# HG changeset patch
# User jjohnson
# Date 1598467371 14400
# Node ID 7556b19daa485dd8a1953ec36e1105304504c6b2
# Parent  0172dfa08216ea39d11f6bf7b6a98a6004fcd845
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/encyclopedia/tools/encyclopedia commit dd611a143e4e003a5fb085cdf93ae477cc5ea0b1"

diff -r 0172dfa08216 -r 7556b19daa48 encyclopedia_walnut.xml
--- a/encyclopedia_walnut.xml	Fri Aug 21 16:13:00 2020 -0400
+++ b/encyclopedia_walnut.xml	Wed Aug 26 14:42:51 2020 -0400
@@ -9,7 +9,7 @@
         @LINK_SCAN_INPUT@
         @LINK_FASTA_INPUT@
         @LINK_TARGET_FASTA@
-        EncyclopeDIA -Djava.awt.headless=true -Xmx12g -walnut
+        EncyclopeDIA -Djava.awt.headless=true -Xmx\$[ \${GALAXY_MEMORY_MB:-20480} / 1024 ]g -walnut
         @SCAN_INPUT@
         @FASTA_INPUT@
         @TARGET_FASTA@
@@ -65,7 +65,7 @@
         <test>
             <param name="scan_input" ftype="mzml" value="BCS_hela_narrow_3_1.mzML"/>
             <param name="fasta" ftype="fasta" value="uniprot_tiny_human.fasta"/>
-            <param name="select_outputs" values="log,features,pecan"/>
+            <param name="select_outputs" value="log,features,pecan"/>
             <output name="features" ftype="tabular">
                 <assert_contents>
                     <has_text text="LHYNEGLNIK"/>