diff data_manager_conf.xml @ 0:f59e7e242bde draft

planemo upload commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
author jjohnson
date Sun, 24 Nov 2019 21:54:57 -0500
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data_manager_conf.xml	Sun Nov 24 21:54:57 2019 -0500
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+<?xml version="1.0"?>
+<data_managers>
+  <data_manager tool_file="data_manager/data_manager_cat.xml" id="data_manager_cat" >
+    <data_table name="cat_database">  <!-- Defines a Data Table to be modified. -->
+      <output> <!-- Handle the output of the Data Manager Tool -->
+        <column name="value" /> <!-- columns that are going to be specified by the Data Manager Tool -->
+        <column name="name" />  <!-- columns that are going to be specified by the Data Manager Tool -->
+        <column name="database_folder" output_ref="out_file" >
+          <move type="directory" relativize_symlinks="True">
+            <src >${database_folder}</target>
+            <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">CAT/${database_folder}</target>
+          </move>
+          <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/CAT/${database_folder}</value_translation>
+          <value_translation type="function">abspath</value_translation>
+        </column>
+        <column name="taxonomy_folder" output_ref="out_file" >
+          <move type="directory" relativize_symlinks="True">
+            <src >${taxonomy_folder}</target>
+            <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">CAT/${taxonomy_folder}</target>
+          </move>
+          <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/CAT/${taxonomy_folder}</value_translation>
+          <value_translation type="function">abspath</value_translation>
+        </column>
+      </output>
+    </data_table>
+  </data_manager>
+</data_managers>