# HG changeset patch
# User Jim Johnson <jj@umn.edu>
# Date 1366581138 18000
# Node ID 6c284cb55352a7bb119a98db1a3104dda2d987e8
# Parent  0b3a14a7b5f1dbfd492fef8bb28e5df277f3fafd
Update SnpEff-cds-report to version 1.1

diff -r 0b3a14a7b5f1 -r 6c284cb55352 Galaxy-Workflow-MMuFF_v1.2.ga
--- a/Galaxy-Workflow-MMuFF_v1.2.ga	Fri Apr 12 09:30:08 2013 -0500
+++ b/Galaxy-Workflow-MMuFF_v1.2.ga	Sun Apr 21 16:52:18 2013 -0500
@@ -18,7 +18,7 @@
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@@ -41,7 +41,7 @@
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@@ -64,7 +64,7 @@
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@@ -87,7 +87,7 @@
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@@ -120,7 +120,7 @@
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@@ -154,7 +154,7 @@
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@@ -199,7 +199,7 @@
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@@ -226,7 +226,7 @@
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         "7": {
-            "annotation": "Keep only mappings with MAPQ of 255", 
+            "annotation": "Keep only unique mappings - MAPQ of 255\n(255 is the value tophat uses to indicate that reads are uniquely mapped in the genome)", 
             "id": 7, 
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@@ -244,7 +244,7 @@
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@@ -279,7 +279,7 @@
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@@ -308,7 +308,7 @@
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@@ -337,7 +337,7 @@
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@@ -376,7 +376,7 @@
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@@ -442,7 +442,7 @@
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@@ -485,7 +485,7 @@
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@@ -524,7 +524,7 @@
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@@ -568,7 +568,7 @@
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@@ -788,7 +788,7 @@
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@@ -853,8 +853,8 @@
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@@ -874,9 +874,9 @@
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+            "tool_id": "toolshed.g2.bx.psu.edu/repos/jjohnson/snpeff_cds_report/SnpEff-cds-report/1.0", 
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@@ -906,30 +906,20 @@
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