Mercurial > repos > jjohnson > gmap
diff tool-data/gmap_indices.loc.sample @ 11:6adc485b6dc0 draft default tip
Uploaded
author | jjohnson |
---|---|
date | Tue, 31 Jul 2012 08:19:46 -0400 |
parents | 93911bac43da |
children |
line wrap: on
line diff
--- a/tool-data/gmap_indices.loc.sample Thu Jan 05 14:31:24 2012 -0600 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,10 +0,0 @@ -#This is a sample file distributed with Galaxy that enables tools -#to use a directory of GMAPDB indexed sequences data files. You will need -#to create these data files using gmap_build and then create a gmap_indices.loc file -#similar to this one (store it in this directory) that points to -#the directories in which those files are stored. The gmap_indices.loc -#file has this format (white space characters are TAB characters): -# -#<unique_build_id> <dbkey> <display_name> <kmers> <map,map> <snp,snp> <file_base_path> -#hg18 hg18 hg18 (cmet atoi) 12,13,14,15 splicesites,introns snps /depot/data2/galaxy/gmap/hg18 -#hg19 hg19 hg19 (cmet atoi) 12,13,14,15 splicesites,introns,snps snps,dbsnp /depot/data2/galaxy/gmap/hg19