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diff fix_arb_fasta.xml @ 0:e5c3175506b7 default tip

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Initial tool configs for qiime, most need work.
author Jim Johnson <jj@umn.edu>
date Sun, 17 Jul 2011 10:30:11 -0500
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/fix_arb_fasta.xml	Sun Jul 17 10:30:11 2011 -0500
@@ -0,0 +1,25 @@
+<tool id="fix_arb_fasta" name="fix_arb_fasta" version="1.2.0">
+ <description>Reformat ARB FASTA files</description>
+ <requirements>
+  <requirement type="binary">fix_arb_fasta.py</requirement>
+ </requirements>
+ <command interpreter="python">
+  qiime_wrapper.py
+  --galaxy_tmpdir='$__new_file_path__'
+  fix_arb_fasta.py
+  --input_fasta_fp=$input_fasta_fp
+ </command>
+ <inputs>
+  <param name="input_fasta_fp" type="data" format="fasta" label="input_fasta_fp"
+   help="path to the input fasta file [REQUIRED]"/>
+ </inputs>
+ <outputs>
+  
+ </outputs>
+ <tests>
+ </tests>
+ <help>
+  
+ </help>
+</tool>
+