Mercurial > repos > jjohnson > defuse
comparison defuse.xml @ 7:1ea6445491d4 draft
Update to deFuse version 0.6.0
| author | Jim Johnson <jj@umn.edu> |
|---|---|
| date | Mon, 07 Jan 2013 14:52:26 -0600 |
| parents | 6e30713cefb0 |
| children | 57841f58676f |
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| 6:6e30713cefb0 | 7:1ea6445491d4 |
|---|---|
| 1 <tool id="defuse" name="DeFuse" version="1.5"> | 1 <tool id="defuse" name="DeFuse" version="1.6"> |
| 2 <description>identify fusion transcripts</description> | 2 <description>identify fusion transcripts</description> |
| 3 <requirements> | 3 <requirements> |
| 4 <requirement type="package" version="0.5.0">defuse</requirement> | 4 <requirement type="package" version="0.6.0">defuse</requirement> |
| 5 <requirement type="package" version="0.1.18">samtools</requirement> | |
| 5 <requirement type="package" version="0.12.7">bowtie</requirement> | 6 <requirement type="package" version="0.12.7">bowtie</requirement> |
| 7 <requirement type="package" version="2012-07-20">gmap</requirement> | |
| 6 <requirement type="package" version="34x10">blat</requirement> | 8 <requirement type="package" version="34x10">blat</requirement> |
| 7 <requirement type="package" version="34x10">fatotwobit</requirement> | 9 <requirement type="package" version="34x10">fatotwobit</requirement> |
| 8 </requirements> | 10 </requirements> |
| 9 <command interpreter="command"> /bin/bash $shscript </command> | 11 <command interpreter="command"> /bin/bash $shscript </command> |
| 10 <inputs> | 12 <inputs> |