,
+ 3792805..3792807,3792814..3792819,3792823..3792825)
+ /locus_tag="SARI_03860"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature 3792622..3792624
+ /locus_tag="SARI_03860"
+ /note="Mg2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature order(3792709..3792711,3792715..3792717,3792742..3792744,
+ 3792748..3792750)
+ /locus_tag="SARI_03860"
+ /note="G-X-G motif; other site"
+ /db_xref="CDD:238030"
+ gene 3792865..3794193
+ /locus_tag="SARI_03861"
+ CDS 3792865..3794193
+ /locus_tag="SARI_03861"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="protein motif:HMMTigr:IPR000849"
+ /inference="protein motif:ScanRegExp:IPR000849"
+ /inference="similar to AA sequence:SwissProt:P27669"
+ /note="membrane protein regulates uhpT expression"
+ /codon_start=1
+ /transl_table=11
+ /product="regulatory protein UhpC"
+ /protein_id="YP_001572797.1"
+ /db_xref="GI:161505685"
+ /db_xref="InterPro:IPR000849"
+ /db_xref="InterPro:IPR011701"
+ /translation="MLSFLKAPANAPLITDKHEVDARYRYWRRHILITIWLGYALFYF
+ TRKSFSAAAPEILASGILTRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGL
+ IATGVVNILFGFSTSLWAFALLWALNAFFQGFGSPVCARLLTAWYSRTERGGWWALWN
+ SAHNVGGALIPLVMAAVALHYGWRVGMMVAGLLAIGVGMVLCWRLRDRPQAIGLPPVG
+ DWRHDALEVAQQLEGAGLSRKEILAKYVLLNPYIWLLSLCYVLVYVVRAAINDWGNLY
+ MSETLGVDLVTANTAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVG
+ SLWLMTFASYVMQAACFFTTGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLG
+ ASLSGWPLAKVLEIWHWTGFFAVIAIAAGISALLLLPFLNAQAPRETSEA"
+ misc_feature 3792886..3794187
+ /locus_tag="SARI_03861"
+ /note="regulatory protein UhpC; Provisional; Region:
+ PRK11663"
+ /db_xref="CDD:183266"
+ misc_feature 3792958..3794109
+ /locus_tag="SARI_03861"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature order(3793000..3793002,3793009..3793017,3793021..3793026,
+ 3793075..3793077,3793084..3793089,3793096..3793098,
+ 3793108..3793113,3793117..3793122,3793258..3793263,
+ 3793270..3793275,3793282..3793287,3793294..3793296,
+ 3793330..3793335,3793342..3793347,3793363..3793365,
+ 3793651..3793653,3793660..3793665,3793672..3793677,
+ 3793684..3793686,3793726..3793728,3793738..3793740,
+ 3793750..3793752,3793759..3793761,3793771..3793773,
+ 3793927..3793929,3793936..3793941,3793948..3793950,
+ 3793960..3793965,3793972..3793974,3794005..3794010,
+ 3794017..3794022,3794029..3794034,3794041..3794043)
+ /locus_tag="SARI_03861"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene 3794336..3795727
+ /gene="uhpT"
+ /locus_tag="SARI_03862"
+ CDS 3794336..3795727
+ /gene="uhpT"
+ /locus_tag="SARI_03862"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="protein motif:HMMTigr:IPR000849"
+ /inference="protein motif:ScanRegExp:IPR000849"
+ /inference="similar to AA sequence:REFSEQ:NP_462686.1"
+ /note="cytoplasmic membrane protein that functions as a
+ monomer; catalyzes the active transport of
+ sugar-phosphates such as glucose-6-phosphate with the
+ obligatory exchange of inorganic phosphate or
+ organophosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="sugar phosphate antiporter"
+ /protein_id="YP_001572798.1"
+ /db_xref="GI:161505686"
+ /db_xref="InterPro:IPR000849"
+ /db_xref="InterPro:IPR011701"
+ /translation="MLAFLNQVRKPTLDLPLDVRRKMWFKPFMQSYLVVFIGYLTMYL
+ IRKNFNIAQNDMISTYGLSMTELGMIGLGFSITYGVGKTLVSYYADGKNTKQFLPFML
+ ILSAICMLGFSASMGAGSTSLFLMIAFYALSGFFQSTGGSCSYSTITKWTPRRKRGTF
+ LGFWNISHNLGGAGAAGVALFGANYLFDGHVIGMFIFPSIIALIVGFIGLRFGSDSPE
+ SYGLGKAEELFGEEISEEDKETEENEMTKWQIFVEYVLKNKVIWLLCFSNIFLYVVRI
+ GIDQWSTVYAFQELKLSKEVAIQGFTLFEVGALVGTLLWGWLSDLANGRRALVACVAL
+ ALIIATLGVYQHASNQYVYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGAADGIKG
+ TFAYLIGDSFAKLGLGMIADGTPVFGLTGWAGTFAALDAAAIGCICLMAMVAVMEERK
+ IRREKKIQQVNIA"
+ misc_feature 3794339..3795718
+ /gene="uhpT"
+ /locus_tag="SARI_03862"
+ /note="sugar phosphate antiporter; Reviewed; Region: uhpT;
+ PRK09556"
+ /db_xref="CDD:236564"
+ misc_feature 3794432..3795667
+ /gene="uhpT"
+ /locus_tag="SARI_03862"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature order(3794471..3794473,3794480..3794488,3794492..3794497,
+ 3794546..3794548,3794555..3794560,3794567..3794569,
+ 3794579..3794584,3794588..3794593,3794744..3794749,
+ 3794756..3794761,3794768..3794773,3794780..3794782,
+ 3794816..3794821,3794828..3794833,3794849..3794851,
+ 3795149..3795151,3795158..3795163,3795170..3795175,
+ 3795182..3795184,3795224..3795226,3795236..3795238,
+ 3795248..3795250,3795257..3795259,3795269..3795271,
+ 3795416..3795418,3795425..3795430,3795437..3795439,
+ 3795449..3795454,3795461..3795463,3795494..3795499,
+ 3795506..3795511,3795518..3795523,3795530..3795532)
+ /gene="uhpT"
+ /locus_tag="SARI_03862"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene 3795889..3796341
+ /locus_tag="SARI_03863"
+ CDS 3795889..3796341
+ /locus_tag="SARI_03863"
+ /inference="protein motif:HMMPfam:IPR009587"
+ /inference="similar to AA sequence:INSD:AAX67613.1"
+ /note="'COG: NOG09018 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572799.1"
+ /db_xref="GI:161505687"
+ /db_xref="InterPro:IPR009587"
+ /translation="MIWLILATFVVVFIVGFRVLTSDTRRAIRRLSERLNINVVPIES
+ MIDQMGKAAGGEFLQYLHRPDELHLQNAAQVLLIWQIVIIDGGDQNLQRWHRLLQKSR
+ LAAPITDTQVRLALGFLREMEPDMQEINAFQLRYNAFFQPEEGVYWLH"
+ misc_feature 3795889..3796332
+ /locus_tag="SARI_03863"
+ /note="Protein of unknown function (DUF1198); Region:
+ DUF1198; pfam06711"
+ /db_xref="CDD:148359"
+ gene complement(3796617..3796859)
+ /locus_tag="SARI_03864"
+ CDS complement(3796617..3796859)
+ /locus_tag="SARI_03864"
+ /inference="protein motif:HMMPfam:IPR000620"
+ /inference="similar to AA sequence:REFSEQ:YP_995721.1"
+ /note="'COG: COG0697 Permeases of the drug/metabolite
+ transporter (DMT) superfamily;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572800.1"
+ /db_xref="GI:161505688"
+ /db_xref="InterPro:IPR000620"
+ /translation="MIWNNLMKKYPATEVAPLSLFVPVSGVITSYLFLDERLSVQQLI
+ SVIVVITGIFIFLNSARIIKLMNSRSNAESQKSTIR"
+ misc_feature complement(3796653..>3796856)
+ /locus_tag="SARI_03864"
+ /note="O-acetylserine/cysteine export protein;
+ Provisional; Region: PRK11453"
+ /db_xref="CDD:183142"
+ gene complement(3796877..3797533)
+ /locus_tag="SARI_03865"
+ CDS complement(3796877..3797533)
+ /locus_tag="SARI_03865"
+ /inference="protein motif:HMMPfam:IPR000620"
+ /inference="similar to AA sequence:REFSEQ:YP_995721.1"
+ /note="'COG: COG0697 Permeases of the drug/metabolite
+ transporter (DMT) superfamily;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572801.1"
+ /db_xref="GI:161505689"
+ /db_xref="InterPro:IPR000620"
+ /translation="MSKRLDLFVGFLVTVLWGANFAVIELGLRDLDPFILTFLRFTFC
+ AFPLVFFIKKPEGISLISIALYGVFFGVGLWWVVNFAMFNGLSAGLSSVFLQFSAFFT
+ IVLSCFFLGEKINKIHISGIVTAFVGLIMIIHFSEESSTIKGVFFVIIAAMSWAVCNI
+ IVKLTRPANMIAFIVWSSLFSAPAVLIMTVYVKGWGGYCQYRTISRWVLLSLFCFRHI
+ "
+ misc_feature complement(3797135..3797491)
+ /locus_tag="SARI_03865"
+ /note="EamA-like transporter family; Region: EamA;
+ pfam00892"
+ /db_xref="CDD:216178"
+ gene 3797678..3798358
+ /locus_tag="SARI_03866"
+ CDS 3797678..3798358
+ /locus_tag="SARI_03866"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572802.1"
+ /db_xref="GI:161505690"
+ /translation="MFDIQKHRHNYFYNLATVVEELIPAEICDNLTDRVNTIIAQGLV
+ DHVNHSGLGNDAVSDLGGVYNHHIFKGPDVRAHLPELNAIYHAITPLISLITCTDAIV
+ SPYSLSDINIKAYPPGGGTLGLHYDTNGITVLLFLTDNNESPLRMQINRSHPARKETW
+ TEHKKIFARKGALLVMQGRKTLHDSEPTITEQKLSVVYNFYERHDTYRHEDFDNFVYY
+ GNKPKELI"
+ misc_feature 3798005..3798283
+ /locus_tag="SARI_03866"
+ /note="2OG-Fe(II) oxygenase superfamily; Region:
+ 2OG-FeII_Oxy_3; pfam13640"
+ /db_xref="CDD:222280"
+ gene complement(3798734..3799216)
+ /locus_tag="SARI_03867"
+ CDS complement(3798734..3799216)
+ /locus_tag="SARI_03867"
+ /inference="protein motif:HMMPfam:IPR000620"
+ /inference="similar to AA sequence:INSD:AAL22623.1"
+ /note="'COG: COG0697 Permeases of the drug/metabolite
+ transporter (DMT) superfamily;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572803.1"
+ /db_xref="GI:161505691"
+ /db_xref="InterPro:IPR000620"
+ /translation="MSSQFLTMTRLLFAGLILVMFSFMHGDKIFSILKNRKDALSLLI
+ FSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFALARRTRPGILVLTAILT
+ SLIGTFLLVTHGNPTSLSISSAVLFWGIASAFAAAFYTTWPFRLIAQYGTLPAAKTGN
+ "
+ misc_feature complement(3798881..3799216)
+ /locus_tag="SARI_03867"
+ /note="EamA-like transporter family; Region: EamA;
+ cl17759"
+ /db_xref="CDD:248313"
+ gene complement(3799223..3799360)
+ /locus_tag="SARI_03868"
+ CDS complement(3799223..3799360)
+ /locus_tag="SARI_03868"
+ /inference="similar to AA sequence:REFSEQ:YP_543172.1"
+ /note="'COG: COG0697 Permeases of the drug/metabolite
+ transporter (DMT) superfamily;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572804.1"
+ /db_xref="GI:161505692"
+ /translation="MMSARPKIKQHDEEKMGSTRKGMLNVLIAAVLWGSSGACAKYIM
+ E"
+ gene 3799823..3800518
+ /locus_tag="SARI_03869"
+ CDS 3799823..3800518
+ /locus_tag="SARI_03869"
+ /inference="protein motif:HMMPfam:IPR003416"
+ /inference="similar to AA sequence:INSD:AAL22622.1"
+ /note="'KEGG: mtu:Rv1811 3.7e-38 mgtC; possible Mg2+
+ transport P-type ATPase C MgtC K07507;
+ COG: COG1285 Uncharacterized membrane protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572805.1"
+ /db_xref="GI:161505693"
+ /db_xref="InterPro:IPR003416"
+ /translation="MEERMLMFPYISNLLTAMLLGALIGAERQWRQRMAGLRTNALVA
+ TGAAVFILSSVTTSPDSPGRIAAQIVSGIGFLGAGVIMREGMNVRGLNTAATLWCSAG
+ IGVLCGLGQFKNALVATIIILCANILLREAAQRINQLPISFEEEKHYILKVTFNKEHE
+ SAVRQWLLNIVKEAEICLQGLGSVPAQEQDYKEIHAELVGHADYLKARELIISRIGDN
+ DNITAIRWSVNEQ"
+ misc_feature 3799841..3800515
+ /locus_tag="SARI_03869"
+ /note="magnesium transport protein MgtC; Provisional;
+ Region: PRK15385"
+ /db_xref="CDD:185283"
+ misc_feature 3799862..3800248
+ /locus_tag="SARI_03869"
+ /note="MgtC family; Region: MgtC; pfam02308"
+ /db_xref="CDD:111223"
+ gene 3800736..3803462
+ /locus_tag="SARI_03870"
+ CDS 3800736..3803462
+ /locus_tag="SARI_03870"
+ /inference="protein motif:HMMPanther:IPR001757"
+ /inference="protein motif:HMMPfam:IPR004014"
+ /inference="protein motif:HMMPfam:IPR005834"
+ /inference="protein motif:HMMPfam:IPR008250"
+ /inference="protein motif:HMMTigr:IPR001757"
+ /inference="protein motif:HMMTigr:IPR006415"
+ /inference="protein motif:ScanRegExp:IPR001757"
+ /note="'KEGG: stm:STM3763 0. mgtB; Mg2+ transport protein
+ K01531;
+ COG: COG0474 Cation transport ATPase;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572806.1"
+ /db_xref="GI:161505694"
+ /db_xref="InterPro:IPR001757"
+ /db_xref="InterPro:IPR004014"
+ /db_xref="InterPro:IPR005834"
+ /db_xref="InterPro:IPR006415"
+ /db_xref="InterPro:IPR008250"
+ /translation="MTDMNIENRKLNRPASENDKQHKKVFPIEAEAFHSPEQTLARLN
+ SHHQGLTTEEASERLKVYGRNEVAHEQVPPVLIQLLQAFNNPFIYVLMALAAVSFVTD
+ YWLPLRRGEETDLTGVLIILTMVSLSGLLRFWQEFRTNKAAQALKSMVRTTATVSRRG
+ PGNIGAVQEEIPIEELVPGDVVFLAAGDLVPADVRLLESRDLFISQSILSGESLPVEK
+ YDVMADVTGKDSEQLPDKDKSLLDLGNICLMGTNVTSGRAQAVVVATGNRTWFGSLAK
+ SIVGTRTQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFSKGDWVEASLFALAVAVGL
+ TPEMLPMIVSSNLAKGAIAMSRRKVIVKRLNAIQNFGAMDVLCTDKTGTLTQDNIFLE
+ HHLDVDGVKNSRVLMLAWLNSSSQSGARNVMDRAVLRFGEGRIAPSTKTRFAKLDELP
+ FDFVRRRVSVLVEDVQYGDKSLICKGAVEEMLMASTHLREGDRVVPLTETRRELLLAK
+ TEDYNAQGFRVLLVATRKLDGSAAHRPLSTEDEKELTIEGMLTFLDPPKESAGKAISA
+ LRDNGVAVKVLTGDNPVVTARICLEVGIDAHDILTGTQVEAMSDVELEAEVEKREVFA
+ RLTPLQKTRILKALQKNGHTVGFLGDGINDAPALRDADVGISVDSAADIAKESSDIIL
+ LEKDLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLL
+ IQNLMYDISQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWY
+ VFAANNVEAQALFQSGWFIEGLLSQTLVVHMLRTQKIPFIQSRATLPVLLTTGLIMAI
+ GVYIPFSPLGAMVGLEPLPLSYFPWLVATLLSYCLVAQGMKRFYIKRFGQWF"
+ misc_feature 3800748..3803459
+ /locus_tag="SARI_03870"
+ /note="magnesium-transporting ATPase; Provisional; Region:
+ PRK15122"
+ /db_xref="CDD:237914"
+ misc_feature 3800829..3801038
+ /locus_tag="SARI_03870"
+ /note="Cation transporter/ATPase, N-terminus; Region:
+ Cation_ATPase_N; smart00831"
+ /db_xref="CDD:214842"
+ misc_feature 3801093..3801839
+ /locus_tag="SARI_03870"
+ /note="E1-E2 ATPase; Region: E1-E2_ATPase; pfam00122"
+ /db_xref="CDD:215733"
+ misc_feature <3802011..3802196
+ /locus_tag="SARI_03870"
+ /note="Putative hydrolase of sodium-potassium ATPase alpha
+ subunit; Region: Hydrolase_like2; pfam13246"
+ /db_xref="CDD:222006"
+ misc_feature <3802557..3802826
+ /locus_tag="SARI_03870"
+ /note="Soluble P-type ATPase [General function prediction
+ only]; Region: COG4087"
+ /db_xref="CDD:226572"
+ misc_feature 3802926..3803432
+ /locus_tag="SARI_03870"
+ /note="Cation transporting ATPase, C-terminus; Region:
+ Cation_ATPase_C; pfam00689"
+ /db_xref="CDD:216063"
+ gene complement(3803570..3803728)
+ /locus_tag="SARI_03871"
+ CDS complement(3803570..3803728)
+ /locus_tag="SARI_03871"
+ /note="'Psort location: extracellular, including cell
+ wall, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572807.1"
+ /db_xref="GI:161505695"
+ /translation="MRFTWQTPLLFSGVCQCALSYPDSQQNQYNGYQEDLKKDFVQPS
+ FLHGITSL"
+ gene 3803774..3804289
+ /locus_tag="SARI_03872"
+ CDS 3803774..3804289
+ /locus_tag="SARI_03872"
+ /inference="similar to AA sequence:INSD:AAV79410.1"
+ /note="'COG: NOG12157 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572808.1"
+ /db_xref="GI:161505696"
+ /translation="MFIISPYPKGNIMSKRRGLTVVLATLVTFFLSATPVLANPGNGN
+ GGGHGNNAANQGNNGNGHKGNARQKTERFKNGGKPDHVESDISYAVARQLAVNLGLTG
+ YQSLPPGIAKNLARGKPLPPGIAKKRVPASMLGQLPYYPGYEWKIIGDNLVLIALSTA
+ VVTAIINGVFD"
+ gene complement(3804829..3807162)
+ /locus_tag="SARI_03873"
+ CDS complement(3804829..3807162)
+ /locus_tag="SARI_03873"
+ /inference="protein motif:HMMPfam:IPR004968"
+ /inference="protein motif:HMMPfam:IPR006171"
+ /inference="protein motif:HMMPfam:IPR013237"
+ /inference="protein motif:HMMSmart:IPR006154"
+ /inference="protein motif:HMMSmart:IPR013237"
+ /inference="protein motif:HMMTigr:IPR006500"
+ /note="'KEGG: sty:STY4832 0. Bacteriophage P4 DNA primase;
+ COG: COG4643 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572809.1"
+ /db_xref="GI:161505697"
+ /db_xref="InterPro:IPR004968"
+ /db_xref="InterPro:IPR006154"
+ /db_xref="InterPro:IPR006171"
+ /db_xref="InterPro:IPR006500"
+ /db_xref="InterPro:IPR013237"
+ /translation="MKMNVTETVKQACGHWPRILPALGVKVIKNRHQACPVCGGTDRF
+ RFDDKEGRGTWYCNQCGAGDGLKLVEKVFGVTASEAAGKVNAVTGNLPPVAPEVIAAA
+ EAETEADRKAAAALAVRLMEKTRPASGNAYLTRKGFPALECLMLTAIHKTGGVTFRAG
+ DVVVPLYDDTGALVNLQLINADGLKRTLKAGQVKGACHTIEGKKQTGKRLWITEGYAT
+ ALTVHHLTGETVMVALSSVNLLSLASLARQKHPACQIVLAADRDLNGNGQSKAAAAAD
+ ACEGVVALPPVFGDWNDAFMQHGEEATRKAIYDAIRPPADSPFTTMSEAEFTAMSTSE
+ KAMRVHEHYGEALAVDANGQLLSRYEAGIWKIIPPSDFARDVAGLFQRLRAPFSSGKI
+ ASVVETLKLIIPQQDAPARRLIGFRNGVLDTATGTFSPHHKAHWLRTLCDVDFTPPVE
+ GETLETHAPDFWRWLDRAAGGRQEKRDVILAALFMVLANRYDWQLFLEVTGPGGSGKS
+ ILAEIATMLAGEDNATSATIETLESPRERAALIGFSLIRLPDQEKWSGDGAGLKAITG
+ GDAVSVDPKYKDAYSTHIPAVILAVNNNPMRFTDRSGGVSRRRVIIHFPEQIAPEERD
+ PQLKNKIARELAVIVRQLMQKFSDPMAARTLLQSQQNSDEALSIKRDADPTFDFCGYL
+ EALPEPEGMYIGNANIIPRQPRLYLYHAYLAYMEAHGYRNTLSLTMFGKGLPAMLKEY
+ GLSYEKRRKNQGIQTNLTLREESNADWLPKCDDPIAK"
+ misc_feature complement(3806059..3807162)
+ /locus_tag="SARI_03873"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG4643"
+ /db_xref="CDD:226990"
+ misc_feature complement(3806965..3807075)
+ /locus_tag="SARI_03873"
+ /note="Zinc-binding domain of primase-helicase; Region:
+ Prim_Zn_Ribbon; smart00778"
+ /db_xref="CDD:129016"
+ misc_feature complement(3806305..3806541)
+ /locus_tag="SARI_03873"
+ /note="TOPRIM_primases: The topoisomerase-primase (TORPIM)
+ nucleotidyl transferase/hydrolase domain found in the
+ active site regions of bacterial DnaG-type primases and
+ their homologs. Primases synthesize RNA primers for the
+ initiation of DNA replication. DnaG...; Region:
+ TOPRIM_primases; cd01029"
+ /db_xref="CDD:173779"
+ misc_feature complement(order(3806371..3806373,3806377..3806379,
+ 3806383..3806385,3806509..3806511,3806518..3806523))
+ /locus_tag="SARI_03873"
+ /note="active site"
+ /db_xref="CDD:173779"
+ misc_feature complement(order(3806383..3806385,3806521..3806523))
+ /locus_tag="SARI_03873"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:173779"
+ misc_feature complement(order(3806461..3806463,3806491..3806496,
+ 3806512..3806517))
+ /locus_tag="SARI_03873"
+ /note="interdomain interaction site; other site"
+ /db_xref="CDD:173779"
+ misc_feature complement(3805777..3806157)
+ /locus_tag="SARI_03873"
+ /note="D5 N terminal like; Region: D5_N; smart00885"
+ /db_xref="CDD:197953"
+ misc_feature complement(3805003..3805929)
+ /locus_tag="SARI_03873"
+ /note="phage/plasmid primase, P4 family, C-terminal
+ domain; Region: primase_Cterm; TIGR01613"
+ /db_xref="CDD:130674"
+ misc_feature complement(3804856..3805152)
+ /locus_tag="SARI_03873"
+ /note="Poxvirus D5 protein-like; Region: Pox_D5;
+ pfam03288"
+ /db_xref="CDD:146095"
+ gene complement(3807177..3807497)
+ /locus_tag="SARI_03874"
+ CDS complement(3807177..3807497)
+ /locus_tag="SARI_03874"
+ /inference="similar to AA sequence:REFSEQ:YP_153341.1"
+ /note="'COG: NOG29857 non supervised orthologous group;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572810.1"
+ /db_xref="GI:161505698"
+ /translation="MKQPLPPVLRAALYRRAVACAWLTLCERQHRYPHLTLDALESAI
+ AAELEGFYLRQHGEEKGRQIACALLEDLMEAGPLKAAPSLSFLGLAVMDELCARHITA
+ PVLH"
+ gene complement(3807494..3807754)
+ /locus_tag="SARI_03875"
+ CDS complement(3807494..3807754)
+ /locus_tag="SARI_03875"
+ /inference="similar to AA sequence:INSD:CAD06952.1"
+ /note="'COG: NOG32339 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572811.1"
+ /db_xref="GI:161505699"
+ /translation="MPVYSTERPQNKHQPAISRADLECLEHLRNVGQLVGDLMQVQDC
+ TTVRRDPVQQSQLTSVIYLMTAQLDGVVERCNQRWLTGEGNV"
+ gene complement(3807827..3808276)
+ /locus_tag="SARI_03876"
+ CDS complement(3807827..3808276)
+ /locus_tag="SARI_03876"
+ /inference="similar to AA sequence:REFSEQ:ZP_00718600.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572812.1"
+ /db_xref="GI:161505700"
+ /translation="MFDFPQSGEIYRCTGFSDVVVVGILAAGIPWDMPYRCPELVWNP
+ YRRAYSILVRIKNDGRITEIPLGRFLQEFTCVKPDLFKRCRENRYAVLKEITFDPELQ
+ KWRAKNIDIYPEDITPSRRPIPTTRRWRDIPRTEPEIKPDNSYRHYL"
+ gene complement(3808269..3808568)
+ /locus_tag="SARI_03877"
+ CDS complement(3808269..3808568)
+ /locus_tag="SARI_03877"
+ /inference="similar to AA sequence:REFSEQ:NP_806364.1"
+ /note="'COG: NOG06294 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572813.1"
+ /db_xref="GI:161505701"
+ /translation="MHTENSIQTVSARRDDLNTLREHLSIEAYHKLNRASAITQFVGL
+ DLEQRELTGLHQLCMPHIFSYLHDDISFVLEELKGKGLCRDFLTQQGLREEEDHV"
+ gene complement(3808558..3809160)
+ /locus_tag="SARI_03878"
+ CDS complement(3808558..3809160)
+ /locus_tag="SARI_03878"
+ /inference="similar to AA sequence:REFSEQ:ZP_01700149.1"
+ /note="'COG: NOG20798 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572814.1"
+ /db_xref="GI:161505702"
+ /translation="MNQSHFHKAPFSGLHLLYVSWYSFAVAAKSATGRENPSNPSAIP
+ DAPCVFFCVAINATERQIMVWCADIRAGVTLRLLPVFVHYAVMSMVAQAGQPSGWPVF
+ DGAGILTPVWAIATERENSGDSNYQLSIGGCLMATTLTPSHPEFIFVFAAVRRTERKP
+ HICMLRTVAGDEHTARRSLVRDYVLSLAARLPLAEVSHAH"
+ misc_feature complement(3808723..3809097)
+ /locus_tag="SARI_03878"
+ /note="Ash protein family; Region: Phage_ASH; pfam10554"
+ /db_xref="CDD:151096"
+ gene complement(3809157..3809375)
+ /locus_tag="SARI_03879"
+ CDS complement(3809157..3809375)
+ /locus_tag="SARI_03879"
+ /inference="protein motif:HMMPfam:IPR010260"
+ /inference="protein motif:superfamily:IPR009061"
+ /inference="similar to AA sequence:REFSEQ:YP_001177821.1"
+ /note="'COG: COG3311 Predicted transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572815.1"
+ /db_xref="GI:161505703"
+ /db_xref="InterPro:IPR009061"
+ /db_xref="InterPro:IPR010260"
+ /translation="MPVSAPAQERFLRLPEVIHQCGLSRSTLYDLIARNAFPAQVSLG
+ GKNVAWLQSEITAWMEERVAHRNRKYDA"
+ misc_feature complement(3809172..3809372)
+ /locus_tag="SARI_03879"
+ /note="Predicted transcriptional regulator
+ [Transcription]; Region: AlpA; COG3311"
+ /db_xref="CDD:225848"
+ gene complement(3809765..3809917)
+ /locus_tag="SARI_03881"
+ CDS complement(3809765..3809917)
+ /locus_tag="SARI_03881"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572816.1"
+ /db_xref="GI:161505705"
+ /translation="MPLWQKWHKQTLKPGWPEKGLRRTLLTVCFFTYNYSLLFTEKKK
+ ISNTVR"
+ gene 3809917..3810720
+ /locus_tag="SARI_03880"
+ CDS 3809917..3810720
+ /locus_tag="SARI_03880"
+ /inference="similar to AA sequence:INSD:ABP61769.1"
+ /note="'COG: NOG23022 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572817.1"
+ /db_xref="GI:161505704"
+ /translation="MNRVVVSGAAESPQIETKRRPDMTQTAVIPDYLKPAMERLETAR
+ SAHLANASRMDETTTAISQVQTQKNELEQENGNDSGAWRAAFRAGGAVITDELKQRHL
+ ARVARRELAQECDNMAEVLSFELDRLKGACDRTARAYRQAHHGVLSQYAEHELDAALR
+ ESCGALIRAMKLNILVLNNRLANTTGHQGYTEPEKVVMQQVKAWLEQAVKGCNIRLTD
+ EPVLFKTGLSASTLPHMEHDVAATPGQRKVWQEKMREREADLKARGLLS"
+ gene 3810717..3810962
+ /locus_tag="SARI_03882"
+ CDS 3810717..3810962
+ /locus_tag="SARI_03882"
+ /inference="protein motif:HMMPfam:IPR007684"
+ /inference="similar to AA sequence:REFSEQ:YP_153338.1"
+ /note="'COG: NOG23021 non supervised orthologous group;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572818.1"
+ /db_xref="GI:161505706"
+ /db_xref="InterPro:IPR007684"
+ /translation="MMRCPFCRTAAHVRTSRYMSDSVKESYLQCQNVHCSATFKTHES
+ IFEVIRSPVVDEKPAPVPTAPVAPRRVKGCYSSPFRH"
+ misc_feature 3810723..3810863
+ /locus_tag="SARI_03882"
+ /note="Ogr/Delta-like zinc finger; Region: Ogr_Delta;
+ pfam04606"
+ /db_xref="CDD:203053"
+ gene 3810979..3811545
+ /locus_tag="SARI_03883"
+ CDS 3810979..3811545
+ /locus_tag="SARI_03883"
+ /inference="protein motif:HMMPfam:IPR010006"
+ /inference="similar to AA sequence:REFSEQ:YP_153337.1"
+ /note="'COG: NOG18557 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572819.1"
+ /db_xref="GI:161505707"
+ /db_xref="InterPro:IPR010006"
+ /translation="MTTLTLQQAYDACQTNKTAWLNRKTELAAAMQEYQELLLDDNAS
+ GSRRLQTLRDLIDVKKWEVNQAAGRYIFSHEEVQRISIRNRLHDFMQQNGAELTAALA
+ PELMGIKNQPAMIKNRALDRSVSYLREALSVWLTAGNEINYSVQDNDILTAIGYRPDA
+ PSRDDNREKFTPAQNMIYTRRRAELAAQ"
+ misc_feature 3810979..3811542
+ /locus_tag="SARI_03883"
+ /note="Phage polarity suppression protein (Psu); Region:
+ Psu; pfam07455"
+ /db_xref="CDD:148834"
+ gene complement(3811744..3813243)
+ /locus_tag="SARI_03884"
+ CDS complement(3811744..3813243)
+ /locus_tag="SARI_03884"
+ /inference="protein motif:HMMPfam:IPR000477"
+ /inference="similar to AA sequence:REFSEQ:ZP_01289999.1"
+ /note="'KEGG: fnu:FN0161 3.7e-38 RNA-directed DNA
+ polymerase K00986;
+ COG: COG3344 Retron-type reverse transcriptase;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572820.1"
+ /db_xref="GI:161505708"
+ /db_xref="InterPro:IPR000477"
+ /translation="MEESTNYKLLVWGLSVIQPATPNEVLNYLTSTLNDNGLLPDIEK
+ MIHYFELLDQLGYIHQVSKRNNLYSLTPRGNERLTPALKRLRDKIRLFMLDNCHSTSK
+ LGVLASTDTENMGGDSPSLQLRHNLKEVPHPSLSWAAGTLPSSPRQAWVRIYEQLNIG
+ SMSSDEASTPTTARNAPLSSVGRLGFSLNYYSFNKIDEPLFNNDGVTAISSCIGISPG
+ LITAMIKSPKRYYRTFNLRKKSGGFRPILAPRKFIKTIQYWLKDHVLNRLKIHSSCYS
+ YRSGVSIKDNAINHIKKKFVANIDISDYFGSINKKMVKDCFYKNNIPEHVINTISGIV
+ TYNDVLPQGAPTSPIISNAILFEFDEEMSFHALTLDCIYTRYSDDISISSDDKENIAI
+ LINIAEANLLSAGFTLNRQKQRIASDNSRQVVTGILVNESIRPTRCYRKKIRSAFDHA
+ LKEQDGSQLTINKLRGYLNYLKSFEPYGFTFNEKKYKETLDFLITLKQS"
+ misc_feature complement(3811906..3812532)
+ /locus_tag="SARI_03884"
+ /note="RT_Bac_retron_II: Reverse transcriptases (RTs) in
+ bacterial retrotransposons or retrons. The polymerase
+ reaction of this enzyme leads to the production of a
+ unique RNA-DNA complex called msDNA (multicopy
+ single-stranded (ss)DNA) in which a small ssDNA...;
+ Region: RT_Bac_retron_II; cd03487"
+ /db_xref="CDD:239569"
+ misc_feature complement(3811975..3812532)
+ /locus_tag="SARI_03884"
+ /note="Reverse transcriptase (RNA-dependent DNA
+ polymerase); Region: RVT_1; pfam00078"
+ /db_xref="CDD:215698"
+ misc_feature complement(order(3811966..3811971,3812107..3812112,
+ 3812116..3812118,3812215..3812220,3812329..3812346))
+ /locus_tag="SARI_03884"
+ /note="putative active site [active]"
+ /db_xref="CDD:239569"
+ misc_feature complement(order(3812110..3812112,3812218..3812220,
+ 3812329..3812346))
+ /locus_tag="SARI_03884"
+ /note="putative NTP binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:239569"
+ misc_feature complement(3812215..3812217)
+ /locus_tag="SARI_03884"
+ /note="putative nucleic acid binding site [nucleotide
+ binding]; other site"
+ /db_xref="CDD:239569"
+ gene complement(3813245..3813919)
+ /locus_tag="SARI_03885"
+ CDS complement(3813245..3813919)
+ /locus_tag="SARI_03885"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572821.1"
+ /db_xref="GI:161505709"
+ /translation="MENNNPQNVDQKIKSTVVGANNTTIIAQVIVNASNPHIDVNAIQ
+ NSLIKEIRSSLKEEFVSTEYNILLCYPNKIIRDEPTIRIIEELKQKLNDMGAIVYEGG
+ GKAALPKTQIMYPHLAELEFIKTVKCDTVIIFALDEVTLSQLTLISYFKVSKKIDTTD
+ MIIISSDDLKNSDVFLSNGTFQYCDDNNCKLYSLSSLDDAGLNSVISRIENKKIIQRK
+ GGLLGD"
+ gene complement(3813909..3814100)
+ /locus_tag="SARI_03886"
+ CDS complement(3813909..3814100)
+ /locus_tag="SARI_03886"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572822.1"
+ /db_xref="GI:161505710"
+ /translation="MTWLHNNAEWVFSGIGVYVISLVVLIITALVFRKKIKAGVQKIA
+ KVFVFGWGNTTNINQDDGK"
+ misc_feature complement(<3813984..3814058)
+ /locus_tag="SARI_03886"
+ /note="Ferrous iron transport protein B C terminus;
+ Region: FeoB_C; pfam07664"
+ /db_xref="CDD:203715"
+ gene complement(3814110..3815276)
+ /locus_tag="SARI_03887"
+ CDS complement(3814110..3815276)
+ /locus_tag="SARI_03887"
+ /inference="protein motif:Gene3D:IPR013762"
+ /inference="protein motif:HMMPfam:IPR002104"
+ /inference="protein motif:superfamily:IPR010998"
+ /inference="protein motif:superfamily:IPR011010"
+ /inference="similar to AA sequence:INSD:EAY47615.1"
+ /note="'COG: COG0582 Integrase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572823.1"
+ /db_xref="GI:161505711"
+ /db_xref="InterPro:IPR002104"
+ /db_xref="InterPro:IPR010998"
+ /db_xref="InterPro:IPR011010"
+ /db_xref="InterPro:IPR013762"
+ /translation="MALTDIQIKRAKPQDKPYTLNDGQGLSLLINPDGSKGWRFRFRF
+ AGKARLMSFGSYDLVSLAEAREKRDAARKQVANGIDPVEERKALKLAQKLSTENSFES
+ VSREWHSTKADRWTVAYREEIIKTFEQDVFPFIGKRPIGEIKPLELLEVLRRIEKRGA
+ LEKTRKVRQRCGEVFRYAIITGRAEYNPAPDLAIALAVPKQKHHPFLSAEELPHFIRD
+ LEAYTGSIITKNATKIVMLTGVRTQEMRFATWDEVNLEKGIWEIPAERMKMRRPHIVP
+ LSTQVIDLFKQLKPITGHYPYIFIGRNNRSKPISKESVSQVIELLGYKGRATGHGFRH
+ TMSTILHEQGFDSAWIEIQLAHTDKNAIRGTYNHAIYLENRRIMLQWYSDNLIT"
+ misc_feature complement(3814125..3815270)
+ /locus_tag="SARI_03887"
+ /note="integrase; Provisional; Region: PRK09692"
+ /db_xref="CDD:170049"
+ misc_feature complement(3814125..3815198)
+ /locus_tag="SARI_03887"
+ /note="Bacteriophage P4 integrase. P4-like integrases are
+ found in temperate bacteriophages, integrative plasmids,
+ pathogenicity and symbiosis islands, and other mobile
+ genetic elements. They share the same fold in their
+ catalytic domain and the overall...; Region: INT_P4;
+ cd00801"
+ /db_xref="CDD:238416"
+ misc_feature complement(order(3814179..3814181,3814209..3814211,
+ 3814278..3814280,3814287..3814289,3814473..3814475,
+ 3814554..3814556))
+ /locus_tag="SARI_03887"
+ /note="active site"
+ /db_xref="CDD:238416"
+ misc_feature complement(order(3814179..3814181,3814209..3814211,
+ 3814278..3814280,3814287..3814289,3814473..3814475,
+ 3814554..3814556))
+ /locus_tag="SARI_03887"
+ /note="Int/Topo IB signature motif; other site"
+ /db_xref="CDD:238416"
+ gene 3815421..3815570
+ /locus_tag="SARI_03888"
+ CDS 3815421..3815570
+ /locus_tag="SARI_03888"
+ /inference="similar to AA sequence:REFSEQ:YP_218662.1"
+ /note="'COG: COG2963 Transposase and inactivated
+ derivatives;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572824.1"
+ /db_xref="GI:161505712"
+ /translation="MGEEELWRKITGVEPARNRWRPQLDLKSSRLTGDDDLPHLDCYM
+ EARAL"
+ gene 3815821..3817203
+ /locus_tag="SARI_03889"
+ CDS 3815821..3817203
+ /locus_tag="SARI_03889"
+ /inference="protein motif:HMMTigr:IPR001927"
+ /inference="protein motif:ScanRegExp:IPR001927"
+ /inference="similar to AA sequence:REFSEQ:YP_152713.1"
+ /note="may be involved in the transport of
+ galactosides-pentoses-hexuronides"
+ /codon_start=1
+ /transl_table=11
+ /product="putative transporter"
+ /protein_id="YP_001572825.1"
+ /db_xref="GI:161505713"
+ /db_xref="InterPro:IPR001927"
+ /translation="MKSEILSVKEKVGYGMGDAASHIVFDNVMLYMMFFYTDIFGIPA
+ GFVGTMFLLARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPD
+ LSLNGKMIYAVITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGM
+ LSTVLMMPLVKLIGGENKALGFQGGIAVLSVVAFLMLAFCFFTTKERVEAPATHTSMR
+ EDLRDIWHNDQWRIVGLLTILNILAVCVRGGAMMYYVTWILGKPGVFVVFLTTYCVGN
+ LFGSALAKPLTDWKCKVSVFWWTNALLAVISAAMFFVPMHATIAMFVFIFVIGVLHQL
+ VTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAGGGYNA
+ AAKTQNSATISIIIALFTLVPAICYLLSAAIAKRYYTLKSPFLKAILEQLAQGAHRKE
+ QEVTHKELQN"
+ misc_feature 3815821..3817200
+ /locus_tag="SARI_03889"
+ /note="putative transporter; Provisional; Region:
+ PRK11462"
+ /db_xref="CDD:183145"
+ misc_feature 3815821..3817197
+ /locus_tag="SARI_03889"
+ /note="Na+/melibiose symporter and related transporters
+ [Carbohydrate transport and metabolism]; Region: MelB;
+ COG2211"
+ /db_xref="CDD:225121"
+ gene 3817215..3819533
+ /locus_tag="SARI_03890"
+ CDS 3817215..3819533
+ /locus_tag="SARI_03890"
+ /inference="protein motif:HMMPfam:IPR000322"
+ /note="'catalyzes the transfer of alpha-xylosyl residue
+ from alpha-xyloside to xylose, glucose, mannose, fructose,
+ maltose, isomaltose, nigerose, kojibiose, sucrose, and
+ trehalose; shows higher activity against alpha-xylosyl
+ fluoride, isoprimeverose
+ (6-O-alpha-xylopyranosyl-glucopyranose), and
+ alpha-xyloside in xyloglucan oligosaccharides'"
+ /codon_start=1
+ /transl_table=11
+ /product="alpha-xylosidase YicI"
+ /protein_id="YP_001572826.1"
+ /db_xref="GI:161505714"
+ /db_xref="InterPro:IPR000322"
+ /translation="MKISDGNWLIQPGLNLIHPVQVFDVEQQGNEMVVYAAPRDVRER
+ TWQLDTPLFTLRFFSPQEGVIGVRMEHFQGALDNGPYYPLNILQDIKVEMQNNAEFAE
+ LKSGSLSVRVIKGEFWSLDFLRNGVRITGSQLKNNGYVQDSNSGRNYMFERLDLGVGE
+ TVYGLGERFTALVRNGQTVDTWNRDGGTSTEQSYKNIPFYLTNRGYGVLVNHPQCVSF
+ EIGSEKVSKVQFSVESEYLEYFVIDGPTPKAVLNRYTQFTGRPALPPAWSFGLWLTTS
+ FTTNYDEATVNRFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDPVTFPDPQGMIRR
+ LKAKGMKVCVWINPYIGQKSPVFRELKEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNP
+ EACEWYTNKLKGLVDIGVDCFKTDFGERIPTDVQWFDGADPQKMHNHYAYIYNELVWN
+ VLKDTVGEDNAVLFARSASVGAQQFPVHWGGDCYANYESMAESLRGGLSIGLSGFGFW
+ SHDIGGFENTAPAHVYKRWCAFGLLSSHSRLHGSKSYRVPWAYDEESCDVVRYFTEQK
+ CRMMPYLYREAARANEAGTPMMRAMMLEFPDDPACDYLDRQYMLGDAVMVAPVFSEAG
+ DVQFYLPQGRWTHLWRNDEVQGSRWHKQQHDFLSLPVYVRDNTLLALGNNSQKPDYAW
+ HEGTEFQLFHLEDGREAICEVPAADSSVIFTLKVARVGNTFNVKGKGEARNWTLCLRN
+ IAQISGVEGGSYSSSEWGIVVKTQKNEVVIHL"
+ misc_feature 3817215..3819212
+ /locus_tag="SARI_03890"
+ /note="putative alpha-glucosidase; Provisional; Region:
+ PRK10658"
+ /db_xref="CDD:236731"
+ misc_feature 3817689..3817871
+ /locus_tag="SARI_03890"
+ /note="Galactose mutarotase-like; Region: Gal_mutarotas_2;
+ pfam13802"
+ /db_xref="CDD:222390"
+ misc_feature 3817989..3818921
+ /locus_tag="SARI_03890"
+ /note="YicI alpha-xylosidase is a glycosyl hydrolase
+ family 31 (GH31) enzyme that catalyzes the release of an
+ alpha-xylosyl residue from the non-reducing end of
+ alpha-xyloside substrates such as alpha-xylosyl fluoride
+ and isoprimeverose. YicI forms a...; Region:
+ GH31_xylosidase_YicI; cd06593"
+ /db_xref="CDD:133124"
+ misc_feature order(3818130..3818132,3818247..3818249,3818454..3818456,
+ 3818460..3818465,3818610..3818612,3818649..3818651,
+ 3818658..3818660,3818757..3818759,3818835..3818837)
+ /locus_tag="SARI_03890"
+ /note="active site"
+ /db_xref="CDD:133124"
+ misc_feature order(3818148..3818153,3818268..3818273,3818295..3818297,
+ 3818334..3818336,3818340..3818342)
+ /locus_tag="SARI_03890"
+ /note="homotrimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:133124"
+ misc_feature order(3818460..3818462,3818658..3818660)
+ /locus_tag="SARI_03890"
+ /note="catalytic site [active]"
+ /db_xref="CDD:133124"
+ misc_feature order(3818664..3818666,3818673..3818675,3818688..3818690)
+ /locus_tag="SARI_03890"
+ /note="homohexamer (dimer of homotrimers) interface
+ [polypeptide binding]; other site"
+ /db_xref="CDD:133124"
+ gene complement(3819605..3825043)
+ /locus_tag="SARI_03891"
+ CDS complement(3819605..3825043)
+ /locus_tag="SARI_03891"
+ /inference="protein motif:HMMPfam:IPR003344"
+ /inference="protein motif:HMMSmart:IPR003344"
+ /inference="protein motif:superfamily:IPR008964"
+ /inference="similar to AA sequence:REFSEQ:YP_001005042.1"
+ /note="'KEGG: sce:YIR019C 2.2e-29 MUC1; Required for
+ invasion and pseudohyphae formation in response to
+ nitrogen starvation K01178;
+ COG: COG5295 Autotransporter adhesin;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572827.1"
+ /db_xref="GI:161505715"
+ /db_xref="InterPro:IPR003344"
+ /db_xref="InterPro:IPR008964"
+ /translation="MRIYLRLTAYFQLVIQVIFLFVNSFIFSFPAHAATNPDTNQKKP
+ TTEITAQSTAKKEEDEAGKNLAAILSSTGSMLSQDNKTDALINSAINNGSAYVTGQIQ
+ QWLQQFGTAKVNLGLDKDLSLDNASLDLLLPLYDDKKQNLLFTQWGGRRDDDRNIINV
+ GMGYRYFADRWMWGINTFYDRQISDNAHERLGIGGELGWNYFKLSANGYKRLSGWKDS
+ SEYEDYQERVANGYDIRAEGYLPAWPQLGAQLVWEQYYGDDVALFDDSEDDRQRNPYA
+ VTAGVNYTPFPLVSIGLNQKMGKGNHNDTQIDLAVNWMLGSSLKSQLDSDAVKARRTL
+ LGSRLDLINRNNNIVLEYRKQDLISLKVQNKVTGTESETLPVSVNVKSKYPLDHISWE
+ DDNLVKNGGKISENNGSWSVTLPHYQQNSGEKNLYVVSATAWDNQGNKSNASHMTVEV
+ SGFDLHQITSATTTTSATLPADGVSTTQVTVTVTSGNGVKITGLANDLSAQLMRSNSS
+ KGLAADTVQEKISAFKEQSPGVYVSTFTSGTLAGVVTVQPYYNQTSKLSSTTITLTPV
+ SDTARFATLSASKTAALANARDVITLTAHVVDAANNSLQGVAVHWATVNPKAVLSAST
+ SNTDAQGNATVSLTSSEIMSTTVSAQLDNGQKLDSETLQFTADSSSATVTGVEVDKKV
+ ARADGQDTITVQATVMDAEQHPLANQPVDWAIRSAASSTHLSDKQSNTNENGVATITL
+ TSAKAGQGIVTASTGNSEPVESETLTFMPDVKSATLSAITADKTAAQANGADAVTLSV
+ KVEDANHNPIPGAQISWTTTSATAILSASDTSTDAKGNASISVTSTTVENVSVVATMK
+ EQAQTSPDLQFTVDNATAAVESLNADKTQAVANQNDFITLTARVVDANDHPVPDSPLK
+ WQIVEGQATLSATQTTTDQQGSGSITLTSSTQGNVVVSVSATAGDAVNSPALLFIADT
+ ATAKVSDITVDKSQGVANGNDHITYTAIVTDASGNPVKDQEVTWNATPATANLSSATS
+ TTDSNGNTSVTITTLKAGSVNVTAQAGASPAWNAPTTTFVGDKATAQILDLKTNKSTA
+ LANGTDSITFTGTVIDANNNVLEGVNVAWAVTPTTGVLSTTTSASGSDGKASVSLTSS
+ QVESYQVTATVNGKDETSGNVSFTADSASASLTSLTSDETSNLIAGNGSATLTAVVQD
+ ATGHPIAGAVVNWSSDNTTGNFSETTSTTNSEGKAIVTFSGTHAQLTTITASSVNNSQ
+ KTVQVTIAPDTQSAQPVTVVADKHGAIANGADTVTLTATIQDQYGNFINQGDVAWTIS
+ PEASYHLSANNQPTNNEGQSIVTLASDDVVSCKGTATFNGLSKSTATIRFTADTTTEK
+ VDTLNASKTENVVAGKDTITLEATVTDENGHPVADTTVHWGTDNSSGTFQPGDSSVTD
+ SNGVATVTYSATKAVPTLIGAGINQSEKTITVNYIGNADTAKLSNIKPDKTKAVADNT
+ ELVTWSVDVKDANGNILPGISVNWSSDDPDLTLAASSSVTNEHGVATITGRTLKARDA
+ VVKATLSAGGQMLSAAKVTFIGDAKTAMLMSLNVDKFNVLANGGDAATYTAYVEDINH
+ NIVPDATVSWRTTMNKLSSGTSKTNSSGKATVKLSGNSVGMVTVTATINNSSMSKSGV
+ KFINVIEDTWYVKSGSSTYTSSAIKGYPDLGFVVASPTTGPTYLEWSPTGTSKVTTPV
+ TLIDDAGQQYTVNLKGNRTSDCSTRPLNAAVGCSSSAGYKAQFTWNINDNKSIPPGHY
+ TGLIHFYGKDWHTAWAFEYRLTMDLTIN"
+ misc_feature complement(3824006..3824857)
+ /locus_tag="SARI_03891"
+ /note="Protein of unknown function (DUF3442); Region:
+ DUF3442; pfam11924"
+ /db_xref="CDD:221317"
+ misc_feature complement(3823079..3823282)
+ /locus_tag="SARI_03891"
+ /note="Bacterial Ig-like domain (group 1); Region: Big_1;
+ cl17740"
+ /db_xref="CDD:248294"
+ misc_feature complement(3822776..3823030)
+ /locus_tag="SARI_03891"
+ /note="Bacterial Ig-like domain (group 1); Region: BID_1;
+ smart00634"
+ /db_xref="CDD:214751"
+ misc_feature complement(3822155..3822421)
+ /locus_tag="SARI_03891"
+ /note="Bacterial Ig-like domain (group 1); Region: BID_1;
+ smart00634"
+ /db_xref="CDD:214751"
+ misc_feature complement(3821873..3822118)
+ /locus_tag="SARI_03891"
+ /note="Bacterial Ig-like domain (group 1); Region: Big_1;
+ cl17740"
+ /db_xref="CDD:248294"
+ misc_feature complement(3821567..3821812)
+ /locus_tag="SARI_03891"
+ /note="Bacterial Ig-like domain (group 1); Region: Big_1;
+ cl17740"
+ /db_xref="CDD:248294"
+ misc_feature complement(<3821006..3821209)
+ /locus_tag="SARI_03891"
+ /note="Bacterial Ig-like domain (group 1); Region: Big_1;
+ cl17740"
+ /db_xref="CDD:248294"
+ misc_feature complement(<3820694..3820912)
+ /locus_tag="SARI_03891"
+ /note="Bacterial Ig-like domain (group 1); Region: BID_1;
+ smart00634"
+ /db_xref="CDD:214751"
+ misc_feature complement(3820343..3820612)
+ /locus_tag="SARI_03891"
+ /note="Bacterial Ig-like domain (group 1); Region: BID_1;
+ smart00634"
+ /db_xref="CDD:214751"
+ misc_feature complement(3820046..3820300)
+ /locus_tag="SARI_03891"
+ /note="Bacterial Ig-like domain (group 1); Region: Big_1;
+ cl17740"
+ /db_xref="CDD:248294"
+ gene complement(3825290..3826981)
+ /locus_tag="SARI_03892"
+ CDS complement(3825290..3826981)
+ /locus_tag="SARI_03892"
+ /inference="protein motif:HMMPfam:IPR007844"
+ /inference="similar to AA sequence:REFSEQ:YP_152712.1"
+ /note="'COG: NOG06061 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572828.1"
+ /db_xref="GI:161505716"
+ /db_xref="InterPro:IPR007844"
+ /translation="MKLIGRLLLYVLIACLVVIFGFYFLLQTRWGADRVSNWVSENSD
+ YHLTFDVMDHHFSAPSHLLLENVTFGRDGQPATLVAKTVDIGLSIRQLTAPLHVDTIL
+ LQDGTLNISVQTAPFPFEADRLQLRNMALNSPSSDWRLSAQRVNGGIMPWRPEAGQVL
+ GNKAEIQLSAGSLTLNDVPATNVLIEGSIDHNQVMLNTVGADMARGALTGVARRNADG
+ SWVVENLRLNDIRLQSDKSLSEFLAPLTTIPSLQIGRLEVTDASLQGPDWAVTDLDLS
+ LRNLTLRKEDWQSQEGKLSMNASEFIYGSLHFLDPILNAEFSPQGVALRQFTTRWEGG
+ MVRTSGNWLRDGKALVLDDTAIVGLEYTLPDNWKQQWMSPLPEWLHNVTLTKFSLSRN
+ LVIDIDPGFPWQLTALDGYGANLQLAKDRQWGIWSGIVTLNAAAGTFNRVDVRRPSVS
+ LSANSSLINISELSAFTEKGILEATASISQLPQRQTQVSLNGRGVPVNILQQWGWPAL
+ PISGDGNIQLTATGNIQAETPLKPTVNGNIKAVNMDKQQVVQILQGGIVETNSSH"
+ misc_feature complement(3825347..3826981)
+ /locus_tag="SARI_03892"
+ /note="AsmA family; Region: AsmA; pfam05170"
+ /db_xref="CDD:218477"
+ misc_feature complement(<3825998..3826234)
+ /locus_tag="SARI_03892"
+ /note="Domain of Unknown Function (DUF748); Region:
+ DUF748; pfam05359"
+ /db_xref="CDD:218568"
+ gene complement(3827102..3828502)
+ /locus_tag="SARI_03893"
+ CDS complement(3827102..3828502)
+ /locus_tag="SARI_03893"
+ /inference="protein motif:HMMPfam:IPR006043"
+ /inference="protein motif:HMMTigr:IPR006042"
+ /inference="protein motif:ScanRegExp:IPR006042"
+ /inference="similar to AA sequence:INSD:AAO71255.1"
+ /note="'KEGG: hpa:HPAG1_1114 0.00018 hypothetical protein
+ K00760;
+ COG: COG2233 XanTHIne/uracil permeases;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572829.1"
+ /db_xref="GI:161505717"
+ /db_xref="InterPro:IPR006042"
+ /db_xref="InterPro:IPR006043"
+ /translation="MCLMSVNAIESADAQPVAQTQNNELIYRLEDRPPLPQTFFAACQ
+ HLLAMFVAVITPALLICQALGLPAQDTQHIISMSLFASGVASIIQIKAWGPVGSGLLS
+ IQGTSFNFVAPLIMGGTALKTGGADVPTMMAALFGTLMLASCTEMVLSRILHLARRII
+ TPLVSGVVVMIIGLSLIQVGLTSIGGGYAAMSDNTFGAPKNLLLAGVVLAIIILLNRQ
+ RNPYLRVASLVIAMAAGYLLAWFMGMLPENNAPISQDLIIVPTPLYYGLSIDWNLLLP
+ LMLVFMITSLETIGDITATSDVSEQPVSGPLYMKRLKGGVLANGLNSFVSAVFNTFPN
+ SCFGQNNGVIQLTGVASRYVGFVVALMLIVLGLFPAVSGFVQHIPEPVLGGATLVMFG
+ TIAASGVRIVSREPLNRRAILIIALSLAVGLGVSQQPQILQFAPEWVKNLLSSGIAAG
+ GITAIVLNLILPPEKP"
+ misc_feature complement(3827105..3828439)
+ /locus_tag="SARI_03893"
+ /note="Xanthine/uracil permeases [Nucleotide transport and
+ metabolism]; Region: UraA; COG2233"
+ /db_xref="CDD:225142"
+ gene 3828721..3829926
+ /locus_tag="SARI_03894"
+ CDS 3828721..3829926
+ /locus_tag="SARI_03894"
+ /inference="protein motif:BlastProDom:IPR004445"
+ /inference="protein motif:HMMPfam:IPR004445"
+ /inference="protein motif:HMMTigr:IPR004445"
+ /inference="similar to AA sequence:REFSEQ:YP_152710.1"
+ /note="'KEGG: bxe:Bxe_A4149 0.0087 cytochrome bd ubiquinol
+ oxidase, subunit II K00426;
+ COG: COG0786 Na+/glutamate symporter;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572830.1"
+ /db_xref="GI:161505718"
+ /db_xref="InterPro:IPR004445"
+ /translation="MFELDTLSTLVAATLVLLLGRKLVQSVSLLKKYTIPEPVAGGLL
+ VAIALLVLKKSVGWEVNFDMTLRDPLMLAFFATIGLNANLASLRKGGRVVGVFLIVVV
+ GLLLMQNAIGIGMASLLGLDPLMGLIAGSITLSGGHGTGAAWSKLFIERYGFANATEV
+ AMACATFGLVLGGLIGGPVARYLVKHSTTPDGMPDDQAVPTAFEKPDVGRMITSLVLI
+ ETIALIAICLTVGKIVAQLLAGTVLELPVFVCVLFVGVILSNGLALAGFYRVFERAVS
+ VLGNVSLSLFLAMALMSLKLWELASLALPMLAILVVQTIFMALYAIFVTWRMMGKNYD
+ AAVLAAGHCGFGLGATPTAIANMQAITDRFGPSHMAFLVVPMVGAFFIDIVNALVIKL
+ YLLLPIFAQ"
+ misc_feature 3828778..3829914
+ /locus_tag="SARI_03894"
+ /note="sodium--glutamate symport carrier (gltS); Region:
+ gltS; TIGR00210"
+ /db_xref="CDD:129314"
+ gene complement(3829962..3832043)
+ /locus_tag="SARI_03895"
+ CDS complement(3829962..3832043)
+ /locus_tag="SARI_03895"
+ /inference="protein motif:HMMPfam:IPR001650"
+ /inference="protein motif:HMMPfam:IPR004365"
+ /inference="protein motif:HMMPfam:IPR011545"
+ /inference="protein motif:HMMSmart:IPR001650"
+ /inference="protein motif:HMMSmart:IPR014001"
+ /inference="protein motif:HMMTigr:IPR004609"
+ /inference="protein motif:superfamily:IPR008994"
+ /note="catalyzes branch migration in Holliday junction
+ intermediates"
+ /codon_start=1
+ /transl_table=11
+ /product="ATP-dependent DNA helicase RecG"
+ /protein_id="YP_001572831.1"
+ /db_xref="GI:161505719"
+ /db_xref="InterPro:IPR001650"
+ /db_xref="InterPro:IPR004365"
+ /db_xref="InterPro:IPR004609"
+ /db_xref="InterPro:IPR008994"
+ /db_xref="InterPro:IPR011545"
+ /db_xref="InterPro:IPR014001"
+ /translation="MSGRLLDAVPLNSLTGVGAAQSSKLAKIGLHTVQDLLLHLPLRY
+ EDRTHLYPIGELLPGIYATVEGEVLNCNITFGGRRMMTCQISDGSGILTMRFFNFNAA
+ MKNSLATGRRVLAYGEAKRGKYGAEMIHPEYRLQGDLSTPALQETLTPVYPTTEGVKQ
+ ATLRKLTDQALELLDTCAIAELLPPELAQGMMSLPEALRTLHRPPPTLQLADLETGQH
+ PAQRRLILEELLAHNLSMLALRAGAQRYHAQPLSTNDTLKHQLLASLPFNPTGAQARV
+ VAEIERDMALDVPMMRLVQGDVGSGKTLVAALAALRAIVHGKQVALMAPTELLAEQHA
+ NNFRNWFAPLGIEVGWLAGKQKGKARVTQQEAIASGQVQMVVGTHAIFQEQVQFNGLA
+ LVIIDEQHRFGVHQRLALWEKGQQQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDE
+ LPPGRTPVTTVAIPDTRRPEIINRVRNACTTEDRQAYWVCTLIEESDLLEAQAAEATW
+ EELKLALPELNIGLVHGRMKPAEKQAVMQRFKQGEMHLLVATTVIEVGVDVPNASLMI
+ IENPERLGLAQLHQLRGRVGRGAVASHCVLLYKSPLSKTAQKRLQVLRDSNDGFVIAQ
+ KDLEIRGPGELLGTRQTGNAEFKVADLLRDQAIIPEVQRIARHIHERYPQQAAALIER
+ WMPETERYSNA"
+ misc_feature complement(3829965..3832043)
+ /locus_tag="SARI_03895"
+ /note="ATP-dependent DNA helicase RecG; Provisional;
+ Region: PRK10917"
+ /db_xref="CDD:236794"
+ misc_feature complement(3831639..3831857)
+ /locus_tag="SARI_03895"
+ /note="RecG_wedge_OBF: A subfamily of OB folds
+ corresponding to the OB fold found in the N-terminal
+ (wedge) domain of Escherichia coli RecG. RecG is a
+ branched-DNA-specific helicase, which catalyzes the
+ interconversion of a DNA replication fork to a...; Region:
+ RecG_wedge_OBF; cd04488"
+ /db_xref="CDD:239934"
+ misc_feature complement(order(3831639..3831641,3831696..3831698,
+ 3831702..3831704,3831708..3831710,3831855..3831857))
+ /locus_tag="SARI_03895"
+ /note="generic binding surface II; other site"
+ /db_xref="CDD:239934"
+ misc_feature complement(order(3831660..3831662,3831738..3831740,
+ 3831753..3831755,3831804..3831806))
+ /locus_tag="SARI_03895"
+ /note="ssDNA binding site; other site"
+ /db_xref="CDD:239934"
+ misc_feature complement(3830754..3831170)
+ /locus_tag="SARI_03895"
+ /note="DEAD-like helicases superfamily. A diverse family
+ of proteins involved in ATP-dependent RNA or DNA
+ unwinding. This domain contains the ATP-binding region;
+ Region: DEXDc; cd00046"
+ /db_xref="CDD:238005"
+ misc_feature complement(3831135..3831149)
+ /locus_tag="SARI_03895"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238005"
+ misc_feature complement(3830844..3830855)
+ /locus_tag="SARI_03895"
+ /note="putative Mg++ binding site [ion binding]; other
+ site"
+ /db_xref="CDD:238005"
+ misc_feature complement(3830253..3830675)
+ /locus_tag="SARI_03895"
+ /note="Helicase superfamily c-terminal domain; associated
+ with DEXDc-, DEAD-, and DEAH-box proteins, yeast
+ initiation factor 4A, Ski2p, and Hepatitis C virus NS3
+ helicases; this domain is found in a wide variety of
+ helicases and helicase related proteins; may...; Region:
+ HELICc; cd00079"
+ /db_xref="CDD:238034"
+ misc_feature complement(order(3830388..3830396,3830469..3830474,
+ 3830562..3830573))
+ /locus_tag="SARI_03895"
+ /note="nucleotide binding region [chemical binding]; other
+ site"
+ /db_xref="CDD:238034"
+ misc_feature complement(order(3830283..3830285,3830292..3830294,
+ 3830304..3830306,3830370..3830372))
+ /locus_tag="SARI_03895"
+ /note="ATP-binding site [chemical binding]; other site"
+ /db_xref="CDD:238034"
+ gene complement(3832049..3832705)
+ /locus_tag="SARI_03896"
+ CDS complement(3832049..3832705)
+ /locus_tag="SARI_03896"
+ /inference="protein motif:BlastProDom:IPR001537"
+ /inference="protein motif:HMMPfam:IPR001537"
+ /inference="similar to AA sequence:REFSEQ:YP_218654.1"
+ /note="specifically modifies tRNA at position G18"
+ /codon_start=1
+ /transl_table=11
+ /product="tRNA guanosine-2'-O-methyltransferase"
+ /protein_id="YP_001572832.1"
+ /db_xref="GI:161505720"
+ /db_xref="InterPro:IPR001537"
+ /translation="MLARRQPDLTICMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS
+ RMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGRGMQILATHLSDKAVDFREIDYTRP
+ TCILMGQEKTGITQEALDLADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMY
+ LRENSMLPEDEQQRLLFEGGYPVLAKVAKRKGLPYPRINQQGEIDADADWWATMQAAG
+ "
+ misc_feature complement(3832055..3832705)
+ /locus_tag="SARI_03896"
+ /note="tRNA guanosine-2'-O-methyltransferase;
+ Provisional; Region: PRK11081"
+ /db_xref="CDD:236837"
+ misc_feature complement(3832262..3832684)
+ /locus_tag="SARI_03896"
+ /note="SpoU rRNA Methylase family; Region: SpoU_methylase;
+ pfam00588"
+ /db_xref="CDD:216010"
+ misc_feature complement(3832076..3832252)
+ /locus_tag="SARI_03896"
+ /note="SpoU, rRNA methylase, C-terminal; Region:
+ SpoU_methylas_C; pfam12105"
+ /db_xref="CDD:152540"
+ gene complement(3832981..3835092)
+ /locus_tag="SARI_03897"
+ CDS complement(3832981..3835092)
+ /locus_tag="SARI_03897"
+ /inference="protein motif:Gene3D:IPR012675"
+ /inference="protein motif:HMMPfam:IPR004095"
+ /inference="protein motif:HMMPfam:IPR006674"
+ /inference="protein motif:HMMPfam:IPR007685"
+ /inference="protein motif:HMMSmart:IPR003607"
+ /inference="protein motif:HMMTigr:IPR004811"
+ /inference="protein motif:superfamily:IPR008921"
+ /inference="protein motif:superfamily:IPR009078"
+ /inference="protein motif:superfamily:IPR012676"
+ /note="'KEGG: spt:SPA3594 0. spoT;
+ Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase;
+ CG Site No. 156 K01139;
+ COG: COG0317 Guanosine polyphosphate
+ pyrophosphohydrolases/synthetases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="bifunctional (p)ppGpp synthetase II/
+ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase"
+ /protein_id="YP_001572833.1"
+ /db_xref="GI:161505721"
+ /db_xref="InterPro:IPR003607"
+ /db_xref="InterPro:IPR004095"
+ /db_xref="InterPro:IPR004811"
+ /db_xref="InterPro:IPR006674"
+ /db_xref="InterPro:IPR007685"
+ /db_xref="InterPro:IPR008921"
+ /db_xref="InterPro:IPR009078"
+ /db_xref="InterPro:IPR012675"
+ /db_xref="InterPro:IPR012676"
+ /translation="MYLFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEP
+ YITHPVAVACILAEMKLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGVSK
+ LDKLKFRDKKEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIAR
+ ETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVIKEVVKAARGNRKEMIQKILS
+ EIEGRLQEAGIPCRVSGREKHLYSIYCKMVLKEQRFHSIMDIYAFRVIVHDSDTCYRV
+ LGQMHSLYKPRPGRVKDYIAIPKANGYQSLHTSMIGPHGVPVEVQIRTEDMDQMAEMG
+ VAAHWAYKEHGETSTTAQIRAQRWMQSLLELQQSAGSSFEFIESVKSDLFPDEIYVFT
+ PEGRIVELPAGATPVDFAYAVHTDIGHACVGARVDRQPYPLSQPLSSGQTVEIITAPG
+ ARPNAAWLNFVVSSKARAKIRQLLKNLKRDDSVSLGRRLLNHALGGSRKLAEIPQENI
+ QRELDRMKLATLDDLLAEIGLGNAMSVVVAKNLQQGEAVVPTVAQSNHGHLPIKGADG
+ VLITFAKCCRPIPGDPIIAHVSPGKGLVIHHESCRNIRGYQKEPEKFMAVEWDKETEQ
+ EFITEIKVEMFNHQGALANLTAAINTTTSNIQSLNTEEKDGRVYSTFIRLTARDRVHL
+ ANIMRKIRVMPDVIKVTRNRN"
+ misc_feature complement(3832984..3835092)
+ /locus_tag="SARI_03897"
+ /note="bifunctional (p)ppGpp synthetase II/
+ guanosine-3',5'-bis pyrophosphate
+ 3'-pyrophosphohydrolase; Provisional; Region:
+ PRK11092"
+ /db_xref="CDD:236843"
+ misc_feature complement(3834595..3834966)
+ /locus_tag="SARI_03897"
+ /note="Metal dependent phosphohydrolases with conserved
+ 'HD' motif; Region: HDc; cd00077"
+ /db_xref="CDD:238032"
+ misc_feature complement(order(3834676..3834678,3834874..3834879,
+ 3834949..3834951))
+ /locus_tag="SARI_03897"
+ /note="Zn2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238032"
+ misc_feature complement(3834874..3834876)
+ /locus_tag="SARI_03897"
+ /note="Mg2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238032"
+ misc_feature complement(3834094..3834453)
+ /locus_tag="SARI_03897"
+ /note="Nucleotidyltransferase (NT) domain of RelA- and
+ SpoT-like ppGpp synthetases and hydrolases; Region:
+ NT_Rel-Spo_like; cd05399"
+ /db_xref="CDD:143389"
+ misc_feature complement(order(3834097..3834102,3834124..3834126,
+ 3834130..3834132,3834136..3834138,3834172..3834174,
+ 3834184..3834186,3834190..3834192,3834196..3834198,
+ 3834211..3834213,3834217..3834219,3834301..3834303,
+ 3834313..3834318,3834379..3834381,3834385..3834387))
+ /locus_tag="SARI_03897"
+ /note="synthetase active site [active]"
+ /db_xref="CDD:143389"
+ misc_feature complement(order(3834100..3834102,3834130..3834132,
+ 3834136..3834138,3834172..3834174,3834184..3834186,
+ 3834190..3834192,3834196..3834198,3834211..3834213,
+ 3834217..3834219,3834385..3834387))
+ /locus_tag="SARI_03897"
+ /note="NTP binding site [chemical binding]; other site"
+ /db_xref="CDD:143389"
+ misc_feature complement(order(3834136..3834138,3834316..3834318))
+ /locus_tag="SARI_03897"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:143389"
+ misc_feature complement(3833752..3833931)
+ /locus_tag="SARI_03897"
+ /note="TGS_RelA_SpoT: The RelA (SpoT) protein, also
+ referred to as ppGpp hydrolase/synthetase, is a
+ ribosome-associated protein that is activated during amino
+ acid starvation and thought to mediate the stringent
+ response. RelA contains a TGS domain, named after...;
+ Region: TGS_RelA_SpoT; cd01668"
+ /db_xref="CDD:133438"
+ misc_feature complement(3832993..3833205)
+ /locus_tag="SARI_03897"
+ /note="ACT domain found C-terminal of the RelA/SpoT
+ domains; Region: ACT_RelA-SpoT; cd04876"
+ /db_xref="CDD:153148"
+ gene complement(3835111..3835386)
+ /gene="rpoZ"
+ /locus_tag="SARI_03898"
+ CDS complement(3835111..3835386)
+ /gene="rpoZ"
+ /locus_tag="SARI_03898"
+ /inference="protein motif:Gene3D:IPR012293"
+ /inference="protein motif:HMMPfam:IPR006110"
+ /inference="protein motif:HMMTigr:IPR003716"
+ /inference="protein motif:superfamily:IPR003716"
+ /inference="similar to AA sequence:INSD:EAY47606.1"
+ /note="promotes RNA polymerase assembly or stability;
+ latches the N- and C-terminal regions of the beta' subunit
+ thereby facilitating its interaction with the beta and
+ alpha subunits"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-directed RNA polymerase subunit omega"
+ /protein_id="YP_001572834.1"
+ /db_xref="GI:161505722"
+ /db_xref="InterPro:IPR003716"
+ /db_xref="InterPro:IPR006110"
+ /db_xref="InterPro:IPR012293"
+ /translation="MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEEND
+ KTTVIALREIEEGLINNQILDVRERQEQQEQEAAELQAVTAIAEGRR"
+ misc_feature complement(3835207..3835386)
+ /gene="rpoZ"
+ /locus_tag="SARI_03898"
+ /note="DNA-directed RNA polymerase, omega subunit; Region:
+ rpoZ; TIGR00690"
+ /db_xref="CDD:188073"
+ gene complement(3835441..3836064)
+ /gene="gmk"
+ /locus_tag="SARI_03899"
+ CDS complement(3835441..3836064)
+ /gene="gmk"
+ /locus_tag="SARI_03899"
+ /inference="protein motif:HMMPfam:IPR008144"
+ /inference="protein motif:HMMSmart:IPR008145"
+ /inference="protein motif:ScanRegExp:IPR008144"
+ /inference="similar to AA sequence:INSD:"
+ /note="'Essential for recycling GMP and indirectly, cGMP'"
+ /codon_start=1
+ /transl_table=11
+ /product="guanylate kinase"
+ /protein_id="YP_001572835.1"
+ /db_xref="GI:161505723"
+ /db_xref="InterPro:IPR008144"
+ /db_xref="InterPro:IPR008145"
+ /translation="MAQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRAP
+ RPGEVHGEHYFFVNHDEFKTMIGREAFLEHAEVFGNYYGTSRETIEQVLATGVDVFLD
+ IDWQGAQQIREKMPQARSIFILPPSKIELDRRLRGRGQDSEEVIAKRMAQAVAEMSHY
+ AEYDYLIVNDDFDTALSDLKTIIRAERLRMSRQKQRHDALISKLLAD"
+ misc_feature complement(3835495..3836064)
+ /gene="gmk"
+ /locus_tag="SARI_03899"
+ /note="Guanylate kinase [Nucleotide transport and
+ metabolism]; Region: Gmk; COG0194"
+ /db_xref="CDD:223272"
+ misc_feature complement(3835525..3836049)
+ /gene="gmk"
+ /locus_tag="SARI_03899"
+ /note="Guanosine monophosphate kinase (GMPK, EC 2.7.4.8),
+ also known as guanylate kinase (GKase), catalyzes the
+ reversible phosphoryl transfer from adenosine triphosphate
+ (ATP) to guanosine monophosphate (GMP) to yield adenosine
+ diphosphate (ADP) and guanosine...; Region: GMPK; cd00071"
+ /db_xref="CDD:238026"
+ misc_feature complement(order(3835819..3835821,3835834..3835836,
+ 3835903..3835905,3835930..3835932,3835939..3835941,
+ 3835960..3835962,3836014..3836016,3836032..3836034))
+ /gene="gmk"
+ /locus_tag="SARI_03899"
+ /note="catalytic site [active]"
+ /db_xref="CDD:238026"
+ misc_feature complement(order(3836014..3836016,3836032..3836034))
+ /gene="gmk"
+ /locus_tag="SARI_03899"
+ /note="G-X2-G-X-G-K; other site"
+ /db_xref="CDD:238026"
+ gene complement(3836129..3836302)
+ /locus_tag="SARI_03900"
+ CDS complement(3836129..3836302)
+ /locus_tag="SARI_03900"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572836.1"
+ /db_xref="GI:161505724"
+ /translation="MPGRYSASENKNREVKMHHPSRFPDFLAGCCNDAIKAEKGTQNA
+ IIWRKKCDKDYVA"
+ gene 3836321..3838006
+ /gene="ligB"
+ /locus_tag="SARI_03901"
+ CDS 3836321..3838006
+ /gene="ligB"
+ /locus_tag="SARI_03901"
+ /inference="protein motif:BlastProDom:IPR004150"
+ /inference="protein motif:Gene3D:IPR004150"
+ /inference="protein motif:HMMPfam:IPR004150"
+ /inference="protein motif:HMMPfam:IPR013839"
+ /inference="protein motif:HMMSmart:IPR013840"
+ /inference="protein motif:ScanRegExp:IPR001679"
+ /inference="protein motif:superfamily:IPR008994"
+ /inference="protein motif:superfamily:IPR010994"
+ /inference="similar to AA sequence:REFSEQ:NP_462639.1"
+ /note="this ligase is similar to LigA but it lacks the
+ C-terminal BRCT domain; catalyzes strand joining of nicked
+ DNA in the presence of a divalent cation and NAD+"
+ /codon_start=1
+ /transl_table=11
+ /product="NAD-dependent DNA ligase LigB"
+ /protein_id="YP_001572837.1"
+ /db_xref="GI:161505725"
+ /db_xref="InterPro:IPR001679"
+ /db_xref="InterPro:IPR004150"
+ /db_xref="InterPro:IPR008994"
+ /db_xref="InterPro:IPR010994"
+ /db_xref="InterPro:IPR013839"
+ /db_xref="InterPro:IPR013840"
+ /translation="MGVWKSMVWGVLLWHSQSGAICPVWPSARTIEEIARLQQQLADW
+ NDIYWKQGVSAVDDSVYDQLSAKLVQWQRCVGQDVSSTPVSPPLNGTTTHPVAHTGVR
+ KLADRQAVAQWMRGHSEFWVQPKVDGVAVTLVYQNGKLTRAISRGNGLQGEDWTQKIR
+ QISSIPQTTRGALANAVLQGEIFLQLKGHIQQRMGGMNARSKVAGMLMRQKNTSALNS
+ LGIFIWAWPDGPANMTERLSQLAKAGFSLTQKYSQMVKNASEVERARRSWLTSALPFV
+ TDGVVIRMAKEPSSQYWRPGQGDWLAAWKYPPVAQVAQVSAIQFSVGKSGKISVIASL
+ VPVMLDDKRVKRVNIGSVKRWEAWDIAPGDQILVSLAGQGIPRLDEVVWRSRERSKPV
+ PPGNHFNSLTCFYASATCQEQFISRLVWLGSRAALGLDGMGEASWRALHQTHRFEHIF
+ SWLALTPAEIANTPGFAKGKSELIWRQFNLARRQPFSRWVMAMDIPLTQAALQASGDR
+ SWEQLLMRTDQHWRQLPATGERRAGRVSDWRDNPRIKALSRWLAAQHIPGFGT"
+ misc_feature 3836321..3838003
+ /gene="ligB"
+ /locus_tag="SARI_03901"
+ /note="NAD-dependent DNA ligase LigB; Reviewed; Region:
+ ligB; PRK08097"
+ /db_xref="CDD:236150"
+ misc_feature 3836402..3837244
+ /gene="ligB"
+ /locus_tag="SARI_03901"
+ /note="NAD+ dependent DNA ligase adenylation domain. DNA
+ ligases catalyze the crucial step of joining the breaks in
+ duplex DNA during DNA replication, repair and
+ recombination, utilizing either ATP or NAD(+) as a
+ cofactor, but using the same basic reaction...; Region:
+ LIGANc; cl03295"
+ /db_xref="CDD:243376"
+ misc_feature order(3836621..3836623,3836687..3836689,3836693..3836695,
+ 3836756..3836758,3836861..3836863,3836990..3836992,
+ 3837161..3837163,3837167..3837169)
+ /gene="ligB"
+ /locus_tag="SARI_03901"
+ /note="nucleotide binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:238062"
+ misc_feature order(3836693..3836695,3836699..3836704)
+ /gene="ligB"
+ /locus_tag="SARI_03901"
+ /note="K-X-D-G motif; other site"
+ /db_xref="CDD:238062"
+ misc_feature 3836693..3836695
+ /gene="ligB"
+ /locus_tag="SARI_03901"
+ /note="catalytic site [active]"
+ /db_xref="CDD:238062"
+ misc_feature 3837251..3837502
+ /gene="ligB"
+ /locus_tag="SARI_03901"
+ /note="NAD-dependent DNA ligase OB-fold domain; Region:
+ DNA_ligase_OB; pfam03120"
+ /db_xref="CDD:145978"
+ gene complement(3838003..3838620)
+ /locus_tag="SARI_03902"
+ CDS complement(3838003..3838620)
+ /locus_tag="SARI_03902"
+ /inference="protein motif:HMMPfam:IPR005115"
+ /inference="similar to AA sequence:INSD:AAL22597.1"
+ /note="'COG: COG2860 Predicted membrane protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572838.1"
+ /db_xref="GI:161505726"
+ /db_xref="InterPro:IPR005115"
+ /translation="MLLHVLYLIGITAEAMTGALAAGRRRMDTFGVIIIATATAIGGG
+ SVRDILLGHYPLGWVKHPEYVIIVATAAVLTTIVAPVMPYLRKLFLVLDALGLVVFSI
+ IGAQIALDMGEGPIIAVVAAVTTGVFGGVLRDMFCKRIPLVFQKELYAGISFASAVLY
+ IALQHYVMNPDVVVMSTLLFGFTARLLALRLKLGLPVFYYRHEGH"
+ misc_feature complement(3838006..3838620)
+ /locus_tag="SARI_03902"
+ /note="Predicted membrane protein [Function unknown];
+ Region: COG2860"
+ /db_xref="CDD:225415"
+ misc_feature complement(<3838429..3838614)
+ /locus_tag="SARI_03902"
+ /note="UPF0126 domain; Region: UPF0126; pfam03458"
+ /db_xref="CDD:217571"
+ misc_feature complement(3838120..3838356)
+ /locus_tag="SARI_03902"
+ /note="UPF0126 domain; Region: UPF0126; pfam03458"
+ /db_xref="CDD:217571"
+ gene 3838740..3838910
+ /locus_tag="SARI_03903"
+ CDS 3838740..3838910
+ /locus_tag="SARI_03903"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572839.1"
+ /db_xref="GI:161505727"
+ /translation="MIFYDKYQYIVFHFCSFIYKIFSIFELDKLCERRPGRAAGSSLH
+ YGCCAVSCVMKR"
+ gene complement(3838871..3839752)
+ /locus_tag="SARI_03904"
+ CDS complement(3838871..3839752)
+ /locus_tag="SARI_03904"
+ /inference="protein motif:HMMPfam:IPR001279"
+ /inference="similar to AA sequence:REFSEQ:YP_152702.1"
+ /note="'KEGG: sus:Acid_6874 1.7e-42 beta-lactamase
+ K01467;
+ COG: COG0491 Zn-dependent hydrolases, including
+ glyoxylases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572840.2"
+ /db_xref="GI:448236287"
+ /db_xref="InterPro:IPR001279"
+ /translation="MNRYALFFVCIFSTSALPAMAALDRSQPLSPAPPLSLFKAWAKP
+ IEPFQITEGVWYVGTENLSSILLTTPAGHILIDAGLDESAPQIKANIETAGFRLTDVR
+ YLLNSHARLDQAGGMARLKAWSGAQLVASQPNAEQMARGGRQDFALGDALPFPPVTTD
+ KIIHDRESISLGGITVTALFTPGHLPGATSWRVTLRNGKTLIYADSLATPDYLLINNK
+ NYPDLVTDIQHSFKTLDAQYVDIFIANKGDRFGLLEKRQQLRNGDTQAFFDPNGLQQY
+ VERSRQRFITQLTAQQP"
+ misc_feature complement(3839021..3839566)
+ /locus_tag="SARI_03904"
+ /note="Metallo-beta-lactamase superfamily; Region:
+ Lactamase_B; smart00849"
+ /db_xref="CDD:214854"
+ gene 3839826..3840728
+ /locus_tag="SARI_03905"
+ CDS 3839826..3840728
+ /locus_tag="SARI_03905"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="similar to AA sequence:REFSEQ:NP_462636.1"
+ /note="'COG: NOG25608 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572841.1"
+ /db_xref="GI:161505729"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR011991"
+ /translation="MNLLQMDMNLLKVLYVLLETGSTGKTAQKLALSPSAVSHALMRL
+ RDALHDPLFRREGNRQIPTPYAQALRDKLTPVFVSLNEELFGDKENGSRCFRVVIPPA
+ LNALLTPVLAEKGHLHQAVIECLPFARRPWRDELLDSSVDLVLAIGDHQKQVSALHYE
+ RVGTTRLIAVYGMPLRSRLENAAALNFDELQHYQYIYCLPWSKENNELDRQQTRAGFE
+ RPLAFVCHDYSQLAPAVQSAPLMAIVPRPWYENLSDKRGLFVLPLAGEQAEGAIFMQY
+ RASTVEWKRRLIEAIRRKLKTYYQ"
+ misc_feature 3839841..3840713
+ /locus_tag="SARI_03905"
+ /note="Transcriptional regulator [Transcription]; Region:
+ LysR; COG0583"
+ /db_xref="CDD:223656"
+ misc_feature 3839847..3840026
+ /locus_tag="SARI_03905"
+ /note="Bacterial regulatory helix-turn-helix protein, lysR
+ family; Region: HTH_1; pfam00126"
+ /db_xref="CDD:215735"
+ misc_feature order(3840150..3840155,3840159..3840164,3840177..3840179,
+ 3840183..3840203,3840489..3840506,3840522..3840527,
+ 3840531..3840536)
+ /locus_tag="SARI_03905"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:176102"
+ misc_feature <3840261..3840713
+ /locus_tag="SARI_03905"
+ /note="LysR substrate binding domain; Region:
+ LysR_substrate; pfam03466"
+ /db_xref="CDD:217576"
+ gene complement(3840778..3841641)
+ /locus_tag="SARI_03906"
+ CDS complement(3840778..3841641)
+ /locus_tag="SARI_03906"
+ /inference="protein motif:HMMPfam:IPR013527"
+ /inference="protein motif:HMMPfam:IPR013551"
+ /inference="protein motif:HMMTigr:IPR005229"
+ /inference="similar to AA sequence:REFSEQ:NP_807405.1"
+ /note="'COG: COG1561 Uncharacterized stress-induced
+ protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572842.1"
+ /db_xref="GI:161505730"
+ /db_xref="InterPro:IPR005229"
+ /db_xref="InterPro:IPR013527"
+ /db_xref="InterPro:IPR013551"
+ /translation="MIRSMTAYARREIKGEWGSATWEMRSVNQRYLETYFRLPEQFRS
+ LEPVVRERIRTRLTRGKVECMLRFEPDASAQGELILNEKLAKQLVSAANWVKMQSDEG
+ EINPVDILRWPGVMAAQEQDLDAIAAEILATLDGTLDDFIVARETEGQALKALIEQRL
+ EGVSAEVAKVRAHMPEILQWQRERLVAKLEDAQVQLENNRLEQELVMMAQRIDVAEEL
+ DRLEAHVKETYNILKKKEAVGRRLDFMMQEFNRESNTLASKSINADVTNSAIELKVLI
+ EQMREQIQNIE"
+ misc_feature complement(3840781..3841641)
+ /locus_tag="SARI_03906"
+ /note="hypothetical protein; Provisional; Region:
+ PRK11820"
+ /db_xref="CDD:236993"
+ misc_feature complement(3841180..3841638)
+ /locus_tag="SARI_03906"
+ /note="YicC-like family, N-terminal region; Region:
+ YicC_N; pfam03755"
+ /db_xref="CDD:217714"
+ misc_feature complement(3840781..3841038)
+ /locus_tag="SARI_03906"
+ /note="Domain of unknown function (DUF1732); Region:
+ DUF1732; pfam08340"
+ /db_xref="CDD:149411"
+ gene 3841767..3842483
+ /gene="rph"
+ /locus_tag="SARI_03907"
+ CDS 3841767..3842483
+ /gene="rph"
+ /locus_tag="SARI_03907"
+ /inference="protein motif:HMMPfam:IPR001247"
+ /inference="protein motif:HMMTigr:IPR002381"
+ /inference="protein motif:ScanRegExp:IPR002381"
+ /inference="protein motif:superfamily:IPR001247"
+ /inference="similar to AA sequence:INSD:"
+ /note="RNase PH; tRNA nucleotidyltransferase; forms
+ hexamers in Bacillus subtilis; phosphoroltic 3'-5'
+ exoribonuclease; involved in maturation of tRNA precursors
+ and removes terminal nucleotides near CCA acceptor arms of
+ mature tRNAs"
+ /codon_start=1
+ /transl_table=11
+ /product="ribonuclease PH"
+ /protein_id="YP_001572843.1"
+ /db_xref="GI:161505731"
+ /db_xref="InterPro:IPR001247"
+ /db_xref="InterPro:IPR002381"
+ /translation="MRPAGRSANQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIE
+ EGVPRFLKGQGQGWITAEYGMLPRATHTRNAREAAKGKQGGRTMEIQRLIARALRAAV
+ DLKTLGEFTITLDCDVIQADGGTRTASITGACVALADALNKLVANGKLKTNPMKGMVA
+ AVSVGIVNGEAICDLEYVEDSAAETDMNVVMTEDGRIIEVQGTAEGEPFSHEELLTLL
+ ALARGGIESIVATQKAALEN"
+ misc_feature 3841767..3842477
+ /gene="rph"
+ /locus_tag="SARI_03907"
+ /note="ribonuclease PH; Reviewed; Region: rph; PRK00173"
+ /db_xref="CDD:178914"
+ misc_feature 3841794..3842474
+ /gene="rph"
+ /locus_tag="SARI_03907"
+ /note="Ribonuclease PH; Region: RNase_PH_bact; cd11362"
+ /db_xref="CDD:206767"
+ misc_feature order(3841824..3841838,3841866..3841868,3841872..3841874,
+ 3841878..3841880,3841884..3841886,3841890..3841892,
+ 3841950..3841952,3841956..3841958,3841962..3841979,
+ 3841983..3841985,3841992..3841997,3842019..3842024,
+ 3842028..3842033,3842040..3842042,3842052..3842054,
+ 3842061..3842063,3842103..3842105,3842109..3842111,
+ 3842115..3842117,3842121..3842129,3842352..3842366,
+ 3842370..3842372,3842376..3842393,3842397..3842399,
+ 3842406..3842411,3842418..3842423,3842430..3842432)
+ /gene="rph"
+ /locus_tag="SARI_03907"
+ /note="hexamer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:206767"
+ misc_feature order(3841959..3841961,3842022..3842024,3842127..3842144,
+ 3842304..3842306,3842322..3842324)
+ /gene="rph"
+ /locus_tag="SARI_03907"
+ /note="active site"
+ /db_xref="CDD:206767"
+ gene 3842562..3843203
+ /gene="pyrE"
+ /locus_tag="SARI_03908"
+ CDS 3842562..3843203
+ /gene="pyrE"
+ /locus_tag="SARI_03908"
+ /inference="protein motif:HMMPfam:IPR000836"
+ /inference="protein motif:HMMTigr:IPR004467"
+ /inference="protein motif:ScanRegExp:IPR002375"
+ /inference="similar to AA sequence:INSD:CAA79607.1"
+ /note="involved in fifth step of pyrimidine biosynthesis;
+ converts orotidine 5'-phosphate and diphosphate to orotate
+ and 5-phospho-alpha-D-ribose 1-diphosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="orotate phosphoribosyltransferase"
+ /protein_id="YP_001572844.1"
+ /db_xref="GI:161505732"
+ /db_xref="InterPro:IPR000836"
+ /db_xref="InterPro:IPR002375"
+ /db_xref="InterPro:IPR004467"
+ /translation="MKPYQRQFIEFALDKQVLKFGEFTLKSGRKSPYFFNAGLFNTGR
+ DLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTTAVALAEHHDKDLPYCFNRKEA
+ KDHGEGGNLVGSALRGRVMLVDDVITAGTAIRESMEIIQAHGATLAGVLISLDRQERG
+ RSEISAIHEVERDYGCNVISIITLKDLITYLEEKPEMAEHLAAVRAYWEEFGV"
+ misc_feature 3842706..3843083
+ /gene="pyrE"
+ /locus_tag="SARI_03908"
+ /note="Phosphoribosyl transferase (PRT)-type I domain;
+ Region: PRTases_typeI; cd06223"
+ /db_xref="CDD:206754"
+ misc_feature order(3842772..3842774,3842778..3842780,3842931..3842939,
+ 3842943..3842957,3843027..3843029)
+ /gene="pyrE"
+ /locus_tag="SARI_03908"
+ /note="active site"
+ /db_xref="CDD:206754"
+ gene complement(3843287..3843883)
+ /gene="slmA"
+ /locus_tag="SARI_03909"
+ CDS complement(3843287..3843883)
+ /gene="slmA"
+ /locus_tag="SARI_03909"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR001647"
+ /inference="protein motif:ScanRegExp:IPR001647"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:REFSEQ:YP_152697.1"
+ /note="FtsZ binding protein; synthetically lethal with a
+ defect in the Min system; this protein is the first
+ identified nucleoid occlusion factor which works along
+ with the Min system to properly position the FtsZ ring
+ assembly"
+ /codon_start=1
+ /transl_table=11
+ /product="nucleoid occlusion protein"
+ /protein_id="YP_001572845.1"
+ /db_xref="GI:161505733"
+ /db_xref="InterPro:IPR001647"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /translation="MAEKQTAKRNRREEILQSLALMLESSDGSQRITTAKLAASVGVS
+ EAALYRHFPSKTRMFDSLIEFIEDSLITRINLILKDEKDTSARLRLIVLLILGFGERN
+ PGLTRILTGHALMFEQDRLQGRINQLFERIEAQLRQVLREKRMREGEGYATDENLLAS
+ QLLAFCEGMLSRFVRSEFKYRPTDDFDARWPLIAAQLQ"
+ misc_feature complement(3843299..3843883)
+ /gene="slmA"
+ /locus_tag="SARI_03909"
+ /note="division inhibitor protein; Provisional; Region:
+ slmA; PRK09480"
+ /db_xref="CDD:181894"
+ misc_feature complement(3843698..3843826)
+ /gene="slmA"
+ /locus_tag="SARI_03909"
+ /note="Bacterial regulatory proteins, tetR family; Region:
+ TetR_N; pfam00440"
+ /db_xref="CDD:201228"
+ unsure 3843831..3844132
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(3843991..3844449)
+ /gene="dut"
+ /locus_tag="SARI_03910"
+ CDS complement(3843991..3844449)
+ /gene="dut"
+ /locus_tag="SARI_03910"
+ /inference="protein motif:HMMPfam:IPR008180"
+ /inference="protein motif:HMMTigr:IPR008181"
+ /inference="similar to AA sequence:INSD:AAX67560.1"
+ /note="catalyzes the formation of dUMP from dUTP"
+ /codon_start=1
+ /transl_table=11
+ /product="deoxyuridine 5'-triphosphate
+ nucleotidohydrolase"
+ /protein_id="YP_001572846.1"
+ /db_xref="GI:161505734"
+ /db_xref="InterPro:IPR008180"
+ /db_xref="InterPro:IPR008181"
+ /translation="MMKKIDVKILDPRVGQQFPLPTYATSGSAGLDLRACLDGAVELA
+ PGATTLVPTGLAIHIADPSLAAVMLPRSGLGHKHGIVLGNLVGLIDSDYQGQLMVSIW
+ NRGQDSFTIEPGERIAQMVFVPVVQAEFNLVEAFDATERGEGGFGHSGRK"
+ misc_feature complement(3844084..3844365)
+ /gene="dut"
+ /locus_tag="SARI_03910"
+ /note="Trimeric dUTP diphosphatases; Region:
+ trimeric_dUTPase; cd07557"
+ /db_xref="CDD:143638"
+ misc_feature complement(order(3844093..3844095,3844105..3844107,
+ 3844114..3844128,3844138..3844140,3844144..3844146,
+ 3844150..3844152,3844156..3844158,3844177..3844179,
+ 3844186..3844188,3844204..3844212,3844228..3844245,
+ 3844249..3844251,3844300..3844302,3844306..3844311,
+ 3844324..3844326,3844360..3844365))
+ /gene="dut"
+ /locus_tag="SARI_03910"
+ /note="trimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:143638"
+ misc_feature complement(order(3844156..3844161,3844171..3844173,
+ 3844180..3844188,3844231..3844239))
+ /gene="dut"
+ /locus_tag="SARI_03910"
+ /note="active site"
+ /db_xref="CDD:143638"
+ gene complement(3844427..3845647)
+ /locus_tag="SARI_03911"
+ CDS complement(3844427..3845647)
+ /locus_tag="SARI_03911"
+ /inference="protein motif:Gene3D:IPR003382"
+ /inference="protein motif:HMMPfam:IPR003382"
+ /inference="protein motif:HMMPfam:IPR007085"
+ /inference="protein motif:HMMTigr:IPR005252"
+ /inference="protein motif:superfamily:IPR003382"
+ /inference="similar to AA sequence:REFSEQ:NP_462630.1"
+ /note="'catalyzes the conjugation of cysteine to
+ 4'-phosphopantothenate to form
+ 4-phosphopantothenoylcysteine, which is then
+ decarboxylated to form 4'-phosphopantotheine'"
+ /codon_start=1
+ /transl_table=11
+ /product="bifunctional phosphopantothenoylcysteine
+ decarboxylase/phosphopantothenate synthase"
+ /protein_id="YP_001572847.2"
+ /db_xref="GI:228879513"
+ /db_xref="InterPro:IPR003382"
+ /db_xref="InterPro:IPR005252"
+ /db_xref="InterPro:IPR007085"
+ /translation="MSLVGKKIVLAVSGGIAAYKTPELVRRLRERGANVRVAMTEAAK
+ AFITPLSLQAVSGYPVSDSLLDPAAEAAMGHIELGKWADLVILAPATADLIARVASGM
+ ANDLVSTICLATPAPVAVLPAMNQQMYRAAATQHNLEVLTSRGLFIWGPDTGSQACGD
+ VGPGRMLDPVVIVDKVAAHFSAVNDLQHLNIMITAGPTREPLDPVRYISNHSSGKMGF
+ AIAAAAARRGANVTLVSGPVSLPTPPFVQRIDVMTALEMEAAVQSAVQQQHIFISCAA
+ VADYRAETIASKKIKKQAAQGDELIIKMVKNPDIIAGVAALSQHRPYVVGFAAETNNV
+ EEYARQKRIRKNLDLICANDVSLSNQGFNSDNNALHLFWQDGDKVLPLERKELLGQLL
+ LDEIVTRYDEKNRR"
+ misc_feature complement(3844511..3845647)
+ /locus_tag="SARI_03911"
+ /note="bifunctional phosphopantothenoylcysteine
+ decarboxylase/phosphopantothenate synthase; Validated;
+ Region: PRK05579"
+ /db_xref="CDD:235513"
+ misc_feature complement(3845246..3845632)
+ /locus_tag="SARI_03911"
+ /note="Flavoprotein; Region: Flavoprotein; pfam02441"
+ /db_xref="CDD:217035"
+ misc_feature complement(3844532..3845092)
+ /locus_tag="SARI_03911"
+ /note="DNA / pantothenate metabolism flavoprotein; Region:
+ DFP; pfam04127"
+ /db_xref="CDD:217913"
+ gene 3845823..3846488
+ /gene="radC"
+ /locus_tag="SARI_03912"
+ CDS 3845823..3846488
+ /gene="radC"
+ /locus_tag="SARI_03912"
+ /inference="protein motif:BlastProDom:IPR001405"
+ /inference="protein motif:HMMPfam:IPR001405"
+ /inference="protein motif:HMMTigr:IPR001405"
+ /inference="protein motif:ScanRegExp:IPR001405"
+ /inference="protein motif:superfamily:IPR010994"
+ /inference="similar to AA sequence:INSD:AAL22588.1"
+ /note="Involved in DNA double-strand break repair and
+ recombination. Promotes the annealing of complementary
+ single-stranded DNA and by simulation of RAD51
+ recombinase"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA repair protein RadC"
+ /protein_id="YP_001572848.1"
+ /db_xref="GI:161505736"
+ /db_xref="InterPro:IPR001405"
+ /db_xref="InterPro:IPR010994"
+ /translation="MDTLDELLPREKMLRSGIASLSDVELLALFLRTGTPGKDVITLA
+ KEMLQRFGSLYGLLSADFAQFRGINGIGLAKFAQLKGIAELARRYYSVRMNEEDALLS
+ PEMTLEFLQSQLTGEEREIFLVIFLDAQHRVLQHSRLFSGTLSHVEVHPREIVREAIK
+ LNASAVILAHNHPSGCAEPSKADKHITDRVIKCCQFMDIRVLDHLIIGRGEYVSFAER
+ GWI"
+ misc_feature 3845823..3846485
+ /gene="radC"
+ /locus_tag="SARI_03912"
+ /note="hypothetical protein; Reviewed; Region: PRK00024"
+ /db_xref="CDD:178801"
+ misc_feature 3846132..3846470
+ /gene="radC"
+ /locus_tag="SARI_03912"
+ /note="Mov34/MPN/PAD-1 family; Region: MPN_DUF2466;
+ cd08071"
+ /db_xref="CDD:163702"
+ misc_feature order(3846180..3846182,3846330..3846332,3846336..3846338,
+ 3846360..3846362,3846369..3846371)
+ /gene="radC"
+ /locus_tag="SARI_03912"
+ /note="MPN+ (JAMM) motif; other site"
+ /db_xref="CDD:163702"
+ misc_feature order(3846330..3846332,3846336..3846338,3846369..3846371)
+ /gene="radC"
+ /locus_tag="SARI_03912"
+ /note="Zinc-binding site [ion binding]; other site"
+ /db_xref="CDD:163702"
+ unsure 3846093..3846196
+ /gene="radC"
+ /locus_tag="SARI_03912"
+ /note="Sequence derived from one plasmid subclone"
+ unsure 3846392..3846404
+ /gene="radC"
+ /locus_tag="SARI_03912"
+ /note="Sequence derived from one plasmid subclone"
+ unsure 3846918..3847026
+ /note="Sequence derived from one plasmid subclone"
+ gene 3846962..3847129
+ /gene="rpmG"
+ /locus_tag="SARI_03913"
+ CDS 3846962..3847129
+ /gene="rpmG"
+ /locus_tag="SARI_03913"
+ /inference="protein motif:BlastProDom:IPR001705"
+ /inference="protein motif:HMMPfam:IPR001705"
+ /inference="protein motif:HMMTigr:IPR001705"
+ /inference="protein motif:ScanRegExp:IPR001705"
+ /inference="similar to AA sequence:INSD:EAY46629.1"
+ /note="'in Escherichia coli BM108, a mutation that results
+ in lack of L33 synthesis had no effect on ribosome
+ synthesis or function; there are paralogous genes in
+ several bacterial genomes, and a CXXC motif for zinc
+ binding and an upstream regulation region of the paralog
+ lacking this motif that are regulated by zinc similar to
+ other ribosomal proteins like L31; the proteins in this
+ group lack the CXXC motif'"
+ /codon_start=1
+ /transl_table=11
+ /product="50S ribosomal protein L33"
+ /protein_id="YP_001572849.1"
+ /db_xref="GI:161505737"
+ /db_xref="InterPro:IPR001705"
+ /translation="MAKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVR
+ QHVIYKEAKIK"
+ misc_feature 3846962..3847120
+ /gene="rpmG"
+ /locus_tag="SARI_03913"
+ /note="50S ribosomal protein L33; Validated; Region: rpmG;
+ PRK00595"
+ /db_xref="CDD:179075"
+ gene 3847227..3848036
+ /locus_tag="SARI_03914"
+ CDS 3847227..3848036
+ /locus_tag="SARI_03914"
+ /inference="protein motif:BlastProDom:IPR000191"
+ /inference="protein motif:HMMPfam:IPR000191"
+ /inference="protein motif:HMMPfam:IPR010663"
+ /inference="protein motif:HMMTigr:IPR000191"
+ /inference="protein motif:ScanRegExp:IPR000214"
+ /inference="protein motif:superfamily:IPR010979"
+ /inference="similar to AA sequence:INSD:AAO71274.1"
+ /note="Involved in base excision repair of DNA damaged by
+ oxidation or by mutagenic agents. Acts as DNA glycosylase
+ that recognizes and removes damaged bases"
+ /codon_start=1
+ /transl_table=11
+ /product="formamidopyrimidine-DNA glycosylase"
+ /protein_id="YP_001572850.1"
+ /db_xref="GI:161505738"
+ /db_xref="InterPro:IPR000191"
+ /db_xref="InterPro:IPR000214"
+ /db_xref="InterPro:IPR010663"
+ /db_xref="InterPro:IPR010979"
+ /translation="MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIYRL
+ SDTPVLSVQRRAKYLLLELPDGWIIIHLGMSGSLRILSEAQPAEKHDHVDLVMSNGKI
+ LRYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKRKTAIKPWLMD
+ NKLVVGVGNIYASESLFAAGIHPDRLASSLSKEECDLLARVIKAVLLRSIEQGGTTLK
+ DFLQSDGKPGYFAQELQVYGRKGEPCRVCGTPVVATKHAQRATFYCRHCQK"
+ misc_feature 3847227..3848033
+ /locus_tag="SARI_03914"
+ /note="formamidopyrimidine/5-formyluracil/
+ 5-hydroxymethyluracil DNA glycosylase; Validated; Region:
+ PRK01103"
+ /db_xref="CDD:234899"
+ misc_feature 3847230..3847574
+ /locus_tag="SARI_03914"
+ /note="N-terminal domain of Escherichia coli Fpg1/MutM and
+ related bacterial DNA glycosylases; Region: EcFpg-like_N;
+ cd08966"
+ /db_xref="CDD:176800"
+ misc_feature order(3847230..3847235,3847395..3847397,3847437..3847439,
+ 3847443..3847451,3847491..3847496,3847548..3847559)
+ /locus_tag="SARI_03914"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:176800"
+ misc_feature 3847230..3847232
+ /locus_tag="SARI_03914"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:176800"
+ misc_feature order(3847233..3847244,3847248..3847253,3847260..3847262,
+ 3847386..3847397,3847449..3847451)
+ /locus_tag="SARI_03914"
+ /note="H2TH interface [polypeptide binding]; other site"
+ /db_xref="CDD:176800"
+ misc_feature order(3847233..3847235,3847395..3847397)
+ /locus_tag="SARI_03914"
+ /note="putative catalytic residues [active]"
+ /db_xref="CDD:176800"
+ misc_feature 3847437..3847439
+ /locus_tag="SARI_03914"
+ /note="turnover-facilitating residue; other site"
+ /db_xref="CDD:176800"
+ misc_feature order(3847446..3847448,3847551..3847553,3847557..3847559)
+ /locus_tag="SARI_03914"
+ /note="intercalation triad [nucleotide binding]; other
+ site"
+ /db_xref="CDD:176800"
+ misc_feature 3847449..3847451
+ /locus_tag="SARI_03914"
+ /note="8OG recognition residue [nucleotide binding]; other
+ site"
+ /db_xref="CDD:176800"
+ misc_feature order(3847494..3847496,3847554..3847556)
+ /locus_tag="SARI_03914"
+ /note="putative reading head residues; other site"
+ /db_xref="CDD:176800"
+ misc_feature 3847611..3847886
+ /locus_tag="SARI_03914"
+ /note="Formamidopyrimidine-DNA glycosylase H2TH domain;
+ Region: H2TH; pfam06831"
+ /db_xref="CDD:115485"
+ misc_feature 3847947..3848033
+ /locus_tag="SARI_03914"
+ /note="Zinc finger found in FPG and IleRS; Region:
+ zf-FPG_IleRS; pfam06827"
+ /db_xref="CDD:203527"
+ unsure 3847265..3847275
+ /locus_tag="SARI_03914"
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(3848060..3848539)
+ /gene="coaD"
+ /locus_tag="SARI_03915"
+ CDS complement(3848060..3848539)
+ /gene="coaD"
+ /locus_tag="SARI_03915"
+ /inference="protein motif:HMMPanther:IPR001980"
+ /inference="protein motif:HMMPfam:IPR004820"
+ /inference="protein motif:HMMTigr:IPR001980"
+ /inference="protein motif:HMMTigr:IPR004821"
+ /inference="similar to AA sequence:INSD:CAD03268.1"
+ /note="Catalyzes the conversion of ATP and pantetheine
+ 4'-phosphate to diphosphate and 3'-dephospho-coA"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphopantetheine adenylyltransferase"
+ /protein_id="YP_001572851.1"
+ /db_xref="GI:161505739"
+ /db_xref="InterPro:IPR001980"
+ /db_xref="InterPro:IPR004820"
+ /db_xref="InterPro:IPR004821"
+ /translation="MQKRAIYPGTFDPITNGHLDIVTRATQMFDHVILAIAASPGKNP
+ MFTLDERVALAQKATAHLSNVEVAGFSDLMANFARDRQANILIRGLRAVADFEYEMQL
+ AHMNRHLMPQLESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPDNVHQALMNKLK"
+ misc_feature complement(3848063..3848533)
+ /gene="coaD"
+ /locus_tag="SARI_03915"
+ /note="phosphopantetheine adenylyltransferase;
+ Provisional; Region: coaD; PRK00168"
+ /db_xref="CDD:234674"
+ misc_feature complement(3848072..3848530)
+ /gene="coaD"
+ /locus_tag="SARI_03915"
+ /note="Phosphopantetheine adenylyltransferase; Region:
+ PPAT; cd02163"
+ /db_xref="CDD:173914"
+ misc_feature complement(order(3848159..3848161,3848168..3848170,
+ 3848180..3848182,3848222..3848224,3848234..3848236,
+ 3848243..3848248,3848267..3848269,3848273..3848278,
+ 3848318..3848326,3848414..3848416,3848429..3848431,
+ 3848477..3848479,3848486..3848491,3848507..3848521))
+ /gene="coaD"
+ /locus_tag="SARI_03915"
+ /note="active site"
+ /db_xref="CDD:173914"
+ misc_feature complement(3848486..3848497)
+ /gene="coaD"
+ /locus_tag="SARI_03915"
+ /note="(T/H)XGH motif; other site"
+ /db_xref="CDD:173914"
+ gene complement(3848548..3849825)
+ /locus_tag="SARI_03916"
+ CDS complement(3848548..3849825)
+ /locus_tag="SARI_03916"
+ /inference="protein motif:HMMPfam:IPR001296"
+ /inference="protein motif:HMMPfam:IPR007507"
+ /inference="similar to AA sequence:REFSEQ:NP_462624.1"
+ /note="catalyzes the transfer of
+ 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A"
+ /codon_start=1
+ /transl_table=11
+ /product="3-deoxy-D-manno-octulosonic-acid transferase"
+ /protein_id="YP_001572852.1"
+ /db_xref="GI:161505740"
+ /db_xref="InterPro:IPR001296"
+ /db_xref="InterPro:IPR007507"
+ /translation="MLELLYTALLYLIQPLIWIRLWVRGRKAPAYRKRWGERYGFYRR
+ PLKPGGIMLHSVSVGETLAAIPLVRALRHRYPDLPITVTTMTPTGSERVQSAFGSDVQ
+ HVYLPYDLPDALNRFLNKIDPKLVLIMETELWPNLIAALHKRHIPLVIANARLSARSA
+ AGYTKLGKFVRTLLRRITLIAAQNEEDGERFVALGAKNNQVTVTGSLKFDISVTPQLA
+ AKAVTLRRQWAPHRPVWIATSTHDGEESIIIAAHQALLHQFPNLLLILVPRHPERFPD
+ AINLVRQAGLSYTTRSSGEVPSASTQVVVGDTMGELMLLYGIADLAFVGGSLVERGGH
+ NPLEAAAHAIPVLMGPYTFNFKDICARLEQASGLITITDAATLAKEVSSLLTDADYRN
+ FYGRHAVEVLYQNQGALQRLLQLLEPYLPPKTH"
+ misc_feature complement(3848620..3849777)
+ /locus_tag="SARI_03916"
+ /note="3-deoxy-D-manno-octulosonic-acid transferase;
+ Reviewed; Region: PRK05749"
+ /db_xref="CDD:235589"
+ misc_feature complement(3849187..3849735)
+ /locus_tag="SARI_03916"
+ /note="3-Deoxy-D-manno-octulosonic-acid transferase
+ (kdotransferase); Region: Glycos_transf_N; pfam04413"
+ /db_xref="CDD:218074"
+ misc_feature complement(3848623..3849096)
+ /locus_tag="SARI_03916"
+ /note="Glycosyltransferases catalyze the transfer of sugar
+ moieties from activated donor molecules to specific
+ acceptor molecules, forming glycosidic bonds. The acceptor
+ molecule can be a lipid, a protein, a heterocyclic
+ compound, or another carbohydrate...; Region:
+ Glycosyltransferase_GTB_type; cl10013"
+ /db_xref="CDD:245227"
+ gene 3849862..3850050
+ /locus_tag="SARI_03917"
+ CDS 3849862..3850050
+ /locus_tag="SARI_03917"
+ /note="'Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572853.1"
+ /db_xref="GI:161505741"
+ /translation="MYLAWALPLLFPFLRQIDSKAGIQKQILIIFAFLRNLLQFAVFA
+ APGNWNDHSKLGRKLLSL"
+ gene 3850269..3851303
+ /locus_tag="SARI_03918"
+ CDS 3850269..3851303
+ /locus_tag="SARI_03918"
+ /inference="protein motif:HMMPfam:IPR002201"
+ /inference="protein motif:HMMTigr:IPR011916"
+ /inference="similar to AA sequence:INSD:AAM48169.1"
+ /note="'KEGG: sty:STY4071 8.9e-179 rfaQ, waaQ;
+ lipopolysaccharide heptosyltransferase III K02849;
+ COG: COG0859 ADP-heptose:LPS heptosyltransferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="lipopolysaccharide core biosynthesis protein"
+ /protein_id="YP_001572854.1"
+ /db_xref="GI:161505742"
+ /db_xref="InterPro:IPR002201"
+ /db_xref="InterPro:IPR011916"
+ /translation="MRFHGDMLLTTPVISTLKQNYPDAKIDVLLYQNTIPILSENPEI
+ NALYGISNKGAGTKEQIKNALSLIKKLRANQYDLVVNLTDQWSVALIVRFLDAKIKIS
+ QDFGNRQSALWKKSFTHLVPYAGDHAVERTLSALKPLALKRYVTETTMSYRPEHWENM
+ RQQLKQLGVTRQYVVIQPTARQLFKCWDNDKFSRVIDAVQRRGYQVVLTSGPATDEIA
+ CVDDIARGCETIPVTGLAGKTRFPELGALIDHADLFIGVDSAPGHIAAAVKTPVICLF
+ GATDHVFWRPWTDDMIQFWAGNYEPMPERHELDRNKKYLSVIPAEDVIAATEKMLPHE
+ ARPIDLDSLV"
+ misc_feature 3850269..3851288
+ /locus_tag="SARI_03918"
+ /note="lipopolysaccharide core biosynthesis protein;
+ Provisional; Region: PRK10422"
+ /db_xref="CDD:182447"
+ misc_feature 3850269..3851255
+ /locus_tag="SARI_03918"
+ /note="Lipopolysaccharide heptosyltransferase is involved
+ in the biosynthesis of lipooligosaccharide (LOS).
+ Lipopolysaccharide (LPS) is a major component of the outer
+ membrane of gram-negative bacteria. LPS
+ heptosyltransferase transfers heptose molecules from...;
+ Region: GT1_LPS_heptosyltransferase; cd03789"
+ /db_xref="CDD:99964"
+ misc_feature order(3850794..3850799,3850893..3850895,3850998..3851003,
+ 3851037..3851039,3851046..3851051,3851058..3851060)
+ /locus_tag="SARI_03918"
+ /note="putative active site [active]"
+ /db_xref="CDD:99964"
+ gene 3851300..3852424
+ /locus_tag="SARI_03919"
+ CDS 3851300..3852424
+ /locus_tag="SARI_03919"
+ /inference="protein motif:HMMPfam:IPR001296"
+ /inference="similar to AA sequence:INSD:AAM48168.1"
+ /note="'KEGG: stm:STM3722 2.5e-197 rfaG, waaG;
+ UDP-glucose:(heptosyl)lipopolysaccharide
+ alpha-1,3-glucosyltransferase K02844;
+ COG: COG0438 Glycosyltransferase;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572855.1"
+ /db_xref="GI:161505743"
+ /db_xref="InterPro:IPR001296"
+ /translation="MRVAFCLYKYFPFGGLQRDFMRIAQTVAARGHQVRVYAQTWEGE
+ CPDNFELIRVPVKSRTNHGRNAEYYAWVQHHLRDHPVDRVVGFNKMPGLDVYYAADVC
+ YAEKVAQEKGFFYRLTSRYRHYAAFERATFEHGKRTQLLMLTNKQLADFQKHYQTEAE
+ RFYILPPGIYPDRKYSQQIPNSRQIYRQKNGISEQQKLLLQVGSDFTRKGVDRSIEAL
+ ASLPESLRQNTVLYVVGQDKPKKFAALAERSGVGTNVHFFSGRNDIAELMAAADLLLH
+ PAYQEAAGIVLLEAITAGLPVLTSAVCGYAHYVMDANCGEAIAEPFRQEALNEILLKA
+ LTQPSLRSAWAENARHYADTQDLYSLPEKAADIITGDLDG"
+ misc_feature 3851300..3852355
+ /locus_tag="SARI_03919"
+ /note="Glycosyltransferase [Cell envelope biogenesis,
+ outer membrane]; Region: RfaG; COG0438"
+ /db_xref="CDD:223515"
+ misc_feature 3851303..3852403
+ /locus_tag="SARI_03919"
+ /note="This family is most closely related to the GT1
+ family of glycosyltransferases and named after YqgM in
+ Bacillus licheniformis about which little is known.
+ Glycosyltransferases catalyze the transfer of sugar
+ moieties from activated donor molecules to...; Region:
+ GT1_YqgM_like; cd03801"
+ /db_xref="CDD:99974"
+ gene 3852417..3853214
+ /locus_tag="SARI_03920"
+ CDS 3852417..3853214
+ /locus_tag="SARI_03920"
+ /inference="protein motif:HMMPfam:IPR010440"
+ /inference="protein motif:superfamily:IPR011009"
+ /inference="similar to AA sequence:INSD:AAM48167.1"
+ /note="'KEGG: spt:SPA3573 1.2e-137 waaP;
+ lipopolysaccharide core biosynthesis protein K02848;
+ COG: NOG06227 non supervised orthologous group;
+ Psort location: cytoskeletal, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572856.1"
+ /db_xref="GI:161505744"
+ /db_xref="InterPro:IPR010440"
+ /db_xref="InterPro:IPR011009"
+ /translation="MVELKAPLTTLWRGKDAFEEVKTLQGEVFRELETRRTLRFELDG
+ KSYFLKWHKGTSLKEIVKNLISLRMPVLGADREWHAIHRLCELGVDTMHGVGFGEKGV
+ NPLTRTSFIITEDLTPTVSLEDYCADWVVNPPDVQVKRMIIKRVATMVRKMHTGGINH
+ RDCYICHFLLHLPFTGREEDLKISVIDLHRAQIRQRVPLRWRNKDLIGLYFSSMNIGL
+ TQRDIFRFMREYFSLPLREILQKESGLIHQADVKAARIKERTIRKNL"
+ misc_feature 3852417..3853211
+ /locus_tag="SARI_03920"
+ /note="lipopolysaccharide core heptose(I) kinase RfaP;
+ Provisional; Region: PRK15123"
+ /db_xref="CDD:237915"
+ gene 3853251..3854192
+ /locus_tag="SARI_03921"
+ CDS 3853251..3854192
+ /locus_tag="SARI_03921"
+ /inference="protein motif:HMMPfam:IPR012477"
+ /inference="similar to AA sequence:INSD:AAM88836.1"
+ /note="'KEGG: pmu:PM0508 8.1e-27
+ CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,
+ 3-sialyltransferase K00785;
+ COG: NOG15044 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572857.1"
+ /db_xref="GI:161505745"
+ /db_xref="InterPro:IPR012477"
+ /translation="MFLFICMTNLQLLIARSIIEKEQLKSVDILFIGDVHNVKNQYYL
+ KKIQPLCRHSSIVSQVSKFAAFKTIHRTRYAKKIMESYAKEYHTVFFANFHVPLIHHI
+ LSCISFSEINTFDDGTNNINQKSIMYENKNISSTSKLIRKLMGRKYHKDEILKLDAKD
+ YTLFPNRTNIIEKTEGIILVHHNGLPDTNNGFKKVLLGTVYTDALKNKEDECVFLQHL
+ QRFIKKKAVDIYIPHPRYDSHQFNGVLNVNSEMIAEDIILEYLEQGMSLEIYGFNSTV
+ QYNLNNISTIKNYKITSPFLKDSFNHGLGFDFNQVSV"
+ misc_feature 3853320..3854132
+ /locus_tag="SARI_03921"
+ /note="Glycosyltransferase family 52; Region:
+ Glyco_transf_52; pfam07922"
+ /db_xref="CDD:219644"
+ gene 3854266..3855357
+ /locus_tag="SARI_03922"
+ CDS 3854266..3855357
+ /locus_tag="SARI_03922"
+ /inference="protein motif:HMMPfam:IPR001296"
+ /inference="similar to AA sequence:INSD:AAM48165.1"
+ /note="'KEGG: sec:SC3642 3.5e-184 rfaB;
+ UDP-D-galactose:(glucosyl)lipopolysaccharide-1,
+ 6-D-galactosyltransferase K02840;
+ COG: COG0438 Glycosyltransferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="UDP-D-galactose:(glucosyl)lipopolysaccharide-1,
+ 6-D-galactosyltransferase"
+ /protein_id="YP_001572858.1"
+ /db_xref="GI:161505746"
+ /db_xref="InterPro:IPR001296"
+ /translation="MVTSLKIAFIGEAVSGFGGMETVISYVIHTFEKNAPKMNCEMFF
+ FCRNDKMDKAWLENIKYTQSFSNIKLRFLRRTKHIYNFSQWLKEASPDIVICIDVISC
+ LYANKARKKSGRYFTIFSWPHFSLEHKKHAECITYADYHLAISSGIKEQMIARGISAQ
+ DVSVVYNPVSIKTIIVPPPERDKPAVFLYVGRLKFEGQKRVKDLFDGLARTTGEWQLH
+ IIGDGSDYERCQAYSRELGIEQRVIWYGWQSAPWVVVQQKVKNVTALLLTSAFEGFPM
+ TLLEAMSYGIPCISSDCMSGPRDMIKPGINGELYAPGAIDDFVGHLNQVISGEVQYQH
+ AIIPGTIERFYDMLYFKNFKNALFSKLQK"
+ misc_feature 3854278..3855354
+ /locus_tag="SARI_03922"
+ /note="UDP-D-galactose:(glucosyl)lipopolysaccharide-1,
+ 6-D-galactosyltransferase; Provisional; Region: PRK09922"
+ /db_xref="CDD:182148"
+ misc_feature 3854281..3855273
+ /locus_tag="SARI_03922"
+ /note="This family is most closely related to the GT1
+ family of glycosyltransferases. WabH in Klebsiella
+ pneumoniae has been shown to transfer a GlcNAc residue
+ from UDP-GlcNAc onto the acceptor GalUA residue in the
+ cellular outer core; Region: GT1_WabH_like; cd03811"
+ /db_xref="CDD:99982"
+ misc_feature order(3854320..3854322,3854833..3854841,3855016..3855018,
+ 3855094..3855096)
+ /locus_tag="SARI_03922"
+ /note="putative ADP-binding pocket [chemical binding];
+ other site"
+ /db_xref="CDD:99982"
+ gene 3855363..3856376
+ /locus_tag="SARI_03923"
+ CDS 3855363..3856376
+ /locus_tag="SARI_03923"
+ /inference="protein motif:HMMPfam:IPR002495"
+ /inference="protein motif:HMMPfam:IPR013645"
+ /inference="similar to AA sequence:INSD:AAM48164.1"
+ /note="'KEGG: stt:t3801 1.1e-171 waaI; lipopolysaccharide
+ 1,3-galactosyltransferase K03278;
+ COG: COG1442 Lipopolysaccharide biosynthesis proteins,
+ LPS:glycosyltransferases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572859.1"
+ /db_xref="GI:161505747"
+ /db_xref="InterPro:IPR002495"
+ /db_xref="InterPro:IPR013645"
+ /translation="MSRKYFEEEVIQQTLDYNYTQHSDANKLNIAYGIDKNFLFGCGV
+ SIASILLANPAKALAFHVFTDSFGPEDRQRFDALAKQYATQIIVYLIDCERLKSLPST
+ KNWTYATYFRFIIADYFSDKADKVLYLDADIACKGSIQKLIDLNFAENEIAAVVAEGE
+ LEWWTKRSVSLATPGLVSGYFNAGFILINIPLWTAENISKKAIEMLKDPEVVQRITHL
+ DQDVLNILLVNKARFVDKNFNTQFSLNYELKDSVINPVNADTVFVHYIGPTKPWHSWG
+ AYPVSQYFLQAKLNSPWSDYALLNPVTSHQLRYAAKHMFNQKRYTSGIAYYIAYFKRK
+ LLE"
+ misc_feature 3855369..3856370
+ /locus_tag="SARI_03923"
+ /note="lipopolysaccharide 1,3-galactosyltransferase;
+ Provisional; Region: PRK15171"
+ /db_xref="CDD:185093"
+ misc_feature 3855444..3856184
+ /locus_tag="SARI_03923"
+ /note="A4GalT_like proteins catalyze the addition of
+ galactose or glucose residues to the lipooligosaccharide
+ (LOS) or lipopolysaccharide (LPS) of the bacterial cell
+ surface; Region: GT8_A4GalT_like; cd04194"
+ /db_xref="CDD:133037"
+ misc_feature order(3855459..3855467,3855471..3855476,3855687..3855689,
+ 3855696..3855698,3855750..3855758,3855834..3855836,
+ 3855906..3855914,3856017..3856022,3856086..3856088,
+ 3856152..3856154,3856158..3856163,3856170..3856172)
+ /locus_tag="SARI_03923"
+ /note="Ligand binding site; other site"
+ /db_xref="CDD:133037"
+ misc_feature order(3855750..3855752,3855756..3855758,3856152..3856154)
+ /locus_tag="SARI_03923"
+ /note="metal-binding site"
+ /db_xref="CDD:133037"
+ misc_feature 3856194..3856364
+ /locus_tag="SARI_03923"
+ /note="Glycosyl transferase family 8 C-terminal; Region:
+ Glyco_transf_8C; pfam08437"
+ /db_xref="CDD:149484"
+ gene 3856394..3857404
+ /locus_tag="SARI_03924"
+ CDS 3856394..3857404
+ /locus_tag="SARI_03924"
+ /inference="protein motif:HMMPfam:IPR002495"
+ /inference="protein motif:HMMPfam:IPR013645"
+ /inference="similar to AA sequence:INSD:AAM48163.1"
+ /note="'KEGG: stm:STM3717 1.8e-171 rfaJ, waaJ;
+ UDP-D-glucose:(galactosyl)lipopolysaccharide
+ alpha-1,2-glucosyltransferase K03279;
+ COG: COG1442 Lipopolysaccharide biosynthesis proteins,
+ LPS:glycosyltransferases;
+ Psort location: cytoskeletal, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572860.1"
+ /db_xref="GI:161505748"
+ /db_xref="InterPro:IPR002495"
+ /db_xref="InterPro:IPR013645"
+ /translation="MDSFPDIEIAEYKVFDESNNNDDNVLNISYGVDENYLDGVGVSI
+ ASVLLNNNIPLAFHIICDSYSPCFLNNVERLAVQYHIKISLYLIKVESLEILPQTKVW
+ SRAMYFRLFAFDYLSGKINTLLYLDADVVCKGSLQDLLRLDLSEKIAAVVKDVDSIQN
+ RVNERLEAFNLQGDYFNSGVVFVNLKLWKENTLTEKAFLLLAGKEADSFKYPDQDVLN
+ ILLQDKVVYLPRPYNTIYTIKSELKDKTHKKYTNIINDNTILIHYTGATKPWHAWANY
+ PSVIYYKNARLNSPWKDFPGKDARTIVEFKKRYKHLFVQGHYFKGLLAGSAYLYRKVF
+ HK"
+ misc_feature 3856436..3857395
+ /locus_tag="SARI_03924"
+ /note="lipopolysaccharide 1,3-galactosyltransferase;
+ Provisional; Region: PRK15171"
+ /db_xref="CDD:185093"
+ misc_feature 3856469..3857206
+ /locus_tag="SARI_03924"
+ /note="A4GalT_like proteins catalyze the addition of
+ galactose or glucose residues to the lipooligosaccharide
+ (LOS) or lipopolysaccharide (LPS) of the bacterial cell
+ surface; Region: GT8_A4GalT_like; cd04194"
+ /db_xref="CDD:133037"
+ misc_feature order(3856484..3856492,3856496..3856501,3856709..3856711,
+ 3856718..3856720,3856772..3856780,3856853..3856855,
+ 3856922..3856930,3857030..3857035,3857099..3857101,
+ 3857177..3857179,3857183..3857188,3857195..3857197)
+ /locus_tag="SARI_03924"
+ /note="Ligand binding site; other site"
+ /db_xref="CDD:133037"
+ misc_feature order(3856772..3856774,3856778..3856780,3857177..3857179)
+ /locus_tag="SARI_03924"
+ /note="metal-binding site"
+ /db_xref="CDD:133037"
+ misc_feature 3857219..3857389
+ /locus_tag="SARI_03924"
+ /note="Glycosyl transferase family 8 C-terminal; Region:
+ Glyco_transf_8C; pfam08437"
+ /db_xref="CDD:149484"
+ gene 3857427..3858125
+ /locus_tag="SARI_03925"
+ CDS 3857427..3858125
+ /locus_tag="SARI_03925"
+ /inference="protein motif:HMMPfam:IPR009330"
+ /inference="protein motif:superfamily:IPR002130"
+ /inference="similar to AA sequence:INSD:AAM48162.1"
+ /note="'KEGG: stt:t3803 1.6e-115 waaY; lipopolysaccharide
+ core biosynthesis protein K02850;
+ COG: NOG10262 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="lipopolysaccharide core biosynthesis protein"
+ /protein_id="YP_001572861.1"
+ /db_xref="GI:161505749"
+ /db_xref="InterPro:IPR002130"
+ /db_xref="InterPro:IPR009330"
+ /translation="MITEKKVKNYTVFVKKDGEKYIEIFKDFLSYNHQVIKVFRNIED
+ TKVVLIDTDYGKYILKVFSPKVKSTERFFKSLVKGDYYENLFHQTDRVRREGFEALND
+ FYLLAEIKTLRYVKTYVMLIEYIEGVELVDMPEISDGVREKIKQSIFSLHQHGMVSGD
+ PHKGNFILQGNEIRIIDLSGKRPSRQRQAKDRIDLERHYGIKNNVKDFGFYLLIYKKK
+ IRNFLRRIKGKEKR"
+ misc_feature 3857427..3858113
+ /locus_tag="SARI_03925"
+ /note="Lipopolysaccharide core biosynthesis protein
+ (WaaY); Region: WaaY; pfam06176"
+ /db_xref="CDD:114869"
+ gene 3858275..3859084
+ /locus_tag="SARI_03926"
+ CDS 3858275..3859084
+ /locus_tag="SARI_03926"
+ /inference="similar to AA sequence:INSD:AAM48161.1"
+ /note="'COG: NOG06879 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="lipopolysaccharide core biosynthesis protein"
+ /protein_id="YP_001572862.1"
+ /db_xref="GI:161505750"
+ /translation="MGSVKFITHADVLQLIAKRTAEDCIIFLSGPTSRKTPLSLLRMK
+ DVIAVNGSVQYLLNNNVKPFLYLLTDVRFLHRRREDFYKFSSNSQFTIVNLDVYEQAG
+ EDDKKYIQENCLIIRSFYRREKGGVLKKIKFNFLKQVYKALLISVPFSKRGRLTGFSK
+ DISIGYCSCHTIAYTAIQVAYSLKYNRIICSGLDLTGSCPRFYDEASGPMPSELSKDL
+ FKILPFFTFMRKNVSDLNIFNLSDDTAIHYDIIPYIKASEIEDEIYYDKIV"
+ misc_feature 3858275..3859081
+ /locus_tag="SARI_03926"
+ /note="lipopolysaccharide core biosynthesis protein;
+ Provisional; Region: PRK09822"
+ /db_xref="CDD:182095"
+ gene complement(3859196..3859351)
+ /locus_tag="SARI_03927"
+ CDS complement(3859196..3859351)
+ /locus_tag="SARI_03927"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572863.1"
+ /db_xref="GI:161505751"
+ /translation="MKTQGPLHFPHLVTLLIGKHTVNIINHAVARHKFCEVIAIMPSN
+ TNPQIPP"
+ gene complement(3859473..3860687)
+ /locus_tag="SARI_03928"
+ CDS complement(3859473..3860687)
+ /locus_tag="SARI_03928"
+ /inference="protein motif:HMMPfam:IPR007016"
+ /inference="similar to AA sequence:INSD:AAS22256.1"
+ /note="'KEGG: sec:SC3636 2.3e-203 waaL; hypothetical
+ protein K02847;
+ COG: COG3307 Lipid A core - O-antigen ligase and related
+ enzymes;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572864.1"
+ /db_xref="GI:161505752"
+ /db_xref="InterPro:IPR007016"
+ /translation="MLTTSLTLNKEKWKPTWNKALVFLFVATYFLDGITRYKHLIVIL
+ MIITAIYQVSRSPKNFSHLFKNSVFYSVAALSLILVYSVLISPDMKESFKEFENTVLE
+ GFLLYTLLIPVLLKDETKETVAKIVLFSFLTSLGLRALVEIVLYIQDYSRGVMPFTNY
+ DHRHISDSMVFLFPALLNIWLFRKTSLKLAFFALSAVYLFLMLGTLSRGAWLAVLVVG
+ VLWAILNRQWKLMGIGAAILVIAGALVITQQIHKPNQDRLLYKLQQTDSSYRYTNGTQ
+ GTAWILIQENPFKGYGYSNEVYDSIYNKRVVDYPTWTFKESIGPHNTILYIWFSAGIL
+ GLASLAYLYGAIIRETASSTFKKVEISPYNAHLLLLLSFIGFYIVRGNFEQVDIDQIG
+ IITGFLLALRNK"
+ misc_feature complement(3859485..3860687)
+ /locus_tag="SARI_03928"
+ /note="Lipid A core - O-antigen ligase and related enzymes
+ [Cell envelope biogenesis, outer membrane]; Region: RfaL;
+ COG3307"
+ /db_xref="CDD:225844"
+ misc_feature complement(3859476..3860675)
+ /locus_tag="SARI_03928"
+ /note="O-antigen ligase RfaL; Provisional; Region:
+ PRK15487"
+ /db_xref="CDD:185384"
+ gene complement(3860727..3861680)
+ /locus_tag="SARI_03929"
+ CDS complement(3860727..3861680)
+ /locus_tag="SARI_03929"
+ /inference="protein motif:HMMPfam:IPR002201"
+ /inference="protein motif:HMMTigr:IPR011908"
+ /inference="protein motif:ScanRegExp:IPR000669"
+ /inference="similar to AA sequence:REFSEQ:NP_458215.1"
+ /note="'KEGG: stt:t3807 3.1e-169 waaC; lipopolysaccharide
+ heptosyltransferase-1 K02841;
+ COG: COG0859 ADP-heptose:LPS heptosyltransferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="ADP-heptose:LPS heptosyl transferase I"
+ /protein_id="YP_001572865.1"
+ /db_xref="GI:161505753"
+ /db_xref="InterPro:IPR000669"
+ /db_xref="InterPro:IPR002201"
+ /db_xref="InterPro:IPR011908"
+ /translation="MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIQFDWVVEEGFAQI
+ PSWHSAVDRVIPVAIRRWRKAWFSAPIKAERTAFRRAVCAYQYDAVIDAQGLVKSAAL
+ VTRLAHGIKHGMDWSTAREPLASLFYNRKYHIAKQQHAVERTRELFAKSLGYDKPQSQ
+ GDYAIAKHFLHGQQAVSDPYAVFLHATTRDDKHWPEANWRELIGLVGNTGLRIKLPWG
+ APHEEARAKRLAEGFDYVDVLPRMSLEEVARVLAGAKFVVSVDTGLSHLTAALDRPNI
+ TLYGPTDPGLIGGYGKNQMACCSPEQNLANLDATSVFGKIH"
+ misc_feature complement(3860730..3861680)
+ /locus_tag="SARI_03929"
+ /note="ADP-heptose:LPS heptosyltransferase [Cell envelope
+ biogenesis, outer membrane]; Region: RfaF; COG0859"
+ /db_xref="CDD:223928"
+ misc_feature complement(3860772..3861677)
+ /locus_tag="SARI_03929"
+ /note="Lipopolysaccharide heptosyltransferase is involved
+ in the biosynthesis of lipooligosaccharide (LOS).
+ Lipopolysaccharide (LPS) is a major component of the outer
+ membrane of gram-negative bacteria. LPS
+ heptosyltransferase transfers heptose molecules from...;
+ Region: GT1_LPS_heptosyltransferase; cd03789"
+ /db_xref="CDD:99964"
+ misc_feature complement(order(3860880..3860882,3860889..3860894,
+ 3860901..3860903,3860937..3860942,3861033..3861035,
+ 3861129..3861134))
+ /locus_tag="SARI_03929"
+ /note="putative active site [active]"
+ /db_xref="CDD:99964"
+ gene complement(3861680..3862726)
+ /locus_tag="SARI_03930"
+ CDS complement(3861680..3862726)
+ /locus_tag="SARI_03930"
+ /inference="protein motif:HMMPfam:IPR002201"
+ /inference="protein motif:HMMTigr:IPR011910"
+ /inference="similar to AA sequence:REFSEQ:YP_152676.1"
+ /note="catalyzes the transfer of the second heptose to the
+ heptosyl-KDO2 moiety of the lipopolysaccharide inner core"
+ /codon_start=1
+ /transl_table=11
+ /product="ADP-heptose:LPS heptosyltransferase II"
+ /protein_id="YP_001572866.1"
+ /db_xref="GI:161505754"
+ /db_xref="InterPro:IPR002201"
+ /db_xref="InterPro:IPR011910"
+ /translation="MKILVIGPSWVGDMMMSQSLYRTLKARYPQAIIDVMAPAWCRPL
+ LSRMPEVNEAIPMPLGHGALEIGKRRRLGHSLREKRYDRALVLPNSFKSALVPFFANI
+ PHRTGWRGEMRYGLLNDARILDKDAWPLMVERYVALAYDKGVMRTAKDLPQPLLWPQL
+ QVSEGEKSLICSDFSLSTERPLIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVL
+ FGSAKDHEAGNEIQAALNSEQQSWCRNLAGETQLEQAVILIAACKAIVTNDSGLMHIA
+ AALDRPLVALYGPSSPDFTPPLSHKARVIRLITGYHKVRKGDTAQGYHQSLIDITPQR
+ VLEELHPLLSEEGV"
+ misc_feature complement(3861689..3862726)
+ /locus_tag="SARI_03930"
+ /note="ADP-heptose:LPS heptosyltransferase [Cell envelope
+ biogenesis, outer membrane]; Region: RfaF; COG0859"
+ /db_xref="CDD:223928"
+ misc_feature complement(3861707..3862723)
+ /locus_tag="SARI_03930"
+ /note="Lipopolysaccharide heptosyltransferase is involved
+ in the biosynthesis of lipooligosaccharide (LOS).
+ Lipopolysaccharide (LPS) is a major component of the outer
+ membrane of gram-negative bacteria. LPS
+ heptosyltransferase transfers heptose molecules from...;
+ Region: GT1_LPS_heptosyltransferase; cd03789"
+ /db_xref="CDD:99964"
+ misc_feature complement(order(3861902..3861904,3861911..3861916,
+ 3861923..3861925,3861959..3861964,3862070..3862072,
+ 3862169..3862174))
+ /locus_tag="SARI_03930"
+ /note="putative active site [active]"
+ /db_xref="CDD:99964"
+ gene complement(3862729..3863661)
+ /gene="rfaD"
+ /locus_tag="SARI_03931"
+ CDS complement(3862729..3863661)
+ /gene="rfaD"
+ /locus_tag="SARI_03931"
+ /inference="protein motif:HMMPfam:IPR001509"
+ /inference="protein motif:HMMTigr:IPR011912"
+ /inference="similar to AA sequence:INSD:"
+ /note="catalyzes the interconversion between
+ ADP-D-glycero-beta-D-manno-heptose and
+ ADP-L-glycero-beta-D-manno-heptose"
+ /codon_start=1
+ /transl_table=11
+ /product="ADP-L-glycero-D-mannoheptose-6-epimerase"
+ /protein_id="YP_001572867.1"
+ /db_xref="GI:161505755"
+ /db_xref="InterPro:IPR001509"
+ /db_xref="InterPro:IPR011912"
+ /translation="MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKEGTKFVNLVD
+ LNIADYMDKEDFLIQIMSGEELGDIEAVFHEGACSSTTEWDGKYMMDNNYQYSKELLH
+ YCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANS
+ QIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVA
+ DVNLWFLESGKSGIFNLGTGRAESFQAVADATLAYHKKGSIEYIPFPDKLKGRYQAFT
+ QADLTNLRNAGYDKPFKTVAEGVTEYMAWLNRDA"
+ misc_feature complement(3862738..3863661)
+ /gene="rfaD"
+ /locus_tag="SARI_03931"
+ /note="ADP-L-glycero-D-mannoheptose 6-epimerase (GME),
+ extended (e) SDRs; Region: ADP_GME_SDR_e; cd05248"
+ /db_xref="CDD:187559"
+ misc_feature complement(3862738..3863661)
+ /gene="rfaD"
+ /locus_tag="SARI_03931"
+ /note="ADP-L-glycero-D-mannoheptose-6-epimerase;
+ Provisional; Region: rfaD; PRK11150"
+ /db_xref="CDD:182998"
+ misc_feature complement(order(3863128..3863133,3863152..3863154,
+ 3863158..3863163,3863230..3863232,3863242..3863244,
+ 3863314..3863322,3863374..3863376,3863386..3863388,
+ 3863398..3863400,3863425..3863427,3863431..3863439,
+ 3863503..3863505,3863548..3863550,3863566..3863574,
+ 3863629..3863637,3863644..3863649))
+ /gene="rfaD"
+ /locus_tag="SARI_03931"
+ /note="NADP binding site [chemical binding]; other site"
+ /db_xref="CDD:187559"
+ misc_feature complement(order(3863203..3863205,3863212..3863217,
+ 3863224..3863226,3863236..3863238,3863245..3863259,
+ 3863269..3863271,3863368..3863370,3863380..3863382,
+ 3863392..3863394,3863401..3863412,3863506..3863508,
+ 3863512..3863529,3863533..3863538,3863545..3863547,
+ 3863551..3863556,3863560..3863565))
+ /gene="rfaD"
+ /locus_tag="SARI_03931"
+ /note="homopentamer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:187559"
+ misc_feature complement(order(3862933..3862935,3863035..3863037,
+ 3863101..3863103,3863110..3863112,3863116..3863124,
+ 3863155..3863157,3863419..3863421))
+ /gene="rfaD"
+ /locus_tag="SARI_03931"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:187559"
+ misc_feature complement(order(3863230..3863232,3863242..3863244,
+ 3863314..3863316,3863383..3863385))
+ /gene="rfaD"
+ /locus_tag="SARI_03931"
+ /note="active site"
+ /db_xref="CDD:187559"
+ gene 3863864..3865060
+ /locus_tag="SARI_03932"
+ CDS 3863864..3865060
+ /locus_tag="SARI_03932"
+ /inference="protein motif:HMMPfam:IPR004839"
+ /inference="protein motif:HMMTigr:IPR011282"
+ /inference="protein motif:ScanRegExp:IPR001917"
+ /inference="similar to AA sequence:INSD:AAV79362.1"
+ /note="catalyzes the formation of 2-amino-3-oxobutanoate
+ from acetyl-CoA and glycine"
+ /codon_start=1
+ /transl_table=11
+ /product="2-amino-3-ketobutyrate coenzyme A ligase"
+ /protein_id="YP_001572868.1"
+ /db_xref="GI:161505756"
+ /db_xref="InterPro:IPR001917"
+ /db_xref="InterPro:IPR004839"
+ /db_xref="InterPro:IPR011282"
+ /translation="MRGDFYKQLTNDLETARAEGLFKEERIITSAQQADITVADGSHV
+ INFCANNYLGLANHPELINAAKAGMDSHGFGMASVRFICGTQDSHKALEQKLASFLGM
+ EDAILYSSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMAE
+ LEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFV
+ GENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAARKEVVEWLRQRSRPYLFSNS
+ LAPAIVAASIKVLEMVEAGAELRDRLWANARQFREQMSAAGFTLAGADHAIIPVMLGD
+ AVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVDAFTRIGK
+ QLGVIA"
+ misc_feature 3863888..3865054
+ /locus_tag="SARI_03932"
+ /note="pyridoxal phosphate-dependent acyltransferase,
+ putative; Region: gly_Cac_T_rel; TIGR01825"
+ /db_xref="CDD:130884"
+ misc_feature 3863987..3865036
+ /locus_tag="SARI_03932"
+ /note="KBL_like; this family belongs to the pyridoxal
+ phosphate (PLP)-dependent aspartate aminotransferase
+ superfamily (fold I). The major groups in this CD
+ corresponds to serine palmitoyltransferase (SPT),
+ 5-aminolevulinate synthase (ALAS); Region: KBL_like;
+ cd06454"
+ /db_xref="CDD:99747"
+ misc_feature order(3864011..3864013,3864191..3864199,3864269..3864271,
+ 3864404..3864406,3864416..3864421,3864491..3864493,
+ 3864497..3864502,3864584..3864586,3864593..3864595,
+ 3864965..3864967)
+ /locus_tag="SARI_03932"
+ /note="substrate-cofactor binding pocket; other site"
+ /db_xref="CDD:99747"
+ misc_feature order(3864191..3864199,3864269..3864271,3864404..3864406,
+ 3864416..3864418,3864491..3864493,3864497..3864502,
+ 3864584..3864586,3864593..3864595)
+ /locus_tag="SARI_03932"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:99747"
+ misc_feature 3864593..3864595
+ /locus_tag="SARI_03932"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:99747"
+ gene 3865070..3866095
+ /gene="tdh"
+ /locus_tag="SARI_03933"
+ CDS 3865070..3866095
+ /gene="tdh"
+ /locus_tag="SARI_03933"
+ /inference="protein motif:BlastProDom:IPR011597"
+ /inference="protein motif:HMMPanther:IPR002085"
+ /inference="protein motif:HMMPfam:IPR013149"
+ /inference="protein motif:HMMPfam:IPR013154"
+ /inference="protein motif:HMMTigr:IPR004627"
+ /inference="protein motif:ScanRegExp:IPR002328"
+ /inference="protein motif:superfamily:IPR011032"
+ /inference="similar to AA sequence:INSD:AAV79361.1"
+ /note="'converts threonine and NAD to
+ 1,2-amino-3-oxobutanoate and NADH; functions in threonine
+ catabolism'"
+ /codon_start=1
+ /transl_table=11
+ /product="L-threonine 3-dehydrogenase"
+ /protein_id="YP_001572869.1"
+ /db_xref="GI:161505757"
+ /db_xref="InterPro:IPR002085"
+ /db_xref="InterPro:IPR002328"
+ /db_xref="InterPro:IPR004627"
+ /db_xref="InterPro:IPR011032"
+ /db_xref="InterPro:IPR011597"
+ /db_xref="InterPro:IPR013149"
+ /db_xref="InterPro:IPR013154"
+ /translation="MKALSKLKAEEGIWMTDVPEPEVGHNDLLIKIRKTAICGTDVHI
+ YNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFNIGDRVSGEGHITCGHCRNCRGG
+ RTHLCRNTTGVGVNRPGCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSF
+ DLVGEDVLVSGAGPIGVMAAAVAKHVGARHVVITDVNEYRLELARKMGVTRAVNVAKE
+ SLTDVMAELGMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPADMSIDWTKV
+ IFKGLFIKGIYGREMFETWYKMAALIQSGLDLSPIITHRFSIDDFQKGFDAMRSGQSG
+ KVILSWD"
+ misc_feature 3865070..3866092
+ /gene="tdh"
+ /locus_tag="SARI_03933"
+ /note="L-threonine 3-dehydrogenase; Validated; Region:
+ tdh; PRK05396"
+ /db_xref="CDD:180054"
+ misc_feature 3865070..3866083
+ /gene="tdh"
+ /locus_tag="SARI_03933"
+ /note="Medium chain reductase/dehydrogenase
+ (MDR)/zinc-dependent alcohol dehydrogenase-like family;
+ Region: MDR; cl16912"
+ /db_xref="CDD:247637"
+ misc_feature order(3865181..3865189,3865196..3865198,3865511..3865513,
+ 3865523..3865525,3865580..3865597,3865652..3865657,
+ 3865667..3865669,3865712..3865714,3865784..3865789,
+ 3865853..3865858,3865925..3865933)
+ /gene="tdh"
+ /locus_tag="SARI_03933"
+ /note="NAD(P) binding site [chemical binding]; other site"
+ /db_xref="CDD:176178"
+ gene 3866389..3867423
+ /locus_tag="SARI_03934"
+ CDS 3866389..3867423
+ /locus_tag="SARI_03934"
+ /inference="protein motif:HMMPfam:IPR001173"
+ /inference="similar to AA sequence:REFSEQ:NP_458220.1"
+ /note="'KEGG: sty:STY4088 8.1e-185 putative
+ glycosyltransferase;
+ COG: COG0463 Glycosyltransferases involved in cell wall
+ biogenesis;
+ Psort location: extracellular, including cell wall, score:
+ 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative glycosyl transferase"
+ /protein_id="YP_001572870.1"
+ /db_xref="GI:161505758"
+ /db_xref="InterPro:IPR001173"
+ /translation="MKNSKTKVSIIIPLYNAGADFNACMASLIAQTWSALEIIIVNDG
+ STDHSVEIAKHYAEHYPHVRLLHQANAGASVARNLGLQAATGDYVAFVDADDLVYPKM
+ YETLMTMALNDDLDVAQCNADWCARKTGHAWQSIPTDRLCSTGVLSGPDWLRMALASR
+ RWTHVVWMGVYRRALIIDNNITFVPGLHHQDILWSTEVMFNATRVRYTEQSLYKYFLD
+ DNSVSRLQRQGNKNLNYQRHYIKITRLLEKLNRDYARRIPIYPEFRQQITWEALRVCH
+ AVRKEPDILTRQRMIAEIFTSGMYRRMMANVRSAKAAYQTLLWSFRLWQWRDKTLSHR
+ RMARKALNLS"
+ misc_feature 3866389..3867372
+ /locus_tag="SARI_03934"
+ /note="putative glycosyl transferase; Provisional; Region:
+ PRK10073"
+ /db_xref="CDD:182223"
+ misc_feature 3866416..>3866775
+ /locus_tag="SARI_03934"
+ /note="Glycosyltransferase family A (GT-A) includes
+ diverse families of glycosyl transferases with a common
+ GT-A type structural fold; Region: Glyco_tranf_GTA_type;
+ cd00761"
+ /db_xref="CDD:132997"
+ misc_feature order(3866425..3866427,3866431..3866433,3866509..3866511,
+ 3866665..3866667,3866671..3866673)
+ /locus_tag="SARI_03934"
+ /note="active site"
+ /db_xref="CDD:132997"
+ gene complement(3867410..3868372)
+ /locus_tag="SARI_03935"
+ CDS complement(3867410..3868372)
+ /locus_tag="SARI_03935"
+ /inference="protein motif:HMMPfam:IPR006837"
+ /inference="similar to AA sequence:INSD:CAD03288.1"
+ /note="'COG: COG2861 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572871.1"
+ /db_xref="GI:161505759"
+ /db_xref="InterPro:IPR006837"
+ /translation="MPQFRRTILTLATLLAFAQPVFAGKLAIVIDDFGYRPHTENQVL
+ ALPPDISVAVLPNAPQAREMATKAHNSGHEVLIHLPMAPLSKQPLEKDTLRPEMSSDE
+ IDRIIREAVKNVPYAVGLNNHMGSAMTSSLFGMQKVMQALEHYNLYFLDSMTIGNSQA
+ MRAASGTGVKVIKRKVFLDDTQNEADIRRQFNRAIELARRNGSAIAIGHPHPATVRVL
+ QQMVYRLPADITLVRPSSLLNEPQVDTSRPDLTPQKIDAPRNPFRGVKVCKPKKPLQP
+ VYATRFFSVIGESITQSSVVAWFQHQWQGWGKIAAPKNVSAKTD"
+ misc_feature complement(3867662..3868300)
+ /locus_tag="SARI_03935"
+ /note="Putative catalytic domain of family 2
+ polysaccharide deacetylases (DACs) from bacteria; Region:
+ CE4_DAC2; cd10936"
+ /db_xref="CDD:200562"
+ misc_feature complement(order(3867746..3867748,3867752..3867754,
+ 3867917..3867919,3868004..3868006,3868010..3868012,
+ 3868127..3868141,3868277..3868288))
+ /locus_tag="SARI_03935"
+ /note="NodB motif; other site"
+ /db_xref="CDD:200562"
+ misc_feature complement(order(3867746..3867748,3867998..3868006,
+ 3868139..3868141,3868277..3868282))
+ /locus_tag="SARI_03935"
+ /note="putative active site [active]"
+ /db_xref="CDD:200562"
+ misc_feature complement(order(3867746..3867748,3868280..3868282))
+ /locus_tag="SARI_03935"
+ /note="putative catalytic site [active]"
+ /db_xref="CDD:200562"
+ misc_feature complement(order(3868004..3868006,3868139..3868141,
+ 3868277..3868279))
+ /locus_tag="SARI_03935"
+ /note="Zn binding site [ion binding]; other site"
+ /db_xref="CDD:200562"
+ gene complement(3868376..3869659)
+ /locus_tag="SARI_03936"
+ CDS complement(3868376..3869659)
+ /locus_tag="SARI_03936"
+ /inference="protein motif:HMMPfam:IPR002886"
+ /inference="protein motif:superfamily:IPR011054"
+ /inference="similar to AA sequence:INSD:AAX67534.1"
+ /note="'KEGG: cya:CYA_1627 1.6e-28 peptidase, M23B family;
+ COG: COG4942 Membrane-bound metallopeptidase;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572872.1"
+ /db_xref="GI:161505760"
+ /db_xref="InterPro:IPR002886"
+ /db_xref="InterPro:IPR011054"
+ /translation="MRGKAINTIQQAVKPRTFSVRPLFYASVLSAGVLLCAFSAHADD
+ RDQLKSIQADIAAKERAVRQQQQQRASLLAQLKAQEEAISAAARKLRETQNTLEQLNA
+ QIDEMNASIAKLEQQKAIQERNLAAQLDAAFRQGEHTGIQLILSGEESQRGQRLQAYF
+ GYLNQARQETIAELKQTREQAASQKAELEEKQSQQQTLLYEQRAQQAKLEQARNERKK
+ TLAGLESSIQQGQQQLSELRANESRLRNSIARAEAAAKARAEREAREAQAVRDKQQEA
+ SRKGTTYKPTESERSLMSRTGGLGAPRGQAYWPVRGPILHRYGERLQGELRWKGMVIG
+ ASEGTEVKAIADGRVILADWLQGYGLVVVVEHGKGDMSLYGYNQSALVSVGAQVRAGQ
+ PIALVGSSGGQGRPSLYFEIRRQGQAVNPQPWLGR"
+ misc_feature complement(3868379..3869659)
+ /locus_tag="SARI_03936"
+ /note="AmiB activator; Provisional; Region: PRK11637"
+ /db_xref="CDD:236942"
+ misc_feature complement(<3868982..3869209)
+ /locus_tag="SARI_03936"
+ /note="putative uroporphyrinogen III C-methyltransferase;
+ Provisional; Region: PRK10920"
+ /db_xref="CDD:236795"
+ misc_feature complement(3868397..3868678)
+ /locus_tag="SARI_03936"
+ /note="Peptidase family M23; Region: Peptidase_M23;
+ pfam01551"
+ /db_xref="CDD:216566"
+ gene complement(3869669..3871192)
+ /locus_tag="SARI_03937"
+ CDS complement(3869669..3871192)
+ /locus_tag="SARI_03937"
+ /inference="protein motif:BlastProDom:IPR005995"
+ /inference="protein motif:HMMPfam:IPR006124"
+ /inference="protein motif:HMMPfam:IPR011258"
+ /inference="protein motif:HMMPIR:IPR005995"
+ /inference="protein motif:HMMTigr:IPR005995"
+ /inference="similar to AA sequence:INSD:AAL22563.1"
+ /note="catalyzes the interconversion of 2-phosphoglycerate
+ and 3-phosphoglycerate"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphoglyceromutase"
+ /protein_id="YP_001572873.1"
+ /db_xref="GI:161505761"
+ /db_xref="InterPro:IPR005995"
+ /db_xref="InterPro:IPR006124"
+ /db_xref="InterPro:IPR011258"
+ /translation="MVLVILDGYGYREEQQDNAILNAKTPVMDALWAKRPHTLIDASG
+ LEVGLPDRQMGNSEVGHVNLGAGRIVYQDLTRLDVEIKERTFFANPVLTNAVDQAKNA
+ GKAVHIMGLLSAGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPRSAEASLK
+ KFEDKFAALGKGRVASIVGRYYAMDRDNRWDRVEKAYDLMTLAQGEFQADTAVAGLQA
+ AYARDENDEFVKATVIRAEGQADAAMEDGDTLIFMNFRADRAREITRAFVNADFDGFA
+ RKKVVNLNFVMLTEYAADIKTVVAYPPASLANTFGEWMAKNDKTQLRISETEKYAHVT
+ FFFNGGVEEPFAGEERILINSPKVATYDLQPEMSSAELTEKLVAAIESGKYDTIICNY
+ PNGDMVGHTGVMEAAIKAVEALDNCIDQVTKAVESVGGQLLITADHGNAEQMRDPATG
+ QAHTAHTNLPVPLIYVGEKNVKAIEGGKLSDIAPTMLSLMGMEIPQEMTGKPLFIVE"
+ misc_feature complement(3869678..3871192)
+ /locus_tag="SARI_03937"
+ /note="phosphoglyceromutase; Provisional; Region:
+ PRK05434"
+ /db_xref="CDD:235463"
+ misc_feature complement(3869681..3871192)
+ /locus_tag="SARI_03937"
+ /note="2,3-bisphosphoglycerate-independent
+ phosphoglycerate mutase; Region: pgm_bpd_ind; TIGR01307"
+ /db_xref="CDD:130374"
+ gene 3871461..3871892
+ /locus_tag="SARI_03938"
+ CDS 3871461..3871892
+ /locus_tag="SARI_03938"
+ /inference="protein motif:HMMPfam:IPR001763"
+ /inference="protein motif:HMMSmart:IPR001763"
+ /inference="similar to AA sequence:INSD:AAV79356.1"
+ /note="'KEGG: pha:PSHAa0367 2.2e-26 rhodanese sulfur
+ transferase K01010;
+ COG: COG0607 Rhodanese-related sulfurtransferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572874.1"
+ /db_xref="GI:161505762"
+ /db_xref="InterPro:IPR001763"
+ /translation="MQEIMQFVGRHPILSIAWIALLVAVLFTTFKGLTSKVKVITRGE
+ ATRLINKEDAVVVDLRQRDDFRKGHIAGATNLLPSEIKANNVGELEKHKDKPIIVVDG
+ SGMQCQESANALTKAGFEKVFVLKEGVAGWSGENLPLVRGK"
+ misc_feature 3871590..3871856
+ /locus_tag="SARI_03938"
+ /note="Rhodanese Homology Domain (RHOD); an alpha beta
+ fold domain found duplicated in the rhodanese protein. The
+ cysteine containing enzymatically active version of the
+ domain is also found in the Cdc25 class of protein
+ phosphatases and a variety of proteins...; Region: RHOD;
+ cd00158"
+ /db_xref="CDD:238089"
+ misc_feature 3871761..3871763
+ /locus_tag="SARI_03938"
+ /note="active site residue [active]"
+ /db_xref="CDD:238089"
+ gene 3871978..3872229
+ /locus_tag="SARI_03939"
+ CDS 3871978..3872229
+ /locus_tag="SARI_03939"
+ /inference="protein motif:FPrintScan:IPR002109"
+ /inference="protein motif:Gene3D:IPR012335"
+ /inference="protein motif:HMMPfam:IPR002109"
+ /inference="protein motif:HMMTigr:IPR011900"
+ /inference="protein motif:ScanRegExp:IPR011767"
+ /inference="protein motif:superfamily:IPR012336"
+ /inference="similar to AA sequence:INSD:CAD03292.1"
+ /note="'KEGG: eci:UTI89_C4152 3.3e-37 grxC; glutaredoxin 3
+ K03676;
+ COG: COG0695 Glutaredoxin and related proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="glutaredoxin 3"
+ /protein_id="YP_001572875.1"
+ /db_xref="GI:161505763"
+ /db_xref="InterPro:IPR002109"
+ /db_xref="InterPro:IPR011767"
+ /db_xref="InterPro:IPR011900"
+ /db_xref="InterPro:IPR012335"
+ /db_xref="InterPro:IPR012336"
+ /translation="MANIEIYTKATCPFCHRAKALLNSKGVSFQEIAIDGDAVKREEM
+ IKRSGRTTVPQIFIDAQHIGGCDDLYALDARGGLDPLLR"
+ misc_feature 3871984..3872205
+ /locus_tag="SARI_03939"
+ /note="Glutaredoxin (GRX) family, GRX bacterial class 1
+ and 3 (b_1_3)-like subfamily; composed of bacterial GRXs,
+ approximately 10 kDa in size, and proteins containing a
+ GRX or GRX-like domain. GRX is a glutathione (GSH)
+ dependent reductase, catalyzing the...; Region:
+ GRX_GRXb_1_3_like; cd03418"
+ /db_xref="CDD:239510"
+ misc_feature order(3872002..3872004,3872011..3872019,3872131..3872136)
+ /locus_tag="SARI_03939"
+ /note="GSH binding site [chemical binding]; other site"
+ /db_xref="CDD:239510"
+ misc_feature order(3872011..3872013,3872020..3872022)
+ /locus_tag="SARI_03939"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:239510"
+ gene 3872273..3872740
+ /locus_tag="SARI_03940"
+ CDS 3872273..3872740
+ /locus_tag="SARI_03940"
+ /inference="protein motif:BlastProDom:IPR003708"
+ /inference="protein motif:Gene3D:IPR003708"
+ /inference="protein motif:HMMPfam:IPR003708"
+ /inference="protein motif:HMMTigr:IPR003708"
+ /inference="similar to AA sequence:INSD:AAV79354.1"
+ /note="molecular chaperone that is required for the normal
+ export of envelope proteins out of the cell cytoplasm; in
+ Escherichia coli this proteins forms a homotetramer in the
+ cytoplasm and delivers proteins to be exported to SecA"
+ /codon_start=1
+ /transl_table=11
+ /product="preprotein translocase subunit SecB"
+ /protein_id="YP_001572876.1"
+ /db_xref="GI:161505764"
+ /db_xref="InterPro:IPR003708"
+ /translation="MSEQNNTEMAFQIQRIYTKDVSFEAPNAPHVFQKDWQPEVKLDL
+ DTASSQLADDVYEVVLRVTVTASLGEETAFLCEVQQAGIFSISGIEGTQMAHCLGAYC
+ PNILFPYARECITSLVSRGTFPQLNLAPVNFDALFMNYLQQQAGEGTEEHQDA"
+ misc_feature 3872303..3872689
+ /locus_tag="SARI_03940"
+ /note="Preprotein translocase subunit SecB. SecB is a
+ cytoplasmic component of the multisubunit membrane-bound
+ enzyme termed Sec protein translocase, which is the main
+ constituent of the General Secretory (type II) Pathway
+ involved in translocation of nascent...; Region:
+ Translocase_SecB; cd00557"
+ /db_xref="CDD:238312"
+ misc_feature order(3872330..3872332,3872342..3872344,3872495..3872497,
+ 3872501..3872503)
+ /locus_tag="SARI_03940"
+ /note="SecA binding site; other site"
+ /db_xref="CDD:238312"
+ misc_feature order(3872492..3872494,3872498..3872500,3872504..3872506,
+ 3872510..3872512)
+ /locus_tag="SARI_03940"
+ /note="Preprotein binding site; other site"
+ /db_xref="CDD:238312"
+ gene 3872740..3873759
+ /gene="gpsA"
+ /locus_tag="SARI_03941"
+ CDS 3872740..3873759
+ /gene="gpsA"
+ /locus_tag="SARI_03941"
+ /inference="protein motif:BlastProDom:IPR006109"
+ /inference="protein motif:FPrintScan:IPR006168"
+ /inference="protein motif:Gene3D:IPR006109"
+ /inference="protein motif:HMMPanther:IPR006168"
+ /inference="protein motif:HMMPfam:IPR006109"
+ /inference="protein motif:HMMPfam:IPR011128"
+ /inference="protein motif:ScanRegExp:IPR006168"
+ /inference="protein motif:superfamily:IPR008927"
+ /inference="similar to AA sequence:INSD:AAO71301.1"
+ /note="catalyzes the NAD(P)H-dependent reduction of
+ glycerol 3-phosphate to glycerone phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="NAD(P)H-dependent glycerol-3-phosphate
+ dehydrogenase"
+ /protein_id="YP_001572877.1"
+ /db_xref="GI:161505765"
+ /db_xref="InterPro:IPR006109"
+ /db_xref="InterPro:IPR006168"
+ /db_xref="InterPro:IPR008927"
+ /db_xref="InterPro:IPR011128"
+ /translation="MNQSNASMTVIGAGSYGTALAITLARNGHQVVLWGHDPKHIATL
+ EHDRCNVAFLPDVPFPDTLHLESDLATALAASRNILVVVPSHVFSDVLRQIKPLMRPD
+ ARLVWATKGLEAETGRLLQDVAREALGDQIPLAVISGPTFAKELAAGLPTAISLASTD
+ ETFADDLQQLLHCGKSFRVYINADFIGVQLGGAVKNVIAIGAGMSDGIGFGANARTAL
+ ITRGLTEMSRLGAALGADPATFMGMAGLGDLVLTCTDNQSRNRRFGMMLGQGMDVKGA
+ QDKIGQVVEGYRNTKEVRELAHRFGVEMPITEEIYQVLYCGKNAREAALTLLGRARKE
+ ELSRH"
+ misc_feature 3872755..3873729
+ /gene="gpsA"
+ /locus_tag="SARI_03941"
+ /note="NAD(P)H-dependent glycerol-3-phosphate
+ dehydrogenase; Validated; Region: gpsA; PRK00094"
+ /db_xref="CDD:234629"
+ misc_feature 3872758..3873231
+ /gene="gpsA"
+ /locus_tag="SARI_03941"
+ /note="NAD-dependent glycerol-3-phosphate dehydrogenase
+ N-terminus; Region: NAD_Gly3P_dh_N; pfam01210"
+ /db_xref="CDD:201664"
+ misc_feature 3873289..3873720
+ /gene="gpsA"
+ /locus_tag="SARI_03941"
+ /note="NAD-dependent glycerol-3-phosphate dehydrogenase
+ C-terminus; Region: NAD_Gly3P_dh_C; pfam07479"
+ /db_xref="CDD:116100"
+ unsure 3872766..3872783
+ /gene="gpsA"
+ /locus_tag="SARI_03941"
+ /note="Sequence derived from one plasmid subclone"
+ gene 3873837..3874658
+ /gene="cysE"
+ /locus_tag="SARI_03942"
+ CDS 3873837..3874658
+ /gene="cysE"
+ /locus_tag="SARI_03942"
+ /inference="protein motif:HMMPfam:IPR010493"
+ /inference="protein motif:HMMTigr:IPR005881"
+ /inference="protein motif:ScanRegExp:IPR001451"
+ /inference="protein motif:superfamily:IPR011004"
+ /inference="similar to AA sequence:INSD:AAL22558.1"
+ /note="catalyzes the O-acetylation of serine"
+ /codon_start=1
+ /transl_table=11
+ /product="serine acetyltransferase"
+ /protein_id="YP_001572878.1"
+ /db_xref="GI:161505766"
+ /db_xref="InterPro:IPR001451"
+ /db_xref="InterPro:IPR005881"
+ /db_xref="InterPro:IPR010493"
+ /db_xref="InterPro:IPR011004"
+ /translation="MPCEELEIVWKNIKAEARALADCEPMLASFYHATLLKHENLGSA
+ LSYMLANKLASPIMPAIAIREVVEEAYAADPEMIASAACDIQAVRTRDPAVDKYSTPL
+ LYLKGFHALQAYRIGHWLWNKGRRALAIFLQNQISVSFQVDIHPAAKIGRGIMLDHAT
+ GIVVGETAVIEDDVSILQSVTLGGTGKTSGDRHPKIREGVMIGAGAKILGNIEVGRGA
+ KIGAGSVVLQPVPPHTTAAGVPARIVGKPGSDKPSMDMDQHFNGIHHTFEYGDGI"
+ misc_feature 3873837..3874655
+ /gene="cysE"
+ /locus_tag="SARI_03942"
+ /note="serine acetyltransferase; Provisional; Region:
+ cysE; PRK11132"
+ /db_xref="CDD:182987"
+ misc_feature 3873861..3874175
+ /gene="cysE"
+ /locus_tag="SARI_03942"
+ /note="Serine acetyltransferase, N-terminal; Region:
+ SATase_N; pfam06426"
+ /db_xref="CDD:219022"
+ misc_feature 3874254..3874556
+ /gene="cysE"
+ /locus_tag="SARI_03942"
+ /note="Serine acetyltransferase (SAT): SAT catalyzes the
+ CoA-dependent acetylation of the side chain hydroxyl group
+ of L-serine to form O-acetylserine, as the first step of a
+ two-step biosynthetic pathway in bacteria and plants
+ leading to the formation of...; Region: LbH_SAT; cd03354"
+ /db_xref="CDD:100045"
+ misc_feature order(3874257..3874259,3874263..3874265,3874308..3874310,
+ 3874410..3874412,3874500..3874502,3874509..3874511,
+ 3874515..3874517)
+ /gene="cysE"
+ /locus_tag="SARI_03942"
+ /note="trimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:100045"
+ misc_feature order(3874305..3874310,3874365..3874370,3874386..3874391,
+ 3874410..3874415,3874446..3874448,3874491..3874493,
+ 3874497..3874502,3874509..3874511,3874515..3874517,
+ 3874539..3874541,3874554..3874556)
+ /gene="cysE"
+ /locus_tag="SARI_03942"
+ /note="active site"
+ /db_xref="CDD:100045"
+ misc_feature order(3874305..3874310,3874386..3874388,3874410..3874415)
+ /gene="cysE"
+ /locus_tag="SARI_03942"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:100045"
+ misc_feature order(3874365..3874370,3874386..3874391,3874446..3874448,
+ 3874491..3874493,3874497..3874502,3874509..3874511,
+ 3874515..3874517,3874539..3874541,3874554..3874556)
+ /gene="cysE"
+ /locus_tag="SARI_03942"
+ /note="CoA binding site [chemical binding]; other site"
+ /db_xref="CDD:100045"
+ gene complement(3874741..3876051)
+ /locus_tag="SARI_03943"
+ CDS complement(3874741..3876051)
+ /locus_tag="SARI_03943"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="similar to AA sequence:REFSEQ:YP_152663.1"
+ /note="'COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572879.1"
+ /db_xref="GI:161505767"
+ /db_xref="InterPro:IPR011701"
+ /translation="MNTIIKRTKVRHTILIFLFLATVFNYADRATLSVVAPIMSKELG
+ FDPEAMGLAFSSFGIAYVIMQLPGGWLLDRYGSRLVYGCALIGWSLVTMFQGTIYLYG
+ SPLIVLVILRLLMGAIEAPAFPANSRLSVQWFPNNERGFVTSVYQAAQYISLGIITPL
+ MTIILHNLSWHFVFYYIGAIGVMLGIFWLMKVKDPMHHPKVNQAEIDYIRSGGGEPSL
+ GCKKEPQKITFAQIKTVCVNRMMIGVYIGQFCVTSITWFFLTWFPTYLYQAKGMSILK
+ VGFVASIPAIAGFIGGLLGGVFSDWLLKRGYSLTVARKLPVICGMLLSCVIVIANYTS
+ SEFVVIAAMSLAFFAKGFGNLGWCVLSDTSPKEVLGIAGGVFNMCGNMASIVTPLVIG
+ VILANTQSFDFAILYVGSMGLIGLISYLFIVGPLDRITLTSSAA"
+ misc_feature complement(3874783..3876009)
+ /locus_tag="SARI_03943"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature complement(3874783..3875994)
+ /locus_tag="SARI_03943"
+ /note="D-galactonate transporter; Region: 2A0114;
+ TIGR00893"
+ /db_xref="CDD:233174"
+ misc_feature complement(order(3874900..3874902,3874909..3874914,
+ 3874921..3874926,3874933..3874938,3874969..3874971,
+ 3874978..3874983,3874993..3874995,3875002..3875007,
+ 3875014..3875016,3875176..3875178,3875188..3875190,
+ 3875197..3875199,3875209..3875211,3875221..3875223,
+ 3875263..3875265,3875272..3875277,3875284..3875289,
+ 3875296..3875298,3875590..3875592,3875608..3875613,
+ 3875620..3875625,3875659..3875661,3875668..3875673,
+ 3875680..3875685,3875692..3875697,3875845..3875850,
+ 3875854..3875859,3875869..3875871,3875878..3875883,
+ 3875890..3875892,3875941..3875946,3875950..3875958,
+ 3875965..3875967))
+ /locus_tag="SARI_03943"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene complement(3876125..3877342)
+ /locus_tag="SARI_03944"
+ CDS complement(3876125..3877342)
+ /locus_tag="SARI_03944"
+ /inference="protein motif:HMMPanther:IPR001354"
+ /inference="protein motif:HMMPfam:IPR013341"
+ /inference="protein motif:HMMPfam:IPR013342"
+ /inference="protein motif:ScanRegExp:IPR001354"
+ /inference="similar to AA sequence:REFSEQ:YP_218608.1"
+ /note="'KEGG: stm:STM3697 6.7e-213 putative mandelate
+ racemase / muconate lactonizing enzyme family K01781;
+ COG: COG4948 L-alanine-DL-glutamate epimerase and related
+ enzymes of enolase superfamily;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572880.1"
+ /db_xref="GI:161505768"
+ /db_xref="InterPro:IPR001354"
+ /db_xref="InterPro:IPR013341"
+ /db_xref="InterPro:IPR013342"
+ /translation="MIIRRKKMALSTNSDAVTYAKAANTRTAAETGDRIEWVKLSLAF
+ LPLATPVSDAKVLTGRQKPLTEVAIIIAEIRSRDGFEGVGFSYSKRAGGQGIYAHAKE
+ IADNLLGEDPNNIDKIYTKLLWAGASVGRSGMAVQAISPIDIALWDMKAKRAGLPLAK
+ LLGAHRDSVQCYNTSGGFLHTPLDQVLKNVVISRENGIGGIKLKVGQPNCAEDIRRLT
+ AVREALGDEFPLMVDANQQWDRETAIRMGRKMEQFNLIWIEEPLDAYDIEGHAQLAAA
+ LDTPIATGEMLTSFREHEQLILGNASDFVQPDAPRVGGISPFLKIMDLAAKHGRKLAP
+ HFAMEVHLHLSAAYPLEPWLEHFEWLNPLFNEQLELRDGRMWISDRHGLGFTLSEQAR
+ SWTQLTCEFGKRP"
+ misc_feature complement(3876167..3877243)
+ /locus_tag="SARI_03944"
+ /note="L-alanine-DL-glutamate epimerase and related
+ enzymes of enolase superfamily [Cell envelope biogenesis,
+ outer membrane / General function prediction only];
+ Region: COG4948"
+ /db_xref="CDD:227284"
+ misc_feature complement(3876185..3877243)
+ /locus_tag="SARI_03944"
+ /note="Mandelate racemase (MR)-like subfamily of the
+ enolase superfamily. Enzymes of this subgroup share three
+ conserved carboxylate ligands for the essential divalent
+ metal ion (usually Mg2+), two aspartates and a glutamate,
+ and conserved catalytic residues; Region: MR_like;
+ cd03316"
+ /db_xref="CDD:239432"
+ misc_feature complement(order(3876278..3876280,3876338..3876340,
+ 3876419..3876421,3876488..3876490,3876566..3876568,
+ 3876644..3876646,3876731..3876733,3876737..3876739))
+ /locus_tag="SARI_03944"
+ /note="active site pocket [active]"
+ /db_xref="CDD:239432"
+ gene complement(3877339..3877590)
+ /locus_tag="SARI_03946"
+ CDS complement(3877339..3877590)
+ /locus_tag="SARI_03946"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572881.1"
+ /db_xref="GI:161505770"
+ /translation="MPAAIASFASGKAVNTVAYQAQSLQNDSAIILYYAFPQIFLDRD
+ PFCNKSCFLYDICDQMFKSTSTFWILRSLNNKNDSAIIL"
+ gene 3877589..3878644
+ /locus_tag="SARI_03945"
+ CDS 3877589..3878644
+ /locus_tag="SARI_03945"
+ /inference="protein motif:HMMPfam:IPR000843"
+ /inference="protein motif:HMMPfam:IPR001761"
+ /inference="protein motif:HMMSmart:IPR000843"
+ /inference="protein motif:superfamily:IPR010982"
+ /inference="similar to AA sequence:INSD:"
+ /note="'KEGG: efa:EF1922 7.3e-06 transcriptional
+ regulator, LacI family/carbohydrate kinase, PfkB family
+ protein K00852;
+ COG: COG1609 Transcriptional regulators;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572882.1"
+ /db_xref="GI:161505769"
+ /db_xref="InterPro:IPR000843"
+ /db_xref="InterPro:IPR001761"
+ /db_xref="InterPro:IPR010982"
+ /translation="MMNNARINQPIFAGASDVKRTKSPRAPTLEDVARSAGLSPMTVS
+ RALNSPQLVRPKTVEKVMQAVRVTGYIPNALAGGLASRRSKLIAVVVPQINNNMFVDT
+ IQSLSDELARRGYHILLCVAGYTEQTEAELVATLLSRRPDGVVLTGIHHTIELKKVIL
+ NAAIPVVEIWDLTPTPLDMLVGFSHEKVGQATGEYLLSKGYRRPGLLWTADRRAAQRK
+ QGLCSVLQRHAIHAVPQVDVPLPASLSLGRSGLSQLFDEGTFDVIVCSSDTLAQGAMM
+ EAESRGLRIPHDLAVIGFGDLDFAASNRPSITTVSVDRRAIGQRAATLLADRIEQKPC
+ AEAIVDIGFHLIERESA"
+ misc_feature 3877667..3878638
+ /locus_tag="SARI_03945"
+ /note="Transcriptional regulators [Transcription]; Region:
+ PurR; COG1609"
+ /db_xref="CDD:224525"
+ misc_feature 3877679..3877831
+ /locus_tag="SARI_03945"
+ /note="Helix-turn-helix (HTH) DNA binding domain of the
+ LacI family of transcriptional regulators; Region:
+ HTH_LacI; cd01392"
+ /db_xref="CDD:143331"
+ misc_feature order(3877700..3877714,3877718..3877723,3877730..3877732,
+ 3877745..3877750,3877757..3877759,3877796..3877798,
+ 3877805..3877807,3877814..3877819,3877823..3877828)
+ /locus_tag="SARI_03945"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:143331"
+ misc_feature 3877796..3877825
+ /locus_tag="SARI_03945"
+ /note="domain linker motif; other site"
+ /db_xref="CDD:143331"
+ misc_feature 3877844..3878638
+ /locus_tag="SARI_03945"
+ /note="Ligand-binding domain of DNA transcription
+ repressor GntR specific for gluconate, a member of the
+ LacI-GalR family of bacterial transcription regulators;
+ Region: PBP1_GntR; cd01575"
+ /db_xref="CDD:107260"
+ misc_feature order(3877844..3877846,3877883..3877891,3877898..3877903,
+ 3877907..3877912,3877931..3877945,3877949..3877951,
+ 3877982..3877984,3877991..3877993,3878000..3878008,
+ 3878321..3878323,3878402..3878404,3878414..3878416,
+ 3878423..3878428)
+ /locus_tag="SARI_03945"
+ /note="putative dimerization interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:107260"
+ misc_feature order(3877880..3877885,3877892..3877894,3878027..3878029,
+ 3878096..3878098,3878135..3878137,3878237..3878239,
+ 3878312..3878314,3878471..3878473,3878522..3878524)
+ /locus_tag="SARI_03945"
+ /note="putative ligand binding site [chemical binding];
+ other site"
+ /db_xref="CDD:107260"
+ gene complement(3878712..3879185)
+ /locus_tag="SARI_03947"
+ CDS complement(3878712..3879185)
+ /locus_tag="SARI_03947"
+ /inference="protein motif:BlastProDom:IPR001537"
+ /inference="protein motif:HMMPfam:IPR001537"
+ /inference="protein motif:HMMTigr:IPR004440"
+ /inference="similar to AA sequence:REFSEQ:NP_462595.1"
+ /note="member of the SPOUT superfamily of RNA
+ methyltransferases; no methyltransferase activity observed
+ with certain tRNA substrates"
+ /codon_start=1
+ /transl_table=11
+ /product="putative tRNA/rRNA methyltransferase YibK"
+ /protein_id="YP_001572883.1"
+ /db_xref="GI:161505771"
+ /db_xref="InterPro:IPR001537"
+ /db_xref="InterPro:IPR004440"
+ /translation="MLNIVLFEPEIPPNTGNIIRLCANTGFRLHIIEPMGFTWDDKRL
+ RRAGLDYHEFAAVQRHHDYAAFVAAENPQRLFALTTKGTPAHSAVSYQNGDYLMFGPE
+ TRGLPASILDALSKEQKIRIPMMPNSRSMNLSNAVSVVVYEAWRQLGYPGAVLRS"
+ misc_feature complement(3878715..3879185)
+ /locus_tag="SARI_03947"
+ /note="putative rRNA methylase; Provisional; Region:
+ PRK10358"
+ /db_xref="CDD:182406"
+ gene complement(3879250..3880440)
+ /gene="lldD"
+ /locus_tag="SARI_03948"
+ CDS complement(3879250..3880440)
+ /gene="lldD"
+ /locus_tag="SARI_03948"
+ /inference="protein motif:HMMPfam:IPR000262"
+ /inference="protein motif:HMMPIR:IPR012133"
+ /inference="protein motif:ScanRegExp:IPR008259"
+ /inference="similar to AA sequence:INSD:AAL22553.1"
+ /note="flavin mononucleotide-dependent dehydrogenase;
+ functions in aerobic respiration and also has a role in
+ anaerobic nitrate respiration"
+ /codon_start=1
+ /transl_table=11
+ /product="L-lactate dehydrogenase"
+ /protein_id="YP_001572884.1"
+ /db_xref="GI:161505772"
+ /db_xref="InterPro:IPR000262"
+ /db_xref="InterPro:IPR008259"
+ /db_xref="InterPro:IPR012133"
+ /translation="MIISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQ
+ VALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIP
+ FTLSTVSVCPIEEVAPTLKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPT
+ PGARYRDAHSGMSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLE
+ DYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHG
+ GRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAYLY
+ ALATAGKAGVANLLDLIEKEMKVAMTLTGAKSISEISGDSLVQELGKSLPAALAPMSK
+ GDAT"
+ misc_feature complement(3879301..3880440)
+ /gene="lldD"
+ /locus_tag="SARI_03948"
+ /note="L-lactate dehydrogenase; Provisional; Region: lldD;
+ PRK11197"
+ /db_xref="CDD:183033"
+ misc_feature complement(3879325..3880422)
+ /gene="lldD"
+ /locus_tag="SARI_03948"
+ /note="Family of homologous FMN-dependent
+ alpha-hydroxyacid oxidizing enzymes. This family occurs in
+ both prokaryotes and eukaryotes. Members of this family
+ include flavocytochrome b2 (FCB2), glycolate oxidase
+ (GOX), lactate monooxygenase (LMO), mandelate...; Region:
+ alpha_hydroxyacid_oxid_FMN; cd02809"
+ /db_xref="CDD:239203"
+ misc_feature complement(order(3879451..3879453,3879607..3879609,
+ 3879616..3879618,3879688..3879690,3879949..3879951,
+ 3879970..3879972,3880054..3880056,3880123..3880125,
+ 3880369..3880371))
+ /gene="lldD"
+ /locus_tag="SARI_03948"
+ /note="active site"
+ /db_xref="CDD:239203"
+ misc_feature complement(order(3879607..3879609,3879616..3879618,
+ 3879949..3879951,3880054..3880056,3880369..3880371))
+ /gene="lldD"
+ /locus_tag="SARI_03948"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:239203"
+ misc_feature complement(order(3879451..3879453,3879607..3879609,
+ 3879616..3879618,3879688..3879690,3879970..3879972,
+ 3880054..3880056,3880123..3880125))
+ /gene="lldD"
+ /locus_tag="SARI_03948"
+ /note="FMN binding site [chemical binding]; other site"
+ /db_xref="CDD:239203"
+ misc_feature complement(order(3879616..3879618,3879949..3879951,
+ 3880054..3880056))
+ /gene="lldD"
+ /locus_tag="SARI_03948"
+ /note="putative catalytic residues [active]"
+ /db_xref="CDD:239203"
+ gene complement(3880437..3881204)
+ /locus_tag="SARI_03949"
+ CDS complement(3880437..3881204)
+ /locus_tag="SARI_03949"
+ /inference="protein motif:Gene3D:IPR000524"
+ /inference="protein motif:HMMPfam:IPR000524"
+ /inference="protein motif:HMMPfam:IPR011711"
+ /inference="protein motif:HMMSmart:IPR000524"
+ /inference="similar to AA sequence:REFSEQ:NP_462593.1"
+ /note="represses the lctPRD operon"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional repressor LldR"
+ /protein_id="YP_001572885.1"
+ /db_xref="GI:161505773"
+ /db_xref="InterPro:IPR000524"
+ /db_xref="InterPro:IPR011711"
+ /translation="MPKRLSDEIASRVRALIEEQNLEAGMKLPAERQLAIQLGVSRNS
+ LREALAKLVSEGVLVSRRGGGTFVRWQHETWSEQNIVQPLKTLMANDPDYSFDILEAR
+ HAIEASTAWHAAMRATAADKEKIRVCFDATLSEDPDLASQADVRFHLAIAEASHNVVL
+ LQTMRGFFDVLQSSVKQSRQRMYLVPPVFSKLTEQHQAVMDAILDGDADGARKAMMAH
+ LSFVHTTIKRFDEDQARQARITRLPGDHNEMTRENKS"
+ misc_feature complement(3880440..3881198)
+ /locus_tag="SARI_03949"
+ /note="DNA-binding transcriptional repressor LldR;
+ Provisional; Region: PRK10421"
+ /db_xref="CDD:236690"
+ misc_feature complement(3880998..3881192)
+ /locus_tag="SARI_03949"
+ /note="Winged helix-turn-helix (WHTH) DNA-binding domain
+ of the GntR family of transcriptional regulators; Region:
+ WHTH_GntR; cd07377"
+ /db_xref="CDD:153418"
+ misc_feature complement(order(3881007..3881018,3881022..3881027,
+ 3881055..3881057,3881064..3881069,3881073..3881087,
+ 3881109..3881114,3881118..3881120,3881187..3881189))
+ /locus_tag="SARI_03949"
+ /note="DNA-binding site [nucleotide binding]; DNA binding
+ site"
+ /db_xref="CDD:153418"
+ misc_feature complement(3880548..3880916)
+ /locus_tag="SARI_03949"
+ /note="FCD domain; Region: FCD; pfam07729"
+ /db_xref="CDD:219539"
+ gene complement(3881210..3882865)
+ /locus_tag="SARI_03950"
+ CDS complement(3881210..3882865)
+ /locus_tag="SARI_03950"
+ /inference="protein motif:HMMPfam:IPR003804"
+ /inference="protein motif:HMMTigr:IPR003804"
+ /inference="similar to AA sequence:REFSEQ:YP_218603.1"
+ /note="'COG: COG1620 L-lactate permease;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="L-lactate permease"
+ /protein_id="YP_001572886.1"
+ /db_xref="GI:161505774"
+ /db_xref="InterPro:IPR003804"
+ /translation="MNLWQQNYDPAGNIWLSSLVASLPILFFFFALIKLKLKGYVAAS
+ WTVVIALAVALLFYKMPVDHALASVVYGFFYGLWPIAWIIIAAVFVYKISVKTGQFDI
+ IRSSILSVTPDQRLQMLIVGFCFGAFLEGAAGFGAPVAITAALLVGLGFNPLYAAGLC
+ LIVNTAPVAFGAMGIPILVAGQVTGLDSFEIGQMVGRQLPFLTIIVLFWIMAIMDGWR
+ GVKETWPAVMVSGGSFAIAQYLSSNFIGPELPDIISSLVSLVCLTLFLKRWQPVRIFR
+ FGDMGASQVDQTLARTRYTKGQIVHAWSPFLFLTATVTLWSVPPFKALFAPGGALYDW
+ VINVPVPYLDKLVARMPPVVHEATAYAAVYKFDWFSATGTAILFAALLSIVWLKMKPS
+ AAIQTFGSTLKELALPIYSIGMVLAFAFISNYSGLSSTLALALAHTGGAFTFFSPFLG
+ WLGVFLTGSDTSSNALFASLQATAAQQIGVSDVLMVAANTTGGVTGKMISPQSIAIAC
+ AAVGLVGKESDLFRFTVKHSLIFTCMVGVITTLQAYVLTWMVP"
+ misc_feature complement(3881213..3882865)
+ /locus_tag="SARI_03950"
+ /note="L-lactate permease; Provisional; Region: PRK10420"
+ /db_xref="CDD:182445"
+ misc_feature complement(3881216..3882865)
+ /locus_tag="SARI_03950"
+ /note="glycolate transporter; Provisional; Region:
+ PRK09695"
+ /db_xref="CDD:182032"
+ gene complement(3883138..3883500)
+ /locus_tag="SARI_03951"
+ CDS complement(3883138..3883500)
+ /locus_tag="SARI_03951"
+ /inference="similar to AA sequence:INSD:AAL22548.1"
+ /note="'COG: NOG10267 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572887.1"
+ /db_xref="GI:161505775"
+ /translation="MKEVEKNEIKRLSDRLDAIRHQQAGLSLVESADKYAELEKEKET
+ LEVEINRLREVHSQKLSKEAQKLMNLPFRRAITKKEQADMGKLKKSVRGLIVVHPMTA
+ LGREMGLKEMTGFSKTEF"
+ misc_feature complement(3883141..3883494)
+ /locus_tag="SARI_03951"
+ /note="hypothetical protein; Provisional; Region:
+ PRK11020"
+ /db_xref="CDD:182904"
+ gene 3883791..3884000
+ /locus_tag="SARI_03952"
+ CDS 3883791..3884000
+ /locus_tag="SARI_03952"
+ /inference="similar to AA sequence:INSD:AAV79342.1"
+ /note="'KEGG: eca:ECA2363 7.0e-05 DNA polymerase III,
+ theta subunit K00961;
+ COG: NOG18544 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572888.1"
+ /db_xref="GI:161505776"
+ /translation="MAKIGESVPLLIDKAVDFMASSQAFREYLNKTPPYNYVPSEVPP
+ ESAPIFLQRLEYYRRLYRPKEEERG"
+ misc_feature 3883794..>3883925
+ /locus_tag="SARI_03952"
+ /note="Alpha amylase catalytic domain family; Region:
+ AmyAc_family; cl07893"
+ /db_xref="CDD:244824"
+ gene complement(3884010..3884600)
+ /gene="mtlR"
+ /locus_tag="SARI_03953"
+ CDS complement(3884010..3884600)
+ /gene="mtlR"
+ /locus_tag="SARI_03953"
+ /inference="protein motif:HMMPfam:IPR007761"
+ /inference="similar to AA sequence:INSD:AAO71313.1"
+ /note="Acts as a repressor of the mtlAD operon"
+ /codon_start=1
+ /transl_table=11
+ /product="mannitol repressor protein"
+ /protein_id="YP_001572889.1"
+ /db_xref="GI:161505777"
+ /db_xref="InterPro:IPR007761"
+ /translation="MMQNPAQVSLRPDNRLSDMQAIMEQTQAFENRVLERLNAGKTVR
+ SFLITAVELLTEAVNILVLQVFRKDDYAVKYAVEPLLDGDGPLGDLSVRLKLIYGLGV
+ LSRTEYEDAELLMALREELNHDGNEYAFTDDEILGPFGELHCVMALPPPPHFDTSDAA
+ LYAMQIQRYQQAVRSTMVLSLTELISKISLKKAFQK"
+ misc_feature complement(3884016..3884537)
+ /gene="mtlR"
+ /locus_tag="SARI_03953"
+ /note="Transcriptional regulator [Transcription]; Region:
+ MtlR; COG3722"
+ /db_xref="CDD:226245"
+ misc_feature complement(3884019..3884522)
+ /gene="mtlR"
+ /locus_tag="SARI_03953"
+ /note="mannitol repressor protein; Provisional; Region:
+ mtlR; PRK11001"
+ /db_xref="CDD:236817"
+ gene complement(3884597..3885760)
+ /locus_tag="SARI_03954"
+ CDS complement(3884597..3885760)
+ /locus_tag="SARI_03954"
+ /inference="protein motif:HMMPfam:IPR013118"
+ /inference="protein motif:HMMPfam:IPR013131"
+ /inference="protein motif:ScanRegExp:IPR000669"
+ /inference="protein motif:superfamily:IPR008927"
+ /inference="similar to AA sequence:REFSEQ:YP_218597.1"
+ /note="'KEGG: sec:SC3610 8.6e-197 mtlD;
+ mannitol-1-phosphate dehydrogenase K00009;
+ COG: COG0246 Mannitol-1-phosphate/altronate
+ dehydrogenases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="mannitol-1-phosphate 5-dehydrogenase"
+ /protein_id="YP_001572890.1"
+ /db_xref="GI:161505778"
+ /db_xref="InterPro:IPR000669"
+ /db_xref="InterPro:IPR008927"
+ /db_xref="InterPro:IPR013118"
+ /db_xref="InterPro:IPR013131"
+ /translation="MKVNTMKALHFGAGNIGRGFIGKLLADAGIQLTFADVNQVVLDA
+ LNARHSYQVHVVGENEQVDTVSGVNAVSSIGDEVVELIASVDLVTTAVGPVVLERIAP
+ AIAKGLAKRKAQGVDAPLNIIACENMVRGTTQLKGHVMNALADGDKAWVEQHVGFVDS
+ AVDRIVPPSASATHDPLEVTVETFSEWIVDKTQFKGALPTIPGMELTDNLMAFVERKL
+ FTLNTGHAITAYLGKLAGHQTIRDAILDESIRAVVKGAMEESGAVLIKRYGFDADKHA
+ AYIQKILGRFENPYLKDDVERVGRQPLRKLSAGDRLIKPLLGTLEYGLPHVNLVKGIA
+ AAMHFRSDEDPQAQELADMITEKGPLAALAQISGLDANSDVVAEVVNAYNATK"
+ misc_feature complement(3884600..3885745)
+ /locus_tag="SARI_03954"
+ /note="mannitol-1-phosphate 5-dehydrogenase; Provisional;
+ Region: PRK02318"
+ /db_xref="CDD:235031"
+ misc_feature complement(3885377..3885745)
+ /locus_tag="SARI_03954"
+ /note="Mannitol dehydrogenase Rossmann domain; Region:
+ Mannitol_dh; pfam01232"
+ /db_xref="CDD:144722"
+ misc_feature complement(3884624..3885304)
+ /locus_tag="SARI_03954"
+ /note="Mannitol dehydrogenase C-terminal domain; Region:
+ Mannitol_dh_C; pfam08125"
+ /db_xref="CDD:149275"
+ gene complement(3885875..3887788)
+ /locus_tag="SARI_03955"
+ CDS complement(3885875..3887788)
+ /locus_tag="SARI_03955"
+ /inference="protein motif:BlastProDom:IPR002178"
+ /inference="protein motif:Gene3D:IPR002178"
+ /inference="protein motif:HMMPfam:IPR002178"
+ /inference="protein motif:HMMPfam:IPR003352"
+ /inference="protein motif:HMMPfam:IPR003501"
+ /inference="protein motif:HMMTigr:IPR004718"
+ /inference="protein motif:ScanRegExp:IPR002178"
+ /note="'KEGG: stm:STM3685 0. mtlA; PTS family,
+ mannitol-specific enzyme IIABC components
+ K02798:K02799:K02800;
+ COG: COG4668 Mannitol/fructose-specific phosphotransferase
+ system, IIA domain;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572891.1"
+ /db_xref="GI:161505779"
+ /db_xref="InterPro:IPR002178"
+ /db_xref="InterPro:IPR003352"
+ /db_xref="InterPro:IPR003501"
+ /db_xref="InterPro:IPR004718"
+ /translation="MSSDIKIKVQSFGRFLSNMVMPNIGAFIAWGIITALFIPTGWLP
+ NETLAKLVGPMITYLLPLLIGYTGGRLVGGERGGVVGAITTMGVIVGADMPMFLGSMI
+ AGPLGGYCIKKFDSWVDGKIKSGFEMLVNNFSAGIIGMILAMLAFLGIGPAVEVLSKI
+ LAAGVNFMVAHDMLPLASIFVEPAKILFLNNAINHGIFSPLGIQQSHEMGKSIFFLIE
+ ANPGPGMGVLLAYMFFGRGSAKQSAGGAAIIHFLGGIHEIYFPYVLMNPRLILAVILG
+ GMTGVFTLTILNGGLVSPASPGSILAVLAMTPKGAYFANITAIVAAMAVSFVVSAILL
+ KTSKVKEEDDIEAATRRMHDMKAQSKGASPLAAGDVTNDLSHVRKIIVACDAGMGSSA
+ MGAGVLRKKVQDAGLSQISVTNSAINNLPPDVDLVITHRDLTERAMRQVPQAQHISLT
+ NFLDSGLYTSLTERLVAAQRHNTNEEKVRDHLKDSFEEGDNNLFKLGAENIFLGRKAA
+ TKEEAIRFAGEQLVKGGYVQPEYVDAMLEREKLTPTYLGESIAVPHGTVEAKDRVLKT
+ GVVFCQYPEGVRFGEEEDDIARLVIGIAARNNEHIQVITSLTNALDDESVIERLAHTT
+ SVDEVLELLAGRK"
+ misc_feature complement(3885878..3887788)
+ /locus_tag="SARI_03955"
+ /note="PTS system mannitol-specific transporter subunit
+ IICBA; Provisional; Region: PRK15083"
+ /db_xref="CDD:237905"
+ misc_feature complement(3886754..3887767)
+ /locus_tag="SARI_03955"
+ /note="PTS system, mannitol-specific IIC component;
+ Region: mtlA; TIGR00851"
+ /db_xref="CDD:129930"
+ misc_feature complement(3886394..3886657)
+ /locus_tag="SARI_03955"
+ /note="PTS_IIB_mannitol: subunit IIB of enzyme II (EII) of
+ the mannitol-specific phosphoenolpyruvate:carbohydrate
+ phosphotransferase system (PTS). In this system, EII is a
+ mannitol-specific permease with two cytoplasmic domains
+ (IIA and IIB) and a transmembrane...; Region:
+ PTS_IIB_mannitol; cd05567"
+ /db_xref="CDD:99909"
+ misc_feature complement(3886616..3886642)
+ /locus_tag="SARI_03955"
+ /note="active site"
+ /db_xref="CDD:99909"
+ misc_feature complement(order(3886616..3886624,3886628..3886639))
+ /locus_tag="SARI_03955"
+ /note="P-loop; other site"
+ /db_xref="CDD:99909"
+ misc_feature complement(3886637..3886639)
+ /locus_tag="SARI_03955"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:99909"
+ misc_feature complement(3885890..3886297)
+ /locus_tag="SARI_03955"
+ /note="PTS_IIA, PTS system, fructose/mannitol specific IIA
+ subunit. The bacterial phosphoenolpyruvate: sugar
+ phosphotransferase system (PTS) is a multi-protein system
+ involved in the regulation of a variety of metabolic and
+ transcriptional processes. This...; Region: PTS_IIA_fru;
+ cd00211"
+ /db_xref="CDD:238129"
+ misc_feature complement(order(3886127..3886129,3886175..3886177))
+ /locus_tag="SARI_03955"
+ /note="active site"
+ /db_xref="CDD:238129"
+ misc_feature complement(3886127..3886129)
+ /locus_tag="SARI_03955"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238129"
+ gene 3888599..3890272
+ /locus_tag="SARI_03956"
+ CDS 3888599..3890272
+ /locus_tag="SARI_03956"
+ /inference="protein motif:HMMPfam:IPR010262"
+ /inference="similar to AA sequence:INSD:"
+ /note="'KEGG: lpl:lp_1381 2.3e-29 astA; arylsulfate
+ sulfotransferase K01023;
+ COG: NOG14107 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572892.1"
+ /db_xref="GI:161505780"
+ /db_xref="InterPro:IPR010262"
+ /translation="MSGNTTRTILRNLKLEHDSAWQQIHMKYNKFAPTIDTPLIITDP
+ YRCNMLSALLCFRTESPAQISITIGIGDTQTDIAFDFSKQGQWHLDHFIPVAGLYPDS
+ ANKVDVTVSYEDGTVETKNYTIQTQALPDVPVLMPALGKIENFEYTEKFDLMAEGLTF
+ MAPQSAYIFGVDSKRNVRWILQGDYVNSEWSDIERLANGNFLISFGFYELREVDILGR
+ CLKQTILTSRMHHDWFELDNGQLLITTEDDSHPDNFVMDVSEVINYPESSDTVYQLRM
+ REVLDTTRVAIPNVNAQSDNDDKDWFHNNRSVYDVRNQSFIVSGRHQDAIISFIQTAA
+ ELDHTLELDDINWIMGPHDNWVEAYQSKLLTPIDENGNIIDDTTANLEFWNWGQHSVS
+ IPADQPEDDNLADYIIFNNGNYRSYDQTLAVPASSNYSQCSRYRINRSTMTIQKVWTF
+ GQELGSGHYGSFVGSVRDHDTTYIVNAGGICLNGEGINVGTHYGDPDNELILNDIYPH
+ ACVYEVLKETKEIIWGMEFSWELTPYFVYFNFKATRAPMYPENINIYSA"
+ misc_feature 3888713..3890038
+ /locus_tag="SARI_03956"
+ /note="Arylsulfotransferase (ASST); Region:
+ Arylsulfotrans; pfam05935"
+ /db_xref="CDD:218815"
+ gene complement(3890308..3890649)
+ /locus_tag="SARI_03957"
+ CDS complement(3890308..3890649)
+ /locus_tag="SARI_03957"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572893.1"
+ /db_xref="GI:161505781"
+ /translation="MDEKMGNMTSVSTSPRIPLTKLDLPGKAAMPIVATTMFTLNIIR
+ GVYAANGDSPVMVVTLSIVSVLQLIAGITCYYEGYKAMFSHMAPYMRFMAAQIQRQQP
+ PAAIMEFPSTL"
+ misc_feature complement(3890371..>3890421)
+ /locus_tag="SARI_03957"
+ /note="anaerobic sulfatase-maturating enzyme; Region:
+ sulfatase_rSAM; TIGR03942"
+ /db_xref="CDD:188457"
+ gene 3890926..3892464
+ /locus_tag="SARI_03958"
+ CDS 3890926..3892464
+ /locus_tag="SARI_03958"
+ /inference="protein motif:HMMPfam:IPR001996"
+ /inference="protein motif:HMMPfam:IPR003352"
+ /inference="protein motif:HMMTigr:IPR011535"
+ /inference="similar to AA sequence:REFSEQ:YP_001177946.1"
+ /note="'KEGG: sav:SAV0242 6.4e-169 PTS enzyme
+ K02790:K02791;
+ COG: COG1264 Phosphotransferase system IIB components;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572894.1"
+ /db_xref="GI:161505782"
+ /db_xref="InterPro:IPR001996"
+ /db_xref="InterPro:IPR003352"
+ /db_xref="InterPro:IPR011535"
+ /translation="MSRLFSGAQNLGKSFMLPIAILPAAGLLLGFGGVFTNPITVSTY
+ PFLNNEIVQAIFTIMRLCGSVVFDNLSLLFSVGIAVGLARSDKGTAGLAAVLCFLMMN
+ KAINALLLLTGTLATENLAAVGQASVLGITTLQTGVLGGVMCGLLTSWVHGRYGKTQL
+ PNMLAFFSGSRFVPIMTSFFAIFLGIVLFWVWPHIQAGISYLGILVESTGYLGTLIYG
+ IILKCLIPLGLHHLFYMPFWLTSVGGEAVVNGHVVEGTQKIFFAQLADPSVTQYYIGV
+ SRFMAGRFADFMFGLPGAALAIYHCAKPENKKKVASLMLSAALTAFVTGITEPLEFAF
+ MFCAPLLYVVHIVLTGFAFMFSHILEITVGQTFSGGLVDFLLFGVLQGNAKTNWIMIF
+ PLGVVMFCVYYFTFRFLIQWRQLKTPGREDESEDIVTADVGSNTRAAGIVEALGGRNN
+ IADVDCCATRLRITVNTPEKVNLERFKSLGSKGAFIRGQGVQVVYGPHVTLIKNEVEE
+ FIGS"
+ misc_feature 3890932..3892455
+ /locus_tag="SARI_03958"
+ /note="PTS system, glucose-specific IIBC component;
+ Region: PTS-II-BC-glcB; TIGR02002"
+ /db_xref="CDD:233681"
+ misc_feature 3890935..3892206
+ /locus_tag="SARI_03958"
+ /note="Phosphotransferase system IIC components,
+ glucose/maltose/N-acetylglucosamine-specific [Carbohydrate
+ transport and metabolism]; Region: PtsG; COG1263"
+ /db_xref="CDD:224183"
+ misc_feature 3892228..3892449
+ /locus_tag="SARI_03958"
+ /note="PTS_IIB, PTS system, glucose/sucrose specific IIB
+ subunit. The bacterial phosphoenolpyruvate: sugar
+ phosphotransferase system (PTS) is a multi-protein system
+ involved in the regulation of a variety of metabolic and
+ transcriptional processes. This family...; Region:
+ PTS_IIB_glc; cd00212"
+ /db_xref="CDD:238130"
+ misc_feature 3892291..3892311
+ /locus_tag="SARI_03958"
+ /note="active site turn [active]"
+ /db_xref="CDD:238130"
+ misc_feature 3892294..3892296
+ /locus_tag="SARI_03958"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238130"
+ gene 3892478..3894205
+ /locus_tag="SARI_03959"
+ CDS 3892478..3894205
+ /locus_tag="SARI_03959"
+ /inference="protein motif:HMMPfam:IPR000917"
+ /inference="similar to AA sequence:INSD:AAL19821.1"
+ /note="'KEGG: reh:H16_B1528 9.4e-24 sulfatase;
+ COG: COG3119 Arylsulfatase A and related enzymes;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572895.1"
+ /db_xref="GI:161505783"
+ /db_xref="InterPro:IPR000917"
+ /translation="MKAVMLMFDTLTRNHLAPYGGDAITPNFTRLAQESAQFDNFYVG
+ SMPCMPARRELHTGRYNFLHRSWGPLEPFDFSAMQALRQHGVHTHMVTDHKHYWRDGG
+ ATYHTRYSTFEFIRGQEGDCWKGQVEKPVIRWQGNEDEETLRRRAGRMTQDLINRAAM
+ PTQQEHFTHRTISAGMEFLQNNCEQDNWFLQIECFDPHEPFFVPEKYLTQYGCKPEEF
+ DGWVPYYCGAPGGKDDEKVRKFYQALITMCDDYLGQVMDKLKALNLWDDTLFIVCTDH
+ GFLLGEHHWWGKNIMPVYNEIANTPFFIRDPRCKIRGVRRQALAQTVDIPATLMEYFE
+ IPRPATMTGQPLRSAIERDEPVRDYALFGYFGGHINITDGEYVYMRCPREQHKANLYE
+ YTLMPTRIDSPFKIDELKDIRIHPGFDFTQGTQVMQIPATFGYLNPWRFGDKLFDLKN
+ DPEQCHPLNDEALSHRYASAMIPLMQQHDAPPELYTRFELDPLSPERDADFACRQKQK
+ CNGYECAHPGVAEALSFLIRNSAADAFTLRHDKPVEEADIYKLIDTLFHGDKHRAMVY
+ QTRLLLRTA"
+ misc_feature 3892478..3893635
+ /locus_tag="SARI_03959"
+ /note="Arylsulfatase A and related enzymes [Inorganic ion
+ transport and metabolism]; Region: AslA; COG3119"
+ /db_xref="CDD:225661"
+ misc_feature 3892487..3893551
+ /locus_tag="SARI_03959"
+ /note="Sulfatase; Region: Sulfatase; cl17466"
+ /db_xref="CDD:248020"
+ gene 3894215..3895078
+ /locus_tag="SARI_03960"
+ CDS 3894215..3895078
+ /locus_tag="SARI_03960"
+ /inference="protein motif:HMMPfam:IPR008183"
+ /inference="protein motif:superfamily:IPR011013"
+ /inference="similar to AA sequence:REFSEQ:YP_193868.1"
+ /note="'KEGG: ldb:Ldb1268 6.5e-25 putative mutarotase
+ K01785;
+ COG: COG2017 Galactose mutarotase and related enzymes;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572896.1"
+ /db_xref="GI:161505784"
+ /db_xref="InterPro:IPR008183"
+ /db_xref="InterPro:IPR011013"
+ /translation="MEWYLENARFRMMVRDIGAELTLLWDKHRQRNWIWQPQPGVWNN
+ SATQLFPVVGQLIHGGLWQDERFFPLSAHGFLRQQTFRCLAHDATHLRLEVSDNNDTR
+ EVWPFKWRIQLDWSLEDEGLNVTWKVLNEDHQAWGYSLGWHPGFALPVASEPGWQVRF
+ NHPCQGPFPTVNRTLEIPRTPATSTLFQLQPQTFVSGAVYLVPGEENQWAVCSPLGHE
+ QIVFSASSPWLALWGVPGADLLCVEALSGTTDDPHFDGQVAHKRGIQWLRSGEQHRHW
+ ISVRFPADTEQ"
+ misc_feature 3894221..3895057
+ /locus_tag="SARI_03960"
+ /note="Aldose 1-epimerase, similar to Lactococcus lactis
+ lacX; Region: Aldose_epim_lacX; cd09024"
+ /db_xref="CDD:185701"
+ misc_feature order(3894377..3894379,3894431..3894433,3894641..3894643,
+ 3894647..3894649,3894806..3894808,3894908..3894910,
+ 3894941..3894943)
+ /locus_tag="SARI_03960"
+ /note="active site"
+ /db_xref="CDD:185701"
+ misc_feature order(3894641..3894643,3894941..3894943)
+ /locus_tag="SARI_03960"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:185701"
+ gene 3895124..3896005
+ /locus_tag="SARI_03961"
+ CDS 3895124..3896005
+ /locus_tag="SARI_03961"
+ /inference="protein motif:HMMPfam:IPR000281"
+ /inference="protein motif:HMMPfam:IPR001347"
+ /inference="similar to AA sequence:INSD:EDJ92390.1"
+ /note="'KEGG: bam:Bamb_0825 1.1e-20 glucokinase K00845;
+ COG: COG1737 Transcriptional regulators;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572897.1"
+ /db_xref="GI:161505785"
+ /db_xref="InterPro:IPR000281"
+ /db_xref="InterPro:IPR001347"
+ /translation="MSVNKENVRVYLANILGSLGETDAKIAGYILQQPGLVVQFPVKK
+ LAQEIGVSEATIVRFCKKVGYGGLLNLKADLKRELLAENDLSLPSSPDIFLDDSRNDV
+ AQKIALTIETSARETIGLLDMKIVKPVVERFLSARRVMFVGFGASGLAALEARDKMNR
+ LGIDSDAFTDRFTMTLKLANLKRDDLVVAFSHSGETPEVVNAFRLAQKKGAYTLAITH
+ SPHSPLNELANTFWLTSGEAGPMQGDSISTRISQLFIIEFLCTEITRHNLRDSGMTGL
+ SIKEILIKERIKRESSG"
+ misc_feature 3895139..3895936
+ /locus_tag="SARI_03961"
+ /note="Transcriptional regulators [Transcription]; Region:
+ RpiR; COG1737"
+ /db_xref="CDD:224651"
+ misc_feature 3895154..3895360
+ /locus_tag="SARI_03961"
+ /note="Helix-turn-helix domain, rpiR family; Region:
+ HTH_6; pfam01418"
+ /db_xref="CDD:201784"
+ misc_feature 3895508..3895909
+ /locus_tag="SARI_03961"
+ /note="RpiR-like protein. RpiR contains a SIS (Sugar
+ ISomerase) domain, which is found in many phosphosugar
+ isomerases and phosphosugar binding proteins. In E. coli,
+ rpiR negatively regulates the expression of rpiB gene.
+ Both rpiB and rpiA are ribose phosphate...; Region:
+ SIS_RpiR; cd05013"
+ /db_xref="CDD:240144"
+ misc_feature order(3895562..3895564,3895694..3895696)
+ /locus_tag="SARI_03961"
+ /note="putative active site [active]"
+ /db_xref="CDD:240144"
+ gene 3895989..3896369
+ /locus_tag="SARI_03962"
+ CDS 3895989..3896369
+ /locus_tag="SARI_03962"
+ /inference="protein motif:HMMPfam:IPR003807"
+ /inference="similar to AA sequence:REFSEQ:YP_051091.1"
+ /note="'COG: COG2149 Predicted membrane protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572898.1"
+ /db_xref="GI:161505786"
+ /db_xref="InterPro:IPR003807"
+ /translation="MSLQDNDFAPKPAGKWWLAGKKPDYRFTLANERTFLAWIRTALA
+ LMAGAVGIEQFSPQLSSPFLRHSLALCLVVAGAVLGGQAWRRWRHNEYAMRLDQQLYY
+ SRFICALSLFLIIMALLLGVMLWG"
+ misc_feature 3896040..>3896300
+ /locus_tag="SARI_03962"
+ /note="Domain of unknown function (DUF202); Region:
+ DUF202; cl09954"
+ /db_xref="CDD:245218"
+ gene 3896360..3896653
+ /locus_tag="SARI_03963"
+ CDS 3896360..3896653
+ /locus_tag="SARI_03963"
+ /note="'KEGG: sil:SPO2890 0.0075 glucans biosynthesis
+ glucosyltransferase H, putative K03669;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572899.1"
+ /db_xref="GI:161505787"
+ /translation="MGLEVQTIRDAGLQPERTELSWRRTAFSMLIPAFLTLRSWFHYG
+ EWPYAVAGLLLISCALLVLLDQRYKNQLYVSFSVVASSLVLGLLFIFRLFIGV"
+ misc_feature 3896393..>3896512
+ /locus_tag="SARI_03963"
+ /note="Domain of unknown function (DUF202); Region:
+ DUF202; pfam02656"
+ /db_xref="CDD:217167"
+ gene 3896731..3897339
+ /locus_tag="SARI_03964"
+ CDS 3896731..3897339
+ /locus_tag="SARI_03964"
+ /inference="protein motif:Gene3D:IPR012335"
+ /inference="protein motif:HMMPfam:IPR004045"
+ /inference="protein motif:HMMPfam:IPR004046"
+ /inference="protein motif:superfamily:IPR010987"
+ /inference="protein motif:superfamily:IPR012336"
+ /inference="similar to AA sequence:INSD:AAO71316.1"
+ /note="'KEGG: eci:UTI89_C4134 8.9e-92 yibF; putative
+ S-transferase K00799;
+ COG: COG0625 GlutaTHIone S-transferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative glutathione S-transferase"
+ /protein_id="YP_001572900.1"
+ /db_xref="GI:161505788"
+ /db_xref="InterPro:IPR004045"
+ /db_xref="InterPro:IPR004046"
+ /db_xref="InterPro:IPR010987"
+ /db_xref="InterPro:IPR012335"
+ /db_xref="InterPro:IPR012336"
+ /translation="MKLIGSYTSPFVRKISILLLEKGITFEFVNELPYEADNGVAQYN
+ PLGKVPTLVTEKGECWFDSPIIAEYIELQGIAPAMLPADPLASLRVRQLEALADGIMD
+ AALVSVREQARPVAQQSETELLRQREKINRSLDMLESYLTDGTLKTDTVNLATIAIAC
+ AVGYLNFRRVAPGWCVGRHHLVKLVETLFQRESFARTEAPKA"
+ misc_feature 3896731..3897336
+ /locus_tag="SARI_03964"
+ /note="putative glutathione S-transferase; Provisional;
+ Region: PRK10357"
+ /db_xref="CDD:182405"
+ misc_feature 3896731..3896943
+ /locus_tag="SARI_03964"
+ /note="GST_N family, unknown subfamily 3; composed of
+ uncharacterized bacterial proteins with similarity to
+ GSTs. GSTs are cytosolic dimeric proteins involved in
+ cellular detoxification by catalyzing the conjugation of
+ glutathione (GSH) with a wide range of...; Region:
+ GST_N_3; cd03049"
+ /db_xref="CDD:239347"
+ misc_feature order(3896761..3896763,3896767..3896772,3896776..3896781,
+ 3896788..3896793,3896920..3896922,3896929..3896934)
+ /locus_tag="SARI_03964"
+ /note="putative C-terminal domain interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:239347"
+ misc_feature order(3896761..3896763,3896872..3896880,3896914..3896919)
+ /locus_tag="SARI_03964"
+ /note="putative GSH binding site (G-site) [chemical
+ binding]; other site"
+ /db_xref="CDD:239347"
+ misc_feature order(3896872..3896874,3896911..3896916,3896920..3896925,
+ 3896932..3896934)
+ /locus_tag="SARI_03964"
+ /note="putative dimer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:239347"
+ misc_feature 3896998..3897327
+ /locus_tag="SARI_03964"
+ /note="C-terminal, alpha helical domain of an unknown
+ subfamily 6 of Glutathione S-transferases; Region:
+ GST_C_6; cd03205"
+ /db_xref="CDD:198314"
+ misc_feature order(3897001..3897006,3897010..3897018,3897022..3897027,
+ 3897034..3897036,3897055..3897060,3897070..3897072,
+ 3897076..3897087,3897094..3897096,3897103..3897105,
+ 3897115..3897117,3897124..3897129,3897136..3897138)
+ /locus_tag="SARI_03964"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:198314"
+ misc_feature order(3897010..3897012,3897022..3897024,3897031..3897036,
+ 3897055..3897057,3897187..3897189,3897196..3897201,
+ 3897208..3897210,3897220..3897222,3897295..3897297,
+ 3897307..3897312,3897316..3897327)
+ /locus_tag="SARI_03964"
+ /note="N-terminal domain interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:198314"
+ misc_feature order(3897022..3897024,3897034..3897039,3897046..3897051,
+ 3897211..3897213,3897220..3897222)
+ /locus_tag="SARI_03964"
+ /note="putative substrate binding pocket (H-site)
+ [chemical binding]; other site"
+ /db_xref="CDD:198314"
+ gene 3897438..3898829
+ /locus_tag="SARI_03965"
+ CDS 3897438..3898829
+ /locus_tag="SARI_03965"
+ /inference="protein motif:HMMPfam:IPR004534"
+ /inference="protein motif:HMMTigr:IPR004534"
+ /inference="similar to AA sequence:INSD:AAO71317.1"
+ /note="catalyzes the formation of
+ selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and
+ L-selenophosphate in selenoprotein biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="selenocysteine synthase"
+ /protein_id="YP_001572901.1"
+ /db_xref="GI:161505789"
+ /db_xref="InterPro:IPR004534"
+ /translation="MTSETRTLYSQLPAIDRLLHDSAFLSLCDQYGHTQVVDLLRRML
+ DDARDVIRNTQTLPDWCADWAQEANLRLEKAAQSALRPVINLTGTVLHTNLGRAWQAQ
+ EAIDAVMQAMRAPVTLEYDLDGAGRGHRDRALATLLCRITGAEDACIVNNNAAAVLLM
+ LAATASGKEVVVSRGELVEIGGAFRIPDVMRQAGCTLHEVGTTNRTHAKDYRQAVNEN
+ TGLLMKVHTSNYSIEGFTKAVEEAELAEIGRELDIPVVADLGSGSLVDLSQYGLPKEP
+ MPQQLIAAGVSLVSFSGDKLLGGPQAGIIVGKKAMIAQLQSHPLKRALRADKMTLAAL
+ EATLRLYLHPEALSEKLPTLRLLTRSEASIREQAQRLQARLVARYGDEFTLEVKPCLS
+ QIGSGSLPVDRLPSAAMTFTPHDGRGSRLEALAAHWRTLPVPIIGRIYDGRLWLDMRC
+ LEDESRFMEMMLK"
+ misc_feature 3897444..3898826
+ /locus_tag="SARI_03965"
+ /note="selenocysteine synthase; Provisional; Region:
+ PRK04311"
+ /db_xref="CDD:235278"
+ misc_feature 3897462..>3897539
+ /locus_tag="SARI_03965"
+ /note="Selenocysteine synthase N terminal; Region:
+ Se-cys_synth_N; pfam12390"
+ /db_xref="CDD:204898"
+ misc_feature 3897603..3898826
+ /locus_tag="SARI_03965"
+ /note="Selenocysteine synthase [seryl-tRNASer selenium
+ transferase] [Amino acid transport and metabolism];
+ Region: SelA; COG1921"
+ /db_xref="CDD:224832"
+ misc_feature order(3898113..3898115,3898233..3898235,3898242..3898244,
+ 3898311..3898313,3898320..3898322)
+ /locus_tag="SARI_03965"
+ /note="pyridoxal 5'-phosphate binding pocket [chemical
+ binding]; other site"
+ /db_xref="CDD:99742"
+ misc_feature 3898320..3898322
+ /locus_tag="SARI_03965"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:99742"
+ gene 3898826..3900685
+ /locus_tag="SARI_03966"
+ CDS 3898826..3900685
+ /locus_tag="SARI_03966"
+ /inference="protein motif:HMMPfam:IPR000795"
+ /inference="protein motif:HMMPfam:IPR004161"
+ /inference="protein motif:HMMTigr:IPR004535"
+ /inference="protein motif:ScanRegExp:IPR000795"
+ /inference="protein motif:superfamily:IPR009000"
+ /note="'KEGG: eci:UTI89_C4132 1.1e-281 selB;
+ selenocysteine-specific elongation factor K03833;
+ COG: COG3276 Selenocysteine-specific translation
+ elongation factor;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="selenocysteinyl-tRNA-specific translation
+ factor"
+ /protein_id="YP_001572902.1"
+ /db_xref="GI:161505790"
+ /db_xref="InterPro:IPR000795"
+ /db_xref="InterPro:IPR004161"
+ /db_xref="InterPro:IPR004535"
+ /db_xref="InterPro:IPR009000"
+ /translation="MIIATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYAY
+ WPQPDGRVLGFIDVPGHEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLQILQLT
+ GNPQLTVALTKADRVDEARIREVREEVLATLDNYGFADAVLFVTAANEGRGIAVLRAH
+ LQQLPARLHAAQHRFRLAIDRAFTVKGAGLVVTGTALSGEVKVDDTLWLTGVDTSMRV
+ RSLHAQNQPTDHAYAGQRIALNIVGDAEKEQLNRGDWLLSDAPTGEAFYRVIVSLALH
+ APLSQWQPLHIHHAASHVTGRVSLLEGALAELIFDTPLWLADNDRLVLRDISARATLA
+ GARVVTLKAPRRGKRKPDYLQWLSTLAAAQDDSAALAIHLERGAVNLPDFGWARQLNH
+ PGMRQLIEQHGFIQAGDNLLSAPVAARWQRKILDTLATYHQQHRDEPGPGRERLRRMA
+ LPMEDEALALMLIERMRDDGLIHNHHGWLHLPDHKAGFSDEQQAVWQKVEPLFGDEPW
+ WVRDLARETGTEEQLMRLALRQAAQQGIITAIVKDRYYRNDRIVAFANMIRELDQERG
+ STCAADFRDRLNVGRKLAIQILEYFDRIGFTRRRGNDHLLRDALLFQQKECNV"
+ misc_feature 3898826..3900670
+ /locus_tag="SARI_03966"
+ /note="selenocysteinyl-tRNA-specific translation factor;
+ Provisional; Region: PRK10512"
+ /db_xref="CDD:182508"
+ misc_feature 3898829..3899326
+ /locus_tag="SARI_03966"
+ /note="SelB, the dedicated elongation factor for delivery
+ of selenocysteinyl-tRNA to the ribosome; Region: SelB;
+ cd04171"
+ /db_xref="CDD:206734"
+ misc_feature 3898832..3898855
+ /locus_tag="SARI_03966"
+ /note="G1 box; other site"
+ /db_xref="CDD:206734"
+ misc_feature order(3898835..3898837,3898841..3898843,3898853..3898858,
+ 3898865..3898867,3898874..3898879,3898946..3898951,
+ 3899006..3899011,3899078..3899083,3899195..3899197,
+ 3899207..3899209)
+ /locus_tag="SARI_03966"
+ /note="putative GEF interaction site [polypeptide
+ binding]; other site"
+ /db_xref="CDD:206734"
+ misc_feature order(3898841..3898858,3899159..3899164,3899168..3899170,
+ 3899264..3899272)
+ /locus_tag="SARI_03966"
+ /note="GTP/Mg2+ binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:206734"
+ misc_feature 3898901..3898948
+ /locus_tag="SARI_03966"
+ /note="Switch I region; other site"
+ /db_xref="CDD:206734"
+ misc_feature 3898934..3898936
+ /locus_tag="SARI_03966"
+ /note="G2 box; other site"
+ /db_xref="CDD:206734"
+ misc_feature 3898994..3899005
+ /locus_tag="SARI_03966"
+ /note="G3 box; other site"
+ /db_xref="CDD:206734"
+ misc_feature 3899000..3899056
+ /locus_tag="SARI_03966"
+ /note="Switch II region; other site"
+ /db_xref="CDD:206734"
+ misc_feature 3899159..3899170
+ /locus_tag="SARI_03966"
+ /note="G4 box; other site"
+ /db_xref="CDD:206734"
+ misc_feature 3899264..3899272
+ /locus_tag="SARI_03966"
+ /note="G5 box; other site"
+ /db_xref="CDD:206734"
+ misc_feature 3899348..3899599
+ /locus_tag="SARI_03966"
+ /note="selB_II: this subfamily represents the domain of
+ elongation factor SelB, homologous to domain II of EF-Tu.
+ SelB may function by replacing EF-Tu. In prokaryotes, the
+ incorporation of selenocysteine as the 21st amino acid,
+ encoded by TGA, requires several...; Region: selB_II;
+ cd03696"
+ /db_xref="CDD:239667"
+ misc_feature 3899579..3899839
+ /locus_tag="SARI_03966"
+ /note="This family represents the domain of elongation
+ factor SelB, homologous to domain III of EF-Tu. SelB may
+ function by replacing EF-Tu. In prokaryotes, the
+ incorporation of selenocysteine as the 21st amino acid,
+ encoded by TGA, requires several elements:...; Region:
+ selB_III; cd04094"
+ /db_xref="CDD:239761"
+ misc_feature 3900095..3900268
+ /locus_tag="SARI_03966"
+ /note="Elongation factor SelB, winged helix; Region:
+ SelB-wing_2; pfam09106"
+ /db_xref="CDD:220111"
+ misc_feature 3900497..3900643
+ /locus_tag="SARI_03966"
+ /note="Elongation factor SelB, winged helix; Region:
+ SelB-wing_3; pfam09107"
+ /db_xref="CDD:204138"
+ gene 3900863..3902014
+ /locus_tag="SARI_03967"
+ CDS 3900863..3902014
+ /locus_tag="SARI_03967"
+ /inference="protein motif:HMMPfam:IPR001670"
+ /inference="protein motif:ScanRegExp:IPR001670"
+ /inference="similar to AA sequence:INSD:AAN82846.1"
+ /note="'KEGG: ecc:c4410 2.2e-184 yiaY; probable alcohol
+ dehydrogenase K00001;
+ COG: COG1454 Alcohol dehydrogenase, class IV;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative alcohol dehydrogenase"
+ /protein_id="YP_001572903.1"
+ /db_xref="GI:161505791"
+ /db_xref="InterPro:IPR001670"
+ /translation="MAASTFFIPSVNVIGADSLKDAMNTMAEYGFRRTLIVTDAMLTK
+ LGMAGDIQKALQKRDIFSVIYDGTQPNPTTSNVAAGLKLLKENGCDSVISLGGGSPHD
+ CAKGIALVAANGGDIRDYEGVDRSAKPQLPMIAINTTAGTASEMTRFCIITDEERHIK
+ MAIVDKHVTPLLSVNDSSLMVGMPKSLTAATGMDALTHAIEAYVSIAATPITDACALK
+ AVTMIAENLIVAVEEGSNVQAREAMAYAQFLAGMAFNNASLGYVHAMAHQLGGFYNLP
+ HGVCNAVLLPHVQVFNSQVAAARLRDCAAAMGVDVSGMNEAEGAQACVAAIRQLSQKV
+ NIPAGLRELNVKEEDIPVLATNALKDACGLTNPIQATHDEIVEIYRAAM"
+ misc_feature 3900863..3902011
+ /locus_tag="SARI_03967"
+ /note="putative alcohol dehydrogenase; Provisional;
+ Region: PRK09860"
+ /db_xref="CDD:182118"
+ misc_feature 3900872..3902002
+ /locus_tag="SARI_03967"
+ /note="Lactadehyde:propanediol oxidoreductase (LPO)
+ catalyzes the interconversion between L-lactaldehyde and
+ L-1,2-propanediol in Escherichia coli and other
+ enterobacteria; Region: LPO; cd08176"
+ /db_xref="CDD:173935"
+ misc_feature order(3900890..3900904,3901373..3901375,3901502..3901504,
+ 3901595..3901597)
+ /locus_tag="SARI_03967"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:173935"
+ misc_feature order(3900977..3900979,3901151..3901159,3901274..3901279,
+ 3901286..3901288,3901313..3901315,3901340..3901342,
+ 3901397..3901399,3901421..3901423,3901442..3901444,
+ 3901454..3901456,3901649..3901651,3901691..3901693)
+ /locus_tag="SARI_03967"
+ /note="active site"
+ /db_xref="CDD:173935"
+ misc_feature order(3901442..3901444,3901454..3901456,3901649..3901651,
+ 3901691..3901693)
+ /locus_tag="SARI_03967"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:173935"
+ gene complement(3902086..3902967)
+ /locus_tag="SARI_03968"
+ CDS complement(3902086..3902967)
+ /locus_tag="SARI_03968"
+ /inference="protein motif:HMMPfam:IPR000600"
+ /inference="similar to AA sequence:REFSEQ:YP_218592.1"
+ /note="'KEGG: fnu:FN1474 3.0e-36 N-acetylmannosamine
+ kinase K00885;
+ COG: COG1940 Transcriptional regulator/sugar kinase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572904.1"
+ /db_xref="GI:161505792"
+ /db_xref="InterPro:IPR000600"
+ /translation="MQQYIGIDVGGTHVKYGVINSDGEELTHHQFDTPEDASTFTHKW
+ QDMVARCQQDYDIAAIGVSFPGHINPHNGHAAKAGALAYLDDVNLMELFSGLTDLPLV
+ VENDANCAALGEMWRGAGRHYENLVCITIGTGIGGGIIVGRELYRGAHFHAGEFGVMP
+ VGNSGESMHKIASTSGLMASCRQALALPAEEMPPADVIFERMATDVHLREAVNDWARY
+ LSRGVYSVISMFDPGVVLIGGGISEQEKLYPLLTRHLETFEMWEALQVPIQPCQLGNQ
+ AGRLGAVWLAQQKLDRS"
+ misc_feature complement(3902092..3902967)
+ /locus_tag="SARI_03968"
+ /note="Transcriptional regulator/sugar kinase
+ [Transcription / Carbohydrate transport and metabolism];
+ Region: NagC; COG1940"
+ /db_xref="CDD:224851"
+ misc_feature complement(<3902608..3902955)
+ /locus_tag="SARI_03968"
+ /note="Nucleotide-Binding Domain of the sugar
+ kinase/HSP70/actin superfamily; Region:
+ NBD_sugar-kinase_HSP70_actin; cd00012"
+ /db_xref="CDD:212657"
+ misc_feature complement(order(3902650..3902652,3902923..3902925,
+ 3902929..3902931,3902935..3902946))
+ /locus_tag="SARI_03968"
+ /note="nucleotide binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:212657"
+ gene 3903106..3904674
+ /locus_tag="SARI_03969"
+ CDS 3903106..3904674
+ /locus_tag="SARI_03969"
+ /inference="protein motif:HMMPfam:IPR002086"
+ /inference="protein motif:HMMPIR:IPR012303"
+ /inference="protein motif:ScanRegExp:IPR002086"
+ /inference="similar to AA sequence:REFSEQ:YP_152647.1"
+ /note="'KEGG: spt:SPA3531 1.2e-277 aldB; aldehyde
+ dehydrogenase B K00138;
+ COG: COG1012 NAD-dependent aldehyde dehydrogenases;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572905.1"
+ /db_xref="GI:161505793"
+ /db_xref="InterPro:IPR002086"
+ /db_xref="InterPro:IPR012303"
+ /translation="MEYLYNKELVMTNNPPSTRIQPGEYGYPLKLKARYDNFIGGNWV
+ APAGGEYYQNLTPVTGQPLCEVASSGKKDIDLALDAAHKAKDKWAHTSVQDRAAILFK
+ IADRMEQNLELLATAETWDNGKPIRETSAADVPLAIDHFRYFASCIRAQEGGISEVDS
+ ETVAYHFHEPLGVVGQIIPWNFPLLMASWKMAPALAAGNCVVLKPARLTPLSVLLLME
+ VIGDLLPPGVVNVVNGAGGEIGEYLATSKRIAKVAFTGSTEVGQQIMQYATQNIIPVT
+ LELGGKSPNIFFADVMDEEDAFFDKALEGFALFAFNQGEVCTCPSRALVQESIYERFM
+ ERAIRRVENIRSGNPLDSGTQMGAQVSHGQLETILNYIDIGKKEGADILTGGRRKELD
+ GELKEGYYLEPTILFGKNNMRVFQEEIFGPVLAVTTFKTMEEALEIANDTQYGLGAGV
+ WSRNGSLAYKMGRGIQAGRVWTNCYHAYPAHAAFGGYKQSGIGRETHKMMLEHYQQTK
+ CLLVSYSDKPLGLF"
+ misc_feature 3903208..3904647
+ /locus_tag="SARI_03969"
+ /note="Ralstonia eutrophus NAD+-dependent acetaldehyde
+ dehydrogenase II-like; Region: ALDH_ACDHII-AcoD; cd07116"
+ /db_xref="CDD:143434"
+ misc_feature 3903232..3904629
+ /locus_tag="SARI_03969"
+ /note="Aldehyde dehydrogenase family; Region: Aldedh;
+ pfam00171"
+ /db_xref="CDD:215767"
+ misc_feature order(3903634..3903648,3903670..3903672,3903715..3903717,
+ 3903721..3903726,3903865..3903876,3903883..3903885,
+ 3903892..3903897,3903937..3903945,3904054..3904056,
+ 3904357..3904359,3904363..3904365,3904441..3904443,
+ 3904555..3904557)
+ /locus_tag="SARI_03969"
+ /note="NAD(P) binding site [chemical binding]; other site"
+ /db_xref="CDD:143434"
+ misc_feature order(3903646..3903648,3903937..3903939,3904045..3904047,
+ 3904054..3904056)
+ /locus_tag="SARI_03969"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:143434"
+ gene 3904967..3905440
+ /locus_tag="SARI_03970"
+ CDS 3904967..3905440
+ /locus_tag="SARI_03970"
+ /inference="protein motif:HMMPfam:IPR001450"
+ /inference="protein motif:ScanRegExp:IPR001450"
+ /inference="similar to AA sequence:INSD:AAO71333.1"
+ /note="'KEGG: eci:UTI89_C4115 2.9e-63 ysaA, yiaI; putative
+ electron transport protein YsaA K00122;
+ COG: COG1142 Fe-S-cluster-containing hydrogenase
+ components 2;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572906.1"
+ /db_xref="GI:161505794"
+ /db_xref="InterPro:IPR001450"
+ /translation="MNRFIMADASACIGCRTCEVACVVSHQEQQNSAAVKTADFVPRI
+ RVIKEDSLTTATVCHQCEDAPCANVCPVQAIHRDRGHIFVTPSRCIGCKSCMLACPFG
+ AMTVVASASGAQAIKCDLCWHREAGPACVEACPTRALQCVDATQVQRQRLYSQPF"
+ misc_feature 3904988..3905416
+ /locus_tag="SARI_03970"
+ /note="DMSO reductase, iron-sulfur subunit; Region:
+ DMSO_dmsB; TIGR02951"
+ /db_xref="CDD:131996"
+ gene complement(3905477..3906769)
+ /gene="avtA"
+ /locus_tag="SARI_03971"
+ CDS complement(3905477..3906769)
+ /gene="avtA"
+ /locus_tag="SARI_03971"
+ /inference="protein motif:HMMPfam:IPR004839"
+ /inference="similar to AA sequence:REFSEQ:NP_458262.1"
+ /note="'transaminase C; catalyzes transamination of
+ alanine, valine, and 2-aminobutyrate with their respective
+ 2-keto acids; also catalyzes terminal step in valine
+ biosynthesis'"
+ /codon_start=1
+ /transl_table=11
+ /product="valine--pyruvate transaminase"
+ /protein_id="YP_001572907.1"
+ /db_xref="GI:161505795"
+ /db_xref="InterPro:IPR004839"
+ /translation="MVIHFDRQFDRSPFMTFSLFGDKFTRHSGITRLMEDLNDGLRTP
+ GAIMLGGGNPAHIPAMQDYFQTLLAEMVESGKAADALCNYDGPQGKTALLTALAALLR
+ EKLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLE
+ DDLFVSARPNIELLPEGQFKYHVDFEHLHIGEETGMICVSRPTNPTGNVITDEELMKL
+ DRLANQHHIPLVIDNAYGVPFPGIIFSEARPLWNPNIILCMSLSKLGLPGSRCGIIIA
+ NDKTITAIANMNGIISLAPGGIGPAMMCEMIKRNDLLRLSETVIKSFYYQRVQQTIAI
+ IRRYLPEERCLIHKPEGAIFLWLWFKDLPITTELLYQRLKARGVLMVPGHYFFPGLDK
+ PWPHTHQCMRMNYVPEPDKIEAGVKILAEEIECAWREG"
+ misc_feature complement(3905480..3906727)
+ /gene="avtA"
+ /locus_tag="SARI_03971"
+ /note="valine--pyruvate transaminase; Provisional; Region:
+ avtA; PRK09440"
+ /db_xref="CDD:236517"
+ misc_feature complement(3905507..3906631)
+ /gene="avtA"
+ /locus_tag="SARI_03971"
+ /note="Aspartate aminotransferase family. This family
+ belongs to pyridoxal phosphate (PLP)-dependent aspartate
+ aminotransferase superfamily (fold I). Pyridoxal phosphate
+ combines with an alpha-amino acid to form a compound
+ called a Schiff base or aldimine...; Region: AAT_like;
+ cd00609"
+ /db_xref="CDD:99734"
+ misc_feature complement(order(3905960..3905962,3905981..3905986,
+ 3905990..3905992,3906065..3906067,3906158..3906160,
+ 3906317..3906319,3906407..3906415))
+ /gene="avtA"
+ /locus_tag="SARI_03971"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:99734"
+ misc_feature complement(order(3905864..3905866,3905873..3905875,
+ 3905960..3905968,3906086..3906088,3906269..3906271,
+ 3906404..3906406))
+ /gene="avtA"
+ /locus_tag="SARI_03971"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99734"
+ misc_feature complement(3905981..3905983)
+ /gene="avtA"
+ /locus_tag="SARI_03971"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:99734"
+ gene complement(3906867..3907205)
+ /locus_tag="SARI_03972"
+ CDS complement(3906867..3907205)
+ /locus_tag="SARI_03972"
+ /inference="similar to AA sequence:REFSEQ:NP_462564.1"
+ /note="'KEGG: stm:STM3664 1.2e-41 malS; periplasmic
+ alpha-amylase precursor K01176;
+ COG: COG0366 Glycosidases;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572908.1"
+ /db_xref="GI:161505796"
+ /translation="MMKLAAFALTLIPAIAFASSWTSPGFPTFSAQETGRFTSQSALT
+ KGTRALTLHIDQQCWQPADAIKLNQVLSLKPCEGAPPQWRLFKDGDDTVMVVWAGRPN
+ RDATGIFARR"
+ misc_feature complement(<3906921..3907202)
+ /locus_tag="SARI_03972"
+ /note="alpha-amylase; Reviewed; Region: malS; PRK09505"
+ /db_xref="CDD:236543"
+ gene 3907551..3908342
+ /locus_tag="SARI_03973"
+ CDS 3907551..3908342
+ /locus_tag="SARI_03973"
+ /inference="protein motif:HMMPfam:IPR002901"
+ /inference="protein motif:HMMSmart:IPR013338"
+ /inference="similar to AA sequence:REFSEQ:YP_218585.1"
+ /note="'KEGG: lpl:lp_2645 0.00030 acm2; muramidase
+ K01185;
+ COG: COG2992 Uncharacterized FlgJ-related protein;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572909.1"
+ /db_xref="GI:161505797"
+ /db_xref="InterPro:IPR002901"
+ /db_xref="InterPro:IPR013338"
+ /translation="MILMLLTIVFSGEVLAKTHAMQTSQKSHVTETSYKQVSSKQEYS
+ RNSAKSSSLPDLRKYPSGTPRKKAFLRTVMPYITSQNAAITADRNWLISKQYQNRWSP
+ SERARMKDIAKRYKVRWSGNTRRIPWNTLLERVDIIPASMVATMAAAESGWGTSKLAR
+ SNNNLFGMKCAKGHCANAPGKVKGYSQFASVKESVSAYVTNLNTHPAYSSFRKSRAQL
+ RKADQEVTATAMIHKLKGYSTQGARYNNYLFAMYQDNQRLIAAHM"
+ misc_feature 3907551..3908339
+ /locus_tag="SARI_03973"
+ /note="Uncharacterized FlgJ-related protein [General
+ function prediction only]; Region: Bax; COG2992"
+ /db_xref="CDD:225539"
+ misc_feature 3907551..3908339
+ /locus_tag="SARI_03973"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10356"
+ /db_xref="CDD:182404"
+ gene complement(3908413..3909591)
+ /locus_tag="SARI_03974"
+ CDS complement(3908413..3909591)
+ /locus_tag="SARI_03974"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR000005"
+ /inference="protein motif:HMMSmart:IPR000005"
+ /inference="protein motif:ScanRegExp:IPR000005"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:REFSEQ:NP_458265.1"
+ /note="'KEGG: bcz:BCZK2914 1.4e-11 adaA;
+ methylphosphotriester-DNA alkyltransferase K00567;
+ COG: COG1609 Transcriptional regulators;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572910.1"
+ /db_xref="GI:161505798"
+ /db_xref="InterPro:IPR000005"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /translation="MFDKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEED
+ FRARIDNIKEWLGDGVIADYDDDHIAQLLADVDVPIVGVGGSYHLAENYPGVHYIATD
+ NHALVESAFLHLKEKGVNRFAFYGLPASSRKHWAAEREYAFRQLVAEEKYRGVVYQGL
+ ETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHVLQVCEHLHIPVPEKLCVIGI
+ DNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLAREEMPLQRILVPPVRVIARRS
+ TDYRSLTDPAVIQAMHFIRNHACKGIKVEQVLDAVGISRSNLEKRFKEEVGETIHAVI
+ HAEKLEKARSLLVSTTLTINEISQMCGYPSLQYFYSVFKKEYDTTPKEYRDLHSEVLL
+ "
+ misc_feature complement(3908761..3909573)
+ /locus_tag="SARI_03974"
+ /note="Ligand-binding domain of DNA transcription
+ repressor specific for xylose (XylR); Region: PBP1_XylR;
+ cd01543"
+ /db_xref="CDD:107256"
+ misc_feature complement(order(3908980..3908985,3908992..3908994,
+ 3909004..3909006,3909088..3909090,3909424..3909432,
+ 3909439..3909441,3909448..3909450,3909463..3909465,
+ 3909469..3909483,3909508..3909513,3909517..3909522,
+ 3909529..3909537,3909571..3909573))
+ /locus_tag="SARI_03974"
+ /note="putative dimerization interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:107256"
+ misc_feature complement(3908761..>3909540)
+ /locus_tag="SARI_03974"
+ /note="Transcriptional regulators [Transcription]; Region:
+ PurR; COG1609"
+ /db_xref="CDD:224525"
+ misc_feature complement(order(3908881..3908883,3908935..3908937,
+ 3909097..3909099,3909175..3909177,3909289..3909291,
+ 3909340..3909342,3909403..3909405,3909526..3909528,
+ 3909535..3909540))
+ /locus_tag="SARI_03974"
+ /note="putative ligand binding site [chemical binding];
+ other site"
+ /db_xref="CDD:107256"
+ misc_feature complement(3908587..3908712)
+ /locus_tag="SARI_03974"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ misc_feature complement(3908440..3908691)
+ /locus_tag="SARI_03974"
+ /note="helix_turn_helix, arabinose operon control protein;
+ Region: HTH_ARAC; smart00342"
+ /db_xref="CDD:197666"
+ misc_feature complement(3908440..3908550)
+ /locus_tag="SARI_03974"
+ /note="Bacterial regulatory helix-turn-helix proteins,
+ AraC family; Region: HTH_AraC; pfam00165"
+ /db_xref="CDD:215763"
+ gene 3909696..3909872
+ /locus_tag="SARI_03975"
+ CDS 3909696..3909872
+ /locus_tag="SARI_03975"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572911.1"
+ /db_xref="GI:161505799"
+ /translation="MRNSSQQTADDNCHFLSTYYGFLFIFQDSSAIAFFSCGFQRFFE
+ SQSTFGYSLNSGVK"
+ gene 3909942..3911276
+ /locus_tag="SARI_03976"
+ CDS 3909942..3911276
+ /locus_tag="SARI_03976"
+ /inference="protein motif:HMMPfam:IPR012307"
+ /inference="protein motif:HMMTigr:IPR013452"
+ /inference="protein motif:ScanRegExp:IPR001998"
+ /inference="similar to AA sequence:INSD:AAX67502.1"
+ /note="catalyzes the interconversion of D-xylose to
+ D-xylulose"
+ /codon_start=1
+ /transl_table=11
+ /product="xylose isomerase"
+ /protein_id="YP_001572912.1"
+ /db_xref="GI:161505800"
+ /db_xref="InterPro:IPR001998"
+ /db_xref="InterPro:IPR012307"
+ /db_xref="InterPro:IPR013452"
+ /translation="MELTMQAYFDQLDRVRYEGPQSTNPLAFRHYNPDELVLGKRMED
+ HLRFAACYWHTFCWNGADMFGVGAFNRPWQQPGEALELAKRKADVAFEFFHKLNVPFY
+ CFHDVDVSPEGASLKEYKNNFAQMVDVLAAKQEQSGVKLLWGTANCFTNPRYGAGAAT
+ NPDPDVFSWAATQVVTAMNATHKLGGENYVLWGGREGYETLLNTDLRQEREQIGRFMQ
+ MVVEHKHKIGFQGTLLIEPKPQEPTKHQYDYDVATVYGFLKQFGLEKEIKVNIEANHA
+ TLAGHSFHHEIATAIALGIFGSVDANRGDAQLGWDTDQFPISVEENALVMYEILKAGG
+ FTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALSLKIAARMVEDGELDKRVAKRYA
+ GWNGELGQQILKGQLSLGELAQYAEQHNLAPVHQSGHQELLENLVNRYLFDK"
+ misc_feature 3909960..3911270
+ /locus_tag="SARI_03976"
+ /note="xylose isomerase; Provisional; Region: PRK05474"
+ /db_xref="CDD:235487"
+ misc_feature 3909963..3911264
+ /locus_tag="SARI_03976"
+ /note="xylose isomerase; Region: xylose_isom_A; TIGR02630"
+ /db_xref="CDD:233956"
+ STS 3910818..3911962
+ /standard_name="ha2601"
+ /db_xref="UniSTS:515571"
+ gene 3911376..3912830
+ /locus_tag="SARI_03977"
+ CDS 3911376..3912830
+ /locus_tag="SARI_03977"
+ /inference="protein motif:HMMPanther:IPR000577"
+ /inference="protein motif:HMMPfam:IPR000577"
+ /inference="protein motif:HMMTigr:IPR006000"
+ /inference="protein motif:ScanRegExp:IPR000577"
+ /inference="similar to AA sequence:REFSEQ:YP_152628.1"
+ /note="'KEGG: spt:SPA3511 6.6e-254 xylB; xylulose kinase
+ K00854;
+ COG: COG1070 Sugar (pentulose and hexulose) kinases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572913.1"
+ /db_xref="GI:161505801"
+ /db_xref="InterPro:IPR000577"
+ /db_xref="InterPro:IPR006000"
+ /translation="MYIGIDLGTSGVKAILLNEQGDVLATHTEKLTVSRPHPLWSEQE
+ PEQWWQATDRAVKSLGRQQSLNGVRALGIAGQMHGATLLDSRQQVLRPAILWNDGRCS
+ EECAWLEKQAPQSRAITGNLMMPGFTAPKLVWVQRHEPDIFRQIDKVLLPKDFLRLRM
+ TGVFASDMSDAAGTMWLDVKKRDWSDVMLSACHLTRQQMPELFEGSEITGALLPEVAS
+ AWGMPSVPVVAGGGDNAAGAVGVGMIDAGQAILSLGTSGVYFAVSDGFLSKPESAVHS
+ FCHALPERWHLMSVMLSAASCLDWAAKLTGQASVPALIAAAQQADEHTDPVWFLPYLS
+ GERTPHNNPQAKGVFFGLTHQHGPAELARAVLEGVGYALADGMDAVHACGVRPASVTL
+ IGGGARSEYWRQMLSDISGLQLDYRTGGDVGPALGAARLAQIAVNRQMPLADMLPQLP
+ LEQAHYPDVQRHTVYQQRRETFRRLYLQLLPLMS"
+ misc_feature 3911376..3912827
+ /locus_tag="SARI_03977"
+ /note="xylulokinase; Provisional; Region: PRK15027"
+ /db_xref="CDD:184987"
+ misc_feature 3911376..3912803
+ /locus_tag="SARI_03977"
+ /note="Escherichia coli xylulokinase-like D-xylulose
+ kinases; a subgroup of the FGGY family of carbohydrate
+ kinases; Region: FGGY_D-XK_EcXK-like; cd07808"
+ /db_xref="CDD:198374"
+ misc_feature order(3911379..3911393,3911412..3911414,3911418..3911420,
+ 3911424..3911426,3911436..3911438,3911583..3911594,
+ 3911721..3911723,3911730..3911741,3911745..3911747,
+ 3911754..3911756,3911877..3911882,3911889..3911894,
+ 3911910..3911912,3911919..3911921,3911985..3911993,
+ 3911997..3911999,3912057..3912059,3912063..3912065,
+ 3912072..3912101,3912117..3912119,3912123..3912125,
+ 3912147..3912149,3912153..3912155,3912171..3912173,
+ 3912177..3912179,3912183..3912185,3912198..3912215,
+ 3912219..3912230,3912237..3912239,3912645..3912686,
+ 3912717..3912722)
+ /locus_tag="SARI_03977"
+ /note="N- and C-terminal domain interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:198374"
+ misc_feature order(3911391..3911393,3911397..3911408,3911412..3911414,
+ 3911601..3911609,3911661..3911663,3912072..3912077,
+ 3912132..3912140,3912237..3912239,3912258..3912263,
+ 3912267..3912272,3912303..3912308,3912312..3912314,
+ 3912555..3912563,3912570..3912572)
+ /locus_tag="SARI_03977"
+ /note="active site"
+ /db_xref="CDD:198374"
+ misc_feature order(3911391..3911393,3911397..3911408,3911412..3911414,
+ 3912072..3912074,3912132..3912140,3912258..3912263,
+ 3912267..3912272,3912303..3912308,3912312..3912314,
+ 3912555..3912563,3912570..3912572)
+ /locus_tag="SARI_03977"
+ /note="MgATP binding site [chemical binding]; other site"
+ /db_xref="CDD:198374"
+ misc_feature order(3911391..3911393,3911400..3911402,3912072..3912074)
+ /locus_tag="SARI_03977"
+ /note="catalytic site [active]"
+ /db_xref="CDD:198374"
+ misc_feature order(3911391..3911393,3912072..3912074)
+ /locus_tag="SARI_03977"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:198374"
+ misc_feature order(3911601..3911609,3911661..3911663,3912072..3912077,
+ 3912237..3912239)
+ /locus_tag="SARI_03977"
+ /note="xylulose binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:198374"
+ misc_feature order(3912273..3912275,3912282..3912287,3912408..3912431,
+ 3912441..3912449,3912456..3912458)
+ /locus_tag="SARI_03977"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:198374"
+ gene 3913005..3913358
+ /locus_tag="SARI_03978"
+ CDS 3913005..3913358
+ /locus_tag="SARI_03978"
+ /inference="protein motif:HMMPfam:IPR008024"
+ /inference="similar to AA sequence:INSD:AAV79315.1"
+ /note="'COG: COG4682 Predicted membrane protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572914.1"
+ /db_xref="GI:161505802"
+ /db_xref="InterPro:IPR008024"
+ /translation="MDDNVTRRKRLLGLGMLVVGAVVYLVGLWPACHTLSEKGYFFAA
+ MVMCGFPLLIRQEHTGNDRLLSRCKYLLLLGVGMVAVGVFNLELAGALKILCLVALGF
+ SLYGTDIYATYSDDA"
+ misc_feature 3913005..3913355
+ /locus_tag="SARI_03978"
+ /note="Predicted membrane protein [Function unknown];
+ Region: COG4682"
+ /db_xref="CDD:227027"
+ misc_feature <3913089..3913187
+ /locus_tag="SARI_03978"
+ /note="yiaA/B two helix domain; Region: YiaAB; pfam05360"
+ /db_xref="CDD:114102"
+ misc_feature <3913254..3913352
+ /locus_tag="SARI_03978"
+ /note="yiaA/B two helix domain; Region: YiaAB; cl01759"
+ /db_xref="CDD:242693"
+ gene complement(3913381..3914376)
+ /locus_tag="SARI_03979"
+ CDS complement(3913381..3914376)
+ /locus_tag="SARI_03979"
+ /inference="protein motif:HMMPfam:IPR002656"
+ /inference="similar to AA sequence:REFSEQ:YP_218580.1"
+ /note="'COG: COG3274 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572915.1"
+ /db_xref="GI:161505803"
+ /db_xref="InterPro:IPR002656"
+ /translation="MQPKINWIDNLRGIACLMVVMIHTTTWYITNAHSVSPLNWDIAN
+ ILNSASRVSVPLFFMISGYLFFGERSAQSRHFLRIALCLIFYSVVALIYISLFTSINA
+ ELSLKNLLQKPVFYHLWFFFAIAVIYLVSPLIQVKNVSGKMLLTMMMVIGIIANPNTV
+ PQKIGGVEWLPINLYISGDTFYYILYGMLGRAIGMMETQKQSLTLICAALFIIAVFII
+ SRGTLHELRWRGNFADTWYLYCGPMVFICAVSLFTVVKNKLNARTLPGLGLISRHSLG
+ IYGFHALIIHALRTNGLELKRWPPLDIGWIFSATVAGSLLLSMLLQRIDKQKWVS"
+ misc_feature complement(3913384..3914376)
+ /locus_tag="SARI_03979"
+ /note="Predicted O-acyltransferase [General function
+ prediction only]; Region: COG3274"
+ /db_xref="CDD:225813"
+ misc_feature complement(3913414..3914364)
+ /locus_tag="SARI_03979"
+ /note="Acyltransferase family; Region: Acyl_transf_3;
+ pfam01757"
+ /db_xref="CDD:216682"
+ gene 3914545..3914847
+ /locus_tag="SARI_03980"
+ CDS 3914545..3914847
+ /locus_tag="SARI_03980"
+ /inference="similar to AA sequence:REFSEQ:YP_152625.1"
+ /note="'COG: NOG10996 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572916.1"
+ /db_xref="GI:161505804"
+ /translation="MTMKYFFPVMIAIALVGCTETQPPTQKAQQSKVSPTRTLDMEAL
+ CKDQAARRYNTDAQKIDVTGFEQFQGSYEMRGNTFRKESFVCSFDADGQFLHLSMR"
+ misc_feature 3914614..3914844
+ /locus_tag="SARI_03980"
+ /note="YsaB-like lipoprotein; Region: YsaB; pfam13983"
+ /db_xref="CDD:206153"
+ gene 3914985..3915896
+ /gene="glyQ"
+ /locus_tag="SARI_03981"
+ CDS 3914985..3915896
+ /gene="glyQ"
+ /locus_tag="SARI_03981"
+ /inference="protein motif:BlastProDom:IPR002310"
+ /inference="protein motif:HMMPfam:IPR002310"
+ /inference="protein motif:HMMTigr:IPR002310"
+ /inference="similar to AA sequence:REFSEQ:YP_152624.1"
+ /note="glycine--tRNA ligase alpha chain; GlyRS; class II
+ aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2);
+ catalyzes a two-step reaction; first charging a glycine
+ molecule by linking its carboxyl group to the
+ alpha-phosphate of ATP; second by transfer of the
+ aminoacyl-adenylate to its tRNA"
+ /codon_start=1
+ /transl_table=11
+ /product="glycyl-tRNA synthetase subunit alpha"
+ /protein_id="YP_001572917.1"
+ /db_xref="GI:161505805"
+ /db_xref="InterPro:IPR002310"
+ /translation="MQKFDTRTFQGLILTLQDYWARQGCTIVQPLDMEVGAGTSHPMT
+ CLRALGPEPMATAYVQPSRRPTDGRYGENPNRLQHYYQFQVVIKPSPENIQELYLGSL
+ KELGMDPTIHDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVT
+ GEITYGLERLAMYIQGVDSVYDLVWSDGPLGKTTYGDVFHQNEVEQSTYNFEYADVDF
+ LFTCFEQYEKEAQQLLALENPLPLPAYERILKAAHSFNLLDARKAISVTERQRYILRI
+ RTLTKAVAEAYYASREALGFPMCNKEK"
+ misc_feature 3915006..3915860
+ /gene="glyQ"
+ /locus_tag="SARI_03981"
+ /note="Class II Glycyl-tRNA synthetase (GlyRS) alpha
+ subunit core catalytic domain. GlyRS functions as a
+ homodimer in eukaryotes, archaea and some bacteria and as
+ a heterotetramer in the remainder of prokaryotes and in
+ arabidopsis. It is responsible for the...; Region:
+ GlyRS_alpha_core; cd00733"
+ /db_xref="CDD:238375"
+ misc_feature order(3915012..3915014,3915024..3915026,3915036..3915038,
+ 3915060..3915065,3915069..3915071,3915075..3915086,
+ 3915132..3915134,3915159..3915161,3915171..3915173,
+ 3915219..3915221,3915537..3915539,3915588..3915590,
+ 3915597..3915602,3915621..3915623,3915627..3915629,
+ 3915636..3915638,3915645..3915650,3915657..3915662,
+ 3915675..3915677,3915684..3915686,3915696..3915698,
+ 3915702..3915713,3915720..3915722,3915732..3915734)
+ /gene="glyQ"
+ /locus_tag="SARI_03981"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238375"
+ misc_feature 3915057..3915080
+ /gene="glyQ"
+ /locus_tag="SARI_03981"
+ /note="motif 1; other site"
+ /db_xref="CDD:238375"
+ misc_feature order(3915093..3915095,3915099..3915101,3915174..3915176,
+ 3915222..3915224,3915228..3915230,3915234..3915242,
+ 3915405..3915410,3915420..3915422,3915468..3915473,
+ 3915477..3915482,3915486..3915491)
+ /gene="glyQ"
+ /locus_tag="SARI_03981"
+ /note="active site"
+ /db_xref="CDD:238375"
+ misc_feature 3915171..3915182
+ /gene="glyQ"
+ /locus_tag="SARI_03981"
+ /note="motif 2; other site"
+ /db_xref="CDD:238375"
+ misc_feature 3915480..3915491
+ /gene="glyQ"
+ /locus_tag="SARI_03981"
+ /note="motif 3; other site"
+ /db_xref="CDD:238375"
+ gene complement(3915213..3917162)
+ /locus_tag="SARI_03983"
+ CDS complement(3915213..3917162)
+ /locus_tag="SARI_03983"
+ /inference="similar to AA sequence:REFSEQ:ZP_00415287.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572918.1"
+ /db_xref="GI:161505807"
+ /translation="MARVVHPHHTLSIGELKDHVGHQIALGQQARAGGVVHVSANLTG
+ NPARQRLNAIGLVTQCTELLLEQDGLQTRKMVFQAFFAVSIEEELSIRQAWTHYFLVT
+ GNDLLRVCRLNVGDEDKVRQQLARVIINREILLVALHGVHQRFGRHSEEFFFEFRRQY
+ HRPFHQRGDFFQQAFAQVGIAANLARRLFCIRFDFSFTRFVVRNNFAAFQQNLRVLIG
+ SIDGELRLAHKAMAANHTIGLNPQNGCRNDVIAQQQGHGVHRTHEVNVGRAPAHQFRN
+ RQFRQRRSHHIWHQRFGTFALNMGAIQQPFAFVGFQTFGLVNGDPAAARPAFCRFAWF
+ TFGVKRLSNRRTAFFDFAIGLRFSKIRYFQRQTARGGKPFNLAVREASVIQLRSKVRS
+ KGLRQAAQGFWRQLFSADFHQKSFLRHGRLLFLFVAHREAEGFTGSIISFRHCFGQGA
+ NTQNVALTFSDGNGFTRIQQVKAMGGFQNTLVGRERQRVFQRQQLLRFFFILLEAGEQ
+ EIHIGVFKVIGGLLHFILMEHVAVSGFTQRAVAPDQIINAVYALDVHCQTFQTVGYFP
+ GHRFTFQTTNLLEVGELRHFHAVQPHFPAQPPSAQRWVFPVIFHETDIVNGWVHTQFF
+ QRTEVQLLNVFRRRFNHHLKLIIVL"
+ gene 3915906..3917975
+ /gene="glyS"
+ /locus_tag="SARI_03982"
+ CDS 3915906..3917975
+ /gene="glyS"
+ /locus_tag="SARI_03982"
+ /inference="protein motif:HMMPfam:IPR002311"
+ /inference="protein motif:HMMPfam:IPR008909"
+ /inference="protein motif:HMMTigr:IPR002311"
+ /inference="protein motif:superfamily:IPR009080"
+ /note="glycine--tRNA ligase beta chain; glyS; class II
+ aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2);
+ catalyzes a two-step reaction; first charging a glycine
+ molecule by linking the carboxyl group to the
+ alpha-phosphate of ATP; second by transfer of the
+ aminoacyl-adenylate to its tRNA"
+ /codon_start=1
+ /transl_table=11
+ /product="glycyl-tRNA synthetase subunit beta"
+ /protein_id="YP_001572919.1"
+ /db_xref="GI:161505806"
+ /db_xref="InterPro:IPR002311"
+ /db_xref="InterPro:IPR008909"
+ /db_xref="InterPro:IPR009080"
+ /translation="MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGK
+ VEWFAAPRRLALKVANLAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITV
+ DQAERLKTDKGEWLLYRAHVKGESTEALVPNMVATSLAKLPIPKLMRWGASDVHFVRP
+ VHTVTLLLGDNVIPATILGIQSDRVIRGHRFMGEPEFTIDTADQYPQILLERGKVIAD
+ YEARKAKIKADAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEA
+ LVYTMKGDQKYFPVYDNAGKLLPNFIFVANIESTDPQQIISGNEKVVRPRLADAEFFF
+ NTDRKKRLEDHLPRLQTVLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNHATRAGLL
+ SKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC
+ ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLALDLQTLTEEAV
+ RLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKA
+ VSHFRTLEEASALAAANKRVSNILAKATEPLNDIVHASVLKEAAEIELARHLVVLRDK
+ LQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQV
+ ADISLLQ"
+ misc_feature 3915915..3917972
+ /gene="glyS"
+ /locus_tag="SARI_03982"
+ /note="glycyl-tRNA synthetase subunit beta; Validated;
+ Region: glyS; PRK01233"
+ /db_xref="CDD:234925"
+ misc_feature 3917649..3917942
+ /gene="glyS"
+ /locus_tag="SARI_03982"
+ /note="DALR anticodon binding domain; Region: DALR_1;
+ pfam05746"
+ /db_xref="CDD:218729"
+ gene 3918162..3918506
+ /locus_tag="SARI_03984"
+ CDS 3918162..3918506
+ /locus_tag="SARI_03984"
+ /inference="protein motif:HMMPfam:IPR001584"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:INSD:AAB18535.2"
+ /note="'COG: COG2801 Transposase and inactivated
+ derivatives;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572920.1"
+ /db_xref="GI:161505808"
+ /db_xref="InterPro:IPR001584"
+ /db_xref="InterPro:IPR012337"
+ /translation="MRLFVSGIHQKAEREKLHLTINQKCTAPIIDLFNNEVISCSISE
+ RPTMPMIDDILMKAFARLDASTNPVLHSDQGWQYRHQWYQYQLREFGIIQSMSRKGNG
+ LDNACAEFFSGL"
+ misc_feature 3918240..3918494
+ /locus_tag="SARI_03984"
+ /note="Integrase core domain; Region: rve; pfam00665"
+ /db_xref="CDD:216050"
+ unsure 3918547..3918912
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(3918854..3919135)
+ /locus_tag="SARI_03985"
+ CDS complement(3918854..3919135)
+ /locus_tag="SARI_03985"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572921.1"
+ /db_xref="GI:161505809"
+ /translation="MPPLTFAFWEIDLFFSTFFPPQINDRIARSTPRYVAQSVPMWLF
+ NHSSIPTLLFYLKKINVLLAFAIEFSKNTKYLKAFWNLNFYIKLFNDQE"
+ gene 3919147..3919989
+ /locus_tag="SARI_03986"
+ CDS 3919147..3919989
+ /locus_tag="SARI_03986"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572922.1"
+ /db_xref="GI:161505810"
+ /translation="MEVIFKEERIMNQKAQANENSTVIQIAGNLTQGISFAECERLFN
+ LLLTENFPRLEAIAASTAKENVDALVKATFEKIDSKIDQISVEKLAQPDVQSTFNNAV
+ QGVARKGTKIDIDLLAELLESRIEKDSTDYIDNCIEAAVEMVPKLTSDMLAILPALHF
+ IQSLTWSNPAEVDNVYGLIYDHFLSRGDDMSRSKLKTMASIGVGSYVNIMGSNTFEGM
+ KEKNNYLQGIDAELKYPRMYQALNFYDQKDLHQLTLTTPGQVIAIKMLAKIFPSMNLR
+ DFLQ"
+ gene 3920281..3920568
+ /locus_tag="SARI_03987"
+ CDS 3920281..3920568
+ /locus_tag="SARI_03987"
+ /inference="similar to AA sequence:INSD:AAX67492.1"
+ /note="'COG: COG4453 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572923.1"
+ /db_xref="GI:161505811"
+ /translation="MLYKGCLMKSDVQLNLRAKESQRALIDAAAEILHKSRTDFILET
+ ACQAAEKVILDRRVFNFNDEQYEEFINLLDASVADDPVIEKLLARKPQWDV"
+ misc_feature 3920284..3920565
+ /locus_tag="SARI_03987"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG4453"
+ /db_xref="CDD:226860"
+ gene 3920583..3921041
+ /locus_tag="SARI_03988"
+ CDS 3920583..3921041
+ /locus_tag="SARI_03988"
+ /inference="similar to AA sequence:INSD:AAV79308.1"
+ /note="'KEGG: sat:SYN_02693 1.6e-12 acetyltransferase
+ K00680;
+ COG: COG0454 Histone acetyltransferase HPA2 and related
+ acetyltransferases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572924.1"
+ /db_xref="GI:161505812"
+ /translation="MSAFHQVAEFVSGEAVLDDWLKQKGLKNQALGAARTFVVCKKDT
+ KQVAGFYSLATGSVNHTEATGNLRRNMPDPIPVIILARLAVDLSFHGKGLGADLLHDA
+ VLRCYRVAENIGVRAIMVHALTEEAKNFYIHHGFKSSQTQQRTLFLRLPQ"
+ misc_feature <3920820..3920993
+ /locus_tag="SARI_03988"
+ /note="Acetyltransferase (GNAT) domain; Region:
+ Acetyltransf_7; pfam13508"
+ /db_xref="CDD:222185"
+ gene complement(3921413..3921952)
+ /locus_tag="SARI_03989"
+ CDS complement(3921413..3921952)
+ /locus_tag="SARI_03989"
+ /inference="similar to AA sequence:INSD:AAV79307.1"
+ /note="'COG: NOG09853 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572925.1"
+ /db_xref="GI:161505813"
+ /translation="MSKASWLLLLGLCASGSALAASSESAFLAQHGLAGKTVEQIVDT
+ IDQTPQSRPLPYSASLTSTELKLSDGEQIYTLPLGNKFYLSFAPYEWRTHPCFNHSLS
+ GCQGEMPNTTFNVKVTDNKGDVIMQKALRSYKNGFIGVWLPRDMEGTIEVSYNGKTAS
+ HAIATKGDSQTCLTELPLR"
+ gene complement(3922125..3922337)
+ /locus_tag="SARI_03990"
+ CDS complement(3922125..3922337)
+ /locus_tag="SARI_03990"
+ /inference="protein motif:BlastProDom:IPR002059"
+ /inference="protein motif:Gene3D:IPR012340"
+ /inference="protein motif:HMMPfam:IPR002059"
+ /inference="protein motif:HMMPIR:IPR012156"
+ /inference="protein motif:HMMSmart:IPR011129"
+ /inference="protein motif:ScanRegExp:IPR002059"
+ /inference="protein motif:superfamily:IPR008994"
+ /inference="similar to AA sequence:INSD:ABF05567.1"
+ /note="'COG: COG1278 Cold shock proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="major cold shock protein"
+ /protein_id="YP_001572926.1"
+ /db_xref="GI:161505814"
+ /db_xref="InterPro:IPR002059"
+ /db_xref="InterPro:IPR008994"
+ /db_xref="InterPro:IPR011129"
+ /db_xref="InterPro:IPR012156"
+ /db_xref="InterPro:IPR012340"
+ /translation="MSGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKS
+ LDEGQKVSFTIESGAKGPAAGNVASL"
+ misc_feature complement(3922137..3922325)
+ /locus_tag="SARI_03990"
+ /note="Cold-Shock Protein (CSP) contains an S1-like
+ cold-shock domain (CSD) that is found in eukaryotes,
+ prokaryotes, and archaea. CSP's include the major
+ cold-shock proteins CspA and CspB in bacteria and the
+ eukaryotic gene regulatory factor Y-box...; Region:
+ CSP_CDS; cd04458"
+ /db_xref="CDD:239905"
+ misc_feature complement(order(3922158..3922160,3922245..3922247,
+ 3922278..3922280,3922305..3922307))
+ /locus_tag="SARI_03990"
+ /note="DNA-binding site [nucleotide binding]; DNA binding
+ site"
+ /db_xref="CDD:239905"
+ misc_feature complement(order(3922239..3922250,3922269..3922289))
+ /locus_tag="SARI_03990"
+ /note="RNA-binding motif; other site"
+ /db_xref="CDD:239905"
+ gene complement(3922627..3922959)
+ /locus_tag="SARI_03991"
+ CDS complement(3922627..3922959)
+ /locus_tag="SARI_03991"
+ /inference="protein motif:superfamily:IPR010982"
+ /inference="similar to AA sequence:REFSEQ:NP_458277.1"
+ /note="'COG: COG2944 Predicted transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative transcriptional regulator"
+ /protein_id="YP_001572927.1"
+ /db_xref="GI:161505815"
+ /db_xref="InterPro:IPR010982"
+ /translation="MHFTIPLCDLQEFSMEYKDPMFELLSSLEQIVFKDETRKITLTQ
+ KPNPFTEFEQLRRGTGLKTDEFARALGVTVAMVQEWESKREKPTPAELKLMRLIQANP
+ RLSKQLME"
+ misc_feature complement(3922639..3922926)
+ /locus_tag="SARI_03991"
+ /note="Predicted transcriptional regulator
+ [Transcription]; Region: COG2944"
+ /db_xref="CDD:225495"
+ misc_feature complement(<3922675..3922800)
+ /locus_tag="SARI_03991"
+ /note="Helix-turn-helix XRE-family like proteins.
+ Prokaryotic DNA binding proteins belonging to the
+ xenobiotic response element family of transcriptional
+ regulators; Region: HTH_XRE; cd00093"
+ /db_xref="CDD:238045"
+ misc_feature complement(order(3922717..3922719,3922792..3922794))
+ /locus_tag="SARI_03991"
+ /note="salt bridge; other site"
+ /db_xref="CDD:238045"
+ misc_feature complement(order(3922714..3922716,3922789..3922791))
+ /locus_tag="SARI_03991"
+ /note="non-specific DNA binding site [nucleotide binding];
+ other site"
+ /db_xref="CDD:238045"
+ misc_feature complement(order(3922711..3922716,3922726..3922728,
+ 3922735..3922737,3922768..3922773))
+ /locus_tag="SARI_03991"
+ /note="sequence-specific DNA binding site [nucleotide
+ binding]; other site"
+ /db_xref="CDD:238045"
+ gene 3923409..3924065
+ /locus_tag="SARI_03992"
+ CDS 3923409..3924065
+ /locus_tag="SARI_03992"
+ /inference="similar to AA sequence:REFSEQ:NP_458278.1"
+ /note="'COG: NOG06217 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572928.1"
+ /db_xref="GI:161505816"
+ /translation="MVFSLSGCFDKEGDQRKAFVDFLQNTAMRSGERLPTLTADQKKQ
+ FGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYMTQREPLRQANGSLGV
+ LAQQLQNAKLQADAAHGALKQTDELKPVFDQVYKKVVTVPADALQPLIPAAQIFTQQL
+ VQVGDFIAQQGEQVSFVANGIQFPTSQQASQYNALIGPLASQHQAFNQAWTAAVNATQ
+ "
+ misc_feature 3923409..3924059
+ /locus_tag="SARI_03992"
+ /note="Protein of unknown function (DUF3053); Region:
+ DUF3053; pfam11254"
+ /db_xref="CDD:151696"
+ gene complement(3924115..3924609)
+ /locus_tag="SARI_03993"
+ CDS complement(3924115..3924609)
+ /locus_tag="SARI_03993"
+ /inference="protein motif:HMMPfam:IPR006139"
+ /inference="protein motif:HMMPfam:IPR006140"
+ /inference="protein motif:ScanRegExp:IPR006140"
+ /inference="similar to AA sequence:REFSEQ:NP_458279.1"
+ /note="'KEGG: sec:SC3578 5.5e-76 yiaE; 2-keto-D-gluconate
+ reductase K00090;
+ COG: COG1052 Lactate dehydrogenase and related
+ dehydrogenases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572929.1"
+ /db_xref="GI:161505817"
+ /db_xref="InterPro:IPR006139"
+ /db_xref="InterPro:IPR006140"
+ /translation="MEIGWSIITKPVLYNARRRHQEAEDRFNARYCDLDTLLQEADFV
+ CVILPLTAETRHLFGATQFARMKSSAIFINAGRGPVVDENALIAALKNGEIYAAGLDV
+ FEYEPLSVDSPLLGMSNVVAVPHIGSATHETRYNMMACAVDNLIDALHGKIENNCVNP
+ QAAG"
+ misc_feature complement(3924157..>3924576)
+ /locus_tag="SARI_03993"
+ /note="D-glycerate dehydrogenase/hydroxypyruvate reductase
+ (GDH); Region: GDH; cd05301"
+ /db_xref="CDD:240626"
+ misc_feature complement(order(3924226..3924231,3924235..3924237,
+ 3924304..3924309,3924379..3924387,3924448..3924453,
+ 3924463..3924471,3924550..3924552,3924559..3924567))
+ /locus_tag="SARI_03993"
+ /note="NADP binding site [chemical binding]; other site"
+ /db_xref="CDD:240626"
+ misc_feature complement(order(3924235..3924237,3924292..3924294,
+ 3924379..3924381))
+ /locus_tag="SARI_03993"
+ /note="catalytic site [active]"
+ /db_xref="CDD:240626"
+ gene complement(3924732..3925394)
+ /locus_tag="SARI_03994"
+ CDS complement(3924732..3925394)
+ /locus_tag="SARI_03994"
+ /inference="protein motif:BlastProDom:IPR006665"
+ /inference="protein motif:HMMPfam:IPR006665"
+ /inference="protein motif:HMMPfam:IPR008816"
+ /inference="protein motif:ScanRegExp:IPR006690"
+ /inference="similar to AA sequence:REFSEQ:NP_458280.1"
+ /note="'KEGG: bxe:Bxe_A4171 4.6e-05 putative cytochrome c
+ oxidase K00403;
+ COG: COG2885 Outer membrane protein and related
+ peptidoglycan-associated (lipo)proteins;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative outer membrane lipoprotein"
+ /protein_id="YP_001572930.1"
+ /db_xref="GI:161505818"
+ /db_xref="InterPro:IPR006665"
+ /db_xref="InterPro:IPR006690"
+ /db_xref="InterPro:IPR008816"
+ /translation="MKKRVFVIAAIVSGALAVSGCTTNPYTGEREAGKSGIGAGIGSL
+ VGAGIGALSSSKKDRGKGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRS
+ GDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVVGYTDSTGSHDL
+ NMRLSQQRADSVASSLITQGVDASRIRTSGMGPANPIASNSTAEGKAQNRRVEITLSP
+ LQ"
+ misc_feature complement(3924738..3925394)
+ /locus_tag="SARI_03994"
+ /note="putative outer membrane lipoprotein; Provisional;
+ Region: PRK10510"
+ /db_xref="CDD:182507"
+ misc_feature complement(3924747..3925058)
+ /locus_tag="SARI_03994"
+ /note="Peptidoglycan binding domains similar to the
+ C-terminal domain of outer-membrane protein OmpA; Region:
+ OmpA_C-like; cd07185"
+ /db_xref="CDD:143586"
+ misc_feature complement(order(3924765..3924767,3924777..3924779,
+ 3924903..3924905,3924912..3924917,3924927..3924929,
+ 3924936..3924941,3925038..3925043))
+ /locus_tag="SARI_03994"
+ /note="ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:143586"
+ gene 3925529..3927880
+ /locus_tag="SARI_03995"
+ CDS 3925529..3927880
+ /locus_tag="SARI_03995"
+ /inference="protein motif:HMMPfam:IPR006656"
+ /inference="protein motif:HMMPfam:IPR006657"
+ /inference="protein motif:HMMTigr:IPR006658"
+ /inference="protein motif:ScanRegExp:IPR006655"
+ /inference="protein motif:superfamily:IPR009010"
+ /note="'KEGG: spt:SPA3496 0. bisC; biotin sulfoxide
+ reductase K08351;
+ COG: COG0243 Anaerobic dehydrogenases, typically
+ selenocysteine-containing;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="biotin sulfoxide reductase"
+ /protein_id="YP_001572931.1"
+ /db_xref="GI:161505819"
+ /db_xref="InterPro:IPR006655"
+ /db_xref="InterPro:IPR006656"
+ /db_xref="InterPro:IPR006657"
+ /db_xref="InterPro:IPR006658"
+ /db_xref="InterPro:IPR009010"
+ /translation="MIQERTLTHAPSRHSVLTAAHWGPVRVETDGERIFASYGELPTT
+ HQNSLQTVVHEQVYSKTRVRFPMVRKGFLASPDKPQGVRGQDEFVRVSWDDALDLIHA
+ QHKRIRENYGPSSIFAGSYGWRSNGVLHKAATLLQRYMALAGGYTGHLGDYSTGAAQA
+ IMPYVVGGNEVYQQQTSWPVVLEHSDVVVLWSANPLNTLKIAWNASDEQGLEYFAALR
+ KSGKRLICIDPMRSESVDFFGDKMEWIAPHMGTDVALMLGIAHTLVENSWQDEAFLAR
+ CTTGYDVFADYLLGVTDGTAKTAEWAAEICGVSAGKIRELAEIFHHNTTMLMAGWGMQ
+ RQQFGEQKHWMIVTLAAMLGQIGAPGGGFGFSYHFANGGNPTRRAAVLASMQESITGG
+ VDAVDKIPVARIVEALENPGGFYQHNGMDRRFPDIRFIWWAGGANFTHHQDTNRLIRA
+ WQKPDLVVISECFWTAAAKHADIVLPATTSYERNDLTMTGDYSHQHLAPMKQVVLPQY
+ EARNDFDVFAELSERWESGGYARFTEGKSELAWLETFYNIAAQRGASQGVTLPPFSAF
+ WQANRLLEMPENPANAQFVRFADFRRDPDNHPLKTASGKIEIYSARIASYGYADCPGH
+ PMWLVPDEWHGNADAGQVQLLSAHPAHRLHSQLNYSSLRERYAVAGREPMTIHPQDAT
+ ARGIIDGDTVRVWNHRGQVLAGAVVTEGIRPGVVCIHEGAWPDPEPTAGGICKNGAVN
+ ILTKDLASSRLGNGCAGNTALVWFEKYTGPALPLTAFDPPANS"
+ misc_feature 3925577..3927427
+ /locus_tag="SARI_03995"
+ /note="The MopB_DMSOR-BSOR-TMAOR CD contains
+ dimethylsulfoxide reductase (DMSOR), biotin sulfoxide
+ reductase (BSOR), trimethylamine N-oxide reductase
+ (TMAOR) and other related proteins. DMSOR always catalyzes
+ the reduction of DMSO to dimethylsulfide, but its...;
+ Region: MopB_DMSOR-BSOR-TMAOR; cd02769"
+ /db_xref="CDD:239170"
+ misc_feature 3925583..3927871
+ /locus_tag="SARI_03995"
+ /note="molybdopterin guanine dinucleotide-containing
+ S/N-oxide reductases; Region: bisC_fam; TIGR00509"
+ /db_xref="CDD:233001"
+ misc_feature order(3925889..3925903,3925988..3925990,3926102..3926104,
+ 3926117..3926122,3926207..3926215,3926273..3926278,
+ 3926282..3926284,3926519..3926524,3926531..3926533,
+ 3926828..3926830,3926834..3926836,3926846..3926848,
+ 3926852..3926854,3926906..3926911,3926921..3926923,
+ 3926975..3926977,3927065..3927067)
+ /locus_tag="SARI_03995"
+ /note="molybdopterin cofactor binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:239170"
+ misc_feature order(3925889..3925891,3925895..3925897,3925988..3925990)
+ /locus_tag="SARI_03995"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:239170"
+ misc_feature 3927446..3927826
+ /locus_tag="SARI_03995"
+ /note="The MopB_DMSOR-BSOR-TMAOR CD contains
+ dimethylsulfoxide reductase (DMSOR), biotin sulfoxide
+ reductase (BSOR), trimethylamine N-oxide reductase
+ (TMAOR) and other related proteins. DMSOR always catalyzes
+ the reduction of DMSO to dimethylsulfide, but its...;
+ Region: MopB_CT_DMSOR-BSOR-TMAOR; cd02793"
+ /db_xref="CDD:239194"
+ misc_feature order(3927464..3927466,3927470..3927475,3927482..3927484,
+ 3927488..3927496,3927686..3927688,3927746..3927748,
+ 3927797..3927802)
+ /locus_tag="SARI_03995"
+ /note="molybdopterin cofactor binding site; other site"
+ /db_xref="CDD:239194"
+ gene complement(3927849..3928289)
+ /locus_tag="SARI_03996"
+ CDS complement(3927849..3928289)
+ /locus_tag="SARI_03996"
+ /inference="protein motif:HMMPfam:IPR000182"
+ /inference="similar to AA sequence:REFSEQ:NP_458282.1"
+ /note="'KEGG: sty:STY4159 8.0e-75 yiaC; putative
+ acetyltransferase K03826;
+ COG: COG0454 Histone acetyltransferase HPA2 and related
+ acetyltransferases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572932.1"
+ /db_xref="GI:161505820"
+ /db_xref="InterPro:IPR000182"
+ /translation="MIRKSQSEDMASILALWMKSTIYAHPFIEERYWHESEAIVRDVY
+ LPAAQTWVWEESGQLKGFVSVLEACFVGALFVSPDALRHGIGKALLEYVQQRFPLLSL
+ EVYQKNQSAVNFYHALGFRIEDSAWQEDTSHPTWIMSWQADQMP"
+ misc_feature complement(3927930..>3928139)
+ /locus_tag="SARI_03996"
+ /note="Acetyltransferase (GNAT) domain; Region:
+ Acetyltransf_10; pfam13673"
+ /db_xref="CDD:222309"
+ misc_feature complement(3927999..3928139)
+ /locus_tag="SARI_03996"
+ /note="N-Acyltransferase superfamily: Various enzymes that
+ characteristically catalyze the transfer of an acyl group
+ to a substrate; Region: NAT_SF; cd04301"
+ /db_xref="CDD:173926"
+ misc_feature complement(order(3928029..3928034,3928062..3928070))
+ /locus_tag="SARI_03996"
+ /note="Coenzyme A binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:173926"
+ gene complement(3928267..3928848)
+ /locus_tag="SARI_03997"
+ CDS complement(3928267..3928848)
+ /locus_tag="SARI_03997"
+ /inference="protein motif:HMMPfam:IPR005019"
+ /inference="protein motif:HMMTigr:IPR004597"
+ /inference="protein motif:superfamily:IPR011257"
+ /inference="similar to AA sequence:INSD:AAX67480.1"
+ /note="'constitutive, catalyzes the hydrolysis of
+ alkylated DNA, releasing 3-methyladenine'"
+ /codon_start=1
+ /transl_table=11
+ /product="3-methyl-adenine DNA glycosylase I"
+ /protein_id="YP_001572933.1"
+ /db_xref="GI:161505821"
+ /db_xref="InterPro:IPR004597"
+ /db_xref="InterPro:IPR005019"
+ /db_xref="InterPro:IPR011257"
+ /translation="MQRCGWVSQEPLYIAYHDNEWGVPETDGRKLFEMICLEGQQAGL
+ SWITVLKKRENYRACFHQFDPVRIAAMQEQDIERLLQNTGIIRHLGKIQSIVSNARAW
+ LAMEQNGEPFADFVWSFVDGQPQITQAASLDEIPTSTPASDALSKALKKRGFKFVGTT
+ ICYSFMQACGLVNDHITGCFCHPGEKHDSQIPE"
+ misc_feature complement(3928288..3928848)
+ /locus_tag="SARI_03997"
+ /note="3-methyl-adenine DNA glycosylase I; Provisional;
+ Region: PRK10353"
+ /db_xref="CDD:182401"
+ gene 3929059..3929709
+ /locus_tag="SARI_03998"
+ CDS 3929059..3929709
+ /locus_tag="SARI_03998"
+ /inference="similar to AA sequence:REFSEQ:YP_218560.1"
+ /note="'COG: COG5571 Autotransporter protein or domain,
+ integral membrane beta-barrel involved in protein
+ secretion;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572934.1"
+ /db_xref="GI:161505822"
+ /translation="MACSFFINTAYAWQQEYIAEAAPGHTTERYTWDSDHQPNYNDIL
+ AERIQSTQNTVGPVLSLAAETPLDATSGISMGWNFPLSRRVTTGPVAALHYDGSTSSM
+ YNEYGDSATTLAFTDPLWHASVSTLGWRVNSQFGDIRSWAQISYNQQFGENIWKAQSG
+ LSRMTAVNQEGNWLDVTVGTDVLLNPHLAAYAAFSQAENSATDSDYLYTLGVSARF"
+ misc_feature 3929059..3929706
+ /locus_tag="SARI_03998"
+ /note="Autotransporter protein or domain, integral
+ membrane beta-barrel involved in protein secretion [Cell
+ motility and secretion]; Region: COG5571"
+ /db_xref="CDD:227858"
+ gene 3929940..3931631
+ /locus_tag="SARI_03999"
+ CDS 3929940..3931631
+ /locus_tag="SARI_03999"
+ /inference="protein motif:HMMPfam:IPR000917"
+ /inference="protein motif:HMMPfam:IPR012549"
+ /note="catalyzes the addition of a phosphoethanolamine
+ group to the outer Kdo residue of lipopolysaccharide"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphoethanolamine transferase"
+ /protein_id="YP_001572935.1"
+ /db_xref="GI:161505823"
+ /db_xref="InterPro:IPR000917"
+ /db_xref="InterPro:IPR012549"
+ /translation="MRYIKSMTQQKLSFLLALYIGLFMNCAVFYRRFGSYAQEFTLWK
+ GISAVVELGATVLVTFFLLRLLSLFGRRVWRVLATLVVLFSAGASYYMTFLNVVIGYG
+ IIASVMTTDIDLSKEVVGLHFVLWLISVSVLPLIFIWSNRCRYTLLRQLRTPGQRFRS
+ AAAVVLAGVMVWAPIRLLDVQQKKVERATGIDLPSYGGVVANSYLPSNWLSALGLYAW
+ AQVDESSDNNSLINPAKKFTYVAPKDNDDTYVVFIIGETTRWDHMGIFGYERNTTPKL
+ AQEKNLAAFRGYSCDTATKLSLRCMFVREGGADNNPQRTLKEQNVFAVLKQLGFTSDL
+ YAMQSEMWFYSNTMADNISYREQIGAEPRNRGKTVDDMLLIDEMQNSLARNPDGKHLI
+ ILHTKGSHFNYTQRYPRSYAQWKPECIGVDSGCTKAQMINSYDNSVTYVDHFITSVFE
+ KLRDKKAIVFYAADHGESINEREHLHGTPRNMAPPEQFRVPMLVWMSDKYLANPQHAQ
+ MFAHLKQQAEIKVPRRHVELYDTIMGCLGYTSPNGGINQNNNWCHIPDAQKVVAE"
+ misc_feature 3929940..3931613
+ /locus_tag="SARI_03999"
+ /note="phosphoethanolamine transferase; Provisional;
+ Region: PRK11560"
+ /db_xref="CDD:183198"
+ misc_feature 3930162..>3930458
+ /locus_tag="SARI_03999"
+ /note="Domain of unknown function (DUF1705); Region:
+ DUF1705; pfam08019"
+ /db_xref="CDD:149223"
+ misc_feature 3930687..3931592
+ /locus_tag="SARI_03999"
+ /note="Sulfatase; Region: Sulfatase; pfam00884"
+ /db_xref="CDD:216172"
+ gene 3931723..3931796
+ /locus_tag="SARI_04000"
+ tRNA 3931723..3931796
+ /locus_tag="SARI_04000"
+ /product="tRNA-Pro"
+ gene 3932501..3934108
+ /locus_tag="SARI_04002"
+ CDS 3932501..3934108
+ /locus_tag="SARI_04002"
+ /inference="protein motif:HMMPfam:IPR000914"
+ /inference="protein motif:ScanRegExp:IPR000914"
+ /inference="similar to AA sequence:REFSEQ:NP_458289.1"
+ /note="'KEGG: shn:Shewana3_2650 5.4e-124 acetate kinase
+ K00925;
+ COG: COG0747 ABC-type dipeptide transport system,
+ periplasmic component;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572937.1"
+ /db_xref="GI:161505825"
+ /db_xref="InterPro:IPR000914"
+ /translation="MSISLKKSGMLKLGLSLIAMTVAASVQAKTLVYCSEGSPEGFNP
+ QLFTSGTTYDASSVPIYNRLVEFKIGTTEVVPGLAEKWDISEDGKTYTFHLRKGVKWQ
+ SSKDFKPTRELNADDVVFSFDRQKNEQNPYHKVSGGSYEYFEGMGLPDLISEVKKVDD
+ HTVQFVLTRPEAPFVADLAMDFASILSKEYADNMLKAGTPEKVDLNPVGTGPFQLVQY
+ QKDSRILYKAFDGYWGTKPKIDRLVFSITPDASVRYAKLQKNECQVMPYPNPADIARM
+ KQDKNINLMEQAGLNVGYLSYNVQKKPLDDVKVRQALTYAVNKEAIIKAVYQGAGVAA
+ KNLIPPTMWGYNDDIKEYGYDPEKAKALLKEAGLEKGFTLDLWAMPVQRPYNPNARRM
+ AEMIQADWAKIGVQAKIVTYEWGEYLKRAKDGEHQTVMMGWTGDNGDPDNFFATLFSC
+ DAAQQSSNYSKWCYKPFEDLIQPARATDDHNKRVELYKQAQVVMHDQAPALIIAHSTV
+ YEPVRKEVKGYVVDPLGKHHFENVSVE"
+ misc_feature 3932555..3934105
+ /locus_tag="SARI_04002"
+ /note="ABC-type dipeptide transport system, periplasmic
+ component [Amino acid transport and metabolism]; Region:
+ DdpA; COG0747"
+ /db_xref="CDD:223818"
+ misc_feature 3932588..3934057
+ /locus_tag="SARI_04002"
+ /note="The substrate-binding component of an ABC-type
+ dipeptide import system contains the type 2 periplasmic
+ binding fold; Region: PBP2_DppA_like; cd08493"
+ /db_xref="CDD:173858"
+ misc_feature order(3933740..3933742,3933752..3933754,3933791..3933802,
+ 3933806..3933808)
+ /locus_tag="SARI_04002"
+ /note="peptide binding site [polypeptide binding]; other
+ site"
+ /db_xref="CDD:173858"
+ gene 3934266..3935285
+ /locus_tag="SARI_04003"
+ CDS 3934266..3935285
+ /locus_tag="SARI_04003"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="similar to AA sequence:REFSEQ:YP_152606.1"
+ /note="transports peptides consisting of two or three
+ amino acids"
+ /codon_start=1
+ /transl_table=11
+ /product="dipeptide transporter permease DppB"
+ /protein_id="YP_001572938.1"
+ /db_xref="GI:161505826"
+ /db_xref="InterPro:IPR000515"
+ /translation="MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGI
+ SPERHAQLLAELGLDKPMWQQYLHYIWGVMHGDLGISLKSRIPVWDEFVPRFKATLEL
+ GVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHW
+ NLTPVSGRVSDMVFLDDTNPLTGFMLIDTAIWGEEGNFIDALAHMILPAIVLGTIPLA
+ VIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIIHALRNAMLPVVTVIGLQVGTLLA
+ GAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPR
+ IRHKK"
+ misc_feature 3934266..3935282
+ /locus_tag="SARI_04003"
+ /note="ABC-type dipeptide/oligopeptide/nickel transport
+ systems, permease components [Amino acid transport and
+ metabolism / Inorganic ion transport and metabolism];
+ Region: DppB; COG0601"
+ /db_xref="CDD:223674"
+ misc_feature 3934551..3935243
+ /locus_tag="SARI_04003"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature order(3934599..3934604,3934611..3934616,3934629..3934631,
+ 3934662..3934673,3934677..3934706,3934713..3934718,
+ 3934722..3934724,3934908..3934913,3934917..3934919,
+ 3934923..3934925,3934932..3934937,3934941..3934943,
+ 3934953..3934958,3934965..3934967,3935016..3935018,
+ 3935058..3935063,3935070..3935072,3935091..3935102,
+ 3935109..3935114,3935139..3935144,3935193..3935198,
+ 3935205..3935210,3935214..3935219,3935226..3935231,
+ 3935238..3935243)
+ /locus_tag="SARI_04003"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(3934680..3934724,3935091..3935108)
+ /locus_tag="SARI_04003"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(3934722..3934724,3934893..3934895,3935109..3935111,
+ 3935133..3935135,3935142..3935144,3935193..3935195)
+ /locus_tag="SARI_04003"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(3934968..3935006,3935022..3935027,3935037..3935039)
+ /locus_tag="SARI_04003"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene 3935295..3936197
+ /locus_tag="SARI_04004"
+ CDS 3935295..3936197
+ /locus_tag="SARI_04004"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="similar to AA sequence:REFSEQ:YP_152605.1"
+ /note="'KEGG: bpm:BURPS1710b_A0449 5.3e-05 glycine
+ betaine/L-proline ABC transporter, permease protein
+ K02001;
+ COG: COG1173 ABC-type dipeptide/oligopeptide/nickel
+ transport systems, permease components;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="dipeptide transporter"
+ /protein_id="YP_001572939.1"
+ /db_xref="GI:161505827"
+ /db_xref="InterPro:IPR000515"
+ /translation="MSQVTENNVIAAPAPMTPLREFWHYFKRNKGAVVGLAYVIIMIL
+ IAVFANFIAPHNPAEQFRDALLVPPVWQEGGSWAHILGTDDVGRDVLSRLMYGARLSM
+ LVGCLVVVLSLVMGIVLGLVAGYFGGLVDNIIMRVVDIMLALPSLLLALVLVAIFGPS
+ IGNAALALTFVALPHYVRLTRAAVLVEVNRDYVTASRVAGAGAMRQMFINIFPNCLAP
+ LIVQASLGFSNAILDMAALGFLGMGAQPPTPEWGTMLSDVLQFAQSAWWVVTFPGLAI
+ LLTVLAFNLMGDGLRDALDPKLKQ"
+ misc_feature 3935295..3936194
+ /locus_tag="SARI_04004"
+ /note="dipeptide transporter; Provisional; Region:
+ PRK10913"
+ /db_xref="CDD:182833"
+ misc_feature 3935337..3935501
+ /locus_tag="SARI_04004"
+ /note="N-terminal TM domain of oligopeptide transport
+ permease C; Region: OppC_N; pfam12911"
+ /db_xref="CDD:221848"
+ misc_feature 3935643..3936134
+ /locus_tag="SARI_04004"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature order(3935646..3935651,3935664..3935666,3935694..3935705,
+ 3935709..3935738,3935745..3935750,3935754..3935756,
+ 3935805..3935810,3935814..3935816,3935820..3935822,
+ 3935829..3935834,3935838..3935840,3935850..3935855,
+ 3935862..3935864,3935913..3935915,3935955..3935960,
+ 3935967..3935969,3935988..3935999,3936006..3936011,
+ 3936051..3936056,3936090..3936095,3936102..3936107,
+ 3936111..3936116,3936123..3936128)
+ /locus_tag="SARI_04004"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(3935712..3935756,3935988..3936005)
+ /locus_tag="SARI_04004"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(3935754..3935756,3935790..3935792,3936006..3936008,
+ 3936045..3936047,3936054..3936056,3936090..3936092)
+ /locus_tag="SARI_04004"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(3935865..3935903,3935919..3935924,3935934..3935936)
+ /locus_tag="SARI_04004"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene 3936208..3937191
+ /gene="dppD"
+ /locus_tag="SARI_04005"
+ CDS 3936208..3937191
+ /gene="dppD"
+ /locus_tag="SARI_04005"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMPfam:IPR013563"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR010066"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:REFSEQ:YP_152604.1"
+ /note="DppD and DppF are the ATP-binding components of the
+ ABC dipeptide transport system DppABCDF"
+ /codon_start=1
+ /transl_table=11
+ /product="dipeptide transporter ATP-binding subunit"
+ /protein_id="YP_001572940.1"
+ /db_xref="GI:161505828"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR010066"
+ /db_xref="InterPro:IPR013563"
+ /translation="MALLNIDQLSVHFGDEGTPFKAVDRISYSVKQGEVVGIVGESGS
+ GKSVSSLAIMGLIDYPGRVMAENLLFNGQDLTRISEKERRNLVGAEVAMIFQDPMTSL
+ NPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
+ RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVA
+ EAAHKIIVMYAGQVVETGDAQDIFRAPRHPYTQALLRALPEFAQDKARLASLPGVVPG
+ KYDRPTGCLLNPRCPYATDRCRAEEPALNQLDDGRQSKCHYPLDDAGRPTL"
+ misc_feature 3936208..3937188
+ /gene="dppD"
+ /locus_tag="SARI_04005"
+ /note="dipeptide transporter ATP-binding subunit;
+ Provisional; Region: dppD; PRK11022"
+ /db_xref="CDD:182906"
+ misc_feature 3936214..3936915
+ /gene="dppD"
+ /locus_tag="SARI_04005"
+ /note="ATP-binding cassette domain of nickel/oligopeptides
+ specific transporters; Region: ABC_NikE_OppD_transporters;
+ cd03257"
+ /db_xref="CDD:213224"
+ misc_feature 3936325..3936348
+ /gene="dppD"
+ /locus_tag="SARI_04005"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213224"
+ misc_feature order(3936334..3936339,3936343..3936351,3936493..3936495,
+ 3936739..3936744,3936841..3936843)
+ /gene="dppD"
+ /locus_tag="SARI_04005"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213224"
+ misc_feature 3936484..3936495
+ /gene="dppD"
+ /locus_tag="SARI_04005"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213224"
+ misc_feature 3936667..3936696
+ /gene="dppD"
+ /locus_tag="SARI_04005"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213224"
+ misc_feature 3936727..3936744
+ /gene="dppD"
+ /locus_tag="SARI_04005"
+ /note="Walker B; other site"
+ /db_xref="CDD:213224"
+ misc_feature 3936751..3936762
+ /gene="dppD"
+ /locus_tag="SARI_04005"
+ /note="D-loop; other site"
+ /db_xref="CDD:213224"
+ misc_feature 3936829..3936849
+ /gene="dppD"
+ /locus_tag="SARI_04005"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213224"
+ misc_feature 3936898..3937158
+ /gene="dppD"
+ /locus_tag="SARI_04005"
+ /note="oligopeptide/dipeptide ABC transporter, ATP-binding
+ protein, C-terminal domain; Region: oligo_HPY; TIGR01727"
+ /db_xref="CDD:213647"
+ gene 3937188..3938201
+ /gene="dppF"
+ /locus_tag="SARI_04006"
+ CDS 3937188..3938201
+ /gene="dppF"
+ /locus_tag="SARI_04006"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMPfam:IPR013563"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR010066"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:REFSEQ:YP_218544.1"
+ /note="Part of the ABC transporter complex DppABCDF
+ involved in the transport of dipeptides"
+ /codon_start=1
+ /transl_table=11
+ /product="dipeptide transporter ATP-binding subunit"
+ /protein_id="YP_001572941.1"
+ /db_xref="GI:161505829"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR010066"
+ /db_xref="InterPro:IPR013563"
+ /translation="MSTHEATLQQPLLRAIDLKKHYPVKKGIFSPERLVKALDGVSFT
+ LERGKTLAVVGESGCGKSTLGRLLTMIETPTGGELYYQGQDLLKHDPHAQKLRRQKIQ
+ IVFQNPYGSLNPRKKVGQILEEPLLINTSLSKAQRREKALAMMAKVGLKTEHYDRYPH
+ MFSGGQRQRIAIARGLMLDPDVVIADEPVSALDVSVRAQVLNLMMDLQQDMGLSYVFI
+ SHDLSVVEHIADEVMVMYLGRCVEKGTKEQIFNNPRHPYTQALLSATPRLNPDDRRER
+ IKLTGELPSPLNPPPGCAFNARCRRRFGPCTQLQPQLKEYGGQLVACFAVDQDENSQK
+ PAL"
+ misc_feature 3937212..3938183
+ /gene="dppF"
+ /locus_tag="SARI_04006"
+ /note="dipeptide transporter ATP-binding subunit;
+ Provisional; Region: dppF; PRK11308"
+ /db_xref="CDD:236898"
+ misc_feature 3937221..3937919
+ /gene="dppF"
+ /locus_tag="SARI_04006"
+ /note="ATP-binding cassette domain of nickel/oligopeptides
+ specific transporters; Region: ABC_NikE_OppD_transporters;
+ cd03257"
+ /db_xref="CDD:213224"
+ misc_feature 3937350..3937373
+ /gene="dppF"
+ /locus_tag="SARI_04006"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213224"
+ misc_feature order(3937359..3937364,3937368..3937376,3937503..3937505,
+ 3937743..3937748,3937845..3937847)
+ /gene="dppF"
+ /locus_tag="SARI_04006"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213224"
+ misc_feature 3937494..3937505
+ /gene="dppF"
+ /locus_tag="SARI_04006"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213224"
+ misc_feature 3937671..3937700
+ /gene="dppF"
+ /locus_tag="SARI_04006"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213224"
+ misc_feature 3937731..3937748
+ /gene="dppF"
+ /locus_tag="SARI_04006"
+ /note="Walker B; other site"
+ /db_xref="CDD:213224"
+ misc_feature 3937755..3937766
+ /gene="dppF"
+ /locus_tag="SARI_04006"
+ /note="D-loop; other site"
+ /db_xref="CDD:213224"
+ misc_feature 3937833..3937853
+ /gene="dppF"
+ /locus_tag="SARI_04006"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213224"
+ misc_feature 3937908..3938162
+ /gene="dppF"
+ /locus_tag="SARI_04006"
+ /note="oligopeptide/dipeptide ABC transporter, ATP-binding
+ protein, C-terminal domain; Region: oligo_HPY; TIGR01727"
+ /db_xref="CDD:213647"
+ gene complement(3938244..3939578)
+ /locus_tag="SARI_04007"
+ CDS complement(3938244..3939578)
+ /locus_tag="SARI_04007"
+ /inference="protein motif:ScanRegExp:IPR001220"
+ /inference="protein motif:ScanRegExp:IPR013838"
+ /inference="similar to AA sequence:INSD:CAC86203.1"
+ /note="'COG: COG0814 Amino acid permeases;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572942.1"
+ /db_xref="GI:161505830"
+ /db_xref="InterPro:IPR001220"
+ /db_xref="InterPro:IPR013838"
+ /translation="MRELRIFWAGGSMQDDTLPLNNSNATTTPLSTRLPFTKYDFGWV
+ LLCIGMAIGAGTVLMPVQIGLKGIWVFITAFIIAYPATYIVQDIYLKTLSESETCDDY
+ TDIISHYLGKNWGVFLGVIYFLMIIHGVFIYSLSVVFDSASYIKTFGLTETDLSQSII
+ YKVAIFAVLVAIASGGEKLLFKISGPMVVVKIGIILVFGFAMIPHWNFSNISAFPAAS
+ VFFRDVLLTIPFCFFSAVFIQVLNPMNIAYRKREPDRVQATRMAIRTHRISYITLIAI
+ ILFFSFSFTFSISHEEAVSAFEQNISALALAAQVIPGQIIHITSTILNIFAVLTAFFG
+ IYLGFHEALKGIVLNVLSRVMDIKNVNPRLLTSGICVFIVITLVIWVSFRVSVLVFFQ
+ LGSPLYGIVACIIPFFLIYKVTQLEKLRGLKTWLILLYGILLCLSPLLKLIE"
+ misc_feature complement(3938316..3939488)
+ /locus_tag="SARI_04007"
+ /note="Amino acid permeases [Amino acid transport and
+ metabolism]; Region: SdaC; COG0814"
+ /db_xref="CDD:223884"
+ misc_feature complement(3938316..3939473)
+ /locus_tag="SARI_04007"
+ /note="threonine/serine transporter TdcC; Provisional;
+ Region: PRK13629; cl17672"
+ /db_xref="CDD:248226"
+ gene complement(3939660..3939800)
+ /locus_tag="SARI_04008"
+ CDS complement(3939660..3939800)
+ /locus_tag="SARI_04008"
+ /inference="protein motif:HMMPfam:IPR000277"
+ /inference="similar to AA sequence:INSD:AAX67461.1"
+ /note="'KEGG: saz:Sama_1242 6.5e-07 meTHIonine gamma-lyase
+ K01761;
+ COG: COG0626 CystaTHIonine beta-lyases/cystaTHIonine
+ gamma-synthases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572943.1"
+ /db_xref="GI:161505831"
+ /db_xref="InterPro:IPR000277"
+ /translation="MTYSPVAPEEWLKAGITDELIRLSAGPEDPDDIIHDLERASRKA
+ AF"
+ misc_feature complement(3939666..>3939800)
+ /locus_tag="SARI_04008"
+ /note="Cystathionine beta-lyases/cystathionine
+ gamma-synthases [Amino acid transport and metabolism];
+ Region: MetC; COG0626"
+ /db_xref="CDD:223699"
+ misc_feature complement(3939681..>3939800)
+ /locus_tag="SARI_04008"
+ /note="Aspartate aminotransferase (AAT) superfamily (fold
+ type I) of pyridoxal phosphate (PLP)-dependent enzymes.
+ PLP combines with an alpha-amino acid to form a compound
+ called a Schiff base or aldimine intermediate, which
+ depending on the reaction, is the...; Region: AAT_I;
+ cl00321"
+ /db_xref="CDD:241782"
+ gene 3939897..3940091
+ /locus_tag="SARI_04009"
+ CDS 3939897..3940091
+ /locus_tag="SARI_04009"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572944.1"
+ /db_xref="GI:161505832"
+ /translation="MLNVFWQIKVVVCEASRRLQVSAVPGRVFYRNISSKPGVPGEAQ
+ CCGGLIPGGIGCWIEKTPAR"
+ gene complement(3940374..3942053)
+ /locus_tag="SARI_04010"
+ CDS complement(3940374..3942053)
+ /locus_tag="SARI_04010"
+ /note="'COG: NOG05994 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572945.1"
+ /db_xref="GI:161505833"
+ /translation="MTQHTQTPSMPSPLWQYWRGLSGWNFYFLVKFGLLWAGYLNFHP
+ LLNLVFMAFLLMPIPKYRLHRLRHWIAIPVGFALFWHDTWLPGPQSIMSQGTQVAEFS
+ SGYMLDLITRFINWQMIGAVFALLVAWLFLSQWVRVTVFVVVIMVWLNVLTLTGPVFT
+ LWPAGQPTDTVTTTGGNAAATVATAGDKPVIGDMPAQTAPPTTANLNAWLNTFYTAEA
+ KRKTTFPAQLPPDAQPFDLLVINICSLSWSDVEAAGLMSHPLWSHFDILFKHFNSGTS
+ YSGPAAIRLLRASCGQPSHTRLYQPADNECYLFDNLAKLGFTQHLMMDHNGEFGGFLK
+ EVRENGGMQSELMNQSGLPTALLSFDGSPVYDDLAVLNRWLAGEEREANSRSATFFNL
+ LPLHDGNHFPGVSKTADYKIRAQKLFDELDAFFTELEKSGRKVMVVVVPEHGGALKGD
+ RMQISGLRDIPSPSITNVPAGVKFFGMKAPHEGAPIDINQPSSYLAISELVVRAVDGK
+ LFTEDSVNWNKLTSNLPQTAPISENANAVVIQYQGKPYVRLNGGDWVPYPQ"
+ misc_feature complement(3940383..3941990)
+ /locus_tag="SARI_04010"
+ /note="cellulose synthase operon protein YhjU; Region:
+ cellulose_yhjU; TIGR03368"
+ /db_xref="CDD:132411"
+ gene complement(3942050..3942241)
+ /locus_tag="SARI_04011"
+ CDS complement(3942050..3942241)
+ /locus_tag="SARI_04011"
+ /inference="similar to AA sequence:INSD:AAO71369.1"
+ /note="'COG: NOG15366 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572946.1"
+ /db_xref="GI:161505834"
+ /translation="MMTISDIVQIILFCALIFFPLGYLARHSLRRISDTTRLLFAKPR
+ YVKPAGTLRRATKVKADKK"
+ misc_feature complement(3942053..3942238)
+ /locus_tag="SARI_04011"
+ /note="Protein of unknown function (DUF2636); Region:
+ DUF2636; pfam11120"
+ /db_xref="CDD:151564"
+ gene complement(3942238..3943809)
+ /locus_tag="SARI_04012"
+ CDS complement(3942238..3943809)
+ /locus_tag="SARI_04012"
+ /inference="similar to AA sequence:INSD:AAL22482.1"
+ /note="'KEGG: vfi:VFA0886 3.2e-27 zinc metalloprotease;
+ COG: NOG14695 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572947.1"
+ /db_xref="GI:161505835"
+ /translation="MRDTVDPVFSLGISSLWDELRHMPIGGVWWINVDRQQDAISLVN
+ QTIASQTENANVAVIGMAGNPGKVIKLDESHGPDKIRLFTMPVSEKGLYSLPHDLLCS
+ VNPTHYFFILICANNTWQNITSESLHKWLEKMNKWTRFHHCSLLVINPCNNSDKQSSL
+ LMGEYRSLFGLASLRFQGDQHLFDIAFWCNEKGVSARQQLLLCQQNERWTLSHQEETA
+ IQPRSDEKRILSHVAVLEGAPPLSEHWALFDNNEALFNNARMAQAATIIFSLTQNNQI
+ EPLARRIHTLRRQRGSALKIVVRENIASLRATDERLLLGCGANMIIPWNAPLSRCLTL
+ IESVQGQQFSRYVPEDITTLLSMTQPLKLRGFQPWDIFCDAVHTMMSNTLLPADGKGV
+ LVALRPVPGIRVEQALTLCRPNRTGDIMTIGGNRLVLFLSFCRVNDLDTALNHIFPLP
+ TGDIFSNRMVWFEDKQISAELVQMRLLSPELWGTPLPLAKRADPVINAEHDGRIWRRI
+ PEPLRLLDDTAERAS"
+ misc_feature complement(3942241..3943797)
+ /locus_tag="SARI_04012"
+ /note="cellulose biosynthesis protein BcsE; Provisional;
+ Region: PRK15045"
+ /db_xref="CDD:185005"
+ misc_feature complement(3942388..3943326)
+ /locus_tag="SARI_04012"
+ /note="Protein of unknown function (DUF2819); Region:
+ DUF2819; pfam10995"
+ /db_xref="CDD:220931"
+ gene 3944054..3944242
+ /locus_tag="SARI_04013"
+ CDS 3944054..3944242
+ /locus_tag="SARI_04013"
+ /inference="similar to AA sequence:REFSEQ:NP_458299.1"
+ /note="'COG: NOG13865 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572948.1"
+ /db_xref="GI:161505836"
+ /translation="MYNNEPGAQSDPTLGYTFQNDFLALSQAFSLPEIDYTDISQREQ
+ LATAIKRWPLLAEFAQQH"
+ misc_feature 3944102..3944233
+ /locus_tag="SARI_04013"
+ /note="Protein of unknown function (DUF2629); Region:
+ DUF2629; pfam10945"
+ /db_xref="CDD:151392"
+ gene 3944254..3945006
+ /locus_tag="SARI_04014"
+ CDS 3944254..3945006
+ /locus_tag="SARI_04014"
+ /inference="protein motif:HMMPfam:IPR009504"
+ /inference="similar to AA sequence:REFSEQ:YP_152596.1"
+ /note="'COG: COG1192 ATPases involved in chromosome
+ partitioning;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="cell division protein"
+ /protein_id="YP_001572949.1"
+ /db_xref="GI:161505837"
+ /db_xref="InterPro:IPR009504"
+ /translation="MAILGLQGVRGGVGTTSITSALAWALQILGENVLVIDASPDNLL
+ RMSFNVDFVHQGGWARSLLDGQDWRDAGLRYTSQLDLLPFGQLTAKERENPQAWQETL
+ GEIGSAIQALKASRRYSWILLDLPYGASPLTRQLVSLCDHTLAIARVDANCHIRLHQQ
+ ALPAGAHILINDLRIGSQLQDDLYQVWLQSQRRLLPVVIHRDEAMAECMASKQPLGEY
+ RSDSLAAEEVLTLANWCLLHDAGDKTSAGSPL"
+ misc_feature 3944254..3945000
+ /locus_tag="SARI_04014"
+ /note="cell division protein; Provisional; Region:
+ PRK10037"
+ /db_xref="CDD:182204"
+ misc_feature 3944260..>3944382
+ /locus_tag="SARI_04014"
+ /note="The Fer4_NifH superfamily contains a variety of
+ proteins which share a common ATP-binding domain.
+ Functionally, proteins in this superfamily use the energy
+ from hydrolysis of NTP to transfer electron or ion;
+ Region: Fer4_NifH; cl17203"
+ /db_xref="CDD:247757"
+ gene 3945003..3947627
+ /gene="bcsA"
+ /locus_tag="SARI_04015"
+ CDS 3945003..3947627
+ /gene="bcsA"
+ /locus_tag="SARI_04015"
+ /inference="protein motif:HMMPfam:IPR001173"
+ /inference="protein motif:HMMPfam:IPR009875"
+ /note="'polymerizes uridine 5'-diphosphate glucose to
+ cellulose; acts with BcsB, BcsZ and BcsC in cellulose
+ biosynthesis'"
+ /codon_start=1
+ /transl_table=11
+ /product="cellulose synthase catalytic subunit"
+ /protein_id="YP_001572950.1"
+ /db_xref="GI:161505838"
+ /db_xref="InterPro:IPR001173"
+ /db_xref="InterPro:IPR009875"
+ /translation="MSALSRWLLIPPVSARLSERYQGYRRHGASPFSAALGCLWTILA
+ WIVFPLEHPRWQRIRAGHKALYPHINAARPRPLDPARYLIQTLWLVMISSAKERHEPR
+ WRSFARLQGVRGRYHQWMDTLPERVRQKTTHLEKEKELGHLSNGVRRFILGVIVTFSL
+ ILALICITQPFNPLSQFIFLVLLWGVALLVRRMPGRFSALMLIVLSLTVSCRYIWWRY
+ TSTLNWDDPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQPVPLPKEMSQWPTVD
+ IFVPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGRESFRQFARHVGVHYIARA
+ THEHAKAGNINNALKHAKGEFVAIFDCDHVPTRSFLQMTMGWFLKEKQLAMMQTPHHF
+ FSPDPFERNLGRFRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPLDEIGGIA
+ VETVTEDAHTSLRLHRRGYTSAYMRIPQAAGLATESLSAHIGQRIRWARGMVQIFRLD
+ NPLFGKGLKLAQRLCYLNAMFHFLSGIPRLIFLTAPLAFLLLHAYIIYAPALMIALFV
+ LPHMIHASLTNSKIQGKYRHSFWSEIYETVLAWYIAPPTLVALINPHKGKFNVTAKGG
+ LVEEKYVDWVISRPYIFLVLLNLLGVAAGVWRYYYGPENETLTVIVSLVWVFYNLVIL
+ GGAVAVSVESKQVRRAHRVEIAMPGAIAREDGHLFSCTVHDFSDGGLGIKINGQAQVL
+ EGQKVNLLLKRGQQEYVFPTQVVRVTGNEVGLQLMPLTTKQHIDFVQCTFARADTWAL
+ WQDSFPEDKPLESLLDILKLGFRGYRHLAEFAPPSVKVIFRSLTALIAWIVSFIPRRP
+ ERQAAIQPSDRVMAQAQQ"
+ misc_feature 3945042..3947597
+ /gene="bcsA"
+ /locus_tag="SARI_04015"
+ /note="cellulose synthase catalytic subunit; Provisional;
+ Region: bcsA; PRK11498"
+ /db_xref="CDD:236918"
+ misc_feature 3945552..>3946034
+ /gene="bcsA"
+ /locus_tag="SARI_04015"
+ /note="Glycosyltransferase family A (GT-A) includes
+ diverse families of glycosyl transferases with a common
+ GT-A type structural fold; Region: Glyco_tranf_GTA_type;
+ cl11394"
+ /db_xref="CDD:245596"
+ misc_feature 3945819..3946517
+ /gene="bcsA"
+ /locus_tag="SARI_04015"
+ /note="CESA_CelA_like are involved in the elongation of
+ the glucan chain of cellulose; Region: CESA_CelA_like;
+ cd06421"
+ /db_xref="CDD:133043"
+ misc_feature 3946080..3946088
+ /gene="bcsA"
+ /locus_tag="SARI_04015"
+ /note="DXD motif; other site"
+ /db_xref="CDD:133043"
+ misc_feature <3946488..>3946652
+ /gene="bcsA"
+ /locus_tag="SARI_04015"
+ /note="Glycosyltransferase family A (GT-A) includes
+ diverse families of glycosyl transferases with a common
+ GT-A type structural fold; Region: Glyco_tranf_GTA_type;
+ cl11394"
+ /db_xref="CDD:245596"
+ misc_feature 3947082..3947375
+ /gene="bcsA"
+ /locus_tag="SARI_04015"
+ /note="PilZ domain; Region: PilZ; pfam07238"
+ /db_xref="CDD:219344"
+ gene 3947638..3949932
+ /locus_tag="SARI_04016"
+ CDS 3947638..3949932
+ /locus_tag="SARI_04016"
+ /inference="protein motif:FPrintScan:IPR003920"
+ /inference="protein motif:HMMPfam:IPR003920"
+ /note="'binds the cellulose synthase activator,
+ bis-(3'-5') cyclic diguanylic acid (c-di-GMP)'"
+ /codon_start=1
+ /transl_table=11
+ /product="cellulose synthase regulator protein"
+ /protein_id="YP_001572951.1"
+ /db_xref="GI:161505839"
+ /db_xref="InterPro:IPR003920"
+ /translation="MKRKLSWICAAVIGLSAFPAFMTAAAPATPPLINAEPTEPAPAN
+ QAPVVAQTAPSREVKLTFAQIAPPPGSMALRGVNPNGGIEFGMRSDEVASKAVLNLEY
+ TPSPSLLPVQSQLKVYLNDELMGVLPVTKEQLGKKTLAQVPINPLFITDFNRVRLEFV
+ GHYRDVCENPASSTLWLDIGRNSALDLTYSMLAVNNDLSHFPVPFFDPRDNRPVTLPM
+ VFADVPDLAQQQAASIVASWFGSRAGWRGQRFPVLYNHLPDRNAIVFATNDRRPDFLR
+ DHPAVNAPVIEMMSHPDNPYVKLLVVFGRDDKDLLQAAKGIAQGNILFRGSSVVVNDV
+ KPLLARKPYDAPNWVRTDRPVTFGELKTYEEQLQSSGLEPAPINVSLNLPPDLYLLRS
+ NGIDMDLNYRYTSPPTKDSSRLDISLNNQFLQAFSLSSTQETNRLLLRLPVLQGLLDG
+ KTDVSIPALKLGAMNQLRFDFQYMNPMPGGSVDNCITFQPVQNHVVIGDDSTIDFSKY
+ YHFIAMPDLRAFANAGFPFSRMADLSDTLAVMPKTPTEAQMETLLNTVGAIGGQTGFP
+ AINLTITDDSAQIADKDADLLIIGAIPDKLKDDKRIDLLVQATQSWVKTPMRQTAFPP
+ IMPDEADRAADAQSTVTASGPMAAVVGFQSPFNDQRSVIALLADSPRGYQLLNDAVND
+ SGKRAAMFGSVAVIRESGVHSLRVGDIYYVGHLPWFERLWYALANHPVLLAVLAALSV
+ VLLAWVLWRLLRILSRRRLDPDHE"
+ misc_feature 3947638..3949806
+ /locus_tag="SARI_04016"
+ /note="cellulose synthase regulator protein; Provisional;
+ Region: PRK11114"
+ /db_xref="CDD:236851"
+ gene 3949936..3951045
+ /locus_tag="SARI_04017"
+ CDS 3949936..3951045
+ /locus_tag="SARI_04017"
+ /inference="protein motif:FPrintScan:IPR002037"
+ /inference="protein motif:Gene3D:IPR012341"
+ /inference="protein motif:HMMPfam:IPR002037"
+ /inference="protein motif:ScanRegExp:IPR002037"
+ /inference="protein motif:superfamily:IPR008928"
+ /inference="similar to AA sequence:REFSEQ:YP_152594.1"
+ /note="'catalyzes the hydrolysis of 1,4-beta-D-glucosidic
+ linkages in cellulose, lichenin and cereal
+ beta-D-glucans'"
+ /codon_start=1
+ /transl_table=11
+ /product="endo-1,4-D-glucanase"
+ /protein_id="YP_001572952.1"
+ /db_xref="GI:161505840"
+ /db_xref="InterPro:IPR002037"
+ /db_xref="InterPro:IPR008928"
+ /db_xref="InterPro:IPR012341"
+ /translation="MMTMLRGWITMIVMLTAINAQAACSWPAWEQFKKDYISQQGRVI
+ DPGDARKITTSEGQSYAMFFALAANDRPAFAQLFNWTQNNLAQGSLREHLPAWLWGQK
+ DPDTWSVLDSNSASDGDIWMAWSLLEAGRLWKETRYTEVGTALLKRIAREEVVNVPGL
+ GSMLLPGKIGFAEANSWRFNPSYLPPQLAQYFSRFGAPWSTLRETNLRLLLETAPKGF
+ SPDWVRYERKQGWQLKAEKTLISSYDAIRVYLWAGMMHDGDPQKARLLAKFKPMATLT
+ MKNGVPPEKVDVASGNAQGTGPVGFSAALLPFLQNRDAQAVQRQRVADHFPGSDAYYN
+ YVLTLFGQGWDQHRFRFTVKGELLPDWGQECVSSR"
+ misc_feature 3949939..3951042
+ /locus_tag="SARI_04017"
+ /note="endo-1,4-D-glucanase; Provisional; Region:
+ PRK11097"
+ /db_xref="CDD:236844"
+ gene 3951051..3954569
+ /locus_tag="SARI_04018"
+ CDS 3951051..3954569
+ /locus_tag="SARI_04018"
+ /inference="protein motif:Gene3D:IPR011990"
+ /inference="protein motif:HMMPfam:IPR008410"
+ /inference="protein motif:HMMPfam:IPR013105"
+ /inference="protein motif:HMMSmart:IPR013026"
+ /inference="protein motif:superfamily:IPR008940"
+ /note="'cellulose is produced by the multicellular
+ morphotypes of E. coli and Salmonella typhimurium; the
+ cellulose biosynthesis genes bcsA, bcsB, bcsZ and bcsC are
+ constitutively transcribed, however, cellulose synthesis
+ is dependent on the expression of adrA'"
+ /codon_start=1
+ /transl_table=11
+ /product="cellulose synthase subunit BcsC"
+ /protein_id="YP_001572953.1"
+ /db_xref="GI:161505841"
+ /db_xref="InterPro:IPR008410"
+ /db_xref="InterPro:IPR008940"
+ /db_xref="InterPro:IPR011990"
+ /db_xref="InterPro:IPR013026"
+ /db_xref="InterPro:IPR013105"
+ /translation="MQLFLPDGGRNALPGKRGVYRALLGLSLGIALTPLAGAATSAQQ
+ QLLEQVRLGEATHREDLVRQSLYRLELIDPNDPQVIAARFRYLLRQGDSDGAQKLLDR
+ LAQLAPESTAYQSSRTAMLLSTPQGRQSLQEARLLATTGHTEQAIARYDKLFKGYPPE
+ GELAVEYWTTVAKLPARRHEAIKQLQKINAVSPGNNALQNALAQLLFASGRRDEGFAV
+ LKQMAKSSTGRSAASAIWYQQIKDLPVSDASVKALQDYLTQFSEGDSVSAARAQLSEQ
+ QKQLADPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDR
+ ARAVAQFEKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQA
+ RAVDNTDSYAVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQ
+ KAAAFIASLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPG
+ SVWVTYRLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAH
+ LNTLPTSQWNSNIQELAGRLQSNLVLESANRLRDSGKEREAEALLRQQPPSTRIALTL
+ ADWAQQRGDNAAARAAYDAVLAREPGNVDAMLGRLEIDIAQGDNAAARAQLAALPASQ
+ ITSINMQRRVALAQLQLGDITAAARTFNRITPQAKAQPPSMESAMVLRDAAAFQAQTG
+ EPQRALETYKDAMVAAAITPVRPQNNDTFTRLTRNDEKDVWLKRGVRSDAAELYRQQD
+ LNVTLAHDYWGSSGTGGYSDLKAHTTMLQVDAPWSDGRAFFRTDMVNMDVGRFSTDAD
+ GKYDNNWGTCTLEKCSGHRSQADTGASVAVGWQNETWRWDIGTTPMGFNVVDVVGGVS
+ YSDDIGPLGYTLNAHRRPLSSSLLAFGGQKDASSNTGTKWGGVRANGGGVSLSYDKGE
+ ANGVWASLSGDQLSGKNVEDNWRVRWMTGYYYKVINENNRRVTVGLNNMIWHYDKDLS
+ GYSLGQGGYYSPQEYLSFAVPVMWRQRTENWSWELGGSVSWSHSRTRTMPRYPLMNLI
+ PADYQEDARDQTNGGGSSQGFGYTARALIERRVTANWFIGTAVDIQQAKDYTPSHLLL
+ YVRYSAAGWQGDMDLPPQPLVPYADW"
+ misc_feature 3951117..3954566
+ /locus_tag="SARI_04018"
+ /note="cellulose synthase subunit BcsC; Provisional;
+ Region: PRK11447"
+ /db_xref="CDD:183140"
+ misc_feature <3951921..3952100
+ /locus_tag="SARI_04018"
+ /note="Tetratricopeptide repeat domain; typically contains
+ 34 amino acids
+ [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
+ X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
+ a variety of organisms including bacteria, cyanobacteria,
+ yeast, fungi; Region: TPR; cl02429"
+ /db_xref="CDD:243034"
+ misc_feature order(3951921..3951923,3951957..3951959,3951969..3951971,
+ 3951978..3951980,3952023..3952025,3952059..3952061,
+ 3952071..3952073,3952080..3952082)
+ /locus_tag="SARI_04018"
+ /note="TPR motif; other site"
+ /db_xref="CDD:238112"
+ misc_feature order(3951921..3951926,3951933..3951938,3952014..3952019,
+ 3952026..3952031,3952038..3952043)
+ /locus_tag="SARI_04018"
+ /note="binding surface"
+ /db_xref="CDD:238112"
+ misc_feature 3952020..3952343
+ /locus_tag="SARI_04018"
+ /note="Tetratricopeptide repeat domain; typically contains
+ 34 amino acids
+ [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
+ X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
+ a variety of organisms including bacteria, cyanobacteria,
+ yeast, fungi; Region: TPR; cd00189"
+ /db_xref="CDD:238112"
+ misc_feature order(3952023..3952025,3952059..3952061,3952071..3952073,
+ 3952080..3952082,3952146..3952148,3952203..3952205,
+ 3952215..3952217,3952224..3952226,3952269..3952271,
+ 3952305..3952307,3952317..3952319,3952326..3952328)
+ /locus_tag="SARI_04018"
+ /note="TPR motif; other site"
+ /db_xref="CDD:238112"
+ misc_feature order(3952026..3952031,3952137..3952142,3952146..3952151,
+ 3952158..3952163,3952260..3952265,3952272..3952277,
+ 3952284..3952289)
+ /locus_tag="SARI_04018"
+ /note="binding surface"
+ /db_xref="CDD:238112"
+ misc_feature 3952251..3952571
+ /locus_tag="SARI_04018"
+ /note="Tetratricopeptide repeat domain; typically contains
+ 34 amino acids
+ [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
+ X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
+ a variety of organisms including bacteria, cyanobacteria,
+ yeast, fungi; Region: TPR; cd00189"
+ /db_xref="CDD:238112"
+ misc_feature order(3952251..3952256,3952260..3952265,3952272..3952277,
+ 3952362..3952367,3952371..3952376,3952383..3952388,
+ 3952488..3952493,3952500..3952505,3952512..3952517)
+ /locus_tag="SARI_04018"
+ /note="binding surface"
+ /db_xref="CDD:238112"
+ misc_feature order(3952269..3952271,3952305..3952307,3952317..3952319,
+ 3952326..3952328,3952371..3952373,3952407..3952409,
+ 3952458..3952460,3952467..3952469,3952497..3952499,
+ 3952533..3952535,3952545..3952547,3952554..3952556)
+ /locus_tag="SARI_04018"
+ /note="TPR motif; other site"
+ /db_xref="CDD:238112"
+ misc_feature 3953496..3954515
+ /locus_tag="SARI_04018"
+ /note="Cellulose synthase operon protein C C-terminus
+ (BCSC_C); Region: BCSC_C; pfam05420"
+ /db_xref="CDD:218583"
+ gene 3954762..3956735
+ /locus_tag="SARI_04019"
+ CDS 3954762..3956735
+ /locus_tag="SARI_04019"
+ /inference="protein motif:HMMPfam:IPR000160"
+ /inference="protein motif:HMMPfam:IPR001633"
+ /inference="protein motif:HMMPfam:IPR003660"
+ /inference="protein motif:HMMSmart:IPR000160"
+ /inference="protein motif:HMMSmart:IPR001633"
+ /inference="protein motif:HMMTigr:IPR000160"
+ /note="HmsP in Yersinia pestis plays a role in invasion of
+ epithelial cells; the EAL-domain portion of HmsP from Y.
+ pestis shows phosphodiesterase activity which is required
+ for the inhibition of biofilm formation; inner membrane
+ protein; similar to a putative phosphodiesterase protein
+ from E. coli"
+ /codon_start=1
+ /transl_table=11
+ /product="putative phosphodiesterase"
+ /protein_id="YP_001572954.1"
+ /db_xref="GI:161505842"
+ /db_xref="InterPro:IPR000160"
+ /db_xref="InterPro:IPR001633"
+ /db_xref="InterPro:IPR003660"
+ /translation="MAMVAAVVMVFIFVFCTVLLFHLVQQNRYNTATQLESIARSVRE
+ PLSSAILKADLPGAETILESIKPAGVVSRADVVLPNQFQALRKRFIPERPVPVMVTRL
+ FELPVQISLPVYSLERPANPQPLAYLVLQADSYRMYKFVMSALSTLVTIYLLLSLMLT
+ VAIAWCVNRLIVHPLRKIARELNDIPQQELIGHQLALPRLHQDDEIGMLVRSYNLNQQ
+ LMQRQSAEQTDNAMRFPVSDLPNKAFLMGLLEQVATRQQTTALIIVTCETLRDTAGVL
+ KETQREILLLTLVEKLKSVLAPRMVLTQVSGYDFAIIAHGVKEPWHAITLGQQILTII
+ NERLPIQRIQLRPSCSIGIAMYYGDLTAEQLYGRAVSAAFTARRKGKNQIQFFDPAQM
+ EAAQQRLTEESDILTALDNHQFAIWLQPQVGMRGGNVLSAEALLRMQQPDGSWELPEG
+ LIERIESCGLMVTVGYWVLEESCRLLAAWQERGVILPLSVNLSALQLMHPGMVSELLE
+ LLSRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRIALDDFGMGYAGLRQLQ
+ HMKSLPVDILKIDKMFVDGLPDDHNMVTAIILMARSLNLQLIAEGVENEAQRAWLEQA
+ GVDVAQGFLFARPVPADLFEERYLPHVNPDYKS"
+ misc_feature 3954807..3956711
+ /locus_tag="SARI_04019"
+ /note="putative diguanylate cyclase; Provisional; Region:
+ PRK13561"
+ /db_xref="CDD:184143"
+ misc_feature 3955212..3955403
+ /locus_tag="SARI_04019"
+ /note="HAMP domain; Region: HAMP; pfam00672"
+ /db_xref="CDD:216054"
+ misc_feature <3955611..3955916
+ /locus_tag="SARI_04019"
+ /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region:
+ GGDEF; cd01949"
+ /db_xref="CDD:143635"
+ misc_feature order(3955659..3955661,3955746..3955748)
+ /locus_tag="SARI_04019"
+ /note="I-site; other site"
+ /db_xref="CDD:143635"
+ misc_feature order(3955671..3955673,3955677..3955688)
+ /locus_tag="SARI_04019"
+ /note="active site"
+ /db_xref="CDD:143635"
+ misc_feature 3955683..3955685
+ /locus_tag="SARI_04019"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:143635"
+ misc_feature 3955968..3956684
+ /locus_tag="SARI_04019"
+ /note="EAL domain. This domain is found in diverse
+ bacterial signaling proteins. It is called EAL after its
+ conserved residues and is also known as domain of unknown
+ function 2 (DUF2). The EAL domain has been shown to
+ stimulate degradation of a second...; Region: EAL;
+ cd01948"
+ /db_xref="CDD:238923"
+ gene 3956893..3958179
+ /locus_tag="SARI_04020"
+ CDS 3956893..3958179
+ /locus_tag="SARI_04020"
+ /inference="protein motif:FPrintScan:IPR001991"
+ /inference="protein motif:HMMPfam:IPR001991"
+ /inference="protein motif:ScanRegExp:IPR001991"
+ /inference="similar to AA sequence:INSD:AAL22474.1"
+ /note="involved in the transport of C4-dicarboxylates
+ across the membrane"
+ /codon_start=1
+ /transl_table=11
+ /product="C4-dicarboxylate transporter DctA"
+ /protein_id="YP_001572955.1"
+ /db_xref="GI:161505843"
+ /db_xref="InterPro:IPR001991"
+ /translation="MKTSLFKSLYFQVLTAIAIGILLGHYYPELGAQMKPLGDAFVKL
+ IKMIIAPVIFCTVVTGIAGMESMKAVGRTGAVALLYFEIVSTIALIIGLIIVNVVQPG
+ AGMNVDPATLDAQAVAVYAAQAKEQGIIAFLMDIIPGSVIGAFASGNILQVLLFAVLF
+ GFALHRLGSKGQLIFNVIESFSQVIFGIINMIMRLAPIGAFGAMAFTIGKYGVGSLVQ
+ LGQLIICFYITCILFVVVVLGTIARVTGFSIFKFIRYIREELLIVLGTSSSESALPRM
+ LDKMEKLGCRKSVVGLVIPTGYSFNLDGTSIYLTMAAVFIAQATNSHMDIFHQITLLV
+ VLLLSSKGAAGVTGSGFIVLAATISAVGHLPVAGLALILGIDRFMSEARALTNLVGNG
+ VATVVVAKWVKELDRQKLDDVLNNRAPDGKTHEISS"
+ misc_feature 3956893..3958173
+ /locus_tag="SARI_04020"
+ /note="C4-dicarboxylate transporter DctA; Reviewed;
+ Region: PRK01663"
+ /db_xref="CDD:234968"
+ misc_feature 3956896..3958152
+ /locus_tag="SARI_04020"
+ /note="Na+/H+-dicarboxylate symporters [Energy production
+ and conversion]; Region: GltP; COG1301"
+ /db_xref="CDD:224220"
+ gene 3958400..3959887
+ /locus_tag="SARI_04021"
+ CDS 3958400..3959887
+ /locus_tag="SARI_04021"
+ /inference="protein motif:HMMPfam:IPR007863"
+ /inference="similar to AA sequence:INSD:AAV79278.1"
+ /note="'KEGG: eci:UTI89_C4059 5.0e-233 yhjJ; protein YhjJ
+ precursor K01412;
+ COG: COG0612 Predicted Zn-dependent peptidases;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572956.1"
+ /db_xref="GI:161505844"
+ /db_xref="InterPro:IPR007863"
+ /translation="MQGTKIRLLAGSLLILASAGYVQADALQPDPAWQQGTLANGLHW
+ QVLATPQRPSDRIEVRLQVNTGSLTESTQQSGFSHAIPRIALTQSGGLDAAQARSLWQ
+ QGVDPKRPMPPVIVSYDSTLYNLSLPNNRNDLLKEALTYLANISGKLTITPVTVNHAL
+ SSEDMVATWPADTKEGWWRYRLKGSALLGHDPAEPLKQPVDAAKIQSFYEKWYTPDAM
+ TLIIVGNIDARSVAEQINKTFGTLKGKRETPAPVPTLSPLRAESVSIMTDAVRQDRLS
+ IMWDTPWQPIRESAALLRYWQADLAREALFWHIQQELTKNNAKDIGLGFDCRVLFLRA
+ QCAINIESPNDKLNNNLSLVANELAKVRDKGLSEEEFTALVAQKNLELQKLFATYART
+ DTNILIGQRMRSLQNQVVDIAPEQYQKLRQNFLNRLTVDMLNQNLRQQLSQEMALILL
+ QPQGEPEFNMKALKATWDEIMAPATAAAVETDEAHPEVSDIPTAQ"
+ misc_feature 3958463..3959833
+ /locus_tag="SARI_04021"
+ /note="Predicted Zn-dependent peptidases [General function
+ prediction only]; Region: PqqL; COG0612"
+ /db_xref="CDD:223685"
+ misc_feature 3958997..3959530
+ /locus_tag="SARI_04021"
+ /note="Peptidase M16 inactive domain; Region:
+ Peptidase_M16_C; pfam05193"
+ /db_xref="CDD:218490"
+ gene complement(3959939..3960868)
+ /locus_tag="SARI_04022"
+ CDS complement(3959939..3960868)
+ /locus_tag="SARI_04022"
+ /inference="protein motif:HMMPfam:IPR011611"
+ /inference="protein motif:ScanRegExp:IPR002173"
+ /inference="similar to AA sequence:REFSEQ:NP_458307.1"
+ /note="'KEGG: stt:t3905 2.7e-154 kdgK;
+ 2-dehydro-3-deoxygluconokinase K00874;
+ COG: COG0524 Sugar kinases, ribokinase family;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572957.1"
+ /db_xref="GI:161505845"
+ /db_xref="InterPro:IPR002173"
+ /db_xref="InterPro:IPR011611"
+ /translation="MSKKIAVIGECMIELSQKGADVQRGFGGDTLNTSVYIARQVDSA
+ ALTVHYVTALGTDSFSQQMLDSWQGENVDISLTQRMENRLPGLYYIETDDTGERNFYY
+ WRNEAAAKFWLESEQTAAICKALASFDYLYLSGISLAILSPASRDKLLSLLRECRANG
+ GKVIFDNNYRPRLWTSREETQQVYQKMLECTDIAFLTLDDEDALWGKKPVEEVIARTH
+ TAGVHEVVVKRGADSCLVSTQGEALVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLT
+ GGSAADAAKRGHLTASTVIQFRGAIIPHDAMPQ"
+ misc_feature complement(3959957..3960859)
+ /locus_tag="SARI_04022"
+ /note="Sugar kinases, ribokinase family [Carbohydrate
+ transport and metabolism]; Region: RbsK; COG0524"
+ /db_xref="CDD:223598"
+ misc_feature complement(3959966..3960859)
+ /locus_tag="SARI_04022"
+ /note="2-keto-3-deoxygluconate kinase (KdgK)
+ phosphorylates 2-keto-3-deoxygluconate (KDG) to form
+ 2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the
+ common intermediate product, that allows organisms to
+ channel D-glucuronate and/or D-galacturinate into the...;
+ Region: KdgK; cd01166"
+ /db_xref="CDD:238571"
+ misc_feature complement(order(3959969..3959971,3960077..3960079,
+ 3960086..3960088,3960359..3960361,3960461..3960463,
+ 3960557..3960559,3960563..3960565,3960605..3960607,
+ 3960773..3960775,3960782..3960787))
+ /locus_tag="SARI_04022"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:238571"
+ misc_feature complement(order(3959993..3959995,3960005..3960007,
+ 3960071..3960073,3960080..3960088,3960113..3960115,
+ 3960170..3960172,3960185..3960187))
+ /locus_tag="SARI_04022"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238571"
+ gene 3961096..3961863
+ /locus_tag="SARI_04023"
+ CDS 3961096..3961863
+ /locus_tag="SARI_04023"
+ /inference="protein motif:HMMPfam:IPR001633"
+ /inference="protein motif:HMMSmart:IPR001633"
+ /inference="similar to AA sequence:INSD:AAL22471.1"
+ /note="in Escherichia coli this protein is involved in
+ flagellar function"
+ /codon_start=1
+ /transl_table=11
+ /product="EAL domain-containing protein"
+ /protein_id="YP_001572958.1"
+ /db_xref="GI:161505846"
+ /db_xref="InterPro:IPR001633"
+ /translation="MIKQVIQQLSVPNAGIENLQERRYWLQCERAYTYQPIYQTNGRL
+ MAVELLTIVTHPDNPSRRIAPDRYFAELAVQHRIEVVKEQLHQLEQKTDFFTRHHLLA
+ SVNVDGPTLIAMRRQPDILETMERLPWLRFELVEHIRLPKDSSFASMCEFGPLWLDDF
+ GTGMANFSALSEVRYDYIKVARDLFVMLRQTPEGRNLFILLLQLMNRYCRGIIVEGVE
+ TLEEWRDVQRSPAFAAQGYFLSRPVPLISLEEVILTL"
+ misc_feature 3961195..3961830
+ /locus_tag="SARI_04023"
+ /note="EAL domain. This domain is found in diverse
+ bacterial signaling proteins. It is called EAL after its
+ conserved residues and is also known as domain of unknown
+ function 2 (DUF2). The EAL domain has been shown to
+ stimulate degradation of a second...; Region: EAL;
+ cd01948"
+ /db_xref="CDD:238923"
+ gene 3961974..3964034
+ /locus_tag="SARI_04024"
+ CDS 3961974..3964034
+ /locus_tag="SARI_04024"
+ /inference="protein motif:HMMPfam:IPR007844"
+ /note="'COG: COG2982 Uncharacterized protein involved in
+ outer membrane biogenesis;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572959.1"
+ /db_xref="GI:161505847"
+ /db_xref="InterPro:IPR007844"
+ /translation="MTKAGKITAAITGTFLLLIVIVIVLIATFDWNRLKPTINQKVST
+ ELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRV
+ EATIAPLALLTKTVWLPWIKLVQPDARLIRLSGKTNNWTFNLAQDENLDPNAKPSAWS
+ FRLDNILFDQGRIAFDDKVSKADITILIDPLGKPLPFSEVTGTKGKEDKTSVGDYVFG
+ LKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSGVVNEPMKMGG
+ VDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFDYRGFNGRIGD
+ SDIHGSLTYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSGKGAEQSKRSEQRKGEKN
+ VQPADKVLPYDRFETDKWDVMDADVRFKGRRIEHGGSLPISDLSTHIILKNADLRLKP
+ LKFGLAGGSIVSNIHLEGNKKPMQGRADIQARRLKLKELMPDVELMQKTLGELNGDAD
+ IRGTGNSVAALLGNSNGNLKLLMNDGLISRNLMEIVGLNVGNYIVGQIFGDDEVRVNC
+ AAANLNIANGVARPQLFAFDTENALINVTGTASFASEQIDLTIDPESKGIRIITLRSP
+ LYVRGTFKNPQAGVKPGPLIARGAVAAALATLVTPAAALLALISPSEGEANQCRTILT
+ QMKQ"
+ misc_feature 3961974..3963893
+ /locus_tag="SARI_04024"
+ /note="Uncharacterized protein involved in outer membrane
+ biogenesis [Cell envelope biogenesis, outer membrane];
+ Region: AsmA; COG2982"
+ /db_xref="CDD:225529"
+ misc_feature 3963267..3963878
+ /locus_tag="SARI_04024"
+ /note="AsmA-like C-terminal region; Region: AsmA_2;
+ pfam13502"
+ /db_xref="CDD:222180"
+ gene 3964041..3964169
+ /locus_tag="SARI_04025"
+ CDS 3964041..3964169
+ /locus_tag="SARI_04025"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572960.1"
+ /db_xref="GI:161505848"
+ /translation="MYRWMATQSVLSGLRNARIVGRINVARFGNALLQRLMTRLMG"
+ gene complement(3964137..3965459)
+ /locus_tag="SARI_04026"
+ CDS complement(3964137..3965459)
+ /locus_tag="SARI_04026"
+ /inference="protein motif:HMMPfam:IPR005828"
+ /inference="protein motif:HMMTigr:IPR004736"
+ /inference="protein motif:ScanRegExp:IPR000911"
+ /inference="similar to AA sequence:INSD:AAL22469.1"
+ /note="'KEGG: cal:orf19.2425 7.5e-05 highly conserved
+ hypothetical protein K01804;
+ COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572961.1"
+ /db_xref="GI:161505849"
+ /db_xref="InterPro:IPR000911"
+ /db_xref="InterPro:IPR004736"
+ /db_xref="InterPro:IPR005828"
+ /translation="MQATATTLDHEQKHVPVNSRNKVLIASLIGTAIEFFDFYIYATA
+ AVIVFPHIFFPQGDPTAATLQSLATFAIAFVARPIGSALFGHFGDRIGRKVTLVASLL
+ TMGISTVIIGVLPGYATMGIFAPLLLALARFGQGLGLGGEWGGAALLATENAPPRKRA
+ LYGSFPQLGAPIGFFFANGTFLLLSWLLTDEQFMSWGWRVPFIFSAVLVIIGLYVRVS
+ LHETPVFAKVAAAKKQVKIPLGTLLTKHVRVTILGTFIMLATYTLFYIMTVYSMTYST
+ AAAPVGLGLPRNEILWMLMMAVIGFGVMVPVAGLLADAFGRQKSMVIITTLIILFALF
+ AFTPLLGSGNPALVFLFLLLGLSLMGLTFGPMGALLPELFPTEVRYTGASFSYNVSSI
+ LGASVAPYIATWLQSHYGLAAVGVYLASMAALTLIALLLTHETRHQSL"
+ misc_feature complement(3964218..3965390)
+ /locus_tag="SARI_04026"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature complement(3964209..3965372)
+ /locus_tag="SARI_04026"
+ /note="metabolite-proton symporter; Region: 2A0106;
+ TIGR00883"
+ /db_xref="CDD:233168"
+ misc_feature complement(order(3964275..3964277,3964287..3964292,
+ 3964299..3964304,3964311..3964316,3964347..3964349,
+ 3964356..3964361,3964371..3964373,3964380..3964385,
+ 3964392..3964394,3964545..3964547,3964557..3964559,
+ 3964566..3964568,3964578..3964580,3964590..3964592,
+ 3964644..3964646,3964653..3964658,3964665..3964670,
+ 3964677..3964679,3964938..3964940,3964956..3964961,
+ 3964968..3964973,3965007..3965009,3965016..3965021,
+ 3965028..3965033,3965040..3965045,3965205..3965210,
+ 3965214..3965219,3965229..3965231,3965238..3965243,
+ 3965250..3965252,3965322..3965327,3965331..3965339,
+ 3965346..3965348))
+ /locus_tag="SARI_04026"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene complement(3965765..3966793)
+ /locus_tag="SARI_04028"
+ CDS complement(3965765..3966793)
+ /locus_tag="SARI_04028"
+ /inference="protein motif:HMMPfam:IPR004664"
+ /inference="protein motif:HMMTigr:IPR005274"
+ /inference="similar to AA sequence:REFSEQ:NP_807523.1"
+ /note="'KEGG: eci:UTI89_C4054 5.4e-156 yhjD; hypothetical
+ protein;
+ COG: COG1295 Predicted membrane protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572962.1"
+ /db_xref="GI:161505851"
+ /db_xref="InterPro:IPR004664"
+ /db_xref="InterPro:IPR005274"
+ /translation="MTQENNVKRPIQELEHDPIQKIETQPHDPPEKNEKANQALHSVT
+ TLMQKIQRQPMVAHLIRATERFNDRLGNQFGAAITYFSFLSMIPIMMVSFAAAGFILA
+ SHPNLLEDIFSKILMNVSDPTLASTLKNTINTAVQQRTTVGLVGLGIALYSGVNWMGN
+ LREAIRAQSRDVWERTPQDQEKIWLKYLRDFISLIGLLVALIITLSITSIAGSAQQMI
+ ISALYLDSIEWLKPAWHLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAAI
+ GFEVIKIIMTYTLPSLVKSPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDP
+ RMPGKTQR"
+ misc_feature complement(3965801..3966625)
+ /locus_tag="SARI_04028"
+ /note="inner membrane protein YhjD; Region: TIGR00766"
+ /db_xref="CDD:188082"
+ gene 3966746..3966874
+ /locus_tag="SARI_04027"
+ CDS 3966746..3966874
+ /locus_tag="SARI_04027"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572963.1"
+ /db_xref="GI:161505850"
+ /translation="MLQFLNRAFYVIFLRHQVGSPSSLIEYVSIASPWLMLKTRHC"
+ gene complement(3966855..3967757)
+ /locus_tag="SARI_04029"
+ CDS complement(3966855..3967757)
+ /locus_tag="SARI_04029"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="protein motif:HMMPfam:IPR005119"
+ /inference="similar to AA sequence:INSD:"
+ /note="'KEGG: shn:Shewana3_3435 6.2e-12 transcriptional
+ regulator, LysR family K06022;
+ COG: COG0583 Transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572964.1"
+ /db_xref="GI:161505852"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR005119"
+ /db_xref="InterPro:IPR011991"
+ /translation="MMDKIYAMKLFIHVAERESFSRAAEEVGLPKGSVSRQIQALENQ
+ LGTRLLHRTTRRVQLTQDGMAYYERAKDLLSNLDELEGLFQPDPASISGKIRVDIPPG
+ LTNSLIMPRLSTFLHHYPGIALELCSSDRQVDLLREDFDCVVRTEPLHAPGILTRPLG
+ KLTRVNCASPQYLARFGYPESLDDLALHAMVHYSLTPGISSPGFSFETPHGMQWVKTG
+ GMLTVNSTETWHTACLAGLGIIQTPRITVREALRAGTLIEILPQYRASPLPVTLHYPH
+ RRNLSRRVHLFMVWLTETINNAAF"
+ misc_feature complement(3966873..3967739)
+ /locus_tag="SARI_04029"
+ /note="Transcriptional regulator [Transcription]; Region:
+ LysR; COG0583"
+ /db_xref="CDD:223656"
+ misc_feature complement(3966879..3967481)
+ /locus_tag="SARI_04029"
+ /note="The C-terminal substrate binding domain of an
+ uncharacterized LysR-type transcriptional regulator
+ CrgA-like, contains the type 2 periplasmic binding fold;
+ Region: PBP2_CrgA_like_3; cd08472"
+ /db_xref="CDD:176161"
+ misc_feature complement(order(3966948..3966950,3967029..3967031,
+ 3967080..3967082,3967272..3967274,3967278..3967280,
+ 3967320..3967322,3967437..3967439,3967449..3967451))
+ /locus_tag="SARI_04029"
+ /note="putative effector binding pocket; other site"
+ /db_xref="CDD:176161"
+ misc_feature complement(order(3967053..3967055,3967062..3967067,
+ 3967086..3967100,3967191..3967193,3967374..3967394,
+ 3967398..3967400,3967410..3967412,3967419..3967424,
+ 3967428..3967433,3967443..3967448))
+ /locus_tag="SARI_04029"
+ /note="putative dimerization interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:176161"
+ gene 3968384..3968986
+ /locus_tag="SARI_04030"
+ CDS 3968384..3968986
+ /locus_tag="SARI_04030"
+ /inference="protein motif:BlastProDom:IPR000792"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000792"
+ /inference="protein motif:HMMSmart:IPR000792"
+ /inference="protein motif:ScanRegExp:IPR000792"
+ /inference="protein motif:superfamily:IPR011006"
+ /inference="similar to AA sequence:REFSEQ:NP_462507.1"
+ /note="'KEGG: ava:Ava_2028 8.5e-16 two component
+ transcriptional regulator, LuxR family;
+ COG: COG2197 Response regulator containing a CheY-like
+ receiver domain and an HTH DNA-binding domain;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572965.2"
+ /db_xref="GI:448236288"
+ /db_xref="InterPro:IPR000792"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR011006"
+ /db_xref="InterPro:IPR011991"
+ /translation="MQVIMFDRQSIFIHGMKISLQQRIPGVSIQGVCQTEELWQKVES
+ APDALVMLDGGLDAEFCRELLQKTARLFPEVRIIITAMEGSQRWLHEMMQFNVQAVVP
+ RDSDAETFALALNTVSRGMMFLPGDWLNSTELASRDIKALSARQREILKMLAAGESNK
+ QIGRALNISTGTVKAHLESLYRRLDVKNRTQAAMMLNESN"
+ misc_feature 3968384..3968977
+ /locus_tag="SARI_04030"
+ /note="Response regulator containing a CheY-like receiver
+ domain and an HTH DNA-binding domain [Signal transduction
+ mechanisms / Transcription]; Region: CitB; COG2197"
+ /db_xref="CDD:225107"
+ misc_feature 3968807..3968977
+ /locus_tag="SARI_04030"
+ /note="C-terminal DNA-binding domain of LuxR-like
+ proteins. This domain contains a helix-turn-helix motif
+ and binds DNA. Proteins belonging to this group are
+ response regulators; some act as transcriptional
+ activators, others as transcriptional repressors. Many...;
+ Region: LuxR_C_like; cd06170"
+ /db_xref="CDD:99777"
+ misc_feature order(3968810..3968818,3968855..3968863,3968885..3968890,
+ 3968894..3968899,3968903..3968917,3968948..3968950)
+ /locus_tag="SARI_04030"
+ /note="DNA binding residues [nucleotide binding]"
+ /db_xref="CDD:99777"
+ misc_feature order(3968843..3968845,3968849..3968851,3968855..3968857,
+ 3968948..3968956,3968963..3968965,3968972..3968977)
+ /locus_tag="SARI_04030"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99777"
+ gene complement(3968998..3969348)
+ /locus_tag="SARI_04031"
+ CDS complement(3968998..3969348)
+ /locus_tag="SARI_04031"
+ /inference="similar to AA sequence:REFSEQ:YP_218526.1"
+ /note="'KEGG: bam:Bamb_4258 1.3e-10 lysozyme K01185;
+ COG: COG3772 Phage-related lysozyme (muraminidase);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572966.1"
+ /db_xref="GI:161505854"
+ /translation="MPHISSRFSSACIAFIKQGQGLSLEKYRDRQGKWVIGYGHILTP
+ DETLTFITPEQAEAFLLDDLNNCDKLLQTCLPELHDRFQRETLIALMFSIGHQRFLSL
+ INTSDISQSGISVL"
+ misc_feature complement(<3969016..3969348)
+ /locus_tag="SARI_04031"
+ /note="Phage-related lysozyme (muraminidase) [General
+ function prediction only]; Region: COG3772"
+ /db_xref="CDD:226295"
+ misc_feature complement(3969289..3969291)
+ /locus_tag="SARI_04031"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:238249"
+ gene 3969628..3971217
+ /locus_tag="SARI_04032"
+ CDS 3969628..3971217
+ /locus_tag="SARI_04032"
+ /inference="similar to AA sequence:INSD:AAL22464.1"
+ /note="'COG: NOG26124 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572967.1"
+ /db_xref="GI:161505855"
+ /translation="MTNSASQATCAPFEHSLGIIRQASMEILLLLGIHTAEGKEPRWF
+ MEQLEQARLNLGGWGAVAKKLRINDAQLSQFMLQLRRLQQQVPQYDSGQEVSENQLIA
+ ALRFVTSLEQLRQQQPLLLYQTELEEPDQEAHLEAQRQLRAIELTLKALIARAWPDRA
+ SLNHYLKQHFGPDRLRQWVKQGEDQHALEGMLFSELALMVVDKKLFARHYVSIFNDAS
+ ALTLFVEPRTTLRMFLDDCRLARNEVIARQPLTSARLMLLNVQYQQIVRPIQRAYAEK
+ RTRVNPASFLLADERELRHFWQIARLKDRQAGGDKHEISESIEPPRKRPPRTPEERDQ
+ LISGVLWGGVCVMTLAILAGAFWLFSTLPPGSGAAQSPAIAQDEPPREAPSARETITH
+ MGITWDTYNMRAAIDRNDTRVTALFLQGGMNWQLAWTEQAFAARHTEVLQLLLRYSAL
+ MDEVKPCRRFITTLSHAMSSGAPLTAMHKTYLQTFCTVPAVVTRQEYDTEQARLRAQA
+ RPSADNNKWLKIQSAIYDAIH"
+ STS 3970541..3972094
+ /standard_name="bnlg1246b"
+ /db_xref="UniSTS:472187"
+ gene complement(3971230..3972879)
+ /gene="treF"
+ /locus_tag="SARI_04033"
+ CDS complement(3971230..3972879)
+ /gene="treF"
+ /locus_tag="SARI_04033"
+ /inference="protein motif:HMMPfam:IPR001661"
+ /inference="protein motif:ScanRegExp:IPR001661"
+ /inference="protein motif:superfamily:IPR008928"
+ /note="cytoplasmic; catalyzes the hydrolysis of trehalose
+ to glucose"
+ /codon_start=1
+ /transl_table=11
+ /product="trehalase"
+ /protein_id="YP_001572968.1"
+ /db_xref="GI:161505856"
+ /db_xref="InterPro:IPR001661"
+ /db_xref="InterPro:IPR008928"
+ /translation="MLHQKLNPTSSEDLTIDVDLLYETDPCELKLDEMIEAEPEPEMI
+ EGLPASDALTPADRYLELFEHVQSTKLFPDSKTFPDCAPKMDPLDILIRYRKVRRHRD
+ FDLRRFVENHFWLPETLSSEYVSNPENSLKEHIDQLWPILTREPQDHIPWSSLLALPQ
+ SYIVPGGRFSETYYWDSYFTMLGLAESGREDLLKCMADNFAWMIENYGHIPNGNRTYY
+ LSRSQPPVFALMVELFEEDGVRGARRYLDHLKMEYAFWMDGAESLALNQAYRHVVRMP
+ DGSLLNRYWDDRDTPRDESWLEDVETAKHSGRPPNEVYRDLRAGAASGWDYSSRWLRD
+ AGRLASIRTTQFIPIDLNAFLYKLESAIANISALKGERDTEALFRQKASDRRAAVNHY
+ LWDDENGCYRDYDWRREEMALFSAASIVPLYVGMANHEQADRLANVVRSRLLTPGGIM
+ ATEYETGEQWDKPNGWAPLQWMAIQGFKLYGDDMLGDEIAHNWLKTVNHFYQEHHKLI
+ EKYHISGGTPREGGGGEYPLQDGFGWTNGVVRRLIGLYGEP"
+ misc_feature complement(3971233..3972879)
+ /gene="treF"
+ /locus_tag="SARI_04033"
+ /note="trehalase; Provisional; Region: treF; PRK13270"
+ /db_xref="CDD:183934"
+ misc_feature complement(3971239..3972672)
+ /gene="treF"
+ /locus_tag="SARI_04033"
+ /note="Trehalase; Region: Trehalase; pfam01204"
+ /db_xref="CDD:216362"
+ gene 3973206..3973925
+ /locus_tag="SARI_04034"
+ CDS 3973206..3973925
+ /locus_tag="SARI_04034"
+ /inference="protein motif:Gene3D:IPR000524"
+ /inference="protein motif:HMMPfam:IPR000524"
+ /inference="protein motif:HMMPfam:IPR011663"
+ /inference="protein motif:HMMSmart:IPR000524"
+ /inference="protein motif:superfamily:IPR008948"
+ /inference="similar to AA sequence:INSD:AAL22462.1"
+ /note="'KEGG: reh:H16_A3019 6.0e-15 hutC; histidine
+ utilization repressor;
+ COG: COG2188 Transcriptional regulators;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572969.1"
+ /db_xref="GI:161505857"
+ /db_xref="InterPro:IPR000524"
+ /db_xref="InterPro:IPR008948"
+ /db_xref="InterPro:IPR011663"
+ /translation="MIEQPDSNSAKPLYKQLEAALKEAIARGEYKPGQQIPTENELSA
+ RWQVSRVTVRKALDALTRENLLTRVSGKGTFVSSEKFQRSMTGIMSFSELCQSQGRRP
+ GSRTIKSVFESVDDETKALLNMNNGEKAVVIERIRYADDVAVSLETVHLPPRFAFLLE
+ EDLNNHSLYECLREKYHLWFIHSRKMIELVYASFEVAHYLGVNEGYPLILIKSEMIDN
+ KGELSCVSQQLIVGDKIRFTV"
+ misc_feature 3973221..3973922
+ /locus_tag="SARI_04034"
+ /note="Transcriptional regulators [Transcription]; Region:
+ PhnF; COG2188"
+ /db_xref="CDD:225099"
+ misc_feature 3973239..3973436
+ /locus_tag="SARI_04034"
+ /note="Winged helix-turn-helix (WHTH) DNA-binding domain
+ of the GntR family of transcriptional regulators; Region:
+ WHTH_GntR; cd07377"
+ /db_xref="CDD:153418"
+ misc_feature order(3973239..3973241,3973245..3973247,3973314..3973316,
+ 3973320..3973325,3973347..3973361,3973365..3973370,
+ 3973377..3973379,3973407..3973412,3973416..3973427)
+ /locus_tag="SARI_04034"
+ /note="DNA-binding site [nucleotide binding]; DNA binding
+ site"
+ /db_xref="CDD:153418"
+ misc_feature 3973494..3973913
+ /locus_tag="SARI_04034"
+ /note="UTRA domain; Region: UTRA; pfam07702"
+ /db_xref="CDD:219527"
+ gene 3974083..3975078
+ /locus_tag="SARI_04035"
+ CDS 3974083..3975078
+ /locus_tag="SARI_04035"
+ /inference="protein motif:HMMPfam:IPR001347"
+ /inference="similar to AA sequence:INSD:AAL22461.1"
+ /note="'KEGG: lwe:lwe2018 2.1e-28 sugar isomerase domain
+ protein;
+ COG: COG2222 Predicted phosphosugar isomerases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572970.1"
+ /db_xref="GI:161505858"
+ /db_xref="InterPro:IPR001347"
+ /translation="MEPEESMMGMKETVSNIVAGQAEKGGVKHVYYVACGGSYAAFYP
+ AKAFLEKEAKALTVGLYNSGEFINNPPVALGENAVVVVASHKGNTPETIKAAEIARQH
+ GTPVIGLTWVMDSPLVAHCDYVETYTFGDGKDIAGEKTMKGLLSAVELLQQTEGYAHY
+ DDFQDGVSKINRIVWRACEQVAERAQAFAQEYKDDKVIYTVASGAGYGAAYLQSICIF
+ MEMQWIHSACIHSGEFFHGPFEITDANTPFFFQFSEGNTRAVDERALNFLKKYGRRIE
+ VVDAKELGLSTIKTTVIDYFNHSLFNNVYPVYNRALAEVRQHPLTTRRYMWKVEY"
+ misc_feature 3974086..3975075
+ /locus_tag="SARI_04035"
+ /note="Predicted phosphosugar isomerases [Cell envelope
+ biogenesis, outer membrane]; Region: AgaS; COG2222"
+ /db_xref="CDD:225132"
+ misc_feature 3974167..3974535
+ /locus_tag="SARI_04035"
+ /note="A subgroup of the SIS domain. SIS (Sugar ISomerase)
+ domains are found in many phosphosugar isomerases and
+ phosphosugar binding proteins. SIS domains are also found
+ in proteins that regulate the expression of genes involved
+ in synthesis of phosphosugars; Region: SIS_1; cd05710"
+ /db_xref="CDD:240214"
+ misc_feature order(3974194..3974196,3974332..3974334)
+ /locus_tag="SARI_04035"
+ /note="putative active site [active]"
+ /db_xref="CDD:240214"
+ misc_feature 3974629..3975072
+ /locus_tag="SARI_04035"
+ /note="SIS (Sugar ISomerase) domain repeat 2 found in
+ Glucosamine 6-phosphate synthase (GlmS) and
+ Glucosamine-6-phosphate deaminase (GlmD). The SIS domain
+ is found in many phosphosugar isomerases and phosphosugar
+ binding proteins. GlmS contains a N-terminal...; Region:
+ SIS_GlmS_GlmD_2; cd05009"
+ /db_xref="CDD:240142"
+ misc_feature order(3974692..3974694,3974737..3974739,3974749..3974751,
+ 3974755..3974757,3974761..3974763,3974767..3974769,
+ 3974779..3974781,3974785..3974793,3974797..3974808,
+ 3974857..3974862,3974872..3974874,3974878..3974883,
+ 3975049..3975054,3975067..3975069)
+ /locus_tag="SARI_04035"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:240142"
+ misc_feature order(3974731..3974733,3974740..3974742)
+ /locus_tag="SARI_04035"
+ /note="active site"
+ /db_xref="CDD:240142"
+ gene 3975142..3975987
+ /locus_tag="SARI_04036"
+ CDS 3975142..3975987
+ /locus_tag="SARI_04036"
+ /inference="protein motif:HMMPfam:IPR011611"
+ /inference="similar to AA sequence:INSD:AAL22460.1"
+ /note="'KEGG: eco:b3374 1.3e-28 frlD, yhfQ; fructoselysine
+ 6-kinase K00924;
+ COG: COG0524 Sugar kinases, ribokinase family;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572971.1"
+ /db_xref="GI:161505859"
+ /db_xref="InterPro:IPR011611"
+ /translation="MSISVLGIGDNVVDKYLHSGIMYPGGNALNFSVYAKLADIPSAF
+ MGAFGNDDAARHVQDVLRQLQIDISHCRHYTGENGYACIRLTHGDRQFVASNKNGVLR
+ EHPFSLSDVDLRYISQFTLVHSSINGHLESELEKIKQQTVLLSFDFSGRGTDEYFEKV
+ CPWVDYGFISCSGLSPDEIKIKLNKLYRYGCRHIIATCGHEKVYYFSGADYLEWQPVY
+ IEPIDTLGAGDAFLTGFLLSILQSGMAEPDKESVLRAMRQGGKSAAQVLSHYGAFGFG
+ KPFAQ"
+ misc_feature 3975151..3975960
+ /locus_tag="SARI_04036"
+ /note="Fructoselysine kinase-like. Fructoselysine is a
+ fructoseamine formed by glycation, a non-enzymatic
+ reaction of glucose with a primary amine followed by an
+ Amadori rearrangement, resulting in a protein that is
+ modified at the amino terminus and at the...; Region:
+ Fructoselysine_kinase_like; cd01940"
+ /db_xref="CDD:238915"
+ misc_feature 3975154..3975960
+ /locus_tag="SARI_04036"
+ /note="Sugar kinases, ribokinase family [Carbohydrate
+ transport and metabolism]; Region: RbsK; COG0524"
+ /db_xref="CDD:223598"
+ misc_feature order(3975229..3975231,3975817..3975819,3975826..3975828)
+ /locus_tag="SARI_04036"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:238915"
+ misc_feature order(3975649..3975651,3975730..3975732,3975811..3975813,
+ 3975820..3975825,3975832..3975834,3975919..3975921,
+ 3975928..3975930)
+ /locus_tag="SARI_04036"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238915"
+ gene 3976041..3977360
+ /locus_tag="SARI_04037"
+ CDS 3976041..3977360
+ /locus_tag="SARI_04037"
+ /inference="protein motif:BlastProDom:IPR004668"
+ /inference="protein motif:FPrintScan:IPR000576"
+ /inference="protein motif:HMMPfam:IPR004668"
+ /inference="protein motif:HMMPIR:IPR004668"
+ /inference="protein motif:HMMTigr:IPR004668"
+ /inference="similar to AA sequence:REFSEQ:NP_462500.1"
+ /note="functions in anaerobic transport of
+ C4-dicarboxylate compounds such as fumarate; similar to
+ dcuB"
+ /codon_start=1
+ /transl_table=11
+ /product="anaerobic C4-dicarboxylate transporter"
+ /protein_id="YP_001572972.1"
+ /db_xref="GI:161505860"
+ /db_xref="InterPro:IPR000576"
+ /db_xref="InterPro:IPR004668"
+ /translation="MFWTELCIILVALMIGARIGGVFLGMIGGLGVGVMVFIFGLTPS
+ TPPIDVILIILSVVLAAASLQASGGLDLLVKLAEKILRRHPRYITLLAPFICYIFTFM
+ SGTGHVVYSLLPVISEVARDSGIRPERPLSISVIASQQAITASPISAAMAAMIGLMAP
+ LGVSISTIMMICVPATLIGVAMGAIATFNKGKELKDDPEYQRRLAEGLIKPTQKESKN
+ TVVTSRAKLSVALFLTSAIVIVLLGLIPALRPMVETAKGLQPLSMSAAIQITMLSFAC
+ LIVLLCRPQVDQIISGTVFRAGALAIVCAFGLAWMSETFVNGHIALIKAEVQTLLQQH
+ TWLIAIMMFFVSAMVSSQAATTLILLPLGLALGLPAYALIGSWPAVNGYFFIPVAGQC
+ LAALAFDDTGTTRIGKYVLNHSFMRPGLVNVIVSVIVGLLIGKMVLA"
+ misc_feature 3976041..3977294
+ /locus_tag="SARI_04037"
+ /note="Anaerobic C4-dicarboxylate transporter [General
+ function prediction only]; Region: DcuB; COG2704"
+ /db_xref="CDD:225332"
+ misc_feature 3976041..3977294
+ /locus_tag="SARI_04037"
+ /note="anaerobic C4-dicarboxylate transporter; Reviewed;
+ Region: PRK09412"
+ /db_xref="CDD:236503"
+ gene 3977419..3978462
+ /locus_tag="SARI_04038"
+ CDS 3977419..3978462
+ /locus_tag="SARI_04038"
+ /inference="protein motif:BlastProDom:IPR006034"
+ /inference="protein motif:FPrintScan:IPR006034"
+ /inference="protein motif:HMMPanther:IPR006034"
+ /inference="protein motif:HMMPfam:IPR006034"
+ /inference="protein motif:HMMTigr:IPR004550"
+ /inference="protein motif:ScanRegExp:IPR006034"
+ /inference="protein motif:superfamily:IPR006034"
+ /inference="similar to AA sequence:INSD:AAL22458.1"
+ /note="'KEGG: stm:STM3598 1.9e-176 putative L-asparaginase
+ K01424;
+ COG: COG0252 L-asparaginase/archaeal Glu-tRNAGln
+ amidotransferase subunit D;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572973.1"
+ /db_xref="GI:161505861"
+ /db_xref="InterPro:IPR004550"
+ /db_xref="InterPro:IPR006034"
+ /translation="MKIRVFMATVLLLISHCVFSTTSLPHIVILATGGTIAGTAANNT
+ QTAGYKSGELGVQTLINAVPEMNNIARVDGEQVANIGSENMTSDIILKLSQKVNALLA
+ RDDVDGVVITHGTDTLDETAYFLNLTVKSDKPVVFTAAMRPASAISADGAMNLLEAVT
+ VAADPNAKGRGVMVVLNDRIGSARFVTKTNATTLDTFKAPEEGYLGVIVNGQPQFETR
+ VEKIHTLRSVFDVRNIKKLPNVVIIYGYQDDPEYMYDAAIAHHADGIIYAGTGAGSVS
+ VRSDAGIKKAEKAGIIVVRASRAGNGVVPLDKGQPGLVSDSLNPAKARVLLMTALTQT
+ HKPELIQNYFSTY"
+ misc_feature 3977563..3978441
+ /locus_tag="SARI_04038"
+ /note="Type II (periplasmic) bacterial L-asparaginase;
+ Region: L-asparaginase_II; cd08964"
+ /db_xref="CDD:199208"
+ misc_feature order(3977659..3977667,3977758..3977766,3977836..3977838,
+ 3977980..3977982,3978238..3978240)
+ /locus_tag="SARI_04038"
+ /note="active site"
+ /db_xref="CDD:199208"
+ misc_feature order(3977665..3977679,3977686..3977688,3977764..3977769,
+ 3977773..3977781,3977980..3977994,3978136..3978144,
+ 3978148..3978150,3978154..3978156,3978166..3978168,
+ 3978172..3978177,3978184..3978189,3978196..3978198,
+ 3978202..3978204,3978226..3978234,3978238..3978246,
+ 3978307..3978315,3978322..3978327,3978376..3978381,
+ 3978388..3978390)
+ /locus_tag="SARI_04038"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:199208"
+ misc_feature order(3977665..3977679,3977686..3977688,3977764..3977766,
+ 3977776..3977778,3977842..3977844,3977857..3977865,
+ 3977872..3977877,3977947..3977952,3977962..3977964,
+ 3977968..3977970,3977980..3977991,3977995..3977997,
+ 3978025..3978033,3978037..3978039,3978043..3978045,
+ 3978058..3978060,3978064..3978072,3978076..3978081,
+ 3978142..3978144,3978148..3978150,3978154..3978156,
+ 3978166..3978168,3978172..3978174,3978196..3978198,
+ 3978202..3978204,3978226..3978234,3978238..3978240,
+ 3978244..3978246,3978307..3978312,3978331..3978336)
+ /locus_tag="SARI_04038"
+ /note="homotetramer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:199208"
+ gene complement(3978509..3979861)
+ /locus_tag="SARI_04039"
+ CDS complement(3978509..3979861)
+ /locus_tag="SARI_04039"
+ /inference="protein motif:BlastProDom:IPR001327"
+ /inference="protein motif:FPrintScan:IPR000815"
+ /inference="protein motif:FPrintScan:IPR001100"
+ /inference="protein motif:FPrintScan:IPR013027"
+ /inference="protein motif:Gene3D:IPR004099"
+ /inference="protein motif:HMMPfam:IPR001327"
+ /inference="protein motif:HMMPfam:IPR004099"
+ /inference="protein motif:HMMPfam:IPR013027"
+ /inference="protein motif:HMMTigr:IPR006322"
+ /inference="protein motif:ScanRegExp:IPR012999"
+ /inference="similar to AA sequence:REFSEQ:YP_152578.1"
+ /note="catalyzes the reduction of 2 glutathione to
+ glutathione disulfide; maintains high levels of reduced
+ glutathione in the cytosol; involved in redox regulation
+ and oxidative defense"
+ /codon_start=1
+ /transl_table=11
+ /product="glutathione reductase"
+ /protein_id="YP_001572974.1"
+ /db_xref="GI:161505862"
+ /db_xref="InterPro:IPR000815"
+ /db_xref="InterPro:IPR001100"
+ /db_xref="InterPro:IPR001327"
+ /db_xref="InterPro:IPR004099"
+ /db_xref="InterPro:IPR006322"
+ /db_xref="InterPro:IPR012999"
+ /db_xref="InterPro:IPR013027"
+ /translation="MTKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCVN
+ VGCVPKKIMWHAAQIREAIHLYGPDYGFDATINQFDWSKLIASRTAYIDRIHTSYDNV
+ LGKNNVDVIKGFARFVDAKTIEVNGETITADHILIATGGRPSHPGIPGVEYGIDSDGF
+ FALSALPERVAVVGAGYIAVELAGVINALGAKTHLFVRKHAPLRSFDPMISETLVEVM
+ NAEGPQLHTHAVPKAVVKNADGSLTLELEDGRTENVDCLIWAIGREPSTDNINLAAAG
+ VKTNEKGYIIVDKLQNTNVEGIYAVGDNTGAVELTPVAVAAGRRLSERLFNNKPDEYL
+ DYSNIPTVVFSHPPIGTVGLSEPQAREQYGNEQVKVYQSSFTAMYTAVTTHRQPCRMK
+ LVCVGPEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTASEEFVTMR
+ "
+ misc_feature complement(3978512..3979861)
+ /locus_tag="SARI_04039"
+ /note="glutathione reductase; Validated; Region: PRK06116"
+ /db_xref="CDD:235701"
+ misc_feature complement(3979265..>3979486)
+ /locus_tag="SARI_04039"
+ /note="NAD(P)-binding Rossmann-like domain; Region:
+ NAD_binding_8; cl17500"
+ /db_xref="CDD:248054"
+ misc_feature complement(3979115..3979357)
+ /locus_tag="SARI_04039"
+ /note="Pyridine nucleotide-disulphide oxidoreductase;
+ Region: Pyr_redox; pfam00070"
+ /db_xref="CDD:215691"
+ misc_feature complement(3978512..3978847)
+ /locus_tag="SARI_04039"
+ /note="Pyridine nucleotide-disulphide oxidoreductase,
+ dimerisation domain; Region: Pyr_redox_dim; pfam02852"
+ /db_xref="CDD:217252"
+ gene complement(3979966..3980808)
+ /locus_tag="SARI_04040"
+ CDS complement(3979966..3980808)
+ /locus_tag="SARI_04040"
+ /inference="protein motif:HMMPfam:IPR007473"
+ /inference="protein motif:ScanRegExp:IPR002052"
+ /inference="similar to AA sequence:REFSEQ:NP_458320.1"
+ /note="'COG: COG2961 Protein involved in catabolism of
+ external DNA;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572975.1"
+ /db_xref="GI:161505863"
+ /db_xref="InterPro:IPR002052"
+ /db_xref="InterPro:IPR007473"
+ /translation="MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKEKPFLYLDTHAG
+ AGRYQLGSEHAERTGEYLEGIARIWQQDDLPAELEAYIGVVKHFNRSGQLRYYPGSPL
+ IARQLLREQDNLQLTELHPSDFPLLRAEFQKDNRARVERADGYQQLKAKLPPVSRRGL
+ ILIDPPYEIKTDYQAVVSGISEGYKRFATGTYALWYPVVLRQQIKRMIHDLEATGIRK
+ ILQIELAIRPDSDQRGMTASGMIVINPPWKLEQQMNNVLPWLHSRLAPNGHGHTSISW
+ IVPE"
+ misc_feature complement(3979969..3980805)
+ /locus_tag="SARI_04040"
+ /note="Protein involved in catabolism of external DNA
+ [General function prediction only]; Region: ComJ; COG2961"
+ /db_xref="CDD:225509"
+ gene 3981004..3982290
+ /locus_tag="SARI_04041"
+ CDS 3981004..3982290
+ /locus_tag="SARI_04041"
+ /inference="protein motif:BlastProDom:IPR001011"
+ /inference="protein motif:HMMPfam:IPR000326"
+ /inference="protein motif:HMMSmart:IPR000326"
+ /inference="protein motif:superfamily:IPR008934"
+ /inference="similar to AA sequence:INSD:AAL22455.1"
+ /note="'KEGG: cgl:NCgl1145 7.4e-23 cgl1192; serine
+ protease;
+ COG: COG1404 Subtilisin-like serine proteases;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572976.1"
+ /db_xref="GI:161505864"
+ /db_xref="InterPro:IPR000326"
+ /db_xref="InterPro:IPR001011"
+ /db_xref="InterPro:IPR008934"
+ /translation="MKGTIMKLHITVLASSLMLAMPALAKDISLSQAELIAKSVTPNS
+ TSDAFKSLESQWLAQLRKALQGDGAALTRDDLIQMQQNPGQADTAWLQASGYDFQTSD
+ NQQVGITLLSAFNTLPEAVLKDNLAMVTAINHDADVNTRHQALADAESVGYLYFLSGA
+ MGPRLGRAFLTAYDKGELGKAAALIKASEVSTSAAKKYFHYPRPFQVPGNTIHLTPDD
+ VVVKDGHPYTADGASFPSGHTNVGYTDALLMAEMLPERFDALVIRGARYGYSRLVLGV
+ HYPLDVIGARMVAQRNVAHYLNDPHYRTLFNEARIQLREALMKECGTTIVECAASTEK
+ EDPYRDPAMHTFYRFTMTYNLPQQKSEHQPLKVPKGADVLLQAALPNFSTAQRQALME
+ ETVLPAGYPLSGETDDQQFWQRLDLSAAYEMARKTR"
+ misc_feature 3981238..3981945
+ /locus_tag="SARI_04041"
+ /note="PAP2, bacterial acid phosphatase or class A
+ non-specific acid phosphatases. These enzymes catalyze
+ phosphomonoester hydrolysis, with optimal activity in low
+ pH conditions. They are secreted into the periplasmic
+ space, and their physiological role remains...; Region:
+ PAP2_acid_phosphatase; cd03397"
+ /db_xref="CDD:239491"
+ misc_feature <3981544..3981870
+ /locus_tag="SARI_04041"
+ /note="Membrane-associated phospholipid phosphatase [Lipid
+ metabolism]; Region: PgpB; COG0671"
+ /db_xref="CDD:223743"
+ misc_feature order(3981589..3981591,3981610..3981612,3981709..3981717,
+ 3981814..3981816,3981832..3981834,3981844..3981846)
+ /locus_tag="SARI_04041"
+ /note="active site"
+ /db_xref="CDD:239491"
+ gene 3982472..3984514
+ /locus_tag="SARI_04042"
+ CDS 3982472..3984514
+ /locus_tag="SARI_04042"
+ /inference="protein motif:HMMPfam:IPR001567"
+ /inference="protein motif:ScanRegExp:IPR006025"
+ /note="'KEGG: sec:SC3523 0. opdA; oligopeptidase A
+ K01414;
+ COG: COG0339 Zn-dependent oligopeptidases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="oligopeptidase A"
+ /protein_id="YP_001572977.1"
+ /db_xref="GI:161505865"
+ /db_xref="InterPro:IPR001567"
+ /db_xref="InterPro:IPR006025"
+ /translation="MTNPLLTSFSLPPFSAIKPEHVVPAVIKALADCRTTVEGVVAHG
+ APYTWENLCQPLAEADDALGRIFSPVSHLNSVKNSPELREAYEQTLPLLSEYSTWVGQ
+ HEGLYNAYRDLRDGDYYATLNTAQKKAVDNALRDFELSGIGLPKEKQQRYGEIATRLS
+ ELGNLYSNNVLDATMGWTKLITDEAELTGMPESALAAAKAQAEAKEQQGYLLTLDIPS
+ YLPVMTYCDNQALREEMYRAYSTRASDQGPNAGKWDNSPVMEEILALRHELAQLLGFE
+ NYAHKSLATKMAENPQQVLDFLTDLAKRARPQGEKELAQLRAFAKAEFGVDELQPWDI
+ AYYSEKQKQHLYSISDEQLRPYFPENKAVNGLFEVVKRIYGITAKERTDVEVWHPDVR
+ FFDLYDENHELRGSFYLDLYARENKRGGAWMDDCVGQMRKADGTLQKPVAYLTCNFNR
+ PVNGKPALFTHDEVITLFHEFGHGLHHMLTRIETAGVSGISGVPWDAVELPSQFMENW
+ CWEPDALAFISGHYETGEPLPKELLDKMLAAKNYQAALFILRQLEFGLFDFRLHAEFN
+ PQQGAKILETLFEIKKQVAVVPSPTWGRFPHAFSHIFAGGYAAGYYSYLWADVLAADA
+ YSRFEEEGIFNRDTGQSFLDNILTRGGSEEPMELFKRFRGREPQLDAMLAHYGIKG"
+ misc_feature 3982472..3984511
+ /locus_tag="SARI_04042"
+ /note="oligopeptidase A; Provisional; Region: PRK10911"
+ /db_xref="CDD:182832"
+ misc_feature 3982529..3984505
+ /locus_tag="SARI_04042"
+ /note="Peptidase family M3 dipeptidyl carboxypeptidase
+ (DCP); Region: M3A_DCP; cd06456"
+ /db_xref="CDD:188995"
+ misc_feature order(3983732..3983740,3983876..3983881,3983888..3983890,
+ 3983966..3983968,3983975..3983977,3984122..3984124,
+ 3984248..3984253,3984269..3984274,3984284..3984292,
+ 3984302..3984304,3984311..3984313)
+ /locus_tag="SARI_04042"
+ /note="active site"
+ /db_xref="CDD:188995"
+ misc_feature order(3983876..3983878,3983888..3983890,3983966..3983968)
+ /locus_tag="SARI_04042"
+ /note="Zn binding site [ion binding]; other site"
+ /db_xref="CDD:188995"
+ gene 3984523..3985272
+ /locus_tag="SARI_04043"
+ CDS 3984523..3985272
+ /locus_tag="SARI_04043"
+ /inference="protein motif:HMMPfam:IPR007536"
+ /inference="similar to AA sequence:INSD:AAZ90278.1"
+ /note="predicted SAM-dependent methyltransferase"
+ /codon_start=1
+ /transl_table=11
+ /product="putative methyltransferase"
+ /protein_id="YP_001572978.1"
+ /db_xref="GI:161505866"
+ /db_xref="InterPro:IPR007536"
+ /translation="MKICLLDETGAGDGALSVLAARWGLEHDENNLMALVLTPQHLEL
+ RKRDEPKLGGIFVDFLGGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRD
+ AFVLASVGCRVRMLERNPVVAALLDDGLARGYADADIGPWLRQRLQLIHASSLTALTD
+ ITPRPQVVYLDPMFPHRQKSALVKKEMRVFQSLVGPDLDADGLLEPARQLATKRVVVK
+ RPDYAPPLADIATPNAIVTKGHRFDIYAGTA"
+ misc_feature 3984793..>3985050
+ /locus_tag="SARI_04043"
+ /note="S-adenosylmethionine-dependent methyltransferases
+ (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
+ that use S-adenosyl-L-methionine (SAM or AdoMet) as a
+ substrate for methyltransfer, creating the product
+ S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
+ cd02440"
+ /db_xref="CDD:100107"
+ misc_feature order(3984805..3984825,3984871..3984876,3984976..3984984,
+ 3985033..3985035)
+ /locus_tag="SARI_04043"
+ /note="S-adenosylmethionine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:100107"
+ gene complement(3985300..3986502)
+ /locus_tag="SARI_04044"
+ CDS complement(3985300..3986502)
+ /locus_tag="SARI_04044"
+ /inference="protein motif:BlastProDom:IPR001327"
+ /inference="protein motif:HMMPfam:IPR001327"
+ /inference="protein motif:HMMPfam:IPR013027"
+ /inference="similar to AA sequence:REFSEQ:YP_348182.1"
+ /note="'KEGG: pfo:Pfl_2451 6.6e-119 FAD-dependent pyridine
+ nucleotide-disulphide oxidoreductase K03885;
+ COG: COG1252 NADH dehydrogenase, FAD-containing subunit;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572979.1"
+ /db_xref="GI:161505867"
+ /db_xref="InterPro:IPR001327"
+ /db_xref="InterPro:IPR013027"
+ /translation="MHQHILIVGAGFSGMWAALSAARLVDKYQSENIKITVIAPQPEL
+ RIRPRFYENAVSTLVAPLQPLFDITGVNFLRGTVRQILPDSKEVRWTDASGETRVSRY
+ DRMVLASGSHVDRSQVAGAQTHAFDLDQLESAAVLERHLQGLAYQAESEARNTVVVCG
+ GGFTGIEMALELPGRLRDILGVDAKTRVVVVERSTEPGACYSEALRNIIIEASAELGV
+ EWIVNAEVESVDAVGVTLKDGQTIASQTVIWTVGVQANGLTAQIDAPRDRLGRLHVNT
+ ELQVSGHEDIYATGDVAYATTDDEGHHALMTCQHAILLGKFAGNNAAASLLKVTPLPY
+ RQENYVTCLDLGAWGAVYTEGWDQQVKLTRAEAKKLKMSITSELIYPPKADRAVAFKI
+ ADPLAPFV"
+ misc_feature complement(3985324..3986502)
+ /locus_tag="SARI_04044"
+ /note="NADH dehydrogenase, FAD-containing subunit [Energy
+ production and conversion]; Region: Ndh; COG1252"
+ /db_xref="CDD:224172"
+ misc_feature complement(3985918..>3986331)
+ /locus_tag="SARI_04044"
+ /note="NAD(P)-binding Rossmann-like domain; Region:
+ NAD_binding_8; cl17500"
+ /db_xref="CDD:248054"
+ misc_feature complement(3985783..3986037)
+ /locus_tag="SARI_04044"
+ /note="Pyridine nucleotide-disulphide oxidoreductase;
+ Region: Pyr_redox; pfam00070"
+ /db_xref="CDD:215691"
+ gene 3986735..3987238
+ /locus_tag="SARI_04045"
+ CDS 3986735..3987238
+ /locus_tag="SARI_04045"
+ /inference="protein motif:BlastProDom:IPR000944"
+ /inference="protein motif:HMMPfam:IPR000944"
+ /inference="protein motif:HMMTigr:IPR000944"
+ /inference="protein motif:ScanRegExp:IPR000944"
+ /inference="protein motif:superfamily:IPR009061"
+ /inference="similar to AA sequence:REFSEQ:ZP_01638688.1"
+ /note="'KEGG: ama:AM656 3.2e-08 aminotransferase, class V
+ K04487;
+ COG: COG1959 Predicted transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572980.1"
+ /db_xref="GI:161505868"
+ /db_xref="InterPro:IPR000944"
+ /db_xref="InterPro:IPR009061"
+ /translation="MAFYSSGVEYGIHSLMCMVDSKGDAREMSVREIADLQSVPYDYL
+ AKIFTRLSKAGLVRSIEGKGGGFQLAKPAEHITVLDVVNAIDGDKRIFECREIRQRLT
+ VFDEQPPAWACEGICGVRSVMDMAQQRMEEALEQHTILDLARKMYRKAPDTFVIEVQA
+ WIDARKS"
+ misc_feature 3986744..3987220
+ /locus_tag="SARI_04045"
+ /note="Predicted transcriptional regulator
+ [Transcription]; Region: COG1959"
+ /db_xref="CDD:224870"
+ misc_feature 3986744..3986989
+ /locus_tag="SARI_04045"
+ /note="Transcriptional regulator; Region: Rrf2; pfam02082"
+ /db_xref="CDD:202106"
+ gene complement(3987336..3988757)
+ /locus_tag="SARI_04046"
+ CDS complement(3987336..3988757)
+ /locus_tag="SARI_04046"
+ /inference="protein motif:HMMPanther:IPR000109"
+ /inference="protein motif:HMMPanther:IPR005279"
+ /inference="protein motif:HMMPfam:IPR000109"
+ /inference="protein motif:HMMTigr:IPR005279"
+ /inference="protein motif:ScanRegExp:IPR000109"
+ /inference="similar to AA sequence:INSD:AAX67427.1"
+ /note="member of the POT family of peptide transporters;
+ probable proton-dependent peptide transporter function"
+ /codon_start=1
+ /transl_table=11
+ /product="inner membrane transporter YhiP"
+ /protein_id="YP_001572981.1"
+ /db_xref="GI:161505869"
+ /db_xref="InterPro:IPR000109"
+ /db_xref="InterPro:IPR005279"
+ /translation="MIFFVELWERFGYYGVQGILAVFFVEQLGFSQEQAFITFGAFAA
+ LVYGLISIGGYVGDHLLGTKRTLVLGAIVLATGYFMTGMSLLNPDLIFIALGTIAVGN
+ GLFKANPASLLSKCYLPKDPRLDGAFTLFYMSINIGSLLSLSLAPVIADKFGYTVTYN
+ LCGAGLIVALLVYFACRGMVKNIGSEPDHKPLRFRNLLLVLLGTVVMVFLCAWLMHNV
+ KIANLVLIVLSIVVTIFFFREAFRLDKTGRNKMFVAFILMIEAVLFYILYAQMPTSLN
+ FFAINNVHHEILGFAINPVSFQALNPFWVVVASPVLAAIYTRLGSKGKDLTMPMKFTL
+ GMFLCALGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELLISALGLAMVAALVP
+ QHLMGFILGMWFLTQAAAFLLGGYVATFTAVPENITDPLQTLPIYTDVFSKIGLVTLA
+ VAVVMAIMVPWLNRMINTPDSAR"
+ misc_feature complement(3987342..3988757)
+ /locus_tag="SARI_04046"
+ /note="dipeptide/tripeptide permease B; Provisional;
+ Region: PRK10207"
+ /db_xref="CDD:182306"
+ misc_feature complement(<3988218..3988757)
+ /locus_tag="SARI_04046"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature complement(order(3988341..3988343,3988359..3988364,
+ 3988371..3988376,3988416..3988418,3988425..3988430,
+ 3988437..3988442,3988449..3988454,3988596..3988601,
+ 3988605..3988610,3988620..3988622,3988629..3988634,
+ 3988641..3988643,3988692..3988694,3988698..3988700,
+ 3988704..3988712,3988719..3988721))
+ /locus_tag="SARI_04046"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ misc_feature complement(3987525..3988568)
+ /locus_tag="SARI_04046"
+ /note="POT family; Region: PTR2; pfam00854"
+ /db_xref="CDD:216153"
+ gene complement(3989128..3989562)
+ /locus_tag="SARI_04047"
+ CDS complement(3989128..3989562)
+ /locus_tag="SARI_04047"
+ /inference="protein motif:Gene3D:IPR006016"
+ /inference="protein motif:HMMPfam:IPR006016"
+ /inference="similar to AA sequence:INSD:AAV79259.1"
+ /note="'COG: COG0589 Universal stress protein UspA and
+ related nucleotide-binding proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="universal stress protein A"
+ /protein_id="YP_001572982.1"
+ /db_xref="GI:161505870"
+ /db_xref="InterPro:IPR006016"
+ /translation="MAYQHILIAVDLSPESKVLVEKAVSMARPYNAKISLIHVDVNYS
+ DLYTGLIDVNLGDMQKRISEETHQALTELSTNAGYPITETLSGSGDLGQVLVDAIKKY
+ DMDLVVCGHHQDFWSKLMSSARQLINTVHVDMLIVPLRDEEE"
+ misc_feature complement(3989152..3989550)
+ /locus_tag="SARI_04047"
+ /note="Usp: Universal stress protein family. The universal
+ stress protein Usp is a small cytoplasmic bacterial
+ protein whose expression is enhanced when the cell is
+ exposed to stress agents. Usp enhances the rate of cell
+ survival during prolonged exposure to...; Region:
+ USP_Like; cd00293"
+ /db_xref="CDD:238182"
+ misc_feature complement(order(3989194..3989202,3989227..3989232,
+ 3989233..3989238,3989446..3989448,3989530..3989538))
+ /locus_tag="SARI_04047"
+ /note="Ligand Binding Site [chemical binding]; other site"
+ /db_xref="CDD:238182"
+ gene 3989954..3990289
+ /locus_tag="SARI_04048"
+ CDS 3989954..3990289
+ /locus_tag="SARI_04048"
+ /inference="similar to AA sequence:INSD:AAV79258.1"
+ /note="'ppGpp-dependent, membrane associated, stress
+ protein produced under conditions of nutrient deprivation,
+ osmotic shock and oxidative stress'"
+ /codon_start=1
+ /transl_table=11
+ /product="universal stress protein UspB"
+ /protein_id="YP_001572983.1"
+ /db_xref="GI:161505871"
+ /translation="MISTVSLFWALCVVCIVNMARYFSSLRALLVVLRGCDPLLYQYV
+ DGGGFFTTHGQPNKQMRLVWYIYAQRYRDHHDEEFIRRCERVRRQFLLTSALCGLVVV
+ SLIALMIWH"
+ misc_feature 3989954..3990286
+ /locus_tag="SARI_04048"
+ /note="universal stress protein UspB; Provisional; Region:
+ PRK04960"
+ /db_xref="CDD:235323"
+ gene complement(3990409..3991905)
+ /locus_tag="SARI_04049"
+ CDS complement(3990409..3991905)
+ /locus_tag="SARI_04049"
+ /inference="protein motif:HMMPanther:IPR001204"
+ /inference="protein motif:HMMPfam:IPR001204"
+ /inference="similar to AA sequence:INSD:AAX67424.1"
+ /note="'COG: COG0306 Phosphate/sulphate permeases;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572984.1"
+ /db_xref="GI:161505872"
+ /db_xref="InterPro:IPR001204"
+ /translation="MLHLFAGLDLHTGLLLLLALAFVLFYEAINGFHDTANAVATVIY
+ TRAMRSQLAVIMAAVFNFFGVLLGGLSVAYAIVHMLPTDLLLNMGSAHGLAMVFSMLL
+ AAIIWNLGTWYFGLPASSSHTLIGAIIGIGLTNAMMTGTSVVDALNIPKVINIFGSLI
+ ISPIVGLVFAGGLIFLLRRYWSGTKKRARIHLTPAEREKKDGKKKPPFWTRIALILSA
+ IGVAFSHGANDGQKGIGLVMLVLIGVAPAGFVVNMNASSYEITRTRDAINNVETYFEQ
+ RPDLLKAATGVDQLIPSPEPGATEPAEFHCHPANTINALNRAKGMLANVESYDKLSIE
+ QRSQLRRIMLCISDTTDKVVKLPGVSSDDQRLLKRLKTDMLSTIEYAPVWIIMAVALA
+ LGIGTMIGWRRVATTIGEKIGKKGMTYAQGMSAQMTAAVSIGLASYTGMPVSTTHVLS
+ SSVAGTMVVDGGGLQRKTVTSILMAWVFTLPAAIILSGVLYWLSLKII"
+ misc_feature complement(<3991153..3991830)
+ /locus_tag="SARI_04049"
+ /note="Phosphate/sulphate permeases [Inorganic ion
+ transport and metabolism]; Region: PitA; COG0306"
+ /db_xref="CDD:223383"
+ misc_feature complement(3990412..>3990771)
+ /locus_tag="SARI_04049"
+ /note="Phosphate/sulphate permeases [Inorganic ion
+ transport and metabolism]; Region: PitA; COG0306"
+ /db_xref="CDD:223383"
+ gene 3992136..3993332
+ /locus_tag="SARI_04050"
+ CDS 3992136..3993332
+ /locus_tag="SARI_04050"
+ /inference="protein motif:BlastProDom:IPR004792"
+ /inference="protein motif:HMMPfam:IPR004792"
+ /inference="protein motif:HMMTigr:IPR004792"
+ /inference="similar to AA sequence:REFSEQ:YP_218504.1"
+ /note="'KEGG: gox:GOX1717 3.0e-07 putative oxidoreductase
+ K00100;
+ COG: COG2081 Predicted flavoproteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572985.1"
+ /db_xref="GI:161505873"
+ /db_xref="InterPro:IPR004792"
+ /translation="MERFDAVIIGAGAAGMFCAAQAGQAGSRVLLIDNGKKPGRKILM
+ SGGGRCNFTNLYVDPAAYLSQNPHFCKSALARYTQWDFIDLVSRYGIAWHEKALGQLF
+ CDDSAQRIVDMLVAECDKGGVTMRLRSEVVSVAREASDFVLALNGETVATQKLVIASG
+ GLSMPGLGASPFGYKIAEQFGLKVLPTRAGLVPFTLHKPLLEQLQTLSGVSVPCVITA
+ RNGTVFRENLLFTHRGLSGPAILQISSYWQPGELVSINLMPDLSLDDVLNEQRNARPN
+ QSLKNTLAMHLPKRLVECLQQLGQIPDVTLRQLNVRDQQALVDTLTAWQVQPNGTEGY
+ RTAEVTLGGVDTNELSSRTMEARRVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQ
+ DLAAKR"
+ misc_feature 3992136..3993329
+ /locus_tag="SARI_04050"
+ /note="Predicted flavoproteins [General function
+ prediction only]; Region: COG2081"
+ /db_xref="CDD:224992"
+ gene 3993599..3993730
+ /locus_tag="SARI_04051"
+ CDS 3993599..3993730
+ /locus_tag="SARI_04051"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572986.1"
+ /db_xref="GI:161505874"
+ /translation="MLDNRDYGDSTPRESIPQAVHADDAFCQPCPTLLYRGAGFNIA"
+ gene complement(3993901..3994302)
+ /locus_tag="SARI_04052"
+ CDS complement(3993901..3994302)
+ /locus_tag="SARI_04052"
+ /inference="protein motif:HMMPfam:IPR002145"
+ /inference="protein motif:superfamily:IPR010985"
+ /inference="similar to AA sequence:SwissProt:Q57IP3"
+ /note="Inhibits transcription at high concentrations of
+ nickel"
+ /codon_start=1
+ /transl_table=11
+ /product="nickel responsive regulator"
+ /protein_id="YP_001572987.1"
+ /db_xref="GI:161505875"
+ /db_xref="InterPro:IPR002145"
+ /db_xref="InterPro:IPR010985"
+ /translation="MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRGALAQEA
+ TQEHGTYGFAVLSYVYEHEKRDLASRIVSTQHHHHELSVATLHVHINHDDCLEIAVLK
+ GDMGDVQHFADDVIAQRGVRHGHLQCLPKED"
+ misc_feature complement(3993904..3994302)
+ /locus_tag="SARI_04052"
+ /note="nickel responsive regulator; Provisional; Region:
+ PRK02967"
+ /db_xref="CDD:235093"
+ misc_feature complement(3993913..3994146)
+ /locus_tag="SARI_04052"
+ /note="NikR C terminal nickel binding domain; Region:
+ NikR_C; pfam08753"
+ /db_xref="CDD:204052"
+ gene complement(3994393..3994971)
+ /locus_tag="SARI_04053"
+ CDS complement(3994393..3994971)
+ /locus_tag="SARI_04053"
+ /inference="protein motif:HMMPfam:IPR008278"
+ /inference="protein motif:superfamily:IPR008278"
+ /inference="similar to AA sequence:INSD:CAD08047.1"
+ /note="'KEGG: sty:STY4228 4.2e-94 4'-phosphopantetheinyl
+ transferase K06133;
+ COG: COG2091 Phosphopantetheinyl transferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="holo-(acyl carrier protein) synthase 2"
+ /protein_id="YP_001572988.1"
+ /db_xref="GI:161505876"
+ /db_xref="InterPro:IPR008278"
+ /translation="MYRIVLGKVSTLSTGQLPDALIAQAPQGVRRASWLAGRVLLSRA
+ LSPLPEIVYGEQGKPAFSTGTPLWFNLSHSGDNIALLLSDEGEVGCDIEVIRPRDNWR
+ SLANAVFSLGEHAEMEAERPERQLAAFWRIWTRKEAIVKQRGGSAWQVVSVDSTLPSA
+ LSVSQCQLDTLSLAVCTPTPFTLTSLTITEVQ"
+ misc_feature complement(3994399..3994947)
+ /locus_tag="SARI_04053"
+ /note="holo-(acyl carrier protein) synthase 2;
+ Provisional; Region: PRK10351"
+ /db_xref="CDD:182399"
+ misc_feature complement(<3994510..3994710)
+ /locus_tag="SARI_04053"
+ /note="4'-phosphopantetheinyl transferase
+ superfamily; Region: ACPS; pfam01648"
+ /db_xref="CDD:216625"
+ gene complement(3995023..3996072)
+ /locus_tag="SARI_04054"
+ CDS complement(3995023..3996072)
+ /locus_tag="SARI_04054"
+ /inference="protein motif:HMMPfam:IPR002549"
+ /inference="similar to AA sequence:INSD:AAV79244.1"
+ /note="'KEGG: tbd:Tbd_2668 4.3e-11
+ phosphoribosylaminoimidazole-succinocarboxamide (SAICAR)
+ synthetase K01923;
+ COG: COG0628 Predicted permease;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572989.1"
+ /db_xref="GI:161505877"
+ /db_xref="InterPro:IPR002549"
+ /translation="MTTAQSDKTGMHILLKLASLVVILAGIHAAADIIVQLLLALFFA
+ IVLNPLVTWFIRRGMKRPLAITIVVVVMLIVLTALVGVLAASLNEFIAMLPKYSKELT
+ RRVLHLQELMPFLNLHMSPERMLRGMDSDKIMLFTTTLMTGVSGAMASIVLLVMTVVF
+ MLFEVRHVPYKLRFALNNPQIHIAGLHRALKGVSHYLALKTLLSLWTGAIIWLGLALM
+ DIQFALMWGVLAFLLNYVPNIGSVISAVPPMIQALLFNGFYECVLVGALFLVVHMVIG
+ NIMEPRMMGHRLGMSTLVVFLSLLVWGWLLGPVGMLLSVPLTSVCKIWMETTKGGSKL
+ AILLGPGRPKSRLPG"
+ misc_feature complement(3995041..3996045)
+ /locus_tag="SARI_04054"
+ /note="Predicted permease, member of the PurR regulon
+ [General function prediction only]; Region: yhhT; cl00465"
+ /db_xref="CDD:241882"
+ misc_feature complement(3995086..3996036)
+ /locus_tag="SARI_04054"
+ /note="Domain of unknown function DUF20; Region: UPF0118;
+ pfam01594"
+ /db_xref="CDD:216594"
+ gene 3996203..3997140
+ /locus_tag="SARI_04055"
+ /note="Pseudogene compared to gi|39546370|ref|NP_462482.2|
+ hypothetical protein STM3581.S [Salmonella typhimurium
+ LT2]"
+ gene complement(3997146..3997703)
+ /locus_tag="SARI_04056"
+ CDS complement(3997146..3997703)
+ /locus_tag="SARI_04056"
+ /inference="similar to AA sequence:REFSEQ:YP_152554.1"
+ /note="'COG: NOG07879 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572990.1"
+ /db_xref="GI:161505878"
+ /translation="MRNLVKYAGIGLLVMGLAACDNNNTKAPAEGAAAKSQASGQPVS
+ LMQGKLSFSLPADMTDQSGKLGTQANNMHVYSDPTGQKAVIVIVGDDTNEALSVLANR
+ LLEQQRSRDPQLQVVTNKSIELKGHTLQQLDSIISAKGQTAYSSIVLGKVDNQLLTIQ
+ VTLPADDQQKAQTTAENIINTLVIK"
+ misc_feature complement(3997149..3997703)
+ /locus_tag="SARI_04056"
+ /note="hypothetical protein; Provisional; Region:
+ PRK11615"
+ /db_xref="CDD:183232"
+ gene complement(3997776..3998516)
+ /locus_tag="SARI_04057"
+ CDS complement(3997776..3998516)
+ /locus_tag="SARI_04057"
+ /inference="protein motif:HMMPfam:IPR003744"
+ /inference="protein motif:HMMTigr:IPR003744"
+ /inference="similar to AA sequence:REFSEQ:YP_218495.1"
+ /note="'COG: COG1738 Uncharacterized conserved protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572991.1"
+ /db_xref="GI:161505879"
+ /db_xref="InterPro:IPR003744"
+ /translation="MPAQNSIMRRFFIGFPHPIQQKGHNMTPFTQSQRIKALFWLSLF
+ HLLVIISSNYLVQLPITIFGFHTTWGAFSFPFIFLATDLTVRIFGAPLARRIIFAVMI
+ PALLVSYVVSSLFYTGAWQGFAALANFNLFVARIAAASFMAYALGQILDVHVFNRLRQ
+ NRRWWLAPTASTLFGNISDTLAFFFIAFWRSPDAFMAEHWMEIALVDYCFKVLISIIF
+ FLPMYGVLLNMLLKKLADKSEISALQPS"
+ misc_feature complement(3997812..3998441)
+ /locus_tag="SARI_04057"
+ /note="hypothetical protein; Provisional; Region:
+ PRK11212"
+ /db_xref="CDD:183041"
+ gene 3998521..3998856
+ /locus_tag="SARI_04058"
+ CDS 3998521..3998856
+ /locus_tag="SARI_04058"
+ /inference="protein motif:HMMPfam:IPR001455"
+ /inference="protein motif:ScanRegExp:IPR001455"
+ /inference="similar to AA sequence:REFSEQ:YP_218494.1"
+ /note="'COG: COG0425 Predicted redox protein, regulator of
+ disulfide bond formation;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572992.1"
+ /db_xref="GI:161505880"
+ /db_xref="InterPro:IPR001455"
+ /translation="MANFHAIVNLPGLLTKMGVKYRRFFTIETKMSDLFFSPDHTLDA
+ LGLRCPEPVMMVRKTVRSMQTGETLLIIADDPATTRDIPGFCTFMEHELLAQETEGLP
+ YRYLLRKAH"
+ misc_feature 3998641..3998847
+ /locus_tag="SARI_04058"
+ /note="SirA (also known as UvrY, and YhhP) belongs to a
+ family of two-component response regulators that controls
+ secondary metabolism and virulence. The other member of
+ this two-component system is a sensor kinase called BarA
+ which phosphorylates SirA. A...; Region: SirA; cd03423"
+ /db_xref="CDD:239515"
+ misc_feature order(3998644..3998649,3998656..3998658,3998665..3998676,
+ 3998680..3998682)
+ /locus_tag="SARI_04058"
+ /note="CPxP motif; other site"
+ /db_xref="CDD:239515"
+ gene complement(3998883..4000522)
+ /locus_tag="SARI_04059"
+ /note="Pseudogene compared to gi|16766863|ref|NP_462478.1|
+ methyl-accepting transmembrane citrate/phenol
+ chemoreceptor [Salmonella typhimurium LT2]"
+ gene complement(4000718..4002916)
+ /gene="zntA"
+ /locus_tag="SARI_04060"
+ CDS complement(4000718..4002916)
+ /gene="zntA"
+ /locus_tag="SARI_04060"
+ /inference="protein motif:HMMPanther:IPR001757"
+ /inference="protein motif:HMMPfam:IPR005834"
+ /inference="protein motif:HMMPfam:IPR006121"
+ /inference="protein motif:HMMPfam:IPR008250"
+ /inference="protein motif:HMMTigr:IPR001757"
+ /inference="protein motif:HMMTigr:IPR006404"
+ /inference="protein motif:HMMTigr:IPR006416"
+ /inference="protein motif:ScanRegExp:IPR000150"
+ /inference="protein motif:ScanRegExp:IPR001757"
+ /inference="protein motif:ScanRegExp:IPR001969"
+ /inference="protein motif:ScanRegExp:IPR006121"
+ /inference="protein motif:superfamily:IPR006121"
+ /note="'P-type ATPase involved in the export of lead,
+ cadmium, zinc and mercury'"
+ /codon_start=1
+ /transl_table=11
+ /product="zinc/cadmium/mercury/lead-transporting ATPase"
+ /protein_id="YP_001572993.2"
+ /db_xref="GI:448236289"
+ /db_xref="InterPro:IPR000150"
+ /db_xref="InterPro:IPR001757"
+ /db_xref="InterPro:IPR001969"
+ /db_xref="InterPro:IPR005834"
+ /db_xref="InterPro:IPR006121"
+ /db_xref="InterPro:IPR006404"
+ /db_xref="InterPro:IPR006416"
+ /db_xref="InterPro:IPR008250"
+ /translation="MSTPDADGKKVPPFSSFRLAPATQKADSCCCEEHCITSAPVSTA
+ VAGTRYIWKIAGMDCAACARKVENAVRQIRGVNQAQVLFATEKLVVDADVDLRAQIER
+ AVQKAGYTLHSEDSRDAAPESRLKENLPLITLIIMIAISWGLEQFNHPFGQLAFIATT
+ LVGLYPIARQALRLMKSGSWFAIETLMSVAAIGALFIGATAEAAMVLLLFLIGERLEG
+ WAASRARKGVSALMALKPETATRLRHDVREEVAINTLRPGDIIEVAAGGRLPADGKLV
+ SGFASFDESALTGESIPVERATGDKVPAGATSVDRLVTLEVLSEPGASAIDRILTLIE
+ EAEERRAPIERFIDRFSRIYTPVIMVIALLVTLIPPLMFDGGWQEWIYKGLTLLLIGC
+ PCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRITQVAFDKTGTLTVGKPRVTA
+ IHPASGVGDAELLALAAAVEQGATHPLAQAIVREAQTRDLAIPTAESQRTLAGTGIEA
+ QVNGERILICAAGKQPAAAFAGQISELENAGQTVVMVLRNETVLGILALQDTLRDDAR
+ DAIRELHQLGVNGVILTGDNPRAAAAIAGELDLAFNAGLLPEDKVQAVTVLNQQAPLA
+ MVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMITLARATHANI
+ RQNITIALGLKAIFLVTTLLGFTGLWLAILADTGATVLVTANALRLLRKK"
+ misc_feature complement(4000721..4002916)
+ /gene="zntA"
+ /locus_tag="SARI_04060"
+ /note="zinc/cadmium/mercury/lead-transporting ATPase;
+ Provisional; Region: zntA; PRK11033"
+ /db_xref="CDD:236827"
+ misc_feature complement(4002581..4002760)
+ /gene="zntA"
+ /locus_tag="SARI_04060"
+ /note="Heavy-metal-associated domain (HMA) is a conserved
+ domain of approximately 30 amino acid residues found in a
+ number of proteins that transport or detoxify heavy
+ metals, for example, the CPx-type heavy metal ATPases and
+ copper chaperones. HMA domain...; Region: HMA; cd00371"
+ /db_xref="CDD:238219"
+ misc_feature complement(order(4002731..4002733,4002740..4002748))
+ /gene="zntA"
+ /locus_tag="SARI_04060"
+ /note="metal-binding site [ion binding]"
+ /db_xref="CDD:238219"
+ misc_feature complement(4001702..4002304)
+ /gene="zntA"
+ /locus_tag="SARI_04060"
+ /note="E1-E2 ATPase; Region: E1-E2_ATPase; pfam00122"
+ /db_xref="CDD:215733"
+ gene complement(4002997..4003623)
+ /locus_tag="SARI_04061"
+ CDS complement(4002997..4003623)
+ /locus_tag="SARI_04061"
+ /inference="protein motif:HMMPfam:IPR012506"
+ /inference="similar to AA sequence:INSD:AAL22435.1"
+ /note="'COG: COG3714 Predicted membrane protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572994.1"
+ /db_xref="GI:161505882"
+ /db_xref="InterPro:IPR012506"
+ /translation="MLWSFIAVCLSAWLYVDASYRGPAWQRWVFKPVTLLLLLLLAWQ
+ APMFDAISYLVLAGLCASLLGDALTLLPRQRLLYAVGAFFLSHLLYTIYFASQMTLSF
+ FWPLPLVLLIVGALLIAVIWTRLEELRWPVGTFIAMTLVMVWLAGELWFFRPTAPALS
+ AFTGATLLFIGNIVWLGSHYRRRFRADNAIAAACYFAGHFLIVRSLYL"
+ misc_feature complement(4003000..4003623)
+ /locus_tag="SARI_04061"
+ /note="Predicted membrane protein [Function unknown];
+ Region: COG3714"
+ /db_xref="CDD:226237"
+ gene 4003765..4004136
+ /locus_tag="SARI_04062"
+ CDS 4003765..4004136
+ /locus_tag="SARI_04062"
+ /inference="similar to AA sequence:INSD:AAL22434.1"
+ /note="'COG: NOG09778 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572995.1"
+ /db_xref="GI:161505883"
+ /translation="MSKPPLFFIVIIALIVVAASFRFVQQRREKAANDAAPLRQKQVV
+ VSNKREKPVNDRRSRQQEVTPAGVSMRYEVSFKPQSGGLEMTFRLDAQQYHALTVGDK
+ GTLSYKGTRFVEFVVRSPDNG"
+ misc_feature 4003822..4004112
+ /locus_tag="SARI_04062"
+ /note="Protein of unknown function (DUF2500); Region:
+ DUF2500; pfam10694"
+ /db_xref="CDD:151190"
+ gene complement(4004158..4004430)
+ /locus_tag="SARI_04063"
+ CDS complement(4004158..4004430)
+ /locus_tag="SARI_04063"
+ /inference="protein motif:HMMPfam:IPR009525"
+ /inference="similar to AA sequence:REFSEQ:YP_152547.1"
+ /note="'COG: COG3776 Predicted membrane protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001572996.1"
+ /db_xref="GI:161505884"
+ /db_xref="InterPro:IPR009525"
+ /translation="MMLINLGRLLMLFVWAFLILNLVQPFPRPLNIFVNVALVFMALM
+ HGMQLALLKSTIPKDGPQMTTGEKIRIFLFGVFELLVWQKKFKAQK"
+ misc_feature complement(4004161..4004427)
+ /locus_tag="SARI_04063"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10910"
+ /db_xref="CDD:182831"
+ gene complement(4004417..4005046)
+ /gene="rsmD"
+ /locus_tag="SARI_04064"
+ CDS complement(4004417..4005046)
+ /gene="rsmD"
+ /locus_tag="SARI_04064"
+ /inference="protein motif:HMMPfam:IPR004398"
+ /inference="protein motif:HMMTigr:IPR004398"
+ /inference="protein motif:ScanRegExp:IPR002052"
+ /inference="similar to AA sequence:INSD:CAD08058.1"
+ /note="catalyzes the methylation of 16S rRNA at position
+ G966"
+ /codon_start=1
+ /transl_table=11
+ /product="16S rRNA m(2)G966-methyltransferase"
+ /protein_id="YP_001572997.1"
+ /db_xref="GI:161505885"
+ /db_xref="InterPro:IPR002052"
+ /db_xref="InterPro:IPR004398"
+ /translation="MTCNGRFEQLLMKKTNHSGSGQIRIIGGQWRGRKLPVPDSPGLR
+ PTTDRVRETLFNWLAPVMVDARCLDCFAGSGALGLEALSRYAADATLLEMDRAVSQQL
+ QKNLATLKAANARVVNANTLAFLAQPGTPHHVVFVDPPFRKGLLEETLQLLETKGWLA
+ DDALIYVESEVENGLPPVPANWALYREKVAGQVAYRLYQRDAQGENDAD"
+ misc_feature complement(4004441..4004947)
+ /gene="rsmD"
+ /locus_tag="SARI_04064"
+ /note="N6-adenine-specific methylase [DNA replication,
+ recombination, and repair]; Region: COG0742"
+ /db_xref="CDD:223813"
+ misc_feature complement(<4004624..4004851)
+ /gene="rsmD"
+ /locus_tag="SARI_04064"
+ /note="S-adenosylmethionine-dependent methyltransferases
+ (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
+ that use S-adenosyl-L-methionine (SAM or AdoMet) as a
+ substrate for methyltransfer, creating the product
+ S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
+ cd02440"
+ /db_xref="CDD:100107"
+ misc_feature complement(order(4004633..4004635,4004684..4004692,
+ 4004765..4004770,4004819..4004839))
+ /gene="rsmD"
+ /locus_tag="SARI_04064"
+ /note="S-adenosylmethionine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:100107"
+ gene 4005132..4006625
+ /locus_tag="SARI_04065"
+ CDS 4005132..4006625
+ /locus_tag="SARI_04065"
+ /inference="protein motif:BlastProDom:IPR000897"
+ /inference="protein motif:Gene3D:IPR013822"
+ /inference="protein motif:HMMPfam:IPR000897"
+ /inference="protein motif:HMMPfam:IPR013822"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR004390"
+ /inference="protein motif:ScanRegExp:IPR000897"
+ /inference="protein motif:superfamily:IPR013822"
+ /inference="similar to AA sequence:INSD:"
+ /note="signal recognition protein receptor; functions in
+ the targeting and insertion of membrane proteins"
+ /codon_start=1
+ /transl_table=11
+ /product="cell division protein FtsY"
+ /protein_id="YP_001572998.1"
+ /db_xref="GI:161505886"
+ /db_xref="InterPro:IPR000897"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR004390"
+ /db_xref="InterPro:IPR013822"
+ /translation="MKQQRGVWSQMAKEKKRGFFSWLGFGQKEQAPENETEVKNEDKQ
+ SVVEEAAAVHAPKTHTEAESEAFAAEVVDVTEQVAESEKQPSQPEPTVVAAAIEREEL
+ PLPEDVSQQAVEEAQVETISPQEWQAEAETVEVIEAVEEEGEKAAKFTDEELEAQALA
+ AQATEDAVMVVPVAEEETPVEAIAQEQEKPTKEGFFARLKRSLLKTKENLGSGFISLF
+ RGKKIDDDLFEELEEQLLIADVGVETTRKIIANLTEGASRKQLKDAEALYGLLKDEMG
+ EILAKVDEPLTIEGKTPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRA
+ AAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAAKARNVDVLIADTAGRLQNKSH
+ LMEELKKIVRVMKKLDEEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGITLTKLDG
+ TAKGGVIFSVADQFGIPIRYIGVGERIEDLRPFKADDFIEALFARED"
+ misc_feature 4005687..4006622
+ /locus_tag="SARI_04065"
+ /note="signal recognition particle-docking protein FtsY;
+ Provisional; Region: PRK10416"
+ /db_xref="CDD:236686"
+ misc_feature 4005726..4005956
+ /locus_tag="SARI_04065"
+ /note="SRP54-type protein, helical bundle domain; Region:
+ SRP54_N; pfam02881"
+ /db_xref="CDD:217266"
+ misc_feature 4006011..4006547
+ /locus_tag="SARI_04065"
+ /note="The signal recognition particle (SRP) mediates the
+ transport to or across the plasma membrane in bacteria and
+ the endoplasmic reticulum in eukaryotes. SRP recognizes
+ N-terminal sighnal sequences of newly synthesized
+ polypeptides at the ribosome. The...; Region: SRP;
+ cd03115"
+ /db_xref="CDD:239389"
+ misc_feature 4006029..4006052
+ /locus_tag="SARI_04065"
+ /note="P loop; other site"
+ /db_xref="CDD:239389"
+ misc_feature order(4006119..4006121,4006284..4006286,4006467..4006469,
+ 4006476..4006481)
+ /locus_tag="SARI_04065"
+ /note="GTP binding site [chemical binding]; other site"
+ /db_xref="CDD:239389"
+ gene 4006628..4007296
+ /locus_tag="SARI_04066"
+ CDS 4006628..4007296
+ /locus_tag="SARI_04066"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR005286"
+ /inference="protein motif:HMMTigr:IPR013505"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:INSD:CAD08060.1"
+ /note="'putative ATP-binding protein of an ATP-binding
+ cassette transporter; when bound to FtsX, FtsEX localizes
+ to the cell division site and plays a role in the assembly
+ or stability of the septal ring under low-salt growth
+ conditions'"
+ /codon_start=1
+ /transl_table=11
+ /product="cell division protein FtsE"
+ /protein_id="YP_001572999.1"
+ /db_xref="GI:161505887"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR005286"
+ /db_xref="InterPro:IPR013505"
+ /translation="MIRFEHVSKAYLGGRQALQGVTFHMQPGEMAFLTGHSGAGKSTL
+ LKLICGIERPSAGKIFFSGHDITRLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAI
+ PLIIAGASGDDIRRRVSAALDKVGLLDKARNFPIQLSGGEQQRVGIARAVVNKPAVLL
+ ADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRQLILSDGHLHGG
+ LVNE"
+ misc_feature 4006628..4007293
+ /locus_tag="SARI_04066"
+ /note="cell division protein FtsE; Provisional; Region:
+ PRK10908"
+ /db_xref="CDD:182829"
+ misc_feature 4006631..4007272
+ /locus_tag="SARI_04066"
+ /note="ATP-binding cassette transporter nucleotide-binding
+ domain; Region: ABC_ATPase; cl17201"
+ /db_xref="CDD:247755"
+ misc_feature 4006730..4006753
+ /locus_tag="SARI_04066"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature order(4006739..4006744,4006748..4006756,4006883..4006885,
+ 4007111..4007116,4007210..4007212)
+ /locus_tag="SARI_04066"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213179"
+ misc_feature 4006874..4006885
+ /locus_tag="SARI_04066"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213179"
+ misc_feature 4007039..4007068
+ /locus_tag="SARI_04066"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213179"
+ misc_feature 4007099..4007116
+ /locus_tag="SARI_04066"
+ /note="Walker B; other site"
+ /db_xref="CDD:213179"
+ misc_feature 4007123..4007134
+ /locus_tag="SARI_04066"
+ /note="D-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature 4007198..4007218
+ /locus_tag="SARI_04066"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213179"
+ gene 4007289..4008347
+ /gene="ftsX"
+ /locus_tag="SARI_04067"
+ CDS 4007289..4008347
+ /gene="ftsX"
+ /locus_tag="SARI_04067"
+ /inference="protein motif:HMMPfam:IPR003838"
+ /inference="protein motif:HMMTigr:IPR004513"
+ /inference="similar to AA sequence:INSD:AAL22429.1"
+ /note="'putative ABC transporter, membrane protein'"
+ /codon_start=1
+ /transl_table=11
+ /product="cell division protein FtsX"
+ /protein_id="YP_001573000.1"
+ /db_xref="GI:161505888"
+ /db_xref="InterPro:IPR003838"
+ /db_xref="InterPro:IPR004513"
+ /translation="MNRRDAINQIRQFGGRLDRLRKPGGGTGDGGRHAPRRQKPTPKP
+ SSRKTNVFNEQVRYAWHGALQDLKSKPLATFLTVMVIAISLTLPSVCYMVYKNVNQAA
+ TQYYPSPQITVYLQKTLDDDAAARVVGQLQAEQGVEKVNYLSREDALGEFRNWSGFGG
+ ALDMLEENPLPAVAVVIPKLDFQSTASLNTLRDRISQINGIDEVRMDDSWFARLAALT
+ GLVGRVSAMIGVLMVAAVFLVIGNSVRLSIFARRDTINVQKLIGATDGFILRPFLYGG
+ ALLGFSGAFLSLILSEILVMRLSSAVTEVAQVFGTKFDLNGLSFDECLLLLLVCSMIG
+ WIAAWLATVQHLRHFTPD"
+ misc_feature 4007421..4008341
+ /gene="ftsX"
+ /locus_tag="SARI_04067"
+ /note="putative protein insertion permease FtsX; Region:
+ ftsX; TIGR00439"
+ /db_xref="CDD:129531"
+ misc_feature 4007433..4008344
+ /gene="ftsX"
+ /locus_tag="SARI_04067"
+ /note="cell division ABC transporter subunit FtsX;
+ Provisional; Region: ftsX; PRK11026"
+ /db_xref="CDD:182910"
+ gene 4008593..4009447
+ /locus_tag="SARI_04068"
+ CDS 4008593..4009447
+ /locus_tag="SARI_04068"
+ /inference="protein motif:FPrintScan:IPR000943"
+ /inference="protein motif:HMMPfam:IPR007627"
+ /inference="protein motif:HMMPfam:IPR007630"
+ /inference="protein motif:HMMTigr:IPR012759"
+ /inference="protein motif:ScanRegExp:IPR000943"
+ /inference="protein motif:superfamily:IPR013324"
+ /inference="protein motif:superfamily:IPR013325"
+ /inference="similar to AA sequence:INSD:AAO71425.1"
+ /note="binds with the catalytic core of RNA polymerase to
+ produce the holoenzyme; this sigma factor is responsible
+ for the expression of heat shock promoters"
+ /codon_start=1
+ /transl_table=11
+ /product="RNA polymerase factor sigma-32"
+ /protein_id="YP_001573001.1"
+ /db_xref="GI:161505889"
+ /db_xref="InterPro:IPR000943"
+ /db_xref="InterPro:IPR007627"
+ /db_xref="InterPro:IPR007630"
+ /db_xref="InterPro:IPR012759"
+ /db_xref="InterPro:IPR013324"
+ /db_xref="InterPro:IPR013325"
+ /translation="MTKEMQNLALAPVGNLESYIRAANAWPMLSADEERALAERLHYQ
+ GDLEAAKTLILSHLRFVVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLV
+ SFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKAKQRLGWFNQDEVEMVARE
+ LGVSSKDVREMESRMAAQDMTFDMSSDDESDSQPMAPVLYLQDKSSNFADGIEDDNWE
+ EQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMK
+ KLRAAIEA"
+ misc_feature 4008593..4009444
+ /locus_tag="SARI_04068"
+ /note="RNA polymerase factor sigma-32; Reviewed; Region:
+ PRK06596"
+ /db_xref="CDD:235838"
+ misc_feature 4008749..4008961
+ /locus_tag="SARI_04068"
+ /note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542"
+ /db_xref="CDD:218138"
+ misc_feature 4009259..4009429
+ /locus_tag="SARI_04068"
+ /note="Sigma70, region (SR) 4 refers to the most
+ C-terminal of four conserved domains found in Escherichia
+ coli (Ec) sigma70, the main housekeeping sigma, and
+ related sigma-factors (SFs). A SF is a dissociable subunit
+ of RNA polymerase, it directs bacterial or...; Region:
+ Sigma70_r4; cd06171"
+ /db_xref="CDD:100119"
+ misc_feature order(4009289..4009291,4009319..4009321,4009346..4009351,
+ 4009379..4009381,4009385..4009390,4009394..4009402,
+ 4009406..4009411,4009415..4009417)
+ /locus_tag="SARI_04068"
+ /note="DNA binding residues [nucleotide binding]"
+ /db_xref="CDD:100119"
+ gene 4009692..4010810
+ /locus_tag="SARI_04069"
+ CDS 4009692..4010810
+ /locus_tag="SARI_04069"
+ /inference="protein motif:FPrintScan:IPR000709"
+ /inference="protein motif:HMMPfam:IPR001828"
+ /inference="similar to AA sequence:INSD:AAX67402.1"
+ /note="'KEGG: ava:Ava_2791 0.0046 serine/threonine protein
+ kinase K00903;
+ COG: COG0683 ABC-type branched-chain amino acid transport
+ systems, periplasmic component;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573002.1"
+ /db_xref="GI:161505890"
+ /db_xref="InterPro:IPR000709"
+ /db_xref="InterPro:IPR001828"
+ /translation="MGIIRMNMKGKTLLAGCIALSLSHMAFADDIKVAVVGAMSGPVA
+ QYGDQEFTGAEQAIADINAKGGIKGDKLVAVKYDDACDPKQAVAVANKVVNDGIKYVI
+ GHLCSSSTQPASDIYEDEGILMITPAATAPELTARGYNLILRTTGLDSDQGPTAAKYI
+ LETMKPQRIAIIHDKQQYGEGLARAVQDGLKKGGANVVFFDGITAGEKDFSTLMARLK
+ KENIDFVYYGGYHPEMGQILRQSRAAGLKTQFMGPEGVANVSLSNIAGESAEGMLVTK
+ PKNYDQVPANKPIVDAIKAKKQDPSGAFVWTTYAALQSLQAGLNQSDDPAEIAKYLKG
+ ATVDTVMGPLSWDEKGDLKGFEFGVFTWHANGTATDAK"
+ misc_feature 4009752..4010789
+ /locus_tag="SARI_04069"
+ /note="ABC-type branched-chain amino acid transport
+ systems, periplasmic component [Amino acid transport and
+ metabolism]; Region: LivK; COG0683"
+ /db_xref="CDD:223755"
+ misc_feature 4009785..4010777
+ /locus_tag="SARI_04069"
+ /note="Type I periplasmic ligand-binding domain of ABC
+ (Atpase Binding Cassette)-type active transport systems
+ that are involved in the transport of all three branched
+ chain aliphatic amino acids (leucine, isoleucine and
+ valine); Region: PBP1_ABC_LIVBP_like; cd06342"
+ /db_xref="CDD:107337"
+ misc_feature order(4009806..4009808,4009833..4009835,4009845..4009847,
+ 4009854..4009856,4010406..4010408,4010469..4010471,
+ 4010478..4010480,4010487..4010492,4010580..4010582)
+ /locus_tag="SARI_04069"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:107337"
+ misc_feature order(4010004..4010012,4010073..4010078,4010223..4010225,
+ 4010379..4010381,4010451..4010453)
+ /locus_tag="SARI_04069"
+ /note="ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:107337"
+ gene complement(4010854..4011237)
+ /locus_tag="SARI_04070"
+ CDS complement(4010854..4011237)
+ /locus_tag="SARI_04070"
+ /inference="protein motif:HMMPfam:IPR000182"
+ /inference="similar to AA sequence:REFSEQ:NP_458355.1"
+ /note="'KEGG: reh:H16_B0069 7.0e-05 acetyltransferase
+ K00680;
+ COG: NOG09777 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573003.1"
+ /db_xref="GI:161505891"
+ /db_xref="InterPro:IPR000182"
+ /translation="MKLTILRLEHFSAQDQIDLGKIWPEYSASSLSVDETHRIYAARF
+ NERLLGAVRVTLSGTQGALDSLRVREITRRRGVGQYLVEEVIRDNPNVSSWWMADVGV
+ EDRGVMAAFMQALGFTAQHDGWEKR"
+ misc_feature complement(4010863..4011234)
+ /locus_tag="SARI_04070"
+ /note="Acetyltransferase (GNAT) domain; Region: DUF3749;
+ pfam12568"
+ /db_xref="CDD:204966"
+ gene 4011660..4012769
+ /locus_tag="SARI_04071"
+ CDS 4011660..4012769
+ /locus_tag="SARI_04071"
+ /inference="protein motif:HMMPfam:IPR001828"
+ /inference="similar to AA sequence:INSD:AAV79226.1"
+ /note="'KEGG: aci:ACIAD3368 0.00051 mraW;
+ S-adenosylmeTHIonine methyltransferase K03438;
+ COG: COG0683 ABC-type branched-chain amino acid transport
+ systems, periplasmic component;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573004.1"
+ /db_xref="GI:161505892"
+ /db_xref="InterPro:IPR001828"
+ /translation="MKRKAKTIIAGIVALAVTQGAMADDIKVAVVGAMSGPVAQWGDM
+ EFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIQYVIGHLCS
+ SSTQPASDIYEDEGILMISPGATNPELTQRGYQYIMRTAGLDSSQGPTAAKYILETVK
+ PQRIAIIHDKQQYGEGLARSVQDGLKQGNANIVFFDGITAGEKDFSALIARLQKENID
+ FVYYGGYYPEMGQMLRQARANGLKTQFMGPEGVGNASLSNIAGSAAEGMLVTMPKRYD
+ QDPANKAIVEALKADKKDPSGPYVWITYAAVQSLATAMDRSASHVPLDLVKDLKANGA
+ DTVIGPLKWDEKGDLKGFEFGVFQWHADGSSTPAK"
+ misc_feature 4011705..4012748
+ /locus_tag="SARI_04071"
+ /note="ABC-type branched-chain amino acid transport
+ systems, periplasmic component [Amino acid transport and
+ metabolism]; Region: LivK; COG0683"
+ /db_xref="CDD:223755"
+ misc_feature 4011738..4012736
+ /locus_tag="SARI_04071"
+ /note="Type I periplasmic ligand-binding domain of ABC
+ (Atpase Binding Cassette)-type active transport systems
+ that are involved in the transport of all three branched
+ chain aliphatic amino acids (leucine, isoleucine and
+ valine); Region: PBP1_ABC_LIVBP_like; cd06342"
+ /db_xref="CDD:107337"
+ misc_feature order(4011759..4011761,4011786..4011788,4011798..4011800,
+ 4011807..4011809,4012359..4012361,4012422..4012424,
+ 4012431..4012433,4012440..4012445,4012533..4012535)
+ /locus_tag="SARI_04071"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:107337"
+ misc_feature order(4011957..4011965,4012026..4012031,4012176..4012178,
+ 4012332..4012334,4012404..4012406)
+ /locus_tag="SARI_04071"
+ /note="ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:107337"
+ gene 4012830..4013756
+ /locus_tag="SARI_04072"
+ CDS 4012830..4013756
+ /locus_tag="SARI_04072"
+ /inference="protein motif:HMMPfam:IPR001851"
+ /inference="protein motif:superfamily:IPR009001"
+ /inference="similar to AA sequence:INSD:AAV79225.1"
+ /note="LivHMGF is the membrane component of the LIV-I/LS
+ branched-chain amino acid transporter"
+ /codon_start=1
+ /transl_table=11
+ /product="branched-chain amino acid transporter permease
+ subunit LivH"
+ /protein_id="YP_001573005.1"
+ /db_xref="GI:161505893"
+ /db_xref="InterPro:IPR001851"
+ /db_xref="InterPro:IPR009001"
+ /translation="MSEQFLYFLQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHG
+ EVYMIGSYVSFMIIAALMMMGIDTSWLLVAAGFIGAIIVASAYGWSIERVAYRPVRNS
+ KRLIALISAIGMSIFLQNYVSLTEGSRDVALPSLFNGQWMVGSSENFSASITTMQAVI
+ WIVTFLAMLALTIFIRYSRMGRACRACAEDLKMASLLGINTDRVIALTFVIGAAMAAV
+ AGVLLGQFYGVINPYIGFMAGMKAFTAAVLGGIGSIPGAMIGGLILGVAEALSSAYLS
+ TEYKDVVSFALLILVLLVMPTGILGRPEVEKV"
+ misc_feature 4012860..4013705
+ /locus_tag="SARI_04072"
+ /note="Branched-chain amino acid transport system /
+ permease component; Region: BPD_transp_2; pfam02653"
+ /db_xref="CDD:217165"
+ misc_feature 4012872..4013729
+ /locus_tag="SARI_04072"
+ /note="Transmembrane subunit (TM) of Escherichia coli LivH
+ and related proteins. LivH is one of two TMs of the E.
+ coli LIV-1/LS transporter, a Periplasmic Binding Protein
+ (PBP)-dependent ATP-Binding Cassette (ABC) transporter
+ involved in the uptake of...; Region: TM_PBP1_LivH_like;
+ cd06582"
+ /db_xref="CDD:119324"
+ misc_feature 4013403..4013459
+ /locus_tag="SARI_04072"
+ /note="TM-ABC transporter signature motif; other site"
+ /db_xref="CDD:119324"
+ gene 4013753..4015030
+ /gene="livM"
+ /locus_tag="SARI_04073"
+ CDS 4013753..4015030
+ /gene="livM"
+ /locus_tag="SARI_04073"
+ /inference="protein motif:HMMPfam:IPR001851"
+ /inference="similar to AA sequence:REFSEQ:NP_462463.1"
+ /note="'Part of the ABC transporter complex LivFGHMJ and
+ LivFGHMK involved in the high-affinity transport of
+ branched-chain amino acids; LivFGHMK is specific for the
+ transport of leucine, while LivFGHMJ is a transporter for
+ leucine, isoleucine, and valine'"
+ /codon_start=1
+ /transl_table=11
+ /product="leucine/isoleucine/valine transporter permease
+ subunit"
+ /protein_id="YP_001573006.1"
+ /db_xref="GI:161505894"
+ /db_xref="InterPro:IPR001851"
+ /translation="MKPMHIAMALFSAVMFFVLAGVFMGVQLELDGTKLVVDTAADIR
+ WQWIFIGTAVVFFFQLLRPMFQKALKNVSGPKFILPAIDGSTLKQKLFLIALLIIAVA
+ WPFMVSRGSVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYY
+ GLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGG
+ PNGISQIPKPTLFGLEFSRSAREGGWDTFSNFFGVKYDPSDRVIFLYLVALLLVVLSL
+ FVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLFAARQ
+ GFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEYSMLMLGG
+ LMVLMMIWRPQGLLPMTRPQLKLKSGQAKGEQA"
+ misc_feature 4013753..4015009
+ /gene="livM"
+ /locus_tag="SARI_04073"
+ /note="leucine/isoleucine/valine transporter permease
+ subunit; Provisional; Region: livM; PRK11301"
+ /db_xref="CDD:236896"
+ misc_feature 4013756..4014016
+ /gene="livM"
+ /locus_tag="SARI_04073"
+ /note="Domain of unknown function (DUF3382); Region:
+ DUF3382; pfam11862"
+ /db_xref="CDD:221276"
+ misc_feature 4014185..4014973
+ /gene="livM"
+ /locus_tag="SARI_04073"
+ /note="Transmembrane subunit (TM) of Escherichia coli LivM
+ and related proteins. LivM is one of two TMs of the E.
+ coli LIV-1/LS transporter, a Periplasmic Binding Protein
+ (PBP)-dependent ATP-Binding Cassette (ABC) transporter
+ involved in the uptake of...; Region: TM_PBP1_LivM_like;
+ cd06581"
+ /db_xref="CDD:119323"
+ misc_feature 4014647..4014703
+ /gene="livM"
+ /locus_tag="SARI_04073"
+ /note="TM-ABC transporter signature motif; other site"
+ /db_xref="CDD:119323"
+ gene 4015027..4015794
+ /gene="livG"
+ /locus_tag="SARI_04074"
+ CDS 4015027..4015794
+ /gene="livG"
+ /locus_tag="SARI_04074"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:INSD:CAD08069.1"
+ /note="'Part of the ABC transporter complexes LivFGHMJ and
+ LivFGHMK involved in the high-affinity transport of
+ branched-chain amino acids; LivFGHMK is specific for the
+ transport of leucine, while LivFGHMJ is a transporter for
+ leucine, isoleucine, and valine'"
+ /codon_start=1
+ /transl_table=11
+ /product="leucine/isoleucine/valine transporter
+ ATP-binding subunit"
+ /protein_id="YP_001573007.1"
+ /db_xref="GI:161505895"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MSQPLLAVNGLMMRFGGLLAVNNVSLALREREIVSLIGPNGAGK
+ TTVFNCLTGFYKPTGGTITLRERHLERLPGQQIARMGVVRTFQHVRLFREMTVIENLL
+ VAQHQQLKTGLFSGLLKTPAFRRAQSEALDRAATWLERIGLLEHANRQASNLAYGDQR
+ RLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNHHNTTILLIEHDMKLVM
+ GISDRIYVVNQGTPLANGTPEEIRNNPDVIRAYLGEA"
+ misc_feature 4015027..4015791
+ /gene="livG"
+ /locus_tag="SARI_04074"
+ /note="leucine/isoleucine/valine transporter ATP-binding
+ subunit; Provisional; Region: livG; PRK11300"
+ /db_xref="CDD:183080"
+ misc_feature 4015042..4015767
+ /gene="livG"
+ /locus_tag="SARI_04074"
+ /note="ATP-binding cassette component of branched chain
+ amino acids transport system; Region:
+ ABC_Mj1267_LivG_branched; cd03219"
+ /db_xref="CDD:213186"
+ misc_feature 4015138..4015161
+ /gene="livG"
+ /locus_tag="SARI_04074"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213186"
+ misc_feature order(4015147..4015152,4015156..4015164,4015285..4015287,
+ 4015558..4015563,4015660..4015662)
+ /gene="livG"
+ /locus_tag="SARI_04074"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213186"
+ misc_feature 4015276..4015287
+ /gene="livG"
+ /locus_tag="SARI_04074"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213186"
+ misc_feature 4015486..4015515
+ /gene="livG"
+ /locus_tag="SARI_04074"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213186"
+ misc_feature 4015546..4015563
+ /gene="livG"
+ /locus_tag="SARI_04074"
+ /note="Walker B; other site"
+ /db_xref="CDD:213186"
+ misc_feature 4015570..4015581
+ /gene="livG"
+ /locus_tag="SARI_04074"
+ /note="D-loop; other site"
+ /db_xref="CDD:213186"
+ misc_feature 4015648..4015668
+ /gene="livG"
+ /locus_tag="SARI_04074"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213186"
+ gene 4015796..4016509
+ /gene="livF"
+ /locus_tag="SARI_04075"
+ CDS 4015796..4016509
+ /gene="livF"
+ /locus_tag="SARI_04075"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:INSD:CAD08070.1"
+ /note="'with LivGHMJ and LivGHMK is part of the
+ high-affinity branched-chain amino acid transport system;
+ LivFGHMK is specific for the transport of leucine, while
+ LivFGHMJ is a transporter for leucine, isoleucine, and
+ valine'"
+ /codon_start=1
+ /transl_table=11
+ /product="leucine/isoleucine/valine transporter
+ ATP-binding subunit"
+ /protein_id="YP_001573008.1"
+ /db_xref="GI:161505896"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MEKTMLTFEKVSAHYGKIQALHDVSLHINQGEIVTLIGANGAGK
+ TTLLGTLCGDPRASSGRVVFDGKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEENLA
+ MGGFFAERDRFQERIKWVYELFPRLHERRIQRAGTMSGGEQQMLAIGRALMSQPRLLL
+ LDEPSLGLAPIIIQQIFNTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLE
+ DTGARLLANEAVRSAYLGG"
+ misc_feature 4015796..4016506
+ /gene="livF"
+ /locus_tag="SARI_04075"
+ /note="leucine/isoleucine/valine transporter ATP-binding
+ subunit; Provisional; Region: livF; PRK11614"
+ /db_xref="CDD:183231"
+ misc_feature 4015811..4016476
+ /gene="livF"
+ /locus_tag="SARI_04075"
+ /note="ATP-binding cassette domain of branched-chain amino
+ acid transporter; Region: ABC_TM1139_LivF_branched;
+ cd03224"
+ /db_xref="CDD:213191"
+ misc_feature 4015907..4015930
+ /gene="livF"
+ /locus_tag="SARI_04075"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213191"
+ misc_feature order(4015916..4015921,4015925..4015933,4016054..4016056,
+ 4016279..4016284,4016378..4016380)
+ /gene="livF"
+ /locus_tag="SARI_04075"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213191"
+ misc_feature 4016045..4016056
+ /gene="livF"
+ /locus_tag="SARI_04075"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213191"
+ misc_feature 4016207..4016236
+ /gene="livF"
+ /locus_tag="SARI_04075"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213191"
+ misc_feature 4016267..4016284
+ /gene="livF"
+ /locus_tag="SARI_04075"
+ /note="Walker B; other site"
+ /db_xref="CDD:213191"
+ misc_feature 4016291..4016302
+ /gene="livF"
+ /locus_tag="SARI_04075"
+ /note="D-loop; other site"
+ /db_xref="CDD:213191"
+ misc_feature 4016366..4016386
+ /gene="livF"
+ /locus_tag="SARI_04075"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213191"
+ gene 4016819..4018135
+ /locus_tag="SARI_04076"
+ CDS 4016819..4018135
+ /locus_tag="SARI_04076"
+ /inference="protein motif:HMMPfam:IPR006059"
+ /inference="protein motif:ScanRegExp:IPR006061"
+ /inference="similar to AA sequence:INSD:"
+ /note="with UgpACE is involved in the uptake of
+ glycerol-3-phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="glycerol-3-phosphate transporter periplasmic
+ binding protein"
+ /protein_id="YP_001573009.1"
+ /db_xref="GI:161505897"
+ /db_xref="InterPro:IPR006059"
+ /db_xref="InterPro:IPR006061"
+ /translation="MISLRHTALGVALSLAFTGQALAITTIPFWHSMEGELGKEVDSL
+ AQRFNQANPDYKIVPVYKGNYEQNLSAGIAAFRSGNAPAILQVYEVGTATMMASKAIK
+ PVYEVFQDAGINFDESQFVPTVSGYYTDAKSGHLLSQPFNSSTPVLYYNKDAFKKAGL
+ DPEQPPKTWQELADYTAKLRAAGMKCGYASGWQGWIQLENFSAWNGLPFASKNNGFDG
+ TDAVLEFNKPEQVKHIALLEEMNKKGDFSYVGRKDESTEKFYNGDCAMTTASSGSLAN
+ IRQYAKFNYGVGMMPYDADIKGAPQNAIIGGASLWVMQGKDKETYNGVAKFLDFLAKP
+ ENAAEWHQKTGYLPITTAAYELTREQGYYDKNPGADIATRQMLNKPPLSFTKGLRLGN
+ MPQIRTIVDEELESVWTGKKTPQQALDTAVKRGNQLLRRFEQSTKS"
+ misc_feature 4016819..4018129
+ /locus_tag="SARI_04076"
+ /note="glycerol-3-phosphate transporter periplasmic
+ binding protein; Provisional; Region: PRK10974"
+ /db_xref="CDD:182876"
+ misc_feature 4016819..4018114
+ /locus_tag="SARI_04076"
+ /note="ABC-type sugar transport system, periplasmic
+ component [Carbohydrate transport and metabolism]; Region:
+ UgpB; COG1653"
+ /db_xref="CDD:224567"
+ gene 4018271..4019122
+ /locus_tag="SARI_04077"
+ CDS 4018271..4019122
+ /locus_tag="SARI_04077"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="similar to AA sequence:REFSEQ:NP_462457.1"
+ /note="with UgpEC is involved in the uptake of
+ glycerol-3-phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="glycerol-3-phosphate transporter permease"
+ /protein_id="YP_001573010.1"
+ /db_xref="GI:161505898"
+ /db_xref="InterPro:IPR000515"
+ /translation="MPYLLVAPQLVITVIFFIWPAGEALWYSLQSVDPFGFSSQFVGL
+ ENFVALFHDSYYLDAFWTTIKFSALVTFSGLLVSLFFAALVDYVVRGSRFYQTLMLLP
+ YAVAPAVAAVLWIFLFNPGRGLITHFLGEFGYDWNHAQNSGQAMFLVVFASVWKQISY
+ NFLFFFAALQSIPRSLVEAAAIDGAGPIRRFFRLSLPLIAPVSFFLLVVNLVYAFFDT
+ FPVIDAATAGGPVQATTTLIYKIYREGFTGLDLSASAAQSVVLMFLVIVLTVVQFRYV
+ ESKVRYQ"
+ misc_feature 4018280..4019113
+ /locus_tag="SARI_04077"
+ /note="ABC-type sulfate transport system, permease
+ component [Posttranslational modification, protein
+ turnover, chaperones]; Region: CysU; COG0555"
+ /db_xref="CDD:223629"
+ misc_feature <4018664..4019068
+ /locus_tag="SARI_04077"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature order(4018715..4018717,4018943..4018945,4018979..4018981,
+ 4018988..4018990,4019018..4019020)
+ /locus_tag="SARI_04077"
+ /note="putative PBP binding loops; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(4018730..4018735,4018742..4018744,4018748..4018750,
+ 4018757..4018762,4018766..4018768,4018778..4018783,
+ 4018790..4018792,4018841..4018843,4018883..4018888,
+ 4018895..4018897,4018916..4018927,4018943..4018948,
+ 4018985..4018990,4019018..4019023,4019030..4019035,
+ 4019039..4019044,4019051..4019056,4019063..4019068)
+ /locus_tag="SARI_04077"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(4018793..4018831,4018847..4018852,4018862..4018864)
+ /locus_tag="SARI_04077"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene 4019119..4019964
+ /locus_tag="SARI_04078"
+ CDS 4019119..4019964
+ /locus_tag="SARI_04078"
+ /inference="protein motif:HMMPfam:IPR000515"
+ /inference="similar to AA sequence:REFSEQ:NP_462456.1"
+ /note="with UgpABC is involved in uptake of
+ glycerol-3-phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="glycerol-3-phosphate transporter membrane
+ protein"
+ /protein_id="YP_001573011.1"
+ /db_xref="GI:161505899"
+ /db_xref="InterPro:IPR000515"
+ /translation="MIENRRGLTIFSHTMLILGIAVILFPLYVAFIAATLDDRAVFET
+ PMTLLPGTQLLENIKTIWINGVGVNSAPFWLMMLNSFIMAFSITVGKITVSMLSAFAI
+ VWFRFPLRNLFFWMIFITLMLPVEVRIFPTVEVIANLKMLDSYAGLTLPLMASATATF
+ LFRQFFMTLPDELVEAARIDGASPMRFFRDIVLPLSKTNLAALFVITFIYGWNQYLWP
+ LLIITDVNLGTAVAGIKGMIATGEGTTQWNQVMAAMLLTLIPPVVIVLAMQRAFVRGL
+ VDSEK"
+ misc_feature 4019131..4019949
+ /locus_tag="SARI_04078"
+ /note="ABC-type sugar transport system, permease component
+ [Carbohydrate transport and metabolism]; Region: UgpE;
+ COG0395"
+ /db_xref="CDD:223472"
+ misc_feature 4019347..>4019781
+ /locus_tag="SARI_04078"
+ /note="Transmembrane subunit (TM) found in Periplasmic
+ Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
+ transporters which generally bind type 2 PBPs. These types
+ of transporters consist of a PBP, two TMs, and two
+ cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
+ cd06261"
+ /db_xref="CDD:119394"
+ misc_feature order(4019395..4019400,4019407..4019412,4019425..4019427,
+ 4019455..4019466,4019470..4019499,4019506..4019511,
+ 4019515..4019517,4019572..4019577,4019581..4019583,
+ 4019587..4019589,4019596..4019601,4019605..4019607,
+ 4019617..4019622,4019629..4019631,4019680..4019682,
+ 4019722..4019727,4019734..4019736,4019755..4019766,
+ 4019773..4019778)
+ /locus_tag="SARI_04078"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(4019473..4019517,4019755..4019772)
+ /locus_tag="SARI_04078"
+ /note="conserved gate region; other site"
+ /db_xref="CDD:119394"
+ misc_feature order(4019632..4019670,4019686..4019691,4019701..4019703)
+ /locus_tag="SARI_04078"
+ /note="ABC-ATPase subunit interface; other site"
+ /db_xref="CDD:119394"
+ gene 4020233..4021303
+ /gene="ugpC"
+ /locus_tag="SARI_04079"
+ CDS 4020233..4021303
+ /gene="ugpC"
+ /locus_tag="SARI_04079"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMPfam:IPR013611"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="protein motif:superfamily:IPR008995"
+ /inference="similar to AA sequence:REFSEQ:NP_462455.1"
+ /note="part of the UgpABCE glycerol-3-phosphate uptake
+ system"
+ /codon_start=1
+ /transl_table=11
+ /product="glycerol-3-phosphate transporter ATP-binding
+ subunit"
+ /protein_id="YP_001573012.1"
+ /db_xref="GI:161505900"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR008995"
+ /db_xref="InterPro:IPR013611"
+ /translation="MAGLKLQAVTKSWDGKTQVIQPLTLDVADGEFIVMVGPSGCGKS
+ TLLRMVAGLERVTSGDIWIDRKRVTEMEPKDRGIAMVFQNYALYPHMSVEENMAWGLK
+ IRGMSKAHIEERVREAARILELDGLLKRRPRELSGGQRQRVAMGRAIVREPAVFLFDE
+ PLSNLDAKLRVQMRLELQHLHRRLRTTSLYVTHDQVEAMTLAQRVMVMNKGVAEQIGT
+ PVEVYEKPASRFVASFIGSPAMNLLDGVISASGDRFELPGGLALPVGGDYRGHAGRKM
+ TLGIRPEHIALSSQAEGGVPLTVDTLEILGADNLAHGRWGEQKLVVRLAHQQRPAAGS
+ TLWLYLPEHQRHFFDGETGQRV"
+ misc_feature 4020233..4021300
+ /gene="ugpC"
+ /locus_tag="SARI_04079"
+ /note="glycerol-3-phosphate transporter ATP-binding
+ subunit; Provisional; Region: ugpC; PRK11650"
+ /db_xref="CDD:236947"
+ misc_feature 4020242..4020883
+ /gene="ugpC"
+ /locus_tag="SARI_04079"
+ /note="The N-terminal ATPase domain of the maltose
+ transporter, MalK; Region: ABC_MalK_N; cd03301"
+ /db_xref="CDD:213268"
+ misc_feature 4020341..4020364
+ /gene="ugpC"
+ /locus_tag="SARI_04079"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213268"
+ misc_feature order(4020350..4020355,4020359..4020367,4020479..4020481,
+ 4020707..4020712,4020809..4020811)
+ /gene="ugpC"
+ /locus_tag="SARI_04079"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213268"
+ misc_feature 4020470..4020481
+ /gene="ugpC"
+ /locus_tag="SARI_04079"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213268"
+ misc_feature 4020635..4020664
+ /gene="ugpC"
+ /locus_tag="SARI_04079"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213268"
+ misc_feature 4020695..4020712
+ /gene="ugpC"
+ /locus_tag="SARI_04079"
+ /note="Walker B; other site"
+ /db_xref="CDD:213268"
+ misc_feature 4020719..4020730
+ /gene="ugpC"
+ /locus_tag="SARI_04079"
+ /note="D-loop; other site"
+ /db_xref="CDD:213268"
+ misc_feature 4020797..4020817
+ /gene="ugpC"
+ /locus_tag="SARI_04079"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213268"
+ misc_feature 4021064..4021276
+ /gene="ugpC"
+ /locus_tag="SARI_04079"
+ /note="TOBE domain; Region: TOBE_2; pfam08402"
+ /db_xref="CDD:219823"
+ gene 4021300..4022040
+ /gene="ugpQ"
+ /locus_tag="SARI_04080"
+ CDS 4021300..4022040
+ /gene="ugpQ"
+ /locus_tag="SARI_04080"
+ /inference="protein motif:HMMPanther:IPR004129"
+ /inference="protein motif:HMMPfam:IPR004129"
+ /inference="similar to AA sequence:REFSEQ:NP_462454.1"
+ /note="hydrolyzes diesters during transport at the inner
+ face of the cytoplasmic membrane to glycerol-3-phosphate
+ and alcohol; induced when cells are starved for inorganic
+ phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="cytoplasmic glycerophosphodiester
+ phosphodiesterase"
+ /protein_id="YP_001573013.1"
+ /db_xref="GI:161505901"
+ /db_xref="InterPro:IPR004129"
+ /translation="MSNWPYPHIVAHRGGGKLAPENTLAAINVGARYGHTMIEFDAKL
+ SKDGEIFLLHDDNLERTSNGWGVAGELNWQDLLRVDAGGWFSGEFKGEPLPLLSQVAE
+ RCRQHGMMANIEIKPTTGSGRLTGRVVALAARELWADMTPPLLSSFEIDALEAAQAAA
+ PELPRGLLLDKWREDWRELTTRLGCVSLHLNHTLLNETRVQEIKAAGLRILVYTVNQP
+ QRAADLLRWGVDCICTDSIDDIGPHFQF"
+ misc_feature 4021300..4022031
+ /gene="ugpQ"
+ /locus_tag="SARI_04080"
+ /note="cytoplasmic glycerophosphodiester
+ phosphodiesterase; Provisional; Region: ugpQ; PRK09454"
+ /db_xref="CDD:236524"
+ misc_feature 4021324..4022004
+ /gene="ugpQ"
+ /locus_tag="SARI_04080"
+ /note="Glycerophosphodiester phosphodiesterase domain in
+ Escherichia coli cytosolic glycerophosphodiester
+ phosphodiesterase UgpQ and similar proteins; Region:
+ GDPD_EcUgpQ_like; cd08562"
+ /db_xref="CDD:176505"
+ misc_feature order(4021333..4021335,4021414..4021416,4021420..4021422,
+ 4021459..4021461,4021639..4021641,4021735..4021737,
+ 4021936..4021938)
+ /gene="ugpQ"
+ /locus_tag="SARI_04080"
+ /note="putative active site [active]"
+ /db_xref="CDD:176505"
+ misc_feature order(4021333..4021335,4021459..4021461)
+ /gene="ugpQ"
+ /locus_tag="SARI_04080"
+ /note="catalytic site [active]"
+ /db_xref="CDD:176505"
+ misc_feature order(4021414..4021416,4021420..4021422,4021639..4021641)
+ /gene="ugpQ"
+ /locus_tag="SARI_04080"
+ /note="putative metal binding site [ion binding]; other
+ site"
+ /db_xref="CDD:176505"
+ gene complement(4022037..4022459)
+ /locus_tag="SARI_04081"
+ CDS complement(4022037..4022459)
+ /locus_tag="SARI_04081"
+ /inference="similar to AA sequence:INSD:AAL22412.1"
+ /note="'KEGG: cal:orf19.1526 6.5e-05 SNF2; component of
+ SWI/SNF global transcription activator complex K01509;
+ COG: NOG08680 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573014.1"
+ /db_xref="GI:161505902"
+ /translation="MKMKRFLLIISLLPFTAFAQPLNTMNNPNMQGYQIPSQQRMQTQ
+ MQTQQLQQQGMLKQQMQTQTRSQQQNLQSQLNSSAQRVQQGQPGNGMFGQQTLPNTQG
+ GMLRGIGYPDRMLNHSQPMSPQNSGTPQPGIPLKTISP"
+ misc_feature complement(4022040..4022453)
+ /locus_tag="SARI_04081"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10350"
+ /db_xref="CDD:182398"
+ gene 4022580..4024322
+ /gene="ggt"
+ /locus_tag="SARI_04082"
+ CDS 4022580..4024322
+ /gene="ggt"
+ /locus_tag="SARI_04082"
+ /inference="protein motif:FPrintScan:IPR000101"
+ /inference="protein motif:HMMPanther:IPR000101"
+ /inference="protein motif:HMMPfam:IPR000101"
+ /inference="protein motif:HMMTigr:IPR000101"
+ /inference="protein motif:ScanRegExp:IPR000101"
+ /inference="similar to AA sequence:REFSEQ:YP_218467.1"
+ /note="periplasmic enzyme; post-translationally processed
+ into two subunits which are required for wild-type enzyme
+ activity; cleaves the gammaglutamyl linkages of compounds
+ such as glutathione and transfer the gammaglutamyl group
+ to other amino acids and peptides"
+ /codon_start=1
+ /transl_table=11
+ /product="gamma-glutamyltranspeptidase"
+ /protein_id="YP_001573015.1"
+ /db_xref="GI:161505903"
+ /db_xref="InterPro:IPR000101"
+ /translation="MKSTFMRWVAIAALLVGGTFSAVAHSPIAPPASWNAEEDVFHPV
+ RATQGMVASMDALATQVGVNILKQGGNAVDAAVAVGYALAVTHPQAGALGGGGFMLLR
+ TKDGNTTALDFREMAPTRSTRDMFLDKRGNPDSKKSLTSHLAVGTPGNVAGFSLALEK
+ YGTMPLNKVLRPAIKLAQEGFIVNDALADDLKKYGSETLPQHKNSKAIYWKNGEPLKK
+ GERLVQQNLAKSLILIAENGPDAFYKGAIADQIVEEMRQHGGLITKEDLAAYRAVERT
+ PIVGRYRGYQIYSMPPPSSGGIHIVEILNILENFNIKKYGFGSADAMQVMAEAEKYAY
+ ADRSKYLGDPDFVKVPWQALTNKTYAKSIAEQIDINKAKPSSEIRPGKLAPYESDQTT
+ HFSVVDKDGNAVAVTVTLNSLFGTGIVAGNTGILLNNQMDDFSAKPGVANVHGLLSGD
+ ANAIAPGKRPLSSMSPTIVVKNGKTWLVTGSPGSSRIITTVLQMVVNTIDFGMNVAEA
+ TNAPRFHHQWLPDELRVEKGFSPDTLKLLEQKGQNVVLKEAMGSTQSIMVGPDGELYG
+ ASDPRSVDDLTAGY"
+ misc_feature 4022580..4024319
+ /gene="ggt"
+ /locus_tag="SARI_04082"
+ /note="gamma-glutamyltranspeptidase; Reviewed; Region:
+ ggt; PRK09615"
+ /db_xref="CDD:181992"
+ misc_feature 4022724..4024292
+ /gene="ggt"
+ /locus_tag="SARI_04082"
+ /note="gamma-glutamyltranspeptidase; Region: g_glut_trans;
+ TIGR00066"
+ /db_xref="CDD:129176"
+ gene 4024676..4024758
+ /locus_tag="SARI_04083"
+ misc_RNA 4024676..4024758
+ /locus_tag="SARI_04083"
+ /product="RyhB RNA"
+ /inference="nucleotide motif:Rfam:RF00057"
+ /note="Rfam score 83.12"
+ gene 4024817..4025938
+ /locus_tag="SARI_04084"
+ CDS 4024817..4025938
+ /locus_tag="SARI_04084"
+ /inference="protein motif:HMMPfam:IPR000683"
+ /inference="protein motif:HMMPfam:IPR004104"
+ /inference="similar to AA sequence:INSD:AAL22405.1"
+ /note="'KEGG: eco:b3440 5.8e-175 yhhX; predicted
+ oxidoreductase with NAD(P)-binding Rossmann-fold domain;
+ COG: COG0673 Predicted dehydrogenases and related
+ proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative dehydrogenase"
+ /protein_id="YP_001573016.1"
+ /db_xref="GI:161505904"
+ /db_xref="InterPro:IPR000683"
+ /db_xref="InterPro:IPR004104"
+ /translation="MAAQTIQYVVSFRFALCCSPSALKKDTAMTLHCAFIGFGKSTTR
+ YHLPYVLNRKESWHVAHIFRRHAKPEEQAPQYSHIHFTSDLDEVLGDPQVKLVIVCTH
+ ADSHFEYAKRALEAGKNVLVEKPFTPTLAEAKVLFELARSKGLTVTPYQNRRFDSCFL
+ TAKKAIESGKLGEIVEVESHFDYYRPVAETKPGLPQDGAFYGLGVHTMDQIISLFGRP
+ DHVAYDIRSLRNKANPDDTFEAQLFYGDLKAIVKTSHLVKIDYPKFIVHGTKGSFVKY
+ GIDQQETSLKANIMPGEPGFAADESVGTLEYVNDEGVTVKEEVKPETGDYGRVYDALY
+ ATLTTGAPNYVRESEVLTNLEILERAFEQASPATITLAK"
+ misc_feature 4024904..4025935
+ /locus_tag="SARI_04084"
+ /note="putative oxidoreductase; Provisional; Region:
+ PRK10206"
+ /db_xref="CDD:182305"
+ misc_feature 4024907..4025260
+ /locus_tag="SARI_04084"
+ /note="Oxidoreductase family, NAD-binding Rossmann fold;
+ Region: GFO_IDH_MocA; pfam01408"
+ /db_xref="CDD:201778"
+ misc_feature 4025303..4025617
+ /locus_tag="SARI_04084"
+ /note="Oxidoreductase family, C-terminal alpha/beta
+ domain; Region: GFO_IDH_MocA_C; pfam02894"
+ /db_xref="CDD:217272"
+ gene 4026061..4026756
+ /locus_tag="SARI_04085"
+ CDS 4026061..4026756
+ /locus_tag="SARI_04085"
+ /inference="protein motif:HMMPanther:IPR012093"
+ /inference="protein motif:HMMPfam:IPR003829"
+ /inference="protein motif:HMMPIR:IPR012093"
+ /inference="protein motif:superfamily:IPR011051"
+ /inference="similar to AA sequence:REFSEQ:NP_458375.1"
+ /note="'KEGG: shn:Shewana3_3385 2.6e-13 hypoxanTHIne
+ phosphoribosyltransferase K00760;
+ COG: COG1741 Pirin-related protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573017.1"
+ /db_xref="GI:161505905"
+ /db_xref="InterPro:IPR003829"
+ /db_xref="InterPro:IPR011051"
+ /db_xref="InterPro:IPR012093"
+ /translation="MIYLRKANDRGHANHGWLDSWHTFSFADYYDPNFMGFSALRVIN
+ DDVIDAGQGFGTHPHKDMEILTYVLEGAVEHQDSMGNKEQVPAGEFQIMSAGTGVRHS
+ EYNPSKTDRLRLYQIWIIPQETGITPRYEQRRFDAAQGKQLVLSPDARDGSLKVHQDM
+ ALYRWAMVKEEQSVYLIAAERRVWIQVVKGDVTINGTKATTSDGLAIWDERAISIHAD
+ SDSEVLLFDLPPV"
+ misc_feature 4026061..4026753
+ /locus_tag="SARI_04085"
+ /note="Pirin-related protein [General function prediction
+ only]; Region: COG1741"
+ /db_xref="CDD:224655"
+ misc_feature 4026070..4026417
+ /locus_tag="SARI_04085"
+ /note="Pirin; Region: Pirin; pfam02678"
+ /db_xref="CDD:217181"
+ gene 4027059..4028054
+ /locus_tag="SARI_04086"
+ CDS 4027059..4028054
+ /locus_tag="SARI_04086"
+ /inference="protein motif:HMMPfam:IPR000843"
+ /inference="protein motif:HMMPfam:IPR001761"
+ /inference="protein motif:HMMSmart:IPR000843"
+ /inference="protein motif:ScanRegExp:IPR000843"
+ /inference="protein motif:superfamily:IPR010982"
+ /inference="similar to AA sequence:REFSEQ:YP_218460.1"
+ /note="'KEGG: efa:EF1922 1.7e-07 transcriptional
+ regulator, LacI family/carbohydrate kinase, PfkB family
+ protein K00852;
+ COG: COG1609 Transcriptional regulators;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional regulator IdnR"
+ /protein_id="YP_001573018.2"
+ /db_xref="GI:448236290"
+ /db_xref="InterPro:IPR000843"
+ /db_xref="InterPro:IPR001761"
+ /db_xref="InterPro:IPR010982"
+ /translation="MKKKRPVLQDVADRVGVTKMTVSRFLRNPEQVSVALRGKIAAVL
+ DELGYIPNRAPDILSNATSRAIGVLLPSLTNQVFAEVLRGIESVTDAHGYQTMLAHYG
+ YKPEMEQERLESMLSWNIDGLILTERTHTPRTLKMIEVAGIPVVELMDSQSPCLDIAV
+ GFDNFDAARQMTAAIIARGHRHIAYLGARLDERTIIKQKGYEQAMRDAGLVPYSVMME
+ QSSSYSSGIELMRQARREYPQLDGIFCTNDDLAVGAAFECQRLGLKIPDDIAIAGFHG
+ HDIGQVMEPRLASVLTPRERMGSIGAERLLARIRGETVMPKMLDLGFTLSPGGSI"
+ misc_feature 4027059..4028051
+ /locus_tag="SARI_04086"
+ /note="gluconate operon transcriptional regulator;
+ Provisional; Region: PRK14987"
+ /db_xref="CDD:184949"
+ misc_feature 4027083..4027220
+ /locus_tag="SARI_04086"
+ /note="Helix-turn-helix (HTH) DNA binding domain of the
+ LacI family of transcriptional regulators; Region:
+ HTH_LacI; cd01392"
+ /db_xref="CDD:143331"
+ misc_feature order(4027083..4027085,4027107..4027121,4027125..4027130,
+ 4027137..4027139,4027152..4027157,4027164..4027166,
+ 4027203..4027205,4027212..4027214)
+ /locus_tag="SARI_04086"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:143331"
+ misc_feature 4027203..4027220
+ /locus_tag="SARI_04086"
+ /note="domain linker motif; other site"
+ /db_xref="CDD:143331"
+ misc_feature 4027254..4028048
+ /locus_tag="SARI_04086"
+ /note="Ligand-binding domain of DNA transcription
+ repressor GntR specific for gluconate, a member of the
+ LacI-GalR family of bacterial transcription regulators;
+ Region: PBP1_GntR; cd01575"
+ /db_xref="CDD:107260"
+ misc_feature order(4027287..4027292,4027299..4027301,4027434..4027436,
+ 4027503..4027505,4027542..4027544,4027647..4027649,
+ 4027719..4027721,4027881..4027883,4027932..4027934)
+ /locus_tag="SARI_04086"
+ /note="putative ligand binding site [chemical binding];
+ other site"
+ /db_xref="CDD:107260"
+ misc_feature order(4027290..4027298,4027305..4027310,4027314..4027319,
+ 4027338..4027352,4027356..4027358,4027389..4027391,
+ 4027398..4027400,4027407..4027415,4027728..4027730,
+ 4027812..4027814,4027824..4027826,4027833..4027838)
+ /locus_tag="SARI_04086"
+ /note="putative dimerization interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:107260"
+ gene 4028134..4028724
+ /gene="gntK"
+ /locus_tag="SARI_04087"
+ CDS 4028134..4028724
+ /gene="gntK"
+ /locus_tag="SARI_04087"
+ /inference="protein motif:HMMPfam:IPR000623"
+ /inference="protein motif:HMMTigr:IPR006001"
+ /inference="similar to AA sequence:INSD:AAL22402.1"
+ /note="thermoresistant; catalyzes the formation of
+ 6-phospho-D-gluconate from gluconate"
+ /codon_start=1
+ /transl_table=11
+ /product="gluconate kinase 1"
+ /protein_id="YP_001573019.1"
+ /db_xref="GI:161505907"
+ /db_xref="InterPro:IPR000623"
+ /db_xref="InterPro:IPR006001"
+ /translation="MLPITVTRNNLQLVEWGPALSTTNHDHHVYVLMGVSGSGKSAVA
+ SAVAHQLHAAFLDGDFLHPRCNIEKMASGEPLNDDDRKPWLQALNDAAFAMQRTNKIS
+ LIVCSALKKHYRDLLREGNPNLSFIYLKGDFDVIESRLKARKGHFFKTQMLVTQFETL
+ QEPGTDESDVLVVDIDQPLEGVVASTIEAINKGSTL"
+ misc_feature 4028218..4028658
+ /gene="gntK"
+ /locus_tag="SARI_04087"
+ /note="Gluconate kinase (GntK) catalyzes the phosphoryl
+ transfer from ATP to gluconate. The resulting product
+ gluconate-6-phoshate is an important precursor of
+ gluconate metabolism. GntK acts as a dimmer composed of
+ two identical subunits; Region: GntK; cd02021"
+ /db_xref="CDD:238979"
+ misc_feature order(4028233..4028256,4028302..4028304,4028308..4028310,
+ 4028548..4028550,4028560..4028562)
+ /gene="gntK"
+ /locus_tag="SARI_04087"
+ /note="ATP-binding site [chemical binding]; other site"
+ /db_xref="CDD:238979"
+ misc_feature order(4028239..4028244,4028560..4028562)
+ /gene="gntK"
+ /locus_tag="SARI_04087"
+ /note="Gluconate-6-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:238979"
+ misc_feature 4028281..4028706
+ /gene="gntK"
+ /locus_tag="SARI_04087"
+ /note="Shikimate kinase; Region: SKI; pfam01202"
+ /db_xref="CDD:216360"
+ gene 4028721..4029064
+ /locus_tag="SARI_04088"
+ /note="Pseudogene compared to gi|16766827|ref|NP_462442.1|
+ low-affinity gluconate permease [Salmonella typhimurium
+ LT2]"
+ gene 4029389..4030564
+ /locus_tag="SARI_04089"
+ CDS 4029389..4030564
+ /locus_tag="SARI_04089"
+ /inference="protein motif:HMMPfam:IPR000534"
+ /inference="protein motif:HMMPfam:IPR012280"
+ /inference="protein motif:HMMPIR:IPR012080"
+ /inference="protein motif:HMMTigr:IPR011534"
+ /inference="protein motif:ScanRegExp:IPR000319"
+ /inference="similar to AA sequence:INSD:AAB69392.1"
+ /note="catalyzes the formation of 4-aspartyl phosphate
+ from aspartate 4-semialdehyde"
+ /codon_start=1
+ /transl_table=11
+ /product="aspartate-semialdehyde dehydrogenase"
+ /protein_id="YP_001573020.1"
+ /db_xref="GI:161505908"
+ /db_xref="InterPro:IPR000319"
+ /db_xref="InterPro:IPR000534"
+ /db_xref="InterPro:IPR011534"
+ /db_xref="InterPro:IPR012080"
+ /db_xref="InterPro:IPR012280"
+ /translation="MVKDAPQDTGAHTQHISLQEKNAMKNVGFIGWRGMVGSVLMQRM
+ VEERDFDAIRPVFFSTSQFGQAAPTFGDTATGTLQDAFDLDALKALDIIVTCQGGDYT
+ NEIYPKLRESGWQGYWIDAASTLRMKDDAIIILDPVNQDVITDGLNNGVKTFVGGNCT
+ VSLMLMSLGGLFAHNLVDWVSVATYQAASGGGARHMRELLTQMGQLYGHVADELATPS
+ SAILDIERKVTALTRSGELPVDNFGVPLAGSLIPWIDKQLDNGQSREEWKGQAETNKI
+ LNTASVIPVDGLCVRVGALRCHSQAFTIKLKKEVSIPTVEELLAAHNSWAKVVPNDRD
+ ITMRELTPAAVTGTLTTPVGRLRKLNMGPEFLSAFTVGDQLLWGAAEPLRRMLRQLA"
+ misc_feature 4029458..4030558
+ /locus_tag="SARI_04089"
+ /note="aspartate-semialdehyde dehydrogenase; Reviewed;
+ Region: PRK06598"
+ /db_xref="CDD:235839"
+ misc_feature 4029464..4029817
+ /locus_tag="SARI_04089"
+ /note="Semialdehyde dehydrogenase, NAD binding domain;
+ Region: Semialdhyde_dh; smart00859"
+ /db_xref="CDD:214863"
+ gene 4030921..4033107
+ /locus_tag="SARI_04090"
+ CDS 4030921..4033107
+ /locus_tag="SARI_04090"
+ /inference="protein motif:Gene3D:IPR013781"
+ /inference="protein motif:HMMPfam:IPR004193"
+ /inference="protein motif:HMMPfam:IPR006047"
+ /inference="protein motif:HMMPfam:IPR006048"
+ /inference="protein motif:HMMPIR:IPR013782"
+ /inference="protein motif:HMMSmart:IPR006589"
+ /inference="protein motif:HMMTigr:IPR006407"
+ /note="'catalyzes the transfer of a segment of a
+ 1,4-alpha-D-glucan chain to a primary hydroxy group in a
+ similar glucan chain'"
+ /codon_start=1
+ /transl_table=11
+ /product="glycogen branching enzyme"
+ /protein_id="YP_001573021.1"
+ /db_xref="GI:161505909"
+ /db_xref="InterPro:IPR004193"
+ /db_xref="InterPro:IPR006047"
+ /db_xref="InterPro:IPR006048"
+ /db_xref="InterPro:IPR006407"
+ /db_xref="InterPro:IPR006589"
+ /db_xref="InterPro:IPR013781"
+ /db_xref="InterPro:IPR013782"
+ /translation="MSSRIDRDVINALIAGHFADPFSVLGMHQTQAGLEVRALLPDAT
+ DVWVIEPKTGRKVGKLECLDARGFFCGVLPRRKNFFRYQLAVVWHGQQNLIDDPYRFG
+ PLIQEMDAWLLSEGTHLRPYETLGAHADTMDGVTGTRFSVWAPNARRVSVVGQFNYWD
+ GRRHPMRLRKESGIWELFIPGAHNGQLYKFELLDANGNLRIKADPYAFEAQMRPETAS
+ MICGLPEKVTQSEERQKANQFDAPISIYEVHLGSWRRHTDNNFWLSYRELADQLVPYA
+ KWMGFTHLELLPVNEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFINAAHAAGLNVIL
+ DWVPGHFPSDDFSLAEFDGTHLYEHSDPREGYHQDWNTLIYNYGRREVSNYLVGNALY
+ WMERFGIDALRVDAVASMIYRDYSRKEGEWIPNEFGGRENLEAIEFLRNTNRIIGEQV
+ PGAVSMAEESTDFSGVTRPPETGGLGFWFKWNLGWMHDTLDYMKLDPVYRQYHHDKLT
+ FGMLYNHTENFVLPLSHDEVVHGKKSILDRMPGDAWQKFANLRAYYGWMWAFPGKKLL
+ FMGNEFAQGREWNHDASLDWHLLEGGDNWHHGVQRLVRDLNHTYRHHKALHELDFDAY
+ GFEWLVVDDNERSVLIFVRRDKAGNEIIVASNFTPVPRYDYRFGVNQPGRWREILNTD
+ SMHYHGSNTGNGGVVHSDEIESHGRQHSLRLTLPPLATIWLMREGE"
+ misc_feature 4030933..4033104
+ /locus_tag="SARI_04090"
+ /note="glycogen branching enzyme; Provisional; Region:
+ PRK05402"
+ /db_xref="CDD:235445"
+ misc_feature 4031272..4031583
+ /locus_tag="SARI_04090"
+ /note="N-terminal Early set domain associated with the
+ catalytic domain of prokaryotic glycogen branching enzyme;
+ Region: E_set_GBE_prok_N; cd02855"
+ /db_xref="CDD:199885"
+ misc_feature 4031554..4032756
+ /locus_tag="SARI_04090"
+ /note="Alpha amylase catalytic domain found in the
+ Glycogen branching enzyme (also called 1,4-alpha-glucan
+ branching enzyme); Region: AmyAc_Glg_BE; cd11322"
+ /db_xref="CDD:200461"
+ misc_feature order(4032127..4032129,4032133..4032138,4032292..4032294,
+ 4032493..4032498)
+ /locus_tag="SARI_04090"
+ /note="active site"
+ /db_xref="CDD:200461"
+ misc_feature order(4032133..4032135,4032292..4032294,4032496..4032498)
+ /locus_tag="SARI_04090"
+ /note="catalytic site [active]"
+ /db_xref="CDD:200461"
+ misc_feature 4032802..4033104
+ /locus_tag="SARI_04090"
+ /note="Alpha amylase, C-terminal all-beta domain; Region:
+ Alpha-amylase_C; pfam02806"
+ /db_xref="CDD:217237"
+ gene 4033083..4035080
+ /locus_tag="SARI_04091"
+ CDS 4033083..4035080
+ /locus_tag="SARI_04091"
+ /inference="protein motif:Gene3D:IPR013780"
+ /inference="protein motif:Gene3D:IPR013781"
+ /inference="protein motif:Gene3D:IPR013783"
+ /inference="protein motif:HMMPfam:IPR004193"
+ /inference="protein motif:HMMPfam:IPR006047"
+ /inference="protein motif:HMMPIR:IPR013779"
+ /inference="protein motif:HMMSmart:IPR006589"
+ /inference="protein motif:HMMTigr:IPR011837"
+ /note="'catalyzes the hydrolysis of the
+ alpha-1,6-glucosidic linkages in partially depolymerized
+ glycogen'"
+ /codon_start=1
+ /transl_table=11
+ /product="glycogen debranching enzyme"
+ /protein_id="YP_001573022.1"
+ /db_xref="GI:161505910"
+ /db_xref="InterPro:IPR004193"
+ /db_xref="InterPro:IPR006047"
+ /db_xref="InterPro:IPR006589"
+ /db_xref="InterPro:IPR011837"
+ /db_xref="InterPro:IPR013779"
+ /db_xref="InterPro:IPR013780"
+ /db_xref="InterPro:IPR013781"
+ /db_xref="InterPro:IPR013783"
+ /translation="MADAGGGMTQLAIGEAMPHGATYDGHGVNFTLFSAHAERVELCV
+ FDSRGNERRYDLPGRSGDVWHGYLAGARPGLRYGYRVHGPWQPAQGHRFNPAKLLLDP
+ YARRVEGELKDHPLLHGGHDEADYRDNAAIAPKSVIISDHYDWEDDTAPRTPWGKTVI
+ YEAHVKGLTYLHPELPKEIRGTYKALGHPVMVAYFKQLGITALELLPVAQFASEPRLQ
+ RMGLTNYWGYNPIAMFALHPAYASSPETALDEFRDAVKALHRAGIEIILDIVLNHSAE
+ LDLDGPTFSLRGIDNRSYYWIRDDGDYHNWTGCGNTLNLSHPGVVEYACECLRYWVET
+ CHVDGFRFDLASVMGRTPAFRQDAPLFAAIKACPVLSTVKLIAEPWDIGEGGYQVGNF
+ PPPFAEWNDHFRDAARRFWLPRNLTTGEFACRFAASSDVFKRNGRMPGASVNLITAHD
+ GFTLRDCVCFNQKHNEANGEENRDGTNNNYSDNHGKEGLGGPLDLIERRRDSIHALLA
+ TLLLSQGTPMLLAGDEHGHSQHGNNNAYCQDNALTWLDWQQANRGLTTFTAALIRLRQ
+ QISALTSNSWWEEGDGNVRWLNKNAQTLSADEWQNGPKLMQILLSDRFLIAVNATLEV
+ TDIVLPEGVWRAVPPFAGEDNPVITAVWQGPAHGLCVFQRG"
+ misc_feature 4033104..4035077
+ /locus_tag="SARI_04091"
+ /note="glycogen debranching enzyme; Provisional; Region:
+ PRK03705"
+ /db_xref="CDD:235152"
+ misc_feature 4033134..4033502
+ /locus_tag="SARI_04091"
+ /note="N-terminal Early set domain associated with the
+ catalytic domain of Glycogen debranching enzyme and
+ bacterial isoamylase (also called glycogen
+ 6-glucanohydrolase); Region: E_set_GDE_Isoamylase_N;
+ cd02856"
+ /db_xref="CDD:199886"
+ misc_feature 4033509..4034786
+ /locus_tag="SARI_04091"
+ /note="Alpha amylase catalytic domain found in glycogen
+ debranching enzymes; Region: AmyAc_Glg_debranch; cd11326"
+ /db_xref="CDD:200465"
+ misc_feature order(4034103..4034105,4034109..4034114,4034214..4034216,
+ 4034427..4034432)
+ /locus_tag="SARI_04091"
+ /note="active site"
+ /db_xref="CDD:200465"
+ misc_feature order(4034109..4034111,4034214..4034216,4034430..4034432)
+ /locus_tag="SARI_04091"
+ /note="catalytic site [active]"
+ /db_xref="CDD:200465"
+ gene 4035095..4036390
+ /gene="glgC"
+ /locus_tag="SARI_04092"
+ CDS 4035095..4036390
+ /gene="glgC"
+ /locus_tag="SARI_04092"
+ /inference="protein motif:HMMPfam:IPR005835"
+ /inference="protein motif:HMMTigr:IPR011831"
+ /inference="protein motif:ScanRegExp:IPR005836"
+ /inference="similar to AA sequence:SwissProt:Q57IU0"
+ /note="catalyzes the formation of ADP-glucose and
+ diphosphate from ATP and alpha-D-glucose 1-phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="glucose-1-phosphate adenylyltransferase"
+ /protein_id="YP_001573023.1"
+ /db_xref="GI:161505911"
+ /db_xref="InterPro:IPR005835"
+ /db_xref="InterPro:IPR005836"
+ /db_xref="InterPro:IPR011831"
+ /translation="MVSLEKNDRLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPA
+ VHFGGKFRIIDFALSNCLNSGIRRIGVITQYQSHTLVQHIQRGWSLFSEEMNEFVDLL
+ PAQQRMQGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKG
+ ARCTVACMPVPIKEATAFGVMAVDESEKIIDFVEKPANPPAMPGDDSKALASMGIYVF
+ DADYLYELLAADDKDDASSHDFGKDIIPKITREGMAYAHPFPLSCVQSDPDAEPYWRD
+ VGTLEAYWKANLDLASVTPELDMYDQNWPIRTHMESLPPAKFVQDRSGSHGMTLNSLV
+ SGGCIISGSVVVQSVLFPRVRINSFCNIDSAVLLPEVWVGRSCRLRRCIIDRACIIPE
+ GMVIGENAEEDARRFYRSEEGIVLVTREMLRKLQVKQER"
+ misc_feature 4035107..4036381
+ /gene="glgC"
+ /locus_tag="SARI_04092"
+ /note="glucose-1-phosphate adenylyltransferase;
+ Provisional; Region: glgC; PRK00725"
+ /db_xref="CDD:234824"
+ misc_feature 4035158..4035925
+ /gene="glgC"
+ /locus_tag="SARI_04092"
+ /note="ADP-glucose pyrophosphorylase is involved in the
+ biosynthesis of glycogen or starch; Region:
+ ADP_Glucose_PP; cd02508"
+ /db_xref="CDD:133002"
+ misc_feature order(4035167..4035169,4035173..4035178,4035437..4035439,
+ 4035443..4035445,4035515..4035520,4035809..4035811,
+ 4035815..4035820)
+ /gene="glgC"
+ /locus_tag="SARI_04092"
+ /note="ligand binding site; other site"
+ /db_xref="CDD:133002"
+ misc_feature order(4035326..4035328,4035335..4035337,4035392..4035394,
+ 4035401..4035403,4035410..4035412,4035464..4035466,
+ 4035470..4035472,4035482..4035487)
+ /gene="glgC"
+ /locus_tag="SARI_04092"
+ /note="oligomer interface; other site"
+ /db_xref="CDD:133002"
+ misc_feature 4036055..4036360
+ /gene="glgC"
+ /locus_tag="SARI_04092"
+ /note="Glucose-1-phosphate adenylyltransferase, C-terminal
+ Left-handed parallel beta helix (LbH) domain:
+ Glucose-1-phosphate adenylyltransferase is also known as
+ ADP-glucose synthase or ADP-glucose pyrophosphorylase. It
+ catalyzes the first committed and...; Region:
+ LbH_G1P_AT_C; cd04651"
+ /db_xref="CDD:100056"
+ misc_feature 4036058..4036096
+ /gene="glgC"
+ /locus_tag="SARI_04092"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:100056"
+ misc_feature order(4036085..4036087,4036097..4036102,4036133..4036135,
+ 4036139..4036141,4036148..4036150,4036247..4036249,
+ 4036352..4036354)
+ /gene="glgC"
+ /locus_tag="SARI_04092"
+ /note="N-terminal domain interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:100056"
+ misc_feature order(4036247..4036252,4036349..4036351)
+ /gene="glgC"
+ /locus_tag="SARI_04092"
+ /note="sulfate 1 binding site; other site"
+ /db_xref="CDD:100056"
+ gene 4036390..4037823
+ /gene="glgA"
+ /locus_tag="SARI_04093"
+ CDS 4036390..4037823
+ /gene="glgA"
+ /locus_tag="SARI_04093"
+ /inference="protein motif:HMMPfam:IPR001296"
+ /inference="protein motif:HMMPfam:IPR013534"
+ /inference="protein motif:HMMTigr:IPR011835"
+ /inference="similar to AA sequence:SwissProt:Q5PM09"
+ /note="'catalyzes the formation of alpha-1,4-glucan chains
+ from ADP-glucose'"
+ /codon_start=1
+ /transl_table=11
+ /product="glycogen synthase"
+ /protein_id="YP_001573024.1"
+ /db_xref="GI:161505912"
+ /db_xref="InterPro:IPR001296"
+ /db_xref="InterPro:IPR011835"
+ /db_xref="InterPro:IPR013534"
+ /translation="MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGIDVRVLLPGF
+ PDIRRGIPDAHVVSRRDTFAGKISLLFGHYNGVGVYLIDAPHLYERPGSPYHDTNLYA
+ YTDNVLRFALLGWVGCEMACGLDPFWRPDVVHAHDWHAGLAPAYLAARGRPAKSVFTV
+ HNLAYQGMFYAKHIDDIELPWSFFNMHGLEFNGQISFLKAGLYYADHITAVSPTYARE
+ ITEPQFAYGMEGLLRQRHLEGRLSGVLNGVDEKIWSPESDLLLASRYTRDTLEEKAEN
+ KRQLQIAMGLKVNDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVL
+ QEGFLAAAAEHPGQVGVQIGYHEAFSHRIMGGADIILVPSRFEPCGLTQLYGLKYGTL
+ PLVRRTGGLADTVSDSSLENLADGIASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRF
+ VQRQAMAMDFSWQVAAKSYRELYYRLK"
+ misc_feature 4036390..4037817
+ /gene="glgA"
+ /locus_tag="SARI_04093"
+ /note="glycogen synthase; Provisional; Region: glgA;
+ PRK00654"
+ /db_xref="CDD:234809"
+ misc_feature 4036393..4037814
+ /gene="glgA"
+ /locus_tag="SARI_04093"
+ /note="This family is most closely related to the GT1
+ family of glycosyltransferases. Glycogen synthase
+ catalyzes the formation and elongation of the
+ alpha-1,4-glucose backbone using ADP-glucose, the second
+ and key step of glycogen biosynthesis. This family...;
+ Region: GT1_Glycogen_synthase_DULL1_like; cd03791"
+ /db_xref="CDD:99965"
+ misc_feature order(4036432..4036434,4036441..4036443,4037281..4037289,
+ 4037449..4037454,4037467..4037469,4037518..4037520,
+ 4037533..4037535)
+ /gene="glgA"
+ /locus_tag="SARI_04093"
+ /note="ADP-binding pocket [chemical binding]; other site"
+ /db_xref="CDD:99965"
+ misc_feature order(4037038..4037040,4037578..4037580,4037593..4037598,
+ 4037602..4037604,4037686..4037688)
+ /gene="glgA"
+ /locus_tag="SARI_04093"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99965"
+ gene 4037843..4040290
+ /locus_tag="SARI_04094"
+ CDS 4037843..4040290
+ /locus_tag="SARI_04094"
+ /inference="protein motif:HMMPanther:IPR000811"
+ /inference="protein motif:HMMPfam:IPR000811"
+ /inference="protein motif:HMMPIR:IPR000811"
+ /inference="protein motif:HMMTigr:IPR011833"
+ /inference="protein motif:ScanRegExp:IPR000811"
+ /note="'KEGG: spt:SPA3385 0. glgP; glycogen phosphorylase
+ K00688;
+ COG: COG0058 Glucan phosphorylase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573025.1"
+ /db_xref="GI:161505913"
+ /db_xref="InterPro:IPR000811"
+ /db_xref="InterPro:IPR011833"
+ /translation="MNAPFTYASPTLSVEALKHSIAYKLMFTIGKDPVIANKHEWLNA
+ TLFAVRDRLVERWLRSNRAQLSQETRQVYYLSMEFLIGRTLSNALLSLGIYDDVKGAL
+ EAMGLDLEELIDEENDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNI
+ VDGRQKESPDYWLEYGNPWEFKRHNTRYKVRFGGRIQQEGKKARWIETEEILAVAYDQ
+ IIPGYDTDATNTLRLWNAQASSEINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTY
+ SGRELRLRQEYFLVSATVQDILSRHYHLHKTYANLADKIAIHLNDTHPVLSIPELMRL
+ LIDEHKFNWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYF
+ LKTLQEQYPNDTSLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLF
+ ADFAKIFPTRFCNVTNGVTPRRWLALANPPLSDVLDENIGRTWRTDLSQLSELEQHCD
+ YPLVNHAVRQAKLENKKRLAMVIAQQLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVI
+ TRYNRIKENPEADWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKV
+ VFIPNYSVSLAQVIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMQ
+ EHVGEENIFIFGNTAEEVETLRRQGYKPRDYYEKDEELHQVLTQIGSGVFNPEEPGRY
+ RDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYRCPEEWTTKTMLNIANMGYFSSDR
+ TIKEYAENIWHIDPVRL"
+ misc_feature 4037843..4040287
+ /locus_tag="SARI_04094"
+ /note="glycogen phosphorylase; Provisional; Region:
+ PRK14986"
+ /db_xref="CDD:184948"
+ misc_feature 4037894..4040272
+ /locus_tag="SARI_04094"
+ /note="This is a family of oligosaccharide phosphorylases.
+ It includes yeast and mammalian glycogen phosphorylases,
+ plant starch/glucan phosphorylase, as well as the
+ maltodextrin phosphorylases of bacteria. The members of
+ this family catalyze the breakdown of...; Region:
+ GT1_Glycogen_Phosphorylase; cd04300"
+ /db_xref="CDD:99996"
+ misc_feature order(4037894..4037896,4037900..4037902,4037906..4037911,
+ 4037915..4037923,4037990..4037998,4038389..4038391,
+ 4038656..4038658,4038665..4038667)
+ /locus_tag="SARI_04094"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99996"
+ misc_feature order(4038074..4038076,4038080..4038082,4038212..4038220,
+ 4038650..4038652,4038659..4038661,4038665..4038667,
+ 4038686..4038688,4038803..4038805,4038809..4038811,
+ 4038917..4038922,4038932..4038934,4039238..4039240,
+ 4039259..4039261,4039490..4039495,4039499..4039510,
+ 4039610..4039612,4039625..4039627,4039631..4039633,
+ 4039733..4039738,4039802..4039804,4039808..4039819,
+ 4039826..4039828)
+ /locus_tag="SARI_04094"
+ /note="active site pocket [active]"
+ /db_xref="CDD:99996"
+ gene complement(4040381..4041889)
+ /gene="glpD"
+ /locus_tag="SARI_04095"
+ CDS complement(4040381..4041889)
+ /gene="glpD"
+ /locus_tag="SARI_04095"
+ /inference="protein motif:HMMPfam:IPR006076"
+ /inference="protein motif:ScanRegExp:IPR000447"
+ /inference="similar to AA sequence:INSD:CAD08095.1"
+ /note="in Escherichia coli this homodimeric enzyme is
+ expressed under aerobic conditions; anaerobic expression
+ is repressed by the arcAB system; converts
+ sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy
+ acetone phosphate and ubiquinol-8; associates with the
+ cytoplasmic membrane"
+ /codon_start=1
+ /transl_table=11
+ /product="glycerol-3-phosphate dehydrogenase"
+ /protein_id="YP_001573026.1"
+ /db_xref="GI:161505914"
+ /db_xref="InterPro:IPR000447"
+ /db_xref="InterPro:IPR006076"
+ /translation="METKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSA
+ SSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPHIAFPMRFRLPHRPHLRPAWMIR
+ IGLFMYDHLGKRTSLPGSTGVRFGADSVLKPEIVRGFEYSDCWVDDARLVLANAQMVV
+ RKSGEVLTRTRATAARRENGLWIVEAEDIDTGKKYAWQARGLVNATGPWVKQFFDEGM
+ HLPSPYGIRLIKGSHIVVPRVHNQKQAYILQNEDKRIVFVIPWMEEFSIIGTTDVEYK
+ GDPKAVKIEDSEINYLLKVYNAHFQKQLGRDDIVWTYSGVRPLCDDESDSPQAITRDY
+ TLDIHDENGKAPLLSVFGGKLTTYRKLAEHAMEKLAPWYPGIGPAWTKTCVLPGGDID
+ GSREDYAATLRRRYPFLTESLARHYSRTYGSNTEWILGEAASLLDLGEDFGHEFYEAE
+ LKYLVDHEWVRRTEDAIWRRTKEGMWLTAEQQSRITQWLAEYIGKRQLSLAS"
+ misc_feature complement(4040387..4041889)
+ /gene="glpD"
+ /locus_tag="SARI_04095"
+ /note="glycerol-3-phosphate dehydrogenase; Reviewed;
+ Region: glpD; PRK12266"
+ /db_xref="CDD:237027"
+ gene 4042088..4042414
+ /gene="glpE"
+ /locus_tag="SARI_04096"
+ CDS 4042088..4042414
+ /gene="glpE"
+ /locus_tag="SARI_04096"
+ /inference="protein motif:HMMPfam:IPR001763"
+ /inference="protein motif:HMMSmart:IPR001763"
+ /inference="similar to AA sequence:INSD:AAL22386.1"
+ /note="belongs to rhodanese family; thiosulfate
+ thiotransferase; in Escherichia coli this enzyme catalyzes
+ the formation of thiocyanate from thiosulfate and cyanide
+ with low efficiency; contains an active site cysteine"
+ /codon_start=1
+ /transl_table=11
+ /product="thiosulfate sulfurtransferase"
+ /protein_id="YP_001573027.1"
+ /db_xref="GI:161505915"
+ /db_xref="InterPro:IPR001763"
+ /translation="MEQFECITVEEAYQKLHQGAAVLVDIRDPQSYAMGHAPQAFHLT
+ NDTLGAFMREYDFDTAVMVMCYHGNSSKGAAQYLLQQGYDAVYSIDGGFEAWHRHFPA
+ DVANGA"
+ misc_feature 4042103..4042381
+ /gene="glpE"
+ /locus_tag="SARI_04096"
+ /note="GlpE sulfurtransferase (ST) and homologs are
+ members of the Rhodanese Homology Domain superfamily.
+ Unlike other rhodanese sulfurtransferases, GlpE is a
+ single domain protein but indications are that it
+ functions as a dimer. The active site contains a...;
+ Region: GlpE_ST; cd01444"
+ /db_xref="CDD:238721"
+ misc_feature 4042280..4042282
+ /gene="glpE"
+ /locus_tag="SARI_04096"
+ /note="active site residue [active]"
+ /db_xref="CDD:238721"
+ gene 4042490..4043320
+ /locus_tag="SARI_04097"
+ CDS 4042490..4043320
+ /locus_tag="SARI_04097"
+ /inference="protein motif:HMMPanther:IPR002610"
+ /inference="protein motif:HMMPfam:IPR002610"
+ /inference="similar to AA sequence:REFSEQ:YP_218442.1"
+ /note="protease responsible for the cleavage between Ser
+ and Asp residues of proteins in regions of high local
+ hydrophilicity"
+ /codon_start=1
+ /transl_table=11
+ /product="intramembrane serine protease GlpG"
+ /protein_id="YP_001573028.1"
+ /db_xref="GI:161505916"
+ /db_xref="InterPro:IPR002610"
+ /translation="MLMITSFANPRVAQAFVDYMATQGVILTIQQHNQSDIWLADESQ
+ AERVRAELARFMENPGDPRYLAASWQSGQTNSGLRYRRFPFLATLRERAGPVTWTVMV
+ ACVLVYIAMNLVGDQTVMVWLAWPFDPALKFEFWRYFTHIFMHFSLMHILFNLLWWWY
+ LGGAVEKRLGSGKLIVITVISALLSGYVQQKFSGPWFGGLSGVVYALMGYVWLRGERD
+ PQSGIYLQRGLIIFALLWIVAGWLDWFGMSMANGAHIAGLIVGLAMAFVDTLNARKRT
+ "
+ misc_feature 4042490..4043317
+ /locus_tag="SARI_04097"
+ /note="intramembrane serine protease GlpG; Provisional;
+ Region: PRK10907"
+ /db_xref="CDD:182828"
+ misc_feature 4042490..4042786
+ /locus_tag="SARI_04097"
+ /note="Protein of unknown function (DUF3582); Region:
+ DUF3582; pfam12122"
+ /db_xref="CDD:221430"
+ misc_feature 4042763..4043317
+ /locus_tag="SARI_04097"
+ /note="Membrane associated serine protease [Amino acid
+ transport and metabolism]; Region: COG0705"
+ /db_xref="CDD:223777"
+ gene 4043301..4044170
+ /locus_tag="SARI_04098"
+ CDS 4043301..4044170
+ /locus_tag="SARI_04098"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR001034"
+ /inference="protein motif:HMMSmart:IPR001034"
+ /inference="protein motif:ScanRegExp:IPR001034"
+ /inference="similar to AA sequence:REFSEQ:YP_152506.1"
+ /note="'represses the glpD, glpFK, glpTQ, and glpACB
+ operons involved in glycerol-3-phosphate metabolism'"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional repressor GlpR"
+ /protein_id="YP_001573029.1"
+ /db_xref="GI:161505917"
+ /db_xref="InterPro:IPR001034"
+ /db_xref="InterPro:IPR011991"
+ /translation="MRENELEAYPAGGRDIFPGRIGDTVIRRKVGYFQRLFMKQTQRH
+ DAIIELVKKQGYVSTEELVEHFSVSPQTIRRDLNDLAEQNIILRHHGGAALPSSSVNT
+ PWHDRKATQTEEKERIARKVATQIPNGSTLFIDIGTTPEAVAHALLGHSNLRIVTNNL
+ NVANTLMAKEDFRIILAGGELRSRDGGIIGEATQDFIAQFRLDFGILGISGIDSDGSL
+ LEFDYHEVRTKRAIIENSRHVMLVVDHSKFGRNAMVNMGSISMVDVVYTDTLPPAGVM
+ QVIADHHIQLELC"
+ misc_feature 4043412..4044167
+ /locus_tag="SARI_04098"
+ /note="DNA-binding transcriptional repressor GlpR;
+ Provisional; Region: PRK10906"
+ /db_xref="CDD:182827"
+ misc_feature 4043427..4043594
+ /locus_tag="SARI_04098"
+ /note="DeoR-like helix-turn-helix domain; Region:
+ HTH_DeoR; pfam08220"
+ /db_xref="CDD:116806"
+ misc_feature 4043625..4044107
+ /locus_tag="SARI_04098"
+ /note="DeoR C terminal sensor domain; Region: DeoRC;
+ pfam00455"
+ /db_xref="CDD:201239"
+ gene complement(4044264..4046969)
+ /locus_tag="SARI_04099"
+ CDS complement(4044264..4046969)
+ /locus_tag="SARI_04099"
+ /inference="protein motif:BlastProDom:IPR000792"
+ /inference="protein motif:Gene3D:IPR011990"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000792"
+ /inference="protein motif:HMMSmart:IPR000792"
+ /inference="protein motif:ScanRegExp:IPR000792"
+ /note="Positively regulates the transcription of the
+ maltose regulon whose gene products are responsible for
+ uptake and catabolism of malto-oligosaccharides"
+ /codon_start=1
+ /transl_table=11
+ /product="transcriptional regulator MalT"
+ /protein_id="YP_001573030.1"
+ /db_xref="GI:161505918"
+ /db_xref="InterPro:IPR000792"
+ /db_xref="InterPro:IPR011990"
+ /db_xref="InterPro:IPR011991"
+ /translation="MLIPSKLSRPVRLDHTVVRERLLAKLSGANNFRLALVTSPAGYG
+ KTTLVSQWAAGKNELGWFSLDEGDNQQERFASYLIAAIQQATGGHCTTSEAMAQKRQY
+ ASLTSLFAQLFIELAQWHRPLYLVIDDYHLITNPVIHDAMRFFLRHQPENFTLVVLSR
+ NLPQLGIANLRVRDQLLEIGSQQLAFNHQEAKQFFDRRLSSPIEAAESSRMCDDVAGW
+ ATALQLIALSARQNNHSAHQSARRLAGINASHLSDYLVDEVLDNVDVSTRHFLLKSAI
+ LRSMNDALIVRVTGEENGQMRLEEIERQGLFLQRMDDTGEWFSYHPLFGSFLRQRCQW
+ ELTAELPGIHRSAAESWMEQGFPSEAIHHALAAGDAQMLRDILLNHAWRLFNHSELAL
+ LEESLKALPWESLLENPRLVLLQAWLMQSQHRYSEVNTLLARAEQEIKGVMDGTLHAE
+ FNALRAQVAINDGNPEEAERLAKLALDELPLAWFYSRIVATSVHGEVLHCKGDLSQSL
+ SLMQQTEQMARHHDVWHYALWSLIQQSEIQFAQGFLQAAWETQERAFQLIKEQHLEQL
+ PMHEFLVRIRAQLLWAWARLDEAEASARSGIAVLSTFQPQQQLQCLTLLVQCSLARGD
+ LDNARSQLNRLENLLGNGRYHCDWISNADKVRVIYWQLTGDKKSAANWLRHTPKPAFA
+ NNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQ
+ SGRKTDAQRVLLDALQLANRTGFISHFVIEGEAMAQQLRQLIQLNTLPEMEQHRAQRI
+ LREINQHHRHKFAHFDEGFVERLLNHPDVPELIRTSPLTQREWQVLGLIYSGYSNEQI
+ AGELAVAATTIKTHIRNLYQKLGVAHRQDAVQHAQQLLKMMGYGV"
+ misc_feature complement(4044270..4046969)
+ /locus_tag="SARI_04099"
+ /note="transcriptional regulator MalT; Provisional;
+ Region: PRK04841"
+ /db_xref="CDD:235315"
+ misc_feature complement(4046502..4046915)
+ /locus_tag="SARI_04099"
+ /note="AAA ATPase domain; Region: AAA_16; pfam13191"
+ /db_xref="CDD:221970"
+ misc_feature complement(4044294..4044464)
+ /locus_tag="SARI_04099"
+ /note="C-terminal DNA-binding domain of LuxR-like
+ proteins. This domain contains a helix-turn-helix motif
+ and binds DNA. Proteins belonging to this group are
+ response regulators; some act as transcriptional
+ activators, others as transcriptional repressors. Many...;
+ Region: LuxR_C_like; cd06170"
+ /db_xref="CDD:99777"
+ misc_feature complement(order(4044321..4044323,4044354..4044368,
+ 4044372..4044377,4044381..4044386,4044408..4044416,
+ 4044453..4044461))
+ /locus_tag="SARI_04099"
+ /note="DNA binding residues [nucleotide binding]"
+ /db_xref="CDD:99777"
+ misc_feature complement(order(4044294..4044299,4044306..4044308,
+ 4044315..4044323,4044414..4044416,4044420..4044422,
+ 4044426..4044428))
+ /locus_tag="SARI_04099"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99777"
+ gene 4047553..4049946
+ /locus_tag="SARI_04100"
+ CDS 4047553..4049946
+ /locus_tag="SARI_04100"
+ /inference="protein motif:HMMPanther:IPR000811"
+ /inference="protein motif:HMMPfam:IPR000811"
+ /inference="protein motif:HMMPIR:IPR000811"
+ /inference="protein motif:HMMTigr:IPR011833"
+ /inference="protein motif:ScanRegExp:IPR000811"
+ /note="'KEGG: stm:STM3514 0. malP; maltodextrin
+ phosphorylase K00688;
+ COG: COG0058 Glucan phosphorylase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573031.1"
+ /db_xref="GI:161505919"
+ /db_xref="InterPro:IPR000811"
+ /db_xref="InterPro:IPR011833"
+ /translation="MSQPTFNKDQFQAALTRQWQRFGLLSASDMTPRQWWQAVSGALA
+ ELLSAQPVAQPTKGQRHVNYISMEFLIGRLTGNNLLNLGWYQGVSDVLKAHDIHLTDL
+ LEEEIDPALGNGGLGRLAACFLDSMATVGQSATGYGLNYQYGLFRQSFVEGKQMEAPD
+ DWHRGSYPWFRHNEALDVQVGIGGKVTKEGLWEPGFVITGQAWDLPVLGYRNGVAQPL
+ RLWQATHAHPFDLTKFNDGAFLRAEQQGIDAEKLTKVLYPNDNHTAGKKLRLMQQYFQ
+ CACSVADILRRHHLAGRKLHELADYEVIQLNDTHPTIAIPELLRVLLDEHQMSWDDAW
+ AITRNTFAYTNHTLMPEALECWDEKLIKALLPRHMQIIKQINDRFKTLVDNAWPGDKQ
+ VWAKLAVVHNRQVRMANMCVVSGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTN
+ GITPRRWIKQCNPQLAALLDKTLKKEWANDLDQLINLEKYADDAAFRQQYRDIKRANK
+ ERLVKFINARTGIEISSHAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVP
+ RVFLFGAKAAPGYYLAKNIIFAINKVAEAINSDPAVGDKLKVVFLPDYCVSAAEMLIP
+ AADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVE
+ EVKALKAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSLGKQGGDPYL
+ VMADFAAYVEAQKQVDALYRDQEAWTRAAILNTARCGMFSSDRAIRDYQARIWQAKR"
+ misc_feature 4047556..4049943
+ /locus_tag="SARI_04100"
+ /note="maltodextrin phosphorylase; Provisional; Region:
+ PRK14985"
+ /db_xref="CDD:237881"
+ misc_feature 4047586..4049937
+ /locus_tag="SARI_04100"
+ /note="This is a family of oligosaccharide phosphorylases.
+ It includes yeast and mammalian glycogen phosphorylases,
+ plant starch/glucan phosphorylase, as well as the
+ maltodextrin phosphorylases of bacteria. The members of
+ this family catalyze the breakdown of...; Region:
+ GT1_Glycogen_Phosphorylase; cd04300"
+ /db_xref="CDD:99996"
+ misc_feature order(4047586..4047588,4047592..4047594,4047598..4047603,
+ 4047607..4047615,4047682..4047690,4048069..4048071,
+ 4048327..4048329,4048336..4048338)
+ /locus_tag="SARI_04100"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:99996"
+ misc_feature order(4047754..4047756,4047760..4047762,4047892..4047900,
+ 4048321..4048323,4048330..4048332,4048336..4048338,
+ 4048357..4048359,4048474..4048476,4048480..4048482,
+ 4048588..4048593,4048603..4048605,4048900..4048902,
+ 4048921..4048923,4049152..4049157,4049161..4049172,
+ 4049272..4049274,4049287..4049289,4049293..4049295,
+ 4049395..4049400,4049464..4049466,4049470..4049481,
+ 4049488..4049490)
+ /locus_tag="SARI_04100"
+ /note="active site pocket [active]"
+ /db_xref="CDD:99996"
+ gene 4049956..4052034
+ /gene="malQ"
+ /locus_tag="SARI_04101"
+ CDS 4049956..4052034
+ /gene="malQ"
+ /locus_tag="SARI_04101"
+ /inference="protein motif:Gene3D:IPR013781"
+ /inference="protein motif:HMMPfam:IPR003385"
+ /inference="protein motif:HMMTigr:IPR003385"
+ /note="amylomaltase; acts to release glucose from
+ maltodextrins"
+ /codon_start=1
+ /transl_table=11
+ /product="4-alpha-glucanotransferase"
+ /protein_id="YP_001573032.1"
+ /db_xref="GI:161505920"
+ /db_xref="InterPro:IPR003385"
+ /db_xref="InterPro:IPR013781"
+ /translation="MDNKRLDSAALAAGISPSYINAHGKPQSVSAETRRRLLAAMHGT
+ TTGPQAIVPNVKVYTAGKKMTLPVEGHGEFTWLLTTEEGAHYKGRIVGGKKLNLPTTL
+ PEGYHTLTLTQDEQRTHCRIIVAPPRCYEPQALLEGKKLWGACVQLYTLRSEKNWGIG
+ DFGDLKSMLVDVAKRGGAFIGLNPIHALYPANPVSASPYSPSSRRWLNVIYIDVNAVE
+ DFHLSEEAQAWWQMPATQQMLRQARDAQWVDYATVTTLKITALRMAWTRFAARDDAQM
+ AEFCHFVAREGESLYWQAAFDALHAYQVKEDEQRWGWPVWPEAYQSVDSPAVKQFCEA
+ HREEVEFYLWLQWLAWRQFAACWDTCQSFKLPIGLYRDLAVGVAEGGAETWCDRELYC
+ LKASVGAPPDILGPLGQNWGLPPMDPHIMVARAYEPFIDLLRANMQNCGALRIDHVMS
+ LLRLWWIPYGETADRGAYVQYPVDDLLAILALESQRHRCMVIGEDLGTVPVEIVGKLR
+ DSRIYSYKVLWFENDLEKNFRAPGAYPQQSMAVASTHDLPTLRGYWECGDLTLGKALG
+ LYPDEVILRGLYEDRERAKQGLLDALHKYGCLPKRAGHKASLMSMTPTLNRGLQRYIA
+ DSNSGLLGLQPEDWLDMAEPVNVPGTSYQYKNWRRKLSVSLEAMFADEGVNKLIKDLD
+ RRRKAVAKKK"
+ misc_feature 4049956..4052028
+ /gene="malQ"
+ /locus_tag="SARI_04101"
+ /note="4-alpha-glucanotransferase; Provisional; Region:
+ malQ; PRK11052"
+ /db_xref="CDD:236831"
+ misc_feature 4050340..4052022
+ /gene="malQ"
+ /locus_tag="SARI_04101"
+ /note="4-alpha-glucanotransferase [Carbohydrate transport
+ and metabolism]; Region: MalQ; COG1640"
+ /db_xref="CDD:224555"
+ gene complement(4052165..4053481)
+ /locus_tag="SARI_04102"
+ CDS complement(4052165..4053481)
+ /locus_tag="SARI_04102"
+ /inference="protein motif:HMMPfam:IPR003474"
+ /inference="protein motif:HMMTigr:IPR003474"
+ /inference="similar to AA sequence:INSD:AAX67350.1"
+ /note="'KEGG: eci:UTI89_C3106 1.8e-68 ygbN; hypothetical
+ permease YgbN K03299;
+ COG: COG2610 H+/gluconate symporter and related permeases;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573033.1"
+ /db_xref="GI:161505921"
+ /db_xref="InterPro:IPR003474"
+ /translation="MPLVIVAIGVILLLLLMIRFKMNGFIALVLVALAVGLMQGMPLD
+ KVIGSIKTGVGGTLGSLALIMGFGAMLGKMLADCGGAQRIATTLIAKFGKKHIQWAVV
+ LTGFTVGFALFYEVGFVLMLPLVFTIAAAANIPLLYVGVPMAAALSVTHGFLPPHPGP
+ TAIATIFHADMGKTLLFGTILAIPTVILAGPVYARFLKGIDKPIPEGLYSAKTFTEEE
+ MPGFGVSVWTSLVPVILMAMRAIAEMILPKGHAFLPVAEFLGDPVMATLIAVLIAMFT
+ FGLNRGRSMDQINDTLVSSIKIIAMMLLIIGGGGAFKQVLVDSGVDKYIASMMHETNV
+ SPLFMAWSIAAVLRIALGSATVAAITAGGIVAPLIATTGVSPELMVIAVGSGSVIFSH
+ VNDPGFWLFKEYFNLTIGETIKSWSMLETIISVCGLVGCLLLGMVV"
+ misc_feature complement(4052210..4053433)
+ /locus_tag="SARI_04102"
+ /note="high-affinity gluconate transporter; Provisional;
+ Region: PRK14984"
+ /db_xref="CDD:237880"
+ misc_feature complement(4052210..4053433)
+ /locus_tag="SARI_04102"
+ /note="gluconate transporter; Region: gntP; TIGR00791"
+ /db_xref="CDD:129873"
+ gene complement(4053858..4054433)
+ /locus_tag="SARI_04103"
+ CDS complement(4053858..4054433)
+ /locus_tag="SARI_04103"
+ /inference="protein motif:BlastProDom:IPR001075"
+ /inference="protein motif:HMMPanther:IPR000361"
+ /inference="protein motif:HMMPfam:IPR000361"
+ /inference="protein motif:HMMPfam:IPR001075"
+ /inference="similar to AA sequence:INSD:AAX67349.1"
+ /note="cytoplasmic protein that may be involved in the
+ utilization of double-stranded DNA as a carbon source"
+ /codon_start=1
+ /transl_table=11
+ /product="putative DNA uptake protein"
+ /protein_id="YP_001573034.1"
+ /db_xref="GI:161505922"
+ /db_xref="InterPro:IPR000361"
+ /db_xref="InterPro:IPR001075"
+ /translation="MIRISDAAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYC
+ PPDAVEATDTALKFDLLTAYVDELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA
+ DDAPLMERVEYVLQSQINPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDVTLK
+ EGIEKQLLNEFPELKGVRDLTEHQRGEHSYY"
+ misc_feature complement(4053861..4054433)
+ /locus_tag="SARI_04103"
+ /note="Fe/S biogenesis protein NfuA; Provisional; Region:
+ PRK11190"
+ /db_xref="CDD:183027"
+ misc_feature complement(4054143..4054433)
+ /locus_tag="SARI_04103"
+ /note="Fe-S cluster assembly scaffold protein
+ [Posttranslational modification, protein turnover,
+ chaperones]; Region: sufA; COG0316"
+ /db_xref="CDD:223393"
+ misc_feature complement(4053867..4054142)
+ /locus_tag="SARI_04103"
+ /note="Thioredoxin-like proteins and domains
+ [Posttranslational modification, protein turnover,
+ chaperones]; Region: COG0694"
+ /db_xref="CDD:223766"
+ gene complement(4054492..4055223)
+ /locus_tag="SARI_04105"
+ CDS complement(4054492..4055223)
+ /locus_tag="SARI_04105"
+ /inference="protein motif:HMMPfam:IPR000836"
+ /inference="protein motif:HMMTigr:IPR005222"
+ /inference="protein motif:ScanRegExp:IPR002375"
+ /inference="similar to AA sequence:REFSEQ:NP_462413.1"
+ /note="involved in high-affinity gluconate transport"
+ /codon_start=1
+ /transl_table=11
+ /product="gluconate periplasmic binding protein"
+ /protein_id="YP_001573035.1"
+ /db_xref="GI:161505924"
+ /db_xref="InterPro:IPR000836"
+ /db_xref="InterPro:IPR002375"
+ /db_xref="InterPro:IPR005222"
+ /translation="MSFISYCSLLPNKDVPMLTVPGLCWLCQMPLALSHWGICSVCAH
+ AVRQSISLCPQCGLPAAHPSLPCGRCLQKPPPWQRLVSVSDYKPPLSLLVHQLKFTRR
+ SEIAAALARLLLQEVLLARRSAGLQLPDRIVSVPLWPRRHWRRGFNQSDLLCRPLARW
+ LGCAWNSQTITRVRATATQHHLSARLRKRNLKNAFRLELPVRGLHMVIVDDVVTTGST
+ VAEIAQLLLRSGAATVQVWCLCRTL"
+ misc_feature complement(4054495..4055175)
+ /locus_tag="SARI_04105"
+ /note="DNA utilization protein GntX; Provisional; Region:
+ PRK11595"
+ /db_xref="CDD:183221"
+ misc_feature complement(4054507..4054839)
+ /locus_tag="SARI_04105"
+ /note="Phosphoribosyl transferase (PRT)-type I domain;
+ Region: PRTases_typeI; cd06223"
+ /db_xref="CDD:206754"
+ misc_feature complement(order(4054570..4054584,4054588..4054596,
+ 4054789..4054791,4054816..4054818))
+ /locus_tag="SARI_04105"
+ /note="active site"
+ /db_xref="CDD:206754"
+ gene 4055213..4055983
+ /locus_tag="SARI_04104"
+ CDS 4055213..4055983
+ /locus_tag="SARI_04104"
+ /inference="protein motif:HMMPfam:IPR000073"
+ /inference="protein motif:HMMTigr:IPR010076"
+ /inference="similar to AA sequence:SwissProt:Q57IW5"
+ /note="Shows carboxylesterase activity with a preference
+ for short chain fatty acid esters; involved in
+ pimeloyl-CoA synthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="carboxylesterase BioH"
+ /protein_id="YP_001573036.1"
+ /db_xref="GI:161505923"
+ /db_xref="InterPro:IPR000073"
+ /db_xref="InterPro:IPR010076"
+ /translation="MNDIWWQTYGEGNCHLVLLHGWGLNAEVWHCIREELGSHFTLHL
+ IDLPGYGRSTGFGAMTLEEMTAQVAKNAPDQAIWLGWSLGGLVASQMALIHPERVQAL
+ VTVASSPCFSAREGWPGIKPEVLAGFQQQLSDDFERTVERFLALQTLGTETARQDART
+ LKSVVLAQSMPDVEVLNGGLEILKTVDLREPLKSVNMPFLRLYGYLDGLVPRKIAPLL
+ DTLWPHSTSQIIVKAAHAPFISHPAAFCQALAALKSSL"
+ misc_feature 4055213..4055980
+ /locus_tag="SARI_04104"
+ /note="carboxylesterase BioH; Provisional; Region:
+ PRK10349"
+ /db_xref="CDD:137836"
+ misc_feature 4055255..>4055536
+ /locus_tag="SARI_04104"
+ /note="methyl indole-3-acetate methyltransferase; Region:
+ PLN02211; cl17657"
+ /db_xref="CDD:248211"
+ gene complement(4056024..4056209)
+ /locus_tag="SARI_04106"
+ CDS complement(4056024..4056209)
+ /locus_tag="SARI_04106"
+ /inference="protein motif:HMMPfam:IPR006842"
+ /inference="similar to AA sequence:REFSEQ:YP_218427.1"
+ /note="'COG: COG5464 Uncharacterized conserved protein;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573037.1"
+ /db_xref="GI:161505925"
+ /db_xref="InterPro:IPR006842"
+ /translation="MTIAERLRQEGHRNGLQQGKQESQRLAALRIARAMLTDGFDRDT
+ VLRVTGLAPADLTSESH"
+ misc_feature complement(4056027..>4056209)
+ /locus_tag="SARI_04106"
+ /note="hypothetical protein; Provisional; Region:
+ PRK09956"
+ /db_xref="CDD:182167"
+ gene complement(4056267..4056455)
+ /locus_tag="SARI_04107"
+ CDS complement(4056267..4056455)
+ /locus_tag="SARI_04107"
+ /inference="protein motif:HMMPfam:IPR006842"
+ /inference="similar to AA sequence:INSD:CAD08106.1"
+ /note="'COG: COG5464 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573038.1"
+ /db_xref="GI:161505926"
+ /db_xref="InterPro:IPR006842"
+ /translation="MPNDEIMRHHRVALLELIQKHIRQRDLMGLVEQLVALLIKGYAN
+ GTQFQSLFNYMMHTDDAA"
+ misc_feature complement(4056309..>4056455)
+ /locus_tag="SARI_04107"
+ /note="Putative transposase, YhgA-like; Region:
+ Transposase_31; pfam04754"
+ /db_xref="CDD:218244"
+ gene complement(4056694..4056939)
+ /locus_tag="SARI_04108"
+ CDS complement(4056694..4056939)
+ /locus_tag="SARI_04108"
+ /inference="similar to AA sequence:REFSEQ:YP_218426.1"
+ /note="'COG: NOG13904 non supervised orthologous group;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573039.1"
+ /db_xref="GI:161505927"
+ /translation="MQKMASLIQVRDLLALRGRMEATQISHTLRAPQPMIDAMLNQLE
+ IMGKAVRIPEEADGCLSGSCKRCPEGKACLREWWVLR"
+ misc_feature complement(4056697..4056930)
+ /locus_tag="SARI_04108"
+ /note="ferrous iron transport protein FeoC; Provisional;
+ Region: PRK15431"
+ /db_xref="CDD:185329"
+ gene complement(4056943..4059261)
+ /gene="feoB"
+ /locus_tag="SARI_04109"
+ CDS complement(4056943..4059261)
+ /gene="feoB"
+ /locus_tag="SARI_04109"
+ /inference="protein motif:HMMPfam:IPR002917"
+ /inference="protein motif:HMMPfam:IPR011619"
+ /inference="protein motif:HMMPfam:IPR011640"
+ /inference="protein motif:HMMPfam:IPR011642"
+ /inference="protein motif:HMMTigr:IPR003373"
+ /inference="protein motif:HMMTigr:IPR005225"
+ /inference="protein motif:HMMTigr:IPR005289"
+ /note="cytoplasmic membrane ferrous uptake system
+ permease; mutations disrupt the ability of Escherichia
+ coli to take up ferrous iron; GTP-binding protein which
+ requires GTP for efficient iron(II) uptake"
+ /codon_start=1
+ /transl_table=11
+ /product="ferrous iron transport protein B"
+ /protein_id="YP_001573040.1"
+ /db_xref="GI:161505928"
+ /db_xref="InterPro:IPR002917"
+ /db_xref="InterPro:IPR003373"
+ /db_xref="InterPro:IPR005225"
+ /db_xref="InterPro:IPR005289"
+ /db_xref="InterPro:IPR011619"
+ /db_xref="InterPro:IPR011640"
+ /db_xref="InterPro:IPR011642"
+ /translation="MKKLTIGLIGNPNSGKTTLFNQLTGARQRVGNWAGVTVERKEGQ
+ FATTDHQVTLVDLPGTYSLTTISSQTSLDEQIACHYILSGDADLLINVVDASNLERNL
+ YLTLQLLELGIPCIVALNMLDIAEKQQVRIDVDALSMRLGCPVVPLVSTRGRGIEALK
+ LAIDRHNVNDNVELVHYAQPLLREADFLADAMAQEMPLQQRRWLGLQMLEGDIYSQAY
+ AGEAAQNLDTSLARLKDEMDDPALHIADARYQCIAAICDVVSNTLTAEPSRFTTAVDK
+ IILNRFLGLPIFLFVMYLMFLLAINIGGALQPLFDAGSVAIFIHGIQWIGYTLHFPDW
+ LTIFLAQGLGGGINTVLPLVPQIGMMYLFLSFLEDSGYMARAAFVMDRLMQALGLPGK
+ SFVPLIVGFGCNVPSVMGARTLDAPRERLMTIMMAPFMSCGARLAIFAVFAAAFFGQN
+ GALAVFSLYVLGIVMAVLTGLMLKHTIMRGEASPFVMELPVYHVPHIKSLIIQTWQRL
+ KGFVLRAGKVIIIVSIFLSAFNSFSLSGKIVDNINDSALASVSRVITPVFKPIGVHED
+ NWQATVGLFTGAMAKEVVVGTLNTLYTAENIQDEAFNPADFHLGDELLGAVDDTWQSL
+ KDTFSLSVLANPIEASKGDGEMATGAMGVMDQKFGSAAAAYSYLIFVLLYVPCISVMG
+ AISRESSRGWMSFSILWGLNIAYSLATLFYQVTSFSQHPTYSLICILAVIVFNIVVLS
+ LLRRARSRVDIKLLATRKNVSSCCSDTAGNCH"
+ misc_feature complement(4056946..4059261)
+ /gene="feoB"
+ /locus_tag="SARI_04109"
+ /note="ferrous iron transport protein B; Reviewed; Region:
+ feoB; PRK09554"
+ /db_xref="CDD:236563"
+ misc_feature complement(4058767..4059240)
+ /gene="feoB"
+ /locus_tag="SARI_04109"
+ /note="Ferrous iron transport protein B (FeoB) family;
+ Region: FeoB; cd01879"
+ /db_xref="CDD:206667"
+ misc_feature complement(4059211..4059234)
+ /gene="feoB"
+ /locus_tag="SARI_04109"
+ /note="G1 box; other site"
+ /db_xref="CDD:206667"
+ misc_feature complement(order(4058809..4058817,4058893..4058895,
+ 4058899..4058904,4059208..4059219,4059223..4059225))
+ /gene="feoB"
+ /locus_tag="SARI_04109"
+ /note="GTP/Mg2+ binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:206667"
+ misc_feature complement(4059142..4059156)
+ /gene="feoB"
+ /locus_tag="SARI_04109"
+ /note="Switch I region; other site"
+ /db_xref="CDD:206667"
+ misc_feature complement(4059151..4059153)
+ /gene="feoB"
+ /locus_tag="SARI_04109"
+ /note="G2 box; other site"
+ /db_xref="CDD:206667"
+ misc_feature complement(4059085..4059096)
+ /gene="feoB"
+ /locus_tag="SARI_04109"
+ /note="G3 box; other site"
+ /db_xref="CDD:206667"
+ misc_feature complement(order(4059004..4059009,4059019..4059048,
+ 4059061..4059087))
+ /gene="feoB"
+ /locus_tag="SARI_04109"
+ /note="Switch II region; other site"
+ /db_xref="CDD:206667"
+ misc_feature complement(4058893..4058904)
+ /gene="feoB"
+ /locus_tag="SARI_04109"
+ /note="G4 box; other site"
+ /db_xref="CDD:206667"
+ misc_feature complement(4058809..4058817)
+ /gene="feoB"
+ /locus_tag="SARI_04109"
+ /note="G5 box; other site"
+ /db_xref="CDD:206667"
+ misc_feature complement(4057966..4058214)
+ /gene="feoB"
+ /locus_tag="SARI_04109"
+ /note="Nucleoside recognition; Region: Gate; pfam07670"
+ /db_xref="CDD:219507"
+ misc_feature complement(4057741..4057899)
+ /gene="feoB"
+ /locus_tag="SARI_04109"
+ /note="Ferrous iron transport protein B C terminus;
+ Region: FeoB_C; pfam07664"
+ /db_xref="CDD:203715"
+ misc_feature complement(<4057486..4057728)
+ /gene="feoB"
+ /locus_tag="SARI_04109"
+ /note="Nucleoside recognition; Region: Gate; pfam07670"
+ /db_xref="CDD:219507"
+ gene complement(4059280..4059507)
+ /gene="feoA"
+ /locus_tag="SARI_04110"
+ CDS complement(4059280..4059507)
+ /gene="feoA"
+ /locus_tag="SARI_04110"
+ /inference="protein motif:HMMPfam:IPR007167"
+ /inference="protein motif:superfamily:IPR008988"
+ /inference="similar to AA sequence:INSD:AAX67343.1"
+ /note="'COG: COG1918 Fe2+ transport system protein A;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="ferrous iron transport protein A"
+ /protein_id="YP_001573041.1"
+ /db_xref="GI:161505929"
+ /db_xref="InterPro:IPR007167"
+ /db_xref="InterPro:IPR008988"
+ /translation="MQFTPDTAWKITGFAREISPAYRQKLLSLGMLPGSSFNVVRVAP
+ LGDPIHIETRRVSLVLRKKDLALIEVEAVSC"
+ misc_feature complement(4059286..4059507)
+ /gene="feoA"
+ /locus_tag="SARI_04110"
+ /note="ferrous iron transport protein A; Reviewed; Region:
+ feoA; PRK09555"
+ /db_xref="CDD:181949"
+ gene complement(4060033..4062363)
+ /locus_tag="SARI_04111"
+ CDS complement(4060033..4062363)
+ /locus_tag="SARI_04111"
+ /inference="protein motif:Gene3D:IPR012340"
+ /inference="protein motif:HMMPfam:IPR003029"
+ /inference="protein motif:HMMSmart:IPR003029"
+ /inference="protein motif:HMMSmart:IPR006641"
+ /inference="protein motif:superfamily:IPR008994"
+ /inference="protein motif:superfamily:IPR010994"
+ /inference="protein motif:superfamily:IPR012337"
+ /note="'KEGG: bur:Bcep18194_A5099 1.6e-245 RNA binding S1;
+ COG: COG2183 Transcriptional accessory protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573042.1"
+ /db_xref="GI:161505930"
+ /db_xref="InterPro:IPR003029"
+ /db_xref="InterPro:IPR006641"
+ /db_xref="InterPro:IPR008994"
+ /db_xref="InterPro:IPR010994"
+ /db_xref="InterPro:IPR012337"
+ /db_xref="InterPro:IPR012340"
+ /translation="MMNDSFCRIIAGEIQAHAGQVEAAVRLLDEGNTVPFIARYRKEI
+ TGGLDDTQLRNLETRLGYLRELEDRRQAILKSISEQGKLTDELANAINGTLSKTELED
+ LYLPYKPKRRTRGQIAIEAGLEPLADLLWNEPSHDPDVEAAKYIDADNGVADTKAALD
+ GARYILMERFAEDAALLAKVRDYLWKNAHLVATVVSGKEEEGAKFRDYFDHHEPIANV
+ PSHRALAMFRGRNEGILQLSLNADPQFDEPPKESHCEQIILDHLGLRLNNAPADSWRK
+ GVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDP
+ GLRTGVKVAVVDGTGKLVATDTIYPHTGQAAKAATVIAALCEKYHVELVAIGNGTASR
+ ETERFYLEVQKQFPNVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRL
+ QDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTR
+ VAGLTRMMAQNIVAWRDENGQFQNRQQLLKVNRLGPKAFEQCAGFLRINHGDNPLDAS
+ TVHPEAYPVVERILAATQQALKDLMGNSSELRHLKAADFTDDRFGVPTVTDIIKELEK
+ PGRDPRPEFKTAQFADGVETMNDLLPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISS
+ LANKFVDDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETTARRGGGNDRAQ
+ GNRPATKAAKPRGRDAQPVGNSAMMDALAAAMGKKR"
+ misc_feature complement(4060039..4062363)
+ /locus_tag="SARI_04111"
+ /note="Transcriptional accessory protein [Transcription];
+ Region: Tex; COG2183"
+ /db_xref="CDD:225094"
+ misc_feature complement(4061758..4062336)
+ /locus_tag="SARI_04111"
+ /note="Tex-like protein N-terminal domain; Region: Tex_N;
+ pfam09371"
+ /db_xref="CDD:150144"
+ misc_feature complement(4061092..4061385)
+ /locus_tag="SARI_04111"
+ /note="Likely ribonuclease with RNase H fold; Region:
+ YqgFc; smart00732"
+ /db_xref="CDD:128971"
+ misc_feature complement(4060210..4060413)
+ /locus_tag="SARI_04111"
+ /note="S1_Tex: The C-terminal S1 domain of a transcription
+ accessory factor called Tex, which has been characterized
+ in Bordetella pertussis and Pseudomonas aeruginosa. The
+ tex gene is essential in Bortella pertusis and is named
+ for its role in toxin expression; Region: S1_Tex; cd05685"
+ /db_xref="CDD:240190"
+ misc_feature complement(order(4060327..4060329,4060333..4060335,
+ 4060363..4060365,4060387..4060389))
+ /locus_tag="SARI_04111"
+ /note="RNA binding site [nucleotide binding]; other site"
+ /db_xref="CDD:240190"
+ gene complement(4062462..4062935)
+ /gene="greB"
+ /locus_tag="SARI_04112"
+ CDS complement(4062462..4062935)
+ /gene="greB"
+ /locus_tag="SARI_04112"
+ /inference="protein motif:BlastProDom:IPR001437"
+ /inference="protein motif:Gene3D:IPR001437"
+ /inference="protein motif:HMMPfam:IPR001437"
+ /inference="protein motif:HMMPIR:IPR012243"
+ /inference="protein motif:HMMTigr:IPR006358"
+ /inference="protein motif:ScanRegExp:IPR001437"
+ /inference="similar to AA sequence:INSD:CAD08111.1"
+ /note="'necessary for efficient RNA polymerase
+ transcription elongation past template-encoded arresting
+ sites; arresting sites in DNA have the property of
+ trapping a certain fraction of elongating RNA polymerases
+ that pass through, resulting in locked ternary complexes.
+ Cleavage of the nascent transcript by cleavage factors
+ such as GreA or GreB allows the resumption of elongation
+ from the new 3'terminus'"
+ /codon_start=1
+ /transl_table=11
+ /product="transcription elongation factor GreB"
+ /protein_id="YP_001573043.1"
+ /db_xref="GI:161505931"
+ /db_xref="InterPro:IPR001437"
+ /db_xref="InterPro:IPR006358"
+ /db_xref="InterPro:IPR012243"
+ /translation="MKTPLITREGYETLKQELNYLWREERPEVTKKVTWAASLGDRSE
+ NADYQYNKKRLREIDRRVRYLTKCMENLKIVDYAPQQEGKVFFGAWVEIENDDGDTLK
+ FRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPVGEANWYVNAIEYVK"
+ misc_feature complement(4062468..4062935)
+ /gene="greB"
+ /locus_tag="SARI_04112"
+ /note="transcription elongation factor GreB; Reviewed;
+ Region: greB; PRK01885"
+ /db_xref="CDD:179345"
+ misc_feature complement(4062714..4062920)
+ /gene="greB"
+ /locus_tag="SARI_04112"
+ /note="Transcription elongation factor, N-terminal;
+ Region: GreA_GreB_N; pfam03449"
+ /db_xref="CDD:217565"
+ misc_feature complement(4062471..4062698)
+ /gene="greB"
+ /locus_tag="SARI_04112"
+ /note="Transcription elongation factor, GreA/GreB, C-term;
+ Region: GreA_GreB; pfam01272"
+ /db_xref="CDD:201702"
+ gene 4063162..4063881
+ /gene="ompR"
+ /locus_tag="SARI_04113"
+ CDS 4063162..4063881
+ /gene="ompR"
+ /locus_tag="SARI_04113"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:BlastProDom:IPR001867"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR001789"
+ /inference="protein motif:HMMPfam:IPR001867"
+ /inference="protein motif:HMMSmart:IPR001789"
+ /inference="protein motif:superfamily:IPR011006"
+ /inference="similar to AA sequence:INSD:ABP62473.1"
+ /note="part of two-component system EnvZ/OmpR; regulates
+ transcription of outer membrane porin genes ompC/F; under
+ high osmolarity EnvZ functions as
+ kinase/phosphotransferase and phosphorylates OmpR; the
+ result is increased expression of ompC and repression of
+ ompF; also functions in regulation of other genes; forms
+ dimers upon phosphorylation"
+ /codon_start=1
+ /transl_table=11
+ /product="osmolarity response regulator"
+ /protein_id="YP_001573044.1"
+ /db_xref="GI:161505932"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR001867"
+ /db_xref="InterPro:IPR011006"
+ /db_xref="InterPro:IPR011991"
+ /translation="MQENYKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLL
+ TRESFHLMVLDLMLPGEDGLSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGADDY
+ IPKPFNPRELLARIRAVLRRQANELPGAPSQEEAVIAFGKFKLNLGTREMFREDEPMP
+ LTSGEFAVLKALVSHPREPLSRDKLMNLARGREYSAMERSIDVQISRLRRMVEEDPAH
+ PRYIQTVWGLGYVFVPDGSKA"
+ misc_feature 4063162..4063875
+ /gene="ompR"
+ /locus_tag="SARI_04113"
+ /note="osmolarity response regulator; Provisional; Region:
+ ompR; PRK09468"
+ /db_xref="CDD:181883"
+ misc_feature 4063183..4063521
+ /gene="ompR"
+ /locus_tag="SARI_04113"
+ /note="Signal receiver domain; originally thought to be
+ unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
+ recently identified in eukaroytes ETR1 Arabidopsis
+ thaliana; this domain receives the signal from the sensor
+ partner in a two-component systems; Region: REC; cd00156"
+ /db_xref="CDD:238088"
+ misc_feature order(4063192..4063197,4063324..4063326,4063348..4063350,
+ 4063408..4063410,4063465..4063467,4063474..4063479)
+ /gene="ompR"
+ /locus_tag="SARI_04113"
+ /note="active site"
+ /db_xref="CDD:238088"
+ misc_feature 4063324..4063326
+ /gene="ompR"
+ /locus_tag="SARI_04113"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238088"
+ misc_feature order(4063333..4063338,4063342..4063350)
+ /gene="ompR"
+ /locus_tag="SARI_04113"
+ /note="intermolecular recognition site; other site"
+ /db_xref="CDD:238088"
+ misc_feature 4063474..4063482
+ /gene="ompR"
+ /locus_tag="SARI_04113"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238088"
+ misc_feature 4063573..4063857
+ /gene="ompR"
+ /locus_tag="SARI_04113"
+ /note="Effector domain of response regulator. Bacteria and
+ certain eukaryotes like protozoa and higher plants use
+ two-component signal transduction systems to detect and
+ respond to changes in the environment. The system consists
+ of a sensor histidine kinase and...; Region: trans_reg_C;
+ cd00383"
+ /db_xref="CDD:238225"
+ misc_feature order(4063645..4063647,4063702..4063707,4063759..4063761,
+ 4063768..4063770,4063792..4063797,4063831..4063833,
+ 4063846..4063848)
+ /gene="ompR"
+ /locus_tag="SARI_04113"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:238225"
+ gene 4063878..4065230
+ /gene="envZ"
+ /locus_tag="SARI_04114"
+ CDS 4063878..4065230
+ /gene="envZ"
+ /locus_tag="SARI_04114"
+ /inference="protein motif:Gene3D:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003660"
+ /inference="protein motif:HMMPfam:IPR003661"
+ /inference="protein motif:HMMSmart:IPR003594"
+ /inference="protein motif:HMMSmart:IPR003660"
+ /inference="protein motif:HMMSmart:IPR003661"
+ /inference="protein motif:superfamily:IPR003594"
+ /inference="protein motif:superfamily:IPR009000"
+ /inference="protein motif:superfamily:IPR009082"
+ /inference="similar to AA sequence:INSD:AAV79179.1"
+ /note="membrane-localized osmosensor; histidine kinase; in
+ high osmolarity EnvZ autophosphorylates itself and
+ transfers phosphoryl group to OmpR"
+ /codon_start=1
+ /transl_table=11
+ /product="osmolarity sensor protein"
+ /protein_id="YP_001573045.1"
+ /db_xref="GI:161505933"
+ /db_xref="InterPro:IPR003594"
+ /db_xref="InterPro:IPR003660"
+ /db_xref="InterPro:IPR003661"
+ /db_xref="InterPro:IPR009000"
+ /db_xref="InterPro:IPR009082"
+ /translation="MRRMRFSPRSSFARTLLLIVTLLFVSLVTTYLVVLNFAILPSLQ
+ QFNKVLAYEVRMLMTDKLQLEDGTQLVVPPAFRREIYRELGISLYSNEAAEEAGLRWA
+ QHYEFLSHQMAQQLGGPTEVRVEVNKSSPVVWLKTWLSPNIWVRVPLTEIHQGDFSPL
+ FRYTLAIMLLAIGGAWLFIRIQNRPLVDLEHAALQVGKGIIPPPLREYGASEVRSVTR
+ AFNHMAAGVKQLADDRTLLMAGVSHDLRTPLTRIRLATEMMGEEDGYLAESINKDIEE
+ CNAIIEQFIDYLRTGQEMPMEMADLNSVLGEVIAAESGYEREINTALQAGSIQVKMHP
+ LSIKRAVANMVVNAARYGNGWIKVSSGTESHRAWFQVEDDGPGIKPEQRKNLFQPFVR
+ GDSARSTSGTGLGLAIVQRIIDNHNGMLEIGTSERGGLSIRAWLPVPVARVQGATKEA
+ "
+ misc_feature 4063983..4065194
+ /gene="envZ"
+ /locus_tag="SARI_04114"
+ /note="osmolarity sensor protein; Provisional; Region:
+ envZ; PRK09467"
+ /db_xref="CDD:236531"
+ misc_feature 4064427..4064564
+ /gene="envZ"
+ /locus_tag="SARI_04114"
+ /note="Histidine kinase, Adenylyl cyclase,
+ Methyl-accepting protein, and Phosphatase (HAMP) domain.
+ HAMP is a signaling domain which occurs in a wide variety
+ of signaling proteins, many of which are bacterial. The
+ HAMP domain consists of two alpha helices...; Region:
+ HAMP; cd06225"
+ /db_xref="CDD:100122"
+ misc_feature order(4064433..4064438,4064442..4064447,4064454..4064459,
+ 4064463..4064465,4064511..4064516,4064520..4064525,
+ 4064532..4064537,4064541..4064546,4064553..4064558)
+ /gene="envZ"
+ /locus_tag="SARI_04114"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:100122"
+ misc_feature 4064577..4064744
+ /gene="envZ"
+ /locus_tag="SARI_04114"
+ /note="Histidine Kinase A (dimerization/phosphoacceptor)
+ domain; Histidine Kinase A dimers are formed through
+ parallel association of 2 domains creating 4-helix
+ bundles; usually these domains contain a conserved His
+ residue and are activated via...; Region: HisKA; cd00082"
+ /db_xref="CDD:119399"
+ misc_feature order(4064586..4064588,4064598..4064600,4064610..4064612,
+ 4064619..4064621,4064631..4064633,4064640..4064642,
+ 4064673..4064675,4064685..4064687,4064694..4064696,
+ 4064706..4064708,4064715..4064717,4064727..4064729)
+ /gene="envZ"
+ /locus_tag="SARI_04114"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119399"
+ misc_feature 4064604..4064606
+ /gene="envZ"
+ /locus_tag="SARI_04114"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:119399"
+ misc_feature 4064931..4065185
+ /gene="envZ"
+ /locus_tag="SARI_04114"
+ /note="Histidine kinase-like ATPases; This family includes
+ several ATP-binding proteins for example: histidine
+ kinase, DNA gyrase B, topoisomerases, heat shock protein
+ HSP90, phytochrome-like ATPases and DNA mismatch repair
+ proteins; Region: HATPase_c; cd00075"
+ /db_xref="CDD:238030"
+ misc_feature order(4064988..4064990,4064994..4064996,4065000..4065002,
+ 4065006..4065011,4065084..4065095,4065141..4065143,
+ 4065147..4065149,4065162..4065167,4065171..4065173)
+ /gene="envZ"
+ /locus_tag="SARI_04114"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature order(4065000..4065002,4065006..4065008,4065084..4065086,
+ 4065090..4065092)
+ /gene="envZ"
+ /locus_tag="SARI_04114"
+ /note="G-X-G motif; other site"
+ /db_xref="CDD:238030"
+ gene complement(4065333..4066952)
+ /locus_tag="SARI_04115"
+ CDS complement(4065333..4066952)
+ /locus_tag="SARI_04115"
+ /inference="protein motif:BlastProDom:IPR008210"
+ /inference="protein motif:HMMPfam:IPR001272"
+ /inference="protein motif:HMMTigr:IPR001272"
+ /inference="protein motif:ScanRegExp:IPR001272"
+ /inference="similar to AA sequence:INSD:CAD08114.1"
+ /note="PEP carboxykinase; PEP carboxylase; PEPCK;
+ catalyzes the phosphorylation and decarboxylation of
+ oxaloacetate to form phosphoenolpyruvate using ATP"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphoenolpyruvate carboxykinase"
+ /protein_id="YP_001573046.1"
+ /db_xref="GI:161505934"
+ /db_xref="InterPro:IPR001272"
+ /db_xref="InterPro:IPR008210"
+ /translation="MRVNNLTPQDLKAYGINDVQDIVYNPSYDTLYQEELNPGLEGYE
+ RGVLTNLGAVAVDTGIFTGRSPKDKYIVRDDTTRDTLWWSDKGKGKNDNKPLSQETWQ
+ HLKDLVTHQLSGKRLFVVDAFCGANADTRLSVRFITEVAWQAHFVKNMFIRPTDEELV
+ NFKPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERIQLIGGTWYGGEMKKGMFSVM
+ NYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDG
+ VFNFEGGCYAKTIKLSKEAEPEIYHAIRRDALLENVTVREDGTVDFDDGSKTENTRVS
+ YPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTANQTQYHFLSGFTAKLAG
+ TERGVTEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQAAGAQAYLVNTGWNGTGKRIS
+ IKDTRAIIDAILNGSLDNAETFRLPLFDLAIPTELPGVDTRILDPRNTYASPEQWQEK
+ ATALAKLFIENFEKYTDTPAGEALVTAGPKL"
+ misc_feature complement(4065477..4066901)
+ /locus_tag="SARI_04115"
+ /note="Phosphoenolpyruvate carboxykinase; Region:
+ PEPCK_ATP; pfam01293"
+ /db_xref="CDD:216417"
+ misc_feature complement(4065345..4066889)
+ /locus_tag="SARI_04115"
+ /note="Phosphoenolpyruvate carboxykinase (PEPCK), a
+ critical gluconeogenic enzyme, catalyzes the first
+ committed step in the diversion of tricarboxylic acid
+ cycle intermediates toward gluconeogenesis. It catalyzes
+ the reversible decarboxylation and...; Region: PEPCK_ATP;
+ cd00484"
+ /db_xref="CDD:238270"
+ misc_feature complement(order(4065591..4065593,4065600..4065602,
+ 4065609..4065611,4065957..4065959,4066065..4066067,
+ 4066092..4066094,4066098..4066100,4066149..4066154,
+ 4066188..4066208,4066260..4066262,4066317..4066322,
+ 4066329..4066331,4066335..4066337,4066761..4066763))
+ /locus_tag="SARI_04115"
+ /note="active site"
+ /db_xref="CDD:238270"
+ misc_feature complement(order(4065957..4065959,4066098..4066100,
+ 4066317..4066322,4066329..4066331,4066335..4066337,
+ 4066761..4066763))
+ /locus_tag="SARI_04115"
+ /note="substrate-binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:238270"
+ misc_feature complement(order(4066098..4066100,4066149..4066154,
+ 4066191..4066193,4066260..4066262,4066317..4066319))
+ /locus_tag="SARI_04115"
+ /note="metal-binding site [ion binding]"
+ /db_xref="CDD:238270"
+ misc_feature complement(order(4065591..4065593,4065609..4065611,
+ 4066065..4066067,4066188..4066208))
+ /locus_tag="SARI_04115"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238270"
+ gene 4067371..4069041
+ /locus_tag="SARI_04116"
+ CDS 4067371..4069041
+ /locus_tag="SARI_04116"
+ /inference="similar to AA sequence:INSD:AAL22361.1"
+ /note="'COG: NOG06297 non supervised orthologous group;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573047.1"
+ /db_xref="GI:161505935"
+ /translation="MMLTGLLQGVLCYLLMAWLVPQNSDWLFYGMPATIALSSMLLLT
+ VVSFKQGALWGWLALIFVVVLAMSGWLKWQAEAMDKWRQVDLLWQYGLRLVFMAMLVL
+ PWIQYQLHPQTGSARYLQFYMQLWHNVLTLFIALVANGLFWLVLLLWSALFRLVGIRF
+ FSTLFFETEGFIYVTIGLITALAVILARTQSRLVAAVQKLLTLIATGLLPVVSLLALL
+ FIVTLPFTGLEAISARVSAAGLLSTLTLMLLLLVAIVNEPQKRVLPYPRVLRGMISAS
+ LCVAPIYMLLAGWALWVRIQQYGWTPDRLYGALTVSVLLVWSFGYLIGLLRRGRDPGE
+ WQGKVILSVSLLTLVILLLLASPVLDVWRISVNSHMARYHSGKITADQISLYMLDHSG
+ KPGQEALKSLRDDEAFTQNRKRNRELMTFLQRNKVSPTADDLARVVMIAPGSQKPDAA
+ FWAFVKEQSYSDDSCLEPDACVLVSQDLNGDGQPEQVLYNFIVAESQVYGLKEGKWTQ
+ KAFARLPDGFSKTQLLRAIAGHRLDSAPKAWRDIIVDGKRLDVNYYNE"
+ misc_feature 4067836..4068498
+ /locus_tag="SARI_04116"
+ /note="Domain of unknown function (DUF4153); Region:
+ DUF4153; pfam13687"
+ /db_xref="CDD:222319"
+ gene complement(4069135..4070019)
+ /gene="hslO"
+ /locus_tag="SARI_04117"
+ CDS complement(4069135..4070019)
+ /gene="hslO"
+ /locus_tag="SARI_04117"
+ /inference="protein motif:HMMPfam:IPR000397"
+ /inference="similar to AA sequence:INSD:AAL22360.1"
+ /note="'becomes active under oxidative stress; four
+ conserved cysteines bind a zinc atom when they are in the
+ reduced state and the enzyme is inactive; oxidative stress
+ results in oxidized cysteines, release of zinc, and
+ binding of Hsp33 to aggregation-prone proteins; forms
+ dimers and higher order oligomers'"
+ /codon_start=1
+ /transl_table=11
+ /product="Hsp33-like chaperonin"
+ /protein_id="YP_001573048.1"
+ /db_xref="GI:161505936"
+ /db_xref="InterPro:IPR000397"
+ /translation="MIMPQHDQLHRYLFENFAVRGELVTVSETLQQILDHHNYPQPVK
+ TVLAELLVATSLLTATLKFAGDITVQLQGDGPLSLAVINGNNQQQMRGVARVQGDIPD
+ NADLKTLVGNGYLVITITPEEGERYQGVVGLEGDTLAACLEDYFLRSEQLPTRLFIRT
+ GDVDGKPAAGGMLLQVMPAQNAQAEDFDHLAMLTETIKSEELLTLPANDVLWRLYHEE
+ EVTLYDPQDVEFKCTCSRERCAGALKTLPDEEVDSILAEEGEIDMHCDYCGNHYLFNA
+ MDIAELRNNASPADPQVH"
+ misc_feature complement(4069159..4070007)
+ /gene="hslO"
+ /locus_tag="SARI_04117"
+ /note="Hsp33-like chaperonin; Reviewed; Region: hslO;
+ PRK00114"
+ /db_xref="CDD:234643"
+ misc_feature complement(4069195..4069995)
+ /gene="hslO"
+ /locus_tag="SARI_04117"
+ /note="Heat shock protein 33 (Hsp33): Cytosolic protein
+ that acts as a molecular chaperone under oxidative
+ conditions. In normal (reducing) cytosolic conditions,
+ four conserved Cys residues are coordinated by a Zn ion.
+ Under oxidative stress (such as heat...; Region: Hsp33;
+ cd00498"
+ /db_xref="CDD:238278"
+ misc_feature complement(order(4069324..4069326,4069495..4069497,
+ 4069567..4069575,4069585..4069587,4069960..4069962))
+ /gene="hslO"
+ /locus_tag="SARI_04117"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238278"
+ misc_feature complement(order(4069486..4069497,4069507..4069509,
+ 4069513..4069515,4069960..4069962))
+ /gene="hslO"
+ /locus_tag="SARI_04117"
+ /note="domain crossover interface; other site"
+ /db_xref="CDD:238278"
+ misc_feature complement(order(4069216..4069218,4069225..4069227,
+ 4069318..4069320,4069324..4069326))
+ /gene="hslO"
+ /locus_tag="SARI_04117"
+ /note="redox-dependent activation switch; other site"
+ /db_xref="CDD:238278"
+ gene complement(4070038..4070439)
+ /locus_tag="SARI_04118"
+ CDS complement(4070038..4070439)
+ /locus_tag="SARI_04118"
+ /inference="protein motif:HMMPfam:IPR002942"
+ /inference="protein motif:HMMSmart:IPR002942"
+ /inference="similar to AA sequence:INSD:AAL22359.1"
+ /note="'COG: COG1188 Ribosome-associated heat shock
+ protein implicated in the recycling of the 50S subunit (S4
+ paralog);
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="ribosome-associated heat shock protein Hsp15"
+ /protein_id="YP_001573049.1"
+ /db_xref="GI:161505937"
+ /db_xref="InterPro:IPR002942"
+ /translation="MKEKSSVEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSK
+ PGKIVELNATLTLRQGNDERTVIVKAITEQRRPASEAVALYEETAESVEKREKMAQAR
+ KLNALTMPHPDRRPDKKERRDLLRFKHGDSE"
+ misc_feature complement(4070233..4070415)
+ /locus_tag="SARI_04118"
+ /note="S4/Hsp/ tRNA synthetase RNA-binding domain; The
+ domain surface is populated by conserved, charged residues
+ that define a likely RNA-binding site; Found in stress
+ proteins, ribosomal proteins and tRNA synthetases; This
+ may imply a hitherto unrecognized...; Region: S4; cd00165"
+ /db_xref="CDD:238095"
+ misc_feature complement(order(4070290..4070292,4070296..4070313,
+ 4070314..4070316,4070335..4070337,4070341..4070346,
+ 4070353..4070358,4070362..4070367,4070371..4070376,
+ 4070410..4070412))
+ /locus_tag="SARI_04118"
+ /note="RNA binding surface [nucleotide binding]; other
+ site"
+ /db_xref="CDD:238095"
+ gene complement(4070450..4071118)
+ /locus_tag="SARI_04119"
+ CDS complement(4070450..4071118)
+ /locus_tag="SARI_04119"
+ /inference="protein motif:HMMPfam:IPR005834"
+ /inference="protein motif:HMMTigr:IPR006402"
+ /inference="similar to AA sequence:INSD:AAL22358.1"
+ /note="'KEGG: rso:RSc2880 5.8e-06 gph, RS00222; probable
+ phosphoglycolate phosphatase protein K01091;
+ COG: COG1011 Predicted hydrolase (HAD superfamily);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative hydrolase"
+ /protein_id="YP_001573050.1"
+ /db_xref="GI:161505938"
+ /db_xref="InterPro:IPR005834"
+ /db_xref="InterPro:IPR006402"
+ /translation="MHIDIDWQNVDTVLLDMDGTLLDLAFDNYFWQKLVPETYGAQQG
+ ISPQDAQEYIRQQYHAVQHTLNWYCLDYWSERLGLDICAMTTAQGPRAVLRDDTVPFL
+ NALKASGKRRILLTNAHPHNLAVKLEHTGLASHLDLLLSTHTFGYPKEDQRLWRAVTE
+ ETGISAEKTLFIDDSEPILDAAARFGIRYCLGVTNPDSGQAEKQYTRHPSLNDYRRLI
+ PSLM"
+ misc_feature complement(4070546..4071085)
+ /locus_tag="SARI_04119"
+ /note="haloacid dehalogenase superfamily, subfamily IA,
+ variant 3 with third motif having DD or ED; Region:
+ HAD-SF-IA-v3; TIGR01509"
+ /db_xref="CDD:233443"
+ misc_feature complement(4070555..4070839)
+ /locus_tag="SARI_04119"
+ /note="Haloacid dehalogenase-like hydrolases. The haloacid
+ dehalogenase-like (HAD) superfamily includes L-2-haloacid
+ dehalogenase, epoxide hydrolase, phosphoserine
+ phosphatase, phosphomannomutase, phosphoglycolate
+ phosphatase, P-type ATPase, and many others; Region:
+ HAD_like; cd01427"
+ /db_xref="CDD:119389"
+ misc_feature complement(4070771..4070773)
+ /locus_tag="SARI_04119"
+ /note="motif II; other site"
+ /db_xref="CDD:119389"
+ gene complement(4071183..4073315)
+ /locus_tag="SARI_04120"
+ CDS complement(4071183..4073315)
+ /locus_tag="SARI_04120"
+ /inference="protein motif:HMMPfam:IPR010771"
+ /note="'COG: NOG06324 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573051.1"
+ /db_xref="GI:161505939"
+ /db_xref="InterPro:IPR010771"
+ /translation="MSTILIFIAALLACSLLAVWRFRVKSRRGSLPWISAFQDAQTRK
+ LLPEERSAVENYLDNLSQIQQVPGPTGASSAPISLTLNAESSSVVILNHSITRYGITT
+ DDPNKWRYYLDSVEVHLPPFWEQYINDENNIELIFTDTLPLVISLNGHTLQEYMQESR
+ GYALQNPASAQASIRGEESEQIELLNIRQETHEEYMLSRPAGLREALLIVTSFFLFFF
+ CLITPDVFVPWMIGGAILLLSAGLWGLFAPPSKSALREIHCLRGTPRRWGLFGENNQE
+ QINNISLGIIDLIYPAHWQPYITKDLGQQTDIDIYLDRHVARQGRFLSLHDEVKNFPL
+ QHWLRSTVIAIGSLLVLFMLLFWIPLDMPIKFTLSWMKGAQTIEATTVKQLEKAGVRV
+ GDTLHLSGKGMCNIHSGATWSGQSNSPFMPFDCSQIIWNDAPALPLPESDLVNKAMAL
+ SQAVNRQLHPKPEDDSRVSASLRSAIQKSGMVLLDDFGDIVLKTADLCATEDECVRLK
+ NALVNLGNSKDWSALVKRANAGKLDGVNVLLRPVSAESLENLVTTSTAPFISRETARA
+ AQSLNSPAPGGFLIVSDEGSELVDQAWPSTPLYDYPAQEQWSAFQRLAQTLMQTPFSA
+ EGIVTSVYTDANGTQHIGLHRIPDKSGWWRYLGTTLLMLAMIVSAVYNGIQAFRRYQR
+ HRTRMADIQEYYESCLNPRLTISPENLI"
+ misc_feature complement(4071207..4073315)
+ /locus_tag="SARI_04120"
+ /note="Intracellular growth attenuator protein IgaA;
+ Region: IgaA; pfam07095"
+ /db_xref="CDD:219294"
+ gene 4073604..4074200
+ /gene="nudE"
+ /locus_tag="SARI_04121"
+ CDS 4073604..4074200
+ /gene="nudE"
+ /locus_tag="SARI_04121"
+ /inference="protein motif:Gene3D:IPR000086"
+ /inference="protein motif:HMMPfam:IPR000086"
+ /inference="protein motif:ScanRegExp:IPR000086"
+ /inference="protein motif:superfamily:IPR000086"
+ /inference="similar to AA sequence:INSD:AAL22356.1"
+ /note="ADP-sugar pyrophosphatase; catalyzes the formation
+ of D-ribose 5-phosphate from ADP-ribose; can also act on
+ ADP-mannose and ADP-glucose"
+ /codon_start=1
+ /transl_table=11
+ /product="ADP-ribose diphosphatase NudE"
+ /protein_id="YP_001573052.1"
+ /db_xref="GI:161505940"
+ /db_xref="InterPro:IPR000086"
+ /translation="MTTDFTAKILTMSKSLQKPTILKVETVAQSRLFNVESVDLEFSN
+ GVRRVYERMRPSTREAVMIVPIVDEHLILIREYAVGTESYELGFSKGLIDPGETVFEA
+ ANRELKEEVGFGAHNLTFLKKLSMAPSYFSSKMNIVVAEDLYPESLEGDEPEPLPQVR
+ WPMAHIMDLLEEPDFNEARNVSALFLVREWLKAQGRIA"
+ misc_feature 4073637..4074188
+ /gene="nudE"
+ /locus_tag="SARI_04121"
+ /note="adenosine nucleotide hydrolase NudE; Provisional;
+ Region: nudE; PRK11762"
+ /db_xref="CDD:183303"
+ misc_feature 4073781..4074173
+ /gene="nudE"
+ /locus_tag="SARI_04121"
+ /note="ADP-ribose pyrophosphatase (ADPRase) catalyzes the
+ hydrolysis of ADP-ribose and a variety of additional
+ ADP-sugar conjugates to AMP and ribose-5-phosphate. Like
+ other members of the Nudix hydrolase superfamily, it
+ requires a divalent cation, such as Mg2+; Region:
+ ADPRase_NUDT5; cd03424"
+ /db_xref="CDD:239516"
+ misc_feature order(4073781..4073783,4073835..4073837,4073877..4073879,
+ 4073919..4073921,4073931..4073933,4074000..4074002)
+ /gene="nudE"
+ /locus_tag="SARI_04121"
+ /note="ADP-ribose binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:239516"
+ misc_feature order(4073826..4073828,4073832..4073834,4073838..4073840,
+ 4073853..4073855,4073970..4073981,4073985..4073987,
+ 4073991..4074005,4074063..4074068,4074072..4074074,
+ 4074111..4074116,4074135..4074137,4074147..4074149,
+ 4074156..4074158,4074168..4074173)
+ /gene="nudE"
+ /locus_tag="SARI_04121"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:239516"
+ misc_feature order(4073835..4073837,4073871..4073879,4073919..4073921,
+ 4073931..4073933,4074000..4074002,4074063..4074065)
+ /gene="nudE"
+ /locus_tag="SARI_04121"
+ /note="active site"
+ /db_xref="CDD:239516"
+ misc_feature order(4073874..4073885,4073889..4073942)
+ /gene="nudE"
+ /locus_tag="SARI_04121"
+ /note="nudix motif; other site"
+ /db_xref="CDD:239516"
+ misc_feature order(4073919..4073921,4073931..4073933,4074063..4074065)
+ /gene="nudE"
+ /locus_tag="SARI_04121"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:239516"
+ gene complement(4074297..4076849)
+ /gene="mrcA"
+ /locus_tag="SARI_04122"
+ CDS complement(4074297..4076849)
+ /gene="mrcA"
+ /locus_tag="SARI_04122"
+ /inference="protein motif:BlastProDom:IPR001264"
+ /inference="protein motif:HMMPfam:IPR001264"
+ /inference="protein motif:HMMPfam:IPR001460"
+ /inference="protein motif:HMMTigr:IPR011816"
+ /inference="protein motif:superfamily:IPR012338"
+ /note="bifunctional murein transglycosylase/murein
+ transpeptidase; penicillin-binding protein 1A; involved in
+ the synthesis of cross-linked peptidoglycan from the lipid
+ intermediates in cell wall formation;
+ penicillin-insensitive transglycosylase catalyzes the
+ formation of linear glycan strands and the
+ penicillin-sensitive transpeptidase catalyzes the
+ cross-linking of the peptide subunits"
+ /codon_start=1
+ /transl_table=11
+ /product="peptidoglycan synthetase"
+ /protein_id="YP_001573053.2"
+ /db_xref="GI:228879514"
+ /db_xref="InterPro:IPR001264"
+ /db_xref="InterPro:IPR001460"
+ /db_xref="InterPro:IPR011816"
+ /db_xref="InterPro:IPR012338"
+ /translation="MKFVKYLLILAVCCILLGAGSIYGLYRYIEPQLPDVATLKDVRL
+ QIPMQVYSADGELIAQYGEKRRIPVTLDQIPPEMINAFIATEDSRFYEHHGVDPVGIF
+ RAASVALFSGHASQGASTITQQLARNFFLSPERTLMRKIKEAFLAIRIEQLLNKNEIL
+ ELYLNKIYLGYRAYGVGAAAQVYFGKTVDQLTLSEMAVIAGLPKAPSTFNPLYSMDRA
+ TARRNVVLSRMLSEGYITQAQYDQARSEPIEANYHAPEIAFSAPYLSEMVRQEMYNRY
+ GESAYEDGYRIYTTITRKVQQAAQQAVRNNVLNYDMRHGYRGPTNVLWKVGETAWDSK
+ KITDTLKALPTYGPLLPAVITSANPQEATAALADGTSVSLRMEGMRWARPYRSDTQQG
+ PTPRKVTDVVQTGQQIWVRQVDNDWWLAQVPEVNSALVSLNPQTGAVLALVGGFDFNQ
+ SKFNRATQALRQVGSNIKPFLYTAAMDKGLTLASILNDVPISRWDAGAGSDWRPKNSP
+ PQYAGPIRLRQGLGQSKNVVMVRAMRAMGVDYAAEYLQRFGFPAQNIVHTESLALGSA
+ SFTPMQVARGYAVMANGGFLIDPYFISKIENDQGGVIFESKPKIACPECDIPVIYGNT
+ QKSNVLENTNVEEVAVSQEQQNSAVPMPKLEQANQALVAQNGAQEYAPHVINTPLAFL
+ IKSALNTNIFGEPGWMGTGWRAARDLKRRDIGGKTGTTNNSKDAWFSGYGPGVVTSVW
+ IGFDDHRRDLGRTTASGAIKDQISGYEGGAKSAQPAWDAYMKAVLEGVPEQPLTPPPG
+ VVTVNIDRSTGQLANGGNSREEYFIEGTQPTQQAVHEVGTTIIDNGETHELF"
+ misc_feature complement(4074300..4076849)
+ /gene="mrcA"
+ /locus_tag="SARI_04122"
+ /note="penicillin-binding protein 1a; Provisional; Region:
+ mrcA; PRK11636"
+ /db_xref="CDD:183248"
+ misc_feature complement(4076160..4076690)
+ /gene="mrcA"
+ /locus_tag="SARI_04122"
+ /note="Transglycosylase; Region: Transgly; pfam00912"
+ /db_xref="CDD:201501"
+ misc_feature complement(<4075059..4075568)
+ /gene="mrcA"
+ /locus_tag="SARI_04122"
+ /note="Penicillin binding protein transpeptidase domain;
+ Region: Transpeptidase; cl17760"
+ /db_xref="CDD:248314"
+ gene 4076970..4077749
+ /locus_tag="SARI_04123"
+ CDS 4076970..4077749
+ /locus_tag="SARI_04123"
+ /inference="similar to AA sequence:INSD:CAD08122.1"
+ /note="'COG: NOG05966 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573054.1"
+ /db_xref="GI:161505942"
+ /translation="MAFKTWQIGLHIQPHEALAIAVVRGASGWSLQRWWRLPLMNAST
+ AEGTIPDPQSLAHVLRPWSRELPLRHRIHLSFPAHRTLQRAFPHPPMRLREREQLAWL
+ SQTMARELDMDADLLRFDFQDDALSPAFNVTAAQGKEISALLTLAQTLKVRIAAVTPD
+ ACALQRLLPFIPPGRQCLVWRDEGQWLWATRYAWGRKLAREAATLHDLAATLSVMPEH
+ IALCAEGEFDPWRAVIVRQPPVPPDGYRFAIALGLAMGEIR"
+ gene 4077749..4078288
+ /locus_tag="SARI_04124"
+ CDS 4077749..4078288
+ /locus_tag="SARI_04124"
+ /inference="protein motif:HMMPfam:IPR007813"
+ /inference="similar to AA sequence:INSD:AAV79170.1"
+ /note="'COG: COG3166 Tfp pilus assembly protein PilN;
+ Psort location: golgi, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573055.1"
+ /db_xref="GI:161505943"
+ /db_xref="InterPro:IPR007813"
+ /translation="MAHSVNLLPWRRQHYVARLRLWCVIWGASLLLIASFATIARSVF
+ LQEGRINELLLAAENGRTTALAANMPRLQQRQRQQQARLQHQAQRELTQGWQSILTDL
+ ANLLPDQAWLTSLNYQQETLELEGLARTFGDLLTLETSLRHYANFPLNRTGATRQDAQ
+ GRWQFQYQLTRSVARERAL"
+ misc_feature 4077749..4078285
+ /locus_tag="SARI_04124"
+ /note="Tfp pilus assembly protein PilN [Cell motility and
+ secretion / Intracellular trafficking and secretion];
+ Region: PilN; COG3166"
+ /db_xref="CDD:225707"
+ misc_feature 4078040..4078261
+ /locus_tag="SARI_04124"
+ /note="Fimbrial assembly protein (PilN); Region: PilN;
+ pfam05137"
+ /db_xref="CDD:218459"
+ gene 4078272..4078745
+ /locus_tag="SARI_04125"
+ CDS 4078272..4078745
+ /locus_tag="SARI_04125"
+ /inference="similar to AA sequence:INSD:CAD08124.1"
+ /note="'COG: NOG13913 non supervised orthologous group;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573056.2"
+ /db_xref="GI:448236291"
+ /translation="MNALFDIWCGMSRRCRGGCWCAGVLCLTLTVALSVGYPGWKTLD
+ MQHTRLSQQREAARQQWRNLRRLSVAAEPLFGRTTENTRPFSPLDFQTPHQRLLHWLP
+ SAQGGEMALKTSWEGVPSLFVRLAESEMSVSRFSLRREGAELLMTLQLERLANEG"
+ gene 4078735..4079136
+ /locus_tag="SARI_04126"
+ CDS 4078735..4079136
+ /locus_tag="SARI_04126"
+ /inference="similar to AA sequence:REFSEQ:YP_218408.1"
+ /note="'COG: NOG12171 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573057.1"
+ /db_xref="GI:161505945"
+ /translation="MKASRSVLLCFCLLTLTGMRDPFHPPEDRCRIAELSQWRYQGAV
+ RKGTRWIGILKDSQQKWRRVEEGQMLENGWMIVRLTAQALTLTTGKNCTPSQWRWLRQ
+ GADNEAMDSHNTDGLDARRAGGKSGERDAGG"
+ misc_feature 4078738..4079133
+ /locus_tag="SARI_04126"
+ /note="Protein of unknown function (DUF2531); Region:
+ DUF2531; pfam10748"
+ /db_xref="CDD:220868"
+ gene 4079087..4080289
+ /gene="hofQ"
+ /locus_tag="SARI_04127"
+ CDS 4079087..4080289
+ /gene="hofQ"
+ /locus_tag="SARI_04127"
+ /inference="protein motif:FPrintScan:IPR001775"
+ /inference="protein motif:FPrintScan:IPR001814"
+ /inference="protein motif:HMMPfam:IPR004846"
+ /inference="protein motif:HMMPfam:IPR005644"
+ /inference="protein motif:HMMPfam:IPR011662"
+ /inference="protein motif:HMMTigr:IPR013355"
+ /inference="protein motif:ScanRegExp:IPR004845"
+ /inference="similar to AA sequence:REFSEQ:NP_458416.1"
+ /note="outer membrane porin probably involved in uptake of
+ extracellular double-stranded DNA; similar to outer
+ membrane competence protein ComE from Haemophilus
+ influenzae and outer membrane protein PilQ involved in
+ type IV pilus production from Pseudomonas aeruginosa"
+ /codon_start=1
+ /transl_table=11
+ /product="outer membrane porin HofQ"
+ /protein_id="YP_001573058.1"
+ /db_xref="GI:161505946"
+ /db_xref="InterPro:IPR001775"
+ /db_xref="InterPro:IPR001814"
+ /db_xref="InterPro:IPR004845"
+ /db_xref="InterPro:IPR004846"
+ /db_xref="InterPro:IPR005644"
+ /db_xref="InterPro:IPR011662"
+ /db_xref="InterPro:IPR013355"
+ /translation="MPAAQAGKAANVTLVVDDVPVVQVLQALAEQERQNLVASPDVSG
+ TLSLHLMDVPWRQALQTVASSAGLVLRQEGNILHVHSQAWQKEHHARQDAERLKLQAN
+ LPLENRSISLQYADAAELAKAGEKLLSAKGTITVDKRTNRLLLRDNRTALAELEKWVS
+ QMDLPVAQVELAAHIVTINEKSLRELGVKWTLADAQQAGAVGDVTMLSSDLSVAAATS
+ RVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSG
+ ESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEI
+ ETQVEVKSGETLALGGIFSRKNKSGRDSVPLLGDIPWLGQLFRHDGKEDERRELVVFI
+ TPRLVATE"
+ misc_feature 4079165..4080286
+ /gene="hofQ"
+ /locus_tag="SARI_04127"
+ /note="outer membrane porin HofQ; Provisional; Region:
+ hofQ; PRK10560"
+ /db_xref="CDD:182549"
+ misc_feature 4079798..4080277
+ /gene="hofQ"
+ /locus_tag="SARI_04127"
+ /note="Bacterial type II and III secretion system protein;
+ Region: Secretin; pfam00263"
+ /db_xref="CDD:215826"
+ gene 4080754..4081275
+ /gene="aroK"
+ /locus_tag="SARI_04128"
+ CDS 4080754..4081275
+ /gene="aroK"
+ /locus_tag="SARI_04128"
+ /inference="protein motif:HMMPfam:IPR000623"
+ /inference="protein motif:ScanRegExp:IPR000623"
+ /inference="similar to AA sequence:INSD:AAO71489.1"
+ /note="type I enzyme similar to type II but differentially
+ regulated; major shikimate kinase in fully repressed
+ cells; catalyzes the formation of shikimate 3-phosphate
+ from shikimate in aromatic amino acid biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="shikimate kinase I"
+ /protein_id="YP_001573059.1"
+ /db_xref="GI:161505947"
+ /db_xref="InterPro:IPR000623"
+ /translation="MAEKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTG
+ ADVGWVFDVEGEDGFRNREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVY
+ LETTIEKQLARTQRDKKRPLLQVEAPPREVLEALANERNPLYEEIADVTIRTDDQSAK
+ VVANQIIHMLESN"
+ misc_feature 4080754..4081269
+ /gene="aroK"
+ /locus_tag="SARI_04128"
+ /note="shikimate kinase; Reviewed; Region: aroK; PRK00131"
+ /db_xref="CDD:234654"
+ misc_feature 4080769..4081227
+ /gene="aroK"
+ /locus_tag="SARI_04128"
+ /note="Shikimate kinase (SK) is the fifth enzyme in the
+ shikimate pathway, a seven-step biosynthetic pathway which
+ converts erythrose-4-phosphate to chorismic acid, found in
+ bacteria, fungi and plants. Chorismic acid is a important
+ intermediate in the synthesis...; Region: SK; cd00464"
+ /db_xref="CDD:238260"
+ misc_feature order(4080793..4080810,4081090..4081092,4081111..4081113)
+ /gene="aroK"
+ /locus_tag="SARI_04128"
+ /note="ADP binding site [chemical binding]; other site"
+ /db_xref="CDD:238260"
+ misc_feature order(4080805..4080807,4080853..4080855,4080859..4080861)
+ /gene="aroK"
+ /locus_tag="SARI_04128"
+ /note="magnesium binding site [ion binding]; other site"
+ /db_xref="CDD:238260"
+ misc_feature order(4080859..4080861,4080931..4080933,4080940..4080942,
+ 4080994..4081002,4081171..4081173)
+ /gene="aroK"
+ /locus_tag="SARI_04128"
+ /note="putative shikimate binding site; other site"
+ /db_xref="CDD:238260"
+ gene 4081332..4082420
+ /gene="aroB"
+ /locus_tag="SARI_04129"
+ CDS 4081332..4082420
+ /gene="aroB"
+ /locus_tag="SARI_04129"
+ /inference="protein motif:HMMPfam:IPR002658"
+ /inference="protein motif:HMMTigr:IPR002658"
+ /inference="similar to AA sequence:INSD:AAX67324.1"
+ /note="catalyzes the formation of 3-dehydroquinate from
+ 3-deoxy-arabino-heptulonate 7-phosphate; functions in
+ aromatic amino acid biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="3-dehydroquinate synthase"
+ /protein_id="YP_001573060.1"
+ /db_xref="GI:161505948"
+ /db_xref="InterPro:IPR002658"
+ /translation="MERITVTLGERSYPITIAAGLFNEPASFLPLKSGDQVMLVTNET
+ LAPLYLDKVRGVLQRAGVNVDSVILPDGERYKSLTVLDTVFTALLKKPHGRDTTLVAL
+ GGGVIGDLTGFAAASYQRGVRFIQVPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQP
+ ASVVVDLDCLKTLPARELASGLAEVIKYGIILDADFFTWLEGNLDALLRLDGPAMAYC
+ IRRCCELKAEVVAADEREAGLRALLNLGHTFGHAIEAEMGYGNWLHGEAVAAGMVMAA
+ CTSERLGQFSSADTQRIIALLRRAGLPVNGPREMSAQAYLPHMLRDKKVLAGELRLVL
+ PLAIGKSEVRGGVSHEVVLSAIADCQQA"
+ misc_feature 4081365..4082399
+ /gene="aroB"
+ /locus_tag="SARI_04129"
+ /note="Dehydroquinate synthase (DHQS) catalyzes the
+ conversion of DAHP to DHQ in shikimate pathway for
+ aromatic compounds synthesis; Region: DHQS; cd08195"
+ /db_xref="CDD:173954"
+ misc_feature order(4081455..4081457,4081641..4081649,4081656..4081658,
+ 4081665..4081667,4081716..4081721,4081725..4081727,
+ 4081782..4081784,4081791..4081793,4081836..4081838,
+ 4081860..4081862,4081881..4081883,4081893..4081895,
+ 4082070..4082072,4082082..4082084,4082121..4082123)
+ /gene="aroB"
+ /locus_tag="SARI_04129"
+ /note="active site"
+ /db_xref="CDD:173954"
+ misc_feature order(4081563..4081565,4081584..4081589,4081668..4081670,
+ 4081677..4081679,4081683..4081691,4081755..4081760,
+ 4081785..4081802)
+ /gene="aroB"
+ /locus_tag="SARI_04129"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:173954"
+ misc_feature order(4081881..4081883,4082070..4082072,4082121..4082123)
+ /gene="aroB"
+ /locus_tag="SARI_04129"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:173954"
+ gene 4082518..4083789
+ /locus_tag="SARI_04130"
+ CDS 4082518..4083789
+ /locus_tag="SARI_04130"
+ /inference="protein motif:HMMPfam:IPR007730"
+ /inference="similar to AA sequence:INSD:AAL22347.1"
+ /note="'KEGG: cal:orf19.1327 7.5e-07 RBT1; repressed by
+ Tup1, related to HWP1 K01186;
+ COG: COG3266 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573061.1"
+ /db_xref="GI:161505949"
+ /db_xref="InterPro:IPR007730"
+ /translation="MDEFKPEDELKPDPSDRRTGRSRQSSERDNEPQINFDDVDLDAD
+ DRRPTRARKARSEEPEVEEEYESDEDDTVVEERVDRRPRKRKKAAHKPASRQYMMMGV
+ GILVLLLLIIGIGSALKAPSTSSSEPATSGEKSIDLSGNAADQANATQPAPGTTSAEQ
+ TAGNTSQDISLPPISSTPTQGQSPVVTDGQQRVEVQGDLNNALTQNPEQMNNVALNST
+ LPTEPATVAPVRNGSALRQAAVREPAERHTTRPERKQAVIEPKKPQTTAKTTTAEPKK
+ PATPVKSTEPAATPKATTAPTAAPKVTASAAPVQTAKPAQASTTPVAGGGKSAGNVGA
+ LKSAPSSHYTLQLSSSSNYDNLNGWAKKENLKNYVVYETTRNGQPWYVLVTGVYASKE
+ DAKRAVSTLPADVQAKNPWAKPLHQVQADLK"
+ misc_feature 4082803..4083786
+ /locus_tag="SARI_04130"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: DamX; COG3266"
+ /db_xref="CDD:225805"
+ misc_feature 4082863..4083786
+ /locus_tag="SARI_04130"
+ /note="cell division protein DamX; Validated; Region:
+ PRK10905"
+ /db_xref="CDD:236792"
+ gene 4083970..4084806
+ /locus_tag="SARI_04131"
+ CDS 4083970..4084806
+ /locus_tag="SARI_04131"
+ /inference="protein motif:HMMPfam:IPR012327"
+ /inference="protein motif:HMMPIR:IPR012263"
+ /inference="protein motif:HMMTigr:IPR012326"
+ /inference="protein motif:ScanRegExp:IPR002052"
+ /inference="similar to AA sequence:INSD:AAX67322.1"
+ /note="'KEGG: stm:STM3484 3.4e-147 dam; DNA adenine
+ methylase K06223;
+ COG: COG0338 Site-specific DNA methylase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA adenine methylase"
+ /protein_id="YP_001573062.1"
+ /db_xref="GI:161505950"
+ /db_xref="InterPro:IPR002052"
+ /db_xref="InterPro:IPR012263"
+ /db_xref="InterPro:IPR012326"
+ /db_xref="InterPro:IPR012327"
+ /db_xref="REBASE:M.StyAZDamP"
+ /translation="MKKNRAFLKWAGGKYPLLDDIKRHLPKGDCLVEPFVGAGSVFLN
+ TDFSRYILADINSDLISLYNIVKSRTDEYVQASRELFMPETNQAEVYYQLREEFNTCQ
+ DPFRRAVLFLYLNRYGYNGLCRYNLRGEFNVPFGRYKKPYFPEAELYHFAEKAQNAFF
+ YCESYADSMARADKSSVVYCDPPYAPLSATANFTAYHTNSFSLTQQAHLAEIAENLVS
+ NRIPVLISNHDTVLTREWYQLAKLHVVKVRRSISSNGGTRKKVDELLALYQPGVVSPA
+ KR"
+ misc_feature 4083970..4084782
+ /locus_tag="SARI_04131"
+ /note="DNA adenine methylase; Provisional; Region:
+ PRK10904"
+ /db_xref="CDD:182825"
+ gene 4084824..4085501
+ /locus_tag="SARI_04132"
+ CDS 4084824..4085501
+ /locus_tag="SARI_04132"
+ /inference="protein motif:HMMPanther:IPR000056"
+ /inference="protein motif:HMMPfam:IPR000056"
+ /inference="protein motif:HMMTigr:IPR000056"
+ /inference="protein motif:ScanRegExp:IPR000056"
+ /inference="protein motif:superfamily:IPR011060"
+ /inference="similar to AA sequence:INSD:AAL22345.1"
+ /note="catalyzes the interconversion of D-ribulose
+ 5-phosphate to xylulose 5-phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="ribulose-phosphate 3-epimerase"
+ /protein_id="YP_001573063.1"
+ /db_xref="GI:161505951"
+ /db_xref="InterPro:IPR000056"
+ /db_xref="InterPro:IPR011060"
+ /translation="MKQYLIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVP
+ NLTIGPMVLKSLRQYGITAPIDVHLMVKPVDRIVPDFAAAGSSIITFHPEASEHVDRT
+ LQLIKEHGCKAGLVFNPATPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLRE
+ VRRRIDESGYDIRLEVDGGVKVNNIGEIAAAGADMFVAGSAIFDKPDYKQVIDEMRSE
+ LAKVSHG"
+ misc_feature 4084836..4085471
+ /locus_tag="SARI_04132"
+ /note="Ribulose-5-phosphate 3-epimerase (RPE). This enzyme
+ catalyses the interconversion of D-ribulose 5-phosphate
+ (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin
+ cycle (reductive pentose phosphate pathway) in
+ chloroplasts and in the oxidative pentose...; Region: RPE;
+ cd00429"
+ /db_xref="CDD:238244"
+ misc_feature 4084839..4085471
+ /locus_tag="SARI_04132"
+ /note="ribulose-phosphate 3-epimerase; Region: rpe;
+ TIGR01163"
+ /db_xref="CDD:130231"
+ misc_feature order(4084848..4084850,4084854..4084856,4084929..4084931,
+ 4085031..4085033,4085250..4085255,4085259..4085264,
+ 4085352..4085354,4085358..4085360,4085418..4085423)
+ /locus_tag="SARI_04132"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:238244"
+ misc_feature order(4084869..4084871,4084878..4084880,4084938..4084940,
+ 4084944..4084949,4084953..4084955,4084959..4084970,
+ 4085040..4085042,4085052..4085054,4085115..4085117,
+ 4085121..4085126,4085178..4085180,4085187..4085189,
+ 4085193..4085195,4085205..4085207,4085247..4085249,
+ 4085274..4085276,4085280..4085282,4085292..4085294)
+ /locus_tag="SARI_04132"
+ /note="hexamer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238244"
+ misc_feature order(4084923..4084925,4084929..4084931,4085025..4085027,
+ 4085352..4085354)
+ /locus_tag="SARI_04132"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:238244"
+ gene 4085494..4086252
+ /locus_tag="SARI_04133"
+ CDS 4085494..4086252
+ /locus_tag="SARI_04133"
+ /inference="protein motif:HMMPfam:IPR005834"
+ /inference="protein motif:HMMTigr:IPR006346"
+ /inference="protein motif:HMMTigr:IPR006402"
+ /inference="protein motif:HMMTigr:IPR006439"
+ /inference="similar to AA sequence:REFSEQ:YP_152473.1"
+ /note="catalyzes the dephosphorylation of
+ 2-phosphoglycolate to form glycolate and phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphoglycolate phosphatase"
+ /protein_id="YP_001573064.1"
+ /db_xref="GI:161505952"
+ /db_xref="InterPro:IPR005834"
+ /db_xref="InterPro:IPR006346"
+ /db_xref="InterPro:IPR006402"
+ /db_xref="InterPro:IPR006439"
+ /translation="MDKLQNIRGVALDLDGTLVDSAPGLAAAVDMALYALELPVAGEE
+ RVITWIGNGADVLMERALAWARQERAALRKTMGKPPVDDDIPAEEQVRILRKLFDRYY
+ GVVAEEGTFLFPHVADTLGALHANGLPLGLVTNKPTPFVAPLLEALDIAKYFSVVIGG
+ DDVQNKKPHPDPLLLVASRMGIAPEQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYGE
+ AISLSEPDVIYDSFNDILPALGLPHSDNQEIKND"
+ misc_feature 4085500..4086225
+ /locus_tag="SARI_04133"
+ /note="phosphoglycolate phosphatase; Provisional; Region:
+ PRK13222"
+ /db_xref="CDD:237310"
+ misc_feature 4085782..4086120
+ /locus_tag="SARI_04133"
+ /note="Haloacid dehalogenase-like hydrolases. The haloacid
+ dehalogenase-like (HAD) superfamily includes L-2-haloacid
+ dehalogenase, epoxide hydrolase, phosphoserine
+ phosphatase, phosphomannomutase, phosphoglycolate
+ phosphatase, P-type ATPase, and many others; Region:
+ HAD_like; cd01427"
+ /db_xref="CDD:119389"
+ misc_feature 4085893..4085895
+ /locus_tag="SARI_04133"
+ /note="motif II; other site"
+ /db_xref="CDD:119389"
+ gene 4086245..4087249
+ /locus_tag="SARI_04134"
+ CDS 4086245..4087249
+ /locus_tag="SARI_04134"
+ /inference="protein motif:HMMPfam:IPR002305"
+ /inference="protein motif:HMMTigr:IPR002306"
+ /inference="protein motif:ScanRegExp:IPR001412"
+ /inference="similar to AA sequence:INSD:AAL22343.1"
+ /note="'catalyzes a two-step reaction, first charging a
+ tryptophan molecule by linking its carboxyl group to the
+ alpha-phosphate of ATP, followed by transfer of the
+ aminoacyl-adenylate to its tRNA'"
+ /codon_start=1
+ /transl_table=11
+ /product="tryptophanyl-tRNA synthetase"
+ /protein_id="YP_001573065.1"
+ /db_xref="GI:161505953"
+ /db_xref="InterPro:IPR001412"
+ /db_xref="InterPro:IPR002305"
+ /db_xref="InterPro:IPR002306"
+ /translation="MTKPIVFSGAQPSGELTIGNYMGALRQWVNMQDDYHCIYCIVDQ
+ HAITVRQDAQQLRKATLDTLALYLACGIDPEKSTIFVQSHVPEHAQLGWALNCYTYFG
+ ELSRMTQFKDKSARYAENINAGLFDYPVLMAADILLYQTNLVPVGEDQKQHLELSRDI
+ AQRFNALYGDIFKVPEPFIPKSGARVMSLLEPTKKMSKSDDNRNNVIGLLEDPKSVVK
+ KIKRAVTDSDEPPVVRYDVKEKAGVSNLLDILSAVTGQSVPELEKQFEGKMYGHLKGE
+ VAEAVSGMLSELQERYHRFRNDEAFLQKVMKDGAEKARARAAETLKAVYEAIGFVAKP
+ "
+ misc_feature 4086248..4087231
+ /locus_tag="SARI_04134"
+ /note="tryptophanyl-tRNA synthetase II; Reviewed; Region:
+ PRK12282"
+ /db_xref="CDD:183400"
+ misc_feature 4086257..4087096
+ /locus_tag="SARI_04134"
+ /note="catalytic core domain of tryptophanyl-tRNA
+ synthetase; Region: TrpRS_core; cd00806"
+ /db_xref="CDD:173903"
+ misc_feature order(4086263..4086277,4086293..4086295,4086299..4086304,
+ 4086311..4086313,4086362..4086364,4086377..4086379,
+ 4086488..4086490,4086626..4086628,4086638..4086640,
+ 4086647..4086649,4086674..4086676,4086680..4086685,
+ 4086689..4086694,4086701..4086703,4086797..4086799,
+ 4086827..4086832,4086836..4086838)
+ /locus_tag="SARI_04134"
+ /note="active site"
+ /db_xref="CDD:173903"
+ misc_feature 4086293..4086304
+ /locus_tag="SARI_04134"
+ /note="HIGH motif; other site"
+ /db_xref="CDD:173903"
+ misc_feature order(4086374..4086376,4086383..4086388,4086506..4086511,
+ 4086515..4086523,4086530..4086535,4086539..4086550,
+ 4086554..4086559,4086614..4086616,4086620..4086625,
+ 4086632..4086637)
+ /locus_tag="SARI_04134"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:173903"
+ misc_feature 4086827..4086841
+ /locus_tag="SARI_04134"
+ /note="KMSKS motif; other site"
+ /db_xref="CDD:173903"
+ gene complement(4087410..4088783)
+ /gene="cysG"
+ /locus_tag="SARI_04135"
+ CDS complement(4087410..4088783)
+ /gene="cysG"
+ /locus_tag="SARI_04135"
+ /inference="protein motif:HMMPfam:IPR000878"
+ /inference="protein motif:HMMPIR:IPR012409"
+ /inference="protein motif:HMMTigr:IPR006366"
+ /inference="protein motif:HMMTigr:IPR006367"
+ /inference="protein motif:ScanRegExp:IPR003043"
+ /inference="protein motif:superfamily:IPR000878"
+ /inference="similar to AA sequence:SwissProt:P25924"
+ /note="'multifunction enzyme consisting of
+ uroporphyrin-III C-methyltransferase, precorrin-2
+ dehydrogenase and sirohydrochlorin ferrochelatase;
+ catalyzes the methylation of uroporphyrinogen III to form
+ precorrin-2, then catalyzes formation of sirohydrochlorin
+ from precorrin-2 and finally catalyzed the formation of
+ siroheme from sirohydrochlorin'"
+ /codon_start=1
+ /transl_table=11
+ /product="siroheme synthase"
+ /protein_id="YP_001573066.1"
+ /db_xref="GI:161505954"
+ /db_xref="InterPro:IPR000878"
+ /db_xref="InterPro:IPR003043"
+ /db_xref="InterPro:IPR006366"
+ /db_xref="InterPro:IPR006367"
+ /db_xref="InterPro:IPR012409"
+ /translation="MDHLPIFCQLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALT
+ FIPQFTVWADEGMLTLVEGPFDEALLDPCWLAIAATDDDAVNQHVSEAAESRRIFCNV
+ VDAPKAASFIMPSIIDRSPLMVAVSSGGTSPVLARLLREKLESILPQHLGQVAQYAGQ
+ LRARVKKQFITMGERRRFWEKFFVNDRLAQSLANADEKAVNATTEQLFSEPLDHRGEV
+ VLVGAGPGDAGLLTLKGLQQIQQADIVVYDRLVSDDIMNLVRRDADRVFVGKRAGYHC
+ VPQEEINQILLREAQKGKRVVRLKGGDPFIFGRGGEELETLCHAGIPFSVVPGITAAS
+ GCSAYSGLPLTHRDYAQSVRLVTGHLKTGGELDWENLAAEKQTLVFYMGLNQAATIQE
+ KLIAFGMQADMPVALVENGTSIKQRVVNGELAQLGELAKQVASPALIIVGRVVGLRDK
+ LNWFSSH"
+ misc_feature complement(4087413..4088783)
+ /gene="cysG"
+ /locus_tag="SARI_04135"
+ /note="siroheme synthase; Provisional; Region: cysG;
+ PRK10637"
+ /db_xref="CDD:182606"
+ misc_feature complement(4088439..4088768)
+ /gene="cysG"
+ /locus_tag="SARI_04135"
+ /note="Putative NAD(P)-binding; Region: NAD_binding_7;
+ pfam13241"
+ /db_xref="CDD:222002"
+ misc_feature complement(4088157..4088339)
+ /gene="cysG"
+ /locus_tag="SARI_04135"
+ /note="Sirohaem synthase dimerisation region; Region:
+ CysG_dimeriser; pfam10414"
+ /db_xref="CDD:204480"
+ misc_feature complement(4087446..4088135)
+ /gene="cysG"
+ /locus_tag="SARI_04135"
+ /note="Uroporphyrin-III C-methyltransferase
+ (S-Adenosyl-L-methionine:uroporphyrinogen III
+ methyltransferase, SUMT); Region: SUMT; cd11642"
+ /db_xref="CDD:212501"
+ misc_feature complement(order(4087470..4087481,4087545..4087547,
+ 4087551..4087556,4087560..4087562,4087632..4087646,
+ 4087707..4087709,4087713..4087715,4087776..4087778,
+ 4087788..4087793,4087857..4087868,4087875..4087883,
+ 4088034..4088042,4088109..4088111))
+ /gene="cysG"
+ /locus_tag="SARI_04135"
+ /note="active site"
+ /db_xref="CDD:212501"
+ misc_feature complement(order(4087470..4087478,4087551..4087556,
+ 4087560..4087562,4087641..4087643,4087788..4087793,
+ 4087863..4087868,4087875..4087883,4088109..4088111))
+ /gene="cysG"
+ /locus_tag="SARI_04135"
+ /note="SAM binding site [chemical binding]; other site"
+ /db_xref="CDD:212501"
+ misc_feature complement(order(4087719..4087733,4087743..4087751,
+ 4087755..4087757,4087779..4087784,4087794..4087796,
+ 4087800..4087802,4087806..4087808,4087827..4087832,
+ 4087842..4087844,4087848..4087853,4087863..4087871,
+ 4087875..4087877,4088076..4088078,4088082..4088099))
+ /gene="cysG"
+ /locus_tag="SARI_04135"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:212501"
+ gene complement(4088795..4089604)
+ /locus_tag="SARI_04136"
+ CDS complement(4088795..4089604)
+ /locus_tag="SARI_04136"
+ /inference="protein motif:HMMPfam:IPR000292"
+ /inference="protein motif:HMMTigr:IPR000292"
+ /inference="protein motif:ScanRegExp:IPR000292"
+ /inference="similar to AA sequence:REFSEQ:YP_218397.1"
+ /note="member of the FNT family of formate and nitrite
+ transporters"
+ /codon_start=1
+ /transl_table=11
+ /product="nitrite transporter NirC"
+ /protein_id="YP_001573067.1"
+ /db_xref="GI:161505955"
+ /db_xref="InterPro:IPR000292"
+ /translation="MFTDTINKCAANAARIARLSANDPLGFWVSSAMAGAYVGLGIIL
+ IFTLGNLLDPSVRPLVMGATFGIALTLVIIAGSELFTGHTMFLTLGVKAGTISHGQMW
+ AILPQTWLGNLVGSVFVALLYSWGGGSLLPVDTSIVHSVALAKTTAPATVLFFKGALC
+ NWLVCLAIWMAIRTEGTAKFLAIWWCLLAFIASGYEHSIANMTLFALSWFGHHSDAYT
+ LAGIGHNLLWVTLGNTLSGVVFMGLGYWYATPKSERPVPQKINHIKVTANH"
+ misc_feature complement(4088801..4089604)
+ /locus_tag="SARI_04136"
+ /note="nitrite transporter NirC; Provisional; Region:
+ PRK11562"
+ /db_xref="CDD:183200"
+ gene 4089714..4089872
+ /locus_tag="SARI_04137"
+ CDS 4089714..4089872
+ /locus_tag="SARI_04137"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573068.1"
+ /db_xref="GI:161505956"
+ /translation="MSLTEGSQRLFKFVPDEFVAQLPPRCSTNDFVITIKMKKIQKRG
+ GVAPPKIN"
+ gene complement(4089869..4090195)
+ /gene="nirD"
+ /locus_tag="SARI_04138"
+ CDS complement(4089869..4090195)
+ /gene="nirD"
+ /locus_tag="SARI_04138"
+ /inference="protein motif:HMMTigr:IPR012748"
+ /inference="similar to AA sequence:INSD:ABF05415.1"
+ /note="'involved in reducing nitrite to ammonium to
+ detoxify nitrite accumulation in anaerobic
+ nitrate-respiring cells and regenerate NAD+; bounds to
+ NirB, the cytoplasmic subunit, whose expression is induced
+ at high nitrate concentrations'"
+ /codon_start=1
+ /transl_table=11
+ /product="nitrite reductase small subunit"
+ /protein_id="YP_001573069.1"
+ /db_xref="GI:161505957"
+ /db_xref="InterPro:IPR012748"
+ /translation="MSQWQNICNIDDILPETGVCALLGDEQVAIFRPYHSDQVFAISN
+ IDPFFEASVLSRGLIAEHQGELWVASPLKKQRFRLSDGLCMEDEQFSVKHYEARVKDG
+ VVQLRG"
+ misc_feature complement(4089878..4090186)
+ /gene="nirD"
+ /locus_tag="SARI_04138"
+ /note="Assimilatory nitrite reductase (NirD) family,
+ Rieske domain; Assimilatory nitrate and nitrite reductases
+ convert nitrate through nitrite to ammonium. Members
+ include bacterial and fungal proteins. The bacterial NirD
+ contains a single Rieske domain while...; Region:
+ Rieske_NirD; cd03529"
+ /db_xref="CDD:239605"
+ gene complement(4090192..4092735)
+ /locus_tag="SARI_04140"
+ CDS complement(4090192..4092735)
+ /locus_tag="SARI_04140"
+ /inference="protein motif:BlastProDom:IPR001327"
+ /inference="protein motif:HMMPfam:IPR001327"
+ /inference="protein motif:HMMPfam:IPR005117"
+ /inference="protein motif:HMMPfam:IPR006067"
+ /inference="protein motif:HMMPfam:IPR007419"
+ /inference="protein motif:HMMPfam:IPR013027"
+ /inference="protein motif:HMMTigr:IPR012744"
+ /inference="protein motif:ScanRegExp:IPR006066"
+ /note="'KEGG: stm:STM3474 0. nirB; nitrite reductase,
+ large subunit K00362;
+ COG: COG1251 NAD(P)H-nitrite reductase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573070.1"
+ /db_xref="GI:161505959"
+ /db_xref="InterPro:IPR001327"
+ /db_xref="InterPro:IPR005117"
+ /db_xref="InterPro:IPR006066"
+ /db_xref="InterPro:IPR006067"
+ /db_xref="InterPro:IPR007419"
+ /db_xref="InterPro:IPR012744"
+ /db_xref="InterPro:IPR013027"
+ /translation="MSKVRLAIIGNGMVGHRFIEDLLDKSDASLFDITVFCEEPRKAY
+ DRVHLSSYFSHHTAEELSLVREGFYEKHGVKVLVGERAITINRQEKVIHSSAGRTVYY
+ DKLIMATGSYPWIPPIKGSETQDCFVYRTIEDLNAIESCARRSKRGAVVGGGLLGLEA
+ AGALKNLGVETHVIEFAPMLMAEQLDQMGGEQLRRKIESMGVRVHTSKNTQEIVQQGT
+ EARKTMRFADGSELEVDFIVFSTGIRPRDKLATQCGLAVAQRGGIVINDTCQTSDPDI
+ YAIGECASWNNRVYGLVAPGYKMAQVAVDHILGRENAFEGADLSAKLKLLGVDVGGIG
+ DAHGRTPGARSYVYLDESKEVYKRLIVSQDNKTLLGAVLVGDTRDYGNLLQLVLNAIE
+ LPENPDSLILPSHAGSGKPSIGVDKLPDSAQICSCFDVTKGDLIAAINKGCHTVAALK
+ AETKAGTGCGGCIPLVTQVLNAELAKQGIEVNNNLCEHFAYSRQELFHLIRVEGIKTF
+ EELLAKHGKGYGCEVCKPTVGSLLASCWNEYILKPQHTPLQDTNDNFLANIQKDGTYS
+ VIPRSAGGEITPEGLVAVGRIAREFNLYTKITGSQRIGLFGAQKDDLPEIWRQLIEAG
+ FETGHAYAKALRMAKTCVGSTWCRYGVGDSVGFGVELENRYKGIRTPHKMKFGVSGCT
+ RECAEAQGKDVGIIATEKGWNLYVCGNGGMKPRHADLLAADLDRETLIKYLDRFMMFY
+ IRTADKLTRTAPWLDNLEGGIDYLKSVIIDDKLGLNEHLEEEMARLRAAVICEWTETV
+ NTPAAQVRFKHFINSDKRDPNVQVVPEREQHRPATPYERIPVTLVEENA"
+ misc_feature complement(4090195..4092735)
+ /locus_tag="SARI_04140"
+ /note="nitrite reductase subunit NirD; Provisional;
+ Region: PRK14989"
+ /db_xref="CDD:184951"
+ misc_feature complement(4092049..>4092243)
+ /locus_tag="SARI_04140"
+ /note="Pyridine nucleotide-disulphide oxidoreductase;
+ Region: Pyr_redox; pfam00070"
+ /db_xref="CDD:215691"
+ misc_feature complement(4091314..4091472)
+ /locus_tag="SARI_04140"
+ /note="BFD-like [2Fe-2S] binding domain; Region: Fer2_BFD;
+ pfam04324"
+ /db_xref="CDD:218027"
+ misc_feature complement(4091128..4091280)
+ /locus_tag="SARI_04140"
+ /note="BFD-like [2Fe-2S] binding domain; Region: Fer2_BFD;
+ pfam04324"
+ /db_xref="CDD:218027"
+ misc_feature complement(4090867..4091058)
+ /locus_tag="SARI_04140"
+ /note="Nitrite/Sulfite reductase ferredoxin-like half
+ domain; Region: NIR_SIR_ferr; pfam03460"
+ /db_xref="CDD:217572"
+ gene 4092688..4092864
+ /locus_tag="SARI_04139"
+ CDS 4092688..4092864
+ /locus_tag="SARI_04139"
+ /inference="similar to AA sequence:REFSEQ:YP_218394.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573071.1"
+ /db_xref="GI:161505958"
+ /translation="MADHTITDNSESDFAHFCLDFFSITAYLNDSATPLIDVNQIHLY
+ IPLNRYMADLSGFL"
+ gene complement(4092923..4093060)
+ /locus_tag="SARI_04141"
+ CDS complement(4092923..4093060)
+ /locus_tag="SARI_04141"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573072.1"
+ /db_xref="GI:161505960"
+ /translation="MRSALCHVIANIAHRLRIDNECRMAASPYPARYFFPPPDWVGLV
+ I"
+ gene complement(4093005..4094186)
+ /locus_tag="SARI_04142"
+ CDS complement(4093005..4094186)
+ /locus_tag="SARI_04142"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="similar to AA sequence:REFSEQ:YP_152466.1"
+ /note="'COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573073.1"
+ /db_xref="GI:161505961"
+ /db_xref="InterPro:IPR011701"
+ /translation="MTNSNRIKLTWISFLSYALTGALVIVTGMVMGNIADYFHLPVSN
+ MSNTFTFLNAGILISIFLNAWLMEIVPLKTQLRFGFILMILAVAGLMLSHSLALFSAA
+ MFVLGLVSGITMSIGTFLITQLYEGRQRGSRLLFTDSFFSMAGMVFPMVAAFLLARSI
+ EWYWVYACIGLVYLAIFILTFGCEFPALGKHAQHSQAPAAKEKWGIGVLFLAVAALCY
+ ILGQLGFISWVPEYAKGLGMSLNDAGALVSDFWMSYMFGMWAFSFILRFFDLQRILTV
+ LAGMATVLMYLFITGTQAHMPWFILTLGFFSSAIYTSIITLGSQQTKVASPKLVNFIL
+ TCGTIGTMLTFVVTGPIVAYSGPQAALLTANGLYAVVFVMCFALGFVSRHRQHSASAA
+ H"
+ misc_feature complement(4093008..4094183)
+ /locus_tag="SARI_04142"
+ /note="putative transporter; Provisional; Region:
+ PRK03699"
+ /db_xref="CDD:235151"
+ misc_feature complement(4093053..4094159)
+ /locus_tag="SARI_04142"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature complement(order(4093164..4093166,4093173..4093178,
+ 4093185..4093190,4093197..4093202,4093230..4093232,
+ 4093239..4093244,4093254..4093256,4093263..4093268,
+ 4093275..4093277,4093413..4093415,4093425..4093427,
+ 4093434..4093436,4093446..4093448,4093458..4093460,
+ 4093497..4093499,4093506..4093511,4093518..4093523,
+ 4093530..4093532,4093752..4093754,4093770..4093775,
+ 4093782..4093787,4093821..4093823,4093830..4093835,
+ 4093842..4093847,4093854..4093859,4093995..4094000,
+ 4094004..4094009,4094019..4094021,4094028..4094033,
+ 4094040..4094042,4094091..4094096,4094100..4094108,
+ 4094115..4094117))
+ /locus_tag="SARI_04142"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene 4094462..4095034
+ /locus_tag="SARI_04143"
+ CDS 4094462..4095034
+ /locus_tag="SARI_04143"
+ /inference="protein motif:Gene3D:IPR002130"
+ /inference="protein motif:HMMPfam:IPR002130"
+ /inference="protein motif:ScanRegExp:IPR002130"
+ /inference="protein motif:superfamily:IPR002130"
+ /inference="similar to AA sequence:REFSEQ:NP_462375.1"
+ /note="'KEGG: stm:STM3472 7.3e-97 ppiA; peptidyl-prolyl
+ cis-trans isomerase A (rotamase A) K03767;
+ COG: COG0652 Peptidyl-prolyl cis-trans isomerase
+ (rotamase) - cyclophilin family;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="peptidyl-prolyl cis-trans isomerase A (rotamase
+ A)"
+ /protein_id="YP_001573074.1"
+ /db_xref="GI:161505962"
+ /db_xref="InterPro:IPR002130"
+ /translation="MLKSTLAAVAAAFALSALSPAALAAKGDPHVLLATSAGNIELEL
+ NSQKAPVSVKNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFNEQMQQKKPNPPIKNEAD
+ NGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVAD
+ KISQVPTHDVGPYQNVPTKPVVILSAKVLP"
+ misc_feature 4094537..4095031
+ /locus_tag="SARI_04143"
+ /note="peptidyl-prolyl cis-trans isomerase A (rotamase A);
+ Provisional; Region: PRK10903"
+ /db_xref="CDD:182824"
+ misc_feature 4094555..4095019
+ /locus_tag="SARI_04143"
+ /note="cyclophilin_EcCYP_like: cyclophilin-type A-like
+ peptidylprolyl cis- trans isomerase (PPIase) domain
+ similar to the cytosolic E. coli cyclophilin A and
+ Streptomyces antibioticus SanCyp18. Compared to the
+ archetypal cyclophilin Human cyclophilin A, these...;
+ Region: cyclophilin_EcCYP_like; cd01920"
+ /db_xref="CDD:238901"
+ misc_feature order(4094675..4094677,4094681..4094683,4094690..4094695,
+ 4094699..4094701,4094804..4094821,4094843..4094845,
+ 4094867..4094872,4094897..4094899)
+ /locus_tag="SARI_04143"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:238901"
+ gene 4095038..4095310
+ /locus_tag="SARI_04144"
+ CDS 4095038..4095310
+ /locus_tag="SARI_04144"
+ /inference="similar to AA sequence:INSD:CAD08142.1"
+ /note="'COG: NOG18128 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573075.1"
+ /db_xref="GI:161505963"
+ /translation="MPARARAARIFSLSLRNLKLLLILVGKHRHIQGGQVKKLTDKQK
+ SRFWEQRRNVNFQQSRRLEGIEIPLVTLTADEALARIDELRRHYER"
+ misc_feature 4095146..4095307
+ /locus_tag="SARI_04144"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10204"
+ /db_xref="CDD:182304"
+ gene 4095300..4095902
+ /locus_tag="SARI_04145"
+ CDS 4095300..4095902
+ /locus_tag="SARI_04145"
+ /inference="protein motif:HMMPfam:IPR003812"
+ /inference="similar to AA sequence:REFSEQ:YP_218391.1"
+ /note="'COG: COG2184 Protein involved in cell division;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="cell filamentation protein Fic"
+ /protein_id="YP_001573076.1"
+ /db_xref="GI:161505964"
+ /db_xref="InterPro:IPR003812"
+ /translation="MSDKFGEGRDPYLYPGLNVMRNRLGIHQAQRLAQAAYEMTALRA
+ ATIKLGPMVRGLPHLCAIHRQLYQDIFDWAGQLREVDIYQGDTRFCHFAYIEKEGNAL
+ MQDLEEEGYLVGLAHEKFVERLAHYYCEINVLHPFRLGSGLAQRIFFEQLALHAGYAL
+ SWQGIAVETWKQANQSGAMGDLSALQAIFQKAISEARETE"
+ misc_feature 4095300..4095899
+ /locus_tag="SARI_04145"
+ /note="Protein involved in cell division [Cell division
+ and chromosome partitioning]; Region: Fic; COG2184"
+ /db_xref="CDD:225095"
+ misc_feature 4095300..4095899
+ /locus_tag="SARI_04145"
+ /note="cell filamentation protein Fic; Provisional;
+ Region: PRK10347"
+ /db_xref="CDD:182396"
+ gene 4095934..4096566
+ /locus_tag="SARI_04146"
+ CDS 4095934..4096566
+ /locus_tag="SARI_04146"
+ /inference="protein motif:HMMPfam:IPR000991"
+ /inference="protein motif:HMMTigr:IPR006221"
+ /inference="protein motif:ScanRegExp:IPR001680"
+ /inference="protein motif:ScanRegExp:IPR012998"
+ /inference="similar to AA sequence:REFSEQ:NP_458433.1"
+ /note="aminodeoxychorismate synthase subunit PabA; with
+ PabB catalyzes the formation of 4-amino-4-deoxychorismate
+ from chorismate and glutamine in para-aminobenzoate
+ synthesis; PabA provides the glutamine amidotransferase
+ activity"
+ /codon_start=1
+ /transl_table=11
+ /product="para-aminobenzoate synthase component II"
+ /protein_id="YP_001573077.1"
+ /db_xref="GI:161505965"
+ /db_xref="InterPro:IPR000991"
+ /db_xref="InterPro:IPR001680"
+ /db_xref="InterPro:IPR006221"
+ /db_xref="InterPro:IPR012998"
+ /translation="MILLIDNYDSFTWNLYQYFCELGAEVQVRRNDALTLAHIDALNP
+ QKIVISPGPCTPNDAGISLAVIRHYAGRIPMLGVCLGHQAMAQAFGATVVRAAKVMHG
+ KTSPITHNGQGVFRGLPNPLTVTRYHSLIVDPATLPECFEITAWSETQEIMGIRHREW
+ DLEGVQFHPESILSEQGHALLENFSGVDLWLLLSDFLFIFCDYNFTGIST"
+ misc_feature 4095934..4096485
+ /locus_tag="SARI_04146"
+ /note="para-aminobenzoate synthase component II;
+ Provisional; Region: PRK08857"
+ /db_xref="CDD:181566"
+ misc_feature 4095937..4096485
+ /locus_tag="SARI_04146"
+ /note="Type 1 glutamine amidotransferase (GATase1) domain
+ found in Anthranilate synthase; Region:
+ GATase1_Anthranilate_Synthase; cd01743"
+ /db_xref="CDD:153214"
+ misc_feature order(4096084..4096089,4096093..4096095,4096168..4096173,
+ 4096180..4096182,4096312..4096323)
+ /locus_tag="SARI_04146"
+ /note="glutamine binding [chemical binding]; other site"
+ /db_xref="CDD:153214"
+ misc_feature order(4096168..4096170,4096435..4096437,4096441..4096443)
+ /locus_tag="SARI_04146"
+ /note="catalytic triad [active]"
+ /db_xref="CDD:153214"
+ gene 4096582..4097799
+ /gene="argD"
+ /locus_tag="SARI_04147"
+ CDS 4096582..4097799
+ /gene="argD"
+ /locus_tag="SARI_04147"
+ /inference="protein motif:HMMPanther:IPR004636"
+ /inference="protein motif:HMMPanther:IPR005814"
+ /inference="protein motif:HMMPfam:IPR005814"
+ /inference="protein motif:HMMTigr:IPR004636"
+ /inference="protein motif:ScanRegExp:IPR005814"
+ /inference="similar to AA sequence:SwissProt:P40732"
+ /note="'DapATase; bifunctional enzyme that functions in
+ arginine and lysine biosynthetic pathways; catalyzes the
+ formation of N-acetyl-L-glutamate 5-semialdehyde from
+ 2-oxoglutarate and N(2)-acetyl-L-ornithine or
+ N-succinyl-2-L-amino-6-oxoheptanedioate from
+ 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate'"
+ /codon_start=1
+ /transl_table=11
+ /product="bifunctional
+ N-succinyldiaminopimelate-aminotransferase/acetylornithine
+ transaminase protein"
+ /protein_id="YP_001573078.1"
+ /db_xref="GI:161505966"
+ /db_xref="InterPro:IPR004636"
+ /db_xref="InterPro:IPR005814"
+ /translation="MATEQTAITRATFDEVILPVYAPADFIPVKGKGSRVWDQQGKEY
+ IDFAGGIAVTALGHCHPALVEALKSQGETLWHTSNVFTNEPALRLGRKLIDATFAGRV
+ LFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDG
+ FGPKPADIVHVPFNDLHAVKAVMDDHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDE
+ HQALLVFDEVQCGMGRTGSLFAYMHYGVTPDILTSAKALGGGFPVSAMLTTQEIASAF
+ HVGSHGSTYGGNPLACAVAGAAFDIINTPEVLQGIHTKRQQFVQHLQAIDEQFDIFSD
+ IRGMGLLIGAELKPKYKGRARDFLYAGAEAGVMVLNAGTDVMRFAPSLVVEEADINEG
+ MQRFAQAVGNVVA"
+ misc_feature 4096588..4097796
+ /gene="argD"
+ /locus_tag="SARI_04147"
+ /note="bifunctional
+ N-succinyldiaminopimelate-aminotransferase/acetylornithine
+ transaminase protein; Reviewed; Region: argD; PRK05093"
+ /db_xref="CDD:179933"
+ misc_feature 4096642..4097781
+ /gene="argD"
+ /locus_tag="SARI_04147"
+ /note="Acetyl ornithine aminotransferase family. This
+ family belongs to pyridoxal phosphate (PLP)-dependent
+ aspartate aminotransferase superfamily (fold I). The major
+ groups in this CD correspond to ornithine
+ aminotransferase, acetylornithine aminotransferase;
+ Region: OAT_like; cd00610"
+ /db_xref="CDD:99735"
+ misc_feature order(4096900..4096908,4097002..4097007,4097011..4097013,
+ 4097158..4097160,4097257..4097259,4097263..4097268,
+ 4097344..4097346)
+ /gene="argD"
+ /locus_tag="SARI_04147"
+ /note="inhibitor-cofactor binding pocket; inhibition site"
+ /db_xref="CDD:99735"
+ misc_feature order(4096903..4096908,4097002..4097007,4097158..4097160,
+ 4097257..4097259,4097266..4097268,4097344..4097346)
+ /gene="argD"
+ /locus_tag="SARI_04147"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:99735"
+ misc_feature 4097344..4097346
+ /gene="argD"
+ /locus_tag="SARI_04147"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:99735"
+ gene complement(4097842..4099929)
+ /locus_tag="SARI_04148"
+ CDS complement(4097842..4099929)
+ /locus_tag="SARI_04148"
+ /inference="protein motif:HMMPfam:IPR010289"
+ /inference="protein motif:HMMTigr:IPR010020"
+ /note="'KEGG: ssn:SSO_3489 0. yhfK; hypothetical protein
+ K01823;
+ COG: COG1289 Predicted membrane protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573079.1"
+ /db_xref="GI:161505967"
+ /db_xref="InterPro:IPR010020"
+ /db_xref="InterPro:IPR010289"
+ /translation="MWRRLIYHPEINYALRQTLVLCLPVAVGLLIGQLHLGLLFSLVP
+ ACCNIAGLDTPHKRFFKRLVIGASLFAGCSLATQLLLAESVPLPLILTGLTLVLGVTA
+ EISPLHARLLPASLIAAIFTLSLAGYMPVWEPLLIYALGTLWYGVFNWFWFWLWREQP
+ LRESLSLLYRELADYCEAKYSLLTQHIDPEKALPPLLIRQQKAVDLITQCYQQMHMLS
+ AHNNNDYKRLLRAFQEAMDLQEHISVSLHQPEEVQKLVERSHAEEVIRWNAQTVAARL
+ RVLADDILYHRLPTRFSMEKQIGALEKIANQHPENPVGQFCYWHFSRIARVLRTQRPL
+ YARDLMADKQRRLPLLPALKNYLSLKSPALRNAGRISVMMSIASLMGSALNLPKPYWI
+ LMTVLFVTQNGYGATRVRILHRSAGTLVGLVIAGVTLHLHIPESITLAVMLVLTLASY
+ LIIRKNYGWATVGFTVTAVYTIQLLTLNGEQFIVPRLIDTLIGCLIAFGGMVWLWPQW
+ QSGLLRKNAHDALEADQEAIRLILSNDPQATPLAYQRMWVNQAHNTLFNSLNQAMQEP
+ GFNTHYLSDMKLWVTHSQFIVEHINAMTTLAREHTMLTPDLAKRYLESCEIAIQRCQQ
+ RLEYDRPGGSGDVNILESPDMPSHGLLSTLEQHLQRIIGHLNTMHTISSMAWRQRPHH
+ GIWLSKRLRDTKG"
+ misc_feature complement(4097905..4099896)
+ /locus_tag="SARI_04148"
+ /note="integral membrane protein, YccS/YhfK family;
+ Region: YCCS_YHJK; TIGR01667"
+ /db_xref="CDD:130728"
+ misc_feature complement(4098940..4099746)
+ /locus_tag="SARI_04148"
+ /note="FUSC-like inner membrane protein yccS; Region:
+ FUSC-like; pfam12805"
+ /db_xref="CDD:221781"
+ misc_feature complement(4098436..4098804)
+ /locus_tag="SARI_04148"
+ /note="Fusaric acid resistance protein-like; Region:
+ FUSC_2; pfam13515"
+ /db_xref="CDD:222189"
+ gene complement(4099978..4100610)
+ /locus_tag="SARI_04149"
+ CDS complement(4099978..4100610)
+ /locus_tag="SARI_04149"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000595"
+ /inference="protein motif:HMMPfam:IPR001808"
+ /inference="protein motif:HMMSmart:IPR000595"
+ /inference="protein motif:HMMSmart:IPR001808"
+ /inference="protein motif:ScanRegExp:IPR000595"
+ /inference="protein motif:ScanRegExp:IPR001808"
+ /inference="protein motif:superfamily:IPR000595"
+ /inference="similar to AA sequence:INSD:AAT01930.1"
+ /note="complexes with cyclic AMP and binds to specific DNA
+ sites near the promoter to regulate the transcription of
+ several catabolite-sensitive operons"
+ /codon_start=1
+ /transl_table=11
+ /product="cAMP-regulatory protein"
+ /protein_id="YP_001573080.1"
+ /db_xref="GI:161505968"
+ /db_xref="InterPro:IPR000595"
+ /db_xref="InterPro:IPR001808"
+ /db_xref="InterPro:IPR011991"
+ /translation="MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIV
+ KGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKK
+ FRQLIQVNPDILMRLSSQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTH
+ PDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYGTR"
+ misc_feature complement(4099981..4100610)
+ /locus_tag="SARI_04149"
+ /note="DNA-binding transcriptional dual regulator Crp;
+ Provisional; Region: PRK11753"
+ /db_xref="CDD:236969"
+ misc_feature complement(4100260..4100589)
+ /locus_tag="SARI_04149"
+ /note="effector domain of the CAP family of transcription
+ factors; members include CAP (or cAMP receptor protein
+ (CRP)), which binds cAMP, FNR (fumarate and nitrate
+ reduction), which uses an iron-sulfur cluster to sense
+ oxygen) and CooA, a heme containing CO...; Region: CAP_ED;
+ cd00038"
+ /db_xref="CDD:237999"
+ misc_feature complement(order(4100356..4100364,4100392..4100397))
+ /locus_tag="SARI_04149"
+ /note="ligand binding site [chemical binding]; other site"
+ /db_xref="CDD:237999"
+ misc_feature complement(order(4100272..4100280,4100290..4100298))
+ /locus_tag="SARI_04149"
+ /note="flexible hinge region; other site"
+ /db_xref="CDD:237999"
+ misc_feature complement(4099990..4100193)
+ /locus_tag="SARI_04149"
+ /note="helix_turn_helix, cAMP Regulatory protein
+ C-terminus; DNA binding domain of prokaryotic regulatory
+ proteins belonging to the catabolite activator protein
+ family; Region: HTH_CRP; cd00092"
+ /db_xref="CDD:238044"
+ misc_feature complement(4100179..4100184)
+ /locus_tag="SARI_04149"
+ /note="putative switch regulator; other site"
+ /db_xref="CDD:238044"
+ misc_feature complement(order(4100071..4100073,4100098..4100106,
+ 4100110..4100112))
+ /locus_tag="SARI_04149"
+ /note="non-specific DNA interactions [nucleotide binding];
+ other site"
+ /db_xref="CDD:238044"
+ misc_feature complement(4100053..4100073)
+ /locus_tag="SARI_04149"
+ /note="DNA binding site [nucleotide binding]"
+ /db_xref="CDD:238044"
+ misc_feature complement(order(4100053..4100055,4100065..4100070))
+ /locus_tag="SARI_04149"
+ /note="sequence specific DNA binding site [nucleotide
+ binding]; other site"
+ /db_xref="CDD:238044"
+ misc_feature complement(4100065..4100070)
+ /locus_tag="SARI_04149"
+ /note="putative cAMP binding site [chemical binding];
+ other site"
+ /db_xref="CDD:238044"
+ gene 4100918..4101322
+ /locus_tag="SARI_04150"
+ CDS 4100918..4101322
+ /locus_tag="SARI_04150"
+ /inference="protein motif:HMMPfam:IPR003718"
+ /inference="similar to AA sequence:INSD:AAL22327.1"
+ /note="'COG: COG1765 Predicted redox protein, regulator of
+ disulfide bond formation;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573081.1"
+ /db_xref="GI:161505969"
+ /db_xref="InterPro:IPR003718"
+ /translation="MQARVKWVEGLTFLGESSSGHQILMDGNSGDKAPSPMEMVLMAA
+ GGCSAIDVVSILQKGRQNVTNCEVKLTSERREDAPRLFTHINLHFIVTGNDLKEAAVA
+ RAVDLSAEKYCSVALMLEKAVNITHSYEVIAA"
+ misc_feature 4100918..4101319
+ /locus_tag="SARI_04150"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10738"
+ /db_xref="CDD:182688"
+ gene complement(4101417..4102286)
+ /locus_tag="SARI_04151"
+ CDS complement(4101417..4102286)
+ /locus_tag="SARI_04151"
+ /inference="protein motif:FPrintScan:IPR006082"
+ /inference="protein motif:HMMPfam:IPR006083"
+ /inference="protein motif:ScanRegExp:IPR006082"
+ /inference="similar to AA sequence:INSD:AAV79145.1"
+ /note="'KEGG: spt:SPA3330 3.9e-153 prkB;
+ phosphoribulokinase K00855;
+ COG: COG3954 Phosphoribulokinase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573082.1"
+ /db_xref="GI:161505970"
+ /db_xref="InterPro:IPR006082"
+ /db_xref="InterPro:IPR006083"
+ /translation="MSAKHPVIAVTGSSGAGTTTTSLAFRKIFAQLNLHAAEVEGDSF
+ HRYTRPEMDMAIRKARDAGRHISYFGPEANDFGLLEQTLIEYGQTGKGQSRKYLHTYD
+ EAVPWNQVPGTFTPWQALPEPTDVLFYEGLHGGVVTPQHDVARHVDLLVGVVPIVNLE
+ WIQKLIRDTSERGHSREAVMDSVVRSMDDYINYITPQFSRTHINFQRVPTVDTSNPFA
+ AKGIPSLDESFVVIHFRNLEGIDFPWLLAMLQGSFISHINTLVVPGGKMGLAMELIML
+ PLVQRLMEGKKIE"
+ misc_feature complement(4101438..4102268)
+ /locus_tag="SARI_04151"
+ /note="Phosphoribulokinase-like (PRK-like) is a family of
+ proteins similar to phosphoribulokinase (PRK), the enzyme
+ involved in the Benson-Calvin cycle in chloroplasts or
+ photosynthetic prokaryotes. PRK catalyzes the
+ phosphorylation of D-ribulose 5-phosphate to...; Region:
+ PRK_like; cd02029"
+ /db_xref="CDD:238987"
+ misc_feature complement(order(4102227..4102238,4102251..4102253))
+ /locus_tag="SARI_04151"
+ /note="active site"
+ /db_xref="CDD:238987"
+ gene complement(4102338..4102556)
+ /locus_tag="SARI_04152"
+ CDS complement(4102338..4102556)
+ /locus_tag="SARI_04152"
+ /inference="protein motif:HMMPfam:IPR010648"
+ /inference="protein motif:HMMPIR:IPR008227"
+ /inference="similar to AA sequence:SwissProt:P0A2P4"
+ /note="'COG: COG3089 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573083.1"
+ /db_xref="GI:161505971"
+ /db_xref="InterPro:IPR008227"
+ /db_xref="InterPro:IPR010648"
+ /translation="MIVPWQGLSPDTLDNLIESFVLREGTDYGEHERSLEQKVADVKR
+ QLQSGEAVLVWSELHETVNIMPKKQFRD"
+ misc_feature complement(4102344..4102556)
+ /locus_tag="SARI_04152"
+ /note="hypothetical protein; Provisional; Region:
+ PRK04966"
+ /db_xref="CDD:179903"
+ gene complement(4102553..4103575)
+ /locus_tag="SARI_04153"
+ CDS complement(4102553..4103575)
+ /locus_tag="SARI_04153"
+ /inference="protein motif:HMMPfam:IPR000073"
+ /inference="protein motif:HMMPIR:IPR012020"
+ /inference="protein motif:ScanRegExp:IPR000952"
+ /inference="similar to AA sequence:REFSEQ:YP_218383.1"
+ /note="'COG: COG0429 Predicted hydrolase of the
+ alpha/beta-hydrolase fold;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative hydrolase"
+ /protein_id="YP_001573084.1"
+ /db_xref="GI:161505972"
+ /db_xref="InterPro:IPR000073"
+ /db_xref="InterPro:IPR000952"
+ /db_xref="InterPro:IPR012020"
+ /translation="MVEITSTEMTPPVDGSHEFIPMRGIRNRHLQTMLPRLIRRKVKF
+ RAHWQRLELPDGDFVDLAWSEEPQQAKHKPRLVVFHGLEGSLNSPYAHGLIEAAQKRD
+ WLGVVMHFRGCSGEPNRLNRIYHSGETEDGAWFLRWLQREFGAVPTAAVGYSLGGNML
+ ACLLAKGGRDIPIEAAVIVSAPFVLEACSYHMDKGFSRVYQRYLLNLLKANASRKLAA
+ YPGSLPVNLAQLKSMRRIREFDDLITAKIHGFADAIDYYRQCSAMPLLNQIAKPTLII
+ HAKDDPFMDHHVIPKAEDLPPHVEYQLTEHGGHVGFIGGTPLRPEMWLERRIPDWLTT
+ YLEATS"
+ misc_feature complement(4102559..4103530)
+ /locus_tag="SARI_04153"
+ /note="putative hydrolase; Provisional; Region: PRK10985"
+ /db_xref="CDD:182883"
+ gene 4103775..4104131
+ /locus_tag="SARI_04154"
+ CDS 4103775..4104131
+ /locus_tag="SARI_04154"
+ /inference="protein motif:superfamily:IPR011008"
+ /inference="similar to AA sequence:REFSEQ:YP_152454.1"
+ /note="'COG: NOG16906 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573085.1"
+ /db_xref="GI:161505973"
+ /db_xref="InterPro:IPR011008"
+ /translation="MVVLQHDGNVTQGEDMSKTLLQIHFNFSGPFGEEMAQQLVGLAE
+ SINEEPGFIWKIWTESEKNQQAGGIYLFESEETAQAYIKKHSARLKNLGVDEVTFKLF
+ GVNDALTKINHGNLCR"
+ misc_feature 4103826..4104122
+ /locus_tag="SARI_04154"
+ /note="putative monooxygenase; Provisional; Region:
+ PRK11118"
+ /db_xref="CDD:182975"
+ gene complement(4104075..4104266)
+ /locus_tag="SARI_04156"
+ CDS complement(4104075..4104266)
+ /locus_tag="SARI_04156"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573086.1"
+ /db_xref="GI:161505975"
+ /translation="MAITSYSSSTPNDAVLLEQVWGALSGPGNRYRSQAGRNGKPALC
+ DLPAEVAVIYFRQRVVHAK"
+ gene 4104238..4104366
+ /locus_tag="SARI_04155"
+ CDS 4104238..4104366
+ /locus_tag="SARI_04155"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573087.1"
+ /db_xref="GI:161505974"
+ /translation="MLLLYEVIAITNCYFNYYSQANDCFLGLIDDFLTKAQTHFQC"
+ gene 4104403..4106058
+ /locus_tag="SARI_04157"
+ CDS 4104403..4106058
+ /locus_tag="SARI_04157"
+ /inference="protein motif:HMMPanther:IPR004165"
+ /inference="protein motif:HMMTigr:IPR005777"
+ /inference="similar to AA sequence:REFSEQ:YP_001178486.1"
+ /note="'KEGG: reh:H16_A2718 0.00020 pct; propionate
+ CoA-transferase K01026;
+ COG: NOG05983 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573088.1"
+ /db_xref="GI:161505976"
+ /db_xref="InterPro:IPR004165"
+ /db_xref="InterPro:IPR005777"
+ /translation="MLSGQTPARVWNTRRTEKQRRLASVPVQGKVLPTADLTAMLEKL
+ IAPGDRVVLEGNNQKQADFLSRMLAEVNPQKVHDLHMIMPSVGRSEHLDIFEKGIARK
+ LDFSFSGTQSLRISQLLEDGMLEIGAIHTYIELYSRLYVDLAPNVALIAGYKADRKGN
+ LYTGPSTEDTPALVEAAAFHDGIVIAQVNELVDDECDLPRVDIPGSWVDYVVVADKPF
+ FIEPLFTRDPRLIKQEHILMAMMAIKGIYAEHQVQSLNHGIGFNTAAIELLLPTWGEQ
+ LGLRGKICKHWTLNPHPTLIPAIESGWVESVHCFGGELGMEEYIRARPDIFFTGSDGS
+ MRSNRAFCQLAGQYAVDMFIGSTLQVDGYANSSTVTRGRLSGFGGAPNMGHDPHGRRH
+ ATPAWLNMITEPDPMQRGKKLVVQMVETFQAGVKPTFVEKLDAVDVAKASGMPLAPVM
+ IYGDDVTHVLTEEGIAYLYRAESLEERRAMVAAVAGITDIGLGVDAKRVAELRSSGKV
+ VYPEDMGVRRTDATRSLLAAGSVADLVEWSGGLYNPPAKFRSW"
+ misc_feature 4104433..4106055
+ /locus_tag="SARI_04157"
+ /note="malonate decarboxylase, alpha subunit; Region:
+ mdcA; TIGR01110"
+ /db_xref="CDD:233274"
+ misc_feature <4104829..4105056
+ /locus_tag="SARI_04157"
+ /note="Coenzyme A transferase; Region: CoA_trans; cl17247"
+ /db_xref="CDD:247801"
+ gene 4106058..4106915
+ /locus_tag="SARI_04158"
+ CDS 4106058..4106915
+ /locus_tag="SARI_04158"
+ /inference="protein motif:HMMPfam:IPR002736"
+ /inference="similar to AA sequence:REFSEQ:YP_001178485.1"
+ /note="'KEGG: pfl:PFL_5819 2.2e-72 citG;
+ triphosphoribosyl-dephosphocoenzyme-A synthase;
+ COG: COG1767 Triphosphoribosyl-dephospho-CoA synthetase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573089.1"
+ /db_xref="GI:161505977"
+ /db_xref="InterPro:IPR002736"
+ /translation="MKLLPRIQAEGGAEWLARTATQCLIDEARLSPKPGLVDSRGNGA
+ HHDLTLALMERSAHSLTPTFQALALQSWQRPADIALRQTVGRLGREGEQQMMAATGGV
+ NTHRGAIWALGLLVSAVAMHGGVGSAQQVANTAGELAKLPDDAAPKVFSKGLCATHRY
+ RVPGAREEAQQAFPHVMQRALPQLRLSRLNGSSEAQARLDALMAIMTSLTDTCVLSRA
+ GLKGLDAMQDGARAVLNAGGTAHPAGQLALAALDRQMLALNASPGGAADLLAATLFLD
+ RIESPYFKH"
+ misc_feature 4106094..4106849
+ /locus_tag="SARI_04158"
+ /note="triphosphoribosyl-dephospho-CoA synthase;
+ Validated; Region: PRK01237"
+ /db_xref="CDD:234927"
+ gene 4106925..4107223
+ /locus_tag="SARI_04159"
+ /pseudogene="unknown"
+ gene 4107216..4108049
+ /locus_tag="SARI_04160"
+ CDS 4107216..4108049
+ /locus_tag="SARI_04160"
+ /inference="similar to AA sequence:INSD:ABP62432.1"
+ /note="The beta subunit catalyzes the decarboxylation of
+ the malonyl moiety on coenzyme A"
+ /codon_start=1
+ /transl_table=11
+ /product="malonate decarboxylase subunit beta"
+ /protein_id="YP_001573091.1"
+ /db_xref="GI:161505979"
+ /translation="MRDDRSFIELKARQRAQALLDDGSYRELLDPFEGIMSPWLGAQG
+ IVPQADDGMVVAKGTINGKPAVVVAIEGAFQGGSMGEVSGAKMAAALELAAEDNRNGI
+ PTQAVLSLETGGVRLQEANLGLAAIADIHAAIVDLRRYTPVVGIVAGTVGCFGGMSIA
+ AALCSYLIVTREARLGLNGPQVIEQEAGIEEYDSRDRPFIWSMTGGEVRYQSGLVDAL
+ VGDGVNAVKAAMNEALAKGVPAKHRTDNYDWYLDRLTNFDTRKQADSEQIKALFSREV
+ K"
+ misc_feature 4107216..4108046
+ /locus_tag="SARI_04160"
+ /note="malonate decarboxylase subunit beta; Reviewed;
+ Region: PRK07189"
+ /db_xref="CDD:235954"
+ gene 4108046..4108849
+ /locus_tag="SARI_04161"
+ CDS 4108046..4108849
+ /locus_tag="SARI_04161"
+ /inference="protein motif:HMMPfam:IPR009648"
+ /inference="similar to AA sequence:REFSEQ:YP_001178482.1"
+ /note="'KEGG: tko:TK1622 0.0014 methylmalonyl-CoA
+ decarboxylase, alpha subunit K01604;
+ COG: NOG08721 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573092.1"
+ /db_xref="GI:161505980"
+ /db_xref="InterPro:IPR009648"
+ /translation="MMSNSTSRSELWLETLAPNAKRLEGLCPSVQAADGELNGEAVRF
+ IAVVPDANNHYPRAAKGEVGLLEGWTLAKVVSETIAADADNAVKRPIVAVIDVPSQAY
+ GRREEGFGIHQALAGAAAAYANARLAGHPVIGLIVGKAMSGAFLAHGYQANRLIAFND
+ KGVLIHAMGKESAARITLRTVESLEKLAATIPPMAYDISNYATLGLLSDLLDISNPDA
+ PSATDLALVKTTLQQAINDARQDPTLKSRLGADNRRSSAFVRERMRANW"
+ misc_feature 4108076..4108846
+ /locus_tag="SARI_04161"
+ /note="Malonate decarboxylase gamma subunit (MdcE);
+ Region: MdcE; pfam06833"
+ /db_xref="CDD:219196"
+ gene 4108970..4109929
+ /locus_tag="SARI_04162"
+ CDS 4108970..4109929
+ /locus_tag="SARI_04162"
+ /inference="protein motif:HMMPfam:IPR004776"
+ /inference="protein motif:HMMTigr:IPR004776"
+ /inference="similar to AA sequence:INSD:ABP62430.1"
+ /note="'KEGG: azo:azo2534 1.8e-18 mdcF2; putative malonate
+ transporter;
+ COG: COG0679 Predicted permeases;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573093.1"
+ /db_xref="GI:161505981"
+ /db_xref="InterPro:IPR004776"
+ /translation="MTYVIVHALAPIFIIMLLGFWAGKAKMVDNKNVSLLNIFVMDFA
+ LPATLFSATVQTPWTGILAQSPLILVLTLAMWITYVAIYFLATTVFKKSPQDAAVLTL
+ TVALPNYAALGLPILGSVLGEGATTSLSVAVSIACGSVLMTPFCLLILEREKARAEGN
+ NTGSTLAILPVLMWRSLKKPIVMGPLLGVILSAIGIKMPELFLAAIKPLGLSATAAAL
+ FLTGVILSARKLKINTMVITSTITKLLIQPAIAWGIVLIFGLHGSVAITAILMIALSA
+ GFFGVVFGNRFGVQSPDAEAVLLLSSVLCILSLPLFISLTSGI"
+ misc_feature 4108970..4109860
+ /locus_tag="SARI_04162"
+ /note="he Auxin Efflux Carrier (AEC) Family; Region: 2a69;
+ TIGR00946"
+ /db_xref="CDD:233203"
+ gene 4109933..4110550
+ /locus_tag="SARI_04163"
+ CDS 4109933..4110550
+ /locus_tag="SARI_04163"
+ /inference="similar to AA sequence:REFSEQ:YP_001178480.1"
+ /note="Catalyzes the transfer of
+ 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A to the
+ apo-acyl carrier protein of malonate dehydrogenase to form
+ holo-acyl carrier protein"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphoribosyl-dephospho-CoA transferase"
+ /protein_id="YP_001573094.1"
+ /db_xref="GI:161505982"
+ /translation="MNTTLRPHDLIWLNARDALDGIIESWVDDVWHSGLPVVVRRDVD
+ AQGRVPVGVRGMKRDQRAAGWAKPDAITRVCTPESLVDAQTLLCSPFLSQPPLQVALL
+ LAQQTWPWTWGITGSTGYALVTGIPVIHAASDLDLLIRAPQPLAREQLETWHQQLAGG
+ LCRADTQVETPYGAFALNEWLRDGKALLKTSQGPRLVSDPWGREE"
+ misc_feature 4109933..4110547
+ /locus_tag="SARI_04163"
+ /note="phosphoribosyl-dephospho-CoA transferase;
+ Provisional; Region: PRK01293"
+ /db_xref="CDD:234936"
+ misc_feature 4109933..4110532
+ /locus_tag="SARI_04163"
+ /note="Phosphoribosyl-dephospho-CoA transferase MdcG;
+ Region: MdcG; pfam10620"
+ /db_xref="CDD:220826"
+ gene 4110551..4111447
+ /locus_tag="SARI_04164"
+ CDS 4110551..4111447
+ /locus_tag="SARI_04164"
+ /inference="protein motif:Gene3D:IPR001227"
+ /inference="protein motif:HMMPfam:IPR001227"
+ /inference="similar to AA sequence:INSD:ABP62428.1"
+ /note="'KEGG: pfo:Pfl_5296 5.1e-73 acyl transferase region
+ K00645;
+ COG: COG0331 (acyl-carrier-protein) S-malonyltransferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573095.1"
+ /db_xref="GI:161505983"
+ /db_xref="InterPro:IPR001227"
+ /translation="MKILFTFPGQGTQHTGMLQNLPGTELAQAREVLGAEADTLDSPD
+ ALKHTRAVQLALLIAGVAWARELARRGVSPDIVSGLSIGAYPAAVVAGALDFADALRL
+ VALRGDLMEQAYPHGYGLTAIMGLTLAQVESLVEGSGTWIANLNAETQMVIAGTDEAM
+ ASVAKRALEKGASKAHRLAVSVPSHCELLAEPAQKLVAAFSDVTLSRPCCAYLSGSTG
+ RVLWQPEQIADDLAMNMARTVRWQEAVISANEREARLAIEMPPGGVLTCLTRQAAWEG
+ ESISLERSGVDVAVHLAKRLRS"
+ misc_feature 4110551..4111363
+ /locus_tag="SARI_04164"
+ /note="malonyl CoA-acyl carrier protein transacylase;
+ Region: fabD; TIGR00128"
+ /db_xref="CDD:232839"
+ misc_feature 4110557..4111399
+ /locus_tag="SARI_04164"
+ /note="malonate decarboxylase, epsilon subunit; Region:
+ malonate_mdcH; TIGR03131"
+ /db_xref="CDD:132175"
+ gene complement(4111527..4112459)
+ /locus_tag="SARI_04165"
+ CDS complement(4111527..4112459)
+ /locus_tag="SARI_04165"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="protein motif:HMMPfam:IPR005119"
+ /inference="similar to AA sequence:REFSEQ:YP_001178478.1"
+ /note="'KEGG: shn:Shewana3_3435 1.4e-06 transcriptional
+ regulator, LysR family K06022;
+ COG: COG0583 Transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573096.1"
+ /db_xref="GI:161505984"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR005119"
+ /db_xref="InterPro:IPR011991"
+ /translation="MSVSVTDDITFRKLTIFMTFMEKGNIARTAEVLDISGVSVHRAL
+ HTLEENVRCPLFVHKGRNLIAQPAAWTLLEYCQEVMHVMARGLEETRKTAGVGQGRLR
+ VGTLYSLTLETVPHLIMGMKLRRPDLELDLTMGSNEVLLKMLEDGTLDAILISISESD
+ IDRNSLEVLPLFHDDIYLAAPATATIDTSSPADLRDYRDQKFVSLAEGFATYAGFQEA
+ FHVAGFEPEIVTRVNDIFSMLSLVQAGVGFTLMPGRMKKMYENTVQLLKLSESYQMQQ
+ LIAIVFARNRERDPSLLALAAEGRMYARSLQTVG"
+ misc_feature complement(4111572..4112435)
+ /locus_tag="SARI_04165"
+ /note="Transcriptional regulator [Transcription]; Region:
+ LysR; COG0583"
+ /db_xref="CDD:223656"
+ misc_feature complement(4112271..4112429)
+ /locus_tag="SARI_04165"
+ /note="Bacterial regulatory helix-turn-helix protein, lysR
+ family; Region: HTH_1; pfam00126"
+ /db_xref="CDD:215735"
+ misc_feature complement(4111563..4112162)
+ /locus_tag="SARI_04165"
+ /note="The C-terminal substrate-binding domian of
+ LysR-type transcriptional regulator MdcR, which involved
+ in the malonate catabolism contains the type 2 periplasmic
+ binding fold; Region: PBP2_MdcR; cd08416"
+ /db_xref="CDD:176108"
+ misc_feature complement(order(4111728..4111733,4111737..4111742,
+ 4111758..4111775,4112058..4112078,4112082..4112084,
+ 4112094..4112096,4112103..4112108,4112112..4112117))
+ /locus_tag="SARI_04165"
+ /note="putative dimerization interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:176108"
+ gene complement(4112477..4114381)
+ /locus_tag="SARI_04166"
+ CDS complement(4112477..4114381)
+ /locus_tag="SARI_04166"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /note="'KEGG: pen:PSEEN0163 3.1e-185 ABC transporter,
+ ATP-binding protein;
+ COG: COG0488 ATPase components of ABC transporters with
+ duplicated ATPase domains;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative ABC transporter ATP-binding protein"
+ /protein_id="YP_001573097.1"
+ /db_xref="GI:161505985"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MIVFSSLQIRRGVRVLLDNASATINPGQKVGLVGKNGCGKSTLL
+ ALLKNEISADAGSFALPGTWQLAWVNQETPALPQPAIEYVIDGDREYRYLEAQLNDAN
+ ERNDGHAIAAIHGKLDTIDAWTVRSRAASLLHGLGFSNDQLERPVSDFSGGWRMRLNL
+ AQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKNYPGTLILISHDRDFLDPIVDKIIH
+ IEQQTLYEYTGNYSAFEVQRATRLAQQQAMYESQQERVAHLQSYIDRFRAKATKAKQA
+ QSRIKMLERMELIAPAHVDNPFHFSFRAPESLPNPLLKMEKVSAGYGERIILESIKLN
+ LVPGSRIGLLGRNGAGKSTLIKLLAGELEPLHGEIGLAKGIKLGYFAQHQLEYLRADE
+ SPLQHMARLAPQELEQKLRDYLGGFGFQGDKVTEETQRFSGGEKARLVLALIVWQRPN
+ LLLLDEPTNHLDLDMRQALTEALIDFDGALVVVSHDRHLIRSTTDDLYLVHDKKVEPF
+ DGDLEDYQQWLSDVQKQENQSDEPVKENANSAQSRKDQKRREAELRTLTQPLRKEIAR
+ LEKEMEKLNAQLAQAEEKLGDSSLYDPSRKAEMTECLQLQASAKSGLEECEMAWLEAQ
+ EQLEQMMQND"
+ misc_feature complement(4112534..4114381)
+ /locus_tag="SARI_04166"
+ /note="putative ABC transporter ATP-binding protein;
+ Provisional; Region: PRK10636"
+ /db_xref="CDD:236729"
+ misc_feature complement(<4113839..4114378)
+ /locus_tag="SARI_04166"
+ /note="ATP-binding cassette transporter nucleotide-binding
+ domain; Region: ABC_ATPase; cl17201"
+ /db_xref="CDD:247755"
+ misc_feature complement(4114259..4114282)
+ /locus_tag="SARI_04166"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(order(4113857..4113862,4114256..4114264,
+ 4114268..4114273))
+ /locus_tag="SARI_04166"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(4113713..>4113934)
+ /locus_tag="SARI_04166"
+ /note="ATP-binding cassette domain of elongation factor 3,
+ subfamily F; Region: ABCF_EF-3; cd03221"
+ /db_xref="CDD:213188"
+ misc_feature complement(4113905..4113934)
+ /locus_tag="SARI_04166"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(4113857..4113874)
+ /locus_tag="SARI_04166"
+ /note="Walker B; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(4113839..4113850)
+ /locus_tag="SARI_04166"
+ /note="D-loop; other site"
+ /db_xref="CDD:213179"
+ misc_feature complement(4113476..4113733)
+ /locus_tag="SARI_04166"
+ /note="ABC transporter; Region: ABC_tran_2; pfam12848"
+ /db_xref="CDD:221805"
+ misc_feature complement(4112870..4113445)
+ /locus_tag="SARI_04166"
+ /note="ATP-binding cassette domain of elongation factor 3,
+ subfamily F; Region: ABCF_EF-3; cd03221"
+ /db_xref="CDD:213188"
+ misc_feature complement(<4112627..4112704)
+ /locus_tag="SARI_04166"
+ /note="Valyl tRNA synthetase tRNA binding arm; Region:
+ Val_tRNA-synt_C; pfam10458"
+ /db_xref="CDD:151031"
+ gene 4114461..4115066
+ /locus_tag="SARI_04167"
+ CDS 4114461..4115066
+ /locus_tag="SARI_04167"
+ /inference="protein motif:HMMPfam:IPR003680"
+ /inference="similar to AA sequence:INSD:CAD08155.1"
+ /note="required for KefB activity"
+ /codon_start=1
+ /transl_table=11
+ /product="glutathione-regulated potassium-efflux system
+ ancillary protein KefG"
+ /protein_id="YP_001573098.1"
+ /db_xref="GI:161505986"
+ /db_xref="InterPro:IPR003680"
+ /translation="MVAQNNDYTQSTKPGGGLMSQPAKVLLLYAHPESQDSVANRVLL
+ KPAIQHSNVTVHDLYARYPDFFIDTPYEQALLREHDVIVFQHPLYIYSCPALLKEWLD
+ RVLSRGFASGPEGNQLVGKYWRSVITTGEPESAYRYDALNRYPMSDILRPFELTAAMC
+ RMHWMTPIIVYWARRQSPQALASHAKAYGEWLANPVSAGGY"
+ misc_feature 4114515..4115063
+ /locus_tag="SARI_04167"
+ /note="glutathione-regulated potassium-efflux system
+ ancillary protein KefG; Provisional; Region: PRK04930"
+ /db_xref="CDD:179895"
+ gene 4115066..4116871
+ /locus_tag="SARI_04168"
+ CDS 4115066..4116871
+ /locus_tag="SARI_04168"
+ /inference="protein motif:FPrintScan:IPR006036"
+ /inference="protein motif:HMMPfam:IPR003148"
+ /inference="protein motif:HMMPfam:IPR006153"
+ /inference="protein motif:HMMTigr:IPR004771"
+ /note="involved in potassium efflux"
+ /codon_start=1
+ /transl_table=11
+ /product="glutathione-regulated potassium-efflux system
+ protein KefB"
+ /protein_id="YP_001573099.1"
+ /db_xref="GI:161505987"
+ /db_xref="InterPro:IPR003148"
+ /db_xref="InterPro:IPR004771"
+ /db_xref="InterPro:IPR006036"
+ /db_xref="InterPro:IPR006153"
+ /translation="MEGADLLMAGTLFLFAAVVAVPLAARLGIGAVLGYLLAGIAIGP
+ WGLGFISDVDEILHFSELGVVFLMFIIGLELNPSRLWQLRRSIFGVGAAQVLLSAAVL
+ AGLLMLADFLWQAAIVGGIGLAMSSTAMALQLMREKGMNRSESGQLGFSVLLFQDLAV
+ IPALALVPLLAGSADEHFDWFKVGMKVLAFAVMLIGGRYLLRPVFRFIAASGVREVFT
+ AATLLLVLGAALFMDALGLSMALGTFIAGVLLAESEYRHELENAIDPFKGLLLGLFFI
+ SVGMSLNLGVLYTHLLWVAASVVILVVIKMLALYLLARLYGIRSSERMQFASVLSQGG
+ EFAFVLFSTASSQRLFQGDQMALLLVAVTLSMMTTPLLMKGIDKWLSRRLNGPEEHDE
+ KPWVEDDKPQVIVVGFGRFGQVIARLLMANKVRITVLERDIGAVNLMRKYGYKVYYGD
+ ATQVELLRSAGAEAAESIVITCNEPEDTMKLVELCQQHFPHLHILARARGRVEAHELL
+ QAGVTQFSRETFSSALELGRKTLVSLGMHPHQAQRAQLHFRRLDMRMLRELIPEHTDT
+ GQISRAREARRELEEIFQREMQQERRQLDGWDEFE"
+ misc_feature 4115066..4116865
+ /locus_tag="SARI_04168"
+ /note="glutathione-regulated potassium-efflux system
+ protein KefB; Provisional; Region: PRK03659"
+ /db_xref="CDD:179625"
+ misc_feature 4115141..4116244
+ /locus_tag="SARI_04168"
+ /note="Kef-type K+ transport systems, membrane components
+ [Inorganic ion transport and metabolism]; Region: KefB;
+ COG0475"
+ /db_xref="CDD:223551"
+ misc_feature 4116272..4116607
+ /locus_tag="SARI_04168"
+ /note="TrkA-N domain; Region: TrkA_N; pfam02254"
+ /db_xref="CDD:216949"
+ gene 4116881..4117081
+ /locus_tag="SARI_04169"
+ CDS 4116881..4117081
+ /locus_tag="SARI_04169"
+ /inference="protein motif:HMMTigr:IPR012658"
+ /inference="similar to AA sequence:INSD:AAL22319.1"
+ /note="'KEGG: sto:ST1472 0.0027 DNA-directed RNA
+ polymerase subunit M K03057;
+ COG: COG3529 Predicted nucleic-acid-binding protein
+ containing a Zn-ribbon domain;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573100.1"
+ /db_xref="GI:161505988"
+ /db_xref="InterPro:IPR012658"
+ /translation="MAIRKRFIAGAKCPACQAQDTMAMWRENNVDIVECVKCGHQMRE
+ ADKDVREHVRKEEQVIGIFHPD"
+ misc_feature 4116881..4117078
+ /locus_tag="SARI_04169"
+ /note="Predicted nucleic-acid-binding protein containing a
+ Zn-ribbon domain [General function prediction only];
+ Region: COG3529"
+ /db_xref="CDD:226060"
+ gene complement(4117164..4117817)
+ /locus_tag="SARI_04171"
+ CDS complement(4117164..4117817)
+ /locus_tag="SARI_04171"
+ /inference="similar to AA sequence:INSD:AAA18572.1"
+ /note="'Psort location: endoplasmic reticulum, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573101.1"
+ /db_xref="GI:161505990"
+ /translation="MALTLIRPTLERRRVLVAAATTVAFTATAAAAFAAVLVTMVMTV
+ TAAATVFTVIVVMIVRAVNMAVGQFFFSRFTNRNNFYVKFQILTSQHVVTINHNMIVF
+ HFGNFYRYRTLVGFRQETHTYLQFINAHKDVFRHALHQIFIILTVSVVCANSNIKFVA
+ NFMAFQRGFQARNQGAVAVQVIQRRTHRRLINQHTVFCTYLIGQADHQVFCYFHDIS"
+ gene 4117176..4117772
+ /locus_tag="SARI_04170"
+ CDS 4117176..4117772
+ /locus_tag="SARI_04170"
+ /inference="protein motif:HMMPfam:IPR001179"
+ /inference="similar to AA sequence:REFSEQ:NP_462359.1"
+ /note="rotamase"
+ /codon_start=1
+ /transl_table=11
+ /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
+ /protein_id="YP_001573102.1"
+ /db_xref="GI:161505989"
+ /db_xref="InterPro:IPR001179"
+ /translation="MKVAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGSLISG
+ LETALEGHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQ
+ GPVPVEITEVEDDHVVVDGNHMLAGQNLKFNVEVVAIREATEEELAHGHVHGAHDHHH
+ DHGEDGCCGGHGHNHGHEHGGEGCCGGGGKGHGGCGCH"
+ misc_feature 4117176..4117619
+ /locus_tag="SARI_04170"
+ /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
+ Provisional; Region: PRK15095"
+ /db_xref="CDD:237908"
+ misc_feature 4117179..4117397
+ /locus_tag="SARI_04170"
+ /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
+ Region: FKBP_C; pfam00254"
+ /db_xref="CDD:215821"
+ gene complement(4117857..4118075)
+ /locus_tag="SARI_04172"
+ CDS complement(4117857..4118075)
+ /locus_tag="SARI_04172"
+ /inference="protein motif:HMMPfam:IPR007236"
+ /inference="similar to AA sequence:SwissProt:Q8ZLL5"
+ /note="'COG: COG2900 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573103.1"
+ /db_xref="GI:161505991"
+ /db_xref="InterPro:IPR007236"
+ /translation="MQDITMEARLAELESRLAFQEITIEELNLTVTAHEMEMAKLRDH
+ LRLLTEKLKASQPSNIASQAEETPPPHY"
+ misc_feature complement(4117860..4118075)
+ /locus_tag="SARI_04172"
+ /note="phi X174 lysis protein; Provisional; Region:
+ PRK02793"
+ /db_xref="CDD:179472"
+ gene 4118262..4119113
+ /locus_tag="SARI_04173"
+ CDS 4118262..4119113
+ /locus_tag="SARI_04173"
+ /inference="protein motif:BlastProDom:IPR000774"
+ /inference="protein motif:HMMPfam:IPR000774"
+ /inference="protein motif:HMMPfam:IPR001179"
+ /inference="similar to AA sequence:REFSEQ:YP_218374.1"
+ /note="rotamase"
+ /codon_start=1
+ /transl_table=11
+ /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
+ /protein_id="YP_001573104.1"
+ /db_xref="GI:161505992"
+ /db_xref="InterPro:IPR000774"
+ /db_xref="InterPro:IPR001179"
+ /translation="MGRDAPALEIWMKSLFKATLLATTMAVAMHAPITFAADAAKPAA
+ TADSKAAFKNDDQKAAYALGASLGRYMENSLKEQEKLGIKLDKDQLIAGVQDAFADKS
+ KLSDQEIEQTLQTFEARVKTAAQAKMEKDAADNEAKGKAFRDAFAKEKGVKTSKTGLL
+ YKVEKEGTGEAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLDGVIPGWTEGLK
+ NIKKGGKIKLVIPPALAYGKTGVPGIPANSTLVFDVELLDIKPAPKADAKPADAADAK
+ AADAAKK"
+ misc_feature 4118295..4119038
+ /locus_tag="SARI_04173"
+ /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
+ Provisional; Region: PRK10902"
+ /db_xref="CDD:236791"
+ misc_feature 4118418..4118750
+ /locus_tag="SARI_04173"
+ /note="Domain amino terminal to FKBP-type peptidyl-prolyl
+ isomerase; Region: FKBP_N; pfam01346"
+ /db_xref="CDD:216447"
+ misc_feature 4118769..4119032
+ /locus_tag="SARI_04173"
+ /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
+ Region: FKBP_C; pfam00254"
+ /db_xref="CDD:215821"
+ gene 4119390..4120112
+ /locus_tag="SARI_04174"
+ CDS 4119390..4120112
+ /locus_tag="SARI_04174"
+ /inference="protein motif:HMMPfam:IPR013559"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:REFSEQ:NP_458448.1"
+ /note="'COG: COG2964 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573105.1"
+ /db_xref="GI:161505993"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR013559"
+ /translation="MSRSLLTNETSELDLLDQRPFDQTDFDILKSYEAVVDGLAMLIG
+ SHCEIVLHSLQDLKCSAIRIANGEHTGRKIGSPITDLALRMLHDMTGADSSVSKCYFT
+ RAKSGVLMKSLTIAIRNREHRVIGLLCINMNLDVPFSQIMNTFIPPETPEVGSAVNFA
+ SSVEDLVTQTLEFTIEEVNADRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNI
+ SKHTVYLYIRQFKSGDLQGQDK"
+ misc_feature 4119444..4120091
+ /locus_tag="SARI_04174"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG2964"
+ /db_xref="CDD:225512"
+ misc_feature 4119471..4119803
+ /locus_tag="SARI_04174"
+ /note="YheO-like PAS domain; Region: PAS_6; pfam08348"
+ /db_xref="CDD:116929"
+ misc_feature 4119882..4120073
+ /locus_tag="SARI_04174"
+ /note="HTH domain; Region: HTH_22; pfam13309"
+ /db_xref="CDD:205489"
+ gene 4120112..4120498
+ /locus_tag="SARI_04175"
+ CDS 4120112..4120498
+ /locus_tag="SARI_04175"
+ /inference="protein motif:HMMPfam:IPR003787"
+ /inference="similar to AA sequence:INSD:AAV79133.1"
+ /note="in Escherichai coli the heterohexameric TusBCD
+ complex is involved in sulfur related that results in
+ thiouridation to U34 position in some tRNAs"
+ /codon_start=1
+ /transl_table=11
+ /product="sulfur transfer complex subunit TusD"
+ /protein_id="YP_001573106.1"
+ /db_xref="GI:161505994"
+ /db_xref="InterPro:IPR003787"
+ /translation="MRYAIMVTGPAYGAQQASSALQFAHALLNEGHELISVFFYREGV
+ YNANLLTSPAGDEYDLVRAWQKLNTQHGVALNICVAAALRRGIIDDTEADRLGLPSAN
+ LQPGFTLSGLGALAEASLTCDRVVQF"
+ misc_feature 4120112..4120495
+ /locus_tag="SARI_04175"
+ /note="sulfur transfer complex subunit TusD; Validated;
+ Region: PRK00207"
+ /db_xref="CDD:178928"
+ gene 4120498..4120854
+ /locus_tag="SARI_04176"
+ CDS 4120498..4120854
+ /locus_tag="SARI_04176"
+ /inference="protein motif:HMMPfam:IPR003787"
+ /inference="similar to AA sequence:INSD:AAX67290.1"
+ /note="in Escherichai coli the heterohexameric TusBCD
+ complex is involved in sulfur related that results in
+ thiouridation to U34 position in some tRNAs"
+ /codon_start=1
+ /transl_table=11
+ /product="sulfur relay protein TusC"
+ /protein_id="YP_001573107.1"
+ /db_xref="GI:161505995"
+ /db_xref="InterPro:IPR003787"
+ /translation="MKRIAFVFSTAPHGSASGREGLDALLATSALTEALGVFFISDGV
+ FQLLPGQKPDAVLARDYIATFKLFDLYDIDQCWICAASLRERGLKNVNFVVDATPLEP
+ VALRRELGNYDVILRF"
+ misc_feature 4120498..4120851
+ /locus_tag="SARI_04176"
+ /note="sulfur relay protein TusC; Validated; Region:
+ PRK00211"
+ /db_xref="CDD:178930"
+ gene 4120862..4121149
+ /locus_tag="SARI_04177"
+ CDS 4120862..4121149
+ /locus_tag="SARI_04177"
+ /inference="protein motif:HMMPfam:IPR007215"
+ /inference="similar to AA sequence:INSD:AAX67289.1"
+ /note="in Escherichai coli the heterohexameric TusBCD
+ complex is involved in sulfur related that results in
+ thiouridation to U34 position in some tRNAs"
+ /codon_start=1
+ /transl_table=11
+ /product="sulfur transfer complex subunit TusB"
+ /protein_id="YP_001573108.1"
+ /db_xref="GI:161505996"
+ /db_xref="InterPro:IPR007215"
+ /translation="MLHTLPHCASSVDFPALLRLLKEGDALLLLQDGVTVAIEGNRFL
+ ESLRDAPITVYALKEDIDARGLGGQISDSVVRVDYTEFVRLTVKYANQMAW"
+ misc_feature 4120862..4121146
+ /locus_tag="SARI_04177"
+ /note="sulfur transfer complex subunit TusB; Provisional;
+ Region: PRK13510"
+ /db_xref="CDD:184101"
+ gene 4121275..4121649
+ /locus_tag="SARI_04177a"
+ CDS 4121275..4121649
+ /locus_tag="SARI_04177a"
+ /codon_start=1
+ /transl_table=11
+ /product="ribosomal protein S12"
+ /protein_id="YP_004767286.1"
+ /db_xref="GI:341904764"
+ /translation="MATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTTTPKK
+ PNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGAL
+ DCSGVKDRKQARSKYGVKRPKA"
+ misc_feature 4121281..4121604
+ /locus_tag="SARI_04177a"
+ /note="S12-like family, 30S ribosomal protein S12
+ subfamily; S12 is located at the interface of the large
+ and small ribosomal subunits of prokaryotes, chloroplasts
+ and mitochondria, where it plays an important role in both
+ tRNA and ribosomal subunit...; Region: Ribosomal_S12;
+ cd03368"
+ /db_xref="CDD:239466"
+ misc_feature order(4121284..4121289,4121293..4121298,4121305..4121310)
+ /locus_tag="SARI_04177a"
+ /note="S17 interaction site [polypeptide binding]; other
+ site"
+ /db_xref="CDD:239466"
+ misc_feature 4121284..4121286
+ /locus_tag="SARI_04177a"
+ /note="S8 interaction site; other site"
+ /db_xref="CDD:239466"
+ misc_feature order(4121308..4121316,4121350..4121352,4121356..4121361,
+ 4121365..4121367,4121410..4121415,4121419..4121427,
+ 4121446..4121448,4121470..4121472,4121479..4121484,
+ 4121521..4121526,4121536..4121541,4121602..4121604)
+ /locus_tag="SARI_04177a"
+ /note="16S rRNA interaction site [nucleotide binding];
+ other site"
+ /db_xref="CDD:239466"
+ misc_feature order(4121401..4121406,4121536..4121538)
+ /locus_tag="SARI_04177a"
+ /note="streptomycin interaction site [chemical binding];
+ other site"
+ /db_xref="CDD:239466"
+ misc_feature 4121404..4121409
+ /locus_tag="SARI_04177a"
+ /note="23S rRNA interaction site [nucleotide binding];
+ other site"
+ /db_xref="CDD:239466"
+ misc_feature order(4121407..4121424,4121482..4121508)
+ /locus_tag="SARI_04177a"
+ /note="aminoacyl-tRNA interaction site (A-site)
+ [nucleotide binding]; other site"
+ /db_xref="CDD:239466"
+ gene 4121745..4122215
+ /locus_tag="SARI_04179"
+ CDS 4121745..4122215
+ /locus_tag="SARI_04179"
+ /inference="protein motif:BlastProDom:IPR000235"
+ /inference="protein motif:Gene3D:IPR000235"
+ /inference="protein motif:HMMPanther:IPR000235"
+ /inference="protein motif:HMMPfam:IPR000235"
+ /inference="protein motif:HMMPIR:IPR000235"
+ /inference="protein motif:HMMTigr:IPR005717"
+ /inference="protein motif:ScanRegExp:IPR000235"
+ /inference="protein motif:superfamily:IPR000235"
+ /inference="similar to AA sequence:INSD:AAL22310.1"
+ /note="binds directly to 16S rRNA where it nucleates
+ assembly of the head domain of the 30S subunit"
+ /codon_start=1
+ /transl_table=11
+ /product="30S ribosomal protein S7"
+ /protein_id="YP_001573110.1"
+ /db_xref="GI:161505998"
+ /db_xref="InterPro:IPR000235"
+ /db_xref="InterPro:IPR005717"
+ /translation="MPRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAESIVY
+ SALETLAQRSGKSELEAFEVALENVRPTVEVKSRRVGGSTYQVPVEVRPVRRNALAMR
+ WIVEAARKRGDKSMALRLANELSDAADNKGTAVKKREDVHRMAEANKAFAHYRW"
+ misc_feature 4121745..4122212
+ /locus_tag="SARI_04179"
+ /note="30S ribosomal protein S7; Validated; Region:
+ PRK05302"
+ /db_xref="CDD:235398"
+ gene 4122312..4124426
+ /locus_tag="SARI_04180"
+ CDS 4122312..4124426
+ /locus_tag="SARI_04180"
+ /inference="protein motif:FPrintScan:IPR000795"
+ /inference="protein motif:Gene3D:IPR000640"
+ /inference="protein motif:HMMPfam:IPR000640"
+ /inference="protein motif:HMMPfam:IPR000795"
+ /inference="protein motif:HMMPfam:IPR004161"
+ /inference="protein motif:HMMPfam:IPR005517"
+ /inference="protein motif:HMMTigr:IPR004540"
+ /inference="protein motif:HMMTigr:IPR005225"
+ /inference="protein motif:ScanRegExp:IPR000795"
+ /inference="protein motif:superfamily:IPR009000"
+ /inference="protein motif:superfamily:IPR009022"
+ /note="EF-G; promotes GTP-dependent translocation of the
+ ribosome during translation; many organisms have multiple
+ copies of this gene"
+ /codon_start=1
+ /transl_table=11
+ /product="elongation factor G"
+ /protein_id="YP_001573111.1"
+ /db_xref="GI:161505999"
+ /db_xref="InterPro:IPR000640"
+ /db_xref="InterPro:IPR000795"
+ /db_xref="InterPro:IPR004161"
+ /db_xref="InterPro:IPR004540"
+ /db_xref="InterPro:IPR005225"
+ /db_xref="InterPro:IPR005517"
+ /db_xref="InterPro:IPR009000"
+ /db_xref="InterPro:IPR009022"
+ /translation="MARTTPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVH
+ DGAATMDWMEQEQERGITITSAATTAFWSGMAKQYEPHRINIIDTPGHVDFTIEVERS
+ MRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVGQIKT
+ RLGANPVPLQLAIGAEEGFTGVVDLVKMKAINWNDADQGVTFEYEDIPADMQDLADEW
+ HQNLIESAAEASEELMEKYLGGEELTEEEIKQALRQRVLNNEIILVTCGSAFKNKGVQ
+ AMLDAVIDYLPSPVDVPAINGILDDGKDTPAERHASDDEPFSALAFKIATDPFVGNLT
+ FFRVYSGVVNSGDTVLNSVKTARERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVT
+ TGDTLCDPENPIILERMEFPEPVISIAVEPKTKADQEKMGLALGRLAKEDPSFRVWTD
+ EESNQTIIAGMGELHLDIIVDRMKREFNVEANVGKPQVAYREAIRAKVTDIEGKHAKQ
+ SGGRGQYGHVVIDMYPLEPGSNPKGYEFINDIKGGVIPGEYIPAVDKGIQEQLKSGPL
+ AGYPVVDLGVRLHFGSYHDVDSSELAFKLAASIAFKEGFKKAKPVLLEPIMKVEVETP
+ EENTGDVIGDLSRRRGMLKGQESEVTGVKIHAEVPLSEMFGYATQLRSLTKGRASYTM
+ EFLKYDDAPNNVAQAVIEARGK"
+ misc_feature 4122312..4124423
+ /locus_tag="SARI_04180"
+ /note="elongation factor G; Reviewed; Region: PRK00007"
+ /db_xref="CDD:234569"
+ misc_feature 4122345..4123178
+ /locus_tag="SARI_04180"
+ /note="Elongation factor G (EF-G) family involved in both
+ the elongation and ribosome recycling phases of protein
+ synthesis; Region: EF-G; cd01886"
+ /db_xref="CDD:206673"
+ misc_feature 4122360..4122383
+ /locus_tag="SARI_04180"
+ /note="G1 box; other site"
+ /db_xref="CDD:206673"
+ misc_feature order(4122363..4122365,4122369..4122371,4122381..4122386,
+ 4122393..4122395,4122402..4122407,4122507..4122512,
+ 4122585..4122590,4122657..4122662,4122768..4122770,
+ 4122780..4122782)
+ /locus_tag="SARI_04180"
+ /note="putative GEF interaction site [polypeptide
+ binding]; other site"
+ /db_xref="CDD:206673"
+ misc_feature order(4122369..4122371,4122375..4122386,4122735..4122740,
+ 4122744..4122746,4123113..4123121)
+ /locus_tag="SARI_04180"
+ /note="GTP/Mg2+ binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:206673"
+ misc_feature 4122450..4122509
+ /locus_tag="SARI_04180"
+ /note="Switch I region; other site"
+ /db_xref="CDD:206673"
+ misc_feature 4122495..4122497
+ /locus_tag="SARI_04180"
+ /note="G2 box; other site"
+ /db_xref="CDD:206673"
+ misc_feature 4122573..4122584
+ /locus_tag="SARI_04180"
+ /note="G3 box; other site"
+ /db_xref="CDD:206673"
+ misc_feature 4122579..4122635
+ /locus_tag="SARI_04180"
+ /note="Switch II region; other site"
+ /db_xref="CDD:206673"
+ misc_feature 4122735..4122746
+ /locus_tag="SARI_04180"
+ /note="G4 box; other site"
+ /db_xref="CDD:206673"
+ misc_feature 4123113..4123121
+ /locus_tag="SARI_04180"
+ /note="G5 box; other site"
+ /db_xref="CDD:206673"
+ misc_feature 4123260..4123508
+ /locus_tag="SARI_04180"
+ /note="EFG_mtEFG_II: this subfamily represents the domain
+ II of elongation factor G (EF-G) in bacteria and, the
+ C-terminus of mitochondrial Elongation factor G1 (mtEFG1)
+ and G2 (mtEFG2)_like proteins found in eukaryotes. During
+ the process of peptide synthesis...; Region: EFG_mtEFG_II;
+ cd04088"
+ /db_xref="CDD:239755"
+ misc_feature 4123779..4124138
+ /locus_tag="SARI_04180"
+ /note="EFG_mtEFG1_IV: domains similar to domain IV of the
+ bacterial translational elongation factor (EF) EF-G.
+ Included in this group is a domain of mitochondrial
+ Elongation factor G1 (mtEFG1) proteins homologous to
+ domain IV of EF-G. Eukaryotic cells harbor 2...; Region:
+ EFG_mtEFG1_IV; cd01434"
+ /db_xref="CDD:238715"
+ misc_feature 4124151..4124384
+ /locus_tag="SARI_04180"
+ /note="EFG_mtEFG_C: domains similar to the C-terminal
+ domain of the bacterial translational elongation factor
+ (EF) EF-G. Included in this group is the C-terminus of
+ mitochondrial Elongation factor G1 (mtEFG1) and G2
+ (mtEFG2) proteins. Eukaryotic cells harbor 2...; Region:
+ EFG_mtEFG_C; cd03713"
+ /db_xref="CDD:239683"
+ gene complement(4124396..4125592)
+ /locus_tag="SARI_04182"
+ CDS complement(4124396..4125592)
+ /locus_tag="SARI_04182"
+ /inference="similar to AA sequence:REFSEQ:ZP_01055773.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573112.1"
+ /db_xref="GI:161506001"
+ /translation="MDQGNNHFDVVARHYHLHAFRQFDGASHVSSTEVELRTVAFEER
+ SMTAAFIFGQNIHFRFELGVRLDGARLSQYLTTFDFFTFDTTQQNTYVLTGTAFVQQF
+ AEHFNASTGRLLSLFDTNDFNFFAHFDDTAFYTTGNNGTTTGDGEYVFDRQQERLVNR
+ TLWFRDVRVQEASQFDDFRFPLCIAFQRFQSRTTNDRRIVAREVVLRQKFTNFHFNQF
+ QQLFVINHVAFVQEHDDVRNAYLTTQQDVLTGLRHRAVSRSNNQDRAVHLSSTGDHVF
+ NIVGVPRAVYVCVVASRGIVFNVRSVDGDTTRFFFRRVIDLVESTSSTAVGFSQYGGD
+ CSGQGSFTVVNVTDGADVNVRFCTFKFFFRHGYIPYYSALPFRREHGILVFNPAAYLP
+ RASITA"
+ gene 4124453..4125682
+ /locus_tag="SARI_04181"
+ CDS 4124453..4125682
+ /locus_tag="SARI_04181"
+ /inference="protein motif:HMMPanther:IPR004541"
+ /inference="protein motif:HMMPfam:IPR000795"
+ /inference="protein motif:HMMPfam:IPR004160"
+ /inference="protein motif:HMMPfam:IPR004161"
+ /inference="protein motif:HMMTigr:IPR004541"
+ /inference="protein motif:HMMTigr:IPR005225"
+ /inference="protein motif:ScanRegExp:IPR000795"
+ /inference="protein motif:superfamily:IPR009001"
+ /inference="similar to AA sequence:REFSEQ:YP_218366.1"
+ /note="'EF-Tu; promotes GTP-dependent binding of
+ aminoacyl-tRNA to the A-site of ribosomes during protein
+ biosynthesis; when the tRNA anticodon matches the mRNA
+ codon, GTP hydrolysis results; the inactive EF-Tu-GDP
+ leaves the ribosome and release of GDP is promoted by
+ elongation factor Ts; many prokaryotes have two copies of
+ the gene encoding EF-Tu'"
+ /codon_start=1
+ /transl_table=11
+ /product="elongation factor Tu"
+ /protein_id="YP_001573113.1"
+ /db_xref="GI:161506000"
+ /db_xref="InterPro:IPR000795"
+ /db_xref="InterPro:IPR004160"
+ /db_xref="InterPro:IPR004161"
+ /db_xref="InterPro:IPR004541"
+ /db_xref="InterPro:IPR005225"
+ /db_xref="InterPro:IPR009001"
+ /translation="MLSPEGESAIVRNIAVSKEKFERTKPHVNVGTIGHVDHGKTTLT
+ AAITTVLAKTYGGAARAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVDCPGHAD
+ YVKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEE
+ LLELVEMEVRELLSQYDFPGDDTPIVRGSALKALEGDAEWEAKIIELAGFLDSYIPEP
+ ERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEIVGIKETQKSTCTGVEM
+ FRKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGR
+ HTPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAI
+ REGGRTVGAGVVAKVLG"
+ misc_feature 4124501..4125676
+ /locus_tag="SARI_04181"
+ /note="elongation factor Tu; Reviewed; Region: PRK00049"
+ /db_xref="CDD:234596"
+ misc_feature 4124528..4125106
+ /locus_tag="SARI_04181"
+ /note="Elongation Factor Tu (EF-Tu) GTP-binding proteins;
+ Region: EF_Tu; cd01884"
+ /db_xref="CDD:206671"
+ misc_feature 4124552..4124575
+ /locus_tag="SARI_04181"
+ /note="G1 box; other site"
+ /db_xref="CDD:206671"
+ misc_feature order(4124555..4124557,4124561..4124563,4124573..4124578,
+ 4124585..4124587,4124594..4124599,4124609..4124611,
+ 4124693..4124698,4124750..4124755,4124822..4124827,
+ 4124831..4124842,4124849..4124851,4124942..4124944,
+ 4124954..4124956,4125032..4125037)
+ /locus_tag="SARI_04181"
+ /note="GEF interaction site [polypeptide binding]; other
+ site"
+ /db_xref="CDD:206671"
+ misc_feature order(4124561..4124578,4124636..4124638,4124903..4124908,
+ 4124912..4124914,4125017..4125025)
+ /locus_tag="SARI_04181"
+ /note="GTP/Mg2+ binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:206671"
+ misc_feature 4124663..4124695
+ /locus_tag="SARI_04181"
+ /note="Switch I region; other site"
+ /db_xref="CDD:206671"
+ misc_feature 4124681..4124683
+ /locus_tag="SARI_04181"
+ /note="G2 box; other site"
+ /db_xref="CDD:206671"
+ misc_feature 4124738..4124749
+ /locus_tag="SARI_04181"
+ /note="G3 box; other site"
+ /db_xref="CDD:206671"
+ misc_feature 4124744..4124800
+ /locus_tag="SARI_04181"
+ /note="Switch II region; other site"
+ /db_xref="CDD:206671"
+ misc_feature 4124903..4124914
+ /locus_tag="SARI_04181"
+ /note="G4 box; other site"
+ /db_xref="CDD:206671"
+ misc_feature 4125017..4125025
+ /locus_tag="SARI_04181"
+ /note="G5 box; other site"
+ /db_xref="CDD:206671"
+ misc_feature 4125128..4125388
+ /locus_tag="SARI_04181"
+ /note="EFTU_II: Elongation factor Tu domain II. Elongation
+ factors Tu (EF-Tu) are three-domain GTPases with an
+ essential function in the elongation phase of mRNA
+ translation. The GTPase center of EF-Tu is in the
+ N-terminal domain (domain I), also known as the...;
+ Region: EFTU_II; cd03697"
+ /db_xref="CDD:239668"
+ misc_feature 4125395..4125664
+ /locus_tag="SARI_04181"
+ /note="Domain III of elongation factor (EF) Tu. Ef-Tu
+ consists of three structural domains, designated I, II and
+ III. Domain III adopts a beta barrel structure. Domain III
+ is involved in binding to both charged tRNA and binding to
+ elongation factor Ts (EF-Ts); Region: EFTU_III; cd03707"
+ /db_xref="CDD:239678"
+ misc_feature order(4125431..4125433,4125437..4125445,4125497..4125499,
+ 4125617..4125625,4125653..4125655)
+ /locus_tag="SARI_04181"
+ /note="Antibiotic Binding Site [chemical binding]; other
+ site"
+ /db_xref="CDD:239678"
+ gene complement(4125774..4125926)
+ /locus_tag="SARI_04183"
+ CDS complement(4125774..4125926)
+ /locus_tag="SARI_04183"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573114.1"
+ /db_xref="GI:161506002"
+ /translation="MSYSLADFFIAYTVTQTNVHDRPRSISAQSVNENGYDYNSEVQF
+ MPREKR"
+ gene 4126134..4126610
+ /locus_tag="SARI_04184"
+ CDS 4126134..4126610
+ /locus_tag="SARI_04184"
+ /inference="protein motif:BlastProDom:IPR002024"
+ /inference="protein motif:Gene3D:IPR012347"
+ /inference="protein motif:HMMPfam:IPR008331"
+ /inference="protein motif:HMMTigr:IPR002024"
+ /inference="protein motif:ScanRegExp:IPR002024"
+ /inference="protein motif:superfamily:IPR009078"
+ /inference="similar to AA sequence:REFSEQ:NP_462347.1"
+ /note="iron storage protein"
+ /codon_start=1
+ /transl_table=11
+ /product="bacterioferritin"
+ /protein_id="YP_001573115.1"
+ /db_xref="GI:161506003"
+ /db_xref="InterPro:IPR002024"
+ /db_xref="InterPro:IPR008331"
+ /db_xref="InterPro:IPR009078"
+ /db_xref="InterPro:IPR012347"
+ /translation="MKGDVKIINYLNKLLGNELVAINQYFLHARMFKNWGLTRLNDVE
+ YHESIDEMKHADKYIERILFLEGIPNLQDLGKLGIGEDVEEMLRSDLRLELEGAKDLR
+ EAIAYADSVHDYVSRDMMIEILADEEGHIDWLETELDLITKLGMQNYLQSQIKVTD"
+ misc_feature 4126134..4126595
+ /locus_tag="SARI_04184"
+ /note="Bacterioferritin (cytochrome b1) [Inorganic ion
+ transport and metabolism]; Region: Bfr; COG2193"
+ /db_xref="CDD:225104"
+ misc_feature 4126137..4126595
+ /locus_tag="SARI_04184"
+ /note="Bacterioferritin, ferritin-like diiron-binding
+ domain; Region: Bacterioferritin; cd00907"
+ /db_xref="CDD:153099"
+ misc_feature order(4126176..4126178,4126200..4126202,4126221..4126223,
+ 4126266..4126268,4126287..4126289,4126299..4126301)
+ /locus_tag="SARI_04184"
+ /note="heme binding site [chemical binding]; other site"
+ /db_xref="CDD:153099"
+ misc_feature order(4126182..4126187,4126191..4126196,4126206..4126208,
+ 4126284..4126286,4126293..4126295,4126410..4126415,
+ 4126422..4126424,4126434..4126436,4126509..4126514)
+ /locus_tag="SARI_04184"
+ /note="ferroxidase pore; other site"
+ /db_xref="CDD:153099"
+ misc_feature order(4126185..4126187,4126206..4126208,4126284..4126286,
+ 4126293..4126295,4126413..4126415,4126434..4126436,
+ 4126512..4126514,4126521..4126523)
+ /locus_tag="SARI_04184"
+ /note="ferroxidase diiron center [ion binding]; other
+ site"
+ /db_xref="CDD:153099"
+ gene complement(4126607..4127200)
+ /locus_tag="SARI_04185"
+ CDS complement(4126607..4127200)
+ /locus_tag="SARI_04185"
+ /inference="protein motif:HMMPfam:IPR000045"
+ /inference="similar to AA sequence:REFSEQ:YP_218363.1"
+ /note="'KEGG: sec:SC3376 3.7e-102 hopD; leader peptidase
+ HopD K02506;
+ COG: COG1989 Type II secretory pathway, prepilin signal
+ peptidase PulO and related peptidases;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573116.1"
+ /db_xref="GI:161506004"
+ /db_xref="InterPro:IPR000045"
+ /translation="MVRMGWQRASFLWKASGKSGNTPLLLSHKSIKVSTSLDEDLLMF
+ AALPFLIFYASFSLLLGIYDARTGLLPDRFTCPLLWGGLLYHQICLPERLPDALWGAI
+ AGYSGFALIYWSYRLRYQKEGLGYGDVKYLAALGAWHCWESLPLLVFLAAMLACGGFG
+ VALLVRGKSALINPLPFGPWLAVAGFITGWNDFFPDG"
+ misc_feature complement(4126631..>4127080)
+ /locus_tag="SARI_04185"
+ /note="Type II secretory pathway, prepilin signal
+ peptidase PulO and related peptidases [Cell motility and
+ secretion / Posttranslational modification, protein
+ turnover, chaperones / Intracellular trafficking and
+ secretion]; Region: PulO; COG1989"
+ /db_xref="CDD:224900"
+ misc_feature complement(4126736..4127050)
+ /locus_tag="SARI_04185"
+ /note="Type IV leader peptidase family; Region:
+ Peptidase_A24; pfam01478"
+ /db_xref="CDD:216522"
+ gene 4127454..4127765
+ /locus_tag="SARI_04186"
+ CDS 4127454..4127765
+ /locus_tag="SARI_04186"
+ /inference="protein motif:BlastProDom:IPR001848"
+ /inference="protein motif:Gene3D:IPR001848"
+ /inference="protein motif:HMMPanther:IPR001848"
+ /inference="protein motif:HMMPfam:IPR001848"
+ /inference="protein motif:HMMTigr:IPR005731"
+ /inference="protein motif:ScanRegExp:IPR001848"
+ /inference="protein motif:superfamily:IPR001848"
+ /inference="similar to AA sequence:REFSEQ:ZP_00156632.2"
+ /note="'COG: COG0051 Ribosomal protein S10;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573117.1"
+ /db_xref="GI:161506005"
+ /db_xref="InterPro:IPR001848"
+ /db_xref="InterPro:IPR005731"
+ /translation="MQNQRIRIRLKAFDHRLIDQSTAEIVETAKRTGAQVRGPIPLPT
+ RKERFTVLISPHVNKDARDQYEIRTHKRLVDIVEPTEKTVDALMRLDLAAGVDVQISL
+ G"
+ misc_feature 4127454..4127759
+ /locus_tag="SARI_04186"
+ /note="30S ribosomal protein S10; Reviewed; Region: rpsJ;
+ PRK00596"
+ /db_xref="CDD:179076"
+ gene 4127798..4128427
+ /gene="rplC"
+ /locus_tag="SARI_04187"
+ CDS 4127798..4128427
+ /gene="rplC"
+ /locus_tag="SARI_04187"
+ /inference="protein motif:BlastProDom:IPR000597"
+ /inference="protein motif:HMMPfam:IPR000597"
+ /inference="protein motif:ScanRegExp:IPR000597"
+ /inference="protein motif:superfamily:IPR009000"
+ /inference="similar to AA sequence:INSD:AAX67280.1"
+ /note="'binds directly near the 3' end of the 23S rRNA,
+ where it nucleates assembly of the 50S subunit; essential
+ for peptidyltransferase activity; mutations in this gene
+ confer resistance to tiamulin'"
+ /codon_start=1
+ /transl_table=11
+ /product="50S ribosomal protein L3"
+ /protein_id="YP_001573118.1"
+ /db_xref="GI:161506006"
+ /db_xref="InterPro:IPR000597"
+ /db_xref="InterPro:IPR009000"
+ /translation="MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDG
+ YRAVQVTTGVKKANRVTKPEAGHFAKAGVEAGRGLWEFRLAEGEEYTVGQSISVELFA
+ DVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKK
+ MAGQMGNERVTVQSLDVVRVDAERNLLLVKGGVPGATGCDLIVKPAVKA"
+ misc_feature 4127804..4128409
+ /gene="rplC"
+ /locus_tag="SARI_04187"
+ /note="50S ribosomal protein L3, bacterial; Region:
+ L3_bact; TIGR03625"
+ /db_xref="CDD:234285"
+ gene complement(4127807..4128508)
+ /locus_tag="SARI_04189"
+ CDS complement(4127807..4128508)
+ /locus_tag="SARI_04189"
+ /inference="similar to AA sequence:INSD:EAY45747.1"
+ /note="'Psort location: extracellular, including cell
+ wall, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573119.1"
+ /db_xref="GI:161506008"
+ /translation="MKSRPKVVSETVSALCASFNTNSIAIPLRLHSWFNDQVATGRTR
+ NATLNQQQVALSVNAYYVKALNGYALITHLTCHFLAFEHFARSLVLTDRTRNAVRQGV
+ TVSRVLGTEVPALNGTSETFTFRGTGYVNFFNVSKQFNADALTYGVFFAFSQTEFPQT
+ TASFYASFSKVTRFRLGDTVSFFNTRSNLNSAVAIVSQVFNLSNTVCFNFDYGYWDRD
+ AIFCEDAGHTHFFTD"
+ gene 4128438..4129043
+ /gene="rplD"
+ /locus_tag="SARI_04188"
+ CDS 4128438..4129043
+ /gene="rplD"
+ /locus_tag="SARI_04188"
+ /inference="protein motif:HMMPanther:IPR013005"
+ /inference="protein motif:HMMPfam:IPR002136"
+ /inference="protein motif:superfamily:IPR002136"
+ /inference="similar to AA sequence:INSD:"
+ /note="L4 is important during the early stages of 50S
+ assembly; it initially binds near the 5' end of the 23S
+ rRNA"
+ /codon_start=1
+ /transl_table=11
+ /product="50S ribosomal protein L4"
+ /protein_id="YP_001573120.1"
+ /db_xref="GI:161506007"
+ /db_xref="InterPro:IPR002136"
+ /db_xref="InterPro:IPR013005"
+ /translation="MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTR
+ AQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYR
+ GALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLA
+ ARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA"
+ misc_feature 4128438..4129040
+ /gene="rplD"
+ /locus_tag="SARI_04188"
+ /note="50S ribosomal protein L4; Provisional; Region:
+ rplD; PRK05319"
+ /db_xref="CDD:235404"
+ gene 4129040..4129342
+ /gene="rplW"
+ /locus_tag="SARI_04190"
+ CDS 4129040..4129342
+ /gene="rplW"
+ /locus_tag="SARI_04190"
+ /inference="protein motif:BlastProDom:IPR013025"
+ /inference="protein motif:Gene3D:IPR012677"
+ /inference="protein motif:HMMPfam:IPR013025"
+ /inference="protein motif:ScanRegExp:IPR001014"
+ /inference="protein motif:ScanRegExp:IPR010916"
+ /inference="protein motif:superfamily:IPR012678"
+ /inference="similar to AA sequence:INSD:AAX67278.1"
+ /note="binds third domain of 23S rRNA and protein L29;
+ part of exit tunnel"
+ /codon_start=1
+ /transl_table=11
+ /product="50S ribosomal protein L23"
+ /protein_id="YP_001573121.1"
+ /db_xref="GI:161506009"
+ /db_xref="InterPro:IPR001014"
+ /db_xref="InterPro:IPR010916"
+ /db_xref="InterPro:IPR012677"
+ /db_xref="InterPro:IPR012678"
+ /db_xref="InterPro:IPR013025"
+ /translation="MIREERLLKVLRAPHVSEKASTAMEKTNTIVLKVAKDATKAEIK
+ AAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLDFVGGAE"
+ misc_feature 4129061..4129336
+ /gene="rplW"
+ /locus_tag="SARI_04190"
+ /note="50S ribosomal protein L23; Reviewed; Region: rplW;
+ PRK05738"
+ /db_xref="CDD:235586"
+ gene 4129360..4130181
+ /gene="rplB"
+ /locus_tag="SARI_04191"
+ CDS 4129360..4130181
+ /gene="rplB"
+ /locus_tag="SARI_04191"
+ /inference="protein motif:Gene3D:IPR002171"
+ /inference="protein motif:HMMPanther:IPR002171"
+ /inference="protein motif:HMMPfam:IPR002171"
+ /inference="protein motif:HMMTigr:IPR005880"
+ /inference="protein motif:ScanRegExp:IPR002171"
+ /inference="protein motif:superfamily:IPR008991"
+ /inference="protein motif:superfamily:IPR008994"
+ /inference="similar to AA sequence:INSD:AAX67277.1"
+ /note="'one of the primary rRNA-binding proteins; required
+ for association of the 30S and 50S subunits to form the
+ 70S ribosome, for tRNA binding and peptide bond
+ formation'"
+ /codon_start=1
+ /transl_table=11
+ /product="50S ribosomal protein L2"
+ /protein_id="YP_001573123.1"
+ /db_xref="GI:161506010"
+ /db_xref="InterPro:IPR002171"
+ /db_xref="InterPro:IPR005880"
+ /db_xref="InterPro:IPR008991"
+ /db_xref="InterPro:IPR008994"
+ /translation="MAVVKCKPTSPGRRHVVKVVNPELHKGKPFAPLVEKNSKSGGRN
+ NNGRITTRHIGGGHKQAYRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDGERR
+ YILAPKGLKAGDQIQSGVDAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGT
+ YVQIVARDGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARWRGVRP
+ TVRGTAMNPVDHPHGGGEGRNFGKHPVTPWGVQTKGKKTRSNKRTDKFIVRRRSK"
+ misc_feature 4129360..4130178
+ /gene="rplB"
+ /locus_tag="SARI_04191"
+ /note="50S ribosomal protein L2; Validated; Region: rplB;
+ PRK09374"
+ /db_xref="CDD:236488"
+ misc_feature 4129504..4129713
+ /gene="rplB"
+ /locus_tag="SARI_04191"
+ /note="Ribosomal Proteins L2, RNA binding domain; Region:
+ Ribosomal_L2; pfam00181"
+ /db_xref="CDD:109247"
+ misc_feature 4129729..4130106
+ /gene="rplB"
+ /locus_tag="SARI_04191"
+ /note="Ribosomal Proteins L2, C-terminal domain; Region:
+ Ribosomal_L2_C; pfam03947"
+ /db_xref="CDD:202823"
+ gene 4130198..4130476
+ /gene="rpsS"
+ /locus_tag="SARI_04192"
+ CDS 4130198..4130476
+ /gene="rpsS"
+ /locus_tag="SARI_04192"
+ /inference="protein motif:BlastProDom:IPR002222"
+ /inference="protein motif:Gene3D:IPR002222"
+ /inference="protein motif:HMMPanther:IPR002222"
+ /inference="protein motif:HMMPfam:IPR002222"
+ /inference="protein motif:HMMTigr:IPR005732"
+ /inference="protein motif:ScanRegExp:IPR002222"
+ /inference="protein motif:superfamily:IPR002222"
+ /inference="similar to AA sequence:INSD:ABP62404.1"
+ /note="protein S19 forms a complex with S13 that binds
+ strongly to the 16S ribosomal RNA"
+ /codon_start=1
+ /transl_table=11
+ /product="30S ribosomal protein S19"
+ /protein_id="YP_001573124.1"
+ /db_xref="GI:161506011"
+ /db_xref="InterPro:IPR002222"
+ /db_xref="InterPro:IPR005732"
+ /translation="MPRSLKKGPFIDLHLLKKVEKAVESGDKKPLRTWSRRSTIFPNM
+ IGLTIAVHNGRQHVPVFVSDEMVGHKLGEFAPTRTYRGHAADKKAKKK"
+ misc_feature 4130198..4130473
+ /gene="rpsS"
+ /locus_tag="SARI_04192"
+ /note="30S ribosomal protein S19; Reviewed; Region: rpsS;
+ PRK00357"
+ /db_xref="CDD:178985"
+ gene 4130491..4130823
+ /gene="rplV"
+ /locus_tag="SARI_04194"
+ CDS 4130491..4130823
+ /gene="rplV"
+ /locus_tag="SARI_04194"
+ /inference="protein motif:BlastProDom:IPR001063"
+ /inference="protein motif:Gene3D:IPR001063"
+ /inference="protein motif:HMMPfam:IPR001063"
+ /inference="protein motif:HMMTigr:IPR005727"
+ /inference="protein motif:ScanRegExp:IPR001063"
+ /inference="protein motif:superfamily:IPR001063"
+ /inference="similar to AA sequence:INSD:BAE77976.1"
+ /note="binds specifically to 23S rRNA during the early
+ stages of 50S assembly; makes contact with all 6 domains
+ of the 23S rRNA in the assembled 50S subunit and ribosome;
+ mutations in this gene result in erythromycin resistance;
+ located near peptidyl-transferase center"
+ /codon_start=1
+ /transl_table=11
+ /product="50S ribosomal protein L22"
+ /protein_id="YP_001573125.1"
+ /db_xref="GI:161506013"
+ /db_xref="InterPro:IPR001063"
+ /db_xref="InterPro:IPR005727"
+ /translation="METLAQHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAA
+ VLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSH
+ ITVVVSDR"
+ misc_feature 4130503..4130811
+ /gene="rplV"
+ /locus_tag="SARI_04194"
+ /note="Ribosomal protein L22/L17e. L22 (L17 in
+ eukaryotes) is a core protein of the large ribosomal
+ subunit. It is the only ribosomal protein that interacts
+ with all six domains of 23S rRNA, and is one of the
+ proteins important for directing the proper...; Region:
+ Ribosomal_L22; cd00336"
+ /db_xref="CDD:238205"
+ misc_feature order(4130506..4130508,4130512..4130514,4130521..4130523,
+ 4130527..4130535,4130542..4130544,4130554..4130556,
+ 4130563..4130565,4130647..4130649,4130659..4130661,
+ 4130668..4130670,4130707..4130709,4130713..4130721,
+ 4130725..4130727,4130734..4130736,4130770..4130787)
+ /gene="rplV"
+ /locus_tag="SARI_04194"
+ /note="protein-rRNA interface [nucleotide binding]; other
+ site"
+ /db_xref="CDD:238205"
+ misc_feature order(4130566..4130574,4130578..4130583,4130587..4130592,
+ 4130653..4130670,4130695..4130712,4130806..4130811)
+ /gene="rplV"
+ /locus_tag="SARI_04194"
+ /note="putative translocon binding site; other site"
+ /db_xref="CDD:238205"
+ gene 4130841..4131542
+ /gene="rpsC"
+ /locus_tag="SARI_04195"
+ CDS 4130841..4131542
+ /gene="rpsC"
+ /locus_tag="SARI_04195"
+ /inference="protein motif:Gene3D:IPR001351"
+ /inference="protein motif:Gene3D:IPR009019"
+ /inference="protein motif:HMMPfam:IPR001351"
+ /inference="protein motif:HMMPfam:IPR004044"
+ /inference="protein motif:HMMPfam:IPR008282"
+ /inference="protein motif:HMMSmart:IPR004087"
+ /inference="protein motif:HMMTigr:IPR005704"
+ /inference="protein motif:ScanRegExp:IPR001351"
+ /inference="protein motif:superfamily:IPR001351"
+ /inference="protein motif:superfamily:IPR009019"
+ /inference="similar to AA sequence:INSD:ABP62402.1"
+ /note="forms a complex with S10 and S14; binds the lower
+ part of the 30S subunit head and the mRNA in the complete
+ ribosome to position it for translation"
+ /codon_start=1
+ /transl_table=11
+ /product="30S ribosomal protein S3"
+ /protein_id="YP_001573126.1"
+ /db_xref="GI:161506014"
+ /db_xref="InterPro:IPR001351"
+ /db_xref="InterPro:IPR004044"
+ /db_xref="InterPro:IPR004087"
+ /db_xref="InterPro:IPR005704"
+ /db_xref="InterPro:IPR008282"
+ /db_xref="InterPro:IPR009019"
+ /translation="MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLT
+ KELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQIN
+ IAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGA
+ EIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPE
+ KPAAQPKKQQRKGRK"
+ misc_feature 4130841..4131479
+ /gene="rpsC"
+ /locus_tag="SARI_04195"
+ /note="30S ribosomal protein S3; Reviewed; Region: rpsC;
+ PRK00310"
+ /db_xref="CDD:234722"
+ misc_feature 4130844..4131167
+ /gene="rpsC"
+ /locus_tag="SARI_04195"
+ /note="K homology RNA-binding (KH) domain of the
+ prokaryotic 30S small ribosomal subunit protein S3. S3 is
+ part of the head region of the 30S ribosomal subunit and
+ is believed to interact with mRNA as it threads its way
+ from the latch into the channel. The KH...; Region:
+ 30S_S3_KH; cd02412"
+ /db_xref="CDD:239095"
+ misc_feature 4131072..4131083
+ /gene="rpsC"
+ /locus_tag="SARI_04195"
+ /note="G-X-X-G motif; other site"
+ /db_xref="CDD:239095"
+ misc_feature 4131195..4131446
+ /gene="rpsC"
+ /locus_tag="SARI_04195"
+ /note="Ribosomal protein S3, C-terminal domain; Region:
+ Ribosomal_S3_C; pfam00189"
+ /db_xref="CDD:215779"
+ unsure 4131092..4131395
+ /gene="rpsC"
+ /locus_tag="SARI_04195"
+ /note="Sequence derived from one plasmid subclone"
+ gene 4131555..4131965
+ /gene="rplP"
+ /locus_tag="SARI_04196"
+ CDS 4131555..4131965
+ /gene="rplP"
+ /locus_tag="SARI_04196"
+ /inference="protein motif:HMMPfam:IPR000114"
+ /inference="protein motif:HMMTigr:IPR000114"
+ /inference="protein motif:ScanRegExp:IPR000114"
+ /inference="similar to AA sequence:INSD:AAX67273.1"
+ /note="located in the peptidyl transferase center and may
+ be involved in peptidyl transferase activity; similar to
+ archaeal L10e"
+ /codon_start=1
+ /transl_table=11
+ /product="50S ribosomal protein L16"
+ /protein_id="YP_001573127.1"
+ /db_xref="GI:161506015"
+ /db_xref="InterPro:IPR000114"
+ /translation="MLQPKRTKFRKMHKGRNRGLAAGADVSFGSFGLKAVGRGRLTAR
+ QIEAARRAMTRAVKRQGKIWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGKVL
+ YEMDGVPEELAREAFKLAAAKLPIKTTFVTKTVM"
+ misc_feature 4131618..4131947
+ /gene="rplP"
+ /locus_tag="SARI_04196"
+ /note="Ribosomal_L16_L10e: L16 is an essential protein in
+ the large ribosomal subunit of bacteria, mitochondria, and
+ chloroplasts. Large subunits that lack L16 are defective
+ in peptidyl transferase activity, peptidyl-tRNA hydrolysis
+ activity, association with...; Region: Ribosomal_L16_L10e;
+ cd01433"
+ /db_xref="CDD:238714"
+ misc_feature order(4131618..4131620,4131624..4131629,4131636..4131638,
+ 4131684..4131689,4131696..4131698,4131705..4131707,
+ 4131717..4131719,4131726..4131728,4131744..4131752,
+ 4131756..4131758,4131762..4131764,4131774..4131779,
+ 4131798..4131812,4131852..4131854,4131906..4131911,
+ 4131918..4131923)
+ /gene="rplP"
+ /locus_tag="SARI_04196"
+ /note="23S rRNA interface [nucleotide binding]; other
+ site"
+ /db_xref="CDD:238714"
+ misc_feature 4131663..4131668
+ /gene="rplP"
+ /locus_tag="SARI_04196"
+ /note="5S rRNA interface [nucleotide binding]; other site"
+ /db_xref="CDD:238714"
+ misc_feature order(4131699..4131707,4131714..4131719)
+ /gene="rplP"
+ /locus_tag="SARI_04196"
+ /note="putative antibiotic binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:238714"
+ misc_feature order(4131726..4131728,4131735..4131740,4131744..4131746,
+ 4131870..4131872)
+ /gene="rplP"
+ /locus_tag="SARI_04196"
+ /note="L25 interface [polypeptide binding]; other site"
+ /db_xref="CDD:238714"
+ misc_feature order(4131792..4131797,4131804..4131809)
+ /gene="rplP"
+ /locus_tag="SARI_04196"
+ /note="L27 interface [polypeptide binding]; other site"
+ /db_xref="CDD:238714"
+ gene 4131965..4132156
+ /locus_tag="SARI_04197"
+ CDS 4131965..4132156
+ /locus_tag="SARI_04197"
+ /inference="protein motif:HMMPfam:IPR001854"
+ /inference="protein motif:HMMTigr:IPR001854"
+ /inference="protein motif:ScanRegExp:IPR001854"
+ /inference="protein motif:superfamily:IPR001854"
+ /inference="similar to AA sequence:INSD:AAX67272.1"
+ /note="one of the stabilizing components for the large
+ ribosomal subunit"
+ /codon_start=1
+ /transl_table=11
+ /product="50S ribosomal protein L29"
+ /protein_id="YP_001573128.1"
+ /db_xref="GI:161506016"
+ /db_xref="InterPro:IPR001854"
+ /translation="MKAKELREKSVEELNTELLNLLREQFNLRMQAASGQLQQSHLLK
+ QVRRDVARVKTLLTEKAGA"
+ misc_feature 4131974..4132144
+ /locus_tag="SARI_04197"
+ /note="Ribosomal L29 protein/HIP. L29 is a protein of the
+ large ribosomal Subunit. A homolog, called heparin/heparan
+ sulfate interacting protein (HIP), has also been
+ identified in mammals. L29 is located on the surface of
+ the large ribosomal subunit, where it...; Region:
+ Ribosomal_L29_HIP; cd00427"
+ /db_xref="CDD:238243"
+ misc_feature order(4131974..4131976,4131983..4131985,4132085..4132087,
+ 4132115..4132120,4132124..4132129,4132139..4132141)
+ /locus_tag="SARI_04197"
+ /note="23S rRNA interface [nucleotide binding]; other
+ site"
+ /db_xref="CDD:238243"
+ misc_feature order(4131974..4131982,4131986..4131988,4131998..4132003,
+ 4132007..4132012,4132019..4132024,4132031..4132036,
+ 4132043..4132045,4132052..4132057,4132079..4132081,
+ 4132088..4132090,4132100..4132102,4132109..4132114,
+ 4132121..4132126,4132133..4132135)
+ /locus_tag="SARI_04197"
+ /note="putative translocon interaction site; other site"
+ /db_xref="CDD:238243"
+ misc_feature order(4132022..4132024,4132034..4132036,4132043..4132045,
+ 4132055..4132057,4132100..4132102)
+ /locus_tag="SARI_04197"
+ /note="signal recognition particle (SRP54) interaction
+ site; other site"
+ /db_xref="CDD:238243"
+ misc_feature order(4132040..4132042,4132049..4132054)
+ /locus_tag="SARI_04197"
+ /note="L23 interface [polypeptide binding]; other site"
+ /db_xref="CDD:238243"
+ misc_feature 4132061..4132066
+ /locus_tag="SARI_04197"
+ /note="trigger factor interaction site; other site"
+ /db_xref="CDD:238243"
+ gene 4132156..4132410
+ /gene="rpsQ"
+ /locus_tag="SARI_04198"
+ CDS 4132156..4132410
+ /gene="rpsQ"
+ /locus_tag="SARI_04198"
+ /inference="protein motif:BlastProDom:IPR000266"
+ /inference="protein motif:Gene3D:IPR012340"
+ /inference="protein motif:HMMPanther:IPR000266"
+ /inference="protein motif:HMMPfam:IPR000266"
+ /inference="protein motif:ScanRegExp:IPR000266"
+ /inference="protein motif:superfamily:IPR008994"
+ /inference="similar to AA sequence:INSD:AAX67271.1"
+ /note="primary binding protein; helps mediate assembly;
+ involved in translation fidelity"
+ /codon_start=1
+ /transl_table=11
+ /product="30S ribosomal protein S17"
+ /protein_id="YP_001573129.1"
+ /db_xref="GI:161506017"
+ /db_xref="InterPro:IPR000266"
+ /db_xref="InterPro:IPR008994"
+ /db_xref="InterPro:IPR012340"
+ /translation="MTDKIRTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKM
+ HVHDENNECGIGDVVEIRECRPLSKTKSWTLVRVVEKAVL"
+ misc_feature 4132156..4132404
+ /gene="rpsQ"
+ /locus_tag="SARI_04198"
+ /note="30S ribosomal protein S17; Reviewed; Region: rpsQ;
+ PRK05610"
+ /db_xref="CDD:235532"
+ gene 4132574..4132945
+ /gene="rplN"
+ /locus_tag="SARI_04199"
+ CDS 4132574..4132945
+ /gene="rplN"
+ /locus_tag="SARI_04199"
+ /inference="protein motif:BlastProDom:IPR000218"
+ /inference="protein motif:Gene3D:IPR000218"
+ /inference="protein motif:HMMPanther:IPR000218"
+ /inference="protein motif:HMMPfam:IPR000218"
+ /inference="protein motif:HMMTigr:IPR005745"
+ /inference="protein motif:ScanRegExp:IPR000218"
+ /inference="protein motif:superfamily:IPR000218"
+ /inference="similar to AA sequence:INSD:CAG76918.1"
+ /note="binds to the 23S rRNA between the centers for
+ peptidyl transferase and GTPase"
+ /codon_start=1
+ /transl_table=11
+ /product="50S ribosomal protein L14"
+ /protein_id="YP_001573130.1"
+ /db_xref="GI:161506018"
+ /db_xref="InterPro:IPR000218"
+ /db_xref="InterPro:IPR005745"
+ /translation="MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIK
+ EAIPRGKVKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVILNNNSEQPIGTRIFGP
+ VTRELRNEKFMKIISLAPEVL"
+ misc_feature 4132574..4132942
+ /gene="rplN"
+ /locus_tag="SARI_04199"
+ /note="50S ribosomal protein L14; Validated; Region: rplN;
+ PRK05483"
+ /db_xref="CDD:180117"
+ gene 4132956..4133270
+ /gene="rplX"
+ /locus_tag="SARI_04200"
+ CDS 4132956..4133270
+ /gene="rplX"
+ /locus_tag="SARI_04200"
+ /inference="protein motif:BlastProDom:IPR003256"
+ /inference="protein motif:HMMPanther:IPR003256"
+ /inference="protein motif:HMMPfam:IPR005824"
+ /inference="protein motif:HMMSmart:IPR006646"
+ /inference="protein motif:HMMTigr:IPR003256"
+ /inference="protein motif:ScanRegExp:IPR005825"
+ /inference="protein motif:superfamily:IPR008991"
+ /inference="similar to AA sequence:INSD:AAL22292.1"
+ /note="assembly initiator protein; binds to 5' end of 23S
+ rRNA and nucleates assembly of the 50S; surrounds
+ polypeptide exit tunnel"
+ /codon_start=1
+ /transl_table=11
+ /product="50S ribosomal protein L24"
+ /protein_id="YP_001573131.1"
+ /db_xref="GI:161506019"
+ /db_xref="InterPro:IPR003256"
+ /db_xref="InterPro:IPR005824"
+ /db_xref="InterPro:IPR005825"
+ /db_xref="InterPro:IPR006646"
+ /db_xref="InterPro:IPR008991"
+ /translation="MAAKIRRDDEVIVLTGKDKGKRGKVKNVLSSGKVIVEGINLVKK
+ HQKPVPALNQPGGIVEKEAAIQVSNVAIFNAATGKADRVGFRFEDGKKVRFFKSNSET
+ IK"
+ misc_feature 4132956..4133267
+ /gene="rplX"
+ /locus_tag="SARI_04200"
+ /note="50S ribosomal protein L24; Reviewed; Region: rplX;
+ PRK00004"
+ /db_xref="CDD:234566"
+ misc_feature 4132977..4133171
+ /gene="rplX"
+ /locus_tag="SARI_04200"
+ /note="KOW motif of Ribosomal Protein L26; Region:
+ KOW_RPL26; cd06089"
+ /db_xref="CDD:240513"
+ misc_feature order(4132998..4133006,4133040..4133042,4133082..4133087,
+ 4133154..4133159)
+ /gene="rplX"
+ /locus_tag="SARI_04200"
+ /note="RNA binding site [nucleotide binding]; other site"
+ /db_xref="CDD:240513"
+ gene 4133285..4133824
+ /gene="rplE"
+ /locus_tag="SARI_04201"
+ CDS 4133285..4133824
+ /gene="rplE"
+ /locus_tag="SARI_04201"
+ /inference="protein motif:BlastProDom:IPR003236"
+ /inference="protein motif:HMMPanther:IPR002132"
+ /inference="protein motif:HMMPfam:IPR002132"
+ /inference="protein motif:ScanRegExp:IPR002132"
+ /inference="similar to AA sequence:INSD:ABB67790.1"
+ /note="part of 50S and 5S/L5/L18/L25 subcomplex; contacts
+ 5S rRNA and P site tRNA; forms a bridge to the 30S subunit
+ in the ribosome by binding to S13"
+ /codon_start=1
+ /transl_table=11
+ /product="50S ribosomal protein L5"
+ /protein_id="YP_001573132.1"
+ /db_xref="GI:161506020"
+ /db_xref="InterPro:IPR002132"
+ /db_xref="InterPro:IPR003236"
+ /translation="MAKLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAI
+ ADKKLLDNAAADLTAISGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFER
+ LITIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTA
+ KSDEEGRALLAAFDFPFRK"
+ misc_feature 4133285..4133821
+ /gene="rplE"
+ /locus_tag="SARI_04201"
+ /note="50S ribosomal protein L5; Validated; Region: rplE;
+ PRK00010"
+ /db_xref="CDD:178791"
+ misc_feature 4133354..4133524
+ /gene="rplE"
+ /locus_tag="SARI_04201"
+ /note="Ribosomal protein L5; Region: Ribosomal_L5;
+ pfam00281"
+ /db_xref="CDD:109342"
+ misc_feature 4133534..4133818
+ /gene="rplE"
+ /locus_tag="SARI_04201"
+ /note="ribosomal L5P family C-terminus; Region:
+ Ribosomal_L5_C; pfam00673"
+ /db_xref="CDD:201383"
+ unsure 4133688..4133748
+ /gene="rplE"
+ /locus_tag="SARI_04201"
+ /note="Sequence derived from one plasmid subclone"
+ gene 4133839..4134144
+ /gene="rpsN"
+ /locus_tag="SARI_04202"
+ CDS 4133839..4134144
+ /gene="rpsN"
+ /locus_tag="SARI_04202"
+ /inference="protein motif:HMMPfam:IPR001209"
+ /inference="protein motif:ScanRegExp:IPR001209"
+ /inference="similar to AA sequence:SwissProt:P46179"
+ /note="'located in the peptidyl transferase center and
+ involved in assembly of 30S ribosome subunit; similar to
+ what is observed with proteins L31 and L33, some proteins
+ in this family contain CXXC motifs that are involved in
+ zinc binding; if two copies are present in a genome, then
+ the duplicated copy appears to have lost the zinc-binding
+ motif and is instead regulated by zinc; the proteins in
+ this group do not appear to have the zinc-binding motif'"
+ /codon_start=1
+ /transl_table=11
+ /product="30S ribosomal protein S14"
+ /protein_id="YP_001573133.1"
+ /db_xref="GI:161506021"
+ /db_xref="InterPro:IPR001209"
+ /translation="MAKQSMKAREVKRVALADKYFAKRAELKAIISDVNASDEDRWNA
+ VLKLQSLPRDSSPSRQRNRCRQTGRPHGYVGKFGLSRIKLREAAMRGEVPGLKKASW"
+ misc_feature 4133839..4134141
+ /gene="rpsN"
+ /locus_tag="SARI_04202"
+ /note="30S ribosomal protein S14; Reviewed; Region: rpsN;
+ PRK08881"
+ /db_xref="CDD:181574"
+ gene 4134178..4134570
+ /gene="rpsH"
+ /locus_tag="SARI_04203"
+ CDS 4134178..4134570
+ /gene="rpsH"
+ /locus_tag="SARI_04203"
+ /inference="protein motif:BlastProDom:IPR000630"
+ /inference="protein motif:HMMPanther:IPR000630"
+ /inference="protein motif:HMMPfam:IPR000630"
+ /inference="protein motif:ScanRegExp:IPR000630"
+ /inference="protein motif:superfamily:IPR000630"
+ /inference="similar to AA sequence:INSD:ABJ02785.1"
+ /note="binds directly to 16S rRNA central domain where it
+ helps coordinate assembly of the platform of the 30S
+ subunit"
+ /codon_start=1
+ /transl_table=11
+ /product="30S ribosomal protein S8"
+ /protein_id="YP_001573134.1"
+ /db_xref="GI:161506022"
+ /db_xref="InterPro:IPR000630"
+ /translation="MSMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEG
+ FIEDFKVEGDTKPELELTLKYFQGKAVVESIQRVSRPGLRIYKGKDELPKVMAGLGIA
+ VVSTSKGVMTDRAARQAGLGGEIICYVA"
+ misc_feature 4134181..4134567
+ /gene="rpsH"
+ /locus_tag="SARI_04203"
+ /note="30S ribosomal protein S8; Validated; Region: rpsH;
+ PRK00136"
+ /db_xref="CDD:234658"
+ gene 4134583..4135116
+ /gene="rplF"
+ /locus_tag="SARI_04204"
+ CDS 4134583..4135116
+ /gene="rplF"
+ /locus_tag="SARI_04204"
+ /inference="protein motif:BlastProDom:IPR000702"
+ /inference="protein motif:Gene3D:IPR000702"
+ /inference="protein motif:HMMPanther:IPR000702"
+ /inference="protein motif:HMMPfam:IPR000702"
+ /inference="protein motif:ScanRegExp:IPR002358"
+ /inference="similar to AA sequence:INSD:AAX67265.1"
+ /note="ribosomal protein L6 appears to have arisen as a
+ result of an ancient gene duplication as based on
+ structural comparison of the Bacillus stearothermophilus
+ protein; RNA-binding appears to be in the C-terminal
+ domain; mutations in the L6 gene confer resistance to
+ aminoglycoside antibiotics such as gentamicin and these
+ occur in truncations of the C-terminal domain; it has been
+ localized to a region between the base of the L7/L12 stalk
+ and the central protuberance"
+ /codon_start=1
+ /transl_table=11
+ /product="50S ribosomal protein L6"
+ /protein_id="YP_001573135.1"
+ /db_xref="GI:161506023"
+ /db_xref="InterPro:IPR000702"
+ /db_xref="InterPro:IPR002358"
+ /translation="MSRVAKAPVVVPAGVDVKINGQVITIKGKNGELTRTLNDAVEVK
+ HVDNALTFGPRDGYADGWAQAGTARALLNSMVIGVTEGFTKKLQLVGVGYRAAVKGNV
+ VNLSLGFSHPVDHQLPAGITAECPTQTEIVLKGADKQVIGQVAADLRAYRRPEPYKGK
+ GVRYADEVVRTKEAKKK"
+ misc_feature 4134583..4135113
+ /gene="rplF"
+ /locus_tag="SARI_04204"
+ /note="50S ribosomal protein L6; Validated; Region: rplF;
+ PRK05498"
+ /db_xref="CDD:235495"
+ misc_feature 4134640..4134828
+ /gene="rplF"
+ /locus_tag="SARI_04204"
+ /note="Ribosomal protein L6; Region: Ribosomal_L6;
+ pfam00347"
+ /db_xref="CDD:215872"
+ misc_feature 4134850..4135074
+ /gene="rplF"
+ /locus_tag="SARI_04204"
+ /note="Ribosomal protein L6; Region: Ribosomal_L6;
+ pfam00347"
+ /db_xref="CDD:215872"
+ gene 4135126..4135479
+ /gene="rplR"
+ /locus_tag="SARI_04205"
+ CDS 4135126..4135479
+ /gene="rplR"
+ /locus_tag="SARI_04205"
+ /inference="protein motif:BlastProDom:IPR005484"
+ /inference="protein motif:HMMPfam:IPR005484"
+ /inference="protein motif:HMMTigr:IPR004389"
+ /inference="similar to AA sequence:INSD:AAX67264.1"
+ /note="binds 5S rRNA along with protein L5 and L25"
+ /codon_start=1
+ /transl_table=11
+ /product="50S ribosomal protein L18"
+ /protein_id="YP_001573136.1"
+ /db_xref="GI:161506024"
+ /db_xref="InterPro:IPR004389"
+ /db_xref="InterPro:IPR005484"
+ /translation="MDKKSARIRRATRARRKLKELGATRLVVHRTPRHIYAQVIAPNG
+ SEVLVAASTVEKAIAEQLKYTGNKDAAAAVGKAVAERALEKGIKDVSFDRSGFQYHGR
+ VQALADAAREAGLQF"
+ misc_feature 4135174..4135470
+ /gene="rplR"
+ /locus_tag="SARI_04205"
+ /note="Ribosomal L18/L5e: L18 (L5e) is a ribosomal
+ protein found in the central protuberance (CP) of the
+ large subunit. L18 binds 5S rRNA and induces a
+ conformational change that stimulates the binding of L5 to
+ 5S rRNA. Association of 5S rRNA with 23S rRNA...; Region:
+ Ribosomal_L18_L5e; cd00432"
+ /db_xref="CDD:238246"
+ misc_feature order(4135174..4135176,4135399..4135401,4135408..4135410,
+ 4135456..4135458)
+ /gene="rplR"
+ /locus_tag="SARI_04205"
+ /note="23S rRNA interface [nucleotide binding]; other
+ site"
+ /db_xref="CDD:238246"
+ misc_feature order(4135174..4135179,4135183..4135185,4135198..4135200,
+ 4135210..4135227,4135231..4135233,4135237..4135239,
+ 4135258..4135266,4135273..4135275,4135396..4135398,
+ 4135429..4135431)
+ /gene="rplR"
+ /locus_tag="SARI_04205"
+ /note="5S rRNA interface [nucleotide binding]; other site"
+ /db_xref="CDD:238246"
+ misc_feature 4135177..4135182
+ /gene="rplR"
+ /locus_tag="SARI_04205"
+ /note="L27 interface [polypeptide binding]; other site"
+ /db_xref="CDD:238246"
+ misc_feature 4135414..4135416
+ /gene="rplR"
+ /locus_tag="SARI_04205"
+ /note="L5 interface [polypeptide binding]; other site"
+ /db_xref="CDD:238246"
+ gene 4135494..4135997
+ /gene="rpsE"
+ /locus_tag="SARI_04206"
+ CDS 4135494..4135997
+ /gene="rpsE"
+ /locus_tag="SARI_04206"
+ /inference="protein motif:Gene3D:IPR013810"
+ /inference="protein motif:HMMPanther:IPR000851"
+ /inference="protein motif:HMMPfam:IPR005324"
+ /inference="protein motif:HMMPfam:IPR013810"
+ /inference="protein motif:HMMTigr:IPR005712"
+ /inference="protein motif:ScanRegExp:IPR013810"
+ /inference="similar to AA sequence:INSD:EAY45557.1"
+ /note="located at the back of the 30S subunit body where
+ it stabilizes the conformation of the head with respect to
+ the body; contacts S4 and S8; with S4 and S12 plays a role
+ in translational accuracy; mutations in this gene result
+ in spectinomycin resistance"
+ /codon_start=1
+ /transl_table=11
+ /product="30S ribosomal protein S5"
+ /protein_id="YP_001573138.1"
+ /db_xref="GI:161506025"
+ /db_xref="InterPro:IPR000851"
+ /db_xref="InterPro:IPR005324"
+ /db_xref="InterPro:IPR005712"
+ /db_xref="InterPro:IPR013810"
+ /translation="MAHIEKQAGELQEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNG
+ RVGFGYGKAREVPAAIQKAMEKARRNMINVALNNGTLQHPVKGVHTGSRVFMQPASEG
+ TGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIDGLENMNSPEMVAAKRGKS
+ VEEILGK"
+ misc_feature 4135494..4135991
+ /gene="rpsE"
+ /locus_tag="SARI_04206"
+ /note="30S ribosomal protein S5; Validated; Region: rpsE;
+ PRK00550"
+ /db_xref="CDD:234790"
+ misc_feature 4135521..4135721
+ /gene="rpsE"
+ /locus_tag="SARI_04206"
+ /note="Ribosomal protein S5, N-terminal domain; Region:
+ Ribosomal_S5; pfam00333"
+ /db_xref="CDD:144065"
+ misc_feature 4135746..4135967
+ /gene="rpsE"
+ /locus_tag="SARI_04206"
+ /note="Ribosomal protein S5, C-terminal domain; Region:
+ Ribosomal_S5_C; pfam03719"
+ /db_xref="CDD:190724"
+ gene 4136001..4136180
+ /gene="rpmD"
+ /locus_tag="SARI_04207"
+ CDS 4136001..4136180
+ /gene="rpmD"
+ /locus_tag="SARI_04207"
+ /inference="protein motif:HMMPfam:IPR000517"
+ /inference="protein motif:HMMTigr:IPR005996"
+ /inference="protein motif:ScanRegExp:IPR000517"
+ /inference="similar to AA sequence:INSD:AAX67262.1"
+ /note="L30 binds domain II of the 23S rRNA and the 5S
+ rRNA; similar to eukaryotic protein L7"
+ /codon_start=1
+ /transl_table=11
+ /product="50S ribosomal protein L30"
+ /protein_id="YP_001573139.1"
+ /db_xref="GI:161506026"
+ /db_xref="InterPro:IPR000517"
+ /db_xref="InterPro:IPR005996"
+ /translation="MAKTIKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDTPAV
+ RGMVNAVSFMVKVEE"
+ misc_feature 4136013..4136174
+ /gene="rpmD"
+ /locus_tag="SARI_04207"
+ /note="Ribosomal protein L30, which is found in eukaryotes
+ and prokaryotes but not in archaea, is one of the smallest
+ ribosomal proteins with a molecular mass of about 7kDa.
+ L30 binds the 23SrRNA as well as the 5S rRNA and is one of
+ five ribosomal proteins that...; Region: Ribosomal_L30;
+ cd01658"
+ /db_xref="CDD:100100"
+ misc_feature order(4136031..4136036,4136040..4136045,4136049..4136057,
+ 4136064..4136069,4136076..4136084,4136088..4136090,
+ 4136097..4136099,4136112..4136117,4136124..4136132,
+ 4136136..4136141)
+ /gene="rpmD"
+ /locus_tag="SARI_04207"
+ /note="23S rRNA binding site [nucleotide binding]; other
+ site"
+ /db_xref="CDD:100100"
+ gene 4136184..4136618
+ /gene="rplO"
+ /locus_tag="SARI_04209"
+ CDS 4136184..4136618
+ /gene="rplO"
+ /locus_tag="SARI_04209"
+ /inference="protein motif:HMMPfam:IPR001196"
+ /inference="protein motif:HMMTigr:IPR005749"
+ /inference="protein motif:ScanRegExp:IPR001196"
+ /inference="similar to AA sequence:INSD:ABE09184.1"
+ /note="late assembly protein"
+ /codon_start=1
+ /transl_table=11
+ /product="50S ribosomal protein L15"
+ /protein_id="YP_001573140.1"
+ /db_xref="GI:161506028"
+ /db_xref="InterPro:IPR001196"
+ /db_xref="InterPro:IPR005749"
+ /translation="MRLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQKSRSGG
+ GVRRGFEGGQMPLYRRLPKFGFTSRKAAITAEVRLSDLAKVEGGVVDLNTLKATNIIG
+ IQIEFAKVILAGEVTTPVTVRGLRVTKGARAAIEAAGGKIEE"
+ misc_feature 4136184..4136567
+ /gene="rplO"
+ /locus_tag="SARI_04209"
+ /note="50S ribosomal protein L15; Reviewed; Region: rplO;
+ PRK05592"
+ /db_xref="CDD:235523"
+ unsure 4136313..4136678
+ /note="Sequence derived from one plasmid subclone"
+ gene 4136626..4137957
+ /gene="secY"
+ /locus_tag="SARI_04210"
+ CDS 4136626..4137957
+ /gene="secY"
+ /locus_tag="SARI_04210"
+ /inference="protein motif:FPrintScan:IPR002208"
+ /inference="protein motif:HMMPanther:IPR002208"
+ /inference="protein motif:HMMPfam:IPR002208"
+ /inference="protein motif:HMMTigr:IPR002208"
+ /inference="protein motif:ScanRegExp:IPR002208"
+ /inference="similar to AA sequence:INSD:AAV79102.1"
+ /note="forms heterotrimeric complex in the membrane; in
+ bacteria the complex consists of SecY which forms the
+ channel pore and SecE and SecG; the SecG subunit is not
+ essential; in bacteria translocation is driven via the
+ SecA ATPase"
+ /codon_start=1
+ /transl_table=11
+ /product="preprotein translocase subunit SecY"
+ /protein_id="YP_001573141.1"
+ /db_xref="GI:161506029"
+ /db_xref="InterPro:IPR002208"
+ /translation="MAKQPGLDFQSAKGGLGELKRRLLFVIGALIVFRIGSFIPIPGI
+ DAAVLAKLLEQQRGTIIEMFNMFSGGALSRASIFALGIMPYISASIIIQLLTVVHPTL
+ AEIKKEGESGRRKISQYTRYGTLVLAIFQSIGIATGLPNMPGMQGLVMNPGFAFYFTA
+ VVSLVTGTMFLMWLGEQITERGIGNGISIIIFAGIVAGLPPAIAHTIEQARQGDLHFL
+ VLLLVAVLVFAVTFFVVFVERGQRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVIP
+ AIFASSIILFPATIASWFGGGTGWNWLTTISLYLQPGQPLYVLLYASAIIFFCFFYTA
+ LVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLVGALYITFICLIPEFMR
+ DAMKVPFYFGGTSLLIVVVVIMDFMAQVQTLMMSSQYESALKKANLKGYGR"
+ misc_feature 4136698..4137924
+ /gene="secY"
+ /locus_tag="SARI_04210"
+ /note="preprotein translocase subunit SecY; Reviewed;
+ Region: secY; PRK09204"
+ /db_xref="CDD:236412"
+ misc_feature 4136851..4137876
+ /gene="secY"
+ /locus_tag="SARI_04210"
+ /note="SecY translocase; Region: SecY; pfam00344"
+ /db_xref="CDD:215869"
+ misc_feature 4138173..4138284
+ /inference="nucleotide motif:Rfam:RF00140"
+ /note="alpha operon ribosome binding site"
+ gene 4138252..4138608
+ /locus_tag="SARI_04210a"
+ CDS 4138252..4138608
+ /locus_tag="SARI_04210a"
+ /codon_start=1
+ /transl_table=11
+ /product="ribosomal protein S13"
+ /protein_id="YP_004767287.1"
+ /db_xref="GI:341904765"
+ /translation="MARIAGINIPDQKHAVIALTSIYGIGKTRSKAILAAAGIAENVK
+ ISELSEEQIDTLRDEVAKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRT
+ KTNARTRKGPRKPIKK"
+ misc_feature 4138252..4138605
+ /locus_tag="SARI_04210a"
+ /note="30S ribosomal protein S13; Validated; Region: rpsM;
+ PRK05179"
+ /db_xref="CDD:235358"
+ misc_feature 4138258..4138593
+ /locus_tag="SARI_04210a"
+ /note="30S ribosomal protein S13; Region: bact_S13;
+ TIGR03631"
+ /db_xref="CDD:213840"
+ gene 4138625..4139014
+ /locus_tag="SARI_04211"
+ CDS 4138625..4139014
+ /locus_tag="SARI_04211"
+ /inference="protein motif:BlastProDom:IPR001971"
+ /inference="protein motif:Gene3D:IPR001971"
+ /inference="protein motif:HMMPanther:IPR001971"
+ /inference="protein motif:HMMPfam:IPR001971"
+ /inference="protein motif:ScanRegExp:IPR001971"
+ /inference="similar to AA sequence:INSD:ABJ02778.1"
+ /note="'located on the platform of the 30S subunit, it
+ bridges several disparate RNA helices of the 16S rRNA;
+ forms part of the Shine-Dalgarno cleft in the 70S
+ ribosome; interacts with S7 and S18 and IF-3'"
+ /codon_start=1
+ /transl_table=11
+ /product="30S ribosomal protein S11"
+ /protein_id="YP_001573142.1"
+ /db_xref="GI:161506030"
+ /db_xref="InterPro:IPR001971"
+ /translation="MAKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGW
+ ATAGGSGFRGSRKSTPFAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNA
+ AGFRITNITDVTPIPHNGCRPPKKRRV"
+ misc_feature 4138628..4139011
+ /locus_tag="SARI_04211"
+ /note="30S ribosomal protein S11; Validated; Region:
+ PRK05309"
+ /db_xref="CDD:180007"
+ gene 4139048..4139668
+ /gene="rpsD"
+ /locus_tag="SARI_04212"
+ CDS 4139048..4139668
+ /gene="rpsD"
+ /locus_tag="SARI_04212"
+ /inference="protein motif:HMMPanther:IPR001912"
+ /inference="protein motif:HMMPfam:IPR001912"
+ /inference="protein motif:HMMPfam:IPR002942"
+ /inference="protein motif:HMMSmart:IPR002942"
+ /inference="protein motif:HMMTigr:IPR005709"
+ /inference="protein motif:ScanRegExp:IPR001912"
+ /inference="similar to AA sequence:INSD:AAL22279.1"
+ /note="primary rRNA binding protein; nucleates 30S
+ assembly; involved in translational accuracy with proteins
+ S5 and S12; interacts with protein S5; involved in
+ autogeneously regulating ribosomal proteins by binding to
+ pseudoknot structures in the polycistronic mRNA; interacts
+ with transcription complex and functions similar to
+ protein NusA in antitermination"
+ /codon_start=1
+ /transl_table=11
+ /product="30S ribosomal protein S4"
+ /protein_id="YP_001573143.1"
+ /db_xref="GI:161506031"
+ /db_xref="InterPro:IPR001912"
+ /db_xref="InterPro:IPR002942"
+ /db_xref="InterPro:IPR005709"
+ /translation="MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGAR
+ KPRLSDYGVQLREKQKVRRIYGVLERQFRNYYKEAARLKGNTGENLLALLEGRLDNVV
+ YRMGFGATRAEARQLVSHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALE
+ LAEQREKPTWLEVDAGKMEGTYKRKPERSDLSADINEHLIVELYSK"
+ misc_feature 4139048..4139665
+ /gene="rpsD"
+ /locus_tag="SARI_04212"
+ /note="30S ribosomal protein S4; Validated; Region: rpsD;
+ PRK05327"
+ /db_xref="CDD:235411"
+ misc_feature 4139051..4139332
+ /gene="rpsD"
+ /locus_tag="SARI_04212"
+ /note="Ribosomal protein S4/S9 N-terminal domain; Region:
+ Ribosomal_S4; pfam00163"
+ /db_xref="CDD:215762"
+ misc_feature 4139336..4139515
+ /gene="rpsD"
+ /locus_tag="SARI_04212"
+ /note="S4/Hsp/ tRNA synthetase RNA-binding domain; The
+ domain surface is populated by conserved, charged residues
+ that define a likely RNA-binding site; Found in stress
+ proteins, ribosomal proteins and tRNA synthetases; This
+ may imply a hitherto unrecognized...; Region: S4; cd00165"
+ /db_xref="CDD:238095"
+ misc_feature order(4139336..4139338,4139372..4139377,4139381..4139386,
+ 4139390..4139395,4139402..4139407,4139411..4139413,
+ 4139432..4139455,4139459..4139461)
+ /gene="rpsD"
+ /locus_tag="SARI_04212"
+ /note="RNA binding surface [nucleotide binding]; other
+ site"
+ /db_xref="CDD:238095"
+ gene 4139694..4140683
+ /locus_tag="SARI_04213"
+ CDS 4139694..4140683
+ /locus_tag="SARI_04213"
+ /inference="protein motif:BlastProDom:IPR011260"
+ /inference="protein motif:Gene3D:IPR011262"
+ /inference="protein motif:HMMPfam:IPR011260"
+ /inference="protein motif:HMMPfam:IPR011261"
+ /inference="protein motif:HMMPfam:IPR011262"
+ /inference="protein motif:HMMSmart:IPR011263"
+ /inference="protein motif:HMMTigr:IPR011773"
+ /inference="protein motif:superfamily:IPR009025"
+ /inference="protein motif:superfamily:IPR011262"
+ /inference="similar to AA sequence:INSD:ABJ02776.1"
+ /note="catalyzes the transcription of DNA into RNA using
+ the four ribonucleoside triphosphates as substrates.
+ Dimerization of the alpha subunit is the first step in the
+ sequential assembly of subunits to form the holoenzyme"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-directed RNA polymerase subunit alpha"
+ /protein_id="YP_001573144.1"
+ /db_xref="GI:161506032"
+ /db_xref="InterPro:IPR009025"
+ /db_xref="InterPro:IPR011260"
+ /db_xref="InterPro:IPR011261"
+ /db_xref="InterPro:IPR011262"
+ /db_xref="InterPro:IPR011263"
+ /db_xref="InterPro:IPR011773"
+ /translation="MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALR
+ RILLSSMPGCAVTEVEIDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTL
+ NKSGIGPVTAADITHDGDVEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASTRIH
+ SEEDERPIGRLLVDACYSPVERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIR
+ RAATILAEQLEAFVDLRDVRQPEVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIH
+ YIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPASIADE"
+ misc_feature 4139709..4140641
+ /locus_tag="SARI_04213"
+ /note="DNA-directed RNA polymerase subunit alpha;
+ Provisional; Region: PRK05182"
+ /db_xref="CDD:235359"
+ misc_feature 4139733..4140386
+ /locus_tag="SARI_04213"
+ /note="N-terminal domain of the Alpha subunit of Bacterial
+ RNA polymerase; Region: RNAP_alpha_NTD; cd06928"
+ /db_xref="CDD:132904"
+ misc_feature order(4139733..4139735,4139739..4139741,4139775..4139777,
+ 4139784..4139786,4139790..4139798,4139805..4139807,
+ 4139817..4139819,4139826..4139831,4139841..4139843,
+ 4140354..4140356,4140363..4140368,4140372..4140377,
+ 4140381..4140386)
+ /locus_tag="SARI_04213"
+ /note="alphaNTD homodimer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:132904"
+ misc_feature order(4139766..4139768,4139802..4139804,4139814..4139816,
+ 4139823..4139828,4139889..4139891,4139895..4139897,
+ 4139901..4139903,4139907..4139918,4139931..4139933,
+ 4139949..4139951,4140093..4140095,4140147..4140149,
+ 4140213..4140215,4140219..4140221,4140237..4140245,
+ 4140249..4140260,4140288..4140290,4140297..4140299,
+ 4140303..4140305)
+ /locus_tag="SARI_04213"
+ /note="alphaNTD - beta interaction site [polypeptide
+ binding]; other site"
+ /db_xref="CDD:132904"
+ misc_feature order(4139895..4139897,4139931..4139933,4139940..4139942,
+ 4139949..4139954,4140144..4140149,4140153..4140155,
+ 4140219..4140221,4140234..4140239,4140264..4140266)
+ /locus_tag="SARI_04213"
+ /note="alphaNTD - beta' interaction site [polypeptide
+ binding]; other site"
+ /db_xref="CDD:132904"
+ misc_feature 4140420..4140620
+ /locus_tag="SARI_04213"
+ /note="Bacterial RNA polymerase, alpha chain C terminal
+ domain; Region: RNA_pol_A_CTD; pfam03118"
+ /db_xref="CDD:202541"
+ gene 4140781..4141110
+ /locus_tag="SARI_04214"
+ CDS 4140781..4141110
+ /locus_tag="SARI_04214"
+ /inference="protein motif:BlastProDom:IPR000456"
+ /inference="protein motif:HMMPanther:IPR000456"
+ /inference="protein motif:HMMPfam:IPR000456"
+ /inference="protein motif:HMMTigr:IPR000456"
+ /inference="protein motif:ScanRegExp:IPR000456"
+ /inference="similar to AA sequence:INSD:ABP62382.1"
+ /note="'COG: COG0203 Ribosomal protein L17;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573145.1"
+ /db_xref="GI:161506033"
+ /db_xref="InterPro:IPR000456"
+ /translation="MFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANR
+ RLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSES
+ KAEAAAE"
+ misc_feature 4140781..4141071
+ /locus_tag="SARI_04214"
+ /note="50S ribosomal protein L17; Validated; Region: rplQ;
+ PRK05591"
+ /db_xref="CDD:235522"
+ gene 4141218..4141586
+ /locus_tag="SARI_04215"
+ CDS 4141218..4141586
+ /locus_tag="SARI_04215"
+ /inference="similar to AA sequence:INSD:AAV79095.1"
+ /note="'COG: NOG18395 non supervised orthologous group;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573146.1"
+ /db_xref="GI:161506034"
+ /translation="MWLLDQWAERHIIEAQRKGEFDNLQGRGEPLILDDDSHVPAELR
+ AGYRLLKNAGCLPPELEQRRDAIQLLDILNSIREDDPRYHQVSRQLSLLELKLRQAGL
+ STDFLHGEYAEKLLHKINDN"
+ misc_feature 4141218..4141583
+ /locus_tag="SARI_04215"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10203"
+ /db_xref="CDD:182303"
+ gene 4141597..4142022
+ /gene="zntR"
+ /locus_tag="SARI_04216"
+ CDS 4141597..4142022
+ /gene="zntR"
+ /locus_tag="SARI_04216"
+ /inference="protein motif:FPrintScan:IPR000551"
+ /inference="protein motif:HMMPfam:IPR000551"
+ /inference="protein motif:HMMSmart:IPR000551"
+ /inference="protein motif:HMMTigr:IPR011788"
+ /inference="protein motif:ScanRegExp:IPR000551"
+ /inference="protein motif:superfamily:IPR009061"
+ /inference="similar to AA sequence:INSD:AAX67253.1"
+ /note="mediates expression of the zinc export protein ZntA
+ in response to high levels of zinc; member of MerR family
+ of transcriptional regulators"
+ /codon_start=1
+ /transl_table=11
+ /product="zinc-responsive transcriptional regulator"
+ /protein_id="YP_001573147.1"
+ /db_xref="GI:161506035"
+ /db_xref="InterPro:IPR000551"
+ /db_xref="InterPro:IPR009061"
+ /db_xref="InterPro:IPR011788"
+ /translation="MYRIGELAKLADVTPDTIRYYEKQQMMDYEVRTEGGFRLYTEND
+ LQRLKFIRYARQLGFTLESIRELLSIRIDPDNHTCQESKSIVQARLQEVEAKIAELQT
+ MQRSLQRLNDACCGTAHSSVYCSILEALEQGASGAKSGC"
+ misc_feature 4141597..4142016
+ /gene="zntR"
+ /locus_tag="SARI_04216"
+ /note="zinc-responsive transcriptional regulator;
+ Provisional; Region: zntR; PRK09514"
+ /db_xref="CDD:181924"
+ misc_feature 4141600..4141977
+ /gene="zntR"
+ /locus_tag="SARI_04216"
+ /note="Helix-Turn-Helix DNA binding domain of Heavy Metal
+ Resistance transcription regulators; Region: HTH_HMRTR;
+ cd04770"
+ /db_xref="CDD:133398"
+ misc_feature order(4141603..4141611,4141651..4141653,4141702..4141710)
+ /gene="zntR"
+ /locus_tag="SARI_04216"
+ /note="DNA binding residues [nucleotide binding]"
+ /db_xref="CDD:133398"
+ misc_feature order(4141744..4141746,4141753..4141755,4141765..4141770,
+ 4141795..4141797,4141831..4141836,4141843..4141845,
+ 4141852..4141854,4141864..4141866,4141882..4141884,
+ 4141894..4141896,4141903..4141908,4141927..4141929,
+ 4141942..4141947,4141966..4141968,4141972..4141974)
+ /gene="zntR"
+ /locus_tag="SARI_04216"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:133398"
+ misc_feature order(4141831..4141833,4141936..4141938,4141966..4141968)
+ /gene="zntR"
+ /locus_tag="SARI_04216"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:133398"
+ gene complement(4142285..4142698)
+ /gene="mscL"
+ /locus_tag="SARI_04217"
+ CDS complement(4142285..4142698)
+ /gene="mscL"
+ /locus_tag="SARI_04217"
+ /inference="protein motif:BlastProDom:IPR001185"
+ /inference="protein motif:HMMPfam:IPR001185"
+ /inference="protein motif:HMMTigr:IPR001185"
+ /inference="protein motif:ScanRegExp:IPR001185"
+ /inference="similar to AA sequence:INSD:AAV79093.1"
+ /note="forms homopentamer; channel that opens in response
+ to pressure or hypoosmotic shock"
+ /codon_start=1
+ /transl_table=11
+ /product="large-conductance mechanosensitive channel"
+ /protein_id="YP_001573148.1"
+ /db_xref="GI:161506036"
+ /db_xref="InterPro:IPR001185"
+ /translation="MSFIKEFREFAMRGNVVDLAVGVIIGAAFGKIVSSLVADIIMPP
+ LGLLIGGIDFKQFAFTLREAQGDIPAVVMHYGVFIQNVFDFVIVAFAIFVAIKLINRL
+ NRKKAEEPAAPPAPSKEEVLLGEIRDLLKEQNNRS"
+ misc_feature complement(4142300..4142698)
+ /gene="mscL"
+ /locus_tag="SARI_04217"
+ /note="Large-conductance mechanosensitive channel [Cell
+ envelope biogenesis, outer membrane]; Region: MscL;
+ COG1970"
+ /db_xref="CDD:224881"
+ misc_feature complement(4142288..4142692)
+ /gene="mscL"
+ /locus_tag="SARI_04217"
+ /note="large-conductance mechanosensitive channel;
+ Reviewed; Region: mscL; PRK00567"
+ /db_xref="CDD:234795"
+ gene complement(4142842..4144218)
+ /gene="trkA"
+ /locus_tag="SARI_04218"
+ CDS complement(4142842..4144218)
+ /gene="trkA"
+ /locus_tag="SARI_04218"
+ /inference="protein motif:HMMPfam:IPR003148"
+ /inference="protein motif:HMMPfam:IPR006037"
+ /inference="similar to AA sequence:INSD:AAV79092.1"
+ /note="involved in potassium uptake; found to be
+ peripherally associated with the inner membrane in
+ Escherichia coli; contains an NAD-binding domain"
+ /codon_start=1
+ /transl_table=11
+ /product="potassium transporter peripheral membrane
+ component"
+ /protein_id="YP_001573149.1"
+ /db_xref="GI:161506037"
+ /db_xref="InterPro:IPR003148"
+ /db_xref="InterPro:IPR006037"
+ /translation="MKIIILGAGQVGGTLAENLVGENNDITVVDTNGERLRSLQDKFD
+ LRVVQGHGSHPRVLREAGADDADMLVAVTSSDETNMVACQVAYSLFNTPNRIARIRSP
+ DYVRDADKLFHSEAVPIDHLIAPEQLVIDNIYRLIEYPGALQVVNFAEGKVSLAVVKA
+ YYGGPLIGNALSTMREHMPHIDTRVAAIFRHDRPIRPQGSTIVEAGDEVFFIAASQHI
+ RAVMSELQRLEKPYKRIMLVGGGNIGAGLARRLEKDYSVKLIERDQQRAAELAEKLQN
+ TIVFFGDASDQELLAEEHIDQVDLFIAVTNDDEANIMSAMLAKRMGAKKVMVLIQRRA
+ YVDLVQGSVIDIAISPQQATISALLSHVRKADIVGVSSLRRGVAEAIEAVAHGDESTS
+ RVVGRVIDEIKLPPGTIIGAVVRGNDVMIANDNLRIEQGDHVIMFLTDKKFITDVERL
+ FQPSPFFL"
+ misc_feature complement(4142851..4144218)
+ /gene="trkA"
+ /locus_tag="SARI_04218"
+ /note="potassium transporter peripheral membrane
+ component; Reviewed; Region: trkA; PRK09496"
+ /db_xref="CDD:236541"
+ misc_feature complement(4143844..4144212)
+ /gene="trkA"
+ /locus_tag="SARI_04218"
+ /note="TrkA-N domain; Region: TrkA_N; pfam02254"
+ /db_xref="CDD:216949"
+ misc_feature complement(4143541..4143756)
+ /gene="trkA"
+ /locus_tag="SARI_04218"
+ /note="TrkA-C domain; Region: TrkA_C; pfam02080"
+ /db_xref="CDD:216867"
+ misc_feature complement(4143169..4143516)
+ /gene="trkA"
+ /locus_tag="SARI_04218"
+ /note="TrkA-N domain; Region: TrkA_N; pfam02254"
+ /db_xref="CDD:216949"
+ misc_feature complement(4142863..4143054)
+ /gene="trkA"
+ /locus_tag="SARI_04218"
+ /note="TrkA-C domain; Region: TrkA_C; pfam02080"
+ /db_xref="CDD:216867"
+ gene complement(4144240..4145529)
+ /locus_tag="SARI_04219"
+ CDS complement(4144240..4145529)
+ /locus_tag="SARI_04219"
+ /inference="protein motif:BlastProDom:IPR006174"
+ /inference="protein motif:Gene3D:IPR006027"
+ /inference="protein motif:HMMPfam:IPR001678"
+ /inference="protein motif:HMMPfam:IPR006027"
+ /inference="protein motif:HMMTigr:IPR004573"
+ /inference="protein motif:ScanRegExp:IPR001678"
+ /inference="similar to AA sequence:SwissProt:Q8ZLM5"
+ /note="catalyzes the methylation of cytosine at position
+ 967 (m5C967) of 16S rRNA; SAM-dependent methyltransferase"
+ /codon_start=1
+ /transl_table=11
+ /product="16S rRNA methyltransferase B"
+ /protein_id="YP_001573150.1"
+ /db_xref="GI:161506038"
+ /db_xref="InterPro:IPR001678"
+ /db_xref="InterPro:IPR004573"
+ /db_xref="InterPro:IPR006027"
+ /db_xref="InterPro:IPR006174"
+ /translation="MKKQNNLRSLAAQAVEQVVEQGQSLSNVLPPLQQKVADKDKALL
+ QELCFGVLRTLSQLEWLINKLMSRPMTGKQRTVHYLIMVGFYQLLYTRVPPHAALAET
+ VEGAVSIKRPQLKGLINGVLRQFQRQQETLLNEFATSDARFLHPGWLVKRLQNAYPTQ
+ WQHIIEANNQRPPMWLRVNRTHHTRDGWLGLLEDAGMKGYPHPDYPDAVRLETPAPVH
+ ALPGFAEGWVTVQDASAQKCVAFLAPQNGEHILDLCAAPGGKTTHILEAAPEADVLAV
+ DVDEQRLSRIYDNLKRLGMKATVKQGDGRYPAQWCDEQQFDRILLDAPCSATGVIRRH
+ PDIKWLRRDRDIAELAKLQAEILDTVWPRLKPGGTLVYATCSVLPEENSAQINAFLQR
+ TPDAALSETGTPDQPGQQNLPGAEEGDGFFYAKLIKK"
+ misc_feature complement(4145143..4145517)
+ /locus_tag="SARI_04219"
+ /note="N-terminal RNA binding domain of the
+ methyltransferase Sun. The rRNA-specific 5-methylcytidine
+ transferase Sun, also known as RrmB or Fmu shares the
+ RNA-binding non-catalytic domain with the transcription
+ termination factor NusB. The precise biological...;
+ Region: Methyltransferase_Sun; cd00620"
+ /db_xref="CDD:238343"
+ misc_feature complement(4145506..4145517)
+ /locus_tag="SARI_04219"
+ /note="putative RNA binding site [nucleotide binding];
+ other site"
+ /db_xref="CDD:238343"
+ misc_feature complement(4144246..4145514)
+ /locus_tag="SARI_04219"
+ /note="16S rRNA methyltransferase B; Provisional; Region:
+ PRK10901"
+ /db_xref="CDD:236790"
+ misc_feature complement(4144414..4144782)
+ /locus_tag="SARI_04219"
+ /note="S-adenosylmethionine-dependent methyltransferases
+ (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
+ that use S-adenosyl-L-methionine (SAM or AdoMet) as a
+ substrate for methyltransfer, creating the product
+ S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
+ cd02440"
+ /db_xref="CDD:100107"
+ misc_feature complement(order(4144564..4144566,4144618..4144626,
+ 4144696..4144701,4144753..4144773))
+ /locus_tag="SARI_04219"
+ /note="S-adenosylmethionine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:100107"
+ gene complement(4145581..4146528)
+ /locus_tag="SARI_04220"
+ CDS complement(4145581..4146528)
+ /locus_tag="SARI_04220"
+ /inference="protein motif:Gene3D:IPR002376"
+ /inference="protein motif:HMMPfam:IPR002376"
+ /inference="protein motif:HMMPfam:IPR005793"
+ /inference="protein motif:HMMTigr:IPR005794"
+ /inference="protein motif:ScanRegExp:IPR001555"
+ /inference="protein motif:superfamily:IPR002376"
+ /inference="protein motif:superfamily:IPR011034"
+ /inference="similar to AA sequence:INSD:AAL22270.1"
+ /note="'KEGG: sec:SC3343 6.2e-139 fmt;
+ 10-formyltetrahydrofolate:L-meTHIonyl-tRNA(fMet)
+ N-formyltransferase K00604;
+ COG: COG0223 MeTHIonyl-tRNA formyltransferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573151.2"
+ /db_xref="GI:448236292"
+ /db_xref="InterPro:IPR001555"
+ /db_xref="InterPro:IPR002376"
+ /db_xref="InterPro:IPR005793"
+ /db_xref="InterPro:IPR005794"
+ /db_xref="InterPro:IPR011034"
+ /translation="MSDSLRIIFAGTPDFAARHLDALLTSGHNVVGVFTQPDRPAGRG
+ KKLMPSPVKVMAEEKGLPVFQPVSLRPQENQHLVADLHADVMVVVAYGLILPKAVLDM
+ PRLGCINVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLACPIT
+ AEDTSGSLYNKLAELGPQGLITTLKQLADGTATPEAQNEALVTHAEKLSKEEARIDWS
+ LSAAQLERCIRAFNPWPMSWLEIDGQPVKVWQASVIEGATQSPPGTILAATKQGIQVA
+ TGKGILNLLSLQPAGKKAMSAHDLLNSRREWFIPGNRLA"
+ misc_feature complement(4145584..4146516)
+ /locus_tag="SARI_04220"
+ /note="methionyl-tRNA formyltransferase; Reviewed; Region:
+ fmt; PRK00005"
+ /db_xref="CDD:234567"
+ misc_feature complement(4145905..4146516)
+ /locus_tag="SARI_04220"
+ /note="Methionyl-tRNA formyltransferase, N-terminal
+ hydrolase domain; Region: FMT_core_Met-tRNA-FMT_N;
+ cd08646"
+ /db_xref="CDD:187715"
+ misc_feature complement(order(4146088..4146093,4146100..4146105,
+ 4146109..4146111,4146169..4146171,4146193..4146204,
+ 4146229..4146231,4146244..4146267,4146481..4146486,
+ 4146496..4146498))
+ /locus_tag="SARI_04220"
+ /note="putative active site [active]"
+ /db_xref="CDD:187715"
+ misc_feature complement(order(4145908..4145910,4146163..4146171,
+ 4146193..4146198,4146202..4146204,4146253..4146264,
+ 4146394..4146405,4146409..4146411,4146421..4146423,
+ 4146484..4146486,4146490..4146495))
+ /locus_tag="SARI_04220"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:187715"
+ misc_feature complement(order(4146088..4146093,4146100..4146105,
+ 4146202..4146204,4146229..4146231,4146244..4146252,
+ 4146256..4146258,4146265..4146267))
+ /locus_tag="SARI_04220"
+ /note="putative cosubstrate binding site; other site"
+ /db_xref="CDD:187715"
+ misc_feature complement(order(4146088..4146090,4146196..4146198,
+ 4146202..4146204))
+ /locus_tag="SARI_04220"
+ /note="catalytic site [active]"
+ /db_xref="CDD:187715"
+ misc_feature complement(4145638..4145898)
+ /locus_tag="SARI_04220"
+ /note="C-terminal domain of Formyltransferase and other
+ enzymes; Region: Met_tRNA_FMT_C; cd08704"
+ /db_xref="CDD:187732"
+ misc_feature complement(order(4145644..4145646,4145650..4145655,
+ 4145659..4145661,4145665..4145667,4145788..4145790,
+ 4145794..4145796,4145827..4145829))
+ /locus_tag="SARI_04220"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:187732"
+ gene complement(4146544..4147053)
+ /gene="def"
+ /locus_tag="SARI_04221"
+ CDS complement(4146544..4147053)
+ /gene="def"
+ /locus_tag="SARI_04221"
+ /inference="protein motif:BlastProDom:IPR000181"
+ /inference="protein motif:Gene3D:IPR000181"
+ /inference="protein motif:HMMPanther:IPR000181"
+ /inference="protein motif:HMMPfam:IPR000181"
+ /inference="protein motif:HMMPIR:IPR000181"
+ /inference="protein motif:HMMTigr:IPR000181"
+ /inference="protein motif:superfamily:IPR000181"
+ /inference="similar to AA sequence:REFSEQ:YP_152401.1"
+ /note="cleaves off formyl group from N-terminal methionine
+ residues of newly synthesized proteins; binds iron(2+)"
+ /codon_start=1
+ /transl_table=11
+ /product="peptide deformylase"
+ /protein_id="YP_001573152.1"
+ /db_xref="GI:161506040"
+ /db_xref="InterPro:IPR000181"
+ /translation="MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEG
+ IGLAATQVDIHQRIIVIDVSENRNERLVLINPELLEKSGETGIEEGCLSIPEQRALVP
+ RAEKVKIRALDRDGNPFELEADGLLAICIQHEMDHLVGKLFIDYLSPLKQQRIRQKVE
+ KLDRLNARA"
+ misc_feature complement(4146625..4147038)
+ /gene="def"
+ /locus_tag="SARI_04221"
+ /note="Polypeptide or peptide deformylase; a family of
+ metalloenzymes that catalyzes the removal of the
+ N-terminal formyl group in a growing polypeptide chain
+ following translation initiation during protein synthesis
+ in prokaryotes. These enzymes utilize Fe(II)...; Region:
+ Pep_deformylase; cd00487"
+ /db_xref="CDD:238271"
+ misc_feature complement(order(4146643..4146645,4146652..4146657,
+ 4146778..4146786,4146901..4146903,4146916..4146924))
+ /gene="def"
+ /locus_tag="SARI_04221"
+ /note="active site"
+ /db_xref="CDD:238271"
+ misc_feature complement(order(4146652..4146654,4146778..4146780,
+ 4146901..4146903,4146916..4146918))
+ /gene="def"
+ /locus_tag="SARI_04221"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:238271"
+ misc_feature complement(order(4146643..4146645,4146655..4146657,
+ 4146781..4146783))
+ /gene="def"
+ /locus_tag="SARI_04221"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:238271"
+ gene 4147215..4148309
+ /locus_tag="SARI_04222"
+ CDS 4147215..4148309
+ /locus_tag="SARI_04222"
+ /inference="protein motif:HMMPfam:IPR003488"
+ /inference="protein motif:HMMTigr:IPR003488"
+ /inference="similar to AA sequence:REFSEQ:YP_218328.1"
+ /note="'COG: COG0758 Predicted Rossmann fold
+ nucleotide-binding protein involved in DNA uptake;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA protecting protein DprA"
+ /protein_id="YP_001573153.1"
+ /db_xref="GI:161506041"
+ /db_xref="InterPro:IPR003488"
+ /translation="MYVGDLYGEAMLNMANSLICQPQINRAHLQDAGLTARQAERFLQ
+ LPVSVLEETLRWLELPQHHFLCADSEIYPPQLRAIDDYPGAIFIDGDPACLHTCQLAV
+ VGSRTHSWYGQRWGRLLCESLAQSGLTITSGLARGIDGVAHNAALSIGGKSVAVLGNG
+ LAKIYPRRHATLAENLIAAGGAVVSEFLLSTPPLPQNFPRRNRIISGLSKGVLVVEAA
+ LHSGSLVTARCALEQGRDVFALPGPIGSPGSEGTHWLIKQGATLVTTPEDILENLQYG
+ LYWLPTTEENSLYSLNQDEVALPFPELLANVGDEVTPVDVVAERAGQPVPAVVAQLLE
+ LELAGWIAAVPGGYVRLRRASHVRRTNVFV"
+ misc_feature 4147215..4148306
+ /locus_tag="SARI_04222"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10736"
+ /db_xref="CDD:236747"
+ misc_feature 4147374..4148033
+ /locus_tag="SARI_04222"
+ /note="DNA protecting protein DprA; Region: dprA;
+ TIGR00732"
+ /db_xref="CDD:129815"
+ gene 4148296..4148754
+ /locus_tag="SARI_04223"
+ CDS 4148296..4148754
+ /locus_tag="SARI_04223"
+ /inference="protein motif:HMMPfam:IPR007456"
+ /inference="similar to AA sequence:INSD:AAV79087.1"
+ /note="'COG: COG2922 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573154.1"
+ /db_xref="GI:161506042"
+ /db_xref="InterPro:IPR007456"
+ /translation="MYLFETYIHNEAELRVDQDRLERDLTDAGFDREDIYNALLWLEK
+ LADYQDGLAEPMQLASDPLSMRIYTVEECVRLDACCRGFLLFLEQIQVLNLETREMVI
+ ERVLALDTAEFDLEDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH"
+ misc_feature 4148296..4148751
+ /locus_tag="SARI_04223"
+ /note="hypothetical protein; Validated; Region: PRK03430"
+ /db_xref="CDD:235125"
+ gene 4148775..4149338
+ /locus_tag="SARI_04224"
+ CDS 4148775..4149338
+ /locus_tag="SARI_04224"
+ /inference="protein motif:HMMPfam:IPR013498"
+ /inference="similar to AA sequence:INSD:AAL22266.1"
+ /note="'KEGG: cvi:CV4269 1.8e-43 topA; DNA topoisomerase
+ K03168;
+ COG: COG0551 Zn-finger domain associated with
+ topoisomerase type I;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573155.1"
+ /db_xref="GI:161506043"
+ /db_xref="InterPro:IPR013498"
+ /translation="MNMAKLALFSVRKNEPCPQCGAELVIRSGKHGPFLGCARYPECE
+ YVRPLKSSADGHIVKVLEGKLCPNCGAALVLRQGRFGMFIGCSEYPACEHTELIDKPD
+ ETAIVCPQCQKGHLVQRRSRYGKTFHSCDRYPECQFAINYKPIAGECPECHYPLLIEK
+ KTAQGVKRFCASKQCGKPVPAEQTSEQ"
+ misc_feature 4148823..4148930
+ /locus_tag="SARI_04224"
+ /note="Topoisomerase DNA binding C4 zinc finger; Region:
+ zf-C4_Topoisom; pfam01396"
+ /db_xref="CDD:110400"
+ misc_feature 4148931..4149320
+ /locus_tag="SARI_04224"
+ /note="Zn-finger domain associated with topoisomerase type
+ I [DNA replication, recombination, and repair]; Region:
+ TopA; COG0551"
+ /db_xref="CDD:223625"
+ misc_feature 4148961..4149074
+ /locus_tag="SARI_04224"
+ /note="Topoisomerase DNA binding C4 zinc finger; Region:
+ zf-C4_Topoisom; pfam01396"
+ /db_xref="CDD:110400"
+ misc_feature 4149096..4149209
+ /locus_tag="SARI_04224"
+ /note="Topoisomerase DNA binding C4 zinc finger; Region:
+ zf-C4_Topoisom; pfam01396"
+ /db_xref="CDD:110400"
+ gene 4149298..4149900
+ /locus_tag="SARI_04225"
+ CDS 4149298..4149900
+ /locus_tag="SARI_04225"
+ /inference="protein motif:HMMPfam:IPR006070"
+ /inference="protein motif:HMMPIR:IPR012200"
+ /inference="similar to AA sequence:REFSEQ:YP_218325.1"
+ /note="RimN; YrdC; required for maturation of 16s RNA;
+ binds preferentially double stranded RNA"
+ /codon_start=1
+ /transl_table=11
+ /product="putative ribosome maturation factor"
+ /protein_id="YP_001573156.1"
+ /db_xref="GI:161506044"
+ /db_xref="InterPro:IPR006070"
+ /db_xref="InterPro:IPR012200"
+ /translation="MESRFRRNKQVNNNLPTGSIAAAVDLLNKENVIAYPTEAVFGVG
+ CDPDSETAVTRLLELKQRPVDKGLILIAASFEQLKPYIDDSILTTAQRKAVFDCWPGP
+ VTFVFPASATTPRWLTGRFDSLAVRVTDHPLVVALCNAYGKPLVSTSANLSGLPPCRT
+ VEEVRAQFGDDFPMVEGATGGRLNPSEIRDALTGELFRQG"
+ misc_feature 4149328..4149897
+ /locus_tag="SARI_04225"
+ /note="tRNA(ANN) t(6)A37 threonylcarbamoyladenosine
+ modification protein; Provisional; Region: PRK10634"
+ /db_xref="CDD:182603"
+ gene 4149902..4150723
+ /gene="aroE"
+ /locus_tag="SARI_04226"
+ CDS 4149902..4150723
+ /gene="aroE"
+ /locus_tag="SARI_04226"
+ /inference="protein motif:HMMPfam:IPR006151"
+ /inference="protein motif:HMMPfam:IPR013708"
+ /inference="protein motif:HMMTigr:IPR011342"
+ /inference="similar to AA sequence:REFSEQ:YP_218324.1"
+ /note="AroE; catalyzes the conversion of shikimate to
+ 3-dehydroshikimate"
+ /codon_start=1
+ /transl_table=11
+ /product="shikimate 5-dehydrogenase"
+ /protein_id="YP_001573157.1"
+ /db_xref="GI:161506045"
+ /db_xref="InterPro:IPR006151"
+ /db_xref="InterPro:IPR011342"
+ /db_xref="InterPro:IPR013708"
+ /translation="MMETYAVFGNPIAHSKSPFIHQQFAQQLNIVHPYGRVLAPINDF
+ INTLNAFFAAGGKGANVTVPFKEEAFARSDELTERASLAGAVNTLKRLEDGRLLGDNT
+ DGIGLLSDLKRLNFIRPGWRILLIGAGGASRGVLLPLLSLDCAVTITNRTASRAEALA
+ KIFAHTASVHAMDMDKLDGCEFDLIINATSSGIRGEIPAIPASLIHPSLCCYDMFYQK
+ GNTPFLSWCVQQGAKRYADGLGMLVGQAAHAVLLWHGVLPQVEPVIKLLQQELLA"
+ misc_feature 4149902..4150714
+ /gene="aroE"
+ /locus_tag="SARI_04226"
+ /note="shikimate 5-dehydrogenase; Reviewed; Region: aroE;
+ PRK00258"
+ /db_xref="CDD:234703"
+ misc_feature 4149920..4150168
+ /gene="aroE"
+ /locus_tag="SARI_04226"
+ /note="Shikimate dehydrogenase substrate binding domain;
+ Region: Shikimate_dh_N; pfam08501"
+ /db_xref="CDD:149523"
+ misc_feature 4150205..4150666
+ /gene="aroE"
+ /locus_tag="SARI_04226"
+ /note="NAD(P) binding domain of Shikimate dehydrogenase;
+ Region: NAD_bind_Shikimate_DH; cd01065"
+ /db_xref="CDD:133443"
+ misc_feature order(4150208..4150210,4150547..4150549,4150625..4150627,
+ 4150634..4150636)
+ /gene="aroE"
+ /locus_tag="SARI_04226"
+ /note="shikimate binding site; other site"
+ /db_xref="CDD:133443"
+ misc_feature order(4150283..4150285,4150292..4150294,4150349..4150354,
+ 4150463..4150471,4150541..4150543,4150613..4150615,
+ 4150622..4150627)
+ /gene="aroE"
+ /locus_tag="SARI_04226"
+ /note="NAD(P) binding site [chemical binding]; other site"
+ /db_xref="CDD:133443"
+ unsure 4150715..4150794
+ /note="Sequence derived from one plasmid subclone"
+ gene 4150720..4150977
+ /locus_tag="SARI_04227"
+ CDS 4150720..4150977
+ /locus_tag="SARI_04227"
+ /inference="protein motif:HMMPfam:IPR009962"
+ /inference="similar to AA sequence:INSD:AAV79083.1"
+ /note="'COG: NOG13911 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573158.1"
+ /db_xref="GI:161506046"
+ /db_xref="InterPro:IPR009962"
+ /translation="MNQAIQFPDREEWDTAANAIIFPALVNGMQLTCAIKKDVLAYRF
+ GGETAEQWLAIFREYRWDLEEEAEALILAQQEDDHGWIWLS"
+ misc_feature 4150729..4150974
+ /locus_tag="SARI_04227"
+ /note="Protein of unknown function (DUF1488); Region:
+ DUF1488; pfam07369"
+ /db_xref="CDD:191733"
+ gene complement(4150953..4151507)
+ /locus_tag="SARI_04228"
+ CDS complement(4150953..4151507)
+ /locus_tag="SARI_04228"
+ /inference="protein motif:superfamily:IPR011004"
+ /inference="similar to AA sequence:INSD:CAD09186.1"
+ /note="'KEGG: eci:UTI89_C3724 5.4e-85 yrdA; protein YrdA
+ K00680;
+ COG: COG0663 Carbonic anhydrases/acetyltransferases,
+ isoleucine patch superfamily;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573159.1"
+ /db_xref="GI:161506047"
+ /db_xref="InterPro:IPR011004"
+ /translation="MSDTLRPYKDLFPEIGQRVMIDTSSVVIGDVRLADDVGIWPLVV
+ IRGDVNYVAIGARTNIQDGSVLHVTHKSPSNPHGNPLIIGEDVTVGHKVMLHGCTIGN
+ RVLVGMGSIVLDGAIIEDDVMIGAGSLVPQHKRLESGYLYLGSPVKQIRPLSDAERLG
+ LQYSANNYVKWKDEYLSQDNHIQP"
+ misc_feature complement(4150956..4151504)
+ /locus_tag="SARI_04228"
+ /note="Carbonic anhydrases/acetyltransferases, isoleucine
+ patch superfamily [General function prediction only];
+ Region: PaaY; COG0663"
+ /db_xref="CDD:223735"
+ misc_feature complement(4150989..4151468)
+ /locus_tag="SARI_04228"
+ /note="Gamma carbonic anhydrase-like: This family is
+ composed of gamma carbonic anhydrase (CA), Ferripyochelin
+ Binding Protein (FBP), E. coli paaY protein, and similar
+ proteins. CAs are zinc-containing enzymes that catalyze
+ the reversible hydration of carbon...; Region:
+ LbH_gamma_CA_like; cd04645"
+ /db_xref="CDD:100051"
+ misc_feature complement(order(4151184..4151186,4151220..4151222,
+ 4151226..4151237,4151307..4151309,4151319..4151324,
+ 4151364..4151366,4151370..4151372,4151376..4151381,
+ 4151388..4151390,4151424..4151426,4151433..4151438,
+ 4151442..4151444,4151448..4151450))
+ /locus_tag="SARI_04228"
+ /note="trimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:100051"
+ misc_feature complement(order(4151220..4151222,4151235..4151237,
+ 4151307..4151309))
+ /locus_tag="SARI_04228"
+ /note="putative metal binding site [ion binding]; other
+ site"
+ /db_xref="CDD:100051"
+ gene 4151981..4153527
+ /locus_tag="SARI_04229"
+ rRNA 4151981..4153527
+ /locus_tag="SARI_04229"
+ /product="16S ribosomal RNA"
+ /inference="nucleotide motif:Rfam:RF00177"
+ /note="Rfam score 355.33;
+ 5 domain"
+ gene 4153591..4153664
+ /locus_tag="SARI_04230"
+ tRNA 4153591..4153664
+ /locus_tag="SARI_04230"
+ /product="tRNA-Ile"
+ gene 4153777..4153849
+ /locus_tag="SARI_04231"
+ tRNA 4153777..4153849
+ /locus_tag="SARI_04231"
+ /product="tRNA-Ala"
+ gene 4154026..4157026
+ /locus_tag="SARI_04704"
+ rRNA 4154026..4157026
+ /locus_tag="SARI_04704"
+ /product="23S ribosomal RNA"
+ gene 4157028..4157183
+ /locus_tag="SARI_04233"
+ CDS 4157028..4157183
+ /locus_tag="SARI_04233"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573161.1"
+ /db_xref="GI:161506049"
+ /translation="MFWRIERIFSIDNRFSGTKDFTLRQGGKRRKGRSILKYVTDFTS
+ AANAASV"
+ gene 4157211..4157326
+ /locus_tag="SARI_04234"
+ rRNA 4157211..4157326
+ /locus_tag="SARI_04234"
+ /product="5S ribosomal RNA"
+ /inference="nucleotide motif:Rfam:RF00001"
+ /note="Rfam score 84.4"
+ gene 4157341..4157413
+ /locus_tag="SARI_04235"
+ tRNA 4157341..4157413
+ /locus_tag="SARI_04235"
+ /product="tRNA-Thr"
+ gene 4157456..4157571
+ /locus_tag="SARI_04236"
+ rRNA 4157456..4157571
+ /locus_tag="SARI_04236"
+ /product="5S ribosomal RNA"
+ /inference="nucleotide motif:Rfam:RF00001"
+ /note="Rfam score 84.4"
+ gene 4158418..4158597
+ /locus_tag="SARI_04237"
+ CDS 4158418..4158597
+ /locus_tag="SARI_04237"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573162.1"
+ /db_xref="GI:161506050"
+ /translation="MWIVKTMENIDISGEGRITELKTYRLKKASEDASVYRLIMMAIK
+ SAFYNNKEYWHEEDS"
+ gene complement(4158529..4161642)
+ /locus_tag="SARI_04238"
+ CDS complement(4158529..4161642)
+ /locus_tag="SARI_04238"
+ /inference="protein motif:HMMPfam:IPR001036"
+ /inference="protein motif:HMMTigr:IPR004764"
+ /note="'KEGG: eci:UTI89_C2351 3.8e-107 yegO; hypothetical
+ protein YegO K07789;
+ COG: COG0841 Cation/multidrug efflux pump;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573163.1"
+ /db_xref="GI:161506051"
+ /db_xref="InterPro:IPR001036"
+ /db_xref="InterPro:IPR004764"
+ /translation="MANFFIRRPIFAWVLAIILMMAGALAIMQLPVAQYPTIAPPAVS
+ ISATYPGADAQTVQDTVTQVIEQNMNGIDNLMYMSSTSDSAGSVTITLTFQSGTDPDI
+ AQVQVQNKLQLATPLLPQEVQQQGISVEKSSSSFLMVAGFISDNPNTTQDDISDYVAS
+ NIKDSISRLNGVGDVQLFGAQYAMRIWLDANLLNKYQLTPVDVISQLKVQNDQIAAGQ
+ LGGTPALPGQQLNASIIAQTRLKDPQEFGKVTLRVNTNGSVVHLKDVARIELGGENYN
+ VVARINGKPASGLGIKLATGANALDTATAIKAKLAELQPFFPQGMQVVYPYDTTPFVK
+ ISIHEVVKTLFEAIILVFLVMYLFLQNIRATLIPTIAVPVVLLGTFAVLAAFGYSINT
+ LTMFGMVLAIGLLVDDAIVVVENVERVMMEDNLSPREATEKSMSQIQGALVGIAMVLS
+ AVFIPMAFFGGSTGAIYRQFSITIVSAMALSVLVALILTPALCATLLKPVSAEHHEKK
+ SGFFGWFNTKFDHSVNHYTNSVSGIVRNTGRYLIIYLLIVVGMAVLFLRLPTSFLPEE
+ DQGVFLTMIQLPSGATQERTQKVLDQVTHYYLNNEKANVESVFTVNGFSFSGQGQNSG
+ MAFVSLKPWEERNGEENSVEAVIARATRAFSQIRDGLVFPFNMPAIVELGTATGFDFE
+ LIDQGGLGHDALTKARNQLLGMVAKHPDLLVRVRPNGLEDTPQFKLDVDQEKAQALGV
+ SLSDINETISAALGGYYVNDFIDRGRVKKVYVQADAQFRMLPEDINNLYVRSANGEMV
+ PFSTFSSARWIYGSPRLERYNGMPSMELLGEAAPGRSTGEAMALMENLASRLPNGIGY
+ DWTGMSYQERLSGNQAPALYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVVGALLA
+ ASLRGLNNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMEKEGRGLIEATLEASRMRLR
+ PILMTSLAFILGVMPLVISRGAGSGAQNAVGTGVMGGMLTATLLAIFFVPVFFVVVKR
+ RFNRHHD"
+ misc_feature complement(4158532..4161642)
+ /locus_tag="SARI_04238"
+ /note="multidrug efflux system protein AcrB; Provisional;
+ Region: PRK15127"
+ /db_xref="CDD:185081"
+ gene complement(4161654..4162811)
+ /locus_tag="SARI_04239"
+ CDS complement(4161654..4162811)
+ /locus_tag="SARI_04239"
+ /inference="protein motif:HMMPfam:IPR006143"
+ /inference="protein motif:HMMTigr:IPR006143"
+ /inference="similar to AA sequence:INSD:AAV79079.1"
+ /note="'COG: COG0845 Membrane-fusion protein;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573164.1"
+ /db_xref="GI:161506052"
+ /db_xref="InterPro:IPR006143"
+ /translation="MTKHARFSLLPSFIIFSAALLAGCNDQGDTQAHPGEPQVTIDVV
+ ETAPLAVTTELPGRTSAFRIAEVRPQVSGIVLKRNFTEGSDVEAGQSLYQIDPATYQA
+ DYDSAKGELAKSEAAAAIAHLTVKRYVPLVGTKYISQQEYDQAIADARQSDAAVVAAK
+ AAVESARINLAYTKVTSPISGRIGKSNVTEGALVTNGQSTELATVQQLDPIYVDVTQS
+ SNDFMRLRQSVEQGSLHKDSASSTVELVMENGQVYPLKGTLQFSDVTVDESTGSITLR
+ AVFPNPQHSLLPGMFVRARIDEGVQPNAILVPQQGVTRTPRGDAMVMVVNDKSQVEAR
+ NVVAAQAIGDKWLISEGLKPGDKVIVSGLQKARPGVKVKATTDAPTTKKAQ"
+ misc_feature complement(4161702..4162811)
+ /locus_tag="SARI_04239"
+ /note="multidrug efflux system transporter AcrA;
+ Provisional; Region: PRK15030"
+ /db_xref="CDD:184990"
+ misc_feature complement(4162497..4162616)
+ /locus_tag="SARI_04239"
+ /note="Biotin-lipoyl like; Region: Biotin_lipoyl_2;
+ pfam13533"
+ /db_xref="CDD:205711"
+ misc_feature complement(4161945..4162292)
+ /locus_tag="SARI_04239"
+ /note="HlyD family secretion protein; Region: HlyD_3;
+ pfam13437"
+ /db_xref="CDD:222128"
+ gene 4163201..4163884
+ /locus_tag="SARI_04240"
+ CDS 4163201..4163884
+ /locus_tag="SARI_04240"
+ /inference="protein motif:FPrintScan:IPR001647"
+ /inference="protein motif:Gene3D:IPR012287"
+ /inference="protein motif:HMMPfam:IPR001647"
+ /inference="protein motif:HMMPfam:IPR013572"
+ /inference="protein motif:ScanRegExp:IPR001647"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:INSD:AAL22258.1"
+ /note="'COG: COG1309 Transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional regulator EnvR"
+ /protein_id="YP_001573165.1"
+ /db_xref="GI:161506053"
+ /db_xref="InterPro:IPR001647"
+ /db_xref="InterPro:IPR009057"
+ /db_xref="InterPro:IPR012287"
+ /db_xref="InterPro:IPR013572"
+ /translation="MVQDSLIMAKKTKADALKTRQHLIETAIVQFALRGVANTTLNDI
+ ADAAEVTRGAIYWHFENKTQLFNEVWLQQPPLRELIQDRLTGCWNDNPLQDLRERLIA
+ ALQYIAAVPRQQALMQILYHKCEFHNGMISEQTIREKIGFHHQTLLEVLQRCMDKKLI
+ SGSLDLDVILIILHGSFSGIVKNWLMSPASYDLYKQAPALVDNVLKMLSPTGGVTQLV
+ SNEYQAEQA"
+ misc_feature 4163222..4163860
+ /locus_tag="SARI_04240"
+ /note="DNA-binding transcriptional regulator EnvR;
+ Provisional; Region: PRK09975"
+ /db_xref="CDD:182177"
+ misc_feature 4163267..4163407
+ /locus_tag="SARI_04240"
+ /note="Bacterial regulatory proteins, tetR family; Region:
+ TetR_N; pfam00440"
+ /db_xref="CDD:201228"
+ misc_feature 4163471..4163824
+ /locus_tag="SARI_04240"
+ /note="MAATS-type transcriptional repressor, C-terminal
+ region; Region: TetR_C_2; pfam08361"
+ /db_xref="CDD:116942"
+ gene complement(4163903..4164145)
+ /locus_tag="SARI_04241"
+ CDS complement(4163903..4164145)
+ /locus_tag="SARI_04241"
+ /inference="protein motif:HMMPfam:IPR001633"
+ /inference="similar to AA sequence:REFSEQ:NP_462298.1"
+ /note="'KEGG: shn:Shewana3_3829 0.00012 diguanylate
+ cyclase/phosphodiesterase with PAS/PAC sensor(s) K01745;
+ COG: COG2199 FOG: GGDEF domain;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573166.1"
+ /db_xref="GI:161506054"
+ /db_xref="InterPro:IPR001633"
+ /translation="MNELSEAGDGATIVAAIVAQAKALNLQIVAKGVENETQQQFLTQ
+ LGCHKLQRFFVWQTAHCSENCSRYSRSHQYICQINI"
+ misc_feature complement(4163984..>4164139)
+ /locus_tag="SARI_04241"
+ /note="EAL domain. This domain is found in diverse
+ bacterial signaling proteins. It is called EAL after its
+ conserved residues and is also known as domain of unknown
+ function 2 (DUF2). The EAL domain has been shown to
+ stimulate degradation of a second...; Region: EAL;
+ cl00290"
+ /db_xref="CDD:241757"
+ gene complement(4164142..4164579)
+ /locus_tag="SARI_04242"
+ CDS complement(4164142..4164579)
+ /locus_tag="SARI_04242"
+ /inference="protein motif:HMMPfam:IPR005330"
+ /inference="similar to AA sequence:REFSEQ:NP_462298.1"
+ /note="'KEGG: syn:slr2098 4.8e-13 hik21; two-component
+ hybrid histidine kinase K07678;
+ COG: COG2199 FOG: GGDEF domain;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573167.1"
+ /db_xref="GI:161506055"
+ /db_xref="InterPro:IPR005330"
+ /translation="MPVSEYNHILVAVLFAVAIFPSYTAFNMAGRFAGSARMSAWIWL
+ IGGGFALGVCILAMHFVGMLVMDHAINIRFDPFLTGFSMPIALDSPLFALWLISAEKL
+ RLRRLLPGVLVMRPGISAMHYTGMAALQFASLIVWNNAWIALS"
+ misc_feature complement(<4164145..4164579)
+ /locus_tag="SARI_04242"
+ /note="MHYT domain (predicted integral membrane sensor
+ domain) [Signal transduction mechanisms]; Region: COG3300"
+ /db_xref="CDD:225837"
+ gene complement(4164729..4164914)
+ /locus_tag="SARI_04243"
+ CDS complement(4164729..4164914)
+ /locus_tag="SARI_04243"
+ /inference="similar to AA sequence:REFSEQ:YP_152388.1"
+ /note="'COG: NOG13902 non supervised orthologous group;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573168.1"
+ /db_xref="GI:161506056"
+ /translation="MNTQDLTMIRKYWWLVVFAVSVFLFDALLMQWIELMATEQDKCR
+ NMDSVNPLKLINCTDLE"
+ misc_feature complement(4164735..4164893)
+ /locus_tag="SARI_04243"
+ /note="Protein of unknown function (DUF2556); Region:
+ DUF2556; pfam10831"
+ /db_xref="CDD:151280"
+ gene complement(4164980..4165864)
+ /locus_tag="SARI_04244"
+ CDS complement(4164980..4165864)
+ /locus_tag="SARI_04244"
+ /inference="protein motif:FPrintScan:IPR001091"
+ /inference="protein motif:FPrintScan:IPR002295"
+ /inference="protein motif:HMMPfam:IPR002941"
+ /inference="protein motif:ScanRegExp:IPR002052"
+ /inference="similar to AA sequence:INSD:AAO70836.1"
+ /note="'KEGG: sty:STY3566 1.6e-149 yhdJ; putative
+ adenine-specific DNA-modification methylase K07319;
+ COG: COG0863 DNA modification methylase;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative methyltransferase"
+ /protein_id="YP_001573169.1"
+ /db_xref="GI:161506057"
+ /db_xref="InterPro:IPR001091"
+ /db_xref="InterPro:IPR002052"
+ /db_xref="InterPro:IPR002295"
+ /db_xref="InterPro:IPR002941"
+ /translation="MKAECEPQYFGDESKKIILGDALTELKKLPSESIDLIFADPPYN
+ IGKDFDGMVESWDEASFLAWLYECVDECYRVLKKHGTMYIMNSTENMPYIDLKCRTLF
+ TIKSRIVWSYDSSGVQAKKYFGSMYEPILMMVKDSKTYTFNRDAILVETTTGAKRALI
+ DYRKNPPQPYNQKKVPGNVWSFPRVRYLMDEYENHPTQKPSALLKRIILASSNLGDTV
+ LDPFAGSFTTGAVAAASGRKFIGIEINNEYVKIGLRRLSVTSHYSENDLAKVKKRKTK
+ NRSKKQRNAVINARSSEK"
+ misc_feature complement(4165061..4165864)
+ /locus_tag="SARI_04244"
+ /note="DNA modification methylase [DNA replication,
+ recombination, and repair]; Region: COG0863"
+ /db_xref="CDD:223931"
+ misc_feature complement(4165610..>4165819)
+ /locus_tag="SARI_04244"
+ /note="S-adenosylmethionine-dependent methyltransferases
+ (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
+ that use S-adenosyl-L-methionine (SAM or AdoMet) as a
+ substrate for methyltransfer, creating the product
+ S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
+ cd02440"
+ /db_xref="CDD:100107"
+ misc_feature complement(4165112..4165765)
+ /locus_tag="SARI_04244"
+ /note="DNA methylase; Region: N6_N4_Mtase; pfam01555"
+ /db_xref="CDD:216568"
+ gene complement(4165950..4166246)
+ /gene="fis"
+ /locus_tag="SARI_04245"
+ CDS complement(4165950..4166246)
+ /gene="fis"
+ /locus_tag="SARI_04245"
+ /inference="protein motif:HMMPfam:IPR002197"
+ /inference="protein motif:HMMPIR:IPR005412"
+ /inference="protein motif:superfamily:IPR008931"
+ /inference="similar to AA sequence:INSD:EAY48030.1"
+ /note="Stimulates excision of phage lambda; affects Mu
+ development; acts as an activator of rRNA and iRNA
+ transcription"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding protein Fis"
+ /protein_id="YP_001573170.1"
+ /db_xref="GI:161506058"
+ /db_xref="InterPro:IPR002197"
+ /db_xref="InterPro:IPR005412"
+ /db_xref="InterPro:IPR008931"
+ /translation="MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNG
+ QDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN"
+ misc_feature complement(4165953..4166246)
+ /gene="fis"
+ /locus_tag="SARI_04245"
+ /note="Factor for inversion stimulation Fis,
+ transcriptional activator [Transcription / DNA
+ replication, recombination, and repair]; Region: Fis;
+ COG2901"
+ /db_xref="CDD:225454"
+ misc_feature complement(4165953..4166237)
+ /gene="fis"
+ /locus_tag="SARI_04245"
+ /note="global DNA-binding transcriptional dual regulator
+ Fis; Provisional; Region: fis; PRK00430"
+ /db_xref="CDD:179020"
+ gene complement(4166272..4167237)
+ /locus_tag="SARI_04246"
+ CDS complement(4166272..4167237)
+ /locus_tag="SARI_04246"
+ /inference="protein motif:HMMPfam:IPR001269"
+ /inference="protein motif:HMMPIR:IPR001269"
+ /inference="protein motif:HMMTigr:IPR004652"
+ /inference="protein motif:ScanRegExp:IPR001269"
+ /inference="similar to AA sequence:INSD:AAL22253.1"
+ /note="'KEGG: sec:SC3322 8.2e-169 yhdG, nifR3; putative
+ TIM-barrel enzyme, possibly dehydrogenase K05540;
+ COG: COG0042 tRNA-dihydrouridine synthase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="tRNA-dihydrouridine synthase B"
+ /protein_id="YP_001573171.1"
+ /db_xref="GI:161506059"
+ /db_xref="InterPro:IPR001269"
+ /db_xref="InterPro:IPR004652"
+ /translation="MRIGQYQLRNRLIAAPMAGITDRPFRTLCYEMGAGLTVSEMMSS
+ NPQVWESDKSRLRMVHVDEPGIRTVQIAGGSPVEMADAARINVESGAQIIDINMGCPA
+ KKVNRKLAGSALLQYPDLVKSILVGVVNAVDVPVTLKIRTGWAPEHRNCVEIAQLAED
+ CGIQALTIHGRTRACLFNGDAEYDSIRAVKQEVSIPIIANGDITNPHKARAVLDYTGA
+ DALMIGRAAQGRPWIFREIQHYLDTGELLPPLPLAEVKRLLCAHVRELHDFYGQAKGY
+ RIARKHVSWYLQEHAPNDQFRRTFNAIEDASEQLEALEAYFENFA"
+ misc_feature complement(4166275..4167237)
+ /locus_tag="SARI_04246"
+ /note="tRNA-dihydrouridine synthase B; Provisional;
+ Region: PRK10415"
+ /db_xref="CDD:182440"
+ misc_feature complement(4166512..4167207)
+ /locus_tag="SARI_04246"
+ /note="Dihydrouridine synthase-like (DUS-like) FMN-binding
+ domain. Members of this family catalyze the reduction of
+ the 5,6-double bond of a uridine residue on tRNA.
+ Dihydrouridine modification of tRNA is widely observed in
+ prokaryotes and eukaryotes, and also...; Region:
+ DUS_like_FMN; cd02801"
+ /db_xref="CDD:239200"
+ misc_feature complement(order(4166563..4166568,4166632..4166634,
+ 4166638..4166640,4166731..4166733,4166821..4166823,
+ 4166947..4166949,4167028..4167030,4167115..4167117,
+ 4167187..4167195))
+ /locus_tag="SARI_04246"
+ /note="FMN binding site [chemical binding]; other site"
+ /db_xref="CDD:239200"
+ misc_feature complement(order(4166563..4166565,4166632..4166637,
+ 4166722..4166727,4166731..4166736,4166815..4166817,
+ 4166821..4166823,4166935..4166940,4167028..4167030))
+ /locus_tag="SARI_04246"
+ /note="active site"
+ /db_xref="CDD:239200"
+ misc_feature complement(order(4166725..4166727,4166731..4166733,
+ 4166815..4166817,4166938..4166940))
+ /locus_tag="SARI_04246"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:239200"
+ misc_feature complement(order(4166632..4166637,4166722..4166724,
+ 4166734..4166736,4166821..4166823,4166935..4166937))
+ /locus_tag="SARI_04246"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:239200"
+ unsure 4166894..4166918
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(4167503..4167628)
+ /locus_tag="SARI_04247"
+ CDS complement(4167503..4167628)
+ /locus_tag="SARI_04247"
+ /inference="protein motif:ScanRegExp:IPR002000"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573172.1"
+ /db_xref="GI:161506060"
+ /db_xref="InterPro:IPR002000"
+ /translation="MPFIKIKTCLLAPYSLAMVKNYAQRENDLVLKRDGDPIHLG"
+ gene complement(4167616..4168260)
+ /locus_tag="SARI_04248"
+ CDS complement(4167616..4168260)
+ /locus_tag="SARI_04248"
+ /inference="protein motif:BlastProDom:IPR001148"
+ /inference="protein motif:Gene3D:IPR001148"
+ /inference="protein motif:HMMPanther:IPR001148"
+ /inference="protein motif:HMMPfam:IPR001148"
+ /inference="protein motif:superfamily:IPR001148"
+ /inference="similar to AA sequence:INSD:AAC77887.1"
+ /note="'KEGG: eca:ECA0257 6.2e-36 cah; carbonic anhydrase
+ K01674;
+ COG: COG3338 Carbonic anhydrase;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573173.1"
+ /db_xref="GI:161506061"
+ /db_xref="InterPro:IPR001148"
+ /translation="MKLPLCTATLLTLFLPPLSTFAAIQEEAHQPCQTDINQPPGDIR
+ STSEVHVSPLEVQYIDSPSELINNGQPLQASMKSFAANTIRLDDQLYTLEEFHFHVPA
+ ENTIDGKRYAMELHLMHRNSNGDLAVVAVIFTEGTANKTLERLWQSIPTLLEKRATLF
+ APVDINQLLPADKTYWRFNGSQPSPFCLENAAWVVLQHPLTLSSAQLEKFACRS"
+ misc_feature complement(4167631..4168167)
+ /locus_tag="SARI_04248"
+ /note="Carbonic anhydrase alpha, prokaryotic-like
+ subfamily. Carbonic anhydrases (CAs) are zinc-containing
+ enzymes that catalyze the reversible hydration of carbon
+ dioxide in a two-step mechanism: a nucleophilic attack of
+ a zinc-bound hydroxide ion on carbon...; Region:
+ alpha_CA_prokaryotic_like; cd03124"
+ /db_xref="CDD:239398"
+ misc_feature complement(order(4167712..4167714,4167913..4167915,
+ 4167952..4167954,4167964..4167966,4167970..4167972,
+ 4167976..4167978,4168051..4168053))
+ /locus_tag="SARI_04248"
+ /note="active site"
+ /db_xref="CDD:239398"
+ misc_feature complement(order(4167913..4167915,4167964..4167966,
+ 4167970..4167972))
+ /locus_tag="SARI_04248"
+ /note="zinc binding site [ion binding]; other site"
+ /db_xref="CDD:239398"
+ gene complement(4168388..4169269)
+ /gene="prmA"
+ /locus_tag="SARI_04249"
+ CDS complement(4168388..4169269)
+ /gene="prmA"
+ /locus_tag="SARI_04249"
+ /inference="protein motif:HMMPfam:IPR010456"
+ /inference="protein motif:HMMPIR:IPR004498"
+ /inference="protein motif:HMMTigr:IPR004498"
+ /inference="similar to AA sequence:INSD:AAX67227.1"
+ /note="methylates ribosomal protein L11 at multiple amino
+ acid positions; mutations of these genes in Escherichia
+ coli or Thermus thermophilus has no apparent phenotype"
+ /codon_start=1
+ /transl_table=11
+ /product="ribosomal protein L11 methyltransferase"
+ /protein_id="YP_001573174.1"
+ /db_xref="GI:161506062"
+ /db_xref="InterPro:IPR004498"
+ /db_xref="InterPro:IPR010456"
+ /translation="MPWIQLKLNTTGANAEELSDALMEAGAVSITFQDTHDTPVFEPL
+ PGETRLWGDTDVIGLFDAETDMKDVVAILEQHPLLGAGFAHKIEQLEDKDWEREWMDN
+ FHPMRFGERLWICPSWRDIPDENAVNVMLDPGLAFGTGTHPTTSLCLQWLDGLDLNGK
+ TVIDFGCGSGILAIAALKLGAAKAIGVDIDPQAIQASRDNAERNGVSDRLELYLPKDQ
+ PDAMKADVVVANILAGPLRELAPLISVLPVEGGLLGLSGILASQAESVCDAYAELFTL
+ DPVVEKEEWCRITGRKK"
+ misc_feature complement(4168391..4169266)
+ /gene="prmA"
+ /locus_tag="SARI_04249"
+ /note="Ribosomal protein L11 methyltransferase (PrmA);
+ Region: PrmA; pfam06325"
+ /db_xref="CDD:218990"
+ misc_feature complement(<4168580..4168879)
+ /gene="prmA"
+ /locus_tag="SARI_04249"
+ /note="S-adenosylmethionine-dependent methyltransferases
+ (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
+ that use S-adenosyl-L-methionine (SAM or AdoMet) as a
+ substrate for methyltransfer, creating the product
+ S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
+ cl17173"
+ /db_xref="CDD:247727"
+ gene complement(4169281..4170732)
+ /gene="panF"
+ /locus_tag="SARI_04250"
+ CDS complement(4169281..4170732)
+ /gene="panF"
+ /locus_tag="SARI_04250"
+ /inference="protein motif:HMMPanther:IPR001734"
+ /inference="protein motif:HMMPfam:IPR001734"
+ /inference="protein motif:HMMTigr:IPR001734"
+ /inference="protein motif:HMMTigr:IPR011849"
+ /inference="protein motif:ScanRegExp:IPR001734"
+ /inference="similar to AA sequence:INSD:AAL22251.1"
+ /note="mediates high affinitiy panthothenate transport
+ which is stimulated by the presence of sodium ions; member
+ of SSS family of sodium/solute symporters; the imported
+ panthothenate is phosphorylated by panthothenate kinase"
+ /codon_start=1
+ /transl_table=11
+ /product="sodium/panthothenate symporter"
+ /protein_id="YP_001573175.1"
+ /db_xref="GI:161506063"
+ /db_xref="InterPro:IPR001734"
+ /db_xref="InterPro:IPR011849"
+ /translation="MQLEVILPLLAYLVVVFGVSVYAMRKRSAGTFLNEYFLGSRSMG
+ GIVLAMTLTATYISASSFIGGPGAAYKYGLGWVLLAMIQLPAVWLSLGILGKKFAILA
+ RRYDAVTLNDMLFARYQSRLLVWLASLSLLVAFIGAMTVQFIGGARLLETAAGIPYET
+ GLLIFGVSIALYTAFGGFRASVLNDTLQGLVMLVGTIVLLVGVVHAAGGLSQAVDTLH
+ AIDPQLVTPQGADDILSPAFMTSFWVLVCFGVVGLPHTAVRCISYKDSKAVHRGIIIG
+ TIVVAMLMFGMHLAGALGRAVLPDLTVPDLVIPTLMVKVLPPFAAGIFLAAPMAAIMS
+ TINAQLLQSSATIIKDLYLNLRPDQMQNEIRLKRMSAAITLLLGALLLLAAWKPPEMI
+ IWLNLLAFGGLEAVFLWPLVLGLYWERANAAGALSAMIVGGVLYALLATFNIQYLGFH
+ PIVPALLLSLLAFLIGNRFGSSASQATVLSTDK"
+ misc_feature complement(4169311..4170720)
+ /gene="panF"
+ /locus_tag="SARI_04250"
+ /note="Na(+)/pantothenate cotransporters: PanF of
+ Escherichia coli and related proteins; solute binding
+ domain; Region: SLC5sbd_PanF; cd10327"
+ /db_xref="CDD:212037"
+ misc_feature complement(order(4169728..4169733,4169740..4169742,
+ 4170562..4170564,4170571..4170573))
+ /gene="panF"
+ /locus_tag="SARI_04250"
+ /note="Na binding site [ion binding]; other site"
+ /db_xref="CDD:212037"
+ gene complement(4170722..4170964)
+ /locus_tag="SARI_04251"
+ CDS complement(4170722..4170964)
+ /locus_tag="SARI_04251"
+ /inference="protein motif:HMMPfam:IPR010398"
+ /inference="similar to AA sequence:REFSEQ:YP_152383.1"
+ /note="'COG: COG3924 Predicted membrane protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573176.1"
+ /db_xref="GI:161506064"
+ /db_xref="InterPro:IPR010398"
+ /translation="MDTRFVQAHKEARWALWLTLCYLAAWLVAAYLPGSSPGITGLPH
+ WFEMACLLTPLVFILLCWAMVKFIYRDIPLEDDDAA"
+ misc_feature complement(4170725..4170964)
+ /locus_tag="SARI_04251"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10633"
+ /db_xref="CDD:182602"
+ gene complement(4171076..4173010)
+ /locus_tag="SARI_04252"
+ CDS complement(4171076..4173010)
+ /locus_tag="SARI_04252"
+ /inference="similar to AA sequence:REFSEQ:ZP_00390010.1"
+ /note="'COG: NOG04153 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573177.1"
+ /db_xref="GI:161506065"
+ /translation="MNNAKKNIAKILLLLSLSPGISALANTQKNNNPTDEQWWIPYKN
+ SQAFNETLDQFGLTYHQLEASPEKALSRSADVNDVLFWQKRTMAIYANAKEGIYHIPV
+ TEQHDNGRSRTTTNGRTPAFFTYYYANVNDTMTLRTENQPDDVKCYSLLENNYSEPQA
+ VDAVMLNHNSETKITFNHKGVVLLQCWGTSEDASLKHVNTLISTRVISTTASTQPVFV
+ LGVNTLDDWKNISQQSTPSGQTLLFDGRTRYYAANNVGKASKDHNIEQTLREHLLNTI
+ VYDKLNGIDGSSPINEALRSLDIASYNSCCWAEGGDGRIGIGFGSSIPTQSSWGEWHE
+ FGHQNQMQWSWNGLGETTVNIYSIAACRATRGEVDVKTCHENLQYNGFQWDQQAVGNF
+ LKSGQTWDLDTDTNVFHQLMMFAQLETSWPDLYPALGKAYREINNYYNGSAKVDSKQE
+ KVDFFVVNASKYSGHDLRKFFTHWGVDYSTDADNQITAMNLPQVIEPSGTVSATLEKR
+ ADQTQVEAYATIKNADTHYNTGFVTNTSTIGPTSLVWNGGLYQSTPLYVQVVDTKNRN
+ FIVKLYGQRTAGYCEPYTLNTAGACNSGSDTTVTIRYDSSNNQDLPAGEYHGVLHLIA
+ RDWHNDNWSENVNFNIHINN"
+ misc_feature complement(4171757..4172509)
+ /locus_tag="SARI_04252"
+ /note="Peptidase M60-like family; Region: M60-like;
+ pfam13402"
+ /db_xref="CDD:222105"
+ gene complement(4173366..4174715)
+ /locus_tag="SARI_04253"
+ CDS complement(4173366..4174715)
+ /locus_tag="SARI_04253"
+ /inference="protein motif:Gene3D:IPR013816"
+ /inference="protein motif:Gene3D:IPR013817"
+ /inference="protein motif:HMMPfam:IPR005479"
+ /inference="protein motif:HMMPfam:IPR005481"
+ /inference="protein motif:HMMPfam:IPR005482"
+ /inference="protein motif:HMMTigr:IPR004549"
+ /inference="protein motif:ScanRegExp:IPR005479"
+ /inference="protein motif:superfamily:IPR011054"
+ /inference="similar to AA sequence:INSD:AAV79070.1"
+ /note="'an AccC homodimer forms the biotin carboxylase
+ subunit of the acetyl CoA carboxylase, an enzyme that
+ catalyzes the formation of malonyl-CoA, which in turn
+ controls the rate of fatty acid metabolism'"
+ /codon_start=1
+ /transl_table=11
+ /product="acetyl-CoA carboxylase biotin carboxylase
+ subunit"
+ /protein_id="YP_001573178.1"
+ /db_xref="GI:161506066"
+ /db_xref="InterPro:IPR004549"
+ /db_xref="InterPro:IPR005479"
+ /db_xref="InterPro:IPR005481"
+ /db_xref="InterPro:IPR005482"
+ /db_xref="InterPro:IPR011054"
+ /db_xref="InterPro:IPR013816"
+ /db_xref="InterPro:IPR013817"
+ /translation="MLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLL
+ ADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIF
+ IGPKADTIRLMGDKVSAITAMKKAGVPTVPGSDGPLGDDMNANRAHAKRIGYPVIIKA
+ SGGGGGRGMRVVRSDAELAQSISMTKAEAKAAFSNDMVYMEKYLENPRHIEIQVLADG
+ QGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFE
+ FLFENGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPLSITQDEVVVRGHA
+ VECRINAEDPNTFLPSPGKITRFHAPGGFGVRWESHIYAGYTVPPYYDSMIGKLICYG
+ ENRDVAIARMKNALQELIIDGIKTNIDLQTRIMNDEHFQHGGTNIHYLEKKLGLQEK"
+ misc_feature complement(4173369..4174715)
+ /locus_tag="SARI_04253"
+ /note="acetyl-CoA carboxylase biotin carboxylase subunit;
+ Validated; Region: PRK08591"
+ /db_xref="CDD:236307"
+ misc_feature complement(4174389..4174712)
+ /locus_tag="SARI_04253"
+ /note="Carbamoyl-phosphate synthase L chain, N-terminal
+ domain; Region: CPSase_L_chain; pfam00289"
+ /db_xref="CDD:201133"
+ misc_feature complement(4173744..4174373)
+ /locus_tag="SARI_04253"
+ /note="Carbamoyl-phosphate synthase L chain, ATP binding
+ domain; Region: CPSase_L_D2; pfam02786"
+ /db_xref="CDD:190425"
+ misc_feature complement(4173393..4173710)
+ /locus_tag="SARI_04253"
+ /note="Biotin carboxylase C-terminal domain; Region:
+ Biotin_carb_C; smart00878"
+ /db_xref="CDD:214878"
+ gene complement(4174726..4175196)
+ /locus_tag="SARI_04254"
+ CDS complement(4174726..4175196)
+ /locus_tag="SARI_04254"
+ /inference="protein motif:FPrintScan:IPR001249"
+ /inference="protein motif:HMMPfam:IPR000089"
+ /inference="protein motif:HMMTigr:IPR001249"
+ /inference="protein motif:ScanRegExp:IPR001882"
+ /inference="protein motif:superfamily:IPR011053"
+ /inference="similar to AA sequence:INSD:CAD07894.1"
+ /note="'composes the biotin carboxyl carrier protein
+ subunit of the acetyl-CoA carboxylase complex, the enzyme
+ that catalyzes the carboxylation of acetyl-CoA to
+ malonyl-CoA, which in turn controls the rate of fatty acid
+ metabolism'"
+ /codon_start=1
+ /transl_table=11
+ /product="acetyl-CoA carboxylase biotin carboxyl carrier
+ protein subunit"
+ /protein_id="YP_001573179.1"
+ /db_xref="GI:161506067"
+ /db_xref="InterPro:IPR000089"
+ /db_xref="InterPro:IPR001249"
+ /db_xref="InterPro:IPR001882"
+ /db_xref="InterPro:IPR011053"
+ /translation="MDIRKIKKLIELVEESGISELEISEGEESVRISRTTANAGFPVM
+ QQAYAAPMMQQPALSNAVAPAATPAMEAPAAAEISGHIVRSPMVGTFYRTPSPDAKAF
+ IEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE"
+ misc_feature complement(4174729..4175196)
+ /locus_tag="SARI_04254"
+ /note="acetyl-CoA carboxylase biotin carboxyl carrier
+ protein subunit; Validated; Region: PRK06302"
+ /db_xref="CDD:235777"
+ misc_feature complement(4174732..4174950)
+ /locus_tag="SARI_04254"
+ /note="The biotinyl-domain or biotin carboxyl carrier
+ protein (BCCP) domain is present in all biotin-dependent
+ enzymes, such as acetyl-CoA carboxylase, pyruvate
+ carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA
+ carboxylase, geranyl-CoA carboxylase; Region:
+ biotinyl_domain; cd06850"
+ /db_xref="CDD:133459"
+ misc_feature complement(order(4174807..4174809,4174828..4174836,
+ 4174861..4174863))
+ /locus_tag="SARI_04254"
+ /note="carboxyltransferase (CT) interaction site; other
+ site"
+ /db_xref="CDD:133459"
+ misc_feature complement(4174831..4174833)
+ /locus_tag="SARI_04254"
+ /note="biotinylation site [posttranslational
+ modification]; other site"
+ /db_xref="CDD:133459"
+ gene complement(4175589..4176188)
+ /locus_tag="SARI_04255"
+ CDS complement(4175589..4176188)
+ /locus_tag="SARI_04255"
+ /inference="protein motif:HMMPfam:IPR013130"
+ /inference="similar to AA sequence:INSD:AAX67222.1"
+ /note="in Escherichia coli this inner membrane protein was
+ found to anchor the periplasmic catalytic oxidoreductase
+ YedY; sulfite oxidase activity not demonstrated; contains
+ heme"
+ /codon_start=1
+ /transl_table=11
+ /product="putative sulfite oxidase subunit YedZ"
+ /protein_id="YP_001573180.1"
+ /db_xref="GI:161506068"
+ /db_xref="InterPro:IPR013130"
+ /translation="MRLTAKQIIWLKVCLHLVGFLPLLWLFWAINQGGLSADPVKDIQ
+ HFTGRTALKFLLATLLISPLARYAKQPLLIRTRRLLGLWCFVWATLHLTSYALLELGI
+ HNLALLGSELISRPYLTLGIISWLALLALTLTSTQFAQRKLGKRWQTLHNVVYLVAIL
+ APVHYLWSVKVLSPQPVIYAALALVLLALRYRKFRQWRR"
+ misc_feature complement(4175592..4176188)
+ /locus_tag="SARI_04255"
+ /note="putative sulfite oxidase subunit YedZ; Reviewed;
+ Region: PRK05419"
+ /db_xref="CDD:235452"
+ gene complement(4176189..4177193)
+ /locus_tag="SARI_04256"
+ CDS complement(4176189..4177193)
+ /locus_tag="SARI_04256"
+ /inference="protein motif:Gene3D:IPR000572"
+ /inference="protein motif:HMMPfam:IPR000572"
+ /inference="protein motif:superfamily:IPR000572"
+ /inference="similar to AA sequence:INSD:CAD07892.1"
+ /note="in Escherichia coli this periplasmic enzyme was
+ found to encode the periplasmic catalytic subunit of an
+ oxidoreductase; sulfite oxidase activity not demonstrated;
+ requires inner membrane anchor protein YedZ"
+ /codon_start=1
+ /transl_table=11
+ /product="putative sulfite oxidase subunit YedY"
+ /protein_id="YP_001573181.1"
+ /db_xref="GI:161506069"
+ /db_xref="InterPro:IPR000572"
+ /translation="MKKIRPLTEADVTAESAFFMQRRQVLKALGISAAALSLPSTAQA
+ DLLSWFKGNDRPKAPVGKPLEFSQPAAWRSDLALTPEDKVTGYNNFYEFGLDKADPAA
+ NAGSLKTEPWTLKISGEVAKPYTLDYDDLTHRFPLEERIYRMRCVEAWSMVVPWIGFP
+ LYKLLTQAQPTSHAKYVAFETLYAPDDMPGQKDRFVGGGLKYPYVEGLRLDEAMHPLT
+ LMTVGVYGKALPPQNGAPIRLIVPWKYGFKGIKSIVSIKLTRERPPTTWNLSAPNEYG
+ FYANVNPHVDHPRWSQATERFIGSGGILDVQRQPTLLFNGYASEVASLYRGLNLRENF
+ "
+ misc_feature complement(4176192..4176977)
+ /locus_tag="SARI_04256"
+ /note="TMAO/DMSO reductase; Reviewed; Region: PRK05363"
+ /db_xref="CDD:235431"
+ misc_feature complement(4176282..4176941)
+ /locus_tag="SARI_04256"
+ /note="YedY_like molybdopterin cofactor (Moco) binding
+ domain, a subgroup of the sulfite oxidase (SO) family of
+ molybdopterin binding domains. Escherichia coli YedY has
+ been propsed to form a heterodimer, consisting of a
+ soluble catalytic subunit termed YedY; Region:
+ YedY_like_Moco; cd02107"
+ /db_xref="CDD:239025"
+ misc_feature complement(order(4176441..4176443,4176447..4176449,
+ 4176456..4176458,4176480..4176482,4176495..4176497,
+ 4176582..4176584,4176651..4176653,4176756..4176758,
+ 4176918..4176932))
+ /locus_tag="SARI_04256"
+ /note="Moco binding site; other site"
+ /db_xref="CDD:239025"
+ misc_feature complement(4176756..4176758)
+ /locus_tag="SARI_04256"
+ /note="metal coordination site [ion binding]; other site"
+ /db_xref="CDD:239025"
+ gene complement(4177310..4178284)
+ /locus_tag="SARI_04257"
+ CDS complement(4177310..4178284)
+ /locus_tag="SARI_04257"
+ /inference="protein motif:HMMPanther:IPR002085"
+ /inference="protein motif:HMMPfam:IPR013149"
+ /inference="protein motif:HMMPfam:IPR013154"
+ /inference="protein motif:ScanRegExp:IPR002345"
+ /inference="protein motif:superfamily:IPR011032"
+ /inference="similar to AA sequence:INSD:CAD07891.1"
+ /note="'KEGG: eci:UTI89_C3684 5.3e-149 yhdH; protein YhdH
+ K00001;
+ COG: COG0604 NADPH:quinone reductase and related
+ Zn-dependent oxidoreductases;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573182.1"
+ /db_xref="GI:161506070"
+ /db_xref="InterPro:IPR002085"
+ /db_xref="InterPro:IPR002345"
+ /db_xref="InterPro:IPR011032"
+ /db_xref="InterPro:IPR013149"
+ /db_xref="InterPro:IPR013154"
+ /translation="MQALILEQQDGKTLASVQYLEENQLPEGDVTVDVHWSSLNYKDA
+ LAITGKGKIIRHFPMIPGIDFAGTVRASEDSRFHAGQEVLLTGWGVGENHWGGLAELA
+ RVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEEAGIHPEDGEIVVTGASGGVG
+ STAVALLHQLGYQVVAVSGRESTHDYLHALGANRILPRDAFTDARPLEKQLWAGAIDT
+ VGDSVLAKILAQMNYSGCVAACGLAGGFALPTTVMPFILRNVRLQGVDSVMTPPARRV
+ EAWKRLVNGLPDGFYAQAATEINLSDAPKFADAIINNQVQGRTLVKIK"
+ misc_feature complement(4177316..4178284)
+ /locus_tag="SARI_04257"
+ /note="Yhdh putative quinone oxidoreductases; Region:
+ MDR_yhdh; cd08288"
+ /db_xref="CDD:176248"
+ misc_feature complement(4177316..4178281)
+ /locus_tag="SARI_04257"
+ /note="putative quinone oxidoreductase, YhdH/YhfP family;
+ Region: oxido_YhdH; TIGR02823"
+ /db_xref="CDD:234026"
+ misc_feature complement(order(4177340..4177342,4177346..4177348,
+ 4177355..4177357,4177481..4177492,4177553..4177567,
+ 4177628..4177633,4177691..4177693,4177745..4177753,
+ 4177808..4177819,4177823..4177825,4177895..4177897,
+ 4177904..4177909,4178162..4178167))
+ /locus_tag="SARI_04257"
+ /note="NADP binding site [chemical binding]; other site"
+ /db_xref="CDD:176248"
+ misc_feature complement(order(4177475..4177480,4177487..4177510,
+ 4177514..4177522,4177526..4177537,4177541..4177543,
+ 4177559..4177570,4177586..4177588,4177667..4177669))
+ /locus_tag="SARI_04257"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:176248"
+ gene 4178488..4180428
+ /locus_tag="SARI_04258"
+ CDS 4178488..4180428
+ /locus_tag="SARI_04258"
+ /inference="protein motif:HMMPfam:IPR000160"
+ /inference="protein motif:HMMPfam:IPR001633"
+ /inference="protein motif:HMMSmart:IPR000160"
+ /inference="protein motif:HMMSmart:IPR001633"
+ /inference="protein motif:HMMTigr:IPR000160"
+ /note="regulates the degradation of the small RNAs CsrB
+ and CsrC; may function to targate RNase E to specific RNA
+ molecules"
+ /codon_start=1
+ /transl_table=11
+ /product="regulatory protein CsrD"
+ /protein_id="YP_001573183.1"
+ /db_xref="GI:161506071"
+ /db_xref="InterPro:IPR000160"
+ /db_xref="InterPro:IPR001633"
+ /translation="MRLTTKFSAFVTLLTGLTIFVTLIGCSLSFYNAVQDKYVCRVQA
+ AATAIDTHLVTRDIVSLTPRIDELMIVSDIVRVDLLQGEHRVYSYSRTRGYRPAGTSD
+ MYRELVVPLVKHPGMSLRLVYQDPMGNYFHSLITTAPLTLAIGFIVLILFLSVRWLQR
+ QLSGQELLEIRSTRILNGERGPNVRGSVYEWPARTSSALDVLLSEIQFAHEQRSRLDT
+ LIRSYAAQDAKTGLGNRLFFDNQLATLLEDQEKVGVHGVVMMIRLPDFNLLRDNLGGN
+ QAEEQMFMLINLLSTFIMRYPGSLLARYHRSDFAVLLPHRTLKEAESIAGQLLKAVDA
+ LPANKMLDRDDMVHIGICAWRSGQSTGQVMEHAEAAARNAALQGGNSWAIYDDTLPEK
+ GRGNVRWRTLIEQMLNRGGPRLYQKPAVTREGRVHHRELMCRIYDGKEEVSSAEYMPM
+ VLQFGLSEEYDRLQISRLITLLGYWPDENLAMQLTVESLIRPRFQRWLRDTLMQCEKL
+ QRNRIIIELAEADVCQHISRLQPILRLVNALGVRVAVTQAGLTLVSTSWIKALNVELL
+ KLHPSLVRNIEKRTENQLLVQSLVEACAGTPTQVYATGVRSRGEWQTLIKRGVAGGQG
+ DFFASSQPLDTNVKKYSQRYSV"
+ misc_feature 4178488..4180389
+ /locus_tag="SARI_04258"
+ /note="regulatory protein CsrD; Provisional; Region:
+ PRK11059"
+ /db_xref="CDD:236833"
+ misc_feature 4179166..4179636
+ /locus_tag="SARI_04258"
+ /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region:
+ GGDEF; cd01949"
+ /db_xref="CDD:143635"
+ misc_feature order(4179271..4179273,4179406..4179408)
+ /locus_tag="SARI_04258"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:143635"
+ misc_feature order(4179286..4179288,4179295..4179300,4179313..4179315,
+ 4179394..4179396,4179400..4179411)
+ /locus_tag="SARI_04258"
+ /note="active site"
+ /db_xref="CDD:143635"
+ misc_feature order(4179382..4179384,4179466..4179468)
+ /locus_tag="SARI_04258"
+ /note="I-site; other site"
+ /db_xref="CDD:143635"
+ misc_feature 4179694..4180389
+ /locus_tag="SARI_04258"
+ /note="EAL domain. This domain is found in diverse
+ bacterial signaling proteins. It is called EAL after its
+ conserved residues and is also known as domain of unknown
+ function 2 (DUF2). The EAL domain has been shown to
+ stimulate degradation of a second...; Region: EAL;
+ cd01948"
+ /db_xref="CDD:238923"
+ gene 4180737..4181780
+ /locus_tag="SARI_04259"
+ CDS 4180737..4181780
+ /locus_tag="SARI_04259"
+ /inference="protein motif:HMMPanther:IPR001023"
+ /inference="protein motif:HMMPfam:IPR004753"
+ /inference="protein motif:HMMTigr:IPR004753"
+ /inference="similar to AA sequence:INSD:ABP62344.1"
+ /note="functions in MreBCD complex in some organisms"
+ /codon_start=1
+ /transl_table=11
+ /product="rod shape-determining protein MreB"
+ /protein_id="YP_001573184.1"
+ /db_xref="GI:161506072"
+ /db_xref="InterPro:IPR001023"
+ /db_xref="InterPro:IPR004753"
+ /translation="MLKKFRGMFSNDLSIDLGTANTLIYVKGQGIVLNEPSVVAIRQD
+ RAGSPKSVAAVGHDAKQMLGRTPGNIAAIRPMKDGVIADFFVTEKMLQHFIKQVHSNS
+ FMRPSPRVLVCVPVGATQVERRAIRESAQGAGAREVFLIEEPMAAAIGAGLPVSEATG
+ SMVVDIGGGTTEVAVISLNGVVYSSSVRIGGDRFDEAIINYVRRNYGSLIGEATAERI
+ KHEIGSAYPGDEVREIEVRGRNLAEGVPRGFTLNSNEILEALQEPLTGIVSAVMVALE
+ QCPPELASDISERGMVLTGGGALLRNLDRLLMEETGIPVVVAEDPLTCVARGGGKALE
+ MIDMHGGDLFSEE"
+ misc_feature 4180752..4181771
+ /locus_tag="SARI_04259"
+ /note="rod shape-determining protein MreB; Provisional;
+ Region: PRK13927"
+ /db_xref="CDD:237562"
+ misc_feature 4180773..4181747
+ /locus_tag="SARI_04259"
+ /note="MreB and similar proteins; Region: MreB_like;
+ cd10225"
+ /db_xref="CDD:212668"
+ misc_feature order(4180782..4180784,4180788..4180799,4180971..4180973,
+ 4181163..4181165,4181229..4181231,4181235..4181246,
+ 4181307..4181312,4181382..4181384,4181391..4181396,
+ 4181619..4181627,4181631..4181636,4181700..4181702,
+ 4181709..4181711)
+ /locus_tag="SARI_04259"
+ /note="nucleotide binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:212668"
+ misc_feature order(4180782..4180784,4181229..4181231)
+ /locus_tag="SARI_04259"
+ /note="Mg binding site [ion binding]; other site"
+ /db_xref="CDD:212668"
+ misc_feature order(4180860..4180862,4180920..4180922,4180944..4180946,
+ 4181208..4181210,4181214..4181216,4181274..4181276,
+ 4181370..4181372,4181376..4181378,4181445..4181447,
+ 4181469..4181471,4181478..4181480,4181568..4181570,
+ 4181577..4181579,4181673..4181675,4181745..4181747)
+ /locus_tag="SARI_04259"
+ /note="putative protofilament interaction site
+ [polypeptide binding]; other site"
+ /db_xref="CDD:212668"
+ misc_feature order(4181190..4181195,4181217..4181219,4181595..4181603,
+ 4181676..4181678,4181682..4181684,4181691..4181693)
+ /locus_tag="SARI_04259"
+ /note="RodZ interaction site [polypeptide binding]; other
+ site"
+ /db_xref="CDD:212668"
+ gene 4181845..4182900
+ /locus_tag="SARI_04260"
+ CDS 4181845..4182900
+ /locus_tag="SARI_04260"
+ /inference="protein motif:HMMPfam:IPR007221"
+ /inference="protein motif:HMMTigr:IPR005223"
+ /inference="similar to AA sequence:INSD:AAL22242.1"
+ /note="in some organisms this protein is a transmembrane
+ protein while in others it is periplasmic; involved in
+ some organisms with other components of the MreBCD complex
+ and with penicillin binding proteins in the periplasm or
+ cell wall"
+ /codon_start=1
+ /transl_table=11
+ /product="rod shape-determining protein MreC"
+ /protein_id="YP_001573185.1"
+ /db_xref="GI:161506073"
+ /db_xref="InterPro:IPR005223"
+ /db_xref="InterPro:IPR007221"
+ /translation="MKPIFSRGPSLQIRLILAVLVALGVIIADSRLGTFSQIRTYMDT
+ AVSPFYFISNGPRELLDSVSQTLASRDQLELENRALRQELLLKNSDLLMLGQYKQENA
+ RLRELLGSPLRQDEQKMVTQVISTVNDPYSDQVVIDKGSVNGVYEGQPVISDKGVVGQ
+ VVAVAKLTSRVLLICDATHALPIQVLRNDIRVIAAGNGCTDDLQLEHLPANTDIRVGD
+ VLVTSGLGGRFPEGYPVAVVSSVKLDTQRAYTVIQARPTAGLQRLRYLLLLWGADRNG
+ ANPLTPEEVHRVANERLMQMMPQVLPSPDAMGPPAPVPDPATGITPPSAGQTAPVSTQ
+ PSPSGATTSPARAPGGQ"
+ misc_feature 4181857..4182696
+ /locus_tag="SARI_04260"
+ /note="rod shape-determining protein MreC; Region: mreC;
+ TIGR00219"
+ /db_xref="CDD:129323"
+ misc_feature 4182208..4182618
+ /locus_tag="SARI_04260"
+ /note="rod shape-determining protein MreC; Region: MreC;
+ pfam04085"
+ /db_xref="CDD:217883"
+ gene 4182900..4183388
+ /locus_tag="SARI_04261"
+ CDS 4182900..4183388
+ /locus_tag="SARI_04261"
+ /inference="protein motif:HMMPfam:IPR007227"
+ /inference="similar to AA sequence:INSD:CAD07887.1"
+ /note="part of cell wall structural complex MreBCD;
+ transmembrane component"
+ /codon_start=1
+ /transl_table=11
+ /product="rod shape-determining protein MreD"
+ /protein_id="YP_001573186.1"
+ /db_xref="GI:161506074"
+ /db_xref="InterPro:IPR007227"
+ /translation="MASYRSQGRWVIWLSFLIALLLQIMPWPDDIIVFRPNWVLLILL
+ YWILALPHRVNVGTGFVMGAILDLISGSTLGVRALSMSIVAYLVALKFQLFRNLALWQ
+ QALVVMLLSLAVDIIVFWAEFLVINVSFRPEVFWSSVINGVLWPWLFLLMRKVRQQFA
+ VQ"
+ misc_feature 4182900..4183385
+ /locus_tag="SARI_04261"
+ /note="rod shape-determining protein MreD; Provisional;
+ Region: PRK11060"
+ /db_xref="CDD:182936"
+ gene 4183397..4183990
+ /locus_tag="SARI_04262"
+ CDS 4183397..4183990
+ /locus_tag="SARI_04262"
+ /inference="protein motif:HMMPfam:IPR003697"
+ /inference="protein motif:HMMTigr:IPR003697"
+ /inference="similar to AA sequence:REFSEQ:YP_218296.1"
+ /note="Maf; overexpression in Bacillus subtilis inhibits
+ septation in the dividing cell"
+ /codon_start=1
+ /transl_table=11
+ /product="Maf-like protein"
+ /protein_id="YP_001573187.1"
+ /db_xref="GI:161506075"
+ /db_xref="InterPro:IPR003697"
+ /translation="MTTLYLASGSPRRQELLTQLGCSFEQVVPGIEEQRRAQESAPQY
+ VVRLAREKAQAGVALVPRDLPVLGADTIVVLNGEVLEKPRDAVHAAEMLRLLSGNTHQ
+ VMTAVALADSQQTLDCLVVTEVTFRTLSAQDIAGYVASGEPLDKAGAYGIQGRGGCFV
+ RKINGSYHAVVGLPLVETYELLNHFNALRDKRDKHDG"
+ misc_feature 4183403..4183972
+ /locus_tag="SARI_04262"
+ /note="Maf-like protein; Region: Maf; pfam02545"
+ /db_xref="CDD:202278"
+ misc_feature 4183406..4183942
+ /locus_tag="SARI_04262"
+ /note="Nucleotide binding protein Maf. Maf has been
+ implicated in inhibition of septum formation in
+ eukaryotes, bacteria and archaea, but homologs in
+ B.subtilis and S.cerevisiae are nonessential for cell
+ division. Maf has been predicted to be a nucleotide-
+ or...; Region: Maf; cd00555"
+ /db_xref="CDD:238310"
+ misc_feature order(4183418..4183420,4183433..4183435,4183493..4183495,
+ 4183550..4183552,4183604..4183606,4183640..4183642)
+ /locus_tag="SARI_04262"
+ /note="active site"
+ /db_xref="CDD:238310"
+ misc_feature order(4183532..4183534,4183736..4183753)
+ /locus_tag="SARI_04262"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238310"
+ gene 4183980..4185449
+ /locus_tag="SARI_04263"
+ CDS 4183980..4185449
+ /locus_tag="SARI_04263"
+ /inference="protein motif:Gene3D:IPR012340"
+ /inference="protein motif:HMMPfam:IPR003029"
+ /inference="protein motif:HMMSmart:IPR003029"
+ /inference="protein motif:HMMTigr:IPR004659"
+ /inference="protein motif:superfamily:IPR008994"
+ /inference="similar to AA sequence:REFSEQ:NP_457746.1"
+ /note="involved in the processing of the 5'end of 16S
+ rRNA"
+ /codon_start=1
+ /transl_table=11
+ /product="ribonuclease G"
+ /protein_id="YP_001573188.1"
+ /db_xref="GI:161506076"
+ /db_xref="InterPro:IPR003029"
+ /db_xref="InterPro:IPR004659"
+ /db_xref="InterPro:IPR008994"
+ /db_xref="InterPro:IPR012340"
+ /translation="MTAELLVNVTPSETRVAYIDGGILQEIHIEREARRGIVGNIYKG
+ RVSRVLPGMQAAFVDIGLDKAAFLHASDIMPHTECVAGDEQKQFTVRDISELVRQGQD
+ LMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGASHVGVSQRIESESERERLKKVVAE
+ YCDEQGGFIIRTAAEGVCEEDLASDAAYLKRVWTKVMERKKRPQTRYQMYGELALAQR
+ VLRDFADAQLDRIRVDSRLTYESLLEFTAEYIPEMTSKLEHYSGRQPIFDLYDVENEI
+ QRALERKVELKSGGYLIIDQTEAMTTVDINTGAFVGHRNLDDTIFNTNIEATQAIARQ
+ LRLRNLGGIIIIDFIDMNNEDHRRRVLHSLEQALSKDRVKTSINGFSPLGLVEMTRKR
+ TRESVEHVLCNECPTCHGRGTVKTVETVCYEIMREIVRVHHAYDSDRFLVYASPAVAE
+ ALKGEESHALAEVEIFVGKQVKVQVEPLYNQEQFDVVMM"
+ misc_feature 4183980..4185446
+ /locus_tag="SARI_04263"
+ /note="ribonuclease G; Provisional; Region: PRK11712"
+ /db_xref="CDD:183285"
+ misc_feature 4184073..4184363
+ /locus_tag="SARI_04263"
+ /note="S1_RNase_E: RNase E and RNase G, S1-like
+ RNA-binding domain. RNase E is an essential
+ endoribonuclease in the processing and degradation of RNA.
+ In addition to its role in mRNA degradation, RNase E has
+ also been implicated in the processing of rRNA, and...;
+ Region: S1_RNase_E; cd04453"
+ /db_xref="CDD:239900"
+ misc_feature order(4184106..4184108,4184271..4184273,4184283..4184285)
+ /locus_tag="SARI_04263"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:239900"
+ misc_feature order(4184178..4184180,4184304..4184306,4184313..4184315,
+ 4184322..4184327,4184355..4184357)
+ /locus_tag="SARI_04263"
+ /note="oligonucleotide binding site [chemical binding];
+ other site"
+ /db_xref="CDD:239900"
+ gene 4185535..4189356
+ /locus_tag="SARI_04264"
+ CDS 4185535..4189356
+ /locus_tag="SARI_04264"
+ /inference="protein motif:HMMTigr:IPR011836"
+ /note="'COG: COG3164 Predicted membrane protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573189.1"
+ /db_xref="GI:161506077"
+ /db_xref="InterPro:IPR011836"
+ /translation="MADKERRVRRLPGILLLTGAALIVIAALLVSGLRLALPHLDAWR
+ PAILNKIESATGVPVAASQLSASWQNFGPTLEAHNIHAALKDGGELSIKRVTLALDVW
+ QSLLHMRWQFRDLTFWQLNFRTNTPLQSSDGEGIETSRLSDLFLRQFDHFDLRDSQIS
+ FLTLSGQRAELAIPQLTWLNGKDRHRAEGEVSLSSLTGQHGVMQVRMDLRDDDGLLNN
+ GRVWLQADDIDVKPWLGKWMQDNVALQTARFSLEGWMTLSKGEIAGGDVWLKQGGASW
+ LGDNTTHTLSVDNLTAQISREQPGWQFYIPDTRITLDGKPWPSGALTVAWLPQQDVGG
+ ENHTRSDELRIRASNLELAGLEALRPLAAKLSPVLGEIWQATQPSGKIATLALDIPLQ
+ ATEKTRFQASWKNLAWKQWKLLPGAEHFSGTLVGSVEDGQMKVAMQQAKMPYETVFRA
+ PLEIENGVATLSWLKNENGFQLDGRDIDVKAKAVHARGGFRYLQPTGDEPWLGILAGI
+ STDDGAQAWRYFPENLMGKALVDYLSGAIQGGEADNATLVYGGNPHLFPYKHNEGQFE
+ VLVPLRNATFAFQPDWPALKNLNIELDFLNDGLWMRSDSVDLGGVKASKLAAAIPDYS
+ KEKLLIDADINGPGKAVGPYFDETPLKDSLGSTLAELQLDGDVNARLHLDIPLDGEQV
+ TAEGDVSLRNNSLFIKPLNSTLKNLNGKFSFVNGALKSGPLTANWFNQPLNLDFSTTE
+ GAKAYQVAVNLNGNWQPTRMGVLPSPLNDALSGSVTWNGKVGIDLPYHAGATYNIELN
+ GDLKNVSSHLPSPLNKPAGEAIPVHINADGNLKSFALTGSAGSKNHFNSRWLLNQKLT
+ LDRAIWTTDSRTIPPLPAQQGVELNLPALDGAQWLALFQKGAVDNVSSSAEFPQRVTL
+ RTPALSLGGQQWNNLSVVSAPSLNGTKIEAQGREVNATLTMRNHAPWLANIKYLYYNP
+ GVAKTHASSPTPTSPFASASTISFRGWPDLQLRCEECWLWGQKYGRIDGDFAIKGNTL
+ TLANGLIDTGFARLKANGEWVNAPGNERTSLKGSLHGRNLDAAAGFFGISTPIQNASF
+ NVDYDLHWRNPPWQPDEATLNGILRTRLGKGEFTDLSSGHAGQLLRLLSFDALLRKLR
+ FDFSDTFSEGFWFDSIHSTAWIKDGVLHTDDTLVDGLEADIAMKGSVDLVRRRLDMEA
+ VVAPEISATVGVAAAFAVNPIVGAAVFAASKVLGPLWSKVSILRYRITGPVDAPQINE
+ VLRQPRKESQQ"
+ misc_feature 4186285..4189353
+ /locus_tag="SARI_04264"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10899"
+ /db_xref="CDD:236789"
+ misc_feature 4188583..4189311
+ /locus_tag="SARI_04264"
+ /note="AsmA-like C-terminal region; Region: AsmA_2;
+ pfam13502"
+ /db_xref="CDD:222180"
+ gene 4189501..4190946
+ /gene="tldD"
+ /locus_tag="SARI_04265"
+ CDS 4189501..4190946
+ /gene="tldD"
+ /locus_tag="SARI_04265"
+ /inference="protein motif:HMMPfam:IPR002510"
+ /inference="similar to AA sequence:REFSEQ:YP_218293.1"
+ /note="'responsible for the proteolytic maturation of the
+ E. coli pMccB17 plasmid-encoded microcin B17, an exported
+ protein that targets the essential topoisomerase II DNA
+ gyrase; degrades the E. coli plasmid F-encoded CcdA'"
+ /codon_start=1
+ /transl_table=11
+ /product="protease TldD"
+ /protein_id="YP_001573190.2"
+ /db_xref="GI:448236293"
+ /db_xref="InterPro:IPR002510"
+ /translation="MSLNLVSEQLLAANGLNHQDLFAILGQLAERRLDYGDLYFQSSY
+ HESWVLEDRIIKDGSYNIDQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRD
+ NGEGKVKTLAAVAHQPLYTTLDPLQSMSREEKLDILRRVDKAAREADKRVQEVNASLT
+ GVYELILVAATDGTLAADVRPLVRLSVSVQVEEDGKRERGASGGGGRFGYEYFLADLD
+ GEVRADAWAKEAVRMALVNLSAVAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRR
+ GTSVFSGQIGEQVASALCTVVDDGTMMNRRGSVAIDDEGTPGQYNVLIENGVLKGYMQ
+ DKLNARLMGAAPTGNGRRESYAHLPMPRMTNTYMLAGQSTPQEIIESVEYGIYAPNFG
+ GGQVDITSGKFVFSTSEAYLIENGKVTTPVKGATLIGSGIETMQQISMVGNDLKLDNG
+ VGVCGKEGQSLPVGVGQPTLKVDNLTVGGTA"
+ misc_feature 4189501..4190943
+ /gene="tldD"
+ /locus_tag="SARI_04265"
+ /note="protease TldD; Provisional; Region: tldD; PRK10735"
+ /db_xref="CDD:182685"
+ gene complement(4191083..4191994)
+ /locus_tag="SARI_04266"
+ CDS complement(4191083..4191994)
+ /locus_tag="SARI_04266"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="protein motif:HMMPfam:IPR005119"
+ /inference="similar to AA sequence:INSD:CAD07882.1"
+ /note="'KEGG: shn:Shewana3_3435 4.3e-09 transcriptional
+ regulator, LysR family K06022;
+ COG: COG0583 Transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative DNA-binding transcriptional regulator"
+ /protein_id="YP_001573191.1"
+ /db_xref="GI:161506079"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR005119"
+ /db_xref="InterPro:IPR011991"
+ /translation="MSVFAKVVEFGSFTAAARQLQMSVSSISQTVAKLEDELQVKLLN
+ RSTRSIGLTEAGKIYYQGCRRMLHEVQDVHEQLYAFNNTPIGTLRIGCSSTMAQNVLA
+ GLTAKLLKEYPGLAVNLVTGIPAPDLIADGLDVVIRVGALQDSSLFSRRLGAMPMVVC
+ AAKSYLAQYGAPEKPADLSSHSWLEYSVRPDNEFELIAPEGISTRLIPQGRFVTNDPM
+ TLVRWLTAGTGIAYVPLMWVIDEINRSELEILLPRYQSDPRPVYALYTEKDKLPLKVQ
+ VVINALTDYFVDVAHLFQGMHGRGKEK"
+ misc_feature complement(4191086..4191994)
+ /locus_tag="SARI_04266"
+ /note="transcriptional regulator; Provisional; Region:
+ PRK10632"
+ /db_xref="CDD:182601"
+ misc_feature complement(4191824..4191994)
+ /locus_tag="SARI_04266"
+ /note="Bacterial regulatory helix-turn-helix protein, lysR
+ family; Region: HTH_1; pfam00126"
+ /db_xref="CDD:215735"
+ misc_feature complement(4191149..4191739)
+ /locus_tag="SARI_04266"
+ /note="The C-terminal substrate binding domain of
+ LysR-type transcriptional regulator CrgA and its related
+ homologs, contains the type 2 periplasmic binding domain;
+ Region: PBP2_CrgA_like; cd08422"
+ /db_xref="CDD:176114"
+ misc_feature complement(order(4191212..4191214,4191293..4191295,
+ 4191344..4191346,4191530..4191532,4191536..4191538,
+ 4191578..4191580,4191695..4191697,4191707..4191709))
+ /locus_tag="SARI_04266"
+ /note="putative effector binding pocket; other site"
+ /db_xref="CDD:176114"
+ misc_feature complement(order(4191317..4191319,4191326..4191331,
+ 4191350..4191364,4191449..4191451,4191632..4191652,
+ 4191656..4191658,4191668..4191670,4191677..4191682,
+ 4191686..4191691,4191701..4191706))
+ /locus_tag="SARI_04266"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:176114"
+ gene 4192194..4192397
+ /locus_tag="SARI_04267"
+ CDS 4192194..4192397
+ /locus_tag="SARI_04267"
+ /inference="protein motif:HMMPfam:IPR012451"
+ /inference="similar to AA sequence:INSD:ABB67649.1"
+ /note="membrane protein AaeX; the gene is a member of the
+ aaeXAB operon"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573192.1"
+ /db_xref="GI:161506080"
+ /db_xref="InterPro:IPR012451"
+ /translation="MSLFPVIVVFGLSFPPIFFELLLSLAIFWLVRRVLVPTGIYDFV
+ WHPALFNTALYCCLFYLISRLFV"
+ misc_feature 4192194..4192394
+ /locus_tag="SARI_04267"
+ /note="efflux system membrane protein; Provisional;
+ Region: PRK11594"
+ /db_xref="CDD:183220"
+ gene 4192405..4193337
+ /locus_tag="SARI_04268"
+ CDS 4192405..4193337
+ /locus_tag="SARI_04268"
+ /inference="protein motif:HMMPfam:IPR006143"
+ /inference="protein motif:superfamily:IPR011053"
+ /inference="protein motif:superfamily:IPR011055"
+ /inference="similar to AA sequence:INSD:AAV79055.1"
+ /note="'with AaeB forms an efflux pump whose substrates
+ are p-hydroxybenzoic acid, 6-hydroxy-2-naphthoic and
+ 2-hydroxycinnamate'"
+ /codon_start=1
+ /transl_table=11
+ /product="p-hydroxybenzoic acid efflux subunit AaeA"
+ /protein_id="YP_001573193.1"
+ /db_xref="GI:161506081"
+ /db_xref="InterPro:IPR006143"
+ /db_xref="InterPro:IPR011053"
+ /db_xref="InterPro:IPR011055"
+ /translation="MKTLTRKLSRTAITLVLVILAFIAIFRAWVYYTESPWTRDARFS
+ ADVVAIAPDVAGLITHVNVHDNQLVQKDQVLFTIDQPRYQKALAEAEADVAYYQVLAQ
+ EKRQEAGRRNRLGVQAMSREEIDQANNVLQTVLHQLAKAQATRDLAKLDLERTVIRAP
+ ADGWVTNLNVYAGEFITRGSTAVALVKKNSFYVQAYMEETKLEGVRPGYRAEITPLGS
+ NRVLKGTVDSVAAGVTNTSSTSDAKGMATIDSNLEWVRLAQRVPVRIRLDEQQGNLWP
+ AGTTATVVITGKQDRDASQDSFFRKLAHRLREFG"
+ misc_feature 4192405..4193334
+ /locus_tag="SARI_04268"
+ /note="p-hydroxybenzoic acid efflux subunit AaeA;
+ Provisional; Region: PRK10559"
+ /db_xref="CDD:182548"
+ misc_feature 4192540..4192689
+ /locus_tag="SARI_04268"
+ /note="Biotin-lipoyl like; Region: Biotin_lipoyl_2;
+ pfam13533"
+ /db_xref="CDD:205711"
+ misc_feature 4192870..4193175
+ /locus_tag="SARI_04268"
+ /note="HlyD family secretion protein; Region: HlyD_3;
+ pfam13437"
+ /db_xref="CDD:222128"
+ gene 4193343..4195310
+ /locus_tag="SARI_04269"
+ CDS 4193343..4195310
+ /locus_tag="SARI_04269"
+ /inference="protein motif:HMMPfam:IPR006726"
+ /note="with AaeA forms an efflux pump whose substrates are
+ p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and
+ 2-hydroxycinnamate"
+ /codon_start=1
+ /transl_table=11
+ /product="p-hydroxybenzoic acid efflux subunit AaeB"
+ /protein_id="YP_001573194.1"
+ /db_xref="GI:161506082"
+ /db_xref="InterPro:IPR006726"
+ /translation="MGVFSIANQHIRFAVKLACAIVLALFIGFHFQLETPRWAVLTAA
+ IVAAGPAFAAGGEPYSGAIRYRGMLRIIGTFIGCIAALIIIISMIRAPLLMILVCCVW
+ AGFCTWISSLVRIENSYAWGLSGYTALIIVITIQTEPLLTPQFALERCSEIVIGIGCA
+ ILADLLFSPRSIKQEVDRELDSLLVAQYQLMQLCIKHGDSEEVDNAWGDLVRRTAALE
+ GMRSNLNMESSRWVRANRRLKALNTLSLTLITQSCETYLIQNTRPELITDTFRELFET
+ PVETVQDVHRQLKRMRRVIVWTGERETPVTLYSWVGAATRYLLLKRGVISNTKISATE
+ EEILQGEPVVKVESAERHHAMVNFWRTTLSCVLGTLFWLWTGWTSGNGAMVMIAVVTS
+ LAMRLPNPRMVCIDFIYGTLAALPLGLLYFLVIIPNTQQSMLLLCLSLAVLGFFIGIE
+ VQKRRLGSMGALASTINIIVLDNPMTFHFSQFLDSALGQIVGCMLAFIVILLVRDKSK
+ DRTGRVLLNQFVSAAVSAMTTNAARRKENRLPALYQQLFLLMNKFPGDLPKFRLALTM
+ IIAHQRLRDAPIPVNEDLSVFHRQLRRTADHVISAGNDDKRRRYFGQLLDELDIYQEK
+ LRIWEAPPQVTEPVKRLTGMLHKYQNALTDS"
+ misc_feature 4193349..4195304
+ /locus_tag="SARI_04269"
+ /note="p-hydroxybenzoic acid efflux subunit AaeB;
+ Provisional; Region: PRK10631"
+ /db_xref="CDD:182600"
+ misc_feature 4193409..4193831
+ /locus_tag="SARI_04269"
+ /note="Fusaric acid resistance protein-like; Region:
+ FUSC_2; pfam13515"
+ /db_xref="CDD:222189"
+ gene 4195482..4195754
+ /locus_tag="SARI_04270"
+ CDS 4195482..4195754
+ /locus_tag="SARI_04270"
+ /inference="similar to AA sequence:INSD:AAL22232.1"
+ /note="'COG: COG2732 Barstar, RNAse (barnase) inhibitor;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573195.1"
+ /db_xref="GI:161506083"
+ /translation="MNVYTFDFDDIKNQSDFYREFTQTFGLASEKVSDLDSLWDAVIS
+ DVLPLPLEIEFVHLPDKLRRRYGALILLFDEAEEELEGRLRFNVRH"
+ misc_feature 4195491..4195745
+ /locus_tag="SARI_04270"
+ /note="Barstar is an intracellular inhibitor of barnase,
+ an extracellular ribonuclease of Bacillus
+ amyloliquefaciens. Barstar binds tightly to the barnase
+ active site and sterically blocks it thus inhibiting its
+ potentially lethal RNase activity inside the cell; Region:
+ Barstar; cd05142"
+ /db_xref="CDD:240165"
+ misc_feature order(4195569..4195571,4195575..4195577,4195581..4195589,
+ 4195599..4195601,4195710..4195712)
+ /locus_tag="SARI_04270"
+ /note="RNAase interaction site [polypeptide binding];
+ other site"
+ /db_xref="CDD:240165"
+ gene complement(4195814..4196080)
+ /locus_tag="SARI_04271"
+ CDS complement(4195814..4196080)
+ /locus_tag="SARI_04271"
+ /inference="protein motif:HMMPfam:IPR010854"
+ /inference="similar to AA sequence:INSD:AAL22231.1"
+ /note="'COG: NOG30709 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573196.1"
+ /db_xref="GI:161506084"
+ /db_xref="InterPro:IPR010854"
+ /translation="MKTKYIIASLGLATLLSFGANAAVHQVNAEQAKNLQPMGTISVS
+ QIGSTPMDMRQELVAKAEKAGANSYRIIELNEGDNWHATAELYK"
+ misc_feature complement(4195817..4195978)
+ /locus_tag="SARI_04271"
+ /note="Protein of unknown function (DUF1471); Region:
+ DUF1471; pfam07338"
+ /db_xref="CDD:219380"
+ gene complement(4196184..4196447)
+ /locus_tag="SARI_04272"
+ CDS complement(4196184..4196447)
+ /locus_tag="SARI_04272"
+ /inference="protein motif:HMMPfam:IPR010854"
+ /inference="similar to AA sequence:REFSEQ:NP_806951.1"
+ /note="'COG: NOG12178 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573197.1"
+ /db_xref="GI:161506085"
+ /db_xref="InterPro:IPR010854"
+ /translation="MKIKTTIATLSILSVLSFGAFAAEPISAEQAQNREAIGSVSVSA
+ IGSSPMDMNAMLSKKADKQGATAYHITEARSGSHWHATAELYK"
+ misc_feature complement(4196187..>4196303)
+ /locus_tag="SARI_04272"
+ /note="Protein of unknown function (DUF1471); Region:
+ DUF1471; pfam07338"
+ /db_xref="CDD:219380"
+ gene complement(4196813..4197283)
+ /locus_tag="SARI_04273"
+ CDS complement(4196813..4197283)
+ /locus_tag="SARI_04273"
+ /inference="protein motif:BlastProDom:IPR001669"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR001669"
+ /inference="protein motif:HMMTigr:IPR001669"
+ /inference="protein motif:superfamily:IPR001669"
+ /inference="similar to AA sequence:INSD:AAV79050.1"
+ /note="regulates arginine biosynthesis when complexed with
+ arginine by binding at site that overlap the promotors of
+ the arginine biosynthesis genes"
+ /codon_start=1
+ /transl_table=11
+ /product="arginine repressor"
+ /protein_id="YP_001573198.1"
+ /db_xref="GI:161506086"
+ /db_xref="InterPro:IPR001669"
+ /db_xref="InterPro:IPR011991"
+ /translation="MRSSAKQEELVRAFKALLKEEKFSSQGEIVVALQDQGFENINQS
+ KVSRMLTKFGAVRTRNAKMEMVYCLPAELGVPTTSSPLKNLVLDIDYNDAVVVIHTSP
+ GAAQLIARLLDSLGKAEGILGTIAGDDTIFTTPASGFSVRDLYEAILELFEQEL"
+ misc_feature complement(4196816..4197283)
+ /locus_tag="SARI_04273"
+ /note="arginine repressor; Provisional; Region: PRK05066"
+ /db_xref="CDD:179922"
+ misc_feature complement(4197059..4197271)
+ /locus_tag="SARI_04273"
+ /note="Arginine repressor, DNA binding domain; Region:
+ Arg_repressor; pfam01316"
+ /db_xref="CDD:201725"
+ misc_feature complement(4196831..4197034)
+ /locus_tag="SARI_04273"
+ /note="Arginine repressor, C-terminal domain; Region:
+ Arg_repressor_C; pfam02863"
+ /db_xref="CDD:202435"
+ gene 4197698..4198636
+ /locus_tag="SARI_04274"
+ CDS 4197698..4198636
+ /locus_tag="SARI_04274"
+ /inference="protein motif:Gene3D:IPR001236"
+ /inference="protein motif:HMMPanther:IPR010097"
+ /inference="protein motif:HMMPfam:IPR001236"
+ /inference="protein motif:HMMPIR:IPR001557"
+ /inference="protein motif:HMMTigr:IPR010097"
+ /inference="protein motif:ScanRegExp:IPR001252"
+ /inference="similar to AA sequence:INSD:AAV79049.1"
+ /note="oxidizes malate to oxaloacetate"
+ /codon_start=1
+ /transl_table=11
+ /product="malate dehydrogenase"
+ /protein_id="YP_001573199.1"
+ /db_xref="GI:161506087"
+ /db_xref="InterPro:IPR001236"
+ /db_xref="InterPro:IPR001252"
+ /db_xref="InterPro:IPR001557"
+ /db_xref="InterPro:IPR010097"
+ /translation="MKVAVLGAAGGIGQALALLLKNQLPSGSELSLYDIAPVTPGVAV
+ DLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLV
+ QQIAKTCPKACVGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAE
+ LKGKLPTEVEVPVIGGHSGVTILPLLSQIPGVSFTEQEAADLTKRIQNAGTEVVEAKA
+ GGGSATLSMGQAAARFGLSLVRALQGETGVVECAYVEGDGQYARFFSQPLLLGKNGVE
+ ERKSIGTLSAFEQRSLEGMLDTLKKDITLGEEFVTK"
+ misc_feature 4197698..4198633
+ /locus_tag="SARI_04274"
+ /note="malate dehydrogenase; Provisional; Region:
+ PRK05086"
+ /db_xref="CDD:235340"
+ misc_feature 4197779..4198627
+ /locus_tag="SARI_04274"
+ /note="Glyoxysomal and mitochondrial malate
+ dehydrogenases; Region: MDH_glyoxysomal_mitochondrial;
+ cd01337"
+ /db_xref="CDD:133422"
+ misc_feature order(4197797..4197799,4197923..4197925,4197929..4197934,
+ 4197965..4197967,4197977..4197979,4197986..4197988,
+ 4198046..4198048,4198052..4198054,4198133..4198135,
+ 4198142..4198144,4198226..4198228,4198364..4198366,
+ 4198376..4198378)
+ /locus_tag="SARI_04274"
+ /note="NAD binding site [chemical binding]; other site"
+ /db_xref="CDD:133422"
+ misc_feature order(4197827..4197832,4197836..4197844,4198151..4198156,
+ 4198163..4198165,4198322..4198324,4198331..4198333,
+ 4198343..4198348,4198364..4198375,4198382..4198384)
+ /locus_tag="SARI_04274"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:133422"
+ misc_feature order(4197938..4197940,4197956..4197958,4198052..4198054,
+ 4198154..4198156,4198226..4198228,4198325..4198327)
+ /locus_tag="SARI_04274"
+ /note="Substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:133422"
+ unsure 4198457..4198527
+ /locus_tag="SARI_04274"
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(4198713..4199780)
+ /locus_tag="SARI_04275"
+ CDS complement(4198713..4199780)
+ /locus_tag="SARI_04275"
+ /inference="protein motif:HMMPfam:IPR001254"
+ /inference="protein motif:HMMPfam:IPR001478"
+ /inference="protein motif:HMMSmart:IPR001478"
+ /inference="protein motif:HMMTigr:IPR011783"
+ /inference="protein motif:superfamily:IPR001478"
+ /inference="protein motif:superfamily:IPR009003"
+ /inference="similar to AA sequence:INSD:CAD07865.1"
+ /note="'KEGG: sty:STY3529 1.2e-181 degS; serine protease
+ K04691;
+ COG: COG0265 Trypsin-like serine proteases, typically
+ periplasmic, contain C-terminal PDZ domain;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="serine endoprotease"
+ /protein_id="YP_001573200.1"
+ /db_xref="GI:161506088"
+ /db_xref="InterPro:IPR001254"
+ /db_xref="InterPro:IPR001478"
+ /db_xref="InterPro:IPR009003"
+ /db_xref="InterPro:IPR011783"
+ /translation="MFVKLLRSVAIGLIVGAILLAVMPSLRKINPIAVPQFDSTDETP
+ TSYNFAVRRAAPAVVNVYNRSMNSTAHNQLEIRTLGSGVIMDQRGYIITNKHVINDAD
+ QIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINTKRTPHIGDVVLAIGN
+ PYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTL
+ SFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGSGM
+ DPIQGIVVNEVTPNGPAALAGIQVNDLIISVNNKPAVSALETMDQVAEIRPGSVIPVV
+ VMRDDKQLTFQVTVQEYPATN"
+ misc_feature complement(4198719..4199780)
+ /locus_tag="SARI_04275"
+ /note="serine endoprotease; Provisional; Region: PRK10898"
+ /db_xref="CDD:182820"
+ misc_feature complement(4199136..4199543)
+ /locus_tag="SARI_04275"
+ /note="Trypsin-like peptidase domain; Region: Trypsin_2;
+ pfam13365"
+ /db_xref="CDD:222077"
+ misc_feature complement(4198743..4198979)
+ /locus_tag="SARI_04275"
+ /note="PDZ domain of tryspin-like serine proteases, such
+ as DegP/HtrA, which are oligomeric proteins involved in
+ heat-shock response, chaperone function, and apoptosis.
+ May be responsible for substrate recognition and/or
+ binding, as most PDZ domains bind...; Region:
+ PDZ_serine_protease; cd00987"
+ /db_xref="CDD:238487"
+ gene complement(4199873..4201240)
+ /locus_tag="SARI_04276"
+ CDS complement(4199873..4201240)
+ /locus_tag="SARI_04276"
+ /inference="protein motif:HMMPfam:IPR001254"
+ /inference="protein motif:HMMPfam:IPR001478"
+ /inference="protein motif:HMMSmart:IPR001478"
+ /inference="protein motif:HMMTigr:IPR011782"
+ /inference="protein motif:superfamily:IPR001478"
+ /inference="protein motif:superfamily:IPR009003"
+ /inference="similar to AA sequence:INSD:AAV79039.1"
+ /note="'KEGG: spt:SPA3215 5.4e-227 degQ; serine protease
+ K04772;
+ COG: COG0265 Trypsin-like serine proteases, typically
+ periplasmic, contain C-terminal PDZ domain;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="serine endoprotease"
+ /protein_id="YP_001573201.1"
+ /db_xref="GI:161506089"
+ /db_xref="InterPro:IPR001254"
+ /db_xref="InterPro:IPR001478"
+ /db_xref="InterPro:IPR009003"
+ /db_xref="InterPro:IPR011782"
+ /translation="MKKHTQLLSALALSVGLTLSTPFPALASIPGQVPGQAALPSLAP
+ MLEKVLPAVVSVKVEGTATQSQKVPEEFKKFFGEELPDQPSQPFEGLGSGVIIDAAKG
+ YVLTNNHVINQAQKISIQLNDGREFDAKLIGGDDQSDIALLQIQNPSQLTQIAIADSD
+ KLRVGDFAVAVGNPFGLGQTATSGIISALGRSGLNLEGLENFIQTDASINRGNSGGAL
+ LNVNGELIGINTAILAPGGGSIGIGFAIPSNMAQTLAQQLIQFGEIKRGLLGIKGTEM
+ TADIAKAFKLNVQRGAFVSEVLPNSGSAKAGVKSGDVIISLNGKPLNSFAELRSRIAT
+ TEPGTKVKLGLLRGGKPLEVEVTLDSNTSSSASAEMIAPALQGATLSDGQLKDGTKGV
+ KIDSVEKSSPAAQAGLQKDDVIIGVNRDRIRSIAEMRKVMAAKASIIALQVIRGNENI
+ YLLLR"
+ misc_feature complement(4199876..4201240)
+ /locus_tag="SARI_04276"
+ /note="serine endoprotease; Provisional; Region: PRK10139"
+ /db_xref="CDD:182262"
+ misc_feature complement(4200557..4200967)
+ /locus_tag="SARI_04276"
+ /note="Trypsin-like peptidase domain; Region: Trypsin_2;
+ pfam13365"
+ /db_xref="CDD:222077"
+ misc_feature complement(4200173..4200442)
+ /locus_tag="SARI_04276"
+ /note="PDZ domain of tryspin-like serine proteases, such
+ as DegP/HtrA, which are oligomeric proteins involved in
+ heat-shock response, chaperone function, and apoptosis.
+ May be responsible for substrate recognition and/or
+ binding, as most PDZ domains bind...; Region:
+ PDZ_serine_protease; cd00987"
+ /db_xref="CDD:238487"
+ misc_feature complement(order(4200254..4200259,4200266..4200271,
+ 4200422..4200424,4200428..4200439))
+ /locus_tag="SARI_04276"
+ /note="protein binding site [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238487"
+ misc_feature complement(4199885..4200103)
+ /locus_tag="SARI_04276"
+ /note="PDZ domain of tryspin-like serine proteases, such
+ as DegP/HtrA, which are oligomeric proteins involved in
+ heat-shock response, chaperone function, and apoptosis.
+ May be responsible for substrate recognition and/or
+ binding, as most PDZ domains bind...; Region:
+ PDZ_serine_protease; cd00987"
+ /db_xref="CDD:238487"
+ gene complement(4201396..4201800)
+ /locus_tag="SARI_04277"
+ CDS complement(4201396..4201800)
+ /locus_tag="SARI_04277"
+ /inference="protein motif:HMMPfam:IPR009386"
+ /inference="similar to AA sequence:INSD:AAX67191.1"
+ /note="'KEGG: eco:b3233 8.4e-64 yhcB; hypothetical protein
+ K00424;
+ COG: COG3105 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="cytochrome d ubiquinol oxidase subunit III"
+ /protein_id="YP_001573202.1"
+ /db_xref="GI:161506090"
+ /db_xref="InterPro:IPR009386"
+ /translation="MFMTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNK
+ AELEEYREELVSHFARSAELLDTMAHDYRQLYQHMAKSSSSLLPEMSAESNPFRNRLA
+ ESEASNDQAPVQMPRDYSEGASGLLRNGAKRD"
+ misc_feature complement(4201399..4201800)
+ /locus_tag="SARI_04277"
+ /note="Uncharacterized protein conserved in bacteria
+ [Function unknown]; Region: COG3105"
+ /db_xref="CDD:225647"
+ misc_feature complement(4201399..4201794)
+ /locus_tag="SARI_04277"
+ /note="hypothetical protein; Provisional; Region:
+ PRK11677"
+ /db_xref="CDD:236953"
+ gene 4201987..4203111
+ /locus_tag="SARI_04278"
+ CDS 4201987..4203111
+ /locus_tag="SARI_04278"
+ /inference="protein motif:HMMPanther:IPR005654"
+ /inference="protein motif:HMMPfam:IPR005654"
+ /inference="similar to AA sequence:REFSEQ:YP_152349.1"
+ /note="'KEGG: reh:H16_A2322 7.0e-76 ATPase K01529;
+ COG: COG1485 Predicted ATPase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573203.1"
+ /db_xref="GI:161506091"
+ /db_xref="InterPro:IPR005654"
+ /translation="MQIFSPTSRYLQALNEGTHQPDDVQKEAANRLEIIYQELTAKKS
+ PATPSGGLIARLGKLLGKNEPDAQIPVRGLYMWGGVGRGKTWLMDLFYHSLPGERKLR
+ LHFHRFMLRVHEELTALQGQSDPLDTIADRFKAGTDVLCFDEFFVSDITDAMLLGGLM
+ KALFARGITLVATSNIPPDELYRNGLQRARFLPAIDAIKQHCDIMNVDAGVDYRLRTL
+ TQAHLWLTPLNDETRRQMDKLWLALAGARREHVPTLEINHRPLSTLGVENQTLAVSFA
+ TLCVEARSQHDYIALSRLFHTVLLFDVPVMTPLMESEARRFIALVDEFYERHVKLVVN
+ AAAPLYEIYQGERLKFEFQRCLSRLQEMQSEEYLKREHMP"
+ misc_feature 4201987..4203105
+ /locus_tag="SARI_04278"
+ /note="Predicted ATPase [General function prediction
+ only]; Region: COG1485"
+ /db_xref="CDD:224402"
+ gene 4203412..4203840
+ /gene="rplM"
+ /locus_tag="SARI_04279"
+ CDS 4203412..4203840
+ /gene="rplM"
+ /locus_tag="SARI_04279"
+ /inference="protein motif:BlastProDom:IPR005822"
+ /inference="protein motif:HMMPfam:IPR005822"
+ /inference="protein motif:HMMTigr:IPR005823"
+ /inference="protein motif:ScanRegExp:IPR005822"
+ /inference="protein motif:superfamily:IPR005822"
+ /inference="similar to AA sequence:INSD:ABJ02714.1"
+ /note="in Escherichia coli this protein is one of the
+ earliest assembly proteins in the large subunit"
+ /codon_start=1
+ /transl_table=11
+ /product="50S ribosomal protein L13"
+ /protein_id="YP_001573204.1"
+ /db_xref="GI:161506092"
+ /db_xref="InterPro:IPR005822"
+ /db_xref="InterPro:IPR005823"
+ /translation="MKTFTAKPETVKRDWYVVDATGKTLGRLATELARRLRGKHKAEY
+ TPHVDTGDYIIVLNADKVAVTGNKRTDKVYYHHTGHIGGIKQATFEEMIARRPERVIE
+ IAVKGMLPKGPLGRAMFRKLKVYAGNEHNHAAQQPQVLDI"
+ misc_feature 4203454..4203795
+ /gene="rplM"
+ /locus_tag="SARI_04279"
+ /note="Ribosomal protein L13. Protein L13, a large
+ ribosomal subunit protein, is one of five proteins
+ required for an early folding intermediate of 23S rRNA in
+ the assembly of the large subunit. L13 is situated on the
+ bottom of the large subunit, near the...; Region:
+ Ribosomal_L13; cd00392"
+ /db_xref="CDD:238230"
+ misc_feature order(4203481..4203483,4203487..4203492,4203499..4203501,
+ 4203508..4203510,4203520..4203522,4203604..4203606,
+ 4203610..4203612,4203694..4203699,4203715..4203723,
+ 4203727..4203735,4203739..4203747,4203751..4203753,
+ 4203757..4203759,4203769..4203771,4203778..4203783)
+ /gene="rplM"
+ /locus_tag="SARI_04279"
+ /note="23S rRNA interface [nucleotide binding]; other
+ site"
+ /db_xref="CDD:238230"
+ misc_feature 4203697..4203699
+ /gene="rplM"
+ /locus_tag="SARI_04279"
+ /note="L3 interface [polypeptide binding]; other site"
+ /db_xref="CDD:238230"
+ gene 4203856..4204248
+ /gene="rpsI"
+ /locus_tag="SARI_04280"
+ CDS 4203856..4204248
+ /gene="rpsI"
+ /locus_tag="SARI_04280"
+ /inference="protein motif:BlastProDom:IPR000754"
+ /inference="protein motif:HMMPfam:IPR000754"
+ /inference="protein motif:ScanRegExp:IPR000754"
+ /inference="similar to AA sequence:INSD:AAO70795.1"
+ /note="forms a direct contact with the tRNA during
+ translation"
+ /codon_start=1
+ /transl_table=11
+ /product="30S ribosomal protein S9"
+ /protein_id="YP_001573205.1"
+ /db_xref="GI:161506093"
+ /db_xref="InterPro:IPR000754"
+ /translation="MAENQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETA
+ RMVVRQPLELVDMVEKLDLYITVKGGGISGQAGAIRHGITRALMEYDESLRGELRKAG
+ FVTRDARQVERKKVGLRKARRRPQFSKR"
+ misc_feature 4203856..4204245
+ /gene="rpsI"
+ /locus_tag="SARI_04280"
+ /note="30S ribosomal protein S9; Reviewed; Region: rpsI;
+ PRK00132"
+ /db_xref="CDD:178888"
+ gene complement(4204410..4204562)
+ /locus_tag="SARI_04282"
+ CDS complement(4204410..4204562)
+ /locus_tag="SARI_04282"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573206.1"
+ /db_xref="GI:161506095"
+ /translation="MKTSRYIQNFYCYQPQRDQPDIMLPKAKKVIIVQKRDKNERSPL
+ FGQKIG"
+ gene 4204561..4205199
+ /gene="sspA"
+ /locus_tag="SARI_04281"
+ CDS 4204561..4205199
+ /gene="sspA"
+ /locus_tag="SARI_04281"
+ /inference="protein motif:Gene3D:IPR012335"
+ /inference="protein motif:HMMPfam:IPR004045"
+ /inference="protein motif:HMMPfam:IPR004046"
+ /inference="protein motif:superfamily:IPR010987"
+ /inference="protein motif:superfamily:IPR012336"
+ /inference="similar to AA sequence:INSD:AAL22211.1"
+ /note="transcriptional activator; required for activation
+ of bacteriophage P1 late promoter; induced by starvation"
+ /codon_start=1
+ /transl_table=11
+ /product="stringent starvation protein A"
+ /protein_id="YP_001573207.1"
+ /db_xref="GI:161506094"
+ /db_xref="InterPro:IPR004045"
+ /db_xref="InterPro:IPR004046"
+ /db_xref="InterPro:IPR010987"
+ /db_xref="InterPro:IPR012335"
+ /db_xref="InterPro:IPR012336"
+ /translation="MAVAANKRSVMTLFSGPTDIYSHQVRIVLAEKGVSFEIEHVEKD
+ NPPQDLIDLNPNQSVPTLVDRELTLWESRIIMEYLDERFPHPPLMPVYPVARGESRLY
+ MHRIEKDWYTLMNVIVNGSASEADSARKQLREELLAIAPVFGQKPYFLSDEFSLVDCY
+ LAPLLWRLPQLGIEFSGAGAKELKGYMTRVFERDSFLASLTEAEREMRLGRG"
+ misc_feature 4204561..4205193
+ /gene="sspA"
+ /locus_tag="SARI_04281"
+ /note="stringent starvation protein A; Provisional;
+ Region: sspA; PRK09481"
+ /db_xref="CDD:236537"
+ misc_feature 4204591..4204809
+ /gene="sspA"
+ /locus_tag="SARI_04281"
+ /note="GST_N family, Stringent starvation protein A (SspA)
+ subfamily; SspA is a RNA polymerase (RNAP)-associated
+ protein required for the lytic development of phage P1 and
+ for stationary phase-induced acid tolerance of E. coli. It
+ is implicated in survival...; Region: GST_N_SspA; cd03059"
+ /db_xref="CDD:239357"
+ misc_feature order(4204609..4204614,4204621..4204623,4204627..4204632,
+ 4204636..4204641,4204648..4204653,4204777..4204779,
+ 4204786..4204791)
+ /gene="sspA"
+ /locus_tag="SARI_04281"
+ /note="C-terminal domain interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:239357"
+ misc_feature order(4204621..4204623,4204732..4204740,4204771..4204776)
+ /gene="sspA"
+ /locus_tag="SARI_04281"
+ /note="putative GSH binding site (G-site) [chemical
+ binding]; other site"
+ /db_xref="CDD:239357"
+ misc_feature order(4204726..4204728,4204759..4204764,4204777..4204779,
+ 4204789..4204791,4204801..4204803)
+ /gene="sspA"
+ /locus_tag="SARI_04281"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:239357"
+ misc_feature 4204837..4205160
+ /gene="sspA"
+ /locus_tag="SARI_04281"
+ /note="C-terminal, alpha helical domain of Stringent
+ starvation protein A; Region: GST_C_SspA; cd03186"
+ /db_xref="CDD:198295"
+ misc_feature order(4204846..4204848,4204852..4204854,4204858..4204863,
+ 4204873..4204875,4204885..4204887)
+ /gene="sspA"
+ /locus_tag="SARI_04281"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:198295"
+ misc_feature order(4204858..4204860,4204891..4204893,4205035..4205040,
+ 4205047..4205049,4205059..4205061,4205137..4205139,
+ 4205143..4205145,4205155..4205157)
+ /gene="sspA"
+ /locus_tag="SARI_04281"
+ /note="N-terminal domain interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:198295"
+ gene 4205205..4205705
+ /locus_tag="SARI_04283"
+ CDS 4205205..4205705
+ /locus_tag="SARI_04283"
+ /inference="protein motif:HMMPfam:IPR007481"
+ /inference="protein motif:HMMPIR:IPR007481"
+ /inference="similar to AA sequence:INSD:AAL22210.1"
+ /note="'COG: COG2969 Stringent starvation protein B;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="ClpXP protease specificity-enhancing factor"
+ /protein_id="YP_001573208.1"
+ /db_xref="GI:161506096"
+ /db_xref="InterPro:IPR007481"
+ /translation="MDLSQLTPRRPYLLRAFYEWLLDNQLTPHLVVDVMLPGVHVPME
+ YARDGQIVLNIAPRAVGNLELSNDEVRFNARFGGVPRQVSVPLAAVLAIYARENGAGT
+ MFEPEAAYDEGVVSLNDDDQTAGAESETVMSVIDGDKPDHDDDSSPDDEPPPPRGGRP
+ ALRVVK"
+ misc_feature 4205208..4205597
+ /locus_tag="SARI_04283"
+ /note="Stringent starvation protein B [General function
+ prediction only]; Region: SspB; COG2969"
+ /db_xref="CDD:225517"
+ gene 4205815..4206606
+ /locus_tag="SARI_04284"
+ CDS 4205815..4206606
+ /locus_tag="SARI_04284"
+ /inference="protein motif:Gene3D:IPR000524"
+ /inference="protein motif:HMMPfam:IPR000524"
+ /inference="protein motif:HMMPfam:IPR011711"
+ /inference="protein motif:HMMSmart:IPR000524"
+ /inference="similar to AA sequence:INSD:AAV79032.1"
+ /note="Transcriptional repressor of the nan operon that
+ encodes proteins involved in sialic acid utilization"
+ /codon_start=1
+ /transl_table=11
+ /product="transcriptional regulator NanR"
+ /protein_id="YP_001573209.1"
+ /db_xref="GI:161506097"
+ /db_xref="InterPro:IPR000524"
+ /db_xref="InterPro:IPR011711"
+ /translation="MDVMNAFDSQAEDSPLTIGHSLRRRPLARKKLSEMVEEELEQMI
+ RRHEFGEGEQLPSERELMAFFNVGRPSVREALAALKRKGLVQINNGERARVSRPSADT
+ IISELSGMAKDFLTHPGGIAHFEQLRLFFESSLVRYAAEHATDEQIALLTKALEINSQ
+ SLDDNALFIRSDVEFHRVLAEIPGNPIFMAIHVALLDWLIAARPSVPDRELHEHNNVS
+ YQQHIVIVDAIRQRDPDKADRALQTHLNSVSATWHAFGKKSQKTR"
+ misc_feature 4205869..4206594
+ /locus_tag="SARI_04284"
+ /note="transcriptional regulator NanR; Provisional;
+ Region: PRK03837"
+ /db_xref="CDD:235166"
+ misc_feature 4205905..4206102
+ /locus_tag="SARI_04284"
+ /note="Winged helix-turn-helix (WHTH) DNA-binding domain
+ of the GntR family of transcriptional regulators; Region:
+ WHTH_GntR; cd07377"
+ /db_xref="CDD:153418"
+ misc_feature order(4205905..4205907,4205911..4205913,4205980..4205982,
+ 4205986..4205991,4206013..4206027,4206031..4206036,
+ 4206043..4206045,4206073..4206078,4206082..4206093)
+ /locus_tag="SARI_04284"
+ /note="DNA-binding site [nucleotide binding]; DNA binding
+ site"
+ /db_xref="CDD:153418"
+ misc_feature 4206190..4206555
+ /locus_tag="SARI_04284"
+ /note="FCD domain; Region: FCD; pfam07729"
+ /db_xref="CDD:219539"
+ gene 4206741..4207634
+ /locus_tag="SARI_04285"
+ CDS 4206741..4207634
+ /locus_tag="SARI_04285"
+ /inference="protein motif:BlastProDom:IPR002220"
+ /inference="protein motif:FPrintScan:IPR002220"
+ /inference="protein motif:Gene3D:IPR013785"
+ /inference="protein motif:HMMPfam:IPR002220"
+ /inference="protein motif:HMMPIR:IPR002220"
+ /inference="protein motif:HMMTigr:IPR005264"
+ /inference="protein motif:ScanRegExp:IPR002220"
+ /inference="similar to AA sequence:SwissProt:Q8ZLQ6"
+ /note="catalyzes the formation of pyruvate and
+ N-acetylmannosamine from N-acetylneuraminic acid"
+ /codon_start=1
+ /transl_table=11
+ /product="N-acetylneuraminate lyase"
+ /protein_id="YP_001573210.1"
+ /db_xref="GI:161506098"
+ /db_xref="InterPro:IPR002220"
+ /db_xref="InterPro:IPR005264"
+ /db_xref="InterPro:IPR013785"
+ /translation="MAKALQGVMAALLTPFDHQQQLDSESLRRLVRFNIEQGIDGLYV
+ GGSTGEAFVQSLAEREQVLEIVAEEAKGKITLIAHVGTVSTAGSQQLASAAKRYGFDA
+ VSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPG
+ VSALKQTSGDLFQMEQIRRAHPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQ
+ GIVQALREGDVAKAQRLQTECNKVIDLLIKTGVFRGLKTVLHYMDVVSVPLCRKPFAP
+ VDEKYLPELKALAQQLLEEKA"
+ misc_feature 4206744..4207589
+ /locus_tag="SARI_04285"
+ /note="N-acetylneuraminate lyase; Provisional; Region:
+ PRK04147"
+ /db_xref="CDD:179749"
+ misc_feature 4206753..4207589
+ /locus_tag="SARI_04285"
+ /note="N-Acetylneuraminic acid aldolase, also called
+ N-acetylneuraminate lyase (NAL); Region: NAL; cd00954"
+ /db_xref="CDD:188641"
+ misc_feature order(4206771..4206773,4206867..4206869,4206876..4206884,
+ 4207149..4207151,4207233..4207235)
+ /locus_tag="SARI_04285"
+ /note="inhibitor site; inhibition site"
+ /db_xref="CDD:188641"
+ misc_feature order(4206867..4206869,4206876..4206884,4207149..4207151,
+ 4207233..4207235,4207356..4207358)
+ /locus_tag="SARI_04285"
+ /note="active site"
+ /db_xref="CDD:188641"
+ misc_feature order(4206879..4206881,4206894..4206899,4206990..4206995,
+ 4207065..4207070,4207089..4207091,4207101..4207103,
+ 4207554..4207559)
+ /locus_tag="SARI_04285"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:188641"
+ misc_feature 4207233..4207235
+ /locus_tag="SARI_04285"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:188641"
+ gene 4207750..4209240
+ /locus_tag="SARI_04286"
+ CDS 4207750..4209240
+ /locus_tag="SARI_04286"
+ /inference="protein motif:HMMPfam:IPR011701"
+ /inference="protein motif:HMMTigr:IPR004742"
+ /inference="similar to AA sequence:SwissProt:P0A2G6"
+ /note="'KEGG: cal:orf19.6141 5.3e-05 HXT1; high-affinity
+ hexose (glucose) transporter K01804;
+ COG: COG0477 Permeases of the major facilitator
+ superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative sialic acid transporter"
+ /protein_id="YP_001573211.1"
+ /db_xref="GI:161506099"
+ /db_xref="InterPro:IPR004742"
+ /db_xref="InterPro:IPR011701"
+ /translation="MSTSTQNIPWYRHLNRAQWRAFSAAWLGYLLDGFDFVLIALVLT
+ EVQSEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVSSIILFSVGTLAC
+ GFAPGYTTMFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSVGAVVA
+ AQVYSLVVPVWGWRALFFIGILPIIFALWLRKNIPEAEDWKEKHEGKAPVRTMVDILY
+ RGEHRIINILMTFAAAAALWFCFAGNLQNAAIVAALGLLCAVIFISFMVQSSGKRWPT
+ GVMLMLVVLFAFLYSWPIQALLPTYLKTELAYDPHTVANVLFFSGFGAAVGCCVGGFL
+ GDWLGTRKAYVCSLLASQILIIPVFAIGGTNVWVLGLLLFFQQMLGQGIAGILPKLIG
+ GYFDTDQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTFVVILLI
+ GLDMPSRVQRWLRPEALRTHDAIDDKPFSGAVPFGSSKDAFVKTKS"
+ misc_feature 4207750..4209237
+ /locus_tag="SARI_04286"
+ /note="putative sialic acid transporter; Provisional;
+ Region: PRK03893"
+ /db_xref="CDD:179668"
+ misc_feature 4207813..>4208319
+ /locus_tag="SARI_04286"
+ /note="The Major Facilitator Superfamily (MFS) is a large
+ and diverse group of secondary transporters that includes
+ uniporters, symporters, and antiporters. MFS proteins
+ facilitate the transport across cytoplasmic or internal
+ membranes of a variety of...; Region: MFS; cd06174"
+ /db_xref="CDD:119392"
+ misc_feature order(4207855..4207857,4207864..4207872,4207876..4207881,
+ 4207930..4207932,4207939..4207944,4207951..4207953,
+ 4207963..4207968,4207972..4207977,4208113..4208118,
+ 4208125..4208130,4208137..4208142,4208149..4208151,
+ 4208185..4208190,4208197..4208202,4208218..4208220)
+ /locus_tag="SARI_04286"
+ /note="putative substrate translocation pore; other site"
+ /db_xref="CDD:119392"
+ gene 4209287..4209976
+ /locus_tag="SARI_04287"
+ CDS 4209287..4209976
+ /locus_tag="SARI_04287"
+ /inference="protein motif:HMMPfam:IPR007260"
+ /inference="similar to AA sequence:REFSEQ:YP_152341.1"
+ /note="Converts N-acetylmannosamine-6-phosphate to
+ N-acetylglucosamine-6-phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="N-acetylmannosamine-6-phosphate 2-epimerase"
+ /protein_id="YP_001573212.1"
+ /db_xref="GI:161506100"
+ /db_xref="InterPro:IPR007260"
+ /translation="MSLLEQLDKNIAASGGLIVSCQPVPGSPLDKPEIVAAMALAAEQ
+ AGAVAVRIEGIDNLRVARSLVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAGANII
+ AIDGTARQRPVTVEALLARIHHHHLLAMADCSSVDDGLACQRLGADIIGTTMSGYTTP
+ DTPEEPDLPLVKALHDAGCRVIAEGRYNSPELAAKAIRYGAWAVTVGSAITRLEYICG
+ WYNDALKKAAS"
+ misc_feature 4209287..4209967
+ /locus_tag="SARI_04287"
+ /note="Putative N-acetylmannosamine-6-phosphate epimerase
+ [Carbohydrate transport and metabolism]; Region: NanE;
+ COG3010"
+ /db_xref="CDD:225555"
+ misc_feature 4209287..4209946
+ /locus_tag="SARI_04287"
+ /note="N-acetylmannosamine-6-phosphate epimerase (NanE)
+ converts N-acetylmannosamine-6-phosphate to
+ N-acetylglucosamine-6-phosphate. This reaction is part of
+ the pathway that allows the usage of sialic acid as a
+ carbohydrate source. Sialic acids are a family of...;
+ Region: NanE; cd04729"
+ /db_xref="CDD:240080"
+ misc_feature order(4209344..4209346,4209350..4209352,4209437..4209439,
+ 4209500..4209502,4209506..4209508,4209599..4209601,
+ 4209680..4209682,4209743..4209745,4209755..4209757,
+ 4209836..4209844,4209905..4209907)
+ /locus_tag="SARI_04287"
+ /note="putative active site cavity [active]"
+ /db_xref="CDD:240080"
+ gene 4209973..4210848
+ /locus_tag="SARI_04288"
+ CDS 4209973..4210848
+ /locus_tag="SARI_04288"
+ /inference="protein motif:HMMPfam:IPR000600"
+ /inference="protein motif:ScanRegExp:IPR000600"
+ /inference="similar to AA sequence:SwissProt:Q8ZLQ8"
+ /note="catalyzes the phosphorylation of the
+ N-acetylmannosamine (ManNAc) liberated from
+ N-acetyl-neuraminic acid by the nanA protein"
+ /codon_start=1
+ /transl_table=11
+ /product="N-acetylmannosamine kinase"
+ /protein_id="YP_001573213.1"
+ /db_xref="GI:161506101"
+ /db_xref="InterPro:IPR000600"
+ /translation="MTTLAIDIGGTKLAAALIDKNLRISQRRELPTPGSKTPGALREA
+ LTALVEPLRTEAHQVAIASTGIIQEGMLLALNPHNLGGLLHFPLVQTLETITGLPTLA
+ VNDAQAAAWAEYHALPDDIRDMVFITVSTGVGGGVVCDGKLLTGKGGLAGHLGHTLAD
+ PHGPVCGCGRVGCVEAIASGRGMAAAARDDLAGCDAKTLFIRAGEGHQQARQLVRQSA
+ QVVARLVADVKVTTDCQCVVIGGSVGLAEGYLEQVRAFLMQEPAPYHVALSAARYRHD
+ AGLLGAALLAQGDTL"
+ misc_feature 4209973..4210845
+ /locus_tag="SARI_04288"
+ /note="N-acetylmannosamine kinase; Provisional; Region:
+ PRK05082"
+ /db_xref="CDD:235338"
+ misc_feature 4209982..>4210332
+ /locus_tag="SARI_04288"
+ /note="Nucleotide-Binding Domain of the sugar
+ kinase/HSP70/actin superfamily; Region:
+ NBD_sugar-kinase_HSP70_actin; cd00012"
+ /db_xref="CDD:212657"
+ misc_feature order(4209991..4210002,4210006..4210008,4210012..4210014,
+ 4210285..4210287)
+ /locus_tag="SARI_04288"
+ /note="nucleotide binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:212657"
+ gene 4210845..4211312
+ /locus_tag="SARI_04289"
+ CDS 4210845..4211312
+ /locus_tag="SARI_04289"
+ /inference="protein motif:HMMPfam:IPR004375"
+ /inference="protein motif:HMMTigr:IPR004375"
+ /inference="similar to AA sequence:INSD:AAL22204.1"
+ /note="'COG: COG2731 Beta-galactosidase, beta subunit;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573214.1"
+ /db_xref="GI:161506102"
+ /db_xref="InterPro:IPR004375"
+ /translation="MMMGEVQALPSCGLHPRLLDALTLALTARPQEKAPGRYELQGDN
+ IFMNVMQLTTQMPAEKKAELHEQYIDIQLLLTGAERIAFGMPGAARECEEMHVEEDYQ
+ LCNKIANEQTITLQAGMFAVFMPGEPHKPGCAVGEPDEIKKVVVKVRASLLAA"
+ misc_feature 4210845..4211303
+ /locus_tag="SARI_04289"
+ /note="Beta-galactosidase, beta subunit [Carbohydrate
+ transport and metabolism]; Region: EbgC; COG2731"
+ /db_xref="CDD:225345"
+ gene complement(4211439..4212719)
+ /locus_tag="SARI_04290"
+ CDS complement(4211439..4212719)
+ /locus_tag="SARI_04290"
+ /inference="protein motif:HMMPfam:IPR013108"
+ /inference="protein motif:superfamily:IPR011059"
+ /inference="similar to AA sequence:INSD:AAL22203.1"
+ /note="Catalyzes the deamination of cytosine to uracil and
+ ammonia"
+ /codon_start=1
+ /transl_table=11
+ /product="cytosine deaminase"
+ /protein_id="YP_001573215.1"
+ /db_xref="GI:161506103"
+ /db_xref="InterPro:IPR011059"
+ /db_xref="InterPro:IPR013108"
+ /translation="MQNNNITIRQARLQGHEGLWQITIENGRFSQIEPQETASLPQGE
+ VLDAEQGLAIPPFVEPHIHLDTTQTAGEPSWNQSGTLFEGIERWAERKAMLTHEDVKA
+ RAMQTLKWQMANGIQYVRTHVDVSDPTLTALKAMLEVKQEVAPWVDMQIVAFPQEGIL
+ SYPNGEALLEEALRLGADVIGAIPHFEFTREYGVESLHKIFALAQKYDRLIDVHCDEI
+ DDEQSRFVETVAALAHRDAMGARVTASHTTAMHSYNGAYASRLFRLLKMSGINFVANP
+ LVNIHLQGRFDTYPKRRGVTRVKEMLEAGINVCFGHDDVFDPWYPLGTANMLQVLHMG
+ LHVCQLMGYGQINDGLNLITTHSAKTLHLQDYGLSVGNSANLVILPAENGFDAVRRQT
+ SARYSIRHGRIIAETVPSQTTLHLSQPEAVTFKR"
+ misc_feature complement(4211442..4212719)
+ /locus_tag="SARI_04290"
+ /note="cytosine deaminase; Provisional; Region: PRK09230"
+ /db_xref="CDD:181713"
+ misc_feature complement(4211508..4212701)
+ /locus_tag="SARI_04290"
+ /note="Bacterial cytosine deaminase and related
+ metal-dependent hydrolases. Cytosine deaminases (CDs)
+ catalyze the deamination of cytosine, producing uracil and
+ ammonia. They play an important role in pyrimidine
+ salvage. CDs are present in prokaryotes and fungi; Region:
+ Bact_CD; cd01293"
+ /db_xref="CDD:238618"
+ misc_feature complement(order(4211781..4211783,4211982..4211984,
+ 4212069..4212071,4212078..4212080,4212531..4212533,
+ 4212537..4212539))
+ /locus_tag="SARI_04290"
+ /note="active site"
+ /db_xref="CDD:238618"
+ gene complement(4212706..4213983)
+ /gene="codB"
+ /locus_tag="SARI_04291"
+ CDS complement(4212706..4213983)
+ /gene="codB"
+ /locus_tag="SARI_04291"
+ /inference="protein motif:HMMPfam:IPR001248"
+ /inference="similar to AA sequence:REFSEQ:NP_462243.1"
+ /note="'KEGG: pae:PA2649 0.0024 nuoN; NADH dehydrogenase I
+ chain N K00343;
+ COG: COG1457 Purine-cytosine permease and related
+ proteins;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="cytosine permease"
+ /protein_id="YP_001573216.1"
+ /db_xref="GI:161506104"
+ /db_xref="InterPro:IPR001248"
+ /translation="MAKFQGGVVSQDNNYSQGPVPQAARKGVIPLTFVMLGLTFFSAS
+ MWTGGTLGTGLSYQDFFLAVLFGNLLLGIYTAFLGYIGAKTGLSTHLLARYSFGVKGS
+ WLPSLLLGGTQVGWFGVGVAMFSIPVSKATGIDANILIAVSGLLMTLTIFFGISALTI
+ LSIIAVPAIVILGSYSVWLAVSGVGGLEHLKTIVPQTPLDFSSALALVVGSFISAGTL
+ TADFVRFGRHAKSAVLIAMVAFFLGNSLMFIFGAAGAAAVGQADISDVMIAQGLLLPA
+ IVVLGLNIWTTNDNALYASGLGFANITGLSSRTLSVVNGIIGTVCALWLYNNFVGWLT
+ FLSSAIPPIGGVIIADYLLNRRRYADFNTARFIPVNWIAILSVASGIAAGHYVPGIVP
+ VNAVLGGVFSYILLNPLFKRSLAKSPEVSHAEQ"
+ misc_feature complement(4212748..4213953)
+ /gene="codB"
+ /locus_tag="SARI_04291"
+ /note="nucleobase-cation-symport-1 (NCS1) transporter
+ CobB-like; solute-binding domain; Region:
+ SLC-NCS1sbd_CobB-like; cd11484"
+ /db_xref="CDD:212053"
+ misc_feature complement(4212769..4213929)
+ /gene="codB"
+ /locus_tag="SARI_04291"
+ /note="Permease for cytosine/purines, uracil, thiamine,
+ allantoin; Region: Transp_cyt_pur; pfam02133"
+ /db_xref="CDD:216892"
+ misc_feature complement(order(4213123..4213128,4213135..4213137,
+ 4213864..4213866,4213873..4213875))
+ /gene="codB"
+ /locus_tag="SARI_04291"
+ /note="Na binding site [ion binding]; other site"
+ /db_xref="CDD:212053"
+ misc_feature complement(order(4213108..4213110,4213120..4213122,
+ 4213342..4213344,4213348..4213353,4213624..4213626,
+ 4213636..4213638,4213861..4213863))
+ /gene="codB"
+ /locus_tag="SARI_04291"
+ /note="putative substrate binding site [chemical binding];
+ other site"
+ /db_xref="CDD:212053"
+ gene complement(4214107..4215180)
+ /locus_tag="SARI_04292"
+ CDS complement(4214107..4215180)
+ /locus_tag="SARI_04292"
+ /inference="protein motif:HMMPfam:IPR009362"
+ /inference="similar to AA sequence:REFSEQ:YP_152336.1"
+ /note="'COG: COG4804 Uncharacterized conserved protein;
+ Psort location: cytoskeletal, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573217.1"
+ /db_xref="GI:161506105"
+ /db_xref="InterPro:IPR009362"
+ /translation="MTNPTLAPQSDEYQQIHDGIIRLVDTARTETVRSINAIMTATYW
+ EIGRRIVEFEQGGEARAAYGTQLIERLSVDLSQRYKRSFSTRNLWQIRTFYLCFQHIE
+ IPQTLSAESSNLIPLAKTFPLPWSAYVRLLSVKDNDARTFYEKETLRNGWSVRQLDRQ
+ IATQFYERTLLSSDKLSMLQQDAPAVPEGLPEHSLRDPFILEFLDLKDEYSESDLEEA
+ LLNHLMDFMLELGDDFAFVGRQRRLRIDDSWFRIDLLFFHRKLRCLLVVDLKVGKFSY
+ SDAGQMNMYLNYAKEHWTMPGENPPVGLILCAEKGAGEAYYALNGLPNTVMASEYKVQ
+ LPDEKLLADELVRSQNLLETRKS"
+ misc_feature complement(4214140..4215135)
+ /locus_tag="SARI_04292"
+ /note="Protein of unknown function (DUF1016); Region:
+ DUF1016; pfam06250"
+ /db_xref="CDD:114942"
+ misc_feature complement(4214332..4214808)
+ /locus_tag="SARI_04292"
+ /note="Predicted nuclease of restriction endonuclease-like
+ fold [General function prediction only]; Region:
+ COG4804"
+ /db_xref="CDD:227141"
+ gene complement(4215388..4216806)
+ /gene="gltD"
+ /locus_tag="SARI_04293"
+ CDS complement(4215388..4216806)
+ /gene="gltD"
+ /locus_tag="SARI_04293"
+ /inference="protein motif:BlastProDom:IPR001327"
+ /inference="protein motif:HMMPfam:IPR001327"
+ /inference="protein motif:HMMPfam:IPR013027"
+ /inference="protein motif:HMMTigr:IPR006006"
+ /inference="protein motif:superfamily:IPR009051"
+ /inference="similar to AA sequence:INSD:AAV79023.1"
+ /note="'glutamate synthase is composed of subunits alpha
+ and beta; beta subunit is a flavin adenine
+ dinucleotide-NADPH dependent oxidoreductase; provides
+ electrons to the alpha subunit, which binds L-glutamine
+ and 2-oxoglutarate and forms L-glutamate'"
+ /codon_start=1
+ /transl_table=11
+ /product="glutamate synthase subunit beta"
+ /protein_id="YP_001573218.1"
+ /db_xref="GI:161506106"
+ /db_xref="InterPro:IPR001327"
+ /db_xref="InterPro:IPR006006"
+ /db_xref="InterPro:IPR009051"
+ /db_xref="InterPro:IPR013027"
+ /translation="MSQNVYQFIDLQRVDPPKKPLKIRKIEFVEIYEPFSEGQAKAQA
+ DRCLSCGNPYCEWKCPVHNYIPNWLKLANEGRIFEAAELSHQTNTLPEVCGRVCPQDR
+ LCEGSCTLHDEFGAVTIGNIERYINDKAFEMGWRPDMTGVRQTDKRVAIIGAGPAGLA
+ CADVLTRNGVKAVVFDRHPEIGGLLTFGIPAFKLEKEVMTRRREIFTGMGIEFKLNVE
+ VGRDIQLDDLLKEYDAVFLGVGTYQSMRGGLENEDADGVFAALPFLIGNTKQIMGFGE
+ TSDEPYVSMEGKRVVVLGGGDTAMDCVRTSIRQGATHVTCAYRRDEENMPGSRREVKN
+ AREEGVEFQFNVQPLGIEVNANGKVSGVKMVRTEMGEPDAKGRRRAEIVAGSEHVIPA
+ DAVVMAFGFRPHNMEWLAKHSVELDSQGRIIAPERSDNAFQTSNPKIFAGGDIVRGSD
+ LVVTAIAEGRKAADGIMNYLEV"
+ misc_feature complement(4215391..4216791)
+ /gene="gltD"
+ /locus_tag="SARI_04293"
+ /note="glutamate synthase small subunit family protein,
+ proteobacterial; Region: gltD_gamma_fam; TIGR01318"
+ /db_xref="CDD:130385"
+ misc_feature complement(4215844..4216359)
+ /gene="gltD"
+ /locus_tag="SARI_04293"
+ /note="NAD(P)-binding Rossmann-like domain; Region:
+ NAD_binding_8; cl17500"
+ /db_xref="CDD:248054"
+ misc_feature complement(4215718..4215942)
+ /gene="gltD"
+ /locus_tag="SARI_04293"
+ /note="Pyridine nucleotide-disulphide oxidoreductase;
+ Region: Pyr_redox; pfam00070"
+ /db_xref="CDD:215691"
+ gene complement(4216816..4221276)
+ /gene="gltB"
+ /locus_tag="SARI_04294"
+ CDS complement(4216816..4221276)
+ /gene="gltB"
+ /locus_tag="SARI_04294"
+ /inference="protein motif:HMMPfam:IPR000583"
+ /inference="protein motif:HMMPfam:IPR002489"
+ /inference="protein motif:HMMPfam:IPR002932"
+ /inference="protein motif:HMMPfam:IPR006982"
+ /inference="protein motif:superfamily:IPR002489"
+ /note="catalyzes the formation of glutamate from glutamine
+ and alpha-ketoglutarate"
+ /codon_start=1
+ /transl_table=11
+ /product="glutamate synthase subunit alpha"
+ /protein_id="YP_001573219.1"
+ /db_xref="GI:161506107"
+ /db_xref="InterPro:IPR000583"
+ /db_xref="InterPro:IPR002489"
+ /db_xref="InterPro:IPR002932"
+ /db_xref="InterPro:IPR006982"
+ /translation="MLYDKSLEKDNCGFGLIAHIEGEPSHKVVRTAIHALARMQHRGA
+ ILADGKTGDGCGLLLQKPDRFFRIVAQEHGWRLAKNYAVGMIFLNKDPEMAAASRHIV
+ EEELQQETLSIVGWRDVPTNEGVLGEIAISSLPRIEQIFVNAPAGWRPRDMERRLFIA
+ RRRIEKRLQDDKDFYVCSLSNLVNIYKGLCMPADLPRFYLDLADLRLESAICLFHQRF
+ STNTVPRWPLAQPFRYLAHNGEINTITGNRQWARARTYKFQTPLIPDLQSAAPFVNET
+ GSDSSSLDNMLELLLAGGMDIIRSMRLLVPPAWQNNPDMDPDLRAFFDFNSMHMEPWD
+ GPAGIVMSDGRFAACNLDRNGLRPARYVITKDKLITCASEVGIWDYQPDEVVEKGRVG
+ PGELMVIDTRSGRILHSAETDDDLKSRHPYKAWMEKNVRRLVPFEDLPDEEVGSRELD
+ DDLLASYQKQFNYSAEELDSVIRVLGENGQEAVGSMGDDTPFAVLSSQPRIIYDYFRQ
+ QFAQVTNPPIDPLREAHVMSLATSIGREMNVFCEAEGQAHRLSFKSPILLYSDFKQLT
+ TMAEHHYRADRLDITFDVTETTLDATVKALCDKAEQMVRNGTVLLVLSDRNIGRNRLP
+ VPAPMAVGAVQTRLVEQSLRCDANIIVETASARDPHHFAVLLGFGATAIYPYLAYETL
+ GRLIDSQAIAKNYRTVMQNYRNGINKGLYKIMSKMGISTIASYRCSKLFEAVGLHDDV
+ VNLCFQGVVSRIGGASFDDFQQDLLNLSKRAWLARKPISPGGLLKYVHGGEYHAYNPD
+ VVRTLQQAVQSGEYRDYQQYARLVNERPAATLRDLLAINPNGDAVAIDEVEPASELFK
+ RFDTAAMSIGALSPEAHEALAEAMNCLGGNSNSGEGGEDPARYGTNKVSRIKQVASGR
+ FGVTPAYLVNADVIQIKVAQGAKPGEGGQLPGDKVTPYIAKLRYSVPGVTLISPPPHH
+ DIYSIEDLAQLIFDLKQVNPKAMISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGT
+ GASPLSSVKYAGCPWELGLVETQQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAE
+ SFGFGTGPMVALGCKYLRICHLNNCATGVATQDEKLRKNHYHGLPFKVTNYFEFIAHE
+ VRELMAELGVTRLVDLIGRTDLLKELDGFTAKQQKLALSRLLETAEPHPGKALYCTEN
+ NPPFDNGVLNAQLLQQAKPFVDARQSKTFWFDIRNTDRSVGASLSGYIAQTHGDQGLA
+ ADPIKAYFSGTAGQSFGVWNAGGVELYLTGDANDYVGKGMAGGLIAIKPPVGSAFLSH
+ KASIIGNTCLYGATGGRLYAAGRAGERFGVRNSGAITVVEGIGDNGCEYMTGGIVCVL
+ GKTGVNFGAGMTGGFAYVLDEDGEFRKRVNPELVEVLDVDSLAIHEEHLRGLITEHVQ
+ HTGSPRGEEILSRWSSFSTQFALVKPKSSDVKALLGHRSRSAAELRVQAQ"
+ misc_feature complement(4216834..4221276)
+ /gene="gltB"
+ /locus_tag="SARI_04294"
+ /note="glutamate synthase subunit alpha; Provisional;
+ Region: gltB; PRK11750"
+ /db_xref="CDD:236968"
+ misc_feature complement(4220017..4221243)
+ /gene="gltB"
+ /locus_tag="SARI_04294"
+ /note="Glutamine amidotransferases class-II (Gn-AT),
+ glutamate synthase (GltS)-type. GltS is a homodimer that
+ synthesizes L-glutamate from 2-oxoglutarate and
+ L-glutamine, an important step in ammonia assimilation in
+ bacteria, cyanobacteria and plants. The...; Region: GltS;
+ cd00713"
+ /db_xref="CDD:238365"
+ misc_feature complement(order(4220440..4220442,4220557..4220565,
+ 4220626..4220628,4221151..4221153,4221241..4221243))
+ /gene="gltB"
+ /locus_tag="SARI_04294"
+ /note="active site"
+ /db_xref="CDD:238365"
+ misc_feature complement(order(4220608..4220610,4220863..4220865,
+ 4220875..4220877,4220908..4220910,4220923..4220925,
+ 4220929..4220931,4220968..4220970,4220980..4220982,
+ 4220989..4220991))
+ /gene="gltB"
+ /locus_tag="SARI_04294"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238365"
+ misc_feature complement(4219063..4219917)
+ /gene="gltB"
+ /locus_tag="SARI_04294"
+ /note="Glutamate synthase central domain; Region:
+ Glu_syn_central; pfam04898"
+ /db_xref="CDD:218318"
+ misc_feature complement(4217767..4218891)
+ /gene="gltB"
+ /locus_tag="SARI_04294"
+ /note="Glutamate synthase (GltS) FMN-binding domain. GltS
+ is a complex iron-sulfur flavoprotein that catalyzes the
+ reductive synthesis of L-glutamate from 2-oxoglutarate and
+ L-glutamine via intramolecular channelling of ammonia, a
+ reaction in the plant, yeast...; Region: GltS_FMN;
+ cd02808"
+ /db_xref="CDD:239202"
+ misc_feature complement(order(4217938..4217940,4217953..4217955,
+ 4217971..4217973,4217995..4218000,4218061..4218063,
+ 4218067..4218069,4218184..4218192,4218280..4218282,
+ 4218406..4218408,4218466..4218468,4218484..4218486,
+ 4218550..4218552,4218604..4218606,4218685..4218696))
+ /gene="gltB"
+ /locus_tag="SARI_04294"
+ /note="active site"
+ /db_xref="CDD:239202"
+ misc_feature complement(order(4217995..4218000,4218061..4218063,
+ 4218067..4218069,4218187..4218192,4218280..4218282,
+ 4218484..4218486,4218550..4218552,4218604..4218606,
+ 4218685..4218696))
+ /gene="gltB"
+ /locus_tag="SARI_04294"
+ /note="FMN binding site [chemical binding]; other site"
+ /db_xref="CDD:239202"
+ misc_feature complement(order(4218184..4218189,4218406..4218408,
+ 4218466..4218468))
+ /gene="gltB"
+ /locus_tag="SARI_04294"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:239202"
+ misc_feature complement(order(4217938..4217940,4217953..4217955,
+ 4217971..4217973))
+ /gene="gltB"
+ /locus_tag="SARI_04294"
+ /note="3Fe-4S cluster binding site [ion binding]; other
+ site"
+ /db_xref="CDD:239202"
+ misc_feature complement(4216888..4217640)
+ /gene="gltB"
+ /locus_tag="SARI_04294"
+ /note="gltb_C. This domain is found at the C-terminus of
+ the large subunit (gltB) of glutamate synthase (GltS).
+ GltS encodes a complex iron-sulfur flavoprotein that
+ catalyzes the synthesis of L-glutamate from L-glutamine
+ and 2-oxoglutarate. It requires the...; Region: gltB_C;
+ cd00982"
+ /db_xref="CDD:238482"
+ misc_feature complement(order(4217053..4217064,4217107..4217109,
+ 4217116..4217118,4217125..4217127,4217164..4217166,
+ 4217170..4217175,4217182..4217193,4217218..4217220,
+ 4217224..4217229,4217236..4217250,4217275..4217277,
+ 4217284..4217286,4217293..4217295,4217302..4217313,
+ 4217368..4217370,4217377..4217379,4217392..4217400,
+ 4217434..4217436,4217446..4217451,4217458..4217460,
+ 4217515..4217520,4217527..4217529,4217536..4217541))
+ /gene="gltB"
+ /locus_tag="SARI_04294"
+ /note="domain interface; other site"
+ /db_xref="CDD:238482"
+ gene 4221947..4222876
+ /locus_tag="SARI_04295"
+ CDS 4221947..4222876
+ /locus_tag="SARI_04295"
+ /inference="protein motif:HMMPfam:IPR007197"
+ /inference="protein motif:HMMSmart:IPR006638"
+ /inference="protein motif:HMMTigr:IPR005911"
+ /inference="similar to AA sequence:REFSEQ:NP_457708.1"
+ /note="'KEGG: eci:UTI89_C3647 5.3e-149 yhcC; hypothetical
+ protein;
+ COG: COG1242 Predicted Fe-S oxidoreductase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573220.1"
+ /db_xref="GI:161506108"
+ /db_xref="InterPro:IPR005911"
+ /db_xref="InterPro:IPR006638"
+ /db_xref="InterPro:IPR007197"
+ /translation="MQLQRLVNMFGGDLLRRYGQKVHKLTLHGGFSCPNRDGTIGRGG
+ CTFCNVASFADEAQQHRSIAEQLSYQAHLVNRAKRYLAYFQAYTSTFAEVQVLRSMYQ
+ QAVSQASIVGLCVGTRPDCVPQAVVDLLCEYKDQGYEVWLELGLQTAHDKTLRRINRG
+ HDFACYQRTTRLARERGLKVCAHLIVGLPGEGQSECLQTLARVVETGVDGIKLHPLHI
+ VKGSIMAKAWEAGRLSGIALDDYTLTAGEMIRHTPPEVIYHRISASARRPTLLAPLWC
+ ENRWTGMVELDKYLNEHGVQGSALARPWIPPIV"
+ misc_feature 4221962..4222852
+ /locus_tag="SARI_04295"
+ /note="radical SAM protein, TIGR01212 family; Region:
+ TIGR01212"
+ /db_xref="CDD:130279"
+ misc_feature 4222076..4222630
+ /locus_tag="SARI_04295"
+ /note="Radical SAM superfamily. Enzymes of this family
+ generate radicals by combining a 4Fe-4S cluster and
+ S-adenosylmethionine (SAM) in close proximity. They are
+ characterized by a conserved CxxxCxxC motif, which
+ coordinates the conserved iron-sulfur cluster; Region:
+ Radical_SAM; cd01335"
+ /db_xref="CDD:100105"
+ misc_feature order(4222079..4222081,4222085..4222093,4222205..4222207,
+ 4222211..4222216,4222292..4222300,4222379..4222381,
+ 4222499..4222501,4222589..4222594)
+ /locus_tag="SARI_04295"
+ /note="FeS/SAM binding site; other site"
+ /db_xref="CDD:100105"
+ gene 4222940..4225306
+ /locus_tag="SARI_04296"
+ CDS 4222940..4225306
+ /locus_tag="SARI_04296"
+ /inference="protein motif:BlastProDom:IPR001789"
+ /inference="protein motif:Gene3D:IPR003594"
+ /inference="protein motif:HMMPfam:IPR001789"
+ /inference="protein motif:HMMPfam:IPR003594"
+ /inference="protein motif:HMMPfam:IPR003661"
+ /inference="protein motif:HMMPfam:IPR008207"
+ /inference="protein motif:HMMPfam:IPR013767"
+ /inference="protein motif:HMMSmart:IPR000014"
+ /inference="protein motif:HMMSmart:IPR001789"
+ /inference="protein motif:HMMSmart:IPR003594"
+ /inference="protein motif:HMMSmart:IPR003661"
+ /inference="protein motif:HMMSmart:IPR008207"
+ /inference="protein motif:HMMTigr:IPR000014"
+ /inference="protein motif:superfamily:IPR003594"
+ /inference="protein motif:superfamily:IPR008207"
+ /inference="protein motif:superfamily:IPR009082"
+ /inference="protein motif:superfamily:IPR011006"
+ /note="sensor-regulator protein which regulates the
+ expression of many genes in response to respiratory growth
+ conditions including anaerobic repression of the arc
+ modulon; hybrid sensory histidine kinase in two-component
+ regulatory system with ArcA"
+ /codon_start=1
+ /transl_table=11
+ /product="aerobic respiration control sensor protein ArcB"
+ /protein_id="YP_001573221.1"
+ /db_xref="GI:161506109"
+ /db_xref="InterPro:IPR000014"
+ /db_xref="InterPro:IPR001789"
+ /db_xref="InterPro:IPR003594"
+ /db_xref="InterPro:IPR003661"
+ /db_xref="InterPro:IPR008207"
+ /db_xref="InterPro:IPR009082"
+ /db_xref="InterPro:IPR011006"
+ /db_xref="InterPro:IPR013767"
+ /translation="MCGVVVKESSMKQIRMLAQYYVDLMMKLGLVRFSMLLALALVVL
+ AIVVQMAVTMVLHGQVESIDVIRSIFFGLLITPWAVYFLSVVVEQLEESRQRLSRLVQ
+ KLEEMRERDLKLNVQLKDNIAQLNQEIADREKAEAELHETFEQLKVEIKEREEAQIQL
+ EQQSSFLRSFLDASPDLVFYRNEDKEFSGCNRAMELLTGKSEKQLVHLKPEDVYSPEA
+ AEKVIETDEKVFRHNVSLTYEQWLDYPDGRKACFEIRKVPYYDRVGKRHGLMGFGRDI
+ TERKRYQDALERASRDKTTFISTISHELRTPLNGIVGLSRILLDTDLTAEQEKYLKTI
+ HVSAVTLGNIFNDIIDMDKMERRKVQLDNQPIDFTSFMADLENLSGLQAQQKGLRFVL
+ EPTLPLPHKVITDGTRLRQILWNLISNAVKFTQQGQVTVRARYDEGDMLHFEVEDSGI
+ GIPQDEQDKIFAMYYQVKDSHGGKPATGTGIGLAVSRRLAKNMGGDITVSSLPGKGST
+ FTLTVHAPAVAEEVEDAFEEDDMPLPALHVLLVEDIELNVIVARSVLEKLGNSVDVAM
+ TGKAALEMFAPGEYDLVLLDIQLPDMTGLDIARELTRRHMREDLPPLVALTANVLKDK
+ KEYLDAGMDDVLSKPLSVPALTAMIKKFWDATDKEESTVTPEESDKAQALLDIPMLEQ
+ YIELVGPKLITDGLAVFEKMMPGYLSVLESNLTARDKKGVVEEGHKIKGAAGSVGLRH
+ LQQLGQQIQSPDLPAWEDNVAEWIEEMKQEWQHDVAVLKAWVASAEKK"
+ misc_feature 4222970..4225303
+ /locus_tag="SARI_04296"
+ /note="aerobic respiration control sensor protein ArcB;
+ Provisional; Region: PRK11091"
+ /db_xref="CDD:236842"
+ misc_feature 4223459..4223767
+ /locus_tag="SARI_04296"
+ /note="PAS domain; PAS motifs appear in archaea,
+ eubacteria and eukarya. Probably the most surprising
+ identification of a PAS domain was that in EAG-like
+ K+-channels. PAS domains have been found to bind ligands,
+ and to act as sensors for light and oxygen in...; Region:
+ PAS; cd00130"
+ /db_xref="CDD:238075"
+ misc_feature order(4223507..4223509,4223519..4223521,4223537..4223539,
+ 4223576..4223587,4223663..4223665,4223678..4223680)
+ /locus_tag="SARI_04296"
+ /note="putative active site [active]"
+ /db_xref="CDD:238075"
+ misc_feature order(4223567..4223569,4223579..4223581,4223603..4223605,
+ 4223612..4223617,4223699..4223701,4223705..4223707)
+ /locus_tag="SARI_04296"
+ /note="heme pocket [chemical binding]; other site"
+ /db_xref="CDD:238075"
+ misc_feature 4223807..4223992
+ /locus_tag="SARI_04296"
+ /note="Histidine Kinase A (dimerization/phosphoacceptor)
+ domain; Histidine Kinase A dimers are formed through
+ parallel association of 2 domains creating 4-helix
+ bundles; usually these domains contain a conserved His
+ residue and are activated via...; Region: HisKA; cd00082"
+ /db_xref="CDD:119399"
+ misc_feature order(4223825..4223827,4223837..4223839,4223849..4223851,
+ 4223858..4223860,4223870..4223872,4223879..4223881,
+ 4223927..4223929,4223939..4223941,4223948..4223950,
+ 4223960..4223962,4223969..4223971,4223981..4223983)
+ /locus_tag="SARI_04296"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:119399"
+ misc_feature 4223843..4223845
+ /locus_tag="SARI_04296"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:119399"
+ misc_feature 4224164..4224478
+ /locus_tag="SARI_04296"
+ /note="Histidine kinase-like ATPases; This family includes
+ several ATP-binding proteins for example: histidine
+ kinase, DNA gyrase B, topoisomerases, heat shock protein
+ HSP90, phytochrome-like ATPases and DNA mismatch repair
+ proteins; Region: HATPase_c; cd00075"
+ /db_xref="CDD:238030"
+ misc_feature order(4224182..4224184,4224194..4224196,4224203..4224205,
+ 4224272..4224274,4224278..4224280,4224284..4224286,
+ 4224290..4224295,4224377..4224388,4224434..4224436,
+ 4224440..4224442,4224455..4224460,4224464..4224466)
+ /locus_tag="SARI_04296"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature 4224194..4224196
+ /locus_tag="SARI_04296"
+ /note="Mg2+ binding site [ion binding]; other site"
+ /db_xref="CDD:238030"
+ misc_feature order(4224284..4224286,4224290..4224292,4224377..4224379,
+ 4224383..4224385)
+ /locus_tag="SARI_04296"
+ /note="G-X-G motif; other site"
+ /db_xref="CDD:238030"
+ misc_feature 4224554..4224892
+ /locus_tag="SARI_04296"
+ /note="Signal receiver domain; originally thought to be
+ unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
+ recently identified in eukaroytes ETR1 Arabidopsis
+ thaliana; this domain receives the signal from the sensor
+ partner in a two-component systems; Region: REC; cd00156"
+ /db_xref="CDD:238088"
+ misc_feature order(4224563..4224568,4224695..4224697,4224719..4224721,
+ 4224788..4224790,4224842..4224844,4224851..4224856)
+ /locus_tag="SARI_04296"
+ /note="active site"
+ /db_xref="CDD:238088"
+ misc_feature 4224695..4224697
+ /locus_tag="SARI_04296"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238088"
+ misc_feature order(4224704..4224709,4224713..4224721)
+ /locus_tag="SARI_04296"
+ /note="intermolecular recognition site; other site"
+ /db_xref="CDD:238088"
+ misc_feature 4224851..4224859
+ /locus_tag="SARI_04296"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238088"
+ misc_feature 4225013..4225255
+ /locus_tag="SARI_04296"
+ /note="Histidine Phosphotransfer domain, involved in
+ signalling through a two part component systems in which
+ an autophosphorylating histidine protein kinase serves as
+ a phosphoryl donor to a response regulator protein; the
+ response regulator protein is...; Region: HPT; cd00088"
+ /db_xref="CDD:238041"
+ misc_feature order(4225118..4225120,4225127..4225132,4225175..4225177,
+ 4225184..4225186)
+ /locus_tag="SARI_04296"
+ /note="putative binding surface; other site"
+ /db_xref="CDD:238041"
+ misc_feature 4225118..4225120
+ /locus_tag="SARI_04296"
+ /note="active site"
+ /db_xref="CDD:238041"
+ unsure 4225163..4225245
+ /locus_tag="SARI_04296"
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(4225311..4225416)
+ /locus_tag="SARI_04297"
+ misc_RNA complement(4225311..4225416)
+ /locus_tag="SARI_04297"
+ /product="SraH RNA"
+ /inference="nucleotide motif:Rfam:RF00081"
+ /note="Rfam score 101.14"
+ gene 4225534..4226187
+ /locus_tag="SARI_04298"
+ CDS 4225534..4226187
+ /locus_tag="SARI_04298"
+ /inference="protein motif:HMMPfam:IPR002818"
+ /inference="similar to AA sequence:INSD:AAL22196.1"
+ /note="'KEGG: gvi:glr2813 0.00078 probable protease
+ K05520;
+ COG: COG3155 Uncharacterized protein involved in an early
+ stage of isoprenoid biosynthesis;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="isoprenoid biosynthesis protein with
+ amidotransferase-like domain"
+ /protein_id="YP_001573222.1"
+ /db_xref="GI:161506110"
+ /db_xref="InterPro:IPR002818"
+ /translation="MKKIGVVLSGCGVYDGAEIHEAVLTLLAIARSGAQAVCFAPDKQ
+ QAVVINHLTGEAMAETRNVLVEAARITRGEIRPLAQAQPEELDALIVPGGFGAAKNLS
+ NFAIQGSECRVDSDLVALAKAMHKSGKPQGFICIAPAMLPKIFDFPLRLTIGTDIDTA
+ EVLEEMGAEHVPCPVDDIVVDEDNKVVTTPAYMLAQDIAQAASGIDKLVSRVLVLAE"
+ misc_feature 4225534..4226184
+ /locus_tag="SARI_04298"
+ /note="isoprenoid biosynthesis protein with
+ amidotransferase-like domain; Provisional; Region:
+ PRK11780"
+ /db_xref="CDD:236980"
+ misc_feature 4225543..4226181
+ /locus_tag="SARI_04298"
+ /note="Type 1 glutamine amidotransferase (GATase1)-like
+ domain found in zebrafish ES1; Region: GATase1_ES1;
+ cd03133"
+ /db_xref="CDD:153227"
+ misc_feature 4225936..4225938
+ /locus_tag="SARI_04298"
+ /note="conserved cys residue [active]"
+ /db_xref="CDD:153227"
+ gene 4226184..4226912
+ /gene="mtgA"
+ /locus_tag="SARI_04299"
+ CDS 4226184..4226912
+ /gene="mtgA"
+ /locus_tag="SARI_04299"
+ /inference="protein motif:BlastProDom:IPR001264"
+ /inference="protein motif:HMMPfam:IPR001264"
+ /inference="protein motif:HMMTigr:IPR011812"
+ /inference="similar to AA sequence:REFSEQ:NP_806919.1"
+ /note="glycosyltransferase; polymerizes glycan strands in
+ the peptidoglycan"
+ /codon_start=1
+ /transl_table=11
+ /product="monofunctional biosynthetic peptidoglycan
+ transglycosylase"
+ /protein_id="YP_001573223.1"
+ /db_xref="GI:161506111"
+ /db_xref="InterPro:IPR001264"
+ /db_xref="InterPro:IPR011812"
+ /translation="MSKRRLAPLTFLRRLLFRTLVALVVFWGGGIALFSVVPVPFSAV
+ MAERQISAWLSGEFGYVAHSDWVSMEDISPWMGLAVMAAEDQKFPEHWGFDVLAIEKA
+ LAHNERNESRIRGASTLSQQTVKNLFLWDGRSWVRKGLEAGLTLGIETVWSKKRILTV
+ YLNIAEFGDGIFGVEAAARRYFNKPASRLNMTEAALLAAVLPNPLRYKADAPSGYVRS
+ RQSWILRQMRQLGGESFMTRNQLY"
+ misc_feature 4226262..4226900
+ /gene="mtgA"
+ /locus_tag="SARI_04299"
+ /note="monofunctional biosynthetic peptidoglycan
+ transglycosylase; Provisional; Region: mtgA; PRK00056"
+ /db_xref="CDD:234603"
+ misc_feature 4226274..4226882
+ /gene="mtgA"
+ /locus_tag="SARI_04299"
+ /note="Transglycosylase; Region: Transgly; cl17702"
+ /db_xref="CDD:248256"
+ gene complement(4226996..4227628)
+ /locus_tag="SARI_04300"
+ CDS complement(4226996..4227628)
+ /locus_tag="SARI_04300"
+ /inference="protein motif:superfamily:IPR011009"
+ /inference="similar to AA sequence:REFSEQ:YP_218250.1"
+ /note="'COG: NOG06212 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573224.1"
+ /db_xref="GI:161506112"
+ /db_xref="InterPro:IPR011009"
+ /translation="MIPLSEQTPLGAGRHRKCYAHPDNARRCIKVIYNRNHGGDKEIR
+ RELSYYSHLSRYLADWSAIPRYYGTVKTDCGIGYVYDMITDFNGAPSITLTEFAALCR
+ YEEDVAVLRQLLKKLKHYLLDNHIVTMSLKPQNVLCQRISESEVVPVVCDNLGESTFI
+ PLATWSKWCCERKLERVWQRFIAQPELALALEKGAQPKDNKGLALTSREA"
+ misc_feature complement(4226999..4227628)
+ /locus_tag="SARI_04300"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10345"
+ /db_xref="CDD:182395"
+ misc_feature complement(<4227062..4227601)
+ /locus_tag="SARI_04300"
+ /note="Serine/threonine protein kinase [General function
+ prediction only / Signal transduction mechanisms /
+ Transcription / DNA replication, recombination, and
+ repair]; Region: SPS1; COG0515"
+ /db_xref="CDD:223589"
+ gene complement(4227875..4228147)
+ /locus_tag="SARI_04301"
+ CDS complement(4227875..4228147)
+ /locus_tag="SARI_04301"
+ /inference="protein motif:BlastProDom:IPR000032"
+ /inference="protein motif:Gene3D:IPR000032"
+ /inference="protein motif:HMMPfam:IPR000032"
+ /inference="protein motif:HMMTigr:IPR005698"
+ /inference="protein motif:ScanRegExp:IPR001020"
+ /inference="protein motif:ScanRegExp:IPR002114"
+ /inference="protein motif:superfamily:IPR000032"
+ /inference="similar to AA sequence:INSD:CAD07841.1"
+ /note="'KEGG: aha:AHA_3919 4.7e-31 multiphosphoryl
+ transfer protein (MTP) K00924;
+ COG: COG1925 Phosphotransferase system, HPr-related
+ proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphohistidinoprotein-hexose
+ phosphotransferase component of N-regulated PTS system
+ (Npr)"
+ /protein_id="YP_001573225.1"
+ /db_xref="GI:161506113"
+ /db_xref="InterPro:IPR000032"
+ /db_xref="InterPro:IPR001020"
+ /db_xref="InterPro:IPR002114"
+ /db_xref="InterPro:IPR005698"
+ /translation="MTVKQTVEITNKLGMHARPAMKLFELMQGFDAEVLLRNDEGTEA
+ EANSVIALLMLDSAKGRQIEIEATGPQEVEALAAVIALFNSGFDED"
+ misc_feature complement(4227899..4228132)
+ /locus_tag="SARI_04301"
+ /note="Histidine-containing phosphocarrier protein
+ (HPr)-like proteins. HPr is a central component of the
+ bacterial phosphoenolpyruvate sugar phosphotransferase
+ system (PTS). The PTS catalyses the phosphorylation of
+ sugar substrates during their translocation...; Region:
+ PTS-HPr_like; cd00367"
+ /db_xref="CDD:238217"
+ misc_feature complement(4228121..4228132)
+ /locus_tag="SARI_04301"
+ /note="dimerization domain swap beta strand [polypeptide
+ binding]; other site"
+ /db_xref="CDD:238217"
+ misc_feature complement(order(4227986..4227991,4227998..4228009,
+ 4228064..4228066,4228073..4228075,4228085..4228090,
+ 4228094..4228099,4228103..4228105))
+ /locus_tag="SARI_04301"
+ /note="regulatory protein interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:238217"
+ misc_feature complement(4228100..4228102)
+ /locus_tag="SARI_04301"
+ /note="active site"
+ /db_xref="CDD:238217"
+ misc_feature complement(4228004..4228006)
+ /locus_tag="SARI_04301"
+ /note="regulatory phosphorylation site [posttranslational
+ modification]; other site"
+ /db_xref="CDD:238217"
+ gene complement(4228144..4228998)
+ /locus_tag="SARI_04302"
+ CDS complement(4228144..4228998)
+ /locus_tag="SARI_04302"
+ /inference="protein motif:HMMPfam:IPR005337"
+ /inference="protein motif:HMMPIR:IPR005337"
+ /inference="similar to AA sequence:INSD:AAL22192.1"
+ /note="'KEGG: reh:H16_A0381 1.9e-59 predicted
+ P-loop-containing kinase K01009;
+ COG: COG1660 Predicted P-loop-containing kinase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573226.1"
+ /db_xref="GI:161506114"
+ /db_xref="InterPro:IPR005337"
+ /translation="MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPDLARTL
+ ADRQISAAVSIDVRNMPESPEIFEQAMNNLPDAFSPQLLFLDADRNTLIRRYSDTRRL
+ HPLSSKNLSLESAIDKESDLLEPLRSRADLIVDTSEMSVHELAEMLRTRLLGKREREL
+ TMVFESFGFKHGIPIDADYVFDVRFLPNPHWDPKLRPMTGLDKPVAAFLDRHTEVHNF
+ IYQTRSYLELWLPMLETNNRSYLTVAIGCTGGKHRSVYIAEQLADYFRSRGKNVQSRH
+ RTLEKRKT"
+ misc_feature complement(4228153..4228998)
+ /locus_tag="SARI_04302"
+ /note="P-loop ATPase protein family; Region: ATP_bind_2;
+ cl15794"
+ /db_xref="CDD:247071"
+ gene complement(4229044..4229535)
+ /locus_tag="SARI_04303"
+ CDS complement(4229044..4229535)
+ /locus_tag="SARI_04303"
+ /inference="protein motif:BlastProDom:IPR002178"
+ /inference="protein motif:Gene3D:IPR002178"
+ /inference="protein motif:HMMPfam:IPR002178"
+ /inference="protein motif:HMMTigr:IPR006320"
+ /inference="protein motif:ScanRegExp:IPR002178"
+ /inference="similar to AA sequence:INSD:AAX67166.1"
+ /note="'KEGG: stm:STM3322 1.5e-80 ptsN; sugar specific PTS
+ family, enzyme IIA, also regulates N metabolism K02806;
+ COG: COG1762 Phosphotransferase system
+ mannitol/fructose-specific IIA domain (Ntr-type);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="PTS system transporter subunit IIA-like
+ nitrogen-regulatory protein PtsN"
+ /protein_id="YP_001573227.1"
+ /db_xref="GI:161506115"
+ /db_xref="InterPro:IPR002178"
+ /db_xref="InterPro:IPR006320"
+ /translation="MINNDTTLQLSSVLNQECTRSGVHCQSKKRALEIISELAAKQLS
+ LPPQVVFEAILIREKMGSTGIGNGIAIPHGKLEEDTLRAVGVFVQLETPIAFDAIDNQ
+ PVDLLFALLVPADQTKTHLHTLSLVAKRLADKTICRRLRAALNDEELYQIITDTEGEQ
+ NEA"
+ misc_feature complement(4229077..4229496)
+ /locus_tag="SARI_04303"
+ /note="PTS_IIA, PTS system, fructose/mannitol specific IIA
+ subunit. The bacterial phosphoenolpyruvate: sugar
+ phosphotransferase system (PTS) is a multi-protein system
+ involved in the regulation of a variety of metabolic and
+ transcriptional processes. This...; Region: PTS_IIA_fru;
+ cd00211"
+ /db_xref="CDD:238129"
+ misc_feature complement(order(4229317..4229319,4229365..4229367))
+ /locus_tag="SARI_04303"
+ /note="active site"
+ /db_xref="CDD:238129"
+ misc_feature complement(4229317..4229319)
+ /locus_tag="SARI_04303"
+ /note="phosphorylation site [posttranslational
+ modification]"
+ /db_xref="CDD:238129"
+ gene complement(4229653..4229940)
+ /locus_tag="SARI_04304"
+ CDS complement(4229653..4229940)
+ /locus_tag="SARI_04304"
+ /inference="protein motif:HMMPfam:IPR003489"
+ /inference="protein motif:HMMTigr:IPR003489"
+ /inference="similar to AA sequence:REFSEQ:NP_462231.1"
+ /note="YhbH; resting ribosome-binding protein involved in
+ ribosome stabilization and preservation in stationary
+ phase; binds specifically 100S ribosomes (an inactive
+ ribosome product of a 70S ribosome dimerization); seems to
+ be involved in modulation of the sigma(54) (RpoN) activity
+ for quorum sensing"
+ /codon_start=1
+ /transl_table=11
+ /product="putative sigma(54) modulation protein"
+ /protein_id="YP_001573228.1"
+ /db_xref="GI:161506116"
+ /db_xref="InterPro:IPR003489"
+ /translation="MQLNITGHNVEITEPLREFVTTKFAKLEQYFERINQVYVVLKVE
+ KVTHISDATLHVNGGEIHASAEGQDMYAAIDGLIDKLARQLTRHKDKLKQH"
+ misc_feature complement(4229668..4229937)
+ /locus_tag="SARI_04304"
+ /note="RaiA ("ribosome-associated inhibitor A",
+ also known as Protein Y (PY), YfiA, and SpotY, is a
+ stress-response protein that binds the ribosomal subunit
+ interface and arrests translation by interfering with
+ aminoacyl-tRNA binding to the ribosomal...; Region: RaiA;
+ cd00552"
+ /db_xref="CDD:238308"
+ misc_feature complement(order(4229668..4229670,4229680..4229685,
+ 4229725..4229727,4229734..4229736,4229740..4229742,
+ 4229749..4229751,4229755..4229757,4229764..4229775,
+ 4229782..4229784,4229809..4229811,4229821..4229823,
+ 4229833..4229838,4229854..4229856,4229863..4229865,
+ 4229917..4229919,4229923..4229925,4229929..4229931))
+ /locus_tag="SARI_04304"
+ /note="30S subunit binding site; other site"
+ /db_xref="CDD:238308"
+ gene complement(4229963..4231396)
+ /locus_tag="SARI_04305"
+ CDS complement(4229963..4231396)
+ /locus_tag="SARI_04305"
+ /inference="protein motif:FPrintScan:IPR000394"
+ /inference="protein motif:HMMPfam:IPR000394"
+ /inference="protein motif:HMMPfam:IPR007046"
+ /inference="protein motif:HMMPfam:IPR007634"
+ /inference="protein motif:HMMTigr:IPR000394"
+ /inference="protein motif:ScanRegExp:IPR000394"
+ /inference="similar to AA sequence:INSD:AAV79012.1"
+ /note="'sigma factors are initiation factors that promote
+ the attachment of RNA polymerase to specific initiation
+ sites and are then released; sigma 54 factor is
+ responsible for the expression of enzymes involved in
+ nitrogen assimilation and metabolism; the rhizobia often
+ have 2 copies of this sigma factor; in Rhizobium etli
+ RpoN1 shown to be involved in the assimilation of several
+ nitrogen and carbon sources during free-living aerobic
+ growth and RpoN2 is involved in symbiotic nitrogen
+ fixation; in Bradyrhizobium both RpoN1 and N2 are
+ functional in free-living and symbiotic conditions, rpoN1
+ gene was regulated in response to oxygen'"
+ /codon_start=1
+ /transl_table=11
+ /product="RNA polymerase factor sigma-54"
+ /protein_id="YP_001573229.1"
+ /db_xref="GI:161506117"
+ /db_xref="InterPro:IPR000394"
+ /db_xref="InterPro:IPR007046"
+ /db_xref="InterPro:IPR007634"
+ /translation="MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALENN
+ PLLEQTDLHDEIDTQQPQDNDPLDTADALEQKEMPEELPLDASWDEIYTAGTPSGPSG
+ DYIDDELPVYQGETTQSLQDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVSLDD
+ IRESMGDEEVDLDEVEAVLKRIQRFDPVGVAAKDLRDCLLIQLSQFDKSTPWLEEARL
+ IICDHLDLLANHDFRTLMRVTRLKEEELKEAVNLIQSLDPRPGQSIQTGEPEYIIPDV
+ LVRKHNGRWTVELNGDSIPRLQINQRYAAMCNNARNDADSQFIRSNLQDAKWLIKSLE
+ SRNDTLLRVSRCIVEQQQAFFEQGEEYMKPMVLADIAQAVEMHESTISRVTTQKYLHS
+ PRGIFELKYFFSSHVNTEGGGEASSTAIRALVKKLIAAENPAKPLSDSKLTSLLSEQG
+ IMVARRTVAKYRESLSIPPSNQRKQLV"
+ misc_feature complement(4229969..4231396)
+ /locus_tag="SARI_04305"
+ /note="RNA polymerase factor sigma-54; Reviewed; Region:
+ PRK05932"
+ /db_xref="CDD:235648"
+ misc_feature complement(<4231325..4231390)
+ /locus_tag="SARI_04305"
+ /note="Sigma-54 factor, Activator interacting domain
+ (AID); Region: Sigma54_AID; pfam00309"
+ /db_xref="CDD:215850"
+ misc_feature complement(4230485..4231081)
+ /locus_tag="SARI_04305"
+ /note="Sigma-54 factor, core binding domain; Region:
+ Sigma54_CBD; pfam04963"
+ /db_xref="CDD:218353"
+ misc_feature complement(4229972..4230451)
+ /locus_tag="SARI_04305"
+ /note="Sigma-54, DNA binding domain; Region: Sigma54_DBD;
+ pfam04552"
+ /db_xref="CDD:218144"
+ gene complement(4231444..4232169)
+ /locus_tag="SARI_04306"
+ CDS complement(4231444..4232169)
+ /locus_tag="SARI_04306"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:REFSEQ:NP_462229.1"
+ /note="'KEGG: pen:PSEEN1094 1.6e-83 ABC transporter,
+ ATP-binding protein;
+ COG: COG1137 ABC-type (unclassified) transport system,
+ ATPase component;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative ABC transporter ATP-binding protein
+ YhbG"
+ /protein_id="YP_001573230.1"
+ /db_xref="GI:161506118"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MATLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTT
+ TFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRRLSVFDNLMAV
+ LQIRDDLTAEQREDRANELMEEFHIEHLRDSMGQALSGGERRRVEIARALAANPKFIL
+ LDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAH
+ GTPTEILQDEHVKRVYLGEDFRL"
+ misc_feature complement(4231447..4232169)
+ /locus_tag="SARI_04306"
+ /note="lipopolysaccharide ABC transporter ATP-binding
+ protein; Provisional; Region: PRK10895"
+ /db_xref="CDD:182817"
+ misc_feature complement(4231462..4232160)
+ /locus_tag="SARI_04306"
+ /note="ATP-binding cassette component of YhbG transport
+ system; Region: ABC_YhbG; cd03218"
+ /db_xref="CDD:213185"
+ misc_feature complement(4232041..4232064)
+ /locus_tag="SARI_04306"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213185"
+ misc_feature complement(order(4231585..4231587,4231681..4231686,
+ 4231915..4231917,4232038..4232046,4232050..4232055))
+ /locus_tag="SARI_04306"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213185"
+ misc_feature complement(4231915..4231926)
+ /locus_tag="SARI_04306"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213185"
+ misc_feature complement(4231729..4231758)
+ /locus_tag="SARI_04306"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213185"
+ misc_feature complement(4231681..4231698)
+ /locus_tag="SARI_04306"
+ /note="Walker B; other site"
+ /db_xref="CDD:213185"
+ misc_feature complement(4231663..4231674)
+ /locus_tag="SARI_04306"
+ /note="D-loop; other site"
+ /db_xref="CDD:213185"
+ misc_feature complement(4231579..4231599)
+ /locus_tag="SARI_04306"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213185"
+ gene complement(4232176..4232730)
+ /locus_tag="SARI_04307"
+ CDS complement(4232176..4232730)
+ /locus_tag="SARI_04307"
+ /inference="protein motif:HMMPfam:IPR005653"
+ /inference="protein motif:superfamily:IPR012338"
+ /inference="similar to AA sequence:INSD:AAL22187.1"
+ /note="'LptA; periplasmic binding protein part of a
+ putative ABC superfamily of uptake transporters; interacts
+ with LptB protein, the ATP binding component of the uptake
+ system'"
+ /codon_start=1
+ /transl_table=11
+ /product="lipopolysaccharide transport periplasmic protein
+ LptA"
+ /protein_id="YP_001573231.1"
+ /db_xref="GI:161506119"
+ /db_xref="InterPro:IPR005653"
+ /db_xref="InterPro:IPR012338"
+ /translation="MKFKTNKLSLNLMLAGSLLAASIPAFAVTGDTEQPIHIDSDQQS
+ LDMQGNVVTFTGNVVMTQGTIKINADKVVVTRPGGEQGKEVIDGYGNPATFYQMQDNG
+ KPVKGHASHMHYELAKDFVVLTGNAYLEQLDSNIKGDKITYLVKEQKMQAFSDKGKRV
+ TTVLVPSQLQDKNKGQTPAQKKSN"
+ misc_feature complement(4232179..4232664)
+ /locus_tag="SARI_04307"
+ /note="lipopolysaccharide transport periplasmic protein
+ LptA; Provisional; Region: PRK10894"
+ /db_xref="CDD:182816"
+ misc_feature complement(4232230..4232652)
+ /locus_tag="SARI_04307"
+ /note="lipopolysaccharide transport periplasmic protein
+ LptA; Region: outer_YhbN_LptA; TIGR03002"
+ /db_xref="CDD:234083"
+ gene complement(4232699..4233274)
+ /locus_tag="SARI_04308"
+ CDS complement(4232699..4233274)
+ /locus_tag="SARI_04308"
+ /inference="protein motif:HMMPfam:IPR010664"
+ /inference="similar to AA sequence:INSD:AAL22186.1"
+ /note="'COG: COG3117 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573232.1"
+ /db_xref="GI:161506120"
+ /db_xref="InterPro:IPR010664"
+ /translation="MSKTRRWVIILLSLAILVLIGINLADKDDPAAVVVNSNDPTYKS
+ EHTDTVVYSPEGALSYRLIAQHVEYFSDQAVSWFTQPVLTTFDKDKVPTWSIKADKAK
+ LTNDRMLYLYGHVEVNALVPDAQLRRITTDNAQINLVTQDVTSNDLVTLYGTTFNSSG
+ LKMRGNLRSKNAELIEKVRTSYEIQNKQTQP"
+ misc_feature complement(4232702..4233274)
+ /locus_tag="SARI_04308"
+ /note="lipopolysaccharide exporter periplasmic protein;
+ Provisional; Region: PRK10893"
+ /db_xref="CDD:236788"
+ misc_feature complement(4232726..4233202)
+ /locus_tag="SARI_04308"
+ /note="Lipopolysaccharide-assembly, LptC-related; Region:
+ LptC; pfam06835"
+ /db_xref="CDD:219198"
+ gene complement(4233271..4233837)
+ /locus_tag="SARI_04309"
+ CDS complement(4233271..4233837)
+ /locus_tag="SARI_04309"
+ /inference="protein motif:HMMPfam:IPR013200"
+ /inference="protein motif:HMMPIR:IPR008230"
+ /inference="protein motif:HMMTigr:IPR006549"
+ /inference="protein motif:HMMTigr:IPR010023"
+ /inference="similar to AA sequence:REFSEQ:YP_152320.1"
+ /note="forms homotetramers; catalyzes hydrolysis of KDO
+ 8-P to KDO and inorganic phosphate; functions in
+ lipopolysaccharide biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="3-deoxy-D-manno-octulosonate 8-phosphate
+ phosphatase"
+ /protein_id="YP_001573233.1"
+ /db_xref="GI:161506121"
+ /db_xref="InterPro:IPR006549"
+ /db_xref="InterPro:IPR008230"
+ /db_xref="InterPro:IPR010023"
+ /db_xref="InterPro:IPR013200"
+ /translation="MSKAGASLATCYGPVSTHVITKAENIRLLILDVDGVLSDGLIYM
+ GNNGEELKAFNVRDGYGIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQGQSNK
+ LIAFGDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTHIT
+ GGRGAVREVCDLLLLAQGKLDEAKGQSI"
+ misc_feature complement(4233274..4233822)
+ /locus_tag="SARI_04309"
+ /note="3-deoxy-D-manno-octulosonate 8-phosphate
+ phosphatase; Provisional; Region: PRK09484"
+ /db_xref="CDD:181898"
+ misc_feature complement(4233412..4233759)
+ /locus_tag="SARI_04309"
+ /note="HAD-superfamily hydrolase, subfamily IIIA; Region:
+ HAD-SF-IIIA; TIGR01662"
+ /db_xref="CDD:233517"
+ gene complement(4233858..4234844)
+ /locus_tag="SARI_04310"
+ CDS complement(4233858..4234844)
+ /locus_tag="SARI_04310"
+ /inference="protein motif:HMMPfam:IPR000644"
+ /inference="protein motif:HMMPfam:IPR001347"
+ /inference="protein motif:HMMTigr:IPR004800"
+ /inference="similar to AA sequence:INSD:AAL22184.1"
+ /note="'KEGG: stm:STM3315 2.4e-169 yrbH; putative sugar
+ phosphate isomerase K06041;
+ COG: COG0794 Predicted sugar phosphate isomerase involved
+ in capsule formation;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="D-arabinose 5-phosphate isomerase"
+ /protein_id="YP_001573234.1"
+ /db_xref="GI:161506122"
+ /db_xref="InterPro:IPR000644"
+ /db_xref="InterPro:IPR001347"
+ /db_xref="InterPro:IPR004800"
+ /translation="MSHLALQPGFDFQQAGKEVLEIEREGLAELDQYINQNFTLACEK
+ MFNCTGKVVVMGMGKSGHIGRKMAATFASTGTSSFFVHPGEAAHGDLGMVTPQDVVIA
+ ISNSGESSEIAALIPVLKRMHVPLICITGRPESSMARAADVHLCVKVPKEACPLGLAP
+ TSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGALGRKLLLRVSDIMHTGDEIPH
+ VNKQASLRDALLEITRKNLGMTVICDESMKIDGIFTDGDLRRVFDMGGDMRQLGIADV
+ MTPGGIRVRPGILAVDALNLMQSRHITSVLVADGDQLLGVLHMHDLLRAGVV"
+ misc_feature complement(4233861..4234838)
+ /locus_tag="SARI_04310"
+ /note="D-arabinose 5-phosphate isomerase; Provisional;
+ Region: PRK10892"
+ /db_xref="CDD:182814"
+ misc_feature complement(4234314..4234667)
+ /locus_tag="SARI_04310"
+ /note="KpsF-like protein. KpsF is an arabinose-5-phosphate
+ isomerase which contains SIS (Sugar ISomerase) domains.
+ SIS domains are found in many phosphosugar isomerases and
+ phosphosugar binding proteins. KpsF catalyzes the
+ reversible reaction of ribulose...; Region: SIS_Kpsf;
+ cd05014"
+ /db_xref="CDD:240145"
+ misc_feature complement(order(4234533..4234535,4234665..4234667))
+ /locus_tag="SARI_04310"
+ /note="putative active site [active]"
+ /db_xref="CDD:240145"
+ misc_feature complement(4233870..4234208)
+ /locus_tag="SARI_04310"
+ /note="This cd contains two tandem repeats of the
+ cystathionine beta-synthase (CBS pair) domains associated
+ with KpsF/GutQ domains in the API [A5P (D-arabinose
+ 5-phosphate) isomerase] protein. These APIs catalyze the
+ conversion of the pentose pathway...; Region:
+ CBS_pair_KpsF_GutQ_assoc; cd04604"
+ /db_xref="CDD:239977"
+ gene complement(4234858..4235835)
+ /locus_tag="SARI_04311"
+ CDS complement(4234858..4235835)
+ /locus_tag="SARI_04311"
+ /inference="protein motif:HMMPanther:IPR004481"
+ /inference="protein motif:HMMPfam:IPR004837"
+ /inference="protein motif:HMMTigr:IPR004481"
+ /inference="similar to AA sequence:REFSEQ:YP_152318.1"
+ /note="YrbG; inner membrane protein involved in cell
+ envelope integrity; putative sodium ion/calcium ion
+ exchanger; in E. coli it is non essential for cell
+ viability; member of the YRBG family of cation/Ca2+
+ exchangers"
+ /codon_start=1
+ /transl_table=11
+ /product="putative calcium/sodium:proton antiporter"
+ /protein_id="YP_001573235.1"
+ /db_xref="GI:161506123"
+ /db_xref="InterPro:IPR004481"
+ /db_xref="InterPro:IPR004837"
+ /translation="MLLAMALLIIGLLLVAYGADRLVFAASILCRTFGIPPLIIGMTV
+ VSIGTSLPEIIVSLAASLHGQLDLAVGAALGSNITNILLILGLAALVRPFTVHSDVLR
+ RELPLMLFVSVVAGSVLHDGQLSRSDGIFLLLLAVLWLLFIVKIARLAERQGNDSLTR
+ EQLAELPREGGLPVAFLWLGISLVIMPMATRMVIDNATVLANYFAMSELALGLTVIAV
+ GTSLPELATAIAGVRKGEHDIAVGNIIGANIFNLAIVLGLPALITPGDINPLAFGRDY
+ SVMLLVSVVFALLCWRHPRQIGRGAGILLTVGFIVWLAMLYWLSPLFVG"
+ misc_feature complement(4234861..4235793)
+ /locus_tag="SARI_04311"
+ /note="putative calcium/sodium:proton antiporter;
+ Provisional; Region: PRK10734"
+ /db_xref="CDD:182684"
+ misc_feature complement(4235443..4235793)
+ /locus_tag="SARI_04311"
+ /note="Sodium/calcium exchanger protein; Region: Na_Ca_ex;
+ pfam01699"
+ /db_xref="CDD:216653"
+ misc_feature complement(4234888..4235274)
+ /locus_tag="SARI_04311"
+ /note="Sodium/calcium exchanger protein; Region: Na_Ca_ex;
+ pfam01699"
+ /db_xref="CDD:216653"
+ gene 4236048..4236860
+ /locus_tag="SARI_04312"
+ CDS 4236048..4236860
+ /locus_tag="SARI_04312"
+ /inference="protein motif:BlastProDom:IPR003439"
+ /inference="protein motif:HMMPfam:IPR003439"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:ScanRegExp:IPR003439"
+ /inference="similar to AA sequence:REFSEQ:YP_218238.1"
+ /note="ATP-binding subunit of a putative ABC toluene
+ efflux transporter"
+ /codon_start=1
+ /transl_table=11
+ /product="putative ABC transporter ATP-binding protein
+ YrbF"
+ /protein_id="YP_001573236.1"
+ /db_xref="GI:161506124"
+ /db_xref="InterPro:IPR003439"
+ /db_xref="InterPro:IPR003593"
+ /translation="MGQSVANLVDMRNVSFSRGERCIFDNISLTVPRGKITAIMGPSG
+ IGKTTLLRLIGGQIPPDKGEILFDGENVPAMSRSRLYTVRKRMSMLFQSGALFTDMNV
+ FDNVAYPLREHTNLPAPLLKSVVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIA
+ LEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAWIM
+ ADKKIVAHGSAQALQENTDPRVRQFLDGIADGPVPFRYPAGDYHLDLLETGS"
+ misc_feature 4236051..4236857
+ /locus_tag="SARI_04312"
+ /note="putative ABC transporter ATP-binding protein YrbF;
+ Provisional; Region: PRK11831"
+ /db_xref="CDD:236997"
+ misc_feature 4236072..4236776
+ /locus_tag="SARI_04312"
+ /note="ATP-binding cassette transport system involved in
+ resistant to organic solvents; Region:
+ ABC_Org_Solvent_Resistant; cd03261"
+ /db_xref="CDD:213228"
+ misc_feature 4236168..4236191
+ /locus_tag="SARI_04312"
+ /note="Walker A/P-loop; other site"
+ /db_xref="CDD:213228"
+ misc_feature order(4236177..4236182,4236186..4236194,4236321..4236323,
+ 4236552..4236557,4236654..4236656)
+ /locus_tag="SARI_04312"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:213228"
+ misc_feature 4236312..4236323
+ /locus_tag="SARI_04312"
+ /note="Q-loop/lid; other site"
+ /db_xref="CDD:213228"
+ misc_feature 4236480..4236509
+ /locus_tag="SARI_04312"
+ /note="ABC transporter signature motif; other site"
+ /db_xref="CDD:213228"
+ misc_feature 4236540..4236557
+ /locus_tag="SARI_04312"
+ /note="Walker B; other site"
+ /db_xref="CDD:213228"
+ misc_feature 4236564..4236575
+ /locus_tag="SARI_04312"
+ /note="D-loop; other site"
+ /db_xref="CDD:213228"
+ misc_feature 4236642..4236662
+ /locus_tag="SARI_04312"
+ /note="H-loop/switch region; other site"
+ /db_xref="CDD:213228"
+ gene 4236868..4237650
+ /locus_tag="SARI_04313"
+ CDS 4236868..4237650
+ /locus_tag="SARI_04313"
+ /inference="protein motif:HMMPfam:IPR003453"
+ /inference="protein motif:HMMTigr:IPR003453"
+ /inference="similar to AA sequence:REFSEQ:NP_457691.1"
+ /note="'COG: COG0767 ABC-type transport system involved in
+ resistance to organic solvents, permease component;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573237.1"
+ /db_xref="GI:161506125"
+ /db_xref="InterPro:IPR003453"
+ /translation="MLLNALASLGRSGIKTVRTFGRAGLMLFNAVIGKPEFRKHAPLL
+ VRQLYNVGVLSMLIIVVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPV
+ VAALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTI
+ IFVAVGIWGGSLVGVSWKGIDAGFFWSAMQNAVDWRMDLVNCLIKSVVFAITVTWIAL
+ FNGYDAIPTSAGISRATTRTVVHASLAVLGLDFVLTALMFGN"
+ misc_feature 4236868..4237647
+ /locus_tag="SARI_04313"
+ /note="ABC-type transport system involved in resistance to
+ organic solvents, permease component [Secondary
+ metabolites biosynthesis, transport, and catabolism];
+ Region: Ttg2B; COG0767"
+ /db_xref="CDD:223838"
+ misc_feature 4236880..4237647
+ /locus_tag="SARI_04313"
+ /note="conserved hypothetical integral membrane protein;
+ Region: TIGR00056"
+ /db_xref="CDD:129166"
+ gene 4237655..4238206
+ /locus_tag="SARI_04314"
+ CDS 4237655..4238206
+ /locus_tag="SARI_04314"
+ /inference="protein motif:HMMPfam:IPR003399"
+ /inference="protein motif:superfamily:IPR011033"
+ /inference="similar to AA sequence:INSD:AAX67155.1"
+ /note="'COG: COG1463 ABC-type transport system involved in
+ resistance to organic solvents, periplasmic component;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573238.1"
+ /db_xref="GI:161506126"
+ /db_xref="InterPro:IPR003399"
+ /db_xref="InterPro:IPR011033"
+ /translation="MQTKKNEIWVGVFLLVALLAALFVCLKAANVTSMRTEPTYKVYA
+ TFDNIGGLKVRSPVRIGGVVVGRVEDISLDPKTYLPRVTLDIEERYNHIPDTSSLSIR
+ TSGLLGEQYLSLNVGFEDPELGTSILKDGSTIQDTKSAMVLEDMIGQFLYNSKGDDNK
+ NSGDAPAAKEGNTEATTPAGATK"
+ misc_feature 4237655..>4238191
+ /locus_tag="SARI_04314"
+ /note="ABC-type transport system involved in resistance to
+ organic solvents, periplasmic component [Secondary
+ metabolites biosynthesis, transport, and catabolism];
+ Region: Ttg2C; COG1463"
+ /db_xref="CDD:224380"
+ misc_feature 4237766..4238005
+ /locus_tag="SARI_04314"
+ /note="mce related protein; Region: MCE; pfam02470"
+ /db_xref="CDD:217055"
+ gene 4238225..4238860
+ /locus_tag="SARI_04315"
+ CDS 4238225..4238860
+ /locus_tag="SARI_04315"
+ /inference="protein motif:HMMPfam:IPR008869"
+ /inference="similar to AA sequence:INSD:AAO70763.1"
+ /note="'COG: COG2854 ABC-type transport system involved in
+ resistance to organic solvents, auxiliary component;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573239.1"
+ /db_xref="GI:161506127"
+ /db_xref="InterPro:IPR008869"
+ /translation="MFKRLMMVALLVIAPLSAATAADQSNPYKLMNEAAQKTFDRLKN
+ EQPKIRANPDYLREVVAQELLPYVQVKYAGALVLGRYYKDATPAQREAYFAAFREYLK
+ QAYGQALAMYHGQTYQIAPEQPLGNATIVPIRVTIIDPNGRPPVRLDFQWRKNSQTGN
+ WQAYDMIAEGVSMITTKQNEWSDLLRTKGIDGLTAQLKSISKQKITLDEKQ"
+ misc_feature 4238225..4238857
+ /locus_tag="SARI_04315"
+ /note="ABC transporter periplasmic binding protein MlaC;
+ Provisional; Region: PRK15117"
+ /db_xref="CDD:237912"
+ gene 4238860..4239156
+ /locus_tag="SARI_04316"
+ CDS 4238860..4239156
+ /locus_tag="SARI_04316"
+ /inference="protein motif:Gene3D:IPR002645"
+ /inference="protein motif:HMMPfam:IPR002645"
+ /inference="protein motif:superfamily:IPR002645"
+ /inference="similar to AA sequence:REFSEQ:YP_152313.1"
+ /note="'COG: COG3113 Predicted NTP binding protein
+ (contains STAS domain);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573240.1"
+ /db_xref="GI:161506128"
+ /db_xref="InterPro:IPR002645"
+ /translation="MTPQLTWTREAGTLMLAGELDQDVLTPLWDARVEAMTGVTRIDM
+ SQISRVDTGGLALLAHLVNQAKKQGNAVSLSGVNDKVYALAQLYNLPEDVLPRM"
+ misc_feature 4238869..4239129
+ /locus_tag="SARI_04316"
+ /note="Sulphate Transporter and Anti-Sigma factor
+ antagonist) domain of anti-anti-sigma factors, key
+ regulators of anti-sigma factors by phosphorylation;
+ Region: STAS_anti-anti-sigma_factors; cd07043"
+ /db_xref="CDD:132914"
+ misc_feature order(4238914..4238916,4238920..4238928,4238944..4238946,
+ 4239004..4239006,4239010..4239018,4239022..4239030,
+ 4239037..4239042,4239106..4239108,4239118..4239123,
+ 4239127..4239129)
+ /locus_tag="SARI_04316"
+ /note="anti sigma factor interaction site; other site"
+ /db_xref="CDD:132914"
+ misc_feature 4239013..4239015
+ /locus_tag="SARI_04316"
+ /note="regulatory phosphorylation site [posttranslational
+ modification]; other site"
+ /db_xref="CDD:132914"
+ gene 4239317..4239610
+ /locus_tag="SARI_04317"
+ CDS 4239317..4239610
+ /locus_tag="SARI_04317"
+ /inference="protein motif:HMMPanther:IPR002634"
+ /inference="protein motif:HMMPfam:IPR002634"
+ /inference="similar to AA sequence:REFSEQ:NP_806901.1"
+ /note="'COG: COG5007 Predicted transcriptional regulator,
+ BolA superfamily;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573241.1"
+ /db_xref="GI:161506129"
+ /db_xref="InterPro:IPR002634"
+ /translation="MVGCFHYLTNKEPMENDEIQSVLMNALSLQEVHVSGDGSHFQVI
+ AVGEMFDGMSRVKKQQTVYGPLMEYIADNRIHAVSIKAYTPAEWARDRKLNGF"
+ misc_feature 4239356..4239595
+ /locus_tag="SARI_04317"
+ /note="Predicted transcriptional regulator, BolA
+ superfamily [Transcription]; Region: COG5007"
+ /db_xref="CDD:227340"
+ gene 4239664..4240923
+ /locus_tag="SARI_04318"
+ CDS 4239664..4240923
+ /locus_tag="SARI_04318"
+ /inference="protein motif:BlastProDom:IPR001986"
+ /inference="protein motif:Gene3D:IPR001986"
+ /inference="protein motif:HMMPanther:IPR005750"
+ /inference="protein motif:HMMPfam:IPR001986"
+ /inference="protein motif:HMMTigr:IPR005750"
+ /inference="protein motif:superfamily:IPR013792"
+ /inference="similar to AA sequence:INSD:AAX67151.1"
+ /note="adds enolpyruvyl to UDP-N-acetylglucosamine as a
+ component of cell wall formation; gram-positive bacteria
+ have 2 copies of MurA which are active"
+ /codon_start=1
+ /transl_table=11
+ /product="UDP-N-acetylglucosamine
+ 1-carboxyvinyltransferase"
+ /protein_id="YP_001573242.1"
+ /db_xref="GI:161506130"
+ /db_xref="InterPro:IPR001986"
+ /db_xref="InterPro:IPR005750"
+ /db_xref="InterPro:IPR013792"
+ /translation="MDKFRVQGPTTLQGEVTISGAKNAALPILFAALLAEEPVEIQNV
+ PKLKDVDTSMKLLSQLGAKVERNGSVHIDASQVNVFCAPYDLVKTMRASIWALGPLVA
+ RFGQGQVSLPGGCTIGARPVDLHITGLEQLGATIKLEEGYVKASVDGRLKGAHIVMDK
+ VSVGATVTIMCAATLAEGTTIIENAAREPEIVDTANFLVALGAKISGQGTDRITIEGV
+ EHLGGGIYRVLPDRIETGTFLVAAAISRGKIICRNAQPDTLDAVLAKLRDAGADIEVG
+ EDWISLDMHGKRPKAVNVRTAPHPAFPTDMQAQFTLLNLVAEGTGFITETVFENRFMH
+ VPELSRMGARAEIESNTVICHGVETLSGAQVMATDLRASASLVLAGCIAEGTTVVDRI
+ YHIDRGYERIEDKLRALGAHIERVKGE"
+ misc_feature 4239664..4240908
+ /locus_tag="SARI_04318"
+ /note="UDP-N-acetylglucosamine 1-carboxyvinyltransferase;
+ Region: murA; TIGR01072"
+ /db_xref="CDD:162190"
+ misc_feature 4239697..4240890
+ /locus_tag="SARI_04318"
+ /note="UDP-N-acetylglucosamine enolpyruvyl transferase
+ catalyzes enolpyruvyl transfer as part of the first step
+ in the biosynthesis of peptidoglycan, a component of the
+ bacterial cell wall. The reaction is phosphoenolpyruvate +
+ UDP-N-acetyl-D-glucosamine =...; Region: UdpNAET; cd01555"
+ /db_xref="CDD:238796"
+ misc_feature order(4239715..4239726,4240345..4240356)
+ /locus_tag="SARI_04318"
+ /note="hinge; other site"
+ /db_xref="CDD:238796"
+ misc_feature order(4239730..4239732,4239934..4239936,4239946..4239948,
+ 4240021..4240038,4240141..4240143,4240150..4240155,
+ 4240576..4240578)
+ /locus_tag="SARI_04318"
+ /note="active site"
+ /db_xref="CDD:238796"
+ unsure 4240879..4240951
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(4240987..4241268)
+ /locus_tag="SARI_04319"
+ CDS complement(4240987..4241268)
+ /locus_tag="SARI_04319"
+ /inference="protein motif:superfamily:IPR010982"
+ /inference="similar to AA sequence:INSD:AAZ76166.1"
+ /note="activator of maltose metabolism genes"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional regulator Nlp"
+ /protein_id="YP_001573243.1"
+ /db_xref="GI:161506131"
+ /db_xref="InterPro:IPR010982"
+ /translation="MESKLIDWHPADIIAGLRKKGTSMAAESRRNGLSSSTLANALTR
+ PWPKGELIIAKALGTEPWVIWPSRYHDPHTHEFIDRTRLMRARNKGKQI"
+ misc_feature complement(4240993..4241268)
+ /locus_tag="SARI_04319"
+ /note="DNA-binding transcriptional regulator Nlp;
+ Provisional; Region: PRK10344"
+ /db_xref="CDD:182394"
+ gene complement(4241494..4242465)
+ /locus_tag="SARI_04320"
+ CDS complement(4241494..4242465)
+ /locus_tag="SARI_04320"
+ /inference="protein motif:HMMPfam:IPR000092"
+ /inference="protein motif:ScanRegExp:IPR000092"
+ /inference="protein motif:superfamily:IPR008949"
+ /inference="similar to AA sequence:REFSEQ:YP_218230.1"
+ /note="'KEGG: sec:SC3243 6.4e-201 ispB; octaprenyl
+ diphosphate synthase K02523;
+ COG: COG0142 Geranylgeranyl pyrophosphate synthase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573244.2"
+ /db_xref="GI:448236294"
+ /db_xref="InterPro:IPR000092"
+ /db_xref="InterPro:IPR008949"
+ /translation="MNLEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGG
+ KRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAA
+ FGNAASVLVGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITE
+ ENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSA
+ DGKHLGKNVGDDLNEGKPTLPLLHAMRHGTPEQSTMIRTAIEQGNGRHLLDPVLEAMT
+ TCGSLEWTRQRAEEEADKAISALQILPDTPWREALIGLAHIAVQRDR"
+ misc_feature complement(4241500..4242456)
+ /locus_tag="SARI_04320"
+ /note="Geranylgeranyl pyrophosphate synthase [Coenzyme
+ metabolism]; Region: IspA; COG0142"
+ /db_xref="CDD:223220"
+ misc_feature complement(4241503..4242387)
+ /locus_tag="SARI_04320"
+ /note="Trans-Isoprenyl Diphosphate Synthases,
+ head-to-tail; Region: Trans_IPPS_HT; cd00685"
+ /db_xref="CDD:173833"
+ misc_feature complement(order(4241761..4241763,4241776..4241778,
+ 4241791..4241793,4241821..4241823,4241830..4241835,
+ 4241944..4241946,4241953..4241958,4242019..4242021,
+ 4242028..4242030,4242184..4242189,4242202..4242207,
+ 4242211..4242219,4242223..4242231,4242238..4242240))
+ /locus_tag="SARI_04320"
+ /note="substrate binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:173833"
+ misc_feature complement(4242202..4242231)
+ /locus_tag="SARI_04320"
+ /note="chain length determination region; other site"
+ /db_xref="CDD:173833"
+ misc_feature complement(order(4241761..4241763,4241776..4241778,
+ 4241791..4241793,4241821..4241823,4241830..4241835,
+ 4241956..4241958,4242019..4242021,4242184..4242189,
+ 4242202..4242204,4242211..4242216))
+ /locus_tag="SARI_04320"
+ /note="substrate-Mg2+ binding site; other site"
+ /db_xref="CDD:173833"
+ misc_feature complement(order(4241830..4241835,4241956..4241958,
+ 4242184..4242189,4242202..4242204,4242211..4242216))
+ /locus_tag="SARI_04320"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:173833"
+ misc_feature complement(order(4241956..4241958,4242019..4242021,
+ 4242184..4242189,4242202..4242204,4242211..4242216))
+ /locus_tag="SARI_04320"
+ /note="aspartate-rich region 1; other site"
+ /db_xref="CDD:173833"
+ misc_feature complement(order(4241755..4241769,4241776..4241793,
+ 4241809..4241814,4242154..4242198))
+ /locus_tag="SARI_04320"
+ /note="active site lid residues [active]"
+ /db_xref="CDD:173833"
+ misc_feature complement(order(4241761..4241763,4241776..4241778,
+ 4241791..4241793,4241821..4241823,4241830..4241835))
+ /locus_tag="SARI_04320"
+ /note="aspartate-rich region 2; other site"
+ /db_xref="CDD:173833"
+ unsure 4242918..4242947
+ /note="Sequence derived from one plasmid subclone"
+ gene 4243055..4243312
+ /gene="rpmA"
+ /locus_tag="SARI_04321"
+ CDS 4243055..4243312
+ /gene="rpmA"
+ /locus_tag="SARI_04321"
+ /inference="protein motif:BlastProDom:IPR001684"
+ /inference="protein motif:HMMPanther:IPR001684"
+ /inference="protein motif:HMMPfam:IPR001684"
+ /inference="protein motif:HMMTigr:IPR001684"
+ /inference="protein motif:ScanRegExp:IPR001684"
+ /inference="similar to AA sequence:INSD:AAX67147.1"
+ /note="involved in the peptidyltransferase reaction during
+ translation"
+ /codon_start=1
+ /transl_table=11
+ /product="50S ribosomal protein L27"
+ /protein_id="YP_001573245.1"
+ /db_xref="GI:161506133"
+ /db_xref="InterPro:IPR001684"
+ /translation="MAHKKAGGSTRNGRDSEAKRLGVKRFGGEAVLAGSIIVRQRGTK
+ FHAGTNVGCGRDHTLFAKADGKVKFEVKGPKNRKYISIVAE"
+ misc_feature 4243055..4243303
+ /gene="rpmA"
+ /locus_tag="SARI_04321"
+ /note="50S ribosomal protein L27; Validated; Region: rpmA;
+ PRK05435"
+ /db_xref="CDD:235464"
+ gene 4243409..4244407
+ /locus_tag="SARI_04322"
+ CDS 4243409..4244407
+ /locus_tag="SARI_04322"
+ /inference="protein motif:HMMPfam:IPR000620"
+ /inference="similar to AA sequence:INSD:AAX67146.1"
+ /note="'COG: COG0697 Permeases of the drug/metabolite
+ transporter (DMT) superfamily;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573246.1"
+ /db_xref="GI:161506134"
+ /db_xref="InterPro:IPR000620"
+ /translation="MPLMGLCRKYGMKQQAGIGILLALTTAMCWGALPIAMKQVLEVM
+ EPPTIVFYRFLMASIGLGAILAVKRKLPPLRIFRKPRWLVLLAIATCGLFGNFILFSS
+ SLQYLSPTASQVIGQLSPVGMMVASVFILKEKMRGTQVIGALMLLSGLVMFFNTSLIE
+ IFTRLTDYTWGVIFGVGAAMVWVSYGVAQKVLLRRLASQQILFLLYTLCTIALLPLAK
+ PMVIAQLSDWQLVCLIFCGLNTLVGYGALAEAMARWQAAQVSAIITLTPLFTLLFSDL
+ LSMAWPDFFARPMLNLLGYLGAFVVVAGAMYSAIGHRIWGGLRKHETVVSQPRSGE"
+ misc_feature 4243442..4244353
+ /locus_tag="SARI_04322"
+ /note="Permeases of the drug/metabolite transporter (DMT)
+ superfamily [Carbohydrate transport and metabolism / Amino
+ acid transport and metabolism / General function
+ prediction only]; Region: RhaT; COG0697"
+ /db_xref="CDD:223769"
+ misc_feature 4243490..4243870
+ /locus_tag="SARI_04322"
+ /note="EamA-like transporter family; Region: EamA;
+ pfam00892"
+ /db_xref="CDD:216178"
+ misc_feature 4243946..>4244197
+ /locus_tag="SARI_04322"
+ /note="EamA-like transporter family; Region: EamA;
+ pfam00892"
+ /db_xref="CDD:216178"
+ unsure 4243983..4244957
+ /note="Sequence derived from one plasmid subclone"
+ gene 4244423..4245598
+ /gene="obgE"
+ /locus_tag="SARI_04323"
+ CDS 4244423..4245598
+ /gene="obgE"
+ /locus_tag="SARI_04323"
+ /inference="protein motif:HMMPfam:IPR002917"
+ /inference="protein motif:HMMPfam:IPR006169"
+ /inference="protein motif:HMMTigr:IPR005225"
+ /inference="protein motif:ScanRegExp:IPR006074"
+ /inference="similar to AA sequence:INSD:AAV78993.1"
+ /note="essential GTPase; exhibits high exchange rate for
+ GTP/GDP; associates with 50S ribosomal subunit; involved
+ in regulation of chromosomal replication"
+ /codon_start=1
+ /transl_table=11
+ /product="GTPase ObgE"
+ /protein_id="YP_001573247.1"
+ /db_xref="GI:161506135"
+ /db_xref="InterPro:IPR002917"
+ /db_xref="InterPro:IPR005225"
+ /db_xref="InterPro:IPR006074"
+ /db_xref="InterPro:IPR006169"
+ /translation="MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGD
+ VWLEADENLNTLIDYRFEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTG
+ ETMGDMTKHGQRLLVAKGGWHGLGNTRFKSSVNRTPRQKTNGTPGDKRDLLLELMLLA
+ DVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDSEKSFVVADIPGLI
+ EGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGSDPVENARIIIGELEKYSQDLAAK
+ PRWLVFNKIDLMDKTEAEEKAKSIAEALGWEGKYYLISAASQLGVKDLCWDVMTFIIE
+ NPIAQAEEAKQPEKVEFMWDDYHRQQLDEVAAEAEDEEWDDDWDEDDEEGVEFIYKR"
+ misc_feature 4244423..4245595
+ /gene="obgE"
+ /locus_tag="SARI_04323"
+ /note="GTPase CgtA; Reviewed; Region: obgE; PRK12298"
+ /db_xref="CDD:237047"
+ misc_feature 4244429..4244875
+ /gene="obgE"
+ /locus_tag="SARI_04323"
+ /note="GTP1/OBG; Region: GTP1_OBG; pfam01018"
+ /db_xref="CDD:110047"
+ misc_feature 4244900..4245418
+ /gene="obgE"
+ /locus_tag="SARI_04323"
+ /note="Obg GTPase; Region: Obg; cd01898"
+ /db_xref="CDD:206685"
+ misc_feature 4244918..4244941
+ /gene="obgE"
+ /locus_tag="SARI_04323"
+ /note="G1 box; other site"
+ /db_xref="CDD:206685"
+ misc_feature order(4244927..4244944,4245269..4245274,4245278..4245280,
+ 4245362..4245367)
+ /gene="obgE"
+ /locus_tag="SARI_04323"
+ /note="GTP/Mg2+ binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:206685"
+ misc_feature 4244963..4245010
+ /gene="obgE"
+ /locus_tag="SARI_04323"
+ /note="Switch I region; other site"
+ /db_xref="CDD:206685"
+ misc_feature 4244999..4245001
+ /gene="obgE"
+ /locus_tag="SARI_04323"
+ /note="G2 box; other site"
+ /db_xref="CDD:206685"
+ misc_feature 4245059..4245070
+ /gene="obgE"
+ /locus_tag="SARI_04323"
+ /note="G3 box; other site"
+ /db_xref="CDD:206685"
+ misc_feature order(4245068..4245091,4245098..4245136)
+ /gene="obgE"
+ /locus_tag="SARI_04323"
+ /note="Switch II region; other site"
+ /db_xref="CDD:206685"
+ misc_feature 4245269..4245280
+ /gene="obgE"
+ /locus_tag="SARI_04323"
+ /note="G4 box; other site"
+ /db_xref="CDD:206685"
+ misc_feature 4245362..4245370
+ /gene="obgE"
+ /locus_tag="SARI_04323"
+ /note="G5 box; other site"
+ /db_xref="CDD:206685"
+ gene complement(4245595..4245720)
+ /locus_tag="SARI_04324"
+ CDS complement(4245595..4245720)
+ /locus_tag="SARI_04324"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573248.1"
+ /db_xref="GI:161506136"
+ /translation="MPDGDAKASYPAYTEPNKTGRKCGPLHIVGGISASAIRLRD"
+ gene complement(4245729..4247162)
+ /locus_tag="SARI_04325"
+ CDS complement(4245729..4247162)
+ /locus_tag="SARI_04325"
+ /inference="protein motif:FPrintScan:IPR000667"
+ /inference="protein motif:HMMPfam:IPR000667"
+ /inference="protein motif:HMMTigr:IPR000667"
+ /inference="protein motif:superfamily:IPR012338"
+ /inference="similar to AA sequence:REFSEQ:NP_457679.1"
+ /note="'penicillin binding protein 4; penicillin
+ sensitive; catalyzes the formation of D-alanine from
+ D-alanyl-D-alanine; one of four, DD-carboxypeptidase
+ low-molecular weight penicillin-binding proteins that
+ remove terminal D-alanine from pentapeptide side chains'"
+ /codon_start=1
+ /transl_table=11
+ /product="D-alanyl-D-alanine
+ carboxypeptidase/endopeptidase"
+ /protein_id="YP_001573249.1"
+ /db_xref="GI:161506137"
+ /db_xref="InterPro:IPR000667"
+ /db_xref="InterPro:IPR012338"
+ /translation="MRFSRFIIGLTTSIAFSVQAANIDEYIKQLPAGANLALMVQKVG
+ APAPVIDYHGQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGSVDNGILKGDLI
+ ARFGGDPTLKRQDIRNMVATLKKSGVTQIAGNVLIDTSIFASHDKAPGWPWNDLTQCF
+ SAPPAAAIVDRNCFSVSLYSAQKPNDLAFIRVASYYPVTMFSQVRTLPRGSAEAQYCE
+ LDVVPGDLNRYTLTGCLPQRADPLPLAFAIQDGASYAGAILKQELKEVGITYRGTLLR
+ QTQVNEPGTLVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHVRFNVPGTWRAGSD
+ AVRQILRQQAGIDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPL
+ AGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAV
+ PPADQRNRRIPLVRFESRLYKDIYQNN"
+ misc_feature complement(4245732..4247162)
+ /locus_tag="SARI_04325"
+ /note="D-alanyl-D-alanine carboxypeptidase/endopeptidase;
+ Provisional; Region: PRK11113"
+ /db_xref="CDD:182972"
+ misc_feature complement(4245822..4247024)
+ /locus_tag="SARI_04325"
+ /note="D-alanyl-D-alanine carboxypeptidase, serine-type,
+ PBP4 family; Region: PBP4; TIGR00666"
+ /db_xref="CDD:200042"
+ unsure 4246700..4247138
+ /note="Sequence derived from one plasmid subclone"
+ gene 4247409..4247885
+ /gene="greA"
+ /locus_tag="SARI_04326"
+ CDS 4247409..4247885
+ /gene="greA"
+ /locus_tag="SARI_04326"
+ /inference="protein motif:BlastProDom:IPR001437"
+ /inference="protein motif:Gene3D:IPR001437"
+ /inference="protein motif:HMMPfam:IPR001437"
+ /inference="protein motif:HMMPIR:IPR012243"
+ /inference="protein motif:HMMTigr:IPR006359"
+ /inference="protein motif:ScanRegExp:IPR001437"
+ /inference="protein motif:superfamily:IPR001437"
+ /inference="similar to AA sequence:INSD:AAX67143.1"
+ /note="'necessary for efficient RNA polymerase
+ transcription elongation past template-encoded arresting
+ sites; arresting sites in DNA have the property of
+ trapping a certain fraction of elongating RNA polymerases
+ that pass through, resulting in locked ternary complexes.
+ Cleavage of the nascent transcript by cleavage factors
+ such as GreA or GreB allows the resumption of elongation
+ from the new 3'terminus'"
+ /codon_start=1
+ /transl_table=11
+ /product="transcription elongation factor GreA"
+ /protein_id="YP_001573250.1"
+ /db_xref="GI:161506138"
+ /db_xref="InterPro:IPR001437"
+ /db_xref="InterPro:IPR006359"
+ /db_xref="InterPro:IPR012243"
+ /translation="MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKE
+ NAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMANNGRVIFGATVTVLNLDTDEE
+ QTYRIVGDDEADFKQNLISVNSPIARGLIGKEQDDVVVIKTPGGDVEYEVLKVEYL"
+ misc_feature 4247409..4247879
+ /gene="greA"
+ /locus_tag="SARI_04326"
+ /note="transcription elongation factor GreA; Reviewed;
+ Region: greA; PRK00226"
+ /db_xref="CDD:234693"
+ misc_feature 4247418..4247630
+ /gene="greA"
+ /locus_tag="SARI_04326"
+ /note="Transcription elongation factor, N-terminal;
+ Region: GreA_GreB_N; pfam03449"
+ /db_xref="CDD:217565"
+ misc_feature 4247649..4247879
+ /gene="greA"
+ /locus_tag="SARI_04326"
+ /note="Transcription elongation factor, GreA/GreB, C-term;
+ Region: GreA_GreB; pfam01272"
+ /db_xref="CDD:201702"
+ gene complement(4248041..4248373)
+ /locus_tag="SARI_04327"
+ CDS complement(4248041..4248373)
+ /locus_tag="SARI_04327"
+ /inference="protein motif:BlastProDom:IPR001890"
+ /inference="protein motif:HMMPfam:IPR001890"
+ /inference="protein motif:HMMTigr:IPR001890"
+ /inference="protein motif:ScanRegExp:IPR001890"
+ /inference="similar to AA sequence:REFSEQ:YP_218223.1"
+ /note="RNA binding protein found associated to pre-50S
+ subunit of the ribosome; putative role in ribosome
+ assembly; necessary for optimal growth but not cell
+ viability"
+ /codon_start=1
+ /transl_table=11
+ /product="RNA-binding protein YhbY"
+ /protein_id="YP_001573251.1"
+ /db_xref="GI:161506139"
+ /db_xref="InterPro:IPR001890"
+ /translation="MTRFQSQRKQKYTMNLSTKQKQHLKGLAHPLKPVVMLGNNGLTE
+ GVLAEIEQALEHHELIKVKIASEDRETKTLIVDAIVRETGACNVQVIGKTLVLYRPTK
+ ERKISLPR"
+ misc_feature complement(4248044..4248334)
+ /locus_tag="SARI_04327"
+ /note="RNA-binding protein YhbY; Provisional; Region:
+ PRK10343"
+ /db_xref="CDD:182393"
+ gene 4248461..4249087
+ /gene="rrmJ"
+ /locus_tag="SARI_04328"
+ CDS 4248461..4249087
+ /gene="rrmJ"
+ /locus_tag="SARI_04328"
+ /inference="protein motif:HMMPfam:IPR002877"
+ /inference="protein motif:HMMTigr:IPR004512"
+ /inference="similar to AA sequence:INSD:ABF05260.1"
+ /note="Specifically methylates the uridine in position
+ 2552 of 23S rRNA in the fully assembled 50S ribosomal
+ subunit"
+ /codon_start=1
+ /transl_table=11
+ /product="23S rRNA methyltransferase J"
+ /protein_id="YP_001573252.1"
+ /db_xref="GI:161506140"
+ /db_xref="InterPro:IPR002877"
+ /db_xref="InterPro:IPR004512"
+ /translation="MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQ
+ SDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGRGRIIACDLLPMDPIVGVDFLQGDFRD
+ ELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGS
+ FVVKVFQGEGFDEYLREIRSLFTKVKVRKPDSSRARSREVYIVATGRK"
+ misc_feature 4248479..4249084
+ /gene="rrmJ"
+ /locus_tag="SARI_04328"
+ /note="23S rRNA methylase [Translation, ribosomal
+ structure and biogenesis]; Region: FtsJ; COG0293"
+ /db_xref="CDD:223370"
+ misc_feature 4248620..4248958
+ /gene="rrmJ"
+ /locus_tag="SARI_04328"
+ /note="S-adenosylmethionine-dependent methyltransferases
+ (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
+ that use S-adenosyl-L-methionine (SAM or AdoMet) as a
+ substrate for methyltransfer, creating the product
+ S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
+ cd02440"
+ /db_xref="CDD:100107"
+ misc_feature order(4248632..4248652,4248707..4248712,4248752..4248760,
+ 4248830..4248832)
+ /gene="rrmJ"
+ /locus_tag="SARI_04328"
+ /note="S-adenosylmethionine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:100107"
+ gene 4249191..4251125
+ /gene="hflB"
+ /locus_tag="SARI_04329"
+ CDS 4249191..4251125
+ /gene="hflB"
+ /locus_tag="SARI_04329"
+ /inference="protein motif:HMMPfam:IPR000642"
+ /inference="protein motif:HMMPfam:IPR003959"
+ /inference="protein motif:HMMPfam:IPR011546"
+ /inference="protein motif:HMMSmart:IPR003593"
+ /inference="protein motif:HMMTigr:IPR005936"
+ /inference="protein motif:ScanRegExp:IPR003960"
+ /note="inner membrane metalloprotease; may be involved in
+ degradation of aberrant cytoplasmic and membrane proteins"
+ /codon_start=1
+ /transl_table=11
+ /product="ATP-dependent metalloprotease"
+ /protein_id="YP_001573253.1"
+ /db_xref="GI:161506141"
+ /db_xref="InterPro:IPR000642"
+ /db_xref="InterPro:IPR003593"
+ /db_xref="InterPro:IPR003959"
+ /db_xref="InterPro:IPR003960"
+ /db_xref="InterPro:IPR005936"
+ /db_xref="InterPro:IPR011546"
+ /translation="MAKNLILWLVIAVVLMSVFQSFGPSESNGRKVDYSTFLQEVNQD
+ QVREARINGREINVTKKDSNRYTTYIPINDPKLLDNLLTKNVKVVGEPPEEPSLLASI
+ FISWFPMLLLIGVWIFFMRQMQGGGGKGAMSFGKSKARMLTEDQIKTTFADVAGCDEA
+ KEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISG
+ SDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLN
+ QMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVH
+ MRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKI
+ MMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLP
+ EGDAISASRQKLESQISTLYGGRLAEEIIYGVEHVSTGASNDIKVATNLARNMVTQWG
+ FSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQILTD
+ NMDILHAMKDALMKYETIDAPQIDDLMARREVRPPAGWEDPNGTNNSDSNGTPQAPRP
+ VDEPRTPNPGNTMSEQLGDK"
+ misc_feature 4249191..4251122
+ /gene="hflB"
+ /locus_tag="SARI_04329"
+ /note="ATP-dependent metalloprotease; Reviewed; Region:
+ hflB; PRK10733"
+ /db_xref="CDD:182683"
+ misc_feature 4249653..4250153
+ /gene="hflB"
+ /locus_tag="SARI_04329"
+ /note="The AAA+ (ATPases Associated with a wide variety of
+ cellular Activities) superfamily represents an ancient
+ group of ATPases belonging to the ASCE (for additional
+ strand, catalytic E) division of the P-loop NTPase fold.
+ The ASCE division also includes ABC; Region: AAA; cd00009"
+ /db_xref="CDD:99707"
+ misc_feature 4249764..4249787
+ /gene="hflB"
+ /locus_tag="SARI_04329"
+ /note="Walker A motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature order(4249767..4249790,4249941..4249943,4250082..4250084)
+ /gene="hflB"
+ /locus_tag="SARI_04329"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:99707"
+ misc_feature 4249929..4249946
+ /gene="hflB"
+ /locus_tag="SARI_04329"
+ /note="Walker B motif; other site"
+ /db_xref="CDD:99707"
+ misc_feature 4250124..4250126
+ /gene="hflB"
+ /locus_tag="SARI_04329"
+ /note="arginine finger; other site"
+ /db_xref="CDD:99707"
+ misc_feature 4250331..4250966
+ /gene="hflB"
+ /locus_tag="SARI_04329"
+ /note="Peptidase family M41; Region: Peptidase_M41;
+ pfam01434"
+ /db_xref="CDD:216502"
+ unsure 4250480..4251159
+ /note="Sequence derived from one plasmid subclone"
+ gene 4251229..4252077
+ /gene="folP"
+ /locus_tag="SARI_04330"
+ CDS 4251229..4252077
+ /gene="folP"
+ /locus_tag="SARI_04330"
+ /inference="protein motif:Gene3D:IPR000489"
+ /inference="protein motif:HMMPfam:IPR000489"
+ /inference="protein motif:HMMTigr:IPR006390"
+ /inference="protein motif:ScanRegExp:IPR000489"
+ /inference="protein motif:superfamily:IPR011005"
+ /inference="similar to AA sequence:INSD:AAV78987.1"
+ /note="'catalyzes the formation of dihydropteroate from
+ 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine
+ diphosphate and 4-aminobenzoate'"
+ /codon_start=1
+ /transl_table=11
+ /product="dihydropteroate synthase"
+ /protein_id="YP_001573254.1"
+ /db_xref="GI:161506142"
+ /db_xref="InterPro:IPR000489"
+ /db_xref="InterPro:IPR006390"
+ /db_xref="InterPro:IPR011005"
+ /translation="MKLFAQGATLDLTHPHVMGILNVTPDSFSDGGAHNTLIEAVKHA
+ NLMVNAGATIIDVGGESTRPGAAEVSVEEELDRVIPVLEAIAQRFEVWISVDTSKPEV
+ IREAAKAGAHIINDVRSLSEPGALEAAAETGLPVSLMHMQGNPKTMQDAPKYDDVFAE
+ VNRYFIEQIARCEKAGIAKAKLLLDPGFGFGKNLSHNYTLLARLGEFHHFNLPLLVGM
+ SRKTMIGQLLNVGPSDRLNGSLACAVIAAMQGAQIIRVHDVKETVEAMRVVEATLSAK
+ GNKRYE"
+ misc_feature 4251271..4252038
+ /gene="folP"
+ /locus_tag="SARI_04330"
+ /note="DHPS subgroup of Pterin binding enzymes. DHPS
+ (dihydropteroate synthase), a functional homodimer,
+ catalyzes the condensation of p-aminobenzoic acid (pABA)
+ in the de novo biosynthesis of folate, which is an
+ essential cofactor in both nucleic acid and...; Region:
+ DHPS; cd00739"
+ /db_xref="CDD:238380"
+ misc_feature 4251277..4252041
+ /gene="folP"
+ /locus_tag="SARI_04330"
+ /note="dihydropteroate synthase; Region: DHPS; TIGR01496"
+ /db_xref="CDD:233439"
+ misc_feature order(4251292..4251294,4251514..4251516,4251571..4251573,
+ 4251577..4251579,4251643..4251645,4251781..4251783,
+ 4251877..4251879,4251889..4251891,4251991..4251993,
+ 4251997..4251999)
+ /gene="folP"
+ /locus_tag="SARI_04330"
+ /note="substrate binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:238380"
+ misc_feature order(4251820..4251822,4251832..4251837,4251949..4251951,
+ 4251961..4251963,4251973..4251975,4252018..4252023)
+ /gene="folP"
+ /locus_tag="SARI_04330"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238380"
+ misc_feature 4251883..4251891
+ /gene="folP"
+ /locus_tag="SARI_04330"
+ /note="inhibitor binding site; inhibition site"
+ /db_xref="CDD:238380"
+ unsure 4251841..4252211
+ /note="Sequence derived from one plasmid subclone"
+ gene 4252070..4253407
+ /gene="glmM"
+ /locus_tag="SARI_04331"
+ CDS 4252070..4253407
+ /gene="glmM"
+ /locus_tag="SARI_04331"
+ /inference="protein motif:HMMPfam:IPR005843"
+ /inference="protein motif:HMMPfam:IPR005844"
+ /inference="protein motif:HMMPfam:IPR005845"
+ /inference="protein motif:HMMPfam:IPR005846"
+ /inference="protein motif:HMMTigr:IPR006352"
+ /inference="protein motif:ScanRegExp:IPR005841"
+ /inference="protein motif:superfamily:IPR009015"
+ /inference="similar to AA sequence:INSD:CAD07811.1"
+ /note="catalyzes the conversion of glucosamine-6-phosphate
+ to glucosamine-1-phosphate"
+ /codon_start=1
+ /transl_table=11
+ /product="phosphoglucosamine mutase"
+ /protein_id="YP_001573255.1"
+ /db_xref="GI:161506143"
+ /db_xref="InterPro:IPR005841"
+ /db_xref="InterPro:IPR005843"
+ /db_xref="InterPro:IPR005844"
+ /db_xref="InterPro:IPR005845"
+ /db_xref="InterPro:IPR005846"
+ /db_xref="InterPro:IPR006352"
+ /db_xref="InterPro:IPR009015"
+ /translation="MSNRKYFGTDGIRGRVGDAPITPDFVLKLGWAAGKVLARHGSRK
+ IIIGKDTRISGYMLESALEAGLAAAGLSASFTGPMPTPAVAYLTRTFRAEAGIVISAS
+ HNPFYDNGIKFFSIDGTKLPDDVEEAIEAEMEKEITCVDSAELGKASRIVDAAGRYIE
+ FCKGTFPNELSLNGLKVVVDCANGATYHIAPNVLRELGASVIAIGCEPNGVNINEEVG
+ ATDVRALQARVLAEKADLGIALDGDGDRVIMVDHEGAKVDGDQIMYIIAREGLRQGQL
+ RGGAVGTLMSNMGLELALKQLGIPFARAKVGDRYVLEKLQEKGWRIGAENSGHVILLD
+ KTTTGDGIVAGLQVLAAMVRNHMSLHDLCSGMKMFPQILVNVRYTAGSGDPLENEAVK
+ AVTADVEATLGNRGRVLLRKSGTEPLIRVMVEGEDEAQVRAFAHRIADAVKAV"
+ misc_feature 4252079..4253404
+ /gene="glmM"
+ /locus_tag="SARI_04331"
+ /note="phosphoglucosamine mutase; Provisional; Region:
+ glmM; PRK10887"
+ /db_xref="CDD:236787"
+ misc_feature 4252085..4253386
+ /gene="glmM"
+ /locus_tag="SARI_04331"
+ /note="GlmM is a bacterial phosphoglucosamine mutase
+ (PNGM) that belongs to the alpha-D-phosphohexomutase
+ superfamily. It is required for the interconversion of
+ glucosamine-6-phosphate and glucosamine-1-phosphate in the
+ biosynthetic pathway of...; Region: GlmM; cd05802"
+ /db_xref="CDD:100095"
+ misc_feature order(4252091..4252093,4252097..4252099,4252106..4252108,
+ 4252373..4252381,4252403..4252405,4252790..4252792,
+ 4252796..4252798,4252802..4252807,4252922..4252924,
+ 4252985..4252993,4253042..4253044,4253048..4253050,
+ 4253054..4253056,4253300..4253302,4253306..4253314,
+ 4253327..4253329)
+ /gene="glmM"
+ /locus_tag="SARI_04331"
+ /note="active site"
+ /db_xref="CDD:100095"
+ misc_feature order(4252097..4252099,4252373..4252375,4252805..4252807,
+ 4252922..4252924,4252985..4252987,4252991..4252993,
+ 4253042..4253044,4253048..4253050,4253054..4253056,
+ 4253300..4253302,4253306..4253314,4253327..4253329)
+ /gene="glmM"
+ /locus_tag="SARI_04331"
+ /note="substrate binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:100095"
+ misc_feature order(4252373..4252375,4252790..4252792,4252796..4252798,
+ 4252802..4252804)
+ /gene="glmM"
+ /locus_tag="SARI_04331"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:100095"
+ gene 4253629..4253961
+ /gene="secG"
+ /locus_tag="SARI_04332"
+ CDS 4253629..4253961
+ /gene="secG"
+ /locus_tag="SARI_04332"
+ /inference="protein motif:HMMPfam:IPR004692"
+ /inference="protein motif:HMMTigr:IPR004692"
+ /inference="similar to AA sequence:INSD:AAV78985.1"
+ /note="'KEGG: lpn:lpg1509 0.0036 D-alanyl-D-alanine
+ carboxypeptidase K07258;
+ COG: COG1314 Preprotein translocase subunit SecG;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="preprotein translocase subunit SecG"
+ /protein_id="YP_001573256.1"
+ /db_xref="GI:161506144"
+ /db_xref="InterPro:IPR004692"
+ /translation="MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFG
+ SSGSGNFMTRMTAVLATLFFIISLVLGNINSNKTNKGSEWENLSAPTKTEQTQPAAPA
+ QPTSDIPH"
+ misc_feature 4253632..4253853
+ /gene="secG"
+ /locus_tag="SARI_04332"
+ /note="Preprotein translocase SecG subunit; Region: SecG;
+ pfam03840"
+ /db_xref="CDD:217757"
+ unsure 4253943..4254645
+ /note="Sequence derived from one plasmid subclone"
+ gene 4253982..4254065
+ /locus_tag="SARI_04333"
+ tRNA 4253982..4254065
+ /locus_tag="SARI_04333"
+ /product="tRNA-Leu"
+ gene complement(4254255..4255604)
+ /locus_tag="SARI_04334"
+ CDS complement(4254255..4255604)
+ /locus_tag="SARI_04334"
+ /inference="protein motif:HMMPanther:IPR001518"
+ /inference="protein motif:HMMPfam:IPR001518"
+ /inference="protein motif:HMMTigr:IPR001518"
+ /inference="protein motif:ScanRegExp:IPR001518"
+ /inference="similar to AA sequence:REFSEQ:NP_457671.1"
+ /note="catalyzes the formation of arginosuccinate from
+ citrulline and aspartate in arginine biosynthesis"
+ /codon_start=1
+ /transl_table=11
+ /product="argininosuccinate synthase"
+ /protein_id="YP_001573257.1"
+ /db_xref="GI:161506145"
+ /db_xref="InterPro:IPR001518"
+ /translation="MTTILKHLPAGQRIGIAFSGGLDTSAALLWMRQKGAVPYAYTAN
+ LGQPDEDDYEAIPRRAMEYGAENARLIDCRKQLVTEGIAAIQCGAFHNTTGGLTYFNT
+ TPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNAELQIYKPWLDT
+ DFINELGGRHEMSEFMIACGFDYKMSVEKAYSTDSNILGATHEAKDLEFLNSSVKIVN
+ PIMGVKFWDEEVKIPAEEVSVRFEQGHPVALNGKTLSNDVEMMLEANRIGGRHGLGMS
+ DQIENRIIEAKSRGIYEAPGMALLHIAYERLLTGIHNEDTIEQYHAHGRQLGRLLYQG
+ RWFDSQALMLRDSLQRWVASQVTGEVTLELRRGNDYSILNTVSDNLTYKPERLTMEKG
+ DSVFSPDDRIGQLTMRNLDITDTREKLYGYAQSGLLVTSSATGLPQVGSLEKSKVAE"
+ misc_feature complement(4254267..4255604)
+ /locus_tag="SARI_04334"
+ /note="argininosuccinate synthase; Validated; Region:
+ PRK05370"
+ /db_xref="CDD:235434"
+ unsure 4255518..4255538
+ /note="Sequence derived from one plasmid subclone"
+ gene 4255951..4256024
+ /locus_tag="SARI_04335"
+ tRNA 4255951..4256024
+ /locus_tag="SARI_04335"
+ /product="tRNA-Met"
+ gene 4256235..4256687
+ /locus_tag="SARI_04336"
+ CDS 4256235..4256687
+ /locus_tag="SARI_04336"
+ /inference="protein motif:HMMPfam:IPR003728"
+ /inference="similar to AA sequence:REFSEQ:NP_457670.1"
+ /note="in Streptococcus pneumoniae this gene was found to
+ be essential; structure determination of the Streptococcus
+ protein shows that it is similar to a number of other
+ proteins"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573258.2"
+ /db_xref="GI:228879515"
+ /db_xref="InterPro:IPR003728"
+ /translation="MSTLEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSED
+ GINVDDCADVSHQVSAVLDVEDPISVAYNLEVSSPGLDRPMFTADHYARFQGEEVALV
+ LRMAVQNRRKWQGIIKAVDGEMITVTVEGKDEVFALSNIQKANLVPHF"
+ misc_feature 4256235..4256684
+ /locus_tag="SARI_04336"
+ /note="ribosome maturation protein RimP; Reviewed; Region:
+ PRK00092"
+ /db_xref="CDD:234627"
+ misc_feature 4256256..>4256600
+ /locus_tag="SARI_04336"
+ /note="Sm and related proteins; Region: Sm_like; cl00259"
+ /db_xref="CDD:241733"
+ misc_feature 4256472..4256684
+ /locus_tag="SARI_04336"
+ /note="Bacillus subtilis YxlS-like, C-terminal domain;
+ Region: YlxS_C; cd01734"
+ /db_xref="CDD:212481"
+ misc_feature order(4256538..4256540,4256544..4256546,4256565..4256567,
+ 4256571..4256573,4256589..4256591,4256610..4256612,
+ 4256634..4256639,4256643..4256648,4256652..4256669)
+ /locus_tag="SARI_04336"
+ /note="putative oligomer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:212481"
+ misc_feature order(4256595..4256597,4256601..4256603,4256643..4256645)
+ /locus_tag="SARI_04336"
+ /note="putative RNA binding site [nucleotide binding];
+ other site"
+ /db_xref="CDD:212481"
+ gene 4256715..4258217
+ /gene="nusA"
+ /locus_tag="SARI_04337"
+ CDS 4256715..4258217
+ /gene="nusA"
+ /locus_tag="SARI_04337"
+ /inference="protein motif:Gene3D:IPR009019"
+ /inference="protein motif:Gene3D:IPR012340"
+ /inference="protein motif:HMMPfam:IPR003029"
+ /inference="protein motif:HMMPfam:IPR013735"
+ /inference="protein motif:HMMSmart:IPR003029"
+ /inference="protein motif:HMMTigr:IPR010213"
+ /inference="protein motif:HMMTigr:IPR010214"
+ /inference="protein motif:superfamily:IPR008994"
+ /inference="protein motif:superfamily:IPR009019"
+ /inference="protein motif:superfamily:IPR010995"
+ /inference="similar to AA sequence:REFSEQ:NP_462200.1"
+ /note="'modifies transcription through interactions with
+ RNA polymerase affecting elongation, readthrough,
+ termination, and antitermination'"
+ /codon_start=1
+ /transl_table=11
+ /product="transcription elongation factor NusA"
+ /protein_id="YP_001573259.1"
+ /db_xref="GI:161506147"
+ /db_xref="InterPro:IPR003029"
+ /db_xref="InterPro:IPR008994"
+ /db_xref="InterPro:IPR009019"
+ /db_xref="InterPro:IPR010213"
+ /db_xref="InterPro:IPR010214"
+ /db_xref="InterPro:IPR010995"
+ /db_xref="InterPro:IPR012340"
+ /db_xref="InterPro:IPR013735"
+ /translation="MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEID
+ VRVEIDRKSGDFDTFRRWLIVEEVTMPTKEITLEAARFEDESLNVGDYVEDQIESVTF
+ DRITTQTAKQVIVQKVREAERAMVVDQFRDQEGEIVTGVVKKVNRDNISLEIKSEGMA
+ GNAEAVILREDMLPRENFRPGDRIRGVLYAVRPEARGAQLFVTRSRPEMLIELFRIEV
+ PEIGEEVIEIKAAARDPGSRAKIAVKTNDKRIDPVGACVGMRGARVQAVSTELGGERI
+ DIVLWDDNPAQFVINAMAPADVASIVVDEDKHTMDIAVEAGNLAQAIGRNGQNVRLAS
+ QLSGWELNVMTVDDLQAKHQAETHAAIEIFTKHLDIDEEFATVLVEEGFSTLEELAYV
+ PMKELLEIDGLDEPTVEALRERAKNALATLAQAQEESLGDNKPADDLLNLEGLDRDMA
+ FKLAARGVCTLEDLADQGIDDLADIEGLTDEKAGELIMAARNICWFGDEA"
+ misc_feature 4256715..4258157
+ /gene="nusA"
+ /locus_tag="SARI_04337"
+ /note="transcription elongation factor NusA; Validated;
+ Region: nusA; PRK09202"
+ /db_xref="CDD:236410"
+ misc_feature 4256724..4257089
+ /gene="nusA"
+ /locus_tag="SARI_04337"
+ /note="NusA N-terminal domain; Region: NusA_N; pfam08529"
+ /db_xref="CDD:219884"
+ misc_feature 4257108..4257326
+ /gene="nusA"
+ /locus_tag="SARI_04337"
+ /note="S1_NusA: N-utilizing substance A protein (NusA),
+ S1-like RNA-binding domain. S1-like RNA-binding domains
+ are found in a wide variety of RNA-associated proteins.
+ NusA is a transcription elongation factor containing an
+ N-terminal catalytic domain and three...; Region: S1_NusA;
+ cd04455"
+ /db_xref="CDD:239902"
+ misc_feature order(4257141..4257143,4257165..4257167,4257210..4257212,
+ 4257216..4257218)
+ /gene="nusA"
+ /locus_tag="SARI_04337"
+ /note="RNA binding site [nucleotide binding]; other site"
+ /db_xref="CDD:239902"
+ misc_feature order(4257147..4257149,4257159..4257161,4257204..4257206,
+ 4257210..4257212,4257309..4257311)
+ /gene="nusA"
+ /locus_tag="SARI_04337"
+ /note="homodimer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:239902"
+ misc_feature 4257417..4257617
+ /gene="nusA"
+ /locus_tag="SARI_04337"
+ /note="NusA-like KH domain; Region: KH_5; pfam13184"
+ /db_xref="CDD:205365"
+ misc_feature 4257567..4257746
+ /gene="nusA"
+ /locus_tag="SARI_04337"
+ /note="NusA_K homology RNA-binding domain (KH). NusA is an
+ essential multifunctional transcription elongation factor
+ that is universally conserved among prokaryotes and
+ archaea. NusA anti-termination function plays an important
+ role in the expression of...; Region: NusA_KH; cd02134"
+ /db_xref="CDD:239049"
+ misc_feature 4257684..4257695
+ /gene="nusA"
+ /locus_tag="SARI_04337"
+ /note="G-X-X-G motif; other site"
+ /db_xref="CDD:239049"
+ misc_feature 4257822..4257971
+ /gene="nusA"
+ /locus_tag="SARI_04337"
+ /note="transcription termination factor NusA, C-terminal
+ duplication; Region: nusA_Cterm_rpt; TIGR01954"
+ /db_xref="CDD:131009"
+ misc_feature 4258047..4258196
+ /gene="nusA"
+ /locus_tag="SARI_04337"
+ /note="transcription termination factor NusA, C-terminal
+ duplication; Region: nusA_Cterm_rpt; TIGR01954"
+ /db_xref="CDD:131009"
+ unsure 4257991..4257992
+ /gene="nusA"
+ /locus_tag="SARI_04337"
+ /note="Sequence derived from one plasmid subclone"
+ gene 4258242..4260923
+ /gene="infB"
+ /locus_tag="SARI_04338"
+ CDS 4258242..4260923
+ /gene="infB"
+ /locus_tag="SARI_04338"
+ /inference="protein motif:BlastProDom:IPR000178"
+ /inference="protein motif:HMMPfam:IPR000795"
+ /inference="protein motif:HMMPfam:IPR004161"
+ /inference="protein motif:HMMPfam:IPR006847"
+ /inference="protein motif:HMMPfam:IPR013575"
+ /inference="protein motif:HMMTigr:IPR000178"
+ /inference="protein motif:HMMTigr:IPR005225"
+ /inference="protein motif:ScanRegExp:IPR000178"
+ /inference="protein motif:superfamily:IPR009000"
+ /inference="protein motif:superfamily:IPR009061"
+ /note="Protects formylmethionyl-tRNA from spontaneous
+ hydrolysis and promotes its binding to the 30S ribosomal
+ subunits during initiation of protein synthesis. Also
+ involved in the hydrolysis of GTP during the formation of
+ the 70S ribosomal complex"
+ /codon_start=1
+ /transl_table=11
+ /product="translation initiation factor IF-2"
+ /protein_id="YP_001573260.1"
+ /db_xref="GI:161506148"
+ /db_xref="InterPro:IPR000178"
+ /db_xref="InterPro:IPR000795"
+ /db_xref="InterPro:IPR004161"
+ /db_xref="InterPro:IPR005225"
+ /db_xref="InterPro:IPR006847"
+ /db_xref="InterPro:IPR009000"
+ /db_xref="InterPro:IPR009061"
+ /db_xref="InterPro:IPR013575"
+ /translation="MTDVTVKALAAERQVSVDRLVQQFADAGIRKSADDSVSAQEKQT
+ LLAHLNREAGSGPDKLTLQRKTRSTLNIPGTGGKSKSVQIEVRKKRTFVKRDPQEAER
+ LAAEEQAQREAEEQARREAEEQAKREAQQKAEREAAEQAKREAAEKAKREAAEKDKVS
+ NQQTDDMTKTAQAEKARRENEAAELKRKAEEEARRKLEEEARRVAEEARRMAEENKWT
+ ATPEPVEDTSDYHVTTSQHARQAEDESDREVEGGRGRGRNAKAARPAKKGNKHAESKA
+ DREEARAAVRGGKGGKRKGSSLQQGFQKPVQAVNRDVVIGETITVGELANKMAVKGSQ
+ VIKAMMKLGAMATINQVIDQETAQLVAEEMGHKVILRRENELEEAVMSDRDTGAAAEP
+ RAPVVTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETDNGMITFLDTPG
+ HAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAGVPVVVAVNKIDKPEA
+ DPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDAILLQAEVLELKAVRKG
+ MASGAVIESFLDKGRGPVATVLVREGTLHKGDIVLCGFEYGRVRAMRNELGQEVLEAG
+ PSIPVEILGLSGVPAAGDEVTVVRDEKKAREVALYRQGKFREVKLARQQKSKLENMFA
+ NMTEGEVHEVNIVLKADVQGSVEAISDSLLKLSTDEVKVKIIGSGVGGITETDATLAA
+ ASNAILVGFNVRADASARKVIESESLDLRYYSVIYNLIDEVKAAMSGMLSPELKQQII
+ GLAEVRDVFKSPKFGAIAGCMVTEGVVKRHNPIRVLRDNVVIYEGELESLRRFKDDVN
+ EVRNGMECGIGVKNYNDVRAGDMIEVFEIIEIQRTIA"
+ misc_feature 4258242..4258397
+ /gene="infB"
+ /locus_tag="SARI_04338"
+ /note="Translation initiation factor IF-2, N-terminal
+ region; Region: IF2_N; pfam04760"
+ /db_xref="CDD:218250"
+ misc_feature 4258407..4258529
+ /gene="infB"
+ /locus_tag="SARI_04338"
+ /note="Bacterial translation initiation factor IF-2
+ associated region; Region: IF2_assoc; pfam08364"
+ /db_xref="CDD:219808"
+ misc_feature 4259163..4260920
+ /gene="infB"
+ /locus_tag="SARI_04338"
+ /note="translation initiation factor IF-2; Region: IF-2;
+ TIGR00487"
+ /db_xref="CDD:232995"
+ misc_feature 4259190..4259342
+ /gene="infB"
+ /locus_tag="SARI_04338"
+ /note="Translation initiation factor IF-2, N-terminal
+ region; Region: IF2_N; pfam04760"
+ /db_xref="CDD:218250"
+ misc_feature 4259424..4259915
+ /gene="infB"
+ /locus_tag="SARI_04338"
+ /note="Initiation Factor 2 (IF2)/ eukaryotic Initiation
+ Factor 5B (eIF5B) family; Region: IF2_eIF5B; cd01887"
+ /db_xref="CDD:206674"
+ misc_feature 4259442..4259465
+ /gene="infB"
+ /locus_tag="SARI_04338"
+ /note="G1 box; other site"
+ /db_xref="CDD:206674"
+ misc_feature order(4259445..4259447,4259451..4259453,4259463..4259468,
+ 4259475..4259477,4259484..4259489,4259535..4259540,
+ 4259592..4259597,4259664..4259669,4259772..4259774,
+ 4259784..4259786)
+ /gene="infB"
+ /locus_tag="SARI_04338"
+ /note="putative GEF interaction site [polypeptide
+ binding]; other site"
+ /db_xref="CDD:206674"
+ misc_feature order(4259448..4259468,4259595..4259597,4259742..4259747,
+ 4259751..4259756,4259850..4259858)
+ /gene="infB"
+ /locus_tag="SARI_04338"
+ /note="GTP/Mg2+ binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:206674"
+ misc_feature 4259517..4259537
+ /gene="infB"
+ /locus_tag="SARI_04338"
+ /note="Switch I region; other site"
+ /db_xref="CDD:206674"
+ misc_feature 4259523..4259525
+ /gene="infB"
+ /locus_tag="SARI_04338"
+ /note="G2 box; other site"
+ /db_xref="CDD:206674"
+ misc_feature 4259580..4259591
+ /gene="infB"
+ /locus_tag="SARI_04338"
+ /note="G3 box; other site"
+ /db_xref="CDD:206674"
+ misc_feature 4259586..4259642
+ /gene="infB"
+ /locus_tag="SARI_04338"
+ /note="Switch II region; other site"
+ /db_xref="CDD:206674"
+ misc_feature 4259742..4259753
+ /gene="infB"
+ /locus_tag="SARI_04338"
+ /note="G4 box; other site"
+ /db_xref="CDD:206674"
+ misc_feature 4259850..4259858
+ /gene="infB"
+ /locus_tag="SARI_04338"
+ /note="G5 box; other site"
+ /db_xref="CDD:206674"
+ misc_feature 4259943..4260224
+ /gene="infB"
+ /locus_tag="SARI_04338"
+ /note="This family represents the domain II of bacterial
+ Initiation Factor 2 (IF2) and its eukaryotic mitochondrial
+ homologue mtIF2. IF2, the largest initiation factor is an
+ essential GTP binding protein. In E. coli three natural
+ forms of IF2 exist in the cell; Region: IF2_mtIF2_II;
+ cd03702"
+ /db_xref="CDD:239673"
+ misc_feature 4260267..4260590
+ /gene="infB"
+ /locus_tag="SARI_04338"
+ /note="Translation-initiation factor 2; Region: IF-2;
+ pfam11987"
+ /db_xref="CDD:221359"
+ misc_feature 4260636..4260887
+ /gene="infB"
+ /locus_tag="SARI_04338"
+ /note="mtIF2_IVc: this family represents the C2 subdomain
+ of domain IV of mitochondrial translation initiation
+ factor 2 (mtIF2) which adopts a beta-barrel fold
+ displaying a high degree of structural similarity with
+ domain II of the translation elongation factor...; Region:
+ mtIF2_IVc; cd03692"
+ /db_xref="CDD:239663"
+ gene 4261044..4261481
+ /gene="rbfA"
+ /locus_tag="SARI_04339"
+ CDS 4261044..4261481
+ /gene="rbfA"
+ /locus_tag="SARI_04339"
+ /inference="protein motif:BlastProDom:IPR000238"
+ /inference="protein motif:HMMPfam:IPR000238"
+ /inference="protein motif:HMMTigr:IPR000238"
+ /inference="protein motif:ScanRegExp:IPR000238"
+ /inference="similar to AA sequence:REFSEQ:YP_542574.1"
+ /note="associates with free 30S ribosomal subunits;
+ essential for efficient processing of 16S rRNA; in
+ Escherichia coli rbfA is induced by cold shock"
+ /codon_start=1
+ /transl_table=11
+ /product="ribosome-binding factor A"
+ /protein_id="YP_001573261.1"
+ /db_xref="GI:161506149"
+ /db_xref="InterPro:IPR000238"
+ /translation="MPLFCLYSGELIMAKEFGRPQRVAQEMQKEIAIILQREIKDPRL
+ GMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLR
+ IVPELTFFYDNSLVEGMRMSNLVTNVVKHDEERRVNPDDSKED"
+ misc_feature 4261080..4261448
+ /gene="rbfA"
+ /locus_tag="SARI_04339"
+ /note="ribosome-binding factor A; Validated; Region: rbfA;
+ PRK00521"
+ /db_xref="CDD:234787"
+ gene 4261481..4262425
+ /gene="truB"
+ /locus_tag="SARI_04340"
+ CDS 4261481..4262425
+ /gene="truB"
+ /locus_tag="SARI_04340"
+ /inference="protein motif:HMMPfam:IPR002501"
+ /inference="protein motif:HMMPIR:IPR004510"
+ /inference="protein motif:HMMTigr:IPR004510"
+ /inference="similar to AA sequence:SwissProt:Q8ZLT2"
+ /note="catalyzes isomerization of specific uridines in RNA
+ to pseudouridine; responsible for residues in T loops of
+ many tRNAs"
+ /codon_start=1
+ /transl_table=11
+ /product="tRNA pseudouridine synthase B"
+ /protein_id="YP_001573262.1"
+ /db_xref="GI:161506150"
+ /db_xref="InterPro:IPR002501"
+ /db_xref="InterPro:IPR004510"
+ /translation="MSRPRRRGRDIHGVLLLDKPQGMSSNDVLQKVKRIYNANRAGHT
+ GALDPLATGMLPICLGEATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVQERPVT
+ FSAGQLASALETFRGDIEQIPSMYSALKYQGKKLYEYARLGIEVPREARPITVYELLF
+ IRHEGNELELEVHCSKGTYIRTIIDDLGEKLGCGAHVIYLRRLTVSKYPVERMVTLEH
+ LQALAAQAEQQGVPAAQLLDPLLMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTSGAP
+ LNGLVRVTEGEDGKFIGMGEIDDEGRVAPRRLVVEHPA"
+ misc_feature 4261487..4262422
+ /gene="truB"
+ /locus_tag="SARI_04340"
+ /note="tRNA pseudouridine synthase B; Provisional; Region:
+ truB; PRK05033"
+ /db_xref="CDD:235333"
+ misc_feature 4261517..4262125
+ /gene="truB"
+ /locus_tag="SARI_04340"
+ /note="Pseudouridine synthase, Escherichia coli TruB like;
+ Region: PseudoU_synth_EcTruB; cd02573"
+ /db_xref="CDD:211339"
+ misc_feature order(4261550..4261552,4261556..4261558,4261565..4261567,
+ 4261601..4261609,4261613..4261627,4261667..4261669,
+ 4261676..4261681,4261688..4261690,4261700..4261702,
+ 4261706..4261708,4261856..4261870,4261931..4261933,
+ 4262006..4262023,4262084..4262086)
+ /gene="truB"
+ /locus_tag="SARI_04340"
+ /note="RNA binding site [nucleotide binding]; other site"
+ /db_xref="CDD:211339"
+ misc_feature order(4261613..4261624,4262021..4262023)
+ /gene="truB"
+ /locus_tag="SARI_04340"
+ /note="active site"
+ /db_xref="CDD:211339"
+ misc_feature 4262234..4262407
+ /gene="truB"
+ /locus_tag="SARI_04340"
+ /note="Pseudouridine synthase II TruB, C-terminal; Region:
+ TruB-C_2; pfam09157"
+ /db_xref="CDD:220128"
+ misc_feature 4262517..4262631
+ /inference="nucleotide motif:Rfam:RF00114"
+ /note="ribosomal s15 leader"
+ gene 4262575..4262844
+ /locus_tag="SARI_04340a"
+ CDS 4262575..4262844
+ /locus_tag="SARI_04340a"
+ /codon_start=1
+ /transl_table=11
+ /product="ribosomal protein S15"
+ /protein_id="YP_004767288.1"
+ /db_xref="GI:341904766"
+ /translation="MSLSTEATAKIVSEFGRDANDTGSTDVQVALLTAQINHLQGHFA
+ EHKKDHHSRRGLLRMVSQRRKLLDYLKRKDVARYTALIERLGLRR"
+ misc_feature 4262596..4262832
+ /locus_tag="SARI_04340a"
+ /note="Ribosomal protein S15 (prokaryotic)_S13
+ (eukaryotic) binds the central domain of 16S rRNA and is
+ required for assembly of the small ribosomal subunit and
+ for intersubunit association, thus representing a key
+ element in the assembly of the whole ribosome; Region:
+ Ribosomal_S15p_S13e; cd00353"
+ /db_xref="CDD:238213"
+ misc_feature order(4262596..4262598,4262647..4262649,4262656..4262658,
+ 4262677..4262679,4262689..4262691,4262698..4262700,
+ 4262710..4262712,4262716..4262721,4262725..4262730,
+ 4262767..4262769,4262779..4262781)
+ /locus_tag="SARI_04340a"
+ /note="16S/18S rRNA binding site [nucleotide binding];
+ other site"
+ /db_xref="CDD:238213"
+ misc_feature order(4262662..4262664,4262671..4262676,4262683..4262685,
+ 4262692..4262694,4262812..4262814,4262824..4262826)
+ /locus_tag="SARI_04340a"
+ /note="S13e-L30e interaction site [polypeptide binding];
+ other site"
+ /db_xref="CDD:238213"
+ misc_feature order(4262752..4262754,4262764..4262766,4262827..4262832)
+ /locus_tag="SARI_04340a"
+ /note="25S rRNA binding site [nucleotide binding]; other
+ site"
+ /db_xref="CDD:238213"
+ gene complement(4262862..4263031)
+ /locus_tag="SARI_04341"
+ misc_RNA complement(4262862..4263031)
+ /locus_tag="SARI_04341"
+ /product="SraG RNA"
+ /inference="nucleotide motif:Rfam:RF00082"
+ /note="Rfam score 146.15"
+ gene 4263058..4265223
+ /locus_tag="SARI_04342"
+ CDS 4263058..4265223
+ /locus_tag="SARI_04342"
+ /inference="protein motif:Gene3D:IPR012340"
+ /inference="protein motif:HMMPfam:IPR001247"
+ /inference="protein motif:HMMPfam:IPR003029"
+ /inference="protein motif:HMMPfam:IPR004088"
+ /inference="protein motif:HMMPIR:IPR012162"
+ /inference="protein motif:HMMSmart:IPR003029"
+ /inference="protein motif:HMMSmart:IPR004087"
+ /inference="protein motif:superfamily:IPR001247"
+ /inference="protein motif:superfamily:IPR008994"
+ /note="'KEGG: sec:SC3223 0. pnp; polynucleotide
+ phosphorylase, member of mRNA degradosome K00962;
+ COG: COG1185 Polyribonucleotide nucleotidyltransferase
+ (polynucleotide phosphorylase);
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="polynucleotide phosphorylase/polyadenylase"
+ /protein_id="YP_001573263.1"
+ /db_xref="GI:161506151"
+ /db_xref="InterPro:IPR001247"
+ /db_xref="InterPro:IPR003029"
+ /db_xref="InterPro:IPR004087"
+ /db_xref="InterPro:IPR004088"
+ /db_xref="InterPro:IPR008994"
+ /db_xref="InterPro:IPR012162"
+ /db_xref="InterPro:IPR012340"
+ /translation="MPSKIGKDIILLNPIVRKFQYGQHTVTLETGMMARQATAAVMVS
+ MDDTAVFVTVVGQKKAKPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLIA
+ RLIDRPVRPLFPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGPIG
+ AARVGYINDQYVLNPTQDELKESKLDLVVAGTEAAVLMVESEAELLSEDTMLGAVVFG
+ HEQQQVVIQAINDLVKEAGKPRWDWQPEAVNDALNARVAALAESRLSDAYRITDKQER
+ YAQVDVIKSETIDQLTAEDDTLDANELGEILHAIEKNVVRSRVLAGEPRIDGREKDMI
+ RGLDVRTGVLPRTHGSALFTRGETQALVTATLGTARDAQVLDELMGERTDSFLFHYNF
+ PPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDKFPYTVRVVSEITESNGSSSM
+ ASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSDILGDEDHLGDMDFKVAGS
+ REGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQAINAPRGDISEFAPRIH
+ TIKISTDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAATDGEKAKYAIRRIEE
+ ITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEV
+ PVKVLEVDRQGRVRLSIKEATEQTQPAAAPEAPTSEQGE"
+ misc_feature 4263094..4265157
+ /locus_tag="SARI_04342"
+ /note="polynucleotide phosphorylase/polyadenylase;
+ Provisional; Region: PRK11824"
+ /db_xref="CDD:236995"
+ misc_feature 4263100..4263786
+ /locus_tag="SARI_04342"
+ /note="Polyribonucleotide nucleotidyltransferase, repeat
+ 1; Region: RNase_PH_PNPase_1; cd11363"
+ /db_xref="CDD:206768"
+ misc_feature order(4263103..4263105,4263109..4263111,4263136..4263138,
+ 4263142..4263144,4263151..4263153,4263181..4263183,
+ 4263187..4263189,4263193..4263195,4263202..4263204)
+ /locus_tag="SARI_04342"
+ /note="RNase E interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:206768"
+ misc_feature order(4263151..4263168,4263181..4263183,4263208..4263210,
+ 4263214..4263216,4263220..4263222,4263226..4263228,
+ 4263271..4263273,4263277..4263279,4263283..4263294,
+ 4263298..4263309,4263316..4263330,4263340..4263342,
+ 4263415..4263417,4263421..4263423,4263427..4263429,
+ 4263439..4263453)
+ /locus_tag="SARI_04342"
+ /note="trimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:206768"
+ misc_feature 4263808..4264047
+ /locus_tag="SARI_04342"
+ /note="Polyribonucleotide nucleotidyltransferase, RNA
+ binding domain; Region: PNPase; pfam03726"
+ /db_xref="CDD:217697"
+ misc_feature 4264057..4264719
+ /locus_tag="SARI_04342"
+ /note="Polyribonucleotide nucleotidyltransferase, repeat
+ 2; Region: RNase_PH_PNPase_2; cd11364"
+ /db_xref="CDD:206769"
+ misc_feature order(4264057..4264083,4264090..4264092,4264669..4264671,
+ 4264681..4264683,4264693..4264695,4264705..4264710)
+ /locus_tag="SARI_04342"
+ /note="RNase E interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:206769"
+ misc_feature order(4264069..4264071,4264075..4264077,4264087..4264101,
+ 4264123..4264128,4264138..4264140,4264144..4264146,
+ 4264150..4264158,4264168..4264176,4264222..4264224,
+ 4264228..4264230,4264237..4264248,4264252..4264260,
+ 4264267..4264269,4264273..4264275,4264363..4264365,
+ 4264369..4264371,4264375..4264377,4264381..4264389)
+ /locus_tag="SARI_04342"
+ /note="trimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:206769"
+ misc_feature order(4264225..4264227,4264231..4264233,4264282..4264284,
+ 4264294..4264296,4264396..4264404,4264543..4264545,
+ 4264561..4264563,4264567..4264569,4264603..4264605,
+ 4264609..4264611)
+ /locus_tag="SARI_04342"
+ /note="active site"
+ /db_xref="CDD:206769"
+ misc_feature 4264744..4264905
+ /locus_tag="SARI_04342"
+ /note="Polynucleotide phosphorylase (PNPase) K homology
+ RNA-binding domain (KH). PNPase is a polyribonucleotide
+ nucleotidyl transferase that degrades mRNA in prokaryotes
+ and plant chloroplasts. The C-terminal region of PNPase
+ contains domains homologous to...; Region: PNPase_KH;
+ cd02393"
+ /db_xref="CDD:239086"
+ misc_feature order(4264774..4264776,4264780..4264788,4264792..4264806,
+ 4264813..4264818,4264825..4264830,4264843..4264854)
+ /locus_tag="SARI_04342"
+ /note="putative nucleic acid binding region [nucleotide
+ binding]; other site"
+ /db_xref="CDD:239086"
+ misc_feature 4264795..4264806
+ /locus_tag="SARI_04342"
+ /note="G-X-X-G motif; other site"
+ /db_xref="CDD:239086"
+ misc_feature 4264951..4265154
+ /locus_tag="SARI_04342"
+ /note="S1_PNPase: Polynucleotide phosphorylase (PNPase),
+ ), S1-like RNA-binding domain. PNPase is a
+ polyribonucleotide nucleotidyl transferase that degrades
+ mRNA. It is a trimeric multidomain protein. The C-terminus
+ contains the S1 domain which binds ssRNA; Region:
+ S1_PNPase; cd04472"
+ /db_xref="CDD:239918"
+ misc_feature order(4264975..4264977,4264999..4265001,4265029..4265031,
+ 4265035..4265037)
+ /locus_tag="SARI_04342"
+ /note="RNA binding site [nucleotide binding]; other site"
+ /db_xref="CDD:239918"
+ misc_feature 4265092..4265097
+ /locus_tag="SARI_04342"
+ /note="domain interface; other site"
+ /db_xref="CDD:239918"
+ unsure 4265221..4265383
+ /note="Sequence derived from one plasmid subclone"
+ gene 4265333..4266217
+ /locus_tag="SARI_04343"
+ CDS 4265333..4266217
+ /locus_tag="SARI_04343"
+ /inference="protein motif:Gene3D:IPR011990"
+ /inference="protein motif:HMMPfam:IPR001440"
+ /inference="protein motif:HMMSmart:IPR013026"
+ /inference="similar to AA sequence:INSD:AAL22153.1"
+ /note="lipoprotein that appears to be involved in cell
+ division; interacts with the periplasmic protease Prc and
+ may be activated by protease processing"
+ /codon_start=1
+ /transl_table=11
+ /product="lipoprotein NlpI"
+ /protein_id="YP_001573264.1"
+ /db_xref="GI:161506152"
+ /db_xref="InterPro:IPR001440"
+ /db_xref="InterPro:IPR011990"
+ /db_xref="InterPro:IPR013026"
+ /translation="MKPFLRWCFVATALTLAGCSNSAWRKSEVLAVPLQPTLQQEVIL
+ ARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYL
+ GIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDD
+ PNDPFRSLWLYLAEQKLNEKQAKEALKQRFEKADKEQWGWNIVEFFLGDISEATLMDR
+ LKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFVEHRYALL
+ ELSLLGQEQDDLAESDQQ"
+ misc_feature 4265333..4266214
+ /locus_tag="SARI_04343"
+ /note="lipoprotein NlpI; Provisional; Region: PRK11189"
+ /db_xref="CDD:236875"
+ misc_feature 4265519..4265818
+ /locus_tag="SARI_04343"
+ /note="Tetratricopeptide repeat domain; typically contains
+ 34 amino acids
+ [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
+ X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
+ a variety of organisms including bacteria, cyanobacteria,
+ yeast, fungi; Region: TPR; cd00189"
+ /db_xref="CDD:238112"
+ misc_feature order(4265519..4265524,4265528..4265533,4265540..4265545,
+ 4265630..4265635,4265639..4265644,4265651..4265656,
+ 4265732..4265737,4265744..4265749,4265756..4265761)
+ /locus_tag="SARI_04343"
+ /note="binding surface"
+ /db_xref="CDD:238112"
+ misc_feature order(4265537..4265539,4265573..4265575,4265585..4265587,
+ 4265594..4265596,4265639..4265641,4265675..4265677,
+ 4265687..4265689,4265696..4265698,4265741..4265743,
+ 4265777..4265779,4265789..4265791,4265798..4265800)
+ /locus_tag="SARI_04343"
+ /note="TPR motif; other site"
+ /db_xref="CDD:238112"
+ gene 4266345..4268294
+ /locus_tag="SARI_04344"
+ CDS 4266345..4268294
+ /locus_tag="SARI_04344"
+ /inference="protein motif:HMMPfam:IPR001650"
+ /inference="protein motif:HMMPfam:IPR005580"
+ /inference="protein motif:HMMPfam:IPR011545"
+ /inference="protein motif:HMMSmart:IPR001650"
+ /inference="protein motif:HMMSmart:IPR014001"
+ /inference="protein motif:ScanRegExp:IPR000629"
+ /note="participates in the assembly of the large subunit
+ of the ribosome; plays a key role in optimal cell growth
+ at low temperature and is required for normal cell
+ division"
+ /codon_start=1
+ /transl_table=11
+ /product="ATP-dependent RNA helicase DeaD"
+ /protein_id="YP_001573265.1"
+ /db_xref="GI:161506153"
+ /db_xref="InterPro:IPR000629"
+ /db_xref="InterPro:IPR001650"
+ /db_xref="InterPro:IPR005580"
+ /db_xref="InterPro:IPR011545"
+ /db_xref="InterPro:IPR014001"
+ /translation="MMSYVDWPPLILRHTYYMAEFETTFADLGLKAPILEALNDLGYE
+ KPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAFSLPLLNNLDPELKAPQILVLAPTRE
+ LAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRG
+ TLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRF
+ MKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFLEAEDFDAAIIFVRTKNATL
+ EVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLV
+ VNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTMKLTIPEVELPN
+ AELLGKRRLEKFAAKVQQQLESSDLDQYRALLAKIKPSAEGEELDLETLAAALLKMAQ
+ GERPLILPPDAPMRPKREFRDRDDRGPRDRGPRGDREDRPRRERRDVGDMQLYRIEVG
+ RDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMPGEVLQHFTRTRILN
+ KPMNMQLLGDAQPHTGGERRGGGRSFGGERREGGRNFSGERREGGRGDGRRFSGERRF
+ SGERRESRGPRRDDSTGRRRFGGDA"
+ misc_feature 4266417..4267022
+ /locus_tag="SARI_04344"
+ /note="DEAD-box helicases. A diverse family of proteins
+ involved in ATP-dependent RNA unwinding, needed in a
+ variety of cellular processes including splicing, ribosome
+ biogenesis and RNA degradation. The name derives from the
+ sequence of the Walker B motif; Region: DEADc; cd00268"
+ /db_xref="CDD:238167"
+ misc_feature 4266456..4267061
+ /locus_tag="SARI_04344"
+ /note="DEAD-like helicases superfamily; Region: DEXDc;
+ smart00487"
+ /db_xref="CDD:214692"
+ misc_feature 4266552..4266566
+ /locus_tag="SARI_04344"
+ /note="ATP binding site [chemical binding]; other site"
+ /db_xref="CDD:238167"
+ misc_feature 4266861..4266872
+ /locus_tag="SARI_04344"
+ /note="Mg++ binding site [ion binding]; other site"
+ /db_xref="CDD:238167"
+ misc_feature 4266954..4266962
+ /locus_tag="SARI_04344"
+ /note="motif III; other site"
+ /db_xref="CDD:238167"
+ misc_feature 4267050..4267394
+ /locus_tag="SARI_04344"
+ /note="Helicase superfamily c-terminal domain; associated
+ with DEXDc-, DEAD-, and DEAH-box proteins, yeast
+ initiation factor 4A, Ski2p, and Hepatitis C virus NS3
+ helicases; this domain is found in a wide variety of
+ helicases and helicase related proteins; may...; Region:
+ HELICc; cd00079"
+ /db_xref="CDD:238034"
+ misc_feature order(4267152..4267163,4267221..4267226,4267299..4267307)
+ /locus_tag="SARI_04344"
+ /note="nucleotide binding region [chemical binding]; other
+ site"
+ /db_xref="CDD:238034"
+ misc_feature order(4267323..4267325,4267386..4267388)
+ /locus_tag="SARI_04344"
+ /note="ATP-binding site [chemical binding]; other site"
+ /db_xref="CDD:238034"
+ misc_feature 4267848..4268066
+ /locus_tag="SARI_04344"
+ /note="RNA recognition motif in Escherichia coli
+ cold-shock DEAD box protein A (CsdA) and similar proteins;
+ Region: RRM_EcCsdA_like; cd12499"
+ /db_xref="CDD:240943"
+ misc_feature order(4267869..4267871,4267884..4267895,4267899..4267907,
+ 4267911..4267916,4267932..4267934,4267941..4267952,
+ 4268040..4268045,4268052..4268054)
+ /locus_tag="SARI_04344"
+ /note="putative RNA binding site [nucleotide binding];
+ other site"
+ /db_xref="CDD:240943"
+ gene 4268409..4269692
+ /locus_tag="SARI_04345"
+ CDS 4268409..4269692
+ /locus_tag="SARI_04345"
+ /inference="protein motif:HMMPfam:IPR002091"
+ /inference="protein motif:HMMTigr:IPR013059"
+ /inference="protein motif:ScanRegExp:IPR013061"
+ /inference="similar to AA sequence:REFSEQ:NP_462192.1"
+ /note="tryptophan transporter of high affinity"
+ /codon_start=1
+ /transl_table=11
+ /product="tryptophan permease"
+ /protein_id="YP_001573266.1"
+ /db_xref="GI:161506154"
+ /db_xref="InterPro:IPR002091"
+ /db_xref="InterPro:IPR013059"
+ /db_xref="InterPro:IPR013061"
+ /translation="MDGHTINDGRNGCMSTLTTTQTSPSLLGGVVIIGGTIIGAGMFS
+ LPVVMSGAWFFWSIAALVFTWFCMLHSGLMILEANLNYRIGSSFDTITKDLLGKGWNV
+ VNGISIAFVLYILTYAYISASGSILHHTFAEMSLNVPARAAGFAFALLVAFVVWLSTK
+ AVSRMTAIVLGAKVITFFLTFGSLLGHVTSTTLFNVADGNASYTPYLLMTLPFCLASF
+ GYHGNVPSLMKYYGKDPRTIVKCLIYGTLLALALYSVWLLGTMGNIPRPEFIGIAQKG
+ GNIDVLVQALSGVLNSRSLDLLLVVFSNFAVASSFLGVTLGLFDYLADLFGFDDSAMG
+ RFKTALLTFLPPIIGGLLYPNGFLYAIGYAGLAATIWAAIVPALLARKSRQRFGSPKF
+ RVWGGTPMIMLILLFGVGNALVHILSSFNLLPVYQ"
+ misc_feature 4268532..4269689
+ /locus_tag="SARI_04345"
+ /note="tryptophan permease; Provisional; Region: PRK10483"
+ /db_xref="CDD:182492"
+ misc_feature 4268532..4269632
+ /locus_tag="SARI_04345"
+ /note="aromatic amino acid transport protein; Region:
+ araaP; TIGR00837"
+ /db_xref="CDD:233146"
+ gene complement(4269779..4270786)
+ /locus_tag="SARI_04346"
+ CDS complement(4269779..4270786)
+ /locus_tag="SARI_04346"
+ /inference="protein motif:Gene3D:IPR011251"
+ /inference="protein motif:HMMPfam:IPR011251"
+ /inference="protein motif:superfamily:IPR011251"
+ /inference="similar to AA sequence:REFSEQ:YP_218204.1"
+ /note="'KEGG: eci:UTI89_C3587 3.2e-167 yhbW; hypothetical
+ protein K00494;
+ COG: COG2141 Coenzyme F420-dependent N5,N10-methylene
+ tetrahydromethanopterin reductase and related
+ flavin-dependent oxidoreductases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573267.1"
+ /db_xref="GI:161506155"
+ /db_xref="InterPro:IPR011251"
+ /translation="MTSNSVPFSVLDLAPIPEGACAKEAFSHSLDLARLAEKRGYHRY
+ WLAEHHNMTGIASAATSVLIGYLAANTTTLHLGSGGVMLPNHSPLVIAEQFGTLNTLY
+ PGRIDLGLGRAPGSDQPTMRALRRHMRGDIDNFPRDVAELVDWFDARDPNPHVRPVPG
+ YGEQIPVWLLGSSLYSAQLAAQLGLPFAFASHFAPDMLFQALHLYRANFTPSARLEKP
+ YAMVCINIIAADSNRDAEFLFTSMQQAFVKLRRGETGQLPPPIENMDAFWSSSEQYGV
+ QQALSMSLVGDKAKVRHGLESILRETQADEIMVNGQIFDHQARLHSFDLAMQVKEALA
+ G"
+ misc_feature complement(4269788..4270786)
+ /locus_tag="SARI_04346"
+ /note="hypothetical protein; Provisional; Region:
+ PRK10508"
+ /db_xref="CDD:182505"
+ misc_feature complement(<4270220..4270765)
+ /locus_tag="SARI_04346"
+ /note="Flavin-utilizing monoxygenases; Region:
+ Flavin_utilizing_monoxygenases; cl07892"
+ /db_xref="CDD:244823"
+ gene complement(4270894..4271790)
+ /locus_tag="SARI_04347"
+ CDS complement(4270894..4271790)
+ /locus_tag="SARI_04347"
+ /inference="protein motif:BlastProDom:IPR001539"
+ /inference="protein motif:HMMPfam:IPR001539"
+ /inference="similar to AA sequence:INSD:AAL22147.1"
+ /note="'KEGG: eci:UTI89_C3586 7.6e-150 yhbV; hypothetical
+ protein YhbV K01423;
+ COG: COG0826 Collagenase and related proteases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573268.1"
+ /db_xref="GI:161506156"
+ /db_xref="InterPro:IPR001539"
+ /translation="MAVRGTMKYSLGPVLYYWPKETLENFYQQAMESSADLIYLGEAV
+ CSKRRATKIGDWLEMAKSLAGSGKQVVLSTLALVQASSELGELKRYVDNGDFLLEASD
+ LGVVNLCAERKLPFVAGHALNCYNAVTLRLLLKEGMVRWCMPVELSRDWLVNLLNQCD
+ ELGIRNQFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIQYPNGRNVLSQENQ
+ QVFVLNGIQTMSGYVYNLGNELASMRGLVDIVRLSPLGTETFAMLDAFRANENGGAPL
+ PLTAHSDCNGYWKRLAGLELQA"
+ misc_feature complement(4270897..4271772)
+ /locus_tag="SARI_04347"
+ /note="putative protease; Provisional; Region: PRK15447"
+ /db_xref="CDD:237968"
+ misc_feature complement(4270903..4271769)
+ /locus_tag="SARI_04347"
+ /note="Collagenase and related proteases
+ [Posttranslational modification, protein turnover,
+ chaperones]; Region: COG0826"
+ /db_xref="CDD:223896"
+ gene complement(4271781..4272776)
+ /locus_tag="SARI_04348"
+ CDS complement(4271781..4272776)
+ /locus_tag="SARI_04348"
+ /inference="protein motif:BlastProDom:IPR001539"
+ /inference="protein motif:HMMPfam:IPR001539"
+ /inference="protein motif:ScanRegExp:IPR001539"
+ /inference="protein motif:superfamily:IPR001697"
+ /inference="similar to AA sequence:INSD:AAV78972.1"
+ /note="'KEGG: stm:STM3274 2.4e-176 yhbU; putative protease
+ K08303;
+ COG: COG0826 Collagenase and related proteases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative protease"
+ /protein_id="YP_001573269.1"
+ /db_xref="GI:161506157"
+ /db_xref="InterPro:IPR001539"
+ /db_xref="InterPro:IPR001697"
+ /translation="MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTE
+ KKLQEAVSFVHQHRRKLHIAINTFAHPDGYARWQRAVDMAAQLGADALILADIAMLEY
+ AAVRYPHIERHVSVQASATNEEAIRFYHRNFDVHRVVLPRVLSIHQVKQLARVTPVPL
+ EVFAFGSLCIMAEGRCYLSSYLTGESPNTVGACSPARFVRWKQTPQGLESRLNDVLID
+ RYQDGENAGYPTLCKGRYLVDGERYHALEEPTSLNTLELLPELMAANIASVKIEGRQR
+ SPAYVSQVAKVWRQAIDRCKAAPQNFIAQRDWMETLGAMSEGTQTTLGAYHRKWQ"
+ misc_feature complement(4271784..4272776)
+ /locus_tag="SARI_04348"
+ /note="Collagenase and related proteases
+ [Posttranslational modification, protein turnover,
+ chaperones]; Region: COG0826"
+ /db_xref="CDD:223896"
+ misc_feature complement(4271784..4272476)
+ /locus_tag="SARI_04348"
+ /note="Peptidase family U32; Region: Peptidase_U32;
+ pfam01136"
+ /db_xref="CDD:216321"
+ gene 4273041..4273517
+ /locus_tag="SARI_04349"
+ CDS 4273041..4273517
+ /locus_tag="SARI_04349"
+ /inference="protein motif:HMMPfam:IPR003033"
+ /inference="similar to AA sequence:INSD:AAL22145.1"
+ /note="'COG: COG3154 Putative lipid carrier protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573270.1"
+ /db_xref="GI:161506158"
+ /db_xref="InterPro:IPR003033"
+ /translation="MSVPVKLTPFALKRQVLEQVLSWQFRQALADGELEFLEGCWLSI
+ HVRDIGLKWYTTVENEKLIVSQQADADVSFSADASDLLMIAARKQDPDTLFFQRRLVI
+ EGDTELGLYVKNLMDAIELEQMPKALRVMLLQLADFVEAGMKNSPQTKQTSVGEPC"
+ misc_feature 4273041..4273514
+ /locus_tag="SARI_04349"
+ /note="Putative lipid carrier protein [Lipid metabolism];
+ Region: COG3154"
+ /db_xref="CDD:225696"
+ gene 4273511..4274014
+ /locus_tag="SARI_04350"
+ CDS 4273511..4274014
+ /locus_tag="SARI_04350"
+ /inference="protein motif:HMMPfam:IPR000182"
+ /inference="similar to AA sequence:INSD:AAV78970.1"
+ /note="'KEGG: sec:SC3213 1.4e-86 yhbS; putative ABC
+ superfamily (membrane) transport protein K03824;
+ COG: COG3153 Predicted acetyltransferase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573271.1"
+ /db_xref="GI:161506159"
+ /db_xref="InterPro:IPR000182"
+ /translation="MLIRVEIPIDAPGIDALLRRSFESDAEARLVHDLREDGFLTLGL
+ VATDDEGQVVGYVAFSPVDVQGEDLQWVGMAPLAVDEQYRGQGLARQLVYEGLDSLNE
+ FGYAAVVTLGDPALYSRFGFELAAHYDLHCRWPGTESAFQIHRLAEDALEGVTGLVEY
+ HDHFNRF"
+ misc_feature 4273640..4273837
+ /locus_tag="SARI_04350"
+ /note="N-Acyltransferase superfamily: Various enzymes that
+ characteristically catalyze the transfer of an acyl group
+ to a substrate; Region: NAT_SF; cd04301"
+ /db_xref="CDD:173926"
+ misc_feature order(4273739..4273747,4273775..4273780)
+ /locus_tag="SARI_04350"
+ /note="Coenzyme A binding pocket [chemical binding]; other
+ site"
+ /db_xref="CDD:173926"
+ gene complement(4274001..4274363)
+ /locus_tag="SARI_04352"
+ CDS complement(4274001..4274363)
+ /locus_tag="SARI_04352"
+ /inference="protein motif:HMMPfam:IPR000305"
+ /inference="protein motif:HMMSmart:IPR000305"
+ /inference="similar to AA sequence:REFSEQ:YP_218199.1"
+ /note="'COG: COG2827 Predicted endonuclease containing a
+ URI domain;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="GIY-YIG nuclease superfamily protein"
+ /protein_id="YP_001573272.1"
+ /db_xref="GI:161506161"
+ /db_xref="InterPro:IPR000305"
+ /translation="MSIFILAYTGNLKIIMLMATMTPWYLYLIRTADNALYTGITTDV
+ ARRYRQHQTGKGAKALRGKGELTLAFAAQVGDRSLALRIEYRIKQLTKRQKERLVTEQ
+ EAFESLLSSLQTPVLKND"
+ misc_feature complement(4274091..4274294)
+ /locus_tag="SARI_04352"
+ /note="The GIY-YIG domain of uncharacterized protein
+ family UPF0213 related to structure-specific endonuclease
+ SLX1; Region: GIY-YIG_UPF0213; cd10456"
+ /db_xref="CDD:198403"
+ misc_feature complement(order(4274247..4274255,4274283..4274291))
+ /locus_tag="SARI_04352"
+ /note="GIY-YIG motif/motif A; other site"
+ /db_xref="CDD:198403"
+ misc_feature complement(order(4274112..4274114,4274211..4274213,
+ 4274223..4274225,4274247..4274249,4274253..4274255,
+ 4274283..4274285))
+ /locus_tag="SARI_04352"
+ /note="putative active site [active]"
+ /db_xref="CDD:198403"
+ misc_feature complement(4274112..4274114)
+ /locus_tag="SARI_04352"
+ /note="putative metal binding site [ion binding]; other
+ site"
+ /db_xref="CDD:198403"
+ gene 4274356..4274799
+ /locus_tag="SARI_04351"
+ CDS 4274356..4274799
+ /locus_tag="SARI_04351"
+ /inference="protein motif:HMMPIR:IPR011194"
+ /inference="protein motif:superfamily:IPR009002"
+ /inference="similar to AA sequence:INSD:CAD07792.1"
+ /note="'COG: COG3787 Uncharacterized protein conserved in
+ bacteria;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573273.1"
+ /db_xref="GI:161506160"
+ /db_xref="InterPro:IPR009002"
+ /db_xref="InterPro:IPR011194"
+ /translation="MDTLTAISRWLAKQHVVTWCVCHEGELWCANAFYLFDAQHVAFY
+ VLTDDKTRHAQMSGACAPVAGTVNGQPKTVARIRGVQFKGEIRRLEGQESDVARKAYL
+ RRFPVARVLPAPVWEIRLDEIKFTDNTLGFGKKMRWLRDSSAQQA"
+ misc_feature 4274356..4274778
+ /locus_tag="SARI_04351"
+ /note="hypothetical protein; Provisional; Region:
+ PRK03467"
+ /db_xref="CDD:235127"
+ gene complement(4274779..4275297)
+ /locus_tag="SARI_04353"
+ CDS complement(4274779..4275297)
+ /locus_tag="SARI_04353"
+ /inference="protein motif:HMMPfam:IPR002818"
+ /inference="protein motif:HMMTigr:IPR006286"
+ /inference="similar to AA sequence:INSD:CAD07791.1"
+ /note="'KEGG: spt:SPA3138 6.7e-87 yhbO; hypothetical
+ protein K05520;
+ COG: COG0693 Putative intracellular protease/amidase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573274.1"
+ /db_xref="GI:161506162"
+ /db_xref="InterPro:IPR002818"
+ /db_xref="InterPro:IPR006286"
+ /translation="MSKKIAVLITDEFEDSEFTSPAAEFRQAGHEVITIEKEAGKTVK
+ GKKGEASVTIDKAIDDVRPDEFDALLLPGGHSPDHLRGDSRFVDFTRDFVNSGKPVFA
+ ICHGPQLLISADVIRGRKLTAVKPIIIDVKNAGAEFYDQEVVVDKDQLVTSRTPDDLP
+ AFNREALRLLGA"
+ misc_feature complement(4274785..4275288)
+ /locus_tag="SARI_04353"
+ /note="intracellular protease, PfpI family; Region: PfpI;
+ TIGR01382"
+ /db_xref="CDD:233389"
+ misc_feature complement(4274791..4275288)
+ /locus_tag="SARI_04353"
+ /note="A type 1 glutamine amidotransferase (GATase1)-like
+ domain found in PfpI from Pyrococcus furiosus; Region:
+ GATase1_PfpI_like; cd03134"
+ /db_xref="CDD:153228"
+ misc_feature complement(4274983..4274988)
+ /locus_tag="SARI_04353"
+ /note="proposed catalytic triad [active]"
+ /db_xref="CDD:153228"
+ misc_feature complement(4274986..4274988)
+ /locus_tag="SARI_04353"
+ /note="conserved cys residue [active]"
+ /db_xref="CDD:153228"
+ gene 4275425..4276060
+ /locus_tag="SARI_04354"
+ CDS 4275425..4276060
+ /locus_tag="SARI_04354"
+ /inference="protein motif:HMMPfam:IPR000534"
+ /inference="similar to AA sequence:INSD:AAX67115.1"
+ /note="'KEGG: ccr:CC3604 7.8e-11 NADH-ubiquinone
+ oxidoreductase 39 kDa subunit precursor, putative
+ K00329:K00356;
+ COG: COG0702 Predicted nucleoside-diphosphate-sugar
+ epimerases;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573275.1"
+ /db_xref="GI:161506163"
+ /db_xref="InterPro:IPR000534"
+ /translation="MSQVLITGATGLVGGHLLRMLINTPQVSAIAAPTRRPLTDIVGV
+ YNPHDLQLTDALAQVTDPVDIVFCCLGTTRREAGSKAAFIHADYTLVVDTALTGRRLG
+ AQHMLVVSSMGANAHSPFFYNRVKGEMEEALIAQKWPRLTIARPSMLLGDRTTRRVNE
+ TLFAPLFRLLPGNWKSIDARDVARAMLAEALAPAQEGVTILTSSQLREKAG"
+ misc_feature 4275434..4276042
+ /locus_tag="SARI_04354"
+ /note="CC3(TIP30)-like, atypical (a) SDRs; Region:
+ CC3_like_SDR_a; cd05250"
+ /db_xref="CDD:187560"
+ misc_feature 4275434..4275970
+ /locus_tag="SARI_04354"
+ /note="NADH(P)-binding; Region: NAD_binding_10; pfam13460"
+ /db_xref="CDD:222146"
+ misc_feature order(4275446..4275448,4275452..4275463,4275527..4275532,
+ 4275572..4275574,4275629..4275640,4275680..4275682,
+ 4275692..4275694,4275749..4275757,4275788..4275790,
+ 4275800..4275802,4275860..4275871)
+ /locus_tag="SARI_04354"
+ /note="NAD binding site [chemical binding]; other site"
+ /db_xref="CDD:187560"
+ misc_feature order(4275683..4275685,4275755..4275757,4275788..4275790,
+ 4275800..4275802)
+ /locus_tag="SARI_04354"
+ /note="active site"
+ /db_xref="CDD:187560"
+ gene complement(4276127..4276702)
+ /locus_tag="SARI_04355"
+ CDS complement(4276127..4276702)
+ /locus_tag="SARI_04355"
+ /inference="protein motif:HMMPfam:IPR007055"
+ /inference="protein motif:HMMSmart:IPR014004"
+ /inference="similar to AA sequence:INSD:AAO70725.1"
+ /note="'COG: COG2823 Predicted periplasmic or secreted
+ lipoprotein;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573276.1"
+ /db_xref="GI:161506164"
+ /db_xref="InterPro:IPR007055"
+ /db_xref="InterPro:IPR014004"
+ /translation="MKAFSPLAVLISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQ
+ VDDGTLELRVSSALSKDEQIKKETHINVTAYQGKVLLVGQSPNSELSARAKQIAMGVE
+ GATEVYNEIRQGQPIGLGTASNDTWITTKVRSQLLTSDQVKSSNVKVTTENGEVFLLG
+ LVTKREGKAAADITSRVSGVKRVTTAFTYIK"
+ misc_feature complement(4276130..4276702)
+ /locus_tag="SARI_04355"
+ /note="outer membrane lipoprotein; Provisional; Region:
+ PRK11023"
+ /db_xref="CDD:182907"
+ misc_feature complement(4276358..4276507)
+ /locus_tag="SARI_04355"
+ /note="BON domain; Region: BON; pfam04972"
+ /db_xref="CDD:203137"
+ misc_feature complement(4276151..4276285)
+ /locus_tag="SARI_04355"
+ /note="BON domain; Region: BON; pfam04972"
+ /db_xref="CDD:203137"
+ gene complement(4276712..4277323)
+ /locus_tag="SARI_04356"
+ CDS complement(4276712..4277323)
+ /locus_tag="SARI_04356"
+ /inference="protein motif:HMMTigr:IPR004515"
+ /inference="similar to AA sequence:REFSEQ:NP_462179.1"
+ /note="Required for the timely initiation of chromosomal
+ replication via direct interactions with the dnaA
+ initiator protein"
+ /codon_start=1
+ /transl_table=11
+ /product="DnaA initiator-associating protein DiaA"
+ /protein_id="YP_001573277.1"
+ /db_xref="GI:161506165"
+ /db_xref="InterPro:IPR004515"
+ /translation="MTILRISVLERIKVCFTESIQTQIAAAEALPDAISRAAMTLVHS
+ LLNGNKILCCGNGTSAANAQHFAASMINRFETERPSLPAIALNTDNVVLTAIANDRLH
+ DEVYAKQVRALGHAGDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGL
+ LGPQDVEIRIPSHHSARIQEMHMLTVNCLCDLIDNTLFPHQDD"
+ misc_feature complement(4276739..4277278)
+ /locus_tag="SARI_04356"
+ /note="Phosphoheptose isomerase is a member of the SIS
+ (Sugar ISomerase) superfamily. Phosphoheptose isomerase
+ catalyzes the isomerization of sedoheptulose 7-phosphate
+ into D-glycero-D-mannoheptose 7-phosphate. This is the
+ first step of the biosynthesis of...; Region: SIS_GmhA;
+ cd05006"
+ /db_xref="CDD:240139"
+ misc_feature complement(order(4276739..4276741,4276751..4276753,
+ 4276763..4276765,4276772..4276774,4276784..4276789,
+ 4277129..4277134,4277150..4277152,4277210..4277212,
+ 4277219..4277221,4277255..4277257,4277267..4277269))
+ /locus_tag="SARI_04356"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:240139"
+ misc_feature complement(order(4276787..4276789,4276799..4276801,
+ 4276937..4276939,4276946..4276954,4277150..4277158))
+ /locus_tag="SARI_04356"
+ /note="active site"
+ /db_xref="CDD:240139"
+ gene complement(4277324..4277719)
+ /locus_tag="SARI_04357"
+ CDS complement(4277324..4277719)
+ /locus_tag="SARI_04357"
+ /inference="protein motif:HMMPfam:IPR003509"
+ /inference="protein motif:HMMTigr:IPR003509"
+ /inference="similar to AA sequence:SwissProt:Q8ZLU3"
+ /note="'KEGG: eci:UTI89_C3574 1.2e-55 yraN; hypothetical
+ protein YraN K07460;
+ COG: COG0792 Predicted endonuclease distantly related to
+ archaeal Holliday junction resolvase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573278.1"
+ /db_xref="GI:161506166"
+ /db_xref="InterPro:IPR003509"
+ /translation="MAQIPARGNYSRQLTCKQAGDAWEAAARRWLESKGLRFIAANVR
+ VRGGEIDLIMRDGKTTVFVEVRYRRSGLYGGAAASVTRSKQHKLLHTAHLWLARQNGS
+ FDTVDCRFDVLAFTGNEIEWFRDAFNDHS"
+ misc_feature complement(4277336..4277671)
+ /locus_tag="SARI_04357"
+ /note="TIGR00252 family protein; Region: TIGR00252"
+ /db_xref="CDD:129354"
+ gene complement(4277677..4279728)
+ /locus_tag="SARI_04358"
+ CDS complement(4277677..4279728)
+ /locus_tag="SARI_04358"
+ /inference="protein motif:HMMPfam:IPR007443"
+ /note="'COG: COG3107 Putative lipoprotein;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573279.1"
+ /db_xref="GI:161506167"
+ /db_xref="InterPro:IPR007443"
+ /translation="MVPSTFSRLKAARTLPVVLAALLFAGCGTQAPDQSAAYMQSSAQ
+ ADSAFYLHQMQQSADDSKTNWQLLAIRALLKEGKSQQAVELFNQLPQNLNDTQRREQS
+ LQAVEIKLAQKDVAGAQALLDRLKPTDVAPNQLARYWQAQIDASQGRPSLTLLRALIA
+ QEPLLAAKDKQKNIDATWQALSAMTQDQARTLVINADENVLQGWLDLQRVWFDNRNDP
+ DMLKAGIADWQKRYPQNPGTKMLPTPLVNVQRFKPASTSKIALLLPLSGQAAVFGRTI
+ QQGFEAAKNLGTQAVEMQPAAAPDAPVEPDVDDTQPQIIDGVASPSQASVSDLTDDEQ
+ SQSATPVSAPQTPPAQPATANAPANPSAELKIYDTSSQPLDQILAQVQQDGASIVVGP
+ LLKNNVEALMKSNTPLNVLALNQPETVRSFPNICYFALSPEDEARDAAHHIYDQGKQT
+ PLLLLPRSSLGDRVANAFTQEWQKLGGGIVLQQKFGSVAELKMGVNGGAGIALTGSPV
+ AASVPAQPGVTIGGLTIPAPPTNAQITGGGHVDAVYILATPEEIGFIKPMIAMRNGTR
+ SGATLYASSRSAQGTSGPDFRLEMEGLQYSEIPMLAGGNMSLMQQAMNAVHNDYSLAR
+ MYAMGVDAWTLANHFSQMRQVPGFEINGNTGALTASPDCVINRKLSWLKYQQGEIIPA
+ S"
+ misc_feature complement(<4278874..4278957)
+ /locus_tag="SARI_04358"
+ /note="Type 1 periplasmic binding fold superfamily;
+ Region: Periplasmic_Binding_Protein_Type_1; cl10011"
+ /db_xref="CDD:245225"
+ misc_feature complement(4277680..>4278642)
+ /locus_tag="SARI_04358"
+ /note="Putative lipoprotein [General function prediction
+ only]; Region: LppC; COG3107"
+ /db_xref="CDD:225649"
+ misc_feature complement(4277713..4278642)
+ /locus_tag="SARI_04358"
+ /note="Periplasmic binding component of lipoprotein LppC,
+ an immunodominant antigen; Region:
+ PBP1_YraM_LppC_lipoprotein_like; cd06339"
+ /db_xref="CDD:107334"
+ misc_feature complement(order(4278004..4278006,4278085..4278087,
+ 4278349..4278351,4278484..4278489,4278544..4278552))
+ /locus_tag="SARI_04358"
+ /note="putative ligand binding site [chemical binding];
+ other site"
+ /db_xref="CDD:107334"
+ unsure 4278114..4278157
+ /note="Sequence derived from one plasmid subclone"
+ gene 4279791..4280654
+ /locus_tag="SARI_04359"
+ CDS 4279791..4280654
+ /locus_tag="SARI_04359"
+ /inference="protein motif:HMMPfam:IPR000878"
+ /inference="protein motif:HMMPIR:IPR008189"
+ /inference="protein motif:HMMTigr:IPR008189"
+ /inference="protein motif:ScanRegExp:IPR008189"
+ /inference="protein motif:superfamily:IPR000878"
+ /inference="similar to AA sequence:INSD:CAD07785.1"
+ /note="'KEGG: eci:UTI89_C3573 1.2e-142 yraL; hypothetical
+ protein;
+ COG: COG0313 Predicted methyltransferases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573280.1"
+ /db_xref="GI:161506168"
+ /db_xref="InterPro:IPR000878"
+ /db_xref="InterPro:IPR008189"
+ /translation="MKQNESADNSQGQLFIVPTPIGNLADITQRALEVLQAVDLIAAE
+ DTRHTGLLLQHFAINARLFALHDHNEQQKAETLVAKLKEGQNIALVSDAGTPLINDPG
+ YHLVRTCREAGIRVVPLPGPCAAIAALSAAGLPSDRFCYEGFLPAKSKGRRDALKAVE
+ TEPRTLIFYESTHRLLDSLEDMVAVWGGSRYVVLARELTKTWETIHGAPVGELLAWVK
+ EDENRRKGEMVLIVEGHKAQEDDLPADALRTLALLQAELPLKKAAALAAEIHGVKKNA
+ LYKYALAQQGE"
+ misc_feature 4279791..4280651
+ /locus_tag="SARI_04359"
+ /note="SAM-dependent 16S ribosomal RNA C1402 ribose
+ 2'-O-methyltransferase; Provisional; Region:
+ PRK14994"
+ /db_xref="CDD:184956"
+ misc_feature 4279830..4280492
+ /locus_tag="SARI_04359"
+ /note="Ribosomal RNA small subunit methyltransferase I,
+ also known as rRNA (cytidine-2'-O-)-methyltransferase
+ RsmI; Region: RsmI; cd11648"
+ /db_xref="CDD:212507"
+ misc_feature order(4279851..4279853,4280067..4280075,4280082..4280087,
+ 4280157..4280162,4280295..4280297,4280373..4280375,
+ 4280379..4280384,4280469..4280477)
+ /locus_tag="SARI_04359"
+ /note="putative SAM binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:212507"
+ misc_feature order(4279869..4279880,4279884..4279886,4280073..4280090,
+ 4280097..4280102,4280106..4280111,4280142..4280144,
+ 4280148..4280159,4280163..4280168,4280175..4280180,
+ 4280205..4280219)
+ /locus_tag="SARI_04359"
+ /note="putative homodimer interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:212507"
+ gene 4280737..4280874
+ /locus_tag="SARI_04360"
+ CDS 4280737..4280874
+ /locus_tag="SARI_04360"
+ /note="'Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573281.1"
+ /db_xref="GI:161506169"
+ /translation="MYLFYRLFRPLFLYTEDDLAKVFTALNRVVFVFHNHPVDVGNAL
+ K"
+ gene complement(4281032..4281904)
+ /gene="kbaY"
+ /locus_tag="SARI_04361"
+ CDS complement(4281032..4281904)
+ /gene="kbaY"
+ /locus_tag="SARI_04361"
+ /inference="protein motif:BlastProDom:IPR000771"
+ /inference="protein motif:HMMPfam:IPR000771"
+ /inference="protein motif:HMMTigr:IPR000771"
+ /inference="protein motif:HMMTigr:IPR011288"
+ /inference="protein motif:ScanRegExp:IPR000771"
+ /inference="similar to AA sequence:REFSEQ:YP_001178287.1"
+ /note="'catalyzes the reversible reaction of
+ dihydroxyacetone phosphate with glyceraldehyde 3-phosphate
+ to produce tagatose 1,6-bisphosphate; in enteric bacteria
+ there are two D-tagatose 1,6-bisphosphate-specific
+ aldolases: KbaY (also called AgaY), involved in catabolism
+ of N-acetyl-galactosamine and D-galactosamine, and GatY
+ which is part of the galactitol catabolism pathway'"
+ /codon_start=1
+ /transl_table=11
+ /product="tagatose-bisphosphate aldolase"
+ /protein_id="YP_001573282.1"
+ /db_xref="GI:161506170"
+ /db_xref="InterPro:IPR000771"
+ /db_xref="InterPro:IPR011288"
+ /translation="MSIISTKYLLQDAQEKGYAVPAFNIHNAETIQAILEVCREMKSP
+ VILAGTPGTFKHIALEEIYALCSAYSTSFDIPLALHLDHHESLDDIRHKVNAGVRSAM
+ IDGSHFPFEENVKLVKSVVDFCHSRDCSVEAELGRLGGVEDDMSVDAENAFLTDPQEA
+ KRFVELTGVDSLAVAIGTAHGLYTKKPKIDFQRLAEIREVVDIPLVLHGASDVPDEYV
+ RRTIELGVCKVNVATELKIAFAAAVKKWFIENPDGNDPRYYMRVGMNAMKEVVRSKIT
+ VCNSYGKLLPALQY"
+ misc_feature complement(4281059..4281889)
+ /gene="kbaY"
+ /locus_tag="SARI_04361"
+ /note="Tagatose-1,6-bisphosphate (TBP) aldolase and
+ related Type B Class II aldolases. TBP aldolase is a
+ tetrameric class II aldolase that catalyzes the reversible
+ condensation of dihydroxyacetone phosphate with
+ glyceraldehyde 3-phsophate to produce tagatose 1; Region:
+ TBP_aldolase_IIB; cd00947"
+ /db_xref="CDD:238477"
+ misc_feature complement(4281050..4281880)
+ /gene="kbaY"
+ /locus_tag="SARI_04361"
+ /note="fructose-bisphosphate aldolase; Provisional;
+ Region: PRK09197"
+ /db_xref="CDD:236406"
+ misc_feature complement(order(4281164..4281166,4281173..4281175,
+ 4281185..4281187,4281194..4281199,4281203..4281208,
+ 4281479..4281481,4281698..4281703,4281710..4281712,
+ 4281722..4281724,4281734..4281742,4281749..4281751,
+ 4281809..4281811,4281818..4281826))
+ /gene="kbaY"
+ /locus_tag="SARI_04361"
+ /note="intersubunit interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:238477"
+ misc_feature complement(order(4281206..4281211,4281215..4281217,
+ 4281272..4281274,4281278..4281283,4281356..4281358,
+ 4281362..4281370,4281656..4281661))
+ /gene="kbaY"
+ /locus_tag="SARI_04361"
+ /note="active site"
+ /db_xref="CDD:238477"
+ misc_feature complement(order(4281281..4281283,4281365..4281367,
+ 4281656..4281658))
+ /gene="kbaY"
+ /locus_tag="SARI_04361"
+ /note="zinc binding site [ion binding]; other site"
+ /db_xref="CDD:238477"
+ misc_feature complement(order(4281272..4281274,4281278..4281280,
+ 4281356..4281358,4281362..4281364,4281368..4281370))
+ /gene="kbaY"
+ /locus_tag="SARI_04361"
+ /note="Na+ binding site [ion binding]; other site"
+ /db_xref="CDD:238477"
+ gene complement(4281917..4283071)
+ /locus_tag="SARI_04362"
+ CDS complement(4281917..4283071)
+ /locus_tag="SARI_04362"
+ /inference="protein motif:HMMPfam:IPR001347"
+ /inference="similar to AA sequence:REFSEQ:NP_755760.1"
+ /note="'KEGG: ecc:c3893 1.7e-175 agaS; putative
+ tagatose-6-phosphate ketose/aldose isomerase K02082;
+ COG: COG2222 Predicted phosphosugar isomerases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573283.1"
+ /db_xref="GI:161506171"
+ /db_xref="InterPro:IPR001347"
+ /translation="MSETYTSAAATTETWTEKEIRQQPASWLRSLNHIDNIRSAIDSF
+ LTPLLHKNNLRIILTGAGTSAFIGDIIAPWLASQTGKNICAIPTTDLVTNPTDYLNPS
+ HPLLLISFARSGNSPESVAAVELANHFVPECYHLSITCNEAGSLYQNAVENDNTFALL
+ MPAETHDRGFAMTSSITTMMASCLAVFVPETINSRTFRDVADRCQAILNSLGDFNHGV
+ FGNEPWQRIVYLGSGGLQGAARESSLKVLELTAGKLAAFYDSPTGFRHGPKSLVDSET
+ LIVVYISSHPYTRQYDLDLLAELRRDRQAMRVIAIAAESDAVIEAGPHILLPPARHFI
+ DIELAFCFLMYAQVFALTQSISVGNTPDTPSASGTVNRVVQGVVIHPWQD"
+ misc_feature complement(4281926..4283020)
+ /locus_tag="SARI_04362"
+ /note="putative sugar isomerase, AgaS family; Region:
+ agaS_fam; TIGR02815"
+ /db_xref="CDD:131862"
+ misc_feature complement(4282511..4282909)
+ /locus_tag="SARI_04362"
+ /note="SIS (Sugar ISomerase) domain repeat 1 found in
+ Glucosamine 6-phosphate synthase (GlmS) and
+ Glucosamine-6-phosphate deaminase (GlmD). The SIS domain
+ is found in many phosphosugar isomerases and phosphosugar
+ binding proteins. GlmS contains a N-terminal...; Region:
+ SIS_GlmS_GlmD_1; cd05008"
+ /db_xref="CDD:240141"
+ misc_feature complement(order(4282718..4282720,4282778..4282780,
+ 4282787..4282789,4282799..4282801,4282805..4282807,
+ 4282841..4282846,4282853..4282858,4282886..4282891))
+ /locus_tag="SARI_04362"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:240141"
+ misc_feature complement(order(4282733..4282741,4282880..4282885))
+ /locus_tag="SARI_04362"
+ /note="active site"
+ /db_xref="CDD:240141"
+ misc_feature complement(4281941..4282393)
+ /locus_tag="SARI_04362"
+ /note="AgaS-like protein. AgaS contains a SIS (Sugar
+ ISomerase) domain which is found in many phosphosugar
+ isomerases and phosphosugar binding proteins. AgaS is a
+ putative isomerase in Escherichia coli. It is similar to
+ the glucosamine-6-phosphate synthases; Region:
+ SIS_AgaS_like; cd05010"
+ /db_xref="CDD:240143"
+ misc_feature complement(order(4282223..4282225,4282367..4282369))
+ /locus_tag="SARI_04362"
+ /note="putative active site [active]"
+ /db_xref="CDD:240143"
+ gene complement(4283377..4284510)
+ /locus_tag="SARI_04363"
+ CDS complement(4283377..4284510)
+ /locus_tag="SARI_04363"
+ /inference="protein motif:BlastProDom:IPR011550"
+ /inference="protein motif:HMMPfam:IPR006680"
+ /inference="protein motif:HMMTigr:IPR003764"
+ /inference="protein motif:superfamily:IPR011059"
+ /inference="similar to AA sequence:REFSEQ:ZP_00701210.1"
+ /note="'KEGG: ece:Z4489 4.2e-172 putative
+ N-acetylgalctosamine-6-phosphate deacetylase K02079;
+ COG: COG1820 N-acetylglucosamine-6-phosphate deacetylase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573284.1"
+ /db_xref="GI:161506172"
+ /db_xref="InterPro:IPR003764"
+ /db_xref="InterPro:IPR006680"
+ /db_xref="InterPro:IPR011059"
+ /db_xref="InterPro:IPR011550"
+ /translation="MRQILRARRLLTEQGWLDDHQLRIEEGIITAVEPIPAGIALRDA
+ ELLCPAYIDTHVHGGAGVDVMDESPDALDKLAIHKAREGVASWLPTTVTAPLTAIHRT
+ LERIALRCHSGGPGAQVLGSYLEGPYFTPQNKGAHPPELFRELNLVELNELIAVSQHT
+ LRVVALAPEKTGALETITHLKQQGIRVMLGHSAATWQQTHAAFDAGADGLVHCYNGMT
+ GLHHREPGMVGAGLTDPRAWLELIADGHHVHPTAMKLCCCCAKDRVVLITDAMQAAGQ
+ PDGRYTLCGEEVEMHAGIVRTTSGGLAGSTLSIDAAVRNMVEFTGIATVEAIHMASLH
+ PARLLGIDHHLGSLKTGKRANIIALDNRLYLQQIWIQGQAFPL"
+ misc_feature complement(4283392..4284501)
+ /locus_tag="SARI_04363"
+ /note="N-acetylglucosamine-6-phosphate deacetylase
+ [Carbohydrate transport and metabolism]; Region: NagA;
+ COG1820"
+ /db_xref="CDD:224733"
+ misc_feature complement(4283395..4284501)
+ /locus_tag="SARI_04363"
+ /note="N-acetylglucosamine-6-phosphate deacetylase, NagA,
+ catalyzes the hydrolysis of the N-acetyl group of
+ N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to
+ glucosamine 6-phosphate and acetate. This is the first
+ committed step in the biosynthetic pathway to...; Region:
+ NagA; cd00854"
+ /db_xref="CDD:238434"
+ misc_feature complement(order(4283605..4283607,4283704..4283706,
+ 4283770..4283772,4283863..4283868,4283875..4283877,
+ 4283938..4283940,4284103..4284105,4284136..4284138,
+ 4284340..4284342,4284346..4284348))
+ /locus_tag="SARI_04363"
+ /note="active site"
+ /db_xref="CDD:238434"
+ misc_feature complement(order(4283737..4283739,4283746..4283751,
+ 4283755..4283760,4283764..4283775,4283812..4283817,
+ 4283836..4283838,4283842..4283847,4283851..4283853,
+ 4283869..4283871))
+ /locus_tag="SARI_04363"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:238434"
+ gene complement(4284596..4285873)
+ /locus_tag="SARI_04364"
+ CDS complement(4284596..4285873)
+ /locus_tag="SARI_04364"
+ /inference="protein motif:HMMPfam:IPR012062"
+ /inference="protein motif:HMMPIR:IPR012062"
+ /inference="similar to AA sequence:REFSEQ:ZP_00714300.1"
+ /note="'KEGG: eci:UTI89_C3561 2.4e-201 agaZ; putative
+ tagatose 6-phosphate kinase 2 K00917;
+ COG: COG4573 Predicted tagatose 6-phosphate kinase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573285.1"
+ /db_xref="GI:161506173"
+ /db_xref="InterPro:IPR012062"
+ /translation="MVEQHKRGKANGIYAVCSAHPLVLESAIRYAHANHTPLLIEATS
+ NQVDQFGGYTGMTPADFRDFVCQLADSLGFPQSELILGGDHLGPNRWQNLPATQAMAN
+ ADDLIKSYVAAGFKKIHLDCSMSCADDPVPLTDEIVAERAARLAKVAEETCQQHFGKS
+ DLVYVIGTEVPVPGGAHETLTELEVTTPEAARATLEAHRYAFEKQGLDAIWPRINALV
+ VQPGVEFDHTQIIDYQPQKATELSKMVETYDMLVFEAHSTDYQTPQSLRQLVKDHFAI
+ LKVGPALTFALREALFSLAAIEEELLPAKACSGLRHVLESVMLDRPEYWQNHYHGDGN
+ ARRLARGYSYSDRVRYYWPDSQIDDAFERLVRNLADEPIPLPLISQYLPLQYVKVREG
+ DLNATPRELIISHIQDILQQYHAACYGTTFYNE"
+ misc_feature complement(4284614..4285873)
+ /locus_tag="SARI_04364"
+ /note="tagatose 6-phosphate aldolase subunit KbaZ;
+ Provisional; Region: PRK15458"
+ /db_xref="CDD:185355"
+ gene 4286137..4286946
+ /locus_tag="SARI_04365"
+ CDS 4286137..4286946
+ /locus_tag="SARI_04365"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR001034"
+ /inference="protein motif:HMMSmart:IPR001034"
+ /inference="protein motif:ScanRegExp:IPR001034"
+ /inference="similar to AA sequence:INSD:BAE77178.1"
+ /note="transcriptional repressor for the agaZVWA and
+ agaSYBCDI operons"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional regulator AgaR"
+ /protein_id="YP_001573286.1"
+ /db_xref="GI:161506174"
+ /db_xref="InterPro:IPR001034"
+ /db_xref="InterPro:IPR011991"
+ /translation="MGHTDSSADKRVTGTSERRELIIQRLRQQGSVQVSDLSVLFGVS
+ TVTIRNDLAFLEKQGIAVRAYGGALICDSNTSCMEPSVEDKSSLNTALKRSIARAAVE
+ LIKPGHRVILDSGTTTYEIARLMRKHTDVIAMTNGMNVANALLEAEGVELLMTGGHLR
+ RQSLSFYGDQAEHSLQNYHFDMLFLGVDAIDLERGISTHNEDEARLNRRMCEVAEKII
+ VVTDSSKFDRSSLHKIVDTQRIDMIIVDECIPVESLEGLRKSGIDVILVKI"
+ misc_feature 4286137..4286940
+ /locus_tag="SARI_04365"
+ /note="DNA-binding transcriptional regulator AgaR;
+ Provisional; Region: PRK09802"
+ /db_xref="CDD:182086"
+ misc_feature <4286224..4286355
+ /locus_tag="SARI_04365"
+ /note="DeoR-like helix-turn-helix domain; Region:
+ HTH_DeoR; pfam08220"
+ /db_xref="CDD:116806"
+ misc_feature 4286395..4286880
+ /locus_tag="SARI_04365"
+ /note="DeoR C terminal sensor domain; Region: DeoRC;
+ pfam00455"
+ /db_xref="CDD:201239"
+ gene complement(4287056..4288627)
+ /locus_tag="SARI_04366"
+ CDS complement(4287056..4288627)
+ /locus_tag="SARI_04366"
+ /inference="protein motif:HMMPfam:IPR007392"
+ /inference="protein motif:HMMPfam:IPR013974"
+ /inference="similar to AA sequence:INSD:AAL22122.1"
+ /note="'KEGG: stm:STM3250 2.2e-278 garD; galactarate
+ dehydrogenase K01708;
+ COG: COG2721 Altronate dehydratase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573287.1"
+ /db_xref="GI:161506175"
+ /db_xref="InterPro:IPR007392"
+ /db_xref="InterPro:IPR013974"
+ /translation="MANIEIRQKSPSAFYIKVHETDNVAIIVNDYGLKAGTRFPDGLE
+ LTEHIPQGHKVALTDIPAHGEIVRYGEVIGYAVRDIPRGSWIDESLVELPKAPPLNTL
+ PLATKVPEPLPPLEGYTFEGYRNADGSVGTKNLLGITTSVHCVAGVVDYVVKVIERDL
+ LPRYPNVDGVVGLNHLYGCGVAINAPAAVVPIRTIHNIALNPNFGGEVMVIGLGCEKL
+ QPERLLEGTGDIPAITVESASIVRLQDEQHVGFKSMVDEILQVAERHLAKLNQRQRET
+ CPASELVVGMQCGGSDAFSGVTANPAVGYASDLLVRCGATVMFSEVTEVRDAIHLLTP
+ RAINEAVGKRLLDEMAWYDNYLDMGKTDRSANPSPGNKKGGLANVVEKALGSIAKSGK
+ SAIVEVLSPGQRPTKRGLIYAATPASDFVCGTQQVASGITVQVFTTGRGTPYGLMAVP
+ VIKMATRTELANRWYDLMDINAGTIATGEETIEDVGWKLFHFILDVASGRKKTFSDQW
+ GLHNQLAVFNPAPVT"
+ misc_feature complement(4287059..4288585)
+ /locus_tag="SARI_04366"
+ /note="galactarate dehydratase; Region: galactar-dH20;
+ TIGR03248"
+ /db_xref="CDD:188300"
+ misc_feature complement(4288370..4288585)
+ /locus_tag="SARI_04366"
+ /note="Domains similar to fish antifreeze type III
+ protein; Region: SAF_AH_GD; cd11613"
+ /db_xref="CDD:212158"
+ misc_feature complement(4287059..4288282)
+ /locus_tag="SARI_04366"
+ /note="D-galactarate dehydratase / Altronate hydrolase, C
+ terminus; Region: GD_AH_C; pfam04295"
+ /db_xref="CDD:218011"
+ gene 4288901..4289065
+ /locus_tag="SARI_04367"
+ CDS 4288901..4289065
+ /locus_tag="SARI_04367"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573288.1"
+ /db_xref="GI:161506176"
+ /translation="MIIRTILFILNSEYSVSDGLLENTIIIKDDKNIRVVYCDTECIT
+ AMKIECGEPF"
+ gene 4289156..4289926
+ /locus_tag="SARI_04368"
+ CDS 4289156..4289926
+ /locus_tag="SARI_04368"
+ /inference="protein motif:BlastProDom:IPR001697"
+ /inference="protein motif:HMMPfam:IPR005000"
+ /inference="similar to AA sequence:INSD:AAO70708.1"
+ /note="cleaves 5-dehydro-4-deoxy-glucarate and
+ 2-dehydro-3-deoxy-D-glucarate"
+ /codon_start=1
+ /transl_table=11
+ /product="alpha-dehydro-beta-deoxy-D-glucarate aldolase"
+ /protein_id="YP_001573289.1"
+ /db_xref="GI:161506177"
+ /db_xref="InterPro:IPR001697"
+ /db_xref="InterPro:IPR005000"
+ /translation="MNNAIFPNKFKVALAAQQVQIGCWSALASPITTEVLGLAGFDWL
+ VLDGEHAPNDVTTLIPQLMALKGSASAPVVRVPTNEPVIIKRMLDIGFYNFLIPFVET
+ QEEAARAVASTRYPPEGIRGVSVSHRANMFGTVPDYFAQSNKNITIIVQIESQLGVDN
+ VDAIAATEGVDGIFVGPSDLAAAMGHLGNASHPDVQQTIQHIFARAKAHGKPCGILAP
+ VEADARRYLEWGATFVAVGSDLGVFRAGTQKLADTFKK"
+ misc_feature 4289156..4289923
+ /locus_tag="SARI_04368"
+ /note="alpha-dehydro-beta-deoxy-D-glucarate aldolase;
+ Provisional; Region: PRK10558"
+ /db_xref="CDD:182547"
+ gene 4289934..4290842
+ /gene="garR"
+ /locus_tag="SARI_04369"
+ CDS 4289934..4290842
+ /gene="garR"
+ /locus_tag="SARI_04369"
+ /inference="protein motif:HMMPfam:IPR006115"
+ /inference="protein motif:HMMPIR:IPR002204"
+ /inference="protein motif:HMMTigr:IPR006398"
+ /inference="protein motif:ScanRegExp:IPR002204"
+ /inference="protein motif:superfamily:IPR008927"
+ /inference="similar to AA sequence:REFSEQ:NP_462161.1"
+ /note="catalyzes the reduction of tartronate semialdehyde
+ to glycerate"
+ /codon_start=1
+ /transl_table=11
+ /product="tartronate semialdehyde reductase"
+ /protein_id="YP_001573290.1"
+ /db_xref="GI:161506178"
+ /db_xref="InterPro:IPR002204"
+ /db_xref="InterPro:IPR006115"
+ /db_xref="InterPro:IPR006398"
+ /db_xref="InterPro:IPR008927"
+ /translation="MKRENVMTMKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAI
+ ADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMS
+ SIAPLASREISEALKARGIEMLDAPVSGGEPKAIDGTLSVMVGGDKTIFDKYYDLMKA
+ MAGSVVHTGDIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLA
+ GSTVLDAKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQLPLTAAVMEMMQALR
+ ADGHGNDDHSALACYYEKLAKVEVIR"
+ misc_feature 4289952..4290839
+ /gene="garR"
+ /locus_tag="SARI_04369"
+ /note="tartronate semialdehyde reductase; Provisional;
+ Region: garR; PRK11559"
+ /db_xref="CDD:183197"
+ misc_feature 4289958..>4290467
+ /gene="garR"
+ /locus_tag="SARI_04369"
+ /note="6-phosphogluconate dehydrogenase-like protein;
+ Reviewed; Region: PRK09599"
+ /db_xref="CDD:236582"
+ gene 4290940..4292085
+ /locus_tag="SARI_04370"
+ CDS 4290940..4292085
+ /locus_tag="SARI_04370"
+ /inference="protein motif:HMMPanther:IPR004381"
+ /inference="protein motif:HMMPfam:IPR004381"
+ /inference="protein motif:HMMTigr:IPR004381"
+ /inference="similar to AA sequence:REFSEQ:NP_462160.1"
+ /note="'KEGG: stm:STM3247 1.3e-191 garK; glycerate kinase
+ K00865;
+ COG: COG1929 Glycerate kinase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="glycerate kinase I"
+ /protein_id="YP_001573291.1"
+ /db_xref="GI:161506179"
+ /db_xref="InterPro:IPR004381"
+ /translation="MKIVIAPDSYKESLSAAEVAQAIEKGFREIFPDAQYVSVPVADG
+ GEGTVEAMIAATQGAERAAWVTGPLGEKVKACWGMSGDGHTAFIEMAAASGLALVPPE
+ RRNPLITTSRGTGELILQALESGARNIIIGIGGSATNDGGAGMMQALGAKLRDANGAD
+ IGYGGGSLHCLSDIDISELDPRLKLCAIRVACDVSNPLIGDNGASRIFGPQKGATEEN
+ ILELDRNLAHYADIIKKSLNVDVKAVPGTGAAGGMGAALIAFLGAELRSGIEIVTAAL
+ NLEEHIHDCTLVVTGEGRIDSQSIRGKVPVGVASVAKKYHKPVIGIAGSLTHDVGIVH
+ QYGIDAAFSVLTRIVTLEEAFRSAFDNIYRASRNVAAALAIGMRSTG"
+ misc_feature 4290940..4292082
+ /locus_tag="SARI_04370"
+ /note="glycerate kinase I; Provisional; Region: PRK10342"
+ /db_xref="CDD:182392"
+ gene 4292179..4292479
+ /locus_tag="SARI_04371"
+ ncRNA 4292179..4292479
+ /locus_tag="SARI_04371"
+ /ncRNA_class="RNase_P_RNA"
+ /product="RNA component of RNase P"
+ /inference="nucleotide motif:Rfam:RF00010"
+ /note="Rfam score 222.4"
+ gene 4292534..4292785
+ /locus_tag="SARI_04372"
+ CDS 4292534..4292785
+ /locus_tag="SARI_04372"
+ /inference="similar to AA sequence:REFSEQ:YP_218179.1"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573292.1"
+ /db_xref="GI:161506180"
+ /translation="MLLQGDRMNDCPRRYTQKKAAYRSVSPLHKTRFGGFLLIRPVKG
+ IEVAEDASVTIRQLIDSRGDIILFVFVMRNTKRYRLRSF"
+ gene complement(4293003..4293137)
+ /locus_tag="SARI_04373"
+ CDS complement(4293003..4293137)
+ /locus_tag="SARI_04373"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573293.1"
+ /db_xref="GI:161506181"
+ /translation="MAEITIYYGDNHPISPPYFQHLMKTIFQAITGYFIDNSNVKFKA
+ "
+ gene 4293327..4294265
+ /locus_tag="SARI_04374"
+ CDS 4293327..4294265
+ /locus_tag="SARI_04374"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="protein motif:HMMPfam:IPR005119"
+ /inference="similar to AA sequence:REFSEQ:NP_457632.1"
+ /note="regulates the tdcABCDEFG operon which is involved
+ in amino acid degradation"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA-binding transcriptional activator TdcA"
+ /protein_id="YP_001573294.1"
+ /db_xref="GI:161506182"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR005119"
+ /db_xref="InterPro:IPR011991"
+ /translation="MNTLVLPKTQHLVVFQEVIKSGSIGSAAKSLGLTQPAVSKIISD
+ VEAYFGVELIVRKNTGVTLTEAGQVLLSWSKSITREMKNMINEMNSMTCNTVVDVSFG
+ FPSLIGFTFMSDMIHKFKEVFPKAQVSMYEAQLSSFLPALRDGRLDFAIGTLSSEMQL
+ QDLHVEPLFESEFVLVASKSRTCTGTITLESLKDEQWVLPQTNMGYYSELLTTLQRNG
+ INIENIVKTDSVVTIYNLVLNADFLTVIPCDMTTPFGSNQFITIPIKDTLPVARYAAV
+ WSKNYRIKKAASVLVELAKQYSSYNGCRRRQLIEIE"
+ misc_feature 4293327..4294262
+ /locus_tag="SARI_04374"
+ /note="DNA-binding transcriptional activator TdcA;
+ Provisional; Region: PRK10341"
+ /db_xref="CDD:182391"
+ misc_feature 4293354..4293530
+ /locus_tag="SARI_04374"
+ /note="Bacterial regulatory helix-turn-helix protein, lysR
+ family; Region: HTH_1; pfam00126"
+ /db_xref="CDD:215735"
+ misc_feature 4293621..4294217
+ /locus_tag="SARI_04374"
+ /note="The C-terminal substrate binding domain of
+ LysR-type transcriptional regulator TdcA, which is
+ involved in the degradation of L-serine and L-threonine,
+ contains the type 2 periplasmic binding fold; Region:
+ PBP2_TdcA; cd08418"
+ /db_xref="CDD:176110"
+ misc_feature order(4293636..4293638,4293642..4293647,4293657..4293659,
+ 4293837..4293839,4293945..4293947,4294143..4294145)
+ /locus_tag="SARI_04374"
+ /note="putative substrate binding pocket [chemical
+ binding]; other site"
+ /db_xref="CDD:176110"
+ misc_feature order(4293639..4293641,4293648..4293653,4293660..4293665,
+ 4293672..4293677,4293681..4293686,4293693..4293698,
+ 4293702..4293716,4293720..4293722,4293912..4293914,
+ 4293996..4294010,4294017..4294022,4294029..4294034,
+ 4294041..4294043,4294083..4294085)
+ /locus_tag="SARI_04374"
+ /note="putative dimerization interface [polypeptide
+ binding]; other site"
+ /db_xref="CDD:176110"
+ gene 4294361..4295350
+ /locus_tag="SARI_04375"
+ CDS 4294361..4295350
+ /locus_tag="SARI_04375"
+ /inference="protein motif:HMMPfam:IPR001926"
+ /inference="protein motif:ScanRegExp:IPR000634"
+ /inference="similar to AA sequence:SwissProt:P11954"
+ /note="catalyzes the formation of 2-oxobutanoate from
+ L-threonine; catabolic"
+ /codon_start=1
+ /transl_table=11
+ /product="threonine dehydratase"
+ /protein_id="YP_001573295.1"
+ /db_xref="GI:161506183"
+ /db_xref="InterPro:IPR000634"
+ /db_xref="InterPro:IPR001926"
+ /translation="MHITYDLPVAIEDILDAKKRLAGKIYKTGMPRSNYFSERCKGEI
+ FLKFENMQRTGSFKIRGAFNKLSSLTEAEKRKGVVACSAGNHAQGVSLSCAMLGIDGK
+ VVMPKGAPKSKVAATCDYSAEVVLHGDNFNDTIAKVSEIVETEGRIFIPPYDDPKVIA
+ GQGTIGLEIMEDLYDVDNVIVPVGGGGLIAGIAIAIKSINPTINVIGVQSENVHGMAA
+ SYYAGEITTHRTTGTLADGCDVSRPGNLTYEIVRELVDDIVLVSEDEIRNSMIALIQR
+ NKVITEGAGALACAALLSGKLDSHIQNRKTVSIISGGNIDLSRVSQITGLVDA"
+ misc_feature 4294370..4295329
+ /locus_tag="SARI_04375"
+ /note="Threonine dehydratase [Amino acid transport and
+ metabolism]; Region: IlvA; COG1171"
+ /db_xref="CDD:224092"
+ misc_feature 4294391..4295308
+ /locus_tag="SARI_04375"
+ /note="Threonine dehydratase: The first step in amino acid
+ degradation is the removal of nitrogen. Although the
+ nitrogen atoms of most amino acids are transferred to
+ alpha-ketoglutarate before removal, the alpha-amino group
+ of threonine can be directly...; Region: Thr-dehyd;
+ cd01562"
+ /db_xref="CDD:107205"
+ misc_feature order(4294391..4294396,4294403..4294405,4294412..4294417,
+ 4294508..4294513,4294949..4294954,4295159..4295161,
+ 4295168..4295173,4295180..4295182,4295192..4295200,
+ 4295297..4295308)
+ /locus_tag="SARI_04375"
+ /note="tetramer interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:107205"
+ misc_feature order(4294532..4294534,4294613..4294615,4294910..4294924,
+ 4295291..4295293)
+ /locus_tag="SARI_04375"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:107205"
+ misc_feature 4294532..4294534
+ /locus_tag="SARI_04375"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:107205"
+ gene 4295371..4296702
+ /locus_tag="SARI_04376"
+ CDS 4295371..4296702
+ /locus_tag="SARI_04376"
+ /inference="protein motif:HMMPfam:IPR013057"
+ /inference="protein motif:HMMTigr:IPR004694"
+ /inference="similar to AA sequence:INSD:AAX67095.1"
+ /note="involved in the import of threonine and serine in
+ combination with the import of a proton"
+ /codon_start=1
+ /transl_table=11
+ /product="threonine/serine transporter TdcC"
+ /protein_id="YP_001573296.1"
+ /db_xref="GI:161506184"
+ /db_xref="InterPro:IPR004694"
+ /db_xref="InterPro:IPR013057"
+ /translation="MSTTDSIVSSQTKQSSWRKSDTTWTLGLFGTAIGAGVLFFPIRA
+ GFGGLIPILLMLVLAYPIAFYCHRALARLCLSGSNPSGNITETVEEHFGKTGGVVITF
+ LYFFAICPLLWIYGVTITNTFMTFWENQLQMPALNRGVVALFLLLLMAFVIWFGKDLM
+ VKVMSYLVWPFIASLVLISLSLIPYWNSAVIDQVDLSNIALTGHDGILVTVWLGISIM
+ VFSFNFSPIVSSFVVSKREEYEKEFGRDFTERKCSQIISRASMLMVAVVMFFAFSCLF
+ TLSPQNMADAKAQNIPVLSYLANHFASLSGTKSTFATVLEYGASIIALVAIFKSFFGH
+ YLGTLEGLNGLVLKFGYKGDKTKVSMGKLNTISMIFIMGSTWIVAYANPNILDLIEAM
+ GAPIIASLLCLLPMYAIRKAPSLAKYRGRLDNVFVTLIGLLTILNIVYKLF"
+ misc_feature 4295371..4296699
+ /locus_tag="SARI_04376"
+ /note="threonine/serine transporter TdcC; Provisional;
+ Region: PRK13629"
+ /db_xref="CDD:184191"
+ misc_feature 4295404..4296690
+ /locus_tag="SARI_04376"
+ /note="Amino acid permeases [Amino acid transport and
+ metabolism]; Region: SdaC; COG0814"
+ /db_xref="CDD:223884"
+ gene 4296769..4297977
+ /locus_tag="SARI_04377"
+ CDS 4296769..4297977
+ /locus_tag="SARI_04377"
+ /inference="protein motif:HMMPanther:IPR000890"
+ /inference="protein motif:HMMPfam:IPR000890"
+ /inference="protein motif:HMMPIR:IPR004372"
+ /inference="protein motif:HMMTigr:IPR004372"
+ /inference="protein motif:ScanRegExp:IPR000890"
+ /inference="similar to AA sequence:REFSEQ:YP_218175.1"
+ /note="catalyzes the formation of propanoyl phosphate from
+ propanoate and ATP; TdcD also has acetate kinase
+ activities and functions in anaerobic threonine
+ catabolism"
+ /codon_start=1
+ /transl_table=11
+ /product="propionate/acetate kinase"
+ /protein_id="YP_001573297.1"
+ /db_xref="GI:161506185"
+ /db_xref="InterPro:IPR000890"
+ /db_xref="InterPro:IPR004372"
+ /translation="MNEFPVVLVINCGSSSIKFSVLDVATCDLLIAGIADGINTENAF
+ LSINGDKPLNLAHPNYEGALQAIAFELEKRDLTDSVALIGHRIAHGGDLFTQSVIITD
+ EVIDNIRQVSPLAPLHNYANLSGIDAARHLFPGVRQVAVFDTSFHQTLAPEAYLYGLP
+ WDYFARLGVRRYGFHGTSHRYVSQRAHELLGLDEKNSGLIVAHLGNGASICAVRNGQS
+ VDTSMGMTPLEGLMMGTRSGDVDFGAMAWVANETGQTLSDLERVVNKESGLLGISGLS
+ SDLRVLEKAWHEGHERARLAIKTFVHRIARHIAGHAASLHRLDGIIFTGGIGENSVLI
+ RQLVIEHLGVLGLTLDVEMNKQPNYHGERIISANPSQVICAVIPTNEEKMIALDAIHL
+ GNVKAPVEFA"
+ misc_feature 4296769..4297956
+ /locus_tag="SARI_04377"
+ /note="propionate/acetate kinase; Provisional; Region:
+ PRK12379"
+ /db_xref="CDD:183484"
+ misc_feature 4296781..4297956
+ /locus_tag="SARI_04377"
+ /note="Acetate kinase [Energy production and conversion];
+ Region: ackA; COG0282"
+ /db_xref="CDD:223359"
+ gene 4298011..4300305
+ /locus_tag="SARI_04378"
+ CDS 4298011..4300305
+ /locus_tag="SARI_04378"
+ /inference="protein motif:HMMPfam:IPR001150"
+ /inference="protein motif:HMMPfam:IPR004184"
+ /inference="protein motif:HMMTigr:IPR005949"
+ /inference="protein motif:ScanRegExp:IPR001150"
+ /note="'KEGG: stm:STM3241 0. tdcE; pyruvate formate-lyase
+ 4/2-ketobutyrate formate-lyase K00656;
+ COG: COG1882 Pyruvate-formate lyase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573298.1"
+ /db_xref="GI:161506186"
+ /db_xref="InterPro:IPR001150"
+ /db_xref="InterPro:IPR004184"
+ /db_xref="InterPro:IPR005949"
+ /translation="MKVNIDTSDMLYAEAWRDFKGTDWKEEINVRDFIQHNYTPYEGD
+ ESFLADATPATTALWEKVMAGIRIENATHAPVDFDTNIATTITAHDAGYIEKDLEKIV
+ GLQTDKPLKRALHPFGGVNMIKSSFHAYGREMDADFEYTFTDLRKTHNQGVFDVYSPD
+ MLRCRKSGVLTGLPDGYGRGRIIGDYRRVALYGIRYLVRERELQFADLQSNLEWGQNL
+ EATLRLREELAEHRRALLQMQEMAAKYGYDISRPARNAQEAVQWLYFAYLAAVKSQNG
+ GAMSLGRTASFLDIYIERDFNAGLLTEQQAQELIDHFIMKIRMVRFLRTPEFDSLFSG
+ DPIWATEVIGGMGLDGRTLVTKNAFRYLHTLHTMGPAPEPNLTILWSEALPVAFKKYA
+ AQVSIVTSSLQYENDDLMRTDFNSDDYAIACCVSPMVIGKQMQFFGARANLAKTLLYA
+ INGGVDEKLKIQVGPKTAPLTDEVLDYDAVMESLDHFMDWLAVQYISALNIIHYMHDK
+ YSYEASLMALHDRDVYRTMACGIAGLSVAADSLSAIKYARVKPIRDENGLAIDFAIEG
+ EYPQYGNNDERVDSIACDLVKRFMQKISVLPTYRHAVPTQSILTITSNVVYGQKTGNT
+ PDGRRAGTLFAPGANPMHGRDRKGAVASLTSVAKLPFTYAKDGISYTFSIVPAALGKE
+ DDVRKTNLVGLLDGYFHHEAQVEGGQHLNVNVMNREMLLDAIEHPENYPNLTIRVSGY
+ AVRFNALTREQQQDVISRTFTQAM"
+ misc_feature 4298053..4300302
+ /locus_tag="SARI_04378"
+ /note="formate acetyltransferase 1; Region: pyr_form_ly_1;
+ TIGR01255"
+ /db_xref="CDD:233331"
+ misc_feature 4298053..4300290
+ /locus_tag="SARI_04378"
+ /note="Pyruvate formate lyase 1; Region: PFL1; cd01678"
+ /db_xref="CDD:153087"
+ misc_feature order(4298371..4298376,4298458..4298463,4298470..4298475,
+ 4298479..4298481,4298494..4298496,4298503..4298508)
+ /locus_tag="SARI_04378"
+ /note="coenzyme A binding site [chemical binding]; other
+ site"
+ /db_xref="CDD:153087"
+ misc_feature order(4298551..4298553,4298839..4298844,4299004..4299006,
+ 4299022..4299024,4299277..4299279,4299319..4299321,
+ 4299328..4299330,4299835..4299837,4299841..4299843)
+ /locus_tag="SARI_04378"
+ /note="active site"
+ /db_xref="CDD:153087"
+ misc_feature order(4299277..4299282,4300225..4300227)
+ /locus_tag="SARI_04378"
+ /note="catalytic residues [active]"
+ /db_xref="CDD:153087"
+ misc_feature 4300216..4300230
+ /locus_tag="SARI_04378"
+ /note="glycine loop; other site"
+ /db_xref="CDD:153087"
+ gene 4300375..4301739
+ /locus_tag="SARI_04379"
+ CDS 4300375..4301739
+ /locus_tag="SARI_04379"
+ /inference="protein motif:HMMPfam:IPR005130"
+ /inference="protein motif:HMMPfam:IPR005131"
+ /inference="protein motif:HMMTigr:IPR004644"
+ /inference="similar to AA sequence:INSD:AAL22113.1"
+ /note="'KEGG: spt:SPA3109 1.4e-230 tdcG; L-serine
+ dehydratase K01752;
+ COG: COG1760 L-serine deaminase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573299.1"
+ /db_xref="GI:161506187"
+ /db_xref="InterPro:IPR004644"
+ /db_xref="InterPro:IPR005130"
+ /db_xref="InterPro:IPR005131"
+ /translation="MISAFDIFKIGIGPSSSHTVGPMNAGKCFIDRLAGSGDLPRTTH
+ IKVDLYGSLSLTGKGHATDSAIMMGLAGNTPQDVNIDSIPAFIQEVARSSRLPVAGGA
+ HVVDFPVADSILFHTETLARHENGMCITAWNGQMPLLHKTYYSIGGGFIVEEERFGQS
+ HDVEKSVPYDFHSASKLLSLCERHGLSVSGLMMKNELALRSKEQIDAGFARIWQVMAA
+ GIERGMNTEGVLPGPLNVPRRAVALRRLLVSSDNLSRDPMNVIDWINMFALAVSEENA
+ AGGRVVTAPTNGACGIIPAVLAYYDKFRRPVNANSIARYLLAAGAIGALYKMNASISG
+ AEVGCQGEVGVACSMAAAGLTELLGGSPAQVCIAAEIAMEHNLGLTCDPVAGQVQIPC
+ IERNAINAVKAVNAARMALRRTSEPRVSLDKVIETMYETGKDMNDKYRETSRGGLAIK
+ VVCR"
+ misc_feature 4300375..4301733
+ /locus_tag="SARI_04379"
+ /note="L-serine dehydratase TdcG; Provisional; Region:
+ PRK15040"
+ /db_xref="CDD:185000"
+ misc_feature 4300381..4300851
+ /locus_tag="SARI_04379"
+ /note="Serine dehydratase beta chain; Region: SDH_beta;
+ pfam03315"
+ /db_xref="CDD:217489"
+ misc_feature 4300918..4301724
+ /locus_tag="SARI_04379"
+ /note="Serine dehydratase alpha chain; Region: SDH_alpha;
+ pfam03313"
+ /db_xref="CDD:217488"
+ gene 4302055..4303386
+ /locus_tag="SARI_04380"
+ CDS 4302055..4303386
+ /locus_tag="SARI_04380"
+ /inference="protein motif:HMMTigr:IPR004694"
+ /inference="similar to AA sequence:REFSEQ:YP_218172.1"
+ /note="'COG: COG0814 Amino acid permeases;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573300.1"
+ /db_xref="GI:161506188"
+ /db_xref="InterPro:IPR004694"
+ /translation="MESASNTSVILDASAPARRAGMTESEWREAIKFDSTDTGWVIMS
+ IGMAIGAGIVFLPVQVGLMGLWVFLLSSIIGYPAMYLFQRLFINTLAESPECKDYPSV
+ ISGYLGKNWGILLGALYFVMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGL
+ VLICILVAISSRGEKLLFKISTGMVLTKLLVVAALGVSMVGMWHLYNIGALPPMALLV
+ KNAIITLPFTLTSILFIQTLSPMVISYRSREKSIEVARHKALRAMNIAFGILFVTVFF
+ YAVSFTLAMGHDEAVKAYEQNISALAIAAQFISGDGAGWVKVVSVILNIFAVMTAFFG
+ VYLGFREATQGIVMNILRRKMPAEKINENLVQRGIMLFAILLAWSAIVLNAPVLSFTS
+ ICSPIFGMVGCLIPAWLVWKVPALHKYKGASLYLIIITGLLLCVSPFLAFS"
+ misc_feature 4302133..4303377
+ /locus_tag="SARI_04380"
+ /note="Amino acid permeases [Amino acid transport and
+ metabolism]; Region: SdaC; COG0814"
+ /db_xref="CDD:223884"
+ misc_feature 4302151..4303353
+ /locus_tag="SARI_04380"
+ /note="serine transporter; Region: stp; TIGR00814"
+ /db_xref="CDD:233139"
+ gene 4303412..4304722
+ /locus_tag="SARI_04381"
+ CDS 4303412..4304722
+ /locus_tag="SARI_04381"
+ /inference="protein motif:HMMPfam:IPR010469"
+ /inference="similar to AA sequence:INSD:AAL22111.1"
+ /note="'COG: COG3681 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573301.1"
+ /db_xref="GI:161506189"
+ /db_xref="InterPro:IPR010469"
+ /translation="MFESKINPLWQRLILAVQEEVKPALGCTEPISLALAAAAAAAEL
+ DGTVERIDAWVSPNLMKNGMGVTVPGTGMVGLPIAAALGALGGDAKAGLEVLKDASAK
+ AVADAKALLAAGHVAVMLQEPCNDILFSRAKVYSGDSWACVTIVGDHTNIVRIETDKG
+ VVFTQADNAQEEEKASPLVVLSHTSLEEILAFVNAVPFDAIRFILDAARLNGALSQEG
+ LRGSWGLHIGSTLAKQCDRGLLAKDLSTSILIRTSAASDARMGGATLPAMSNSGSGNQ
+ GITATVPVMVVAEHVGADDERLARALMLSHLSAIYIHHQLPRLSALCAATTAAMGAAA
+ GMAWLIDGRYATIAMAISSMIGDVSGMICDGASNSCAMKVSTSASAAWKAVLMALDDT
+ AVTGNEGIVAHNVEESISNLCSLACRSMQQTDKQIIEIMASKAH"
+ misc_feature 4303412..4304716
+ /locus_tag="SARI_04381"
+ /note="L-cysteine desulfidase [Amino acid transport and
+ metabolism]; Region: COG3681"
+ /db_xref="CDD:226206"
+ gene complement(4304797..4304961)
+ /locus_tag="SARI_04382"
+ CDS complement(4304797..4304961)
+ /locus_tag="SARI_04382"
+ /inference="similar to AA sequence:REFSEQ:YP_218170.1"
+ /note="'COG: NOG18539 non supervised orthologous group;
+ Psort location: mitochondrial, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573302.1"
+ /db_xref="GI:161506190"
+ /translation="MSKKSAKKRQSVVKPAVQKAMRATVHLGYEEMLTELEAIVADAE
+ VRLAEEKAAA"
+ gene complement(4304985..4305686)
+ /locus_tag="SARI_04383"
+ CDS complement(4304985..4305686)
+ /locus_tag="SARI_04383"
+ /inference="protein motif:HMMPanther:IPR012093"
+ /inference="protein motif:HMMPfam:IPR003829"
+ /inference="protein motif:HMMPIR:IPR012093"
+ /inference="protein motif:superfamily:IPR011051"
+ /inference="similar to AA sequence:INSD:CAD07760.1"
+ /note="'COG: COG1741 Pirin-related protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573303.1"
+ /db_xref="GI:161506191"
+ /db_xref="InterPro:IPR003829"
+ /db_xref="InterPro:IPR011051"
+ /db_xref="InterPro:IPR012093"
+ /translation="MITTRTAKQCGQADYGWLQARYTFSFGHYFDPTLLGYASLRVLN
+ QEVLAPGASFQPRTYPKVDILNLILDGEAEYRDSDGNHVQAKAGEALLLAAQPGISYS
+ ERNLSNVKPLTRMQLWLDACPEQENALVQKTTLSAAQQQLLASPDGEQNSLQLRQQVW
+ LHHITLEKGESLNFQLHGPRAYLQSIHGTFHAVTHNEEQEVLTCGDGAFIRDEPNITL
+ VANTPLRALLVDLPV"
+ misc_feature complement(4304988..4305686)
+ /locus_tag="SARI_04383"
+ /note="Pirin-related protein [General function prediction
+ only]; Region: COG1741"
+ /db_xref="CDD:224655"
+ misc_feature complement(4305330..4305680)
+ /locus_tag="SARI_04383"
+ /note="Pirin; Region: Pirin; pfam02678"
+ /db_xref="CDD:217181"
+ gene 4305791..4306687
+ /locus_tag="SARI_04384"
+ CDS 4305791..4306687
+ /locus_tag="SARI_04384"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR000847"
+ /inference="protein motif:HMMPfam:IPR005119"
+ /inference="similar to AA sequence:INSD:AAV78937.1"
+ /note="'COG: COG0583 Transcriptional regulator;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573304.1"
+ /db_xref="GI:161506192"
+ /db_xref="InterPro:IPR000847"
+ /db_xref="InterPro:IPR005119"
+ /db_xref="InterPro:IPR011991"
+ /translation="MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQK
+ LEEELDVVLFDRSGHRTKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTLV
+ TEALVPTPAFFPLLDRLAAKANTQLSFITEVLAGAWERLEQGRADIVIAPDMHFRSSS
+ EINSRKLYTLMNVYVAAPDHPIHQEPEPLSEVTRVKYRGIAVADTARERPVLTVQLLD
+ KQPRLTVSTIEDKRQALLAGLGVATMPYSMVEQDIAEGRLRVVSPESTSEIDIIMAWR
+ RDSMGEAKAWCLREIPKLFAGK"
+ misc_feature 4305815..4305994
+ /locus_tag="SARI_04384"
+ /note="Bacterial regulatory helix-turn-helix protein, lysR
+ family; Region: HTH_1; pfam00126"
+ /db_xref="CDD:215735"
+ misc_feature 4305821..4306654
+ /locus_tag="SARI_04384"
+ /note="putative DNA-binding transcriptional regulator;
+ Provisional; Region: PRK11074"
+ /db_xref="CDD:182948"
+ misc_feature 4306085..4306663
+ /locus_tag="SARI_04384"
+ /note="The substrate binding domain of LysR-type
+ transcriptional regulators (LTTRs), a member of the type 2
+ periplasmic binding fold protein superfamily; Region:
+ PBP2_LTTR_substrate; cl11398"
+ /db_xref="CDD:245600"
+ misc_feature order(4306127..4306132,4306136..4306141,4306148..4306150,
+ 4306160..4306162,4306163..4306183,4306454..4306471,
+ 4306487..4306492,4306496..4306501)
+ /locus_tag="SARI_04384"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:176102"
+ gene complement(4306726..4307091)
+ /locus_tag="SARI_04385"
+ CDS complement(4306726..4307091)
+ /locus_tag="SARI_04385"
+ /inference="protein motif:HMMPfam:IPR008523"
+ /inference="similar to AA sequence:INSD:AAL22107.1"
+ /note="'COG: COG3152 Predicted membrane protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573305.1"
+ /db_xref="GI:161506193"
+ /db_xref="InterPro:IPR008523"
+ /translation="MDWYLNVLKNYLGFGGRARRKEYWMFILVNIIFTFVLGLLDAML
+ GWQRAGGEGVLTTIYGVLIFLPWWAVQFRRLHDTDRSAWWLLLLLIPIIGWLIIIAFN
+ CQNGTPGDNRFGPDPKRFS"
+ misc_feature complement(4306729..4307091)
+ /locus_tag="SARI_04385"
+ /note="Predicted membrane protein [Function unknown];
+ Region: COG3152"
+ /db_xref="CDD:225694"
+ gene 4307276..4307542
+ /locus_tag="SARI_04386"
+ CDS 4307276..4307542
+ /locus_tag="SARI_04386"
+ /inference="protein motif:HMMPfam:IPR002514"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:INSD:CAG74557.1"
+ /note="'COG: COG2801 Transposase and inactivated
+ derivatives;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573306.1"
+ /db_xref="GI:161506194"
+ /db_xref="InterPro:IPR002514"
+ /db_xref="InterPro:IPR009057"
+ /translation="MKKIRFTESQILRVLKEGEGGRHVKEVCRENGVSEASYDNWKSK
+ YGGMESPDIKRMKELEEENRRLKQMYASLSLDHEILKDVVAKKL"
+ misc_feature 4307279..4307488
+ /locus_tag="SARI_04386"
+ /note="Transposase; Region: HTH_Tnp_1; pfam01527"
+ /db_xref="CDD:201841"
+ gene 4307578..4308384
+ /locus_tag="SARI_04387"
+ CDS 4307578..4308384
+ /locus_tag="SARI_04387"
+ /inference="protein motif:HMMPfam:IPR001584"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:INSD:CAG74556.1"
+ /note="'KEGG: nwi:Nwi_1143 0.00018 helix-turn-helix,
+ fis-type K00986;
+ COG: COG2801 Transposase and inactivated derivatives;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573307.1"
+ /db_xref="GI:161506195"
+ /db_xref="InterPro:IPR001584"
+ /db_xref="InterPro:IPR012337"
+ /translation="MTEHQTSERRGCRIIGISRSLLHYRPNAERDIPVIEALQDLAHH
+ YPAYGFGLMFNKLRQAGLAWNKKRVYRIYCRLKLNLRRNGKKRLPNRNPQPLAVPINM
+ NHCWSVDFMSDALMDGRRFRLFNVVDDFNREALAVEVDLNIPAHRVVHVLERLSAERG
+ YPAFIRSDNGPELTAAVLSEWAEQHGVILDFIQPGKPMQNGFIERFNKTLRTEILDMY
+ LFRTLSEVRELTENRRTEYNEERPHSSPGGIPPVTYARQKLAGDSNWQWY"
+ misc_feature 4307650..4308351
+ /locus_tag="SARI_04387"
+ /note="insertion element IS2 transposase InsD;
+ Provisional; Region: PRK14702"
+ /db_xref="CDD:237792"
+ misc_feature 4307662..4307835
+ /locus_tag="SARI_04387"
+ /note="HTH-like domain; Region: HTH_21; pfam13276"
+ /db_xref="CDD:222019"
+ misc_feature 4307884..4308219
+ /locus_tag="SARI_04387"
+ /note="Integrase core domain; Region: rve; pfam00665"
+ /db_xref="CDD:216050"
+ misc_feature 4308130..4308330
+ /locus_tag="SARI_04387"
+ /note="Integrase core domain; Region: rve_3; pfam13683"
+ /db_xref="CDD:222316"
+ gene complement(4308448..4308750)
+ /locus_tag="SARI_04388"
+ CDS complement(4308448..4308750)
+ /locus_tag="SARI_04388"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573308.1"
+ /db_xref="GI:161506196"
+ /translation="MLLHFPEKNSQLASINQKSSGEVKSALENLNKSVDAQINNNPDR
+ KPFILELKKSWGEMIDKKCQLETVDSKGTDAETAEVSNCLIKSYQEERKYFDTMLP"
+ gene complement(4308807..4309253)
+ /locus_tag="SARI_04389"
+ CDS complement(4308807..4309253)
+ /locus_tag="SARI_04389"
+ /note="'Psort location: extracellular, including cell
+ wall, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573309.1"
+ /db_xref="GI:161506197"
+ /translation="MHHYKFFALAAMLLCGSSFASDEYFMCNTAKGTIKLDENKGVLR
+ YTLSKDRKTAFNYESKGNDYSGFKYNHYSRFQTDYFSVSFVNAEYKYTIFSNYEGESE
+ SRGVSVTNLNSKKESVYDCKSVSIDRLSDLSAKLACDKDSALGCEE"
+ gene complement(4309240..4311552)
+ /locus_tag="SARI_04390"
+ CDS complement(4309240..4311552)
+ /locus_tag="SARI_04390"
+ /inference="similar to AA sequence:INSD:AAL01553.1"
+ /note="'KEGG: syf:Synpcc7942_1085 0.00069 1,4-alpha-glucan
+ branching enzyme K00700;
+ COG: COG3409 Putative peptidoglycan-binding
+ domain-containing protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573310.1"
+ /db_xref="GI:161506198"
+ /translation="MINIRYPVRKADGRDYKNYDELLTDIRKNAHGWWLLGISHYWHG
+ GIHIGTSSSPASVLNQDTPEKSVPLQFMMDGEVVAWRVNRDYAAIECYQERPLRQSGT
+ FVLVKSVYKPDEQDESSWLTLYQLYMHIAPLSEFPKRPLYRVTQKGHGVRMRKHSRHD
+ DSREIVPDVLANKHGHARMLMQGETLTVLQQKSFLLELRPEPFALVQRLQDGKPAGDL
+ FWVSMRPEYLEPDGECYVCLPEWMHHALNHGVFDDVVVPSAPLKVTVKAGDPVGFLGA
+ QDLADEDNYPQIITTDYKAHIELLSLDEHVPDVVANVKGIKTGKQFIKLKLKRPLYLR
+ NGEDEESTFKQMSAITRADAGKIIPRDATYPFTDKNGVTYFQIRPHTWMHQDDVEQLS
+ QHDLAELNFHCIEAEHTTDFTRTLDERWVIDALKSISSHFDSEKGPASAQAKMFYDSL
+ IHNAENRRPPDPYPDKSLDELLFGALHTNQMNIPEYARRLIVKHDSDWHSTREDTRWS
+ SVFTVRDESPVVKMANGGFLDVTRWMDKVPPFASQRSVWHFHPLEFPEILRSAEFPKT
+ PVNGELTPIEFIHFYNGDKIDDTDYEEAAKELGCEVAAIKAVAKTENGPYGSYFKFED
+ NDDYVPAILFERHHFHKYTNGKYDQFEDISNPVAGGYGATSIQYAKLIKAYALDKKAA
+ LKSASWGKFQILASNYATSGYASPEDFVFALSKSEKNQLKAFVSFIKADRVLLRSIRT
+ KDWLSFAQRYNGPRQKGYDLKMERNYNASL"
+ misc_feature complement(4309252..4309755)
+ /locus_tag="SARI_04390"
+ /note="Protein of unknown function (DUF3380); Region:
+ DUF3380; pfam11860"
+ /db_xref="CDD:152296"
+ gene complement(4311681..4312412)
+ /locus_tag="SARI_04391"
+ CDS complement(4311681..4312412)
+ /locus_tag="SARI_04391"
+ /inference="protein motif:HMMPfam:IPR001584"
+ /inference="protein motif:superfamily:IPR012337"
+ /inference="similar to AA sequence:INSD:ABF02610.1"
+ /note="'KEGG: nwi:Nwi_0782 2.4e-11 integrase, catalytic
+ region K00986;
+ COG: COG2801 Transposase and inactivated derivatives;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573311.1"
+ /db_xref="GI:161506199"
+ /db_xref="InterPro:IPR001584"
+ /db_xref="InterPro:IPR012337"
+ /translation="MRSEQNLATDEACRDKGSGRVPEPAGTQRRGLYRIAQQAPATVQ
+ SGCANERWVTDITYIRTHEGWLYLAVVVDLFSRKIIGWSMQSRMTKDIVLNALLMAVW
+ RGNPQRKVLVHSDQGSQYTNHEWQSFLKSHGLDGSMSRRGNCHDNAVAESFFQLLKRE
+ RIKKKIYGTREEACSDIFDYIEMFYNSKRRHGSSNQMSPTEYENQYYQRLGSVWIIRS
+ DSDRPPTRALHSREFVKHGGYSLIL"
+ misc_feature complement(4311933..4312268)
+ /locus_tag="SARI_04391"
+ /note="Integrase core domain; Region: rve; pfam00665"
+ /db_xref="CDD:216050"
+ misc_feature complement(4311840..4312262)
+ /locus_tag="SARI_04391"
+ /note="DDE domain; Region: DDE_Tnp_IS240; pfam13610"
+ /db_xref="CDD:222261"
+ misc_feature complement(4311795..4311962)
+ /locus_tag="SARI_04391"
+ /note="Integrase core domain; Region: rve_2; pfam13333"
+ /db_xref="CDD:205513"
+ gene complement(4312253..4312642)
+ /locus_tag="SARI_04392"
+ CDS complement(4312253..4312642)
+ /locus_tag="SARI_04392"
+ /inference="similar to AA sequence:INSD:AAG53988.1"
+ /note="'COG: COG2801 Transposase and inactivated
+ derivatives;
+ Psort location: mitochondrial, score: 23;
+ ORF located using Blastx'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573312.1"
+ /db_xref="GI:161506200"
+ /translation="MRYAFIRDNSSCWPVRLLCRVLNVHPSGFYAWLQQPHSQRHQVD
+ RRLTGQIKQFWLESGCVYGYRKIYLDLRDSGQQCGVNRIWRLMKRVGIKAQVGYRSPR
+ ARKGEACIVSPNRPQRQFNPDARMSVG"
+ misc_feature complement(4312346..4312519)
+ /locus_tag="SARI_04392"
+ /note="HTH-like domain; Region: HTH_21; pfam13276"
+ /db_xref="CDD:222019"
+ gene complement(4312639..4312902)
+ /locus_tag="SARI_04393"
+ CDS complement(4312639..4312902)
+ /locus_tag="SARI_04393"
+ /inference="protein motif:HMMPfam:IPR002514"
+ /inference="protein motif:superfamily:IPR009057"
+ /inference="similar to AA sequence:INSD:AAG53987.1"
+ /note="'COG: COG2963 Transposase and inactivated
+ derivatives;
+ Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573313.1"
+ /db_xref="GI:161506201"
+ /db_xref="InterPro:IPR002514"
+ /db_xref="InterPro:IPR009057"
+ /translation="MSGKRYPEEFKIEAVKQVVDRGHSVSSVATRLDITTHSLYAWIK
+ KYGPYSSINKEQSDAQAGLRRLQKELKRVTDERDILNFAKLSD"
+ misc_feature complement(<4312663..4312902)
+ /locus_tag="SARI_04393"
+ /note="Transposase and inactivated derivatives [DNA
+ replication, recombination, and repair]; Region: COG2963"
+ /db_xref="CDD:225511"
+ misc_feature complement(4312687..4312893)
+ /locus_tag="SARI_04393"
+ /note="Transposase; Region: HTH_Tnp_1; pfam01527"
+ /db_xref="CDD:201841"
+ gene complement(4313000..4313485)
+ /locus_tag="SARI_04394"
+ CDS complement(4313000..4313485)
+ /locus_tag="SARI_04394"
+ /inference="protein motif:HMMPfam:IPR011637"
+ /inference="similar to AA sequence:REFSEQ:YP_152246.1"
+ /note="'KEGG: lpn:lpg0671 0.0076 ndh; NADH dehydrogenase
+ transmembrane protein K03885;
+ COG: COG2259 Predicted membrane protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573314.1"
+ /db_xref="GI:161506202"
+ /db_xref="InterPro:IPR011637"
+ /translation="MILSSDSNDALRRAIANENNSSSRSGLLESNMKKLEDVGVLIAR
+ ILMPVLFITAGWGKINGYAGTQQYMEAMGVPGFLLPLTILLEFGGGLAILLGFLTRTT
+ AFFTAGFTLLTAFIFHSNFAEGVNSLMFMKNLTIAGGFLLLALTGPGAFSLDRLLNRK
+ W"
+ misc_feature complement(4313003..4313392)
+ /locus_tag="SARI_04394"
+ /note="Predicted membrane protein [Function unknown];
+ Region: COG2259"
+ /db_xref="CDD:225168"
+ gene complement(4313533..4313688)
+ /locus_tag="SARI_04395"
+ CDS complement(4313533..4313688)
+ /locus_tag="SARI_04395"
+ /note="'Psort location: nuclear, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573315.1"
+ /db_xref="GI:161506203"
+ /translation="MAPGKKYSPSTATPQLTSFFYSIALSGYHPLISDSAILFRYITA
+ LSINQIF"
+ gene complement(4313640..4313939)
+ /locus_tag="SARI_04396"
+ CDS complement(4313640..4313939)
+ /locus_tag="SARI_04396"
+ /inference="similar to AA sequence:REFSEQ:NP_457620.1"
+ /note="'COG: NOG11454 non supervised orthologous group;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573316.1"
+ /db_xref="GI:161506204"
+ /translation="MSSKGEREKRKALLLSQIQQQRLDLAASRRDWLETTGAYDRGWN
+ TVLSLRSWALVGSSVMAIWTIRHPNMLVRWAKRGLGIWSAWRLVKNTLRQQQLRS"
+ misc_feature complement(4313682..4313900)
+ /locus_tag="SARI_04396"
+ /note="YqjK-like protein; Region: YqjK; pfam13997"
+ /db_xref="CDD:206167"
+ gene complement(4313936..4314334)
+ /locus_tag="SARI_04397"
+ CDS complement(4313936..4314334)
+ /locus_tag="SARI_04397"
+ /inference="protein motif:HMMPIR:IPR011309"
+ /inference="similar to AA sequence:INSD:AAL22103.1"
+ /note="'COG: COG5393 Predicted membrane protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573317.1"
+ /db_xref="GI:161506205"
+ /db_xref="InterPro:IPR011309"
+ /translation="MADSRQAQGPGKSVLGIGQRIVTIIVEMVETRLRLAVVELEEEK
+ ANLFQLLLMVGLTMLFAAFGLMSLMVLVIWAIDPQYRLNAMIATTVVLLVLALIGGIW
+ TLRKARQSTLLRHTRHELANDRQILEDDQS"
+ misc_feature complement(4313942..4314334)
+ /locus_tag="SARI_04397"
+ /note="Predicted membrane protein [Function unknown];
+ Region: COG5393"
+ /db_xref="CDD:227681"
+ gene complement(4314337..4314642)
+ /locus_tag="SARI_04398"
+ CDS complement(4314337..4314642)
+ /locus_tag="SARI_04398"
+ /inference="protein motif:HMMPfam:IPR010279"
+ /inference="similar to AA sequence:REFSEQ:NP_457618.1"
+ /note="'COG: COG4575 Uncharacterized conserved protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573318.1"
+ /db_xref="GI:161506206"
+ /db_xref="InterPro:IPR010279"
+ /translation="MSKDNTTEHLRAELKSLTDTLEEVLSSSGEKSKEELSKIRSKAE
+ RALKESRYRLGETGDVIANQTRVAAARADDYVRENPWTSVGIGAAVGLVLGVLLTRR"
+ misc_feature complement(4314394..4314642)
+ /locus_tag="SARI_04398"
+ /note="Uncharacterized conserved protein [Function
+ unknown]; Region: ElaB; COG4575"
+ /db_xref="CDD:226941"
+ gene complement(4314684..4315052)
+ /locus_tag="SARI_04399"
+ CDS complement(4314684..4315052)
+ /locus_tag="SARI_04399"
+ /inference="protein motif:HMMPfam:IPR009468"
+ /inference="similar to AA sequence:INSD:AAL22101.1"
+ /note="'KEGG: bli:BL03996 7.8e-05 atpF; ATP synthase
+ (subunit b) K02109;
+ COG: NOG17164 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573319.1"
+ /db_xref="GI:161506207"
+ /db_xref="InterPro:IPR009468"
+ /translation="MKYRIALAITLFTLSAGSYANTLCPEKEQDIQKEISYAEKHNNQ
+ RRIEGLNKALSEVRANCTDSKLRAEHQKKIAEQKEEIAERQRDLAEAKAKGDADKINK
+ RERKLAEAQDELKKLEARDY"
+ misc_feature complement(4314702..4315037)
+ /locus_tag="SARI_04399"
+ /note="Protein of unknown function (DUF1090); Region:
+ DUF1090; pfam06476"
+ /db_xref="CDD:203462"
+ gene complement(4315197..4315580)
+ /locus_tag="SARI_04400"
+ CDS complement(4315197..4315580)
+ /locus_tag="SARI_04400"
+ /inference="similar to AA sequence:INSD:AAL22100.1"
+ /note="'COG: NOG09774 non supervised orthologous group;
+ Psort location: extracellular, including cell wall, score:
+ 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573320.1"
+ /db_xref="GI:161506208"
+ /translation="MLKPRITARQFIWISAFLLMLTVLMVAWSTLRQQESTLAIRAVN
+ QGASIPDGFSVLHHLDANGIHFKSITPKNDMLLITFDSPTQSAAAKAVLDQTLPHGYV
+ VAQQDDDNEAVQWLSRLRENSHRFG"
+ misc_feature complement(4315200..4315580)
+ /locus_tag="SARI_04400"
+ /note="EnvZ/OmpR regulon moderator; Provisional; Region:
+ PRK10629"
+ /db_xref="CDD:236728"
+ gene complement(4315584..4316246)
+ /locus_tag="SARI_04401"
+ CDS complement(4315584..4316246)
+ /locus_tag="SARI_04401"
+ /inference="similar to AA sequence:INSD:CAD07750.1"
+ /note="'KEGG: sab:SAB2386 1.6e-10 probable alkaline
+ phosphatase K01077;
+ COG: COG0586 Uncharacterized membrane-associated protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573321.1"
+ /db_xref="GI:161506209"
+ /translation="MELLTQLLNALWAQDFETLANPSMIGMLYFVLFMILFLENGLLP
+ AAFLPGDSLLILVGVLIAKGAMGFPQTILLLTVAASLGCWVSYIQGRWLGNTRTVQNW
+ LSHLPAHYHQRAHHLFHKHGLSALLIGRFIAFVRTLLPTIAGISGLNNARFQFFNWMS
+ GLLWVLILTSLGYLLGKTPVFMKYEDQLMSYLMLLPVVLLFFGLAGSLVMLWKKKYGG
+ RG"
+ misc_feature complement(4315602..4316186)
+ /locus_tag="SARI_04401"
+ /note="Uncharacterized membrane-associated protein
+ [Function unknown]; Region: DedA; COG0586"
+ /db_xref="CDD:223659"
+ misc_feature complement(4315602..4316165)
+ /locus_tag="SARI_04401"
+ /note="SNARE associated Golgi protein; Region:
+ SNARE_assoc; cl00429"
+ /db_xref="CDD:241858"
+ gene complement(4316563..4316896)
+ /locus_tag="SARI_04402"
+ /pseudogene="unknown"
+ gene complement(4317129..4318373)
+ /locus_tag="SARI_04403"
+ CDS complement(4317129..4318373)
+ /locus_tag="SARI_04403"
+ /inference="protein motif:HMMPfam:IPR001991"
+ /inference="protein motif:ScanRegExp:IPR001991"
+ /inference="similar to AA sequence:INSD:AAL22098.1"
+ /note="involved in the import of serine and threonine
+ coupled with the import of sodium"
+ /codon_start=1
+ /transl_table=11
+ /product="serine/threonine transporter SstT"
+ /protein_id="YP_001573323.1"
+ /db_xref="GI:161506211"
+ /db_xref="InterPro:IPR001991"
+ /translation="MATQRASGLLQRLAQGSLVKQILVGLVLGILLAWVSKPAAEAVG
+ LLGTLFVGALKAVAPILVLMLVMASIANHQHGQKTNIRPILFLYLLGTFSAALAAVVF
+ SFAFPSTLHLSSSAQDIVPPSGIVEVLRGLLISMVSNPIDALLNANYIGILVWAVGLG
+ FALRHGNETTKNLVNDMSNAVTFMVKLVIRFAPVGIFGLVSSTLATTGFSTLWGYAHL
+ LVVLIGCMLLVALVVNPLLVFWKIRRNPYPLVFACLRESGVYAFFTRSSAANIPVNMA
+ LCEKLNLDRDTYSVSIPLGATINMAGAAITITVLTLAAVHTLGVPVDLPTALLLSVVA
+ SLCACGASGVAGGSLLLIPLACNMFGIPNDIAMQVVAVGFIIGVLQDSCETALNSSTD
+ VLFTAAACQAEDERLANNALRS"
+ misc_feature complement(4317162..4318367)
+ /locus_tag="SARI_04403"
+ /note="serine/threonine transporter SstT; Provisional;
+ Region: PRK13628"
+ /db_xref="CDD:184190"
+ misc_feature complement(4317132..4318259)
+ /locus_tag="SARI_04403"
+ /note="Na+/H+-dicarboxylate symporters [Energy production
+ and conversion]; Region: GltP; COG1301"
+ /db_xref="CDD:224220"
+ unsure 4317975..4318000
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(4318627..4319595)
+ /locus_tag="SARI_04404"
+ CDS complement(4318627..4319595)
+ /locus_tag="SARI_04404"
+ /inference="protein motif:HMMPfam:IPR005496"
+ /inference="similar to AA sequence:SwissProt:Q8ZLX2"
+ /note="'COG: COG0861 Membrane protein TerC, possibly
+ involved in tellurium resistance;
+ Psort location: plasma membrane, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573324.1"
+ /db_xref="GI:161506212"
+ /db_xref="InterPro:IPR005496"
+ /translation="MNTVGTPLLWGGFTVVVVIMLSIDLLLQGRRGAHAMSMKQAAGW
+ SILWVTLSLLFNAAFWWYLAETQGREVADPQALAFLTGYLIEKSLAVDNVFVWLMLFS
+ YFSVPPALQRRVLVYGVLGAIVLRTIMIFAGTWLIAQFEWLLYVFGAFLLFTGVKMAL
+ AKEDKSGIGEKPMVRWLRGHLRMTDTIENEHFFVRKNGLLYATPLLLVLIMVEFSDVI
+ FAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFLLSGVAERFSMLKYGLAVILVFI
+ GIKMLIVDFYHIPIAVSLGVVFGILTITLVINAWVNHQRDKKLRAQ"
+ misc_feature complement(4318660..4319580)
+ /locus_tag="SARI_04404"
+ /note="integral membrane protein, TerC family; Region:
+ R_switched_Alx; TIGR03718"
+ /db_xref="CDD:234327"
+ gene complement(4319864..4320862)
+ /locus_tag="SARI_04405"
+ CDS complement(4319864..4320862)
+ /locus_tag="SARI_04405"
+ /inference="protein motif:HMMPfam:IPR000683"
+ /inference="similar to AA sequence:INSD:AAL22096.1"
+ /note="'KEGG: ecc:c3845 1.5e-146 ygjR; hypothetical
+ oxidoreductase YgjR;
+ COG: COG0673 Predicted dehydrogenases and related
+ proteins;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573325.1"
+ /db_xref="GI:161506213"
+ /db_xref="InterPro:IPR000683"
+ /translation="MIRFSVIGTNWITRQFVDAAHETGKFRLTAVYSRSLEQAQSFAN
+ DYPVEHLFTSLEAMAQSDAIEAVYIASPNSLHFSQTQLFLQHKKHVMCEKPLASNLTE
+ VDAAIACARDNQQVLFEAFKTANLPNFLVLRESLPKIGRMHKALLNYCQYSSRYQRYL
+ NGENPNTFNPAFSSGSIMDIGYYCLASAIVLWGEPRSVQASANLLESGVDAHGVVVMD
+ YGDFSVTLQHSKVSDSVLASEIQGEAGSLVIEKLSECQKVCFAPRGALMQDLTQPQHI
+ NTMLYEAEAFARLIETHAVEHPGLSLSRATAKWLTEIRRQTGVIFPADDMTHPLPA"
+ misc_feature complement(4319939..4320862)
+ /locus_tag="SARI_04405"
+ /note="Predicted dehydrogenases and related proteins
+ [General function prediction only]; Region: MviM; COG0673"
+ /db_xref="CDD:223745"
+ misc_feature complement(4320500..4320859)
+ /locus_tag="SARI_04405"
+ /note="Oxidoreductase family, NAD-binding Rossmann fold;
+ Region: GFO_IDH_MocA; pfam01408"
+ /db_xref="CDD:201778"
+ unsure 4320116..4320279
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(4320994..4321485)
+ /locus_tag="SARI_04406"
+ CDS complement(4320994..4321485)
+ /locus_tag="SARI_04406"
+ /inference="protein motif:HMMPfam:IPR002725"
+ /inference="protein motif:superfamily:IPR011057"
+ /inference="similar to AA sequence:INSD:CAD07745.1"
+ /note="'COG: COG1451 Predicted metal-dependent hydrolase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573326.1"
+ /db_xref="GI:161506214"
+ /db_xref="InterPro:IPR002725"
+ /db_xref="InterPro:IPR011057"
+ /translation="MTSLPYLQGYPEHLLAQVRALIAGQGLGTMLEKRYPGAHDYATD
+ KALYHYTQELKSQFLRNAPPINKVMYDSKIHVLKNALGLHTAVSRVQGGKLKAKAEIR
+ VATVFRNAPEPFLRMIVVHELAHLKEKEHNKAFYQLCCHMEPQYHQLEFDTRLWLTHQ
+ ALA"
+ misc_feature complement(4321000..>4321470)
+ /locus_tag="SARI_04406"
+ /note="Predicted metal-dependent hydrolase [General
+ function prediction only]; Region: COG1451"
+ /db_xref="CDD:224368"
+ gene 4321571..4322707
+ /locus_tag="SARI_04407"
+ CDS 4321571..4322707
+ /locus_tag="SARI_04407"
+ /inference="protein motif:HMMPfam:IPR007848"
+ /inference="protein motif:ScanRegExp:IPR002052"
+ /inference="similar to AA sequence:INSD:AAV78922.1"
+ /note="'KEGG: stm:STM3220 1.2e-201 ygjO; putative
+ ribosomal RNA small subunit methyltransferase D K00564;
+ COG: COG2813 16S RNA G1207 methylase RsmC;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573327.1"
+ /db_xref="GI:161506215"
+ /db_xref="InterPro:IPR002052"
+ /db_xref="InterPro:IPR007848"
+ /translation="MSHVDDGFRSLTLKRFPQTDDVNPLLAWEAADEYLLQQLDETEI
+ RGPVLILNDTFGALSCALAEHSPYSIGDSYLSELGTRENLRHNGIAESSVMFLDSTAD
+ YPQAPGVVLIKVPKTLALLEQQLRALRKVVTAQTRIIAGAKARDIHTSTLELFEKVLG
+ PTTTTLAWKKARLINCTFSNPQLADAPQTLSWKLEDTGWTIHNHANVFSRTGLDIGAR
+ FFMQHLPENLEGEIVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVETNM
+ PEAFERCEFMINNALSGVEPYRFNAVFCNPPFHQKHALTDNIAWEMFHHARRCLKING
+ ELYIVANRHLDYFHKLKKIFGNCATIATNNKFVILKAVKPGRRR"
+ misc_feature 4321571..4322704
+ /locus_tag="SARI_04407"
+ /note="SAM-dependent 23S ribosomal RNA mG1835
+ methyltransferase; Provisional; Region: PRK15001"
+ /db_xref="CDD:184963"
+ misc_feature 4322264..4322587
+ /locus_tag="SARI_04407"
+ /note="S-adenosylmethionine-dependent methyltransferases
+ (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
+ that use S-adenosyl-L-methionine (SAM or AdoMet) as a
+ substrate for methyltransfer, creating the product
+ S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
+ cd02440"
+ /db_xref="CDD:100107"
+ misc_feature order(4322273..4322293,4322345..4322350,4322432..4322440,
+ 4322483..4322485)
+ /locus_tag="SARI_04407"
+ /note="S-adenosylmethionine binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:100107"
+ gene complement(4322814..4324844)
+ /locus_tag="SARI_04408"
+ CDS complement(4322814..4324844)
+ /locus_tag="SARI_04408"
+ /inference="protein motif:BlastProDom:IPR001327"
+ /inference="protein motif:HMMPfam:IPR001155"
+ /inference="protein motif:HMMPfam:IPR013027"
+ /note="'KEGG: stm:STM3219 0. fadH; 2,4-dieonyl-CoA
+ reductase K00219;
+ COG: COG0446 Uncharacterized NAD(FAD)-dependent
+ dehydrogenases;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573328.1"
+ /db_xref="GI:161506216"
+ /db_xref="InterPro:IPR001155"
+ /db_xref="InterPro:IPR001327"
+ /db_xref="InterPro:IPR013027"
+ /translation="MDTFMSYPSLFAPLELGFTTLRNRVLMGSMHTGLEEHSDGAERL
+ AAFYAERARHGVALIVTGGIAPAPSGVVMPGGAMLNDASQLGHHRVVTDAVHAEGGKI
+ ALQILHTGRYSYQPHLVAPSAIQAPVNRFTPHELRHNEILQLIDDFAHCAQLAREAGY
+ DGVEVMGSEGYLINEFLTRRTNHRNDEWGGDYDNRMRFAVEVVRAVRQRVGNDFIIIY
+ RLSMLDLVEDGGTFDETVQLAQAVEAAGVTLINTGIGWHEARIPTIATPVPRGAFSWV
+ TRRLKGLVSVPLIATNRINDPQVAEAILARGDADMVSMARPFLADAEFLAKAQSGRAN
+ EINTCIGCNQACLDRIFIGKVTSCLVNPRACHESQMPITPAIRKKKLAVVGAGPAGLA
+ FAINAASRGHHVTLFDAHNEIGGQFTIARQIPGKEEFYETLRYYRRMIDVTGVTLKLN
+ QQVNAEDLQPFDEAILACGIEPRRPPIDGIDHPKVLTYLQVLRDKTPVGKRVAIIGCG
+ GIGFDTAMYLSQHGESTSQNIAEFCTEWGIDTSLQQAGGLRPEGPRLTRSPRQIVMLQ
+ RKTGKPGEGLGKTTGWIHRATLLARGVKMLPAVSYQKIDDDGLHLLIGGEPQLLEVDH
+ VVICAGQEPRRELAEPLRAAGKTVHLIGGCDVAMELDARRAIAQGTRLALEI"
+ misc_feature complement(4323768..4324832)
+ /locus_tag="SARI_04408"
+ /note="NADH:flavin oxidoreductases, Old Yellow Enzyme
+ family [Energy production and conversion]; Region: NemA;
+ COG1902"
+ /db_xref="CDD:224814"
+ misc_feature complement(4323759..4324817)
+ /locus_tag="SARI_04408"
+ /note="2,4-dienoyl-CoA reductase (DCR) FMN-binding domain.
+ DCR in E. coli is an iron-sulfur flavoenzyme which
+ contains FMN, FAD, and a 4Fe-4S cluster. It is also a
+ monomer, unlike that of its eukaryotic counterparts which
+ form homotetramers and lack the...; Region: DCR_FMN;
+ cd02930"
+ /db_xref="CDD:239240"
+ misc_feature complement(order(4323771..4323773,4323807..4323809,
+ 4323819..4323821,4323828..4323830,4323897..4323902,
+ 4324065..4324067,4324074..4324076,4324188..4324190,
+ 4324305..4324307,4324332..4324334,4324338..4324340,
+ 4324530..4324532,4324656..4324658,4324752..4324754,
+ 4324758..4324760))
+ /locus_tag="SARI_04408"
+ /note="active site"
+ /db_xref="CDD:239240"
+ misc_feature complement(order(4323897..4323902,4324188..4324190,
+ 4324530..4324532,4324656..4324658,4324752..4324754,
+ 4324758..4324760))
+ /locus_tag="SARI_04408"
+ /note="FMN binding site [chemical binding]; other site"
+ /db_xref="CDD:239240"
+ misc_feature complement(order(4324065..4324067,4324074..4324076,
+ 4324305..4324307,4324332..4324334,4324338..4324340))
+ /locus_tag="SARI_04408"
+ /note="2,4-decadienoyl-CoA binding site; other site"
+ /db_xref="CDD:239240"
+ misc_feature complement(4324332..4324334)
+ /locus_tag="SARI_04408"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:239240"
+ misc_feature complement(order(4323771..4323773,4323807..4323809,
+ 4323819..4323821,4323828..4323830))
+ /locus_tag="SARI_04408"
+ /note="4Fe-4S cluster binding site [ion binding]; other
+ site"
+ /db_xref="CDD:239240"
+ misc_feature complement(4322838..>4323770)
+ /locus_tag="SARI_04408"
+ /note="Uncharacterized NAD(FAD)-dependent dehydrogenases
+ [General function prediction only]; Region: HcaD; COG0446"
+ /db_xref="CDD:223523"
+ gene complement(4325003..4326292)
+ /locus_tag="SARI_04409"
+ CDS complement(4325003..4326292)
+ /locus_tag="SARI_04409"
+ /inference="protein motif:HMMPanther:IPR005814"
+ /inference="protein motif:HMMPanther:IPR010164"
+ /inference="protein motif:HMMPfam:IPR005814"
+ /inference="protein motif:HMMTigr:IPR010164"
+ /inference="protein motif:ScanRegExp:IPR005814"
+ /inference="similar to AA sequence:REFSEQ:NP_462132.1"
+ /note="catalyzes the formation of 4-aminobutyraldehyde
+ from putrescine and 2-oxoglutarate"
+ /codon_start=1
+ /transl_table=11
+ /product="putrescine--2-oxoglutarate aminotransferase"
+ /protein_id="YP_001573329.1"
+ /db_xref="GI:161506217"
+ /db_xref="InterPro:IPR005814"
+ /db_xref="InterPro:IPR010164"
+ /translation="MKALNREVIDYFKEHVNPGFLEYRKSVTAGGDYGAVEWQAGSLN
+ TLVNTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAILAKT
+ LAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSA
+ TAKSTFRKPFMPLLPGFRHVTFGNINAMRMAFSEGKKTGDEIAAVILEPIQGEGGVIL
+ PPQGYLTEVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGV
+ MPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGD
+ TLLDGFRQLAREYPDLVHDARGKGMLMAIEFVDNETGYRFASEMFRQRVLVAGTLNNA
+ KTIRIEPPLTLTIELCEQVLKSARNALAAMQVSVEEV"
+ misc_feature complement(4325006..4326292)
+ /locus_tag="SARI_04409"
+ /note="putrescine--2-oxoglutarate aminotransferase;
+ Provisional; Region: PRK11522"
+ /db_xref="CDD:183175"
+ misc_feature complement(4325036..4326163)
+ /locus_tag="SARI_04409"
+ /note="Acetyl ornithine aminotransferase family. This
+ family belongs to pyridoxal phosphate (PLP)-dependent
+ aspartate aminotransferase superfamily (fold I). The major
+ groups in this CD correspond to ornithine
+ aminotransferase, acetylornithine aminotransferase;
+ Region: OAT_like; cd00610"
+ /db_xref="CDD:99735"
+ misc_feature complement(order(4325483..4325485,4325561..4325566,
+ 4325570..4325572,4325669..4325671,4325834..4325836,
+ 4325840..4325845,4325930..4325938))
+ /locus_tag="SARI_04409"
+ /note="inhibitor-cofactor binding pocket; inhibition site"
+ /db_xref="CDD:99735"
+ misc_feature complement(order(4325483..4325485,4325561..4325563,
+ 4325570..4325572,4325669..4325671,4325840..4325845,
+ 4325930..4325935))
+ /locus_tag="SARI_04409"
+ /note="pyridoxal 5'-phosphate binding site [chemical
+ binding]; other site"
+ /db_xref="CDD:99735"
+ misc_feature complement(4325483..4325485)
+ /locus_tag="SARI_04409"
+ /note="catalytic residue [active]"
+ /db_xref="CDD:99735"
+ gene 4326529..4326747
+ /locus_tag="SARI_04410"
+ CDS 4326529..4326747
+ /locus_tag="SARI_04410"
+ /note="'Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573330.1"
+ /db_xref="GI:161506218"
+ /translation="MHFEQILFYGLRCVALAAASEKDEPGQILKKKVVHAKQFHNENN
+ VQDDVKIVQILRINRKLRSRSILTTKDK"
+ gene 4326811..4328331
+ /locus_tag="SARI_04411"
+ CDS 4326811..4328331
+ /locus_tag="SARI_04411"
+ /inference="protein motif:HMMPfam:IPR003660"
+ /inference="protein motif:HMMPfam:IPR004089"
+ /inference="protein motif:HMMPfam:IPR013655"
+ /inference="protein motif:HMMSmart:IPR001610"
+ /inference="protein motif:HMMSmart:IPR004089"
+ /inference="protein motif:HMMTigr:IPR000014"
+ /inference="similar to AA sequence:REFSEQ:YP_152231.1"
+ /note="'KEGG: azo:azo3685 6.7e-13 putative hybrid sensor
+ and regulator protein;
+ COG: COG2202 FOG: PAS/PAC domain;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573331.1"
+ /db_xref="GI:161506219"
+ /db_xref="InterPro:IPR000014"
+ /db_xref="InterPro:IPR001610"
+ /db_xref="InterPro:IPR003660"
+ /db_xref="InterPro:IPR004089"
+ /db_xref="InterPro:IPR013655"
+ /translation="MSSHPYVSQRNTPLDDDTTLMSTTDLESYITHANDSFVQVSGYQ
+ LNELLAQPHNLARHPDMPKAAFADMWYTLKQGEPWSGIVKNRRKNGDHYWVRANAVPM
+ IRKGHVTGYMSIRTRATDDEIAAVEPLYKALNEGRCSKRIHKGLVVRQGLLGKLPAMP
+ VRWRVCSIMGLMAVMLAVALFYTDASWLALLMGALTMLVGTALFEWQIVRPIENVATQ
+ ALKVATGERNSVRHLNRSDELGLTLRAVGQLGLMCRWLINDVSSQVSSVRNGSEMLAK
+ GSDTLNKHTRQSVENVQETVTNMNQMAESVKLNSETSSAADKLSIAASSAAMQGGEAM
+ DTVIKTMDDIANSTQRIGTITTLINDIAFQTNILALNAAVEAARAGEQGKGFAVVAGE
+ VRHLASRSANAANDIRKLIDASATKVQSGSEQVHAAGRTMDDIVAQVQNVTQLIARIS
+ QSTLEQTDGLSSLTRAVDELNRTTQKNAELVEESAQVSAMVKHHASRLEDAVSVLH"
+ misc_feature 4326898..4327161
+ /locus_tag="SARI_04411"
+ /note="PAS domain; PAS motifs appear in archaea,
+ eubacteria and eukarya. Probably the most surprising
+ identification of a PAS domain was that in EAG-like
+ K+-channels. PAS domains have been found to bind ligands,
+ and to act as sensors for light and oxygen in...; Region:
+ PAS; cd00130"
+ /db_xref="CDD:238075"
+ misc_feature 4326898..4327155
+ /locus_tag="SARI_04411"
+ /note="PAS fold; Region: PAS_3; pfam08447"
+ /db_xref="CDD:219844"
+ misc_feature order(4326907..4326909,4326919..4326921,4326937..4326939,
+ 4326976..4326987,4327063..4327065,4327078..4327080)
+ /locus_tag="SARI_04411"
+ /note="putative active site [active]"
+ /db_xref="CDD:238075"
+ misc_feature order(4326967..4326969,4326979..4326981,4327003..4327005,
+ 4327012..4327017,4327099..4327101,4327105..4327107)
+ /locus_tag="SARI_04411"
+ /note="heme pocket [chemical binding]; other site"
+ /db_xref="CDD:238075"
+ misc_feature 4327261..4328325
+ /locus_tag="SARI_04411"
+ /note="Methyl-accepting chemotaxis protein [Cell motility
+ and secretion / Signal transduction mechanisms]; Region:
+ Tar; COG0840"
+ /db_xref="CDD:223910"
+ misc_feature 4327366..4327557
+ /locus_tag="SARI_04411"
+ /note="HAMP domain; Region: HAMP; pfam00672"
+ /db_xref="CDD:216054"
+ misc_feature 4327678..4328265
+ /locus_tag="SARI_04411"
+ /note="Methyl-accepting chemotaxis protein (MCP),
+ signaling domain; Region: MCP_signal; cd11386"
+ /db_xref="CDD:206779"
+ misc_feature order(4327690..4327695,4327702..4327707,4327714..4327716,
+ 4327723..4327728,4327732..4327737,4327744..4327746,
+ 4327753..4327758,4327765..4327767,4327774..4327779,
+ 4327786..4327791,4327798..4327800,4327807..4327812,
+ 4327816..4327821,4327831..4327833,4327837..4327842,
+ 4327849..4327851,4327858..4327863,4327870..4327875,
+ 4327882..4327884,4327891..4327893,4327900..4327905,
+ 4327912..4327914,4327924..4327926,4327933..4327935,
+ 4327954..4327956,4327966..4327968,4327975..4327977,
+ 4327984..4327989,4327996..4327998,4328005..4328010,
+ 4328017..4328022,4328026..4328031,4328038..4328043,
+ 4328080..4328085,4328092..4328094,4328101..4328106,
+ 4328113..4328115,4328122..4328127,4328131..4328136,
+ 4328143..4328148,4328155..4328157,4328164..4328169,
+ 4328176..4328178,4328185..4328190,4328194..4328199,
+ 4328206..4328211,4328215..4328220,4328227..4328229,
+ 4328236..4328241,4328248..4328250,4328257..4328262)
+ /locus_tag="SARI_04411"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:206779"
+ misc_feature 4327900..4328001
+ /locus_tag="SARI_04411"
+ /note="putative CheW interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:206779"
+ gene 4328713..4330299
+ /locus_tag="SARI_04412"
+ CDS 4328713..4330299
+ /locus_tag="SARI_04412"
+ /inference="protein motif:FPrintScan:IPR004090"
+ /inference="protein motif:HMMPfam:IPR003660"
+ /inference="protein motif:HMMPfam:IPR004089"
+ /inference="protein motif:HMMSmart:IPR003660"
+ /inference="protein motif:HMMSmart:IPR004089"
+ /inference="similar to AA sequence:REFSEQ:NP_462130.1"
+ /note="'KEGG: abo:ABO_1307 4.7e-09 sensor histidine
+ kinase/respose regulator;
+ COG: COG0840 Methyl-accepting chemotaxis protein;
+ Psort location: endoplasmic reticulum, score: 9'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573332.1"
+ /db_xref="GI:161506220"
+ /db_xref="InterPro:IPR003660"
+ /db_xref="InterPro:IPR004089"
+ /db_xref="InterPro:IPR004090"
+ /translation="MQSQGENMFLHNIKIRSKLFIAFGLFIVLMVASSALSLFSLDRA
+ NTGMQNIITNDYPTTVKANLLIDNFNDFIIAQQLMLLDEEGRWSQSSQKELNEISQRI
+ SALLDDLSSNRHDAASQKIITEIREARQQYLESRFRILQDIQSHNRQAAIEEMMTRTV
+ QVQKVYKDKVQELIAVQDAQMHNAGVQVEGDFKTNRTLLITLALISIAAGCVMGWYIV
+ RSITRPLDEAVRFAEAIADGDLTRHITTDYKDETGVLLQALMAMKTRLLDIVQEVQNG
+ SESISTAAAQIVAGNQDLAARTEEQASSVEETAASMEQITSTVKNTADHTSEATKLSA
+ GAASVVKNNGEMMNQVTQKMRVINDTANRMSDIINIIDSIAFQTNILALNAAVEAARA
+ GEHGRGFAVVAGEVRQLAQKSASSASEIRNLIEDSTSQTQEGMQLVEKASALINGMVD
+ NVEEMDVILREIGQASREQTDGISQINSAIGLIDAATQQNSCLVEESVAAAASLNEQA
+ LHLKELVNVFRVREEDAQPA"
+ misc_feature 4328746..4329183
+ /locus_tag="SARI_04412"
+ /note="Four helix bundle sensory module for signal
+ transduction; Region: 4HB_MCP_1; pfam12729"
+ /db_xref="CDD:193205"
+ misc_feature 4329373..4329516
+ /locus_tag="SARI_04412"
+ /note="Histidine kinase, Adenylyl cyclase,
+ Methyl-accepting protein, and Phosphatase (HAMP) domain.
+ HAMP is a signaling domain which occurs in a wide variety
+ of signaling proteins, many of which are bacterial. The
+ HAMP domain consists of two alpha helices...; Region:
+ HAMP; cd06225"
+ /db_xref="CDD:100122"
+ misc_feature order(4329373..4329378,4329385..4329390,4329394..4329399,
+ 4329406..4329411,4329415..4329417,4329463..4329468,
+ 4329472..4329477,4329484..4329489,4329493..4329498,
+ 4329505..4329510)
+ /locus_tag="SARI_04412"
+ /note="dimerization interface [polypeptide binding]; other
+ site"
+ /db_xref="CDD:100122"
+ misc_feature 4329526..4330269
+ /locus_tag="SARI_04412"
+ /note="Methyl-accepting chemotaxis-like domains
+ (chemotaxis sensory transducer); Region: MA; smart00283"
+ /db_xref="CDD:214599"
+ misc_feature 4329607..4330203
+ /locus_tag="SARI_04412"
+ /note="Methyl-accepting chemotaxis protein (MCP),
+ signaling domain; Region: MCP_signal; cd11386"
+ /db_xref="CDD:206779"
+ misc_feature order(4329631..4329636,4329643..4329648,4329655..4329657,
+ 4329664..4329669,4329673..4329678,4329685..4329687,
+ 4329694..4329699,4329706..4329708,4329715..4329720,
+ 4329727..4329732,4329739..4329741,4329748..4329753,
+ 4329757..4329762,4329772..4329774,4329778..4329783,
+ 4329790..4329792,4329799..4329804,4329811..4329816,
+ 4329823..4329825,4329832..4329834,4329841..4329846,
+ 4329853..4329855,4329865..4329867,4329874..4329876,
+ 4329895..4329897,4329907..4329909,4329916..4329918,
+ 4329925..4329930,4329937..4329939,4329946..4329951,
+ 4329958..4329963,4329967..4329972,4329979..4329984,
+ 4330021..4330026,4330033..4330035,4330042..4330047,
+ 4330054..4330056,4330063..4330068,4330072..4330077,
+ 4330084..4330089,4330096..4330098,4330105..4330110,
+ 4330117..4330119,4330126..4330131,4330135..4330140,
+ 4330147..4330152,4330156..4330161,4330168..4330170,
+ 4330177..4330182,4330189..4330191,4330198..4330203)
+ /locus_tag="SARI_04412"
+ /note="dimer interface [polypeptide binding]; other site"
+ /db_xref="CDD:206779"
+ misc_feature 4329841..4329942
+ /locus_tag="SARI_04412"
+ /note="putative CheW interface [polypeptide binding];
+ other site"
+ /db_xref="CDD:206779"
+ gene complement(4330296..4330943)
+ /locus_tag="SARI_04413"
+ CDS complement(4330296..4330943)
+ /locus_tag="SARI_04413"
+ /inference="similar to AA sequence:INSD:CAD07739.1"
+ /note="'COG: COG1695 Predicted transcriptional regulators;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573333.2"
+ /db_xref="GI:448236295"
+ /translation="MQNQYEGCCKNRDHKHDGCCKDREHHHEGCHSAHQHENASCGGE
+ QHRHGHGCGHHGRGGGRRQRFFGHGELRLVILDILTQDASHGYELIKAIENLTGGDYT
+ PSAGVIYPTLDFLQEQQFITISDEEGGRKKIAITAKGAQWLDENREHLTHIQARLKAR
+ CVGMELRKNPQMKRALDNFKAVLDLRINHSDINDAQIKRIIGVIDRAALEIAELD"
+ misc_feature complement(4330359..4330733)
+ /locus_tag="SARI_04413"
+ /note="Predicted transcriptional regulators
+ [Transcription]; Region: COG1695"
+ /db_xref="CDD:224609"
+ misc_feature complement(4330509..4330721)
+ /locus_tag="SARI_04413"
+ /note="Transcriptional regulator PadR-like family; Region:
+ PadR; pfam03551"
+ /db_xref="CDD:217610"
+ gene 4331175..4331942
+ /locus_tag="SARI_04415"
+ CDS 4331175..4331942
+ /locus_tag="SARI_04415"
+ /inference="protein motif:HMMPfam:IPR007037"
+ /inference="protein motif:HMMPfam:IPR013113"
+ /inference="similar to AA sequence:REFSEQ:YP_152228.1"
+ /note="'COG: COG2375 Siderophore-interacting protein;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="hypothetical protein"
+ /protein_id="YP_001573335.1"
+ /db_xref="GI:161506223"
+ /db_xref="InterPro:IPR007037"
+ /db_xref="InterPro:IPR013113"
+ /translation="MTTSSVRYPQRVRNELRFRELTVLRVERISAGFQRIVLGGEALD
+ GFTSRGFDDHTKVFFPEPGDRFTPPIVTEEGIIWGEGVRPASRDYTPLYDEARRELAL
+ DFFIHDGGVASRWAMEAREGDTLTIGGPRGSLVVPEDYAYQVYVCDESGMPALRRRLE
+ SLSLLPVRPAVTALVSIQDAAYRDYLAHVTDITVDYVVGGDEQAIQTLLSQLTIPDSD
+ YFIWITGEGKTVKHLSQRFENGFDPQLVRTAAYWHRK"
+ misc_feature 4331178..4331939
+ /locus_tag="SARI_04415"
+ /note="Siderophore-interacting protein [Inorganic ion
+ transport and metabolism]; Region: ViuB; COG2375"
+ /db_xref="CDD:225250"
+ misc_feature 4331241..4331930
+ /locus_tag="SARI_04415"
+ /note="Siderophore interacting proteins share the domain
+ structure of the ferredoxin reductase like family.
+ Siderophores are produced in various bacteria (and some
+ plants) to extract iron from hosts. Binding constants are
+ high, so iron can be pilfered from...; Region:
+ siderophore_interacting; cd06193"
+ /db_xref="CDD:99790"
+ misc_feature order(4331433..4331444,4331481..4331483,4331487..4331489,
+ 4331493..4331495,4331502..4331513,4331622..4331624,
+ 4331925..4331930)
+ /locus_tag="SARI_04415"
+ /note="FAD binding pocket [chemical binding]; other site"
+ /db_xref="CDD:99790"
+ misc_feature order(4331433..4331435,4331439..4331444)
+ /locus_tag="SARI_04415"
+ /note="FAD binding motif [chemical binding]; other site"
+ /db_xref="CDD:99790"
+ misc_feature order(4331502..4331504,4331511..4331513,4331520..4331522,
+ 4331538..4331540)
+ /locus_tag="SARI_04415"
+ /note="phosphate binding motif [ion binding]; other site"
+ /db_xref="CDD:99790"
+ misc_feature order(4331622..4331627,4331700..4331708,4331847..4331852)
+ /locus_tag="SARI_04415"
+ /note="NAD binding pocket [chemical binding]; other site"
+ /db_xref="CDD:99790"
+ gene complement(4332025..4332097)
+ /locus_tag="SARI_04416"
+ tRNA complement(4332025..4332097)
+ /locus_tag="SARI_04416"
+ /product="tRNA-Met"
+ unsure 4332193..4332199
+ /note="Sequence derived from one plasmid subclone"
+ gene 4332223..4332729
+ /locus_tag="SARI_04417"
+ CDS 4332223..4332729
+ /locus_tag="SARI_04417"
+ /inference="protein motif:HMMPfam:IPR005122"
+ /inference="similar to AA sequence:INSD:AAO70675.1"
+ /note="'KEGG: sty:STY3391 4.1e-87 mug; G/U
+ mismatch-specific DNA glycosylase K03649;
+ COG: COG3663 G:T/U mismatch-specific DNA glycosylase;
+ Psort location: cytoplasmic, score: 23'"
+ /codon_start=1
+ /transl_table=11
+ /product="G/U mismatch-specific DNA glycosylase"
+ /protein_id="YP_001573336.1"
+ /db_xref="GI:161506224"
+ /db_xref="InterPro:IPR005122"
+ /translation="MVKDILAPGLRVVFCGINPGLSSANTGFPFAHPANRFWKVIHLA
+ GFTDRQLKPEEAEKLLDFRCGVTKLVDRPTVQATEVKLHELRSGGRNLIEKIEDYQPA
+ ALAVLGKQAFEQGFSQRGIAWGKQKIAIGATMVWVLPNPSGLNRIKTEKLVEAYRELD
+ QALIMRGL"
+ misc_feature 4332226..4332699
+ /locus_tag="SARI_04417"
+ /note="G:T/U mismatch specific DNA glcosylase (MUG);
+ Region: UDG_F2_MUG; cd10028"
+ /db_xref="CDD:198426"
+ misc_feature order(4332271..4332276,4332280..4332282,4332319..4332327,
+ 4332544..4332552,4332589..4332591,4332637..4332642,
+ 4332646..4332654)
+ /locus_tag="SARI_04417"
+ /note="active site"
+ /db_xref="CDD:198426"
+ misc_feature order(4332346..4332351,4332679..4332684,4332691..4332693)
+ /locus_tag="SARI_04417"
+ /note="SUMO-1 interface [polypeptide binding]; other site"
+ /db_xref="CDD:198426"
+ gene complement(4332853..4334700)
+ /locus_tag="SARI_04418"
+ CDS complement(4332853..4334700)
+ /locus_tag="SARI_04418"
+ /inference="protein motif:Gene3D:IPR011991"
+ /inference="protein motif:HMMPfam:IPR007127"
+ /inference="protein motif:HMMPfam:IPR007624"
+ /inference="protein motif:HMMPfam:IPR007627"
+ /inference="protein motif:HMMPfam:IPR007630"
+ /inference="protein motif:HMMPfam:IPR007631"
+ /inference="protein motif:HMMPfam:IPR009042"
+ /inference="protein motif:HMMTigr:IPR012760"
+ /inference="protein motif:ScanRegExp:IPR000943"
+ /inference="protein motif:superfamily:IPR013324"
+ /inference="protein motif:superfamily:IPR013325"
+ /note="sigma factors are initiation factors that promote
+ the attachment of RNA polymerase to specific initiation
+ sites and are then released; this is the primary sigma
+ factor of bacteria"
+ /codon_start=1
+ /transl_table=11
+ /product="RNA polymerase sigma factor RpoD"
+ /protein_id="YP_001573337.2"
+ /db_xref="GI:448236296"
+ /db_xref="InterPro:IPR000943"
+ /db_xref="InterPro:IPR007127"
+ /db_xref="InterPro:IPR007624"
+ /db_xref="InterPro:IPR007627"
+ /db_xref="InterPro:IPR007630"
+ /db_xref="InterPro:IPR007631"
+ /db_xref="InterPro:IPR009042"
+ /db_xref="InterPro:IPR011991"
+ /db_xref="InterPro:IPR012760"
+ /db_xref="InterPro:IPR013324"
+ /db_xref="InterPro:IPR013325"
+ /translation="MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDI
+ IQMINDMGIQVMEEAPDADDLLLAENTTSTDEDAEEAAAQVLSSVESEIGRTTDPVRM
+ YMREMGTVELLTREGEIDIAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARL
+ SDLITGFVDPNAEEEMAPTATHVGSELSQEDLDDDEDEDEEDGDDDAADDDNSIDPEL
+ AREKFAELRAQYIVTRDTIKAKGRSHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMR
+ VMMDRVRTQERLIMKLCVEQCKMPKKNFITLFTGNETSETWFNAAIAMNKPWSEKLHD
+ VAEEVQRCLQKLRQIEEETGLTIEQVKDINRRMSIGEAKARRAKKEMVEANLRLVISI
+ AKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQAR
+ TIRIPVHMIETINKLNRISRQMLQEMGREPTPEELAERMLMPEDKIRKVLKIAKEPIS
+ METPIGDDEDSHLGDFIEDTTLELPLDSATTESLRAATHDVLAGLTAREAKVLRMRFG
+ IDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDD"
+ misc_feature complement(4332856..4334700)
+ /locus_tag="SARI_04418"
+ /note="RNA polymerase sigma factor RpoD; Validated;
+ Region: PRK05658"
+ /db_xref="CDD:235549"
+ misc_feature complement(<4334506..4334700)
+ /locus_tag="SARI_04418"
+ /note="Sigma-70 factor, region 1.1; Region: Sigma70_r1_1;
+ pfam03979"
+ /db_xref="CDD:217827"
+ misc_feature complement(4334317..4334412)
+ /locus_tag="SARI_04418"
+ /note="Sigma-70 factor, region 1.2; Region: Sigma70_r1_2;
+ pfam00140"
+ /db_xref="CDD:201030"
+ misc_feature complement(4333651..4334286)
+ /locus_tag="SARI_04418"
+ /note="Sigma-70, non-essential region; Region:
+ Sigma70_ner; pfam04546"
+ /db_xref="CDD:203043"
+ misc_feature complement(4333348..4333560)
+ /locus_tag="SARI_04418"
+ /note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542"
+ /db_xref="CDD:218138"
+ misc_feature complement(4333090..4333323)
+ /locus_tag="SARI_04418"
+ /note="Sigma-70 region 3; Region: Sigma70_r3; pfam04539"
+ /db_xref="CDD:146934"
+ misc_feature complement(4332898..4333074)
+ /locus_tag="SARI_04418"
+ /note="Sigma70, region (SR) 4 refers to the most
+ C-terminal of four conserved domains found in Escherichia
+ coli (Ec) sigma70, the main housekeeping sigma, and
+ related sigma-factors (SFs). A SF is a dissociable subunit
+ of RNA polymerase, it directs bacterial or...; Region:
+ Sigma70_r4; cd06171"
+ /db_xref="CDD:100119"
+ misc_feature complement(order(4332910..4332912,4332916..4332921,
+ 4332925..4332933,4332937..4332942,4332946..4332948,
+ 4332976..4332981,4333009..4333011,4333039..4333041))
+ /locus_tag="SARI_04418"
+ /note="DNA binding residues [nucleotide binding]"
+ /db_xref="CDD:100119"
+ unsure 4332929..4333064
+ /note="Sequence derived from one plasmid subclone"
+ unsure 4334071..4334378
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(4334850..4336592)
+ /gene="dnaG"
+ /locus_tag="SARI_04419"
+ CDS complement(4334850..4336592)
+ /gene="dnaG"
+ /locus_tag="SARI_04419"
+ /inference="protein motif:BlastProDom:IPR002694"
+ /inference="protein motif:BlastProDom:IPR006647"
+ /inference="protein motif:Gene3D:IPR013264"
+ /inference="protein motif:HMMPfam:IPR002694"
+ /inference="protein motif:HMMPfam:IPR006171"
+ /inference="protein motif:HMMPfam:IPR013173"
+ /inference="protein motif:HMMPfam:IPR013264"
+ /inference="protein motif:HMMSmart:IPR002694"
+ /inference="protein motif:HMMSmart:IPR006154"
+ /inference="protein motif:HMMSmart:IPR013173"
+ /inference="protein motif:HMMTigr:IPR006295"
+ /inference="similar to AA sequence:SwissProt:P07362"
+ /note="synthesizes RNA primers at the replication forks"
+ /codon_start=1
+ /transl_table=11
+ /product="DNA primase"
+ /protein_id="YP_001573338.1"
+ /db_xref="GI:161506226"
+ /db_xref="InterPro:IPR002694"
+ /db_xref="InterPro:IPR006154"
+ /db_xref="InterPro:IPR006171"
+ /db_xref="InterPro:IPR006295"
+ /db_xref="InterPro:IPR006647"
+ /db_xref="InterPro:IPR013173"
+ /db_xref="InterPro:IPR013264"
+ /translation="MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNYHACCPFHN
+ EKTPSFTVNGEKQFYHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEIPYEAG
+ TGLSQIERHQRQNLYQLLNGLNDFYQQSLTHPAAKPARDYLQKRGLSAEIIQRFAIGF
+ APPGWDNALKRFGNNSDNKALLLDAGMLVNNEQGSTYDRFRNRVMFPIRDKRGRVIGF
+ GGRVLGNDTPKYLNSPETDIFHKGRQLYGFYEAQQYSAEPQRLLVVEGYMDVVALAQY
+ DINYAVASLGTSTTADHMHMLFRATNNVICCYDGDRAGRDAAWRALETAMPYMTDGRQ
+ VRFMFLPDGEDPDTLVRKEGKAAFEARMEQAQPLSTFLFNSLLPQVDLSSPDGSTQLA
+ ALALPLINQVPGDAHRIQLRQTLGLKLGIFDDSQLDRLVPKQAESGLSRPAPQIKQTP
+ MRILIGLLVQNPSLAPLVPPLQGLAQSKLPGLRLFSELVSLCVAQPGLNTGQLLENYR
+ GTSEYSTLEKLSAWNDIRDENVEKMFTDTLNRIFDAMLEQRLEELIARDRTHRLSSEE
+ RREYWEIRQALEKK"
+ misc_feature complement(4334853..4336589)
+ /gene="dnaG"
+ /locus_tag="SARI_04419"
+ /note="DNA primase; Validated; Region: dnaG; PRK05667"
+ /db_xref="CDD:235551"
+ misc_feature complement(4336287..4336580)
+ /gene="dnaG"
+ /locus_tag="SARI_04419"
+ /note="CHC2 zinc finger; Region: zf-CHC2; pfam01807"
+ /db_xref="CDD:110780"
+ misc_feature complement(4335840..4336217)
+ /gene="dnaG"
+ /locus_tag="SARI_04419"
+ /note="DNA primase catalytic core, N-terminal domain;
+ Region: Toprim_N; pfam08275"
+ /db_xref="CDD:219773"
+ misc_feature complement(4335573..4335815)
+ /gene="dnaG"
+ /locus_tag="SARI_04419"
+ /note="TOPRIM_DnaG_primases: The topoisomerase-primase
+ (TORPIM) nucleotidyl transferase/hydrolase domain found in
+ the active site regions of proteins similar to Escherichia
+ coli DnaG. Primases synthesize RNA primers for the
+ initiation of DNA replication. DnaG...; Region:
+ TOPRIM_DnaG_primases; cd03364"
+ /db_xref="CDD:173784"
+ misc_feature complement(order(4335654..4335656,4335660..4335662,
+ 4335666..4335668,4335786..4335788,4335795..4335800))
+ /gene="dnaG"
+ /locus_tag="SARI_04419"
+ /note="active site"
+ /db_xref="CDD:173784"
+ misc_feature complement(order(4335666..4335668,4335798..4335800))
+ /gene="dnaG"
+ /locus_tag="SARI_04419"
+ /note="metal binding site [ion binding]; metal-binding
+ site"
+ /db_xref="CDD:173784"
+ misc_feature complement(order(4335738..4335740,4335768..4335773,
+ 4335789..4335794))
+ /gene="dnaG"
+ /locus_tag="SARI_04419"
+ /note="interdomain interaction site; other site"
+ /db_xref="CDD:173784"
+ misc_feature complement(4335315..4335491)
+ /gene="dnaG"
+ /locus_tag="SARI_04419"
+ /note="DnaB-helicase binding domain of primase; Region:
+ DnaB_bind; pfam10410"
+ /db_xref="CDD:220737"
+ misc_feature complement(4334874..4335245)
+ /gene="dnaG"
+ /locus_tag="SARI_04419"
+ /note="DNA primase DnaG DnaB-binding; Region:
+ DnaG_DnaB_bind; pfam08278"
+ /db_xref="CDD:219776"
+ unsure 4336473..4336818
+ /note="Sequence derived from one plasmid subclone"
+ gene complement(4336810..4337025)
+ /gene="rpsU"
+ /locus_tag="SARI_04420"
+ CDS complement(4336810..4337025)
+ /gene="rpsU"
+ /locus_tag="SARI_04420"
+ /inference="protein motif:BlastProDom:IPR001911"
+ /inference="protein motif:HMMPfam:IPR001911"
+ /inference="protein motif:HMMTigr:IPR001911"
+ /inference="protein motif:ScanRegExp:IPR001911"
+ /inference="similar to AA sequence:INSD:CAL13709.1"
+ /note="a small basic protein that is one of the last in
+ the subunit assembly; omission does not prevent assembly
+ but the subunit is inactive; binds central domain of 16S
+ rRNA"
+ /codon_start=1
+ /transl_table=11
+ /product="30S ribosomal protein S21"
+ /protein_id="YP_001573339.1"
+ /db_xref="GI:161506227"
+ /db_xref="InterPro:IPR001911"
+ /translation="MPVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTE
+ RKRAKASAVKRHAKKLARENARRTRLY"
+ misc_feature complement(4336834..4337025)
+ /gene="rpsU"
+ /locus_tag="SARI_04420"
+ /note="30S ribosomal protein S21; Reviewed; Region: rpsU;
+ PRK00270"
+ /db_xref="CDD:234707"
+ gene 4337253..4338266
+ /locus_tag="SARI_04421"
+ CDS 4337253..4338266
+ /locus_tag="SARI_04421"
+ /inference="protein motif:BlastProDom:IPR000905"
+ /inference="protein motif:HMMPfam:IPR000905"
+ /inference="protein motif:HMMPIR:IPR009180"
+ /inference="protein motif:HMMTigr:IPR000905"
+ /inference="protein motif:ScanRegExp:IPR000905"
+ /inference="similar to AA sequence:REFSEQ:YP_152223.1"
+ /note="'in most organisms, only the N-terminal domain is
+ present in a single polypeptide; in some archaea this
+ domain is fused to a kinase domain; this gene is essential
+ for growth in Escherichia coli and Bacillus subtilis; the
+ secreted glycoprotease from Pasteurella haemolytica showed
+ specificity for O-sialoglycosylated proteins; the
+ Pyrococcus structure shows DNA-binding properties,
+ iron-binding, ATP-binding, and AP endonuclease activity'"
+ /codon_start=1
+ /transl_table=11
+ /product="putative DNA-binding/iron metalloprotein/AP
+ endonuclease"
+ /protein_id="YP_001573340.1"
+ /db_xref="GI:161506228"
+ /db_xref="InterPro:IPR000905"
+ /db_xref="InterPro:IPR009180"
+ /translation="MRVLGIETSCDETGIAIYDDERGLLANQLYSQVKLHADYGGVVP
+ ELASRDHVRKTVPLIQAALKEAGLMASDIDAVAYTAGPGLVGALLVGATVGRSLAFAW
+ NVPAIPVHHMEGHLLAPMLEDNPPDFPFVALLVSGGHTQLISVTGIGQYELLGESIDD
+ AAGEAFDKTAKLLGLDYPGGPMLSKMALQGTAGRFVFPRPMTDRPGLDFSFSGLKTFA
+ ANTIRSNGEDEQTRADIARAFEDAVVDTLMIKCKRALESTGFKRLVMAGGVSANQTLR
+ AKLAEMMQKRCGEVFYARPEFCTDNGAMIAYAGMVRFKAGVTADLGVTVRPRWPLAEL
+ PAV"
+ misc_feature 4337253..4338263
+ /locus_tag="SARI_04421"
+ /note="UGMP family protein; Validated; Region: PRK09604"
+ /db_xref="CDD:236585"
+ misc_feature 4337259..>