Mercurial > repos > jjohnson > package_snpeff_3_2

comparison tool_dependencies.xml @ 0:8081a3ff0d87 draft default tip

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author jjohnson
date Wed, 18 Sep 2013 11:42:18 -0400
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-1:000000000000 0:8081a3ff0d87
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <package name="snpEff" version="3.2">
4 <install version="1.0">
5 <actions>
6 <action type="download_by_url">http://sourceforge.net/projects/snpeff/files/snpEff_v3_2_core.zip</action>
7 <action type="move_directory_files">
8 <source_directory>.</source_directory>
9 <destination_directory>$INSTALL_DIR</destination_directory>
10 </action>
11 <action type="set_environment">
12 <environment_variable name="SNPEFF_JAR_PATH" action="set_to">$INSTALL_DIR</environment_variable>
13 </action>
14 <action type="set_environment">
15 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/scripts</environment_variable>
16 </action>
17 </actions>
18 </install>
19 <readme>
20 </readme>
21 </package>
22 </tool_dependency>
23