Mercurial > repos > jjohnson > contig_annotation_tool

comparison cat_bins.xml @ 1:86cd2e70b0dc draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit 2ed43d093253670323e67fda6db0cbb2ece98aad-dirty
author jjohnson
date Sun, 24 Nov 2019 22:35:05 -0500
parents ad7507073c3f
children 9a01840eac52
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0:ad7507073c3f 1:86cd2e70b0dc
1 <tool id="cat_bins" name="CAT bins" version="@VERSION.0"> 1 <tool id="cat_bins" name="CAT bins" version="@VERSION@.0">
2 <description>annotate with taxonomic classification</description> 2 <description>annotate with taxonomic classification</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="requirements" /> 6 <expand macro="requirements" />
48 <assert_contents> 48 <assert_contents>
49 <has_text text="1639" /> 49 <has_text text="1639" />
50 </assert_contents> 50 </assert_contents>
51 </output> 51 </output>
52 </test> 52 </test>
53 <test>
53 <param name="mags" ftype="fasta" value="genome2.fna,genome3.fna"/> 54 <param name="mags" ftype="fasta" value="genome2.fna,genome3.fna"/>
54 <expand macro="test_catdb"/> 55 <expand macro="test_catdb"/>
55 <param name="select_outputs" value="contig2classification"/> 56 <param name="select_outputs" value="contig2classification"/>
56 <output name="contig2classification"> 57 <output name="contig2classification">
57 <assert_contents> 58 <assert_contents>