Mercurial > repos > jjohnson > fastq_mcf

diff test-data/test_mcf_reads.fq @ 1:b61f1466ce8f default tip

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Add tool_dependencies.xml and test case
author Jim Johnson <jj@umn.edu>
date Mon, 01 Apr 2013 10:28:17 -0500
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test_mcf_reads.fq	Mon Apr 01 10:28:17 2013 -0500
@@ -0,0 +1,20 @@
+@3VFXHS1:278:D13Y4ACXX:1:1101:1472:2209 1:N:0:CGATGT
+CTGGTATTGTCTCTTCCCACACTGAACTCTGGGGAATTCGATGTGTGGCACAGCCCGGCTCAGCCTGCCCGCTGGTGGGAGCCCCTGGGAAGCTGCGGCGC
++
+@@CFDDFFGH>CAEH:CGHIJJJJEIHJJHIJJJ?DHIDIJHGEGHJG;FHC9@B(5@6A=EH:B@B@2=>>B?BDCBD<B52<<ABD?<?B1@A9>B###
+@3VFXHS1:278:D13Y4ACXX:1:1101:1434:2224 1:N:0:CGATGT
+GGCAGAGCCAATCTTCGGACGTGGTGATTGTCTCCTCTAAGTACAAACAGCGCTATGAGTGTCGCCTGCCAGCTGGAGCTATTCACTTCCAGCGTGAAAGG
++
+BC@FFFFFHHHGFHIIJJIJGFHICFCGIHGFHFGGCHD@F?B?BGGHJJIG6D@EHEHHEHCD259?AACD@AC59?,(5>A,;>:@C(::(029?8>@A
+@3VFXHS1:278:D13Y4ACXX:1:1101:1712:2247 1:N:0:CGATGT
+GTACACTTGAACACATTTTTCTAACCTTAGAAAATACCTACAAGGCCTGTTGTCTTGACCCATTACTCAATTGTCCCTGGCATATTATCTGATCTTCACGT
++
+CCCFFFFFHHHHGJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJIJGIIJGGGDHHHIHIHHEIJIJJIIGGIIIIFEHHHHFEFFFDEEEDCEEEDEDC?A
+@3VFXHS1:278:D13Y4ACXX:1:1101:3318:2215 1:N:0:CGATGT
+AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGAAAAAAAAACAAGCGACAAGGACAGA
++
+CCCFFFFFHHHHHJJJJJIJJJJJJJJJIJGHFFHIAHIFGGIIJJIJJFIJIHJIHHHGEGFE>CFFEB###############################
+@3VFXHS1:278:D13Y4ACXX:2:1101:5344:2243 1:N:0:ACAGTG
+GATCGGAAGAGCACACGTCTGAACTCCAGTCACACAGTGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAACAACAGAAAAAACAAAGCGCGAACAGTGC
++
+CCCFFFFFHHHHHJIJJIJIJHJJJJJJJHIGIGIHJFHFFDIIJGIIIJJJHHFIJJJJJJHCEHHFD################################