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annotate test-data/human_peptides.tabular @ 2:c4fd2ea4f988

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Add the option to test the reversed sequence and the DNA reverse complement of the sequence (ignored if the sequence cannot be interpreted as DNA)
author Jim Johnson <jj@umn.edu>
date Thu, 13 Nov 2014 14:09:50 -0600
parents e7e56b51d156
children
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e7e56b51d156 Uploaded
jjohnson
parents:
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1 pep_1|sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1 MHPAVFLSLPDLRCSLLLL
e7e56b51d156 Uploaded
jjohnson
parents:
diff changeset
2 pep_2|sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1 NENQVVFARVDCDQHSDIAQRYRISKY
e7e56b51d156 Uploaded
jjohnson
parents:
diff changeset
3 pep_3|sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1 FQKLAPSEYRYTLLRDRDEL
e7e56b51d156 Uploaded
jjohnson
parents:
diff changeset
4 pep_4|sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1 LLILVTWVFTPVTTEITSLDTE
e7e56b51d156 Uploaded
jjohnson
parents:
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5 pep_5|sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4 INGQFVERCWT
e7e56b51d156 Uploaded
jjohnson
parents:
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6 pep_6|sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4 YALVSLSFFRKLRLIRLET
e7e56b51d156 Uploaded
jjohnson
parents:
diff changeset
7 pep_7|sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1 MNGTEGPNFYVPFSNA
e7e56b51d156 Uploaded
jjohnson
parents:
diff changeset
8 pep_8|sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1 YNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA