Mercurial > repos > jjohnson > pileup_to_vcf

comparison test-data/test.pileup @ 0:3890f8ba0e4d

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author jjohnson
date Mon, 18 Feb 2013 11:32:50 -0500
parents
children bb0ac51f1b02
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equal deleted inserted replaced
-1:000000000000 0:3890f8ba0e4d
1 seq1 272 T 24 ,.$.....,,.,.,...,,,.,..^+. <<<+;<<<<<<<<<<<=<;<;7<&
2 seq1 273 T 23 ,.....,,.,.,...,,,.,..A <<<;<<<<<<<<<3<=<<<;<<+
3 seq1 274 T 23 ,.$....,,.,.,...,,,.,... 7<7;<;<<<<<<<<<=<;<;<<6
4 seq1 275 A 23 ,$....,,.,.,...,,,.,...^l. <+;9*<<<<<<<<<=<<:;<<<<
5 seq1 276 G 22 ...T,,.,.,...,,,.,.... 33;+<<7=7<<7<&<<1;<<6<
6 seq1 277 T 22 ....,,.,.,.C.,,,.,..G. +7<;<<<<<<<&<=<<:;<<&<
7 seq1 278 G 23 ....,,.,.,...,,,.,....^k. %38*<<;<7<<7<=<<<;<<<<<
8 seq1 279 C 23 A..T,,.,.,...,,,.,..... ;75&<<<<<<<<<=<<<9<<:<<
9 seq2 156 A 11 .$......+2AG.+2AG.+2AGGG <975;:<<<<<
10 seq3 200 A 20 ,,,,,..,.-4CACC.-4CACC....,.,,.^~. ==<<<<<<<<<<<::<;2<<
11 chr1 95935183 G 34 .,.,,,+1c,+1c.+1C,+1c,+1c.+1C.+1C.+1C,+1c.+1C,+1c,+1c.+1C,+1c,+1c.+1C,+1c.+1C.+1C,+1c,+1c,+1c.+1C.+1C.+1C.+1C.+1C^~c^~c IFEGIHIBIIIBAGIDI@IHCIIGHIHHEIIG!!
12 chr1 158571283 A 8 <,.c.c^~t^~c GIC#I#'!
13 chr6 125070485 C 216 <><<>>>>>>><<>>>><<<><<<<<>>>>><>>>>>><>>>>>>><><><>><><><>><>><<><<<>>>><<<>>>><<>>>><<<<<<<<<<<><<<<<<<><><<<<<><<<>><<<<<<<<>>>><<<<<<><><>>>>>>>>>>><<<<<<>><<<<>><><>>>>><>...,,,,,,,GGGGGGggggggGGGGggggggggg^~G^~g^~g^~g^~g IHHH:GFDH<H@IHCEIIIIHIIIDI#EACGGIEHB#HDHEBHGGDI?BHIEIIIGHBHIEDIIHHHIGHFIIDI<IIIIEEIIIIGAHIHEGGIBHBIHE;@CFIBHGGCDBGDGGGIIDC@GEAGDIHIIEEHBIIGIEGHIHHIHHHH2@G#>EBHICD@#GHHHFI9HII#I##AIIIE5@G!!!!!!!!!#!!!!!!!!$$!!$!$!#!!!