Mercurial > repos > jjohnson > pandas_pivot_table
comparison pandas_pivot_table.xml @ 2:6f05390deffa draft
"planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/pandas_pivot_table/ commit 1ca7433aaa606c636f796c75b6cfd8a080e2d5bc-dirty"
author | jjohnson |
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date | Wed, 16 Dec 2020 17:44:58 +0000 |
parents | 621144f8dbe9 |
children | 4b65133e0722 |
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1:c02f59711eb6 | 2:6f05390deffa |
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18 #end if | 18 #end if |
19 --index '$pvt_index' | 19 --index '$pvt_index' |
20 --columns '$pvt_columns' | 20 --columns '$pvt_columns' |
21 --values '$pvt_values' | 21 --values '$pvt_values' |
22 --aggfunc='$aggfunc' | 22 --aggfunc='$aggfunc' |
23 #if $fill_value | |
24 --fill_value '$fill_value' | |
25 #end if | |
26 #if $float_format | |
27 --float_format '$float_format' | |
28 #end if | |
23 --input '$input' | 29 --input '$input' |
24 --output '$output' | 30 --output '$output' |
25 ]]></command> | 31 ]]></command> |
26 <inputs> | 32 <inputs> |
27 <param name="input" type="data" format="tabular" label="Tabular table for pivot transformation"/> | 33 <param name="input" type="data" format="tabular" label="Tabular table for pivot transformation"/> |
56 <param name="aggfunc" type="text" value="" label="Pivot table aggregate function"> | 62 <param name="aggfunc" type="text" value="" label="Pivot table aggregate function"> |
57 <help><![CDATA[A valid JSON string, e.g.: | 63 <help><![CDATA[A valid JSON string, e.g.: |
58 <ul> | 64 <ul> |
59 <li>A single function applied to each <i>value</i> column: <b>"min"</b></li> | 65 <li>A single function applied to each <i>value</i> column: <b>"min"</b></li> |
60 <li>An array of functions applied to each <i>value</i> column: <b>["min", "max", "mean", "std"]</b></li> | 66 <li>An array of functions applied to each <i>value</i> column: <b>["min", "max", "mean", "std"]</b></li> |
61 <li>A dictionary of <i>value column : functions</i>: <b>{"A" : "sum", "B" : ["min", "max"]}</b></li> | 67 <li>A dictionary of <i>value column : function(s)</i>: <b>{"A" : "sum", "B" : ["min", "max"]}</b></li> |
62 </ul> | 68 </ul> |
63 ]]></help> | 69 ]]></help> |
70 <validator type="regex" message="Do not forget the double quotes">.*".+".*</validator> | |
64 <sanitizer> | 71 <sanitizer> |
65 <valid initial="string.printable"> | 72 <valid initial="string.printable"> |
66 <remove value="'"/> | 73 <remove value="'"/> |
67 </valid> | 74 </valid> |
68 <mapping initial="none"> | 75 <mapping initial="none"> |
69 <add source="'" target="__sq__"/> | 76 <add source="'" target="__sq__"/> |
70 </mapping> | 77 </mapping> |
78 </sanitizer> | |
79 </param> | |
80 <param name="fill_value" type="text" value="" optional="true" label="Fill value (optional)" | |
81 help="Value to replace missing values with (in the resulting pivot table, after aggregation) default is an empty field"/> | |
82 <param name="float_format" type="text" value="" optional="true" label="Output floating point format (optional)"> | |
83 <help>Default is six decimal places: %0.6f</help> | |
84 <validator type="regex" message="">^%\d+.\d+[fFeEgGn]$</validator> | |
85 <sanitizer> | |
86 <valid initial="string.digits"> | |
87 <add value="%" /> | |
88 <add value="." /> | |
89 <add value="f" /> | |
90 <add value="e" /> | |
91 <add value="g" /> | |
92 <add value="F" /> | |
93 <add value="E" /> | |
94 <add value="G" /> | |
95 <add value="n" /> | |
96 </valid> | |
71 </sanitizer> | 97 </sanitizer> |
72 </param> | 98 </param> |
73 </inputs> | 99 </inputs> |
74 <outputs> | 100 <outputs> |
75 <data name="output" format="tabular"/> | 101 <data name="output" format="tabular"/> |