diff test-data/column_join_out3.pileup @ 0:6bb6c0a30c67 draft default tip

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author jjohnson
date Tue, 01 Apr 2014 09:30:45 -0400
parents
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/column_join_out3.pileup	Tue Apr 01 09:30:45 2014 -0400
@@ -0,0 +1,70 @@
+chr1	1	C	1	^:.			X			X
+chr1	2	G	2	.^:.			X			X
+chr1	3	A	2	..			X			X
+chr1	4	C	2	..			X			X
+chr1	5	T	3	..^:.			X			X
+chr1	6	G	3	..^:,			X			X
+chr1	7	C	4	.N.,			X			X
+chr1	8	A	4	...,			X			X
+chr1	9	T	5	..C.,			X			X
+chr1	10	G	5	N...,			X			X
+chr1	11	A	5	.C..,			X			X
+chr1	12	C	5	..N.,			X			X
+chr1	42			X	T	1	^:.	C	1	^:.
+chr1	43			X	G	2	.^:.	C	2	.^:.
+chr1	44			X	T	2	..	T	2	..
+chr1	45			X	C	3	..^:.	A	3	..^:.
+chr1	46			X	G	3	..^:.	G	4	...^:.
+chr1	47			X	T	4	...^:,	A	5	....^:,
+chr1	48			X	A	4	.N.,	T	5	...N,
+chr1	49			X	C	5	....,	G	5	....,
+chr1	50			X	A	5	..G.,	A	5	.G..,
+chr1	51			X	A	5	A...,	G	5	....,
+chr1	52			X	A	5	....,			X
+chr1	53			X	G	5	..N.,			X
+chr2	1	T	6	.C...,			X			X
+chr2	2	G	6	..N..,			X			X
+chr2	3	C	7	..C...,			X			X
+chr2	4	G	7	.G....,			X			X
+chr2	5	G	7	...N..,			X			X
+chr2	6	A	7	..T...,			X			X
+chr2	7	T	8	...C...,			X			X
+chr2	8	A	8	..A....,			X			X
+chr2	9	C	9	.GA..N..,			X			X
+chr2	10	T	9	........,			X			X
+chr2	11	C	10	.>>..T...,			X			X
+chr2	12	G	10	.N..G....,			X			X
+chr2	13	A	11	....A..T..,			X			X
+chr2	14	G	11	..N.......			X			X
+chr2	15	C	11	A.....NG..			X			X
+chr2	16	T	11	...C.....G			X			X
+chr2	17	C	12	G......TN..			X			X
+chr2	18	A	12	N......G..A			X			X
+chr2	19	A	13	.......NN...			X			X
+chr2	20	C	13	..GT.......N			X			X
+chr2	52			X			X	T	5	.N..,
+chr2	53			X			X	A	5	....,
+chr2	54			X			X	T	5	....,
+chr2	55			X			X	T	5	....,
+chr2	56			X			X	C	5	....,
+chr2	57			X			X	T	5	....,
+chr2	58			X			X	T	6	.N...,
+chr2	59			X			X	A	6	.....,
+chr2	77			X	C	6	.G...,			X
+chr2	78			X	G	6	..N..,			X
+chr2	79			X	T	7	..N...,			X
+chr2	80			X	C	7	.G....,			X
+chr2	81			X	G	7	...A..,			X
+chr2	82			X	A	8	...G...,			X
+chr2	83			X	A	8	...T...,			X
+chr2	84			X	T	8	..A....,			X
+chr2	85			X	G	8	.GA....,			X
+chr2	86			X	C	9	........,			X
+chr2	87			X	G	9	....T...,			X
+chr3	60			X			X	C	6	...G.,
+chr3	61			X			X	T	6	..N..,
+chr3	62			X			X	C	6	...A.,
+chr3	63			X			X	C	7	.N....,
+chr3	64			X			X	A	7	...G..,
+chr3	65			X			X	T	7	...AA.,
+chr3	66			X			X	A	7	....N.,