Mercurial > repos > jjohnson > contig_annotation_tool

comparison test-data/contigs.fasta @ 0:ad7507073c3f draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
author jjohnson
date Sun, 24 Nov 2019 21:56:00 -0500
parents
children 18ece3d5bcde
comparison
equal deleted inserted replaced
-1:000000000000 0:ad7507073c3f
1
2 >contig_9952
3 TGGTTATGTACGCAGACAGCTTACTCCTCCTCGGAGACCACTCGCGGTACTCTATTCCCTCCACGGTTGCGAGGCGCTCGCCGTAGATCCGCTTCCCGGG
4 ACAGGCAGACAGGGTGTATAGCCTCCCCCTCTCGGAAAAAACCCCGGGCACGCGGTCCAAAGACTCCATGCCCGTAACAACGCCGTGGTTTTAGAAATAA
5 TCTGTGCCGTCGGTTGCAAACCCTAAATACAGGGGGATATCAATGCGGTTGCATGGATATCCACATCCTTCGTGAGATCGCCGACGCAGTTCAGGCGGCG
6 GTATCTCTCATACCCGACCCCTGCAGCAGGGGCAACGAGATATGCATGGGCAACGACGGCACACCCACATCCGAGATAGACAAAGTGGCTGAGAACGCGG
7 TGCTCGGGTACATAGAGTCCAACCGCCTGGCTCTGAACGTGCTCAGCGAAGAGATAGGCTTCGTGGACAACGGCGCGTCGGAGGTTCTGGTCCTCGATCC
8 CATCGATGGGACAAGCAATTCAGTGGCCGAGATACCTTTCTATACGATATCCATGGCCGTCGGCAAGGATTCGCTCTGCGGCATGCACACGGCCTACATC
9 AGGAACCTGGCGACAGGGGACGAGTTCTGGGCGCACAAAGGGGATGGCGCTTATTACAACGGAAGGAGGATAAACGTCAGGAAGCCGGATTTCTCCAAAC
10 TGTTCGCCCTTATATACATGGGGAACGCCGCTGTCGATGAAGCGTTCGCCCTTGCAAAGAACGTCAAGACCTCCCGCTCCATGGGCTGCGCCTCCCTTGA
11 GATGACGCTCGTGGCACTAGGACACGCCGATATCTATTACATGAACACCTACCGTTACAACCGTGCCGTCAGGACTGTGGACATCGCCGCCAGCGCCCTG
12 ATACTCAGGGAGGCGGGCGGCGAGATATTCGATATCGGCGGCAACAAGCTGGATATGCCGCTGGACAACGCTTACCACGCAAGCTTCGTGGCGTGCTCCT
13 GCAAAGAGGTATTCGACCACATCATGAGGGCCCACATCGAGGAGCACGGCGCTACGCGTTACGGGATATACGCCAACGAGACCGTCCCCGGGGCGGCCGA
14 GTATGTGAGGAGGGCGTACGATGCTTTGAGGGGGGAGAAGGTAACCCTCGACACGGCGGCCGCCAGGCTGATCGGGGCGGAAGGCGTGCCTATTTCGGAG
15 ATCGAGGCGGACATCGTCGTGGTGATAGGAGGGGACGGCACGATACTCAGGGCGCTCAAGAAGACGGATGCCGCCGTGATAGGGATCAACGCCGGAGGCG
16 TGGGGTTCCTGGCCGAGGTCGAGCCGGACGAGATAGAGGAGAGCATATCCCGCATCAGGCGCGGAGAGTACTCGGTTGAGGAGAGGATCAAGCTCAGGAC
17 TTTTTACGAGGGGGAATATCTCTCGGAGGCCGTGAACGAGACAGTGATACACACTGATTCCGTGGCGAAGATCAGGCAGTTCAAGATATATGTCAACGAA
18 CACCTGGCAACGGAGGTCCGCGCGGACGGCATAATCATCTCGACGCCCACAGGCTCCACCTGCTACGCCATGAGCCTCGGCGCGCCCATAACCGACCCGG
19 GGGTCGGAGCTTTCCTGATAGTCCCCATGGCGGCGTTCAAGTTCGCTTCCCGTCCGTTCGTCGTTCCCTATACGGCGAAGATAACCGTCGAGGCGGTCAT
20 GGACAAGGGCTGCCTCATCGTGGTGGACGGCCAGCACGAGTACCCGATGAGGGGAGGGACGCGGGCGGAATTCTCGCTTTCCGACAACCTCGCCAAATTC
21 TCGGCCCCGGCGTTCCTGGCATCGACGGGCATCTCGAAGTAGATCTCGCCGCCCATCATGTTGATGTCGGCCTTAAAAGGTAAAGAAAGCCAGATGGCGT
22 TCGAGACATCGGAGTCGTCCAGCTCGGCGAAGTAATCGCCGCTCGTCGTGACAATCTTCATTCTGCTCAAAGCGCCACCCGGCCGTCGGTTCAGTTCTTT
23 TTCTTCTTTTCGAAGAGCTTCCTGATCTCCCTGCCCGTGACCTCGATCTGGAGGTCCTTCTCCTTCTCCTCCATTGCCTTCAGGCCCTTCAGGTCGTTGG
24 CCCATTCGGAGGTCCAGTCGGCTTTGAATTTTCCGGATTCGATGTCGTCCAGAATCTTCTTCATGCCCTTCTCGGACTCTTCGGTGATCACCAGGTCCCT
25 CCTGGTAAGGCCTCCGTACTCGGCAGTGTTGGAAACGACGTGCCACATCTTCTCGAAACCGCCCTCGTTTATGAGGTCGACGATGAGCTTCGCCTCATGG
26 CATACTTCGAAGTAGGCCATTTCGGGAGGGTATCCTCCCTCGACCAGGGTCTTGAATCCCGACTTTATGAGGCCGGTGGTCCCTCCGCACAGCACGGCCT
27 GCTCTCCGAACAGGTCTGTGAGCGTCTCGTTGTCGAAAGTGGTCTCGAAGACGCCGGCGCGGGTGGCTCCGAGCCCCTTTGCAAGTGCAAGGGCGATCTT
28 CTTGGCGTTGCCGGTATAGTCCTGGTGGACGCAAACGAGGGCCGGAACTCCGAATCCCTCGACGAACACATCCCTTTCTTTGTCCCCGGGGGCCTTGGGA
29 GCCATCATTATGACGTCGATGTTTTTCGGAGGAACGATGGTCTTGTAGGTCACAGCGAAACCGTGGGCGAACTCAAGTGCGCAGCCCTCCCTGATGTTGG
30 GCTCGACGAATTCTTTGTATACCTTTGGCTGGACCTCGTCGGGCAGAAGCATCATGATGACGTCCGCGGTCTTGGCGGCCTCGGCGAAATCTACGACCTT
31 GAAGCCGTCCTCTTTCGCTTTGTTCCATGATCTTCCGTCTTTCCTGAGCCCGATCACTACGTTGAGGCCGGAGTCCCTGAAGCACAGGGCCTGCGCTCTC
32 CCCTGGGATCCGTAGCCCATGACGGCGACCGTTTTTCCTTTAAGGACATCTATGTCCACATCTGCATCGTGGTAAATCTTCATTATATCCACCTGTTTAG
33 AGGTCCAACTGCTTTATAGACTAAAAGGTATCGTTCCCGCTCCGACATATAGGTCAGTTCAGTACTGGCAGCGTCCTTTGACCAGGGCCTGATTCGGATT
34 GGCAGGCAGCATGGGCAACACGTCCTCCTCGGGATCGATGTGGATGTCCAGCAGGCACGTCTCGCCGCTGTCTATTGCGGTCTTCAGGGCGTCGGCTATC
35 TCTCCCGGCTTCTCGACCAGCATTCCTCTGGCCCCGTAGGCCTCGGCTATCTTGGAGAAGTCCGGGTCGGCGCCAAGCTCGGTCTCGCTGTACCTCTTGT
36 TCCAGAACAGCTTCTGCCACTGTTTGACCATTCCCAGCCATCCGTTGTTCAGCAGGACTATGACGACCGGCAGGTCCTCGGCCACCGAGGTGGCCAGCTC
37 CTGTTGGACCATCTGGAATCCCCCGTCCCCTGTTATGGTCAGGACGGTGCTGTCGGGCTTGGCGGCCTTCGCCCCTATGGCGGAGGGGAGCCCGAAACCC
38 ATCGTGCCGAAGCTTCCCGAGGAGAGGAGCTGTCTGGGCCTGTGGACGTGCAGATGGTGCATGGCCCACATTTGGTTCTGTCCCACGTCGGTGGTGACTA
39 TCATGTCGTCGTCCTTGTCGATCAGCCTGTTGATCTCGTATATGACCTTCTGAGGGACGATCGGTGTAAGGTCTATGTCGATCTTGCACCTGCAACGCCT
40 CCTGTACTCCGCATAGGTGCTGTTCCAGTCGGCATGGGTATCCCTGTATCCGGAGAGCCCGTCGATGAGCGCCGCGGTACCCTTCTTAGCATCGCAGAGA
41 AGGTTGACGTCGTTGTTCTTGTGCTTGTCGAACTCCGTCGCGTCTATGTCTATCTGGACGACCCTGCATGCGCCGTCGAACCTGGTGTGGGGGCTGAACG
42 TCCTGTCCGAGAACTTCGTGCCTATGGCTATTACCAGGTCGGCGTTGCGGAAAGTATCGAGGGCGCACATCTTGCCGTGCATCCCCAAGGGGCCCAGGCT
43 GAGCGGGTGCTCGGTGGACATGGCACCCAATCCCATGAGCGTGAAGACCGCCGGCGCGCCGATGAGCTCTGCGAGCCTCGTAACTTCCTCGGACGCGTTC
44 GCGCTTATCGTTCCGCCGCCGATCAGCAGGACGGGCCTCTGCGCTTCCTTGATCCATTGGACCGCGGTGCCCAGTTCGGACATGTCCTCCCTGGGCTCCT
45 TGATCCCGTACGAGATGCCCAGGAGGCTCTCGTCGATCTCCGAGTTCATCTGGTCTGAGGGGAGGTCGATGTGGACAGGCCCCGGTCGCCCGGTCTGGCA
46 CATCTTCCATGCCTCGTCCACCGCATGGGGCAGCCTGTTGACGTCTAGGACCCTGAAGTTGTGCTTCGTTATAGGCATGAGGAGGCTGTACGCGTCCACT
47 TCCTGGAAAGCGCCGAGCCCCAGGGACCCGGTTCCGACCTGTCCGGTAAGTGCCAGCATGGGAGTTGAGTCCGCATACGCCGTGCCTATGCCGGTGATCA
48 TGTTGGTGGCACCGGGCCCGCTGGTGGCCATGCAGACGCCCGGCCTCCCGCTGGCCCTGGCATATCCGTCTGCCATGTGGGCGGCGCACTGCTCGTGGCG
49 TACTAGGACATGGTTTATCGATGAGTTCATTATCTCGTCGTAGATCGAGATTACGCTTCCGCCCGGATATCCGAACATGGTCTCGACACCTCTGTCCTCC
50 AGCATTTGGAGCAATGCTCTGTTTCCTTTCATGGTTGGTCTCCGGCGACGTATCGCGCTTGTTTTTTATAATTCTATTTGGAAAAGCGCGCCGAAACGCG
51 CCAGCGGAAGAAGTTTATGTATACGGGGGCCATATGCCCACGCAGGTGTTTCATGGCTGTAATAAAGGTCGGTATCAACGGATTCGGAACCATAGGGAAA
52 AGGGTCGCCTCCGCAGTGAGCGCACAGGATGACATGGAAGTCGTAGGTGTGACGAAGACCCGCCCGTCCTTCGAGTCGGAGGTCGCAAGGTACAGGGGAT
53 TCGACCTGTACGCGCCTCAGAAAAGCGTCGAACTGTTCGACAAAGCGAACGTGCCGGTCGGGGGGACCGTCGAAGACCTCTGCGGCAAGGTAGACATCAT
54 GGTCGACTGCACGCCCGGAAACGTAGGGCAGGAATACAAGGCGATGTACGCCAAAGCAGGCATAAAGGCGATATTCCAGGGAGGGGAGGACCACAGCCTG
55 ACGGGGATATCCTTCAACTCCACCGCCAACTACAAGGAGTCCTGGGGCGCCCAGTTCTCCCGTGTCGTTTCTTGCAACACCACGGGGCTGCTGAGGACGC
56 TCTACCCCATAGACCGCGAGTTCGGTATCGAGAAGGCGTACGTAACGTTGGTCAGAAGGGCCGCGGACCCCGGTGACAGCAAGAACGGGCCGATCAACGG
57 GCTGGAGCCCACCGTCAAGCTGCCGACCCACCACGGGCCGGACGTCCAGAGCATCATGCCATGGGTCAACATCAACACCATGGCGATAAAGGCCTCCACT
58 ACGTTGATGCACATGCACACGGTCACGCTGGAGCTGAAGAACTCCGCTTCCACCGAGGCCGCGGTCGAAGCGATAAGGAACTCCTCGCGCGTCAGGATGG
59 TGGACGCGGCGTCCGGCATCAGGTCCACGGCGGAGGTCATGGAGCTGTCGAGGGACCTGGCCAGGGACAGGTCCGACATGTACGAGATCGTGGTATGGGA
60
61 >contig_38063
62 CTATCTCCTCAGGAGGTCTGGGAATCTCTGATCGGGAAGAACAGTAACTACCGCATCATAGTCGTGGACCTCAATCTGACCCGTGTGCTGTTCGGCATGA
63 TAGTGGGCGCCGGCCTGGCGGTGGCCGGTGCGGTCATGCAGGCCCTGTTCAAGAACCCGATGGCCTCGCCTTATACTCTCGGGCTCTCGTCAGGCGCCGC
64 ATTGGGCGCCGCATTGGGGATTCTCTTCCCTCTTTCGTTCGTACCTGAGGTCGCATCGGTCCCAATCCTGGCTTTCGTTTTCTGTCTGGGGACCATGTTC
65 CTCGTGTACTCTATTGCCAGAGTGGGCAACCAGACGCACATGGAGACTCTTCTGCTGGCCGGAATAGCCGTAGCGGCATTGGCGCAGGCGGCGGTCTCCC
66 TGCTCACGTACATAGCGGGCGAGAGCATCACGGAGATAGTCTTCTGGGGAATGGGCAGCCTGACCGTCAGCCTCCCATGGGTCAAGATCCCGATAGTGCT
67 GGTCCTCAGCGCCGTGGGCATATTCGCAATGCTCTACTACGCCAAGGACCTGAACGCCATGATGCTGGGGGACGCCCACGCCATGGACCTTGGAATAGAC
68 GTAAAAAAGACAAGGCTGGCACTGTTGATCGCCTCGTCTCTCGTCACCGCGGCTGCGGTATGTTTCGTGGGGACCATCGGCTTCGTAGGCCTTGTGATCC
69 CGCACATACTCAGGATACTTCTTGGTCCGGACAACCGTCTGCTTCTGCCGATGTGCGTGCTGACCGGAGGGATATATCTTGTAGGATGCGACTATCTGGC
70 ACATCTCTTCGCCCAATCTCTGGGCGTCATGCCCATAGGCATAGTGACATCTCTGATAGGCGCCCCGTATTTCATCTATCTGCTCAGGAGAAGAAAAAAG
71 GAGGTGGGATGGGTATGAGCCTGGATATCCGTGACTTATTCTACAATTACGATGGGAAGCCTGTTCTCAAAGACGTTTCGTTCCTGGTCAAGGAAGGAGA
72 GGTCCTGGGGATACTGGGGCCCAACGGATGCGGAAAGACGACCCTGCTGGGCAATCTGAACAGGAATCTGAGCCCCAAAGGCGGATGCGTGCTTCTGGAC
73 GGGGAGGACCTTCACAATTACAAGAAAAAAGACATCGCGAAGGAGATAGCGGTGGTTCCGCAGGACAGTCGCGTAGGTTTCTCGTTCACCGTAAGAGAGA
74 TCGTCTCCATGGGCAGGATGCCATTCCAGGACGCCTTCCAGGGAGACTCCTCGGAAGACCTCAGGATAATCGAAGACGCGATGAGGAAGACCAACGTACT
75 GGATATGGCAGACCGTTACGTGAACACCATGAGCGGCGGGGAAAGGCAGAAGGTCATAATCGCCAGGGCCATGGCGCAGACGCCCAAGATACTGCTGATG
76 GACGAGCCC
77
78 >contig_44250
79 GGTGATGTACTGGGGCTTGTAGGCTACTTTGACCTTTGCGTCTATCTTGCCGCCGTCTGGAGGGATCTCTCCGGCCAGCATCTTTACGAAAGTGGTCTTT
80 CCTGTGGCGTTGGGACCGACGACCCCGACGGATTCCCCCATCTTTATGGAACCGCCGACGACATCCAAAGTGAACTCTCCGAAGTCCTTGGACAGGCCCT
81 CGAAGGAAAGCAGGTCGGAAGTGACCCAGTCGCTCCTGGGAGGAGACGCGAAGAACTCTATCGGCCTATCCCTGAAACGGATATTCTCTTCGGGAAGGTA
82 ACCGTCCAGATATACGTTTATGGCGGTCCTGACCTGTCTTGCAAGAGTGAACACGCCGTACGCCCCCTCGGTACCGTATACAACGCTGACGATGTCGGCG
83 AGGAAATCGAGTATGGCAAGATCGTGTTCTATCACGACCACCTGCTTTTCTGCGCTGAGTTCTTTGATGATGCGTGCCATCCTGATCCTCTGGTAGATGT
84 CAAGGTACGAGGTGGGCTCGTCGAAGAAGTATACGTCCGCGTCCTTCATGACCGTGGCAGCCATGGCGACCCTCTGAAGCTCTCCTCCTGAAAGTTTCTT
85 TATATCCCTGTCCAGAAGCTCGGTCAGCTCGAACATGATGGCGGCCTCCTCGAGTGTCAGGCGGCCTTTTATGCCGGAAAGCAGGTCCTTCACGGGCCCC
86 GATGCGGCTTTGGGTATGAGGTCCACGTACTGTGGCTTTATGGCCGTCCTCACCTTGCCGGCGTAGACGTCCGTGAGATAGGATTTGACCTCGGTACCGT
87 CGTAGTGCTGCAGCACTTCCTCTTTGGATGGAGGTTTCTCATAGTTGCCCAGGTTGGGGACGAGTTCCCCGGAAAGTATCTTGATCGCCGTGGATTTTCC
88 GATCCCGTTCGGTCCAAGTATGCCCGTGACCATGCCTTTCTTCGGCACCGGGAGCCTATAGAGGCGGAAGGCGTTCTCGCCGTACTGGTGGACCATCTCC
89 GTCTTCAGCTCGTCGGCCAGGCCTATGATCTTTATGGCGTCGAACTGGCATTTGTTGACGCATATCCCGCATCCCTGGCACAGGGATTCGGATATGATGG
90 GCTTGCCCCTCTCGCCGAACACTATGCATTCCACGCCCGTTCTGACCAACGGGCAGAACTTATAGCATTCCTTGTTGCATTTTCTGTTCTGGCATCTGTC
91 CTGCAGGACGGCCGCAATACGCATGTCCCCGCTTAGACCGATTTAAGATATAACCTTTAAGGATGGTATCGCAGATAAGCTGATAAGGGAAGACGGAGAC
92 AGATGGGCATGGCCGAAGCGGATGGGACCACCGAGGACGTCAGGATACTTACGGGCGACTACAGGAGGGCGATAAGGCATCTCTCCATACCGATAGCCGT
93 GGCTCTTGCGATACAGCATATCAACATACTCGTAGACACGTTCTGGGTCGCGGGCCTGGGGGCGGACCCGATGGCTTCAATAAGCATAGTATACCCGGTT
94 TTCGCCACGGTCATGGGCATCGGAAGCGGGCTGGGGATCGGTGCTTCTTCCGCGATAGCCAGAAGCATCGGGCATAACAGGAGGAAGGAAGCCGGCACGA