Mercurial > repos > jjohnson > fastq_mcf

diff test-data/test_mcf_mates.fq @ 1:b61f1466ce8f default tip

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Add tool_dependencies.xml and test case
author Jim Johnson <jj@umn.edu>
date Mon, 01 Apr 2013 10:28:17 -0500
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test_mcf_mates.fq	Mon Apr 01 10:28:17 2013 -0500
@@ -0,0 +1,20 @@
+@3VFXHS1:278:D13Y4ACXX:1:1101:1472:2209 2:N:0:CGATGT
+CTGGATTTGAAATCTTTAGCGGAGCGGGAACGCCGGCGCGGAAGGGTCTCTACACAGGGCCCGGTCCGCCCTTGCGCTCTCCTTAATGNNNNNNNNNNCGC
++
+@CCF?EFFHHHGHHHIFGI@HGGIEHIGIJGI6@@E>B8>??:DBD++399>ACCDDDD@DBDD58@BBDDDDD@@<@BDDDDC>CDC#############
+@3VFXHS1:278:D13Y4ACXX:1:1101:1434:2224 2:N:0:CGATGT
+CCCGGGGCCTCCCATTAAGGTCGCACTTGGACCCATTGCCATAGGTCTGGCTGTGGTAGCGTTTAAGACGATGCTGCTTGGAGGCCTTGGCTGTTTCATCA
++
+BCCFFFFDHFFHGIHIHGJJIJJGGIIJJJIDHGJIJEIIIIIJJIIJIJHHHEEF;>DDA>BBB@CAABBBDDCDDDDDDAD@@?CDDDCCB?ACCDDC#
+@3VFXHS1:278:D13Y4ACXX:1:1101:1712:2247 2:N:0:CGATGT
+GTTACTCAGCATTTATTCATGCCTGCTGTGTACGGAAAGGGCAGTTACAAAGGAAAGCCTTGATGATTCTGCTTCCAAGAAACGTGAAGATCAGATAATAT
++
+CBCFFFFFHHHHHJIJJIIJJJJJIIJIHIHIJJJIJIJIJJIIIIIIJJGGIIJJJIJJJJHIJJJJHIJHGHHHHFFFFFEDECBDDDDDCCDDDCDEE
+@3VFXHS1:278:D13Y4ACXX:1:1101:3318:2215 2:N:0:CGATGT
+AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAAAAAAAAAAAAAAACAGAAAAAGAAAGAAGGAAAGGNGAGT
++
+CCCFFFFFHHHHHJJJJFHHHJJJIJJGGIDGHIEIJJJIIJGIJ5@FHIB?DFFEEEDEEEDD?####################################
+@3VFXHS1:278:D13Y4ACXX:2:1101:5344:2243 2:N:0:ACAGTG
+GGATCGGGAAAGGGGGGGGGGGGGGAAAAGGGGGGATTTCCGGGGGGGCCGGTTCTTTTAAAAAAAAAAAAAAAGAAAACAGAAACAGAAGATGGACAACA
++
+CCCFFFFFHHHHHJJJJFHHHJJJIJJGGIDGHIEIJJJIIJGIJ5@FHIB?DFFEEEDEEEDD?####################################