Mercurial > repos > jjohnson > ensembl_variant_report

annotate test-data/GRCh38_X.83.gtf @ 2:f87fe6bc48f4 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit 6b6e5c13531bf909c4c70b7f8f9e28b4206d9068-dirty
author jjohnson
date Mon, 18 Mar 2019 21:43:34 -0400
parents 9f4ea174ce3d
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
1 #!genome-build GRCh38.p5
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
2 #!genome-version GRCh38
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
3 #!genome-date 2013-12
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
4 #!genome-build-accession NCBI:GCA_000001405.20
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
5 #!genebuild-last-updated 2015-10
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
6 X havana gene 253743 255091 . + . gene_id "ENSG00000228572"; gene_version "7"; gene_name "LL0YNC03-29C1.1"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; havana_gene "OTTHUMG00000046372"; havana_gene_version "2";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
7 X havana transcript 253743 255091 . + . gene_id "ENSG00000228572"; gene_version "7"; transcript_id "ENST00000431238"; transcript_version "7"; gene_name "LL0YNC03-29C1.1"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; havana_gene "OTTHUMG00000046372"; havana_gene_version "2"; transcript_name "LL0YNC03-29C1.1-001"; transcript_source "havana"; transcript_biotype "unprocessed_pseudogene"; havana_transcript "OTTHUMT00000107057"; havana_transcript_version "2"; tag "basic"; transcript_support_level "NA (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
8 X havana exon 253743 253846 . + . gene_id "ENSG00000228572"; gene_version "7"; transcript_id "ENST00000431238"; transcript_version "7"; exon_number "1"; gene_name "LL0YNC03-29C1.1"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; havana_gene "OTTHUMG00000046372"; havana_gene_version "2"; transcript_name "LL0YNC03-29C1.1-001"; transcript_source "havana"; transcript_biotype "unprocessed_pseudogene"; havana_transcript "OTTHUMT00000107057"; havana_transcript_version "2"; exon_id "ENSE00001702291"; exon_version "1"; tag "basic"; transcript_support_level "NA (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
9 X havana exon 254937 255091 . + . gene_id "ENSG00000228572"; gene_version "7"; transcript_id "ENST00000431238"; transcript_version "7"; exon_number "2"; gene_name "LL0YNC03-29C1.1"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; havana_gene "OTTHUMG00000046372"; havana_gene_version "2"; transcript_name "LL0YNC03-29C1.1-001"; transcript_source "havana"; transcript_biotype "unprocessed_pseudogene"; havana_transcript "OTTHUMT00000107057"; havana_transcript_version "2"; exon_id "ENSE00001655436"; exon_version "1"; tag "basic"; transcript_support_level "NA (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
10 X ensembl_havana gene 276322 303356 . + . gene_id "ENSG00000182378"; gene_version "13"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
11 X havana transcript 276322 303353 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000399012"; transcript_version "6"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-001"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058878"; havana_transcript_version "2"; tag "basic"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
12 X havana exon 276322 276394 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000399012"; transcript_version "6"; exon_number "1"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-001"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058878"; havana_transcript_version "2"; exon_id "ENSE00001489430"; exon_version "1"; tag "basic"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
13 X havana exon 281482 281684 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000399012"; transcript_version "6"; exon_number "2"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-001"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058878"; havana_transcript_version "2"; exon_id "ENSE00001306908"; exon_version "2"; tag "basic"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
14 X havana exon 284167 284314 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000399012"; transcript_version "6"; exon_number "3"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-001"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058878"; havana_transcript_version "2"; exon_id "ENSE00003594438"; exon_version "1"; tag "basic"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
15 X havana CDS 284188 284314 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000399012"; transcript_version "6"; exon_number "3"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-001"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058878"; havana_transcript_version "2"; protein_id "ENSP00000381976"; protein_version "1"; tag "basic"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
16 X havana start_codon 284188 284190 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000399012"; transcript_version "6"; exon_number "3"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-001"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058878"; havana_transcript_version "2"; tag "basic"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
17 X havana exon 288733 288869 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000399012"; transcript_version "6"; exon_number "4"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-001"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058878"; havana_transcript_version "2"; exon_id "ENSE00003789340"; exon_version "1"; tag "basic"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
18 X havana CDS 288733 288869 . + 2 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000399012"; transcript_version "6"; exon_number "4"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-001"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058878"; havana_transcript_version "2"; protein_id "ENSP00000381976"; protein_version "1"; tag "basic"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
19 X havana exon 290648 290776 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000399012"; transcript_version "6"; exon_number "5"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-001"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058878"; havana_transcript_version "2"; exon_id "ENSE00002162116"; exon_version "1"; tag "basic"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
20 X havana CDS 290648 290776 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000399012"; transcript_version "6"; exon_number "5"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-001"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058878"; havana_transcript_version "2"; protein_id "ENSP00000381976"; protein_version "1"; tag "basic"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
21 X havana exon 291499 291654 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000399012"; transcript_version "6"; exon_number "6"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-001"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058878"; havana_transcript_version "2"; exon_id "ENSE00002143117"; exon_version "1"; tag "basic"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
22 X havana CDS 291499 291654 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000399012"; transcript_version "6"; exon_number "6"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-001"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058878"; havana_transcript_version "2"; protein_id "ENSP00000381976"; protein_version "1"; tag "basic"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
23 X havana exon 293035 293218 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000399012"; transcript_version "6"; exon_number "7"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-001"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058878"; havana_transcript_version "2"; exon_id "ENSE00002167778"; exon_version "1"; tag "basic"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
24 X havana CDS 293035 293218 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000399012"; transcript_version "6"; exon_number "7"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-001"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058878"; havana_transcript_version "2"; protein_id "ENSP00000381976"; protein_version "1"; tag "basic"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
25 X havana exon 299097 303353 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000399012"; transcript_version "6"; exon_number "8"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-001"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058878"; havana_transcript_version "2"; exon_id "ENSE00001489377"; exon_version "2"; tag "basic"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
26 X havana CDS 299097 299332 . + 2 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000399012"; transcript_version "6"; exon_number "8"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-001"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058878"; havana_transcript_version "2"; protein_id "ENSP00000381976"; protein_version "1"; tag "basic"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
27 X havana stop_codon 299333 299335 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000399012"; transcript_version "6"; exon_number "8"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-001"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058878"; havana_transcript_version "2"; tag "basic"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
28 X havana five_prime_utr 276322 276394 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000399012"; transcript_version "6"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-001"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058878"; havana_transcript_version "2"; tag "basic"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
29 X havana five_prime_utr 281482 281684 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000399012"; transcript_version "6"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-001"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058878"; havana_transcript_version "2"; tag "basic"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
30 X havana five_prime_utr 284167 284187 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000399012"; transcript_version "6"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-001"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058878"; havana_transcript_version "2"; tag "basic"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
31 X havana three_prime_utr 299336 303353 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000399012"; transcript_version "6"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-001"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058878"; havana_transcript_version "2"; tag "basic"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
32 X havana transcript 276324 291537 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000484611"; transcript_version "7"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-009"; transcript_source "havana"; transcript_biotype "processed_transcript"; havana_transcript "OTTHUMT00000393211"; havana_transcript_version "1"; transcript_support_level "4 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
33 X havana exon 276324 276394 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000484611"; transcript_version "7"; exon_number "1"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-009"; transcript_source "havana"; transcript_biotype "processed_transcript"; havana_transcript "OTTHUMT00000393211"; havana_transcript_version "1"; exon_id "ENSE00001536003"; exon_version "1"; transcript_support_level "4 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
34 X havana exon 284167 284314 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000484611"; transcript_version "7"; exon_number "2"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-009"; transcript_source "havana"; transcript_biotype "processed_transcript"; havana_transcript "OTTHUMT00000393211"; havana_transcript_version "1"; exon_id "ENSE00003657744"; exon_version "1"; transcript_support_level "4 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
35 X havana exon 288733 288869 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000484611"; transcript_version "7"; exon_number "3"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-009"; transcript_source "havana"; transcript_biotype "processed_transcript"; havana_transcript "OTTHUMT00000393211"; havana_transcript_version "1"; exon_id "ENSE00003581159"; exon_version "1"; transcript_support_level "4 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
36 X havana exon 290648 290792 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000484611"; transcript_version "7"; exon_number "4"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-009"; transcript_source "havana"; transcript_biotype "processed_transcript"; havana_transcript "OTTHUMT00000393211"; havana_transcript_version "1"; exon_id "ENSE00001939272"; exon_version "2"; transcript_support_level "4 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
37 X havana exon 291499 291537 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000484611"; transcript_version "7"; exon_number "5"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-009"; transcript_source "havana"; transcript_biotype "processed_transcript"; havana_transcript "OTTHUMT00000393211"; havana_transcript_version "1"; exon_id "ENSE00002190604"; exon_version "1"; transcript_support_level "4 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
38 X havana transcript 276353 291629 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000430923"; transcript_version "7"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-010"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000393212"; havana_transcript_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "2 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
39 X havana exon 276353 276394 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000430923"; transcript_version "7"; exon_number "1"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-010"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000393212"; havana_transcript_version "2"; exon_id "ENSE00002160563"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "2 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
40 X havana exon 284167 284314 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000430923"; transcript_version "7"; exon_number "2"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-010"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000393212"; havana_transcript_version "2"; exon_id "ENSE00003594438"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "2 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
41 X havana CDS 284188 284314 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000430923"; transcript_version "7"; exon_number "2"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-010"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000393212"; havana_transcript_version "2"; protein_id "ENSP00000394848"; protein_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "2 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
42 X havana start_codon 284188 284190 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000430923"; transcript_version "7"; exon_number "2"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-010"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000393212"; havana_transcript_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "2 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
43 X havana exon 288733 288869 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000430923"; transcript_version "7"; exon_number "3"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-010"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000393212"; havana_transcript_version "2"; exon_id "ENSE00003789340"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "2 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
44 X havana CDS 288733 288869 . + 2 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000430923"; transcript_version "7"; exon_number "3"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-010"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000393212"; havana_transcript_version "2"; protein_id "ENSP00000394848"; protein_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "2 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
45 X havana exon 290648 290776 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000430923"; transcript_version "7"; exon_number "4"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-010"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000393212"; havana_transcript_version "2"; exon_id "ENSE00002162116"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "2 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
46 X havana CDS 290648 290776 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000430923"; transcript_version "7"; exon_number "4"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-010"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000393212"; havana_transcript_version "2"; protein_id "ENSP00000394848"; protein_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "2 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
47 X havana exon 291499 291629 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000430923"; transcript_version "7"; exon_number "5"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-010"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000393212"; havana_transcript_version "2"; exon_id "ENSE00001740378"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "2 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
48 X havana CDS 291499 291629 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000430923"; transcript_version "7"; exon_number "5"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-010"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000393212"; havana_transcript_version "2"; protein_id "ENSP00000394848"; protein_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "2 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
49 X havana five_prime_utr 276353 276394 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000430923"; transcript_version "7"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-010"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000393212"; havana_transcript_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "2 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
50 X havana five_prime_utr 284167 284187 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000430923"; transcript_version "7"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-010"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000393212"; havana_transcript_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "2 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
51 X havana transcript 281055 288869 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000445062"; transcript_version "6"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-005"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313973"; havana_transcript_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
52 X havana exon 281055 281121 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000445062"; transcript_version "6"; exon_number "1"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-005"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313973"; havana_transcript_version "2"; exon_id "ENSE00001750899"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
53 X havana exon 281482 281684 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000445062"; transcript_version "6"; exon_number "2"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-005"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313973"; havana_transcript_version "2"; exon_id "ENSE00001306908"; exon_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
54 X havana exon 284167 284314 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000445062"; transcript_version "6"; exon_number "3"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-005"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313973"; havana_transcript_version "2"; exon_id "ENSE00003594438"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
55 X havana CDS 284188 284314 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000445062"; transcript_version "6"; exon_number "3"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-005"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313973"; havana_transcript_version "2"; protein_id "ENSP00000412018"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
56 X havana start_codon 284188 284190 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000445062"; transcript_version "6"; exon_number "3"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-005"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313973"; havana_transcript_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
57 X havana exon 288733 288869 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000445062"; transcript_version "6"; exon_number "4"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-005"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313973"; havana_transcript_version "2"; exon_id "ENSE00003789340"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
58 X havana CDS 288733 288869 . + 2 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000445062"; transcript_version "6"; exon_number "4"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-005"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313973"; havana_transcript_version "2"; protein_id "ENSP00000412018"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
59 X havana five_prime_utr 281055 281121 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000445062"; transcript_version "6"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-005"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313973"; havana_transcript_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
60 X havana five_prime_utr 281482 281684 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000445062"; transcript_version "6"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-005"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313973"; havana_transcript_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
61 X havana five_prime_utr 284167 284187 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000445062"; transcript_version "6"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-005"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313973"; havana_transcript_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
62 X ensembl_havana transcript 281192 303356 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381657"; transcript_version "7"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-002"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058879"; havana_transcript_version "2"; tag "basic"; transcript_support_level "5 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
63 X ensembl_havana exon 281192 281684 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381657"; transcript_version "7"; exon_number "1"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-002"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058879"; havana_transcript_version "2"; exon_id "ENSE00001489388"; exon_version "1"; tag "basic"; transcript_support_level "5 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
64 X ensembl_havana exon 284167 284314 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381657"; transcript_version "7"; exon_number "2"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-002"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058879"; havana_transcript_version "2"; exon_id "ENSE00003594438"; exon_version "1"; tag "basic"; transcript_support_level "5 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
65 X ensembl_havana CDS 284188 284314 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381657"; transcript_version "7"; exon_number "2"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-002"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058879"; havana_transcript_version "2"; protein_id "ENSP00000371073"; protein_version "2"; tag "basic"; transcript_support_level "5 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
66 X ensembl_havana start_codon 284188 284190 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381657"; transcript_version "7"; exon_number "2"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-002"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058879"; havana_transcript_version "2"; tag "basic"; transcript_support_level "5 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
67 X ensembl_havana exon 288733 288869 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381657"; transcript_version "7"; exon_number "3"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-002"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058879"; havana_transcript_version "2"; exon_id "ENSE00003789340"; exon_version "1"; tag "basic"; transcript_support_level "5 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
68 X ensembl_havana CDS 288733 288869 . + 2 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381657"; transcript_version "7"; exon_number "3"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-002"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058879"; havana_transcript_version "2"; protein_id "ENSP00000371073"; protein_version "2"; tag "basic"; transcript_support_level "5 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
69 X ensembl_havana exon 290648 290776 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381657"; transcript_version "7"; exon_number "4"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-002"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058879"; havana_transcript_version "2"; exon_id "ENSE00002162116"; exon_version "1"; tag "basic"; transcript_support_level "5 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
70 X ensembl_havana CDS 290648 290776 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381657"; transcript_version "7"; exon_number "4"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-002"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058879"; havana_transcript_version "2"; protein_id "ENSP00000371073"; protein_version "2"; tag "basic"; transcript_support_level "5 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
71 X ensembl_havana exon 291499 291654 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381657"; transcript_version "7"; exon_number "5"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-002"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058879"; havana_transcript_version "2"; exon_id "ENSE00002143117"; exon_version "1"; tag "basic"; transcript_support_level "5 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
72 X ensembl_havana CDS 291499 291654 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381657"; transcript_version "7"; exon_number "5"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-002"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058879"; havana_transcript_version "2"; protein_id "ENSP00000371073"; protein_version "2"; tag "basic"; transcript_support_level "5 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
73 X ensembl_havana exon 293035 293218 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381657"; transcript_version "7"; exon_number "6"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-002"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058879"; havana_transcript_version "2"; exon_id "ENSE00002167778"; exon_version "1"; tag "basic"; transcript_support_level "5 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
74 X ensembl_havana CDS 293035 293218 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381657"; transcript_version "7"; exon_number "6"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-002"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058879"; havana_transcript_version "2"; protein_id "ENSP00000371073"; protein_version "2"; tag "basic"; transcript_support_level "5 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
75 X ensembl_havana exon 299097 303356 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381657"; transcript_version "7"; exon_number "7"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-002"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058879"; havana_transcript_version "2"; exon_id "ENSE00001489383"; exon_version "2"; tag "basic"; transcript_support_level "5 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
76 X ensembl_havana CDS 299097 299332 . + 2 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381657"; transcript_version "7"; exon_number "7"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-002"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058879"; havana_transcript_version "2"; protein_id "ENSP00000371073"; protein_version "2"; tag "basic"; transcript_support_level "5 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
77 X ensembl_havana stop_codon 299333 299335 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381657"; transcript_version "7"; exon_number "7"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-002"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058879"; havana_transcript_version "2"; tag "basic"; transcript_support_level "5 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
78 X ensembl_havana five_prime_utr 281192 281684 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381657"; transcript_version "7"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-002"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058879"; havana_transcript_version "2"; tag "basic"; transcript_support_level "5 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
79 X ensembl_havana five_prime_utr 284167 284187 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381657"; transcript_version "7"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-002"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058879"; havana_transcript_version "2"; tag "basic"; transcript_support_level "5 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
80 X ensembl_havana three_prime_utr 299336 303356 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381657"; transcript_version "7"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-002"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; havana_transcript "OTTHUMT00000058879"; havana_transcript_version "2"; tag "basic"; transcript_support_level "5 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
81 X havana transcript 281194 288787 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000429181"; transcript_version "6"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-006"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313974"; havana_transcript_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
82 X havana exon 281194 281256 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000429181"; transcript_version "6"; exon_number "1"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-006"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313974"; havana_transcript_version "2"; exon_id "ENSE00001719251"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
83 X havana exon 281482 281684 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000429181"; transcript_version "6"; exon_number "2"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-006"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313974"; havana_transcript_version "2"; exon_id "ENSE00001306908"; exon_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
84 X havana exon 284167 284314 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000429181"; transcript_version "6"; exon_number "3"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-006"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313974"; havana_transcript_version "2"; exon_id "ENSE00003594438"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
85 X havana CDS 284188 284314 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000429181"; transcript_version "6"; exon_number "3"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-006"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313974"; havana_transcript_version "2"; protein_id "ENSP00000400904"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
86 X havana start_codon 284188 284190 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000429181"; transcript_version "6"; exon_number "3"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-006"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313974"; havana_transcript_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
87 X havana exon 288733 288787 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000429181"; transcript_version "6"; exon_number "4"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-006"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313974"; havana_transcript_version "2"; exon_id "ENSE00001763472"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
88 X havana CDS 288733 288787 . + 2 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000429181"; transcript_version "6"; exon_number "4"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-006"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313974"; havana_transcript_version "2"; protein_id "ENSP00000400904"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
89 X havana five_prime_utr 281194 281256 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000429181"; transcript_version "6"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-006"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313974"; havana_transcript_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
90 X havana five_prime_utr 281482 281684 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000429181"; transcript_version "6"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-006"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313974"; havana_transcript_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
91 X havana five_prime_utr 284167 284187 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000429181"; transcript_version "6"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-006"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313974"; havana_transcript_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
92 X ensembl transcript 281462 303353 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381663"; transcript_version "8"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-201"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; tag "basic"; transcript_support_level "5 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
93 X ensembl exon 281462 281684 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381663"; transcript_version "8"; exon_number "1"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-201"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; exon_id "ENSE00002204149"; exon_version "1"; tag "basic"; transcript_support_level "5 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
94 X ensembl exon 284167 284314 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381663"; transcript_version "8"; exon_number "2"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-201"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; exon_id "ENSE00003594438"; exon_version "1"; tag "basic"; transcript_support_level "5 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
95 X ensembl CDS 284188 284314 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381663"; transcript_version "8"; exon_number "2"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-201"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; protein_id "ENSP00000371079"; protein_version "3"; tag "basic"; transcript_support_level "5 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
96 X ensembl start_codon 284188 284190 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381663"; transcript_version "8"; exon_number "2"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-201"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; tag "basic"; transcript_support_level "5 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
97 X ensembl exon 288733 288869 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381663"; transcript_version "8"; exon_number "3"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-201"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; exon_id "ENSE00003789340"; exon_version "1"; tag "basic"; transcript_support_level "5 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
98 X ensembl CDS 288733 288869 . + 2 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381663"; transcript_version "8"; exon_number "3"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-201"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; protein_id "ENSP00000371079"; protein_version "3"; tag "basic"; transcript_support_level "5 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
99 X ensembl exon 290648 290776 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381663"; transcript_version "8"; exon_number "4"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-201"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; exon_id "ENSE00002162116"; exon_version "1"; tag "basic"; transcript_support_level "5 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
100 X ensembl CDS 290648 290776 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381663"; transcript_version "8"; exon_number "4"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-201"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; protein_id "ENSP00000371079"; protein_version "3"; tag "basic"; transcript_support_level "5 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
101 X ensembl exon 291499 291654 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381663"; transcript_version "8"; exon_number "5"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-201"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; exon_id "ENSE00002143117"; exon_version "1"; tag "basic"; transcript_support_level "5 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
102 X ensembl CDS 291499 291654 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381663"; transcript_version "8"; exon_number "5"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-201"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; protein_id "ENSP00000371079"; protein_version "3"; tag "basic"; transcript_support_level "5 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
103 X ensembl exon 293035 293218 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381663"; transcript_version "8"; exon_number "6"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-201"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; exon_id "ENSE00002167778"; exon_version "1"; tag "basic"; transcript_support_level "5 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
104 X ensembl CDS 293035 293218 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381663"; transcript_version "8"; exon_number "6"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-201"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; protein_id "ENSP00000371079"; protein_version "3"; tag "basic"; transcript_support_level "5 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
105 X ensembl exon 299097 299465 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381663"; transcript_version "8"; exon_number "7"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-201"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; exon_id "ENSE00001334714"; exon_version "2"; tag "basic"; transcript_support_level "5 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
106 X ensembl CDS 299097 299332 . + 2 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381663"; transcript_version "8"; exon_number "7"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-201"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; protein_id "ENSP00000371079"; protein_version "3"; tag "basic"; transcript_support_level "5 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
107 X ensembl stop_codon 299333 299335 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381663"; transcript_version "8"; exon_number "7"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-201"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; tag "basic"; transcript_support_level "5 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
108 X ensembl exon 302837 303353 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381663"; transcript_version "8"; exon_number "8"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-201"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; exon_id "ENSE00001489403"; exon_version "3"; tag "basic"; transcript_support_level "5 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
109 X ensembl five_prime_utr 281462 281684 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381663"; transcript_version "8"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-201"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; tag "basic"; transcript_support_level "5 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
110 X ensembl five_prime_utr 284167 284187 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381663"; transcript_version "8"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-201"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; tag "basic"; transcript_support_level "5 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
111 X ensembl three_prime_utr 299336 299465 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381663"; transcript_version "8"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-201"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; tag "basic"; transcript_support_level "5 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
112 X ensembl three_prime_utr 302837 303353 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000381663"; transcript_version "8"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-201"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14103"; tag "basic"; transcript_support_level "5 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
113 X havana transcript 283163 288829 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000443019"; transcript_version "6"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000058880"; havana_transcript_version "3"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
114 X havana exon 283163 283201 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000443019"; transcript_version "6"; exon_number "1"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000058880"; havana_transcript_version "3"; exon_id "ENSE00002195046"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
115 X havana exon 284167 284314 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000443019"; transcript_version "6"; exon_number "2"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000058880"; havana_transcript_version "3"; exon_id "ENSE00003594438"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
116 X havana CDS 284188 284314 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000443019"; transcript_version "6"; exon_number "2"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000058880"; havana_transcript_version "3"; protein_id "ENSP00000408558"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
117 X havana start_codon 284188 284190 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000443019"; transcript_version "6"; exon_number "2"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000058880"; havana_transcript_version "3"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
118 X havana exon 288733 288829 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000443019"; transcript_version "6"; exon_number "3"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000058880"; havana_transcript_version "3"; exon_id "ENSE00002178523"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
119 X havana CDS 288733 288829 . + 2 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000443019"; transcript_version "6"; exon_number "3"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000058880"; havana_transcript_version "3"; protein_id "ENSP00000408558"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
120 X havana five_prime_utr 283163 283201 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000443019"; transcript_version "6"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000058880"; havana_transcript_version "3"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
121 X havana five_prime_utr 284167 284187 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000443019"; transcript_version "6"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000058880"; havana_transcript_version "3"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
122 X havana transcript 283465 291639 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000415337"; transcript_version "6"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-007"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313975"; havana_transcript_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
123 X havana exon 283465 283488 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000415337"; transcript_version "6"; exon_number "1"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-007"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313975"; havana_transcript_version "2"; exon_id "ENSE00001626975"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
124 X havana exon 284167 284314 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000415337"; transcript_version "6"; exon_number "2"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-007"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313975"; havana_transcript_version "2"; exon_id "ENSE00003594438"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
125 X havana CDS 284188 284314 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000415337"; transcript_version "6"; exon_number "2"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-007"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313975"; havana_transcript_version "2"; protein_id "ENSP00000399510"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
126 X havana start_codon 284188 284190 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000415337"; transcript_version "6"; exon_number "2"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-007"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313975"; havana_transcript_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
127 X havana exon 288733 288869 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000415337"; transcript_version "6"; exon_number "3"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-007"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313975"; havana_transcript_version "2"; exon_id "ENSE00003789340"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
128 X havana CDS 288733 288869 . + 2 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000415337"; transcript_version "6"; exon_number "3"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-007"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313975"; havana_transcript_version "2"; protein_id "ENSP00000399510"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
129 X havana exon 290648 290776 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000415337"; transcript_version "6"; exon_number "4"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-007"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313975"; havana_transcript_version "2"; exon_id "ENSE00002162116"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
130 X havana CDS 290648 290776 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000415337"; transcript_version "6"; exon_number "4"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-007"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313975"; havana_transcript_version "2"; protein_id "ENSP00000399510"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
131 X havana exon 291499 291639 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000415337"; transcript_version "6"; exon_number "5"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-007"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313975"; havana_transcript_version "2"; exon_id "ENSE00001603661"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
132 X havana CDS 291499 291639 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000415337"; transcript_version "6"; exon_number "5"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-007"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313975"; havana_transcript_version "2"; protein_id "ENSP00000399510"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
133 X havana five_prime_utr 283465 283488 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000415337"; transcript_version "6"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-007"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313975"; havana_transcript_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
134 X havana five_prime_utr 284167 284187 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000415337"; transcript_version "6"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-007"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313975"; havana_transcript_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
135 X havana transcript 283479 291629 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000447472"; transcript_version "6"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-008"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313976"; havana_transcript_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
136 X havana exon 283479 283520 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000447472"; transcript_version "6"; exon_number "1"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-008"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313976"; havana_transcript_version "1"; exon_id "ENSE00001691645"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
137 X havana exon 284167 284314 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000447472"; transcript_version "6"; exon_number "2"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-008"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313976"; havana_transcript_version "1"; exon_id "ENSE00003594438"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
138 X havana CDS 284188 284314 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000447472"; transcript_version "6"; exon_number "2"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-008"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313976"; havana_transcript_version "1"; protein_id "ENSP00000405307"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
139 X havana start_codon 284188 284190 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000447472"; transcript_version "6"; exon_number "2"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-008"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313976"; havana_transcript_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
140 X havana exon 288733 288869 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000447472"; transcript_version "6"; exon_number "3"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-008"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313976"; havana_transcript_version "1"; exon_id "ENSE00003789340"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
141 X havana CDS 288733 288869 . + 2 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000447472"; transcript_version "6"; exon_number "3"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-008"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313976"; havana_transcript_version "1"; protein_id "ENSP00000405307"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
142 X havana exon 290648 290776 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000447472"; transcript_version "6"; exon_number "4"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-008"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313976"; havana_transcript_version "1"; exon_id "ENSE00002162116"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
143 X havana CDS 290648 290776 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000447472"; transcript_version "6"; exon_number "4"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-008"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313976"; havana_transcript_version "1"; protein_id "ENSP00000405307"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
144 X havana exon 291499 291629 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000447472"; transcript_version "6"; exon_number "5"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-008"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313976"; havana_transcript_version "1"; exon_id "ENSE00001740378"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
145 X havana CDS 291499 291629 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000447472"; transcript_version "6"; exon_number "5"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-008"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313976"; havana_transcript_version "1"; protein_id "ENSP00000405307"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
146 X havana five_prime_utr 283479 283520 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000447472"; transcript_version "6"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-008"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313976"; havana_transcript_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
147 X havana five_prime_utr 284167 284187 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000447472"; transcript_version "6"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-008"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000313976"; havana_transcript_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "4 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
148 X havana transcript 283734 290757 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000448477"; transcript_version "6"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-004"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000058881"; havana_transcript_version "3"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "2 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
149 X havana exon 283734 284314 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000448477"; transcript_version "6"; exon_number "1"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-004"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000058881"; havana_transcript_version "3"; exon_id "ENSE00001621688"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "2 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
150 X havana CDS 284188 284314 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000448477"; transcript_version "6"; exon_number "1"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-004"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000058881"; havana_transcript_version "3"; protein_id "ENSP00000414181"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "2 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
151 X havana start_codon 284188 284190 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000448477"; transcript_version "6"; exon_number "1"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-004"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000058881"; havana_transcript_version "3"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "2 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
152 X havana exon 288733 288869 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000448477"; transcript_version "6"; exon_number "2"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-004"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000058881"; havana_transcript_version "3"; exon_id "ENSE00003789340"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "2 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
153 X havana CDS 288733 288869 . + 2 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000448477"; transcript_version "6"; exon_number "2"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-004"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000058881"; havana_transcript_version "3"; protein_id "ENSP00000414181"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "2 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
154 X havana exon 290648 290757 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000448477"; transcript_version "6"; exon_number "3"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-004"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000058881"; havana_transcript_version "3"; exon_id "ENSE00001690275"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "2 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
155 X havana CDS 290648 290757 . + 0 gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000448477"; transcript_version "6"; exon_number "3"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-004"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000058881"; havana_transcript_version "3"; protein_id "ENSP00000414181"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "2 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
156 X havana five_prime_utr 283734 284187 . + . gene_id "ENSG00000182378"; gene_version "13"; transcript_id "ENST00000448477"; transcript_version "6"; gene_name "PLCXD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022693"; havana_gene_version "5"; transcript_name "PLCXD1-004"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000058881"; havana_transcript_version "3"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "2 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
157 X ensembl_havana gene 304529 318819 . - . gene_id "ENSG00000178605"; gene_version "13"; gene_name "GTPBP6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022694"; havana_gene_version "3";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
158 X havana transcript 304529 312463 . - . gene_id "ENSG00000178605"; gene_version "13"; transcript_id "ENST00000485332"; transcript_version "7"; gene_name "GTPBP6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022694"; havana_gene_version "3"; transcript_name "GTPBP6-003"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000467781"; havana_transcript_version "1"; transcript_support_level "2 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
159 X havana exon 311419 312463 . - . gene_id "ENSG00000178605"; gene_version "13"; transcript_id "ENST00000485332"; transcript_version "7"; exon_number "1"; gene_name "GTPBP6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022694"; havana_gene_version "3"; transcript_name "GTPBP6-003"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000467781"; havana_transcript_version "1"; exon_id "ENSE00001866313"; exon_version "2"; transcript_support_level "2 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
160 X havana exon 307732 307880 . - . gene_id "ENSG00000178605"; gene_version "13"; transcript_id "ENST00000485332"; transcript_version "7"; exon_number "2"; gene_name "GTPBP6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022694"; havana_gene_version "3"; transcript_name "GTPBP6-003"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000467781"; havana_transcript_version "1"; exon_id "ENSE00003604694"; exon_version "1"; transcript_support_level "2 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
161 X havana exon 307360 307512 . - . gene_id "ENSG00000178605"; gene_version "13"; transcript_id "ENST00000485332"; transcript_version "7"; exon_number "3"; gene_name "GTPBP6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022694"; havana_gene_version "3"; transcript_name "GTPBP6-003"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000467781"; havana_transcript_version "1"; exon_id "ENSE00003552346"; exon_version "1"; transcript_support_level "2 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
162 X havana exon 304529 305197 . - . gene_id "ENSG00000178605"; gene_version "13"; transcript_id "ENST00000485332"; transcript_version "7"; exon_number "4"; gene_name "GTPBP6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022694"; havana_gene_version "3"; transcript_name "GTPBP6-003"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000467781"; havana_transcript_version "1"; exon_id "ENSE00001878585"; exon_version "1"; transcript_support_level "2 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
163 X ensembl_havana transcript 304750 318819 . - . gene_id "ENSG00000178605"; gene_version "13"; transcript_id "ENST00000326153"; transcript_version "9"; gene_name "GTPBP6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022694"; havana_gene_version "3"; transcript_name "GTPBP6-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS75943"; havana_transcript "OTTHUMT00000058882"; havana_transcript_version "2"; tag "basic"; transcript_support_level "1 (assigned to previous version 8)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
164 X ensembl_havana exon 318439 318819 . - . gene_id "ENSG00000178605"; gene_version "13"; transcript_id "ENST00000326153"; transcript_version "9"; exon_number "1"; gene_name "GTPBP6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022694"; havana_gene_version "3"; transcript_name "GTPBP6-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS75943"; havana_transcript "OTTHUMT00000058882"; havana_transcript_version "2"; exon_id "ENSE00003711516"; exon_version "2"; tag "basic"; transcript_support_level "1 (assigned to previous version 8)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
165 X ensembl_havana CDS 318439 318787 . - 0 gene_id "ENSG00000178605"; gene_version "13"; transcript_id "ENST00000326153"; transcript_version "9"; exon_number "1"; gene_name "GTPBP6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022694"; havana_gene_version "3"; transcript_name "GTPBP6-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS75943"; havana_transcript "OTTHUMT00000058882"; havana_transcript_version "2"; protein_id "ENSP00000316598"; protein_version "5"; tag "basic"; transcript_support_level "1 (assigned to previous version 8)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
166 X ensembl_havana start_codon 318785 318787 . - 0 gene_id "ENSG00000178605"; gene_version "13"; transcript_id "ENST00000326153"; transcript_version "9"; exon_number "1"; gene_name "GTPBP6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022694"; havana_gene_version "3"; transcript_name "GTPBP6-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS75943"; havana_transcript "OTTHUMT00000058882"; havana_transcript_version "2"; tag "basic"; transcript_support_level "1 (assigned to previous version 8)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
167 X ensembl_havana exon 316914 317051 . - . gene_id "ENSG00000178605"; gene_version "13"; transcript_id "ENST00000326153"; transcript_version "9"; exon_number "2"; gene_name "GTPBP6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022694"; havana_gene_version "3"; transcript_name "GTPBP6-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS75943"; havana_transcript "OTTHUMT00000058882"; havana_transcript_version "2"; exon_id "ENSE00003733507"; exon_version "1"; tag "basic"; transcript_support_level "1 (assigned to previous version 8)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
168 X ensembl_havana CDS 316914 317051 . - 2 gene_id "ENSG00000178605"; gene_version "13"; transcript_id "ENST00000326153"; transcript_version "9"; exon_number "2"; gene_name "GTPBP6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022694"; havana_gene_version "3"; transcript_name "GTPBP6-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS75943"; havana_transcript "OTTHUMT00000058882"; havana_transcript_version "2"; protein_id "ENSP00000316598"; protein_version "5"; tag "basic"; transcript_support_level "1 (assigned to previous version 8)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
169 X ensembl_havana exon 315229 315299 . - . gene_id "ENSG00000178605"; gene_version "13"; transcript_id "ENST00000326153"; transcript_version "9"; exon_number "3"; gene_name "GTPBP6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022694"; havana_gene_version "3"; transcript_name "GTPBP6-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS75943"; havana_transcript "OTTHUMT00000058882"; havana_transcript_version "2"; exon_id "ENSE00003733593"; exon_version "1"; tag "basic"; transcript_support_level "1 (assigned to previous version 8)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
170 X ensembl_havana CDS 315229 315299 . - 2 gene_id "ENSG00000178605"; gene_version "13"; transcript_id "ENST00000326153"; transcript_version "9"; exon_number "3"; gene_name "GTPBP6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022694"; havana_gene_version "3"; transcript_name "GTPBP6-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS75943"; havana_transcript "OTTHUMT00000058882"; havana_transcript_version "2"; protein_id "ENSP00000316598"; protein_version "5"; tag "basic"; transcript_support_level "1 (assigned to previous version 8)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
171 X ensembl_havana exon 314890 315020 . - . gene_id "ENSG00000178605"; gene_version "13"; transcript_id "ENST00000326153"; transcript_version "9"; exon_number "4"; gene_name "GTPBP6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022694"; havana_gene_version "3"; transcript_name "GTPBP6-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS75943"; havana_transcript "OTTHUMT00000058882"; havana_transcript_version "2"; exon_id "ENSE00003714129"; exon_version "1"; tag "basic"; transcript_support_level "1 (assigned to previous version 8)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
172 X ensembl_havana CDS 314890 315020 . - 0 gene_id "ENSG00000178605"; gene_version "13"; transcript_id "ENST00000326153"; transcript_version "9"; exon_number "4"; gene_name "GTPBP6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022694"; havana_gene_version "3"; transcript_name "GTPBP6-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS75943"; havana_transcript "OTTHUMT00000058882"; havana_transcript_version "2"; protein_id "ENSP00000316598"; protein_version "5"; tag "basic"; transcript_support_level "1 (assigned to previous version 8)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
173 X ensembl_havana exon 314150 314217 . - . gene_id "ENSG00000178605"; gene_version "13"; transcript_id "ENST00000326153"; transcript_version "9"; exon_number "5"; gene_name "GTPBP6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022694"; havana_gene_version "3"; transcript_name "GTPBP6-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS75943"; havana_transcript "OTTHUMT00000058882"; havana_transcript_version "2"; exon_id "ENSE00003449454"; exon_version "1"; tag "basic"; transcript_support_level "1 (assigned to previous version 8)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
174 X ensembl_havana CDS 314150 314217 . - 1 gene_id "ENSG00000178605"; gene_version "13"; transcript_id "ENST00000326153"; transcript_version "9"; exon_number "5"; gene_name "GTPBP6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022694"; havana_gene_version "3"; transcript_name "GTPBP6-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS75943"; havana_transcript "OTTHUMT00000058882"; havana_transcript_version "2"; protein_id "ENSP00000316598"; protein_version "5"; tag "basic"; transcript_support_level "1 (assigned to previous version 8)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
175 X ensembl_havana exon 312766 312924 . - . gene_id "ENSG00000178605"; gene_version "13"; transcript_id "ENST00000326153"; transcript_version "9"; exon_number "6"; gene_name "GTPBP6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022694"; havana_gene_version "3"; transcript_name "GTPBP6-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS75943"; havana_transcript "OTTHUMT00000058882"; havana_transcript_version "2"; exon_id "ENSE00001793174"; exon_version "1"; tag "basic"; transcript_support_level "1 (assigned to previous version 8)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
176 X ensembl_havana CDS 312766 312924 . - 2 gene_id "ENSG00000178605"; gene_version "13"; transcript_id "ENST00000326153"; transcript_version "9"; exon_number "6"; gene_name "GTPBP6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022694"; havana_gene_version "3"; transcript_name "GTPBP6-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS75943"; havana_transcript "OTTHUMT00000058882"; havana_transcript_version "2"; protein_id "ENSP00000316598"; protein_version "5"; tag "basic"; transcript_support_level "1 (assigned to previous version 8)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
177 X ensembl_havana exon 311419 311627 . - . gene_id "ENSG00000178605"; gene_version "13"; transcript_id "ENST00000326153"; transcript_version "9"; exon_number "7"; gene_name "GTPBP6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022694"; havana_gene_version "3"; transcript_name "GTPBP6-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS75943"; havana_transcript "OTTHUMT00000058882"; havana_transcript_version "2"; exon_id "ENSE00001288218"; exon_version "1"; tag "basic"; transcript_support_level "1 (assigned to previous version 8)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
178 X ensembl_havana CDS 311419 311627 . - 2 gene_id "ENSG00000178605"; gene_version "13"; transcript_id "ENST00000326153"; transcript_version "9"; exon_number "7"; gene_name "GTPBP6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022694"; havana_gene_version "3"; transcript_name "GTPBP6-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS75943"; havana_transcript "OTTHUMT00000058882"; havana_transcript_version "2"; protein_id "ENSP00000316598"; protein_version "5"; tag "basic"; transcript_support_level "1 (assigned to previous version 8)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
179 X ensembl_havana exon 307732 307880 . - . gene_id "ENSG00000178605"; gene_version "13"; transcript_id "ENST00000326153"; transcript_version "9"; exon_number "8"; gene_name "GTPBP6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022694"; havana_gene_version "3"; transcript_name "GTPBP6-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS75943"; havana_transcript "OTTHUMT00000058882"; havana_transcript_version "2"; exon_id "ENSE00003654058"; exon_version "1"; tag "basic"; transcript_support_level "1 (assigned to previous version 8)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
180 X ensembl_havana CDS 307732 307880 . - 0 gene_id "ENSG00000178605"; gene_version "13"; transcript_id "ENST00000326153"; transcript_version "9"; exon_number "8"; gene_name "GTPBP6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022694"; havana_gene_version "3"; transcript_name "GTPBP6-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS75943"; havana_transcript "OTTHUMT00000058882"; havana_transcript_version "2"; protein_id "ENSP00000316598"; protein_version "5"; tag "basic"; transcript_support_level "1 (assigned to previous version 8)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
181 X ensembl_havana exon 307360 307512 . - . gene_id "ENSG00000178605"; gene_version "13"; transcript_id "ENST00000326153"; transcript_version "9"; exon_number "9"; gene_name "GTPBP6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022694"; havana_gene_version "3"; transcript_name "GTPBP6-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS75943"; havana_transcript "OTTHUMT00000058882"; havana_transcript_version "2"; exon_id "ENSE00003581203"; exon_version "1"; tag "basic"; transcript_support_level "1 (assigned to previous version 8)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
182 X ensembl_havana CDS 307360 307512 . - 1 gene_id "ENSG00000178605"; gene_version "13"; transcript_id "ENST00000326153"; transcript_version "9"; exon_number "9"; gene_name "GTPBP6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022694"; havana_gene_version "3"; transcript_name "GTPBP6-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS75943"; havana_transcript "OTTHUMT00000058882"; havana_transcript_version "2"; protein_id "ENSP00000316598"; protein_version "5"; tag "basic"; transcript_support_level "1 (assigned to previous version 8)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
183 X ensembl_havana exon 304750 305197 . - . gene_id "ENSG00000178605"; gene_version "13"; transcript_id "ENST00000326153"; transcript_version "9"; exon_number "10"; gene_name "GTPBP6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022694"; havana_gene_version "3"; transcript_name "GTPBP6-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS75943"; havana_transcript "OTTHUMT00000058882"; havana_transcript_version "2"; exon_id "ENSE00001797294"; exon_version "1"; tag "basic"; transcript_support_level "1 (assigned to previous version 8)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
184 X ensembl_havana CDS 305077 305197 . - 1 gene_id "ENSG00000178605"; gene_version "13"; transcript_id "ENST00000326153"; transcript_version "9"; exon_number "10"; gene_name "GTPBP6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022694"; havana_gene_version "3"; transcript_name "GTPBP6-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS75943"; havana_transcript "OTTHUMT00000058882"; havana_transcript_version "2"; protein_id "ENSP00000316598"; protein_version "5"; tag "basic"; transcript_support_level "1 (assigned to previous version 8)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
185 X ensembl_havana stop_codon 305074 305076 . - 0 gene_id "ENSG00000178605"; gene_version "13"; transcript_id "ENST00000326153"; transcript_version "9"; exon_number "10"; gene_name "GTPBP6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022694"; havana_gene_version "3"; transcript_name "GTPBP6-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS75943"; havana_transcript "OTTHUMT00000058882"; havana_transcript_version "2"; tag "basic"; transcript_support_level "1 (assigned to previous version 8)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
186 X ensembl_havana five_prime_utr 318788 318819 . - . gene_id "ENSG00000178605"; gene_version "13"; transcript_id "ENST00000326153"; transcript_version "9"; gene_name "GTPBP6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022694"; havana_gene_version "3"; transcript_name "GTPBP6-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS75943"; havana_transcript "OTTHUMT00000058882"; havana_transcript_version "2"; tag "basic"; transcript_support_level "1 (assigned to previous version 8)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
187 X ensembl_havana three_prime_utr 304750 305073 . - . gene_id "ENSG00000178605"; gene_version "13"; transcript_id "ENST00000326153"; transcript_version "9"; gene_name "GTPBP6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000022694"; havana_gene_version "3"; transcript_name "GTPBP6-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS75943"; havana_transcript "OTTHUMT00000058882"; havana_transcript_version "2"; tag "basic"; transcript_support_level "1 (assigned to previous version 8)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
188 X havana gene 320990 321851 . + . gene_id "ENSG00000226179"; gene_version "6"; gene_name "LINC00685"; gene_source "havana"; gene_biotype "antisense"; havana_gene "OTTHUMG00000021049"; havana_gene_version "1";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
189 X havana transcript 320990 321851 . + . gene_id "ENSG00000226179"; gene_version "6"; transcript_id "ENST00000391707"; transcript_version "7"; gene_name "LINC00685"; gene_source "havana"; gene_biotype "antisense"; havana_gene "OTTHUMG00000021049"; havana_gene_version "1"; transcript_name "LINC00685-001"; transcript_source "havana"; transcript_biotype "antisense"; havana_transcript "OTTHUMT00000055574"; havana_transcript_version "1"; tag "basic"; transcript_support_level "5 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
190 X havana exon 320990 321248 . + . gene_id "ENSG00000226179"; gene_version "6"; transcript_id "ENST00000391707"; transcript_version "7"; exon_number "1"; gene_name "LINC00685"; gene_source "havana"; gene_biotype "antisense"; havana_gene "OTTHUMG00000021049"; havana_gene_version "1"; transcript_name "LINC00685-001"; transcript_source "havana"; transcript_biotype "antisense"; havana_transcript "OTTHUMT00000055574"; havana_transcript_version "1"; exon_id "ENSE00001675006"; exon_version "1"; tag "basic"; transcript_support_level "5 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
191 X havana exon 321683 321851 . + . gene_id "ENSG00000226179"; gene_version "6"; transcript_id "ENST00000391707"; transcript_version "7"; exon_number "2"; gene_name "LINC00685"; gene_source "havana"; gene_biotype "antisense"; havana_gene "OTTHUMG00000021049"; havana_gene_version "1"; transcript_name "LINC00685-001"; transcript_source "havana"; transcript_biotype "antisense"; havana_transcript "OTTHUMT00000055574"; havana_transcript_version "1"; exon_id "ENSE00001778583"; exon_version "1"; tag "basic"; transcript_support_level "5 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
192 X ensembl_havana gene 333963 386955 . - . gene_id "ENSG00000167393"; gene_version "17"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
193 X ensembl_havana transcript 333963 386710 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000390665"; transcript_version "8"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14104"; havana_transcript "OTTHUMT00000055577"; havana_transcript_version "2"; tag "basic"; transcript_support_level "1 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
194 X ensembl_havana exon 386368 386710 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000390665"; transcript_version "8"; exon_number "1"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14104"; havana_transcript "OTTHUMT00000055577"; havana_transcript_version "2"; exon_id "ENSE00001912068"; exon_version "1"; tag "basic"; transcript_support_level "1 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
195 X ensembl_havana CDS 386368 386691 . - 0 gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000390665"; transcript_version "8"; exon_number "1"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14104"; havana_transcript "OTTHUMT00000055577"; havana_transcript_version "2"; protein_id "ENSP00000375080"; protein_version "3"; tag "basic"; transcript_support_level "1 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
196 X ensembl_havana start_codon 386689 386691 . - 0 gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000390665"; transcript_version "8"; exon_number "1"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14104"; havana_transcript "OTTHUMT00000055577"; havana_transcript_version "2"; tag "basic"; transcript_support_level "1 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
197 X ensembl_havana exon 361405 361590 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000390665"; transcript_version "8"; exon_number "2"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14104"; havana_transcript "OTTHUMT00000055577"; havana_transcript_version "2"; exon_id "ENSE00003653358"; exon_version "1"; tag "basic"; transcript_support_level "1 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
198 X ensembl_havana CDS 361405 361590 . - 0 gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000390665"; transcript_version "8"; exon_number "2"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14104"; havana_transcript "OTTHUMT00000055577"; havana_transcript_version "2"; protein_id "ENSP00000375080"; protein_version "3"; tag "basic"; transcript_support_level "1 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
199 X ensembl_havana exon 347590 347693 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000390665"; transcript_version "8"; exon_number "3"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14104"; havana_transcript "OTTHUMT00000055577"; havana_transcript_version "2"; exon_id "ENSE00003509428"; exon_version "1"; tag "basic"; transcript_support_level "1 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
200 X ensembl_havana CDS 347590 347693 . - 0 gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000390665"; transcript_version "8"; exon_number "3"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14104"; havana_transcript "OTTHUMT00000055577"; havana_transcript_version "2"; protein_id "ENSP00000375080"; protein_version "3"; tag "basic"; transcript_support_level "1 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
201 X ensembl_havana exon 347234 347336 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000390665"; transcript_version "8"; exon_number "4"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14104"; havana_transcript "OTTHUMT00000055577"; havana_transcript_version "2"; exon_id "ENSE00003492683"; exon_version "1"; tag "basic"; transcript_support_level "1 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
202 X ensembl_havana CDS 347234 347336 . - 1 gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000390665"; transcript_version "8"; exon_number "4"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14104"; havana_transcript "OTTHUMT00000055577"; havana_transcript_version "2"; protein_id "ENSP00000375080"; protein_version "3"; tag "basic"; transcript_support_level "1 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
203 X ensembl_havana exon 346701 346775 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000390665"; transcript_version "8"; exon_number "5"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14104"; havana_transcript "OTTHUMT00000055577"; havana_transcript_version "2"; exon_id "ENSE00003489026"; exon_version "1"; tag "basic"; transcript_support_level "1 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
204 X ensembl_havana CDS 346701 346775 . - 0 gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000390665"; transcript_version "8"; exon_number "5"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14104"; havana_transcript "OTTHUMT00000055577"; havana_transcript_version "2"; protein_id "ENSP00000375080"; protein_version "3"; tag "basic"; transcript_support_level "1 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
205 X ensembl_havana exon 346174 346260 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000390665"; transcript_version "8"; exon_number "6"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14104"; havana_transcript "OTTHUMT00000055577"; havana_transcript_version "2"; exon_id "ENSE00003574906"; exon_version "1"; tag "basic"; transcript_support_level "1 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
206 X ensembl_havana CDS 346174 346260 . - 0 gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000390665"; transcript_version "8"; exon_number "6"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14104"; havana_transcript "OTTHUMT00000055577"; havana_transcript_version "2"; protein_id "ENSP00000375080"; protein_version "3"; tag "basic"; transcript_support_level "1 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
207 X ensembl_havana exon 345516 345672 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000390665"; transcript_version "8"; exon_number "7"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14104"; havana_transcript "OTTHUMT00000055577"; havana_transcript_version "2"; exon_id "ENSE00003687848"; exon_version "1"; tag "basic"; transcript_support_level "1 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
208 X ensembl_havana CDS 345516 345672 . - 0 gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000390665"; transcript_version "8"; exon_number "7"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14104"; havana_transcript "OTTHUMT00000055577"; havana_transcript_version "2"; protein_id "ENSP00000375080"; protein_version "3"; tag "basic"; transcript_support_level "1 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
209 X ensembl_havana exon 341883 341931 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000390665"; transcript_version "8"; exon_number "8"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14104"; havana_transcript "OTTHUMT00000055577"; havana_transcript_version "2"; exon_id "ENSE00003511595"; exon_version "1"; tag "basic"; transcript_support_level "1 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
210 X ensembl_havana CDS 341883 341931 . - 2 gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000390665"; transcript_version "8"; exon_number "8"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14104"; havana_transcript "OTTHUMT00000055577"; havana_transcript_version "2"; protein_id "ENSP00000375080"; protein_version "3"; tag "basic"; transcript_support_level "1 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
211 X ensembl_havana exon 341307 341396 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000390665"; transcript_version "8"; exon_number "9"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14104"; havana_transcript "OTTHUMT00000055577"; havana_transcript_version "2"; exon_id "ENSE00003587700"; exon_version "1"; tag "basic"; transcript_support_level "1 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
212 X ensembl_havana CDS 341307 341396 . - 1 gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000390665"; transcript_version "8"; exon_number "9"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14104"; havana_transcript "OTTHUMT00000055577"; havana_transcript_version "2"; protein_id "ENSP00000375080"; protein_version "3"; tag "basic"; transcript_support_level "1 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
213 X ensembl_havana exon 340765 340940 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000390665"; transcript_version "8"; exon_number "10"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14104"; havana_transcript "OTTHUMT00000055577"; havana_transcript_version "2"; exon_id "ENSE00003668507"; exon_version "1"; tag "basic"; transcript_support_level "1 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
214 X ensembl_havana CDS 340765 340940 . - 1 gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000390665"; transcript_version "8"; exon_number "10"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14104"; havana_transcript "OTTHUMT00000055577"; havana_transcript_version "2"; protein_id "ENSP00000375080"; protein_version "3"; tag "basic"; transcript_support_level "1 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
215 X ensembl_havana exon 338778 338896 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000390665"; transcript_version "8"; exon_number "11"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14104"; havana_transcript "OTTHUMT00000055577"; havana_transcript_version "2"; exon_id "ENSE00003622978"; exon_version "1"; tag "basic"; transcript_support_level "1 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
216 X ensembl_havana CDS 338778 338896 . - 2 gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000390665"; transcript_version "8"; exon_number "11"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14104"; havana_transcript "OTTHUMT00000055577"; havana_transcript_version "2"; protein_id "ENSP00000375080"; protein_version "3"; tag "basic"; transcript_support_level "1 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
217 X ensembl_havana exon 338604 338710 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000390665"; transcript_version "8"; exon_number "12"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14104"; havana_transcript "OTTHUMT00000055577"; havana_transcript_version "2"; exon_id "ENSE00003501875"; exon_version "1"; tag "basic"; transcript_support_level "1 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
218 X ensembl_havana CDS 338604 338710 . - 0 gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000390665"; transcript_version "8"; exon_number "12"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14104"; havana_transcript "OTTHUMT00000055577"; havana_transcript_version "2"; protein_id "ENSP00000375080"; protein_version "3"; tag "basic"; transcript_support_level "1 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
219 X ensembl_havana exon 333963 334517 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000390665"; transcript_version "8"; exon_number "13"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14104"; havana_transcript "OTTHUMT00000055577"; havana_transcript_version "2"; exon_id "ENSE00001844596"; exon_version "1"; tag "basic"; transcript_support_level "1 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
220 X ensembl_havana CDS 334370 334517 . - 1 gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000390665"; transcript_version "8"; exon_number "13"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14104"; havana_transcript "OTTHUMT00000055577"; havana_transcript_version "2"; protein_id "ENSP00000375080"; protein_version "3"; tag "basic"; transcript_support_level "1 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
221 X ensembl_havana stop_codon 334367 334369 . - 0 gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000390665"; transcript_version "8"; exon_number "13"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14104"; havana_transcript "OTTHUMT00000055577"; havana_transcript_version "2"; tag "basic"; transcript_support_level "1 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
222 X ensembl_havana five_prime_utr 386692 386710 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000390665"; transcript_version "8"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14104"; havana_transcript "OTTHUMT00000055577"; havana_transcript_version "2"; tag "basic"; transcript_support_level "1 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
223 X ensembl_havana three_prime_utr 333963 334366 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000390665"; transcript_version "8"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14104"; havana_transcript "OTTHUMT00000055577"; havana_transcript_version "2"; tag "basic"; transcript_support_level "1 (assigned to previous version 7)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
224 X havana transcript 334235 341711 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000479438"; transcript_version "6"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-008"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000354555"; havana_transcript_version "1"; transcript_support_level "2 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
225 X havana exon 341307 341711 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000479438"; transcript_version "6"; exon_number "1"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-008"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000354555"; havana_transcript_version "1"; exon_id "ENSE00001918099"; exon_version "1"; transcript_support_level "2 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
226 X havana exon 340765 340940 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000479438"; transcript_version "6"; exon_number "2"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-008"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000354555"; havana_transcript_version "1"; exon_id "ENSE00003553826"; exon_version "1"; transcript_support_level "2 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
227 X havana exon 338778 338896 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000479438"; transcript_version "6"; exon_number "3"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-008"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000354555"; havana_transcript_version "1"; exon_id "ENSE00003592960"; exon_version "1"; transcript_support_level "2 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
228 X havana exon 338604 338710 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000479438"; transcript_version "6"; exon_number "4"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-008"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000354555"; havana_transcript_version "1"; exon_id "ENSE00003534283"; exon_version "1"; transcript_support_level "2 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
229 X havana exon 334235 334517 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000479438"; transcript_version "6"; exon_number "5"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-008"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000354555"; havana_transcript_version "1"; exon_id "ENSE00001489278"; exon_version "1"; transcript_support_level "2 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
230 X havana transcript 334239 347324 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000477110"; transcript_version "6"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-003"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000055583"; havana_transcript_version "2"; transcript_support_level "1 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
231 X havana exon 347234 347324 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000477110"; transcript_version "6"; exon_number "1"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-003"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000055583"; havana_transcript_version "2"; exon_id "ENSE00001716328"; exon_version "2"; transcript_support_level "1 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
232 X havana exon 346701 346775 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000477110"; transcript_version "6"; exon_number "2"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-003"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000055583"; havana_transcript_version "2"; exon_id "ENSE00003571094"; exon_version "1"; transcript_support_level "1 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
233 X havana exon 346174 346260 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000477110"; transcript_version "6"; exon_number "3"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-003"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000055583"; havana_transcript_version "2"; exon_id "ENSE00003477290"; exon_version "1"; transcript_support_level "1 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
234 X havana exon 345516 345672 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000477110"; transcript_version "6"; exon_number "4"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-003"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000055583"; havana_transcript_version "2"; exon_id "ENSE00003641725"; exon_version "1"; transcript_support_level "1 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
235 X havana exon 341307 341931 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000477110"; transcript_version "6"; exon_number "5"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-003"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000055583"; havana_transcript_version "2"; exon_id "ENSE00001915623"; exon_version "1"; transcript_support_level "1 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
236 X havana exon 340765 340940 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000477110"; transcript_version "6"; exon_number "6"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-003"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000055583"; havana_transcript_version "2"; exon_id "ENSE00003553826"; exon_version "1"; transcript_support_level "1 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
237 X havana exon 338778 338896 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000477110"; transcript_version "6"; exon_number "7"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-003"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000055583"; havana_transcript_version "2"; exon_id "ENSE00003592960"; exon_version "1"; transcript_support_level "1 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
238 X havana exon 334239 338710 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000477110"; transcript_version "6"; exon_number "8"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-003"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000055583"; havana_transcript_version "2"; exon_id "ENSE00001815257"; exon_version "1"; transcript_support_level "1 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
239 X havana transcript 338613 345629 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000468169"; transcript_version "6"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-006"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000055585"; havana_transcript_version "1"; transcript_support_level "3 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
240 X havana exon 345516 345629 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000468169"; transcript_version "6"; exon_number "1"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-006"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000055585"; havana_transcript_version "1"; exon_id "ENSE00001890387"; exon_version "1"; transcript_support_level "3 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
241 X havana exon 341883 341931 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000468169"; transcript_version "6"; exon_number "2"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-006"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000055585"; havana_transcript_version "1"; exon_id "ENSE00003555172"; exon_version "1"; transcript_support_level "3 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
242 X havana exon 341307 341396 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000468169"; transcript_version "6"; exon_number "3"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-006"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000055585"; havana_transcript_version "1"; exon_id "ENSE00003689816"; exon_version "1"; transcript_support_level "3 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
243 X havana exon 340765 340940 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000468169"; transcript_version "6"; exon_number "4"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-006"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000055585"; havana_transcript_version "1"; exon_id "ENSE00003553826"; exon_version "1"; transcript_support_level "3 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
244 X havana exon 338613 338896 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000468169"; transcript_version "6"; exon_number "5"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-006"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000055585"; havana_transcript_version "1"; exon_id "ENSE00001951758"; exon_version "1"; transcript_support_level "3 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
245 X havana transcript 340765 345626 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000484364"; transcript_version "6"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-004"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000055580"; havana_transcript_version "1"; transcript_support_level "2 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
246 X havana exon 345516 345626 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000484364"; transcript_version "6"; exon_number "1"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-004"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000055580"; havana_transcript_version "1"; exon_id "ENSE00001888244"; exon_version "1"; transcript_support_level "2 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
247 X havana exon 341883 342237 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000484364"; transcript_version "6"; exon_number "2"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-004"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000055580"; havana_transcript_version "1"; exon_id "ENSE00001815626"; exon_version "1"; transcript_support_level "2 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
248 X havana exon 341307 341396 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000484364"; transcript_version "6"; exon_number "3"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-004"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000055580"; havana_transcript_version "1"; exon_id "ENSE00003689816"; exon_version "1"; transcript_support_level "2 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
249 X havana exon 340765 340940 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000484364"; transcript_version "6"; exon_number "4"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-004"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000055580"; havana_transcript_version "1"; exon_id "ENSE00003553826"; exon_version "1"; transcript_support_level "2 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
250 X havana transcript 341911 346514 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000477636"; transcript_version "6"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-005"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000055581"; havana_transcript_version "1"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
251 X havana exon 346174 346514 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000477636"; transcript_version "6"; exon_number "1"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-005"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000055581"; havana_transcript_version "1"; exon_id "ENSE00001896157"; exon_version "1"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
252 X havana exon 345516 345672 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000477636"; transcript_version "6"; exon_number "2"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-005"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000055581"; havana_transcript_version "1"; exon_id "ENSE00003641725"; exon_version "1"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
253 X havana exon 341911 341931 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000477636"; transcript_version "6"; exon_number "3"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-005"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000055581"; havana_transcript_version "1"; exon_id "ENSE00001911121"; exon_version "1"; transcript_support_level "5 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
254 X havana transcript 344896 386955 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000445792"; transcript_version "7"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-007"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000354554"; havana_transcript_version "1"; transcript_support_level "2 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
255 X havana exon 386368 386955 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000445792"; transcript_version "7"; exon_number "1"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-007"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000354554"; havana_transcript_version "1"; exon_id "ENSE00001912680"; exon_version "1"; transcript_support_level "2 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
256 X havana exon 362255 362332 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000445792"; transcript_version "7"; exon_number "2"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-007"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000354554"; havana_transcript_version "1"; exon_id "ENSE00001847312"; exon_version "1"; transcript_support_level "2 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
257 X havana exon 361405 361590 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000445792"; transcript_version "7"; exon_number "3"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-007"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000354554"; havana_transcript_version "1"; exon_id "ENSE00003585491"; exon_version "1"; transcript_support_level "2 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
258 X havana exon 347590 347693 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000445792"; transcript_version "7"; exon_number "4"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-007"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000354554"; havana_transcript_version "1"; exon_id "ENSE00003475055"; exon_version "1"; transcript_support_level "2 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
259 X havana exon 347234 347336 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000445792"; transcript_version "7"; exon_number "5"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-007"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000354554"; havana_transcript_version "1"; exon_id "ENSE00003606316"; exon_version "1"; transcript_support_level "2 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
260 X havana exon 346701 346775 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000445792"; transcript_version "7"; exon_number "6"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-007"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000354554"; havana_transcript_version "1"; exon_id "ENSE00003571094"; exon_version "1"; transcript_support_level "2 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
261 X havana exon 346174 346260 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000445792"; transcript_version "7"; exon_number "7"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-007"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000354554"; havana_transcript_version "1"; exon_id "ENSE00003477290"; exon_version "1"; transcript_support_level "2 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
262 X havana exon 344896 345672 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000445792"; transcript_version "7"; exon_number "8"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-007"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000354554"; havana_transcript_version "1"; exon_id "ENSE00001950030"; exon_version "1"; transcript_support_level "2 (assigned to previous version 6)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
263 X havana transcript 346637 361516 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000496630"; transcript_version "6"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-010"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000354557"; havana_transcript_version "1"; transcript_support_level "2 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
264 X havana exon 361405 361516 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000496630"; transcript_version "6"; exon_number "1"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-010"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000354557"; havana_transcript_version "1"; exon_id "ENSE00001916804"; exon_version "1"; transcript_support_level "2 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
265 X havana exon 347590 347693 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000496630"; transcript_version "6"; exon_number "2"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-010"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000354557"; havana_transcript_version "1"; exon_id "ENSE00003475055"; exon_version "1"; transcript_support_level "2 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
266 X havana exon 347234 347336 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000496630"; transcript_version "6"; exon_number "3"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-010"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000354557"; havana_transcript_version "1"; exon_id "ENSE00003606316"; exon_version "1"; transcript_support_level "2 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
267 X havana exon 346637 346775 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000496630"; transcript_version "6"; exon_number "4"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-010"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000354557"; havana_transcript_version "1"; exon_id "ENSE00001851476"; exon_version "1"; transcript_support_level "2 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
268 X havana transcript 346720 347838 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000475859"; transcript_version "6"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-009"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000354556"; havana_transcript_version "1"; transcript_support_level "2 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
269 X havana exon 347590 347838 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000475859"; transcript_version "6"; exon_number "1"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-009"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000354556"; havana_transcript_version "1"; exon_id "ENSE00001843788"; exon_version "1"; transcript_support_level "2 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
270 X havana exon 347234 347336 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000475859"; transcript_version "6"; exon_number "2"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-009"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000354556"; havana_transcript_version "1"; exon_id "ENSE00003606316"; exon_version "1"; transcript_support_level "2 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
271 X havana exon 346720 346775 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000475859"; transcript_version "6"; exon_number "3"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-009"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTHUMT00000354556"; havana_transcript_version "1"; exon_id "ENSE00001849084"; exon_version "1"; transcript_support_level "2 (assigned to previous version 5)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
272 X havana transcript 347611 374044 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000381625"; transcript_version "9"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-002"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000055578"; havana_transcript_version "3"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5 (assigned to previous version 8)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
273 X havana exon 373532 374044 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000381625"; transcript_version "9"; exon_number "1"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-002"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000055578"; havana_transcript_version "3"; exon_id "ENSE00001489321"; exon_version "3"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5 (assigned to previous version 8)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
274 X havana CDS 373532 373771 . - 0 gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000381625"; transcript_version "9"; exon_number "1"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-002"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000055578"; havana_transcript_version "3"; protein_id "ENSP00000371038"; protein_version "4"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5 (assigned to previous version 8)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
275 X havana start_codon 373769 373771 . - 0 gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000381625"; transcript_version "9"; exon_number "1"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-002"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000055578"; havana_transcript_version "3"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5 (assigned to previous version 8)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
276 X havana exon 361405 361590 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000381625"; transcript_version "9"; exon_number "2"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-002"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000055578"; havana_transcript_version "3"; exon_id "ENSE00003653358"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5 (assigned to previous version 8)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
277 X havana CDS 361405 361590 . - 0 gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000381625"; transcript_version "9"; exon_number "2"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-002"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000055578"; havana_transcript_version "3"; protein_id "ENSP00000371038"; protein_version "4"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5 (assigned to previous version 8)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
278 X havana exon 347611 347693 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000381625"; transcript_version "9"; exon_number "3"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-002"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000055578"; havana_transcript_version "3"; exon_id "ENSE00001877883"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5 (assigned to previous version 8)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
279 X havana CDS 347611 347693 . - 0 gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000381625"; transcript_version "9"; exon_number "3"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-002"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000055578"; havana_transcript_version "3"; protein_id "ENSP00000371038"; protein_version "4"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5 (assigned to previous version 8)";
9f4ea174ce3d planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/ensembl_variant_report commit e6aa05bbbee3cc7d98f16354fc41c674f439ff1b-dirty
jjohnson
parents:
diff changeset
280 X havana five_prime_utr 373772 374044 . - . gene_id "ENSG00000167393"; gene_version "17"; transcript_id "ENST00000381625"; transcript_version "9"; gene_name "PPP2R3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTHUMG00000021052"; havana_gene_version "3"; transcript_name "PPP2R3B-002"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTHUMT00000055578"; havana_transcript_version "3"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5 (assigned to previous version 8)";